Pecora ANCESTRAL SPECIES 6 ENSGT00390000013481.c.a #7 ENSGT00390000002030 #8 ENSGT00940000161456 #9 ENSGT00730000111340 #10 ENSGT00940000157224 #11 ENSGT00940000158652 #12 ENSGT00530000064222.b #13 ENSGT00390000011854 #14 ENSGT00940000159561 #15 ENSGT00940000158237 #16 ENSGT00950000183050.b.a #17 ENSGT00390000013544 #18 ENSGT00940000155014 #19 ENSGT00390000012837 #20 ENSGT00390000006191 #21 ENSGT00390000005665 #22 ENSGT00390000001071 #23 ENSGT00390000008727.a.b #25 ENSGT00390000012816 #26 ENSGT00910000144250 #28 ENSGT00550000074912 #29 ENSGT00940000156159 #30 ENSGT00390000011698.c.b #31 ENSGT00940000160102 #32 ENSGT00390000012397 ENSGT00950000183181.B.a #33 ENSGT00940000164048.a ENSGT00940000156452 ENSGT00950000182998.A ENSGT00390000002032 ENSGT00390000018097 Percora_a ANCESTRAL SPECIES 8 ENSGT00390000013481.c.a #7 ENSGT00390000002030 #8 ENSGT00940000161456 #9 ENSGT00730000111340 #10 ENSGT00940000157224 #11 ENSGT00940000158652 #12 ENSGT00530000064222.b #13 ENSGT00390000011854 #14 ENSGT00940000159561 #15 ENSGT00940000158237 #16 ENSGT00950000183050.b.a #17 ENSGT00390000013544 #18 ENSGT00940000155014 #19 ENSGT00390000012837 #20 ENSGT00390000006191 #21 ENSGT00390000005665 #22 ENSGT00390000001071 #23 ENSGT00390000008727.a.b #25 ENSGT00390000012816 #26 ENSGT00910000144250 #28 ENSGT00550000074912 #29 ENSGT00940000156159 #30 ENSGT00390000011698.c.b #31 ENSGT00940000160102 #32 ENSGT00390000012397 ENSGT00950000183181.B.a #33 ENSGT00940000164048.a ENSGT00940000156452 ENSGT00950000182998.A ENSGT00390000002032 ENSGT00390000018097 Bovidae ANCESTRAL SPECIES 7 ENSGT00390000013481.c.a #7 ENSGT00390000002030 #8 ENSGT00940000161456 #9 ENSGT00730000111340 #10 ENSGT00940000157224 #11 ENSGT00940000158652 #12 ENSGT00530000064222.b #13 ENSGT00390000011854 #14 ENSGT00940000159561 #15 ENSGT00940000158237 #16 ENSGT00950000183050.b.a #17 ENSGT00390000013544 #18 ENSGT00940000155014 #19 ENSGT00390000012837 #20 ENSGT00390000006191 #21 ENSGT00390000005665 #22 ENSGT00390000001071 #23 ENSGT00390000008727.a.b #25 ENSGT00390000012816 #26 ENSGT00910000144250 #28 ENSGT00550000074912 #29 ENSGT00940000156159 #30 ENSGT00390000011698.c.b #31 ENSGT00940000160102 #32 ENSGT00390000012397 ENSGT00950000183181.B.a #33 ENSGT00940000164048.a ENSGT00940000156452 ENSGT00950000182998.A ENSGT00390000002032 ENSGT00390000018097 Caprinae ANCESTRAL SPECIES 11 ENSGT00390000013481.c.a #7 ENSGT00390000002030 #8 ENSGT00940000161456 #9 ENSGT00730000111340 #10 ENSGT00940000157224 #11 ENSGT00940000158652 #12 ENSGT00530000064222.b #13 ENSGT00390000011854 #14 ENSGT00940000159561 #15 ENSGT00940000158237 #16 ENSGT00950000183050.b.a #17 ENSGT00390000013544 #18 ENSGT00940000155014.rb.a #19 ENSGT00390000012837 #20 ENSGT00390000006191 #21 ENSGT00390000005665 #22 ENSGT00390000001071 #23 ENSGT00390000008727.a.b #25 ENSGT00390000012816 #26 ENSGT00910000144250 #28 ENSGT00550000074912 #29 ENSGT00940000156159 #30 ENSGT00390000011698.c.b #31 ENSGT00940000160102 #32 ENSGT00390000012397 ENSGT00950000183181.B.a #33 ENSGT00940000164048.a ENSGT00940000156452 ENSGT00950000182998.A ENSGT00390000002032 ENSGT00390000018097 Rambouillet Sheep MODERN SPECIES 23 GCH1 (ENSOARG00020015916) #7 WDHD1 (ENSOARG00020016059) #8 SOCS4 (ENSOARG00020016372) #9 MAPK1IP1L (ENSOARG00020016392) #10 LGALS3 (ENSOARG00020016446) #11 DLGAP5 (ENSOARG00020016493) #12 FBXO34 (ENSOARG00020016670) #13 ATG14 (ENSOARG00020016704) #14 TBPL2 (ENSOARG00020016918) #15 KTN1 (ENSOARG00020017183) #16 PELI2 (ENSOARG00020019043) #17 ENSOARG00020019111 #18 OTX2 (ENSOARG00020019426) #19 EXOC5 (ENSOARG00020019509) #20 AP5M1 (ENSOARG00020020008) #21 NAA30 (ENSOARG00020020150) #22 CCDC198 (ENSOARG00020020200) #23 ENSOARG00020020321 #24 SLC35F4 (ENSOARG00020020338) #25 ARMH4 (ENSOARG00020020459) #26 ENSOARG00020020575 #27 ACTR10 (ENSOARG00020020638) #28 PSMA3 (ENSOARG00020020746) #29 ARID4A (ENSOARG00020020842) #30 TOMM20L (ENSOARG00020021304) #31 TIMM9 (ENSOARG00020007740) #32 DACT1 (ENSOARG00020008146) #33 ENSOARG00020008208 #34 ENSOARG00020008239 #35 ENSOARG00020008270 #36 ENSOARG00020008316 #37 Goat MODERN SPECIES 1 GCH1 (ENSCHIG00000018987) #7 WDHD1 (ENSCHIG00000017956) #8 SOCS4 (ENSCHIG00000008618) #9 MAPK1IP1L (ENSCHIG00000015375) #10 LGALS3 (ENSCHIG00000011567) #11 DLGAP5 (ENSCHIG00000017688) #12 ATG14 (ENSCHIG00000015773) #14 TBPL2 (ENSCHIG00000026824) #15 KTN1 (ENSCHIG00000025347) #16 PELI2 (ENSCHIG00000015413) #17 ENSCHIG00000021274 TMEM260 (ENSCHIG00000018277) #18 OTX2 (ENSCHIG00000011465) #19 EXOC5 (ENSCHIG00000021413) #20 AP5M1 (ENSCHIG00000017238) #21 NAA30 (ENSCHIG00000014880) #22 CCDC198 (ENSCHIG00000027108) #23 SLC35F4 (ENSCHIG00000023214) #25 ARMH4 (ENSCHIG00000011182) #26 ACTR10 (ENSCHIG00000025582) #28 PSMA3 (ENSCHIG00000016692) #29 ARID4A (ENSCHIG00000021589) #30 TOMM20L (ENSCHIG00000023817) #31 TIMM9 (ENSCHIG00000020353) #32 KIAA0586 (ENSCHIG00000022943) DACT1 (ENSCHIG00000020832) #33 ENSCHIG00000003466 DAAM1 (ENSCHIG00000000665) GPR135 (ENSCHIG00000014842) L3HYPDH (ENSCHIG00000019611) JKAMP (ENSCHIG00000021867) Bovinae ANCESTRAL SPECIES 11 ENSGT00390000013481.c.a #7 ENSGT00390000002030 #8 ENSGT00940000161456 #9 ENSGT00730000111340 #10 ENSGT00940000157224 #11 ENSGT00940000158652 #12 ENSGT00530000064222.b #13 ENSGT00390000011854 #14 ENSGT00940000159561 #15 ENSGT00940000158237 #16 ENSGT00950000183050.b.a #17 ENSGT00390000013544 #18 ENSGT00940000155014 #19 ENSGT00390000012837 #20 ENSGT00390000006191 #21 ENSGT00390000005665 #22 ENSGT00390000001071 #23 ENSGT00390000008727.a.b #25 ENSGT00390000012816 #26 ENSGT00910000144250 #28 ENSGT00550000074912 #29 ENSGT00940000156159 #30 ENSGT00390000011698.c.b #31 ENSGT00940000160102 #32 ENSGT00390000012397 ENSGT00950000183181.B.a #33 ENSGT00940000164048.a ENSGT00940000156452 ENSGT00950000182998.A ENSGT00390000002032 ENSGT00390000018097 American bison MODERN SPECIES 3170 MAPK1IP1L (ENSBBBG00000018974) #10 LGALS3 (ENSBBBG00000004851) #11 DLGAP5 (ENSBBBG00000008355) #12 FBXO34 (ENSBBBG00000019056) #13 ATG14 (ENSBBBG00000019076) #14 TBPL2 (ENSBBBG00000019082) #15 KTN1 (ENSBBBG00000005359) #16 ENSBBBG00000019861 ENSBBBG00000019867 PELI2 (ENSBBBG00000005390) #17 TMEM260 (ENSBBBG00000005126) #18 ENSBBBG00000019961 ENSBBBG00000007439 EXOC5 (ENSBBBG00000020012) #20 AP5M1 (ENSBBBG00000020032) #21 ENSBBBG00000020043 #22 CCDC198 (ENSBBBG00000005091) #23 SLC35F4 (ENSBBBG00000005428) #25 ENSBBBG00000020068 ARMH4 (ENSBBBG00000008369) #26 ACTR10 (ENSBBBG00000020095) #28 PSMA3 (ENSBBBG00000020117) #29 ARID4A (ENSBBBG00000020226) #30 TOMM20L (ENSBBBG00000005467) #31 TIMM9 (ENSBBBG00000020244) #32 KIAA0586 (ENSBBBG00000005496) ENSBBBG00000020348 ENSBBBG00000020350 DAAM1 (ENSBBBG00000000691) L3HYPDH (ENSBBBG00000000671) JKAMP (ENSBBBG00000000637) Bos ANCESTRAL SPECIES 13 ENSGT00390000013481.c.a #7 ENSGT00390000002030 #8 ENSGT00940000161456 #9 ENSGT00730000111340 #10 ENSGT00940000157224 #11 ENSGT00940000158652 #12 ENSGT00530000064222.b #13 ENSGT00390000011854 #14 ENSGT00940000159561 #15 ENSGT00940000158237 #16 ENSGT00950000183050.b.a #17 ENSGT00390000013544 #18 ENSGT00940000155014 #19 ENSGT00390000012837 #20 ENSGT00390000006191 #21 ENSGT00390000005665 #22 ENSGT00390000001071 #23 ENSGT00390000008727.a.b #25 ENSGT00390000012816 #26 ENSGT00910000144250 #28 ENSGT00550000074912 #29 ENSGT00940000156159 #30 ENSGT00390000011698.c.b #31 ENSGT00940000160102 #32 ENSGT00390000012397 ENSGT00950000183181.B.a #33 ENSGT00940000164048.a ENSGT00940000156452 ENSGT00950000182998.A ENSGT00390000002032 ENSGT00390000018097 Bos_b ANCESTRAL SPECIES 11 ENSGT00390000013481.c.a #7 ENSGT00390000002030 #8 ENSGT00940000161456 #9 ENSGT00730000111340 #10 ENSGT00940000157224 #11 ENSGT00940000158652 #12 ENSGT00530000064222.b #13 ENSGT00390000011854 #14 ENSGT00940000159561 #15 ENSGT00940000158237 #16 ENSGT00950000183050.b.a #17 ENSGT00390000013544 #18 ENSGT00940000155014 #19 ENSGT00390000012837 #20 ENSGT00390000006191 #21 ENSGT00390000005665 #22 ENSGT00390000001071 #23 ENSGT00390000008727.a.b #25 ENSGT00390000012816 #26 ENSGT00910000144250 #28 ENSGT00550000074912 #29 ENSGT00940000156159 #30 ENSGT00390000011698.c.b #31 ENSGT00940000160102 #32 ENSGT00390000012397 ENSGT00950000183181.B.a #33 ENSGT00940000164048.a ENSGT00940000156452 ENSGT00950000182998.A ENSGT00390000002032 ENSGT00390000018097 Hybrid Bos Indicus MODERN SPECIES 1 ENSBIXG00005001258 LGALS3 (ENSBIXG00005012181) #11 DLGAP5 (ENSBIXG00005012158) #12 FBXO34 (ENSBIXG00005012099) #13 ATG14 (ENSBIXG00005005821) #14 TBPL2 (ENSBIXG00005011981) #15 KTN1 (ENSBIXG00005011805) #16 PELI2 (ENSBIXG00005000985) #17 ENSBIXG00005000589 ENSBIXG00005010923 ENSBIXG00005010907 TMEM260 (ENSBIXG00005006780) #18 OTX2 (ENSBIXG00005010652) #19 EXOC5 (ENSBIXG00005010619) #20 AP5M1 (ENSBIXG00005000698) #21 NAA30 (ENSBIXG00005010568) #22 CCDC198 (ENSBIXG00005010538) #23 SLC35F4 (ENSBIXG00005010483) #25 ARMH4 (ENSBIXG00005010427) #26 ENSBIXG00005010405 ACTR10 (ENSBIXG00005000870) #28 PSMA3 (ENSBIXG00005010386) #29 ARID4A (ENSBIXG00005010327) #30 TOMM20L (ENSBIXG00005010278) #31 TIMM9 (ENSBIXG00005010269) #32 KIAA0586 (ENSBIXG00005010220) DACT1 (ENSBIXG00005010128) #33 DAAM1 (ENSBIXG00005010058) ENSBIXG00005010009 GPR135 (ENSBIXG00005009994) L3HYPDH (ENSBIXG00005009991) Cow MODERN SPECIES 1 SOCS4 (ENSBTAG00000021988) #9 MAPK1IP1L (ENSBTAG00000021986) #10 LGALS3 (ENSBTAG00000002326) #11 DLGAP5 (ENSBTAG00000002331) #12 FBXO34 (ENSBTAG00000020533) #13 ENSBTAG00000051943 ATG14 (ENSBTAG00000010795) #14 TBPL2 (ENSBTAG00000018277) #15 KTN1 (ENSBTAG00000017713) #16 PELI2 (ENSBTAG00000005141) #17 TMEM260 (ENSBTAG00000030881) #18 OTX2 (ENSBTAG00000014741) #19 ENSBTAG00000051793 EXOC5 (ENSBTAG00000013042) #20 AP5M1 (ENSBTAG00000013043) #21 NAA30 (ENSBTAG00000012998) #22 CCDC198 (ENSBTAG00000009862) #23 SLC35F4 (ENSBTAG00000006341) #25 ARMH4 (ENSBTAG00000020880) #26 ACTR10 (ENSBTAG00000014392) #28 PSMA3 (ENSBTAG00000002808) #29 ARID4A (ENSBTAG00000018898) #30 TOMM20L (ENSBTAG00000052431) #31 TIMM9 (ENSBTAG00000010503) KIAA0586 (ENSBTAG00000004631) DACT1 (ENSBTAG00000019421) #33 ENSBTAG00000045799 DAAM1 (ENSBTAG00000005984) GPR135 (ENSBTAG00000003370) L3HYPDH (ENSBTAG00000030824) JKAMP (ENSBTAG00000003371) Bos_a ANCESTRAL SPECIES 1 ENSGT00390000013481.c.a #7 ENSGT00390000002030 #8 ENSGT00940000161456 #9 ENSGT00730000111340 #10 ENSGT00940000157224 #11 ENSGT00940000158652 #12 ENSGT00530000064222.b #13 ENSGT00390000011854 #14 ENSGT00940000159561 #15 ENSGT00940000158237 #16 ENSGT00950000183050.b.a #17 ENSGT00390000013544 #18 ENSGT00940000155014 #19 ENSGT00390000012837 #20 ENSGT00390000006191 #21 ENSGT00390000005665 #22 ENSGT00390000001071 #23 ENSGT00390000008727.a.b #25 ENSGT00390000012816 #26 ENSGT00910000144250 #28 ENSGT00550000074912 #29 ENSGT00940000156159 #30 ENSGT00390000011698.c.b #31 ENSGT00940000160102 #32 ENSGT00390000012397 ENSGT00950000183181.B.a #33 ENSGT00940000164048.b ENSGT00940000156452 ENSGT00390000002032 ENSGT00390000018097 ENSGT00390000001277 Domestic yak MODERN SPECIES 2 WDHD1 (ENSBGRG00000024184) #8 SOCS4 (ENSBGRG00000024612) #9 MAPK1IP1L (ENSBGRG00000024622) #10 LGALS3 (ENSBGRG00000024654) #11 DLGAP5 (ENSBGRG00000003622) #12 FBXO34 (ENSBGRG00000003724) #13 ATG14 (ENSBGRG00000003787) #14 TBPL2 (ENSBGRG00000004017) #15 KTN1 (ENSBGRG00000004134) #16 PELI2 (ENSBGRG00000004832) #17 ENSBGRG00000004886 TMEM260 (ENSBGRG00000004946) #18 OTX2 (ENSBGRG00000005329) #19 EXOC5 (ENSBGRG00000005408) #20 AP5M1 (ENSBGRG00000005692) #21 NAA30 (ENSBGRG00000005732) #22 CCDC198 (ENSBGRG00000005763) #23 SLC35F4 (ENSBGRG00000005871) #25 ARMH4 (ENSBGRG00000005926) #26 ACTR10 (ENSBGRG00000006018) #28 PSMA3 (ENSBGRG00000006071) #29 ARID4A (ENSBGRG00000006268) #30 TOMM20L (ENSBGRG00000006358) #31 TIMM9 (ENSBGRG00000006403) #32 KIAA0586 (ENSBGRG00000006467) ENSBGRG00000006612 ENSBGRG00000006621 DACT1 (ENSBGRG00000006643) #33 ENSBGRG00000006708 DAAM1 (ENSBGRG00000006735) L3HYPDH (ENSBGRG00000006914) Wild yak MODERN SPECIES 1035 TMEM260 (ENSBMUG00000016138) #18 ENSBMUG00000016164 EXOC5 (ENSBMUG00000016174) #20 AP5M1 (ENSBMUG00000016194) #21 NAA30 (ENSBMUG00000016213) #22 ENSBMUG00000016235 #23 SLC35F4 (ENSBMUG00000016285) #25 Siberian musk deer MODERN SPECIES 258 ENSMMSG00000006506 ENSMMSG00000006537 ENSMMSG00000006587 #20 ENSMMSG00000006789 AP5M1 (ENSMMSG00000006814) #21 NAA30 (ENSMMSG00000006855) #22 ENSMMSG00000006892 #23 SLC35F4 (ENSMMSG00000006922) #25 ENSMMSG00000006982 ENSMMSG00000007001 ARMH4 (ENSMMSG00000007016) #26 ACTR10 (ENSMMSG00000007044) #28 PSMA3 (ENSMMSG00000007088) #29 ARID4A (ENSMMSG00000007258) #30 TOMM20L (ENSMMSG00000007451) #31 TIMM9 (ENSMMSG00000007476) #32 KIAA0586 (ENSMMSG00000007552) DACT1 (ENSMMSG00000008105) #33 Yarkand deer MODERN SPECIES 3 LGALS3 (ENSCHYG00000015987) #11 DLGAP5 (ENSCHYG00000016132) #12 ENSCHYG00000016406 FBXO34 (ENSCHYG00000016434) #13 ATG14 (ENSCHYG00000016469) #14 TBPL2 (ENSCHYG00000016629) #15 KTN1 (ENSCHYG00000016827) #16 ENSCHYG00000006063 PELI2 (ENSCHYG00000006092) #17 ENSCHYG00000006139 TMEM260 (ENSCHYG00000006158) #18 OTX2 (ENSCHYG00000006298) #19 ENSCHYG00000006338 EXOC5 (ENSCHYG00000006373) #20 AP5M1 (ENSCHYG00000006463) #21 NAA30 (ENSCHYG00000006525) #22 CCDC198 (ENSCHYG00000006562) #23 SLC35F4 (ENSCHYG00000006593) #25 ENSCHYG00000006672 ARMH4 (ENSCHYG00000006690) #26 ENSCHYG00000006747 ENSCHYG00000006780 ACTR10 (ENSCHYG00000006808) #28 PSMA3 (ENSCHYG00000006862) #29 ARID4A (ENSCHYG00000006944) #30 TOMM20L (ENSCHYG00000007060) #31 TIMM9 (ENSCHYG00000007088) #32 KIAA0586 (ENSCHYG00000007211) DACT1 (ENSCHYG00000007708) #33 ENSCHYG00000007730 DAAM1 (ENSCHYG00000007778)