Euarchontoglires_A ANCESTRAL SPECIES 3 ENSGT00390000013481.c.a #8 ENSGT00390000002030 #9 ENSGT00940000161456 #10 ENSGT00730000111340 #11 ENSGT00940000157224 #12 ENSGT00940000158652 #13 ENSGT00530000064222.b #14 ENSGT00390000011854 #15 ENSGT00940000159561 ENSGT00940000158237 #16 ENSGT00950000183050.b.a #17 ENSGT00390000013544 #18 ENSGT00940000155014 #19 ENSGT00390000012837 #20 ENSGT00390000006191 #21 ENSGT00390000005665 #22 ENSGT00390000001071 #23 ENSGT00390000008727.a.b #24 ENSGT00390000012816 #25 ENSGT00910000144250 ENSGT00550000074912 ENSGT00940000156159 ENSGT00390000011698.c.b ENSGT00940000160102 ENSGT00390000012397 ENSGT00950000183181.B.a ENSGT00940000156452 ENSGT00950000182998.A ENSGT00390000002032 ENSGT00390000018097 ENSGT00390000001277 Glires ANCESTRAL SPECIES 12 ENSGT00390000013481.c.a #8 ENSGT00390000002030 #9 ENSGT00940000161456 #10 ENSGT00730000111340 #11 ENSGT00940000157224 #12 ENSGT00940000158652 #13 ENSGT00530000064222.b #14 ENSGT00390000011854 #15 ENSGT00940000159561 ENSGT00940000158237 #16 ENSGT00950000183050.b.a #17 ENSGT00390000013544 #18 ENSGT00940000155014 #19 ENSGT00390000012837 #20 ENSGT00390000006191 #21 ENSGT00390000005665 #22 ENSGT00390000001071 #23 ENSGT00390000008727.a.b #24 ENSGT00390000012816 #25 ENSGT00910000144250 ENSGT00550000074912 ENSGT00940000156159 ENSGT00390000011698.c.b ENSGT00940000160102 ENSGT00390000012397 ENSGT00950000183181.B.a ENSGT00940000156452 ENSGT00950000182998.A ENSGT00390000002032 ENSGT00390000018097 ENSGT00390000001277 Rodentia ANCESTRAL SPECIES 3 ENSGT00390000013481.c.a #8 ENSGT00390000002030 #9 ENSGT00940000161456 #10 ENSGT00730000111340 #11 ENSGT00940000157224 #12 ENSGT00940000158652 #13 ENSGT00530000064222.b #14 ENSGT00390000011854 #15 ENSGT00940000159561 ENSGT00940000158237 #16 ENSGT00950000183050.b.a #17 ENSGT00390000013544 #18 ENSGT00940000155014 #19 ENSGT00390000012837 #20 ENSGT00390000006191 #21 ENSGT00390000005665 #22 ENSGT00390000001071 #23 ENSGT00390000008727.a.b #24 ENSGT00390000012816 #25 ENSGT00910000144250 ENSGT00550000074912 ENSGT00940000156159 ENSGT00390000011698.c.b ENSGT00940000160102 ENSGT00390000012397 ENSGT00950000183181.B.a ENSGT00940000156452 ENSGT00950000182998.A ENSGT00390000002032 ENSGT00390000018097 ENSGT00390000001277 Rodentia_B ANCESTRAL SPECIES 7 ENSGT00390000013481.c.a #8 ENSGT00390000002030 #9 ENSGT00940000161456 #10 ENSGT00730000111340 #11 ENSGT00940000157224 #12 ENSGT00940000158652 #13 ENSGT00530000064222.b #14 ENSGT00390000011854 #15 ENSGT00940000159561 ENSGT00940000158237 #16 ENSGT00950000183050.b.a #17 ENSGT00390000013544 #18 ENSGT00940000155014 #19 ENSGT00390000012837 #20 ENSGT00390000006191 #21 ENSGT00390000005665 #22 ENSGT00390000001071 #23 ENSGT00390000008727.a.b #24 ENSGT00390000012816 #25 ENSGT00910000144250 ENSGT00550000074912 ENSGT00940000156159 ENSGT00390000011698.c.b ENSGT00940000160102 ENSGT00390000012397 ENSGT00950000183181.B.a ENSGT00940000156452 ENSGT00950000182998.A ENSGT00390000002032 ENSGT00390000018097 ENSGT00390000001277 Myomorpha ANCESTRAL SPECIES 7 ENSGT00390000013481.c.a #8 ENSGT00390000002030 #9 ENSGT00940000161456 #10 ENSGT00730000111340 #11 ENSGT00940000157224 #12 ENSGT00940000158652 #13 ENSGT00530000064222.b #14 ENSGT00390000011854 #15 ENSGT00940000159561 ENSGT00940000158237 #16 ENSGT00950000183050.b.a #17 ENSGT00390000013544 #18 ENSGT00940000155014 #19 ENSGT00390000012837 #20 ENSGT00390000006191 #21 ENSGT00390000005665 #22 ENSGT00390000001071 #23 ENSGT00390000008727.a.b #24 ENSGT00390000012816 #25 ENSGT00910000144250 ENSGT00550000074912 ENSGT00940000156159 ENSGT00390000011698.c.b ENSGT00940000160102 ENSGT00390000012397 ENSGT00950000183181.B.a ENSGT00940000156452 ENSGT00950000182998.A ENSGT00390000002032 ENSGT00390000018097 ENSGT00390000001277 Muroidea ANCESTRAL SPECIES 16 ENSGT00390000013481.c.a #8 ENSGT00390000002030 #9 ENSGT00940000161456 #10 ENSGT00730000111340 #11 ENSGT00940000157224 #12 ENSGT00940000158652 #13 ENSGT00530000064222.b #14 ENSGT00390000011854 #15 ENSGT00940000159561 ENSGT00940000158237 #16 ENSGT00950000183050.b.a #17 ENSGT00390000013544 #18 ENSGT00940000155014 #19 ENSGT00390000012837 #20 ENSGT00390000006191 #21 ENSGT00390000005665 #22 ENSGT00390000001071 #23 ENSGT00390000008727.a.b #24 ENSGT00390000012816 #25 ENSGT00910000144250 ENSGT00550000074912 ENSGT00940000156159 ENSGT00390000011698.c.b ENSGT00940000160102 ENSGT00390000012397 ENSGT00950000183181.B.a ENSGT00940000156452 ENSGT00950000182998.A ENSGT00390000002032 ENSGT00390000018097.i ENSGT00390000001277 Muroidea_A ANCESTRAL SPECIES 10 ENSGT00940000157933 #7 ENSGT00390000013481.c.a #8 ENSGT00390000002030 #9 ENSGT00940000161456 #10 ENSGT00730000111340.g #11 ENSGT00940000157224 #12 ENSGT00940000158652 #13 ENSGT00530000064222.b #14 ENSGT00390000011854 #15 ENSGT00940000158237 #16 ENSGT00950000183050.b.a #17 ENSGT00390000013544 #18 ENSGT00940000155014 #19 ENSGT00390000012837 #20 ENSGT00390000006191 #21 ENSGT00390000005665 #22 ENSGT00390000001071 #23 ENSGT00390000008727.a.b #24 ENSGT00390000012816 #25 ENSGT00940000162920 #26 ENSGT00940000163035 #28 ENSGT00940000159214.q #31 ENSGT00940000162669 #32 ENSGT00940000163286 #33 ENSGT00940000162171 #34 ENSGT00940000164116 #35 ENSGT00940000162873.m #36 ENSGT00940000162873.n #37 ENSGT00940000163142 ENSGT00940000163302 ENSGT00940000163623 Murinae ANCESTRAL SPECIES 16 ENSGT00940000157933 #7 ENSGT00390000013481.c.a #8 ENSGT00390000002030 #9 ENSGT00940000161456 #10 ENSGT00730000111340.g #11 ENSGT00940000157224 #12 ENSGT00940000158652 #13 ENSGT00530000064222.b #14 ENSGT00390000011854 #15 ENSGT00940000158237 #16 ENSGT00950000183050.b.a #17 ENSGT00390000013544 #18 ENSGT00940000155014 #19 ENSGT00390000012837 #20 ENSGT00390000006191 #21 ENSGT00390000005665 #22 ENSGT00390000001071 #23 ENSGT00390000008727.a.b #24 ENSGT00390000012816 #25 ENSGT00940000162920 #26 ENSGT00940000163035 #28 ENSGT00940000159214.r #30 ENSGT00940000159214.q #31 ENSGT00940000162669 #32 ENSGT00940000163286 #33 ENSGT00940000162171 #34 ENSGT00940000164116 #35 ENSGT00940000162873.m #36 ENSGT00940000162873.n #37 ENSGT00940000163142 ENSGT00940000163302 Mus ANCESTRAL SPECIES 8 ENSGT00940000157933 #7 ENSGT00390000013481.c.a #8 ENSGT00390000002030 #9 ENSGT00940000161456 #10 ENSGT00730000111340.g #11 ENSGT00940000157224 #12 ENSGT00940000158652 #13 ENSGT00530000064222.b #14 ENSGT00390000011854 #15 ENSGT00940000158237 #16 ENSGT00950000183050.b.a #17 ENSGT00390000013544 #18 ENSGT00940000155014 #19 ENSGT00390000012837 #20 ENSGT00390000006191 #21 ENSGT00390000005665 #22 ENSGT00390000001071 #23 ENSGT00390000008727.a.b #24 ENSGT00390000012816 #25 ENSGT00940000162920 #26 ENSGT00940000163035 #28 ENSGT00940000159214.r #30 ENSGT00940000159214.q #31 ENSGT00940000162669 #32 ENSGT00940000163286 #33 ENSGT00940000162171 #34 ENSGT00940000164116 #35 ENSGT00940000162873.m #36 ENSGT00940000162873.n #37 ENSGT00940000163142 ENSGT00940000163302 Mus_A ANCESTRAL SPECIES 12 ENSGT00940000157933 #7 ENSGT00390000013481.c.a #8 ENSGT00390000002030 #9 ENSGT00940000161456 #10 ENSGT00730000111340.g #11 ENSGT00940000157224 #12 ENSGT00940000158652 #13 ENSGT00530000064222.b #14 ENSGT00390000011854 #15 ENSGT00940000158237 #16 ENSGT00950000183050.b.a #17 ENSGT00390000013544 #18 ENSGT00940000155014 #19 ENSGT00390000012837 #20 ENSGT00390000006191 #21 ENSGT00390000005665 #22 ENSGT00390000001071 #23 ENSGT00390000008727.a.b #24 ENSGT00390000012816 #25 ENSGT00940000162920 #26 ENSGT00940000163035 #28 ENSGT00940000159214.r #30 ENSGT00940000159214.q #31 ENSGT00940000162669 #32 ENSGT00940000163286 #33 ENSGT00940000162171 #34 ENSGT00940000164116 #35 ENSGT00940000162873.m #36 ENSGT00940000162873.n #37 ENSGT00940000163142 ENSGT00940000163302 Mus_B ANCESTRAL SPECIES 11 ENSGT00940000157933 #7 ENSGT00390000013481.c.a #8 ENSGT00390000002030 #9 ENSGT00940000161456 #10 ENSGT00730000111340.g #11 ENSGT00940000157224 #12 ENSGT00940000158652 #13 ENSGT00530000064222.b.e #14 ENSGT00390000011854 #15 ENSGT00940000158237 #16 ENSGT00950000183050.b.a #17 ENSGT00390000013544 #18 ENSGT00940000155014 #19 ENSGT00390000012837 #20 ENSGT00390000006191 #21 ENSGT00390000005665 #22 ENSGT00390000001071 #23 ENSGT00390000008727.a.b #24 ENSGT00390000012816 #25 ENSGT00940000162920 #26 ENSGT00940000163035.v ##28 ENSGT00940000159214.q #31 ENSGT00940000162669 #32 ENSGT00940000163286 #33 ENSGT00940000162171 #34 ENSGT00940000164116 #35 ENSGT00940000162873.m #36 ENSGT00940000162873.n #37 ENSGT00940000163142 ENSGT00940000163302 ENSGT00940000163623 Mouse MODERN SPECIES 5 Samd4 (ENSMUSG00000021838) #7 Gch1 (ENSMUSG00000037580) #8 Wdhd1 (ENSMUSG00000037572) #9 Socs4 (ENSMUSG00000048379) #10 Mapk1ip1l (ENSMUSG00000021840) #11 Lgals3 (ENSMUSG00000050335) #12 Dlgap5 (ENSMUSG00000037544) #13 Fbxo34 (ENSMUSG00000037536) #14 Atg14 (ENSMUSG00000037526) #15 Ktn1 (ENSMUSG00000021843) #16 Peli2 (ENSMUSG00000021846) #17 Tmem260 (ENSMUSG00000036339) #18 Otx2 (ENSMUSG00000021848) #19 Exoc5 (ENSMUSG00000061244) #20 Ap5m1 (ENSMUSG00000036291) #21 Naa30 (ENSMUSG00000036282) #22 ccdc198 (ENSMUSG00000021850) #23 Slc35f4 (ENSMUSG00000021852) #24 Armh4 (ENSMUSG00000036242) #25 Or4n5 (ENSMUSG00000048933) #26 Or4l1 (ENSMUSG00000093825) #27 Or4l15 (ENSMUSG00000096254) #28 Or4k15b (ENSMUSG00000068437) #29 Or4k15c (ENSMUSG00000060523) #30 Or4k15 (ENSMUSG00000059488) #31 Or4k1 (ENSMUSG00000050030) #32 Or4k5 (ENSMUSG00000049011) #33 Or4k2 (ENSMUSG00000109835) #34 Or4k6 (ENSMUSG00000048080) #35 Or4n4 (ENSMUSG00000091873) #36 Or4n4b (ENSMUSG00000090874) #37 Mus_C ANCESTRAL SPECIES 26 ENSGT00940000157933 #7 ENSGT00390000013481.c.a #8 ENSGT00390000002030 #9 ENSGT00940000161456 #10 ENSGT00730000111340.g #11 ENSGT00940000157224 #12 ENSGT00940000158652 #13 ENSGT00530000064222.b.e #14 ENSGT00390000011854 #15 ENSGT00940000158237 #16 ENSGT00950000183050.b.a #17 ENSGT00390000013544 #18 ENSGT00940000155014 #19 ENSGT00390000012837 #20 ENSGT00390000006191 #21 ENSGT00390000005665 #22 ENSGT00390000001071 #23 ENSGT00390000008727.a.b #24 ENSGT00390000012816 #25 ENSGT00940000162920 #26 ENSGT00940000163035.v ##28 ENSGT00940000159214.q #31 ENSGT00940000162669 #32 ENSGT00940000163286 #33 ENSGT00940000162171 #34 ENSGT00940000164116 #35 ENSGT00940000162873.m #36 ENSGT00940000162873.n #37 ENSGT00940000163142 ENSGT00940000163302 ENSGT00940000163623 spretus MODERN SPECIES 5 Samd4 (MGP_SPRETEiJ_G0020049) #7 Gch1 (MGP_SPRETEiJ_G0020050) #8 Wdhd1 (MGP_SPRETEiJ_G0020051) #9 Socs4 (MGP_SPRETEiJ_G0020052) #10 Mapk1ip1l (MGP_SPRETEiJ_G0020053) #11 Lgals3 (MGP_SPRETEiJ_G0020054) #12 Dlgap5 (MGP_SPRETEiJ_G0020055) #13 Fbxo34 (MGP_SPRETEiJ_G0020056) #14 Atg14 (MGP_SPRETEiJ_G0020057) #15 Ktn1 (MGP_SPRETEiJ_G0020058) #16 Peli2 (MGP_SPRETEiJ_G0020059) #17 Tmem260 (MGP_SPRETEiJ_G0020060) #18 Otx2 (MGP_SPRETEiJ_G0020061) #19 Exoc5 (MGP_SPRETEiJ_G0020062) #20 Ap5m1 (MGP_SPRETEiJ_G0020063) #21 Naa30 (MGP_SPRETEiJ_G0020064) #22 ccdc198 (MGP_SPRETEiJ_G0020065) #23 Slc35f4 (MGP_SPRETEiJ_G0020066) #24 Armh4 (MGP_SPRETEiJ_G0020067) #25 Or4n5 (MGP_SPRETEiJ_G0020068) #26 MGP_SPRETEiJ_G0020069 ##28 MGP_SPRETEiJ_G0020070 ##28 MGP_SPRETEiJ_G0020071 #31 MGP_SPRETEiJ_G0020072 #31 MGP_SPRETEiJ_G0020073 #31 Or4k1 (MGP_SPRETEiJ_G0020074) #32 Or4k5 (MGP_SPRETEiJ_G0020075) #33 Or4k2 (MGP_SPRETEiJ_G0020076) #34 Or4k6 (MGP_SPRETEiJ_G0020077) #35 Or4n4 (MGP_SPRETEiJ_G0020078) #36 Or4n4b (MGP_SPRETEiJ_G0020079) #37 Steppe mouse MODERN SPECIES 3167 ENSMSIG00000012199 Ktn1 (ENSMSIG00000012321) #16 Peli2 (ENSMSIG00000023523) #17 Tmem260 (ENSMSIG00000023555) #18 Otx2 (ENSMSIG00000023705) #19 Exoc5 (ENSMSIG00000023755) #20 Ap5m1 (ENSMSIG00000023805) #21 Naa30 (ENSMSIG00000023819) #22 ccdc198 (ENSMSIG00000023832) #23 Slc35f4 (ENSMSIG00000023850) #24 Armh4 (ENSMSIG00000023914) #25 ENSMSIG00000023942 Or4n5 (ENSMSIG00000023960) #26 Ryukyu mouse MODERN SPECIES 5 Samd4 (MGP_CAROLIEiJ_G0019161) #7 Gch1 (MGP_CAROLIEiJ_G0019162) #8 Wdhd1 (MGP_CAROLIEiJ_G0019163) #9 Socs4 (MGP_CAROLIEiJ_G0019164) #10 Mapk1ip1l (MGP_CAROLIEiJ_G0019165) #11 Lgals3 (MGP_CAROLIEiJ_G0019166) #12 Dlgap5 (MGP_CAROLIEiJ_G0019167) #13 Fbxo34 (MGP_CAROLIEiJ_G0019168) #14 Atg14 (MGP_CAROLIEiJ_G0019169) #15 Ktn1 (MGP_CAROLIEiJ_G0019170) #16 Peli2 (MGP_CAROLIEiJ_G0019171) #17 Tmem260 (MGP_CAROLIEiJ_G0019172) #18 Otx2 (MGP_CAROLIEiJ_G0019173) #19 Exoc5 (MGP_CAROLIEiJ_G0019174) #20 Ap5m1 (MGP_CAROLIEiJ_G0019175) #21 Naa30 (MGP_CAROLIEiJ_G0019176) #22 ccdc198 (MGP_CAROLIEiJ_G0019177) #23 Slc35f4 (MGP_CAROLIEiJ_G0019178) #24 Armh4 (MGP_CAROLIEiJ_G0019179) #25 Or4n5 (MGP_CAROLIEiJ_G0019180) #26 MGP_CAROLIEiJ_G0019181 #31 MGP_CAROLIEiJ_G0019182 #31 MGP_CAROLIEiJ_G0019183 #31 Or4k1 (MGP_CAROLIEiJ_G0019184) #32 Or4k5 (MGP_CAROLIEiJ_G0019185) #33 Or4k2 (MGP_CAROLIEiJ_G0019186) #34 Or4k6 (MGP_CAROLIEiJ_G0019187) #35 Or4n4 (MGP_CAROLIEiJ_G0019188) #36 Or4n4b (MGP_CAROLIEiJ_G0019189) #37 Or4m1 (MGP_CAROLIEiJ_G0019190) Or4q3 (MGP_CAROLIEiJ_G0019191) Shrew mouse MODERN SPECIES 21 Samd4 (MGP_PahariEiJ_G0030178) #7 Gch1 (MGP_PahariEiJ_G0030179) #8 Wdhd1 (MGP_PahariEiJ_G0030180) #9 Socs4 (MGP_PahariEiJ_G0030181) #10 Mapk1ip1l (MGP_PahariEiJ_G0030182) #11 Lgals3 (MGP_PahariEiJ_G0030183) #12 Dlgap5 (MGP_PahariEiJ_G0030184) #13 Fbxo34 (MGP_PahariEiJ_G0030185) #14 Atg14 (MGP_PahariEiJ_G0030186) #15 Ktn1 (MGP_PahariEiJ_G0030187) #16 Peli2 (MGP_PahariEiJ_G0030188) #17 Tmem260 (MGP_PahariEiJ_G0030189) #18 Otx2 (MGP_PahariEiJ_G0030190) #19 Exoc5 (MGP_PahariEiJ_G0030191) #20 Ap5m1 (MGP_PahariEiJ_G0030192) #21 Naa30 (MGP_PahariEiJ_G0030193) #22 ccdc198 (MGP_PahariEiJ_G0030194) #23 Slc35f4 (MGP_PahariEiJ_G0030195) #24 Armh4 (MGP_PahariEiJ_G0030196) #25 Or4n5 (MGP_PahariEiJ_G0030197) #26 MGP_PahariEiJ_G0030198 #28 MGP_PahariEiJ_G0030199 #28 MGP_PahariEiJ_G0030201 #31 MGP_PahariEiJ_G0030202 #31 Or4k1 (MGP_PahariEiJ_G0030203) #32 Or4k5 (MGP_PahariEiJ_G0030204) #33 Or4k2 (MGP_PahariEiJ_G0030205) #34 Or4k6 (MGP_PahariEiJ_G0030206) #35 Or4n4 (MGP_PahariEiJ_G0030207) #36 Or4n4b (MGP_PahariEiJ_G0030208) #37 Or4m1 (MGP_PahariEiJ_G0030209) Rat MODERN SPECIES 6 ENSRNOG00000070489 Gch1 (ENSRNOG00000011039) #8 Wdhd1 (ENSRNOG00000011167) #9 Socs4 (ENSRNOG00000068183) #10 Mapk1ip1l (ENSRNOG00000011611) #11 Lgals3 (ENSRNOG00000010645) #12 Dlgap5 (ENSRNOG00000010721) #13 Fbxo34 (ENSRNOG00000011704) #14 Atg14 (ENSRNOG00000011873) #15 Ktn1 (ENSRNOG00000012255) #16 Peli2 (ENSRNOG00000012363) #17 Tmem260 (ENSRNOG00000013353) #18 Otx2 (ENSRNOG00000065063) #19 Exoc5 (ENSRNOG00000013804) #20 Ap5m1 (ENSRNOG00000014148) #21 Naa30 (ENSRNOG00000014192) #22 Ccdc198 (ENSRNOG00000062766) #23 Slc35f4 (ENSRNOG00000014982) #24 ENSRNOG00000067796 Armh4 (ENSRNOG00000031849) #25 Or4n5 (ENSRNOG00000045711) #26 Or4l1 (ENSRNOG00000012491) #28 Or4k15c (ENSRNOG00000067438) #30 Or4k15 (ENSRNOG00000064001) #31 LOC100366095 (ENSRNOG00000066061) #32 Or4k1 (ENSRNOG00000069012) #32 Or4k5 (ENSRNOG00000012515) #33 Or4k2 (ENSRNOG00000066232) #34 Or4k6 (ENSRNOG00000012526) #35 Or4n4 (ENSRNOG00000047419) #36 Or4n4 (ENSRNOG00000065899) #37 Cricetidae ANCESTRAL SPECIES 15 ENSGT00940000157933 #7 ENSGT00390000013481.c.a #8 ENSGT00390000002030 #9 ENSGT00940000161456 #10 ENSGT00730000111340.g #11 ENSGT00940000157224 #12 ENSGT00940000158652 #13 ENSGT00530000064222.b #14 ENSGT00390000011854 #15 ENSGT00940000158237 #16 ENSGT00950000183050.b.a #17 ENSGT00390000013544 #18 ENSGT00940000155014 #19 ENSGT00390000012837 #20 ENSGT00390000006191 #21 ENSGT00390000005665 #22 ENSGT00390000001071 #23 ENSGT00390000008727.a.b #24 ENSGT00390000012816 #25 ENSGT00940000162920 #26 ENSGT00940000163035 #28 ENSGT00940000159214.q #31 ENSGT00940000159214.r #30 ENSGT00940000162669 #32 ENSGT00940000163286 #33 ENSGT00940000162171 #34 ENSGT00940000164116 #35 ENSGT00940000162873.m #36 ENSGT00940000162873.n #37 ENSGT00940000163142 ENSGT00940000163302 Cricetinae ANCESTRAL SPECIES 35 ENSGT00940000157933 #7 ENSGT00390000013481.c.a #8 ENSGT00390000002030 #9 ENSGT00940000161456 #10 ENSGT00730000111340.g #11 ENSGT00940000157224 #12 ENSGT00940000158652 #13 ENSGT00530000064222.b #14 ENSGT00390000011854 #15 ENSGT00940000158237 #16 ENSGT00950000183050.b.a #17 ENSGT00390000013544 #18 ENSGT00940000155014 #19 ENSGT00390000012837 #20 ENSGT00390000006191 #21 ENSGT00390000005665 #22 ENSGT00390000001071 #23 ENSGT00390000008727.a.b #24 ENSGT00390000012816 #25 ENSGT00940000162920 #26 ENSGT00940000163035 #28 ENSGT00940000159214.q #31 ENSGT00940000159214.r #30 ENSGT00940000162669 #32 ENSGT00940000163286 #33 ENSGT00940000162171 #34 ENSGT00940000164116 #35 ENSGT00940000162873.m #36 ENSGT00940000162873.n #37 ENSGT00940000163142 ENSGT00940000163302 Chinese hamster chok1gshd MODERN SPECIES 238 Wdhd1 (ENSCGRG00001017601) #9 Socs4 (ENSCGRG00001014960) #10 Mapk1ip1l (ENSCGRG00001021476) #11 Lgals3 (ENSCGRG00001022933) #12 Dlgap5 (ENSCGRG00001023300) #13 Fbxo34 (ENSCGRG00001001721) #14 Atg14 (ENSCGRG00001009322) #15 Ktn1 (ENSCGRG00001017019) #16 ENSCGRG00001011709 Peli2 (ENSCGRG00001012222) #17 Tmem260 (ENSCGRG00001012591) #18 Otx2 (ENSCGRG00001013006) #19 ENSCGRG00001000079 Exoc5 (ENSCGRG00001004866) #20 Ap5m1 (ENSCGRG00001008439) #21 Naa30 (ENSCGRG00001009917) #22 ccdc198 (ENSCGRG00001010407) #23 Slc35f4 (ENSCGRG00001011650) #24 Armh4 (ENSCGRG00001012698) #25 Or4n5 (ENSCGRG00001014764) #26 ENSCGRG00001014883 #28 ENSCGRG00001014511 #28 Or4k15 (ENSCGRG00001014597) #31 ENSCGRG00001013567 ENSCGRG00001013986 ENSCGRG00001014897 #30 Or4k1 (ENSCGRG00001014641) #32 Or4k5 (ENSCGRG00001014524) #33 Or4k2 (ENSCGRG00001014751) #34 Or4k6 (ENSCGRG00001014606) #35 Or4n4 (ENSCGRG00001014428) #36 Golden Hamster MODERN SPECIES 815 Lgals3 (ENSMAUG00000010860) #12 Dlgap5 (ENSMAUG00000015294) #13 Fbxo34 (ENSMAUG00000011266) #14 Atg14 (ENSMAUG00000012773) #15 ENSMAUG00000014509 Ktn1 (ENSMAUG00000000647) #16 Peli2 (ENSMAUG00000015782) #17 Tmem260 (ENSMAUG00000006116) #18 Otx2 (ENSMAUG00000018184) #19 ENSMAUG00000018832 Exoc5 (ENSMAUG00000009486) #20 Ap5m1 (ENSMAUG00000009047) #21 Naa30 (ENSMAUG00000010236) #22 ccdc198 (ENSMAUG00000013689) #23 Slc35f4 (ENSMAUG00000015243) #24 Cricetidae_B ANCESTRAL SPECIES 11 ENSGT00940000157933 #7 ENSGT00390000013481.c.a #8 ENSGT00390000002030 #9 ENSGT00940000161456 #10 ENSGT00730000111340.g #11 ENSGT00940000157224 #12 ENSGT00940000158652 #13 ENSGT00530000064222.b #14 ENSGT00390000011854 #15 ENSGT00940000158237 #16 ENSGT00950000183050.b.a #17 ENSGT00390000013544 #18 ENSGT00940000155014 #19 ENSGT00390000012837 #20 ENSGT00390000006191 #21 ENSGT00390000005665 #22 ENSGT00390000001071 #23 ENSGT00390000008727.a.b #24 ENSGT00390000012816 #25 ENSGT00940000162920 #26 ENSGT00940000163035 #28 ENSGT00940000159214.q #31 ENSGT00940000159214.r #30 ENSGT00940000162669 #32 ENSGT00940000163286 #33 ENSGT00940000164116 #35 ENSGT00940000162873.m #36 ENSGT00940000162873.n #37 ENSGT00940000163142 ENSGT00940000163302 ENSGT00940000163623 Northern American deer mouse MODERN SPECIES 22 Wdhd1 (ENSPEMG00000009680) #9 Socs4 (ENSPEMG00000002858) #10 Mapk1ip1l (ENSPEMG00000024472) #11 Lgals3 (ENSPEMG00000001219) #12 ENSPEMG00000028434 Fbxo34 (ENSPEMG00000028511) #14 Atg14 (ENSPEMG00000011521) #15 Ktn1 (ENSPEMG00000015219) #16 Peli2 (ENSPEMG00000020035) #17 Tmem260 (ENSPEMG00000019694) #18 ENSPEMG00000031312 ENSPEMG00000015172 Otx2 (ENSPEMG00000030021) #19 Exoc5 (ENSPEMG00000006593) #20 Ap5m1 (ENSPEMG00000005193) #21 Naa30 (ENSPEMG00000000643) #22 ccdc198 (ENSPEMG00000023177) #23 Slc35f4 (ENSPEMG00000022040) #24 Armh4 (ENSPEMG00000013648) #25 Or4n5 (ENSPEMG00000027035) #26 Or4k15 (ENSPEMG00000028685) #31 ENSPEMG00000000099 ENSPEMG00000027008 #30 Or4k1 (ENSPEMG00000028903) #32 Or4k5 (ENSPEMG00000027911) #33 Or4k6 (ENSPEMG00000012647) #35 Or4n4 (ENSPEMG00000027310) #36 Or4n4b (ENSPEMG00000024346) #37 Or4m1 (ENSPEMG00000014323) Or4q3 (ENSPEMG00000008919) Tlr11 (ENSPEMG00000000254) Prairie vole MODERN SPECIES 4 Samd4 (ENSMOCG00000014893) #7 Gch1 (ENSMOCG00000022270) #8 Wdhd1 (ENSMOCG00000013032) #9 Socs4 (ENSMOCG00000000093) #10 Mapk1ip1l (ENSMOCG00000000105) #11 Lgals3 (ENSMOCG00000022866) #12 Dlgap5 (ENSMOCG00000021523) #13 Fbxo34 (ENSMOCG00000006547) #14 Atg14 (ENSMOCG00000000144) #15 ENSMOCG00000006238 ENSMOCG00000011281 #19 ENSMOCG00000007409 Exoc5 (ENSMOCG00000019782) #20 Ap5m1 (ENSMOCG00000021173) #21 ENSMOCG00000006129 Naa30 (ENSMOCG00000013852) #22 ccdc198 (ENSMOCG00000009305) #23 Slc35f4 (ENSMOCG00000007286) #24 Armh4 (ENSMOCG00000015938) #25 Upper Galilee mountains blind mole rat MODERN SPECIES 1068 Wdhd1 (ENSNGAG00000019249) #9 Socs4 (ENSNGAG00000016338) #10 ENSNGAG00000002812 #11 Lgals3 (ENSNGAG00000020150) #12 ENSNGAG00000019620 Fbxo34 (ENSNGAG00000016745) #14 Atg14 (ENSNGAG00000021004) #15 Tbpl2 (ENSNGAG00000002908) Ktn1 (ENSNGAG00000014640) #16 ENSNGAG00000003555 Peli2 (ENSNGAG00000011043) #17 Tmem260 (ENSNGAG00000001126) #18 Otx2 (ENSNGAG00000015521) #19 Exoc5 (ENSNGAG00000000258) #20 Ap5m1 (ENSNGAG00000010113) #21 Naa30 (ENSNGAG00000007396) #22 ccdc198 (ENSNGAG00000016223) #23 Slc35f4 (ENSNGAG00000017272) #24 Armh4 (ENSNGAG00000008903) #25 ENSNGAG00000019693 Actr10 (ENSNGAG00000020352) ENSNGAG00000012537 Arid4a (ENSNGAG00000015701) Timm9 (ENSNGAG00000012518) 2700049A03Rik (ENSNGAG00000018580) ENSNGAG00000008848 Dact1 (ENSNGAG00000016582) Daam1 (ENSNGAG00000011448) Gpr135 (ENSNGAG00000018914) ENSNGAG00000014758 L3hypdh (ENSNGAG00000011558) Lesser Egyptian jerboa MODERN SPECIES 41 Gch1 (ENSJJAG00000018620) #8 Wdhd1 (ENSJJAG00000001164) #9 Socs4 (ENSJJAG00000000581) #10 ENSJJAG00000017492 #11 Lgals3 (ENSJJAG00000011463) #12 ENSJJAG00000018716 Fbxo34 (ENSJJAG00000003125) #14 Atg14 (ENSJJAG00000000490) #15 Tbpl2 (ENSJJAG00000003838) Ktn1 (ENSJJAG00000013869) #16 Peli2 (ENSJJAG00000003968) #17 Tmem260 (ENSJJAG00000012902) #18 Otx2 (ENSJJAG00000012995) #19 Exoc5 (ENSJJAG00000024175) #20 Ap5m1 (ENSJJAG00000011637) #21 Naa30 (ENSJJAG00000024025) #22 ccdc198 (ENSJJAG00000008303) #23 Slc35f4 (ENSJJAG00000001648) #24 ENSJJAG00000013603 Armh4 (ENSJJAG00000017470) #25 Actr10 (ENSJJAG00000018421) ENSJJAG00000001749 Arid4a (ENSJJAG00000016742) Timm9 (ENSJJAG00000007980) 2700049A03Rik (ENSJJAG00000003167) Dact1 (ENSJJAG00000023135) Daam1 (ENSJJAG00000018690) Gpr135 (ENSJJAG00000022088) L3hypdh (ENSJJAG00000022907) ENSJJAG00000018222 ENSJJAG00000002864 Kangaroo rat MODERN SPECIES 335 Gch1 (ENSDORG00000007760) #8 Wdhd1 (ENSDORG00000028674) #9 Socs4 (ENSDORG00000001293) #10 ENSDORG00000027672 #11 ENSDORG00000028754 ENSDORG00000027913 Fbxo34 (ENSDORG00000027170) #14 Atg14 (ENSDORG00000029414) #15 Tbpl2 (ENSDORG00000003307) Ktn1 (ENSDORG00000013437) #16 Peli2 (ENSDORG00000025308) #17 Tmem260 (ENSDORG00000002945) #18 ENSDORG00000028570 #19 Exoc5 (ENSDORG00000009057) #20 Ap5m1 (ENSDORG00000009064) #21 Naa30 (ENSDORG00000007889) #22 ccdc198 (ENSDORG00000007890) #23 Slc35f4 (ENSDORG00000007892) #24 Rodentia_A ANCESTRAL SPECIES 2 ENSGT00390000013481.c.a #8 ENSGT00390000002030 #9 ENSGT00940000161456 #10 ENSGT00730000111340 #11 ENSGT00940000157224 #12 ENSGT00940000158652 #13 ENSGT00530000064222.b #14 ENSGT00390000011854 #15 ENSGT00940000159561 ENSGT00940000158237 #16 ENSGT00950000183050.b.a #17 ENSGT00390000013544 #18 ENSGT00940000155014 #19 ENSGT00390000012837 #20 ENSGT00390000006191 #21 ENSGT00390000005665 #22 ENSGT00390000001071 #23 ENSGT00390000008727.a.b #24 ENSGT00390000012816 #25 ENSGT00910000144250 ENSGT00550000074912 ENSGT00940000156159 ENSGT00390000011698.c.b ENSGT00940000160102 ENSGT00390000012397 ENSGT00950000183181.B.a ENSGT00940000156452 ENSGT00950000182998.A ENSGT00390000002032 ENSGT00390000018097 ENSGT00390000001277 Hystricomorpha ANCESTRAL SPECIES 33 ENSGT00950000183050.b.a #17 ENSGT00390000013544 #18 ENSGT00940000155014 #19 ENSGT00390000012837 #20 ENSGT00390000006191 #21 ENSGT00390000005665 #22 ENSGT00390000001071 #23 ENSGT00390000008727.a.b #24 ENSGT00390000012816 #25 ENSGT00910000144250 ENSGT00550000074912 ENSGT00940000156159 ENSGT00940000160102.p ENSGT00390000012397 ENSGT00950000183181.B.a ENSGT00940000156452 ENSGT00950000182998.A ENSGT00390000002032 ENSGT00390000018097 ENSGT00390000001277 ENSGT00940000155077.e.a Hystricomorpha_a ANCESTRAL SPECIES 27 ENSGT00940000153304.B ENSGT00390000002319 ENSGT00940000160820 ENSGT00940000156487 ENSGT00940000160091 ENSGT00390000010439 ENSGT00940000154832.m.a ENSGT00940000155226.q.a.d ENSGT00940000156899 ENSGT00940000158583 ENSGT00950000183050.b.a #17 ENSGT00390000013544 #18 ENSGT00940000155014 #19 ENSGT00390000012837 #20 ENSGT00390000006191 #21 ENSGT00390000005665 #22 ENSGT00390000001071 #23 ENSGT00390000008727.a.b #24 ENSGT00390000012816 #25 ENSGT00910000144250 ENSGT00550000074912 ENSGT00940000156159 ENSGT00940000160102.p ENSGT00390000012397 ENSGT00950000183181.B.a ENSGT00940000156452 ENSGT00950000182998.A ENSGT00390000002032 ENSGT00390000018097 ENSGT00390000001277 ENSGT00940000155077.e.a Hystricomorpha_b ANCESTRAL SPECIES 46 ENSGT00940000153304.B ENSGT00390000002319 ENSGT00940000160820 ENSGT00940000156487 ENSGT00940000160091 ENSGT00390000010439 ENSGT00940000154832.m.a ENSGT00940000155226.q.a.d ENSGT00940000156899 ENSGT00940000158583 ENSGT00950000183050.b.a #17 ENSGT00390000013544 #18 ENSGT00940000155014 #19 ENSGT00390000012837 #20 ENSGT00390000006191 #21 ENSGT00390000005665 #22 ENSGT00390000001071 #23 ENSGT00390000008727.a.b #24 ENSGT00390000012816 #25 ENSGT00910000144250 ENSGT00550000074912 ENSGT00940000156159 ENSGT00940000160102.o.a ENSGT00390000012397 ENSGT00950000183181.B.a ENSGT00940000156452 ENSGT00950000182998.A ENSGT00390000002032 ENSGT00390000018097 ENSGT00390000001277 ENSGT00940000155077.e.a Long-tailed chinchilla MODERN SPECIES 173 SIX1 (ENSCLAG00000003638) SIX6 (ENSCLAG00000003715) C14orf39 (ENSCLAG00000004039) ENSCLAG00000004367 ENSCLAG00000004431 ENSCLAG00000003437 PCNX4 (ENSCLAG00000003900) LRRC9 (ENSCLAG00000004301) PELI2 (ENSCLAG00000005349) #17 ENSCLAG00000005588 TMEM260 (ENSCLAG00000004193) #18 ENSCLAG00000004270 OTX2 (ENSCLAG00000004839) #19 EXOC5 (ENSCLAG00000005217) #20 AP5M1 (ENSCLAG00000006373) #21 NAA30 (ENSCLAG00000002822) #22 CCDC198 (ENSCLAG00000002962) #23 SLC35F4 (ENSCLAG00000003156) #24 ARMH4 (ENSCLAG00000003534) #25 ACTR10 (ENSCLAG00000003957) PSMA3 (ENSCLAG00000004169) ENSCLAG00000003914 TIMM9 (ENSCLAG00000004069) KIAA0586 (ENSCLAG00000004355) ENSCLAG00000005082 DACT1 (ENSCLAG00000005231) DAAM1 (ENSCLAG00000005812) GPR135 (ENSCLAG00000003808) L3HYPDH (ENSCLAG00000003825) JKAMP (ENSCLAG00000004418) CCDC175 (ENSCLAG00000004873) Degu MODERN SPECIES 48 ENSODEG00000014677 SIX1 (ENSODEG00000014839) SIX6 (ENSODEG00000015945) C14orf39 (ENSODEG00000013986) PPM1A (ENSODEG00000013831) DHRS7 (ENSODEG00000014507) PCNX4 (ENSODEG00000014733) LRRC9 (ENSODEG00000014066) ENSODEG00000014825 ENSODEG00000020144 PELI2 (ENSODEG00000015305) #17 TMEM260 (ENSODEG00000014526) #18 OTX2 (ENSODEG00000016325) #19 ENSODEG00000014704 #20 AP5M1 (ENSODEG00000014310) #21 NAA30 (ENSODEG00000014442) #22 CCDC198 (ENSODEG00000015422) #23 SLC35F4 (ENSODEG00000014001) #24 ENSODEG00000014617 ENSODEG00000014244 ENSODEG00000014881 ENSODEG00000014309 ENSODEG00000014880 ENSODEG00000014925 DACT1 (ENSODEG00000014574) ENSODEG00000015435 DAAM1 (ENSODEG00000014128) L3HYPDH (ENSODEG00000015887) JKAMP (ENSODEG00000014669) ENSODEG00000014803 ENSODEG00000014970 Naked mole-rat female DUPLICATION Naked mole-rat female MODERN SPECIES 18 ENSHGLG00000045288 ENSHGLG00000040249 ENSHGLG00000040598 ENSHGLG00000034091 ENSHGLG00000002898 ENSHGLG00000019812 ENSHGLG00000044689 ENSHGLG00000002091 #17 ENSHGLG00000046837 TMEM260 (ENSHGLG00000001463) #18 OTX2 (ENSHGLG00000003359) #19 ENSHGLG00000014776 EXOC5 (ENSHGLG00000006826) #20 AP5M1 (ENSHGLG00000001369) #21 ENSHGLG00000040983 #22 CCDC198 (ENSHGLG00000001456) #23 SLC35F4 (ENSHGLG00000002649) #24 ENSHGLG00000046462 ARMH4 (ENSHGLG00000002733) #25 ACTR10 (ENSHGLG00000002598) ENSHGLG00000037877 ENSHGLG00000009085 ENSHGLG00000036546 ARID4A (ENSHGLG00000001903) ENSHGLG00000034425 ENSHGLG00000002378 ENSHGLG00000042053 KIAA0586 (ENSHGLG00000003054) ENSHGLG00000037363 DACT1 (ENSHGLG00000001348) Naked mole-rat female MODERN SPECIES 5 DAPK1 (ENSHGLG00000017803) GOLM1 (ENSHGLG00000017786) NAA35 (ENSHGLG00000017763) AGTPBP1 (ENSHGLG00000017732) ENSHGLG00000039492 ENSHGLG00000039873 NTRK2 (ENSHGLG00000017693) SLC28A3 (ENSHGLG00000017777) ENSHGLG00000033908 RMI1 (ENSHGLG00000048963) ENSHGLG00000036726 ENSHGLG00000048823 ENSHGLG00000032986 ENSHGLG00000018511 ENSHGLG00000034355 ENSHGLG00000032822 #22 ENSHGLG00000032554 ENSHGLG00000041886 ENSHGLG00000015082 ENSHGLG00000038468 ENSHGLG00000043806 ENSHGLG00000036160 ENSHGLG00000008611 ENSHGLG00000007961 ENSHGLG00000045604 ENSHGLG00000007650 ENSHGLG00000039891 ENSHGLG00000011425 ENSHGLG00000006237 ENSHGLG00000035355 SLC25A40 (ENSHGLG00000005541) Sciuridae ANCESTRAL SPECIES 8 ENSGT00940000161456 #10 ENSGT00730000111340 #11 ENSGT00940000157224 #12 ENSGT01010000222666 ENSGT00940000158652 #13 ENSGT00530000064222.b #14 ENSGT00390000011854 #15 ENSGT00940000159561 ENSGT00940000158237 #16 ENSGT00950000183050.b.a #17 ENSGT00390000013544 #18 ENSGT00940000155014 #19 ENSGT01010000230324 ENSGT00390000012837 #20 ENSGT00390000006191 #21 ENSGT00390000005665 #22 ENSGT00390000001071 #23 ENSGT00390000008727.a.b #24 ENSGT00390000012816 #25 ENSGT00910000144250 ENSGT00550000074912 ENSGT00940000156159 ENSGT00390000011698.c.b ENSGT00940000160102 ENSGT00390000012397 ENSGT00950000183181.B.a ENSGT00940000156452 ENSGT00950000182998.A ENSGT00390000002032 ENSGT00390000018097 ENSGT00390000001277 Marmotini ANCESTRAL SPECIES 15 ENSGT00940000161456 #10 ENSGT00730000111340 #11 ENSGT00940000157224 #12 ENSGT01010000222666 ENSGT00530000064222.b #14 ENSGT00390000011854 #15 ENSGT00940000159561 ENSGT00940000158237 #16 ENSGT00390000006178.gb ENSGT00950000183050.b.a #17 ENSGT00390000013544 #18 ENSGT00940000155014 #19 ENSGT01010000230324 ENSGT00390000012837 #20 ENSGT00390000006191 #21 ENSGT00390000005665 #22 ENSGT00390000001071 #23 ENSGT00390000008727.a.b #24 ENSGT00390000012816 #25 ENSGT00910000144250 ENSGT00550000074912 ENSGT00940000156159 ENSGT00390000011698.c.b ENSGT00940000160102 ENSGT00390000012397 ENSGT00950000183181.B.a ENSGT00940000156452 ENSGT00950000182998.A ENSGT00390000002032 ENSGT00390000018097 ENSGT00390000001277 Marmotini_b ANCESTRAL SPECIES 14 ENSGT00390000002030 #9 ENSGT00940000161456 #10 ENSGT00730000111340 #11 ENSGT00940000157224 #12 ENSGT01010000222666 ENSGT00530000064222.b #14 ENSGT00390000011854 #15 ENSGT00940000159561 ENSGT00940000158237 #16 ENSGT00390000006178.gb ENSGT00950000183050.b.a #17 ENSGT00390000013544 #18 ENSGT00940000155014 #19 ENSGT00390000012837 #20 ENSGT00390000006191.e #21 ENSGT00390000005665 #22 ENSGT00390000001071 #23 ENSGT00390000008727.a.b #24 ENSGT00390000012816 #25 ENSGT00910000144250 ENSGT00550000074912 ENSGT00940000156159 ENSGT00390000011698.c.b ENSGT00940000160102 ENSGT00390000012397 ENSGT00950000183181.B.a ENSGT00940000156452 ENSGT00950000182998.A ENSGT00390000002032 ENSGT00390000018097 ENSGT00390000001277 Squirrel MODERN SPECIES 95 FBXO34 (ENSSTOG00000015182) #14 ATG14 (ENSSTOG00000027784) #15 TBPL2 (ENSSTOG00000015196) ENSSTOG00000030548 #16 ENSSTOG00000021980 ENSSTOG00000020034 PELI2 (ENSSTOG00000020268) #17 TMEM260 (ENSSTOG00000012683) #18 OTX2 (ENSSTOG00000028544) #19 EXOC5 (ENSSTOG00000024424) #20 ENSSTOG00000011073 #21 NAA30 (ENSSTOG00000011080) #22 CCDC198 (ENSSTOG00000010860) #23 SLC35F4 (ENSSTOG00000010865) #24 ARMH4 (ENSSTOG00000013525) #25 ACTR10 (ENSSTOG00000013532) PSMA3 (ENSSTOG00000013539) ARID4A (ENSSTOG00000019680) ENSSTOG00000031234 TIMM9 (ENSSTOG00000030979) KIAA0586 (ENSSTOG00000000221) DACT1 (ENSSTOG00000028057) ENSSTOG00000032385 DAAM1 (ENSSTOG00000003389) GPR135 (ENSSTOG00000003415) ENSSTOG00000030470 RTN1 (ENSSTOG00000023340) Arctic ground squirrel MODERN SPECIES 27 SOCS4 (ENSUPAG00010003145) #10 MAPK1IP1L (ENSUPAG00010003130) #11 LGALS3 (ENSUPAG00010003112) #12 ENSUPAG00010003095 FBXO34 (ENSUPAG00010003083) #14 ATG14 (ENSUPAG00010003072) #15 TBPL2 (ENSUPAG00010003064) ENSUPAG00010003052 KTN1 (ENSUPAG00010001418) #16 ENSUPAG00010001410 PELI2 (ENSUPAG00010001379) #17 TMEM260 (ENSUPAG00010001276) #18 OTX2 (ENSUPAG00010001231) #19 EXOC5 (ENSUPAG00010001129) #20 AP5M1 (ENSUPAG00010001100) #21 NAA30 (ENSUPAG00010001083) #22 CCDC198 (ENSUPAG00010001074) #23 SLC35F4 (ENSUPAG00010001052) #24 ARMH4 (ENSUPAG00010000968) #25 ACTR10 (ENSUPAG00010000951) PSMA3 (ENSUPAG00010000924) ARID4A (ENSUPAG00010000903) TOMM20L (ENSUPAG00010000888) TIMM9 (ENSUPAG00010000868) Alpin marmot MODERN SPECIES 7 ENSMMMG00000002883 FBXO34 (ENSMMMG00000002895) #14 ATG14 (ENSMMMG00000002906) #15 TBPL2 (ENSMMMG00000002943) ENSMMMG00000002960 KTN1 (ENSMMMG00000003061) #16 ENSMMMG00000005015 PELI2 (ENSMMMG00000005044) #17 TMEM260 (ENSMMMG00000005095) #18 ENSMMMG00000005191 OTX2 (ENSMMMG00000005205) #19 ENSMMMG00000005219 EXOC5 (ENSMMMG00000005231) #20 AP5M1 (ENSMMMG00000005334) #21 ENSMMMG00000005364 NAA30 (ENSMMMG00000005369) #22 CCDC198 (ENSMMMG00000005385) #23 SLC35F4 (ENSMMMG00000005414) #24 ARMH4 (ENSMMMG00000005430) #25 ACTR10 (ENSMMMG00000005466) PSMA3 (ENSMMMG00000005482) ARID4A (ENSMMMG00000005513) ENSMMMG00000005547 TIMM9 (ENSMMMG00000005557) KIAA0586 (ENSMMMG00000005607) DACT1 (ENSMMMG00000005720) DAAM1 (ENSMMMG00000005751) GPR135 (ENSMMMG00000005921) L3HYPDH (ENSMMMG00000005927) JKAMP (ENSMMMG00000005935) CCDC175 (ENSMMMG00000005957) Eurasian red squirrel MODERN SPECIES 11 WDHD1 (ENSSVLG00005004416) #9 SOCS4 (ENSSVLG00005004401) #10 ENSSVLG00005004383 #11 LGALS3 (ENSSVLG00005004351) #12 ENSSVLG00005004332 DLGAP5 (ENSSVLG00005004281) #13 FBXO34 (ENSSVLG00005004246) #14 ATG14 (ENSSVLG00005004233) #15 KTN1 (ENSSVLG00005003695) #16 PELI2 (ENSSVLG00005003386) #17 TMEM260 (ENSSVLG00005003323) #18 ENSSVLG00005003294 #19 ENSSVLG00005003276 EXOC5 (ENSSVLG00005003254) #20 AP5M1 (ENSSVLG00005003216) #21 NAA30 (ENSSVLG00005003191) #22 CCDC198 (ENSSVLG00005003166) #23 ENSSVLG00005003152 SLC35F4 (ENSSVLG00005003120) #24 ARMH4 (ENSSVLG00005003094) #25 ACTR10 (ENSSVLG00005003078) PSMA3 (ENSSVLG00005003023) ARID4A (ENSSVLG00005002973) TOMM20L (ENSSVLG00005002927) TIMM9 (ENSSVLG00005002892) KIAA0586 (ENSSVLG00005002832) DACT1 (ENSSVLG00005002770) ENSSVLG00005002748 ENSSVLG00005002731 ENSSVLG00005002714 DAAM1 (ENSSVLG00005002685) Lagomorpha ANCESTRAL SPECIES 14 ENSGT00390000013481.c.a #8 ENSGT00390000002030 #9 ENSGT00940000161456 #10 ENSGT00730000111340 #11 ENSGT00940000157224 #12 ENSGT00940000158652 #13 ENSGT00530000064222.b #14 ENSGT00390000011854 #15 ENSGT00940000159561 ENSGT00940000158237 #16 ENSGT00950000183050.b.a #17 ENSGT00390000013544 #18 ENSGT00940000155014 #19 ENSGT00390000012837 #20 ENSGT00390000006191 #21 ENSGT00390000005665 #22 ENSGT00390000001071 #23 ENSGT00390000008727.a.b #24 ENSGT00390000012816 #25 ENSGT00910000144250 ENSGT00550000074912 ENSGT00940000156159 ENSGT00390000011698.c.b ENSGT00940000160102 ENSGT00390000012397 Rabbit MODERN SPECIES 8 WDHD1 (ENSOCUG00000004987) #9 SOCS4 (ENSOCUG00000004006) #10 MAPK1IP1L (ENSOCUG00000004003) #11 LGALS3 (ENSOCUG00000002924) #12 DLGAP5 (ENSOCUG00000002926) #13 FBXO34 (ENSOCUG00000010779) #14 ATG14 (ENSOCUG00000014723) #15 TBPL2 (ENSOCUG00000014738) KTN1 (ENSOCUG00000010650) #16 PELI2 (ENSOCUG00000002611) #17 ENSOCUG00000016399 TMEM260 (ENSOCUG00000002619) #18 OTX2 (ENSOCUG00000002633) #19 ENSOCUG00000000756 #20 AP5M1 (ENSOCUG00000009782) #21 NAA30 (ENSOCUG00000008997) #22 CCDC198 (ENSOCUG00000015402) #23 SLC35F4 (ENSOCUG00000000541) #24 ENSOCUG00000030253 CDC34 (ENSOCUG00000022563) ARMH4 (ENSOCUG00000012279) #25 ACTR10 (ENSOCUG00000003358) PSMA3 (ENSOCUG00000010316) ARID4A (ENSOCUG00000001052) TOMM20L (ENSOCUG00000029717) TIMM9 (ENSOCUG00000007350) KIAA0586 (ENSOCUG00000007145) ENSOCUG00000025960 DACT1 (ENSOCUG00000015140) TUBGCP5 (ENSOCUG00000010715) CYFIP1 (ENSOCUG00000010732) Pika MODERN SPECIES 9682 NAA30 (ENSOPRG00000013198) #22