Chordata	ANCESTRAL SPECIES																	ENSGT00390000014084 #22
Vertebrata	ANCESTRAL SPECIES																	ENSGT00390000014084 #22
Gnathostomata	ANCESTRAL SPECIES	174								ENSGT00950000182976.a.a	ENSGT00880000138031 #37	ENSGT00940000162483 #16	ENSGT00950000182885.B #17	ENSGT00950000182885.C.b ##17	ENSGT00940000159081 #18	ENSGT00390000006088 #20	ENSGT00390000010777 #21	ENSGT00390000014084 #22	ENSGT01030000234578.B.a #23	ENSGT00390000006747 #24	ENSGT00950000183117.a.a #26	ENSGT00940000158254 #27	ENSGT00940000155067 #28	ENSGT00940000155118 #29
Euteleostomi	ANCESTRAL SPECIES	49						ENSGT00950000182976.a.a	ENSGT00880000138031 #37	ENSGT00940000164581.B	ENSGT00940000162483 #16	ENSGT00950000182885.B #17	ENSGT00950000182885.C.b ##17	ENSGT00940000159081 #18	ENSGT00390000004984 #19	ENSGT00390000006088 #20	ENSGT00390000010777 #21	ENSGT00390000014084 #22	ENSGT01030000234578.B.a #23	ENSGT00390000006747 #24	ENSGT00950000183117.a.a #26	ENSGT00940000158254 #27	ENSGT00940000155067.b ##28	ENSGT00940000155067.a #28	ENSGT00940000155118 #29	ENSGT00390000016813 #30	ENSGT00940000155166.A #31	ENSGT00940000158600 #32	ENSGT00940000159389 #34	ENSGT00940000158037 #35	ENSGT00940000158187 #36	ENSGT00390000018003.b	ENSGT00390000008702
Sarcopterygii	ANCESTRAL SPECIES	172									ENSGT00940000162483 #16	ENSGT00950000182885.B #17	ENSGT00950000182885.C.b ##17	ENSGT00940000159081 #18	ENSGT00390000004984 #19	ENSGT00390000006088 #20	ENSGT00390000010777 #21	ENSGT00390000014084 #22	ENSGT01030000234578.B.a #23	ENSGT00390000006747 #24	ENSGT00390000000062 #25	ENSGT00950000183117.a.a #26	ENSGT00940000158254 #27	ENSGT00940000155067.b ##28	ENSGT00940000155067.a #28	ENSGT00940000155118 #29	ENSGT00390000016813 #30	ENSGT00940000155166.A #31	ENSGT00940000158600 #32	ENSGT00940000159389 #34	ENSGT00940000158037 #35	ENSGT00940000158187 #36
Tetrapoda	ANCESTRAL SPECIES	5	ENSGT00940000160733 #8	ENSGT00940000158078 #9	ENSGT00390000000987 #10	ENSGT00390000007685 #11	ENSGT01020000230401.b.a #12	ENSGT00530000064216	ENSGT00940000158637 #13	ENSGT00940000156566 #14	ENSGT00940000162483 #16	ENSGT00950000182885.B #17	ENSGT00950000182885.C.b ##17	ENSGT00940000159081 #18	ENSGT00390000004984 #19	ENSGT00390000006088 #20	ENSGT00390000010777 #21	ENSGT00390000014084 #22	ENSGT01030000234578.B.a #23	ENSGT00390000006747 #24	ENSGT00390000000062 #25	ENSGT00950000183117.a.a #26	ENSGT00940000158254 #27	ENSGT00940000155067.a #28	ENSGT00940000155118 #29	ENSGT00390000016813 #30	ENSGT00940000155166.A #31	ENSGT00940000158600 #32	ENSGT00940000159389 #34	ENSGT00940000158037 #35	ENSGT00940000158187 #36	ENSGT00880000138031 #37	ENSGT00950000182976.a.a
Amniota	ANCESTRAL SPECIES	5	ENSGT00940000160733 #8	ENSGT00940000158078 #9	ENSGT00390000000987 #10	ENSGT00390000007685 #11	ENSGT01020000230401.b.a #12	ENSGT00530000064216	ENSGT00940000158637 #13	ENSGT00940000156566 #14	ENSGT00940000162483 #16	ENSGT00950000182885.B #17	ENSGT00950000182885.C.b ##17	ENSGT00940000159081 #18	ENSGT00390000004984 #19	ENSGT00390000006088 #20	ENSGT00390000010777 #21	ENSGT00390000014084 #22	ENSGT01030000234578.B.a #23	ENSGT00390000006747 #24	ENSGT00390000000062 #25	ENSGT00950000183117.a.a #26	ENSGT00940000158254 #27	ENSGT00940000155067.a #28	ENSGT00940000155118 #29	ENSGT00390000016813 #30	ENSGT00940000155166.A #31	ENSGT00940000158600 #32	ENSGT00940000159389 #34	ENSGT00940000158037 #35	ENSGT00940000158187 #36	ENSGT00880000138031 #37	ENSGT00950000182976.a.a
Mammalia	ANCESTRAL SPECIES	8	ENSGT00940000160733 #8	ENSGT00940000158078 #9	ENSGT00390000000987 #10	ENSGT00390000007685 #11	ENSGT01020000230401.b.a #12	ENSGT00530000064216	ENSGT00940000158637 #13	ENSGT00940000156566 #14	ENSGT00940000162483 #16	ENSGT00950000182885.B #17	ENSGT00950000182885.C.b ##17	ENSGT00940000159081 #18	ENSGT00390000004984 #19	ENSGT00390000006088 #20	ENSGT00390000010777 #21	ENSGT00390000014084 #22	ENSGT01030000234578.B.a #23	ENSGT00390000006747 #24	ENSGT00390000000062 #25	ENSGT00950000183117.a.a #26	ENSGT00940000158254 #27	ENSGT00940000155067.a #28	ENSGT00940000155118 #29	ENSGT00390000016813 #30	ENSGT00940000155166.A #31	ENSGT00940000158600 #32	ENSGT00940000159389 #34	ENSGT00940000158037 #35	ENSGT00940000158187 #36	ENSGT00880000138031 #37	ENSGT00950000182976.a.a
Theria	ANCESTRAL SPECIES	2	ENSGT00940000160733 #8	ENSGT00940000158078 #9	ENSGT00390000000987 #10	ENSGT00390000007685 #11	ENSGT01020000230401.b.a #12	ENSGT00530000064216	ENSGT00940000158637 #13	ENSGT00940000156566 #14	ENSGT00940000162483 #16	ENSGT00950000182885.B #17	ENSGT00950000182885.C.b ##17	ENSGT00940000159081 #18	ENSGT00390000004984 #19	ENSGT00390000006088 #20	ENSGT00390000010777 #21	ENSGT00390000014084 #22	ENSGT01030000234578.B.a #23	ENSGT00390000006747 #24	ENSGT00390000000062 #25	ENSGT00950000183117.a.a #26	ENSGT00940000158254 #27	ENSGT00940000155067.a #28	ENSGT00940000155118 #29	ENSGT00900000143486	ENSGT00390000016813 #30	ENSGT00940000155166.A #31	ENSGT00940000158600 #32	ENSGT00940000159389 #34	ENSGT00940000158037 #35	ENSGT00940000158187 #36	ENSGT00880000138031 #37
Eutheria	ANCESTRAL SPECIES	1	ENSGT00940000154917 #7	ENSGT00940000160733 #8	ENSGT00940000158078 #9	ENSGT00390000000987 #10	ENSGT00390000007685 #11	ENSGT01020000230401.b.a #12	ENSGT00530000064216	ENSGT00940000158637 #13	ENSGT00940000156566 #14	ENSGT00940000162483 #16	ENSGT00950000182885.B #17	ENSGT00940000159081 #18	ENSGT00390000004984 #19	ENSGT00390000006088 #20	ENSGT00390000010777 #21	ENSGT00390000014084 #22	ENSGT01030000234578.B.a #23	ENSGT00390000006747 #24	ENSGT00390000000062.x.a #25	ENSGT00950000183117.a.a #26	ENSGT00940000158254 #27	ENSGT00940000155067.a #28	ENSGT00940000155118 #29	ENSGT00900000143486	ENSGT00390000016813 #30	ENSGT00940000155166.A #31	ENSGT00940000158600 #32	ENSGT00940000159389 #34	ENSGT00940000158037 #35	ENSGT00940000158187 #36	ENSGT00880000138031 #37
Boreoeutheria	ANCESTRAL SPECIES	6	ENSGT00940000160733 #8	ENSGT00940000158078 #9	ENSGT00390000000987 #10	ENSGT00390000007685 #11	ENSGT01020000230401.b.a #12	ENSGT00530000064216	ENSGT00940000158637 #13	ENSGT00940000156566 #14	ENSGT00390000015477 #15	ENSGT00940000162483 #16	ENSGT00950000182885.B #17	ENSGT00940000159081 #18	ENSGT00390000004984 #19	ENSGT00390000006088 #20	ENSGT00390000010777 #21	ENSGT00390000014084 #22	ENSGT01030000234578.B.a #23	ENSGT00390000006747 #24	ENSGT00390000000062.x.a #25	ENSGT00950000183117.a.a #26	ENSGT00940000158254 #27	ENSGT00940000155067.a #28	ENSGT00940000155118 #29	ENSGT00900000143486	ENSGT00390000016813 #30	ENSGT00940000155166.A #31	ENSGT00940000158600 #32	ENSGT00940000159389 #34	ENSGT00940000158037 #35	ENSGT00940000158187 #36	ENSGT00880000138031 #37
Euarchontoglires	ANCESTRAL SPECIES	6	ENSGT00940000160733 #8	ENSGT00940000158078 #9	ENSGT00390000000987 #10	ENSGT00390000007685 #11	ENSGT01020000230401.b.a #12	ENSGT00530000064216	ENSGT00940000158637 #13	ENSGT00940000156566 #14	ENSGT00390000015477 #15	ENSGT00940000162483 #16	ENSGT00950000182885.B #17	ENSGT00940000159081 #18	ENSGT00390000004984 #19	ENSGT00390000006088 #20	ENSGT00390000010777 #21	ENSGT00390000014084 #22	ENSGT01030000234578.B.a #23	ENSGT00390000006747 #24	ENSGT00390000000062.x.a #25	ENSGT00950000183117.a.a #26	ENSGT00940000158254 #27	ENSGT00940000155067.a #28	ENSGT00940000155118 #29	ENSGT00900000143486	ENSGT00390000016813 #30	ENSGT00940000155166.A #31	ENSGT00940000158600 #32	ENSGT00940000159389 #34	ENSGT00940000158037 #35	ENSGT00940000158187 #36	ENSGT00880000138031 #37
Primates	ANCESTRAL SPECIES	6	ENSGT00940000160733 #8	ENSGT00940000158078 #9	ENSGT00390000000987 #10	ENSGT00390000007685 #11	ENSGT01020000230401.b.a #12	ENSGT00530000064216	ENSGT00940000158637 #13	ENSGT00940000156566 #14	ENSGT00390000015477 #15	ENSGT00940000162483 #16	ENSGT00950000182885.B #17	ENSGT00940000159081 #18	ENSGT00390000004984 #19	ENSGT00390000006088 #20	ENSGT00390000010777 #21	ENSGT00390000014084 #22	ENSGT01030000234578.B.a #23	ENSGT00390000006747 #24	ENSGT00390000000062.x.a #25	ENSGT00950000183117.a.a #26	ENSGT00940000158254 #27	ENSGT00940000155067.a #28	ENSGT00940000155118 #29	ENSGT00390000016813 #30	ENSGT00940000155166.A #31	ENSGT00940000158600 #32	ENSGT00940000159389 #34	ENSGT00940000158037 #35	ENSGT00940000158187 #36	ENSGT00880000138031 #37	ENSGT00950000182976.a.a
Haplorrhini	ANCESTRAL SPECIES	3	ENSGT00940000160733 #8	ENSGT00940000158078 #9	ENSGT00390000000987 #10	ENSGT00390000007685 #11	ENSGT01020000230401.b.a #12	ENSGT00530000064216	ENSGT00940000158637 #13	ENSGT00940000156566 #14	ENSGT00390000015477 #15	ENSGT00940000162483 #16	ENSGT00950000182885.B #17	ENSGT00940000159081 #18	ENSGT00390000004984 #19	ENSGT00390000006088 #20	ENSGT00390000010777 #21	ENSGT00390000014084 #22	ENSGT01030000234578.B.a #23	ENSGT00390000006747 #24	ENSGT00390000000062.x.a #25	ENSGT00950000183117.a.a #26	ENSGT00940000158254 #27	ENSGT00940000155067.a #28	ENSGT00940000155118 #29	ENSGT00390000016813 #30	ENSGT00940000155166.A #31	ENSGT00940000158600 #32	ENSGT00940000159389 #34	ENSGT00940000158037 #35	ENSGT00940000158187 #36	ENSGT00880000138031 #37	ENSGT00950000182976.a.a
Simiiformes	ANCESTRAL SPECIES	4	ENSGT00940000160733 #8	ENSGT00940000158078 #9	ENSGT00390000000987 #10	ENSGT00390000007685 #11	ENSGT01020000230401.b.a #12	ENSGT00530000064216	ENSGT00940000158637 #13	ENSGT00940000156566 #14	ENSGT00390000015477 #15	ENSGT00940000162483 #16	ENSGT00950000182885.B #17	ENSGT00940000159081 #18	ENSGT00390000004984 #19	ENSGT00390000006088 #20	ENSGT00390000010777 #21	ENSGT00390000014084 #22	ENSGT01030000234578.B.a #23	ENSGT00390000006747 #24	ENSGT00390000000062.x.a #25	ENSGT00950000183117.a.a #26	ENSGT00940000158254 #27	ENSGT00940000155067.a #28	ENSGT00940000155118 #29	ENSGT00390000016813 #30	ENSGT00940000155166.A #31	ENSGT00940000158600 #32	ENSGT00940000159389 #34	ENSGT00940000158037 #35	ENSGT00940000158187 #36	ENSGT00880000138031.j #37	ENSGT00950000182976.a.a
Catarrhini	ANCESTRAL SPECIES	4	ENSGT00940000160733 #8	ENSGT00940000158078 #9	ENSGT00390000000987 #10	ENSGT00390000007685 #11	ENSGT01020000230401.b.a.n #12	ENSGT00530000064216	ENSGT00940000158637 #13	ENSGT00940000156566 #14	ENSGT00390000015477 #15	ENSGT00940000162483 #16	ENSGT00950000182885.B #17	ENSGT00940000159081 #18	ENSGT00390000004984 #19	ENSGT00390000006088 #20	ENSGT00390000010777 #21	ENSGT00390000014084 #22	ENSGT01030000234578.B.a #23	ENSGT00390000006747 #24	ENSGT00390000000062.x.a #25	ENSGT00950000183117.a.a #26	ENSGT00940000158254 #27	ENSGT00940000155067.a.a.a ##28	ENSGT00940000155118 #29	ENSGT00390000016813 #30	ENSGT00940000155166.A #31	ENSGT00940000158600 #32	ENSGT00940000154632.q.a.a.a	ENSGT00940000159389 #34	ENSGT00390000014405.e.b #33	ENSGT00940000158037 #35	ENSGT00940000158187 #36
Hominoidea	ANCESTRAL SPECIES	5	ENSGT00940000154917 #7	ENSGT00940000160733 #8	ENSGT00940000158078 #9	ENSGT00390000000987 #10	ENSGT00390000007685 #11	ENSGT01020000230401.b.a.n #12	ENSGT00940000158637 #13	ENSGT00940000156566 #14	ENSGT00390000015477 #15	ENSGT00940000162483 #16	ENSGT00950000182885.B #17	ENSGT00940000159081 #18	ENSGT00390000004984 #19	ENSGT00390000006088 #20	ENSGT00390000010777 #21	ENSGT00390000014084 #22	ENSGT01030000234578.B.a #23	ENSGT00390000006747 #24	ENSGT00390000000062.x.a #25	ENSGT00950000183117.a.a #26	ENSGT00940000158254 #27	ENSGT00940000155067.a.a.b #28	ENSGT00940000155118 #29	ENSGT00390000016813 #30	ENSGT00940000155166.A #31	ENSGT00940000158600 #32	ENSGT00940000154632.q.a.a.a	ENSGT00940000159389 #34	ENSGT00390000014405.e.b #33	ENSGT00940000158037 #35	ENSGT00940000158187 #36
Hominidae	ANCESTRAL SPECIES	4	ENSGT00940000154917 #7	ENSGT00940000160733 #8	ENSGT00940000158078 #9	ENSGT00390000000987 #10	ENSGT00390000007685 #11	ENSGT01020000230401.b.a.n #12	ENSGT00940000158637 #13	ENSGT00940000156566 #14	ENSGT00390000015477 #15	ENSGT00940000162483 #16	ENSGT00950000182885.B #17	ENSGT00940000159081 #18	ENSGT00390000004984 #19	ENSGT00390000006088 #20	ENSGT00390000010777 #21	ENSGT00390000014084 #22	ENSGT01030000234578.B.a #23	ENSGT00390000006747 #24	ENSGT00390000000062.x.a #25	ENSGT00950000183117.a.a #26	ENSGT00940000158254 #27	ENSGT00940000155067.a.a.b #28	ENSGT00940000155118 #29	ENSGT00390000016813 #30	ENSGT00940000155166.A #31	ENSGT00940000158600 #32	ENSGT00940000159389 #34	ENSGT00390000014405.e.b #33	ENSGT00940000158037 #35	ENSGT00940000158187 #36	ENSGT00880000138031.j #37
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	5	ENSGT00940000154917 #7	ENSGT00940000160733 #8	ENSGT00940000158078 #9	ENSGT00390000000987.a #10	ENSGT00390000007685 #11	ENSGT01020000230401.b.a.n #12	ENSGT00940000158637 #13	ENSGT00940000156566 #14	ENSGT00390000015477 #15	ENSGT00940000162483 #16	ENSGT00950000182885.B #17	ENSGT00940000159081 #18	ENSGT00390000004984 #19	ENSGT00390000006088 #20	ENSGT00390000010777 #21	ENSGT00390000014084 #22	ENSGT01030000234578.B.a #23	ENSGT00390000006747 #24	ENSGT00390000000062.x.a #25	ENSGT00950000183117.a.a #26	ENSGT00940000158254 #27	ENSGT00940000155067.a.a.b #28	ENSGT00940000155118 #29	ENSGT00390000016813 #30	ENSGT00940000155166.A #31	ENSGT00940000158600 #32	ENSGT00940000159389 #34	ENSGT00390000014405.e.b #33	ENSGT00940000158037 #35	ENSGT00940000158187 #36	ENSGT00880000138031.j #37
Homo/Pan group	ANCESTRAL SPECIES	6	ENSGT00940000154917 #7	ENSGT00940000160733 #8	ENSGT00940000158078 #9	ENSGT00390000000987.a #10	ENSGT00390000007685 #11	ENSGT01020000230401.b.a.n #12	ENSGT00940000158637 #13	ENSGT00940000156566 #14	ENSGT00390000015477 #15	ENSGT00940000162483 #16	ENSGT00950000182885.B #17	ENSGT00940000159081 #18	ENSGT00390000004984 #19	ENSGT00390000006088 #20	ENSGT00390000010777 #21	ENSGT00390000014084 #22	ENSGT01030000234578.B.a #23	ENSGT00390000006747 #24	ENSGT00390000000062.x.a #25	ENSGT00950000183117.a.a #26	ENSGT00940000158254 #27	ENSGT00940000155067.a.a.b #28	ENSGT00940000155118 #29	ENSGT00390000016813 #30	ENSGT00940000155166.A #31	ENSGT00940000158600 #32	ENSGT00940000159389 #34	ENSGT00390000014405.e.b #33	ENSGT00940000158037 #35	ENSGT00940000158187 #36	ENSGT00880000138031.j #37
Pan	ANCESTRAL SPECIES	4	ENSGT00940000154917 #7	ENSGT00940000160733 #8	ENSGT00940000158078 #9	ENSGT00390000000987.a #10	ENSGT00390000007685 #11	ENSGT01020000230401.b.a.n #12	ENSGT00940000158637 #13	ENSGT00940000156566 #14	ENSGT00390000015477 #15	ENSGT00940000162483 #16	ENSGT00950000182885.B #17	ENSGT00940000159081 #18	ENSGT00390000004984 #19	ENSGT00390000006088 #20	ENSGT00390000010777 #21	ENSGT00390000014084 #22	ENSGT01030000234578.B.a #23	ENSGT00390000006747 #24	ENSGT00390000000062.x.a #25	ENSGT00950000183117.a.a #26	ENSGT00940000158254 #27	ENSGT00940000155067.a.a.b #28	ENSGT00940000155118 #29	ENSGT00390000016813 #30	ENSGT00940000155166.A #31	ENSGT00940000158600 #32	ENSGT00940000159389 #34	ENSGT00390000014405.e.b #33	ENSGT00940000158037 #35	ENSGT00940000158187 #36	ENSGT00880000138031.j #37
Bonobo	MODERN SPECIES	3	NFYB (ENSPPAG00000041525) #7	HCFC2 (ENSPPAG00000038379) #8	GLT8D2 (ENSPPAG00000029096) #9	TDG (ENSPPAG00000032037) #10	UQCC6 (ENSPPAG00000041703) #11	HSP90B1 (ENSPPAG00000038666) #12	NT5DC3 (ENSPPAG00000012277) #13	STAB2 (ENSPPAG00000043047) #14	ENSPPAG00000043418 #15	ASCL1 (ENSPPAG00000036317) #16	PAH (ENSPPAG00000011956) #17	ENSPPAG00000015292 #18	PMCH (ENSPPAG00000039828) #19	PARPBP (ENSPPAG00000036992) #20	NUP37 (ENSPPAG00000028253) #21	WASHC3 (ENSPPAG00000040130) #22	DRAM1 (ENSPPAG00000043812) #23	GNPTAB (ENSPPAG00000041156) #24	SYCP3 (ENSPPAG00000031232) #25	ENSPPAG00000029593 #26	MYBPC1 (ENSPPAG00000027978) #27	SPIC (ENSPPAG00000029437) #28	ARL1 (ENSPPAG00000034860) #29	UTP20 (ENSPPAG00000001381) #30	SLC5A8 (ENSPPAG00000038189) #31	ANO4 (ENSPPAG00000037910) #32	ENSPPAG00000042869 #33	GAS2L3 (ENSPPAG00000032303) #34	NR1H4 (ENSPPAG00000027056) #35	SLC17A8 (ENSPPAG00000041738) #36	SCYL2 (ENSPPAG00000032245) #37
Chimpanzee	MODERN SPECIES	3	NFYB (ENSPTRG00000051467) #7	HCFC2 (ENSPTRG00000005375) #8	GLT8D2 (ENSPTRG00000005374) #9	TDG (ENSPTRG00000052766) #10	UQCC6 (ENSPTRG00000029559) #11	HSP90B1 (ENSPTRG00000005372) #12	NT5DC3 (ENSPTRG00000005370) #13	STAB2 (ENSPTRG00000005368) #14	C12H12orf42 (ENSPTRG00000005367) #15	ASCL1 (ENSPTRG00000005366) #16	PAH (ENSPTRG00000005364) #17	IGF1 (ENSPTRG00000024078) #18	PMCH (ENSPTRG00000005361) #19	PARPBP (ENSPTRG00000005360) #20	NUP37 (ENSPTRG00000005359) #21	WASHC3 (ENSPTRG00000005358) #22	ENSPTRG00000045153	DRAM1 (ENSPTRG00000005357) #23	ENSPTRG00000031146	GNPTAB (ENSPTRG00000005356) #24	SYCP3 (ENSPTRG00000005355) #25	CHPT1 (ENSPTRG00000005354) #26	MYBPC1 (ENSPTRG00000005353) #27	SPIC (ENSPTRG00000005351) #28	ARL1 (ENSPTRG00000005350) #29	UTP20 (ENSPTRG00000005349) #30	SLC5A8 (ENSPTRG00000005348) #31	ANO4 (ENSPTRG00000005347) #32	GAS2L3 (ENSPTRG00000005346) #34	ENSPTRG00000051429 #33	NR1H4 (ENSPTRG00000005345) #35
Human	MODERN SPECIES	3	NFYB (ENSG00000120837) #7	HCFC2 (ENSG00000111727) #8	GLT8D2 (ENSG00000120820) #9	TDG (ENSG00000139372) #10	UQCC6 (ENSG00000204954) #11	HSP90B1 (ENSG00000166598) #12	NT5DC3 (ENSG00000111696) #13	STAB2 (ENSG00000136011) #14	C12orf42 (ENSG00000179088) #15	ASCL1 (ENSG00000139352) #16	PAH (ENSG00000171759) #17	IGF1 (ENSG00000017427) #18	PMCH (ENSG00000183395) #19	PARPBP (ENSG00000185480) #20	NUP37 (ENSG00000075188) #21	WASHC3 (ENSG00000120860) #22	DRAM1 (ENSG00000136048) #23	GNPTAB (ENSG00000111670) #24	SYCP3 (ENSG00000139351) #25	CHPT1 (ENSG00000111666) #26	MYBPC1 (ENSG00000196091) #27	SPIC (ENSG00000166211) #28	ARL1 (ENSG00000120805) #29	UTP20 (ENSG00000120800) #30	SLC5A8 (ENSG00000256870) #31	ANO4 (ENSG00000151572) #32	GAS2L3 (ENSG00000139354) #34	NR1H4 (ENSG00000012504) #35	SLC17A8 (ENSG00000179520) #36	SCYL2 (ENSG00000136021) #37	DEPDC4 (ENSG00000166153)
Gorilla	MODERN SPECIES	3	NFYB (ENSGGOG00000008866) #7	HCFC2 (ENSGGOG00000026557) #8	GLT8D2 (ENSGGOG00000015653) #9	TDG (ENSGGOG00000015648) #10	UQCC6 (ENSGGOG00000016103) #11	HSP90B1 (ENSGGOG00000001928) #12	NT5DC3 (ENSGGOG00000013865) #13	STAB2 (ENSGGOG00000002297) #14	C12orf42 (ENSGGOG00000006554) #15	ASCL1 (ENSGGOG00000005479) #16	PAH (ENSGGOG00000000928) #17	ENSGGOG00000004943 #18	PMCH (ENSGGOG00000009852) #19	PARPBP (ENSGGOG00000004290) #20	NUP37 (ENSGGOG00000004148) #21	WASHC3 (ENSGGOG00000014975) #22	DRAM1 (ENSGGOG00000003761) #23	ENSGGOG00000012314	GNPTAB (ENSGGOG00000009796) #24	SYCP3 (ENSGGOG00000002946) #25	CHPT1 (ENSGGOG00000007397) #26	MYBPC1 (ENSGGOG00000010147) #27	SPIC (ENSGGOG00000024597) #28	ARL1 (ENSGGOG00000010788) #29	UTP20 (ENSGGOG00000004904) #30	SLC5A8 (ENSGGOG00000004017) #31	ANO4 (ENSGGOG00000000193) #32	ENSGGOG00000038498 #33	GAS2L3 (ENSGGOG00000003196) #34	NR1H4 (ENSGGOG00000008137) #35	SLC17A8 (ENSGGOG00000016824) #36
Orangutan	MODERN SPECIES	3	HCFC2 (ENSPPYG00000029758) #8	GLT8D2 (ENSPPYG00000004891) #9	TDG (ENSPPYG00000004890) #10	C12H12orf73 (ENSPPYG00000004889) #11	HSP90B1 (ENSPPYG00000025854) #12	ENSPPYG00000004887	NT5DC3 (ENSPPYG00000004886) #13	STAB2 (ENSPPYG00000004885) #14	C12orf42 (ENSPPYG00000040555) #15	ASCL1 (ENSPPYG00000004884) #16	PAH (ENSPPYG00000004883) #17	ENSPPYG00000004882 #18	PMCH (ENSPPYG00000004881) #19	PARPBP (ENSPPYG00000004880) #20	NUP37 (ENSPPYG00000004879) #21	WASHC3 (ENSPPYG00000004878) #22	ENSPPYG00000037004 #23	GNPTAB (ENSPPYG00000004877) #24	SYCP3 (ENSPPYG00000004876) #25	CHPT1 (ENSPPYG00000004875) #26	MYBPC1 (ENSPPYG00000004874) #27	SPIC (ENSPPYG00000004873) #28	ENSPPYG00000004872 #29	UTP20 (ENSPPYG00000004871) #30	SLC5A8 (ENSPPYG00000004870) #31	ANO4 (ENSPPYG00000004869) #32	GAS2L3 (ENSPPYG00000004868) #34	ENSPPYG00000040948 ##33	NR1H4 (ENSPPYG00000004867) #35	SLC17A8 (ENSPPYG00000004866) #36	SCYL2 (ENSPPYG00000004865) #37
Gibbon	MODERN SPECIES		NFYB (ENSNLEG00000031438) #7	HCFC2 (ENSNLEG00000029553) #8	GLT8D2 (ENSNLEG00000006534) #9	TDG (ENSNLEG00000006532) #10	UQCC6 (ENSNLEG00000006530) #11	HSP90B1 (ENSNLEG00000006510) #12	NT5DC3 (ENSNLEG00000006502) #13	STAB2 (ENSNLEG00000006418) #14	C12orf42 (ENSNLEG00000006413) #15	ASCL1 (ENSNLEG00000031286) #16	PAH (ENSNLEG00000006396) #17	ENSNLEG00000006394 #18	PMCH (ENSNLEG00000006393) #19	PARPBP (ENSNLEG00000006377) #20	NUP37 (ENSNLEG00000033812) #21	WASHC3 (ENSNLEG00000006365) #22	DRAM1 (ENSNLEG00000006362) #23	GNPTAB (ENSNLEG00000006356) #24	SYCP3 (ENSNLEG00000006341) #25	CHPT1 (ENSNLEG00000006332) #26	MYBPC1 (ENSNLEG00000006235) #27	SPIC (ENSNLEG00000006232) #28	ARL1 (ENSNLEG00000006223) #29	UTP20 (ENSNLEG00000006166) #30	SLC5A8 (ENSNLEG00000006157) #31	ENSNLEG00000032249	ANO4 (ENSNLEG00000006128) #32	ENSNLEG00000028974 #33	GAS2L3 (ENSNLEG00000006116) #34	NR1H4 (ENSNLEG00000006093) #35	SLC17A8 (ENSNLEG00000006078) #36
Cercopithecidae	ANCESTRAL SPECIES	3	ENSGT00940000160733 #8	ENSGT00940000158078 #9	ENSGT00390000000987 #10	ENSGT00390000007685 #11	ENSGT01020000230401.b.a.n #12	ENSGT00530000064216	ENSGT00940000158637 #13	ENSGT00940000156566 #14	ENSGT00390000015477 #15	ENSGT00940000162483 #16	ENSGT00950000182885.B #17	ENSGT00940000159081 #18	ENSGT00390000004984 #19	ENSGT00390000006088 #20	ENSGT00390000010777 #21	ENSGT00390000014084 #22	ENSGT01030000234578.B.a #23	ENSGT00390000006747 #24	ENSGT00390000000062.x.a #25	ENSGT00950000183117.a.a #26	ENSGT00940000158254 #27	ENSGT00940000155067.a.a.a ##28	ENSGT00940000155118 #29	ENSGT00390000016813 #30	ENSGT00940000155166.A #31	ENSGT00940000158600 #32	ENSGT00940000154632.q.a.a.a	ENSGT00940000159389 #34	ENSGT00390000014405.e.b #33	ENSGT00940000158037 #35	ENSGT00940000158187 #36
Cercopithecinae	ANCESTRAL SPECIES	7	ENSGT00940000158078 #9	ENSGT00390000000987 #10	ENSGT00390000007685 #11	ENSGT01020000230401.b.a.n #12	ENSGT00530000064216	ENSGT00940000158637 #13	ENSGT00940000156566 #14	ENSGT00390000015477 #15	ENSGT00940000162483 #16	ENSGT00950000182885.B #17	ENSGT00940000163541.f	ENSGT00940000159081 #18	ENSGT00390000004984 #19	ENSGT00390000006088 #20	ENSGT00390000010777 #21	ENSGT00390000014084 #22	ENSGT01030000234578.B.a #23	ENSGT00390000006747 #24	ENSGT00390000000062.x.a.c #25	ENSGT00950000183117.a.a #26	ENSGT00940000158254 #27	ENSGT00940000155067.a.a.a ##28	ENSGT00940000155118 #29	ENSGT00390000016813 #30	ENSGT00940000155166.A #31	ENSGT00940000158600 #32	ENSGT00940000154632.q.a.a.a	ENSGT00940000159389 #34	ENSGT00390000014405.e.b #33	ENSGT00940000158037 #35	ENSGT00940000158187 #36
Vervet Monkey	MODERN SPECIES	2	UQCC6 (ENSCSAG00000003056) #11	HSP90B1 (ENSCSAG00000003114) #12	ENSCSAG00000003135	ENSCSAG00000003137	NT5DC3 (ENSCSAG00000003140) #13	STAB2 (ENSCSAG00000003237) #14	C12orf42 (ENSCSAG00000003284) #15	ENSCSAG00000003285	ASCL1 (ENSCSAG00000018938) #16	PAH (ENSCSAG00000003291) #17	ENSCSAG00000018935	IGF1 (ENSCSAG00000003294) #18	PMCH (ENSCSAG00000003297) #19	PARPBP (ENSCSAG00000003307) #20	NUP37 (ENSCSAG00000003314) #21	WASHC3 (ENSCSAG00000003320) #22	DRAM1 (ENSCSAG00000003324) #23	GNPTAB (ENSCSAG00000003332) #24	ENSCSAG00000003341 #25	CHPT1 (ENSCSAG00000003350) #26	MYBPC1 (ENSCSAG00000003356) #27	ENSCSAG00000003364 ##28	ARL1 (ENSCSAG00000003368) #29	UTP20 (ENSCSAG00000003388) #30	SLC5A8 (ENSCSAG00000003405) #31	ANO4 (ENSCSAG00000003436) #32	GAS2L3 (ENSCSAG00000003446) #34	NR1H4 (ENSCSAG00000003451) #35	SLC17A8 (ENSCSAG00000003460) #36	ENSCSAG00000003466 #37	ENSCSAG00000003470 #37
Cercopithecinae_a	ANCESTRAL SPECIES	7	ENSGT00390000000987 #10	ENSGT00390000007685 #11	ENSGT01020000230401.b.a.n #12	ENSGT00530000064216	ENSGT00940000158637 #13	ENSGT00940000156566 #14	ENSGT00950000183120.e.b.a.a.b.b.a.b.b	ENSGT00390000015477 #15	ENSGT00940000162483 #16	ENSGT00950000182885.B #17	ENSGT00940000163541.f	ENSGT00940000159081 #18	ENSGT00390000004984 #19	ENSGT00390000006088 #20	ENSGT00390000010777 #21	ENSGT00390000014084 #22	ENSGT01030000234578.B.a #23	ENSGT00390000006747 #24	ENSGT00390000000062.x.a.c #25	ENSGT00950000183117.a.a #26	ENSGT00940000158254 #27	ENSGT00940000155067.a.a.a ##28	ENSGT00940000155118 #29	ENSGT00910000147311	ENSGT00390000016813 #30	ENSGT00940000155166.A #31	ENSGT00940000158600 #32	ENSGT00940000154632.q.a.a.a	ENSGT00940000159389 #34	ENSGT00390000014405.e.b #33	ENSGT00940000158037 #35
Macaca	ANCESTRAL SPECIES	6	ENSGT00940000160733 #8	ENSGT00940000158078 #9	ENSGT00390000000987 #10	ENSGT00390000007685 #11	ENSGT01020000230401.b.a.n #12	ENSGT00940000158637 #13	ENSGT00940000156566 #14	ENSGT00950000183120.e.b.a.a.b.b.a.b.b	ENSGT00390000015477 #15	ENSGT00940000162483 #16	ENSGT00950000182885.B #17	ENSGT00940000159081 #18	ENSGT00390000004984 #19	ENSGT00390000006088 #20	ENSGT00390000010777 #21	ENSGT00390000014084 #22	ENSGT01030000234578.B.a #23	ENSGT00390000006747 #24	ENSGT00390000000062.x.a.c #25	ENSGT00950000183117.a.a #26	ENSGT00940000158254 #27	ENSGT00940000155067.a.a.a ##28	ENSGT00940000155118 #29	ENSGT00910000147311	ENSGT00390000016813 #30	ENSGT00940000155166.A #31	ENSGT00940000158600 #32	ENSGT00940000154632.q.a.a.a	ENSGT00940000159389 #34	ENSGT00390000014405.e.b #33	ENSGT00940000158037 #35
Pig-tailed macaque	MODERN SPECIES	206									ASCL1 (ENSMNEG00000037876) #16	PAH (ENSMNEG00000029880) #17	ENSMNEG00000037861	IGF1 (ENSMNEG00000006633) #18	PARPBP (ENSMNEG00000031242) #20	PMCH (ENSMNEG00000030449) #19	NUP37 (ENSMNEG00000036326) #21	WASHC3 (ENSMNEG00000035753) #22	DRAM1 (ENSMNEG00000045461) #23	GNPTAB (ENSMNEG00000041502) #24	ENSMNEG00000041521 #25	CHPT1 (ENSMNEG00000021213) #26	MYBPC1 (ENSMNEG00000030777) #27	ENSMNEG00000041759 ##28	ARL1 (ENSMNEG00000007067) #29	ENSMNEG00000010988	ENSMNEG00000030959	UTP20 (ENSMNEG00000037418) #30	SLC5A8 (ENSMNEG00000044791) #31	ANO4 (ENSMNEG00000035796) #32	ENSMNEG00000038922	GAS2L3 (ENSMNEG00000043688) #34	ENSMNEG00000034160 #33
Macaca_a	ANCESTRAL SPECIES	6	ENSGT00940000154917.e #7	ENSGT00940000160733 #8	ENSGT00940000158078 #9	ENSGT00390000000987 #10	ENSGT00390000007685 #11	ENSGT01020000230401.b.a.n #12	ENSGT00940000158637 #13	ENSGT00940000156566 #14	ENSGT00390000015477 #15	ENSGT00940000162483 #16	ENSGT00950000182885.B #17	ENSGT00940000159081 #18	ENSGT00390000004984 #19	ENSGT00390000006088 #20	ENSGT00390000010777 #21	ENSGT00390000014084 #22	ENSGT01030000234578.B.a #23	ENSGT00390000006747 #24	ENSGT00390000000062.x.a.c #25	ENSGT00950000183117.a.a #26	ENSGT00940000158254 #27	ENSGT00940000155067.a.a.a ##28	ENSGT00940000155118 #29	ENSGT00390000016813 #30	ENSGT00940000155166.A #31	ENSGT00940000158600 #32	ENSGT00950000183123.g.a.b.b.r.b.b.a	ENSGT00940000159389 #34	ENSGT00940000158037 #35	ENSGT00940000158187 #36	ENSGT00880000138031.j #37
Crab-eating macaque	MODERN SPECIES	2	HCFC2 (ENSMFAG00000036071) #8	GLT8D2 (ENSMFAG00000045735) #9	TDG (ENSMFAG00000000086) #10	UQCC6 (ENSMFAG00000053075) #11	HSP90B1 (ENSMFAG00000036813) #12	NT5DC3 (ENSMFAG00000039210) #13	ENSMFAG00000050445	STAB2 (ENSMFAG00000034494) #14	C12orf42 (ENSMFAG00000045014) #15	PAH (ENSMFAG00000036729) #17	IGF1 (ENSMFAG00000030766) #18	PMCH (ENSMFAG00000002836) #19	PARPBP (ENSMFAG00000007317) #20	ENSMFAG00000047246	NUP37 (ENSMFAG00000000710) #21	WASHC3 (ENSMFAG00000016561) #22	ENSMFAG00000065525	ENSMFAG00000057390	ENSMFAG00000059955	DRAM1 (ENSMFAG00000042396) #23	ENSMFAG00000060846	GNPTAB (ENSMFAG00000038457) #24	SYCP3 (ENSMFAG00000037508) #25	CHPT1 (ENSMFAG00000045187) #26	MYBPC1 (ENSMFAG00000038552) #27	ENSMFAG00000003748 ##28	ARL1 (ENSMFAG00000035725) #29	UTP20 (ENSMFAG00000037766) #30	SLC5A8 (ENSMFAG00000031305) #31	ENSMFAG00000031324	ANO4 (ENSMFAG00000036524) #32
Rhesus	MODERN SPECIES	2	TDG (ENSMMUG00000021291) #10	UQCC6 (ENSMMUG00000031591) #11	HSP90B1 (ENSMMUG00000023469) #12	ENSMMUG00000031594	STAB2 (ENSMMUG00000006347) #14	C11H12orf42 (ENSMMUG00000046226) #15	ASCL1 (ENSMMUG00000005747) #16	PAH (ENSMMUG00000011908) #17	ENSMMUG00000061953	IGF1 (ENSMMUG00000002235) #18	PMCH (ENSMMUG00000031601) #19	PARPBP (ENSMMUG00000005506) #20	ENSMMUG00000055385	NUP37 (ENSMMUG00000005504) #21	ENSMMUG00000061923	WASHC3 (ENSMMUG00000046478) #22	DRAM1 (ENSMMUG00000042077) #23	GNPTAB (ENSMMUG00000012562) #24	SYCP3 (ENSMMUG00000063989) #25	CHPT1 (ENSMMUG00000020877) #26	MYBPC1 (ENSMMUG00000020875) #27	ENSMMUG00000061260 ##28	ARL1 (ENSMMUG00000031610) #29	UTP20 (ENSMMUG00000012891) #30	SLC5A8 (ENSMMUG00000015134) #31	ENSMMUG00000055254	ANO4 (ENSMMUG00000018718) #32	GAS2L3 (ENSMMUG00000020360) #34	NR1H4 (ENSMMUG00000003571) #35	SLC17A8 (ENSMMUG00000017646) #36	SCYL2 (ENSMMUG00000023600) #37
Cercopithecinae_b	ANCESTRAL SPECIES	2	ENSGT00390000000987 #10	ENSGT00390000007685 #11	ENSGT01020000230401.b.a.n #12	ENSGT00530000064216	ENSGT00940000158637 #13	ENSGT00940000156566 #14	ENSGT00950000183120.e.b.a.a.b.b.a.b.b	ENSGT00390000015477 #15	ENSGT00940000162483 #16	ENSGT00950000182885.B #17	ENSGT00940000163541.f	ENSGT00940000159081 #18	ENSGT00390000004984 #19	ENSGT00390000006088 #20	ENSGT00390000010777 #21	ENSGT00390000014084 #22	ENSGT01030000234578.B.a #23	ENSGT00390000006747 #24	ENSGT00390000000062.x.a.c #25	ENSGT00950000183117.a.a #26	ENSGT00940000158254 #27	ENSGT00940000155067.a.a.a ##28	ENSGT00940000155118 #29	ENSGT00910000147311	ENSGT00390000016813 #30	ENSGT00940000155166.A #31	ENSGT00940000158600 #32	ENSGT00940000154632.q.a.a.a	ENSGT00940000159389 #34	ENSGT00390000014405.e.b #33	ENSGT00940000158037 #35
Olive baboon	MODERN SPECIES	19	TDG (ENSPANG00000016817) #10	UQCC6 (ENSPANG00000048898) #11	HSP90B1 (ENSPANG00000018017) #12	ENSPANG00000047864	NT5DC3 (ENSPANG00000019453) #13	STAB2 (ENSPANG00000021932) #14	C12orf42 (ENSPANG00000022132) #15	ASCL1 (ENSPANG00000006618) #16	ENSPANG00000038866	PAH (ENSPANG00000004048) #17	ENSPANG00000020657	IGF1 (ENSPANG00000004450) #18	PMCH (ENSPANG00000015925) #19	PARPBP (ENSPANG00000000345) #20	NUP37 (ENSPANG00000000344) #21	WASHC3 (ENSPANG00000003603) #22	DRAM1 (ENSPANG00000018238) #23	ENSPANG00000043079	ENSPANG00000049661	GNPTAB (ENSPANG00000000420) #24	SYCP3 (ENSPANG00000000419) #25	CHPT1 (ENSPANG00000004451) #26	MYBPC1 (ENSPANG00000009790) #27	ENSPANG00000045377	ENSPANG00000018239 ##28	UTP20 (ENSPANG00000020388) #30	ARL1 (ENSPANG00000018816) #29	SLC5A8 (ENSPANG00000006619) #31	ENSPANG00000045224	ANO4 (ENSPANG00000017946) #32	GAS2L3 (ENSPANG00000013394) #34
Cercopithecinae_d	ANCESTRAL SPECIES	5	ENSGT00940000158078 #9	ENSGT00390000000987 #10	ENSGT00390000007685 #11	ENSGT01020000230401.b.a.n #12	ENSGT00940000158637 #13	ENSGT00940000156566 #14	ENSGT00950000183120.e.b.a.a.b.b.a.b.b	ENSGT00390000015477 #15	ENSGT00940000162483 #16	ENSGT00950000182885.B #17	ENSGT00940000163541.f	ENSGT00940000159081 #18	ENSGT00390000004984 #19	ENSGT00390000006088 #20	ENSGT00390000010777 #21	ENSGT00390000014084 #22	ENSGT01030000234578.B.a #23	ENSGT00390000006747 #24	ENSGT00390000000062.x.a.c #25	ENSGT00950000183117.a.a #26	ENSGT00940000158254 #27	ENSGT00940000155067.a.a.a ##28	ENSGT00940000155118 #29	ENSGT00910000147311	ENSGT00390000016813 #30	ENSGT00940000155166.A #31	ENSGT00940000158600 #32	ENSGT00940000154632.q.a.a.a	ENSGT00940000159389 #34	ENSGT00390000014405.e.b #33	ENSGT00940000158037 #35
Sooty mangabey	MODERN SPECIES	406	HCFC2 (ENSCATG00000037842) #8	GLT8D2 (ENSCATG00000021378) #9	TDG (ENSCATG00000034796) #10	UQCC6 (ENSCATG00000039977) #11	HSP90B1 (ENSCATG00000015409) #12	NT5DC3 (ENSCATG00000017727) #13	STAB2 (ENSCATG00000043710) #14	ENSCATG00000003423	C12orf42 (ENSCATG00000041444) #15	ASCL1 (ENSCATG00000032568) #16	PAH (ENSCATG00000040707) #17	IGF1 (ENSCATG00000043495) #18	PMCH (ENSCATG00000040202) #19	PARPBP (ENSCATG00000040864) #20	NUP37 (ENSCATG00000042468) #21	WASHC3 (ENSCATG00000032623) #22	DRAM1 (ENSCATG00000034964) #23	GNPTAB (ENSCATG00000041157) #24	ENSCATG00000041189 #25	CHPT1 (ENSCATG00000040898) #26	MYBPC1 (ENSCATG00000036055) #27	ENSCATG00000039921 ##28	ARL1 (ENSCATG00000040389) #29	ENSCATG00000020659	UTP20 (ENSCATG00000035636) #30	SLC5A8 (ENSCATG00000021653) #31	ANO4 (ENSCATG00000039666) #32	GAS2L3 (ENSCATG00000040264) #34	ENSCATG00000035203 #33	NR1H4 (ENSCATG00000042241) #35	SLC17A8 (ENSCATG00000043531) #36
Drill	DUPLICATION
Drill	MODERN SPECIES	1326											ENSMLEG00000033951	OSR2 (ENSMLEG00000034070)	ENSMLEG00000038589	STK3 (ENSMLEG00000028343)	KCNS2 (ENSMLEG00000008880)	ENSMLEG00000032863 #22	NIPAL2 (ENSMLEG00000018604)	POP1 (ENSMLEG00000034986)	ENSMLEG00000000048	ERICH5 (ENSMLEG00000041974)	RPL30 (ENSMLEG00000036764)	ENSMLEG00000042330	MATN2 (ENSMLEG00000020381)	LAPTM4B (ENSMLEG00000037249)	ENSMLEG00000022228	MTDH (ENSMLEG00000031470)	TSPYL5 (ENSMLEG00000029503)
Drill	MODERN SPECIES	385													PMCH (ENSMLEG00000009068) #19	PARPBP (ENSMLEG00000000561) #20	NUP37 (ENSMLEG00000034328) #21	WASHC3 (ENSMLEG00000034166) #22	DRAM1 (ENSMLEG00000034073) #23	GNPTAB (ENSMLEG00000031358) #24	ENSMLEG00000030015 #25	CHPT1 (ENSMLEG00000026323) #26
Rhinopithecus	ANCESTRAL SPECIES	97	ENSGT00940000154917.e #7	ENSGT00940000160733 #8	ENSGT00940000158078 #9	ENSGT00390000000987 #10	ENSGT00390000007685 #11	ENSGT01020000230401.b.a.n #12	ENSGT00940000158637 #13	ENSGT00940000156566 #14	ENSGT00390000015477 #15	ENSGT00940000162483 #16	ENSGT00950000182885.B #17	ENSGT00940000159081 #18	ENSGT00390000004984 #19	ENSGT00390000006088 #20	ENSGT00390000010777 #21	ENSGT00390000014084 #22	ENSGT01030000234578.B.a #23	ENSGT00390000006747 #24	ENSGT00390000000062.x.a #25	ENSGT00950000183117.a.a #26	ENSGT00940000158254 #27	ENSGT00940000155067.a.a.a ##28	ENSGT00940000155118 #29	ENSGT00390000016813 #30	ENSGT00940000155166.A #31	ENSGT00940000158600 #32	ENSGT00940000159389 #34	ENSGT00390000014405.f.b ##33	ENSGT00940000158037 #35	ENSGT00940000158187 #36	ENSGT00880000138031.j #37
Golden snub-nosed monkey	MODERN SPECIES	2261															NUP37 (ENSRROG00000013547) #21	WASHC3 (ENSRROG00000029064) #22
Black snub-nosed monkey	DUPLICATION
Black snub-nosed monkey	MODERN SPECIES	32										ENSRBIG00000039514	ENSRBIG00000031283	OSR2 (ENSRBIG00000031817)	ENSRBIG00000035855	STK3 (ENSRBIG00000035317)	KCNS2 (ENSRBIG00000021207)	ENSRBIG00000042178 #22
Black snub-nosed monkey	MODERN SPECIES	1139									C12orf42 (ENSRBIG00000031878) #15	ASCL1 (ENSRBIG00000029242) #16	PAH (ENSRBIG00000032063) #17	IGF1 (ENSRBIG00000028264) #18	PMCH (ENSRBIG00000032987) #19	PARPBP (ENSRBIG00000034823) #20	NUP37 (ENSRBIG00000029758) #21	WASHC3 (ENSRBIG00000020039) #22	DRAM1 (ENSRBIG00000028415) #23	GNPTAB (ENSRBIG00000036140) #24
Platyrrhini	ANCESTRAL SPECIES	6	ENSGT00940000154917 #7	ENSGT00940000160733 #8	ENSGT00940000158078 #9	ENSGT00390000000987 #10	ENSGT00390000007685.a #11	ENSGT01020000230401.b.a #12	ENSGT00940000158637 #13	ENSGT00940000156566 #14	ENSGT00390000015477 #15	ENSGT00940000162483 #16	ENSGT00950000182885.B.j #17	ENSGT00940000159081 #18	ENSGT00390000004984 #19	ENSGT00390000006088 #20	ENSGT00390000010777 #21	ENSGT00390000014084 #22	ENSGT01030000234578.B.a #23	ENSGT00390000006747 #24	ENSGT00390000000062.x.a #25	ENSGT00950000183117.a.a #26	ENSGT00940000158254 #27	ENSGT00940000155067.a #28	ENSGT00940000155118 #29	ENSGT00390000016813 #30	ENSGT00940000155166.A #31	ENSGT00940000158600 #32	ENSGT00940000159389 #34	ENSGT00940000158037 #35	ENSGT00940000158187 #36	ENSGT00880000138031.i ##37	ENSGT00950000182976.a.a
Mas night monkey	DUPLICATION
Mas night monkey	MODERN SPECIES	844	NFYB (ENSANAG00000035324) #7	HCFC2 (ENSANAG00000032685) #8	GLT8D2 (ENSANAG00000006864) #9	TDG (ENSANAG00000037208) #10	UQCC6 (ENSANAG00000017797) #11	HSP90B1 (ENSANAG00000024001) #12	NT5DC3 (ENSANAG00000023542) #13	STAB2 (ENSANAG00000020182) #14	C12orf42 (ENSANAG00000019362) #15	ASCL1 (ENSANAG00000018134) #16	PAH (ENSANAG00000023054) #17	IGF1 (ENSANAG00000023154) #18	PMCH (ENSANAG00000024939) #19	PARPBP (ENSANAG00000023630) #20	ENSANAG00000021721 #21	WASHC3 (ENSANAG00000031537) #22	DRAM1 (ENSANAG00000025437) #23	GNPTAB (ENSANAG00000024914) #24	SYCP3 (ENSANAG00000023138) #25	CHPT1 (ENSANAG00000023069) #26	MYBPC1 (ENSANAG00000025760) #27	ENSANAG00000024431	SPIC (ENSANAG00000024577) #28	ARL1 (ENSANAG00000023491) #29	UTP20 (ENSANAG00000027152) #30	SLC5A8 (ENSANAG00000033997) #31	ANO4 (ENSANAG00000033189) #32	ENSANAG00000026695	ENSANAG00000025598	GAS2L3 (ENSANAG00000025902) #34	NR1H4 (ENSANAG00000030336) #35
Mas night monkey	MODERN SPECIES	1003				ENSANAG00000030795	ENSANAG00000026597	HTR1E (ENSANAG00000020260)	CGA (ENSANAG00000025451)	ZNF292 (ENSANAG00000023824)	SMIM8 (ENSANAG00000031913)	C6orf163 (ENSANAG00000020423)	ENSANAG00000036217	SLC35A1 (ENSANAG00000023414)	RARS2 (ENSANAG00000027711)	ORC3 (ENSANAG00000038422)	AKIRIN2 (ENSANAG00000030566)	ENSANAG00000027715 #22	SPACA1 (ENSANAG00000022733)	ENSANAG00000022019	RNGTT (ENSANAG00000022118)	ENSANAG00000001631	ENSANAG00000027710	SRSF12 (ENSANAG00000023238)	PM20D2 (ENSANAG00000028063)	GABRR2 (ENSANAG00000027407)	UBE2J1 (ENSANAG00000023523)	RRAGD (ENSANAG00000023087)	ENSANAG00000035891	ANKRD6 (ENSANAG00000035580)	LYRM2 (ENSANAG00000033734)	MDN1 (ENSANAG00000034484)	CASP8AP2 (ENSANAG00000021679)
Cebidae	ANCESTRAL SPECIES	2	ENSGT00940000154917 #7	ENSGT00940000160733 #8	ENSGT00940000158078 #9	ENSGT00390000000987 #10	ENSGT00390000007685.a #11	ENSGT01020000230401.b.a #12	ENSGT00940000158637 #13	ENSGT00940000156566 #14	ENSGT00390000015477 #15	ENSGT00940000162483 #16	ENSGT00950000182885.B.j #17	ENSGT00940000159081 #18	ENSGT00390000004984 #19	ENSGT00390000006088 #20	ENSGT00390000010777 #21	ENSGT00390000014084 #22	ENSGT01030000234578.B.a #23	ENSGT00390000006747 #24	ENSGT00390000000062.x.a #25	ENSGT00950000183117.a.a #26	ENSGT00940000158254 #27	ENSGT00940000155067.a #28	ENSGT00940000155118 #29	ENSGT00390000016813 #30	ENSGT00940000155166.A #31	ENSGT00940000158600 #32	ENSGT00940000159389 #34	ENSGT00940000158037 #35	ENSGT00940000158187 #36	ENSGT00880000138031.i ##37	ENSGT00950000182976.a.a
Cebidae_a	ANCESTRAL SPECIES	8	ENSGT00940000154917 #7	ENSGT00940000160733 #8	ENSGT00940000158078 #9	ENSGT00390000000987 #10	ENSGT00390000007685.a #11	ENSGT01020000230401.b.a #12	ENSGT00940000158637 #13	ENSGT00940000156566 #14	ENSGT00390000015477 #15	ENSGT00940000162483 #16	ENSGT00950000182885.B.j #17	ENSGT00940000159081 #18	ENSGT00390000004984 #19	ENSGT00390000006088 #20	ENSGT00390000010777 #21	ENSGT00390000014084 #22	ENSGT01030000234578.B.a #23	ENSGT00390000006747 #24	ENSGT00390000000062.x.a #25	ENSGT00950000183117.a.a #26	ENSGT00940000158254 #27	ENSGT00390000018868.A.c.b	ENSGT00940000155067.a #28	ENSGT00940000155118 #29	ENSGT00390000016813 #30	ENSGT00940000155166.A #31	ENSGT00940000158600 #32	ENSGT00940000159389 #34	ENSGT00940000158037 #35	ENSGT00940000158187 #36	ENSGT00880000138031.i ##37
Bolivian squirrel monkey	MODERN SPECIES	76	NFYB (ENSSBOG00000022557) #7	HCFC2 (ENSSBOG00000023555) #8	GLT8D2 (ENSSBOG00000015943) #9	TDG (ENSSBOG00000019964) #10	ENSSBOG00000032576 #11	HSP90B1 (ENSSBOG00000033824) #12	NT5DC3 (ENSSBOG00000034458) #13	STAB2 (ENSSBOG00000020613) #14	C12orf42 (ENSSBOG00000021155) #15	ASCL1 (ENSSBOG00000007080) #16	PAH (ENSSBOG00000030312) #17	IGF1 (ENSSBOG00000035766) #18	PMCH (ENSSBOG00000020355) #19	PARPBP (ENSSBOG00000034779) #20	NUP37 (ENSSBOG00000031438) #21	WASHC3 (ENSSBOG00000035765) #22	DRAM1 (ENSSBOG00000036041) #23	GNPTAB (ENSSBOG00000027264) #24	SYCP3 (ENSSBOG00000035026) #25	CHPT1 (ENSSBOG00000023502) #26	MYBPC1 (ENSSBOG00000024613) #27	ENSSBOG00000025315	SPIC (ENSSBOG00000031070) #28	ENSSBOG00000024352 #29	UTP20 (ENSSBOG00000035762) #30	SLC5A8 (ENSSBOG00000033836) #31	ENSSBOG00000031381	ANO4 (ENSSBOG00000031410) #32	GAS2L3 (ENSSBOG00000035385) #34	NR1H4 (ENSSBOG00000021182) #35	SLC17A8 (ENSSBOG00000035794) #36
Capuchin	MODERN SPECIES	18											ENSCCAG00000024281 #17	IGF1 (ENSCCAG00000036468) #18	PMCH (ENSCCAG00000034254) #19	PARPBP (ENSCCAG00000023389) #20	NUP37 (ENSCCAG00000023761) #21	WASHC3 (ENSCCAG00000024202) #22	DRAM1 (ENSCCAG00000030755) #23	GNPTAB (ENSCCAG00000030235) #24	ENSCCAG00000020303 #25	CHPT1 (ENSCCAG00000021551) #26	MYBPC1 (ENSCCAG00000034345) #27	ENSCCAG00000011395	SPIC (ENSCCAG00000023632) #28	ARL1 (ENSCCAG00000025938) #29	UTP20 (ENSCCAG00000031422) #30	SLC5A8 (ENSCCAG00000019178) #31	ENSCCAG00000000039	ENSCCAG00000018652	ANO4 (ENSCCAG00000034484) #32	GAS2L3 (ENSCCAG00000037369) #34	NR1H4 (ENSCCAG00000021055) #35
Marmoset	MODERN SPECIES	21	TDG (ENSCJAG00000014510) #10	ENSCJAG00000078273 #11	HSP90B1 (ENSCJAG00000014455) #12	ENSCJAG00000082658	NT5DC3 (ENSCJAG00000014428) #13	ENSCJAG00000085954	STAB2 (ENSCJAG00000014363) #14	C12orf42 (ENSCJAG00000014347) #15	ASCL1 (ENSCJAG00000014345) #16	PAH (ENSCJAG00000014328) #17	IGF1 (ENSCJAG00000040664) #18	PMCH (ENSCJAG00000068164) #19	PARPBP (ENSCJAG00000014265) #20	ENSCJAG00000069715	NUP37 (ENSCJAG00000014245) #21	WASHC3 (ENSCJAG00000014225) #22	ENSCJAG00000083752 #23	GNPTAB (ENSCJAG00000001633) #24	ENSCJAG00000001658 #25	CHPT1 (ENSCJAG00000001667) #26	MYBPC1 (ENSCJAG00000001676) #27	ENSCJAG00000072908	ENSCJAG00000078786	SPIC (ENSCJAG00000001906) #28	ENSCJAG00000074317	ENSCJAG00000056099	ARL1 (ENSCJAG00000001966) #29	UTP20 (ENSCJAG00000001913) #30	SLC5A8 (ENSCJAG00000001983) #31	ANO4 (ENSCJAG00000001995) #32	GAS2L3 (ENSCJAG00000002065) #34
Tarsier	DUPLICATION
Tarsier	DUPLICATION
Tarsier	DUPLICATION
Tarsier	MODERN SPECIES	118																ENSTSYG00000025549 #22
Tarsier	MODERN SPECIES	503																ENSTSYG00000034840 #22
Tarsier	MODERN SPECIES	779																ENSTSYG00000030159 #22
Tarsier	MODERN SPECIES	4069													ENSTSYG00000025727 #20	ENSTSYG00000031742	NUP37 (ENSTSYG00000009387) #21	WASHC3 (ENSTSYG00000000587) #22	DRAM1 (ENSTSYG00000002454) #23	GNPTAB (ENSTSYG00000007204) #24	ENSTSYG00000027359	SYCP3 (ENSTSYG00000002324) #25	CHPT1 (ENSTSYG00000002317) #26
Strepsirrhini	ANCESTRAL SPECIES	3	ENSGT00940000160733 #8	ENSGT00940000158078 #9	ENSGT00390000000987 #10	ENSGT00390000007685 #11	ENSGT01020000230401.b.a #12	ENSGT00530000064216	ENSGT00940000158637 #13	ENSGT00940000156566 #14	ENSGT00390000015477 #15	ENSGT00940000162483 #16	ENSGT00950000182885.B #17	ENSGT00940000159081 #18	ENSGT00390000004984 #19	ENSGT00390000006088 #20	ENSGT00390000010777 #21	ENSGT00390000014084 #22	ENSGT01030000234578.B.a #23	ENSGT00390000006747 #24	ENSGT00390000000062.x.a #25	ENSGT00950000183117.a.a #26	ENSGT00940000158254 #27	ENSGT00940000155067.a #28	ENSGT00940000155118 #29	ENSGT00390000016813 #30	ENSGT00940000155166.A #31	ENSGT00940000158600 #32	ENSGT00940000159389 #34	ENSGT00940000158037 #35	ENSGT00940000158187 #36	ENSGT00880000138031 #37	ENSGT00950000182976.a.a
Bushbaby	MODERN SPECIES	122	HCFC2 (ENSOGAG00000002576) #8	GLT8D2 (ENSOGAG00000017017) #9	TDG (ENSOGAG00000017015) #10	UQCC6 (ENSOGAG00000017013) #11	HSP90B1 (ENSOGAG00000017009) #12	ENSOGAG00000017003	NT5DC3 (ENSOGAG00000004414) #13	STAB2 (ENSOGAG00000004407) #14	ENSOGAG00000034668 #15	ASCL1 (ENSOGAG00000030324) #16	PAH (ENSOGAG00000006127) #17	IGF1 (ENSOGAG00000003336) #18	PMCH (ENSOGAG00000003334) #19	PARPBP (ENSOGAG00000003331) #20	NUP37 (ENSOGAG00000003326) #21	WASHC3 (ENSOGAG00000003322) #22	DRAM1 (ENSOGAG00000003318) #23	GNPTAB (ENSOGAG00000012576) #24	SYCP3 (ENSOGAG00000024543) #25	CHPT1 (ENSOGAG00000001207) #26	MYBPC1 (ENSOGAG00000001204) #27	SPIC (ENSOGAG00000015148) #28	ARL1 (ENSOGAG00000015144) #29	UTP20 (ENSOGAG00000015130) #30	ENSOGAG00000026488	SLC5A8 (ENSOGAG00000015120) #31	ANO4 (ENSOGAG00000015111) #32	GAS2L3 (ENSOGAG00000003680) #34	NR1H4 (ENSOGAG00000007874) #35	SLC17A8 (ENSOGAG00000007870) #36	SCYL2 (ENSOGAG00000007862) #37
Lemuriformes	ANCESTRAL SPECIES	1	ENSGT00940000154917 #7	ENSGT00940000160733 #8	ENSGT00940000158078 #9	ENSGT00390000000987 #10	ENSGT00390000007685 #11	ENSGT01020000230401.b.a #12	ENSGT00940000158637 #13	ENSGT00940000156566 #14	ENSGT00390000015477 #15	ENSGT00940000162483 #16	ENSGT00950000182885.B #17	ENSGT00940000159081 #18	ENSGT00390000004984 #19	ENSGT00390000006088 #20	ENSGT00390000010777 #21	ENSGT00390000014084 #22	ENSGT01030000234578.B.a #23	ENSGT00390000006747 #24	ENSGT00390000000062.x.a #25	ENSGT00950000183117.a.a #26	ENSGT00940000158254 #27	ENSGT00940000155067.a #28	ENSGT00940000155118 #29	ENSGT00390000016813 #30	ENSGT00940000155166.A #31	ENSGT00940000158600 #32	ENSGT00940000159389 #34	ENSGT00940000158037 #35	ENSGT00940000158187 #36	ENSGT00880000138031 #37	ENSGT00950000182976.a.a
Lemuriformes_a	ANCESTRAL SPECIES	47	ENSGT00940000154917 #7	ENSGT00940000160733 #8	ENSGT00940000158078 #9	ENSGT00390000000987 #10	ENSGT00390000007685 #11	ENSGT01020000230401.b.a #12	ENSGT00940000158637 #13	ENSGT00940000156566 #14	ENSGT00390000015477 #15	ENSGT00940000162483 #16	ENSGT00950000182885.B #17	ENSGT00940000159081 #18	ENSGT00390000004984 #19	ENSGT00390000006088 #20	ENSGT00390000010777 #21	ENSGT00390000014084 #22	ENSGT01030000234578.B.a #23	ENSGT00390000006747 #24	ENSGT00390000000062.x.a #25	ENSGT00950000183117.a.a #26	ENSGT00940000158254 #27	ENSGT00940000155067.a #28	ENSGT00940000155118 #29	ENSGT00390000016813 #30	ENSGT00940000155166.A #31	ENSGT00940000158600 #32	ENSGT00940000159389 #34	ENSGT00940000158037 #35	ENSGT00940000158187 #36	ENSGT00880000138031 #37	ENSGT00950000182976.a.a
Coquerels sifaka	MODERN SPECIES	449	HCFC2 (ENSPCOG00000020246) #8	GLT8D2 (ENSPCOG00000021522) #9	TDG (ENSPCOG00000021810) #10	UQCC6 (ENSPCOG00000016206) #11	HSP90B1 (ENSPCOG00000025207) #12	ENSPCOG00000006947	NT5DC3 (ENSPCOG00000024255) #13	STAB2 (ENSPCOG00000019956) #14	C12orf42 (ENSPCOG00000001730) #15	ASCL1 (ENSPCOG00000026760) #16	PAH (ENSPCOG00000023035) #17	IGF1 (ENSPCOG00000021533) #18	PMCH (ENSPCOG00000023886) #19	PARPBP (ENSPCOG00000012446) #20	NUP37 (ENSPCOG00000014651) #21	WASHC3 (ENSPCOG00000008139) #22	DRAM1 (ENSPCOG00000010378) #23	GNPTAB (ENSPCOG00000028782) #24	SYCP3 (ENSPCOG00000023007) #25	CHPT1 (ENSPCOG00000017637) #26	MYBPC1 (ENSPCOG00000006158) #27	SPIC (ENSPCOG00000009062) #28	ENSPCOG00000010462 #29	UTP20 (ENSPCOG00000024948) #30
Greater bamboo lemur	MODERN SPECIES	735	NFYB (ENSPSMG00000011842) #7	HCFC2 (ENSPSMG00000011867) #8	GLT8D2 (ENSPSMG00000011893) #9	TDG (ENSPSMG00000011974) #10	UQCC6 (ENSPSMG00000012018) #11	HSP90B1 (ENSPSMG00000012140) #12	NT5DC3 (ENSPSMG00000012329) #13	STAB2 (ENSPSMG00000012350) #14	ENSPSMG00000012371 #15	ASCL1 (ENSPSMG00000012377) #16	PAH (ENSPSMG00000012431) #17	IGF1 (ENSPSMG00000012493) #18	PMCH (ENSPSMG00000012512) #19	PARPBP (ENSPSMG00000012564) #20	NUP37 (ENSPSMG00000012590) #21	WASHC3 (ENSPSMG00000012602) #22	DRAM1 (ENSPSMG00000012608) #23	GNPTAB (ENSPSMG00000012631) #24	SYCP3 (ENSPSMG00000012646) #25	CHPT1 (ENSPSMG00000012658) #26	MYBPC1 (ENSPSMG00000013038) #27	SPIC (ENSPSMG00000013707) #28	ARL1 (ENSPSMG00000013774) #29	UTP20 (ENSPSMG00000013883) #30	SLC5A8 (ENSPSMG00000013925) #31	ANO4 (ENSPSMG00000014062) #32	GAS2L3 (ENSPSMG00000014137) #34	NR1H4 (ENSPSMG00000014187) #35	SLC17A8 (ENSPSMG00000014214) #36	SCYL2 (ENSPSMG00000014364) #37	DEPDC4 (ENSPSMG00000014424)
Mouse lemur	MODERN SPECIES	29	HCFC2 (ENSMICG00000002039) #8	GLT8D2 (ENSMICG00000002035) #9	TDG (ENSMICG00000002033) #10	UQCC6 (ENSMICG00000032809) #11	HSP90B1 (ENSMICG00000002024) #12	NT5DC3 (ENSMICG00000002008) #13	STAB2 (ENSMICG00000001977) #14	C12orf42 (ENSMICG00000001972) #15	ASCL1 (ENSMICG00000001967) #16	PAH (ENSMICG00000001962) #17	IGF1 (ENSMICG00000001960) #18	ENSMICG00000035436	PARPBP (ENSMICG00000035939) #20	PMCH (ENSMICG00000007740) #19	NUP37 (ENSMICG00000002615) #21	WASHC3 (ENSMICG00000002612) #22	DRAM1 (ENSMICG00000012068) #23	GNPTAB (ENSMICG00000012048) #24	SYCP3 (ENSMICG00000046057) #25	CHPT1 (ENSMICG00000012038) #26	MYBPC1 (ENSMICG00000012018) #27	SPIC (ENSMICG00000044168) #28	ARL1 (ENSMICG00000015801) #29	UTP20 (ENSMICG00000015736) #30	SLC5A8 (ENSMICG00000029503) #31	ENSMICG00000047865 #32	ENSMICG00000030149	GAS2L3 (ENSMICG00000042318) #34	NR1H4 (ENSMICG00000013522) #35	SLC17A8 (ENSMICG00000001586) #36	ENSMICG00000016414 #37
Euarchontoglires_A	ANCESTRAL SPECIES	5	ENSGT00940000160733 #8	ENSGT00940000158078 #9	ENSGT00390000000987 #10	ENSGT00390000007685 #11	ENSGT01020000230401.b.a #12	ENSGT00530000064216	ENSGT00940000158637 #13	ENSGT00940000156566 #14	ENSGT00390000015477 #15	ENSGT00940000162483 #16	ENSGT00950000182885.B #17	ENSGT00940000159081 #18	ENSGT00390000004984 #19	ENSGT00390000006088 #20	ENSGT00390000010777 #21	ENSGT00390000014084 #22	ENSGT01030000234578.B.a #23	ENSGT00390000006747 #24	ENSGT00390000000062.x.a #25	ENSGT00950000183117.a.a #26	ENSGT00940000158254 #27	ENSGT00940000155067.a #28	ENSGT00940000155118 #29	ENSGT00900000143486	ENSGT00390000016813 #30	ENSGT00940000155166.A #31	ENSGT00940000158600 #32	ENSGT00940000159389 #34	ENSGT00940000158037 #35	ENSGT00940000158187 #36	ENSGT00880000138031 #37
Tree shrew	MODERN SPECIES	903																WASHC3 (ENSTBEG00000008498) #22
Glires	ANCESTRAL SPECIES	4	ENSGT00940000160733 #8	ENSGT00940000158078 #9	ENSGT00390000000987 #10	ENSGT00390000007685 #11	ENSGT01020000230401.b.a #12	ENSGT00530000064216	ENSGT00940000158637 #13	ENSGT00940000156566 #14	ENSGT00390000015477 #15	ENSGT00940000162483 #16	ENSGT00950000182885.B #17	ENSGT00940000159081 #18	ENSGT00390000004984 #19	ENSGT00390000006088 #20	ENSGT00390000010777 #21	ENSGT00390000014084 #22	ENSGT01030000234578.B.a #23	ENSGT00390000006747 #24	ENSGT00390000000062.x.a #25	ENSGT00950000183117.a.a #26	ENSGT00940000158254 #27	ENSGT00940000155067.a #28	ENSGT00940000155118 #29	ENSGT00900000143486	ENSGT00390000016813 #30	ENSGT00940000155166.A #31	ENSGT00940000158600 #32	ENSGT00940000159389 #34	ENSGT00940000158037 #35	ENSGT00940000158187 #36	ENSGT00880000138031 #37
Rodentia	ANCESTRAL SPECIES	5	ENSGT00940000160733 #8	ENSGT00940000158078 #9	ENSGT00390000000987 #10	ENSGT00390000007685 #11	ENSGT01020000230401.b.a #12	ENSGT00530000064216	ENSGT00940000158637 #13	ENSGT00940000156566 #14	ENSGT00390000015477 #15	ENSGT00940000162483 #16	ENSGT00950000182885.B #17	ENSGT00940000159081 #18	ENSGT00390000004984 #19	ENSGT00390000006088 #20	ENSGT00390000010777 #21	ENSGT00390000014084 #22	ENSGT01030000234578.B.a #23	ENSGT00390000006747 #24	ENSGT00390000000062.x.a #25	ENSGT00950000183117.a.a #26	ENSGT00940000158254 #27	ENSGT00940000155067.a #28	ENSGT00940000155118 #29	ENSGT00390000016813 #30	ENSGT00940000155166.A #31	ENSGT00940000158600 #32	ENSGT00940000159389 #34	ENSGT00940000158037 #35	ENSGT00940000158187 #36	ENSGT00880000138031 #37	ENSGT00720000108833
Rodentia_B	ANCESTRAL SPECIES	3	ENSGT00940000158078 #9	ENSGT00390000000987 #10	ENSGT00390000007685 #11	ENSGT01020000230401.b.a #12	ENSGT00530000064216	ENSGT00940000158637 #13	ENSGT00940000156566 #14	ENSGT00390000015477 #15	ENSGT00940000162483 #16	ENSGT00950000182885.B #17	ENSGT00900000143266	ENSGT00940000159081 #18	ENSGT00390000004984 #19	ENSGT00390000006088 #20	ENSGT00390000010777 #21	ENSGT00390000014084 #22	ENSGT01030000234578.B.a #23	ENSGT00390000006747 #24	ENSGT00390000000062.x.a #25	ENSGT00950000183117.a.a #26	ENSGT00940000158254 #27	ENSGT00940000155067.a #28	ENSGT00940000155118 #29	ENSGT00390000016813 #30	ENSGT00940000155166.A #31	ENSGT00940000158600 #32	ENSGT00940000159389 #34	ENSGT00940000158037 #35	ENSGT00940000158187 #36	ENSGT00880000138031 #37	ENSGT00720000108833
Myomorpha	ANCESTRAL SPECIES	2	ENSGT00940000158078 #9	ENSGT00390000000987 #10	ENSGT00390000007685 #11	ENSGT01020000230401.b.a #12	ENSGT00530000064216	ENSGT00940000158637 #13	ENSGT00940000156566 #14	ENSGT00390000015477 #15	ENSGT00940000162483 #16	ENSGT00950000182885.B #17	ENSGT00900000143266	ENSGT00940000159081 #18	ENSGT00390000004984 #19	ENSGT00390000006088 #20	ENSGT00390000010777 #21	ENSGT00390000014084 #22	ENSGT01030000234578.B.a #23	ENSGT00390000006747 #24	ENSGT00390000000062.x.a.b #25	ENSGT00950000183117.a.a #26	ENSGT00940000158254 #27	ENSGT00940000155067.a #28	ENSGT00940000155118 #29	ENSGT00390000016813 #30	ENSGT00940000155166.A #31	ENSGT00940000158600 #32	ENSGT00940000159389 #34	ENSGT00940000158037 #35	ENSGT00940000158187 #36	ENSGT00880000138031 #37	ENSGT00720000108833
Muroidea	ANCESTRAL SPECIES	5	ENSGT00940000158078 #9	ENSGT00390000000987 #10	ENSGT00390000007685 #11	ENSGT01020000230401.b.a #12	ENSGT00530000064216	ENSGT00940000158637 #13	ENSGT00940000156566 #14	ENSGT00390000015477 #15	ENSGT00940000162483 #16	ENSGT00950000182885.B #17	ENSGT00900000143266	ENSGT00940000159081 #18	ENSGT00390000004984 #19	ENSGT00390000006088 #20	ENSGT00390000010777 #21	ENSGT00390000014084 #22	ENSGT01030000234578.B.a #23	ENSGT00390000006747 #24	ENSGT00390000000062.x.a.b #25	ENSGT00950000183117.a.a #26	ENSGT00940000158254 #27	ENSGT00940000155067.a #28	ENSGT00940000155118 #29	ENSGT00390000016813 #30	ENSGT00940000155166.A #31	ENSGT00940000158600 #32	ENSGT00940000159389 #34	ENSGT00940000158037 #35	ENSGT00940000158187 #36	ENSGT00880000138031 #37	ENSGT00720000108833
Muroidea_A	ANCESTRAL SPECIES	22	ENSGT00940000158078 #9	ENSGT00390000000987 #10	ENSGT00390000007685 #11	ENSGT01020000230401.b.a #12	ENSGT00530000064216	ENSGT00940000158637 #13	ENSGT00940000156566 #14	ENSGT00390000015477 #15	ENSGT00940000162483 #16	ENSGT00950000182885.B #17	ENSGT00900000143266	ENSGT00940000159081 #18	ENSGT00390000004984 #19	ENSGT00390000006088 #20	ENSGT00390000010777 #21	ENSGT00390000014084 #22	ENSGT01030000234578.B.a #23	ENSGT00390000006747 #24	ENSGT00390000000062.x.a.b #25	ENSGT00950000183117.a.a #26	ENSGT00940000158254 #27	ENSGT00940000155067.a #28	ENSGT00390000018318.u.b.a.b.a.a.b	ENSGT00940000155118 #29	ENSGT00390000016813 #30	ENSGT00940000155166.A #31	ENSGT00940000158600 #32	ENSGT00940000159389 #34	ENSGT00940000158037 #35	ENSGT00940000158187 #36	ENSGT00880000138031 #37
Cricetidae	ANCESTRAL SPECIES	21	ENSGT00940000158078 #9	ENSGT00390000000987 #10	ENSGT00390000007685 #11	ENSGT01020000230401.b.a #12	ENSGT00530000064216	ENSGT00940000158637 #13	ENSGT00940000156566 #14	ENSGT00390000015477 #15	ENSGT00940000162483 #16	ENSGT00950000182885.B #17	ENSGT00900000143266	ENSGT00940000159081 #18	ENSGT00390000004984 #19	ENSGT00390000006088 #20	ENSGT00390000010777 #21	ENSGT00390000014084 #22	ENSGT01030000234578.B.a #23	ENSGT00390000006747 #24	ENSGT00390000000062.x.a.b #25	ENSGT00950000183117.a.a #26	ENSGT00940000158254 #27	ENSGT00940000155067.a #28	ENSGT00390000018318.u.b.a.b.a.a.b	ENSGT00940000155118 #29	ENSGT00390000016813 #30	ENSGT00940000155166.A #31	ENSGT00940000158600 #32	ENSGT00940000159389 #34	ENSGT00940000158037 #35	ENSGT00940000158187 #36	ENSGT00880000138031 #37
Cricetinae	ANCESTRAL SPECIES	22	ENSGT00940000160733 #8	ENSGT00940000158078 #9	ENSGT00390000000987.e #10	ENSGT00390000007685 #11	ENSGT01020000230401.b.a #12	ENSGT00530000064216	ENSGT00940000158637 #13	ENSGT00940000156566 #14	ENSGT00390000015477 #15	ENSGT00940000162483 #16	ENSGT00950000182885.B #17	ENSGT00940000159081 #18	ENSGT00390000004984 #19	ENSGT00390000006088 #20	ENSGT00390000010777 #21	ENSGT00390000014084 #22	ENSGT01030000234578.B.a #23	ENSGT00390000006747 #24	ENSGT00390000000062.x.a.b #25	ENSGT00950000183117.a.a #26	ENSGT00940000158254 #27	ENSGT00940000155067.a #28	ENSGT00390000018318.u.b.a.b.a.a.b	ENSGT00940000155118 #29	ENSGT00390000016813 #30	ENSGT00940000155166.A #31	ENSGT00940000158600 #32	ENSGT00940000159389 #34	ENSGT00940000158037 #35	ENSGT00940000158187 #36	ENSGT00880000138031 #37
Chinese hamster chok1gshd	MODERN SPECIES	83	Glt8d2 (ENSCGRG00001011058) #9	ENSCGRG00001005837 #10	ENSCGRG00001021751 #11	Hsp90b1 (ENSCGRG00001023543) #12	Ttc41 (ENSCGRG00001013895)	Nt5dc3 (ENSCGRG00001017505) #13	Stab2 (ENSCGRG00001023839) #14	1700113H08Rik (ENSCGRG00001016986) #15	Ascl1 (ENSCGRG00001020607) #16	Pah (ENSCGRG00001019844) #17	Igf1 (ENSCGRG00001024335) #18	ENSCGRG00001009416	Parpbp (ENSCGRG00001016323) #20	Pmch (ENSCGRG00001016652) #19	Nup37 (ENSCGRG00001017394) #21	Washc3 (ENSCGRG00001018411) #22	Dram1 (ENSCGRG00001017541) #23	Gnptab (ENSCGRG00001022192) #24	Sycp3 (ENSCGRG00001006406) #25	Chpt1 (ENSCGRG00001011169) #26	Mybpc1 (ENSCGRG00001023486) #27	Spic (ENSCGRG00001005919) #28	ENSCGRG00001008037	Arl1 (ENSCGRG00001010446) #29	Utp20 (ENSCGRG00001017151) #30	Slc5a8 (ENSCGRG00001014482) #31	Ano4 (ENSCGRG00001022718) #32	Gas2l3 (ENSCGRG00001015751) #34	Nr1h4 (ENSCGRG00001017990) #35	Slc17a8 (ENSCGRG00001021681) #36	ENSCGRG00001005091 #37
Golden Hamster	MODERN SPECIES	628	ENSMAUG00000012886 #10	ENSMAUG00000000988 #11	Hsp90b1 (ENSMAUG00000019521) #12	Ttc41 (ENSMAUG00000011319)	Nt5dc3 (ENSMAUG00000007322) #13	Stab2 (ENSMAUG00000015034) #14	1700113H08Rik (ENSMAUG00000020449) #15	Ascl1 (ENSMAUG00000020431) #16	ENSMAUG00000013802	Pah (ENSMAUG00000018432) #17	ENSMAUG00000014392	Igf1 (ENSMAUG00000020849) #18	Pmch (ENSMAUG00000014017) #19	Parpbp (ENSMAUG00000006327) #20	Nup37 (ENSMAUG00000011627) #21	Washc3 (ENSMAUG00000011959) #22	Dram1 (ENSMAUG00000022048) #23	Gnptab (ENSMAUG00000017361) #24	Sycp3 (ENSMAUG00000012167) #25	Chpt1 (ENSMAUG00000012720) #26	Mybpc1 (ENSMAUG00000008414) #27	ENSMAUG00000008388	Arl1 (ENSMAUG00000021923) #29	Utp20 (ENSMAUG00000011898) #30	Slc5a8 (ENSMAUG00000020619) #31	Ano4 (ENSMAUG00000021383) #32	Gas2l3 (ENSMAUG00000015984) #34	Nr1h4 (ENSMAUG00000011325) #35	Slc17a8 (ENSMAUG00000007901) #36	Scyl2 (ENSMAUG00000013849) #37	ENSMAUG00000010233
Cricetidae_B	ANCESTRAL SPECIES	29	ENSGT00940000158078 #9	ENSGT00390000000987 #10	ENSGT00390000007685 #11	ENSGT01020000230401.b.a #12	ENSGT00530000064216	ENSGT00940000158637 #13	ENSGT00940000156566 #14	ENSGT00390000015477 #15	ENSGT00940000162483 #16	ENSGT00950000182885.B #17	ENSGT00900000143266	ENSGT00940000159081 #18	ENSGT00390000004984 #19	ENSGT00390000006088 #20	ENSGT00390000010777 #21	ENSGT00390000014084 #22	ENSGT01030000234578.B.a #23	ENSGT00390000006747 #24	ENSGT00390000000062.x.a.b #25	ENSGT00950000183117.a.a #26	ENSGT00940000158254 #27	ENSGT00940000155067.a #28	ENSGT00390000018318.u.b.a.b.a.a.b	ENSGT00940000155118 #29	ENSGT00390000016813 #30	ENSGT00940000155166.A #31	ENSGT00940000158600 #32	ENSGT00940000159389 #34	ENSGT00940000158037 #35	ENSGT00940000158187 #36	ENSGT00880000138031 #37
Northern American deer mouse	MODERN SPECIES	9	Glt8d2 (ENSPEMG00000022887) #9	ENSPEMG00000018746 #10	ENSPEMG00000026334 #11	Hsp90b1 (ENSPEMG00000022761) #12	ENSPEMG00000001891	ENSPEMG00000022680 #13	Stab2 (ENSPEMG00000020820) #14	ENSPEMG00000026704	1700113H08Rik (ENSPEMG00000020964) #15	Ascl1 (ENSPEMG00000021891) #16	Pah (ENSPEMG00000020713) #17	Igf1 (ENSPEMG00000020617) #18	Pmch (ENSPEMG00000025564) #19	Parpbp (ENSPEMG00000020605) #20	Nup37 (ENSPEMG00000022470) #21	Washc3 (ENSPEMG00000022296) #22	Dram1 (ENSPEMG00000021639) #23	Gnptab (ENSPEMG00000020834) #24	Sycp3 (ENSPEMG00000021453) #25	ENSPEMG00000012990 #26	Mybpc1 (ENSPEMG00000021020) #27	Spic (ENSPEMG00000020720) #28	Arl1 (ENSPEMG00000008781) #29	Utp20 (ENSPEMG00000024120) #30	Slc5a8 (ENSPEMG00000020559) #31	Ano4 (ENSPEMG00000009170) #32	Gas2l3 (ENSPEMG00000023391) #34	Nr1h4 (ENSPEMG00000021973) #35	Slc17a8 (ENSPEMG00000013525) #36	ENSPEMG00000025459	Scyl2 (ENSPEMG00000015522) #37
Prairie vole	MODERN SPECIES	10	Glt8d2 (ENSMOCG00000018691) #9	Tdg (ENSMOCG00000010304) #10	ENSMOCG00000014043 #11	Hsp90b1 (ENSMOCG00000006898) #12	Ttc41 (ENSMOCG00000012760)	Nt5dc3 (ENSMOCG00000003821) #13	Stab2 (ENSMOCG00000010615) #14	1700113H08Rik (ENSMOCG00000014753) #15	Ascl1 (ENSMOCG00000014507) #16	ENSMOCG00000005982 #17	ENSMOCG00000020953	Igf1 (ENSMOCG00000017765) #18	Pmch (ENSMOCG00000012390) #19	Parpbp (ENSMOCG00000005485) #20	Nup37 (ENSMOCG00000019382) #21	Washc3 (ENSMOCG00000018398) #22	Dram1 (ENSMOCG00000021435) #23	ENSMOCG00000016954 #24	Sycp3 (ENSMOCG00000018486) #25	Chpt1 (ENSMOCG00000014213) #26	Mybpc1 (ENSMOCG00000022013) #27	Spic (ENSMOCG00000015321) #28	ENSMOCG00000009467	Arl1 (ENSMOCG00000005852) #29	Utp20 (ENSMOCG00000015242) #30	Slc5a8 (ENSMOCG00000012457) #31	Ano4 (ENSMOCG00000015645) #32	Gas2l3 (ENSMOCG00000010014) #34	Nr1h4 (ENSMOCG00000006519) #35	Slc17a8 (ENSMOCG00000009428) #36	ENSMOCG00000016884 #37
Murinae	ANCESTRAL SPECIES	22	ENSGT00940000160733 #8	ENSGT00940000158078 #9	ENSGT00390000000987 #10	ENSGT00390000007685 #11	ENSGT01020000230401.b.a #12	ENSGT00530000064216	ENSGT00940000158637 #13	ENSGT00940000156566 #14	ENSGT00390000015477 #15	ENSGT00940000162483 #16	ENSGT00950000182885.B #17	ENSGT00940000159081 #18	ENSGT00390000004984 #19	ENSGT00390000006088 #20	ENSGT00390000010777 #21	ENSGT00390000014084 #22	ENSGT01030000234578.B.a #23	ENSGT00390000006747 #24	ENSGT00390000000062.x.a.b #25	ENSGT00950000183117.a.a #26	ENSGT00940000158254 #27	ENSGT00940000155067.a #28	ENSGT00390000018318.u.b.a.b.a.a.b	ENSGT00940000155118 #29	ENSGT00390000016813 #30	ENSGT00940000155166.A #31	ENSGT00940000158600 #32	ENSGT00940000159389 #34	ENSGT00940000158037 #35	ENSGT00940000158187 #36	ENSGT00880000138031 #37
Mus	ANCESTRAL SPECIES	23	ENSGT01100000263545.a.b.c.a	ENSGT00390000006670	ENSGT00940000155415	ENSGT00940000159601	ENSGT01020000230401.b.a #12	ENSGT00530000064216	ENSGT00940000158637 #13	ENSGT00940000156566 #14	ENSGT00390000015477 #15	ENSGT00940000162483 #16	ENSGT00950000182885.B #17	ENSGT00940000159081 #18	ENSGT00390000004984 #19	ENSGT00390000006088 #20	ENSGT00390000010777 #21	ENSGT00390000014084 #22	ENSGT01030000234578.B.a #23	ENSGT00390000006747 #24	ENSGT00390000000062.x.a.b #25	ENSGT00950000183117.a.a #26	ENSGT00940000158254 #27	ENSGT00940000155067.a #28	ENSGT00940000155118 #29	ENSGT00390000016813 #30	ENSGT00940000155166.A #31	ENSGT00940000158600 #32	ENSGT00940000159389 #34	ENSGT00940000158037 #35	ENSGT00940000158187 #36	ENSGT00880000138031 #37	ENSGT00720000108833
Mus_A	ANCESTRAL SPECIES	11	ENSGT01100000263545.a.b.c.a	ENSGT00390000006670	ENSGT00940000155415	ENSGT00940000159601	ENSGT01020000230401.b.a #12	ENSGT00530000064216	ENSGT00940000158637 #13	ENSGT00940000156566 #14	ENSGT00390000015477 #15	ENSGT00940000162483 #16	ENSGT00950000182885.B #17	ENSGT00940000159081 #18	ENSGT00390000004984 #19	ENSGT00390000006088 #20	ENSGT00390000010777 #21	ENSGT00390000014084 #22	ENSGT01030000234578.B.a #23	ENSGT00390000006747 #24	ENSGT00390000000062.x.a.b #25	ENSGT00950000183117.a.a #26	ENSGT00940000158254 #27	ENSGT00940000155067.a #28	ENSGT00940000155118 #29	ENSGT00390000016813 #30	ENSGT00940000155166.A #31	ENSGT00940000158600 #32	ENSGT00940000159389 #34	ENSGT00940000158037 #35	ENSGT00940000158187 #36	ENSGT00880000138031 #37	ENSGT00720000108833
Mus_B	ANCESTRAL SPECIES	10	ENSGT01100000263545.a.b.c.a	ENSGT00390000006670	ENSGT00940000155415	ENSGT00940000159601	ENSGT01020000230401.b.a #12	ENSGT00530000064216	ENSGT00940000158637 #13	ENSGT00940000156566 #14	ENSGT00390000015477 #15	ENSGT00940000162483 #16	ENSGT00950000182885.B #17	ENSGT00940000159081 #18	ENSGT00390000004984 #19	ENSGT00390000006088 #20	ENSGT00390000010777 #21	ENSGT00390000014084 #22	ENSGT01030000234578.B.a #23	ENSGT00390000006747 #24	ENSGT00390000000062.x.a.b #25	ENSGT00950000183117.a.a #26	ENSGT00940000158254 #27	ENSGT00940000155067.a #28	ENSGT00940000155118 #29	ENSGT00390000016813 #30	ENSGT00940000155166.A #31	ENSGT00940000158600 #32	ENSGT00940000159389 #34	ENSGT00940000158037 #35	ENSGT00940000158187 #36	ENSGT00880000138031 #37	ENSGT00720000108833
Mouse	MODERN SPECIES	1	Fbxo7 (ENSMUSG00000001786)	Syn3 (ENSMUSG00000059602)	Timp3 (ENSMUSG00000020044)	Hsp90b1 (ENSMUSG00000020048) #12	Ttc41 (ENSMUSG00000044937)	Gm49358 (ENSMUSG00000112743)	Nt5dc3 (ENSMUSG00000054027) #13	Stab2 (ENSMUSG00000035459) #14	1700113H08Rik (ENSMUSG00000047129) #15	Ascl1 (ENSMUSG00000020052) #16	Pah (ENSMUSG00000020051) #17	Igf1 (ENSMUSG00000020053) #18	Pmch (ENSMUSG00000035383) #19	Parpbp (ENSMUSG00000035365) #20	Nup37 (ENSMUSG00000035351) #21	Washc3 (ENSMUSG00000020056) #22	Dram1 (ENSMUSG00000020057) #23	Gnptab (ENSMUSG00000035311) #24	Chpt1 (ENSMUSG00000060002) #26	Sycp3 (ENSMUSG00000020059) #25	Mybpc1 (ENSMUSG00000020061) #27	Spic (ENSMUSG00000004359) #28	Arl1 (ENSMUSG00000060904) #29	Utp20 (ENSMUSG00000004356) #30	Slc5a8 (ENSMUSG00000020062) #31	Ano4 (ENSMUSG00000035189) #32	Gas2l3 (ENSMUSG00000074802) #34	Nr1h4 (ENSMUSG00000047638) #35	Slc17a8 (ENSMUSG00000019935) #36	Scyl2 (ENSMUSG00000069539) #37	Actr6 (ENSMUSG00000019948)
Mus_C	ANCESTRAL SPECIES	7	ENSGT01100000263545.a.b.c.a	ENSGT00390000006670	ENSGT00940000155415	ENSGT00940000159601	ENSGT01020000230401.b.a #12	ENSGT00530000064216	ENSGT00940000158637 #13	ENSGT00940000156566 #14	ENSGT00390000015477 #15	ENSGT00940000162483 #16	ENSGT00950000182885.B #17	ENSGT00940000159081 #18	ENSGT00390000004984 #19	ENSGT00390000006088 #20	ENSGT00390000010777 #21	ENSGT00390000014084 #22	ENSGT01030000234578.B.a #23	ENSGT00390000006747 #24	ENSGT00390000000062.x.a.b #25	ENSGT00950000183117.a.a #26	ENSGT00940000158254 #27	ENSGT00940000155067.a #28	ENSGT00940000155118 #29	ENSGT00390000016813 #30	ENSGT00940000155166.A #31	ENSGT00940000158600 #32	ENSGT00940000159389 #34	ENSGT00940000158037 #35	ENSGT00940000158187 #36	ENSGT00880000138031 #37	ENSGT00720000108833
Steppe mouse	MODERN SPECIES	2967		ENSMSIG00000031101 #12	Ttc41 (ENSMSIG00000031255)	Nt5dc3 (ENSMSIG00000031256) #13	Stab2 (ENSMSIG00000031257) #14	ENSMSIG00000031258	1700113H08Rik (ENSMSIG00000031260) #15	ENSMSIG00000031263	Ascl1 (ENSMSIG00000031264) #16	Pah (ENSMSIG00000031265) #17	Igf1 (ENSMSIG00000031268) #18	ENSMSIG00000031270	Pmch (ENSMSIG00000031271) #19	Parpbp (ENSMSIG00000031272) #20	Nup37 (ENSMSIG00000031273) #21	Washc3 (ENSMSIG00000031276) #22	ENSMSIG00000031278	ENSMSIG00000031279	Dram1 (ENSMSIG00000031281) #23	Gnptab (ENSMSIG00000031286) #24	Sycp3 (ENSMSIG00000031293) #25	ENSMSIG00000031295 #26
spretus	MODERN SPECIES	1	Bpifc (MGP_SPRETEiJ_G0016508)	Fbxo7 (MGP_SPRETEiJ_G0016509)	Syn3 (MGP_SPRETEiJ_G0016510)	Timp3 (MGP_SPRETEiJ_G0016511)	Hsp90b1 (MGP_SPRETEiJ_G0016512) #12	Ttc41 (MGP_SPRETEiJ_G0016513)	Nt5dc3 (MGP_SPRETEiJ_G0016514) #13	Stab2 (MGP_SPRETEiJ_G0016515) #14	1700113H08Rik (MGP_SPRETEiJ_G0016516) #15	Ascl1 (MGP_SPRETEiJ_G0016517) #16	Pah (MGP_SPRETEiJ_G0016518) #17	Igf1 (MGP_SPRETEiJ_G0016519) #18	Parpbp (MGP_SPRETEiJ_G0016520) #20	Pmch (MGP_SPRETEiJ_G0016521) #19	Nup37 (MGP_SPRETEiJ_G0016522) #21	Washc3 (MGP_SPRETEiJ_G0016523) #22	Dram1 (MGP_SPRETEiJ_G0016524) #23	Gnptab (MGP_SPRETEiJ_G0016525) #24	Sycp3 (MGP_SPRETEiJ_G0016526) #25	MGP_SPRETEiJ_G0016527 #26	Mybpc1 (MGP_SPRETEiJ_G0016528) #27	Spic (MGP_SPRETEiJ_G0016529) #28	Arl1 (MGP_SPRETEiJ_G0016530) #29	Utp20 (MGP_SPRETEiJ_G0016531) #30	Slc5a8 (MGP_SPRETEiJ_G0016532) #31	Ano4 (MGP_SPRETEiJ_G0016533) #32	Gas2l3 (MGP_SPRETEiJ_G0016534) #34	Nr1h4 (MGP_SPRETEiJ_G0016535) #35	Slc17a8 (MGP_SPRETEiJ_G0016536) #36	Scyl2 (MGP_SPRETEiJ_G0016537) #37	Actr6 (MGP_SPRETEiJ_G0016538)
Ryukyu mouse	MODERN SPECIES	1	Bpifc (MGP_CAROLIEiJ_G0015690)	Fbxo7 (MGP_CAROLIEiJ_G0015691)	Syn3 (MGP_CAROLIEiJ_G0015692)	Timp3 (MGP_CAROLIEiJ_G0015693)	Hsp90b1 (MGP_CAROLIEiJ_G0015694) #12	Ttc41 (MGP_CAROLIEiJ_G0015695)	Nt5dc3 (MGP_CAROLIEiJ_G0015696) #13	Stab2 (MGP_CAROLIEiJ_G0015697) #14	1700113H08Rik (MGP_CAROLIEiJ_G0015698) #15	Ascl1 (MGP_CAROLIEiJ_G0015699) #16	Pah (MGP_CAROLIEiJ_G0015700) #17	Igf1 (MGP_CAROLIEiJ_G0015701) #18	Pmch (MGP_CAROLIEiJ_G0015702) #19	Parpbp (MGP_CAROLIEiJ_G0015703) #20	Nup37 (MGP_CAROLIEiJ_G0015704) #21	Washc3 (MGP_CAROLIEiJ_G0015705) #22	Dram1 (MGP_CAROLIEiJ_G0015706) #23	Gnptab (MGP_CAROLIEiJ_G0015707) #24	Chpt1 (MGP_CAROLIEiJ_G0015708) #26	Sycp3 (MGP_CAROLIEiJ_G0015709) #25	Mybpc1 (MGP_CAROLIEiJ_G0015710) #27	MGP_CAROLIEiJ_G0015711 #28	Arl1 (MGP_CAROLIEiJ_G0015712) #29	Utp20 (MGP_CAROLIEiJ_G0015713) #30	Slc5a8 (MGP_CAROLIEiJ_G0015714) #31	Ano4 (MGP_CAROLIEiJ_G0015715) #32	Gas2l3 (MGP_CAROLIEiJ_G0015716) #34	Nr1h4 (MGP_CAROLIEiJ_G0015717) #35	Slc17a8 (MGP_CAROLIEiJ_G0015718) #36	Scyl2 (MGP_CAROLIEiJ_G0015719) #37	Actr6 (MGP_CAROLIEiJ_G0015720)
Shrew mouse	MODERN SPECIES	22	Bpifc (MGP_PahariEiJ_G0031395)	Fbxo7 (MGP_PahariEiJ_G0031394)	Timp3 (MGP_PahariEiJ_G0031393)	Syn3 (MGP_PahariEiJ_G0031392)	Hsp90b1 (MGP_PahariEiJ_G0031391) #12	Ttc41 (MGP_PahariEiJ_G0031390)	Nt5dc3 (MGP_PahariEiJ_G0031389) #13	Stab2 (MGP_PahariEiJ_G0031388) #14	1700113H08Rik (MGP_PahariEiJ_G0031387) #15	Ascl1 (MGP_PahariEiJ_G0031386) #16	Pah (MGP_PahariEiJ_G0031385) #17	Igf1 (MGP_PahariEiJ_G0031384) #18	Pmch (MGP_PahariEiJ_G0031383) #19	Parpbp (MGP_PahariEiJ_G0031382) #20	Nup37 (MGP_PahariEiJ_G0031381) #21	Washc3 (MGP_PahariEiJ_G0031380) #22	Dram1 (MGP_PahariEiJ_G0031379) #23	Gnptab (MGP_PahariEiJ_G0031378) #24	Sycp3 (MGP_PahariEiJ_G0031377) #25	MGP_PahariEiJ_G0031376 #26	Mybpc1 (MGP_PahariEiJ_G0031375) #27	Spic (MGP_PahariEiJ_G0031374) #28	Arl1 (MGP_PahariEiJ_G0031373) #29	Utp20 (MGP_PahariEiJ_G0031372) #30	Slc5a8 (MGP_PahariEiJ_G0031371) #31	Ano4 (MGP_PahariEiJ_G0031370) #32	Gas2l3 (MGP_PahariEiJ_G0031369) #34	Nr1h4 (MGP_PahariEiJ_G0031368) #35	Slc17a8 (MGP_PahariEiJ_G0031367) #36	Scyl2 (MGP_PahariEiJ_G0031366) #37	Actr6 (MGP_PahariEiJ_G0031365)
Rat	MODERN SPECIES	17	Glt8d2 (ENSRNOG00000033579) #9	Tdg (ENSRNOG00000027124) #10	Uqcc6 (ENSRNOG00000026982) #11	Hsp90b1 (ENSRNOG00000026963) #12	Ttc41 (ENSRNOG00000026807)	Nt5dc3 (ENSRNOG00000026793) #13	Stab2 (ENSRNOG00000038948) #14	LOC102550284 (ENSRNOG00000053843)	RGD1560034 (ENSRNOG00000038943) #15	Ascl1 (ENSRNOG00000004294) #16	Pah (ENSRNOG00000004302) #17	Igf1 (ENSRNOG00000004517) #18	Parpbp (ENSRNOG00000004682) #20	Pmch (ENSRNOG00000066777) #19	Nup37 (ENSRNOG00000004727) #21	Washc3 (ENSRNOG00000005102) #22	Dram1 (ENSRNOG00000038916) #23	Gnptab (ENSRNOG00000005228) #24	Chpt1 (ENSRNOG00000058271) #26	Sycp3 (ENSRNOG00000005270) #25	Mybpc1 (ENSRNOG00000056493) #27	Spic (ENSRNOG00000005720) #28	Rps12l4 (ENSRNOG00000043412)	Arl1 (ENSRNOG00000005763) #29	Utp20 (ENSRNOG00000005823) #30	Slc5a8 (ENSRNOG00000006367) #31	Ano4 (ENSRNOG00000006841) #32	AABR07056556.1 (ENSRNOG00000032424)	LOC103692829 (ENSRNOG00000061320)	Gas2l3 (ENSRNOG00000063755) #34	Nr1h4 (ENSRNOG00000007197) #35
Upper Galilee mountains blind mole rat	MODERN SPECIES	793									Ascl1 (ENSNGAG00000022000) #16	ENSNGAG00000016358	ENSNGAG00000011019 #17	Igf1 (ENSNGAG00000020397) #18	Pmch (ENSNGAG00000018417) #19	ENSNGAG00000021509 #20	Nup37 (ENSNGAG00000010231) #21	Washc3 (ENSNGAG00000015536) #22	Dram1 (ENSNGAG00000011640) #23	ENSNGAG00000002265 #24	ENSNGAG00000017287 #24	Sycp3 (ENSNGAG00000005942) #25	Chpt1 (ENSNGAG00000001936) #26	Mybpc1 (ENSNGAG00000021514) #27	Spic (ENSNGAG00000022893) #28	ENSNGAG00000007879 #29	Utp20 (ENSNGAG00000013738) #30	Slc5a8 (ENSNGAG00000024154) #31	Ano4 (ENSNGAG00000023912) #32	ENSNGAG00000014559 #34	Nr1h4 (ENSNGAG00000023902) #35
Lesser Egyptian jerboa	MODERN SPECIES	42	ENSJJAG00000021684 #7	Hcfc2 (ENSJJAG00000019901) #8	Glt8d2 (ENSJJAG00000017860) #9	ENSJJAG00000022782 #10	Hsp90b1 (ENSJJAG00000020393) #12	Ttc41 (ENSJJAG00000009462)	Nt5dc3 (ENSJJAG00000017888) #13	Stab2 (ENSJJAG00000015484) #14	ENSJJAG00000018477	Ascl1 (ENSJJAG00000016132) #16	Pah (ENSJJAG00000017337) #17	ENSJJAG00000019988 #18	Pmch (ENSJJAG00000021592) #19	ENSJJAG00000021125 #20	Nup37 (ENSJJAG00000018864) #21	Washc3 (ENSJJAG00000019930) #22	Dram1 (ENSJJAG00000023953) #23	ENSJJAG00000022706 #24	Sycp3 (ENSJJAG00000017653) #25	ENSJJAG00000001967 #26	Mybpc1 (ENSJJAG00000020768) #27	ENSJJAG00000020719 #29	Utp20 (ENSJJAG00000019321) #30	Slc5a8 (ENSJJAG00000018761) #31	Ano4 (ENSJJAG00000021544) #32	ENSJJAG00000017605 #34	Nr1h4 (ENSJJAG00000017445) #35	Slc17a8 (ENSJJAG00000016274) #36	ENSJJAG00000014007 #37	Actr6 (ENSJJAG00000012412)	Uhrf1bp1l (ENSJJAG00000023679)
Kangaroo rat	MODERN SPECIES	322	Hcfc2 (ENSDORG00000001029) #8	Glt8d2 (ENSDORG00000005554) #9	Tdg (ENSDORG00000005552) #10	ENSDORG00000024851 #11	Hsp90b1 (ENSDORG00000005546) #12	Ttc41 (ENSDORG00000027656)	Nt5dc3 (ENSDORG00000014885) #13	Stab2 (ENSDORG00000014881) #14	ENSDORG00000000611 #17	ENSDORG00000028455	Igf1 (ENSDORG00000000240) #18	ENSDORG00000023498	Pmch (ENSDORG00000029881) #19	ENSDORG00000026954 #20	Nup37 (ENSDORG00000002780) #21	Washc3 (ENSDORG00000029910) #22	Dram1 (ENSDORG00000003107) #23	Gnptab (ENSDORG00000023503) #24	ENSDORG00000004032 #25	Chpt1 (ENSDORG00000004030) #26	Mybpc1 (ENSDORG00000004026) #27	Spic (ENSDORG00000003709) #28	Arl1 (ENSDORG00000014770) #29	Utp20 (ENSDORG00000014762) #30	Slc5a8 (ENSDORG00000013252) #31	Ano4 (ENSDORG00000001013) #32	ENSDORG00000001225 #34	Nr1h4 (ENSDORG00000001224) #35	Slc17a8 (ENSDORG00000029543) #36	ENSDORG00000003101 #37	Actr6 (ENSDORG00000012723)
Rodentia_A	ANCESTRAL SPECIES	4	ENSGT00940000160733 #8	ENSGT00940000158078 #9	ENSGT00390000000987 #10	ENSGT00390000007685 #11	ENSGT01020000230401.b.a #12	ENSGT00530000064216	ENSGT00940000158637 #13	ENSGT00940000156566 #14	ENSGT00390000015477 #15	ENSGT00940000162483 #16	ENSGT00950000182885.B #17	ENSGT00940000159081 #18	ENSGT00390000004984 #19	ENSGT00390000006088 #20	ENSGT00390000010777 #21	ENSGT00390000014084 #22	ENSGT01030000234578.B.a #23	ENSGT00390000006747 #24	ENSGT00390000000062.x.a #25	ENSGT00950000183117.a.a #26	ENSGT00940000158254 #27	ENSGT00940000155067.a #28	ENSGT00940000155118 #29	ENSGT00390000016813 #30	ENSGT00940000155166.A #31	ENSGT00940000158600 #32	ENSGT00940000159389 #34	ENSGT00940000158037 #35	ENSGT00940000158187 #36	ENSGT00880000138031 #37	ENSGT00720000108833
Hystricomorpha	ANCESTRAL SPECIES	9	ENSGT00940000165197	ENSGT00940000154917 #7	ENSGT00940000160733 #8	ENSGT00940000158078 #9	ENSGT00390000000987 #10	ENSGT00390000007685 #11	ENSGT01020000230401.b.a #12	ENSGT00940000158637 #13	ENSGT00940000156566 #14	ENSGT00940000162483 #16	ENSGT00950000182885.B #17	ENSGT00940000159081 #18	ENSGT00390000004984 #19	ENSGT00390000006088 #20	ENSGT00390000010777 #21	ENSGT00390000014084 #22	ENSGT01030000234578.B.a #23	ENSGT00390000006747 #24	ENSGT00390000000062.x.a #25	ENSGT00950000183117.a.a #26	ENSGT00940000158254 #27	ENSGT00940000155067.a #28	ENSGT00940000155118 #29	ENSGT00390000016813 #30	ENSGT00940000155166.A #31	ENSGT00940000158600 #32	ENSGT00940000159389 #34	ENSGT00940000158037 #35	ENSGT00940000158187 #36	ENSGT00880000138031 #37	ENSGT00720000108833
Hystricomorpha_a	ANCESTRAL SPECIES	7	ENSGT00940000160180	ENSGT00940000154917 #7	ENSGT00940000160733 #8	ENSGT00940000158078 #9	ENSGT00390000000987 #10	ENSGT00390000007685 #11	ENSGT01020000230401.b.a #12	ENSGT00940000158637 #13	ENSGT00940000156566 #14	ENSGT00940000162483 #16	ENSGT00950000182885.B #17	ENSGT00940000159081 #18	ENSGT00390000004984 #19	ENSGT00390000006088 #20	ENSGT00390000010777 #21	ENSGT00390000014084 #22	ENSGT01030000234578.B.a #23	ENSGT00390000006747 #24	ENSGT00390000000062.x.a #25	ENSGT00950000183117.a.a #26	ENSGT00940000158254 #27	ENSGT00940000155067.a #28	ENSGT00940000155118 #29	ENSGT00390000016813 #30	ENSGT00940000155166.A #31	ENSGT00940000158600 #32	ENSGT00940000159389 #34	ENSGT00940000158037 #35	ENSGT00940000158187 #36	ENSGT00880000138031 #37	ENSGT00720000108833
Hystricomorpha_b	ANCESTRAL SPECIES	13	ENSGT00940000160180	ENSGT00940000154917 #7	ENSGT00940000160733 #8	ENSGT00940000158078 #9	ENSGT00390000000987 #10	ENSGT00390000007685 #11	ENSGT01020000230401.b.a #12	ENSGT00940000158637 #13	ENSGT00940000156566 #14	ENSGT00940000162483 #16	ENSGT00950000182885.B #17	ENSGT00940000159081 #18	ENSGT00390000004984 #19	ENSGT00390000006088 #20	ENSGT00390000010777 #21	ENSGT00390000014084 #22	ENSGT01030000234578.B.a #23	ENSGT00390000006747 #24	ENSGT00390000000062.x.a #25	ENSGT00950000183117.a.a #26	ENSGT00940000158254 #27	ENSGT00940000155067.a #28	ENSGT00940000155118.y.a #29	ENSGT00390000016813 #30	ENSGT00940000155166.A #31	ENSGT00940000158600 #32	ENSGT00940000159389 #34	ENSGT00940000158037 #35	ENSGT00940000158187 #36	ENSGT00880000138031 #37	ENSGT00720000108833
Long-tailed chinchilla	MODERN SPECIES	112	TXNRD1 (ENSCLAG00000008379)	NFYB (ENSCLAG00000007970) #7	HCFC2 (ENSCLAG00000009125) #8	GLT8D2 (ENSCLAG00000008665) #9	TDG (ENSCLAG00000008462) #10	UQCC6 (ENSCLAG00000008186) #11	HSP90B1 (ENSCLAG00000010202) #12	NT5DC3 (ENSCLAG00000009040) #13	STAB2 (ENSCLAG00000009901) #14	ASCL1 (ENSCLAG00000007149) #16	PAH (ENSCLAG00000008747) #17	IGF1 (ENSCLAG00000013488) #18	PMCH (ENSCLAG00000012041) #19	PARPBP (ENSCLAG00000011263) #20	NUP37 (ENSCLAG00000012249) #21	WASHC3 (ENSCLAG00000008749) #22	DRAM1 (ENSCLAG00000008068) #23	GNPTAB (ENSCLAG00000007404) #24	SYCP3 (ENSCLAG00000006962) #25	ENSCLAG00000012024 #26	MYBPC1 (ENSCLAG00000006936) #27	SPIC (ENSCLAG00000016048) #28	ARL1 (ENSCLAG00000008180) #29	UTP20 (ENSCLAG00000011569) #30	SLC5A8 (ENSCLAG00000009574) #31	ANO4 (ENSCLAG00000014090) #32	GAS2L3 (ENSCLAG00000007654) #34	NR1H4 (ENSCLAG00000012775) #35	ENSCLAG00000015655	SLC17A8 (ENSCLAG00000011320) #36	SCYL2 (ENSCLAG00000010496) #37
Degu	MODERN SPECIES	45	TXNRD1 (ENSODEG00000012061)	NFYB (ENSODEG00000011274) #7	HCFC2 (ENSODEG00000011775) #8	GLT8D2 (ENSODEG00000010825) #9	TDG (ENSODEG00000010988) #10	HSP90B1 (ENSODEG00000013762) #12	NT5DC3 (ENSODEG00000012442) #13	STAB2 (ENSODEG00000010415) #14	ENSODEG00000019788	ASCL1 (ENSODEG00000019928) #16	PAH (ENSODEG00000011066) #17	IGF1 (ENSODEG00000010967) #18	PMCH (ENSODEG00000012274) #19	PARPBP (ENSODEG00000012004) #20	NUP37 (ENSODEG00000011637) #21	WASHC3 (ENSODEG00000010588) #22	DRAM1 (ENSODEG00000011613) #23	GNPTAB (ENSODEG00000012289) #24	SYCP3 (ENSODEG00000011961) #25	CHPT1 (ENSODEG00000011230) #26	MYBPC1 (ENSODEG00000012077) #27	ENSODEG00000010424	SPIC (ENSODEG00000010078) #28	ENSODEG00000010531 #29	UTP20 (ENSODEG00000013411) #30	SLC5A8 (ENSODEG00000010696) #31	ENSODEG00000010202	ANO4 (ENSODEG00000011009) #32	ENSODEG00000009780	ENSODEG00000010407 #34	NR1H4 (ENSODEG00000012027) #35
Guinea pig	MODERN SPECIES	9										ASCL1 (ENSCPOG00000020666) #16	PAH (ENSCPOG00000012024) #17	IGF1 (ENSCPOG00000023247) #18	PARPBP (ENSCPOG00000010292) #20	PMCH (ENSCPOG00000010297) #19	NUP37 (ENSCPOG00000011895) #21	WASHC3 (ENSCPOG00000036997) #22	ENSCPOG00000034099 #23	GNPTAB (ENSCPOG00000022501) #24	SYCP3 (ENSCPOG00000001202) #25	CHPT1 (ENSCPOG00000001199) #26	MYBPC1 (ENSCPOG00000011180) #27	SPIC (ENSCPOG00000007301) #28	ARL1 (ENSCPOG00000026014) #29	UTP20 (ENSCPOG00000003129) #30	SLC5A8 (ENSCPOG00000010055) #31	ANO4 (ENSCPOG00000008963) #32	GAS2L3 (ENSCPOG00000036868) #34	NR1H4 (ENSCPOG00000002168) #35	SLC17A8 (ENSCPOG00000009083) #36	SCYL2 (ENSCPOG00000015459) #37	ACTR6 (ENSCPOG00000024022)
Naked mole-rat female	DUPLICATION
Naked mole-rat female	MODERN SPECIES	28	GADL1 (ENSHGLG00000002767)	ENSHGLG00000038856	ENSHGLG00000007708	ENSHGLG00000048329	ENSHGLG00000003049	OSBPL10 (ENSHGLG00000003154)	GPD1L (ENSHGLG00000046132)	ENSHGLG00000035456	ENSHGLG00000047272	ENSHGLG00000037369	CMTM8 (ENSHGLG00000003541)	CMTM7 (ENSHGLG00000001487)	ENSHGLG00000034894	ENSHGLG00000001574	ENSHGLG00000001731	ENSHGLG00000019891 #22	ENSHGLG00000039776	ENSHGLG00000047516	ENSHGLG00000001826	ENSHGLG00000002090	GLB1 (ENSHGLG00000002150)	ENSHGLG00000002496	ENSHGLG00000037229	CRTAP (ENSHGLG00000002614)	SUSD5 (ENSHGLG00000040528)	ENSHGLG00000037082	ENSHGLG00000002747	FBXL2 (ENSHGLG00000002144)	UBP1 (ENSHGLG00000002333)	ENSHGLG00000003013	PDCD6IP (ENSHGLG00000004033)
Naked mole-rat female	MODERN SPECIES	8	HCFC2 (ENSHGLG00000010173) #8	GLT8D2 (ENSHGLG00000008385) #9	TDG (ENSHGLG00000009533) #10	UQCC6 (ENSHGLG00000011427) #11	HSP90B1 (ENSHGLG00000012634) #12	ENSHGLG00000050049	NT5DC3 (ENSHGLG00000004867) #13	STAB2 (ENSHGLG00000007127) #14	ENSHGLG00000045149	ASCL1 (ENSHGLG00000049166) #16	PAH (ENSHGLG00000049587) #17	IGF1 (ENSHGLG00000042203) #18	PMCH (ENSHGLG00000017152) #19	PARPBP (ENSHGLG00000008347) #20	NUP37 (ENSHGLG00000008444) #21	ENSHGLG00000046968 #22	DRAM1 (ENSHGLG00000009546) #23	ENSHGLG00000034643 #24	SYCP3 (ENSHGLG00000004845) #25	ENSHGLG00000005709 #26	ENSHGLG00000039302	ENSHGLG00000050337 #27	SPIC (ENSHGLG00000039584) #28	ENSHGLG00000044877	ENSHGLG00000046315 #29	SLC5A8 (ENSHGLG00000008465) #31	ANO4 (ENSHGLG00000010936) #32	ENSHGLG00000039506	ENSHGLG00000006370	NR1H4 (ENSHGLG00000038152) #35	SLC17A8 (ENSHGLG00000004252) #36
Sciuridae	ANCESTRAL SPECIES	14	ENSGT00940000160733 #8	ENSGT00940000158078 #9	ENSGT00390000000987 #10	ENSGT00390000007685 #11	ENSGT01020000230401.b.a #12	ENSGT00530000064216	ENSGT00940000158637 #13	ENSGT00940000156566 #14	ENSGT00390000015477 #15	ENSGT00940000162483 #16	ENSGT00950000182885.B #17	ENSGT00940000159081 #18	ENSGT00390000004984 #19	ENSGT00390000006088 #20	ENSGT00390000010777 #21	ENSGT00390000014084 #22	ENSGT01030000234578.B.a #23	ENSGT00390000006747 #24	ENSGT00390000000062.x.a #25	ENSGT00950000183117.a.a #26	ENSGT00940000158254 #27	ENSGT00940000155067.a #28	ENSGT00940000155118 #29	ENSGT00390000016813 #30	ENSGT00940000155166.A #31	ENSGT00940000158600 #32	ENSGT00940000159389 #34	ENSGT00940000158037 #35	ENSGT00940000158187 #36	ENSGT00880000138031 #37	ENSGT00720000108833
Marmotini	ANCESTRAL SPECIES	4	ENSGT00940000160733 #8	ENSGT00940000158078 #9	ENSGT00390000000987 #10	ENSGT00390000007685 #11	ENSGT01020000230401.b.a #12	ENSGT00530000064216	ENSGT00940000158637 #13	ENSGT00940000156566 #14	ENSGT00390000015477 #15	ENSGT00940000162483 #16	ENSGT00950000182885.B #17	ENSGT00940000159081 #18	ENSGT00390000004984 #19	ENSGT00390000006088 #20	ENSGT00390000010777 #21	ENSGT00390000014084 #22	ENSGT01030000234578.B.a #23	ENSGT00390000006747 #24	ENSGT00390000000062.x.a #25	ENSGT00950000183117.a.a #26	ENSGT00940000158254 #27	ENSGT00940000155067.a.e #28	ENSGT00940000155118 #29	ENSGT00390000016813 #30	ENSGT00940000155166.A #31	ENSGT00940000158600 #32	ENSGT00940000159389 #34	ENSGT00940000158037 #35	ENSGT00940000158187 #36	ENSGT00880000138031 #37	ENSGT00720000108833
Marmotini_b	ANCESTRAL SPECIES	3	ENSGT00940000160733 #8	ENSGT00940000158078 #9	ENSGT00390000000987 #10	ENSGT00390000007685 #11	ENSGT01020000230401.b.a #12	ENSGT00530000064216	ENSGT00940000158637 #13	ENSGT00940000156566 #14	ENSGT00390000015477 #15	ENSGT00940000162483 #16	ENSGT00950000182885.B #17	ENSGT00940000159081 #18	ENSGT00390000004984 #19	ENSGT00390000006088 #20	ENSGT00390000010777 #21	ENSGT00390000014084 #22	ENSGT01030000234578.B.a #23	ENSGT00390000006747 #24	ENSGT00390000000062.x.a #25	ENSGT00950000183117.a.a #26	ENSGT00940000158254 #27	ENSGT00940000155067.a.e #28	ENSGT00940000155118 #29	ENSGT00390000016813 #30	ENSGT00940000155166.A #31	ENSGT00940000158600 #32	ENSGT00940000159389 #34	ENSGT00940000158037 #35	ENSGT00940000158187 #36	ENSGT00880000138031 #37	ENSGT00720000108833
Squirrel	MODERN SPECIES	92	ENSSTOG00000005279 #7	HCFC2 (ENSSTOG00000005248) #8	GLT8D2 (ENSSTOG00000001337) #9	TDG (ENSSTOG00000001330) #10	UQCC6 (ENSSTOG00000005332) #11	HSP90B1 (ENSSTOG00000005302) #12	ENSSTOG00000005262	NT5DC3 (ENSSTOG00000005239) #13	STAB2 (ENSSTOG00000005112) #14	ASCL1 (ENSSTOG00000028420) #16	PAH (ENSSTOG00000013002) #17	IGF1 (ENSSTOG00000015842) #18	PMCH (ENSSTOG00000015668) #19	PARPBP (ENSSTOG00000015665) #20	NUP37 (ENSSTOG00000001874) #21	WASHC3 (ENSSTOG00000029775) #22	DRAM1 (ENSSTOG00000001865) #23	GNPTAB (ENSSTOG00000001855) #24	SYCP3 (ENSSTOG00000001853) #25	CHPT1 (ENSSTOG00000011736) #26	MYBPC1 (ENSSTOG00000003034) #27	ENSSTOG00000015457 #28	ARL1 (ENSSTOG00000016022) #29	UTP20 (ENSSTOG00000015995) #30	SLC5A8 (ENSSTOG00000016289) #31	ANO4 (ENSSTOG00000016283) #32	GAS2L3 (ENSSTOG00000011780) #34	NR1H4 (ENSSTOG00000011771) #35	SLC17A8 (ENSSTOG00000011763) #36	SCYL2 (ENSSTOG00000011753) #37	ACTR6 (ENSSTOG00000004895)
Arctic ground squirrel	MODERN SPECIES	6	HCFC2 (ENSUPAG00010002459) #8	GLT8D2 (ENSUPAG00010002486) #9	ENSUPAG00010002507 #10	ENSUPAG00010002519 #11	HSP90B1 (ENSUPAG00010002523) #12	ENSUPAG00010002542	NT5DC3 (ENSUPAG00010002555) #13	STAB2 (ENSUPAG00010002607) #14	ENSUPAG00010002702 #15	ASCL1 (ENSUPAG00010002712) #16	PAH (ENSUPAG00010002718) #17	IGF1 (ENSUPAG00010002768) #18	PMCH (ENSUPAG00010002847) #19	PARPBP (ENSUPAG00010002861) #20	NUP37 (ENSUPAG00010002890) #21	WASHC3 (ENSUPAG00010002918) #22	DRAM1 (ENSUPAG00010002927) #23	GNPTAB (ENSUPAG00010002938) #24	SYCP3 (ENSUPAG00010002966) #25	CHPT1 (ENSUPAG00010002983) #26	MYBPC1 (ENSUPAG00010002997) #27	ARL1 (ENSUPAG00010003075) #29	UTP20 (ENSUPAG00010003081) #30	SLC5A8 (ENSUPAG00010003154) #31	ANO4 (ENSUPAG00010003185) #32	ENSUPAG00010003346	GAS2L3 (ENSUPAG00010003356) #34	NR1H4 (ENSUPAG00010003387) #35	SLC17A8 (ENSUPAG00010003443) #36	SCYL2 (ENSUPAG00010003458) #37	ACTR6 (ENSUPAG00010003498)
Alpin marmot	MODERN SPECIES	11	GLT8D2 (ENSMMMG00000017374) #9	TDG (ENSMMMG00000017385) #10	UQCC6 (ENSMMMG00000017405) #11	HSP90B1 (ENSMMMG00000017425) #12	ENSMMMG00000017434	NT5DC3 (ENSMMMG00000017455) #13	STAB2 (ENSMMMG00000017521) #14	ENSMMMG00000017557 #15	ASCL1 (ENSMMMG00000017578) #16	PAH (ENSMMMG00000017579) #17	IGF1 (ENSMMMG00000017621) #18	ENSMMMG00000017639	PMCH (ENSMMMG00000017651) #19	PARPBP (ENSMMMG00000017655) #20	NUP37 (ENSMMMG00000017664) #21	WASHC3 (ENSMMMG00000017678) #22	DRAM1 (ENSMMMG00000017688) #23	GNPTAB (ENSMMMG00000017694) #24	SYCP3 (ENSMMMG00000017715) #25	CHPT1 (ENSMMMG00000017731) #26	MYBPC1 (ENSMMMG00000017763) #27	SPIC (ENSMMMG00000017812) #28	ARL1 (ENSMMMG00000017821) #29	UTP20 (ENSMMMG00000017841) #30	SLC5A8 (ENSMMMG00000017894) #31	ANO4 (ENSMMMG00000017942) #32	GAS2L3 (ENSMMMG00000018095) #34	NR1H4 (ENSMMMG00000018110) #35	SLC17A8 (ENSMMMG00000018190) #36	SCYL2 (ENSMMMG00000018205) #37	ACTR6 (ENSMMMG00000018236)
Eurasian red squirrel	MODERN SPECIES	14	GLT8D2 (ENSSVLG00005010282) #9	TDG (ENSSVLG00005010197) #10	UQCC6 (ENSSVLG00005010173) #11	HSP90B1 (ENSSVLG00005010143) #12	NT5DC3 (ENSSVLG00005009787) #13	STAB2 (ENSSVLG00005009369) #14	ENSSVLG00005009324	ASCL1 (ENSSVLG00005009307) #16	PAH (ENSSVLG00005009231) #17	IGF1 (ENSSVLG00005009161) #18	ENSSVLG00005009122	PMCH (ENSSVLG00005009086) #19	PARPBP (ENSSVLG00005008928) #20	NUP37 (ENSSVLG00005008871) #21	ENSSVLG00005008830	WASHC3 (ENSSVLG00005008789) #22	DRAM1 (ENSSVLG00005008749) #23	GNPTAB (ENSSVLG00005008675) #24	SYCP3 (ENSSVLG00005008597) #25	CHPT1 (ENSSVLG00005008570) #26	MYBPC1 (ENSSVLG00005007401) #27	ENSSVLG00005007121 #28	ARL1 (ENSSVLG00005007015) #29	UTP20 (ENSSVLG00005010358) #30	ENSSVLG00005010295	SLC5A8 (ENSSVLG00005010200) #31	ANO4 (ENSSVLG00005009692) #32	GAS2L3 (ENSSVLG00005009544) #34	NR1H4 (ENSSVLG00005009339) #35	SLC17A8 (ENSSVLG00005009180) #36	ENSSVLG00005008897 #37
Lagomorpha	ANCESTRAL SPECIES	22	ENSGT00940000159167	ENSGT00940000160180	ENSGT00940000154917 #7	ENSGT00940000160733 #8	ENSGT00940000158078 #9	ENSGT00390000000987 #10	ENSGT00390000007685 #11	ENSGT01020000230401.b.a #12	ENSGT00530000064216	ENSGT00940000158637 #13	ENSGT00940000156566 #14	ENSGT00390000015477 #15	ENSGT00390000004984 #19	ENSGT00390000006088 #20	ENSGT00390000010777 #21	ENSGT00390000014084 #22	ENSGT01030000234578.B.a #23	ENSGT00390000006747 #24	ENSGT00390000000062.x.a #25	ENSGT00950000183117.a.a #26	ENSGT00940000158254 #27	ENSGT00390000016813 #30	ENSGT00940000155166.A #31	ENSGT00940000158600 #32	ENSGT00940000159389 #34	ENSGT00940000158037 #35	ENSGT00940000158187 #36	ENSGT00880000138031 #37	ENSGT00950000182976.a.a	ENSGT00720000108833	ENSGT00600000084428.b
Rabbit	MODERN SPECIES	15	GLT8D2 (ENSOCUG00000016321) #9	TDG (ENSOCUG00000016313) #10	UQCC6 (ENSOCUG00000037470) #11	HSP90B1 (ENSOCUG00000016288) #12	ENSOCUG00000025186	NT5DC3 (ENSOCUG00000016271) #13	STAB2 (ENSOCUG00000016254) #14	C12orf42 (ENSOCUG00000027086) #15	PAH (ENSOCUG00000014890) #17	ENSOCUG00000039430	IGF1 (ENSOCUG00000014689) #18	ENSOCUG00000004875	PMCH (ENSOCUG00000003034) #19	PARPBP (ENSOCUG00000003030) #20	ENSOCUG00000029449 #21	WASHC3 (ENSOCUG00000015171) #22	ENSOCUG00000016500 #23	SYCP3 (ENSOCUG00000009292) #25	GNPTAB (ENSOCUG00000009299) #24	MYBPC1 (ENSOCUG00000009276) #27	ENSOCUG00000033531	ENSOCUG00000008070 #28	ENSOCUG00000030138	ENSOCUG00000029302	ARL1 (ENSOCUG00000002217) #29	UTP20 (ENSOCUG00000010475) #30	ENSOCUG00000037051	SLC5A8 (ENSOCUG00000003486) #31	ENSOCUG00000036878	ANO4 (ENSOCUG00000000881) #32	ENSOCUG00000033171
Pika	MODERN SPECIES	4838												PMCH (ENSOPRG00000001282) #19	ENSOPRG00000001267 #20	NUP37 (ENSOPRG00000001247) #21	ENSOPRG00000001234	WASHC3 (ENSOPRG00000001219) #22	DRAM1 (ENSOPRG00000001206) #23	GNPTAB (ENSOPRG00000001173) #24	ENSOPRG00000001165 #25	CHPT1 (ENSOPRG00000001145) #26	MYBPC1 (ENSOPRG00000001099) #27
Laurasiatheria	ANCESTRAL SPECIES	6	ENSGT00940000160733 #8	ENSGT00940000158078 #9	ENSGT00390000000987 #10	ENSGT00390000007685 #11	ENSGT01020000230401.b.a #12	ENSGT00530000064216	ENSGT00940000158637 #13	ENSGT00940000156566 #14	ENSGT00390000015477 #15	ENSGT00940000162483 #16	ENSGT00950000182885.B #17	ENSGT00940000159081 #18	ENSGT00390000004984 #19	ENSGT00390000006088 #20	ENSGT00390000010777 #21	ENSGT00390000014084 #22	ENSGT01030000234578.B.a #23	ENSGT00390000006747 #24	ENSGT00390000000062.x.a #25	ENSGT00950000183117.a.a #26	ENSGT00940000158254 #27	ENSGT00940000155067.a #28	ENSGT00940000155118.o #29	ENSGT00390000016813 #30	ENSGT00940000155166.A #31	ENSGT00940000158600 #32	ENSGT00940000159389 #34	ENSGT00940000158037 #35	ENSGT00940000158187 #36	ENSGT00880000138031 #37	ENSGT00950000182976.a.a
Laurasiatheria_a	ANCESTRAL SPECIES	6	ENSGT00940000160733 #8	ENSGT00940000158078 #9	ENSGT00390000000987 #10	ENSGT00390000007685 #11	ENSGT01020000230401.b.a #12	ENSGT00530000064216	ENSGT00940000158637 #13	ENSGT00940000156566 #14	ENSGT00390000015477 #15	ENSGT00940000162483 #16	ENSGT00950000182885.B #17	ENSGT00940000159081 #18	ENSGT00390000004984 #19	ENSGT00390000006088 #20	ENSGT00390000010777 #21	ENSGT00390000014084 #22	ENSGT01030000234578.B.a #23	ENSGT00390000006747 #24	ENSGT00390000000062.x.a #25	ENSGT00950000183117.a.a #26	ENSGT00940000158254 #27	ENSGT00940000155067.a #28	ENSGT00940000155118.o #29	ENSGT00390000016813 #30	ENSGT00940000155166.A #31	ENSGT00940000158600 #32	ENSGT00940000159389 #34	ENSGT00940000158037 #35	ENSGT00940000158187 #36	ENSGT00880000138031 #37	ENSGT00950000182976.a.a
Laurasiatheria_b	ANCESTRAL SPECIES	6	ENSGT00940000160733 #8	ENSGT00940000158078 #9	ENSGT00390000000987 #10	ENSGT00390000007685 #11	ENSGT01020000230401.b.a #12	ENSGT00530000064216	ENSGT00940000158637 #13	ENSGT00940000156566 #14	ENSGT00390000015477 #15	ENSGT00940000162483 #16	ENSGT00950000182885.B #17	ENSGT00940000159081 #18	ENSGT00390000004984 #19	ENSGT00390000006088 #20	ENSGT00390000010777 #21	ENSGT00390000014084 #22	ENSGT01030000234578.B.a #23	ENSGT00390000006747 #24	ENSGT00390000000062.x.a #25	ENSGT00950000183117.a.a #26	ENSGT00940000158254 #27	ENSGT00940000155067.a #28	ENSGT00940000155118.o #29	ENSGT00390000016813 #30	ENSGT00940000155166.A #31	ENSGT00940000158600 #32	ENSGT00940000159389 #34	ENSGT00940000158037 #35	ENSGT00940000158187 #36	ENSGT00880000138031 #37	ENSGT00950000182976.a.a
Carnivora	ANCESTRAL SPECIES	3	ENSGT00940000160733 #8	ENSGT00940000158078 #9	ENSGT00390000000987 #10	ENSGT00390000007685 #11	ENSGT01020000230401.b.a #12	ENSGT00530000064216	ENSGT00940000158637 #13	ENSGT00940000156566 #14	ENSGT00390000015477 #15	ENSGT00940000162483 #16	ENSGT00950000182885.B #17	ENSGT00940000159081 #18	ENSGT00390000004984 #19	ENSGT00390000006088 #20	ENSGT00390000010777 #21	ENSGT00390000014084 #22	ENSGT01030000234578.B.a #23	ENSGT00390000006747 #24	ENSGT00390000000062.x.a #25	ENSGT00950000183117.a.a #26	ENSGT00940000158254 #27	ENSGT00940000155067.a #28	ENSGT00940000155118.o #29	ENSGT00390000016813 #30	ENSGT00940000155166.A #31	ENSGT00940000158600 #32	ENSGT00940000159389 #34	ENSGT00940000158037 #35	ENSGT00940000158187 #36	ENSGT00880000138031 #37	ENSGT00720000108833
Felidae	ANCESTRAL SPECIES	2	ENSGT00940000154917 #7	ENSGT00940000160733 #8	ENSGT00940000158078 #9	ENSGT00390000000987 #10	ENSGT00390000007685 #11	ENSGT01020000230401.b.a #12	ENSGT00940000158637 #13	ENSGT00940000156566 #14	ENSGT00390000015477 #15	ENSGT00940000162483 #16	ENSGT00950000182885.B #17	ENSGT00940000159081 #18	ENSGT00390000004984 #19	ENSGT00390000006088 #20	ENSGT00390000010777 #21	ENSGT00390000014084 #22	ENSGT01030000234578.B.a #23	ENSGT00390000006747 #24	ENSGT00390000000062.x.a #25	ENSGT00950000183117.a.a #26	ENSGT00940000158254 #27	ENSGT00940000155067.a #28	ENSGT00940000155118.o #29	ENSGT00390000016813 #30	ENSGT00940000155166.A #31	ENSGT00940000158600 #32	ENSGT00940000159389 #34	ENSGT00940000158037 #35	ENSGT00940000158187 #36	ENSGT00880000138031 #37	ENSGT00720000108833
Cat	MODERN SPECIES	238	NFYB (ENSFCAG00000026471) #7	HCFC2 (ENSFCAG00000014081) #8	GLT8D2 (ENSFCAG00000029578) #9	TDG (ENSFCAG00000014079) #10	UQCC6 (ENSFCAG00000014078) #11	HSP90B1 (ENSFCAG00000014077) #12	NT5DC3 (ENSFCAG00000019230) #13	STAB2 (ENSFCAG00000007290) #14	ENSFCAG00000048583 #15	ASCL1 (ENSFCAG00000008250) #16	PAH (ENSFCAG00000008519) #17	IGF1 (ENSFCAG00000024009) #18	PMCH (ENSFCAG00000040803) #19	PARPBP (ENSFCAG00000015268) #20	NUP37 (ENSFCAG00000032244) #21	WASHC3 (ENSFCAG00000019358) #22	ENSFCAG00000041340 #23	SYCP3 (ENSFCAG00000024568) #25	CHPT1 (ENSFCAG00000030275) #26	GNPTAB (ENSFCAG00000008281) #24	MYBPC1 (ENSFCAG00000025799) #27	SPIC (ENSFCAG00000034240) #28	ARL1 (ENSFCAG00000030871) #29	UTP20 (ENSFCAG00000006150) #30	SLC5A8 (ENSFCAG00000031580) #31	ANO4 (ENSFCAG00000006147) #32	GAS2L3 (ENSFCAG00000023152) #34	NR1H4 (ENSFCAG00000006469) #35	SLC17A8 (ENSFCAG00000018638) #36	SCYL2 (ENSFCAG00000028913) #37	ACTR6 (ENSFCAG00000025056)
Panthera	ANCESTRAL SPECIES		ENSGT00940000159167	ENSGT00940000160180	ENSGT00940000154917 #7	ENSGT00940000160733 #8	ENSGT00940000158078 #9	ENSGT00390000000987 #10	ENSGT00390000007685 #11	ENSGT01020000230401.b.a #12	ENSGT00940000158637 #13	ENSGT00940000156566 #14	ENSGT00950000182885.B #17	ENSGT00940000159081 #18	ENSGT00390000004984 #19	ENSGT00390000006088 #20	ENSGT00390000010777 #21	ENSGT00390000014084 #22	ENSGT01030000234578.B.a #23	ENSGT00390000006747 #24	ENSGT00390000000062.x.a #25	ENSGT00950000183117.a.a #26	ENSGT00940000158254 #27	ENSGT00940000155067.a #28	ENSGT00940000155118.o #29	ENSGT00390000016813 #30	ENSGT00940000155166.A #31	ENSGT00940000158600 #32	ENSGT00940000159389 #34	ENSGT00940000158037 #35	ENSGT00940000158187 #36	ENSGT00880000138031 #37	ENSGT00720000108833
Panthera_a	ANCESTRAL SPECIES	12	ENSGT00940000159167	ENSGT00940000160180	ENSGT00940000154917 #7	ENSGT00940000160733 #8	ENSGT00940000158078 #9	ENSGT00390000000987 #10	ENSGT00390000007685 #11	ENSGT01020000230401.b.a #12	ENSGT00940000158637 #13	ENSGT00940000156566 #14	ENSGT00950000182885.B #17	ENSGT00940000159081 #18	ENSGT00390000004984 #19	ENSGT00390000006088 #20	ENSGT00390000010777 #21	ENSGT00390000014084 #22	ENSGT01030000234578.B.a #23	ENSGT00390000006747 #24	ENSGT00390000000062.x.a #25	ENSGT00950000183117.a.a #26	ENSGT00940000158254 #27	ENSGT00940000155067.a #28	ENSGT00940000155118.o #29	ENSGT00390000016813 #30	ENSGT00940000155166.A #31	ENSGT00940000158600 #32	ENSGT00940000159389 #34	ENSGT00940000158037 #35	ENSGT00940000158187 #36	ENSGT00880000138031 #37	ENSGT00720000108833
lion	MODERN SPECIES	7	TXNRD1 (ENSPLOG00000021406)	NFYB (ENSPLOG00000021286) #7	HCFC2 (ENSPLOG00000021251) #8	GLT8D2 (ENSPLOG00000021181) #9	TDG (ENSPLOG00000021131) #10	UQCC6 (ENSPLOG00000021114) #11	ENSPLOG00000021063 #12	ENSPLOG00000020955 #12	NT5DC3 (ENSPLOG00000020837) #13	STAB2 (ENSPLOG00000020621) #14	PAH (ENSPLOG00000020332) #17	IGF1 (ENSPLOG00000020253) #18	PMCH (ENSPLOG00000020209) #19	PARPBP (ENSPLOG00000020115) #20	NUP37 (ENSPLOG00000020039) #21	WASHC3 (ENSPLOG00000020005) #22	ENSPLOG00000019950 #23	GNPTAB (ENSPLOG00000019819) #24	SYCP3 (ENSPLOG00000019730) #25	CHPT1 (ENSPLOG00000019674) #26	MYBPC1 (ENSPLOG00000018049) #27	SPIC (ENSPLOG00000017845) #28	ARL1 (ENSPLOG00000017729) #29	UTP20 (ENSPLOG00000017260) #30	SLC5A8 (ENSPLOG00000017103) #31	ANO4 (ENSPLOG00000016494) #32	GAS2L3 (ENSPLOG00000016298) #34	NR1H4 (ENSPLOG00000015968) #35	SLC17A8 (ENSPLOG00000015751) #36	SCYL2 (ENSPLOG00000015630) #37	ACTR6 (ENSPLOG00000015509)
leopard	MODERN SPECIES	13	ENSPPRG00000004363	TXNRD1 (ENSPPRG00000010028)	NFYB (ENSPPRG00000010826) #7	HCFC2 (ENSPPRG00000011330) #8	GLT8D2 (ENSPPRG00000012524) #9	TDG (ENSPPRG00000013124) #10	UQCC6 (ENSPPRG00000013349) #11	HSP90B1 (ENSPPRG00000014461) #12	NT5DC3 (ENSPPRG00000018102) #13	STAB2 (ENSPPRG00000023837) #14	PAH (ENSPPRG00000022926) #17	IGF1 (ENSPPRG00000000922) #18	PMCH (ENSPPRG00000001052) #19	PARPBP (ENSPPRG00000001300) #20	NUP37 (ENSPPRG00000002447) #21	WASHC3 (ENSPPRG00000002578) #22	DRAM1 (ENSPPRG00000002977) #23	GNPTAB (ENSPPRG00000004479) #24	SYCP3 (ENSPPRG00000005146) #25	CHPT1 (ENSPPRG00000005602) #26	MYBPC1 (ENSPPRG00000015376) #27	SPIC (ENSPPRG00000018294) #28	ARL1 (ENSPPRG00000023908) #29	UTP20 (ENSPPRG00000001026) #30	ENSPPRG00000001800	SLC5A8 (ENSPPRG00000001967) #31	ANO4 (ENSPPRG00000003419) #32	GAS2L3 (ENSPPRG00000003634) #34	NR1H4 (ENSPPRG00000004482) #35	SLC17A8 (ENSPPRG00000006251) #36	SCYL2 (ENSPPRG00000007538) #37
Tiger	MODERN SPECIES	229											PAH (ENSPTIG00000016305) #17	IGF1 (ENSPTIG00000015912) #18	PMCH (ENSPTIG00000015603) #19	PARPBP (ENSPTIG00000015056) #20	NUP37 (ENSPTIG00000014283) #21	WASHC3 (ENSPTIG00000014177) #22	DRAM1 (ENSPTIG00000013781) #23	GNPTAB (ENSPTIG00000012080) #24	SYCP3 (ENSPTIG00000011557) #25	CHPT1 (ENSPTIG00000010811) #26	MYBPC1 (ENSPTIG00000005437) #27	SPIC (ENSPTIG00000002890) #28	ENSPTIG00000002154 #29	UTP20 (ENSPTIG00000020972) #30	SLC5A8 (ENSPTIG00000020155) #31	ANO4 (ENSPTIG00000018267) #32	GAS2L3 (ENSPTIG00000017778) #34	NR1H4 (ENSPTIG00000016103) #35	SLC17A8 (ENSPTIG00000014917) #36	SCYL2 (ENSPTIG00000013119) #37	ACTR6 (ENSPTIG00000012245)
Caniformia	ANCESTRAL SPECIES	20	ENSGT00940000160733 #8	ENSGT00940000158078 #9	ENSGT00390000000987 #10	ENSGT00390000007685 #11	ENSGT01020000230401.b.a #12	ENSGT00530000064216	ENSGT00940000158637 #13	ENSGT00940000156566 #14	ENSGT00390000015477 #15	ENSGT00940000162483 #16	ENSGT00950000182885.B #17	ENSGT00940000159081 #18	ENSGT00390000004984 #19	ENSGT00390000006088 #20	ENSGT00390000010777 #21	ENSGT00390000014084 #22	ENSGT01030000234578.B.a #23	ENSGT00390000006747 #24	ENSGT00390000000062.x.a #25	ENSGT00950000183117.a.a #26	ENSGT00940000158254 #27	ENSGT00940000155067.a #28	ENSGT00940000155118.o #29	ENSGT00390000016813 #30	ENSGT00940000155166.A #31	ENSGT00940000158600 #32	ENSGT00940000159389 #34	ENSGT00940000158037 #35	ENSGT00940000158187 #36	ENSGT00880000138031 #37	ENSGT00720000108833
Caniformia_b	ANCESTRAL SPECIES	18	ENSGT00940000160733 #8	ENSGT00940000158078 #9	ENSGT00390000000987 #10	ENSGT00390000007685 #11	ENSGT01020000230401.b.a #12	ENSGT00530000064216	ENSGT00940000158637 #13	ENSGT00940000156566 #14	ENSGT00390000015477 #15	ENSGT00940000162483 #16	ENSGT00950000182885.B #17	ENSGT00940000159081 #18	ENSGT00390000004984 #19	ENSGT00390000006088 #20	ENSGT00390000010777 #21	ENSGT00390000014084 #22	ENSGT01030000234578.B.a #23	ENSGT00390000006747 #24	ENSGT00390000000062.x.a #25	ENSGT00950000183117.a.a #26	ENSGT00940000158254 #27	ENSGT00940000155067.a #28	ENSGT00940000155118.o #29	ENSGT00390000016813 #30	ENSGT00940000155166.A #31	ENSGT00940000158600 #32	ENSGT00940000159389 #34	ENSGT00940000158037 #35	ENSGT00940000158187 #36	ENSGT00880000138031 #37	ENSGT00720000108833
Ursidae	ANCESTRAL SPECIES	13	ENSGT00940000160733 #8	ENSGT00940000158078 #9	ENSGT00390000000987 #10	ENSGT00390000007685 #11	ENSGT01020000230401.b.a #12	ENSGT00530000064216	ENSGT00940000158637 #13	ENSGT00940000156566 #14	ENSGT00390000015477 #15	ENSGT00940000162483 #16	ENSGT00950000182885.B #17	ENSGT00940000159081 #18	ENSGT00390000004984 #19	ENSGT00390000006088 #20	ENSGT00390000010777 #21	ENSGT00390000014084 #22	ENSGT01030000234578.B.a #23	ENSGT00390000006747 #24	ENSGT00390000000062.x.a #25	ENSGT00950000183117.a.a #26	ENSGT00940000158254 #27	ENSGT00940000155067.a #28	ENSGT00940000155118.o #29	ENSGT00390000016813 #30	ENSGT00940000155166.A #31	ENSGT00940000158600 #32	ENSGT00940000159389 #34	ENSGT00940000158037 #35	ENSGT00940000158187 #36	ENSGT00880000138031 #37	ENSGT00720000108833
Ursus	ANCESTRAL SPECIES	29	ENSGT00940000160733 #8	ENSGT00940000158078 #9	ENSGT00390000000987 #10	ENSGT00390000007685 #11	ENSGT00910000148729	ENSGT01020000230401.b.a #12	ENSGT00530000064216	ENSGT00940000158637 #13	ENSGT00940000156566 #14	ENSGT00390000015477 #15	ENSGT00950000182885.B #17	ENSGT00940000159081 #18	ENSGT00390000004984 #19	ENSGT00390000006088 #20	ENSGT00390000010777 #21	ENSGT00390000014084 #22	ENSGT01030000234578.B.a #23	ENSGT00390000006747 #24	ENSGT00390000000062.x.a #25	ENSGT00950000183117.a.a #26	ENSGT00940000158254 #27	ENSGT00940000155067.a #28	ENSGT00940000155118.o #29	ENSGT00390000016813 #30	ENSGT00940000155166.A #31	ENSGT00940000158600 #32	ENSGT00940000159389 #34	ENSGT00940000158037 #35	ENSGT00940000158187 #36	ENSGT00880000138031 #37	ENSGT00720000108833
Polar bear	MODERN SPECIES	280	GLT8D2 (ENSUMAG00000018884) #9	TDG (ENSUMAG00000018889) #10	UQCC6 (ENSUMAG00000018904) #11	ENSUMAG00000018905	ENSUMAG00000018910 #12	ENSUMAG00000018918 #12	ENSUMAG00000018926	NT5DC3 (ENSUMAG00000018941) #13	STAB2 (ENSUMAG00000018988) #14	ENSUMAG00000019174 #15	PAH (ENSUMAG00000019176) #17	IGF1 (ENSUMAG00000019181) #18	PMCH (ENSUMAG00000019185) #19	PARPBP (ENSUMAG00000019190) #20	NUP37 (ENSUMAG00000019205) #21	WASHC3 (ENSUMAG00000019210) #22	DRAM1 (ENSUMAG00000019216) #23	GNPTAB (ENSUMAG00000019219) #24	SYCP3 (ENSUMAG00000019227) #25	CHPT1 (ENSUMAG00000019237) #26	MYBPC1 (ENSUMAG00000019327) #27	SPIC (ENSUMAG00000019543) #28	ARL1 (ENSUMAG00000019547) #29	UTP20 (ENSUMAG00000000077) #30	SLC5A8 (ENSUMAG00000001198) #31	ANO4 (ENSUMAG00000001262) #32	GAS2L3 (ENSUMAG00000001346) #34	NR1H4 (ENSUMAG00000001422) #35	SLC17A8 (ENSUMAG00000001536) #36	SCYL2 (ENSUMAG00000001610) #37	ACTR6 (ENSUMAG00000001633)
American black bear	MODERN SPECIES	4988																WASHC3 (ENSUAMG00000019700) #22	DRAM1 (ENSUAMG00000019698) #23	ENSUAMG00000019697
Mustelinae	ANCESTRAL SPECIES	4	ENSGT00940000158078 #9	ENSGT00390000000987 #10	ENSGT00390000007685 #11	ENSGT01020000230401.b.a #12	ENSGT00530000064216	ENSGT00940000158637 #13	ENSGT00940000156566 #14	ENSGT00390000015477 #15	ENSGT00960000190941	ENSGT00940000162483 #16	ENSGT00950000182885.B #17	ENSGT00940000159081 #18	ENSGT00390000004984 #19	ENSGT00390000006088 #20	ENSGT00390000010777 #21	ENSGT00390000014084 #22	ENSGT01030000234578.B.a #23	ENSGT00390000006747 #24	ENSGT00390000000062.x.a.i #25	ENSGT00950000183117.a.a #26	ENSGT00940000158254 #27	ENSGT00940000155067.a #28	ENSGT00940000155118.o #29	ENSGT00390000016813 #30	ENSGT00940000155166.A #31	ENSGT00940000158600 #32	ENSGT00940000159389 #34	ENSGT00940000158037 #35	ENSGT00940000158187 #36	ENSGT00880000138031 #37	ENSGT00720000108833
American mink	MODERN SPECIES	20	HCFC2 (ENSNVIG00000010702) #8	GL8D2 (ENSNVIG00000010676) #9	TDG (ENSNVIG00000010639) #10	UQCC6 (ENSNVIG00000010617) #11	HSP90B1 (ENSNVIG00000010604) #12	ENSNVIG00000010582	NT5DC3 (ENSNVIG00000010564) #13	STAB2 (ENSNVIG00000010462) #14	ENSNVIG00000010442	ASCL1 (ENSNVIG00000010437) #16	PAH (ENSNVIG00000010407) #17	IGF-I (ENSNVIG00000010348) #18	PMCH (ENSNVIG00000010342) #19	PARPBP (ENSNVIG00000010321) #20	NUP37 (ENSNVIG00000010269) #21	WASHC3 (ENSNVIG00000010251) #22	DRAM1 (ENSNVIG00000010221) #23	GNPTAB (ENSNVIG00000010138) #24	ENSNVIG00000010099 #25	CHPT1 (ENSNVIG00000010091) #26	MYBPC1 (ENSNVIG00000009645) #27	SPIC (ENSNVIG00000009598) #28	ARL1 (ENSNVIG00000009572) #29	UTP20 (ENSNVIG00000009480) #30	SLC5A8 (ENSNVIG00000009429) #31	ANO4 (ENSNVIG00000009287) #32	ENSNVIG00000009266	GAS2L3 (ENSNVIG00000009253) #34	NR1H4 (ENSNVIG00000009191) #35	SLC17A8 (ENSNVIG00000009152) #36	SCYL2 (ENSNVIG00000009103) #37
Ferret	MODERN SPECIES	171	HCFC2 (ENSMPUG00000012052) #8	GLT8D2 (ENSMPUG00000012049) #9	TDG (ENSMPUG00000012042) #10	HSP90B1 (ENSMPUG00000012032) #12	ENSMPUG00000012025	ENSMPUG00000020032	NT5DC3 (ENSMPUG00000012018) #13	STAB2 (ENSMPUG00000011996) #14	ENSMPUG00000011991 #15	PAH (ENSMPUG00000011982) #17	IGF1 (ENSMPUG00000011976) #18	ENSMPUG00000011946	PMCH (ENSMPUG00000011942) #19	PARPBP (ENSMPUG00000011930) #20	NUP37 (ENSMPUG00000011898) #21	WASHC3 (ENSMPUG00000011893) #22	DRAM1 (ENSMPUG00000011890) #23	GNPTAB (ENSMPUG00000011877) #24	CHPT1 (ENSMPUG00000011874) #26	MYBPC1 (ENSMPUG00000011862) #27	SPIC (ENSMPUG00000011857) #28	ARL1 (ENSMPUG00000011822) #29	UTP20 (ENSMPUG00000011641) #30	SLC5A8 (ENSMPUG00000011632) #31	ANO4 (ENSMPUG00000011618) #32	ENSMPUG00000011612	GAS2L3 (ENSMPUG00000011580) #34	NR1H4 (ENSMPUG00000011573) #35	SLC17A8 (ENSMPUG00000011560) #36	SCYL2 (ENSMPUG00000011551) #37	ACTR6 (ENSMPUG00000011507)
Canidae	ANCESTRAL SPECIES	12	ENSGT00940000156733	ENSGT00940000154917 #7	ENSGT00940000160733 #8	ENSGT00940000158078 #9	ENSGT00390000000987 #10	ENSGT00390000007685 #11	ENSGT01020000230401.b.a #12	ENSGT00940000158637 #13	ENSGT00940000156566 #14	ENSGT00940000162483 #16	ENSGT00950000182885.B #17	ENSGT00940000159081 #18	ENSGT00390000004984 #19	ENSGT00390000006088 #20	ENSGT00390000010777 #21	ENSGT00390000014084 #22	ENSGT01030000234578.B.a #23	ENSGT00390000006747 #24	ENSGT00390000000062.x.a #25	ENSGT00950000183117.a.a #26	ENSGT00940000158254 #27	ENSGT00940000155067.a #28	ENSGT00940000155118.o #29	ENSGT00390000016813 #30	ENSGT00940000155166.A #31	ENSGT00940000158600 #32	ENSGT00940000159389 #34	ENSGT00940000158037 #35	ENSGT00940000158187 #36	ENSGT00880000138031 #37	ENSGT00720000108833
Red fox	DUPLICATION
Red fox	MODERN SPECIES	95	SMARCA5 (ENSVVUG00000017473)	HCFC2 (ENSVVUG00000017503) #8	NFYB (ENSVVUG00000017539) #7	GLT8D2 (ENSVVUG00000017543) #9	TDG (ENSVVUG00000017552) #10	CUNH12orf73 (ENSVVUG00000017559) #11	HSP90B1 (ENSVVUG00000017563) #12	NT5DC3 (ENSVVUG00000017589) #13	STAB2 (ENSVVUG00000017690) #14	ASCL1 (ENSVVUG00000017907) #16	PAH (ENSVVUG00000017911) #17	IGF1 (ENSVVUG00000017924) #18	PMCH (ENSVVUG00000017941) #19	PARPBP (ENSVVUG00000017946) #20	NUP37 (ENSVVUG00000017952) #21	WASHC3 (ENSVVUG00000017964) #22	ENSVVUG00000017981	DRAM1 (ENSVVUG00000017987) #23	GNPTAB (ENSVVUG00000018000) #24	SYCP3 (ENSVVUG00000018021) #25	CHPT1 (ENSVVUG00000018026) #26	MYBPC1 (ENSVVUG00000018029) #27	SPIC (ENSVVUG00000018039) #28	ARL1 (ENSVVUG00000018044) #29	UTP20 (ENSVVUG00000018110) #30	SLC5A8 (ENSVVUG00000018468) #31	ENSVVUG00000018488	ANO4 (ENSVVUG00000018492) #32	GAS2L3 (ENSVVUG00000018519) #34	NR1H4 (ENSVVUG00000018520) #35	SLC17A8 (ENSVVUG00000018524) #36
Red fox	MODERN SPECIES	252						ZC4H2 (ENSVVUG00000022682)	ZC3H12B (ENSVVUG00000022686)	ENSVVUG00000022698	ENSVVUG00000022700	LAS1L (ENSVVUG00000022702)	ENSVVUG00000022709	ENSVVUG00000022713	MSN (ENSVVUG00000022717)	ENSVVUG00000022727	VSIG4 (ENSVVUG00000022732)	ENSVVUG00000022739 #22	HEPH (ENSVVUG00000022741)
Canis_lupus	DUPLICATION
Canis_lupus	ANCESTRAL SPECIES																	ENSGT00390000014084.w #22
Dingo	MODERN SPECIES	277	SMARCA5 (ENSCAFG00020025641)	NFYB (ENSCAFG00020025633) #7	HCFC2 (ENSCAFG00020025622) #8	ENSCAFG00020025617 #10	GLT8D2 (ENSCAFG00020025612) #9	UQCC6 (ENSCAFG00020025608) #11	HSP90B1 (ENSCAFG00020024947) #12	NT5DC3 (ENSCAFG00020024802) #13	STAB2 (ENSCAFG00020024644) #14	ASCL1 (ENSCAFG00020024624) #16	PAH (ENSCAFG00020024619) #17	IGF1 (ENSCAFG00020024614) #18	PMCH (ENSCAFG00020024612) #19	PARPBP (ENSCAFG00020024611) #20	NUP37 (ENSCAFG00020024609) #21	ENSCAFG00020024608 #22	ENSCAFG00020024606	DRAM1 (ENSCAFG00020024605) #23	GNPTAB (ENSCAFG00020024471) #24	SYCP3 (ENSCAFG00020024465) #25	CHPT1 (ENSCAFG00020024435) #26	MYBPC1 (ENSCAFG00020024354) #27	SPIC (ENSCAFG00020024334) #28	ARL1 (ENSCAFG00020024333) #29	UTP20 (ENSCAFG00020024305) #30	SLC5A8 (ENSCAFG00020024296) #31	ENSCAFG00020024291	ANO4 (ENSCAFG00020024282) #32	GAS2L3 (ENSCAFG00020024280) #34	ENSCAFG00020024277	NR1H4 (ENSCAFG00020024269) #35
Canis_lupus	DUPLICATION
Canis_lupus	ANCESTRAL SPECIES	19	ENSGT00940000163050	ENSGT00940000164787	ENSGT00390000000306	ENSGT00940000158708.b	ENSGT00940000158487	ENSGT00940000159270	ENSGT00550000074827	ENSGT00390000011314	ENSGT00940000157796	ENSGT00390000016928	ENSGT00950000183159.a	ENSGT00940000159958	ENSGT00390000011368	ENSGT00390000008346	ENSGT00390000014963	ENSGT00390000014084.x.a #22	ENSGT00940000161360	ENSGT00940000157110	ENSGT00940000159219	ENSGT00940000161041.p	ENSGT00940000153168.C.a.b	ENSGT00550000074940	ENSGT00390000014316.c.a	ENSGT01050000247111	ENSGT00940000160193	ENSGT00940000157266	ENSGT00390000012178.h	ENSGT00940000159024	ENSGT00940000154713.B	ENSGT00390000018121	ENSGT00940000156728
Dog	MODERN SPECIES	4	ZNF252 (ENSCAFG00845012460)	ENSCAFG00845012514	ENSCAFG00845012622	CHRNB4 (ENSCAFG00845012797)	CHRNA3 (ENSCAFG00845012908)	CHRNA5 (ENSCAFG00845013065)	ENSCAFG00845013139	HYKK (ENSCAFG00845013245)	IREB2 (ENSCAFG00845013296)	ENSCAFG00845013420	LIMCH1 (ENSCAFG00845013654)	ENSCAFG00845014079	TMEM33 (ENSCAFG00845014117)	SLC30A9 (ENSCAFG00845014338)	BEND4 (ENSCAFG00845014543)	ENSCAFG00845014573 #22	SHISA3 (ENSCAFG00845014597)	ATP8A1 (ENSCAFG00845014721)	GRXCR1 (ENSCAFG00845015179)	KCTD8 (ENSCAFG00845015280)	ENSCAFG00845015310	YIPF7 (ENSCAFG00845015334)	GUF1 (ENSCAFG00845015394)	GNPDA2 (ENSCAFG00845015497)	ENSCAFG00845015556	GABRG1 (ENSCAFG00845015632)	GABRA2 (ENSCAFG00845015709)	COX7B2 (ENSCAFG00845008375)	GABRA4 (ENSCAFG00845008486)	ENSCAFG00845008573	COMMD8 (ENSCAFG00845008641)
Dingo	MODERN SPECIES	88	ZNF250 (ENSCAFG00020021041)	ZNF16 (ENSCAFG00020021044)	ENSCAFG00020021046	C8orf33 (ENSCAFG00020021047)	CHRNB4 (ENSCAFG00020021049)	CHRNA3 (ENSCAFG00020021051)	CHRNA5 (ENSCAFG00020021054)	ENSCAFG00020021060	HYKK (ENSCAFG00020021063)	IREB2 (ENSCAFG00020021072)	WFS1 (ENSCAFG00020021379)	LIMCH1 (ENSCAFG00020021385)	PHOX2B (ENSCAFG00020021393)	TMEM33 (ENSCAFG00020021399)	SLC30A9 (ENSCAFG00020021444)	ENSCAFG00020021961 #22	SHISA3 (ENSCAFG00020021965)	ENSCAFG00020021971	ENSCAFG00020021985	GRXCR1 (ENSCAFG00020021991)
Canis_lupus	ANCESTRAL SPECIES	16	ENSGT00940000156733	ENSGT00940000154917 #7	ENSGT00940000160733 #8	ENSGT00940000158078 #9	ENSGT00390000000987 #10	ENSGT00390000007685 #11	ENSGT01020000230401.b.a #12	ENSGT00940000158637 #13	ENSGT00940000156566 #14	ENSGT00940000162483 #16	ENSGT00950000182885.B #17	ENSGT00940000159081 #18	ENSGT00390000004984 #19	ENSGT00390000006088 #20	ENSGT00390000010777 #21	ENSGT00390000014084.x.b #22	ENSGT01030000234578.B.a #23	ENSGT00390000006747 #24	ENSGT00390000000062.x.a #25	ENSGT00950000183117.a.a #26	ENSGT00940000158254 #27	ENSGT00940000155067.a #28	ENSGT00940000155118.o #29	ENSGT00390000016813 #30	ENSGT00940000155166.A #31	ENSGT00530000063516.a.a.c.a	ENSGT00940000158600 #32	ENSGT00940000159389 #34	ENSGT00940000154037.B.ab	ENSGT00940000158037 #35	ENSGT00940000158187 #36
Dog	MODERN SPECIES	6	NFYB (ENSCAFG00845011102) #7	HCFC2 (ENSCAFG00845010878) #8	GLT8D2 (ENSCAFG00845010772) #9	TDG (ENSCAFG00845010683) #10	UQCC6 (ENSCAFG00845010622) #11	HSP90B1 (ENSCAFG00845010421) #12	ENSCAFG00845010352	NT5DC3 (ENSCAFG00845010184) #13	STAB2 (ENSCAFG00845009872) #14	ASCL1 (ENSCAFG00845009710) #16	PAH (ENSCAFG00845009553) #17	IGF1 (ENSCAFG00845009366) #18	PMCH (ENSCAFG00845009246) #19	PARPBP (ENSCAFG00845009146) #20	NUP37 (ENSCAFG00845008993) #21	WASHC3 (ENSCAFG00845008957) #22	ENSCAFG00845008937	DRAM1 (ENSCAFG00845008892) #23	GNPTAB (ENSCAFG00845008537) #24	CHPT1 (ENSCAFG00845008274) #26	MYBPC1 (ENSCAFG00845007866) #27	SPIC (ENSCAFG00845007650) #28	ARL1 (ENSCAFG00845007593) #29	UTP20 (ENSCAFG00845007280) #30	SLC5A8 (ENSCAFG00845007150) #31	ENSCAFG00845007104	ANO4 (ENSCAFG00845006701) #32	GAS2L3 (ENSCAFG00845006511) #34	ENSCAFG00845006472	NR1H4 (ENSCAFG00845006398) #35	SLC17A8 (ENSCAFG00845006328) #36
Laurasiatheria_c	ANCESTRAL SPECIES	5	ENSGT00940000160733 #8	ENSGT00940000158078 #9	ENSGT00390000000987 #10	ENSGT00390000007685 #11	ENSGT01020000230401.b.a #12	ENSGT00530000064216	ENSGT00940000158637 #13	ENSGT00940000156566 #14	ENSGT00390000015477 #15	ENSGT00940000162483 #16	ENSGT00950000182885.B #17	ENSGT00940000159081 #18	ENSGT00390000004984 #19	ENSGT00390000006088 #20	ENSGT00390000010777 #21	ENSGT00390000014084 #22	ENSGT01030000234578.B.a #23	ENSGT00390000006747 #24	ENSGT00390000000062.x.a #25	ENSGT00950000183117.a.a #26	ENSGT00940000158254 #27	ENSGT00940000155067.a #28	ENSGT00940000155118.o #29	ENSGT00390000016813 #30	ENSGT00940000155166.A #31	ENSGT00940000158600 #32	ENSGT00940000159389 #34	ENSGT00940000158037 #35	ENSGT00940000158187 #36	ENSGT00880000138031 #37	ENSGT00950000182976.a.a
Equus	ANCESTRAL SPECIES	21	ENSGT00940000154917 #7	ENSGT00940000160733 #8	ENSGT00940000158078 #9	ENSGT00390000000987 #10	ENSGT00390000007685 #11	ENSGT01020000230401.b.a #12	ENSGT00940000158637 #13	ENSGT00940000156566 #14	ENSGT00390000015477 #15	ENSGT00940000162483 #16	ENSGT00950000182885.B #17	ENSGT00940000159081 #18	ENSGT00390000004984 #19	ENSGT00390000006088 #20	ENSGT00390000010777 #21	ENSGT00390000014084 #22	ENSGT01030000234578.B.a #23	ENSGT00390000006747.j #24	ENSGT00390000000062.x.a #25	ENSGT00950000183117.a.a #26	ENSGT00940000158254 #27	ENSGT00940000155067.a.s #28	ENSGT00940000155118.o #29	ENSGT00390000016813 #30	ENSGT00940000155166.A #31	ENSGT00940000158600 #32	ENSGT00940000159389 #34	ENSGT00940000158037 #35	ENSGT00940000158187 #36	ENSGT00880000138031 #37	ENSGT00950000182976.a.a
Horse	MODERN SPECIES	20	GLT8D2 (ENSECAG00000014675) #9	TDG (ENSECAG00000002072) #10	UQCC6 (ENSECAG00000001215) #11	HSP90B1 (ENSECAG00000010610) #12	NT5DC3 (ENSECAG00000018145) #13	STAB2 (ENSECAG00000014647) #14	ENSECAG00000045656	C28H12orf42 (ENSECAG00000013099) #15	PAH (ENSECAG00000019047) #17	ASCL1 (ENSECAG00000036896) #16	ENSECAG00000058780	IGF1 (ENSECAG00000010109) #18	PMCH (ENSECAG00000005866) #19	PARPBP (ENSECAG00000016646) #20	NUP37 (ENSECAG00000015319) #21	WASHC3 (ENSECAG00000013045) #22	DRAM1 (ENSECAG00000008759) #23	GNPTAB (ENSECAG00000010682) #24	SYCP3 (ENSECAG00000023735) #25	CHPT1 (ENSECAG00000019000) #26	ENSECAG00000048628	MYBPC1 (ENSECAG00000008625) #27	ENSECAG00000009614 #28	ARL1 (ENSECAG00000000372) #29	UTP20 (ENSECAG00000006876) #30	SLC5A8 (ENSECAG00000013230) #31	ANO4 (ENSECAG00000013480) #32	GAS2L3 (ENSECAG00000010371) #34	NR1H4 (ENSECAG00000018166) #35	SLC17A8 (ENSECAG00000013826) #36	SCYL2 (ENSECAG00000022066) #37
Donkey	MODERN SPECIES	11	NFYB (ENSEASG00005020840) #7	HCFC2 (ENSEASG00005020832) #8	GLT8D2 (ENSEASG00005020826) #9	TDG (ENSEASG00005020816) #10	UQCC6 (ENSEASG00005035605) #11	HSP90B1 (ENSEASG00005020806) #12	NT5DC3 (ENSEASG00005020426) #13	STAB2 (ENSEASG00005020233) #14	C12orf42 (ENSEASG00005020173) #15	ASCL1 (ENSEASG00005020171) #16	PAH (ENSEASG00005020163) #17	IGF1 (ENSEASG00005024734) #18	PMCH (ENSEASG00005020150) #19	PARPBP (ENSEASG00005036248) #20	NUP37 (ENSEASG00005020141) #21	WASHC3 (ENSEASG00005020138) #22	ENSEASG00005020130 #23	ENSEASG00005027099 #24	ENSEASG00005020118 #24	SYCP3 (ENSEASG00005020115) #25	CHPT1 (ENSEASG00005020112) #26	MYBPC1 (ENSEASG00005020089) #27	SPIC (ENSEASG00005038574) #28	ARL1 (ENSEASG00005020057) #29	UTP20 (ENSEASG00005019981) #30	SLC5A8 (ENSEASG00005019961) #31	ANO4 (ENSEASG00005019948) #32	GAS2L3 (ENSEASG00005033350) #34	NR1H4 (ENSEASG00005019928) #35	SLC17A8 (ENSEASG00005019921) #36	SCYL2 (ENSEASG00005019917) #37
Chiroptera	ANCESTRAL SPECIES	23	ENSGT00940000160733 #8	ENSGT00940000158078 #9	ENSGT00390000000987 #10	ENSGT00390000007685 #11	ENSGT01020000230401.b.a #12	ENSGT00530000064216	ENSGT00940000158637 #13	ENSGT00940000156566 #14	ENSGT00390000015477 #15	ENSGT00940000162483 #16	ENSGT00950000182885.B #17	ENSGT00940000159081 #18	ENSGT00390000004984 #19	ENSGT00390000006088 #20	ENSGT00390000010777 #21	ENSGT00390000014084 #22	ENSGT01030000234578.B.a #23	ENSGT00390000006747 #24	ENSGT00390000000062.x.a #25	ENSGT00950000183117.a.a #26	ENSGT00940000158254 #27	ENSGT00940000155067.a #28	ENSGT00940000155118.o #29	ENSGT00390000016813 #30	ENSGT00940000155166.A #31	ENSGT00940000158600 #32	ENSGT00940000159389 #34	ENSGT00940000158037 #35	ENSGT00940000158187 #36	ENSGT00880000138031 #37	ENSGT00950000182976.a.a
Megabat	MODERN SPECIES	229												IGF1 (ENSPVAG00000005393) #18	PMCH (ENSPVAG00000005392) #19	PARPBP (ENSPVAG00000005389) #20	NUP37 (ENSPVAG00000005387) #21	WASHC3 (ENSPVAG00000005384) #22
Microchiroptera	ANCESTRAL SPECIES	8	ENSGT00940000154917 #7	ENSGT00940000160733 #8	ENSGT00940000158078 #9	ENSGT00390000000987 #10	ENSGT00390000007685 #11	ENSGT01020000230401.b.a #12	ENSGT00940000158637 #13	ENSGT00940000156566 #14	ENSGT00390000015477 #15	ENSGT00940000162483 #16	ENSGT00950000182885.B #17	ENSGT00940000159081 #18	ENSGT00390000004984 #19	ENSGT00390000006088 #20	ENSGT00390000010777 #21	ENSGT00390000014084 #22	ENSGT01030000234578.B.a #23	ENSGT00390000006747 #24	ENSGT00390000000062.x.a #25	ENSGT00950000183117.a.a #26	ENSGT00940000158254 #27	ENSGT00940000155067.a #28	ENSGT00940000155118.o #29	ENSGT00390000016813 #30	ENSGT00940000155166.A #31	ENSGT00940000158600 #32	ENSGT00940000159389 #34	ENSGT00940000158037 #35	ENSGT00940000158187 #36	ENSGT00880000138031 #37	ENSGT00950000182976.a.a
Microbat	MODERN SPECIES	947	CHST11 (ENSMLUG00000001989)	TXNRD1 (ENSMLUG00000005307)	NFYB (ENSMLUG00000005468) #7	HCFC2 (ENSMLUG00000005459) #8	GLT8D2 (ENSMLUG00000000372) #9	TDG (ENSMLUG00000000369) #10	UQCC6 (ENSMLUG00000004829) #11	HSP90B1 (ENSMLUG00000000360) #12	NT5DC3 (ENSMLUG00000000354) #13	STAB2 (ENSMLUG00000000335) #14	PAH (ENSMLUG00000005341) #17	IGF1 (ENSMLUG00000011331) #18	PMCH (ENSMLUG00000000414) #19	PARPBP (ENSMLUG00000000408) #20	NUP37 (ENSMLUG00000000405) #21	WASHC3 (ENSMLUG00000000401) #22	DRAM1 (ENSMLUG00000000393) #23	GNPTAB (ENSMLUG00000000385) #24	SYCP3 (ENSMLUG00000010711) #25	CHPT1 (ENSMLUG00000010695) #26	MYBPC1 (ENSMLUG00000010644) #27	SPIC (ENSMLUG00000011052) #28	ENSMLUG00000002351 #29	UTP20 (ENSMLUG00000002313) #30	SLC5A8 (ENSMLUG00000013581) #31	ANO4 (ENSMLUG00000013562) #32	GAS2L3 (ENSMLUG00000004905) #34	NR1H4 (ENSMLUG00000009273) #35	SLC17A8 (ENSMLUG00000009254) #36	SCYL2 (ENSMLUG00000009220) #37	ENSMLUG00000009190
Greater horseshoe bat	MODERN SPECIES	1	NFYB (ENSRFEG00010011624) #7	HCFC2 (ENSRFEG00010011667) #8	GLT8D2 (ENSRFEG00010011697) #9	TDG (ENSRFEG00010011842) #10	ENSRFEG00010012047 #11	HSP90B1 (ENSRFEG00010012074) #12	NT5DC3 (ENSRFEG00010012146) #13	STAB2 (ENSRFEG00010012191) #14	ENSRFEG00010012232 #15	ASCL1 (ENSRFEG00010012263) #16	PAH (ENSRFEG00010012310) #17	IGF1 (ENSRFEG00010012713) #18	PMCH (ENSRFEG00010012821) #19	PARPBP (ENSRFEG00010012859) #20	NUP37 (ENSRFEG00010013013) #21	WASHC3 (ENSRFEG00010013087) #22	DRAM1 (ENSRFEG00010013161) #23	GNPTAB (ENSRFEG00010013250) #24	SYCP3 (ENSRFEG00010013361) #25	CHPT1 (ENSRFEG00010013493) #26	MYBPC1 (ENSRFEG00010013747) #27	ENSRFEG00010015420 #28	ARL1 (ENSRFEG00010015513) #29	UTP20 (ENSRFEG00010015715) #30	SLC5A8 (ENSRFEG00010015766) #31	ANO4 (ENSRFEG00010016021) #32	GAS2L3 (ENSRFEG00010016827) #34	NR1H4 (ENSRFEG00010016901) #35	SLC17A8 (ENSRFEG00010017004) #36	SCYL2 (ENSRFEG00010017358) #37	ACTR6 (ENSRFEG00010017580)
Artiodactyla	ANCESTRAL SPECIES	6	ENSGT00940000160733 #8	ENSGT00940000158078 #9	ENSGT00390000000987 #10	ENSGT00390000007685 #11	ENSGT01020000230401.b.a #12	ENSGT00530000064216	ENSGT00940000158637 #13	ENSGT00940000156566 #14	ENSGT00390000015477 #15	ENSGT00940000162483 #16	ENSGT00950000182885.B #17	ENSGT00940000159081 #18	ENSGT00390000004984 #19	ENSGT00390000006088 #20	ENSGT00390000010777 #21	ENSGT00390000014084 #22	ENSGT01030000234578.B.a #23	ENSGT00390000006747 #24	ENSGT00390000000062.x.a #25	ENSGT00950000183117.a.a #26	ENSGT00940000158254 #27	ENSGT00940000155067.a #28	ENSGT00940000155118.o #29	ENSGT00390000016813 #30	ENSGT00940000155166.A #31	ENSGT00940000158600 #32	ENSGT00940000159389 #34	ENSGT00940000158037 #35	ENSGT00940000158187 #36	ENSGT00880000138031 #37	ENSGT00950000182976.a.a
Suina	ANCESTRAL SPECIES	4	ENSGT00940000160180	ENSGT00940000154917 #7	ENSGT00940000160733 #8	ENSGT00940000158078 #9	ENSGT00390000000987 #10	ENSGT00390000007685 #11	ENSGT01020000230401.b.a #12	ENSGT00940000158637 #13	ENSGT00940000156566 #14	ENSGT00940000162483 #16	ENSGT00950000182885.B #17	ENSGT00940000159081 #18	ENSGT00390000004984 #19	ENSGT00390000006088 #20	ENSGT00390000010777 #21	ENSGT00390000014084 #22	ENSGT01030000234578.B.a #23	ENSGT00390000006747 #24	ENSGT00390000000062.x.a #25	ENSGT00950000183117.a.a #26	ENSGT00940000158254 #27	ENSGT00940000155067.a #28	ENSGT00940000155118.o #29	ENSGT00390000016813 #30	ENSGT00940000155166.A #31	ENSGT00940000158600 #32	ENSGT00940000159389 #34	ENSGT00940000158037 #35	ENSGT00940000158187 #36	ENSGT00880000138031 #37	ENSGT00720000108833
Pig	MODERN SPECIES	13	NFYB (ENSSSCG00000000844) #7	HCFC2 (ENSSSCG00000000846) #8	GLT8D2 (ENSSSCG00000000848) #9	TDG (ENSSSCG00000000847) #10	UQCC6 (ENSSSCG00000056928) #11	HSP90B1 (ENSSSCG00000000849) #12	NT5DC3 (ENSSSCG00000000853) #13	ENSSSCG00000000854 #14	ASCL1 (ENSSSCG00000060761) #16	PAH (ENSSSCG00000000856) #17	ENSSSCG00000046391	IGF1 (ENSSSCG00000000857) #18	PMCH (ENSSSCG00000000858) #19	PARPBP (ENSSSCG00000000859) #20	NUP37 (ENSSSCG00000000860) #21	WASHC3 (ENSSSCG00000036075) #22	DRAM1 (ENSSSCG00000023972) #23	GNPTAB (ENSSSCG00000000862) #24	SYCP3 (ENSSSCG00000000863) #25	CHPT1 (ENSSSCG00000000864) #26	MYBPC1 (ENSSSCG00000000866) #27	ENSSSCG00000054653	SPIC (ENSSSCG00000000867) #28	ARL1 (ENSSSCG00000000870) #29	UTP20 (ENSSSCG00000000869) #30	ENSSSCG00000047368	SLC5A8 (ENSSSCG00000000871) #31	ANO4 (ENSSSCG00000000873) #32	GAS2L3 (ENSSSCG00000000874) #34	NR1H4 (ENSSSCG00000000875) #35	SLC17A8 (ENSSSCG00000038946) #36
Chacoan peccary	MODERN SPECIES	873	TXNRD1 (ENSCWAG00000021371)	NFYB (ENSCWAG00000021350) #7	HCFC2 (ENSCWAG00000021331) #8	GLT8D2 (ENSCWAG00000021321) #9	TDG (ENSCWAG00000021314) #10	UQCC6 (ENSCWAG00000021302) #11	HSP90B1 (ENSCWAG00000021294) #12	NT5DC3 (ENSCWAG00000021281) #13	STAB2 (ENSCWAG00000021215) #14	ASCL1 (ENSCWAG00000021192) #16	PAH (ENSCWAG00000021172) #17	IGF1 (ENSCWAG00000021142) #18	PMCH (ENSCWAG00000021118) #19	PARPBP (ENSCWAG00000021097) #20	NUP37 (ENSCWAG00000021079) #21	WASHC3 (ENSCWAG00000021060) #22	DRAM1 (ENSCWAG00000021049) #23	ENSCWAG00000021041	GNPTAB (ENSCWAG00000020989) #24	SYCP3 (ENSCWAG00000020953) #25	CHPT1 (ENSCWAG00000020929) #26	MYBPC1 (ENSCWAG00000020041) #27	SPIC (ENSCWAG00000019944) #28	ARL1 (ENSCWAG00000019875) #29	UTP20 (ENSCWAG00000019835) #30	SLC5A8 (ENSCWAG00000019771) #31	ANO4 (ENSCWAG00000019430) #32	ENSCWAG00000019369 #34	ENSCWAG00000019350 #34	NR1H4 (ENSCWAG00000019166) #35	SLC17A8 (ENSCWAG00000019025) #36
Artiodactyla_a	ANCESTRAL SPECIES	5	ENSGT00940000160733 #8	ENSGT00940000158078 #9	ENSGT00390000000987 #10	ENSGT00390000007685 #11	ENSGT01020000230401.b.a #12	ENSGT00530000064216	ENSGT00940000158637 #13	ENSGT00940000156566 #14	ENSGT00390000015477 #15	ENSGT00940000162483 #16	ENSGT00950000182885.B #17	ENSGT00940000159081 #18	ENSGT00390000004984 #19	ENSGT00390000006088 #20	ENSGT00390000010777 #21	ENSGT00390000014084 #22	ENSGT01030000234578.B.a #23	ENSGT00390000006747 #24	ENSGT00390000000062.x.a #25	ENSGT00950000183117.a.a #26	ENSGT00940000158254 #27	ENSGT00940000155067.a #28	ENSGT00940000155118.o #29	ENSGT00390000016813 #30	ENSGT00940000155166.A #31	ENSGT00940000158600 #32	ENSGT00940000159389 #34	ENSGT00940000158037 #35	ENSGT00940000158187 #36	ENSGT00880000138031 #37	ENSGT00950000182976.a.a
Camelidae	ANCESTRAL SPECIES	39	ENSGT00940000154917 #7	ENSGT00940000160733 #8	ENSGT00940000158078 #9	ENSGT00390000000987 #10	ENSGT00390000007685 #11	ENSGT01020000230401.b.a #12	ENSGT00940000158637 #13	ENSGT00940000156566 #14	ENSGT00390000015477 #15	ENSGT00940000162483 #16	ENSGT00950000182885.B #17	ENSGT00940000159081 #18	ENSGT00390000004984 #19	ENSGT00390000006088 #20	ENSGT00390000010777 #21	ENSGT00390000014084 #22	ENSGT01030000234578.B.a #23	ENSGT00390000006747 #24	ENSGT00390000000062.x.a #25	ENSGT00950000183117.a.a #26	ENSGT00940000158254 #27	ENSGT00940000155067.a #28	ENSGT00940000155118.o #29	ENSGT00390000016813 #30	ENSGT00940000155166.A #31	ENSGT00940000158600 #32	ENSGT00940000159389 #34	ENSGT00940000158037 #35	ENSGT00940000158187 #36	ENSGT00880000138031 #37	ENSGT00950000182976.a.a
Alpaca	MODERN SPECIES	587									C12orf42 (ENSVPAG00000002019) #15	ASCL1 (ENSVPAG00000002018) #16	PAH (ENSVPAG00000002017) #17	IGF1 (ENSVPAG00000002016) #18	PMCH (ENSVPAG00000002015) #19	PARPBP (ENSVPAG00000002014) #20	NUP37 (ENSVPAG00000002012) #21	WASHC3 (ENSVPAG00000002010) #22	DRAM1 (ENSVPAG00000002009) #23
Arabian camel	MODERN SPECIES	3	TXNRD1 (ENSCDRG00005018895)	NFYB (ENSCDRG00005019339) #7	HCFC2 (ENSCDRG00005019365) #8	GLT8D2 (ENSCDRG00005006622) #9	TDG (ENSCDRG00005006704) #10	UQCC6 (ENSCDRG00005006903) #11	HSP90B1 (ENSCDRG00005006969) #12	NT5DC3 (ENSCDRG00005007213) #13	STAB2 (ENSCDRG00005007424) #14	ASCL1 (ENSCDRG00005009930) #16	PAH (ENSCDRG00005009962) #17	IGF1 (ENSCDRG00005010126) #18	PMCH (ENSCDRG00005010289) #19	PARPBP (ENSCDRG00005010342) #20	NUP37 (ENSCDRG00005010536) #21	WASHC3 (ENSCDRG00005010638) #22	ENSCDRG00005010766 #23	GNPTAB (ENSCDRG00005010913) #24	SYCP3 (ENSCDRG00005011273) #25	CHPT1 (ENSCDRG00005011388) #26	MYBPC1 (ENSCDRG00005011702) #27	SPIC (ENSCDRG00005015956) #28	ENSCDRG00005015976	ARL1 (ENSCDRG00005015998) #29	UTP20 (ENSCDRG00005016150) #30	SLC5A8 (ENSCDRG00005016273) #31	ANO4 (ENSCDRG00005016441) #32	GAS2L3 (ENSCDRG00005016924) #34	NR1H4 (ENSCDRG00005017007) #35	SLC17A8 (ENSCDRG00005017191) #36	SCYL2 (ENSCDRG00005017362) #37
Artiodactyla_b	ANCESTRAL SPECIES	5	ENSGT00940000160733 #8	ENSGT00940000158078 #9	ENSGT00390000000987 #10	ENSGT00390000007685 #11	ENSGT01020000230401.b.a #12	ENSGT00530000064216	ENSGT00940000158637 #13	ENSGT00940000156566 #14	ENSGT00390000015477 #15	ENSGT00940000162483 #16	ENSGT00950000182885.B #17	ENSGT00940000159081 #18	ENSGT00390000004984 #19	ENSGT00390000006088 #20	ENSGT00390000010777 #21	ENSGT00390000014084 #22	ENSGT01030000234578.B.a #23	ENSGT00390000006747 #24	ENSGT00390000000062.x.a #25	ENSGT00950000183117.a.a #26	ENSGT00940000158254 #27	ENSGT00940000155067.a #28	ENSGT00940000155118.o #29	ENSGT00390000016813 #30	ENSGT00940000155166.A #31	ENSGT00940000158600 #32	ENSGT00940000159389 #34	ENSGT00940000158037 #35	ENSGT00940000158187 #36	ENSGT00880000138031 #37	ENSGT00950000182976.a.a
Pecora	DUPLICATION
Pecora	DUPLICATION
Pecora	ANCESTRAL SPECIES	212															ENSGT00950000182869.e.b.b	ENSGT00390000014084.y.a #22
Percora_a	ANCESTRAL SPECIES	210															ENSGT00950000182869.e.b.b	ENSGT00390000014084.y.a #22
Siberian musk deer	MODERN SPECIES	70														ENSMMSG00000001439	ENSMMSG00000001428	ENSMMSG00000001411 #22	ENSMMSG00000001242	CARMIL3 (ENSMMSG00000001109)	CPNE6 (ENSMMSG00000001051)	NRL (ENSMMSG00000001028)	PCK2 (ENSMMSG00000000916)	DCAF11 (ENSMMSG00000000775)	FITM1 (ENSMMSG00000000752)	PSME1 (ENSMMSG00000000601)	EMC9 (ENSMMSG00000000563)	PSME2 (ENSMMSG00000000469)	RNF31 (ENSMMSG00000000363)	IRF9 (ENSMMSG00000000329)	REC8 (ENSMMSG00000000291)	IPO4 (ENSMMSG00000000208)	TM9SF1 (ENSMMSG00000000168)
Yarkand deer	MODERN SPECIES	3	PABPN1 (ENSCHYG00000014202)	SLC22A17 (ENSCHYG00000013916)	EFS (ENSCHYG00000013648)	IL25 (ENSCHYG00000013553)	ENSCHYG00000013291	ENSCHYG00000013203	MYH7 (ENSCHYG00000012682)	NGDN (ENSCHYG00000012516)	ZFHX2 (ENSCHYG00000012435)	THTPA (ENSCHYG00000012365)	AP1G2 (ENSCHYG00000012260)	JPH4 (ENSCHYG00000012168)	ENSCHYG00000012150	ENSCHYG00000012105	ENSCHYG00000012084	ENSCHYG00000012053 #22	ENSCHYG00000012023	ENSCHYG00000011583	CARMIL3 (ENSCHYG00000011429)	CPNE6 (ENSCHYG00000011191)	NRL (ENSCHYG00000011152)	PCK2 (ENSCHYG00000010885)	DCAF11 (ENSCHYG00000010574)	FITM1 (ENSCHYG00000010518)	PSME1 (ENSCHYG00000010154)	EMC9 (ENSCHYG00000010055)	ENSCHYG00000009594	RNF31 (ENSCHYG00000009118)	REC8 (ENSCHYG00000008911)	IPO4 (ENSCHYG00000008496)	TM9SF1 (ENSCHYG00000008403)
Pecora	ANCESTRAL SPECIES																	ENSGT00390000014084.y.b #22
Yarkand deer	MODERN SPECIES	14	GLT8D2 (ENSCHYG00000005230) #9	TDG (ENSCHYG00000005191) #10	UQCC6 (ENSCHYG00000005155) #11	HSP90B1 (ENSCHYG00000005129) #12	ENSCHYG00000005088	NT5DC3 (ENSCHYG00000026709) #13	STAB2 (ENSCHYG00000026488) #14	ASCL1 (ENSCHYG00000026408) #16	PAH (ENSCHYG00000026322) #17	IGF1 (ENSCHYG00000026263) #18	ENSCHYG00000026246	PMCH (ENSCHYG00000026232) #19	PARPBP (ENSCHYG00000026202) #20	NUP37 (ENSCHYG00000026177) #21	ENSCHYG00000026168	ENSCHYG00000026143 #22	DRAM1 (ENSCHYG00000026106) #23	GNPTAB (ENSCHYG00000026007) #24	SYCP3 (ENSCHYG00000025959) #25	CHPT1 (ENSCHYG00000025883) #26	MYBPC1 (ENSCHYG00000024823) #27	SPIC (ENSCHYG00000024724) #28	ARL1 (ENSCHYG00000024652) #29	UTP20 (ENSCHYG00000024333) #30	SLC5A8 (ENSCHYG00000024213) #31	ANO4 (ENSCHYG00000023758) #32	GAS2L3 (ENSCHYG00000023599) #34	NR1H4 (ENSCHYG00000023219) #35	SLC17A8 (ENSCHYG00000023010) #36	SCYL2 (ENSCHYG00000022642) #37	ACTR6 (ENSCHYG00000022511)
Pecora	ANCESTRAL SPECIES	3	ENSGT00940000154917 #7	ENSGT00940000160733 #8	ENSGT00940000158078 #9	ENSGT00390000000987 #10	ENSGT00390000007685 #11	ENSGT01020000230401.b.a #12	ENSGT00530000064216	ENSGT00940000158637 #13	ENSGT00940000156566 #14	ENSGT00940000162483 #16	ENSGT00950000182885.B #17	ENSGT00940000159081 #18	ENSGT00390000004984 #19	ENSGT00390000006088 #20	ENSGT00390000010777 #21	ENSGT00390000014084.z #22	ENSGT01030000234578.B.a #23	ENSGT00390000006747 #24	ENSGT00390000000062.x.a #25	ENSGT00950000183117.a.a #26	ENSGT00940000158254 #27	ENSGT00940000155067.a #28	ENSGT00940000155118.o #29	ENSGT00390000016813 #30	ENSGT00940000155166.A #31	ENSGT00940000158600 #32	ENSGT00940000159389 #34	ENSGT00940000158037 #35	ENSGT00940000158187 #36	ENSGT00880000138031 #37	ENSGT00720000108833
Yarkand deer	DUPLICATION
Yarkand deer	MODERN SPECIES	17	ENSCHYG00000023782	ENSCHYG00000023802	ENSCHYG00000023828	ENSCHYG00000023879	ENSCHYG00000023925	ENSCHYG00000024254	SREK1 (ENSCHYG00000024292)	ENSCHYG00000024408	ENSCHYG00000024736	ENSCHYG00000024802	ENSCHYG00000024828	ENSCHYG00000024869	ENSCHYG00000024899	ENSCHYG00000024957	ENSCHYG00000024984	ENSCHYG00000025063 #22	ENSCHYG00000025082	ENSCHYG00000025186	ENSCHYG00000025327	ENSCHYG00000025347	ENSCHYG00000025367	ENSCHYG00000025391	HTR1A (ENSCHYG00000025432)	ENSCHYG00000025458	ENSCHYG00000025526	ENSCHYG00000025617	ENSCHYG00000025645	ENSCHYG00000025738	ENSCHYG00000025792	ENSCHYG00000025809	ENSCHYG00000025829
Yarkand deer	MODERN SPECIES	17	CENPH (ENSCHYG00000020280)	ENSCHYG00000020416	SLC30A5 (ENSCHYG00000020535)	PIK3R1 (ENSCHYG00000020787)	ENSCHYG00000021145	ENSCHYG00000021279	ENSCHYG00000022220	ENSCHYG00000022256	ENSCHYG00000022367	ENSCHYG00000022997	ENSCHYG00000023048	ENSCHYG00000023085	ENSCHYG00000023178	ENSCHYG00000023243	ENSCHYG00000023287	ENSCHYG00000023345 #22	ENSCHYG00000023379	ENSCHYG00000023616	ENSCHYG00000023742	ENSCHYG00000023782	ENSCHYG00000023802	ENSCHYG00000023828	ENSCHYG00000023879	ENSCHYG00000023925	ENSCHYG00000024254	SREK1 (ENSCHYG00000024292)	ENSCHYG00000024408	ENSCHYG00000024736	ENSCHYG00000024802	ENSCHYG00000024828	ENSCHYG00000024869
Percora_a	ANCESTRAL SPECIES	3	ENSGT00940000160733 #8	ENSGT00940000158078 #9	ENSGT00390000000987 #10	ENSGT00390000007685 #11	ENSGT01020000230401.b.a #12	ENSGT00530000064216	ENSGT00940000158637 #13	ENSGT00940000156566 #14	ENSGT00940000162483 #16	ENSGT00950000182885.B #17	ENSGT00940000159081 #18	ENSGT00960000189116	ENSGT00390000004984 #19	ENSGT00390000006088 #20	ENSGT00390000010777 #21	ENSGT00390000014084.z #22	ENSGT01030000234578.B.a #23	ENSGT00390000006747 #24	ENSGT00390000000062.x.a #25	ENSGT00950000183117.a.a #26	ENSGT00940000158254 #27	ENSGT00940000155067.a #28	ENSGT00940000155118.o #29	ENSGT00390000016813 #30	ENSGT00940000155166.A #31	ENSGT00940000158600 #32	ENSGT00940000159389 #34	ENSGT00940000158037 #35	ENSGT00940000158187 #36	ENSGT00880000138031 #37	ENSGT00720000108833
Siberian musk deer	MODERN SPECIES	1256									ASCL1 (ENSMMSG00000022409) #16	ENSMMSG00000022417 #17	IGF1 (ENSMMSG00000022450) #18	ENSMMSG00000022495	PMCH (ENSMMSG00000022503) #19	PARPBP (ENSMMSG00000022517) #20	NUP37 (ENSMMSG00000022571) #21	ENSMMSG00000022596 #22	DRAM1 (ENSMMSG00000022616) #23	GNPTAB (ENSMMSG00000022661) #24	SYCP3 (ENSMMSG00000022696) #25	CHPT1 (ENSMMSG00000022713) #26	MYBPC1 (ENSMMSG00000022857) #27	SPIC (ENSMMSG00000023308) #28	ENSMMSG00000023322 #29	UTP20 (ENSMMSG00000023336) #30	SLC5A8 (ENSMMSG00000023355) #31	ANO4 (ENSMMSG00000023384) #32	GAS2L3 (ENSMMSG00000023454) #34	NR1H4 (ENSMMSG00000023473) #35	SLC17A8 (ENSMMSG00000023518) #36	SCYL2 (ENSMMSG00000023538) #37	ACTR6 (ENSMMSG00000023566)
Bovidae	ANCESTRAL SPECIES	3	ENSGT00940000158078 #9	ENSGT00390000000987 #10	ENSGT00390000007685 #11	ENSGT01020000230401.b.a #12	ENSGT00530000064216	ENSGT00940000158637 #13	ENSGT00940000156566 #14	ENSGT00940000162483 #16	ENSGT00950000182885.B #17	ENSGT00940000159081 #18	ENSGT00960000189116	ENSGT00390000004984 #19	ENSGT00390000006088 #20	ENSGT00550000074935.z	ENSGT00390000010777 #21	ENSGT00390000014084.z #22	ENSGT01030000234578.B.a #23	ENSGT00390000006747 #24	ENSGT00390000000062.x.a #25	ENSGT00950000183117.a.a #26	ENSGT00940000158254 #27	ENSGT00940000155067.a #28	ENSGT00940000155118.o #29	ENSGT00390000016813 #30	ENSGT00940000155166.A #31	ENSGT00940000158600 #32	ENSGT00940000159389 #34	ENSGT00940000158037 #35	ENSGT00940000158187 #36	ENSGT00880000138031 #37	ENSGT00720000108833
Bovinae	ANCESTRAL SPECIES	10	ENSGT00940000158078 #9	ENSGT00390000000987 #10	ENSGT00390000007685 #11	ENSGT01020000230401.b.a #12	ENSGT00530000064216	ENSGT00940000158637 #13	ENSGT00940000156566 #14	ENSGT00940000162483 #16	ENSGT00950000182885.B #17	ENSGT00940000159081 #18	ENSGT00960000189116	ENSGT00390000004984 #19	ENSGT00390000006088 #20	ENSGT00390000010777 #21	ENSGT00550000074935.z	ENSGT00390000014084.z #22	ENSGT00870000136537.j	ENSGT01030000234578.B.a #23	ENSGT00390000006747 #24	ENSGT00390000000062.x.a #25	ENSGT00950000183117.a.a #26	ENSGT00940000158254 #27	ENSGT00940000155067.a #28	ENSGT00940000154612.m.a.c	ENSGT00940000155118.o #29	ENSGT00390000016813 #30	ENSGT00940000155166.A #31	ENSGT00940000158600 #32	ENSGT00940000159389 #34	ENSGT00940000158037 #35	ENSGT00940000158187 #36
Bos	ANCESTRAL SPECIES	2	ENSGT00940000158078 #9	ENSGT00390000000987 #10	ENSGT00390000007685 #11	ENSGT01020000230401.b.a #12	ENSGT00530000064216	ENSGT00940000158637 #13	ENSGT00940000156566 #14	ENSGT00940000162483 #16	ENSGT00950000182885.B #17	ENSGT00940000159081 #18	ENSGT00960000189116	ENSGT00390000004984.d #19	ENSGT00390000006088 #20	ENSGT00390000010777 #21	ENSGT00550000074935.z	ENSGT00390000014084.z #22	ENSGT00870000136537.j	ENSGT01030000234578.B.a #23	ENSGT00390000006747 #24	ENSGT00390000000062.x.a #25	ENSGT00950000183117.a.a #26	ENSGT00940000158254 #27	ENSGT00940000155067.a #28	ENSGT00940000154612.m.a.c	ENSGT00940000155118.o #29	ENSGT00390000016813 #30	ENSGT00940000155166.A #31	ENSGT00940000158600.d #32	ENSGT00940000159389 #34	ENSGT00940000158037 #35	ENSGT00940000158187 #36
Bos_a	ANCESTRAL SPECIES	3	ENSGT00940000158078 #9	ENSGT00390000000987 #10	ENSGT00390000007685 #11	ENSGT01020000230401.b.a #12	ENSGT00530000064216	ENSGT00940000158637 #13	ENSGT00940000156566 #14	ENSGT00940000162483 #16	ENSGT00950000182885.B #17	ENSGT00940000159081 #18	ENSGT00960000189116	ENSGT00390000004984.d #19	ENSGT00390000006088 #20	ENSGT00390000010777 #21	ENSGT00550000074935.z	ENSGT00390000014084.z #22	ENSGT00870000136537.j	ENSGT01030000234578.B.a #23	ENSGT00390000006747 #24	ENSGT00390000000062.x.a #25	ENSGT00950000183117.a.a #26	ENSGT00940000158254 #27	ENSGT00940000155067.a #28	ENSGT00940000154612.m.a.c	ENSGT00940000155118.o #29	ENSGT00390000016813 #30	ENSGT00940000155166.A #31	ENSGT00940000158600.d #32	ENSGT00940000159389 #34	ENSGT00940000158037 #35	ENSGT00940000158187 #36
Wild yak	MODERN SPECIES	1023									PAH (ENSBMUG00000009991) #17	IGF1 (ENSBMUG00000009930) #18	ENSBMUG00000009885	PMCH (ENSBMUG00000009881) #19	PARPBP (ENSBMUG00000009860) #20	ENSBMUG00000009814	NUP37 (ENSBMUG00000009802) #21	WASHC3 (ENSBMUG00000009774) #22	ENSBMUG00000009753	DRAM1 (ENSBMUG00000009731) #23	GNPTAB (ENSBMUG00000009686) #24	SYCP3 (ENSBMUG00000009634) #25	CHPT1 (ENSBMUG00000009579) #26	MYBPC1 (ENSBMUG00000009435) #27	ENSBMUG00000009206 #28	ENSBMUG00000009199	ARL1 (ENSBMUG00000009188) #29	UTP20 (ENSBMUG00000009150) #30	SLC5A8 (ENSBMUG00000009096) #31
Domestic yak	MODERN SPECIES	24	UQCC6 (ENSBGRG00000020001) #11	HSP90B1 (ENSBGRG00000020036) #12	ENSBGRG00000020117	NT5DC3 (ENSBGRG00000020334) #13	STAB2 (ENSBGRG00000020546) #14	ENSBGRG00000021065	ENSBGRG00000021085 #16	ENSBGRG00000021133 #16	PAH (ENSBGRG00000021190) #17	IGF1 (ENSBGRG00000000290) #18	ENSBGRG00000000346	PMCH (ENSBGRG00000000355) #19	PARPBP (ENSBGRG00000000381) #20	NUP37 (ENSBGRG00000000415) #21	ENSBGRG00000000441	WASHC3 (ENSBGRG00000000463) #22	ENSBGRG00000000545	DRAM1 (ENSBGRG00000000571) #23	GNPTAB (ENSBGRG00000000629) #24	SYCP3 (ENSBGRG00000000767) #25	CHPT1 (ENSBGRG00000000795) #26	MYBPC1 (ENSBGRG00000001036) #27	ENSBGRG00000002632 #28	ENSBGRG00000002653	ARL1 (ENSBGRG00000002671) #29	UTP20 (ENSBGRG00000002781) #30	SLC5A8 (ENSBGRG00000002819) #31	ANO4 (ENSBGRG00000002904) #32	GAS2L3 (ENSBGRG00000003088) #34	NR1H4 (ENSBGRG00000003123) #35	ENSBGRG00000003155
Bos_b	ANCESTRAL SPECIES	22	ENSGT00940000158078 #9	ENSGT00390000000987 #10	ENSGT00390000007685 #11	ENSGT01020000230401.b.a #12	ENSGT00530000064216	ENSGT00940000158637 #13	ENSGT00940000156566 #14	ENSGT00940000162483 #16	ENSGT00950000182885.B #17	ENSGT00940000159081 #18	ENSGT00960000189116	ENSGT00390000004984.d #19	ENSGT00390000006088 #20	ENSGT00390000010777 #21	ENSGT00550000074935.z	ENSGT00390000014084.z #22	ENSGT00870000136537.j	ENSGT01030000234578.B.a #23	ENSGT00390000006747 #24	ENSGT00390000000062.x.a #25	ENSGT00950000183117.a.a #26	ENSGT00940000158254 #27	ENSGT00940000155067.a #28	ENSGT00940000154612.m.a.c	ENSGT00940000155118.o #29	ENSGT00390000016813 #30	ENSGT00940000155166.A #31	ENSGT00940000158600.d #32	ENSGT00940000159389 #34	ENSGT00940000158037 #35	ENSGT00940000158187 #36
Hybrid Bos Indicus	MODERN SPECIES	24	GLT8D2 (ENSBIXG00005007306) #9	TDG (ENSBIXG00005021462) #10	UQCC6 (ENSBIXG00005021438) #11	HSP90B1 (ENSBIXG00005021407) #12	ENSBIXG00005021359	NT5DC3 (ENSBIXG00005021303) #13	STAB2 (ENSBIXG00005021254) #14	ASCL1 (ENSBIXG00005021003) #16	PAH (ENSBIXG00005007158) #17	IGF1 (ENSBIXG00005007345) #18	ENSBIXG00005020545	ENSBIXG00005020521 #19	PARPBP (ENSBIXG00005020483) #20	NUP37 (ENSBIXG00005003453) #21	ENSBIXG00005020399	WASHC3 (ENSBIXG00005020384) #22	ENSBIXG00005003426	DRAM1 (ENSBIXG00005020313) #23	GNPTAB (ENSBIXG00005020278) #24	ENSBIXG00005020255	SYCP3 (ENSBIXG00005003378) #25	CHPT1 (ENSBIXG00005020232) #26	MYBPC1 (ENSBIXG00005020157) #27	ENSBIXG00005019949	SPIC (ENSBIXG00005019938) #28	ENSBIXG00005003254	ARL1 (ENSBIXG00005019884) #29	UTP20 (ENSBIXG00005003225) #30	ENSBIXG00005019697	SLC5A8 (ENSBIXG00005019682) #31	ENSBIXG00005019628
Cow	MODERN SPECIES	24	GLT8D2 (ENSBTAG00000000925) #9	TDG (ENSBTAG00000021633) #10	UQCC6 (ENSBTAG00000048280) #11	HSP90B1 (ENSBTAG00000003362) #12	TTC41 (ENSBTAG00000027899)	NT5DC3 (ENSBTAG00000006013) #13	STAB2 (ENSBTAG00000006010) #14	ASCL1 (ENSBTAG00000016227) #16	PAH (ENSBTAG00000012794) #17	ENSBTAG00000049055	IGF1 (ENSBTAG00000011082) #18	ENSBTAG00000051413	PMCH (ENSBTAG00000013008) #19	PARPBP (ENSBTAG00000039709) #20	NUP37 (ENSBTAG00000000022) #21	WASHC3 (ENSBTAG00000000021) #22	ENSBTAG00000012793	DRAM1 (ENSBTAG00000017287) #23	GNPTAB (ENSBTAG00000019409) #24	SYCP3 (ENSBTAG00000002492) #25	CHPT1 (ENSBTAG00000002490) #26	ENSBTAG00000048643	MYBPC1 (ENSBTAG00000011392) #27	SPIC (ENSBTAG00000009904) #28	ENSBTAG00000008020	ARL1 (ENSBTAG00000011883) #29	UTP20 (ENSBTAG00000003239) #30	SLC5A8 (ENSBTAG00000011525) #31	ANO4 (ENSBTAG00000004145) #32	GAS2L3 (ENSBTAG00000049308) #34	NR1H4 (ENSBTAG00000013596) #35
American bison	MODERN SPECIES	3241	GLT8D2 (ENSBBBG00000004019) #9	TDG (ENSBBBG00000016156) #10	UQCC6 (ENSBBBG00000016141) #11	HSP90B1 (ENSBBBG00000016125) #12	ENSBBBG00000016093	NT5DC3 (ENSBBBG00000016072) #13	STAB2 (ENSBBBG00000003988) #14	ASCL1 (ENSBBBG00000003978) #16	PAH (ENSBBBG00000015967) #17	IGF1 (ENSBBBG00000015932) #18	ENSBBBG00000015861	PMCH (ENSBBBG00000015856) #19	PARPBP (ENSBBBG00000003942) #20	NUP37 (ENSBBBG00000015803) #21	ENSBBBG00000015783	WASHC3 (ENSBBBG00000015771) #22	ENSBBBG00000015751	DRAM1 (ENSBBBG00000015747) #23	GNPTAB (ENSBBBG00000015731) #24	SYCP3 (ENSBBBG00000002637) #25	CHPT1 (ENSBBBG00000015683) #26	MYBPC1 (ENSBBBG00000015658) #27	SPIC (ENSBBBG00000015354) #28	ENSBBBG00000003821	ARL1 (ENSBBBG00000015342) #29	UTP20 (ENSBBBG00000001252) #30	SLC5A8 (ENSBBBG00000001338) #31	ANO4 (ENSBBBG00000001376) #32
Caprinae	ANCESTRAL SPECIES		ENSGT00940000160733 #8	ENSGT00940000158078 #9	ENSGT00390000000987 #10	ENSGT00390000007685 #11	ENSGT01020000230401.b.a #12	ENSGT00530000064216	ENSGT00940000158637 #13	ENSGT00940000156566 #14	ENSGT00940000162483 #16	ENSGT00950000182885.B #17	ENSGT00940000159081 #18	ENSGT00390000004984 #19	ENSGT00390000006088 #20	ENSGT00550000074935.z	ENSGT00390000010777 #21	ENSGT00390000014084.z #22	ENSGT01030000234578.B.a #23	ENSGT00390000006747 #24	ENSGT00390000000062.x.a #25	ENSGT00950000183117.a.a #26	ENSGT00940000158254 #27	ENSGT00940000155067.a #28	ENSGT00940000155118.o #29	ENSGT00390000016813 #30	ENSGT00940000155166.A #31	ENSGT00940000158600 #32	ENSGT00940000159389 #34	ENSGT00940000158037 #35	ENSGT00940000158187 #36	ENSGT00880000138031 #37	ENSGT00720000108833
Goat	MODERN SPECIES	24	GLT8D2 (ENSCHIG00000025962) #9	TDG (ENSCHIG00000015426) #10	UQCC6 (ENSCHIG00000022542) #11	HSP90B1 (ENSCHIG00000009693) #12	ENSCHIG00000018363	NT5DC3 (ENSCHIG00000025486) #13	STAB2 (ENSCHIG00000026881) #14	ASCL1 (ENSCHIG00000013292) #16	PAH (ENSCHIG00000018129) #17	IGF1 (ENSCHIG00000018863) #18	ENSCHIG00000010135	PMCH (ENSCHIG00000015954) #19	PARPBP (ENSCHIG00000023012) #20	ENSCHIG00000024987	NUP37 (ENSCHIG00000014565) #21	WASHC3 (ENSCHIG00000025652) #22	DRAM1 (ENSCHIG00000019601) #23	GNPTAB (ENSCHIG00000024196) #24	SYCP3 (ENSCHIG00000026071) #25	CHPT1 (ENSCHIG00000009936) #26	MYBPC1 (ENSCHIG00000026869) #27	ENSCHIG00000026862 #28	ENSCHIG00000007713	ARL1 (ENSCHIG00000024524) #29	UTP20 (ENSCHIG00000009221) #30	SLC5A8 (ENSCHIG00000012962) #31	ANO4 (ENSCHIG00000011611) #32	GAS2L3 (ENSCHIG00000015539) #34	NR1H4 (ENSCHIG00000020981) #35	SLC17A8 (ENSCHIG00000016996) #36	SCYL2 (ENSCHIG00000022321) #37
Rambouillet Sheep	MODERN SPECIES	19	HCFC2 (ENSOARG00020013130) #8	GLT8D2 (ENSOARG00020013012) #9	TDG (ENSOARG00020012922) #10	C12orf73 (ENSOARG00020012868) #11	HSP90B1 (ENSOARG00020012684) #12	ENSOARG00020012446	NT5DC3 (ENSOARG00020012234) #13	STAB2 (ENSOARG00020010949) #14	ASCL1 (ENSOARG00020010725) #16	ENSOARG00020010707	PAH (ENSOARG00020010456) #17	IGF1 (ENSOARG00020009650) #18	PMCH (ENSOARG00020009581) #19	PARPBP (ENSOARG00020009495) #20	NUP37 (ENSOARG00020009419) #21	WASHC3 (ENSOARG00020009382) #22	DRAM1 (ENSOARG00020009316) #23	GNPTAB (ENSOARG00020008629) #24	SYCP3 (ENSOARG00020008561) #25	MYBPC1 (ENSOARG00020006228) #27	SPIC (ENSOARG00020006153) #28	ARL1 (ENSOARG00020006041) #29	UTP20 (ENSOARG00020005594) #30	SLC5A8 (ENSOARG00020005486) #31	ANO4 (ENSOARG00020005350) #32	ENSOARG00020005299 #34	NR1H4 (ENSOARG00020005198) #35	SLC17A8 (ENSOARG00020005092) #36	ENSOARG00020014449	SCYL2 (ENSOARG00020014106) #37	ACTR6 (ENSOARG00020013903)
Cetacea	ANCESTRAL SPECIES	8	ENSGT00940000160733 #8	ENSGT00940000158078 #9	ENSGT00390000000987 #10	ENSGT00390000007685 #11	ENSGT01020000230401.b.a #12	ENSGT00530000064216	ENSGT00940000158637 #13	ENSGT00940000156566 #14	ENSGT00390000015477 #15	ENSGT00940000162483 #16	ENSGT00950000182885.B #17	ENSGT00940000159081 #18	ENSGT00390000004984 #19	ENSGT00390000006088 #20	ENSGT00390000010777 #21	ENSGT00390000014084 #22	ENSGT01030000234578.B.a #23	ENSGT00390000006747 #24	ENSGT00390000000062.x.a #25	ENSGT00950000183117.a.a #26	ENSGT00940000158254 #27	ENSGT00900000143486	ENSGT00390000016813 #30	ENSGT00940000155166.A #31	ENSGT00940000158600 #32	ENSGT00940000159389 #34	ENSGT00940000158037 #35	ENSGT00940000158187 #36	ENSGT00880000138031 #37	ENSGT00950000182976.a.a	ENSGT00720000108833
Odontoceti	DUPLICATION
Odontoceti	ANCESTRAL SPECIES																	ENSGT00390000014084.`b #22
Odontoceti_a	ANCESTRAL SPECIES																	ENSGT00390000014084.`b #22
Odontoceti_b	ANCESTRAL SPECIES	7	ENSGT00940000158078 #9	ENSGT00390000000987.i #10	ENSGT00390000007685.g #11	ENSGT01020000230401.b.a #12	ENSGT00940000158637 #13	ENSGT00940000156566 #14	ENSGT00950000182869.e.b.a	ENSGT00390000015477 #15	ENSGT00940000162483 #16	ENSGT00950000182885.B #17	ENSGT00940000159081 #18	ENSGT00390000004984 #19	ENSGT00390000006088 #20	ENSGT00940000161020.b	ENSGT00390000010777 #21	ENSGT00390000014084.`b #22	ENSGT01030000234578.B.a #23	ENSGT00390000006747 #24	ENSGT00390000000062.x.a #25	ENSGT00950000183117.a.a #26	ENSGT00940000158254 #27	ENSGT00940000155067.a #28	ENSGT00940000155118.o.b #29	ENSGT00390000016813 #30	ENSGT00940000155166.A #31	ENSGT00940000158600 #32	ENSGT00940000159389 #34	ENSGT00940000158037 #35	ENSGT00940000158187 #36	ENSGT00880000138031 #37	ENSGT00720000108833
Monodontidae	ANCESTRAL SPECIES																	ENSGT00390000014084.`b #22
Beluga whale	MODERN SPECIES	45	GLT8D2 (ENSDLEG00000014912) #9	ENSDLEG00000014784 #10	ENSDLEG00000014761	HSP90B1 (ENSDLEG00000014736) #12	NT5DC3 (ENSDLEG00000014492) #13	STAB2 (ENSDLEG00000013770) #14	ENSDLEG00000013729	ENSDLEG00000013724 #15	ASCL1 (ENSDLEG00000013714) #16	PAH (ENSDLEG00000012903) #17	IGF1 (ENSDLEG00000012825) #18	PMCH (ENSDLEG00000012806) #19	ENSDLEG00000012799	PARPBP (ENSDLEG00000012735) #20	NUP37 (ENSDLEG00000012705) #21	ENSDLEG00000012694 #22	ENSDLEG00000012682 #23	GNPTAB (ENSDLEG00000012595) #24	SYCP3 (ENSDLEG00000012574) #25	CHPT1 (ENSDLEG00000012562) #26	MYBPC1 (ENSDLEG00000012290) #27	SPIC (ENSDLEG00000012245) #28	ENSDLEG00000012234 #29	UTP20 (ENSDLEG00000012184) #30	SLC5A8 (ENSDLEG00000012140) #31	ANO4 (ENSDLEG00000012044) #32	GAS2L3 (ENSDLEG00000012028) #34	NR1H4 (ENSDLEG00000011975) #35	SLC17A8 (ENSDLEG00000011936) #36	SCYL2 (ENSDLEG00000011872) #37	ACTR6 (ENSDLEG00000011851)
Vaquita	MODERN SPECIES	1	GLT8D2 (ENSPSNG00000004727) #9	TDG (ENSPSNG00000004761) #10	ENSPSNG00000004787 #11	HSP90B1 (ENSPSNG00000004805) #12	NT5DC3 (ENSPSNG00000004840) #13	STAB2 (ENSPSNG00000005090) #14	ENSPSNG00000005787	ENSPSNG00000005812 #15	ASCL1 (ENSPSNG00000005837) #16	PAH (ENSPSNG00000005868) #17	IGF1 (ENSPSNG00000005988) #18	PARPBP (ENSPSNG00000006060) #20	PMCH (ENSPSNG00000006104) #19	ENSPSNG00000006123	NUP37 (ENSPSNG00000006146) #21	WASHC3 (ENSPSNG00000006187) #22	DRAM1 (ENSPSNG00000006230) #23	GNPTAB (ENSPSNG00000006375) #24	SYCP3 (ENSPSNG00000006499) #25	CHPT1 (ENSPSNG00000006536) #26	MYBPC1 (ENSPSNG00000006793) #27	SPIC (ENSPSNG00000007910) #28	ARL1 (ENSPSNG00000008015) #29	UTP20 (ENSPSNG00000008109) #30	SLC5A8 (ENSPSNG00000008157) #31	ANO4 (ENSPSNG00000008341) #32	GAS2L3 (ENSPSNG00000008665) #34	NR1H4 (ENSPSNG00000008748) #35	SLC17A8 (ENSPSNG00000008979) #36	SCYL2 (ENSPSNG00000009144) #37	ACTR6 (ENSPSNG00000009262)
Odontoceti	DUPLICATION
Odontoceti	ANCESTRAL SPECIES	7	ENSGT00940000160733 #8	ENSGT00940000158078 #9	ENSGT00390000000987 #10	ENSGT00390000007685 #11	ENSGT01020000230401.b.a #12	ENSGT00530000064216	ENSGT00940000158637 #13	ENSGT00940000156566 #14	ENSGT00390000015477 #15	ENSGT00940000162483 #16	ENSGT00950000182885.B #17	ENSGT00940000159081 #18	ENSGT00390000004984 #19	ENSGT00390000006088 #20	ENSGT00390000010777 #21	ENSGT00390000014084.ab.a #22	ENSGT01030000234578.B.a #23	ENSGT00390000006747 #24	ENSGT00390000000062.x.a #25	ENSGT00950000183117.a.a #26	ENSGT00940000158254 #27	ENSGT00940000155067.a #28	ENSGT00940000155118.o.b #29	ENSGT00390000016813 #30	ENSGT00940000155166.A #31	ENSGT00940000158600 #32	ENSGT00940000159389 #34	ENSGT00940000158037 #35	ENSGT00940000158187 #36	ENSGT00880000138031 #37	ENSGT00950000182976.a.a
Sperm whale	MODERN SPECIES	17	HCFC2 (ENSPCTG00005018737) #8	GLT8D2 (ENSPCTG00005018709) #9	TDG (ENSPCTG00005018640) #10	ENSPCTG00005018623	C6H12orf73 (ENSPCTG00005018570) #11	HSP90B1 (ENSPCTG00005018513) #12	NT5DC3 (ENSPCTG00005017736) #13	STAB2 (ENSPCTG00005017013) #14	ENSPCTG00005016886 #15	ASCL1 (ENSPCTG00005016858) #16	PAH (ENSPCTG00005016692) #17	IGF1 (ENSPCTG00005016550) #18	PMCH (ENSPCTG00005016493) #19	PARPBP (ENSPCTG00005016310) #20	NUP37 (ENSPCTG00005016255) #21	WASHC3 (ENSPCTG00005016226) #22	DRAM1 (ENSPCTG00005016159) #23	GNPTAB (ENSPCTG00005016010) #24	SYCP3 (ENSPCTG00005015907) #25	CHPT1 (ENSPCTG00005015686) #26	MYBPC1 (ENSPCTG00005013500) #27	ENSPCTG00005013365	SPIC (ENSPCTG00005013283) #28	ARL1 (ENSPCTG00005012979) #29	UTP20 (ENSPCTG00005012384) #30	SLC5A8 (ENSPCTG00005012208) #31	ANO4 (ENSPCTG00005011868) #32	GAS2L3 (ENSPCTG00005011766) #34	NR1H4 (ENSPCTG00005011367) #35	SLC17A8 (ENSPCTG00005011129) #36	SCYL2 (ENSPCTG00005011005) #37
Odontoceti_a	ANCESTRAL SPECIES	6	ENSGT00940000160733 #8	ENSGT00940000158078 #9	ENSGT00390000000987.i #10	ENSGT00390000007685 #11	ENSGT01020000230401.b.a #12	ENSGT00530000064216	ENSGT00940000158637 #13	ENSGT00940000156566 #14	ENSGT00390000015477 #15	ENSGT00940000162483 #16	ENSGT00950000182885.B #17	ENSGT00940000159081 #18	ENSGT00390000004984 #19	ENSGT00390000006088 #20	ENSGT00390000010777 #21	ENSGT00390000014084.ab.a #22	ENSGT01030000234578.B.a #23	ENSGT00390000006747 #24	ENSGT00390000000062.x.a #25	ENSGT00950000183117.a.a #26	ENSGT00940000158254 #27	ENSGT00940000155067.a #28	ENSGT00940000155118.o.b #29	ENSGT00390000016813 #30	ENSGT00940000155166.A #31	ENSGT00940000158600 #32	ENSGT00940000159389 #34	ENSGT00940000158037 #35	ENSGT00940000158187 #36	ENSGT00880000138031 #37	ENSGT00720000108833
Dolphin	MODERN SPECIES	1069												IGF1 (ENSTTRG00000017227) #18	PMCH (ENSTTRG00000017226) #19	PARPBP (ENSTTRG00000017224) #20	NUP37 (ENSTTRG00000017223) #21	WASHC3 (ENSTTRG00000017221) #22	DRAM1 (ENSTTRG00000017217) #23	ENSTTRG00000017214 #24	SYCP3 (ENSTTRG00000017212) #25	CHPT1 (ENSTTRG00000017210) #26	MYBPC1 (ENSTTRG00000017206) #27	SPIC (ENSTTRG00000017205) #28	ARL1 (ENSTTRG00000017202) #29	UTP20 (ENSTTRG00000017195) #30	SLC5A8 (ENSTTRG00000017193) #31	ANO4 (ENSTTRG00000017188) #32
Odontoceti_b	ANCESTRAL SPECIES																	ENSGT00390000014084.ab.a #22
Monodontidae	ANCESTRAL SPECIES	6	ENSGT00940000158078 #9	ENSGT00390000000987.i #10	ENSGT00390000007685.g #11	ENSGT01020000230401.b.a #12	ENSGT00940000158637 #13	ENSGT00940000156566 #14	ENSGT00950000182869.e.b.a	ENSGT00390000015477 #15	ENSGT00940000162483 #16	ENSGT00950000182885.B #17	ENSGT00940000159081 #18	ENSGT00390000004984 #19	ENSGT00390000006088 #20	ENSGT00940000161020.b	ENSGT00390000010777 #21	ENSGT00390000014084.ab.a #22	ENSGT01030000234578.B.a #23	ENSGT00390000006747 #24	ENSGT00390000000062.x.a #25	ENSGT00950000183117.a.a #26	ENSGT00940000158254 #27	ENSGT00940000155067.a #28	ENSGT00940000155118.o.a.b #29	ENSGT00390000016813 #30	ENSGT00940000155166.A #31	ENSGT00940000158600 #32	ENSGT00940000159389 #34	ENSGT00940000158037 #35	ENSGT00940000158187 #36	ENSGT00880000138031 #37	ENSGT00720000108833
Narwhal	MODERN SPECIES	313	GLT8D2 (ENSMMNG00015015751) #9	TDG (ENSMMNG00015015705) #10	ENSMMNG00015015687 #11	HSP90B1 (ENSMMNG00015015649) #12	NT5DC3 (ENSMMNG00015015619) #13	STAB2 (ENSMMNG00015015569) #14	ENSMMNG00015015545	ENSMMNG00015015537 #15	ASCL1 (ENSMMNG00015015527) #16	PAH (ENSMMNG00015015502) #17	IGF1 (ENSMMNG00015015455) #18	PMCH (ENSMMNG00015015430) #19	ENSMMNG00015015421	PARPBP (ENSMMNG00015015398) #20	NUP37 (ENSMMNG00015015365) #21	ENSMMNG00015015348 #22	DRAM1 (ENSMMNG00015015327) #23	GNPTAB (ENSMMNG00015015244) #24	SYCP3 (ENSMMNG00015015206) #25	CHPT1 (ENSMMNG00015015187) #26	MYBPC1 (ENSMMNG00015014938) #27	SPIC (ENSMMNG00015014772) #28	ENSMMNG00015014764	UTP20 (ENSMMNG00015014730) #30	SLC5A8 (ENSMMNG00015014687) #31	ANO4 (ENSMMNG00015014593) #32	GAS2L3 (ENSMMNG00015014544) #34	NR1H4 (ENSMMNG00015014507) #35	SLC17A8 (ENSMMNG00015014449) #36	SCYL2 (ENSMMNG00015014414) #37	ACTR6 (ENSMMNG00015014364)
Odontoceti	ANCESTRAL SPECIES																	ENSGT00390000014084.ab.b #22
Odontoceti_a	ANCESTRAL SPECIES																	ENSGT00390000014084.ab.b #22
Odontoceti_b	ANCESTRAL SPECIES																	ENSGT00390000014084.ab.b #22
Monodontidae	DUPLICATION
Monodontidae	ANCESTRAL SPECIES	14	ENSGT01030000234610.b.a.b.a	ENSGT01030000234610.b.a.b.b	ENSGT00940000156696.B	ENSGT00940000157732	ENSGT00390000000909	ENSGT00940000156184	ENSGT00940000161242	ENSGT00390000018550	ENSGT00530000064714	ENSGT00940000155351	ENSGT00940000162030	ENSGT01050000244827.D.b.b	ENSGT00530000063534.b	ENSGT01030000234563.b.a.b.b.b	ENSGT00390000004029.k.b	ENSGT00390000014084.ab.b.a #22	ENSGT01030000234563.b.a.b.b.a	ENSGT00940000157716	ENSGT00940000155257	ENSGT00940000155809	ENSGT00940000153352.B	ENSGT00940000159529	ENSGT00580000081628	ENSGT01030000234642.a.a	ENSGT00390000015948.b	ENSGT00390000009265	ENSGT00940000156270	ENSGT00940000161451	ENSGT00520000055570.A.a	ENSGT00940000159064	ENSGT00940000163069
Beluga whale	MODERN SPECIES	65	CALHM1 (ENSDLEG00000009015)	CALHM3 (ENSDLEG00000008972)	NEURL1 (ENSDLEG00000008927)	SH3PXD2A (ENSDLEG00000008838)	STN1 (ENSDLEG00000013196)	SLK (ENSDLEG00000013132)	COL17A1 (ENSDLEG00000012764)	SFR1 (ENSDLEG00000012724)	CFAP43 (ENSDLEG00000012588)	GSTO1 (ENSDLEG00000012569)	GSTO2 (ENSDLEG00000012561)	ITPRIP (ENSDLEG00000012555)	CFAP58 (ENSDLEG00000012529)	SORCS3 (ENSDLEG00000012501)	ENSDLEG00000012496	ENSDLEG00000012486 #22	SORCS1 (ENSDLEG00000012351)	XPNPEP1 (ENSDLEG00000012315)	ADD3 (ENSDLEG00000012191)	MXI1 (ENSDLEG00000012169)	SMNDC1 (ENSDLEG00000012161)	DUSP5 (ENSDLEG00000012151)	SMC3 (ENSDLEG00000012099)	RBM20 (ENSDLEG00000012068)	PDCD4 (ENSDLEG00000012038)	BBIP1 (ENSDLEG00000012035)	SHOC2 (ENSDLEG00000012024)	ADRA2A (ENSDLEG00000012016)	ENSDLEG00000012003	GPAM (ENSDLEG00000011917)	TECTB (ENSDLEG00000011838)
Narwhal	MODERN SPECIES	311	CALHM1 (ENSMMNG00015013618)	CALHM3 (ENSMMNG00015013638)	NEURL1 (ENSMMNG00015013659)	SH3PXD2A (ENSMMNG00015013681)	STN1 (ENSMMNG00015013736)	SLK (ENSMMNG00015013837)	COL17A1 (ENSMMNG00015013979)	SFR1 (ENSMMNG00015014153)	CFAP43 (ENSMMNG00015014169)	GSTO1 (ENSMMNG00015014192)	GSTO2 (ENSMMNG00015014209)	ITPRIP (ENSMMNG00015014222)	CFAP58 (ENSMMNG00015014243)	SORCS3 (ENSMMNG00015014281)	ENSMMNG00015014339	ENSMMNG00015014354 #22	SORCS1 (ENSMMNG00015014476)	XPNPEP1 (ENSMMNG00015014877)	ADD3 (ENSMMNG00015014969)	MXI1 (ENSMMNG00015015016)	SMNDC1 (ENSMMNG00015015060)	DUSP5 (ENSMMNG00015015082)	SMC3 (ENSMMNG00015015103)	RBM20 (ENSMMNG00015015146)	PDCD4 (ENSMMNG00015015177)	BBIP1 (ENSMMNG00015015209)	SHOC2 (ENSMMNG00015015226)	ADRA2A (ENSMMNG00015015255)	GPAM (ENSMMNG00015015279)	TECTB (ENSMMNG00015015316)	ENSMMNG00015015345
Monodontidae	ANCESTRAL SPECIES		ENSGT01070000253744.a.a.b.a	ENSGT00940000160023	ENSGT00950000182995.e.a.b	ENSGT00390000006225.d	ENSGT00550000076338	ENSGT01030000234623.a.a.b	ENSGT01030000236649	ENSGT00940000155104.q.b	ENSGT00510000047363	ENSGT00940000155058	ENSGT00940000159949	ENSGT00940000158079	ENSGT00940000160209.f	ENSGT00940000153446.a.b	ENSGT00940000159638	ENSGT00390000014084.ab.b.b #22	ENSGT00940000157151	ENSGT00940000156592	ENSGT00940000156213	ENSGT00530000063698.b	ENSGT00940000157833	ENSGT00940000157669	ENSGT00940000156761	ENSGT00410000025596.a.b	ENSGT00390000002144.e.a	ENSGT00940000162094	ENSGT00940000156139	ENSGT00940000155543	ENSGT00940000157582.c	ENSGT00390000010888.c.a.b	ENSGT00390000003312
Narwhal	MODERN SPECIES	304	HCRTR1 (ENSMMNG00015011382)	TINAGL1 (ENSMMNG00015011411)	ENSMMNG00015011437	ENSMMNG00015011457	SERINC2 (ENSMMNG00015011481)	ENSMMNG00015011517	ENSMMNG00015011537	FABP3 (ENSMMNG00015011554)	ZCCHC17 (ENSMMNG00015011615)	SNRNP40 (ENSMMNG00015011699)	NKAIN1 (ENSMMNG00015011715)	PUM1 (ENSMMNG00015011776)	SDC3 (ENSMMNG00015011885)	LAPTM5 (ENSMMNG00015011902)	MATN1 (ENSMMNG00015011923)	ENSMMNG00015011944 #22	PTPRU (ENSMMNG00015011976)	MECR (ENSMMNG00015012012)	SRSF4 (ENSMMNG00015012035)	TMEM200B (ENSMMNG00015012047)	EPB41 (ENSMMNG00015012190)	OPRD1 (ENSMMNG00015012577)	YTHDF2 (ENSMMNG00015012587)	GMEB1 (ENSMMNG00015012601)	ENSMMNG00015012619	RAB42 (ENSMMNG00015012631)	TRNAU1AP (ENSMMNG00015012660)	RCC1 (ENSMMNG00015012687)	PHACTR4 (ENSMMNG00015012730)	ENSMMNG00015012774	MED18 (ENSMMNG00015012782)
Beluga whale	MODERN SPECIES	51																ENSDLEG00000008516 #22	PTPRU (ENSDLEG00000009121)	MECR (ENSDLEG00000012578)	SRSF4 (ENSDLEG00000012596)	TMEM200B (ENSDLEG00000012611)	EPB41 (ENSDLEG00000012645)	OPRD1 (ENSDLEG00000012901)	YTHDF2 (ENSDLEG00000012942)	GMEB1 (ENSDLEG00000012947)	TAF12 (ENSDLEG00000012969)	RAB42 (ENSDLEG00000012981)	ENSDLEG00000013017	ENSDLEG00000013043	RCC1 (ENSDLEG00000013058)	PHACTR4 (ENSDLEG00000013189)	ENSDLEG00000013302
Blue whale	DUPLICATION
Blue whale	MODERN SPECIES	2	MAGI1 (ENSBMSG00010016192)	SLC25A26 (ENSBMSG00010018085)	LRIG1 (ENSBMSG00010018168)	KBTBD8 (ENSBMSG00010018360)	SUCLG2 (ENSBMSG00010018400)	TAFA1 (ENSBMSG00010018438)	TAFA4 (ENSBMSG00010018478)	EOGT (ENSBMSG00010018516)	TMF1 (ENSBMSG00010018575)	UBA3 (ENSBMSG00010018750)	ARL6IP5 (ENSBMSG00010019130)	LMOD3 (ENSBMSG00010019153)	FRMD4B (ENSBMSG00010019228)	ENSBMSG00010019343	ENSBMSG00010019371	ENSBMSG00010019391 #22	MITF (ENSBMSG00010019612)	MDFIC2 (ENSBMSG00010020784)	ENSBMSG00010020804	FOXP1 (ENSBMSG00010021028)	EIF4E3 (ENSBMSG00010021929)	GPR27 (ENSBMSG00010021933)	PROK2 (ENSBMSG00010021941)	RYBP (ENSBMSG00010021945)	ENSBMSG00010021950	SHQ1 (ENSBMSG00010021956)	GXYLT2 (ENSBMSG00010021967)	PPP4R2 (ENSBMSG00010021970)	PDZRN3 (ENSBMSG00010021981)	ENSBMSG00010021985	ENSBMSG00010021989
Blue whale	MODERN SPECIES	1	HCFC2 (ENSBMSG00010007426) #8	GLT8D2 (ENSBMSG00010007404) #9	TDG (ENSBMSG00010007381) #10	UQCC6 (ENSBMSG00010007373) #11	HSP90B1 (ENSBMSG00010007331) #12	NT5DC3 (ENSBMSG00010007305) #13	STAB2 (ENSBMSG00010007242) #14	ENSBMSG00010007218	ENSBMSG00010007206 #15	ASCL1 (ENSBMSG00010007196) #16	PAH (ENSBMSG00010007171) #17	IGF1 (ENSBMSG00010007135) #18	PMCH (ENSBMSG00010007116) #19	PARPBP (ENSBMSG00010007079) #20	NUP37 (ENSBMSG00010007053) #21	ENSBMSG00010007037 #22	ENSBMSG00010007029	ENSBMSG00010007014	ENSBMSG00010007004	ENSBMSG00010006977 #23	GNPTAB (ENSBMSG00010006890) #24	SYCP3 (ENSBMSG00010006857) #25	CHPT1 (ENSBMSG00010006840) #26	MYBPC1 (ENSBMSG00010006609) #27	ENSBMSG00010006520 #28	ENSBMSG00010006485 #29	UTP20 (ENSBMSG00010006434) #30	SLC5A8 (ENSBMSG00010006402) #31	ANO4 (ENSBMSG00010006300) #32	GAS2L3 (ENSBMSG00010006259) #34	NR1H4 (ENSBMSG00010006205) #35
Eulipotyphla	ANCESTRAL SPECIES	2065															ENSGT00390000010777 #21	ENSGT00390000014084 #22
Hedgehog	MODERN SPECIES	2155															ENSEEUG00000001690 #21	WASHC3 (ENSEEUG00000001674) #22
Common shrew	MODERN SPECIES	6056															NUP37 (ENSSARG00000003830) #21	WASHC3 (ENSSARG00000003805) #22
Atlantogenata	ANCESTRAL SPECIES	16	ENSGT00940000160733 #8	ENSGT00940000158078 #9	ENSGT00390000000987 #10	ENSGT00390000007685 #11	ENSGT01020000230401.b.a #12	ENSGT00530000064216	ENSGT00940000158637 #13	ENSGT00940000156566 #14	ENSGT00390000015477 #15	ENSGT00940000162483 #16	ENSGT00950000182885.B #17	ENSGT00940000159081 #18	ENSGT00390000004984 #19	ENSGT00390000006088 #20	ENSGT00390000010777 #21	ENSGT00390000014084 #22	ENSGT01030000234578.B.a #23	ENSGT00390000006747 #24	ENSGT00390000000062.x.a #25	ENSGT00950000183117.a.a #26	ENSGT00940000158254 #27	ENSGT00940000155067.a #28	ENSGT00940000155118 #29	ENSGT00390000016813 #30	ENSGT00940000155166.A #31	ENSGT00940000158600 #32	ENSGT00940000159389 #34	ENSGT00940000158037 #35	ENSGT00940000158187 #36	ENSGT00880000138031 #37	ENSGT00950000182976.a.a
Xenarthra	ANCESTRAL SPECIES	18	ENSGT00950000183042.a.b	ENSGT00940000159167	ENSGT00940000160180	ENSGT00940000154917 #7	ENSGT00940000160733 #8	ENSGT00940000158078 #9	ENSGT00390000000987 #10	ENSGT01020000230401.b.a #12	ENSGT00530000064216	ENSGT00940000158637 #13	ENSGT00940000156566 #14	ENSGT00940000162483 #16	ENSGT00950000182885.B #17	ENSGT00390000004984 #19	ENSGT00390000006088 #20	ENSGT00390000014084 #22	ENSGT01030000234578.B.a #23	ENSGT00390000006747 #24	ENSGT00390000000062.x.a #25	ENSGT00950000183117.a.a #26	ENSGT00940000160891	ENSGT00940000154004.b	ENSGT00940000154473.b	ENSGT00940000162434	ENSGT00940000161480	ENSGT00940000157241	ENSGT00940000155731	ENSGT00940000161395	ENSGT00390000005754	ENSGT00390000018031	ENSGT00950000182902.a.d
Sloth	MODERN SPECIES	1861																WASHC3 (ENSCHOG00000000929) #22
Armadillo	MODERN SPECIES	306	GLT8D2 (ENSDNOG00000019794) #9	TDG (ENSDNOG00000013722) #10	HSP90B1 (ENSDNOG00000005863) #12	ENSDNOG00000034872	NT5DC3 (ENSDNOG00000037545) #13	STAB2 (ENSDNOG00000008365) #14	ENSDNOG00000016643	ASCL1 (ENSDNOG00000001616) #16	PAH (ENSDNOG00000049727) #17	ENSDNOG00000031033	IGF1 (ENSDNOG00000046891) #18	ENSDNOG00000041404	PMCH (ENSDNOG00000010046) #19	PARPBP (ENSDNOG00000010035) #20	ENSDNOG00000037353	WASHC3 (ENSDNOG00000012545) #22	DRAM1 (ENSDNOG00000037905) #23	GNPTAB (ENSDNOG00000016941) #24	ENSDNOG00000035194 #25
Afrotheria	ANCESTRAL SPECIES	8	ENSGT00940000154917 #7	ENSGT00940000160733 #8	ENSGT00940000158078 #9	ENSGT00390000000987 #10	ENSGT00390000007685 #11	ENSGT01020000230401.b.a #12	ENSGT00530000064216	ENSGT00940000158637 #13	ENSGT00940000156566 #14	ENSGT00390000015477 #15	ENSGT00950000182885.B #17	ENSGT00940000159081 #18	ENSGT00390000004984 #19	ENSGT00390000006088 #20	ENSGT00390000010777 #21	ENSGT00390000014084 #22	ENSGT01030000234578.B.a #23	ENSGT00390000006747 #24	ENSGT00390000000062.x.a #25	ENSGT00950000183117.a.a #26	ENSGT00940000158254 #27	ENSGT00940000155067.a #28	ENSGT00940000155118 #29	ENSGT00390000016813 #30	ENSGT00940000155166.A #31	ENSGT00940000158600 #32	ENSGT00940000159389 #34	ENSGT00940000158037 #35	ENSGT00940000158187 #36	ENSGT00880000138031 #37	ENSGT00950000182976.a.a
Afrotheria_a	ANCESTRAL SPECIES	8	ENSGT00940000154917 #7	ENSGT00940000160733 #8	ENSGT00940000158078 #9	ENSGT00390000000987 #10	ENSGT00390000007685 #11	ENSGT01020000230401.b.a #12	ENSGT00530000064216	ENSGT00940000158637 #13	ENSGT00940000156566 #14	ENSGT00390000015477 #15	ENSGT00950000182885.B #17	ENSGT00940000159081 #18	ENSGT00390000004984 #19	ENSGT00390000006088 #20	ENSGT00390000010777 #21	ENSGT00390000014084 #22	ENSGT01030000234578.B.a #23	ENSGT00390000006747 #24	ENSGT00390000000062.x.a #25	ENSGT00950000183117.a.a #26	ENSGT00940000158254 #27	ENSGT00940000155067.a #28	ENSGT00940000155118 #29	ENSGT00390000016813 #30	ENSGT00940000155166.A #31	ENSGT00940000158600 #32	ENSGT00940000159389 #34	ENSGT00940000158037 #35	ENSGT00940000158187 #36	ENSGT00880000138031 #37	ENSGT00950000182976.a.a
Elephant	MODERN SPECIES	196	HCFC2 (ENSLAFG00000003817) #8	GLT8D2 (ENSLAFG00000003814) #9	TDG (ENSLAFG00000003813) #10	UQCC6 (ENSLAFG00000005347) #11	HSP90B1 (ENSLAFG00000016029) #12	ENSLAFG00000020765	NT5DC3 (ENSLAFG00000017045) #13	ENSLAFG00000017036 #14	ENSLAFG00000028195 #14	ENSLAFG00000021652 #15	PAH (ENSLAFG00000017414) #17	ENSLAFG00000016013 #18	PMCH (ENSLAFG00000002005) #19	PARPBP (ENSLAFG00000002003) #20	NUP37 (ENSLAFG00000002001) #21	WASHC3 (ENSLAFG00000007850) #22	DRAM1 (ENSLAFG00000004688) #23	GNPTAB (ENSLAFG00000004687) #24	CHPT1 (ENSLAFG00000004678) #26	ENSLAFG00000027866	MYBPC1 (ENSLAFG00000004666) #27	SPIC (ENSLAFG00000015661) #28	ARL1 (ENSLAFG00000026143) #29	UTP20 (ENSLAFG00000012983) #30	SLC5A8 (ENSLAFG00000002166) #31	ANO4 (ENSLAFG00000002161) #32	GAS2L3 (ENSLAFG00000012363) #34	NR1H4 (ENSLAFG00000009154) #35	SLC17A8 (ENSLAFG00000011364) #36	SCYL2 (ENSLAFG00000012773) #37	ENSLAFG00000011615
Tenrec	MODERN SPECIES	7599															NUP37 (ENSETEG00000002257) #21	WASHC3 (ENSETEG00000002254) #22
Marsupialia	ANCESTRAL SPECIES	11	ENSGT00940000160733 #8	ENSGT00940000158078 #9	ENSGT00390000000987 #10	ENSGT00390000007685 #11	ENSGT01020000230401.b.a #12	ENSGT00530000064216	ENSGT00940000158637 #13	ENSGT00940000156566 #14	ENSGT00940000162483 #16	ENSGT00950000182885.B #17	ENSGT00950000182885.C.b ##17	ENSGT00940000159081 #18	ENSGT00390000004984 #19	ENSGT00390000006088 #20	ENSGT00390000010777 #21	ENSGT00390000014084 #22	ENSGT01030000234578.B.a #23	ENSGT00390000006747 #24	ENSGT00390000000062 #25	ENSGT00950000183117.a.a #26	ENSGT00940000158254 #27	ENSGT00940000155067.a #28	ENSGT00940000155118 #29	ENSGT00390000016813 #30	ENSGT00940000155166.A.e.a #31	ENSGT00940000155166.A.e.b.b #31	ENSGT00940000155166.A.e.b.a #31	ENSGT00940000155166.A.f #31	ENSGT00940000158600 #32	ENSGT00940000159389 #34	ENSGT00940000158037 #35
Marsupialia_b	ANCESTRAL SPECIES	13	ENSGT00940000160733 #8	ENSGT00940000158078 #9	ENSGT00390000000987 #10	ENSGT00390000007685 #11	ENSGT01020000230401.b.a #12	ENSGT00530000064216	ENSGT00940000158637 #13	ENSGT00940000156566 #14	ENSGT00940000162483 #16	ENSGT00950000182885.B #17	ENSGT00950000182885.C.b ##17	ENSGT00940000159081 #18	ENSGT00390000004984 #19	ENSGT00390000006088 #20	ENSGT00390000010777 #21	ENSGT00390000014084 #22	ENSGT01030000234578.B.a #23	ENSGT00390000006747 #24	ENSGT00390000000062 #25	ENSGT00950000183117.a.a #26	ENSGT00940000158254 #27	ENSGT00940000155067.a #28	ENSGT00940000155118 #29	ENSGT00390000016813 #30	ENSGT00940000155166.A.e.a #31	ENSGT00940000155166.A.e.b.b #31	ENSGT00940000155166.A.e.b.a #31	ENSGT00940000155166.A.f.a #31	ENSGT00940000158600 #32	ENSGT00940000159389 #34	ENSGT00940000158037 #35
Diprotodontia	ANCESTRAL SPECIES	8	ENSGT00940000154917 #7	ENSGT00940000160733 #8	ENSGT00940000158078 #9	ENSGT00390000000987 #10	ENSGT00390000007685 #11	ENSGT01020000230401.b.a #12	ENSGT00940000158637 #13	ENSGT00940000156566 #14	ENSGT00940000162483 #16	ENSGT00950000182885.B #17	ENSGT00950000182885.C.b ##17	ENSGT00940000159081 #18	ENSGT00390000004984 #19	ENSGT00390000006088 #20	ENSGT00390000010777 #21	ENSGT00390000014084 #22	ENSGT01030000234578.B.a #23	ENSGT00390000006747 #24	ENSGT00390000000062 #25	ENSGT00950000183117.a.a #26	ENSGT00940000158254 #27	ENSGT00940000155067.a #28	ENSGT00940000155118 #29	ENSGT00390000016813 #30	ENSGT00940000155166.A.e.a #31	ENSGT00940000155166.A.e.b.b #31	ENSGT00940000155166.A.e.b.a #31	ENSGT00940000155166.A.f.a #31	ENSGT00940000158600 #32	ENSGT00940000159389 #34	ENSGT00940000158037 #35
Diprotodontia_a	ANCESTRAL SPECIES	8	ENSGT00940000154917 #7	ENSGT00940000160733 #8	ENSGT00940000158078 #9	ENSGT00390000000987 #10	ENSGT00390000007685 #11	ENSGT01020000230401.b.a #12	ENSGT00940000158637 #13	ENSGT00940000156566 #14	ENSGT00940000162483 #16	ENSGT00950000182885.B #17	ENSGT00950000182885.C.b ##17	ENSGT00940000159081 #18	ENSGT00390000004984 #19	ENSGT00390000006088 #20	ENSGT00390000010777 #21	ENSGT00390000014084 #22	ENSGT01030000234578.B.a #23	ENSGT00390000006747 #24	ENSGT00390000000062 #25	ENSGT00950000183117.a.a #26	ENSGT00940000158254 #27	ENSGT00940000155067.a #28	ENSGT00940000155118 #29	ENSGT00390000016813 #30	ENSGT00940000155166.A.e.a #31	ENSGT00940000155166.A.e.b.b #31	ENSGT00940000155166.A.e.b.a #31	ENSGT00940000155166.A.f.a #31	ENSGT00940000158600 #32	ENSGT00940000159389 #34	ENSGT00940000158037 #35
koala	DUPLICATION
koala	MODERN SPECIES	13	NFYB (ENSPCIG00000005022) #7	HCFC2 (ENSPCIG00000004665) #8	GLT8D2 (ENSPCIG00000022772) #9	TDG (ENSPCIG00000022776) #10	UQCC6 (ENSPCIG00000013204) #11	HSP90B1 (ENSPCIG00000013203) #12	NT5DC3 (ENSPCIG00000013200) #13	STAB2 (ENSPCIG00000012433) #14	ASCL1 (ENSPCIG00000009761) #16	PAH (ENSPCIG00000009760) #17	ENSPCIG00000009759 ##17	IGF1 (ENSPCIG00000009756) #18	PMCH (ENSPCIG00000037018) #19	PARPBP (ENSPCIG00000027305) #20	NUP37 (ENSPCIG00000009752) #21	ENSPCIG00000009749 #22	DRAM1 (ENSPCIG00000009746) #23	GNPTAB (ENSPCIG00000009742) #24	CHPT1 (ENSPCIG00000009695) #26	MYBPC1 (ENSPCIG00000026251) #27	SPIC (ENSPCIG00000033679) #28	ENSPCIG00000009683 #29	UTP20 (ENSPCIG00000009298) #30	ENSPCIG00000036133	ENSPCIG00000009029 #31	ENSPCIG00000009014 #31	ENSPCIG00000009010 #31	ENSPCIG00000009002 #31	ANO4 (ENSPCIG00000008989) #32	GAS2L3 (ENSPCIG00000010848) #34	NR1H4 (ENSPCIG00000010847) #35
koala	MODERN SPECIES	34	CRISPLD2 (ENSPCIG00000013522)	ENSPCIG00000013511	ZDHHC7 (ENSPCIG00000013509)	CIBAR2 (ENSPCIG00000013505)	KIAA0513 (ENSPCIG00000013502)	GSE1 (ENSPCIG00000004092)	GINS2 (ENSPCIG00000035341)	C16orf74 (ENSPCIG00000033796)	EMC8 (ENSPCIG00000004725)	COX4I1 (ENSPCIG00000004733)	IRF8 (ENSPCIG00000004752)	FOXF1 (ENSPCIG00000004771)	MTHFSD (ENSPCIG00000004783)	FOXC2 (ENSPCIG00000004805)	FOXL1 (ENSPCIG00000004810)	ENSPCIG00000031752 #22	ENSPCIG00000009863	FBXO31 (ENSPCIG00000009870)	ENSPCIG00000009873	ZCCHC14 (ENSPCIG00000009877)	JPH3 (ENSPCIG00000007544)	KLHDC4 (ENSPCIG00000007537)	SLC7A5 (ENSPCIG00000007532)	CA5A (ENSPCIG00000007525)	BANP (ENSPCIG00000007514)	ENSPCIG00000008173	ENSPCIG00000007505	ENSPCIG00000007500	ENSPCIG00000007498	ZC3H18 (ENSPCIG00000007482)	IL17C (ENSPCIG00000007478)
Common wonbat	MODERN SPECIES	711						ENSVURG00010023958 #13	STAB2 (ENSVURG00010023961) #14	ENSVURG00010023969	ASCL1 (ENSVURG00010023971) #16	PAH (ENSVURG00010023974) #17	ENSVURG00010023976 ##17	IGF1 (ENSVURG00010023977) #18	PMCH (ENSVURG00010023980) #19	PARPBP (ENSVURG00010023982) #20	NUP37 (ENSVURG00010023983) #21	WASHC3 (ENSVURG00010023984) #22	DRAM1 (ENSVURG00010023986) #23	ENSVURG00010023987	GNPTAB (ENSVURG00010023988) #24	ENSVURG00010023989	ENSVURG00010023990 #25	CHPT1 (ENSVURG00010023991) #26	MYBPC1 (ENSVURG00010024011) #27	SPIC (ENSVURG00010024061) #28	ENSVURG00010024062 #29	UTP20 (ENSVURG00010024063) #30	ENSVURG00010024065 #31	ENSVURG00010024066 #31	ENSVURG00010024069 #31	ENSVURG00010024076 #31	ENSVURG00010024079
Wallaby	MODERN SPECIES	2930																WASHC3 (ENSMEUG00000004888) #22
Tasmanian devil	MODERN SPECIES	4	NFYB (ENSSHAG00000027758) #7	HCFC2 (ENSSHAG00000005177) #8	GLT8D2 (ENSSHAG00000003984) #9	TDG (ENSSHAG00000024089) #10	ENSSHAG00000031005 #11	HSP90B1 (ENSSHAG00000001325) #12	ENSSHAG00000000885	NT5DC3 (ENSSHAG00000000126) #13	STAB2 (ENSSHAG00000007590) #14	ASCL1 (ENSSHAG00000024610) #16	PAH (ENSSHAG00000011248) #17	IGF1 (ENSSHAG00000020467) #18	PMCH (ENSSHAG00000020571) #19	PARPBP (ENSSHAG00000005413) #20	NUP37 (ENSSHAG00000004596) #21	WASHC3 (ENSSHAG00000002767) #22	DRAM1 (ENSSHAG00000030339) #23	GNPTAB (ENSSHAG00000008757) #24	ENSSHAG00000008390 #25	CHPT1 (ENSSHAG00000008105) #26	MYBPC1 (ENSSHAG00000007093) #27	SPIC (ENSSHAG00000005809) #28	ARL1 (ENSSHAG00000028502) #29	UTP20 (ENSSHAG00000002298) #30	ENSSHAG00000004549 #31	ENSSHAG00000027838 #31	ENSSHAG00000014997 #31	ANO4 (ENSSHAG00000014385) #32	GAS2L3 (ENSSHAG00000030333) #34	NR1H4 (ENSSHAG00000012333) #35	SLC17A8 (ENSSHAG00000011526) #36
Opossum	MODERN SPECIES	7	HCFC2 (ENSMODG00000002178) #8	GLT8D2 (ENSMODG00000002194) #9	TDG (ENSMODG00000002206) #10	ENSMODG00000024970 #11	ENSMODG00000024971	HSP90B1 (ENSMODG00000002234) #12	ENSMODG00000002244	NT5DC3 (ENSMODG00000002283) #13	ASCL1 (ENSMODG00000041211) #16	PAH (ENSMODG00000002380) #17	ENSMODG00000002429 ##17	IGF1 (ENSMODG00000002506) #18	PMCH (ENSMODG00000002527) #19	PARPBP (ENSMODG00000002544) #20	NUP37 (ENSMODG00000002555) #21	WASHC3 (ENSMODG00000038419) #22	ENSMODG00000002593 #23	GNPTAB (ENSMODG00000002612) #24	ENSMODG00000051099 #25	CHPT1 (ENSMODG00000002564) #26	MYBPC1 (ENSMODG00000003026) #27	SPIC (ENSMODG00000003044) #28	ARL1 (ENSMODG00000003056) #29	UTP20 (ENSMODG00000003141) #30	ENSMODG00000003187 #31	ENSMODG00000028751 #31	ENSMODG00000003207 #31	ENSMODG00000027964 #31	ENSMODG00000045282	ENSMODG00000028414 #31	ENSMODG00000027631 #31
Platypus	MODERN SPECIES	5	TXNRD1 (ENSOANG00000005546)	NFYB (ENSOANG00000040290) #7	HCFC2 (ENSOANG00000005549) #8	GLT8D2 (ENSOANG00000005550) #9	TDG (ENSOANG00000005552) #10	ENSOANG00000040065 #11	HSP90B1 (ENSOANG00000005554) #12	NT5DC3 (ENSOANG00000042025) #13	STAB2 (ENSOANG00000005561) #14	PAH (ENSOANG00000005563) #17	ENSOANG00000005565 ##17	ENSOANG00000005566 #18	PMCH (ENSOANG00000044359) #19	ENSOANG00000005568 #20	NUP37 (ENSOANG00000005569) #21	WASHC3 (ENSOANG00000005571) #22	ENSOANG00000051045 #23	ENSOANG00000005573 #23	GNPTAB (ENSOANG00000005574) #24	ENSOANG00000029439 #25	CHPT1 (ENSOANG00000005575) #26	MYBPC1 (ENSOANG00000005576) #27	SPIC (ENSOANG00000042898) #28	ARL1 (ENSOANG00000043677) #29	UTP20 (ENSOANG00000005578) #30	SLC5A8 (ENSOANG00000020001) #31	ANO4 (ENSOANG00000005581) #32	GAS2L3 (ENSOANG00000050205) #34	NR1H4 (ENSOANG00000005583) #35	SLC17A8 (ENSOANG00000005584) #36	SCYL2 (ENSOANG00000005585) #37
Sauria	ANCESTRAL SPECIES	4	ENSGT00940000154917 #7	ENSGT00940000160733 #8	ENSGT00940000158078 #9	ENSGT00390000000987 #10	ENSGT00390000007685 #11	ENSGT01020000230401.b.a #12	ENSGT00940000158637 #13	ENSGT00940000156566 #14	ENSGT00940000162483 #16	ENSGT00950000182885.B #17	ENSGT00950000182885.C.b ##17	ENSGT00940000159081 #18	ENSGT00390000004984 #19	ENSGT00390000006088 #20	ENSGT00390000010777 #21	ENSGT00390000014084 #22	ENSGT01030000234578.B.a #23	ENSGT00390000006747 #24	ENSGT00390000000062 #25	ENSGT00950000183117.a.a #26	ENSGT00940000158254 #27	ENSGT00940000155067.a #28	ENSGT00940000154649.B	ENSGT00940000157903	ENSGT00940000157742	ENSGT00530000063472.b.b.a.a	ENSGT00950000182881.a.a.a	ENSGT00940000158632	ENSGT00940000159863	ENSGT00940000155961	ENSGT00940000165307.d
Lepidosauria	ANCESTRAL SPECIES	3	ENSGT00940000154917 #7	ENSGT00940000160733 #8	ENSGT00940000158078 #9	ENSGT00390000000987 #10	ENSGT00390000007685 #11	ENSGT01020000230401.b.a #12	ENSGT00940000158637 #13	ENSGT00940000156566 #14	ENSGT00940000162483 #16	ENSGT00950000182885.B #17	ENSGT00950000182885.C.b ##17	ENSGT00940000159081 #18	ENSGT00390000004984 #19	ENSGT00390000006088 #20	ENSGT00390000010777 #21	ENSGT00390000014084 #22	ENSGT01030000234578.B.a #23	ENSGT00390000006747 #24	ENSGT00390000000062 #25	ENSGT00950000183117.a.a #26	ENSGT00940000158254 #27	ENSGT00940000155067.a #28	ENSGT00940000154649.B	ENSGT00940000157903	ENSGT00940000157742	ENSGT00530000063472.b.b.a.a	ENSGT00950000182881.a.a.a	ENSGT00940000158632	ENSGT00940000159863	ENSGT00940000155961	ENSGT00940000165307.d
Episquamata	ANCESTRAL SPECIES	3	ENSGT00940000154917 #7	ENSGT00940000160733 #8	ENSGT00940000158078 #9	ENSGT00390000000987 #10	ENSGT00390000007685 #11	ENSGT01020000230401.b.a #12	ENSGT00940000158637 #13	ENSGT00940000156566 #14	ENSGT00940000162483 #16	ENSGT00950000182885.B #17	ENSGT00950000182885.C.b ##17	ENSGT00940000159081 #18	ENSGT00390000004984 #19	ENSGT00390000006088 #20	ENSGT00390000010777 #21	ENSGT00390000014084 #22	ENSGT01030000234578.B.a #23	ENSGT00390000006747 #24	ENSGT00390000000062 #25	ENSGT00950000183117.a.a #26	ENSGT00940000158254 #27	ENSGT00940000155067.a #28	ENSGT00940000154649.B	ENSGT00940000157903	ENSGT00940000157742	ENSGT00530000063472.b.b.a.a	ENSGT00950000182881.a.a.a	ENSGT00940000158632	ENSGT00940000159863	ENSGT00940000155961	ENSGT00940000165307.d
Laterata	ANCESTRAL SPECIES	6	ENSGT00940000154917 #7	ENSGT00940000160733 #8	ENSGT00940000158078 #9	ENSGT00390000000987 #10	ENSGT00390000007685 #11	ENSGT01020000230401.b.a #12	ENSGT00940000158637 #13	ENSGT00940000156566 #14	ENSGT00940000162483 #16	ENSGT00950000182885.B #17	ENSGT00950000182885.C.b ##17	ENSGT00940000159081 #18	ENSGT00390000004984 #19	ENSGT00390000006088 #20	ENSGT00390000010777 #21	ENSGT00390000014084 #22	ENSGT01030000234578.B.a #23	ENSGT00390000006747 #24	ENSGT00390000000062 #25	ENSGT00950000183117.a.a #26	ENSGT00940000158254 #27	ENSGT00940000155067.a #28	ENSGT00940000154649.B	ENSGT00940000157903	ENSGT00940000157742	ENSGT00530000063472.b.b.a.a	ENSGT00950000182881.a.a.a	ENSGT00940000158632	ENSGT00940000159863	ENSGT00940000155961	ENSGT00940000165307.d
Common wall lizard	MODERN SPECIES	1	NFYB (ENSPMRG00000010483) #7	HCFC2 (ENSPMRG00000010486) #8	GLT8D2 (ENSPMRG00000010490) #9	TDG (ENSPMRG00000010495) #10	UQCC6 (ENSPMRG00000010501) #11	HSP90B1 (ENSPMRG00000010505) #12	NT5DC3 (ENSPMRG00000010517) #13	STAB2 (ENSPMRG00000010582) #14	PAH (ENSPMRG00000010933) #17	ASCL1 (ENSPMRG00000010946) #16	ENSPMRG00000010949 ##17	IGF1 (ENSPMRG00000010957) #18	PMCH (ENSPMRG00000010963) #19	PARPBP (ENSPMRG00000010971) #20	NUP37 (ENSPMRG00000010984) #21	WASHC3 (ENSPMRG00000010991) #22	DRAM1 (ENSPMRG00000010997) #23	GNPTAB (ENSPMRG00000011003) #24	ENSPMRG00000011018 #25	CHPT1 (ENSPMRG00000011047) #26	MYBPC1 (ENSPMRG00000011310) #27	SPIC (ENSPMRG00000012776) #28	PARP12 (ENSPMRG00000012781)	TBXAS1 (ENSPMRG00000012789)	HIPK2 (ENSPMRG00000012795)	KIAA1549 (ENSPMRG00000012806)	ENSPMRG00000012828	ATP6V0A4 (ENSPMRG00000012841)	SVOPL (ENSPMRG00000012883)	TRIM24 (ENSPMRG00000012899)	ENSPMRG00000012905
Argentine black and white tegu	MODERN SPECIES	6	NFYB (ENSSMRG00000015958) #7	HCFC2 (ENSSMRG00000015959) #8	GLT8D2 (ENSSMRG00000015961) #9	TDG (ENSSMRG00000015962) #10	UQCC6 (ENSSMRG00000015963) #11	HSP90B1 (ENSSMRG00000015964) #12	NT5DC3 (ENSSMRG00000015965) #13	STAB2 (ENSSMRG00000015966) #14	ASCL1 (ENSSMRG00000015968) #16	PAH (ENSSMRG00000015969) #17	ENSSMRG00000015970 ##17	IGF1 (ENSSMRG00000015971) #18	PMCH (ENSSMRG00000015973) #19	PARPBP (ENSSMRG00000015974) #20	NUP37 (ENSSMRG00000015976) #21	WASHC3 (ENSSMRG00000015977) #22	DRAM1 (ENSSMRG00000015978) #23	GNPTAB (ENSSMRG00000015980) #24	ENSSMRG00000015981 #25	CHPT1 (ENSSMRG00000015982) #26	MYBPC1 (ENSSMRG00000015983) #27	PARP12 (ENSSMRG00000015984)	TBXAS1 (ENSSMRG00000015985)	ENSSMRG00000015987	HIPK2 (ENSSMRG00000015988)	KIAA1549 (ENSSMRG00000015989)	ATP6V0A4 (ENSSMRG00000015991)	SVOPL (ENSSMRG00000015992)	TRIM24 (ENSSMRG00000015993)	AKR1D1 (ENSSMRG00000015996)	ENSSMRG00000015997
Toxicofera	ANCESTRAL SPECIES	7	ENSGT00940000154917 #7	ENSGT00940000160733 #8	ENSGT00940000158078 #9	ENSGT00390000000987 #10	ENSGT00390000007685 #11	ENSGT01020000230401.b.a #12	ENSGT00940000158637 #13	ENSGT00940000156566 #14	ENSGT00940000162483 #16	ENSGT00950000182885.B #17	ENSGT00950000182885.C.b ##17	ENSGT00940000159081 #18	ENSGT00390000004984 #19	ENSGT00390000006088 #20	ENSGT00390000010777 #21	ENSGT00390000014084 #22	ENSGT01030000234578.B.a #23	ENSGT00390000006747 #24	ENSGT00390000000062 #25	ENSGT00950000183117.a.a #26	ENSGT00940000158254 #27	ENSGT00940000155067.a #28	ENSGT00940000154649.B	ENSGT00940000157903	ENSGT00940000157742	ENSGT00530000063472.b.b.a.a	ENSGT00950000182881.a.a.a.r.b	ENSGT00950000182881.a.a.a.r.a	ENSGT00940000158632	ENSGT00940000159863	ENSGT00940000155961
Elapidae	ANCESTRAL SPECIES	6	ENSGT00940000154917 #7	ENSGT00940000160733 #8	ENSGT00940000158078 #9	ENSGT00390000000987 #10	ENSGT00940000173873	ENSGT01020000230401.b.a #12	ENSGT00940000158637 #13	ENSGT00940000156566 #14	ENSGT00940000162483 #16	ENSGT00950000182885.B #17	ENSGT00950000182885.C.b ##17	ENSGT00940000159081 #18	ENSGT00390000004984 #19	ENSGT00390000006088 #20	ENSGT00390000010777 #21	ENSGT00390000014084 #22	ENSGT01030000234578.B.a #23	ENSGT00390000006747 #24	ENSGT00390000000062 #25	ENSGT00950000183117.a.a #26	ENSGT00940000158254 #27	ENSGT00940000155067.a #28	ENSGT00940000154649.B	ENSGT00940000157903	ENSGT00940000157742	ENSGT00530000063472.b.b.a.a.c	ENSGT00950000182881.a.a.a.r.a	ENSGT00940000158632	ENSGT00940000159863	ENSGT00940000155961	ENSGT00940000165307.d
Elapidae_a	ANCESTRAL SPECIES	1	ENSGT00940000154917 #7	ENSGT00940000160733 #8	ENSGT00940000158078 #9	ENSGT00390000000987 #10	ENSGT00940000173873	ENSGT01020000230401.b.a #12	ENSGT00940000158637 #13	ENSGT00940000156566 #14	ENSGT00940000162483 #16	ENSGT00950000182885.B #17	ENSGT00950000182885.C.b ##17	ENSGT00940000159081 #18	ENSGT00390000004984 #19	ENSGT00390000006088 #20	ENSGT00390000010777 #21	ENSGT00390000014084 #22	ENSGT01030000234578.B.a #23	ENSGT00390000006747 #24	ENSGT00390000000062 #25	ENSGT00950000183117.a.a #26	ENSGT00940000158254 #27	ENSGT00940000155067.a #28	ENSGT00940000154649.B	ENSGT00940000157903	ENSGT00940000157742	ENSGT00530000063472.b.b.a.a.c	ENSGT00950000182881.a.a.a.r.a	ENSGT00940000158632	ENSGT00940000159863	ENSGT00940000155961	ENSGT00940000165307.d
Acanthophiinae	ANCESTRAL SPECIES		ENSGT00940000154917 #7	ENSGT00940000160733 #8	ENSGT00940000158078 #9	ENSGT00390000000987 #10	ENSGT00940000173873	ENSGT01020000230401.b.a #12	ENSGT00940000158637 #13	ENSGT00940000156566 #14	ENSGT00940000162483 #16	ENSGT00950000182885.B #17	ENSGT00950000182885.C.b ##17	ENSGT00940000159081 #18	ENSGT00390000004984 #19	ENSGT00390000006088 #20	ENSGT00390000010777 #21	ENSGT00390000014084 #22	ENSGT01030000234578.B.a #23	ENSGT00390000006747 #24	ENSGT00390000000062 #25	ENSGT00950000183117.a.a #26	ENSGT00940000158254 #27	ENSGT00940000155067.a #28	ENSGT00940000154649.B	ENSGT00940000157903	ENSGT00940000157742	ENSGT00530000063472.b.b.a.a.c	ENSGT00950000182881.a.a.a.r.a	ENSGT00940000158632	ENSGT00940000159863	ENSGT00940000155961	ENSGT00940000165307.d
Eastern brown snake	MODERN SPECIES		NFYB (ENSPTXG00000008536) #7	HCFC2 (ENSPTXG00000008535) #8	GLT8D2 (ENSPTXG00000008534) #9	TDG (ENSPTXG00000008533) #10	ENSPTXG00000008531	HSP90B1 (ENSPTXG00000008530) #12	NT5DC3 (ENSPTXG00000008529) #13	STAB2 (ENSPTXG00000008527) #14	ASCL1 (ENSPTXG00000008524) #16	PAH (ENSPTXG00000008522) #17	ENSPTXG00000008519 ##17	IGF1 (ENSPTXG00000008518) #18	PMCH (ENSPTXG00000008517) #19	ENSPTXG00000008516 #20	NUP37 (ENSPTXG00000008515) #21	WASHC3 (ENSPTXG00000008514) #22	DRAM1 (ENSPTXG00000008513) #23	GNPTAB (ENSPTXG00000008512) #24	ENSPTXG00000008509 #25	CHPT1 (ENSPTXG00000008508) #26	MYBPC1 (ENSPTXG00000007661) #27	SPIC (ENSPTXG00000007652) #28	PARP12 (ENSPTXG00000007649)	TBXAS1 (ENSPTXG00000007645)	HIPK2 (ENSPTXG00000007643)	ENSPTXG00000007642	ENSPTXG00000007640	ATP6V0A4 (ENSPTXG00000007574)	SVOPL (ENSPTXG00000007573)	TRIM24 (ENSPTXG00000007373)	AKR1D1 (ENSPTXG00000007371)
Mainland tiger snake	MODERN SPECIES	6	NFYB (ENSNSUG00000013287) #7	HCFC2 (ENSNSUG00000013290) #8	GLT8D2 (ENSNSUG00000013370) #9	TDG (ENSNSUG00000013418) #10	ENSNSUG00000013422	HSP90B1 (ENSNSUG00000013424) #12	ENSNSUG00000013426 #13	STAB2 (ENSNSUG00000013439) #14	ASCL1 (ENSNSUG00000013526) #16	PAH (ENSNSUG00000013527) #17	ENSNSUG00000013528 ##17	IGF1 (ENSNSUG00000013529) #18	PMCH (ENSNSUG00000013530) #19	ENSNSUG00000013531 #20	NUP37 (ENSNSUG00000013532) #21	WASHC3 (ENSNSUG00000013533) #22	DRAM1 (ENSNSUG00000013534) #23	ENSNSUG00000013535 #24	ENSNSUG00000013536 #24	ENSNSUG00000013537 #25	CHPT1 (ENSNSUG00000013538) #26	MYBPC1 (ENSNSUG00000013539) #27	ENSNSUG00000013540	ENSNSUG00000013541	TBXAS1 (ENSNSUG00000013542)	HIPK2 (ENSNSUG00000013543)	KIAA1549 (ENSNSUG00000013545)	ATP6V0A4 (ENSNSUG00000013546)	SVOPL (ENSNSUG00000013571)	TRIM24 (ENSNSUG00000013577)	ENSNSUG00000013595
Blue-lipped sea krait	MODERN SPECIES	3988															NUP37 (ENSLLTG00000003905) #21	WASHC3 (ENSLLTG00000003940) #22	DRAM1 (ENSLLTG00000003968) #23
Indian cobra	MODERN SPECIES	6	HCFC2 (ENSNNAG00000014677) #8	ENSNNAG00000014978 #9	ENSNNAG00000014991 #9	TDG (ENSNNAG00000015016) #10	ENSNNAG00000015039	HSP90B1 (ENSNNAG00000015045) #12	NT5DC3 (ENSNNAG00000015101) #13	STAB2 (ENSNNAG00000015507) #14	ASCL1 (ENSNNAG00000016207) #16	PAH (ENSNNAG00000016212) #17	ENSNNAG00000016238 ##17	IGF1 (ENSNNAG00000016278) #18	PMCH (ENSNNAG00000016295) #19	ENSNNAG00000016299 #20	NUP37 (ENSNNAG00000016306) #21	WASHC3 (ENSNNAG00000016319) #22	DRAM1 (ENSNNAG00000016330) #23	GNPTAB (ENSNNAG00000016350) #24	ENSNNAG00000016453 #25	CHPT1 (ENSNNAG00000016480) #26	MYBPC1 (ENSNNAG00000016511) #27	SPIC (ENSNNAG00000016538) #28	PARP12 (ENSNNAG00000016544)	TBXAS1 (ENSNNAG00000016559)	HIPK2 (ENSNNAG00000016567)	ENSNNAG00000016581	ENSNNAG00000016587	ENSNNAG00000016594	ENSNNAG00000016612	SVOPL (ENSNNAG00000016721)	TRIM24 (ENSNNAG00000016763)
Lizard	MODERN SPECIES	4	GLT8D2 (ENSACAG00000016095) #9	ENSACAG00000028913	TDG (ENSACAG00000016148) #10	UQCC6 (ENSACAG00000038668) #11	HSP90B1 (ENSACAG00000016190) #12	NT5DC3 (ENSACAG00000016283) #13	STAB2 (ENSACAG00000016328) #14	PAH (ENSACAG00000016374) #17	ENSACAG00000016460 ##17	ENSACAG00000042953	IGF1 (ENSACAG00000042659) #18	ENSACAG00000042781	PMCH (ENSACAG00000016532) #19	PARPBP (ENSACAG00000029455) #20	NUP37 (ENSACAG00000016551) #21	WASHC3 (ENSACAG00000040073) #22	DRAM1 (ENSACAG00000016578) #23	ENSACAG00000042759	GNPTAB (ENSACAG00000016592) #24	CHPT1 (ENSACAG00000016640) #26	MYBPC1 (ENSACAG00000016657) #27	SPIC (ENSACAG00000040343) #28	PARP12 (ENSACAG00000016815)	ENSACAG00000016841	HIPK2 (ENSACAG00000016940)	ENSACAG00000034835	ENSACAG00000016985	ENSACAG00000023856	ENSACAG00000011643	ENSACAG00000035765	SSBP1 (ENSACAG00000011577)
tuatara	MODERN SPECIES	822													PMCH (ENSSPUG00000007132) #19	PARPBP (ENSSPUG00000007136) #20	NUP37 (ENSSPUG00000007150) #21	WASHC3 (ENSSPUG00000007165) #22	DRAM1 (ENSSPUG00000007171) #23	GNPTAB (ENSSPUG00000007179) #24	ENSSPUG00000007193 #25	CHPT1 (ENSSPUG00000007213) #26	MYBPC1 (ENSSPUG00000007228) #27	SPIC (ENSSPUG00000007276) #28	PARP12 (ENSSPUG00000007335)	TBXAS1 (ENSSPUG00000007527)	HIPK2 (ENSSPUG00000007641)
Archelosauria	ANCESTRAL SPECIES	3	ENSGT00940000154917 #7	ENSGT00940000160733 #8	ENSGT00940000158078 #9	ENSGT00390000000987 #10	ENSGT00390000007685 #11	ENSGT01020000230401.b.a #12	ENSGT00940000158637 #13	ENSGT00940000156566 #14	ENSGT00940000162483 #16	ENSGT00950000182885.B #17	ENSGT00950000182885.C.b ##17	ENSGT00940000159081 #18	ENSGT00390000004984 #19	ENSGT00390000006088 #20	ENSGT00390000010777 #21	ENSGT00390000014084 #22	ENSGT01030000234578.B.a #23	ENSGT00390000006747 #24	ENSGT00390000000062 #25	ENSGT00950000183117.a.a #26	ENSGT00940000158254 #27	ENSGT00940000155067.a #28	ENSGT00940000154649.B	ENSGT00940000157903	ENSGT00940000157742	ENSGT00530000063472.b.b.a.a	ENSGT00950000182881.a.a.a	ENSGT00940000158632	ENSGT00940000159863	ENSGT00940000155961	ENSGT00940000165307.d
Cryptodira	ANCESTRAL SPECIES	10	ENSGT00940000154917 #7	ENSGT00940000160733 #8	ENSGT00940000158078 #9	ENSGT00390000000987 #10	ENSGT00390000007685 #11	ENSGT01020000230401.b.a #12	ENSGT00940000158637 #13	ENSGT00940000156566 #14	ENSGT00940000162483 #16	ENSGT00950000182885.B #17	ENSGT00950000182885.C.b ##17	ENSGT00940000159081 #18	ENSGT00390000004984 #19	ENSGT00390000006088 #20	ENSGT00390000010777 #21	ENSGT00390000014084 #22	ENSGT01030000234578.B.a #23	ENSGT00390000006747 #24	ENSGT00390000000062 #25	ENSGT00950000183117.a.a #26	ENSGT00940000158254 #27	ENSGT00940000155067.a #28	ENSGT00940000154649.B	ENSGT00940000157903	ENSGT00940000157742	ENSGT00530000063472.b.b.a.a	ENSGT00950000182881.a.a.a	ENSGT00940000158632	ENSGT00940000159863	ENSGT00940000155961	ENSGT00940000165307.d
Testudinoidea	ANCESTRAL SPECIES	4	ENSGT00940000154917 #7	ENSGT00940000160733 #8	ENSGT00940000158078 #9	ENSGT00390000000987 #10	ENSGT00390000007685 #11	ENSGT01020000230401.b.a #12	ENSGT00940000158637 #13	ENSGT00940000156566.q #14	ENSGT00940000162483 #16	ENSGT00950000182885.B #17	ENSGT00950000182885.C.b ##17	ENSGT00940000159081.a #18	ENSGT00390000004984 #19	ENSGT00390000006088 #20	ENSGT00390000010777 #21	ENSGT00390000014084 #22	ENSGT01030000234578.B.a #23	ENSGT00390000006747 #24	ENSGT00390000000062 #25	ENSGT00950000183117.a.a #26	ENSGT00940000158254 #27	ENSGT00940000155067.a #28	ENSGT00940000154649.B	ENSGT00940000157903	ENSGT00940000157742	ENSGT00530000063472.b.b.a.a	ENSGT00950000182881.a.a.a	ENSGT00940000158632	ENSGT00940000159863	ENSGT00940000155961	ENSGT00940000165307.d
Emydidae	ANCESTRAL SPECIES	5	ENSGT00940000154917 #7	ENSGT00940000160733 #8	ENSGT00940000158078 #9	ENSGT00390000000987 #10	ENSGT00390000007685 #11	ENSGT01020000230401.b.a #12	ENSGT00940000158637 #13	ENSGT00940000156566.q #14	ENSGT00940000162483 #16	ENSGT00950000182885.B #17	ENSGT00950000182885.C.b ##17	ENSGT00940000159081.a #18	ENSGT00390000004984 #19	ENSGT00390000006088 #20	ENSGT00390000010777 #21	ENSGT00390000014084 #22	ENSGT01030000234578.B.a #23	ENSGT00390000006747 #24	ENSGT00390000000062 #25	ENSGT00950000183117.a.a #26	ENSGT00940000158254 #27	ENSGT00940000155067.a #28	ENSGT00940000154649.B	ENSGT00940000157903	ENSGT00940000157742	ENSGT00530000063472.b.b.a.a	ENSGT00950000182881.a.a.a	ENSGT00940000158632	ENSGT00940000159863	ENSGT00940000155961	ENSGT00940000165307.d
painted turtle	MODERN SPECIES	777	ENSCPBG00000008162	ENSCPBG00000008159	ENSCPBG00000008157	TMPRSS3 (ENSCPBG00000008149)	UBASH3A (ENSCPBG00000008139)	RSPH1 (ENSCPBG00000008130)	SLC37A1 (ENSCPBG00000008117)	ENSCPBG00000008106 #14	ASCL1 (ENSCPBG00000008090) #16	PAH (ENSCPBG00000001527) #17	ENSCPBG00000001339 ##17	IGF1 (ENSCPBG00000001307) #18	PMCH (ENSCPBG00000001283) #19	PARPBP (ENSCPBG00000001274) #20	NUP37 (ENSCPBG00000001248) #21	WASHC3 (ENSCPBG00000001237) #22	DRAM1 (ENSCPBG00000001229) #23	GNPTAB (ENSCPBG00000001196) #24	ENSCPBG00000001176 #25	CHPT1 (ENSCPBG00000001158) #26	MYBPC1 (ENSCPBG00000001017) #27
Three-toed box turtle	MODERN SPECIES	118	NFYB (ENSTMTG00000019360) #7	HCFC2 (ENSTMTG00000019373) #8	GLT8D2 (ENSTMTG00000019410) #9	TDG (ENSTMTG00000019556) #10	UQCC6 (ENSTMTG00000019586) #11	HSP90B1 (ENSTMTG00000019595) #12	NT5DC3 (ENSTMTG00000019654) #13	STAB2 (ENSTMTG00000019925) #14	ASCL1 (ENSTMTG00000020230) #16	PAH (ENSTMTG00000020236) #17	ENSTMTG00000020280 ##17	IGF1 (ENSTMTG00000020327) #18	PMCH (ENSTMTG00000020333) #19	PARPBP (ENSTMTG00000020341) #20	NUP37 (ENSTMTG00000020359) #21	WASHC3 (ENSTMTG00000020384) #22	DRAM1 (ENSTMTG00000020390) #23	GNPTAB (ENSTMTG00000020401) #24	ENSTMTG00000020424 #25	CHPT1 (ENSTMTG00000020436) #26	MYBPC1 (ENSTMTG00000020461) #27	SPIC (ENSTMTG00000020572) #28	PARP12 (ENSTMTG00000020602)	TBXAS1 (ENSTMTG00000020617)	HIPK2 (ENSTMTG00000020766)	KIAA1549 (ENSTMTG00000020792)	ATP6V0A4 (ENSTMTG00000020907)	SVOPL (ENSTMTG00000020933)	TRIM24 (ENSTMTG00000020953)	ENSTMTG00000020965	AKR1D1 (ENSTMTG00000020970)
Testudinidae	ANCESTRAL SPECIES	14	ENSGT00940000154917 #7	ENSGT00940000160733 #8	ENSGT00940000158078 #9	ENSGT00390000000987 #10	ENSGT00390000007685 #11	ENSGT01020000230401.b.a #12	ENSGT00940000158637 #13	ENSGT00940000156566.q #14	ENSGT00940000162483 #16	ENSGT00950000182885.B #17	ENSGT00950000182885.C.b ##17	ENSGT00940000159081.a #18	ENSGT00390000004984 #19	ENSGT00390000006088 #20	ENSGT00390000010777 #21	ENSGT00390000014084 #22	ENSGT01030000234578.B.a #23	ENSGT00390000006747 #24	ENSGT00390000000062 #25	ENSGT00950000183117.a.a #26	ENSGT00940000158254 #27	ENSGT00940000155067.a #28	ENSGT00940000154649.B	ENSGT00940000157903	ENSGT00940000157742	ENSGT00530000063472.b.b.a.a	ENSGT00950000182881.a.a.a	ENSGT00940000158632	ENSGT00940000159863	ENSGT00940000155961	ENSGT00940000165307.d
Abingdon island giant tortoise	MODERN SPECIES	831														ENSCABG00000019902 #20	NUP37 (ENSCABG00000019905) #21	WASHC3 (ENSCABG00000019908) #22	DRAM1 (ENSCABG00000019910) #23	GNPTAB (ENSCABG00000019918) #24	ENSCABG00000019952 #25	CHPT1 (ENSCABG00000019980) #26	MYBPC1 (ENSCABG00000020107) #27	SPIC (ENSCABG00000020115) #28	PARP12 (ENSCABG00000020118)	TBXAS1 (ENSCABG00000020127)	ENSCABG00000020142	HIPK2 (ENSCABG00000020149)	KIAA1549 (ENSCABG00000020156)	ATP6V0A4 (ENSCABG00000020161)	SVOPL (ENSCABG00000020166)	TRIM24 (ENSCABG00000020171)	AKR1D1 (ENSCABG00000020182)
Chinese turtle	MODERN SPECIES	2219	NFYB (ENSPSIG00000006988) #7	HCFC2 (ENSPSIG00000007474) #8	GLT8D2 (ENSPSIG00000009016) #9	TDG (ENSPSIG00000009786) #10	UQCC6 (ENSPSIG00000009827) #11	HSP90B1 (ENSPSIG00000009846) #12	NT5DC3 (ENSPSIG00000011749) #13	ENSPSIG00000012128 #14	ENSPSIG00000012196 #14	PAH (ENSPSIG00000012379) #17	ENSPSIG00000013030 ##17	IGF1 (ENSPSIG00000013219) #18	PMCH (ENSPSIG00000013388) #19	PARPBP (ENSPSIG00000013381) #20	NUP37 (ENSPSIG00000013472) #21	WASHC3 (ENSPSIG00000013501) #22	DRAM1 (ENSPSIG00000014059) #23	GNPTAB (ENSPSIG00000014100) #24	ENSPSIG00000014107 #25	CHPT1 (ENSPSIG00000014110) #26	MYBPC1 (ENSPSIG00000014656) #27	SPIC (ENSPSIG00000015106) #28	PARP12 (ENSPSIG00000015130)	ENSPSIG00000015143	ENSPSIG00000015157	HIPK2 (ENSPSIG00000015313)	KIAA1549 (ENSPSIG00000015324)	ATP6V0A4 (ENSPSIG00000015413)	SVOPL (ENSPSIG00000015549)	TRIM24 (ENSPSIG00000015663)	ENSPSIG00000017345
Archosauria	ANCESTRAL SPECIES	4	ENSGT00940000154917 #7	ENSGT00940000160733 #8	ENSGT00940000158078 #9	ENSGT00390000000987 #10	ENSGT00390000007685 #11	ENSGT01020000230401.b.a #12	ENSGT00940000158637 #13	ENSGT00940000156566 #14	ENSGT00940000162483 #16	ENSGT00950000182885.B #17	ENSGT00950000182885.C.b ##17	ENSGT00940000159081 #18	ENSGT00390000004984 #19	ENSGT00390000006088 #20	ENSGT00390000010777 #21	ENSGT00390000014084 #22	ENSGT01030000234578.B.a #23	ENSGT00390000006747 #24	ENSGT00390000000062 #25	ENSGT00950000183117.a.a #26	ENSGT00940000158254 #27	ENSGT00940000155067.a #28	ENSGT00940000154649.B	ENSGT00940000157903	ENSGT00940000157742	ENSGT00530000063472.b.b.a.a	ENSGT00950000182881.a.a.a	ENSGT00940000158632	ENSGT00940000159863	ENSGT00940000155961	ENSGT00940000165307.d
Aves	ANCESTRAL SPECIES	1	ENSGT00940000154917 #7	ENSGT00940000160733 #8	ENSGT00940000158078 #9	ENSGT00390000000987 #10	ENSGT00390000007685 #11	ENSGT01020000230401.b.a #12	ENSGT00940000158637 #13	ENSGT00940000156566 #14	ENSGT00940000162483 #16	ENSGT00950000182885.B #17	ENSGT00950000182885.C.b ##17	ENSGT00940000159081 #18	ENSGT00390000004984 #19	ENSGT00390000006088 #20	ENSGT00390000010777 #21	ENSGT00390000014084 #22	ENSGT01030000234578.B.a #23	ENSGT00390000006747 #24	ENSGT00390000000062 #25	ENSGT00950000183117.a.a #26	ENSGT00940000158254 #27	ENSGT00940000155067.a #28	ENSGT00940000154649.B	ENSGT00940000157903	ENSGT00940000157742	ENSGT00530000063472.b.b.a.a	ENSGT00950000182881.a.a.a	ENSGT00940000158632	ENSGT00940000159863	ENSGT00940000155961	ENSGT00940000165307.d
Neognathae	ANCESTRAL SPECIES	3	ENSGT00940000154917 #7	ENSGT00940000160733 #8	ENSGT00940000158078 #9	ENSGT00390000000987 #10	ENSGT00390000007685 #11	ENSGT01020000230401.b.a #12	ENSGT00940000158637 #13	ENSGT00940000156566 #14	ENSGT00940000162483 #16	ENSGT00950000182885.B #17	ENSGT00950000182885.C.b ##17	ENSGT00940000159081 #18	ENSGT00390000004984 #19	ENSGT00390000006088 #20	ENSGT00390000010777 #21	ENSGT00390000014084 #22	ENSGT01030000234578.B.a #23	ENSGT00390000006747 #24	ENSGT00390000000062 #25	ENSGT00950000183117.a.a #26	ENSGT00940000158254 #27	ENSGT00940000155067.a #28	ENSGT00940000154649.B	ENSGT00940000157903	ENSGT00940000157742	ENSGT00530000063472.b.b.a.a	ENSGT00950000182881.a.a.a	ENSGT00940000158632	ENSGT00940000159863	ENSGT00940000155961	ENSGT00940000165307.d
Neognathae_b	ANCESTRAL SPECIES	2	ENSGT00940000154917 #7	ENSGT00940000160733 #8	ENSGT00940000158078 #9	ENSGT00390000000987 #10	ENSGT00390000007685 #11	ENSGT01020000230401.b.a #12	ENSGT00940000158637 #13	ENSGT00940000156566 #14	ENSGT00940000162483 #16	ENSGT00950000182885.B #17	ENSGT00950000182885.C.b ##17	ENSGT00940000159081 #18	ENSGT00390000004984 #19	ENSGT00390000006088 #20	ENSGT00390000010777 #21	ENSGT00390000014084 #22	ENSGT01030000234578.B.a #23	ENSGT00390000006747 #24	ENSGT00390000000062 #25	ENSGT00950000183117.a.a #26	ENSGT00940000158254 #27	ENSGT00940000155067.a #28	ENSGT00940000154649.B	ENSGT00940000157903	ENSGT00940000157742	ENSGT00530000063472.b.b.a.a	ENSGT00950000182881.a.a.a	ENSGT00940000158632	ENSGT00940000159863	ENSGT00940000155961	ENSGT00940000165307.d
Neognathae_c	ANCESTRAL SPECIES		ENSGT00940000154917 #7	ENSGT00940000160733 #8	ENSGT00940000158078 #9	ENSGT00390000000987 #10	ENSGT00390000007685 #11	ENSGT01020000230401.b.a #12	ENSGT00940000158637 #13	ENSGT00940000156566 #14	ENSGT00940000162483 #16	ENSGT00950000182885.B #17	ENSGT00950000182885.C.b ##17	ENSGT00940000159081 #18	ENSGT00390000004984 #19	ENSGT00390000006088 #20	ENSGT00390000010777 #21	ENSGT00390000014084 #22	ENSGT01030000234578.B.a #23	ENSGT00390000006747 #24	ENSGT00390000000062 #25	ENSGT00950000183117.a.a #26	ENSGT00940000158254 #27	ENSGT00940000155067.a #28	ENSGT00940000154649.B	ENSGT00940000157903	ENSGT00940000157742	ENSGT00530000063472.b.b.a.a	ENSGT00950000182881.a.a.a	ENSGT00940000158632	ENSGT00940000159863	ENSGT00940000155961	ENSGT00940000165307.d
Golden eagle	MODERN SPECIES	8	NFYB (ENSACCG00020007673) #7	HCFC2 (ENSACCG00020005745) #8	GLT8D2 (ENSACCG00020005771) #9	TDG (ENSACCG00020005791) #10	UQCC6 (ENSACCG00020005802) #11	HSP90B1 (ENSACCG00020005821) #12	NT5DC3 (ENSACCG00020005845) #13	STAB2 (ENSACCG00020006310) #14	ASCL1 (ENSACCG00020006727) #16	PAH (ENSACCG00020006744) #17	ENSACCG00020006790 ##17	IGF1 (ENSACCG00020006825) #18	PMCH (ENSACCG00020006843) #19	PARPBP (ENSACCG00020006868) #20	NUP37 (ENSACCG00020006894) #21	WASHC3 (ENSACCG00020006913) #22	DRAM1 (ENSACCG00020006928) #23	GNPTAB (ENSACCG00020006955) #24	ENSACCG00020006985 #25	CHPT1 (ENSACCG00020007007) #26	MYBPC1 (ENSACCG00020007046) #27	SPIC (ENSACCG00020007075) #28	PARP12 (ENSACCG00020007090)	TBXAS1 (ENSACCG00020007111)	HIPK2 (ENSACCG00020007136)	KIAA1549 (ENSACCG00020007178)	ATP6V0A4 (ENSACCG00020007216)	SVOPL (ENSACCG00020007239)	TRIM24 (ENSACCG00020007263)	AKR1D1 (ENSACCG00020007295)	ENSACCG00020007316
Kakapo	MODERN SPECIES	20	NFYB (ENSSHBG00005015584) #7	HCFC2 (ENSSHBG00005015579) #8	GLT8D2 (ENSSHBG00005015572) #9	TDG (ENSSHBG00005015569) #10	UQCC6 (ENSSHBG00005015567) #11	HSP90B1 (ENSSHBG00005015564) #12	NT5DC3 (ENSSHBG00005015509) #13	STAB2 (ENSSHBG00005014884) #14	ASCL1 (ENSSHBG00005014752) #16	PAH (ENSSHBG00005014742) #17	ENSSHBG00005014728 ##17	IGF1 (ENSSHBG00005014720) #18	PMCH (ENSSHBG00005014714) #19	PARPBP (ENSSHBG00005014699) #20	NUP37 (ENSSHBG00005014683) #21	WASHC3 (ENSSHBG00005014673) #22	DRAM1 (ENSSHBG00005014665) #23	GNPTAB (ENSSHBG00005014613) #24	ENSSHBG00005014657 #25	CHPT1 (ENSSHBG00005014575) #26	MYBPC1 (ENSSHBG00005014492) #27	SPIC (ENSSHBG00005014479) #28	ENSSHBG00005014464	ENSSHBG00005014453	TBXAS1 (ENSSHBG00005014330)	HIPK2 (ENSSHBG00005014298)	KIAA1549 (ENSSHBG00005014276)	ATP6V0A4 (ENSSHBG00005013208)	SVOPL (ENSSHBG00005013130)	TRIM24 (ENSSHBG00005013107)	AKR1D1 (ENSSHBG00005013085)
Passeriformes	ANCESTRAL SPECIES	3	ENSGT00940000154917 #7	ENSGT00940000160733 #8	ENSGT00940000158078 #9	ENSGT00390000000987 #10	ENSGT00390000007685 #11	ENSGT01020000230401.b.a #12	ENSGT00940000158637 #13	ENSGT00940000156566 #14	ENSGT00940000162483 #16	ENSGT00950000182885.B #17	ENSGT00950000182885.C.b ##17	ENSGT00940000159081 #18	ENSGT00390000004984 #19	ENSGT00390000006088 #20	ENSGT00390000010777 #21	ENSGT00390000014084 #22	ENSGT01030000234578.B.a #23	ENSGT00390000006747 #24	ENSGT00390000000062 #25	ENSGT00950000183117.a.a #26	ENSGT00940000158254 #27	ENSGT00940000155067.a #28	ENSGT00940000154649.B	ENSGT00940000157903	ENSGT00940000157742	ENSGT00530000063472.b.b.a.a	ENSGT00950000182881.a.a.a	ENSGT00940000158632	ENSGT00940000158027	ENSGT00940000158848	ENSGT00940000153438.b
Great tit	MODERN SPECIES	10	NFYB (ENSPMJG00000008831) #7	HCFC2 (ENSPMJG00000008832) #8	GLT8D2 (ENSPMJG00000008835) #9	TDG (ENSPMJG00000008836) #10	UQCC6 (ENSPMJG00000008838) #11	HSP90B1 (ENSPMJG00000008839) #12	NT5DC3 (ENSPMJG00000008841) #13	STAB2 (ENSPMJG00000008842) #14	ASCL1 (ENSPMJG00000008887) #16	PAH (ENSPMJG00000008888) #17	ENSPMJG00000008890 ##17	IGF1 (ENSPMJG00000008896) #18	PARPBP (ENSPMJG00000008897) #20	PMCH (ENSPMJG00000008901) #19	NUP37 (ENSPMJG00000008905) #21	WASHC3 (ENSPMJG00000008907) #22	DRAM1 (ENSPMJG00000008909) #23	GNPTAB (ENSPMJG00000008910) #24	ENSPMJG00000008913 #25	CHPT1 (ENSPMJG00000008915) #26	MYBPC1 (ENSPMJG00000008917) #27	SPIC (ENSPMJG00000008925) #28	PARP12 (ENSPMJG00000008926)	TBXAS1 (ENSPMJG00000008927)	HIPK2 (ENSPMJG00000008932)	KIAA1549 (ENSPMJG00000008938)	ATP6V0A4 (ENSPMJG00000008940)	SVOPL (ENSPMJG00000008942)	TMTC1 (ENSPMJG00000008945)	IPO8 (ENSPMJG00000008947)	CAPRIN2 (ENSPMJG00000008948)
Passeriformes_d	ANCESTRAL SPECIES	3	ENSGT00940000154917 #7	ENSGT00940000160733 #8	ENSGT00940000158078 #9	ENSGT00390000000987 #10	ENSGT00390000007685 #11	ENSGT01020000230401.b.a #12	ENSGT00940000158637 #13	ENSGT00940000156566 #14	ENSGT00940000162483 #16	ENSGT00950000182885.B #17	ENSGT00950000182885.C.b ##17	ENSGT00940000159081 #18	ENSGT00390000004984 #19	ENSGT00390000006088 #20	ENSGT00390000010777 #21	ENSGT00390000014084 #22	ENSGT01030000234578.B.a #23	ENSGT00390000006747 #24	ENSGT00390000000062 #25	ENSGT00950000183117.a.a #26	ENSGT00940000158254 #27	ENSGT00940000155067.a #28	ENSGT00940000154649.B	ENSGT00940000157903	ENSGT00940000157742	ENSGT00530000063472.b.b.a.a	ENSGT00950000182881.a.a.a	ENSGT00940000158632	ENSGT00940000158027	ENSGT00940000158848	ENSGT00940000153438.b
Passeriformes_g	ANCESTRAL SPECIES	4	ENSGT00940000154917 #7	ENSGT00940000160733 #8	ENSGT00940000158078 #9	ENSGT00390000000987 #10	ENSGT00390000007685 #11	ENSGT01020000230401.b.a #12	ENSGT00940000158637 #13	ENSGT00940000156566 #14	ENSGT00940000162483 #16	ENSGT00950000182885.B #17	ENSGT00950000182885.C.b ##17	ENSGT00940000159081 #18	ENSGT00390000004984 #19	ENSGT00390000006088 #20	ENSGT00390000010777 #21	ENSGT00390000014084 #22	ENSGT01030000234578.B.a #23	ENSGT00390000006747 #24	ENSGT00390000000062 #25	ENSGT00950000183117.a.a #26	ENSGT00940000158254 #27	ENSGT00940000155067.a #28	ENSGT00940000154649.B	ENSGT00940000157903	ENSGT00940000157742	ENSGT00530000063472.b.b.a.a	ENSGT00950000182881.a.a.a	ENSGT00940000158632	ENSGT00940000158027	ENSGT00940000158848	ENSGT00940000153438.b
Passeroidea	ANCESTRAL SPECIES	3	ENSGT00940000160733 #8	ENSGT00940000158078 #9	ENSGT00390000000987 #10	ENSGT00940000173873	ENSGT01020000230401.b.a #12	ENSGT00390000007685 #11	ENSGT00940000158637 #13	ENSGT00940000156566 #14	ENSGT00940000162483 #16	ENSGT00950000182885.B #17	ENSGT00950000182885.C.b ##17	ENSGT00940000159081 #18	ENSGT00390000004984 #19	ENSGT00390000006088 #20	ENSGT00390000010777 #21	ENSGT00390000014084 #22	ENSGT01030000234578.B.a #23	ENSGT00390000006747 #24	ENSGT00390000000062 #25	ENSGT00950000183117.a.a #26	ENSGT00940000158254 #27	ENSGT00940000155067.a #28	ENSGT00940000154649.B	ENSGT00940000157903	ENSGT00940000157742	ENSGT00530000063472.b.b.a.a	ENSGT00950000182881.a.a.a	ENSGT00940000158632	ENSGT00940000158027	ENSGT00940000158848	ENSGT00940000153438.b
Zebra finch	MODERN SPECIES	11	NFYB (ENSTGUG00000026387) #7	HCFC2 (ENSTGUG00000011162) #8	GLT8D2 (ENSTGUG00000011166) #9	TDG (ENSTGUG00000011175) #10	HSP90B1 (ENSTGUG00000011181) #12	UQCC6 (ENSTGUG00000011180) #11	NT5DC3 (ENSTGUG00000011210) #13	STAB2 (ENSTGUG00000011216) #14	ASCL1 (ENSTGUG00000011251) #16	PAH (ENSTGUG00000011254) #17	ENSTGUG00000011270 ##17	IGF1 (ENSTGUG00000028086) #18	PMCH (ENSTGUG00000011291) #19	PARPBP (ENSTGUG00000011294) #20	NUP37 (ENSTGUG00000011296) #21	WASHC3 (ENSTGUG00000027168) #22	DRAM1 (ENSTGUG00000011306) #23	GNPTAB (ENSTGUG00000011324) #24	ENSTGUG00000011340 #25	CHPT1 (ENSTGUG00000011346) #26	MYBPC1 (ENSTGUG00000011307) #27	SPIC (ENSTGUG00000011352) #28	PARP12 (ENSTGUG00000011354)	TBXAS1 (ENSTGUG00000011367)	HIPK2 (ENSTGUG00000011378)	KIAA1549 (ENSTGUG00000011403)	ATP6V0A4 (ENSTGUG00000011411)	SVOPL (ENSTGUG00000011429)	TMTC1 (ENSTGUG00000011441)	IPO8 (ENSTGUG00000011446)	CAPRIN2 (ENSTGUG00000011456)
Common canary	MODERN SPECIES	26	ENSSCAG00000010475	ENSSCAG00000010469	MRPS35 (ENSSCAG00000010464)	MANSC4 (ENSSCAG00000010458)	KLHL42 (ENSSCAG00000010455)	PTHLH (ENSSCAG00000010451)	CCDC91 (ENSSCAG00000010441)	NT5DC3 (ENSSCAG00000010419) #13	STAB2 (ENSSCAG00000010322) #14	PAH (ENSSCAG00000010292) #17	ENSSCAG00000010278 ##17	IGF1 (ENSSCAG00000010272) #18	PMCH (ENSSCAG00000010270) #19	PARPBP (ENSSCAG00000010265) #20	NUP37 (ENSSCAG00000010258) #21	WASHC3 (ENSSCAG00000010257) #22	DRAM1 (ENSSCAG00000010256) #23	GNPTAB (ENSSCAG00000010247) #24	ENSSCAG00000010235 #25	CHPT1 (ENSSCAG00000010231) #26	MYBPC1 (ENSSCAG00000010208) #27	SPIC (ENSSCAG00000010197) #28	PARP12 (ENSSCAG00000010191)	TBXAS1 (ENSSCAG00000010186)	HIPK2 (ENSSCAG00000010181)	KIAA1549 (ENSSCAG00000010145)	ATP6V0A4 (ENSSCAG00000010129)	SVOPL (ENSSCAG00000010120)	TMTC1 (ENSSCAG00000010112)	IPO8 (ENSSCAG00000010099)	CAPRIN2 (ENSSCAG00000010077)
Medium ground finch	MODERN SPECIES	29	CREBL2 (ENSGFOG00000008611)	GPR19 (ENSGFOG00000008618)	CDKN1B (ENSGFOG00000008622)	MRPS35 (ENSGFOG00000008627)	MANSC4 (ENSGFOG00000008633)	PTHLH (ENSGFOG00000008638)	CCDC91 (ENSGFOG00000008642)	NT5DC3 (ENSGFOG00000008685) #13	STAB2 (ENSGFOG00000009141) #14	PAH (ENSGFOG00000010386) #17	ENSGFOG00000010405 ##17	IGF1 (ENSGFOG00000010423) #18	PARPBP (ENSGFOG00000010434) #20	PMCH (ENSGFOG00000010450) #19	NUP37 (ENSGFOG00000010455) #21	WASHC3 (ENSGFOG00000010466) #22	DRAM1 (ENSGFOG00000010470) #23	GNPTAB (ENSGFOG00000010479) #24	ENSGFOG00000010504 #25	CHPT1 (ENSGFOG00000010508) #26	MYBPC1 (ENSGFOG00000010523) #27	SPIC (ENSGFOG00000010609) #28	PARP12 (ENSGFOG00000010615)	TBXAS1 (ENSGFOG00000010619)	HIPK2 (ENSGFOG00000010628)	KIAA1549 (ENSGFOG00000010659)	ENSGFOG00000005176	ATP6V0A4 (ENSGFOG00000005547)	SVOPL (ENSGFOG00000005653)	TMTC1 (ENSGFOG00000005672)	IPO8 (ENSGFOG00000005713)
Flycatcher	MODERN SPECIES	10	NFYB (ENSFALG00000024616) #7	ENSFALG00000023908	HCFC2 (ENSFALG00000000568) #8	GLT8D2 (ENSFALG00000000570) #9	TDG (ENSFALG00000000571) #10	UQCC6 (ENSFALG00000028422) #11	HSP90B1 (ENSFALG00000000575) #12	NT5DC3 (ENSFALG00000000580) #13	STAB2 (ENSFALG00000000590) #14	PAH (ENSFALG00000009112) #17	ENSFALG00000009097 ##17	IGF1 (ENSFALG00000009094) #18	PARPBP (ENSFALG00000027535) #20	PMCH (ENSFALG00000009091) #19	NUP37 (ENSFALG00000009083) #21	WASHC3 (ENSFALG00000028020) #22	DRAM1 (ENSFALG00000025989) #23	GNPTAB (ENSFALG00000009076) #24	SYCP3 (ENSFALG00000025063) #25	CHPT1 (ENSFALG00000009071) #26	MYBPC1 (ENSFALG00000009067) #27	SPIC (ENSFALG00000026234) #28	PARP12 (ENSFALG00000025822)	ENSFALG00000009059	HIPK2 (ENSFALG00000009056)	KIAA1549 (ENSFALG00000009055)	ENSFALG00000009051	SVOPL (ENSFALG00000009045)	TMTC1 (ENSFALG00000009042)	IPO8 (ENSFALG00000009039)	CAPRIN2 (ENSFALG00000009038)
Galloanserae	ANCESTRAL SPECIES	3	ENSGT00940000154917 #7	ENSGT00940000160733 #8	ENSGT00940000158078 #9	ENSGT00390000000987 #10	ENSGT00390000007685 #11	ENSGT01020000230401.b.a #12	ENSGT00940000158637 #13	ENSGT00940000156566 #14	ENSGT00940000162483 #16	ENSGT00950000182885.B #17	ENSGT00950000182885.C.b ##17	ENSGT00940000159081 #18	ENSGT00390000004984 #19	ENSGT00390000006088 #20	ENSGT00390000010777 #21	ENSGT00390000014084 #22	ENSGT01030000234578.B.a #23	ENSGT00390000006747 #24	ENSGT00390000000062 #25	ENSGT00950000183117.a.a #26	ENSGT00940000158254 #27	ENSGT00940000155067.a #28	ENSGT00940000154649.B	ENSGT00940000157903	ENSGT00940000157742	ENSGT00530000063472.b.b.a.a	ENSGT00950000182881.a.a.a	ENSGT00940000158632	ENSGT00940000159863	ENSGT00940000155961	ENSGT00940000165307.d
Anatidae	ANCESTRAL SPECIES	8	ENSGT00940000154917 #7	ENSGT00940000160733 #8	ENSGT00940000158078 #9	ENSGT00390000000987 #10	ENSGT00390000007685 #11	ENSGT01020000230401.b.a #12	ENSGT00940000158637 #13	ENSGT00940000156566 #14	ENSGT00940000162483 #16	ENSGT00950000182885.B #17	ENSGT00950000182885.C.b ##17	ENSGT00940000159081 #18	ENSGT00390000004984 #19	ENSGT00390000006088 #20	ENSGT00390000010777 #21	ENSGT00390000014084 #22	ENSGT01030000234578.B.a #23	ENSGT00390000006747 #24	ENSGT00390000000062 #25	ENSGT00950000183117.a.a #26	ENSGT00940000158254 #27	ENSGT00940000155067.a #28	ENSGT00940000154649.B	ENSGT00940000157903	ENSGT00940000157742	ENSGT00530000063472.b.b.a.a	ENSGT00950000182881.a.a.a	ENSGT00940000158632	ENSGT00940000159863	ENSGT00940000155961	ENSGT00940000165307.d
Pink-footed goose	MODERN SPECIES	24																WASHC3 (ENSABRG00000007874) #22	DRAM1 (ENSABRG00000007867) #23	GNPTAB (ENSABRG00000007785) #24	ENSABRG00000007770 #25	CHPT1 (ENSABRG00000007749) #26	MYBPC1 (ENSABRG00000006470) #27	SPIC (ENSABRG00000006376) #28	PARP12 (ENSABRG00000006361)	TBXAS1 (ENSABRG00000006299)	HIPK2 (ENSABRG00000006197)	KIAA1549 (ENSABRG00000006155)	ATP6V0A4 (ENSABRG00000005595)	SVOPL (ENSABRG00000005492)	TRIM24 (ENSABRG00000005474)	AKR1D1 (ENSABRG00000005459)	ENSABRG00000005418
Duck	MODERN SPECIES		CHST11 (ENSAPLG00000007984)	TXNRD1 (ENSAPLG00000007200)	NFYB (ENSAPLG00000007166) #7	HCFC2 (ENSAPLG00000007046) #8	GLT8D2 (ENSAPLG00000006875) #9	TDG (ENSAPLG00000006522) #10	HSP90B1 (ENSAPLG00000014678) #12	NT5DC3 (ENSAPLG00000013737) #13	STAB2 (ENSAPLG00000011843) #14	PAH (ENSAPLG00000011061) #17	ENSAPLG00000010733 ##17	IGF1 (ENSAPLG00000010676) #18	PMCH (ENSAPLG00000010619) #19	PARPBP (ENSAPLG00000010548) #20	NUP37 (ENSAPLG00000013225) #21	WASHC3 (ENSAPLG00000018769) #22	DRAM1 (ENSAPLG00000016221) #23	GNPTAB (ENSAPLG00000016228) #24	ENSAPLG00000001471 #25	CHPT1 (ENSAPLG00000001976) #26	MYBPC1 (ENSAPLG00000007103) #27	SPIC (ENSAPLG00000007075) #28	PARP12 (ENSAPLG00000006979)	TBXAS1 (ENSAPLG00000006656)	HIPK2 (ENSAPLG00000006030)	KIAA1549 (ENSAPLG00000005594)	ATP6V0A4 (ENSAPLG00000004825)	SVOPL (ENSAPLG00000004468)	TRIM24 (ENSAPLG00000003731)	AKR1D1 (ENSAPLG00000002867)	ENSAPLG00000016444
Phasianidae	ANCESTRAL SPECIES		ENSGT00940000154917 #7	ENSGT00940000160733 #8	ENSGT00940000158078 #9	ENSGT00390000000987 #10	ENSGT00390000007685 #11	ENSGT01020000230401.b.a #12	ENSGT00940000158637 #13	ENSGT00940000156566 #14	ENSGT00940000162483 #16	ENSGT00950000182885.B #17	ENSGT00950000182885.C.b ##17	ENSGT00940000159081 #18	ENSGT00390000004984 #19	ENSGT00390000006088 #20	ENSGT00390000010777 #21	ENSGT00390000014084 #22	ENSGT01030000234578.B.a #23	ENSGT00390000006747 #24	ENSGT00390000000062 #25	ENSGT00950000183117.a.a #26	ENSGT00940000158254 #27	ENSGT00940000155067.a #28	ENSGT00940000154649.B	ENSGT00940000157903.c	ENSGT00940000157742	ENSGT00530000063472.b.b.a.a	ENSGT00950000182881.a.a.a	ENSGT00940000158632	ENSGT00940000159863	ENSGT00940000155961	ENSGT00940000165307.d
Phasianidae_b	ANCESTRAL SPECIES		ENSGT00940000159167	ENSGT00940000160180	ENSGT00940000154917 #7	ENSGT00940000160733 #8	ENSGT00940000158078 #9	ENSGT00390000000987 #10	ENSGT00390000007685 #11	ENSGT01020000230401.b.a #12	ENSGT00940000158637 #13	ENSGT00940000156566 #14	ENSGT00940000162483 #16	ENSGT00950000182885.B #17	ENSGT00950000182885.C.b ##17	ENSGT00940000159081 #18	ENSGT00390000010777 #21	ENSGT00390000014084 #22	ENSGT01030000234578.B.a #23	ENSGT00390000006747 #24	ENSGT00390000000062 #25	ENSGT00950000183117.a.a #26	ENSGT00940000158254 #27	ENSGT00940000155067.a #28	ENSGT00940000154649.B	ENSGT00940000157903.c	ENSGT00940000157742	ENSGT00530000063472.b.b.a.a	ENSGT00950000182881.a.a.a	ENSGT00940000158632	ENSGT00940000159863	ENSGT00940000155961	ENSGT00940000165307.d
Chicken	MODERN SPECIES		NFYB (ENSGALG00010011856) #7	HCFC2 (ENSGALG00010011883) #8	GLT8D2 (ENSGALG00010010071) #9	TDG (ENSGALG00010010085) #10	C12orf73 (ENSGALG00010010095) #11	HSP90B1 (ENSGALG00010010280) #12	NT5DC3 (ENSGALG00010010310) #13	STAB2 (ENSGALG00010010356) #14	ASCL1 (ENSGALG00010011057) #16	PAH (ENSGALG00010010222) #17	ENSGALG00010010248 ##17	IGF1 (ENSGALG00010010259) #18	PARPBP (ENSGALG00010011316) #20	PMCH (ENSGALG00010011331) #19	NUP37 (ENSGALG00010011361) #21	WASHC3 (ENSGALG00010011425) #22	DRAM1 (ENSGALG00010011431) #23	GNPTAB (ENSGALG00010011453) #24	ENSGALG00010011457 #25	CHPT1 (ENSGALG00010011484) #26	MYBPC1 (ENSGALG00010011558) #27	SPIC (ENSGALG00010011308) #28	PARP12 (ENSGALG00010013063)	TBXAS1 (ENSGALG00010013152)	HIPK2 (ENSGALG00010013175)	KIAA1549 (ENSGALG00010013209)	ATP6V0A4 (ENSGALG00010013224)	SVOPL (ENSGALG00010013237)	TRIM24 (ENSGALG00010013244)	AKR1D1 (ENSGALG00010013290)	ENSGALG00010013309
Turkey	MODERN SPECIES		ENSMGAG00000022285	ENSMGAG00000021965	ENSMGAG00000013126	ENSMGAG00000013129	ENSMGAG00000013120	ENSMGAG00000018959	ENSMGAG00000013110	ENSMGAG00000013115	ENSMGAG00000013107 #28	ENSMGAG00000013091 #27	ENSMGAG00000020293 #27	ENSMGAG00000013104 #26	ENSMGAG00000013102 #25	ENSMGAG00000013082 #24	ENSMGAG00000013080 #23	ENSMGAG00000013076 #22	ENSMGAG00000021927	ENSMGAG00000013073 #21	ENSMGAG00000019796 #20	ENSMGAG00000013069 #19	ENSMGAG00000013071 #20	IGF1 (ENSMGAG00000013066) #18	ENSMGAG00000013054 #17	ENSMGAG00000019089 #17	ENSMGAG00000018216	ENSMGAG00000013025 #14	ENSMGAG00000013019 #13	ENSMGAG00000013643	ENSMGAG00000018330	ENSMGAG00000013635	GOLT1B (ENSMGAG00000013634)
Japanese quail	MODERN SPECIES		MGST1 (ENSCJPG00005002936)	SLC15A5 (ENSCJPG00005002928)	DERA (ENSCJPG00005002923)	STRAP (ENSCJPG00005002917)	EPS8 (ENSCJPG00005002898)	PTPRO (ENSCJPG00005002879)	NT5DC3 (ENSCJPG00005002866) #13	STAB2 (ENSCJPG00005000083) #14	ASCL1 (ENSCJPG00005020359) #16	PAH (ENSCJPG00005020356) #17	ENSCJPG00005020354 ##17	IGF1 (ENSCJPG00005020352) #18	PMCH (ENSCJPG00005020351) #19	PARPBP (ENSCJPG00005020349) #20	NUP37 (ENSCJPG00005020348) #21	WASHC3 (ENSCJPG00005020347) #22	DRAM1 (ENSCJPG00005020344) #23	GNPTAB (ENSCJPG00005020341) #24	ENSCJPG00005020340 #25	CHPT1 (ENSCJPG00005020339) #26	MYBPC1 (ENSCJPG00005020301) #27	SPIC (ENSCJPG00005020299) #28	PARP12 (ENSCJPG00005020298)	TBXAS1 (ENSCJPG00005020297)	HIPK2 (ENSCJPG00005020296)	KIAA1549 (ENSCJPG00005020295)	ATP6V0A4 (ENSCJPG00005020294)	SVOPL (ENSCJPG00005020293)	TRIM24 (ENSCJPG00005020292)	AKR1D1 (ENSCJPG00005020290)	ENSCJPG00005020289
African ostrich	MODERN SPECIES	771	ENSSCUG00000009577	NFYB (ENSSCUG00000009573) #7	HCFC2 (ENSSCUG00000009566) #8	GLT8D2 (ENSSCUG00000009560) #9	TDG (ENSSCUG00000009556) #10	UQCC6 (ENSSCUG00000018172) #11	HSP90B1 (ENSSCUG00000018116) #12	NT5DC3 (ENSSCUG00000018012) #13	STAB2 (ENSSCUG00000017899) #14	PAH (ENSSCUG00000017854) #17	ENSSCUG00000017853 ##17	IGF1 (ENSSCUG00000017849) #18	PMCH (ENSSCUG00000017846) #19	PARPBP (ENSSCUG00000017841) #20	NUP37 (ENSSCUG00000017835) #21	WASHC3 (ENSSCUG00000017833) #22	DRAM1 (ENSSCUG00000017831) #23	GNPTAB (ENSSCUG00000017826) #24	ENSSCUG00000017821 #25	CHPT1 (ENSSCUG00000017818) #26	MYBPC1 (ENSSCUG00000017759) #27	SPIC (ENSSCUG00000017737) #28	PARP12 (ENSSCUG00000017734)	TBXAS1 (ENSSCUG00000017729)	HIPK2 (ENSSCUG00000017723)	KIAA1549 (ENSSCUG00000017719)	ENSSCUG00000017717	ENSSCUG00000017716	SVOPL (ENSSCUG00000017715)	TRIM24 (ENSSCUG00000017713)	AKR1D1 (ENSSCUG00000017707)
Anura	ANCESTRAL SPECIES		ENSGT00940000160733 #8	ENSGT00940000158078 #9	ENSGT00390000000987 #10	ENSGT00390000007685 #11	ENSGT01020000230401.b.a #12	ENSGT00530000064216	ENSGT00940000158637 #13	ENSGT00940000156566 #14	ENSGT00940000162483 #16	ENSGT00950000182885.B #17	ENSGT00950000182885.C.b ##17	ENSGT00940000159081 #18	ENSGT00390000004984 #19	ENSGT00390000006088 #20	ENSGT00390000010777 #21	ENSGT00390000014084 #22	ENSGT01030000234578.B.a #23	ENSGT00390000006747 #24	ENSGT00390000000062 #25	ENSGT00950000183117.a.a #26	ENSGT00940000158254 #27	ENSGT00940000155067.a #28	ENSGT00940000155118 #29	ENSGT00390000016813 #30	ENSGT00940000155166.A.g #31	ENSGT00940000155166.A.h #31	ENSGT00940000158600 #32	ENSGT00940000159389 #34	ENSGT00940000158037 #35	ENSGT00940000158187 #36	ENSGT00880000138031 #37
Frog	MODERN SPECIES	3	dguok (ENSXETG00000045569)	glt8d2 (ENSXETG00000019636) #9	tdg (ENSXETG00000025927) #10	eral1 (ENSXETG00000019633)	th2 (ENSXETG00000047373) ##17	ascl1 (ENSXETG00000041303) #16	stab2 (ENSXETG00000005356) #14	nt5dc3 (ENSXETG00000005357) #13	ENSXETG00000005358	hsp90b1 (ENSXETG00000005359) #12	c12orf73 (ENSXETG00000037197) #11	igf1 (ENSXETG00000002532) #18	pmch (ENSXETG00000030934) #19	parpbp (ENSXETG00000002534) #20	nup37 (ENSXETG00000002535) #21	washc3 (ENSXETG00000039010) #22	dram1 (ENSXETG00000027990) #23	gnptab (ENSXETG00000032085) #24	chpt1 (ENSXETG00000002538) #26	mybpc1 (ENSXETG00000032982) #27	SPIC (ENSXETG00000038663) #28	arl1 (ENSXETG00000002540) #29	utp20 (ENSXETG00000032346) #30	slc5a8.1 (ENSXETG00000002542) #31	ENSXETG00000031274 #31	ano4 (ENSXETG00000031739) #32	gas2l3 (ENSXETG00000032845) #34	nr1h4 (ENSXETG00000030372) #35	slc17a8 (ENSXETG00000033364) #36	scyl2 (ENSXETG00000006690) #37	depdc4 (ENSXETG00000041023)
Leishan spiny toad	MODERN SPECIES	6	ENSLLEG00000006623	STAB2 (ENSLLEG00000006277) #14	ENSLLEG00000006245	ENSLLEG00000006231	ENSLLEG00000006214	ASCL1 (ENSLLEG00000006188) #16	ENSLLEG00000006163	ENSLLEG00000006154	PAH (ENSLLEG00000005856) #17	ENSLLEG00000005773 ##17	ENSLLEG00000019404	IGF1 (ENSLLEG00000019357) #18	PMCH (ENSLLEG00000019305) #19	PARPBP (ENSLLEG00000019220) #20	NUP37 (ENSLLEG00000019115) #21	WASHC3 (ENSLLEG00000019023) #22	DRAM1 (ENSLLEG00000018892) #23	GNPTAB (ENSLLEG00000018464) #24	ENSLLEG00000018360 #25	CHPT1 (ENSLLEG00000018242) #26	MYBPC1 (ENSLLEG00000016437) #27	SPIC (ENSLLEG00000016280) #28	ENSLLEG00000016253	ARL1 (ENSLLEG00000016133) #29	ENSLLEG00000016106	UTP20 (ENSLLEG00000015630) #30	ENSLLEG00000015204 #31	ENSLLEG00000014952 #31	ANO4 (ENSLLEG00000014143) #32	GAS2L3 (ENSLLEG00000014031) #34	NR1H4 (ENSLLEG00000013967) #35
Coelacanth	MODERN SPECIES	2307															NUP37 (ENSLACG00000001453) #21	WASHC3 (ENSLACG00000005008) #22	GNPTAB (ENSLACG00000006565) #24	sycp3 (ENSLACG00000022478) #25
Actinopterygii	ANCESTRAL SPECIES	44	ENSGT00940000154572	ENSGT00940000157710	ENSGT00390000018647	ENSGT00940000157835	ENSGT00720000108833	ENSGT00950000182976.a.a	ENSGT00880000138031 #37	ENSGT01000000214676	ENSGT00940000162483 #16	ENSGT00950000182885.B #17	ENSGT00950000182885.C.b ##17	ENSGT00940000159081 #18	ENSGT00390000004984 #19	ENSGT00390000006088 #20	ENSGT00390000010777 #21	ENSGT00390000014084 #22	ENSGT01030000234578.B.a #23	ENSGT00390000006747 #24	ENSGT00950000183117.a.a #26	ENSGT00940000158254 #27	ENSGT00940000155067.b.a ##28	ENSGT00940000155067.a #28	ENSGT00940000155118 #29	ENSGT00390000016813 #30	ENSGT00940000155166.A #31	ENSGT00940000158600 #32	ENSGT00940000159389 #34	ENSGT00940000158037 #35	ENSGT00940000158187 #36	ENSGT00390000018003.b	ENSGT00390000008702
Neopterygii	ANCESTRAL SPECIES	58	ENSGT00940000160607	ENSGT00390000010711	ENSGT00390000005294	ENSGT00940000179808	ENSGT00940000160731	ENSGT00940000156872	ENSGT00950000182952.B	ENSGT00950000183062.a.b.a	ENSGT00390000006349	ENSGT00530000064100	ENSGT00390000017353	ENSGT00940000159081 #18	ENSGT00390000004984 #19	ENSGT00390000006088 #20	ENSGT00390000010777 #21	ENSGT00390000014084 #22	ENSGT01030000234578.B.a #23	ENSGT00390000006747 #24	ENSGT00950000183117.a.a #26	ENSGT00940000158254 #27	ENSGT00940000155067.b.a ##28	ENSGT00940000155067.a #28	ENSGT00940000155118 #29	ENSGT00390000016813 #30	ENSGT00940000155166.A #31	ENSGT00940000158600 #32	ENSGT00940000159389 #34	ENSGT00940000158037 #35	ENSGT00940000158187 #36	ENSGT00390000018003.b	ENSGT00390000008702
Osteoglossocephalai	ANCESTRAL SPECIES	144							ENSGT00390000006349	ENSGT00530000064100	ENSGT00940000159081 #18	ENSGT00390000004984 #19	ENSGT00390000006088 #20	ENSGT00390000010777 #21	ENSGT00950000182885.C.b ##17	ENSGT00950000182885.B #17	ENSGT00940000166611	ENSGT00390000014084 #22	ENSGT01030000234578.B.a #23	ENSGT00390000006747 #24	ENSGT00950000183117.a.a #26	ENSGT00940000158254 #27	ENSGT00940000155067.b.a ##28	ENSGT00940000155067.a #28	ENSGT00940000155118 #29	ENSGT00390000016813 #30	ENSGT00940000155166.A #31	ENSGT00390000004708	ENSGT00390000001810.b	ENSGT00530000063722.a	ENSGT00940000170596	ENSGT00390000009532.A.d.a	ENSGT00940000156122
Clupeocephala	ANCESTRAL SPECIES	100									ENSGT00940000159081 #18	ENSGT00390000004984.b #19	ENSGT00390000006088 #20	ENSGT00390000010777 #21	ENSGT00950000182885.C.b ##17	ENSGT00950000182885.B #17	ENSGT00940000166611	ENSGT00390000014084 #22	ENSGT01030000234578.B.a #23	ENSGT00390000006747 #24	ENSGT00950000183117.a.a #26	ENSGT00940000158254 #27	ENSGT00940000155067.b.a ##28	ENSGT00940000155067.a #28	ENSGT00900000143486	ENSGT00390000016813 #30	ENSGT00940000155118 #29	ENSGT00940000155166.A #31	ENSGT00390000001810.b	ENSGT00390000004708	ENSGT00940000170596	ENSGT00390000009532.A.d.a	ENSGT00940000156122
Euteleosteomorpha	ANCESTRAL SPECIES	30	ENSGT00940000156615.a	ENSGT00940000154818	ENSGT00390000008645	ENSGT00940000158225.i.a	ENSGT00940000154983.c.b	ENSGT00940000160124	ENSGT00950000182999.b.a.a	ENSGT00390000005378	ENSGT00940000166611	ENSGT00950000182885.B #17	ENSGT00950000182885.C.b ##17	ENSGT00390000010777 #21	ENSGT00390000006088 #20	ENSGT00390000004984.b #19	ENSGT00940000159081 #18	ENSGT00390000014084 #22	ENSGT01030000234578.B.a #23	ENSGT00390000006747 #24	ENSGT00950000183117.a.a #26	ENSGT00940000158254 #27	ENSGT00940000155067.b.a ##28	ENSGT00940000155067.a #28	ENSGT00650000094663	ENSGT00390000002730.e.b	ENSGT00950000183113.b.b.c.b	ENSGT00940000160161.e.a	ENSGT00940000159401.d	ENSGT00940000153414.A	ENSGT00940000157821.h.a	ENSGT00940000160821	ENSGT00940000163946.a
Acanthomorphata	ANCESTRAL SPECIES	47																ENSGT00390000014084 #22	ENSGT01030000234578.B.a #23	ENSGT00390000006747 #24	ENSGT00950000183117.a.a #26	ENSGT00940000158254 #27	ENSGT00940000155067.b.a ##28	ENSGT00940000155067.a #28	ENSGT00650000094663	ENSGT00390000002730.e.b	ENSGT00950000183113.b.b.c.b	ENSGT00940000160161.e.a	ENSGT00940000153414.A	ENSGT00940000157821.h.a	ENSGT00940000160821	ENSGT00940000163946.a	ENSGT00940000155180.b.b
Euacanthomorphacea	ANCESTRAL SPECIES	18	ENSGT00940000154572.g.b	ENSGT00940000177480.a	ENSGT00940000154572.h	ENSGT00950000183116.a.a	ENSGT00600000084428.b	ENSGT00390000015968	ENSGT00500000045001	ENSGT00940000158466	ENSGT00950000182973.a.c.b	ENSGT00940000156720	ENSGT01030000234980	ENSGT00390000013715	ENSGT00950000183017.b.b.a.a	ENSGT00940000165434	ENSGT00940000153582.a.m.b	ENSGT00390000014084 #22	ENSGT01030000234578.B.a #23	ENSGT00390000006747 #24	ENSGT00950000183117.a.a #26	ENSGT00940000158254 #27	ENSGT00940000155067.b.a ##28	ENSGT00940000155067.a #28	ENSGT00650000094663	ENSGT00390000002730.e.b	ENSGT00950000183113.b.b.c.b	ENSGT00940000160161.e.a	ENSGT00940000153414.A	ENSGT00940000157821.h.a	ENSGT00940000160821	ENSGT00940000163946.a	ENSGT00940000155180.b.b
Percomorphaceae	ANCESTRAL SPECIES	19	ENSGT00940000154572.g.b	ENSGT00940000177480.a	ENSGT00940000154572.h	ENSGT00950000183116.a.a	ENSGT00600000084428.b	ENSGT00390000015968	ENSGT00500000045001	ENSGT00940000158466	ENSGT00950000182973.a.c.b	ENSGT00940000156720	ENSGT01030000234980	ENSGT00390000013715	ENSGT00950000183017.b.b.a.a	ENSGT00940000165434	ENSGT00940000153582.a.m.b	ENSGT00390000014084 #22	ENSGT01030000234578.B.a #23	ENSGT00390000006747 #24	ENSGT00950000183117.a.a #26	ENSGT00940000158254 #27	ENSGT00940000155067.b.a ##28	ENSGT00940000155067.a #28	ENSGT00650000094663	ENSGT00390000002730.e.b	ENSGT00950000183113.b.b.c.b	ENSGT00940000160161.e.a	ENSGT00940000153414.A	ENSGT00940000157821.h.a	ENSGT00940000160821	ENSGT00940000163946.a	ENSGT00940000155180.b.b
Percomorphaceae_B	ANCESTRAL SPECIES	21	ENSGT00940000154572.g.b	ENSGT00940000177480.a	ENSGT00940000154572.h	ENSGT00950000183116.a.a	ENSGT00600000084428.b	ENSGT00390000015968	ENSGT00500000045001	ENSGT00940000158466	ENSGT00950000182973.a.c.b	ENSGT00940000156720	ENSGT01030000234980	ENSGT00390000013715	ENSGT00950000183017.b.b.a.a	ENSGT00940000165434	ENSGT00940000153582.a.m.b	ENSGT00390000014084 #22	ENSGT01030000234578.B.a #23	ENSGT00390000006747 #24	ENSGT00950000183117.a.a #26	ENSGT00940000158254 #27	ENSGT00940000155067.b.a ##28	ENSGT00940000155067.a #28	ENSGT00650000094663	ENSGT00390000002730.e.b	ENSGT00950000183113.b.b.c.b	ENSGT00940000160161.e.a	ENSGT00940000153414.A	ENSGT00940000157821.h.a	ENSGT00940000160821	ENSGT00940000163946.a	ENSGT00940000155180.b.b
Ovalentaria	ANCESTRAL SPECIES	22	ENSGT00940000154572.g.b	ENSGT00940000177480.a	ENSGT00940000154572.h	ENSGT00600000084428.b	ENSGT00390000015968	ENSGT00500000045001	ENSGT00940000158466	ENSGT00950000182973.a.c.b	ENSGT00940000156720	ENSGT01030000234980	ENSGT00390000013715	ENSGT00950000183017.b.b.a.a	ENSGT00940000165434	ENSGT01100000263519.E.b.b	ENSGT00940000153582.a.m.b	ENSGT00390000014084 #22	ENSGT01030000234578.B.a #23	ENSGT00390000006747 #24	ENSGT00950000183117.a.a #26	ENSGT00940000158254 #27	ENSGT00940000155067.b.a ##28	ENSGT00940000155067.a #28	ENSGT00650000094663	ENSGT00390000002730.e.b	ENSGT00950000183113.b.b.c.b	ENSGT00940000160161.e.a	ENSGT00940000153414.A	ENSGT00940000157821.h.a	ENSGT00940000160821	ENSGT00940000163946.a	ENSGT00940000155180.b.b
Atherinomorphae	ANCESTRAL SPECIES	21	ENSGT00950000182976.a.a	ENSGT00940000157835	ENSGT00940000157710	ENSGT00940000154572.h	ENSGT00600000084428.b	ENSGT00390000015968	ENSGT00500000045001	ENSGT00940000158466	ENSGT00950000182973.a.c.b	ENSGT00940000156720	ENSGT01030000234980	ENSGT00390000013715	ENSGT00950000183017.b.b.a.a	ENSGT00940000165434	ENSGT00940000153582.a.m.b	ENSGT00390000014084 #22	ENSGT01030000234578.B.a #23	ENSGT00390000006747 #24	ENSGT00950000183117.a.a #26	ENSGT00940000158254 #27	ENSGT00940000155067.b.a ##28	ENSGT00940000155067.a #28	ENSGT00650000094663	ENSGT00390000002730.e.b	ENSGT00950000183113.b.b.c.b	ENSGT00940000160161.e.a	ENSGT00940000153414.A	ENSGT00940000157821.h.a	ENSGT00940000160821	ENSGT00940000163946.a	ENSGT00940000155180.b.b
Cyprinodontiformes	ANCESTRAL SPECIES	19	ENSGT00950000182976.a.a	ENSGT00940000157835	ENSGT00940000157710	ENSGT00940000154572.h	ENSGT00600000084428.b	ENSGT00390000015968	ENSGT00500000045001	ENSGT00940000158466	ENSGT00950000182973.a.c.b	ENSGT00940000156720	ENSGT01030000234980	ENSGT00390000013715	ENSGT00950000183017.b.b.a.a	ENSGT00940000165434	ENSGT01100000263519.E.b.b	ENSGT00390000014084 #22	ENSGT01030000234578.B.a #23	ENSGT00390000006747 #24	ENSGT00950000183117.a.a #26	ENSGT00940000158254 #27	ENSGT00940000155067.b.a ##28	ENSGT00940000155067.a #28	ENSGT00650000094663	ENSGT00390000002730.e.b	ENSGT00950000183113.b.b.c.b	ENSGT00940000160161.e.a	ENSGT00940000153414.A	ENSGT00940000157821.h.a	ENSGT00940000160821	ENSGT00940000163946.a	ENSGT00940000155180.b.b
Aplocheiloidei	ANCESTRAL SPECIES	14	ENSGT00880000138031 #37	ENSGT00950000182976.a.a	ENSGT00940000157835	ENSGT00940000157710	ENSGT00940000154572.h	ENSGT00600000084428.b	ENSGT00390000015968	ENSGT00500000045001	ENSGT00940000158466	ENSGT00950000182973.a.c.b	ENSGT00940000156720	ENSGT00390000013715	ENSGT00950000183017.b.b.a.a	ENSGT00940000165434	ENSGT00940000153582.a.m.b	ENSGT00390000014084 #22	ENSGT01030000234578.B.a #23	ENSGT00390000006747 #24	ENSGT00950000183117.a.a #26	ENSGT00940000158254 #27	ENSGT00940000155067.b.a ##28	ENSGT00940000155067.a #28	ENSGT00390000002730.e.b	ENSGT00950000183113.b.b.c.b	ENSGT00940000160161.e.a	ENSGT00940000153414.A	ENSGT00940000157821.h.a	ENSGT00940000160821	ENSGT00940000163946.a	ENSGT00940000155180.b.b	ENSGT00940000165907
Mangrove rivulus	MODERN SPECIES	19	si:ch211-244b2.3 (ENSKMAG00000009347)	scyl2 (ENSKMAG00000009396) #37	ENSKMAG00000009476	tcp11l2 (ENSKMAG00000009492)	apaf1 (ENSKMAG00000009512)	anks1b (ENSKMAG00000009595)	uhrf1bp1l (ENSKMAG00000009835)	ENSKMAG00000009968	ENSKMAG00000009977	arfgap3 (ENSKMAG00000009990)	pacsin2 (ENSKMAG00000010039)	ttll1 (ENSKMAG00000010091)	ENSKMAG00000010139	ENSKMAG00000010178	ENSKMAG00000010200	washc3 (ENSKMAG00000010212) #22	dram1 (ENSKMAG00000010245) #23	gnptab (ENSKMAG00000010288) #24	chpt1 (ENSKMAG00000010383) #26	mybpc1 (ENSKMAG00000010418) #27	ENSKMAG00000010471 ##28	spic (ENSKMAG00000010487) #28	atp6v1e1b (ENSKMAG00000010516)	ADA2 (ENSKMAG00000010554)	GALNT8 (ENSKMAG00000010618)	rad51ap1 (ENSKMAG00000010739)	fgf6b (ENSKMAG00000010762)	fgf23 (ENSKMAG00000010819)	tigarb (ENSKMAG00000010863)	ccnd2b (ENSKMAG00000010871)	ENSKMAG00000010895
Turquoise killifish	MODERN SPECIES	1610	ENSNFUG00015004386	anks1b (ENSNFUG00015004405)	ENSNFUG00015004435	uhrf1bp1l (ENSNFUG00015004470)	ENSNFUG00015004603	ENSNFUG00015004606	IKBIP (ENSNFUG00015004611)	arfgap3 (ENSNFUG00015004659)	ENSNFUG00015005252	PACSIN2 (ENSNFUG00015005272)	TTLL1 (ENSNFUG00015005326)	MCAT (ENSNFUG00015005355)	OLA.20856 (ENSNFUG00015005361)	ENSNFUG00015005372	ENSNFUG00015005478	CCDC53 (ENSNFUG00015005505) #22	dram1 (ENSNFUG00015005513) #23	zgc:113019 (ENSNFUG00015005524)	ENSNFUG00015005535 #24	chpt1 (ENSNFUG00015005553) #26	mybpc1 (ENSNFUG00015005654) #27	ENSNFUG00015005927	spic (ENSNFUG00015005937) #28	atp6v1e1b (ENSNFUG00015005953)	ADA2 (ENSNFUG00015005968)	GALNT8 (ENSNFUG00015005978)	fgf6b (ENSNFUG00015006006)	fgf23 (ENSNFUG00015006025)	tigarb (ENSNFUG00015006043)	CCND2B (ENSNFUG00015006054)	ENSNFUG00015006063
Cyprinodontoidei	ANCESTRAL SPECIES	20	ENSGT00950000182976.a.a	ENSGT00940000157835	ENSGT00940000157710	ENSGT00940000154572.h	ENSGT00600000084428.b	ENSGT00390000015968	ENSGT00500000045001	ENSGT00940000158466	ENSGT00950000182973.a.c.b	ENSGT00940000156720	ENSGT01030000234980	ENSGT00390000013715	ENSGT00950000183017.b.b.a.a	ENSGT00940000165434	ENSGT01100000263519.E.b.b	ENSGT00390000014084 #22	ENSGT01030000234578.B.a #23	ENSGT00390000006747 #24	ENSGT00950000183117.a.a #26	ENSGT00940000158254 #27	ENSGT00940000155067.b.a ##28	ENSGT00940000155067.a #28	ENSGT00650000094663	ENSGT00390000002730.e.b	ENSGT00950000183113.b.b.c.b	ENSGT00940000160161.e.a	ENSGT00940000153414.A	ENSGT00940000157821.h.a	ENSGT00940000160821	ENSGT00940000163946.a	ENSGT00940000155180.b.b
NAME_4	ANCESTRAL SPECIES	16	ENSGT00880000138031 #37	ENSGT00950000182976.a.a	ENSGT00940000157835	ENSGT00940000157710	ENSGT00940000154572.h	ENSGT00600000084428.b	ENSGT00390000015968	ENSGT00500000045001	ENSGT00940000158466	ENSGT00950000182973.a.c.b	ENSGT00940000156720	ENSGT00390000013715	ENSGT00950000183017.b.b.a.a	ENSGT00940000165434	ENSGT00940000153582.a.m.b	ENSGT00390000014084 #22	ENSGT01030000234578.B.a #23	ENSGT00390000006747 #24	ENSGT00950000183117.a.a #26	ENSGT00940000158254 #27	ENSGT00940000155067.b.a ##28	ENSGT00940000155067.a #28	ENSGT00390000002730.e.b	ENSGT00950000183113.b.b.c.b	ENSGT00940000160161.e.a	ENSGT00940000153414.A	ENSGT00940000157821.h.a	ENSGT00940000160821	ENSGT00940000163946.a	ENSGT00940000155180.b.b	ENSGT00940000157502
Mummichog	MODERN SPECIES	2268	scyl2 (ENSFHEG00000004766) #37	ENSFHEG00000004783	tcp11l2 (ENSFHEG00000004788)	apaf1 (ENSFHEG00000004836)	anks1b (ENSFHEG00000005075)	uhrf1bp1l (ENSFHEG00000005121)	ENSFHEG00000005152	ENSFHEG00000005173	arfgap3 (ENSFHEG00000005194)	pacsin2 (ENSFHEG00000005223)	ttll1 (ENSFHEG00000005277)	mcat (ENSFHEG00000005308)	ENSFHEG00000005325	ENSFHEG00000005675	ENSFHEG00000000591	washc3 (ENSFHEG00000005762) #22	dram1 (ENSFHEG00000005781) #23	ENSFHEG00000005792 #24
Sheepshead minnow	MODERN SPECIES	1973											ttll1 (ENSCVAG00000002391)	mcat (ENSCVAG00000002398)	ENSCVAG00000002403	ENSCVAG00000002409	ENSCVAG00000002414	washc3 (ENSCVAG00000002421) #22
Poeciliinae	ANCESTRAL SPECIES	19	ENSGT00950000182976.a.a	ENSGT00940000157835	ENSGT00940000157710	ENSGT00940000154572.h	ENSGT00600000084428.b	ENSGT00390000015968	ENSGT00500000045001	ENSGT00940000158466	ENSGT00950000182973.a.c.b	ENSGT00940000156720	ENSGT01030000234980	ENSGT00390000013715	ENSGT00950000183017.b.b.a.a	ENSGT00940000165434	ENSGT01100000263519.E.b.b	ENSGT00390000014084 #22	ENSGT01030000234578.B.a #23	ENSGT00390000006747 #24	ENSGT00950000183117.a.a #26	ENSGT00940000158254 #27	ENSGT00940000155067.b.a ##28	ENSGT00940000155067.a #28	ENSGT00650000094663	ENSGT00390000002730.e.b	ENSGT00950000183113.b.b.c.b	ENSGT00940000160161.e.a	ENSGT00940000153414.A	ENSGT00940000157821.h.a	ENSGT00940000160821	ENSGT00940000163946.a	ENSGT00940000155180.b.b
Poecilia	ANCESTRAL SPECIES	29	ENSGT00950000182976.a.a	ENSGT00940000157835	ENSGT00940000157710	ENSGT00940000154572.h	ENSGT00600000084428.b	ENSGT00390000015968	ENSGT00500000045001	ENSGT00940000158466	ENSGT00950000182973.a.c.b	ENSGT00940000156720	ENSGT01030000234980	ENSGT00390000013715	ENSGT00950000183017.b.b.a.a	ENSGT00940000165434	ENSGT01100000263519.E.b.b	ENSGT00390000014084 #22	ENSGT01030000234578.B.a #23	ENSGT00390000006747 #24	ENSGT00950000183117.a.a #26	ENSGT00940000158254 #27	ENSGT00940000155067.b.a ##28	ENSGT00940000155067.a #28	ENSGT00650000094663	ENSGT00390000002730.e.b	ENSGT00950000183113.b.b.c.b	ENSGT00940000160161.e.a	ENSGT00940000153414.A	ENSGT00940000157821.h.a	ENSGT00940000160821	ENSGT00940000163946.a	ENSGT00940000155180.b.b
NAME_6	ANCESTRAL SPECIES	144	ENSGT00950000182976.a.a	ENSGT00940000157835	ENSGT00940000157710	ENSGT00940000154572.h	ENSGT00600000084428.b	ENSGT00390000015968	ENSGT00500000045001	ENSGT00940000158466	ENSGT00950000182973.a.c.b	ENSGT00940000156720	ENSGT01030000234980	ENSGT00390000013715	ENSGT00950000183017.b.b.a.a	ENSGT00940000165434	ENSGT01100000263519.E.b.b	ENSGT00390000014084 #22	ENSGT01030000234578.B.a #23	ENSGT00390000006747 #24	ENSGT00950000183117.a.a #26	ENSGT00940000158254 #27	ENSGT00940000155067.b.a ##28	ENSGT00940000155067.a #28	ENSGT00650000094663	ENSGT00390000002730.e.b	ENSGT00950000183113.b.b.c.b
Amazon molly	MODERN SPECIES	758				ENSPFOG00000024697	uhrf1bp1l (ENSPFOG00000011679)	ENSPFOG00000011664	ENSPFOG00000011608	arfgap3 (ENSPFOG00000011554)	pacsin2 (ENSPFOG00000011411)	ttll1 (ENSPFOG00000011289)	ENSPFOG00000022481	mcat (ENSPFOG00000011255)	ENSPFOG00000011146	ENSPFOG00000020473	ENSPFOG00000011135	washc3 (ENSPFOG00000011097) #22	dram1 (ENSPFOG00000011093) #23	gnptab (ENSPFOG00000010807) #24	chpt1 (ENSPFOG00000010683) #26	mybpc1 (ENSPFOG00000010415) #27	ENSPFOG00000020472 ##28	spic (ENSPFOG00000010380) #28	ENSPFOG00000021678	atp6v1e1b (ENSPFOG00000010320)	ENSPFOG00000010309
Sailfin molly	MODERN SPECIES	362					anks1b (ENSPLAG00000009858)	uhrf1bp1l (ENSPLAG00000009881)	ENSPLAG00000009920	ENSPLAG00000009948	arfgap3 (ENSPLAG00000009966)	pacsin2 (ENSPLAG00000010009)	ttll1 (ENSPLAG00000010045)	mcat (ENSPLAG00000010048)	ENSPLAG00000010063	ENSPLAG00000010376	ENSPLAG00000010390	washc3 (ENSPLAG00000010415) #22	dram1 (ENSPLAG00000010424) #23	ENSPLAG00000010458 #24
Guppy	MODERN SPECIES	454	ENSPREG00000001150	ENSPREG00000001131	apaf1 (ENSPREG00000000752)	anks1b (ENSPREG00000023036)	uhrf1bp1l (ENSPREG00000023028)	ENSPREG00000023024	ENSPREG00000023023	ENSPREG00000023017	arfgap3 (ENSPREG00000023004)	pacsin2 (ENSPREG00000022997)	ttll1 (ENSPREG00000022989)	mcat (ENSPREG00000022982)	ENSPREG00000022976	ENSPREG00000022959	ENSPREG00000022945	washc3 (ENSPREG00000022940) #22	dram1 (ENSPREG00000022934) #23	gnptab (ENSPREG00000022929) #24	chpt1 (ENSPREG00000022922) #26	mybpc1 (ENSPREG00000022909) #27	ENSPREG00000022906 ##28	spic (ENSPREG00000022899) #28	atp6v1e1b (ENSPREG00000022891)	ADA2 (ENSPREG00000022887)	GALNT8 (ENSPREG00000022881)	ENSPREG00000022878	fgf6b (ENSPREG00000022872)	fgf23 (ENSPREG00000022868)	tigarb (ENSPREG00000022862)	ccnd2b (ENSPREG00000022859)	ENSPREG00000022855
Platyfish	MODERN SPECIES	8	ENSXMAG00000018558	tcp11l2 (ENSXMAG00000018543)	apaf1 (ENSXMAG00000018504)	anks1b (ENSXMAG00000001252)	ENSXMAG00000025411	uhrf1bp1l (ENSXMAG00000001296)	ENSXMAG00000001319	ENSXMAG00000001321	arfgap3 (ENSXMAG00000001324)	pacsin2 (ENSXMAG00000001367)	ttll1 (ENSXMAG00000027638)	mcat (ENSXMAG00000021275)	ENSXMAG00000001421	ENSXMAG00000029748	ENSXMAG00000001447	washc3 (ENSXMAG00000001448) #22	dram1 (ENSXMAG00000001465) #23	gnptab (ENSXMAG00000001470) #24	chpt1 (ENSXMAG00000001481) #26	ENSXMAG00000027306	ENSXMAG00000026773	mybpc1 (ENSXMAG00000001498) #27	GALNT8 (ENSXMAG00000004265)	ENSXMAG00000004282	fgf6b (ENSXMAG00000029319)	fgf23 (ENSXMAG00000004291)	tigarb (ENSXMAG00000004294)	ccnd2b (ENSXMAG00000021534)	ENSXMAG00000026207	ENSXMAG00000004330	creb3l2 (ENSXMAG00000004377)
Oryzias	ANCESTRAL SPECIES	20	ENSGT00950000182976.a.a	ENSGT00940000157835	ENSGT00940000157710	ENSGT00940000154572.h	ENSGT00600000084428.b	ENSGT00390000015968	ENSGT00500000045001	ENSGT00940000158466	ENSGT00950000182973.a.c.b	ENSGT00940000156720	ENSGT01030000234980	ENSGT00390000013715	ENSGT00950000183017.b.b.a.a	ENSGT00940000165434	ENSGT00940000153582.a.m.b	ENSGT00390000014084 #22	ENSGT01030000234578.B.a #23	ENSGT00390000006747 #24	ENSGT00950000183117.a.a #26	ENSGT00940000158254 #27	ENSGT00940000155067.b.a ##28	ENSGT00940000155067.a #28	ENSGT00650000094663	ENSGT00390000002730.e.b	ENSGT00950000183113.b.b.c.b	ENSGT00940000160161.e.a.j	ENSGT00940000160161.e.a.i	ENSGT00940000153414.A	ENSGT00940000157821.h.a	ENSGT00940000160821	ENSGT00940000163946.a
Oryzias_a	ANCESTRAL SPECIES	15	ENSGT00950000182976.a.a	ENSGT00940000157835	ENSGT00940000157710	ENSGT00940000154572.h	ENSGT00600000084428.b	ENSGT00390000015968	ENSGT00500000045001	ENSGT00940000158466	ENSGT00950000182973.a.c.b	ENSGT00940000156720	ENSGT01030000234980	ENSGT00390000013715	ENSGT00950000183017.b.b.a.a	ENSGT00940000165434	ENSGT00940000153582.a.m.b	ENSGT00390000014084 #22	ENSGT01030000234578.B.a #23	ENSGT00390000006747 #24	ENSGT00950000183117.a.a #26	ENSGT00940000158254 #27	ENSGT00940000155067.b.a ##28	ENSGT00940000155067.a #28	ENSGT00650000094663	ENSGT00390000002730.e.b	ENSGT00950000183113.b.b.c.b	ENSGT00940000160161.e.a.j	ENSGT00940000160161.e.a.i	ENSGT00940000153414.A	ENSGT00940000157821.h.a	ENSGT00940000160821	ENSGT00940000163946.a
Chinese medaka	DUPLICATION
Chinese medaka	MODERN SPECIES	51	scyl2 (ENSOSIG00000021363) #37	ENSOSIG00000021372	tcp11l2 (ENSOSIG00000021375)	apaf1 (ENSOSIG00000021425)	anks1b (ENSOSIG00000021498)	uhrf1bp1l (ENSOSIG00000021508)	IKBIP (ENSOSIG00000021511)	ENSOSIG00000021513	arfgap3 (ENSOSIG00000021515)	pacsin2 (ENSOSIG00000021517)	ttll1 (ENSOSIG00000021524)	MCAT (ENSOSIG00000021525)	ENSOSIG00000021526	ENSOSIG00000021530	ENSOSIG00000021536	washc3 (ENSOSIG00000000058) #22	dram1 (ENSOSIG00000000069) #23	gnptab (ENSOSIG00000000122) #24	chpt1 (ENSOSIG00000000153) #26	ENSOSIG00000001145 ##28	spic (ENSOSIG00000001147) #28	atp6v1e1b (ENSOSIG00000001152)	ADA2 (ENSOSIG00000001155)	ENSOSIG00000001157	rad51ap1 (ENSOSIG00000001165)	fgf6b (ENSOSIG00000001166)	fgf23 (ENSOSIG00000001167)	ccnd2b (ENSOSIG00000001169)	ENSOSIG00000001170	ENSOSIG00000001172	llph (ENSOSIG00000001175)
Chinese medaka	MODERN SPECIES	52	tcp11l2 (ENSOSIG00000019881)	apaf1 (ENSOSIG00000019941)	anks1b (ENSOSIG00000020564)	uhrf1bp1l (ENSOSIG00000020583)	ENSOSIG00000020714	IKBIP (ENSOSIG00000020726)	arfgap3 (ENSOSIG00000020737)	pacsin2 (ENSOSIG00000020745)	ttll1 (ENSOSIG00000020755)	ENSOSIG00000020757	MCAT (ENSOSIG00000020758)	ENSOSIG00000020759	ENSOSIG00000020762	ENSOSIG00000020763	ENSOSIG00000020764	washc3 (ENSOSIG00000020765) #22	dram1 (ENSOSIG00000020770) #23	gnptab (ENSOSIG00000020780) #24	chpt1 (ENSOSIG00000020799) #26	ENSOSIG00000020844 ##28	spic (ENSOSIG00000020853) #28	ENSOSIG00000020860	atp6v1e1b (ENSOSIG00000020873)	ADA2 (ENSOSIG00000020880)	ENSOSIG00000020886	rad51ap1 (ENSOSIG00000020890)	fgf23 (ENSOSIG00000020897)	tigarb (ENSOSIG00000020901)	ccnd2b (ENSOSIG00000020905)	ENSOSIG00000020908	ENSOSIG00000020914
Japanese Medaka HdrR	MODERN SPECIES	15	apaf1 (ENSORLG00000015449)	ENSORLG00000022959	ENSORLG00000025240	anks1b (ENSORLG00000015497)	uhrf1bp1l (ENSORLG00000015538)	ENSORLG00000015544	IKBIP (ENSORLG00000015552)	arfgap3 (ENSORLG00000027675)	pacsin2 (ENSORLG00000015594)	ttll1 (ENSORLG00000015623)	ENSORLG00000025654	mcat (ENSORLG00000015629)	ENSORLG00000024339	ENSORLG00000015646	ENSORLG00000022558	washc3 (ENSORLG00000015655) #22	dram1 (ENSORLG00000015662) #23	gnptab (ENSORLG00000015673) #24	chpt1 (ENSORLG00000015697) #26	mybpc1 (ENSORLG00000015767) #27	ENSORLG00000015776 ##28	spic (ENSORLG00000023569) #28	ENSORLG00000022679	atp6v1e1b (ENSORLG00000015787)	ENSORLG00000015798	ENSORLG00000022351	GALNT8 (ENSORLG00000015811)	rad51ap1 (ENSORLG00000015813)	fgf6b (ENSORLG00000030652)	fgf23 (ENSORLG00000015823)	tigarb (ENSORLG00000015830)
Oryzias_b	ANCESTRAL SPECIES	19	ENSGT00950000182976.a.a	ENSGT00940000157835	ENSGT00940000157710	ENSGT00940000154572.h	ENSGT00600000084428.b	ENSGT00390000015968	ENSGT00500000045001	ENSGT00940000158466	ENSGT00950000182973.a.c.b	ENSGT00940000156720	ENSGT01030000234980	ENSGT00390000013715	ENSGT00950000183017.b.b.a.a	ENSGT00940000165434	ENSGT00940000153582.a.m.b	ENSGT00390000014084 #22	ENSGT01030000234578.B.a #23	ENSGT00390000006747 #24	ENSGT00950000183117.a.a #26	ENSGT00940000158254 #27	ENSGT00940000155067.b.a ##28	ENSGT00940000155067.a #28	ENSGT00650000094663	ENSGT00390000002730.e.b	ENSGT00950000183113.b.b.c.b	ENSGT00940000160161.e.a.j	ENSGT00940000160161.e.a.i	ENSGT00940000153414.A	ENSGT00940000157821.h.a	ENSGT00940000160821	ENSGT00940000163946.a
Indian medaka	MODERN SPECIES	2	DEPDC4 (ENSOMEG00000005967)	tcp11l2 (ENSOMEG00000005951)	apaf1 (ENSOMEG00000000126)	anks1b (ENSOMEG00000005882)	uhrf1bp1l (ENSOMEG00000005823)	ENSOMEG00000005666	ENSOMEG00000005651	arfgap3 (ENSOMEG00000005631)	pacsin2 (ENSOMEG00000005606)	ttll1 (ENSOMEG00000005534)	ENSOMEG00000005476	mcat (ENSOMEG00000005466)	ENSOMEG00000005452	ENSOMEG00000005420	ENSOMEG00000005361	washc3 (ENSOMEG00000005345) #22	dram1 (ENSOMEG00000005329) #23	gnptab (ENSOMEG00000005296) #24	chpt1 (ENSOMEG00000005231) #26	mybpc1 (ENSOMEG00000005189) #27	ENSOMEG00000005027 ##28	spic (ENSOMEG00000005008) #28	ENSOMEG00000004981	atp6v1e1b (ENSOMEG00000004969)	ADA2 (ENSOMEG00000004937)	GALNT8 (ENSOMEG00000004928)	GALNT8 (ENSOMEG00000004913)	rad51ap1 (ENSOMEG00000004896)	fgf6b (ENSOMEG00000004874)	fgf23 (ENSOMEG00000004863)	tigarb (ENSOMEG00000004846)
Javanese ricefish	MODERN SPECIES	15	scyl2 (ENSOJAG00000022587) #37	ENSOJAG00000022579	tcp11l2 (ENSOJAG00000022552)	apaf1 (ENSOJAG00000022532)	anks1b (ENSOJAG00000022495)	ENSOJAG00000022382	IKBIP (ENSOJAG00000022377)	arfgap3 (ENSOJAG00000022364)	pacsin2 (ENSOJAG00000022339)	ttll1 (ENSOJAG00000022321)	ENSOJAG00000022309	mcat (ENSOJAG00000022292)	ENSOJAG00000022285	ENSOJAG00000022217	ENSOJAG00000022211	washc3 (ENSOJAG00000022199) #22	dram1 (ENSOJAG00000022195) #23	gnptab (ENSOJAG00000022183) #24	chpt1 (ENSOJAG00000022162) #26	mybpc1 (ENSOJAG00000022114) #27	ENSOJAG00000022100 ##28	spic (ENSOJAG00000022098) #28	ENSOJAG00000022094	atp6v1e1b (ENSOJAG00000022078)	ADA2 (ENSOJAG00000022064)	GALNT8 (ENSOJAG00000022045)	GALNT8 (ENSOJAG00000022020)	rad51ap1 (ENSOJAG00000021986)	fgf6b (ENSOJAG00000021978)	fgf23 (ENSOJAG00000021977)	tigarb (ENSOJAG00000021965)
Ovalentaria_B	ANCESTRAL SPECIES	23	ENSGT00940000157835	ENSGT00940000157710	ENSGT00940000154572.g.b	ENSGT00940000177480.a	ENSGT00940000154572.h	ENSGT00600000084428.b	ENSGT00390000015968	ENSGT00500000045001	ENSGT00940000158466	ENSGT00950000182973.a.c.b	ENSGT00940000156720	ENSGT00390000013715	ENSGT00950000183017.b.b.a.a	ENSGT00940000165434	ENSGT01100000263519.E.b.b	ENSGT00390000014084 #22	ENSGT01030000234578.B.a #23	ENSGT00390000006747 #24	ENSGT00950000183117.a.a #26	ENSGT00940000158254 #27	ENSGT00940000155067.b.a ##28	ENSGT00940000155067.a #28	ENSGT00650000094663	ENSGT00390000002730.e.b	ENSGT00950000183113.b.b.c.b	ENSGT00940000160161.e.a	ENSGT00940000153414.A	ENSGT00940000157821.h.a	ENSGT00940000160821	ENSGT00940000163946.a	ENSGT00940000155180.b.b
Cichlidae	ANCESTRAL SPECIES	24	ENSGT00880000138031 #37	ENSGT00950000182976.a.a	ENSGT00940000157835	ENSGT00940000157710	ENSGT00940000154572.h	ENSGT00600000084428.b	ENSGT00390000015968	ENSGT00500000045001	ENSGT00940000158466	ENSGT00950000182973.a.c.b	ENSGT00940000156720	ENSGT00390000013715	ENSGT00950000183017.b.b.a.a	ENSGT00940000165434	ENSGT01100000263519.E.b.b	ENSGT00390000014084 #22	ENSGT01030000234578.B.a #23	ENSGT00390000006747 #24	ENSGT00950000183117.a.a #26	ENSGT00940000158254 #27	ENSGT00940000155067.b.a ##28	ENSGT00940000155067.a #28	ENSGT00650000094663	ENSGT00390000002730.e.b	ENSGT00950000183113.b.b.c.b	ENSGT00940000160161.e.a	ENSGT00940000153414.A	ENSGT00940000157821.h.a	ENSGT00940000160821	ENSGT00940000163946.a	ENSGT00940000155180.b.b
Pseudocrenilabrinae	ANCESTRAL SPECIES	21	ENSGT00950000182976.a.a	ENSGT00940000157835	ENSGT00940000157710	ENSGT00940000182271	ENSGT00940000154572.h	ENSGT00600000084428.b	ENSGT00390000015968	ENSGT00500000045001	ENSGT00940000158466	ENSGT00950000182973.a.c.b	ENSGT00940000156720	ENSGT00390000013715.e	ENSGT00950000183017.b.b.a.a	ENSGT00940000165434	ENSGT01100000263519.E.b.b	ENSGT00390000014084 #22	ENSGT01030000234578.B.a #23	ENSGT00390000006747 #24	ENSGT00950000183117.a.a #26	ENSGT00940000158254 #27	ENSGT00940000155067.b.a ##28	ENSGT00940000155067.a #28	ENSGT00650000094663	ENSGT00390000002730.e.b	ENSGT00950000183113.b.b.c.b	ENSGT00940000160161.e.a	ENSGT00940000153414.A	ENSGT00940000157821.h.a	ENSGT00940000160821	ENSGT00940000163946.a	ENSGT00940000155180.b.b
Nile tilapia	MODERN SPECIES	8	ENSONIG00000011437	tcp11l2 (ENSONIG00000011431)	apaf1 (ENSONIG00000011426)	ENSONIG00000039975	anks1b (ENSONIG00000011422)	uhrf1bp1l (ENSONIG00000011416)	ENSONIG00000011415	ENSONIG00000011413	arfgap3 (ENSONIG00000011404)	pacsin2 (ENSONIG00000011394)	ttll1 (ENSONIG00000011392)	MCAT (ENSONIG00000011389)	ENSONIG00000000058	ENSONIG00000031740	ENSONIG00000000057	washc3 (ENSONIG00000000054) #22	dram1 (ENSONIG00000000053) #23	gnptab (ENSONIG00000000050) #24	chpt1 (ENSONIG00000000048) #26	mybpc1 (ENSONIG00000000034) #27	ENSONIG00000031554 ##28	spic (ENSONIG00000000031) #28	ENSONIG00000029892	atp6v1e1b (ENSONIG00000000021)	ADA2 (ENSONIG00000000020)	GALNT8 (ENSONIG00000000018)	rad51ap1 (ENSONIG00000034788)	FGF6 (ENSONIG00000035736)	fgf23 (ENSONIG00000000016)	tigarb (ENSONIG00000000015)	ENSONIG00000028964
Pseudocrenilabrinae_A	ANCESTRAL SPECIES	10	ENSGT00950000182976.a.a	ENSGT00940000157835	ENSGT00940000157710	ENSGT00940000182271	ENSGT00940000154572.h	ENSGT00600000084428.b	ENSGT00390000015968	ENSGT00500000045001	ENSGT00940000158466	ENSGT00950000182973.a.c.b	ENSGT00940000156720	ENSGT00390000013715.e	ENSGT00950000183017.b.b.a.a	ENSGT00940000165434	ENSGT01100000263519.E.b.b	ENSGT00390000014084 #22	ENSGT01030000234578.B.a #23	ENSGT00390000006747 #24	ENSGT00950000183117.a.a #26	ENSGT00940000158254 #27	ENSGT00940000155067.b.a ##28	ENSGT00940000155067.a #28	ENSGT00650000094663	ENSGT00390000002730.e.b	ENSGT00950000183113.b.b.c.b	ENSGT00940000160161.e.a	ENSGT00940000153414.A	ENSGT00940000157821.h.a	ENSGT00940000160821	ENSGT00940000163946.a	ENSGT00940000155180.b.b
Lyretail cichlid	MODERN SPECIES	291	scyl2 (ENSNBRG00000007169) #37	ENSNBRG00000007440	tcp11l2 (ENSNBRG00000007474)	apaf1 (ENSNBRG00000007523)	ENSNBRG00000008092	anks1b (ENSNBRG00000008153)	uhrf1bp1l (ENSNBRG00000008275)	IKBIP (ENSNBRG00000008541)	ENSNBRG00000008564	pacsin2 (ENSNBRG00000008592)	ttll1 (ENSNBRG00000008651)	mcat (ENSNBRG00000008678)	ENSNBRG00000008695	ENSNBRG00000008721	ENSNBRG00000008771	washc3 (ENSNBRG00000008811) #22	dram1 (ENSNBRG00000008841) #23	gnptab (ENSNBRG00000008859) #24	chpt1 (ENSNBRG00000008915) #26	mybpc1 (ENSNBRG00000009045) #27	ENSNBRG00000009204 ##28	spic (ENSNBRG00000009212) #28	ENSNBRG00000009237	atp6v1e1b (ENSNBRG00000009246)	ADA2 (ENSNBRG00000009273)	GALNT8 (ENSNBRG00000009324)	rad51ap1 (ENSNBRG00000009488)	fgf6b (ENSNBRG00000009517)	fgf23 (ENSNBRG00000009529)	tigarb (ENSNBRG00000009544)	ccnd2b (ENSNBRG00000009560)
Haplochromini	ANCESTRAL SPECIES	9	ENSGT00940000157835	ENSGT00940000157710	ENSGT00940000182271	ENSGT00940000154572.h	ENSGT00600000084428.b	ENSGT00390000015968	ENSGT00500000045001	ENSGT00940000158466	ENSGT00950000182973.a.c.b	ENSGT00940000156720	ENSGT00390000013715.e	ENSGT00390000013715.f.b	ENSGT00950000183017.b.b.a.a	ENSGT00940000165434	ENSGT01100000263519.E.b.b	ENSGT00390000014084 #22	ENSGT01030000234578.B.a #23	ENSGT00390000006747 #24	ENSGT00950000183117.a.a #26	ENSGT00940000158254 #27	ENSGT00940000155067.a #28	ENSGT00940000155067.b.a ##28	ENSGT00650000094663	ENSGT00390000002730.e.b	ENSGT00950000183113.b.b.c.b	ENSGT00940000160161.e.a	ENSGT00940000153414.A	ENSGT00940000157821.h.a	ENSGT00940000160821	ENSGT00940000163946.a	ENSGT00940000155180.b.b
Burton s mouthbrooder	MODERN SPECIES	326												ttll1 (ENSHBUG00000010106)	ENSHBUG00000010117	ENSHBUG00000010130	ENSHBUG00000010136	washc3 (ENSHBUG00000010156) #22	dram1 (ENSHBUG00000010174) #23	gnptab (ENSHBUG00000010241) #24	chpt1 (ENSHBUG00000010262) #26	mybpc1 (ENSHBUG00000010317) #27	spic (ENSHBUG00000010323) #28	ENSHBUG00000000751 ##28	ENSHBUG00000010339	atp6v1e1b (ENSHBUG00000010346)	ADA2 (ENSHBUG00000010355)	GALNT8 (ENSHBUG00000010367)	rad51ap1 (ENSHBUG00000010387)	fgf6b (ENSHBUG00000010400)	fgf23 (ENSHBUG00000010404)	tigarb (ENSHBUG00000010410)	ccnd2b (ENSHBUG00000010434)
Haplochromini_A	ANCESTRAL SPECIES	9	ENSGT00940000157835	ENSGT00940000157710	ENSGT00940000182271	ENSGT00940000154572.h	ENSGT00600000084428.b	ENSGT00390000015968	ENSGT00500000045001	ENSGT00940000158466	ENSGT00950000182973.a.c.b	ENSGT00940000156720	ENSGT00390000013715.e	ENSGT00390000013715.f.b	ENSGT00950000183017.b.b.a.a	ENSGT00940000165434	ENSGT01100000263519.E.b.b	ENSGT00390000014084 #22	ENSGT01030000234578.B.a #23	ENSGT00390000006747 #24	ENSGT00950000183117.a.a #26	ENSGT00940000158254 #27	ENSGT00940000155067.a #28	ENSGT00940000155067.b.a ##28	ENSGT00650000094663	ENSGT00390000002730.e.b	ENSGT00950000183113.b.b.c.b	ENSGT00940000160161.e.a	ENSGT00940000153414.A	ENSGT00940000157821.h.a	ENSGT00940000160821	ENSGT00940000163946.a	ENSGT00940000155180.b.b
P. nyererei	MODERN SPECIES	399													ENSPNYG00000016347	ENSPNYG00000016362	ENSPNYG00000016385	washc3 (ENSPNYG00000016399) #22	dram1 (ENSPNYG00000016418) #23	gnptab (ENSPNYG00000016486) #24	chpt1 (ENSPNYG00000016539) #26	mybpc1 (ENSPNYG00000016590) #27	spic (ENSPNYG00000016663) #28	ENSPNYG00000016683	atp6v1e1b (ENSPNYG00000016695)	ADA2 (ENSPNYG00000016721)	GALNT8 (ENSPNYG00000016765)	rad51ap1 (ENSPNYG00000016954)	fgf6b (ENSPNYG00000016978)	fgf23 (ENSPNYG00000017003)	ENSPNYG00000017063	ccnd2b (ENSPNYG00000017088)	ENSPNYG00000017122
Haplochromini_B	ANCESTRAL SPECIES	11	ENSGT00950000182976.a.a	ENSGT00940000157835	ENSGT00940000157710	ENSGT00940000154572.h	ENSGT00600000084428.b	ENSGT00390000015968	ENSGT00500000045001	ENSGT00940000158466	ENSGT00950000182973.a.c.b	ENSGT00940000156720	ENSGT00390000013715.e	ENSGT00390000013715.f.b	ENSGT00950000183017.b.b.a.a	ENSGT00940000165434	ENSGT01100000263519.E.b.b	ENSGT00390000014084 #22	ENSGT01030000234578.B.a #23	ENSGT00390000006747 #24	ENSGT00950000183117.a.a #26	ENSGT00940000158254 #27	ENSGT00940000155067.a #28	ENSGT00940000155067.b.a ##28	ENSGT00650000094663	ENSGT00390000002730.e.b	ENSGT00950000183113.b.b.c.b	ENSGT00940000160161.e.a	ENSGT00940000153414.A	ENSGT00940000157821.h.a	ENSGT00940000160821	ENSGT00940000163946.a	ENSGT00940000155180.b.b
Zebra mbuna	MODERN SPECIES	1099	tcp11l2 (ENSMZEG00005005314)	apaf1 (ENSMZEG00005005271)	anks1b (ENSMZEG00005005137)	uhrf1bp1l (ENSMZEG00005005085)	ENSMZEG00005005068	ENSMZEG00005005057	arfgap3 (ENSMZEG00005004994)	pacsin2 (ENSMZEG00005004949)	ttll1 (ENSMZEG00005004921)	MCAT (ENSMZEG00005004882)	MCAT (ENSMZEG00005003898)	ENSMZEG00005003873	ENSMZEG00005003794	ENSMZEG00005003759	ENSMZEG00005003750	washc3 (ENSMZEG00005003720) #22	dram1 (ENSMZEG00005003687) #23	gnptab (ENSMZEG00005003603) #24	chpt1 (ENSMZEG00005003555) #26	mybpc1 (ENSMZEG00005003483) #27	spic (ENSMZEG00005003465) #28	ENSMZEG00005003446 ##28	ENSMZEG00005003441	atp6v1e1b (ENSMZEG00005003431)	ADA2 (ENSMZEG00005003421)	GALNT8 (ENSMZEG00005003410)	rad51ap1 (ENSMZEG00005003373)	fgf6b (ENSMZEG00005003354)	fgf23 (ENSMZEG00005003332)	tigarb (ENSMZEG00005003326)	ccnd2b (ENSMZEG00005003304)
Eastern happy	MODERN SPECIES	8	ENSACLG00000022153	anks1b (ENSACLG00000022062)	uhrf1bp1l (ENSACLG00000021952)	ENSACLG00000021941	ENSACLG00000021874	ENSACLG00000021855	arfgap3 (ENSACLG00000021829)	pacsin2 (ENSACLG00000021744)	ttll1 (ENSACLG00000021714)	MCAT (ENSACLG00000021707)	ENSACLG00000021648	MCAT (ENSACLG00000021397)	ENSACLG00000021286	ENSACLG00000021272	ENSACLG00000021233	washc3 (ENSACLG00000021169) #22	dram1 (ENSACLG00000021133) #23	gnptab (ENSACLG00000021005) #24	chpt1 (ENSACLG00000020935) #26	mybpc1 (ENSACLG00000020482) #27	spic (ENSACLG00000020444) #28	atp6v1e1b (ENSACLG00000020410)	ADA2 (ENSACLG00000020373)	GALNT8 (ENSACLG00000020347)	rad51ap1 (ENSACLG00000020321)	fgf6b (ENSACLG00000020303)	fgf23 (ENSACLG00000020286)	tigarb (ENSACLG00000020276)	ccnd2b (ENSACLG00000020230)	ENSACLG00000020205	ENSACLG00000020180
Midas cichlid	MODERN SPECIES	30	DEPDC4 (ENSACIG00000003093)	tcp11l2 (ENSACIG00000003022)	ENSACIG00000003006	apaf1 (ENSACIG00000002681)	anks1b (ENSACIG00000002599)	uhrf1bp1l (ENSACIG00000002419)	ENSACIG00000002402	ENSACIG00000002383	ARFGAP3 (ENSACIG00000002359)	ENSACIG00000002333	pacsin2 (ENSACIG00000002313)	ttll1 (ENSACIG00000002277)	mcat (ENSACIG00000002257)	ENSACIG00000002246	ENSACIG00000002068	washc3 (ENSACIG00000002052) #22	ENSACIG00000002020	dram1 (ENSACIG00000002005) #23	gnptab (ENSACIG00000001951) #24	chpt1 (ENSACIG00000001916) #26	mybpc1 (ENSACIG00000001837) #27	ENSACIG00000001822 ##28	spic (ENSACIG00000001812) #28	atp6v1e1b (ENSACIG00000001791)	ADA2 (ENSACIG00000001772)	GALNT8 (ENSACIG00000001662)	rad51ap1 (ENSACIG00000001639)	fgf6b (ENSACIG00000001628)	fgf23 (ENSACIG00000001610)	tigarb (ENSACIG00000001521)
Pomacentridae	ANCESTRAL SPECIES	53	ENSGT00940000157835	ENSGT00940000157710	ENSGT00940000154572.g.b	ENSGT00940000177480.a	ENSGT00940000154572.h	ENSGT00600000084428.b	ENSGT00390000015968	ENSGT00500000045001	ENSGT00940000158466	ENSGT00950000182973.a.c.b	ENSGT00940000156720	ENSGT00390000013715	ENSGT00950000183017.b.b.a.a	ENSGT00940000165434	ENSGT00950000183169.B	ENSGT00390000014084 #22	ENSGT01030000234578.B.a #23	ENSGT00390000006747 #24	ENSGT00950000183117.a.a #26	ENSGT00940000158254 #27	ENSGT00940000155067.a #28
Pomacentridae_A	ANCESTRAL SPECIES	23	ENSGT00940000157710	ENSGT00940000154572.g.b	ENSGT00940000177480.a	ENSGT00940000154572.h	ENSGT00600000084428.b	ENSGT00390000015968	ENSGT00500000045001	ENSGT00940000158466	ENSGT00950000182973.a.c.b	ENSGT00940000156720	ENSGT00390000013715	ENSGT00950000183017.b.b.a.a	ENSGT00940000165434	ENSGT00950000183169.B	ENSGT01100000263519.E.b.b	ENSGT00390000014084 #22	ENSGT01030000234578.B.a #23	ENSGT00390000006747 #24	ENSGT00950000183117.a.a #26	ENSGT00940000158254 #27	ENSGT00940000155067.a #28	ENSGT00940000155765.s.b	ENSGT00590000083189.d	ENSGT00940000155118 #29	ENSGT00390000016813 #30	ENSGT00940000155166.A.p #31	ENSGT00940000155166.A.o #31	ENSGT00390000001810.b	ENSGT00390000004708	ENSGT00530000063722.a	ENSGT00390000009532.A.d.a
Amphiprion	ANCESTRAL SPECIES	53	ENSGT00880000138031 #37	ENSGT00950000182976.a.a	ENSGT00940000157835	ENSGT00940000157710	ENSGT00940000154572.h	ENSGT00600000084428.b	ENSGT00390000015968	ENSGT00500000045001	ENSGT00940000158466	ENSGT00950000182973.a.c.b	ENSGT00940000156720	ENSGT00390000013715	ENSGT00950000183017.b.b.a.a	ENSGT00940000165434	ENSGT00950000183169.B	ENSGT00390000014084 #22	ENSGT01030000234578.B.a #23	ENSGT00390000006747 #24	ENSGT00950000183117.a.a #26	ENSGT00940000158254 #27	ENSGT00940000155067.a #28
Clown anemonefish	DUPLICATION
Clown anemonefish	MODERN SPECIES	132																washc3 (ENSAOCG00000007471) #22	dram1 (ENSAOCG00000007518) #23
Clown anemonefish	MODERN SPECIES	124														ENSAOCG00000007914	ENSAOCG00000007872	washc3 (ENSAOCG00000007842) #22
Orange clownfish	MODERN SPECIES	13	ENSAPEG00000007791	tcp11l2 (ENSAPEG00000007824)	apaf1 (ENSAPEG00000007835)	anks1b (ENSAPEG00000007920)	uhrf1bp1l (ENSAPEG00000008081)	ENSAPEG00000008352	IKBIP (ENSAPEG00000008369)	arfgap3 (ENSAPEG00000008406)	pacsin2 (ENSAPEG00000008437)	ttll1 (ENSAPEG00000008515)	mcat (ENSAPEG00000008552)	ENSAPEG00000008564	ENSAPEG00000008581	ENSAPEG00000008602	ENSAPEG00000008628	washc3 (ENSAPEG00000008644) #22	dram1 (ENSAPEG00000008682) #23	gnptab (ENSAPEG00000008702) #24	chpt1 (ENSAPEG00000008824) #26	mybpc1 (ENSAPEG00000008858) #27	spic (ENSAPEG00000008947) #28	tprkb (ENSAPEG00000008986)	alg10 (ENSAPEG00000008990)	CPNE8 (ENSAPEG00000009053)	ENSAPEG00000009339	ABCD2 (ENSAPEG00000009450)	SLC2A13 (ENSAPEG00000009493)	ENSAPEG00000009548	slco1d1 (ENSAPEG00000009648)	ENSAPEG00000009757	IAPP (ENSAPEG00000010591)
Spiny chromis	MODERN SPECIES	42										pacsin2 (ENSAPOG00000003156)	ttll1 (ENSAPOG00000003058)	mcat (ENSAPOG00000003016)	ENSAPOG00000002982	ENSAPOG00000000062	ENSAPOG00000002764	washc3 (ENSAPOG00000002756) #22	dram1 (ENSAPOG00000002731) #23	gnptab (ENSAPOG00000002704) #24	chpt1 (ENSAPOG00000002634) #26	mybpc1 (ENSAPOG00000000056) #27	spic (ENSAPOG00000002560) #28	ENSAPOG00000002537	DENND11 (ENSAPOG00000002500)	arl1 (ENSAPOG00000002469) #29	UTP20 (ENSAPOG00000002429) #30	SLC5A8 (ENSAPOG00000002287) #31	SLC5A8 (ENSAPOG00000002252) #31	lyrm5a (ENSAPOG00000002229)	dnai7 (ENSAPOG00000002215)	lrmp (ENSAPOG00000002179)	bcat1 (ENSAPOG00000002125)
Bicolor damselfish	MODERN SPECIES	1821											ttll1 (ENSSPAG00000023246)	mcat (ENSSPAG00000023252)	ENSSPAG00000023257	ENSSPAG00000023264	ENSSPAG00000023270	washc3 (ENSSPAG00000023273) #22	dram1 (ENSSPAG00000023278) #23	gnptab (ENSSPAG00000023283) #24	chpt1 (ENSSPAG00000023295) #26	mybpc1 (ENSSPAG00000023300) #27	spic (ENSSPAG00000023306) #28
Percomorphaceae_C	ANCESTRAL SPECIES	22	ENSGT00940000154572.g.b	ENSGT00940000177480.a	ENSGT00940000154572.h	ENSGT00600000084428.b	ENSGT00950000183116.a.a	ENSGT00390000015968	ENSGT00500000045001	ENSGT00940000158466	ENSGT00950000182973.a.c.b	ENSGT00940000156720	ENSGT01030000234980	ENSGT00390000013715	ENSGT00950000183017.b.b.a.a	ENSGT00940000165434	ENSGT00940000153582.a.m.b	ENSGT00390000014084 #22	ENSGT01030000234578.B.a #23	ENSGT00390000006747 #24	ENSGT00950000183117.a.a #26	ENSGT00940000158254 #27	ENSGT00940000155067.b.a ##28	ENSGT00940000155067.a #28	ENSGT00650000094663	ENSGT00390000002730.e.b	ENSGT00950000183113.b.b.c.b	ENSGT00940000160161.e.a	ENSGT00940000153414.A	ENSGT00940000157821.h.a	ENSGT00940000160821	ENSGT00940000163946.a	ENSGT00940000155180.b.b
Eupercaria	ANCESTRAL SPECIES	21	ENSGT00940000157835	ENSGT00940000157710	ENSGT00940000154572.h	ENSGT00600000084428.b	ENSGT00950000183116.a.a	ENSGT00390000015968	ENSGT00500000045001	ENSGT00940000158466	ENSGT00950000182973.a.c.b	ENSGT00940000156720	ENSGT01030000234980	ENSGT00390000013715	ENSGT00950000183017.b.b.a.a	ENSGT00940000165434	ENSGT00940000153582.a.m.b	ENSGT00390000014084 #22	ENSGT01030000234578.B.a #23	ENSGT00390000006747 #24	ENSGT00950000183117.a.a #26	ENSGT00940000158254 #27	ENSGT00940000155067.b.a ##28	ENSGT00940000155067.a #28	ENSGT00650000094663	ENSGT00390000002730.e.b	ENSGT00950000183113.b.b.c.b	ENSGT00940000160161.e.a	ENSGT00940000153414.A	ENSGT00940000157821.h.a	ENSGT00940000160821	ENSGT00940000163946.a	ENSGT00940000155180.b.b
Tetraodontidae	ANCESTRAL SPECIES	17	ENSGT00950000182976.a.a	ENSGT00940000157835	ENSGT00940000157710	ENSGT00940000154572.h	ENSGT00600000084428.b	ENSGT00390000015968	ENSGT00500000045001	ENSGT00940000158466	ENSGT00950000182973.a.c.b	ENSGT00940000156720	ENSGT00390000013715	ENSGT00950000183017.b.b.a.a	ENSGT00940000165434	ENSGT01100000263519.E.b.b	ENSGT00940000168691	ENSGT00390000014084 #22	ENSGT01030000234578.B.a #23	ENSGT00390000006747 #24	ENSGT00950000183117.a.a #26	ENSGT00940000158254 #27	ENSGT00940000155067.b.a ##28	ENSGT00940000155067.a #28	ENSGT00390000002730.e.b	ENSGT00950000183113.b.b.c.b	ENSGT00940000160161.e.a	ENSGT00940000153414.A	ENSGT00940000157821.h.a	ENSGT00940000160821	ENSGT00940000163946.a	ENSGT00940000155180.b.b	ENSGT00940000165907
Fugu	MODERN SPECIES	9	ENSTRUG00000013501	tcp11l2 (ENSTRUG00000013371)	apaf1 (ENSTRUG00000013192)	anks1b (ENSTRUG00000013069)	uhrf1bp1l (ENSTRUG00000012937)	ENSTRUG00000012913	ENSTRUG00000023311	arfgap3 (ENSTRUG00000012812)	ENSTRUG00000013651	pacsin2 (ENSTRUG00000012654)	ttll1 (ENSTRUG00000012595)	ENSTRUG00000012423	ENSTRUG00000012399	ENSTRUG00000022066	ENSTRUG00000026359	washc3 (ENSTRUG00000029044) #22	dram1 (ENSTRUG00000032116) #23	gnptab (ENSTRUG00000012120) #24	chpt1 (ENSTRUG00000011969) #26	mybpc1 (ENSTRUG00000011461) #27	ENSTRUG00000031004 ##28	spic (ENSTRUG00000011424) #28	atp6v1e1b (ENSTRUG00000011314)	ADA2 (ENSTRUG00000011247)	GALNT8 (ENSTRUG00000011109)	rad51ap1 (ENSTRUG00000024004)	fgf6b (ENSTRUG00000011078)	fgf23 (ENSTRUG00000011062)	tigarb (ENSTRUG00000011015)	ccnd2b (ENSTRUG00000010895)	ENSTRUG00000010878
Tetraodon	MODERN SPECIES	11	kera (ENSTNIG00000011011)	epyc (ENSTNIG00000011010)	ENSTNIG00000011009	tcp11l2 (ENSTNIG00000011008)	apaf1 (ENSTNIG00000011007)	anks1b (ENSTNIG00000018849)	uhrf1bp1l (ENSTNIG00000011426)	ENSTNIG00000011425	ENSTNIG00000000798	arfgap3 (ENSTNIG00000011424)	pacsin2 (ENSTNIG00000011423)	ttll1 (ENSTNIG00000011422)	mcat (ENSTNIG00000011421)	ENSTNIG00000011420	ENSTNIG00000011419	washc3 (ENSTNIG00000011417) #22	dram1 (ENSTNIG00000001389) #23	gnptab (ENSTNIG00000011416) #24	chpt1 (ENSTNIG00000011415) #26	mybpc1 (ENSTNIG00000011414) #27	spic (ENSTNIG00000000056) #28	atp6v1e1b (ENSTNIG00000011413)	ADA2 (ENSTNIG00000011412)	fgf6b (ENSTNIG00000011411)	fgf23 (ENSTNIG00000011410)	tigarb (ENSTNIG00000001586)	CCND2 (ENSTNIG00000011409)	ENSTNIG00000011408	myf6 (ENSTNIG00000011407)	myf5 (ENSTNIG00000011406)	LIN7B (ENSTNIG00000011405)
Eupecaria_A	ANCESTRAL SPECIES	21	ENSGT00940000157835	ENSGT00940000157710	ENSGT00940000154572.h	ENSGT00600000084428.b	ENSGT00950000183116.a.a	ENSGT00390000015968	ENSGT00500000045001	ENSGT00940000158466	ENSGT00950000182973.a.c.b	ENSGT00940000156720	ENSGT01030000234980	ENSGT00390000013715	ENSGT00950000183017.b.b.a.a	ENSGT00940000165434	ENSGT00940000153582.a.m.b	ENSGT00390000014084 #22	ENSGT01030000234578.B.a #23	ENSGT00390000006747 #24	ENSGT00950000183117.a.a #26	ENSGT00940000158254 #27	ENSGT00940000155067.b.a ##28	ENSGT00940000155067.a #28	ENSGT00650000094663	ENSGT00390000002730.e.b	ENSGT00950000183113.b.b.c.b	ENSGT00940000160161.e.a	ENSGT00940000153414.A	ENSGT00940000157821.h.a	ENSGT00940000160821	ENSGT00940000163946.a	ENSGT00940000155180.b.b
Ballan wrasse	MODERN SPECIES	288	syt1a (ENSLBEG00000021895)	cyb5r3 (ENSLBEG00000021856)	ENSLBEG00000021784	syt10 (ENSLBEG00000021731)	tnnt2c (ENSLBEG00000021670)	ENSLBEG00000021657	IKBIP (ENSLBEG00000021638)	arfgap3 (ENSLBEG00000021563)	pacsin2 (ENSLBEG00000021510)	ttll1 (ENSLBEG00000021464)	ENSLBEG00000021449	mcat (ENSLBEG00000021435)	ENSLBEG00000021405	ENSLBEG00000021382	ENSLBEG00000021362	washc3 (ENSLBEG00000021335) #22	dram1 (ENSLBEG00000021279) #23	ENSLBEG00000021230	fam3c (ENSLBEG00000021194)	btg1 (ENSLBEG00000021173)
Eupecaria_B	ANCESTRAL SPECIES	21	ENSGT00940000157835	ENSGT00940000157710	ENSGT00940000154572.h	ENSGT00600000084428.b	ENSGT00950000183116.a.a	ENSGT00390000015968	ENSGT00500000045001	ENSGT00940000158466	ENSGT00950000182973.a.c.b	ENSGT00940000156720	ENSGT01030000234980	ENSGT00390000013715	ENSGT00950000183017.b.b.a.a	ENSGT00940000165434	ENSGT00940000153582.a.m.b	ENSGT00390000014084 #22	ENSGT01030000234578.B.a #23	ENSGT00390000006747 #24	ENSGT00950000183117.a.a #26	ENSGT00940000158254 #27	ENSGT00940000155067.b.a ##28	ENSGT00940000155067.a #28	ENSGT00650000094663	ENSGT00390000002730.e.b	ENSGT00950000183113.b.b.c.b	ENSGT00940000160161.e.a	ENSGT00940000153414.A	ENSGT00940000157821.h.a	ENSGT00940000160821	ENSGT00940000163946.a	ENSGT00940000155180.b.b
Perciformes	ANCESTRAL SPECIES	18	ENSGT00940000157835	ENSGT00940000157710	ENSGT00940000154572.h	ENSGT00600000084428.b	ENSGT00950000183116.a.a	ENSGT00390000015968	ENSGT00500000045001	ENSGT00940000158466	ENSGT00950000182973.a.c.b	ENSGT00940000156720	ENSGT01030000234980	ENSGT00390000013715	ENSGT00950000183017.b.b.a.a	ENSGT00940000165434	ENSGT00940000153582.a.m.b	ENSGT00390000014084 #22	ENSGT01030000234578.B.a #23	ENSGT00390000006747 #24	ENSGT00950000183117.a.a #26	ENSGT00940000158254 #27	ENSGT00940000155067.b.a ##28	ENSGT00940000155067.a #28	ENSGT00650000094663	ENSGT00390000002730.e.b	ENSGT00950000183113.b.b.c.b	ENSGT00940000160161.e.a	ENSGT00940000153414.A	ENSGT00940000157821.h.a	ENSGT00940000160821	ENSGT00940000163946.a	ENSGT00940000155180.b.b
Perciformes_a	ANCESTRAL SPECIES	19	ENSGT00940000157835	ENSGT00940000157710	ENSGT00940000154572.h	ENSGT00600000084428.b	ENSGT00950000183116.a.a	ENSGT00390000015968	ENSGT00500000045001	ENSGT00940000158466	ENSGT00950000182973.a.c.b	ENSGT00940000156720	ENSGT01030000234980	ENSGT00390000013715	ENSGT00950000183017.b.b.a.a	ENSGT00940000165434	ENSGT00940000153582.a.m.b	ENSGT00390000014084 #22	ENSGT01030000234578.B.a #23	ENSGT00390000006747 #24	ENSGT00950000183117.a.a #26	ENSGT00940000158254 #27	ENSGT00940000155067.b.a ##28	ENSGT00940000155067.a #28	ENSGT00650000094663	ENSGT00390000002730.e.b	ENSGT00950000183113.b.b.c.b	ENSGT00940000160161.e.a	ENSGT00940000153414.A	ENSGT00940000157821.h.a	ENSGT00940000160821	ENSGT00940000163946.a	ENSGT00940000155180.b.b
Pike perch	MODERN SPECIES	28	MTERF2 (ENSSLUG00000003583)	syt10 (ENSSLUG00000003569)	ENSSLUG00000003558	ENSSLUG00000002793	cyb5r3 (ENSSLUG00000002598)	syt1a (ENSSLUG00000002503)	pawr (ENSSLUG00000002488)	ppp1r12a (ENSSLUG00000002356)	rps16 (ENSSLUG00000002321)	myf6 (ENSSLUG00000002312)	Myf5 (ENSSLUG00000002308)	lin7a (ENSSLUG00000002301)	ACSS3 (ENSSLUG00000001953)	ppfia2 (ENSSLUG00000001812)	ENSSLUG00000001721	washc3 (ENSSLUG00000001679) #22	dram1 (ENSSLUG00000001669) #23	gnptab (ENSSLUG00000001622) #24	chpt1 (ENSSLUG00000020879) #26	mybpc1 (ENSSLUG00000018517) #27	ENSSLUG00000018418 ##28	spic (ENSSLUG00000018413) #28	atp6v1e1b (ENSSLUG00000018403)	ADA2 (ENSSLUG00000018400)	GALNT8 (ENSSLUG00000018206)	rad51ap1 (ENSSLUG00000018171)	fgf6b (ENSSLUG00000018163)	fgf23 (ENSSLUG00000018159)	tigarb (ENSSLUG00000018156)	ccnd2b (ENSSLUG00000018150)	ENSSLUG00000018146
Channel bull blenny	MODERN SPECIES	15	ft2 (ENSCGOG00000017724)	tcp11l2 (ENSCGOG00000017725)	apaf1 (ENSCGOG00000017773)	anks1b (ENSCGOG00000018750)	ENSCGOG00000018925	uhrf1bp1l (ENSCGOG00000018932)	ENSCGOG00000019154	IKBIP (ENSCGOG00000019151)	arfgap3 (ENSCGOG00000019165)	pacsin2 (ENSCGOG00000019377)	ttll1 (ENSCGOG00000019575)	mcat (ENSCGOG00000019581)	ENSCGOG00000019583	ENSCGOG00000019585	ENSCGOG00000019606	washc3 (ENSCGOG00000019618) #22	ENSCGOG00000019619	si:dkeyp-38g8.5 (ENSCGOG00000019621)	epyc (ENSCGOG00000019622)	kera (ENSCGOG00000019628)	lum (ENSCGOG00000019634)	dcn (ENSCGOG00000019639)	ENSCGOG00000019675	btg1 (ENSCGOG00000019694)	fam3c (ENSCGOG00000019696)	ENSCGOG00000019702	impdh1b (ENSCGOG00000019758)	ENSCGOG00000021528	si:dkey-5i3.5 (ENSCGOG00000021529)	ENSCGOG00000021531	snd1 (ENSCGOG00000021564)
Cottioidei	ANCESTRAL SPECIES	19	ENSGT00940000157835	ENSGT00940000157710	ENSGT00940000154572.h	ENSGT00600000084428.b	ENSGT00950000183116.a.a	ENSGT00390000015968	ENSGT00500000045001	ENSGT00940000158466	ENSGT00950000182973.a.c.b	ENSGT00940000156720	ENSGT00390000013715	ENSGT00950000183017.b.b.a.a	ENSGT00940000165434	ENSGT00950000183169.B	ENSGT00400000022326.b.b.b	ENSGT00390000014084 #22	ENSGT01030000234578.B.a #23	ENSGT00390000006747 #24	ENSGT00950000183117.a.a #26	ENSGT00940000158254 #27	ENSGT00940000155067.b.a ##28	ENSGT00940000155067.a #28	ENSGT00650000094663	ENSGT00390000002730.e.b	ENSGT00950000183113.b.b.c.b	ENSGT00940000160161.e.a	ENSGT00940000153414.A	ENSGT00940000157821.h.a	ENSGT00940000160821	ENSGT00940000163946.a	ENSGT00940000155180.b.b
Lumpfish	MODERN SPECIES	15	cry1a (ENSCLMG00005018166)	ENSCLMG00005018160	apaf1 (ENSCLMG00005016672)	anks1b (ENSCLMG00005016584)	uhrf1bp1l (ENSCLMG00005016536)	ENSCLMG00005016528	ENSCLMG00005016527	arfgap3 (ENSCLMG00005016508)	pacsin2 (ENSCLMG00005016503)	ttll1 (ENSCLMG00005016502)	mcat (ENSCLMG00005016500)	ENSCLMG00005016498	ENSCLMG00005016474	ENSCLMG00005016472	ENSCLMG00005016471	washc3 (ENSCLMG00005016470) #22	dram1 (ENSCLMG00005016468) #23	gnptab (ENSCLMG00005016254) #24	chpt1 (ENSCLMG00005016241) #26	mybpc1 (ENSCLMG00005016235) #27	ENSCLMG00005016231 ##28	spic (ENSCLMG00005016229) #28	atp6v1e1b (ENSCLMG00005016223)	ADA2 (ENSCLMG00005016215)	ENSCLMG00005016196	ASCL4 (ENSCLMG00005016191)	ENSCLMG00005016190	sema3aa (ENSCLMG00005015353)	ENSCLMG00005015345	cacna2d1a (ENSCLMG00005015343)	ENSCLMG00005015342
Stickleback	MODERN SPECIES	3	tcp11l2 (ENSGACG00000019838)	apaf1 (ENSGACG00000019839)	anks1b (ENSGACG00000019843)	uhrf1bp1l (ENSGACG00000019845)	ENSGACG00000019849	ENSGACG00000019851	ENSGACG00000019853	arfgap3 (ENSGACG00000019855)	pacsin2 (ENSGACG00000019857)	ttll1 (ENSGACG00000019858)	mcat (ENSGACG00000019859)	ENSGACG00000019860	ENSGACG00000019862	ENSGACG00000019863	ENSGACG00000019864	washc3 (ENSGACG00000019865) #22	gnptab (ENSGACG00000019866) #24	chpt1 (ENSGACG00000019869) #26	mybpc1 (ENSGACG00000019879) #27	spic (ENSGACG00000019889) #28	ENSGACG00000019891	atp6v1e1b (ENSGACG00000019892)	ADA2 (ENSGACG00000019897)	GALNT8 (ENSGACG00000019901)	rad51ap1 (ENSGACG00000019903)	fgf6b (ENSGACG00000019904)	fgf23 (ENSGACG00000019905)	tigarb (ENSGACG00000019907)	ccnd2b (ENSGACG00000019909)	ENSGACG00000019912	ENSGACG00000019914
Eupecaria_C	ANCESTRAL SPECIES	18	ENSGT00940000157835	ENSGT00940000157710	ENSGT00940000154572.h	ENSGT00600000084428.b	ENSGT00950000183116.a.a	ENSGT00390000015968	ENSGT00500000045001	ENSGT00940000158466	ENSGT00950000182973.a.c.b	ENSGT00940000156720	ENSGT01030000234980	ENSGT00390000013715	ENSGT00950000183017.b.b.a.a	ENSGT00940000165434	ENSGT00940000153582.a.m.b	ENSGT00390000014084 #22	ENSGT01030000234578.B.a #23	ENSGT00390000006747 #24	ENSGT00950000183117.a.a #26	ENSGT00940000158254 #27	ENSGT00940000155067.b.a ##28	ENSGT00940000155067.a #28	ENSGT00650000094663	ENSGT00390000002730.e.b	ENSGT00950000183113.b.b.c.b	ENSGT00940000160161.e.a	ENSGT00940000153414.A	ENSGT00940000157821.h.a	ENSGT00940000160821	ENSGT00940000163946.a	ENSGT00940000155180.b.b
Eupercaria_incertae_sedis	ANCESTRAL SPECIES	22	ENSGT00940000157835	ENSGT00940000157710	ENSGT00940000154572.h	ENSGT00600000084428.b	ENSGT00950000183116.a.a	ENSGT00390000015968	ENSGT00500000045001	ENSGT00940000158466	ENSGT00950000182973.a.c.b	ENSGT00940000156720	ENSGT01030000234980	ENSGT00390000013715	ENSGT00950000183017.b.b.a.a	ENSGT00940000165434	ENSGT00940000153582.a.m.b	ENSGT00390000014084 #22	ENSGT01030000234578.B.a #23	ENSGT00390000006747 #24	ENSGT00950000183117.a.a #26	ENSGT00940000158254 #27	ENSGT00940000155067.b.a ##28	ENSGT00940000155067.a #28	ENSGT00650000094663	ENSGT00390000002730.e.b	ENSGT00950000183113.b.b.c.b	ENSGT00940000160161.e.a	ENSGT00940000153414.A	ENSGT00940000157821.h.a	ENSGT00940000160821	ENSGT00940000163946.a	ENSGT00940000155180.b.b
Large yellow croaker	MODERN SPECIES	491	tcp11l2 (ENSLCRG00005006367)	apaf1 (ENSLCRG00005006390)	anks1b (ENSLCRG00005006505)	uhrf1bp1l (ENSLCRG00005006536)	ENSLCRG00005007711	ENSLCRG00005007712	ENSLCRG00005007713	arfgap3 (ENSLCRG00005010696)	pacsin2 (ENSLCRG00005010714)	ttll1 (ENSLCRG00005010717)	ENSLCRG00005010718	mcat (ENSLCRG00005010719)	ENSLCRG00005010721	ENSLCRG00005010723	ENSLCRG00005010782	washc3 (ENSLCRG00005010784) #22	dram1 (ENSLCRG00005010785) #23	gnptab (ENSLCRG00005010787) #24	chpt1 (ENSLCRG00005010829) #26	mybpc1 (ENSLCRG00005010856) #27	ENSLCRG00005013750 ##28	spic (ENSLCRG00005013751) #28	ENSLCRG00005013752	atp6v1e1b (ENSLCRG00005013754)	ADA2 (ENSLCRG00005013793)	GALNT8 (ENSLCRG00005013804)	rad51ap1 (ENSLCRG00005013923)	fgf6b (ENSLCRG00005013924)	fgf23 (ENSLCRG00005013925)	tigarb (ENSLCRG00005013926)	ccnd2b (ENSLCRG00005013927)
Gilthead seabream	MODERN SPECIES	5	tcp11l2 (ENSSAUG00010012162)	apaf1 (ENSSAUG00010012185)	anks1b (ENSSAUG00010012290)	uhrf1bp1l (ENSSAUG00010012328)	ENSSAUG00010012583	ENSSAUG00010012586	ENSSAUG00010012587	arfgap3 (ENSSAUG00010012591)	pacsin2 (ENSSAUG00010012595)	ttll1 (ENSSAUG00010012614)	ENSSAUG00010012617	mcat (ENSSAUG00010012618)	ENSSAUG00010012620	ENSSAUG00010012622	ENSSAUG00010012626	washc3 (ENSSAUG00010012629) #22	dram1 (ENSSAUG00010012634) #23	gnptab (ENSSAUG00010012649) #24	chpt1 (ENSSAUG00010012670) #26	mybpc1 (ENSSAUG00010012703) #27	ENSSAUG00010012945 ##28	spic (ENSSAUG00010012948) #28	atp6v1e1b (ENSSAUG00010012955)	ADA2 (ENSSAUG00010012988)	GALNT8 (ENSSAUG00010012997)	rad51ap1 (ENSSAUG00010013093)	fgf6b (ENSSAUG00010013095)	fgf23 (ENSSAUG00010013096)	tigarb (ENSSAUG00010013098)	ccnd2b (ENSSAUG00010013100)	ENSSAUG00010013101
Percomorphaceae_D	ANCESTRAL SPECIES	22	ENSGT00940000157710	ENSGT00940000154572.g.b	ENSGT00940000154572.h	ENSGT00600000084428.b	ENSGT00950000183116.a.a	ENSGT00390000015968	ENSGT00500000045001	ENSGT00940000158466	ENSGT00950000182973.a.c.b	ENSGT00940000156720	ENSGT01030000234980	ENSGT00390000013715	ENSGT00950000183017.b.b.a.a	ENSGT00940000165434	ENSGT00940000153582.a.m.b	ENSGT00390000014084 #22	ENSGT01030000234578.B.a #23	ENSGT00390000006747 #24	ENSGT00950000183117.a.a #26	ENSGT00940000158254 #27	ENSGT00940000155067.b.a ##28	ENSGT00940000155067.a #28	ENSGT00650000094663	ENSGT00390000002730.e.b	ENSGT00950000183113.b.b.c.b	ENSGT00940000160161.e.a	ENSGT00940000153414.A	ENSGT00940000157821.h.a	ENSGT00940000160821	ENSGT00940000163946.a	ENSGT00940000155180.b.b
Anabantaria	ANCESTRAL SPECIES	21	ENSGT00940000154572.h	ENSGT00600000084428.b	ENSGT00950000183116.a.a	ENSGT00390000015968	ENSGT00500000045001	ENSGT00940000158466	ENSGT00950000182973.a.c.b	ENSGT00940000156720	ENSGT01030000234980	ENSGT00390000013715	ENSGT00950000183017.b.b.a.a	ENSGT00940000165434	ENSGT01100000263519.E.b.b	ENSGT00940000168691	ENSGT00950000183169.B	ENSGT00390000014084 #22	ENSGT01030000234578.B.a #23	ENSGT00390000006747 #24	ENSGT00950000183117.a.a #26	ENSGT00940000158254 #27	ENSGT00940000155067.b.a ##28	ENSGT00940000155067.a #28	ENSGT00650000094663	ENSGT00390000002730.e.b	ENSGT00950000183113.b.b.c.b	ENSGT00940000160161.e.a	ENSGT00940000153414.A	ENSGT00940000157821.h.a	ENSGT00940000160821	ENSGT00940000163946.a	ENSGT00940000155180.b.b
Zig-zag eel	MODERN SPECIES	15	ENSMAMG00000012270	apaf1 (ENSMAMG00000012291)	ENSMAMG00000012379	ENSMAMG00000012493	uhrf1bp1l (ENSMAMG00000012506)	ENSMAMG00000012548	ENSMAMG00000012559	IKBIP (ENSMAMG00000024576)	arfgap3 (ENSMAMG00000012603)	pacsin2 (ENSMAMG00000012636)	ttll1 (ENSMAMG00000012675)	MCAT (ENSMAMG00000026461)	ENSMAMG00000012716	ENSMAMG00000012729	ENSMAMG00000012734	washc3 (ENSMAMG00000012747) #22	dram1 (ENSMAMG00000028429) #23	gnptab (ENSMAMG00000012781) #24	chpt1 (ENSMAMG00000012846) #26	mybpc1 (ENSMAMG00000012896) #27	ENSMAMG00000012991 ##28	spic (ENSMAMG00000012999) #28	atp6v1e1b (ENSMAMG00000013022)	ENSMAMG00000013065	ENSMAMG00000013101	rad51ap1 (ENSMAMG00000013332)	FGF6 (ENSMAMG00000028148)	ENSMAMG00000013352	ENSMAMG00000013365	CCND2 (ENSMAMG00000013383)	ENSMAMG00000013390
Carangaria	ANCESTRAL SPECIES	22	ENSGT00940000157710	ENSGT00940000154572.g.b	ENSGT00940000154572.h	ENSGT00950000183116.a.a	ENSGT00600000084428.b	ENSGT00390000015968	ENSGT00500000045001	ENSGT00940000158466	ENSGT00950000182973.a.c.b	ENSGT00940000156720	ENSGT01030000234980	ENSGT00390000013715	ENSGT00950000183017.b.b.a.a	ENSGT00940000165434	ENSGT00940000153582.a.m.b	ENSGT00390000014084 #22	ENSGT01030000234578.B.a #23	ENSGT00390000006747 #24	ENSGT00950000183117.a.a #26	ENSGT00940000158254 #27	ENSGT00940000155067.b.a ##28	ENSGT00940000155067.a #28	ENSGT00650000094663	ENSGT00390000002730.e.b	ENSGT00950000183113.b.b.c.b	ENSGT00940000160161.e.a	ENSGT00940000153414.A	ENSGT00940000157821.h.a	ENSGT00940000160821	ENSGT00940000163946.a	ENSGT00940000155180.b.b
Pleuronectoidei	ANCESTRAL SPECIES	16	ENSGT00940000157710	ENSGT00940000154572.g.b	ENSGT00940000154572.h	ENSGT00600000084428.b	ENSGT00390000015968	ENSGT00500000045001	ENSGT00940000158466	ENSGT00950000182973.a.c.b	ENSGT00940000156720	ENSGT00390000013715	ENSGT01030000234980	ENSGT00950000183017.b.b.a.a	ENSGT00940000165434	ENSGT01100000263519.E.b.b	ENSGT00940000168691	ENSGT00390000014084 #22	ENSGT01030000234578.B.a #23	ENSGT00390000006747 #24	ENSGT00950000183117.a.a #26	ENSGT00940000158254 #27	ENSGT00940000155067.b.a ##28	ENSGT00940000155067.a #28	ENSGT00390000002730.e.b	ENSGT00950000183113.b.b.c.b	ENSGT00940000160161.e.a	ENSGT00940000175357	ENSGT00940000153414.A	ENSGT00940000157821.h.a	ENSGT00940000160821	ENSGT00940000163946.a	ENSGT00940000155180.b.b
Tongue sole	MODERN SPECIES	18	tcp11l2 (ENSCSEG00000006496)	apaf1 (ENSCSEG00000006505)	ENSCSEG00000006543	ENSCSEG00000006545	ENSCSEG00000006550	uhrf1bp1l (ENSCSEG00000006558)	ENSCSEG00000006597	ENSCSEG00000006608	arfgap3 (ENSCSEG00000006615)	pacsin2 (ENSCSEG00000006637)	ttll1 (ENSCSEG00000006650)	mcat (ENSCSEG00000006666)	ENSCSEG00000006676	ENSCSEG00000006703	ENSCSEG00000006766	washc3 (ENSCSEG00000006781) #22	dram1 (ENSCSEG00000006790) #23	gnptab (ENSCSEG00000006807) #24	chpt1 (ENSCSEG00000006843) #26	mybpc1 (ENSCSEG00000006852) #27	ENSCSEG00000006866 ##28	spic (ENSCSEG00000006869) #28	atp6v1e1b (ENSCSEG00000006883)	ADA2 (ENSCSEG00000006894)	rad51ap1 (ENSCSEG00000006902)	fgf6b (ENSCSEG00000006910)	fgf23 (ENSCSEG00000006918)	tigarb (ENSCSEG00000006923)	ccnd2b (ENSCSEG00000006945)	ENSCSEG00000006980	llph (ENSCSEG00000006991)
Carangaria_A	ANCESTRAL SPECIES	21	ENSGT00940000157835	ENSGT00940000157710	ENSGT00940000154572.h	ENSGT00950000183116.a.a	ENSGT00600000084428.b	ENSGT00390000015968	ENSGT00500000045001	ENSGT00940000158466	ENSGT00950000182973.a.c.b	ENSGT00940000156720	ENSGT01030000234980	ENSGT00390000013715	ENSGT00950000183017.b.b.a.a	ENSGT00940000165434	ENSGT00940000153582.a.m.b	ENSGT00390000014084 #22	ENSGT01030000234578.B.a #23	ENSGT00390000006747 #24	ENSGT00950000183117.a.a #26	ENSGT00940000158254 #27	ENSGT00940000155067.b.a ##28	ENSGT00940000155067.a #28	ENSGT00650000094663	ENSGT00390000002730.e.b	ENSGT00950000183113.b.b.c.b	ENSGT00940000160161.e.a	ENSGT00940000153414.A	ENSGT00940000157821.h.a	ENSGT00940000160821	ENSGT00940000163946.a	ENSGT00940000155180.b.b
Seriola	ANCESTRAL SPECIES	9	ENSGT00950000182976.a.a	ENSGT00940000155095.i.b.b	ENSGT00940000157835	ENSGT00940000157710	ENSGT00940000154572.h	ENSGT00600000084428.b	ENSGT00390000015968	ENSGT00500000045001	ENSGT00940000158466	ENSGT00950000182973.a.c.b	ENSGT00940000156720	ENSGT00390000013715	ENSGT00950000183017.b.b.a.a	ENSGT00940000165434	ENSGT00940000153582.a.m.b	ENSGT00390000014084 #22	ENSGT01030000234578.B.a #23	ENSGT00390000006747 #24	ENSGT00950000183117.a.a #26	ENSGT00940000158254 #27	ENSGT00940000155067.b.a ##28	ENSGT00940000155067.a #28	ENSGT00390000002730.e.b	ENSGT00950000183113.b.b.c.b	ENSGT00940000160161.e.a	ENSGT00940000153414.A	ENSGT00940000157821.h.a	ENSGT00940000160821	ENSGT00940000163946.a	ENSGT00940000155180.b.b	ENSGT00940000165907
Greater amberjack	MODERN SPECIES	60	FUT9 (ENSSDUG00000001739)	tcp11l2 (ENSSDUG00000001701)	apaf1 (ENSSDUG00000001603)	anks1b (ENSSDUG00000001484)	ENSSDUG00000001449	uhrf1bp1l (ENSSDUG00000001171)	ENSSDUG00000001133	ENSSDUG00000001128	arfgap3 (ENSSDUG00000001101)	pacsin2 (ENSSDUG00000001035)	ttll1 (ENSSDUG00000000990)	mcat (ENSSDUG00000000979)	ENSSDUG00000000963	ENSSDUG00000000832	ENSSDUG00000000821	washc3 (ENSSDUG00000000785) #22	dram1 (ENSSDUG00000000760) #23	gnptab (ENSSDUG00000000679) #24	chpt1 (ENSSDUG00000000642) #26	mybpc1 (ENSSDUG00000000563) #27	ENSSDUG00000000543 ##28	spic (ENSSDUG00000000538) #28	atp6v1e1b (ENSSDUG00000000530)	ADA2 (ENSSDUG00000000494)	GALNT8 (ENSSDUG00000000286)	rad51ap1 (ENSSDUG00000000222)	fgf6b (ENSSDUG00000000201)	fgf23 (ENSSDUG00000000184)	tigarb (ENSSDUG00000000151)	ccnd2b (ENSSDUG00000000100)	ENSSDUG00000019569
Yellowtail amberjack	MODERN SPECIES	2783	FUT9 (ENSSLDG00000020741)	tcp11l2 (ENSSLDG00000020756)	apaf1 (ENSSLDG00000020771)	anks1b (ENSSLDG00000020801)	uhrf1bp1l (ENSSLDG00000020881)	ENSSLDG00000021041	ENSSLDG00000021069	ENSSLDG00000021056	arfgap3 (ENSSLDG00000021108)	pacsin2 (ENSSLDG00000021199)	ttll1 (ENSSLDG00000021285)	mcat (ENSSLDG00000021309)	ENSSLDG00000021345	ENSSLDG00000021393	ENSSLDG00000021415	washc3 (ENSSLDG00000021435) #22	dram1 (ENSSLDG00000021453) #23	gnptab (ENSSLDG00000021469) #24	ENSSLDG00000021504 #24	chpt1 (ENSSLDG00000021517) #26	mybpc1 (ENSSLDG00000021568) #27	ENSSLDG00000021834 ##28	spic (ENSSLDG00000021842) #28	atp6v1e1b (ENSSLDG00000021864)
Barramundi perch	MODERN SPECIES	365			anks1b (ENSLCAG00010023194)	ENSLCAG00010023171	uhrf1bp1l (ENSLCAG00010023154)	ENSLCAG00010023143	IKBIP (ENSLCAG00010023140)	arfgap3 (ENSLCAG00010023086)	pacsin2 (ENSLCAG00010023058)	ttll1 (ENSLCAG00010023046)	ENSLCAG00010023040	mcat (ENSLCAG00010023037)	ENSLCAG00010023032	ENSLCAG00010023028	ENSLCAG00010023019	washc3 (ENSLCAG00010023012) #22	dram1 (ENSLCAG00010023009) #23	gnptab (ENSLCAG00010023003) #24	ENSLCAG00010022990	chpt1 (ENSLCAG00010022983) #26	mybpc1 (ENSLCAG00010022931) #27	ENSLCAG00010022906 ##28	spic (ENSLCAG00010022903) #28	ENSLCAG00010022902	atp6v1e1b (ENSLCAG00010022879)	ADA2 (ENSLCAG00010022872)	GALNT8 (ENSLCAG00010022869)	rad51ap1 (ENSLCAG00010022866)
Pinecone sodierfish	MODERN SPECIES	15	FUT9 (ENSMMDG00005015886)	tcp11l2 (ENSMMDG00005015882)	apaf1 (ENSMMDG00005015800)	anks1b (ENSMMDG00005014962)	ENSMMDG00005014954	uhrf1bp1l (ENSMMDG00005014951)	ENSMMDG00005014949	ENSMMDG00005014948	arfgap3 (ENSMMDG00005014940)	pacsin2 (ENSMMDG00005014911)	ttll1 (ENSMMDG00005014906)	mcat (ENSMMDG00005014903)	ENSMMDG00005014888	ENSMMDG00005014885	ENSMMDG00005014883	washc3 (ENSMMDG00005014879) #22	dram1 (ENSMMDG00005014664) #23	gnptab (ENSMMDG00005014597) #24	chpt1 (ENSMMDG00005014530) #26	mybpc1 (ENSMMDG00005014521) #27	spic (ENSMMDG00005014520) #28	ENSMMDG00005014519	atp6v1e1b (ENSMMDG00005014514)	ADA2 (ENSMMDG00005014512)	GALNT8 (ENSMMDG00005023287)	rad51ap1 (ENSMMDG00005023284)	fgf6b (ENSMMDG00005023283)	fgf23 (ENSMMDG00005023262)	tigarb (ENSMMDG00005023257)	ccnd2b (ENSMMDG00005023255)	ENSMMDG00005023251
Protacanthopterygii	ANCESTRAL SPECIES	23	ENSGT00390000008645	ENSGT00940000158225.i.a	ENSGT00940000154983.c.b	ENSGT00940000160124	ENSGT00950000182999.b.a.a	ENSGT00390000005378	ENSGT00940000166611	ENSGT00950000182885.B #17	ENSGT00950000182885.C.b ##17	ENSGT00390000010777 #21	ENSGT00390000006088 #20	ENSGT00390000004984.b #19	ENSGT00940000159081.s.b #18	ENSGT00940000168896	ENSGT00940000159081.s.a #18	ENSGT00390000014084 #22	ENSGT01030000234578.B.a #23	ENSGT00390000006747 #24	ENSGT00950000183117.a.a #26	ENSGT00940000158254 #27	ENSGT00940000155067.b.a ##28	ENSGT00940000155067.a #28	ENSGT00650000094663	ENSGT00390000002730.e.b	ENSGT00950000183113.b.b.c.b	ENSGT00940000160161.e.a	ENSGT00940000159401.d.d	ENSGT00940000153414.A	ENSGT00940000157821.h.a	ENSGT00940000160821	ENSGT00940000163946.a
Salmoninae	DUPLICATION
Salmoninae	ANCESTRAL SPECIES	81	ENSGT00940000154983.c.b.`b.a	ENSGT00940000160124.c	ENSGT00940000158225.i.a.c.b	ENSGT00940000154983.c.b.`b.b	ENSGT00940000160124.d	ENSGT00950000182999.b.a.a	ENSGT00390000005378	ENSGT00940000166611.d	ENSGT00950000182885.B.d #17	ENSGT00950000182885.C.b.e ##17	ENSGT00390000010777.i #21	ENSGT00390000006088.j #20	ENSGT00940000168896	ENSGT00940000159081.s.b.b.b #18	ENSGT00940000159081.s.b.a #18	ENSGT00390000014084.e #22	ENSGT01030000234578.B.a.g.a.b #23	ENSGT00390000006747 #24	ENSGT00950000183117.a.a.h #26	ENSGT00940000158254.f #27	ENSGT00940000155067.a.z #28	ENSGT00650000094663	ENSGT00390000002730.e.b.c	ENSGT00950000183113.b.b.c.b.k	ENSGT00940000160161.e.a.m.a	ENSGT00940000159401.d.d.a	ENSGT00940000153414.A.e.a	ENSGT00940000157821.h.a.c	ENSGT00940000160821.d.b	ENSGT00940000163946.a.e	ENSGT00940000155180.b.b.e
Salmoninae_a	ANCESTRAL SPECIES	75	ENSGT00940000156615.a.f	ENSGT00940000154818.e.a.b	ENSGT00390000008645.h.a	ENSGT00940000158225.i.a.c.b	ENSGT00940000154983.c.b.`b.b	ENSGT00940000160124.d	ENSGT00950000182999.b.a.a.m	ENSGT00390000005378.j	ENSGT00940000166611.d.b	ENSGT00950000182885.B.d #17	ENSGT00950000182885.C.b.f ##17	ENSGT00390000010777.j #21	ENSGT00390000006088.i #20	ENSGT00940000168896.d	ENSGT00940000159081.s.b.a #18	ENSGT00390000014084.e #22	ENSGT01030000234578.B.a.g.a.b #23	ENSGT00390000006747.p #24	ENSGT00950000183117.a.a.h #26	ENSGT00940000158254.f #27	ENSGT00940000155067.b.a.d.b ##28	ENSGT00940000155067.a.z #28	ENSGT00650000094663.b	ENSGT00390000002730.e.b.c	ENSGT00950000183113.b.b.c.b.k	ENSGT00940000160161.e.a.m.a	ENSGT00940000159401.d.d.a	ENSGT00940000153414.A.e.a	ENSGT00940000157821.h.a.c	ENSGT00940000160821.d.b.c	ENSGT00940000163946.a.e
Salmo	ANCESTRAL SPECIES	25	ENSGT00940000156615.a.f	ENSGT00940000154818.e.a.b	ENSGT00390000008645.h.a	ENSGT00940000158225.i.a.c.b	ENSGT00940000154983.c.b.`b.b	ENSGT00940000160124.d	ENSGT00950000182999.b.a.a.n	ENSGT00390000005378.j	ENSGT00940000166611.d.b	ENSGT00950000182885.B.d #17	ENSGT00950000182885.C.b.f ##17	ENSGT00390000010777.j #21	ENSGT00390000006088.i #20	ENSGT00940000168896.d	ENSGT00940000159081.s.b.b.b #18	ENSGT00390000014084.e #22	ENSGT01030000234578.B.a.g.a.b #23	ENSGT00390000006747.p #24	ENSGT00950000183117.a.a.h #26	ENSGT00940000158254.f #27	ENSGT00940000155067.b.a.d.b ##28	ENSGT00940000155067.a.z #28	ENSGT00650000094663.b	ENSGT00390000002730.e.b.c	ENSGT00950000183113.b.b.c.b.k	ENSGT00940000160161.e.a.m.a.d	ENSGT00940000160161.e.a.m.a.c	ENSGT00940000159401.d.d.a	ENSGT00940000153414.A.e.a	ENSGT00940000157821.h.a.c	ENSGT00940000160821.d.b.d
River trout	MODERN SPECIES	38	ntn4 (ENSSTUG00000026832)	snrpf (ENSSTUG00000026820)	amdhd1 (ENSSTUG00000026807)	tspan9b (ENSSTUG00000026783)	ELAPOR2 (ENSSTUG00000023331)	klhl42 (ENSSTUG00000023234)	ENSSTUG00000023224	nrip2 (ENSSTUG00000023213)	itfg2 (ENSSTUG00000023113)	ascl1a (ENSSTUG00000023105)	th2 (ENSSTUG00000021251) ##17	nup37 (ENSSTUG00000020911) #21	parpbp (ENSSTUG00000020858) #20	ENSSTUG00000020854	igf1 (ENSSTUG00000020604) #18	washc3 (ENSSTUG00000020568) #22	dram1 (ENSSTUG00000020559) #23	gnptab (ENSSTUG00000019408) #24	chpt1 (ENSSTUG00000019195) #26	mybpc1 (ENSSTUG00000018454) #27	ENSSTUG00000018414 ##28	spic (ENSSTUG00000018410) #28	ENSSTUG00000018398	atp6v1e1b (ENSSTUG00000018380)	ADA2 (ENSSTUG00000018295)	GALNT8 (ENSSTUG00000018260)	GALNT8 (ENSSTUG00000018232)	GALNT8 (ENSSTUG00000018210)	GALNT8 (ENSSTUG00000018184)	DYRK4 (ENSSTUG00000018072)	rad51ap1 (ENSSTUG00000018041)
Atlantic salmon	MODERN SPECIES	26	SNRPF (ENSSSAG00000105295)	ENSSSAG00000048610	ENSSSAG00000107602	ENSSSAG00000111243	ENSSSAG00000096376	ENSSSAG00000046203	ENSSSAG00000119071	pah (ENSSSAG00000045956) #17	th2 (ENSSSAG00000045042) ##17	nup37 (ENSSSAG00000044831) #21	parpbp (ENSSSAG00000044750) #20	ENSSSAG00000107811	ENSSSAG00000081749	ENSSSAG00000120885	IGF1 (ENSSSAG00000044375) #18	washc3 (ENSSSAG00000044345) #22	dram1 (ENSSSAG00000044327) #23	gnptab (ENSSSAG00000043341) #24	chpt1 (ENSSSAG00000089632) #26	mybpc1 (ENSSSAG00000003533) #27	ENSSSAG00000002961 ##28	spic (ENSSSAG00000002954) #28	ENSSSAG00000002945	atp6v1e1b (ENSSSAG00000116109)	ENSSSAG00000002687	ENSSSAG00000002881	GALNT8 (ENSSSAG00000096659)	DYRK4 (ENSSSAG00000046312)	rad51ap1 (ENSSSAG00000002591)	FGF6 (ENSSSAG00000108638)	FGF23 (ENSSSAG00000002565)
Oncorhynchus	ANCESTRAL SPECIES	9	ENSGT00940000156615.a.f	ENSGT00940000154818.e.a.a	ENSGT00390000008645.h.a	ENSGT00940000158225.i.a.c.b	ENSGT00940000154983.c.b.`b.b	ENSGT00940000160124.d	ENSGT00950000182999.b.a.a.m	ENSGT00390000005378.j	ENSGT00940000166611.d.b	ENSGT00950000182885.B.d.b #17	ENSGT00950000182885.C.b.f ##17	ENSGT00390000010777.j #21	ENSGT00390000006088.i #20	ENSGT00940000168896.d	ENSGT00940000159081.s.b.a.a #18	ENSGT00390000014084.e #22	ENSGT01030000234578.B.a.g.a.b #23	ENSGT00390000006747.p #24	ENSGT00950000183117.a.a.h #26	ENSGT00940000158254.f #27	ENSGT00940000155067.b.a.d.b ##28	ENSGT00940000155067.a.z #28	ENSGT00650000094663.b	ENSGT00390000002730.e.b.c	ENSGT00950000183113.b.b.c.b.k	ENSGT00940000160161.e.a.m.a.a	ENSGT00940000159401.d.d.a	ENSGT00940000153414.A.e.a	ENSGT00940000157821.h.a.c	ENSGT00940000160821.d.b.c	ENSGT00940000163946.a.e
Oncorhynchus_a	ANCESTRAL SPECIES	64	ENSGT00940000156615.a.f	ENSGT00940000164757.b	ENSGT00390000008645.h.a	ENSGT00940000158225.i.a.c.b	ENSGT00940000154983.c.b.`b.b	ENSGT00940000160124.d	ENSGT00950000182999.b.a.a.m	ENSGT00390000005378.j	ENSGT00940000166611.d.b	ENSGT00950000182885.B.d.b #17	ENSGT00950000182885.C.b.f ##17	ENSGT00390000010777.j #21	ENSGT00390000006088.i #20	ENSGT00940000168896.d	ENSGT00940000159081.s.b.a.a #18	ENSGT00390000014084.e #22	ENSGT01030000234578.B.a.g.a.b #23	ENSGT00390000006747.p #24	ENSGT00950000183117.a.a.h #26	ENSGT00940000158254.f #27	ENSGT00940000155067.b.a.d.b ##28	ENSGT00940000155067.a.z #28	ENSGT00650000094663.b	ENSGT00390000002730.e.b.c	ENSGT00950000183113.b.b.c.b.k	ENSGT00940000160161.e.a.m.a.a	ENSGT00940000159401.d.d.a	ENSGT00940000153414.A.e.a	ENSGT00940000157821.h.a.c	ENSGT00940000160821.d.b.c	ENSGT00940000163946.a.e
Coho salmon	MODERN SPECIES	29	NTN4 (ENSOKIG00005022451)	ENSOKIG00005022464	amdhd1 (ENSOKIG00005022484)	tspan9b (ENSOKIG00005022504)	ELAPOR2 (ENSOKIG00005022714)	klhl42 (ENSOKIG00005023710)	ENSOKIG00005023729	itfg2 (ENSOKIG00005023741)	ENSOKIG00005023760	pah (ENSOKIG00005023911) #17	th2 (ENSOKIG00005025899) ##17	nup37 (ENSOKIG00005026624) #21	parpbp (ENSOKIG00005026715) #20	ENSOKIG00005026748	igf1 (ENSOKIG00005026794) #18	washc3 (ENSOKIG00005027115) #22	dram1 (ENSOKIG00005027146) #23	gnptab (ENSOKIG00005027296) #24	chpt1 (ENSOKIG00005029016) #26	mybpc1 (ENSOKIG00005029297) #27	ENSOKIG00005030650 ##28	spic (ENSOKIG00005030681) #28	ENSOKIG00005030692	atp6v1e1b (ENSOKIG00005030717)	ADA2 (ENSOKIG00005030751)	GALNT8 (ENSOKIG00005030969)	DYRK4 (ENSOKIG00005031007)	rad51ap1 (ENSOKIG00005031433)	FGF6 (ENSOKIG00005031468)	FGF23 (ENSOKIG00005031488)	tigarb (ENSOKIG00005031500)
Chinook salmon	MODERN SPECIES	6	usp44 (ENSOTSG00005002893)	ntn4 (ENSOTSG00005002894)	ENSOTSG00005002904	amdhd1 (ENSOTSG00005002912)	tspan9b (ENSOTSG00005002932)	ELAPOR2 (ENSOTSG00005002955)	klhl42 (ENSOTSG00005003230)	nrip2 (ENSOTSG00005003233)	itfg2 (ENSOTSG00005003235)	ascl1a (ENSOTSG00005003242)	pah (ENSOTSG00005003250) #17	th2 (ENSOTSG00005003334) ##17	nup37 (ENSOTSG00005005743) #21	ENSOTSG00005005772	igf1 (ENSOTSG00005005780) #18	washc3 (ENSOTSG00005006733) #22	dram1 (ENSOTSG00005006735) #23	gnptab (ENSOTSG00005006744) #24	ENSOTSG00005007558	chpt1 (ENSOTSG00005007562) #26	mybpc1 (ENSOTSG00005007586) #27	ENSOTSG00005007587 ##28	spic (ENSOTSG00005007588) #28	ENSOTSG00005007590	atp6v1e1b (ENSOTSG00005007592)	ADA2 (ENSOTSG00005007597)	GALNT8 (ENSOTSG00005007620)	ENSOTSG00005007626	DYRK4 (ENSOTSG00005007630)	rad51ap1 (ENSOTSG00005008488)	fgf6b (ENSOTSG00005008490)
Huchen	MODERN SPECIES	168	ntn4 (ENSHHUG00000018470)	snrpf (ENSHHUG00000018483)	amdhd1 (ENSHHUG00000018661)	tspan9b (ENSHHUG00000018670)	ENSHHUG00000018711	klhl42 (ENSHHUG00000018789)	itfg2 (ENSHHUG00000018797)	nrip2 (ENSHHUG00000018932)	ascl1a (ENSHHUG00000018939)	pah (ENSHHUG00000018953) #17	th2 (ENSHHUG00000019771) ##17	nup37 (ENSHHUG00000019915) #21	parpbp (ENSHHUG00000020016) #20	pmch (ENSHHUG00000020021) #19	igf1 (ENSHHUG00000020076) #18	washc3 (ENSHHUG00000020822) #22	dram1 (ENSHHUG00000020829) #23	GNPTAB (ENSHHUG00000020855) #24	chpt1 (ENSHHUG00000020874) #26	mybpc1 (ENSHHUG00000020917) #27	atp6v1e1b (ENSHHUG00000022007)	spic (ENSHHUG00000022035) #28	ADA2 (ENSHHUG00000022050)	GALNT8 (ENSHHUG00000022068)	DYRK4 (ENSHHUG00000022276)	rad51ap1 (ENSHHUG00000022304)	fgf6b (ENSHHUG00000022315)	fgf23 (ENSHHUG00000022327)	tigarb (ENSHHUG00000022359)	ccnd2b (ENSHHUG00000022366)	ENSHHUG00000022387
Salmoninae	ANCESTRAL SPECIES	645									ENSGT00940000166611.c	ENSGT00950000182885.B.c #17	ENSGT00950000182885.C.b.f ##17	ENSGT00390000010777.j #21	ENSGT00390000006088.i #20	ENSGT00390000004984.b #19	ENSGT00940000159081.s.b.b.a #18	ENSGT00390000014084.f #22	ENSGT01030000234578.B.a.g.b #23	ENSGT00950000183117.a.a.g #26	ENSGT00940000158254.e #27	ENSGT00940000155067.b.a ##28	ENSGT00940000155067.a.y #28	ENSGT00390000002730.e.b.d
Huchen	MODERN SPECIES	2874																washc3 (ENSHHUG00000025047) #22	dram1 (ENSHHUG00000025050) #23	GNPTAB (ENSHHUG00000025066) #24	chpt1 (ENSHHUG00000025100) #26	mybpc1 (ENSHHUG00000025150) #27	spic (ENSHHUG00000025377) #28	atp6v1e1b (ENSHHUG00000025388)	ADA2 (ENSHHUG00000025490)
Salmoninae_a	ANCESTRAL SPECIES	11	ENSGT00940000160526.j	ENSGT00940000156615.a.e	ENSGT00940000154818.e.a.a	ENSGT00390000008645.h.b	ENSGT00940000158225.i.a.c.a	ENSGT00940000154983.c.b.`b.a	ENSGT00940000160124.c	ENSGT00950000182999.b.a.a.n	ENSGT00940000166611.c	ENSGT00950000182885.B.c #17	ENSGT00950000182885.C.b.e ##17	ENSGT00390000010777.i #21	ENSGT00390000006088.j #20	ENSGT00390000004984.b #19	ENSGT00940000159081.s.b.b.a #18	ENSGT00390000014084.f #22	ENSGT01030000234578.B.a.h #23	ENSGT01030000234578.B.a.g.b #23	ENSGT00390000006747.o #24	ENSGT00950000183117.a.a.g #26	ENSGT00940000158254.e #27	ENSGT00940000155067.b.a.c ##28	ENSGT00940000155067.a.y #28	ENSGT00650000094663.a	ENSGT00390000002730.e.b.d	ENSGT00950000183113.b.b.c.b.l	ENSGT00940000160161.e.a.m.b.b	ENSGT00940000160161.e.a.m.b.a	ENSGT00940000159401.d.d.b	ENSGT00940000153414.A.e.b	ENSGT00940000157821.h.a.d
Salmo	ANCESTRAL SPECIES	46	ENSGT00940000154818.e.a.a	ENSGT00390000008645.h.b	ENSGT00940000158225.i.a.d	ENSGT00940000158225.i.a.c.a	ENSGT00940000154983.c.b.`b.a	ENSGT00940000160124.c	ENSGT00950000182999.b.a.a.m	ENSGT00390000005378.i	ENSGT00940000166611.d.a	ENSGT00950000182885.B.c #17	ENSGT00950000182885.C.b.e ##17	ENSGT00390000010777.i #21	ENSGT00390000006088.j #20	ENSGT00390000004984.b #19	ENSGT00940000159081.s.b.b.a #18	ENSGT00390000014084.f #22	ENSGT01030000234578.B.a.h #23	ENSGT01030000234578.B.a.g.b #23	ENSGT00390000006747.o #24	ENSGT00950000183117.a.a.g #26	ENSGT00940000158254.e #27	ENSGT00940000155067.b.a.c ##28	ENSGT00940000155067.a.y #28	ENSGT00650000094663.a	ENSGT00390000002730.e.b.d	ENSGT00940000160161.e.a.m.b.b	ENSGT00940000160161.e.a.m.b.a	ENSGT00940000159401.d.d.b	ENSGT00940000153414.A.e.b	ENSGT00940000157821.h.a.d	ENSGT00940000160821.d.a
Atlantic salmon	MODERN SPECIES	8	USP44 (ENSSSAG00000057743)	ENSSSAG00000057693	ENSSSAG00000057684	ENSSSAG00000057672	ENSSSAG00000083161	klhl42 (ENSSSAG00000085425)	ENSSSAG00000055824	itfg2 (ENSSSAG00000055802)	ENSSSAG00000095127	pah (ENSSSAG00000097520) #17	th2 (ENSSSAG00000052064) ##17	nup37 (ENSSSAG00000051940) #21	parpbp (ENSSSAG00000051930) #20	pmch (ENSSSAG00000086642) #19	igf1 (ENSSSAG00000108388) #18	washc3 (ENSSSAG00000051495) #22	dram1 (ENSSSAG00000051485) #23	dram1 (ENSSSAG00000051450) #23	gnptab (ENSSSAG00000050497) #24	chpt1 (ENSSSAG00000105474) #26	mybpc1 (ENSSSAG00000047323) #27	spic (ENSSSAG00000082209) #28	ENSSSAG00000047278	VATE1 (ENSSSAG00000047230)	GALNT8 (ENSSSAG00000104480)	GALNT8 (ENSSSAG00000002843)	DYRK4 (ENSSSAG00000002634)	RAD51AP1 (ENSSSAG00000046281)	FGF6 (ENSSSAG00000105006)	ENSSSAG00000046118	FGF23 (ENSSSAG00000100656)
River trout	MODERN SPECIES	34	ntn4 (ENSSTUG00000030191)	snrpf (ENSSTUG00000030214)	amdhd1 (ENSSTUG00000030241)	tspan9b (ENSSTUG00000030251)	ENSSTUG00000030347	klhl42 (ENSSTUG00000033104)	nrip2 (ENSSTUG00000033130)	itfg2 (ENSSTUG00000033136)	ascl1a (ENSSTUG00000033213)	pah (ENSSTUG00000033266) #17	th2 (ENSSTUG00000035615) ##17	nup37 (ENSSTUG00000035950) #21	parpbp (ENSSTUG00000036036) #20	ENSSTUG00000036045	igf1 (ENSSTUG00000036076) #18	washc3 (ENSSTUG00000036582) #22	dram1 (ENSSTUG00000036604) #23	dram1 (ENSSTUG00000036613) #23	gnptab (ENSSTUG00000036683) #24	chpt1 (ENSSTUG00000038494) #26	mybpc1 (ENSSTUG00000038581) #27	ENSSTUG00000042770 ##28	spic (ENSSTUG00000042777) #28	ENSSTUG00000042791	atp6v1e1b (ENSSTUG00000042807)	GALNT8 (ENSSTUG00000042923)	DYRK4 (ENSSTUG00000043097)	rad51ap1 (ENSSTUG00000043364)	fgf6b (ENSSTUG00000043385)	fgf23 (ENSSTUG00000043394)	fgf23 (ENSSTUG00000043411)
Oncorhynchus	ANCESTRAL SPECIES	22	ENSGT00940000154818.e.a.b	ENSGT00940000164757.a	ENSGT00390000008645.h.b	ENSGT00940000158225.i.a.c.a	ENSGT00940000154983.c.b.`b.a	ENSGT00940000160124.c	ENSGT00950000182999.b.a.a.n	ENSGT00390000005378.i	ENSGT00940000166611.c	ENSGT00950000182885.B.c #17	ENSGT00950000182885.C.b.e ##17	ENSGT00390000010777.i #21	ENSGT00390000006088.j #20	ENSGT00940000168896.c	ENSGT00940000159081.s.b.a.b #18	ENSGT00390000014084.f #22	ENSGT01030000234578.B.a.h #23	ENSGT01030000234578.B.a.g.b #23	ENSGT00390000006747.o #24	ENSGT00950000183117.a.a.g #26	ENSGT00940000158254.e #27	ENSGT00940000155067.b.a.d.a ##28	ENSGT00940000155067.a.y #28	ENSGT00650000094663.a	ENSGT00390000002730.e.b.d	ENSGT00950000183113.b.b.c.b.l	ENSGT00940000160161.e.a.m.b.b	ENSGT00940000160161.e.a.m.b.a	ENSGT00940000159401.d.d.b	ENSGT00940000153414.A.e.b	ENSGT00940000157821.h.a.d
Rainbow trout	MODERN SPECIES	6	NTN4 (ENSOMYG00000005059)	ENSOMYG00000042368	tsn9 (ENSOMYG00000042359)	ENSOMYG00000040026	klhl42 (ENSOMYG00000039478)	ENSOMYG00000039459	ENSOMYG00000066274	itfg2 (ENSOMYG00000039401)	ENSOMYG00000051961	pah (ENSOMYG00000039070) #17	th2 (ENSOMYG00000038993) ##17	nup37 (ENSOMYG00000038812) #21	parpbp (ENSOMYG00000038733) #20	ENSOMYG00000038696	IGF1 (ENSOMYG00000038605) #18	washc3 (ENSOMYG00000038443) #22	ENSOMYG00000052568	dram1 (ENSOMYG00000038520) #23	gnptab (ENSOMYG00000037960) #24	chpt1 (ENSOMYG00000037683) #26	mybpc1 (ENSOMYG00000037520) #27	ENSOMYG00000037425 ##28	spic (ENSOMYG00000037414) #28	atp6v1e1b (ENSOMYG00000037393)	ENSOMYG00000037379	ENSOMYG00000065117	ENSOMYG00000037323	ENSOMYG00000050284	ENSOMYG00000037212	FGF6 (ENSOMYG00000051544)	ENSOMYG00000037173
Oncorhynchus_a	ANCESTRAL SPECIES	31	ENSGT00940000156615.a.e	ENSGT00940000154818.e.a.b	ENSGT00940000164757.a	ENSGT00390000008645.h.b	ENSGT00940000158225.i.a.c.a	ENSGT00940000154983.c.b.`b.a	ENSGT00940000160124.c	ENSGT00950000182999.b.a.a.n	ENSGT00940000166611.c	ENSGT00950000182885.B.c #17	ENSGT00950000182885.C.b.e ##17	ENSGT00390000010777.i #21	ENSGT00390000006088.j #20	ENSGT00940000168896.c	ENSGT00940000159081.s.b.a.b #18	ENSGT00390000014084.f #22	ENSGT01030000234578.B.a.h #23	ENSGT01030000234578.B.a.g.b #23	ENSGT00390000006747.o #24	ENSGT00950000183117.a.a.g #26	ENSGT00940000158254.e #27	ENSGT00940000155067.b.a.d.a ##28	ENSGT00940000155067.a.y #28	ENSGT00650000094663.a	ENSGT00390000002730.e.b.d	ENSGT00950000183113.b.b.c.b.l	ENSGT00940000160161.e.a.m.b.b	ENSGT00940000159401.d.d.b	ENSGT00940000153414.A.e.b	ENSGT00940000157821.h.a.d	ENSGT00940000160821.c.a
Chinook salmon	MODERN SPECIES	8	usp44 (ENSOTSG00005010279)	ntn4 (ENSOTSG00005010278)	ENSOTSG00005010277	ENSOTSG00005010276	tspan9b (ENSOTSG00005010275)	ELAPOR2 (ENSOTSG00005005653)	klhl42 (ENSOTSG00005005638)	nrip2 (ENSOTSG00005005637)	ascl1a (ENSOTSG00005005636)	pah (ENSOTSG00005005614) #17	th2 (ENSOTSG00005005358) ##17	nup37 (ENSOTSG00005005034) #21	parpbp (ENSOTSG00005005028) #20	ENSOTSG00005005025	igf1 (ENSOTSG00005004895) #18	washc3 (ENSOTSG00005004891) #22	dram1 (ENSOTSG00005004876) #23	gnptab (ENSOTSG00005004308) #24	chpt1 (ENSOTSG00005004253) #26	mybpc1 (ENSOTSG00005004130) #27	ENSOTSG00005004126 ##28	ENSOTSG00005004125	spic (ENSOTSG00005004124) #28	atp6v1e1b (ENSOTSG00005004117)	ENSOTSG00005004113	ENSOTSG00005004111	ENSOTSG00005004110	GALNT8 (ENSOTSG00005004107)	DYRK4 (ENSOTSG00005002455)	rad51ap1 (ENSOTSG00005002447)	fgf6b (ENSOTSG00005002443)
Coho salmon	MODERN SPECIES	10	metap2b (ENSOKIG00005044856)	USP44 (ENSOKIG00005044906)	ntn4 (ENSOKIG00005044958)	SNRPF (ENSOKIG00005044976)	TSPAN9 (ENSOKIG00005044982)	ELAPOR2 (ENSOKIG00005045125)	klhl42 (ENSOKIG00005046905)	nrip2 (ENSOKIG00005046907)	ascl1a (ENSOKIG00005046911)	pah (ENSOKIG00005046957) #17	th2 (ENSOKIG00005047286) ##17	nup37 (ENSOKIG00005047492) #21	parpbp (ENSOKIG00005047532) #20	ENSOKIG00005047543	IGF1 (ENSOKIG00005047564) #18	washc3 (ENSOKIG00005047599) #22	dram1 (ENSOKIG00005047623) #23	dram1 (ENSOKIG00005047637) #23	gnptab (ENSOKIG00005047672) #24	chpt1 (ENSOKIG00005047866) #26	mybpc1 (ENSOKIG00005047917) #27	ENSOKIG00005048072 ##28	spic (ENSOKIG00005048078) #28	ENSOKIG00005048080	ENSOKIG00005048086	ENSOKIG00005048100	ENSOKIG00005048103	GALNT8 (ENSOKIG00005048110)	DYRK4 (ENSOKIG00005005894)	rad51ap1 (ENSOKIG00005006131)	fgf6b (ENSOKIG00005006159)
Northern pike	MODERN SPECIES	22	ENSELUG00000026262	snrpf (ENSELUG00000003121)	amdhd1 (ENSELUG00000001354)	tspan9b (ENSELUG00000003152)	elapor2b (ENSELUG00000003204)	klhl42 (ENSELUG00000003220)	nrip2 (ENSELUG00000003231)	itfg2 (ENSELUG00000003251)	ascl1a (ENSELUG00000003258)	pah (ENSELUG00000003301) #17	th2 (ENSELUG00000003327) ##17	nup37 (ENSELUG00000003359) #21	parpbp (ENSELUG00000003382) #20	ENSELUG00000003396	igf1 (ENSELUG00000003410) #18	washc3 (ENSELUG00000001180) #22	dram1 (ENSELUG00000003450) #23	gnptab (ENSELUG00000003506) #24	chpt1 (ENSELUG00000003556) #26	mybpc1 (ENSELUG00000003611) #27	ENSELUG00000003623 ##28	spic (ENSELUG00000003655) #28	atp6v1e1b (ENSELUG00000003707)	ADA2 (ENSELUG00000001244)	GALNT8 (ENSELUG00000003855)	DYRK4 (ENSELUG00000003899)	rad51ap1 (ENSELUG00000003944)	fgf6b (ENSELUG00000003959)	fgf23 (ENSELUG00000027201)	tigarb (ENSELUG00000003991)	ccnd2b (ENSELUG00000004013)
Otomorpha	ANCESTRAL SPECIES	258									ENSGT00940000159081 #18	ENSGT00390000004984.b #19	ENSGT00390000006088 #20	ENSGT00390000010777 #21	ENSGT00950000182885.C.b ##17	ENSGT00950000182885.B #17	ENSGT00940000166611	ENSGT00390000014084 #22	ENSGT01030000234578.B.a #23	ENSGT00390000006747 #24	ENSGT00950000183117.a.a #26	ENSGT00940000158254 #27	ENSGT00940000155067.b.a ##28	ENSGT00940000155067.a #28	ENSGT00940000156246.c.b	ENSGT01050000244882.b.d	ENSGT00390000003444	ENSGT00940000154738.a.r	ENSGT00940000155419.c.b	ENSGT00940000155915.b	ENSGT00950000183062.a.a.b.b.a	ENSGT00940000156242.c.b	ENSGT00390000013995.b.b.k.a
Clupeiformes	ANCESTRAL SPECIES	32	ENSGT01030000234550.a.a.d.a.b	ENSGT00940000166253.a	ENSGT00390000018424	ENSGT00390000002796	ENSGT00940000157659	ENSGT00940000158094	ENSGT00940000154318.A.a	ENSGT00940000157502	ENSGT00440000039984.b	ENSGT00940000158420	ENSGT00940000159226	ENSGT00390000007725.A.a	ENSGT00940000155840.B	ENSGT00940000155083.b.b	ENSGT00940000156000	ENSGT00390000014084 #22	ENSGT01030000234578.B.a #23	ENSGT00390000006747 #24	ENSGT00950000183117.a.a #26	ENSGT00940000158254 #27	ENSGT00940000155067.b.a ##28	ENSGT00940000155067.a #28	ENSGT00940000156246.c.b	ENSGT00940000164630	ENSGT01050000244882.b.d	ENSGT00390000003444	ENSGT00940000154738.a.r	ENSGT00940000155419.c.b	ENSGT00940000155915.b	ENSGT00950000183062.a.a.b.b.a	ENSGT00940000156242.c.b
Atlantic herring	MODERN SPECIES	7	zgc:162331 (ENSCHAG00000009948)	ENSCHAG00000009993	ssbp1 (ENSCHAG00000010015)	creb3l2 (ENSCHAG00000010107)	ENSCHAG00000010441	ENSCHAG00000011733	RASSF3 (ENSCHAG00000011742)	zgc:194209 (ENSCHAG00000011759)	zgc:194209 (ENSCHAG00000011799)	gnsa (ENSCHAG00000011850)	TBC1D30 (ENSCHAG00000012677)	ntf3 (ENSCHAG00000012920)	ano2b (ENSCHAG00000012927)	cd9b (ENSCHAG00000013021)	itfg2 (ENSCHAG00000013047)	washc3 (ENSCHAG00000013215) #22	dram1 (ENSCHAG00000013293) #23	itfg2 (ENSCHAG00000013298)	nrip2 (ENSCHAG00000013336)	klhl42 (ENSCHAG00000013350)	UPF2 (ENSCHAG00000013366)	ENSCHAG00000013462	ECHDC3 (ENSCHAG00000013465)	usp6nl (ENSCHAG00000013488)	celf2 (ENSCHAG00000013909)	ENSCHAG00000014500	gata3 (ENSCHAG00000014525)	taf3 (ENSCHAG00000014551)	atp5f1c (ENSCHAG00000014596)	kin (ENSCHAG00000014703)	itih2 (ENSCHAG00000014784)
Denticle herring	MODERN SPECIES	6	slc13a4 (ENSDCDG00000022887)	zgc:162331 (ENSDCDG00000022894)	ENSDCDG00000022895	ssbp1 (ENSDCDG00000022896)	creb3l2 (ENSDCDG00000022900)	DGKI (ENSDCDG00000023066)	ENSDCDG00000027431	RASSF3 (ENSDCDG00000027433)	zgc:194209 (ENSDCDG00000027436)	gnsa (ENSDCDG00000027447)	TBC1D30 (ENSDCDG00000027959)	ntf3 (ENSDCDG00000027963)	ano2b (ENSDCDG00000027991)	cd9b (ENSDCDG00000029064)	cwf19l1 (ENSDCDG00000029070)	washc3 (ENSDCDG00000029081) #22	dram1 (ENSDCDG00000029082) #23	ENSDCDG00000029084	gnptab (ENSDCDG00000029089) #24	chpt1 (ENSDCDG00000029097) #26	mybpc1 (ENSDCDG00000029140) #27	ENSDCDG00000029193 ##28	spic (ENSDCDG00000029194) #28	dnajb9b (ENSDCDG00000029195)	ENSDCDG00000029196	PNPLA8 (ENSDCDG00000029201)	nrcama (ENSDCDG00000029488)	cntn1b (ENSDCDG00000034463)	pdzrn4 (ENSDCDG00000034914)	gxylt1b (ENSDCDG00000034917)	yaf2 (ENSDCDG00000034919)
Otophysi	ANCESTRAL SPECIES	162				ENSGT00940000159081 #18	ENSGT00390000004984.b #19	ENSGT00390000006088 #20	ENSGT00390000010777 #21	ENSGT00950000182885.C.b ##17	ENSGT00950000182885.B #17	ENSGT00940000166611	ENSGT00940000157013	ENSGT00390000005378	ENSGT00950000182999.b.a.a	ENSGT00940000160124	ENSGT00940000156000	ENSGT00390000014084 #22	ENSGT01030000234578.B.a #23	ENSGT00390000006747 #24	ENSGT00950000183117.a.a #26	ENSGT00940000158254 #27	ENSGT00940000155067.b.a ##28	ENSGT00940000155067.a #28	ENSGT00940000156246.c.b	ENSGT00940000164630	ENSGT01050000244882.b.d	ENSGT00940000157710	ENSGT00940000154572	ENSGT00600000084428.b	ENSGT01020000230394.e.a.a.b.a.a.b.a.b.b	ENSGT01050000244850.A.a.o.b	ENSGT00390000014448
Characiphysae	ANCESTRAL SPECIES	63	ENSGT00390000018003.b	ENSGT00390000008702	ENSGT00390000014557	ENSGT00940000156608	ENSGT00940000155441	ENSGT00940000155210.a.b	ENSGT00940000158677	ENSGT00940000153678.a.a	ENSGT00390000006485.c.sc	ENSGT00940000153438.b	ENSGT00950000182952.C.h	ENSGT00390000005378	ENSGT00950000182999.b.a.a	ENSGT00940000160124	ENSGT00940000156000	ENSGT00390000014084 #22	ENSGT01030000234578.B.a #23	ENSGT00390000006747 #24	ENSGT00950000183117.a.a #26	ENSGT00940000158254 #27	ENSGT00940000155067.b.a ##28	ENSGT00940000155067.a #28	ENSGT00940000156246.c.b	ENSGT00940000164630	ENSGT01050000244882.b.d	ENSGT00940000157710	ENSGT00940000154572	ENSGT00600000084428.b	ENSGT01020000230394.e.a.a.b.a.a.b.a.b.b	ENSGT00390000014448	ENSGT00940000157983
Channel catfish	MODERN SPECIES	5	med21 (ENSIPUG00000016119)	pmpcb (ENSIPUG00000016136)	dnajc2 (ENSIPUG00000016177)	nudt4b (ENSIPUG00000016210)	pkp2 (ENSIPUG00000016227)	dennd5b (ENSIPUG00000016271)	FAM60A (ENSIPUG00000016490)	caprin2 (ENSIPUG00000016517)	btg1 (ENSIPUG00000016587)	ENSIPUG00000016632	cat (ENSIPUG00000016679)	itfg2 (ENSIPUG00000016788)	nrip2 (ENSIPUG00000016853)	klhl42 (ENSIPUG00000016864)	cwf19l1 (ENSIPUG00000016884)	washc3 (ENSIPUG00000016914) #22	dram1 (ENSIPUG00000016933) #23	gnptab (ENSIPUG00000016963) #24	chpt1 (ENSIPUG00000017031) #26	mybpc1 (ENSIPUG00000017099) #27	ENSIPUG00000017572 ##28	SPIC (ENSIPUG00000017583) #28	dnajb9b (ENSIPUG00000017594)	apaf1 (ENSIPUG00000017605)	anks1b (ENSIPUG00000017697)	ENSIPUG00000017802	uhrf1bp1l (ENSIPUG00000017811)	ptpn12 (ENSIPUG00000017852)	gsap (ENSIPUG00000017912)	ccdc146 (ENSIPUG00000017962)	fgl2a (ENSIPUG00000017981)
Characiphysae_b	ANCESTRAL SPECIES	31	ENSGT00390000018003.b	ENSGT00390000008702	ENSGT00390000014557	ENSGT00940000156608	ENSGT00940000155441	ENSGT00940000155210.a.b	ENSGT00940000158677	ENSGT00940000153678.a.a	ENSGT00390000006485.c.sc	ENSGT00940000153438.b	ENSGT00950000182952.C.h	ENSGT00390000005378	ENSGT00950000182999.b.a.a	ENSGT00940000160124	ENSGT00940000156000	ENSGT00390000014084 #22	ENSGT01030000234578.B.a #23	ENSGT00390000006747 #24	ENSGT00950000183117.a.a #26	ENSGT00940000158254 #27	ENSGT00940000155067.b.a ##28	ENSGT00940000155067.a #28	ENSGT00940000156246.c.b	ENSGT00940000164630	ENSGT01050000244882.b.d	ENSGT00940000157710	ENSGT00940000154572	ENSGT00600000084428.b	ENSGT01020000230394.e.a.a.b.a.a.b.a.b.b	ENSGT00390000014448	ENSGT00940000157983
Characoidei	ANCESTRAL SPECIES	80	ENSGT00390000018003.b	ENSGT00390000008702	ENSGT00390000014557	ENSGT00940000156608	ENSGT00940000155441	ENSGT00940000155210.a.b	ENSGT00940000158677	ENSGT00940000153678.a.a	ENSGT00390000006485.c.sc	ENSGT00940000153438.b	ENSGT00950000182952.C.h	ENSGT00390000005378	ENSGT00950000182999.b.a.a	ENSGT00940000160124	ENSGT00940000156000	ENSGT00390000014084 #22	ENSGT01030000234578.B.a #23	ENSGT00390000006747 #24	ENSGT00950000183117.a.a #26	ENSGT00940000158254 #27	ENSGT00940000155067.b.a ##28	ENSGT00940000155067.a #28	ENSGT00940000156246.c.b	ENSGT00940000157710	ENSGT00940000154572	ENSGT00600000084428.b	ENSGT01020000230394.e.a.a.b.a.a.b.a.b.b	ENSGT00390000014448	ENSGT00940000157983	ENSGT00390000014443	ENSGT00390000004323.a
Red-bellied piranha	MODERN SPECIES	272	fgfr1op2 (ENSPNAG00000017156)	TM7SF3 (ENSPNAG00000017172)	med21 (ENSPNAG00000017182)	pmpcb (ENSPNAG00000017229)	dnajc2 (ENSPNAG00000017305)	nudt4b (ENSPNAG00000017347)	pkp2 (ENSPNAG00000017362)	dennd5b (ENSPNAG00000017640)	sinhcaf (ENSPNAG00000017661)	caprin2 (ENSPNAG00000017781)	btg1 (ENSPNAG00000004956)	itfg2 (ENSPNAG00000017847)	nrip2 (ENSPNAG00000017860)	klhl42 (ENSPNAG00000017881)	cwf19l1 (ENSPNAG00000017936)	washc3 (ENSPNAG00000017945) #22	dram1 (ENSPNAG00000017955) #23	gnptab (ENSPNAG00000018089) #24	chpt1 (ENSPNAG00000018121) #26	mybpc1 (ENSPNAG00000018204) #27	ENSPNAG00000018216 ##28	spic (ENSPNAG00000018232) #28	dnajb9b (ENSPNAG00000018247)	apaf1 (ENSPNAG00000018274)	anks1b (ENSPNAG00000018412)	uhrf1bp1l (ENSPNAG00000018473)	ENSPNAG00000018516
Mexicana tetra	MODERN SPECIES	22	fgfr1op2 (ENSAMXG00000039243)	TM7SF3 (ENSAMXG00000042075)	med21 (ENSAMXG00000037449)	pmpcb (ENSAMXG00000007214)	dnajc2 (ENSAMXG00000007216)	nudt4b (ENSAMXG00000040513)	pkp2 (ENSAMXG00000007234)	dennd5b (ENSAMXG00000007247)	sinhcaf (ENSAMXG00000041503)	caprin2 (ENSAMXG00000007266)	btg1 (ENSAMXG00000042550)	itfg2 (ENSAMXG00000042592)	nrip2 (ENSAMXG00000035836)	klhl42 (ENSAMXG00000040776)	cwf19l1 (ENSAMXG00000007302)	washc3 (ENSAMXG00000007318) #22	dram1 (ENSAMXG00000031247) #23	gnptab (ENSAMXG00000007331) #24	chpt1 (ENSAMXG00000030966) #26	mybpc1 (ENSAMXG00000037531) #27	spic (ENSAMXG00000015800) #28	ENSAMXG00000033995 ##28	dnajb9b (ENSAMXG00000041402)	apaf1 (ENSAMXG00000015838)	ENSAMXG00000036523	anks1b (ENSAMXG00000015871)	ENSAMXG00000038317	uhrf1bp1l (ENSAMXG00000015887)	ENSAMXG00000032778	cradd (ENSAMXG00000030107)	socs2 (ENSAMXG00000015948)
Electric eel	MODERN SPECIES	610								sinhcaf (ENSEEEG00000018541)	ENSEEEG00000018539	btg1 (ENSEEEG00000018537)	ENSEEEG00000018534	itfg2 (ENSEEEG00000018530)	nrip2 (ENSEEEG00000018529)	klhl42 (ENSEEEG00000018526)	cwf19l1 (ENSEEEG00000018510)	washc3 (ENSEEEG00000018505) #22	dram1 (ENSEEEG00000018502) #23	gnptab (ENSEEEG00000018468) #24	chpt1 (ENSEEEG00000018395) #26	mybpc1 (ENSEEEG00000017760) #27	ENSEEEG00000017735 ##28	spic (ENSEEEG00000017733) #28	dnajb9b (ENSEEEG00000017729)	ENSEEEG00000017731	avpr2l (ENSEEEG00000017728)	ENSEEEG00000017726
Cyprinoidei	ANCESTRAL SPECIES	28	ENSGT00530000063722.a	ENSGT00390000009532.A.d.a	ENSGT00940000165254.c.b	ENSGT00940000159081 #18	ENSGT00390000004984.b #19	ENSGT00390000006088 #20	ENSGT00390000010777 #21	ENSGT00950000182885.C.b ##17	ENSGT00950000182885.B.e #17	ENSGT00940000166611	ENSGT00940000157013	ENSGT00390000005378	ENSGT00950000182999.b.a.a	ENSGT00940000160124	ENSGT00940000156000	ENSGT00390000014084 #22	ENSGT01030000234578.B.a #23	ENSGT00390000006747 #24	ENSGT00950000183117.a.a #26	ENSGT00940000158254 #27	ENSGT00940000155067.b.a ##28	ENSGT00940000155067.a #28	ENSGT00940000156246.c.b	ENSGT01050000244882.b.d	ENSGT00940000157710	ENSGT00940000154572	ENSGT00600000084428.b	ENSGT01020000230394.e.a.a.b.a.a.b.a.b.b	ENSGT01050000244850.A.a.o.b	ENSGT00390000014448	ENSGT00940000157983
Cyprininae	DUPLICATION
Cyprininae	ANCESTRAL SPECIES	2	ENSGT00390000004708.j	ENSGT00530000063722.a.db.a	ENSGT00390000009532.A.d.a.d	ENSGT00940000159081.i.b #18	ENSGT00390000004984.b #19	ENSGT00390000006088.f #20	ENSGT00390000010777.c #21	ENSGT00950000182885.C.b.a ##17	ENSGT00950000182885.B.e #17	ENSGT00940000166611.a	ENSGT00940000157013.n	ENSGT00390000005378	ENSGT00950000182999.b.a.a.i	ENSGT00940000160124	ENSGT00940000156000.b	ENSGT00390000014084.g #22	ENSGT01030000234578.B.a.a #23	ENSGT00390000006747.n #24	ENSGT00950000183117.a.a.i #26	ENSGT00940000158254.c #27	ENSGT00940000155067.b.a.a ##28	ENSGT00940000155067.a.u #28	ENSGT00940000156246.c.b.b	ENSGT01050000244882.b.d.a	ENSGT00940000157710.e
Goldfish	MODERN SPECIES	33	braf (ENSCARG00000001189)	si:dkey-222f8.3 (ENSCARG00000001106)	tnnt2c (ENSCARG00000001100)	cry1a (ENSCARG00000001071)	igf1 (ENSCARG00000001038) #18	pmch (ENSCARG00000001019) #19	parpbp (ENSCARG00000001013) #20	nup37 (ENSCARG00000000985) #21	th2 (ENSCARG00000000577) ##17	ascl1a (ENSCARG00000000469)	recql (ENSCARG00000000390)	itfg2 (ENSCARG00000000309)	nrip2 (ENSCARG00000000236)	klhl42 (ENSCARG00000000223)	cwf19l1 (ENSCARG00000000190)	washc3 (ENSCARG00000000151) #22	dram1 (ENSCARG00000000136) #23	chpt1 (ENSCARG00000028495) #26	mybpc1 (ENSCARG00000025692) #27	gnptab (ENSCARG00000025313) #24	ENSCARG00000025248 ##28	spic (ENSCARG00000025215) #28	dnajb9b (ENSCARG00000025200)	avpr2l (ENSCARG00000025186)	apaf1 (ENSCARG00000023824)	anks1b (ENSCARG00000023508)	ENSCARG00000023480	ENSCARG00000023471	ENSCARG00000023463	ENSCARG00000023449	lamtor4 (ENSCARG00000023435)
Cyprininae_a	ANCESTRAL SPECIES	196	ENSGT00390000004708.i	ENSGT00530000063722.a.db.b	ENSGT00390000009532.A.d.a.c	ENSGT00940000159081.i.a #18	ENSGT00390000004984.b #19	ENSGT00390000006088.e #20	ENSGT00390000010777.d #21	ENSGT00950000182885.C.b.b ##17	ENSGT00950000182885.B.e.b #17	ENSGT00940000166611.b	ENSGT00940000157013.m	ENSGT00940000175478	ENSGT00950000182999.b.a.a.j	ENSGT00940000160124	ENSGT00940000156000.b	ENSGT00390000014084.g #22	ENSGT01030000234578.B.a.a #23	ENSGT00390000006747.n #24	ENSGT00950000183117.a.a.i #26	ENSGT00940000158254.c #27	ENSGT00940000155067.b.a.a ##28	ENSGT00940000155067.a.u #28	ENSGT00940000156246.c.b.b	ENSGT01050000244882.b.d.a	ENSGT00940000157710.e
Golden-line barbel	MODERN SPECIES	7	ENSSGRG00000037345	bcat1 (ENSSGRG00000037349)	igf1 (ENSSGRG00000037715) #18	ENSSGRG00000037716	pmch (ENSSGRG00000037717) #19	parpbp (ENSSGRG00000037718) #20	nup37 (ENSSGRG00000037720) #21	th2 (ENSSGRG00000037724) ##17	pah (ENSSGRG00000037725) #17	ascl1a (ENSSGRG00000037726)	recql (ENSSGRG00000037728)	itfg2 (ENSSGRG00000037761)	nrip2 (ENSSGRG00000037763)	klhl42 (ENSSGRG00000037765)	cwf19l1 (ENSSGRG00000037766)	washc3 (ENSSGRG00000037799) #22	dram1 (ENSSGRG00000037800) #23	gnptab (ENSSGRG00000037804) #24	chpt1 (ENSSGRG00000037889) #26	mybpc1 (ENSSGRG00000037925) #27	ENSSGRG00000038439 ##28	spic (ENSSGRG00000038440) #28	dnajb9b (ENSSGRG00000038441)	avpr2l (ENSSGRG00000038442)	anks1b (ENSSGRG00000038446)	uhrf1bp1l (ENSSGRG00000038491)	cradd (ENSSGRG00000038500)	socs2 (ENSSGRG00000038501)	ncaph2 (ENSSGRG00000038502)	sco2 (ENSSGRG00000038505)	ENSSGRG00000038508
Common carp reference	MODERN SPECIES	8	sox5 (ENSCCRG00000051929)	lrmp (ENSCCRG00000000772)	bcat1 (ENSCCRG00000000792)	igf1 (ENSCCRG00000081178) #18	ENSCCRG00000000840	parpbp (ENSCCRG00000000844) #20	nup37 (ENSCCRG00000000856) #21	th2 (ENSCCRG00000000872) ##17	pah (ENSCCRG00000069781) #17	ascl1a (ENSCCRG00000066242)	recql (ENSCCRG00000082435)	itfg2 (ENSCCRG00000031745)	nrip2 (ENSCCRG00000080548)	klhl42 (ENSCCRG00000072652)	cwf19l1 (ENSCCRG00000072222)	washc3 (ENSCCRG00000057924) #22	dram1 (ENSCCRG00000031656) #23	gnptab (ENSCCRG00000081071) #24	chpt1 (ENSCCRG00000065425) #26	mybpc1 (ENSCCRG00000042444) #27	ENSCCRG00000043300 ##28	spic (ENSCCRG00000043304) #28	dnajb9b (ENSCCRG00000075779)	avpr2l (ENSCCRG00000009813)	apaf1 (ENSCCRG00000080886)	anks1b (ENSCCRG00000072266)	uhrf1bp1l (ENSCCRG00000001016)	ENSCCRG00000073704	cradd (ENSCCRG00000043779)	socs2 (ENSCCRG00000075325)	ncaph2 (ENSCCRG00000020929)
Cyprininae	ANCESTRAL SPECIES	44	ENSGT00950000182939.b.a.b.c	ENSGT00940000156122.k	ENSGT00390000004708.i	ENSGT00530000063722.a.db.b	ENSGT00390000009532.A.d.a.c	ENSGT00940000159081.i.a #18	ENSGT01060000250294.a.a	ENSGT00390000006088.e #20	ENSGT00390000010777.d #21	ENSGT00950000182885.C.b.b ##17	ENSGT00940000166611.b	ENSGT00940000157013.m	ENSGT00940000175478	ENSGT00950000182999.b.a.a.j	ENSGT00940000156000.a	ENSGT00390000014084.h #22	ENSGT01030000234578.B.a.b #23	ENSGT00390000006747.m #24	ENSGT00950000183117.a.a.j #26	ENSGT00940000158254.d #27	ENSGT00940000155067.b.a.b ##28	ENSGT00940000155067.a.v #28	ENSGT00940000156246.c.b.a	ENSGT01050000244882.b.d.b	ENSGT00940000157710.f	ENSGT00940000154572.e.a	ENSGT00600000084428.b.h	ENSGT01020000230394.e.a.a.b.a.a.b.a.b.b	ENSGT01050000244850.A.a.o.b	ENSGT00390000014448	ENSGT00940000157983.t
Goldfish	MODERN SPECIES	21	pkp2 (ENSCARG00000050212)	dennd5b (ENSCARG00000049058)	sinhcaf (ENSCARG00000048888)	caprin2 (ENSCARG00000048732)	btg1 (ENSCARG00000048709)	ENSCARG00000047724	nrcama (ENSCARG00000036973)	pdzrn4 (ENSCARG00000036532)	yaf2 (ENSCARG00000036520)	pah (ENSCARG00000036518) #17	ascl1a (ENSCARG00000036515)	recql (ENSCARG00000035666)	itfg2 (ENSCARG00000035504)	nrip2 (ENSCARG00000035479)	cwf19l1 (ENSCARG00000035086)	washc3 (ENSCARG00000035026) #22	dram1 (ENSCARG00000035003) #23	chpt1 (ENSCARG00000034926) #26	gnptab (ENSCARG00000034674) #24	mybpc1 (ENSCARG00000030596) #27	spic (ENSCARG00000030425) #28	dnajb9b (ENSCARG00000030416)	avpr2l (ENSCARG00000030407)	anks1b (ENSCARG00000026817)	uhrf1bp1l (ENSCARG00000026618)	ENSCARG00000026605	ENSCARG00000026595	cradd (ENSCARG00000026584)	socs2 (ENSCARG00000026577)	ncaph2 (ENSCARG00000026558)	ENSCARG00000026500
Cyprininae_a	ANCESTRAL SPECIES	223															ENSGT00940000156000.a	ENSGT00390000014084.h #22	ENSGT01030000234578.B.a.b #23	ENSGT00390000006747.m #24	ENSGT00950000183117.a.a.j #26	ENSGT00940000158254.d #27	ENSGT00940000155067.b.a.b ##28	ENSGT00940000155067.a.v #28	ENSGT00940000156246.c.b.a	ENSGT01050000244882.b.d.b	ENSGT00940000157710.f	ENSGT00940000154572.e.a	ENSGT00600000084428.b.h	ENSGT01020000230394.e.a.a.b.a.a.b.a.b.b	ENSGT00390000014448.k	ENSGT00940000157983.t	ENSGT01020000230616
Common carp reference	MODERN SPECIES	36	sox5 (ENSCCRG00000082080)	dnai7 (ENSCCRG00000000491)	lrmp (ENSCCRG00000000514)	bcat1 (ENSCCRG00000074959)	igf1 (ENSCCRG00000073680) #18	ENSCCRG00000000884	parpbp (ENSCCRG00000000885) #20	nup37 (ENSCCRG00000000895) #21	th2 (ENSCCRG00000000913) ##17	pah (ENSCCRG00000054856) #17	ascl1a (ENSCCRG00000080722)	recql (ENSCCRG00000066796)	ENSCCRG00000000988	nrip2 (ENSCCRG00000069607)	cwf19l1 (ENSCCRG00000059030)	washc3 (ENSCCRG00000038910) #22	dram1 (ENSCCRG00000038915) #23	chpt1 (ENSCCRG00000039523) #26	mybpc1 (ENSCCRG00000040183) #27	ENSCCRG00000042420 ##28	spic (ENSCCRG00000042424) #28	GNPTAB (ENSCCRG00000038935) #24	dnajb9b (ENSCCRG00000075532)	avpr2l (ENSCCRG00000031437)	apaf1 (ENSCCRG00000012510)	anks1b (ENSCCRG00000058152)	uhrf1bp1l (ENSCCRG00000051878)	ENSCCRG00000068849	ENSCCRG00000072762	cradd (ENSCCRG00000079735)	socs2 (ENSCCRG00000020927)
Golden-line barbel	MODERN SPECIES		strap (ENSSGRG00000023756)	ETNK1 (ENSSGRG00000024131)	sox5 (ENSSGRG00000024151)	lrmp (ENSSGRG00000025462)	bcat1 (ENSSGRG00000025467)	igf1 (ENSSGRG00000025468) #18	pmch (ENSSGRG00000025533) #19	parpbp (ENSSGRG00000025535) #20	nup37 (ENSSGRG00000025536) #21	th2 (ENSSGRG00000025558) ##17	ascl1a (ENSSGRG00000026619)	recql (ENSSGRG00000026620)	nrip2 (ENSSGRG00000026655)	klhl42 (ENSSGRG00000026656)	cwf19l1 (ENSSGRG00000026657)	washc3 (ENSSGRG00000026674) #22	dram1 (ENSSGRG00000026676) #23	ENSSGRG00000026679 #24	mybpc1 (ENSSGRG00000026685) #27	ENSSGRG00000027218 ##28	spic (ENSSGRG00000027220) #28	dnajb9b (ENSSGRG00000027222)	avpr2l (ENSSGRG00000027223)	apaf1 (ENSSGRG00000027225)	ENSSGRG00000027228	ENSSGRG00000027231	ENSSGRG00000027232	ENSSGRG00000027233	ENSSGRG00000027238	uhrf1bp1l (ENSSGRG00000027242)	ENSSGRG00000027264
Zebrafish	MODERN SPECIES	19	lrmp (ENSDARG00000045574)	bcat1 (ENSDARG00000045568)	igf1 (ENSDARG00000094132) #18	nup37 (ENSDARG00000094191) #21	pmch (ENSDARG00000073959) #19	parpbp (ENSDARG00000029944) #20	th2 (ENSDARG00000038384) ##17	pah (ENSDARG00000020143) #17	ascl1a (ENSDARG00000038386)	recql (ENSDARG00000007175)	itfg2 (ENSDARG00000002174)	nrip2 (ENSDARG00000079985)	klhl42 (ENSDARG00000006011)	cwf19l1 (ENSDARG00000002128)	ENSDARG00000115392	washc3 (ENSDARG00000045563) #22	dram1 (ENSDARG00000045561) #23	gnptab (ENSDARG00000030153) #24	chpt1 (ENSDARG00000014572) #26	mybpc1 (ENSDARG00000045560) #27	ENSDARG00000087438 ##28	spic (ENSDARG00000012435) #28	dnajb9b (ENSDARG00000016886)	avpr2l (ENSDARG00000076690)	apaf1 (ENSDARG00000021239)	anks1b (ENSDARG00000003512)	uhrf1bp1l (ENSDARG00000004055)	PLXNC1 (ENSDARG00000015278)	cradd (ENSDARG00000028192)	socs2 (ENSDARG00000045557)	ncaph2 (ENSDARG00000033757)
Osteoglossiformes	ANCESTRAL SPECIES	123																ENSGT00390000014084 #22	ENSGT01030000234578.B.a #23	ENSGT00390000006747 #24	ENSGT00390000000062 #25	ENSGT00950000183117.a.a.a #26	ENSGT00940000158254 #27	ENSGT00940000155067.a #28	ENSGT00940000155118 #29	ENSGT00390000016813 #30	ENSGT00940000155166.A #31	ENSGT00940000158553.b.a	ENSGT00390000001810.b	ENSGT00390000004708	ENSGT00530000063722.a	ENSGT00390000009532.A.d.a	ENSGT00940000156122
Asian bonytongue	MODERN SPECIES	11	anks1b (ENSSFOG00015000686)	apaf1 (ENSSFOG00015000841)	ENSSFOG00015000863	tcp11l2 (ENSSFOG00015000867)	actr6 (ENSSFOG00015000878)	ENSSFOG00015000921	scyl2 (ENSSFOG00015000976) #37	si:ch211-244b2.4 (ENSSFOG00015001068)	ascl1a (ENSSFOG00015027323)	pah (ENSSFOG00015001109) #17	th2 (ENSSFOG00015001175) ##17	nup37 (ENSSFOG00015001235) #21	parpbp (ENSSFOG00015001286) #20	ENSSFOG00015001300	igf1 (ENSSFOG00015001317) #18	washc3 (ENSSFOG00015025745) #22	dram1 (ENSSFOG00015033198) #23	gnptab (ENSSFOG00015001407) #24	sycp3 (ENSSFOG00015001502) #25	chpt1 (ENSSFOG00015001512) #26	mybpc1 (ENSSFOG00015001575) #27	spic (ENSSFOG00015001658) #28	arl1 (ENSSFOG00015001665) #29	UTP20 (ENSSFOG00015001674) #30	SLC5A8 (ENSSFOG00015001911) #31	ENSSFOG00015001915	lyrm5a (ENSSFOG00015033245)	dnai7 (ENSSFOG00015001961)	lrmp (ENSSFOG00015029538)	bcat1 (ENSSFOG00015002168)	sox5 (ENSSFOG00015002223)
P. kingsleyae	MODERN SPECIES	158	uhrf1bp1l (ENSPKIG00000005505)	anks1b (ENSPKIG00000005619)	ENSPKIG00000005743	apaf1 (ENSPKIG00000005791)	ENSPKIG00000005922	tcp11l2 (ENSPKIG00000005943)	actr6 (ENSPKIG00000005971)	ENSPKIG00000005995	scyl2 (ENSPKIG00000006047) #37	ascl1a (ENSPKIG00000006153)	pah (ENSPKIG00000006179) #17	th2 (ENSPKIG00000006229) ##17	nup37 (ENSPKIG00000006278) #21	parpbp (ENSPKIG00000006315) #20	igf1 (ENSPKIG00000006362) #18	washc3 (ENSPKIG00000006403) #22	dram1 (ENSPKIG00000006429) #23	gnptab (ENSPKIG00000006461) #24	chpt1 (ENSPKIG00000006521) #26	mybpc1 (ENSPKIG00000006680) #27	spic (ENSPKIG00000007092) #28	arl1 (ENSPKIG00000007118) #29	UTP20 (ENSPKIG00000007196) #30	SLC5A8 (ENSPKIG00000007438) #31	ENSPKIG00000007476	lyrm5a (ENSPKIG00000007509)	dnai7 (ENSPKIG00000007520)	IRAG2 (ENSPKIG00000007570)	bcat1 (ENSPKIG00000007588)	sox5 (ENSPKIG00000007620)	ETNK1 (ENSPKIG00000007666)
Spotted gar	MODERN SPECIES	674	GAS2L3 (ENSLOCG00000015204) #34	ANO4 (ENSLOCG00000015202) #32	SLC5A8 (ENSLOCG00000015201) #31	UTP20 (ENSLOCG00000015197) #30	arl1 (ENSLOCG00000015195) #29	spic (ENSLOCG00000015193) #28	ENSLOCG00000017893 ##28	mybpc1 (ENSLOCG00000015188) #27	chpt1 (ENSLOCG00000015186) #26	gnptab (ENSLOCG00000015184) #24	dram1 (ENSLOCG00000015183) #23	igf1 (ENSLOCG00000015180) #18	pmch (ENSLOCG00000015178) #19	parpbp (ENSLOCG00000015177) #20	nup37 (ENSLOCG00000015176) #21	washc3 (ENSLOCG00000015173) #22	pah (ENSLOCG00000015172) #17	si:ch211-244b2.4 (ENSLOCG00000015170)	scyl2 (ENSLOCG00000015168) #37	DEPDC4 (ENSLOCG00000015166)	actr6 (ENSLOCG00000015163)	tcp11l2 (ENSLOCG00000015162)	ENSLOCG00000015160	apaf1 (ENSLOCG00000015153)	anks1b (ENSLOCG00000015145)	uhrf1bp1l (ENSLOCG00000015138)	CKAP4 (ENSLOCG00000015137)	ENSLOCG00000017892	IKBIP (ENSLOCG00000015136)	arfgap3 (ENSLOCG00000015134)	pacsin2 (ENSLOCG00000015131)
Reedfish	MODERN SPECIES		ENSECRG00000005984	apaf1 (ENSECRG00000005928)	tcp11l2 (ENSECRG00000005889)	actr6 (ENSECRG00000005878)	DEPDC4 (ENSECRG00000005867)	scyl2 (ENSECRG00000005840) #37	ENSECRG00000005812	ENSECRG00000005794	ASCL1 (ENSECRG00000005766) #16	pah (ENSECRG00000005757) #17	th2 (ENSECRG00000005740) ##17	igf1 (ENSECRG00000005729) #18	pmch (ENSECRG00000005723) #19	parpbp (ENSECRG00000005713) #20	nup37 (ENSECRG00000005703) #21	washc3 (ENSECRG00000005692) #22	dram1 (ENSECRG00000005683) #23	gnptab (ENSECRG00000005649) #24	chpt1 (ENSECRG00000005630) #26	mybpc1 (ENSECRG00000005173) #27	spic (ENSECRG00000005061) #28	arl1 (ENSECRG00000005016) #29	UTP20 (ENSECRG00000004980) #30	ENSECRG00000004958	SLC5A8 (ENSECRG00000004938) #31	ANO4 (ENSECRG00000004910) #32	ENSECRG00000004896	GAS2L3 (ENSECRG00000004881) #34	nr1h4 (ENSECRG00000004858) #35	slc17a8 (ENSECRG00000004827) #36	fgfr1op2 (ENSECRG00000006300)
Elephant shark	MODERN SPECIES	1524	OSBPL8 (ENSCMIG00000010624)	zdhhc17 (ENSCMIG00000011045)	ENSCMIG00000011059	nav3 (ENSCMIG00000011099)	syt1a (ENSCMIG00000011214)	PAWR (ENSCMIG00000011235)	ppp1r12a (ENSCMIG00000011246)	DEPDC4 (ENSCMIG00000011260)	scyl2 (ENSCMIG00000011280) #37	ASCL1 (ENSCMIG00000011305) #16	pah (ENSCMIG00000011328) #17	th2 (ENSCMIG00000011400) ##17	IGF1 (ENSCMIG00000011437) #18	parpbp (ENSCMIG00000011442) #20	nup37 (ENSCMIG00000011451) #21	washc3 (ENSCMIG00000011463) #22	DRAM1 (ENSCMIG00000011465) #23	gnptab (ENSCMIG00000011481) #24	CHPT1 (ENSCMIG00000011518) #26	mybpc1 (ENSCMIG00000011645) #27	ENSCMIG00000012307 #28	arl1 (ENSCMIG00000012315) #29	ENSCMIG00000012322	stk38l (ENSCMIG00000012330)	med21 (ENSCMIG00000012361)	TM7SF3 (ENSCMIG00000012366)	fgfr1op2 (ENSCMIG00000012385)	slc17a8 (ENSCMIG00000012395) #36	nr1h4 (ENSCMIG00000012444) #35	GAS2L3 (ENSCMIG00000012498) #34	ANO4 (ENSCMIG00000012538) #32
Cyclostomata	ANCESTRAL SPECIES																	ENSGT00390000014084 #22
Lamprey	MODERN SPECIES	1432													ENSPMAG00000003965	pwp1 (ENSPMAG00000003969)	ENSPMAG00000003975	washc3 (ENSPMAG00000003976) #22
Ciona	ANCESTRAL SPECIES	61													ENSGT00940000166710.b	ENSGT00940000156166	ENSGT00390000012312	ENSGT00390000014084 #22	ENSGT00940000158244	ENSGT00390000004798	ENSGT00940000154352.A
Ciona savignyi	MODERN SPECIES	113	ENSCSAVG00000005197 #33	ENSCSAVG00000005250	ENSCSAVG00000005263	ENSCSAVG00000005267	ENSCSAVG00000005270	ENSCSAVG00000005276	ENSCSAVG00000005478	ENSCSAVG00000005489	ENSCSAVG00000005869	ENSCSAVG00000005873	ENSCSAVG00000005880	ENSCSAVG00000005899	ENSCSAVG00000005904	ENSCSAVG00000005909	ENSCSAVG00000005915	ENSCSAVG00000005922 #22	ENSCSAVG00000005932	ENSCSAVG00000005940	ENSCSAVG00000005968	ENSCSAVG00000005976	ENSCSAVG00000005985	ENSCSAVG00000005997	ENSCSAVG00000006002	ENSCSAVG00000006052	ENSCSAVG00000006079	ENSCSAVG00000006144	ENSCSAVG00000006151	ENSCSAVG00000006172	ENSCSAVG00000006280	ENSCSAVG00000006283	ENSCSAVG00000006287
Ciona intestinalis	MODERN SPECIES	6	ENSCING00000006703	ENSCING00000006702	ENSCING00000006699	ENSCING00000011345	ENSCING00000006698	ENSCING00000019120	ENSCING00000006696	ENSCING00000006692	ENSCING00000011344	ENSCING00000019868	ENSCING00000011343	ENSCING00000011342	ENSCING00000011341	ENSCING00000011340	ENSCING00000006800	ENSCING00000011339 #22	ENSCING00000006799	ENSCING00000006797	ENSCING00000011338	ENSCING00000011337	ENSCING00000006793	ENSCING00000011336	ENSCING00000024094	ENSCING00000006792	ENSCING00000016950	ENSCING00000024257	ENSCING00000011334	ENSCING00000006783	ENSCING00000006778	ENSCING00000011332	ENSCING00000006777