Glires	ANCESTRAL SPECIES	8	ENSGT00390000001301 #7	ENSGT00940000155719.b #8	ENSGT00940000155116.b #9	ENSGT00950000183055.b.a #10	ENSGT00940000157323 #11	ENSGT00390000008458 #12	ENSGT00940000161583 #13	ENSGT00390000008984 #14	ENSGT00940000162309 #15	ENSGT00390000010494 #16	ENSGT00390000003555 #17	ENSGT00940000156842 #18	ENSGT00640000091487 #19	ENSGT01060000248588.a.c.b #20	ENSGT00390000012346 #21	ENSGT00940000155372 #22	ENSGT00950000183130.A #23	ENSGT01010000222815	ENSGT00940000155988 #25	ENSGT01070000253744.a.b #26	ENSGT00510000046908.a.a.b	ENSGT00390000007586.a.b	ENSGT00940000158340	ENSGT00940000153395.a	ENSGT00940000155475	ENSGT00800000124172	ENSGT00530000064570	ENSGT00940000156337	ENSGT00950000183027.b	ENSGT00950000183054.a.a.a	ENSGT00950000182924.A.b.a.b
Rodentia	ANCESTRAL SPECIES	13	ENSGT00390000001301 #7	ENSGT00940000155719.b #8	ENSGT00940000155116.b #9	ENSGT00950000183055.b.a #10	ENSGT00940000157323 #11	ENSGT00390000008458 #12	ENSGT00940000161583 #13	ENSGT00390000008984 #14	ENSGT00940000162309 #15	ENSGT00390000010494 #16	ENSGT00390000003555 #17	ENSGT00940000156842 #18	ENSGT00640000091487 #19	ENSGT01060000248588.a.c.b #20	ENSGT00390000012346 #21	ENSGT00940000155372 #22	ENSGT00950000183130.A #23	ENSGT01010000222815	ENSGT00940000155988 #25	ENSGT01070000253744.a.b #26	ENSGT00510000046908.a.a.b	ENSGT00390000007586.a.b	ENSGT00940000158340	ENSGT00940000153395.a	ENSGT00940000155475	ENSGT00800000124172	ENSGT00530000064570	ENSGT00940000156337	ENSGT00950000183027.b	ENSGT00950000183054.a.a.a	ENSGT00950000182924.A.b.a.b
Rodentia_B	ANCESTRAL SPECIES	30	ENSGT00390000001301 #7	ENSGT00940000155719.b #8	ENSGT00940000155116.b #9	ENSGT00950000183055.b.a #10	ENSGT00940000157323 #11	ENSGT00390000008458 #12	ENSGT00940000161583 #13	ENSGT00390000008984 #14	ENSGT00940000162309 #15	ENSGT00390000010494 #16	ENSGT00390000003555 #17	ENSGT00940000156842 #18	ENSGT00640000091487 #19	ENSGT01060000248588.a.c.b #20	ENSGT00390000012346 #21	ENSGT00940000155372 #22	ENSGT00950000183130.A #23	ENSGT01010000222815	ENSGT00940000155988 #25	ENSGT01070000253744.a.b #26	ENSGT00510000046908.a.a.b	ENSGT00390000007586.a.b	ENSGT00940000158340	ENSGT00940000153395.a	ENSGT00940000155475	ENSGT00800000124172	ENSGT00530000064570	ENSGT00940000156337	ENSGT00950000183027.b	ENSGT00950000183054.a.a.a	ENSGT00950000182924.A.b.a.b
Myomorpha	ANCESTRAL SPECIES	41	ENSGT00390000001301 #7	ENSGT00940000155719.b #8	ENSGT00940000155116.b #9	ENSGT00950000183055.b.a #10	ENSGT00940000157323 #11	ENSGT00390000008458 #12	ENSGT00940000161583 #13	ENSGT00390000008984 #14	ENSGT00940000162309 #15	ENSGT00390000010494 #16	ENSGT00390000003555 #17	ENSGT00940000156842 #18	ENSGT00640000091487 #19	ENSGT01060000248588.a.c.b #20	ENSGT00390000012346 #21	ENSGT00940000155372 #22	ENSGT00950000183130.A #23	ENSGT01010000222815	ENSGT00940000155988 #25
Muroidea	ANCESTRAL SPECIES	56	ENSGT00390000001301 #7	ENSGT00940000155719.b #8	ENSGT00940000155116.b #9	ENSGT00950000183055.b.a #10	ENSGT00940000157323 #11	ENSGT00390000008458 #12	ENSGT00940000161583 #13	ENSGT00390000008984 #14	ENSGT00940000162309 #15	ENSGT00390000010494 #16	ENSGT00390000003555 #17	ENSGT00940000156842 #18	ENSGT00640000091487 #19	ENSGT01060000248588.a.c.b #20	ENSGT00390000012346 #21	ENSGT00940000155372 #22	ENSGT00950000183130.A #23	ENSGT01010000222815	ENSGT00940000155988 #25
Muroidea_A	ANCESTRAL SPECIES	5	ENSGT00390000001301 #7	ENSGT00940000155719.b #8	ENSGT00940000155116.b #9	ENSGT00950000183055.b.a #10	ENSGT00940000157323 #11	ENSGT00390000008458 #12	ENSGT00940000161583 #13	ENSGT00390000008984 #14	ENSGT00940000162309 #15	ENSGT00390000010494 #16	ENSGT00390000003555 #17	ENSGT00940000156842 #18	ENSGT00640000091487 #19	ENSGT01060000248588.a.c.b #20	ENSGT00390000012346 #21	ENSGT00940000155372 #22	ENSGT00950000183130.A #23	ENSGT01010000222815	ENSGT00940000155988 #25	ENSGT00950000183169.C #27	ENSGT00940000157312	ENSGT00940000153661.a.a	ENSGT00940000153661.b.b	ENSGT00940000156941	ENSGT00940000154552.b #28	ENSGT00940000156162.C.k	ENSGT00940000160614 #29	ENSGT00940000154384.h.b.f #30	ENSGT00950000183189.a.b.a #31	ENSGT00390000015010	ENSGT00390000013701 #32
Murinae	ANCESTRAL SPECIES	5	ENSGT00390000001301 #7	ENSGT00940000155719.b #8	ENSGT00940000155116.b #9	ENSGT00950000183055.b.a #10	ENSGT00940000157323 #11	ENSGT00390000008458 #12	ENSGT00940000161583 #13	ENSGT00390000008984 #14	ENSGT00940000162309 #15	ENSGT00390000010494 #16	ENSGT00390000003555 #17	ENSGT00940000156842 #18	ENSGT00640000091487 #19	ENSGT01060000248588.a.c.b #20	ENSGT00390000012346 #21	ENSGT00940000155372 #22	ENSGT00950000183130.A #23	ENSGT01010000222815	ENSGT00940000155988 #25	ENSGT00950000183169.C #27	ENSGT00940000157312	ENSGT00940000153661.a.a	ENSGT00940000156941	ENSGT00940000154552.b #28	ENSGT00940000156162.C.k	ENSGT00940000160614 #29	ENSGT00940000154384.h.b.f #30	ENSGT00950000183189.a.b.a #31	ENSGT00390000015010	ENSGT00390000013701 #32	ENSGT00940000155931 #33
Mus	ANCESTRAL SPECIES	7	ENSGT00390000001301 #7	ENSGT00940000155719.b #8	ENSGT00940000155116.b #9	ENSGT00950000183055.b.a #10	ENSGT00940000157323 #11	ENSGT00390000008458 #12	ENSGT00940000161583 #13	ENSGT00390000008984 #14	ENSGT00940000162309 #15	ENSGT00390000010494 #16	ENSGT00390000003555 #17	ENSGT00940000156842 #18	ENSGT00640000091487 #19	ENSGT01060000248588.a.c.b #20	ENSGT00390000012346 #21	ENSGT00940000155372 #22	ENSGT00950000183130.A #23	ENSGT01010000222815	ENSGT00860000136163 #24	ENSGT00940000155988 #25	ENSGT00950000183169.C #27	ENSGT00940000157312	ENSGT00940000153661.a.a	ENSGT00940000156941	ENSGT00940000154552.b #28	ENSGT00940000156162.C.k	ENSGT00940000160614 #29	ENSGT00940000154384.h.b.f #30	ENSGT00950000183189.a.b.a #31	ENSGT00390000015010	ENSGT00390000013701 #32
Shrew mouse	MODERN SPECIES	17	Intu (MGP_PahariEiJ_G0026396) #7	Fat4 (MGP_PahariEiJ_G0026395) #8	Ankrd50 (MGP_PahariEiJ_G0026394) #9	Spry1 (MGP_PahariEiJ_G0026392) #10	Spata5 (MGP_PahariEiJ_G0026391) #11	Nudt6 (MGP_PahariEiJ_G0026390) #12	Fgf2 (MGP_PahariEiJ_G0026389) #13	Bbs12 (MGP_PahariEiJ_G0026388) #14	Cetn4 (MGP_PahariEiJ_G0026387) #15	Il21 (MGP_PahariEiJ_G0026386) #16	Il2 (MGP_PahariEiJ_G0026385) #17	Adad1 (MGP_PahariEiJ_G0026384) #18	Bltp1 (MGP_PahariEiJ_G0026383) #19	Trpc3 (MGP_PahariEiJ_G0026382) #20	Bbs7 (MGP_PahariEiJ_G0026381) #21	Ccna2 (MGP_PahariEiJ_G0026380) #22	Exosc9 (MGP_PahariEiJ_G0026379) #23	MGP_PahariEiJ_G0026378 #24	Anxa5 (MGP_PahariEiJ_G0026377) #25	Qrfpr (MGP_PahariEiJ_G0026376) #26	Zfp267 (MGP_PahariEiJ_G0026375) #27	MGP_PahariEiJ_G0026374 #28	Sox2 (MGP_PahariEiJ_G0026373) #29	Dnajc19 (MGP_PahariEiJ_G0026372) #30	Fxr1 (MGP_PahariEiJ_G0026371) #31	MGP_PahariEiJ_G0026370 #32	Pex5l (MGP_PahariEiJ_G0026369) #33	Usp13 (MGP_PahariEiJ_G0026368) #34	Ndufb5 (MGP_PahariEiJ_G0026367) #35	Mrpl47 (MGP_PahariEiJ_G0026366) #36	Actl6a (MGP_PahariEiJ_G0026365) #37
Mus_A	ANCESTRAL SPECIES	9	ENSGT00390000001301 #7	ENSGT00940000155719.b #8	ENSGT00940000155116.b #9	ENSGT00950000183055.b.a #10	ENSGT00940000157323 #11	ENSGT00390000008458 #12	ENSGT00940000161583 #13	ENSGT00390000008984 #14	ENSGT00940000162309 #15	ENSGT00390000010494 #16	ENSGT00390000003555 #17	ENSGT00940000156842 #18	ENSGT00640000091487 #19	ENSGT01060000248588.a.c.b #20	ENSGT00390000012346 #21	ENSGT00940000155372 #22	ENSGT00950000183130.A #23	ENSGT01010000222815	ENSGT00860000136163 #24	ENSGT00940000155988 #25	ENSGT00950000183169.C #27	ENSGT00940000157312	ENSGT00940000153661.a.a	ENSGT00940000153661.b.b	ENSGT00940000156941	ENSGT00940000154552.b #28	ENSGT00940000156162.C.k	ENSGT00940000160614 #29	ENSGT00940000154384.h.b.f #30	ENSGT00950000183189.a.b.a #31	ENSGT00390000015010
Mus_B	ANCESTRAL SPECIES	8	ENSGT00390000001301 #7	ENSGT00940000155719.b #8	ENSGT00940000155116.b #9	ENSGT00950000183055.b.a #10	ENSGT00940000157323 #11	ENSGT00390000008458 #12	ENSGT00940000161583 #13	ENSGT00390000008984 #14	ENSGT00940000162309 #15	ENSGT00390000010494 #16	ENSGT00390000003555 #17	ENSGT00940000156842 #18	ENSGT00640000091487 #19	ENSGT01060000248588.a.c.b #20	ENSGT00390000012346 #21	ENSGT00940000155372 #22	ENSGT00950000183130.A #23	ENSGT01010000222815	ENSGT00860000136163 #24	ENSGT00940000155988 #25	ENSGT00950000183169.C #27	ENSGT00940000157312	ENSGT00940000153661.a.a	ENSGT00940000156941	ENSGT00940000154552.b #28	ENSGT00940000156162.C.k	ENSGT00940000160614 #29	ENSGT00940000154384.h.b.f #30	ENSGT00950000183189.a.b.a #31	ENSGT00390000015010	ENSGT00390000013701 #32
Mus_C	ANCESTRAL SPECIES	6	ENSGT00940000160648	ENSGT00390000001301 #7	ENSGT00940000155116.b #9	ENSGT00950000183055.b.a #10	ENSGT00940000157323 #11	ENSGT00390000008458 #12	ENSGT00940000161583 #13	ENSGT00390000008984 #14	ENSGT00940000162309 #15	ENSGT00390000010494 #16	ENSGT00390000003555 #17	ENSGT00940000156842 #18	ENSGT00640000091487 #19	ENSGT01060000248588.a.c.b #20	ENSGT00390000012346 #21	ENSGT00940000155372 #22	ENSGT00950000183130.A #23	ENSGT01010000222815	ENSGT00860000136163 #24	ENSGT00940000155988 #25	ENSGT00950000183169.C #27	ENSGT00940000157312	ENSGT00940000153661.a.a	ENSGT00940000156941	ENSGT00940000154552.b #28	ENSGT00940000156162.C.k	ENSGT00940000160614 #29	ENSGT00940000154384.h.b.f #30	ENSGT00950000183189.a.b.a #31	ENSGT00390000015010	ENSGT00390000013701 #32
spretus	MODERN SPECIES	12	Intu (MGP_SPRETEiJ_G0025890) #7	Fat4 (MGP_SPRETEiJ_G0025889) #8	Ankrd50 (MGP_SPRETEiJ_G0025888) #9	Spry1 (MGP_SPRETEiJ_G0025886) #10	Spata5 (MGP_SPRETEiJ_G0025885) #11	Nudt6 (MGP_SPRETEiJ_G0025884) #12	Fgf2 (MGP_SPRETEiJ_G0025883) #13	Bbs12 (MGP_SPRETEiJ_G0025882) #14	Cetn4 (MGP_SPRETEiJ_G0025881) #15	Il21 (MGP_SPRETEiJ_G0025880) #16	Il2 (MGP_SPRETEiJ_G0025879) #17	MGP_SPRETEiJ_G0025878 #18	MGP_SPRETEiJ_G0025877 #19	Trpc3 (MGP_SPRETEiJ_G0025876) #20	Bbs7 (MGP_SPRETEiJ_G0025875) #21	Ccna2 (MGP_SPRETEiJ_G0025874) #22	Exosc9 (MGP_SPRETEiJ_G0025873) #23	MGP_SPRETEiJ_G0025872 #24	Anxa5 (MGP_SPRETEiJ_G0025871) #25	Qrfpr (MGP_SPRETEiJ_G0025870) #26	Zfp267 (MGP_SPRETEiJ_G0025869) #27	Acad9 (MGP_SPRETEiJ_G0025868)	MGP_SPRETEiJ_G0025867	Mccc1 (MGP_SPRETEiJ_G0025866)	MGP_SPRETEiJ_G0025865 #28	Atp11b (MGP_SPRETEiJ_G0025864)	Sox2 (MGP_SPRETEiJ_G0025863) #29	Dnajc19 (MGP_SPRETEiJ_G0025862) #30	Fxr1 (MGP_SPRETEiJ_G0025861) #31	Ccdc39 (MGP_SPRETEiJ_G0025860)	Ttc14 (MGP_SPRETEiJ_G0025859) #32
Steppe mouse	MODERN SPECIES	2979		Spry1 (ENSMSIG00000011699) #10	Spata5 (ENSMSIG00000011608) #11	Nudt6 (ENSMSIG00000011537) #12	Fgf2 (ENSMSIG00000011514) #13	ENSMSIG00000011508	Bbs12 (ENSMSIG00000011504) #14	ENSMSIG00000011420 #15	Il21 (ENSMSIG00000011385) #16	Il2 (ENSMSIG00000011366) #17	ENSMSIG00000011352	Adad1 (ENSMSIG00000011307) #18	Bltp1 (ENSMSIG00000010361) #19	Trpc3 (ENSMSIG00000010293) #20	Bbs7 (ENSMSIG00000010231) #21	Ccna2 (ENSMSIG00000010165) #22	Exosc9 (ENSMSIG00000010121) #23	Smim43 (ENSMSIG00000010117)	1810062G17Rik (ENSMSIG00000010099) #24	Anxa5 (ENSMSIG00000010071) #25
Mouse	MODERN SPECIES	12	Fat4 (ENSMUSG00000046743) #8	Ankrd50 (ENSMUSG00000044864) #9	Gm5148 (ENSMUSG00000058174)	Spry1 (ENSMUSG00000037211) #10	Spata5 (ENSMUSG00000027722) #11	Nudt6 (ENSMUSG00000050174) #12	Fgf2 (ENSMUSG00000037225) #13	Bbs12 (ENSMUSG00000051444) #14	Cetn4 (ENSMUSG00000045031) #15	Il21 (ENSMUSG00000027718) #16	Il2 (ENSMUSG00000027720) #17	Adad1 (ENSMUSG00000027719) #18	Bltp1 (ENSMUSG00000037270) #19	Trpc3 (ENSMUSG00000027716) #20	Bbs7 (ENSMUSG00000037325) #21	Ccna2 (ENSMUSG00000027715) #22	Exosc9 (ENSMUSG00000027714) #23	Smim43 (ENSMUSG00000085007)	1810062G17Rik (ENSMUSG00000027713) #24	Anxa5 (ENSMUSG00000027712) #25	Qrfpr (ENSMUSG00000058400) #26	Zfp267 (ENSMUSG00000033883) #27	Acad9 (ENSMUSG00000027710)	Ccdc144b (ENSMUSG00000047696)	Mccc1 (ENSMUSG00000027709)	Dcun1d1 (ENSMUSG00000027708) #28	Atp11b (ENSMUSG00000037400)	Sox2 (ENSMUSG00000074637) #29	Dnajc19 (ENSMUSG00000027679) #30	Fxr1 (ENSMUSG00000027680) #31	Ccdc39 (ENSMUSG00000027676)
Ryukyu mouse	MODERN SPECIES	12	Intu (MGP_CAROLIEiJ_G0024956) #7	Fat4 (MGP_CAROLIEiJ_G0024955) #8	Ankrd50 (MGP_CAROLIEiJ_G0024954) #9	Spry1 (MGP_CAROLIEiJ_G0024952) #10	Spata5 (MGP_CAROLIEiJ_G0024951) #11	Nudt6 (MGP_CAROLIEiJ_G0024950) #12	Fgf2 (MGP_CAROLIEiJ_G0024949) #13	Bbs12 (MGP_CAROLIEiJ_G0024948) #14	Cetn4 (MGP_CAROLIEiJ_G0024947) #15	Il21 (MGP_CAROLIEiJ_G0024946) #16	Il2 (MGP_CAROLIEiJ_G0024945) #17	Adad1 (MGP_CAROLIEiJ_G0024944) #18	Bltp1 (MGP_CAROLIEiJ_G0024943) #19	Trpc3 (MGP_CAROLIEiJ_G0024942) #20	Bbs7 (MGP_CAROLIEiJ_G0024941) #21	Ccna2 (MGP_CAROLIEiJ_G0024940) #22	Exosc9 (MGP_CAROLIEiJ_G0024939) #23	MGP_CAROLIEiJ_G0024938 #24	Anxa5 (MGP_CAROLIEiJ_G0024937) #25	Qrfpr (MGP_CAROLIEiJ_G0024936) #26	Zfp267 (MGP_CAROLIEiJ_G0024935) #27	MGP_CAROLIEiJ_G0024934	MGP_CAROLIEiJ_G0024933	Mccc1 (MGP_CAROLIEiJ_G0024932)	MGP_CAROLIEiJ_G0024931 #28	Atp11b (MGP_CAROLIEiJ_G0024930)	Sox2 (MGP_CAROLIEiJ_G0024929) #29	MGP_CAROLIEiJ_G0024928 #30	Fxr1 (MGP_CAROLIEiJ_G0024927) #31	Ccdc39 (MGP_CAROLIEiJ_G0024926)	Ttc14 (MGP_CAROLIEiJ_G0024925) #32
Rat	MODERN SPECIES	11	Fat4 (ENSRNOG00000028335) #8	Ankrd50 (ENSRNOG00000010534) #9	ENSRNOG00000067850	Spry1 (ENSRNOG00000025371) #10	Spata5 (ENSRNOG00000017462) #11	Nudt6 (ENSRNOG00000017420) #12	Fgf2 (ENSRNOG00000017392) #13	Bbs12 (ENSRNOG00000068263) #14	Cetn4 (ENSRNOG00000026162) #15	Il21 (ENSRNOG00000017376) #16	Il2 (ENSRNOG00000017348) #17	Adad1 (ENSRNOG00000017246) #18	Bltp1 (ENSRNOG00000038436) #19	Trpc3 (ENSRNOG00000016070) #20	Bbs7 (ENSRNOG00000015816) #21	Ccna2 (ENSRNOG00000015423) #22	Exosc9 (ENSRNOG00000014674) #23	Smim43 (ENSRNOG00000070831)	Anxa5 (ENSRNOG00000014453) #25	Qrfpr (ENSRNOG00000014414) #26	Arsl (ENSRNOG00000028350)	ENSRNOG00000066024	Zfp267 (ENSRNOG00000042283) #27	Acad9 (ENSRNOG00000014178)	ENSRNOG00000065565	Ccdc144b (ENSRNOG00000056177)	Mccc1 (ENSRNOG00000013293)	Dcun1d1 (ENSRNOG00000012734) #28	Atp11b (ENSRNOG00000052116)	Sox2 (ENSRNOG00000012199) #29	Dnajc19 (ENSRNOG00000049819) #30
Cricetidae	ANCESTRAL SPECIES	6	ENSGT00390000001301 #7	ENSGT00940000155719.b #8	ENSGT00940000155116.b #9	ENSGT00950000183055.b.a #10	ENSGT00940000157323 #11	ENSGT00390000008458 #12	ENSGT00940000161583 #13	ENSGT00390000008984 #14	ENSGT00940000162309 #15	ENSGT00390000010494 #16	ENSGT00390000003555 #17	ENSGT00940000156842 #18	ENSGT00640000091487 #19	ENSGT01060000248588.a.c.b #20	ENSGT00390000012346 #21	ENSGT00940000155372 #22	ENSGT00950000183130.A #23	ENSGT00940000155988 #25	ENSGT00950000183169.C.d #27	ENSGT00940000157312	ENSGT00940000153661.a.a	ENSGT00940000153661.b.b	ENSGT00940000156941	ENSGT00940000154552.b #28	ENSGT00940000156162.C.k	ENSGT00940000160614 #29	ENSGT00940000154384.h.a ##30	ENSGT00950000183189.a.b.a #31	ENSGT00390000015010	ENSGT00390000013701.g.b #32	ENSGT00390000013701.g.a #32
Cricetinae	ANCESTRAL SPECIES	13	ENSGT00390000001301 #7	ENSGT00940000155719.b #8	ENSGT00940000155116.b #9	ENSGT00950000183055.b.a #10	ENSGT00940000157323 #11	ENSGT00390000008458 #12	ENSGT00940000161583 #13	ENSGT00390000008984 #14	ENSGT00940000162309 #15	ENSGT00390000010494 #16	ENSGT00390000003555 #17	ENSGT00940000156842 #18	ENSGT00640000091487 #19	ENSGT01060000248588.a.c.b #20	ENSGT00390000012346 #21	ENSGT00940000155372 #22	ENSGT00950000183130.A #23	ENSGT00940000155988 #25	ENSGT01070000253744.a.b #26	ENSGT00950000183169.C.d #27	ENSGT00940000157312	ENSGT00940000153661.a.a	ENSGT00940000156941	ENSGT00940000154552.b #28	ENSGT00940000156162.C.k	ENSGT00940000160614 #29	ENSGT00940000154384.h.a ##30	ENSGT00950000183189.a.b.a #31	ENSGT00390000015010	ENSGT00390000013701.g.b #32	ENSGT00390000013701.g.a #32
Chinese hamster chok1gshd	MODERN SPECIES	352	Ankrd50 (ENSCGRG00001004029) #9	ENSCGRG00001005629	ENSCGRG00001014736	Spry1 (ENSCGRG00001009131) #10	Spata5 (ENSCGRG00001021381) #11	Nudt6 (ENSCGRG00001018080) #12	Fgf2 (ENSCGRG00001019372) #13	Bbs12 (ENSCGRG00001004097) #14	Cetn4 (ENSCGRG00001014508) #15	Il21 (ENSCGRG00001022512) #16	Il2 (ENSCGRG00001020461) #17	Adad1 (ENSCGRG00001010493) #18	Bltp1 (ENSCGRG00001009244) #19	Trpc3 (ENSCGRG00001021196) #20	Bbs7 (ENSCGRG00001022476) #21	Ccna2 (ENSCGRG00001021415) #22	Exosc9 (ENSCGRG00001023030) #23	Anxa5 (ENSCGRG00001011395) #25	Qrfpr (ENSCGRG00001015065) #26	Zfp267 (ENSCGRG00001019794) #27	Acad9 (ENSCGRG00001017444)	ENSCGRG00001017668	Mccc1 (ENSCGRG00001012469)	ENSCGRG00001019778 #28	ENSCGRG00001013592	Atp11b (ENSCGRG00001021308)	Sox2 (ENSCGRG00001008732) #29	ENSCGRG00001000090 ##30	Fxr1 (ENSCGRG00001024795) #31	Ccdc39 (ENSCGRG00001018347)	Ttc14 (ENSCGRG00001021605) #32
Golden Hamster	MODERN SPECIES	636	Intu (ENSMAUG00000016415) #7	Fat4 (ENSMAUG00000012344) #8	ENSMAUG00000016745 #9	Spry1 (ENSMAUG00000016633) #10	Spata5 (ENSMAUG00000012654) #11	Nudt6 (ENSMAUG00000015235) #12	Fgf2 (ENSMAUG00000014645) #13	Bbs12 (ENSMAUG00000014987) #14	Cetn4 (ENSMAUG00000000102) #15	Il21 (ENSMAUG00000000414) #16	Il2 (ENSMAUG00000017109) #17	Adad1 (ENSMAUG00000018314) #18	Bltp1 (ENSMAUG00000017326) #19	ENSMAUG00000009808	Bbs7 (ENSMAUG00000001973) #21	Ccna2 (ENSMAUG00000018247) #22	Exosc9 (ENSMAUG00000008629) #23	Anxa5 (ENSMAUG00000014445) #25	Qrfpr (ENSMAUG00000016873) #26	Zfp267 (ENSMAUG00000000240) #27	Acad9 (ENSMAUG00000013695)	ENSMAUG00000011985	ENSMAUG00000000987	Mccc1 (ENSMAUG00000018926)	ENSMAUG00000019275	ENSMAUG00000018021 #28	Atp11b (ENSMAUG00000000325)	Sox2 (ENSMAUG00000017052) #29	ENSMAUG00000011285 ##30	Fxr1 (ENSMAUG00000001188) #31	Ccdc39 (ENSMAUG00000009369)
Cricetidae_B	ANCESTRAL SPECIES	71				ENSGT00950000183055.b.a #10	ENSGT00940000157323 #11	ENSGT00390000008458 #12	ENSGT00940000161583 #13	ENSGT00390000008984 #14	ENSGT00940000162309 #15	ENSGT00390000010494 #16	ENSGT00390000003555 #17	ENSGT00940000156842 #18	ENSGT00640000091487 #19	ENSGT01060000248588.a.c.b #20	ENSGT00390000012346 #21	ENSGT00940000155372 #22	ENSGT00950000183130.A #23	ENSGT01010000222815
Prairie vole	MODERN SPECIES	161				Spry1 (ENSMOCG00000001416) #10	Spata5 (ENSMOCG00000004564) #11	Nudt6 (ENSMOCG00000009378) #12	Fgf2 (ENSMOCG00000016462) #13	Cetn4 (ENSMOCG00000003304) #15	ENSMOCG00000011517	Il21 (ENSMOCG00000017450) #16	Il2 (ENSMOCG00000006543) #17	Adad1 (ENSMOCG00000013223) #18	Bltp1 (ENSMOCG00000000995) #19	Trpc3 (ENSMOCG00000004414) #20	Bbs7 (ENSMOCG00000000555) #21	Ccna2 (ENSMOCG00000000111) #22	Exosc9 (ENSMOCG00000007209) #23
Northern American deer mouse	MODERN SPECIES	19	ENSPEMG00000014607	Ankrd50 (ENSPEMG00000000443) #9	ENSPEMG00000028306	Spry1 (ENSPEMG00000030492) #10	Spata5 (ENSPEMG00000011499) #11	Nudt6 (ENSPEMG00000005707) #12	Fgf2 (ENSPEMG00000016190) #13	Bbs12 (ENSPEMG00000012255) #14	Cetn4 (ENSPEMG00000003679) #15	Il21 (ENSPEMG00000013277) #16	Il2 (ENSPEMG00000006965) #17	Adad1 (ENSPEMG00000013728) #18	Bltp1 (ENSPEMG00000000775) #19	Trpc3 (ENSPEMG00000010325) #20	Bbs7 (ENSPEMG00000011833) #21	Ccna2 (ENSPEMG00000009831) #22	Exosc9 (ENSPEMG00000000544) #23	Smim43 (ENSPEMG00000027033)	ENSPEMG00000025453	ENSPEMG00000025069	ENSPEMG00000029143	ENSPEMG00000030574	ENSPEMG00000023072	ENSPEMG00000023778	ENSPEMG00000022198	Agtr1b (ENSPEMG00000026806)	Cpb1 (ENSPEMG00000015871)	Cpa3 (ENSPEMG00000000978)	Gyg (ENSPEMG00000016029)	Hltf (ENSPEMG00000016172)	Hps3 (ENSPEMG00000006862)
Upper Galilee mountains blind mole rat	MODERN SPECIES	1479		Spry1 (ENSNGAG00000018272) #10	ENSNGAG00000024135	Spata5 (ENSNGAG00000009558) #11	Nudt6 (ENSNGAG00000019409) #12	Fgf2 (ENSNGAG00000019024) #13	ENSNGAG00000021800	Bbs12 (ENSNGAG00000012809) #14	Cetn4 (ENSNGAG00000020314) #15	Il21 (ENSNGAG00000010461) #16	Il2 (ENSNGAG00000017797) #17	Adad1 (ENSNGAG00000020288) #18	Bltp1 (ENSNGAG00000011522) #19	Trpc3 (ENSNGAG00000000966) #20	Bbs7 (ENSNGAG00000005124) #21	Ccna2 (ENSNGAG00000022010) #22	Exosc9 (ENSNGAG00000022671) #23
Lesser Egyptian jerboa	MODERN SPECIES	140	ENSJJAG00000019672	Spry1 (ENSJJAG00000019384) #10	Spata5 (ENSJJAG00000018681) #11	ENSJJAG00000011442 #12	ENSJJAG00000011162	Fgf2 (ENSJJAG00000008668) #13	Cetn4 (ENSJJAG00000001632) #15	Il21 (ENSJJAG00000000196) #16	Il2 (ENSJJAG00000022869) #17	Adad1 (ENSJJAG00000022661) #18	Bltp1 (ENSJJAG00000022082) #19	ENSJJAG00000018073	ENSJJAG00000013168	Trpc3 (ENSJJAG00000017994) #20	Bbs7 (ENSJJAG00000018393) #21	Ccna2 (ENSJJAG00000014491) #22	Exosc9 (ENSJJAG00000008858) #23	Anxa5 (ENSJJAG00000021568) #25	Acad9 (ENSJJAG00000015247)	ENSJJAG00000004057 #27	Fbxw17 (ENSJJAG00000021791)	ENSJJAG00000020570	Gng5c (ENSJJAG00000019410)	ENSJJAG00000012845	Naa35 (ENSJJAG00000017242)	ENSJJAG00000005663	Ntrk2 (ENSJJAG00000021752)
Kangaroo rat	MODERN SPECIES	379	ENSDORG00000014556 #9	ENSDORG00000026905 #9	ENSDORG00000028714 #9	Spry1 (ENSDORG00000014328) #10	Spata5 (ENSDORG00000000525) #11	Nudt6 (ENSDORG00000026866) #12	Fgf2 (ENSDORG00000027523) #13	ENSDORG00000013293 #14	ENSDORG00000029033 #15	Il21 (ENSDORG00000005664) #16	Il2 (ENSDORG00000014968) #17	Adad1 (ENSDORG00000015684) #18	Bltp1 (ENSDORG00000015310) #19	Trpc3 (ENSDORG00000015847) #20	Bbs7 (ENSDORG00000007687) #21	Ccna2 (ENSDORG00000007686) #22	Exosc9 (ENSDORG00000007684) #23	Anxa5 (ENSDORG00000006577) #25	Qrfpr (ENSDORG00000013419) #26	ENSDORG00000005102	Ndnf (ENSDORG00000003957)	Prdm5 (ENSDORG00000007739)	Mad2l1 (ENSDORG00000000355)
Rodentia_A	ANCESTRAL SPECIES	24	ENSGT00390000001301 #7	ENSGT00940000155719.b #8	ENSGT00940000155116.b #9	ENSGT00950000183055.b.a #10	ENSGT00940000157323 #11	ENSGT00390000008458 #12	ENSGT00940000161583 #13	ENSGT00390000008984 #14	ENSGT00940000162309 #15	ENSGT00390000010494 #16	ENSGT00390000003555 #17	ENSGT00940000156842 #18	ENSGT00640000091487 #19	ENSGT01060000248588.a.c.b #20	ENSGT00390000012346 #21	ENSGT00940000155372 #22	ENSGT00950000183130.A #23	ENSGT01010000222815	ENSGT00940000155988 #25	ENSGT01070000253744.a.b #26	ENSGT00510000046908.a.a.b	ENSGT00390000007586.a.b	ENSGT00940000158340	ENSGT00940000153395.a	ENSGT00940000155475	ENSGT00800000124172	ENSGT00530000064570	ENSGT00940000156337	ENSGT00950000183027.b	ENSGT00950000183054.a.a.a	ENSGT00950000182924.A.b.a.b
Sciuridae	ANCESTRAL SPECIES	38	ENSGT00390000001301 #7	ENSGT00940000155719.b #8	ENSGT00940000155116.b #9	ENSGT00950000183055.b.a #10	ENSGT00940000157323 #11	ENSGT00390000008458 #12	ENSGT00940000161583 #13	ENSGT00390000008984 #14	ENSGT00940000162309 #15	ENSGT00390000010494 #16	ENSGT00390000003555 #17	ENSGT00940000156842 #18	ENSGT00640000091487 #19	ENSGT01060000248588.a.c.b #20	ENSGT00390000012346 #21	ENSGT00940000155372 #22	ENSGT00950000183130.A #23	ENSGT01010000222815	ENSGT00940000155988 #25	ENSGT01070000253744.a.b #26	ENSGT00510000046908.a.a.b	ENSGT00390000007586.a.b	ENSGT00940000158340	ENSGT00940000153395.a	ENSGT00940000155475	ENSGT00800000124172	ENSGT00940000156337	ENSGT00950000183027.b	ENSGT00950000183054.a.a.a	ENSGT01060000248649.a	ENSGT00950000182924.A.b.a.b
Marmotini	ANCESTRAL SPECIES	45	ENSGT00390000001301 #7	ENSGT00940000155719.b #8	ENSGT00940000155116.b #9	ENSGT00950000183055.b.a #10	ENSGT00940000157323 #11	ENSGT00390000008458 #12	ENSGT00940000161583 #13	ENSGT00390000008984 #14	ENSGT00940000162309 #15	ENSGT00390000010494 #16	ENSGT00390000003555 #17	ENSGT00940000156842 #18	ENSGT00640000091487 #19	ENSGT01060000248588.a.c.b #20	ENSGT00390000012346 #21	ENSGT00940000155372 #22	ENSGT00950000183130.A #23	ENSGT01010000222815	ENSGT00940000155988 #25	ENSGT01070000253744.a.b #26	ENSGT00510000046908.a.a.b	ENSGT00390000007586.a.b	ENSGT00940000158340	ENSGT00940000153395.a
Marmotini_b	ANCESTRAL SPECIES	148	ENSGT00390000001301 #7	ENSGT00940000155719.b #8	ENSGT00940000155116.b #9	ENSGT00950000183055.b.a #10	ENSGT00940000157323 #11	ENSGT00390000008458 #12	ENSGT00940000161583 #13	ENSGT00390000008984 #14	ENSGT00940000162309 #15	ENSGT00390000010494 #16	ENSGT00390000003555 #17	ENSGT00940000156842 #18	ENSGT00640000091487 #19	ENSGT01060000248588.a.c.b #20	ENSGT00390000012346 #21	ENSGT00940000155372 #22	ENSGT00950000183130.A #23	ENSGT01010000222815	ENSGT00940000155988 #25	ENSGT01070000253744.a.b #26	ENSGT00510000046908.a.a.b	ENSGT00390000007586.a.b	ENSGT00940000158340	ENSGT00940000153395.a
Squirrel	MODERN SPECIES	262		FAT4 (ENSSTOG00000010020) #8	ANKRD50 (ENSSTOG00000020609) #9	SPRY1 (ENSSTOG00000019856) #10	SPATA5 (ENSSTOG00000016252) #11	NUDT6 (ENSSTOG00000020437) #12	FGF2 (ENSSTOG00000028359) #13	BBS12 (ENSSTOG00000010337) #14	ENSSTOG00000024309 #15	IL21 (ENSSTOG00000012108) #16	IL2 (ENSSTOG00000016100) #17	ADAD1 (ENSSTOG00000027523) #18	BLTP1 (ENSSTOG00000016095) #19	TRPC3 (ENSSTOG00000014731) #20	BBS7 (ENSSTOG00000026947) #21	CCNA2 (ENSSTOG00000008011) #22	EXOSC9 (ENSSTOG00000007984) #23	ANXA5 (ENSSTOG00000015236) #25	QRFPR (ENSSTOG00000011128) #26	ENSSTOG00000002218	NDNF (ENSSTOG00000026308)	PRDM5 (ENSSTOG00000004741)	MAD2L1 (ENSSTOG00000025410)
Arctic ground squirrel	MODERN SPECIES	504														TRPC3 (ENSUPAG00010003020) #20	BBS7 (ENSUPAG00010003036) #21	CCNA2 (ENSUPAG00010003078) #22	EXOSC9 (ENSUPAG00010003098) #23	SMIM43 (ENSUPAG00010003133)	ANXA5 (ENSUPAG00010003144) #25	QRFPR (ENSUPAG00010003178) #26	ENSUPAG00010003212	NDNF (ENSUPAG00010003281)	PRDM5 (ENSUPAG00010003287)	MAD2L1 (ENSUPAG00010003371)
Alpin marmot	MODERN SPECIES	5	FAT4 (ENSMMMG00000014294) #8	ANKRD50 (ENSMMMG00000014280) #9	SPRY1 (ENSMMMG00000014257) #10	SPATA5 (ENSMMMG00000014189) #11	ENSMMMG00000014177 #12	FGF2 (ENSMMMG00000014167) #13	BBS12 (ENSMMMG00000014165) #14	ENSMMMG00000014128 #15	ENSMMMG00000014115	IL21 (ENSMMMG00000014088) #16	IL2 (ENSMMMG00000014074) #17	ADAD1 (ENSMMMG00000014047) #18	BLTP1 (ENSMMMG00000013870) #19	TRPC3 (ENSMMMG00000013843) #20	BBS7 (ENSMMMG00000013792) #21	CCNA2 (ENSMMMG00000013774) #22	EXOSC9 (ENSMMMG00000013752) #23	ANXA5 (ENSMMMG00000013732) #25	QRFPR (ENSMMMG00000013643) #26	ENSMMMG00000013612	NDNF (ENSMMMG00000013604)	PRDM5 (ENSMMMG00000013584)	MAD2L1 (ENSMMMG00000013561)
Eurasian red squirrel	MODERN SPECIES	18	FAT4 (ENSSVLG00005016900) #8	ANKRD50 (ENSSVLG00005016833) #9	SPRY1 (ENSSVLG00005016820) #10	SPATA5 (ENSSVLG00005016625) #11	NUDT6 (ENSSVLG00005016540) #12	FGF2 (ENSSVLG00005016503) #13	BBS12 (ENSSVLG00005016487) #14	ENSSVLG00005016460 #15	ENSSVLG00005016447	IL21 (ENSSVLG00005016343) #16	IL2 (ENSSVLG00005016296) #17	ENSSVLG00005016021 #18	BLTP1 (ENSSVLG00005015963) #19	TRPC3 (ENSSVLG00005015770) #20	BBS7 (ENSSVLG00005015419) #21	CCNA2 (ENSSVLG00005015372) #22	ENSSVLG00005015214 #23	SMIM43 (ENSSVLG00005015189)	ANXA5 (ENSSVLG00005014980) #25	ENSSVLG00005014925	QRFPR (ENSSVLG00005014858) #26	NDNF (ENSSVLG00005014362)	PRDM5 (ENSSVLG00005014293)	MAD2L1 (ENSSVLG00005014204)	ENSSVLG00005014083	PDE5A (ENSSVLG00005013841)	FABP2 (ENSSVLG00005013640)	USP53 (ENSSVLG00005013592)	MYOZ2 (ENSSVLG00005013483)	ENSSVLG00005013417	SEC24D (ENSSVLG00005013288)
Hystricomorpha	ANCESTRAL SPECIES	38	ENSGT00390000001301 #7	ENSGT00940000155719.b #8	ENSGT00940000155116.b #9	ENSGT00950000183055.b.a #10	ENSGT00940000157323 #11	ENSGT00390000008458 #12	ENSGT00940000161583 #13	ENSGT00390000008984 #14	ENSGT00940000162309 #15	ENSGT00390000010494 #16	ENSGT00390000003555 #17	ENSGT00940000156842 #18	ENSGT00640000091487 #19	ENSGT01060000248588.a.c.b #20	ENSGT00390000012346 #21	ENSGT00940000155372 #22	ENSGT00950000183130.A #23	ENSGT01010000222815	ENSGT00940000155988 #25	ENSGT01070000253744.a.b #26	ENSGT00510000046908.a.a.b	ENSGT00390000007586.a.b	ENSGT00940000158340	ENSGT00940000153395.a	ENSGT00940000155475	ENSGT00800000124172	ENSGT00530000064570	ENSGT00940000156337	ENSGT00950000183027.b	ENSGT00950000183054.a.a.a	ENSGT00950000182924.A.b.a.b
Hystricomorpha_a	ANCESTRAL SPECIES	34	ENSGT00390000001301 #7	ENSGT00940000155719.b #8	ENSGT00940000155116.b #9	ENSGT00950000183055.b.a #10	ENSGT00940000157323 #11	ENSGT00390000008458 #12	ENSGT00940000161583 #13	ENSGT00390000008984 #14	ENSGT00940000162309 #15	ENSGT00390000010494 #16	ENSGT00390000003555 #17	ENSGT00940000156842 #18	ENSGT00640000091487 #19	ENSGT01060000248588.a.c.b #20	ENSGT00390000012346 #21	ENSGT00940000155372 #22	ENSGT00950000183130.A #23	ENSGT00940000155988 #25	ENSGT01070000253744.a.b #26	ENSGT00510000046908.a.a.b	ENSGT00390000007586.a.b	ENSGT00940000158340	ENSGT00940000153395.a	ENSGT00940000155475	ENSGT00800000124172	ENSGT00530000064570	ENSGT00940000156337	ENSGT00950000183027.b	ENSGT00950000183054.a.a.a	ENSGT00950000182924.A.b.a.b	ENSGT00550000075003
Hystricomorpha_b	ANCESTRAL SPECIES	75	ENSGT00390000001301 #7	ENSGT00940000155719.b #8	ENSGT00940000155116.b #9	ENSGT00950000183055.b.a #10	ENSGT00940000157323 #11	ENSGT00390000008458 #12	ENSGT00940000161583 #13	ENSGT00390000008984 #14	ENSGT00940000162309 #15	ENSGT00390000010494 #16	ENSGT00390000003555 #17	ENSGT00940000156842 #18	ENSGT00640000091487 #19	ENSGT01060000248588.a.c.b #20	ENSGT00390000012346 #21	ENSGT00940000155372 #22	ENSGT00950000183130.A #23	ENSGT00940000155988 #25	ENSGT01070000253744.a.b #26	ENSGT00510000046908.a.a.b	ENSGT00390000007586.a.b	ENSGT00940000158340	ENSGT00940000153395.a	ENSGT00940000155475	ENSGT00800000124172	ENSGT00530000064570	ENSGT00940000156337	ENSGT00950000183027.b	ENSGT00950000183054.a.a.a	ENSGT00950000182924.A.b.a.b	ENSGT00550000075003
Long-tailed chinchilla	MODERN SPECIES	135	INTU (ENSCLAG00000004954) #7	FAT4 (ENSCLAG00000006183) #8	ANKRD50 (ENSCLAG00000003314) #9	SPRY1 (ENSCLAG00000003787) #10	SPATA5 (ENSCLAG00000005265) #11	NUDT6 (ENSCLAG00000006306) #12	FGF2 (ENSCLAG00000003340) #13	ENSCLAG00000008111 #15	BBS12 (ENSCLAG00000017705) #14	IL21 (ENSCLAG00000009098) #16	IL2 (ENSCLAG00000009317) #17	ADAD1 (ENSCLAG00000004688) #18	BLTP1 (ENSCLAG00000007818) #19	TRPC3 (ENSCLAG00000003574) #20	BBS7 (ENSCLAG00000004340) #21	CCNA2 (ENSCLAG00000003880) #22	EXOSC9 (ENSCLAG00000004644) #23	ANXA5 (ENSCLAG00000004278) #25	ENSCLAG00000005382	QRFPR (ENSCLAG00000006789) #26	TNIP3 (ENSCLAG00000004304)	NDNF (ENSCLAG00000004819)	PRDM5 (ENSCLAG00000005392)	ENSCLAG00000003295	MAD2L1 (ENSCLAG00000003756)	PDE5A (ENSCLAG00000004806)	FABP2 (ENSCLAG00000004293)	C4orf3 (ENSCLAG00000005064)	USP53 (ENSCLAG00000005403)	MYOZ2 (ENSCLAG00000003567)	SYNPO2 (ENSCLAG00000004412)
Degu	MODERN SPECIES	297				SPRY1 (ENSODEG00000000325) #10	SPATA5 (ENSODEG00000000401) #11	NUDT6 (ENSODEG00000000982) #12	FGF2 (ENSODEG00000001008) #13	BBS12 (ENSODEG00000001051) #14	ENSODEG00000001131 #15	IL21 (ENSODEG00000001146) #16	IL2 (ENSODEG00000001158) #17	ADAD1 (ENSODEG00000001197) #18	BLTP1 (ENSODEG00000001505) #19	TRPC3 (ENSODEG00000001237) #20	BBS7 (ENSODEG00000001786) #21	CCNA2 (ENSODEG00000002082) #22	EXOSC9 (ENSODEG00000000589) #23	ANXA5 (ENSODEG00000000798) #25
Guinea pig	MODERN SPECIES	7	INTU (ENSCPOG00000001974) #7	FAT4 (ENSCPOG00000003631) #8	ANKRD50 (ENSCPOG00000012841) #9	SPRY1 (ENSCPOG00000035769) #10	SPATA5 (ENSCPOG00000005397) #11	ENSCPOG00000030140 #12	FGF2 (ENSCPOG00000005386) #13	BBS12 (ENSCPOG00000005539) #14	ENSCPOG00000021793 #15	IL21 (ENSCPOG00000012431) #16	IL2 (ENSCPOG00000008265) #17	ADAD1 (ENSCPOG00000014455) #18	BLTP1 (ENSCPOG00000010581) #19	TRPC3 (ENSCPOG00000001231) #20	BBS7 (ENSCPOG00000001229) #21	CCNA2 (ENSCPOG00000010373) #22	EXOSC9 (ENSCPOG00000034344) #23	ANXA5 (ENSCPOG00000038586) #25	QRFPR (ENSCPOG00000001530) #26	TNIP3 (ENSCPOG00000003813)	NDNF (ENSCPOG00000009703)	PRDM5 (ENSCPOG00000012883)	MAD2L1 (ENSCPOG00000030145)	PDE5A (ENSCPOG00000008756)	FABP2 (ENSCPOG00000008750)	C4orf3 (ENSCPOG00000021561)	ENSCPOG00000001323	MYOZ2 (ENSCPOG00000007291)	SYNPO2 (ENSCPOG00000020548)	SEC24D (ENSCPOG00000004621)	METTL14 (ENSCPOG00000037880)
Naked mole-rat female	DUPLICATION
Naked mole-rat female	MODERN SPECIES	14	ENSHGLG00000038666	OR9I1 (ENSHGLG00000038340)	ENSHGLG00000035281	OR9Q2 (ENSHGLG00000019956)	ENSHGLG00000020138	ENSHGLG00000044886	ENSHGLG00000033600	ENSHGLG00000036719	ENSHGLG00000020231	OR5B17 (ENSHGLG00000045759)	ENSHGLG00000049454	ENSHGLG00000042677	ENSHGLG00000037266	ENSHGLG00000046469	ENSHGLG00000037157	ENSHGLG00000046158 #22	ENSHGLG00000050170	ENSHGLG00000046303	ENSHGLG00000043701	OR5B2 (ENSHGLG00000038754)	LPXN (ENSHGLG00000005443)	ENSHGLG00000004685	CNTF (ENSHGLG00000037191)	ENSHGLG00000044293	ENSHGLG00000034597	ENSHGLG00000034438	ENSHGLG00000003602	ENSHGLG00000050943	ENSHGLG00000034936	GLYAT (ENSHGLG00000007196)	ENSHGLG00000048064
Naked mole-rat female	DUPLICATION
Naked mole-rat female	MODERN SPECIES	22	ENSHGLG00000044181	ENSHGLG00000035137	ENSHGLG00000039446	ENSHGLG00000018796 #8	ENSHGLG00000002030 #16	ENSHGLG00000041196 #14	SPATA5 (ENSHGLG00000002665) #11	NUDT6 (ENSHGLG00000040807) #12	ENSHGLG00000032095 #10	ANKRD50 (ENSHGLG00000010124) #9	ENSHGLG00000010627	ENSHGLG00000047556	ENSHGLG00000003394 #19	ENSHGLG00000003167 #20	BBS7 (ENSHGLG00000002879) #21	ENSHGLG00000002599 #22	EXOSC9 (ENSHGLG00000002467) #23	SMIM43 (ENSHGLG00000036790)	ENSHGLG00000035708 #25	ENSHGLG00000038676	ENSHGLG00000002280	ENSHGLG00000004934 #26	ENSHGLG00000033298	TNIP3 (ENSHGLG00000003668)	NDNF (ENSHGLG00000003417)	PRDM5 (ENSHGLG00000003010)	ENSHGLG00000040170	ENSHGLG00000004064	ENSHGLG00000047434	ENSHGLG00000000181	ENSHGLG00000049304
Naked mole-rat female	MODERN SPECIES	24	ENSHGLG00000002410	ANKRD42 (ENSHGLG00000007952)	ENSHGLG00000014010	ENSHGLG00000043756	ENSHGLG00000046380	ENSHGLG00000042096	DLG2 (ENSHGLG00000004449)	ENSHGLG00000037235	ENSHGLG00000003500	ENSHGLG00000003233	CREBZF (ENSHGLG00000003083)	CCDC89 (ENSHGLG00000037872)	ENSHGLG00000002340	CCDC83 (ENSHGLG00000036065)	PICALM (ENSHGLG00000001052)	ENSHGLG00000001667 #22	EED (ENSHGLG00000001511)	ENSHGLG00000041908	CCDC81 (ENSHGLG00000001095)	ENSHGLG00000038302	ENSHGLG00000001103	ME3 (ENSHGLG00000001044)	ENSHGLG00000000902	PRSS23 (ENSHGLG00000047569)	FZD4 (ENSHGLG00000000698)	ENSHGLG00000032437	ENSHGLG00000043753	TMEM135 (ENSHGLG00000001739)	ENSHGLG00000045425	ENSHGLG00000034306	RAB38 (ENSHGLG00000041890)
Lagomorpha	ANCESTRAL SPECIES	93	ENSGT00390000001301 #7	ENSGT00940000155719.b #8	ENSGT00940000155116.b #9	ENSGT00950000183055.b.a #10	ENSGT00940000157323 #11	ENSGT00390000008458 #12	ENSGT00940000161583 #13	ENSGT00390000008984 #14	ENSGT00940000162309 #15	ENSGT00390000010494 #16	ENSGT00390000003555 #17	ENSGT00940000156842 #18	ENSGT00640000091487 #19	ENSGT01060000248588.a.c.b #20	ENSGT00390000012346 #21	ENSGT00940000155372 #22	ENSGT00950000183130.A #23	ENSGT01010000222815	ENSGT00940000155988 #25	ENSGT01070000253744.a.b #26	ENSGT00510000046908.a.a.b	ENSGT00390000007586.a.b	ENSGT00940000158340	ENSGT00940000153395.a	ENSGT00940000155475	ENSGT00800000124172	ENSGT00530000064570	ENSGT00940000156337	ENSGT00950000183027.b	ENSGT00950000183054.a.a.a	ENSGT00950000182924.A.b.a.b
Rabbit	DUPLICATION
Rabbit	MODERN SPECIES	6	ENSOCUG00000024721	ENSOCUG00000000482 #12	FGF2 (ENSOCUG00000000476) #13	BBS12 (ENSOCUG00000015252) #14	ENSOCUG00000022164 #15	IL21 (ENSOCUG00000015304) #16	IL-2 (ENSOCUG00000010100) #17	ADAD1 (ENSOCUG00000012989) #18	BLTP1 (ENSOCUG00000014811) #19	TRPC3 (ENSOCUG00000009487) #20	ENSOCUG00000031507	ENSOCUG00000030634	ENSOCUG00000034627	ENSOCUG00000036368	BBS7 (ENSOCUG00000003053) #21	ENSOCUG00000028042 #22	EXOSC9 (ENSOCUG00000003046) #23	SMIM43 (ENSOCUG00000038273)	ANXA5 (ENSOCUG00000017760) #25	ENSOCUG00000007852	ENSOCUG00000016694	QRFPR (ENSOCUG00000000563) #26	TNIP3 (ENSOCUG00000001973)	NDNF (ENSOCUG00000002038)	ENSOCUG00000036546	PRDM5 (ENSOCUG00000013454)	MAD2L1 (ENSOCUG00000008243)	PDE5A (ENSOCUG00000009417)	FABP2 (ENSOCUG00000003293)	ENSOCUG00000030903	USP53 (ENSOCUG00000013733)
Rabbit	MODERN SPECIES	5	CD200 (ENSOCUG00000009949)	ENSOCUG00000029264	SLC9C1 (ENSOCUG00000009937)	GCSAM (ENSOCUG00000009933)	C3orf52 (ENSOCUG00000009929)	TMPRSS7 (ENSOCUG00000009920)	TAGLN3 (ENSOCUG00000003970)	ABHD10 (ENSOCUG00000003969)	PHLDB2 (ENSOCUG00000003962)	CD96 (ENSOCUG00000001351)	ZBED2 (ENSOCUG00000029023)	ENSOCUG00000017796	NECTIN3 (ENSOCUG00000000727)	ENSOCUG00000029031	ENSOCUG00000022089	ENSOCUG00000003051 #22	ENSOCUG00000003175	MORC1 (ENSOCUG00000008369)	ENSOCUG00000032539	ENSOCUG00000029310	TRAT1 (ENSOCUG00000002916)	ENSOCUG00000026237	DZIP3 (ENSOCUG00000003105)	CIP2A (ENSOCUG00000003095)	ENSOCUG00000031726	ENSOCUG00000006159	ENSOCUG00000024027	ENSOCUG00000001452	IFT57 (ENSOCUG00000003973)	ENSOCUG00000003966	BBX (ENSOCUG00000001686)
Pika	MODERN SPECIES	765														TRPC3 (ENSOPRG00000001246) #20	BBS7 (ENSOPRG00000001202) #21	ENSOPRG00000001183 #22	EXOSC9 (ENSOPRG00000001158) #23