Theria	ANCESTRAL SPECIES	6	ENSGT00390000001301 #7	ENSGT00940000155719.b #9	ENSGT00940000155116.b #10	ENSGT00950000183055.b.a #11	ENSGT00940000157323 #12	ENSGT00390000008458 #13	ENSGT00940000161583 #14	ENSGT00390000008984 #15	ENSGT00940000162309	ENSGT00390000010494 #16	ENSGT00940000156842 #18	ENSGT00640000091487 #19	ENSGT01060000248588.a.c.b #20	ENSGT00390000012346 #21	ENSGT00990000214280	ENSGT00940000155372 #22	ENSGT00950000183130.A #23	ENSGT01010000222815	ENSGT00940000155988 #25	ENSGT01070000253744.a.b #27	ENSGT00510000046908.a.a.b #28	ENSGT00390000007586.a.b #29	ENSGT00940000158340 #30	ENSGT00940000153395.a #32	ENSGT00940000155475 #33	ENSGT00800000124172 #35	ENSGT00940000156337 #37	ENSGT00950000183027.b	ENSGT00950000183054.a.a.a	ENSGT00950000182924.A.b.a.b	ENSGT00550000075003
Eutheria	ANCESTRAL SPECIES	2	ENSGT00390000001301 #7	ENSGT00940000155719.b #9	ENSGT00940000155116.b #10	ENSGT00950000183055.b.a #11	ENSGT00940000157323 #12	ENSGT00390000008458 #13	ENSGT00940000161583 #14	ENSGT00390000008984 #15	ENSGT00940000162309	ENSGT00390000010494 #16	ENSGT00390000003555 #17	ENSGT00940000156842 #18	ENSGT00640000091487 #19	ENSGT01060000248588.a.c.b #20	ENSGT00390000012346 #21	ENSGT00940000155372 #22	ENSGT00950000183130.A #23	ENSGT01010000222815	ENSGT00940000155988 #25	ENSGT01070000253744.a.b #27	ENSGT00510000046908.a.a.b #28	ENSGT00390000007586.a.b #29	ENSGT00940000158340 #30	ENSGT00940000153395.a #32	ENSGT00940000155475 #33	ENSGT00800000124172 #35	ENSGT00530000064570 #36	ENSGT00940000156337 #37	ENSGT00950000183027.b	ENSGT00950000183054.a.a.a	ENSGT00950000182924.A.b.a.b
Boreoeutheria	ANCESTRAL SPECIES	8	ENSGT00390000001301 #7	ENSGT00940000155719.b #9	ENSGT00940000155116.b #10	ENSGT00950000183055.b.a #11	ENSGT00940000157323 #12	ENSGT00390000008458 #13	ENSGT00940000161583 #14	ENSGT00390000008984 #15	ENSGT00940000162309	ENSGT00390000010494 #16	ENSGT00390000003555 #17	ENSGT00940000156842 #18	ENSGT00640000091487 #19	ENSGT01060000248588.a.c.b #20	ENSGT00390000012346 #21	ENSGT00940000155372 #22	ENSGT00950000183130.A #23	ENSGT01010000222815	ENSGT00640000091653 #24	ENSGT00940000155988 #25	ENSGT01070000253744.a.b #27	ENSGT00510000046908.a.a.b #28	ENSGT00390000007586.a.b #29	ENSGT00940000158340 #30	ENSGT00940000153395.a #32	ENSGT00940000155475 #33	ENSGT00800000124172 #35	ENSGT00530000064570 #36	ENSGT00940000156337 #37	ENSGT00950000183027.b	ENSGT00950000183054.a.a.a
Euarchontoglires	ANCESTRAL SPECIES	9	ENSGT00390000001301 #7	ENSGT00940000155719.b #9	ENSGT00940000155116.b #10	ENSGT00950000183055.b.a #11	ENSGT00940000157323 #12	ENSGT00390000008458 #13	ENSGT00940000161583 #14	ENSGT00390000008984 #15	ENSGT00940000162309	ENSGT00390000010494 #16	ENSGT00390000003555 #17	ENSGT00940000156842 #18	ENSGT00640000091487 #19	ENSGT01060000248588.a.c.b #20	ENSGT00390000012346 #21	ENSGT00940000155372 #22	ENSGT00950000183130.A #23	ENSGT01010000222815	ENSGT00640000091653 #24	ENSGT00940000155988 #25	ENSGT01070000253744.a.b #27	ENSGT00510000046908.a.a.b #28	ENSGT00390000007586.a.b #29	ENSGT00940000158340 #30	ENSGT00940000153395.a #32	ENSGT00940000155475 #33	ENSGT00800000124172 #35	ENSGT00530000064570 #36	ENSGT00940000156337 #37	ENSGT00950000183027.b	ENSGT00950000183054.a.a.a
Primates	ANCESTRAL SPECIES	10	ENSGT00390000001301 #7	ENSGT00940000155719.b #9	ENSGT00940000155116.b #10	ENSGT00950000183055.b.a #11	ENSGT00940000157323 #12	ENSGT00390000008458 #13	ENSGT00940000161583 #14	ENSGT00390000008984 #15	ENSGT00940000162309	ENSGT00390000010494 #16	ENSGT00390000003555 #17	ENSGT00940000156842 #18	ENSGT00640000091487 #19	ENSGT01060000248588.a.c.b #20	ENSGT00390000012346 #21	ENSGT00940000155372 #22	ENSGT00950000183130.A #23	ENSGT01010000222815	ENSGT00640000091653 #24	ENSGT00940000155988 #25	ENSGT01070000253744.a.b #27	ENSGT00510000046908.a.a.b #28	ENSGT00390000007586.a.b #29	ENSGT00940000158340 #30	ENSGT00940000153395.a.rb.a #32	ENSGT00940000155475 #33	ENSGT00800000124172 #35	ENSGT00530000064570 #36	ENSGT00940000156337 #37	ENSGT00950000183027.b	ENSGT00950000183054.a.a.a
Haplorrhini	ANCESTRAL SPECIES	20	ENSGT00390000001301 #7	ENSGT00940000155719.b #9	ENSGT00940000155116.b #10	ENSGT00950000183055.b.a #11	ENSGT00940000157323 #12	ENSGT00390000008458 #13	ENSGT00940000161583 #14	ENSGT00390000008984 #15	ENSGT00940000162309	ENSGT00390000010494 #16	ENSGT00390000003555 #17	ENSGT00940000156842 #18	ENSGT00640000091487 #19	ENSGT01060000248588.a.c.b #20	ENSGT00390000012346 #21	ENSGT00940000155372 #22	ENSGT00950000183130.A #23	ENSGT01010000222815	ENSGT00640000091653 #24	ENSGT00940000155988 #25	ENSGT01070000253744.a.b #27	ENSGT00510000046908.a.a.b #28	ENSGT00390000007586.a.b #29	ENSGT00940000158340 #30	ENSGT00940000153395.a.rb.a #32	ENSGT00940000155475 #33	ENSGT00800000124172 #35	ENSGT00530000064570 #36	ENSGT00940000156337 #37	ENSGT00950000183027.b	ENSGT00950000183054.a.a.a
Simiiformes	ANCESTRAL SPECIES	10	ENSGT00390000001301 #7	ENSGT00940000155719.b #9	ENSGT00940000155116.b #10	ENSGT00950000183055.b.a #11	ENSGT00940000157323 #12	ENSGT00390000008458 #13	ENSGT00940000161583 #14	ENSGT00390000008984 #15	ENSGT00940000162309	ENSGT00390000010494 #16	ENSGT00390000003555 #17	ENSGT00940000156842 #18	ENSGT00640000091487 #19	ENSGT01060000248588.a.c.b #20	ENSGT00390000012346 #21	ENSGT00940000155372 #22	ENSGT00950000183130.A #23	ENSGT01010000222815	ENSGT00640000091653 #24	ENSGT00940000155988 #25	ENSGT01070000253744.a.b #27	ENSGT00510000046908.a.a.b #28	ENSGT00390000007586.a.b #29	ENSGT00940000158340 #30	ENSGT00940000153395.a.rb.a #32	ENSGT00940000155475 #33	ENSGT00800000124172 #35	ENSGT00530000064570 #36	ENSGT00940000156337 #37	ENSGT00950000183027.b	ENSGT00950000183054.a.a.a
Catarrhini	ANCESTRAL SPECIES	14	ENSGT00940000155719.b #9	ENSGT00940000155116.b #10	ENSGT00950000183055.b.a #11	ENSGT00940000157323 #12	ENSGT00390000004832.d	ENSGT00390000008458 #13	ENSGT00940000161583 #14	ENSGT00390000008984 #15	ENSGT00940000162309	ENSGT00390000010494 #16	ENSGT00390000003555 #17	ENSGT00940000156842 #18	ENSGT00640000091487 #19	ENSGT01060000248588.a.c.b #20	ENSGT00390000012346 #21	ENSGT00940000155372 #22	ENSGT00950000183130.A #23	ENSGT01010000222815	ENSGT00640000091653 #24	ENSGT00940000155988 #25	ENSGT01070000253744.a.b #27	ENSGT00510000046908.a.a.b #28	ENSGT00390000007586.a.b #29	ENSGT00940000158340 #30	ENSGT00940000153395.a.sb ##32	ENSGT00910000146657	ENSGT00940000155276.x.a.a.b #31	ENSGT00940000153395.a.rb.a #32	ENSGT00940000155475 #33	ENSGT00800000124172 #35	ENSGT00530000064570 #36
Hominoidea	ANCESTRAL SPECIES	10	ENSGT00390000004541.d #8	ENSGT00940000155719.b #9	ENSGT00940000155116.b #10	ENSGT00950000183055.b.a #11	ENSGT00940000157323 #12	ENSGT00390000004832.d	ENSGT00390000008458 #13	ENSGT00940000161583 #14	ENSGT00390000008984 #15	ENSGT00390000010494 #16	ENSGT00390000003555 #17	ENSGT00940000156842 #18	ENSGT00640000091487 #19	ENSGT01060000248588.a.c.b #20	ENSGT00390000012346 #21	ENSGT00940000155372 #22	ENSGT00950000183130.A #23	ENSGT00640000091653 #24	ENSGT00940000155988 #25	ENSGT01070000253744.a.b #27	ENSGT00510000046908.a.a.b #28	ENSGT00390000007586.a.b #29	ENSGT00940000158340 #30	ENSGT00910000146657	ENSGT00940000155276.x.a.a.b #31	ENSGT00940000153395.a.rb.a #32	ENSGT00940000155475 #33	ENSGT00800000124172 #35	ENSGT00530000064570 #36	ENSGT00940000156337 #37	ENSGT00950000183027.b
Hominidae	ANCESTRAL SPECIES	12	ENSGT00390000001301 #7	ENSGT00390000004541.d #8	ENSGT00940000155719.b #9	ENSGT00940000155116.b #10	ENSGT00950000183055.b.a #11	ENSGT00940000157323 #12	ENSGT00390000008458 #13	ENSGT00940000161583 #14	ENSGT00390000008984 #15	ENSGT00390000010494 #16	ENSGT00390000003555 #17	ENSGT00940000156842 #18	ENSGT00640000091487 #19	ENSGT01060000248588.a.c.b #20	ENSGT00390000012346 #21	ENSGT00940000155372 #22	ENSGT00950000183130.A #23	ENSGT00640000091653 #24	ENSGT00940000155988 #25	ENSGT00390000000537.f.b #26	ENSGT01070000253744.a.b #27	ENSGT00510000046908.a.a.b #28	ENSGT00390000007586.a.b #29	ENSGT00940000158340 #30	ENSGT00940000155276.x.a.a.b #31	ENSGT00940000153395.a.rb.a #32	ENSGT00940000155475 #33	ENSGT00800000124172 #35	ENSGT00530000064570 #36	ENSGT00940000156337 #37	ENSGT00950000183027.b
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	11	ENSGT00390000001301 #7	ENSGT00390000004541.d #8	ENSGT00940000155719.b #9	ENSGT00940000155116.b #10	ENSGT00950000183055.b.a #11	ENSGT00940000157323 #12	ENSGT00390000008458 #13	ENSGT00940000161583 #14	ENSGT00390000008984 #15	ENSGT00390000010494 #16	ENSGT00390000003555 #17	ENSGT00940000156842 #18	ENSGT00640000091487 #19	ENSGT01060000248588.a.c.b #20	ENSGT00390000012346 #21	ENSGT00940000155372 #22	ENSGT00950000183130.A #23	ENSGT00640000091653 #24	ENSGT00940000155988 #25	ENSGT00390000000537.f.b #26	ENSGT01070000253744.a.b #27	ENSGT00510000046908.a.a.b #28	ENSGT00390000007586.a.b #29	ENSGT00940000158340 #30	ENSGT00940000155276.x.a.a.b #31	ENSGT00940000153395.a.rb.a #32	ENSGT00940000155475 #33	ENSGT00800000124172 #35	ENSGT00530000064570 #36	ENSGT00940000156337 #37	ENSGT00950000183027.b
Homo/Pan group	ANCESTRAL SPECIES	10	ENSGT00390000001301 #7	ENSGT00390000004541.d #8	ENSGT00940000155719.b #9	ENSGT00940000155116.b #10	ENSGT00950000183055.b.a #11	ENSGT00940000157323 #12	ENSGT00390000008458 #13	ENSGT00940000161583 #14	ENSGT00390000008984 #15	ENSGT00390000010494 #16	ENSGT00390000003555 #17	ENSGT00940000156842 #18	ENSGT00640000091487 #19	ENSGT01060000248588.a.c.b #20	ENSGT00390000012346 #21	ENSGT00940000155372 #22	ENSGT00950000183130.A #23	ENSGT00640000091653 #24	ENSGT00940000155988 #25	ENSGT00390000000537.f.b #26	ENSGT01070000253744.a.b #27	ENSGT00510000046908.a.a.b #28	ENSGT00390000007586.a.b #29	ENSGT00940000158340 #30	ENSGT00940000155276.x.a.a.b #31	ENSGT00940000153395.a.rb.a #32	ENSGT00940000155475 #33	ENSGT00800000124172 #35	ENSGT00530000064570 #36	ENSGT00940000156337 #37	ENSGT00950000183027.b
Pan	ANCESTRAL SPECIES	7	ENSGT00390000001301 #7	ENSGT00390000004541.d #8	ENSGT00940000155719.b #9	ENSGT00940000155116.b #10	ENSGT00950000183055.b.a #11	ENSGT00940000157323 #12	ENSGT00390000008458 #13	ENSGT00940000161583 #14	ENSGT00390000008984 #15	ENSGT00390000010494 #16	ENSGT00390000003555 #17	ENSGT00940000156842 #18	ENSGT00640000091487 #19	ENSGT01060000248588.a.c.b #20	ENSGT00390000012346 #21	ENSGT00940000155372 #22	ENSGT00950000183130.A #23	ENSGT00640000091653 #24	ENSGT00940000155988 #25	ENSGT00390000000537.f.b #26	ENSGT01070000253744.a.b #27	ENSGT00510000046908.a.a.b #28	ENSGT00390000007586.a.b #29	ENSGT00940000158340 #30	ENSGT00940000155276.x.a.a.b #31	ENSGT00940000153395.a.rb.a #32	ENSGT00940000155475 #33	ENSGT00800000124172 #35	ENSGT00530000064570 #36	ENSGT00940000156337 #37	ENSGT00950000183027.b
Chimpanzee	MODERN SPECIES	17	INTU (ENSPTRG00000016431) #7	ENSPTRG00000049120 #8	FAT4 (ENSPTRG00000024046) #9	ANKRD50 (ENSPTRG00000016426) #10	SPRY1 (ENSPTRG00000052327) #11	SPATA5 (ENSPTRG00000016423) #12	NUDT6 (ENSPTRG00000016422) #13	FGF2 (ENSPTRG00000051807) #14	BBS12 (ENSPTRG00000016420) #15	IL21 (ENSPTRG00000016419) #16	IL2 (ENSPTRG00000016418) #17	ADAD1 (ENSPTRG00000016417) #18	KIAA1109 (ENSPTRG00000016416) #19	TRPC3 (ENSPTRG00000016412) #20	BBS7 (ENSPTRG00000016411) #21	CCNA2 (ENSPTRG00000016410) #22	EXOSC9 (ENSPTRG00000044568) #23	TMEM155 (ENSPTRG00000043830) #24	ANXA5 (ENSPTRG00000016407) #25	ENSPTRG00000049306 #26	QRFPR (ENSPTRG00000016406) #27	TNIP3 (ENSPTRG00000016405) #28	NDNF (ENSPTRG00000016404) #29	PRDM5 (ENSPTRG00000016403) #30	ENSPTRG00000049051 #31	MAD2L1 (ENSPTRG00000016401) #32	PDE5A (ENSPTRG00000016400) #33	ENSPTRG00000023546 #34	FABP2 (ENSPTRG00000016399) #35	C4H4orf3 (ENSPTRG00000016398) #36	USP53 (ENSPTRG00000016397) #37
Bonobo	MODERN SPECIES	17	INTU (ENSPPAG00000033240) #7	ENSPPAG00000036190 #8	FAT4 (ENSPPAG00000032760) #9	ANKRD50 (ENSPPAG00000042599) #10	SPRY1 (ENSPPAG00000004316) #11	SPATA5 (ENSPPAG00000043407) #12	NUDT6 (ENSPPAG00000041950) #13	ENSPPAG00000041837 #14	BBS12 (ENSPPAG00000018104) #15	IL21 (ENSPPAG00000037554) #16	IL2 (ENSPPAG00000030452) #17	ADAD1 (ENSPPAG00000028860) #18	BLTP1 (ENSPPAG00000043504) #19	TRPC3 (ENSPPAG00000033334) #20	BBS7 (ENSPPAG00000029739) #21	CCNA2 (ENSPPAG00000039546) #22	EXOSC9 (ENSPPAG00000043865) #23	ENSPPAG00000038482 #24	ANXA5 (ENSPPAG00000030418) #25	ENSPPAG00000041599 #26	QRFPR (ENSPPAG00000039892) #27	ENSPPAG00000014076 #28	NDNF (ENSPPAG00000019574) #29	PRDM5 (ENSPPAG00000043045) #30	ENSPPAG00000043124 #31	MAD2L1 (ENSPPAG00000028274) #32	ENSPPAG00000016397	PDE5A (ENSPPAG00000041127) #33	FABP2 (ENSPPAG00000016227) #35	ENSPPAG00000039685 #36	USP53 (ENSPPAG00000036629) #37
Human	MODERN SPECIES	16	SLC25A31 (ENSG00000151475)	INTU (ENSG00000164066) #7	FAT4 (ENSG00000196159) #9	ANKRD50 (ENSG00000151458) #10	SPRY1 (ENSG00000164056) #11	SPATA5 (ENSG00000145375) #12	NUDT6 (ENSG00000170917) #13	FGF2 (ENSG00000138685) #14	BBS12 (ENSG00000181004) #15	IL21 (ENSG00000138684) #16	IL2 (ENSG00000109471) #17	ADAD1 (ENSG00000164113) #18	BLTP1 (ENSG00000138688) #19	TRPC3 (ENSG00000138741) #20	BBS7 (ENSG00000138686) #21	CCNA2 (ENSG00000145386) #22	EXOSC9 (ENSG00000123737) #23	SMIM43 (ENSG00000164112)	ANXA5 (ENSG00000164111) #25	QRFPR (ENSG00000186867) #27	TNIP3 (ENSG00000050730) #28	NDNF (ENSG00000173376) #29	PRDM5 (ENSG00000138738) #30	MAD2L1 (ENSG00000164109) #32	PDE5A (ENSG00000138735) #33	FABP2 (ENSG00000145384) #35	C4orf3 (ENSG00000164096) #36	USP53 (ENSG00000145390) #37	MYOZ2 (ENSG00000172399)	SYNPO2 (ENSG00000172403)	SEC24D (ENSG00000150961)
Gorilla	MODERN SPECIES	17	INTU (ENSGGOG00000002972) #7	ENSGGOG00000028480 #8	FAT4 (ENSGGOG00000013277) #9	ANKRD50 (ENSGGOG00000011583) #10	SPRY1 (ENSGGOG00000043018) #11	SPATA5 (ENSGGOG00000000590) #12	NUDT6 (ENSGGOG00000023860) #13	ENSGGOG00000039455 #14	BBS12 (ENSGGOG00000024815) #15	IL21 (ENSGGOG00000008002) #16	IL2 (ENSGGOG00000023337) #17	ADAD1 (ENSGGOG00000004388) #18	BLTP1 (ENSGGOG00000009991) #19	TRPC3 (ENSGGOG00000004558) #20	BBS7 (ENSGGOG00000002169) #21	CCNA2 (ENSGGOG00000002166) #22	EXOSC9 (ENSGGOG00000028227) #23	TMEM155 (ENSGGOG00000039647) #24	ANXA5 (ENSGGOG00000016680) #25	ENSGGOG00000022210 #26	QRFPR (ENSGGOG00000008131) #27	ENSGGOG00000012377 #28	NDNF (ENSGGOG00000008613) #29	PRDM5 (ENSGGOG00000013562) #30	ENSGGOG00000016645 #31	MAD2L1 (ENSGGOG00000002516) #32	PDE5A (ENSGGOG00000013689) #33	FABP2 (ENSGGOG00000027841) #35	C4orf3 (ENSGGOG00000006489) #36	USP53 (ENSGGOG00000006480) #37	MYOZ2 (ENSGGOG00000010448)
Orangutan	MODERN SPECIES	17	INTU (ENSPPYG00000015054) #7	FAT4 (ENSPPYG00000015053) #9	ANKRD50 (ENSPPYG00000015050) #10	ENSPPYG00000030312	SPRY1 (ENSPPYG00000015049) #11	SPATA5 (ENSPPYG00000015048) #12	NUDT6 (ENSPPYG00000015047) #13	ENSPPYG00000015046 #14	BBS12 (ENSPPYG00000015045) #15	IL21 (ENSPPYG00000015044) #16	IL2 (ENSPPYG00000015043) #17	ADAD1 (ENSPPYG00000015042) #18	BLTP1 (ENSPPYG00000015041) #19	TRPC3 (ENSPPYG00000015040) #20	BBS7 (ENSPPYG00000015039) #21	CCNA2 (ENSPPYG00000015038) #22	EXOSC9 (ENSPPYG00000015037) #23	SMIM43 (ENSPPYG00000015036) #24	ANXA5 (ENSPPYG00000015035) #25	ENSPPYG00000040499 #26	QRFPR (ENSPPYG00000015034) #27	ENSPPYG00000015033 #28	NDNF (ENSPPYG00000015032) #29	PRDM5 (ENSPPYG00000015031) #30	MAD2L1 (ENSPPYG00000015029) #32	PDE5A (ENSPPYG00000015028) #33	FABP2 (ENSPPYG00000015027) #35	C4H4orf3 (ENSPPYG00000034080) #36	USP53 (ENSPPYG00000015025) #37	MYOZ2 (ENSPPYG00000015023)	SYNPO2 (ENSPPYG00000015022)
Gibbon	MODERN SPECIES	22	ENSNLEG00000008841	FAT4 (ENSNLEG00000009479) #9	ANKRD50 (ENSNLEG00000009475) #10	SPRY1 (ENSNLEG00000029914) #11	SPATA5 (ENSNLEG00000009470) #12	ENSNLEG00000031943	NUDT6 (ENSNLEG00000032258) #13	ENSNLEG00000032378 #14	BBS12 (ENSNLEG00000018253) #15	IL21 (ENSNLEG00000009448) #16	IL2 (ENSNLEG00000009439) #17	ADAD1 (ENSNLEG00000009415) #18	BLTP1 (ENSNLEG00000009385) #19	TRPC3 (ENSNLEG00000009366) #20	BBS7 (ENSNLEG00000009344) #21	CCNA2 (ENSNLEG00000009333) #22	EXOSC9 (ENSNLEG00000009300) #23	ENSNLEG00000009291 #24	ANXA5 (ENSNLEG00000009177) #25	QRFPR (ENSNLEG00000031181) #27	ENSNLEG00000031186 #26	ENSNLEG00000009139 #28	NDNF (ENSNLEG00000029039) #29	PRDM5 (ENSNLEG00000009107) #30	ENSNLEG00000030321 #31	ENSNLEG00000034205	ENSNLEG00000009092 ##32	PDE5A (ENSNLEG00000009039) #33	FABP2 (ENSNLEG00000009034) #35	ENSNLEG00000028084 #36	USP53 (ENSNLEG00000009014) #37
Cercopithecidae	ANCESTRAL SPECIES	10	ENSGT00940000155719.b #9	ENSGT00940000155116.b #10	ENSGT00950000183055.b.a #11	ENSGT00940000157323 #12	ENSGT00390000004832.d	ENSGT00390000008458 #13	ENSGT00940000161583 #14	ENSGT00390000008984 #15	ENSGT00940000162309	ENSGT00390000010494 #16	ENSGT00390000003555 #17	ENSGT00940000156842 #18	ENSGT00640000091487 #19	ENSGT01060000248588.a.c.b #20	ENSGT00390000012346 #21	ENSGT00940000155372 #22	ENSGT00950000183130.A #23	ENSGT01010000222815	ENSGT00640000091653 #24	ENSGT00940000155988 #25	ENSGT01070000253744.a.b #27	ENSGT00510000046908.a.a.b #28	ENSGT00390000007586.a.b #29	ENSGT00940000158340 #30	ENSGT00940000153395.a.sb ##32	ENSGT00940000155276.x.a.a.b #31	ENSGT00940000153395.a.rb.a #32	ENSGT00940000155475 #33	ENSGT00800000124172 #35	ENSGT00530000064570.c #36	ENSGT00940000156337 #37
Cercopithecinae	ANCESTRAL SPECIES	14	ENSGT00940000155719.b #9	ENSGT00940000155116.b #10	ENSGT00950000183055.b.a #11	ENSGT00940000157323 #12	ENSGT00390000004832.d	ENSGT00390000008458 #13	ENSGT00940000161583 #14	ENSGT00390000008984 #15	ENSGT00940000162309	ENSGT00390000010494 #16	ENSGT00390000003555 #17	ENSGT00940000156842 #18	ENSGT00640000091487 #19	ENSGT01060000248588.a.c.b #20	ENSGT00390000012346 #21	ENSGT00940000155372 #22	ENSGT00950000183130.A #23	ENSGT01010000222815	ENSGT00640000091653 #24	ENSGT00940000155988 #25	ENSGT01070000253744.a.b #27	ENSGT00510000046908.a.a.b #28	ENSGT00390000007586.a.b #29	ENSGT00940000158340 #30	ENSGT00940000153395.a.sb ##32	ENSGT00940000155276.x.a.a.b #31	ENSGT00940000153395.a.rb.a #32	ENSGT00940000155475 #33	ENSGT00800000124172 #35	ENSGT00530000064570.c #36	ENSGT00940000156337 #37
Cercopithecinae_a	ANCESTRAL SPECIES	13	ENSGT00940000155116.b #10	ENSGT00950000183055.b.a #11	ENSGT00940000157323 #12	ENSGT00390000004832.d	ENSGT00390000008458 #13	ENSGT00940000161583 #14	ENSGT00390000008984 #15	ENSGT00940000162309	ENSGT00390000010494 #16	ENSGT00390000003555 #17	ENSGT00940000156842 #18	ENSGT00640000091487 #19	ENSGT00440000038181.eb.a.a.a	ENSGT01060000248588.a.c.b #20	ENSGT00390000012346 #21	ENSGT00940000155372 #22	ENSGT00950000183130.A #23	ENSGT01010000222815	ENSGT00640000091653 #24	ENSGT00940000155988 #25	ENSGT01070000253744.a.b #27	ENSGT00510000046908.a.a.b #28	ENSGT00390000007586.a.b #29	ENSGT00940000158340 #30	ENSGT00940000155276.x.a.a.b #31	ENSGT00940000153395.a.rb.a #32	ENSGT00940000153395.a.sb ##32	ENSGT00940000155475 #33	ENSGT00800000124172 #35	ENSGT00530000064570.c #36	ENSGT00940000156337 #37
Macaca	ANCESTRAL SPECIES	18	ENSGT00940000155719.b #9	ENSGT00940000155116.b #10	ENSGT00950000183055.b.a #11	ENSGT00940000157323 #12	ENSGT00390000004832.d	ENSGT00390000008458 #13	ENSGT00940000161583 #14	ENSGT00940000162309	ENSGT00390000010494 #16	ENSGT00390000003555 #17	ENSGT00940000156842 #18	ENSGT00640000091487 #19	ENSGT00440000038181.eb.a.a.a	ENSGT01060000248588.a.c.b #20	ENSGT00390000012346 #21	ENSGT00940000155372 #22	ENSGT00950000183130.A #23	ENSGT00640000091653 #24	ENSGT00940000155988 #25	ENSGT01070000253744.a.b #27	ENSGT00510000046908.a.a.b #28	ENSGT00390000007586.a.b #29	ENSGT00940000158340 #30	ENSGT00940000155276.x.a.a.b #31	ENSGT00940000153395.a.sb ##32	ENSGT00940000155475 #33	ENSGT00800000124172 #35	ENSGT00530000064570.c #36	ENSGT00940000156337 #37	ENSGT00950000183027.b	ENSGT00950000183054.a.a.a
Pig-tailed macaque	MODERN SPECIES	126	FAT4 (ENSMNEG00000033548) #9	ANKRD50 (ENSMNEG00000039652) #10	ENSMNEG00000020477	SPRY1 (ENSMNEG00000020254) #11	SPATA5 (ENSMNEG00000044789) #12	ENSMNEG00000012758	NUDT6 (ENSMNEG00000044523) #13	ENSMNEG00000045396 #14	ENSMNEG00000031358	IL21 (ENSMNEG00000030916) #16	IL2 (ENSMNEG00000000320) #17	ADAD1 (ENSMNEG00000032586) #18	BLTP1 (ENSMNEG00000043520) #19	TRPC3 (ENSMNEG00000029603) #20	BBS7 (ENSMNEG00000031834) #21	CCNA2 (ENSMNEG00000012584) #22	EXOSC9 (ENSMNEG00000029445) #23	ENSMNEG00000035605 #24	ANXA5 (ENSMNEG00000035224) #25	QRFPR (ENSMNEG00000041533) #27	TNIP3 (ENSMNEG00000045024) #28	NDNF (ENSMNEG00000043596) #29	PRDM5 (ENSMNEG00000019018) #30	ENSMNEG00000025951 #31	MAD2L1 (ENSMNEG00000040691) ##32	PDE5A (ENSMNEG00000016569) #33	FABP2 (ENSMNEG00000036803) #35	ENSMNEG00000030057 #36	USP53 (ENSMNEG00000035179) #37	MYOZ2 (ENSMNEG00000021579)	SYNPO2 (ENSMNEG00000030337)
Macaca_a	ANCESTRAL SPECIES	12	ENSGT00390000001301 #7	ENSGT00940000155719.b #9	ENSGT00940000155116.b #10	ENSGT00950000183055.b.a #11	ENSGT00940000157323 #12	ENSGT00390000008458 #13	ENSGT00940000161583 #14	ENSGT00390000010494 #16	ENSGT00390000003555 #17	ENSGT00940000156842 #18	ENSGT00640000091487 #19	ENSGT00440000038181.eb.a.a.a	ENSGT01060000248588.a.c.b #20	ENSGT01100000263509.a.a.b.a.a.a	ENSGT00390000012346 #21	ENSGT00940000155372 #22	ENSGT00950000183130.A #23	ENSGT00640000091653 #24	ENSGT00940000155988 #25	ENSGT01070000253744.a.b #27	ENSGT00510000046908.a.a.b #28	ENSGT00390000007586.a.b #29	ENSGT00940000158340 #30	ENSGT00940000155276.x.a.a.b #31	ENSGT00940000153395.a.sb ##32	ENSGT00940000153395.a.rb.a #32	ENSGT00940000155475 #33	ENSGT00800000124172 #35	ENSGT00940000156337 #37	ENSGT01100000263508.A.d.e.b.a.c.b.c.a.b.a.a.a.a	ENSGT00950000183027.b
Crab-eating macaque	MODERN SPECIES	15	ANKRD50 (ENSMFAG00000001438) #10	ENSMFAG00000057905	ENSMFAG00000027320	SPRY1 (ENSMFAG00000006273) #11	SPATA5 (ENSMFAG00000043145) #12	NUDT6 (ENSMFAG00000044387) #13	FGF2 (ENSMFAG00000001237) #14	IL21 (ENSMFAG00000047192) #16	IL2 (ENSMFAG00000035827) #17	ADAD1 (ENSMFAG00000003813) #18	BLTP1 (ENSMFAG00000030541) #19	ENSMFAG00000060540	TRPC3 (ENSMFAG00000000600) #20	ENSMFAG00000016983	BBS7 (ENSMFAG00000042678) #21	CCNA2 (ENSMFAG00000037740) #22	EXOSC9 (ENSMFAG00000038292) #23	ENSMFAG00000039159 #24	ANXA5 (ENSMFAG00000045853) #25	ENSMFAG00000064396	ENSMFAG00000063921	ENSMFAG00000056704	QRFPR (ENSMFAG00000039454) #27	TNIP3 (ENSMFAG00000044869) #28	NDNF (ENSMFAG00000003473) #29	ENSMFAG00000065496	PRDM5 (ENSMFAG00000045845) #30	ENSMFAG00000040479 #31	ENSMFAG00000043866 ##32	PDE5A (ENSMFAG00000041058) #33	FABP2 (ENSMFAG00000038050) #35
Rhesus	MODERN SPECIES	15	FAT4 (ENSMMUG00000011810) #9	ANKRD50 (ENSMMUG00000006783) #10	SPRY1 (ENSMMUG00000001848) #11	SPATA5 (ENSMMUG00000007422) #12	NUDT6 (ENSMMUG00000007420) #13	FGF2 (ENSMMUG00000007419) #14	IL21 (ENSMMUG00000049383) #16	IL2 (ENSMMUG00000021093) #17	ADAD1 (ENSMMUG00000004572) #18	ENSMMUG00000059781	KIAA1109 (ENSMMUG00000004571) #19	ENSMMUG00000037703	TRPC3 (ENSMMUG00000009820) #20	ENSMMUG00000062510	BBS7 (ENSMMUG00000009819) #21	CCNA2 (ENSMMUG00000009817) #22	EXOSC9 (ENSMMUG00000009816) #23	TMEM155 (ENSMMUG00000001752) #24	ANXA5 (ENSMMUG00000009194) #25	QRFPR (ENSMMUG00000050565) #27	TNIP3 (ENSMMUG00000004415) #28	NDNF (ENSMMUG00000013989) #29	PRDM5 (ENSMMUG00000003249) #30	ENSMMUG00000062519	MAD2L1 (ENSMMUG00000054168) #32	PDE5A (ENSMMUG00000007305) #33	FABP2 (ENSMMUG00000061216) #35	USP53 (ENSMMUG00000008705) #37	ENSMMUG00000054494	MYOZ2 (ENSMMUG00000008703)	SYNPO2 (ENSMMUG00000008702)
Cercopithecinae_b	ANCESTRAL SPECIES	6	ENSGT00940000155116.b #10	ENSGT00950000183055.b.a #11	ENSGT00940000157323 #12	ENSGT00390000004832.d	ENSGT00390000008458 #13	ENSGT00940000161583 #14	ENSGT00390000008984 #15	ENSGT00940000162309	ENSGT00390000010494 #16	ENSGT00390000003555 #17	ENSGT00940000156842 #18	ENSGT00640000091487 #19	ENSGT00440000038181.eb.a.a.a	ENSGT01060000248588.a.c.b #20	ENSGT00390000012346 #21	ENSGT00940000155372 #22	ENSGT00950000183130.A #23	ENSGT01010000222815	ENSGT00640000091653 #24	ENSGT00940000155988 #25	ENSGT01070000253744.a.b #27	ENSGT00510000046908.a.a.b #28	ENSGT00390000007586.a.b #29	ENSGT00940000158340 #30	ENSGT00940000155276.x.a.a.b #31	ENSGT00940000153395.a.rb.a #32	ENSGT00940000153395.a.rb.b.a ##32	ENSGT00940000155475 #33	ENSGT00800000124172 #35	ENSGT00530000064570.c #36	ENSGT00940000156337 #37
Cercopithecinae_d	ANCESTRAL SPECIES	62													ENSGT00640000091487 #19	ENSGT01060000248588.a.c.b #20	ENSGT00390000012346 #21	ENSGT00940000155372 #22	ENSGT00950000183130.A #23	ENSGT00640000091653 #24	ENSGT00940000155988 #25	ENSGT01070000253744.a.b #27	ENSGT00510000046908.a.a.b #28	ENSGT00390000007586.a.b #29	ENSGT00940000158340 #30	ENSGT00940000155276.x.a.a.b #31	ENSGT00940000153395.a.sb ##32	ENSGT00940000153395.a.rb.b.a ##32	ENSGT00940000155475 #33	ENSGT00800000124172 #35	ENSGT00530000064570.c #36	ENSGT00940000156337 #37	ENSGT00950000183027.b
Drill	MODERN SPECIES	1218	IL6ST (ENSMLEG00000034857)	IL31RA (ENSMLEG00000026602)	ENSMLEG00000027448	DDX4 (ENSMLEG00000038233)	ENSMLEG00000039509	SLC38A9 (ENSMLEG00000034584)	PLPP1 (ENSMLEG00000029478)	ENSMLEG00000024622	MTREX (ENSMLEG00000041051)	DHX29 (ENSMLEG00000032837)	CCNO (ENSMLEG00000036886)	MCIDAS (ENSMLEG00000033943)	GPX8 (ENSMLEG00000034464)	CDC20B (ENSMLEG00000038674)	GZMA (ENSMLEG00000040793)	CCNA2 (ENSMLEG00000041387) #22	EXOSC9 (ENSMLEG00000042316) #23	ENSMLEG00000036961 #24	ANXA5 (ENSMLEG00000001710) #25	ENSMLEG00000000209	QRFPR (ENSMLEG00000034740) #27	TNIP3 (ENSMLEG00000029119) #28	NDNF (ENSMLEG00000040140) #29	PRDM5 (ENSMLEG00000023145) #30
Sooty mangabey	MODERN SPECIES	348													BLTP1 (ENSCATG00000025446) #19	TRPC3 (ENSCATG00000044900) #20	BBS7 (ENSCATG00000025713) #21	CCNA2 (ENSCATG00000029547) #22	EXOSC9 (ENSCATG00000044273) #23	ENSCATG00000040714 #24	ENSCATG00000038631	ANXA5 (ENSCATG00000038376) #25	ENSCATG00000031240 ##26	QRFPR (ENSCATG00000041017) #27	TNIP3 (ENSCATG00000043498) #28	NDNF (ENSCATG00000031227) #29	PRDM5 (ENSCATG00000042510) #30	ENSCATG00000009459 #31	ENSCATG00000040684 ##32	ENSCATG00000039250	ENSCATG00000044697	PDE5A (ENSCATG00000030892) #33	FABP2 (ENSCATG00000029827) #35
Olive baboon	MODERN SPECIES	13	ENSPANG00000047256	SPRY1 (ENSPANG00000000270) #11	SPATA5 (ENSPANG00000025628) #12	NUDT6 (ENSPANG00000009004) #13	FGF2 (ENSPANG00000022787) #14	BBS12 (ENSPANG00000040865) #15	ENSPANG00000042238	IL21 (ENSPANG00000050221) #16	ADAD1 (ENSPANG00000005749) #18	ENSPANG00000045342	IL2 (ENSPANG00000008900) #17	BLTP1 (ENSPANG00000025669) #19	ENSPANG00000042785	TRPC3 (ENSPANG00000006913) #20	BBS7 (ENSPANG00000005724) #21	CCNA2 (ENSPANG00000008601) #22	EXOSC9 (ENSPANG00000000792) #23	SMIM43 (ENSPANG00000043689)	ENSPANG00000038330 #24	ENSPANG00000045565	ENSPANG00000033569	ENSPANG00000030816	ENSPANG00000042448	ENSPANG00000038953	ANXA5 (ENSPANG00000011025) #25	ENSPANG00000048379	QRFPR (ENSPANG00000039070) #27	TNIP3 (ENSPANG00000008756) #28	ENSPANG00000038766	NDNF (ENSPANG00000040917) #29	ENSPANG00000011906
Vervet Monkey	MODERN SPECIES	26	FAT4 (ENSCSAG00000003634) #9	ANKRD50 (ENSCSAG00000003637) #10	ENSCSAG00000000392	SPRY1 (ENSCSAG00000000393) #11	ENSCSAG00000003641 #12	ENSCSAG00000003645 #12	NUDT6 (ENSCSAG00000003654) #13	FGF2 (ENSCSAG00000003659) #14	BBS12 (ENSCSAG00000000394) #15	IL21 (ENSCSAG00000003662) #16	IL2 (ENSCSAG00000003667) #17	ADAD1 (ENSCSAG00000003673) #18	BLTP1 (ENSCSAG00000003688) #19	TRPC3 (ENSCSAG00000003692) #20	BBS7 (ENSCSAG00000003698) #21	CCNA2 (ENSCSAG00000003701) #22	EXOSC9 (ENSCSAG00000003705) #23	ENSCSAG00000003708 #24	ANXA5 (ENSCSAG00000003714) #25	ENSCSAG00000003716	QRFPR (ENSCSAG00000003717) #27	TNIP3 (ENSCSAG00000003720) #28	NDNF (ENSCSAG00000003726) #29	PRDM5 (ENSCSAG00000003729) #30	ENSCSAG00000003731 ##32	PDE5A (ENSCSAG00000003739) #33	FABP2 (ENSCSAG00000003744) #35	ENSCSAG00000003745 #36	USP53 (ENSCSAG00000003748) #37	ENSCSAG00000003749	MYOZ2 (ENSCSAG00000003751)
Rhinopithecus	ANCESTRAL SPECIES	286		ENSGT00940000153352.B.a	ENSGT00940000155116.b #10	ENSGT00950000183055.b.a #11	ENSGT00940000157323 #12	ENSGT00390000008458 #13	ENSGT00940000161583 #14	ENSGT00390000008984 #15	ENSGT00940000162309	ENSGT00390000010494 #16	ENSGT00390000003555 #17	ENSGT00940000156842 #18	ENSGT00640000091487 #19	ENSGT01060000248588.a.c.b #20	ENSGT00390000012346 #21	ENSGT00940000155372 #22	ENSGT00950000183130.A #23	ENSGT00640000091653 #24	ENSGT00940000155988 #25	ENSGT01070000253744.a.b #27
Black snub-nosed monkey	MODERN SPECIES	1574			ENSRBIG00000032452	ANKRD50 (ENSRBIG00000035728) #10	SPRY1 (ENSRBIG00000000502) #11	SPATA5 (ENSRBIG00000032875) #12	NUDT6 (ENSRBIG00000030353) #13	FGF2 (ENSRBIG00000039224) #14	BBS12 (ENSRBIG00000030808) #15	IL21 (ENSRBIG00000044074) #16	IL2 (ENSRBIG00000042759) #17	ADAD1 (ENSRBIG00000027881) #18	BLTP1 (ENSRBIG00000041049) #19	TRPC3 (ENSRBIG00000039665) #20	BBS7 (ENSRBIG00000006781) #21	CCNA2 (ENSRBIG00000041921) #22	EXOSC9 (ENSRBIG00000030341) #23	ENSRBIG00000034376	ENSRBIG00000026878 #24	ANXA5 (ENSRBIG00000041395) #25
Golden snub-nosed monkey	MODERN SPECIES	1029												ADAD1 (ENSRROG00000039189) #18	BLTP1 (ENSRROG00000030311) #19	TRPC3 (ENSRROG00000039243) #20	BBS7 (ENSRROG00000013317) #21	CCNA2 (ENSRROG00000035964) #22	EXOSC9 (ENSRROG00000040804) #23	ENSRROG00000042787 #24	ENSRROG00000032027 #25	QRFPR (ENSRROG00000031674) #27
Platyrrhini	ANCESTRAL SPECIES	5	ENSGT00940000160648	ENSGT00390000001301 #7	ENSGT00940000155719.b #9	ENSGT00940000155116.b #10	ENSGT00950000183055.b.a #11	ENSGT00940000157323 #12	ENSGT00390000008458 #13	ENSGT00940000161583 #14	ENSGT00390000008984 #15	ENSGT00390000010494 #16	ENSGT00390000003555 #17	ENSGT00940000156842.l #18	ENSGT00640000091487 #19	ENSGT01060000248588.a.c.b #20	ENSGT00390000012346 #21	ENSGT00940000155372 #22	ENSGT00950000183130.A #23	ENSGT00640000091653 #24	ENSGT00940000155988 #25	ENSGT01070000253744.a.b #27	ENSGT00510000046908.a.a.b #28	ENSGT00390000007586.a.b #29	ENSGT00940000158340 #30	ENSGT00940000153395.a.rb.a #32	ENSGT00940000155475 #33	ENSGT00800000124172.c #35	ENSGT00800000124172.d #35	ENSGT00530000064570 #36	ENSGT00940000156337 #37	ENSGT00950000183027.b	ENSGT00950000183054.a.a.a
Mas night monkey	DUPLICATION
Mas night monkey	MODERN SPECIES	1054	SLC25A31 (ENSANAG00000029731)	INTU (ENSANAG00000030077) #7	FAT4 (ENSANAG00000032727) #9	ANKRD50 (ENSANAG00000035078) #10	ENSANAG00000038143	SPRY1 (ENSANAG00000019703) #11	SPATA5 (ENSANAG00000024588) #12	NUDT6 (ENSANAG00000014690) #13	FGF2 (ENSANAG00000037733) #14	IL21 (ENSANAG00000033883) #16	IL2 (ENSANAG00000026729) #17	ENSANAG00000034045 #18	BLTP1 (ENSANAG00000034336) #19	TRPC3 (ENSANAG00000032754) #20	BBS7 (ENSANAG00000037930) #21	ENSANAG00000029372 #22	EXOSC9 (ENSANAG00000024817) #23	ENSANAG00000027799 #24	ANXA5 (ENSANAG00000019060) #25	ENSANAG00000037751	QRFPR (ENSANAG00000036183) #27	TNIP3 (ENSANAG00000021165) #28	NDNF (ENSANAG00000021660) #29	PRDM5 (ENSANAG00000027411) #30	MAD2L1 (ENSANAG00000022503) #32	PDE5A (ENSANAG00000036136) #33	ENSANAG00000036422 #35	ENSANAG00000003057 #35	C4orf3 (ENSANAG00000034334) #36	USP53 (ENSANAG00000037495) #37	MYOZ2 (ENSANAG00000035756)
Mas night monkey	MODERN SPECIES	446														ENSANAG00000033602	ENSANAG00000035603	ENSANAG00000019547 #22	ENSANAG00000025961	ENSANAG00000029772	NANOGNB (ENSANAG00000031517)	DPPA3 (ENSANAG00000028453)	GDF3 (ENSANAG00000023971)	APOBEC1 (ENSANAG00000027743)	ENSANAG00000019248	ENSANAG00000028978	ENSANAG00000001909	ENSANAG00000033982	ENSANAG00000030301	ENSANAG00000021598	ENSANAG00000030757	ENSANAG00000028357	ENSANAG00000031265
Cebidae	ANCESTRAL SPECIES	4	ENSGT00940000160648	ENSGT00390000001301 #7	ENSGT00940000155719.b #9	ENSGT00940000155116.b #10	ENSGT00950000183055.b.a #11	ENSGT00940000157323 #12	ENSGT00390000008458 #13	ENSGT00940000161583 #14	ENSGT00390000008984 #15	ENSGT00390000010494 #16	ENSGT00390000003555 #17	ENSGT00940000156842.k #18	ENSGT00640000091487 #19	ENSGT01060000248588.a.c.b #20	ENSGT00390000012346 #21	ENSGT00940000155372 #22	ENSGT00950000183130.A #23	ENSGT00640000091653 #24	ENSGT00940000155988 #25	ENSGT01070000253744.a.b #27	ENSGT00510000046908.a.a.b #28	ENSGT00390000007586.a.b #29	ENSGT00940000158340 #30	ENSGT00910000146657	ENSGT00940000153395.a.rb.b ##32	ENSGT00940000155475 #33	ENSGT00800000124172.c #35	ENSGT00800000124172.d #35	ENSGT00530000064570 #36	ENSGT00940000156337 #37	ENSGT00950000183027.b
Cebidae_a	ANCESTRAL SPECIES	21					ENSGT00940000155116.b #10	ENSGT00950000183055.b.a #11	ENSGT00940000157323 #12	ENSGT00390000008458 #13	ENSGT00940000161583 #14	ENSGT00390000010494 #16	ENSGT00390000003555 #17	ENSGT00940000156842.k #18	ENSGT00640000091487 #19	ENSGT01060000248588.a.c.b #20	ENSGT00390000012346 #21	ENSGT00940000155372 #22	ENSGT00950000183130.A #23	ENSGT00640000091653 #24	ENSGT00940000155988 #25	ENSGT01070000253744.a.b #27	ENSGT00510000046908.a.a.b #28	ENSGT00390000007586.a.b #29	ENSGT00940000158340 #30	ENSGT00910000146657	ENSGT00940000153395.a.rb.b ##32	ENSGT00940000155475 #33	ENSGT00800000124172.c #35	ENSGT00800000124172.d #35	ENSGT00530000064570 #36	ENSGT00940000156337 #37	ENSGT00950000183027.b
Bolivian squirrel monkey	MODERN SPECIES	124					ANKRD50 (ENSSBOG00000023636) #10	SPRY1 (ENSSBOG00000019309) #11	SPATA5 (ENSSBOG00000026689) #12	NUDT6 (ENSSBOG00000033311) #13	FGF2 (ENSSBOG00000030614) #14	IL21 (ENSSBOG00000030721) #16	IL2 (ENSSBOG00000025464) #17	ADAD1 (ENSSBOG00000027476) #18	BLTP1 (ENSSBOG00000027364) #19	TRPC3 (ENSSBOG00000035978) #20	BBS7 (ENSSBOG00000035432) #21	CCNA2 (ENSSBOG00000032488) #22	EXOSC9 (ENSSBOG00000020744) #23	ENSSBOG00000024682 #24	ANXA5 (ENSSBOG00000027347) #25	QRFPR (ENSSBOG00000023041) #27	TNIP3 (ENSSBOG00000020348) #28	NDNF (ENSSBOG00000026987) #29	PRDM5 (ENSSBOG00000022100) #30	ENSSBOG00000029028	ENSSBOG00000028776	C1QTNF3 (ENSSBOG00000023840)	AMACR (ENSSBOG00000022442)	SLC45A2 (ENSSBOG00000028257)	ADAMTS12 (ENSSBOG00000030909)	TARS1 (ENSSBOG00000021854)	NPR3 (ENSSBOG00000025013)
Capuchin	MODERN SPECIES	233										ENSCCAG00000031551	ENSCCAG00000030951	ENSCCAG00000027741	CCSER2 (ENSCCAG00000025424)	TRPC3 (ENSCCAG00000026199) #20	BBS7 (ENSCCAG00000035113) #21	CCNA2 (ENSCCAG00000035284) #22	EXOSC9 (ENSCCAG00000030677) #23	ENSCCAG00000028108 #24	ANXA5 (ENSCCAG00000032773) #25	QRFPR (ENSCCAG00000027760) #27	TNIP3 (ENSCCAG00000026099) #28	NDNF (ENSCCAG00000021301) #29	PRDM5 (ENSCCAG00000023157) #30	ENSCCAG00000037214	MAD2L1 (ENSCCAG00000030445) #32	PDE5A (ENSCCAG00000036352) #33	ENSCCAG00000012470 #35	ENSCCAG00000030693 #35	ENSCCAG00000037219	ENSCCAG00000038103 #36	USP53 (ENSCCAG00000032146) #37
Marmoset	MODERN SPECIES	15	ENSCJAG00000043387	ANKRD50 (ENSCJAG00000003581) #10	SPRY1 (ENSCJAG00000021817) #11	SPATA5 (ENSCJAG00000004346) #12	ENSCJAG00000070589	ENSCJAG00000081404	NUDT6 (ENSCJAG00000002741) #13	ENSCJAG00000002744 #14	BBS12 (ENSCJAG00000002751) #15	IL21 (ENSCJAG00000002755) #16	IL2 (ENSCJAG00000041260) #17	ADAD1 (ENSCJAG00000002796) #18	BLTP1 (ENSCJAG00000002804) #19	TRPC3 (ENSCJAG00000002975) #20	BBS7 (ENSCJAG00000003015) #21	CCNA2 (ENSCJAG00000003023) #22	EXOSC9 (ENSCJAG00000003038) #23	ENSCJAG00000043047 #24	ANXA5 (ENSCJAG00000003072) #25	QRFPR (ENSCJAG00000003105) #27	TNIP3 (ENSCJAG00000003110) #28	NDNF (ENSCJAG00000003128) #29	PRDM5 (ENSCJAG00000003133) #30	ENSCJAG00000064341	MAD2L1 (ENSCJAG00000003156) ##32	ENSCJAG00000068921	PDE5A (ENSCJAG00000003176) #33	ENSCJAG00000081825	FABP2 (ENSCJAG00000003228) #35	ENSCJAG00000045160 #36	USP53 (ENSCJAG00000003234) #37
Tarsier	MODERN SPECIES	6202									IL21 (ENSTSYG00000002228) #16	IL2 (ENSTSYG00000029960) #17	ADAD1 (ENSTSYG00000008859) #18	BLTP1 (ENSTSYG00000010806) #19	ENSTSYG00000037220	TRPC3 (ENSTSYG00000013045) #20	BBS7 (ENSTSYG00000002690) #21	CCNA2 (ENSTSYG00000002684) #22	EXOSC9 (ENSTSYG00000002664) #23	ENSTSYG00000034999 #24	ANXA5 (ENSTSYG00000006323) #25
Strepsirrhini	ANCESTRAL SPECIES	32	ENSGT00390000001301 #7	ENSGT00940000155719.b #9	ENSGT00940000155116.b #10	ENSGT00950000183055.b.a #11	ENSGT00940000157323 #12	ENSGT00390000008458 #13	ENSGT00940000161583 #14	ENSGT00390000008984 #15	ENSGT00940000162309	ENSGT00390000010494 #16	ENSGT00390000003555 #17	ENSGT00940000156842 #18	ENSGT00640000091487 #19	ENSGT01060000248588.a.c.b #20	ENSGT00390000012346 #21	ENSGT00940000155372 #22	ENSGT00950000183130.A #23	ENSGT01010000222815	ENSGT00640000091653 #24	ENSGT00940000155988 #25
Lemuriformes	ANCESTRAL SPECIES	38	ENSGT00390000001301 #7	ENSGT00940000155719.b #9	ENSGT00940000155116.b #10	ENSGT00950000183055.b.a #11	ENSGT00940000157323 #12	ENSGT00390000008458 #13	ENSGT00940000161583 #14	ENSGT00390000008984 #15	ENSGT00940000162309	ENSGT00390000010494 #16	ENSGT00390000003555 #17	ENSGT00940000156842 #18	ENSGT00640000091487 #19	ENSGT01060000248588.a.c.b #20	ENSGT00390000012346 #21	ENSGT00940000155372 #22	ENSGT00950000183130.A #23	ENSGT01010000222815	ENSGT00640000091653 #24	ENSGT00940000155988 #25	ENSGT00390000004552.d	ENSGT00940000154582	ENSGT00940000162029	ENSGT00940000163257	ENSGT00940000157733	ENSGT00940000160321.d	ENSGT00940000158569	ENSGT00940000161669	ENSGT00940000157278	ENSGT00530000063727.B	ENSGT00940000159678
Mouse lemur	MODERN SPECIES	5	ANKRD50 (ENSMICG00000014015) #10	ENSMICG00000038297	SPRY1 (ENSMICG00000043333) #11	SPATA5 (ENSMICG00000010729) #12	ENSMICG00000028770	NUDT6 (ENSMICG00000045450) #13	ENSMICG00000048112 #14	ENSMICG00000038024	IL21 (ENSMICG00000005315) #16	ENSMICG00000027821	IL2 (ENSMICG00000036776) #17	ADAD1 (ENSMICG00000015912) #18	BLTP1 (ENSMICG00000007069) #19	TRPC3 (ENSMICG00000007029) #20	BBS7 (ENSMICG00000007015) #21	CCNA2 (ENSMICG00000007007) #22	EXOSC9 (ENSMICG00000006994) #23	ENSMICG00000006989 #24	ANXA5 (ENSMICG00000010361) #25	ENSMICG00000046816	TRIML1 (ENSMICG00000005711)	TRIML2 (ENSMICG00000042678)	FAT1 (ENSMICG00000017246)	MTNR1A (ENSMICG00000046958)	F11 (ENSMICG00000002094)	KLKB1 (ENSMICG00000002077)	CYP4V2 (ENSMICG00000002068)	FAM149A (ENSMICG00000002055)	TLR3 (ENSMICG00000002049)	SORBS2 (ENSMICG00000010921)	PDLIM3 (ENSMICG00000010914)
Lemuriformes_a	ANCESTRAL SPECIES	96					ENSGT00940000157323 #12	ENSGT00390000008458 #13	ENSGT00940000161583 #14	ENSGT00390000008984 #15	ENSGT00940000162309	ENSGT00390000010494 #16	ENSGT00390000003555 #17	ENSGT00940000156842 #18	ENSGT00640000091487 #19	ENSGT01060000248588.a.c.b #20	ENSGT00390000012346 #21	ENSGT00940000155372 #22	ENSGT00950000183130.A #23	ENSGT01010000222815	ENSGT00640000091653 #24	ENSGT00940000155988 #25	ENSGT00390000004552.d	ENSGT00940000154582	ENSGT00940000162029	ENSGT00940000163257	ENSGT00940000157733	ENSGT00940000160321.d	ENSGT00940000158569	ENSGT00940000161669	ENSGT00940000157278	ENSGT00530000063727.B	ENSGT00940000159678
Greater bamboo lemur	MODERN SPECIES	340	DPY30 (ENSPSMG00000009208)	SPAST (ENSPSMG00000009365)	ENSPSMG00000009497	SPATA5 (ENSPSMG00000009517) #12	NUDT6 (ENSPSMG00000009524) #13	FGF2 (ENSPSMG00000009530) #14	BBS12 (ENSPSMG00000009538) #15	ENSPSMG00000009548	IL21 (ENSPSMG00000009564) #16	IL2 (ENSPSMG00000009610) #17	ADAD1 (ENSPSMG00000009678) #18	BLTP1 (ENSPSMG00000009812) #19	ENSPSMG00000009845	TRPC3 (ENSPSMG00000009898) #20	BBS7 (ENSPSMG00000009940) #21	CCNA2 (ENSPSMG00000009970) #22	EXOSC9 (ENSPSMG00000010006) #23	SMIM43 (ENSPSMG00000010020)	ENSPSMG00000010022 #24	ANXA5 (ENSPSMG00000010139) #25	ENSPSMG00000010314	TRIML1 (ENSPSMG00000010328)	TRIML2 (ENSPSMG00000010333)	ENSPSMG00000010342	ENSPSMG00000010348	ENSPSMG00000010356	ENSPSMG00000010366	FAT1 (ENSPSMG00000010459)	MTNR1A (ENSPSMG00000010536)	ENSPSMG00000010539	F11 (ENSPSMG00000010551)
Coquerels sifaka	MODERN SPECIES	456					SPATA5 (ENSPCOG00000027877) #12	NUDT6 (ENSPCOG00000016416) #13	ENSPCOG00000028263 #14	ENSPCOG00000023077	IL21 (ENSPCOG00000025060) #16	IL2 (ENSPCOG00000028196) #17	ADAD1 (ENSPCOG00000000862) #18	BLTP1 (ENSPCOG00000022896) #19	ENSPCOG00000020718	TRPC3 (ENSPCOG00000022308) #20	BBS7 (ENSPCOG00000020221) #21	CCNA2 (ENSPCOG00000014188) #22	EXOSC9 (ENSPCOG00000003962) #23	ANXA5 (ENSPCOG00000006708) #25	FRG1 (ENSPCOG00000022726)
Bushbaby	MODERN SPECIES	208	ENSOGAG00000026376	FAT4 (ENSOGAG00000002605) #9	ANKRD50 (ENSOGAG00000025786) #10	SPRY1 (ENSOGAG00000000899) #11	SPATA5 (ENSOGAG00000005980) #12	NUDT6 (ENSOGAG00000005979) #13	FGF2 (ENSOGAG00000026792) #14	BBS12 (ENSOGAG00000000359) #15	ENSOGAG00000033577	IL21 (ENSOGAG00000008464) #16	IL2 (ENSOGAG00000033865) #17	ADAD1 (ENSOGAG00000008455) #18	BLTP1 (ENSOGAG00000008439) #19	TRPC3 (ENSOGAG00000016124) #20	BBS7 (ENSOGAG00000016115) #21	CCNA2 (ENSOGAG00000016107) #22	EXOSC9 (ENSOGAG00000016104) #23	ANXA5 (ENSOGAG00000003878) #25
Euarchontoglires_A	ANCESTRAL SPECIES	9	ENSGT00390000001301 #7	ENSGT00940000155719.b #9	ENSGT00940000155116.b #10	ENSGT00950000183055.b.a #11	ENSGT00940000157323 #12	ENSGT00390000008458 #13	ENSGT00940000161583 #14	ENSGT00390000008984 #15	ENSGT00940000162309	ENSGT00390000010494 #16	ENSGT00390000003555 #17	ENSGT00940000156842 #18	ENSGT00640000091487 #19	ENSGT01060000248588.a.c.b #20	ENSGT00390000012346 #21	ENSGT00940000155372 #22	ENSGT00950000183130.A #23	ENSGT01010000222815	ENSGT00940000155988 #25	ENSGT01070000253744.a.b #27	ENSGT00510000046908.a.a.b #28	ENSGT00390000007586.a.b #29	ENSGT00940000158340 #30	ENSGT00940000153395.a #32	ENSGT00940000155475 #33	ENSGT00800000124172 #35	ENSGT00530000064570 #36	ENSGT00940000156337 #37	ENSGT00950000183027.b	ENSGT00950000183054.a.a.a	ENSGT00950000182924.A.b.a.b
Glires	ANCESTRAL SPECIES	8	ENSGT00390000001301 #7	ENSGT00940000155719.b #9	ENSGT00940000155116.b #10	ENSGT00950000183055.b.a #11	ENSGT00940000157323 #12	ENSGT00390000008458 #13	ENSGT00940000161583 #14	ENSGT00390000008984 #15	ENSGT00940000162309	ENSGT00390000010494 #16	ENSGT00390000003555 #17	ENSGT00940000156842 #18	ENSGT00640000091487 #19	ENSGT01060000248588.a.c.b #20	ENSGT00390000012346 #21	ENSGT00940000155372 #22	ENSGT00950000183130.A #23	ENSGT01010000222815	ENSGT00940000155988 #25	ENSGT01070000253744.a.b #27	ENSGT00510000046908.a.a.b #28	ENSGT00390000007586.a.b #29	ENSGT00940000158340 #30	ENSGT00940000153395.a #32	ENSGT00940000155475 #33	ENSGT00800000124172 #35	ENSGT00530000064570 #36	ENSGT00940000156337 #37	ENSGT00950000183027.b	ENSGT00950000183054.a.a.a	ENSGT00950000182924.A.b.a.b
Rodentia	ANCESTRAL SPECIES	13	ENSGT00390000001301 #7	ENSGT00940000155719.b #9	ENSGT00940000155116.b #10	ENSGT00950000183055.b.a #11	ENSGT00940000157323 #12	ENSGT00390000008458 #13	ENSGT00940000161583 #14	ENSGT00390000008984 #15	ENSGT00940000162309	ENSGT00390000010494 #16	ENSGT00390000003555 #17	ENSGT00940000156842 #18	ENSGT00640000091487 #19	ENSGT01060000248588.a.c.b #20	ENSGT00390000012346 #21	ENSGT00940000155372 #22	ENSGT00950000183130.A #23	ENSGT01010000222815	ENSGT00940000155988 #25	ENSGT01070000253744.a.b #27	ENSGT00510000046908.a.a.b #28	ENSGT00390000007586.a.b #29	ENSGT00940000158340 #30	ENSGT00940000153395.a #32	ENSGT00940000155475 #33	ENSGT00800000124172 #35	ENSGT00530000064570 #36	ENSGT00940000156337 #37	ENSGT00950000183027.b	ENSGT00950000183054.a.a.a	ENSGT00950000182924.A.b.a.b
Rodentia_A	ANCESTRAL SPECIES	24	ENSGT00390000001301 #7	ENSGT00940000155719.b #9	ENSGT00940000155116.b #10	ENSGT00950000183055.b.a #11	ENSGT00940000157323 #12	ENSGT00390000008458 #13	ENSGT00940000161583 #14	ENSGT00390000008984 #15	ENSGT00940000162309	ENSGT00390000010494 #16	ENSGT00390000003555 #17	ENSGT00940000156842 #18	ENSGT00640000091487 #19	ENSGT01060000248588.a.c.b #20	ENSGT00390000012346 #21	ENSGT00940000155372 #22	ENSGT00950000183130.A #23	ENSGT01010000222815	ENSGT00940000155988 #25	ENSGT01070000253744.a.b #27	ENSGT00510000046908.a.a.b #28	ENSGT00390000007586.a.b #29	ENSGT00940000158340 #30	ENSGT00940000153395.a #32	ENSGT00940000155475 #33	ENSGT00800000124172 #35	ENSGT00530000064570 #36	ENSGT00940000156337 #37	ENSGT00950000183027.b	ENSGT00950000183054.a.a.a	ENSGT00950000182924.A.b.a.b
Sciuridae	ANCESTRAL SPECIES	38	ENSGT00390000001301 #7	ENSGT00940000155719.b #9	ENSGT00940000155116.b #10	ENSGT00950000183055.b.a #11	ENSGT00940000157323 #12	ENSGT00390000008458 #13	ENSGT00940000161583 #14	ENSGT00390000008984 #15	ENSGT00940000162309	ENSGT00390000010494 #16	ENSGT00390000003555 #17	ENSGT00940000156842 #18	ENSGT00640000091487 #19	ENSGT01060000248588.a.c.b #20	ENSGT00390000012346 #21	ENSGT00940000155372 #22	ENSGT00950000183130.A #23	ENSGT01010000222815	ENSGT00940000155988 #25	ENSGT01070000253744.a.b #27	ENSGT00510000046908.a.a.b #28	ENSGT00390000007586.a.b #29	ENSGT00940000158340 #30	ENSGT00940000153395.a #32	ENSGT00940000155475 #33	ENSGT00800000124172 #35	ENSGT00940000156337 #37	ENSGT00950000183027.b	ENSGT00950000183054.a.a.a	ENSGT01060000248649.a	ENSGT00950000182924.A.b.a.b
Marmotini	ANCESTRAL SPECIES	45	ENSGT00390000001301 #7	ENSGT00940000155719.b #9	ENSGT00940000155116.b #10	ENSGT00950000183055.b.a #11	ENSGT00940000157323 #12	ENSGT00390000008458 #13	ENSGT00940000161583 #14	ENSGT00390000008984 #15	ENSGT00940000162309	ENSGT00390000010494 #16	ENSGT00390000003555 #17	ENSGT00940000156842 #18	ENSGT00640000091487 #19	ENSGT01060000248588.a.c.b #20	ENSGT00390000012346 #21	ENSGT00940000155372 #22	ENSGT00950000183130.A #23	ENSGT01010000222815	ENSGT00940000155988 #25	ENSGT01070000253744.a.b #27	ENSGT00510000046908.a.a.b #28	ENSGT00390000007586.a.b #29	ENSGT00940000158340 #30	ENSGT00940000153395.a #32
Marmotini_b	ANCESTRAL SPECIES	148	ENSGT00390000001301 #7	ENSGT00940000155719.b #9	ENSGT00940000155116.b #10	ENSGT00950000183055.b.a #11	ENSGT00940000157323 #12	ENSGT00390000008458 #13	ENSGT00940000161583 #14	ENSGT00390000008984 #15	ENSGT00940000162309	ENSGT00390000010494 #16	ENSGT00390000003555 #17	ENSGT00940000156842 #18	ENSGT00640000091487 #19	ENSGT01060000248588.a.c.b #20	ENSGT00390000012346 #21	ENSGT00940000155372 #22	ENSGT00950000183130.A #23	ENSGT01010000222815	ENSGT00940000155988 #25	ENSGT01070000253744.a.b #27	ENSGT00510000046908.a.a.b #28	ENSGT00390000007586.a.b #29	ENSGT00940000158340 #30	ENSGT00940000153395.a #32
Squirrel	MODERN SPECIES	262		FAT4 (ENSSTOG00000010020) #9	ANKRD50 (ENSSTOG00000020609) #10	SPRY1 (ENSSTOG00000019856) #11	SPATA5 (ENSSTOG00000016252) #12	NUDT6 (ENSSTOG00000020437) #13	FGF2 (ENSSTOG00000028359) #14	BBS12 (ENSSTOG00000010337) #15	ENSSTOG00000024309	IL21 (ENSSTOG00000012108) #16	IL2 (ENSSTOG00000016100) #17	ADAD1 (ENSSTOG00000027523) #18	BLTP1 (ENSSTOG00000016095) #19	TRPC3 (ENSSTOG00000014731) #20	BBS7 (ENSSTOG00000026947) #21	CCNA2 (ENSSTOG00000008011) #22	EXOSC9 (ENSSTOG00000007984) #23	ANXA5 (ENSSTOG00000015236) #25	QRFPR (ENSSTOG00000011128) #27	ENSSTOG00000002218 #28	NDNF (ENSSTOG00000026308) #29	PRDM5 (ENSSTOG00000004741) #30	MAD2L1 (ENSSTOG00000025410) #32
Arctic ground squirrel	MODERN SPECIES	504														TRPC3 (ENSUPAG00010003020) #20	BBS7 (ENSUPAG00010003036) #21	CCNA2 (ENSUPAG00010003078) #22	EXOSC9 (ENSUPAG00010003098) #23	SMIM43 (ENSUPAG00010003133)	ANXA5 (ENSUPAG00010003144) #25	QRFPR (ENSUPAG00010003178) #27	ENSUPAG00010003212 #28	NDNF (ENSUPAG00010003281) #29	PRDM5 (ENSUPAG00010003287) #30	MAD2L1 (ENSUPAG00010003371) #32
Alpin marmot	MODERN SPECIES	5	FAT4 (ENSMMMG00000014294) #9	ANKRD50 (ENSMMMG00000014280) #10	SPRY1 (ENSMMMG00000014257) #11	SPATA5 (ENSMMMG00000014189) #12	ENSMMMG00000014177 #13	FGF2 (ENSMMMG00000014167) #14	BBS12 (ENSMMMG00000014165) #15	ENSMMMG00000014128	ENSMMMG00000014115	IL21 (ENSMMMG00000014088) #16	IL2 (ENSMMMG00000014074) #17	ADAD1 (ENSMMMG00000014047) #18	BLTP1 (ENSMMMG00000013870) #19	TRPC3 (ENSMMMG00000013843) #20	BBS7 (ENSMMMG00000013792) #21	CCNA2 (ENSMMMG00000013774) #22	EXOSC9 (ENSMMMG00000013752) #23	ANXA5 (ENSMMMG00000013732) #25	QRFPR (ENSMMMG00000013643) #27	ENSMMMG00000013612 #28	NDNF (ENSMMMG00000013604) #29	PRDM5 (ENSMMMG00000013584) #30	MAD2L1 (ENSMMMG00000013561) #32
Eurasian red squirrel	MODERN SPECIES	18	FAT4 (ENSSVLG00005016900) #9	ANKRD50 (ENSSVLG00005016833) #10	SPRY1 (ENSSVLG00005016820) #11	SPATA5 (ENSSVLG00005016625) #12	NUDT6 (ENSSVLG00005016540) #13	FGF2 (ENSSVLG00005016503) #14	BBS12 (ENSSVLG00005016487) #15	ENSSVLG00005016460	ENSSVLG00005016447	IL21 (ENSSVLG00005016343) #16	IL2 (ENSSVLG00005016296) #17	ENSSVLG00005016021 #18	BLTP1 (ENSSVLG00005015963) #19	TRPC3 (ENSSVLG00005015770) #20	BBS7 (ENSSVLG00005015419) #21	CCNA2 (ENSSVLG00005015372) #22	ENSSVLG00005015214 #23	SMIM43 (ENSSVLG00005015189)	ANXA5 (ENSSVLG00005014980) #25	ENSSVLG00005014925	QRFPR (ENSSVLG00005014858) #27	NDNF (ENSSVLG00005014362) #29	PRDM5 (ENSSVLG00005014293) #30	MAD2L1 (ENSSVLG00005014204) #32	ENSSVLG00005014083	PDE5A (ENSSVLG00005013841) #33	FABP2 (ENSSVLG00005013640) #35	USP53 (ENSSVLG00005013592) #37	MYOZ2 (ENSSVLG00005013483)	ENSSVLG00005013417	SEC24D (ENSSVLG00005013288)
Hystricomorpha	ANCESTRAL SPECIES	38	ENSGT00390000001301 #7	ENSGT00940000155719.b #9	ENSGT00940000155116.b #10	ENSGT00950000183055.b.a #11	ENSGT00940000157323 #12	ENSGT00390000008458 #13	ENSGT00940000161583 #14	ENSGT00390000008984 #15	ENSGT00940000162309	ENSGT00390000010494 #16	ENSGT00390000003555 #17	ENSGT00940000156842 #18	ENSGT00640000091487 #19	ENSGT01060000248588.a.c.b #20	ENSGT00390000012346 #21	ENSGT00940000155372 #22	ENSGT00950000183130.A #23	ENSGT01010000222815	ENSGT00940000155988 #25	ENSGT01070000253744.a.b #27	ENSGT00510000046908.a.a.b #28	ENSGT00390000007586.a.b #29	ENSGT00940000158340 #30	ENSGT00940000153395.a #32	ENSGT00940000155475 #33	ENSGT00800000124172 #35	ENSGT00530000064570 #36	ENSGT00940000156337 #37	ENSGT00950000183027.b	ENSGT00950000183054.a.a.a	ENSGT00950000182924.A.b.a.b
Hystricomorpha_a	ANCESTRAL SPECIES	34	ENSGT00390000001301 #7	ENSGT00940000155719.b #9	ENSGT00940000155116.b #10	ENSGT00950000183055.b.a #11	ENSGT00940000157323 #12	ENSGT00390000008458 #13	ENSGT00940000161583 #14	ENSGT00390000008984 #15	ENSGT00940000162309	ENSGT00390000010494 #16	ENSGT00390000003555 #17	ENSGT00940000156842 #18	ENSGT00640000091487 #19	ENSGT01060000248588.a.c.b #20	ENSGT00390000012346 #21	ENSGT00940000155372 #22	ENSGT00950000183130.A #23	ENSGT00940000155988 #25	ENSGT01070000253744.a.b #27	ENSGT00510000046908.a.a.b #28	ENSGT00390000007586.a.b #29	ENSGT00940000158340 #30	ENSGT00940000153395.a #32	ENSGT00940000155475 #33	ENSGT00800000124172 #35	ENSGT00530000064570 #36	ENSGT00940000156337 #37	ENSGT00950000183027.b	ENSGT00950000183054.a.a.a	ENSGT00950000182924.A.b.a.b	ENSGT00550000075003
Hystricomorpha_b	ANCESTRAL SPECIES	75	ENSGT00390000001301 #7	ENSGT00940000155719.b #9	ENSGT00940000155116.b #10	ENSGT00950000183055.b.a #11	ENSGT00940000157323 #12	ENSGT00390000008458 #13	ENSGT00940000161583 #14	ENSGT00390000008984 #15	ENSGT00940000162309	ENSGT00390000010494 #16	ENSGT00390000003555 #17	ENSGT00940000156842 #18	ENSGT00640000091487 #19	ENSGT01060000248588.a.c.b #20	ENSGT00390000012346 #21	ENSGT00940000155372 #22	ENSGT00950000183130.A #23	ENSGT00940000155988 #25	ENSGT01070000253744.a.b #27	ENSGT00510000046908.a.a.b #28	ENSGT00390000007586.a.b #29	ENSGT00940000158340 #30	ENSGT00940000153395.a #32	ENSGT00940000155475 #33	ENSGT00800000124172 #35	ENSGT00530000064570 #36	ENSGT00940000156337 #37	ENSGT00950000183027.b	ENSGT00950000183054.a.a.a	ENSGT00950000182924.A.b.a.b	ENSGT00550000075003
Long-tailed chinchilla	MODERN SPECIES	135	INTU (ENSCLAG00000004954) #7	FAT4 (ENSCLAG00000006183) #9	ANKRD50 (ENSCLAG00000003314) #10	SPRY1 (ENSCLAG00000003787) #11	SPATA5 (ENSCLAG00000005265) #12	NUDT6 (ENSCLAG00000006306) #13	FGF2 (ENSCLAG00000003340) #14	ENSCLAG00000008111	BBS12 (ENSCLAG00000017705) #15	IL21 (ENSCLAG00000009098) #16	IL2 (ENSCLAG00000009317) #17	ADAD1 (ENSCLAG00000004688) #18	BLTP1 (ENSCLAG00000007818) #19	TRPC3 (ENSCLAG00000003574) #20	BBS7 (ENSCLAG00000004340) #21	CCNA2 (ENSCLAG00000003880) #22	EXOSC9 (ENSCLAG00000004644) #23	ANXA5 (ENSCLAG00000004278) #25	ENSCLAG00000005382	QRFPR (ENSCLAG00000006789) #27	TNIP3 (ENSCLAG00000004304) #28	NDNF (ENSCLAG00000004819) #29	PRDM5 (ENSCLAG00000005392) #30	ENSCLAG00000003295	MAD2L1 (ENSCLAG00000003756) #32	PDE5A (ENSCLAG00000004806) #33	FABP2 (ENSCLAG00000004293) #35	C4orf3 (ENSCLAG00000005064) #36	USP53 (ENSCLAG00000005403) #37	MYOZ2 (ENSCLAG00000003567)	SYNPO2 (ENSCLAG00000004412)
Degu	MODERN SPECIES	297				SPRY1 (ENSODEG00000000325) #11	SPATA5 (ENSODEG00000000401) #12	NUDT6 (ENSODEG00000000982) #13	FGF2 (ENSODEG00000001008) #14	BBS12 (ENSODEG00000001051) #15	ENSODEG00000001131	IL21 (ENSODEG00000001146) #16	IL2 (ENSODEG00000001158) #17	ADAD1 (ENSODEG00000001197) #18	BLTP1 (ENSODEG00000001505) #19	TRPC3 (ENSODEG00000001237) #20	BBS7 (ENSODEG00000001786) #21	CCNA2 (ENSODEG00000002082) #22	EXOSC9 (ENSODEG00000000589) #23	ANXA5 (ENSODEG00000000798) #25
Guinea pig	MODERN SPECIES	7	INTU (ENSCPOG00000001974) #7	FAT4 (ENSCPOG00000003631) #9	ANKRD50 (ENSCPOG00000012841) #10	SPRY1 (ENSCPOG00000035769) #11	SPATA5 (ENSCPOG00000005397) #12	ENSCPOG00000030140 #13	FGF2 (ENSCPOG00000005386) #14	BBS12 (ENSCPOG00000005539) #15	ENSCPOG00000021793	IL21 (ENSCPOG00000012431) #16	IL2 (ENSCPOG00000008265) #17	ADAD1 (ENSCPOG00000014455) #18	BLTP1 (ENSCPOG00000010581) #19	TRPC3 (ENSCPOG00000001231) #20	BBS7 (ENSCPOG00000001229) #21	CCNA2 (ENSCPOG00000010373) #22	EXOSC9 (ENSCPOG00000034344) #23	ANXA5 (ENSCPOG00000038586) #25	QRFPR (ENSCPOG00000001530) #27	TNIP3 (ENSCPOG00000003813) #28	NDNF (ENSCPOG00000009703) #29	PRDM5 (ENSCPOG00000012883) #30	MAD2L1 (ENSCPOG00000030145) #32	PDE5A (ENSCPOG00000008756) #33	FABP2 (ENSCPOG00000008750) #35	C4orf3 (ENSCPOG00000021561) #36	ENSCPOG00000001323 #37	MYOZ2 (ENSCPOG00000007291)	SYNPO2 (ENSCPOG00000020548)	SEC24D (ENSCPOG00000004621)	METTL14 (ENSCPOG00000037880)
Naked mole-rat female	DUPLICATION
Naked mole-rat female	MODERN SPECIES	14	ENSHGLG00000038666	OR9I1 (ENSHGLG00000038340)	ENSHGLG00000035281	OR9Q2 (ENSHGLG00000019956)	ENSHGLG00000020138	ENSHGLG00000044886	ENSHGLG00000033600	ENSHGLG00000036719	ENSHGLG00000020231	OR5B17 (ENSHGLG00000045759)	ENSHGLG00000049454	ENSHGLG00000042677	ENSHGLG00000037266	ENSHGLG00000046469	ENSHGLG00000037157	ENSHGLG00000046158 #22	ENSHGLG00000050170	ENSHGLG00000046303	ENSHGLG00000043701	OR5B2 (ENSHGLG00000038754)	LPXN (ENSHGLG00000005443)	ENSHGLG00000004685	CNTF (ENSHGLG00000037191)	ENSHGLG00000044293	ENSHGLG00000034597	ENSHGLG00000034438	ENSHGLG00000003602	ENSHGLG00000050943	ENSHGLG00000034936	GLYAT (ENSHGLG00000007196)	ENSHGLG00000048064
Naked mole-rat female	DUPLICATION
Naked mole-rat female	MODERN SPECIES	22	ENSHGLG00000044181	ENSHGLG00000035137	ENSHGLG00000039446	ENSHGLG00000018796 #9	ENSHGLG00000002030 #16	ENSHGLG00000041196 #15	SPATA5 (ENSHGLG00000002665) #12	NUDT6 (ENSHGLG00000040807) #13	ENSHGLG00000032095 #11	ANKRD50 (ENSHGLG00000010124) #10	ENSHGLG00000010627	ENSHGLG00000047556	ENSHGLG00000003394 #19	ENSHGLG00000003167 #20	BBS7 (ENSHGLG00000002879) #21	ENSHGLG00000002599 #22	EXOSC9 (ENSHGLG00000002467) #23	SMIM43 (ENSHGLG00000036790)	ENSHGLG00000035708 #25	ENSHGLG00000038676	ENSHGLG00000002280	ENSHGLG00000004934 #27	ENSHGLG00000033298	TNIP3 (ENSHGLG00000003668) #28	NDNF (ENSHGLG00000003417) #29	PRDM5 (ENSHGLG00000003010) #30	ENSHGLG00000040170	ENSHGLG00000004064	ENSHGLG00000047434 #32	ENSHGLG00000000181	ENSHGLG00000049304
Naked mole-rat female	MODERN SPECIES	24	ENSHGLG00000002410	ANKRD42 (ENSHGLG00000007952)	ENSHGLG00000014010	ENSHGLG00000043756	ENSHGLG00000046380	ENSHGLG00000042096	DLG2 (ENSHGLG00000004449)	ENSHGLG00000037235	ENSHGLG00000003500	ENSHGLG00000003233	CREBZF (ENSHGLG00000003083)	CCDC89 (ENSHGLG00000037872)	ENSHGLG00000002340	CCDC83 (ENSHGLG00000036065)	PICALM (ENSHGLG00000001052)	ENSHGLG00000001667 #22	EED (ENSHGLG00000001511)	ENSHGLG00000041908	CCDC81 (ENSHGLG00000001095)	ENSHGLG00000038302	ENSHGLG00000001103	ME3 (ENSHGLG00000001044)	ENSHGLG00000000902	PRSS23 (ENSHGLG00000047569)	FZD4 (ENSHGLG00000000698)	ENSHGLG00000032437	ENSHGLG00000043753	TMEM135 (ENSHGLG00000001739)	ENSHGLG00000045425	ENSHGLG00000034306	RAB38 (ENSHGLG00000041890)
Rodentia_B	ANCESTRAL SPECIES	30	ENSGT00390000001301 #7	ENSGT00940000155719.b #9	ENSGT00940000155116.b #10	ENSGT00950000183055.b.a #11	ENSGT00940000157323 #12	ENSGT00390000008458 #13	ENSGT00940000161583 #14	ENSGT00390000008984 #15	ENSGT00940000162309	ENSGT00390000010494 #16	ENSGT00390000003555 #17	ENSGT00940000156842 #18	ENSGT00640000091487 #19	ENSGT01060000248588.a.c.b #20	ENSGT00390000012346 #21	ENSGT00940000155372 #22	ENSGT00950000183130.A #23	ENSGT01010000222815	ENSGT00940000155988 #25	ENSGT01070000253744.a.b #27	ENSGT00510000046908.a.a.b #28	ENSGT00390000007586.a.b #29	ENSGT00940000158340 #30	ENSGT00940000153395.a #32	ENSGT00940000155475 #33	ENSGT00800000124172 #35	ENSGT00530000064570 #36	ENSGT00940000156337 #37	ENSGT00950000183027.b	ENSGT00950000183054.a.a.a	ENSGT00950000182924.A.b.a.b
Kangaroo rat	MODERN SPECIES	379	ENSDORG00000014556 #10	ENSDORG00000026905 #10	ENSDORG00000028714 #10	Spry1 (ENSDORG00000014328) #11	Spata5 (ENSDORG00000000525) #12	Nudt6 (ENSDORG00000026866) #13	Fgf2 (ENSDORG00000027523) #14	ENSDORG00000013293 #15	ENSDORG00000029033	Il21 (ENSDORG00000005664) #16	Il2 (ENSDORG00000014968) #17	Adad1 (ENSDORG00000015684) #18	Bltp1 (ENSDORG00000015310) #19	Trpc3 (ENSDORG00000015847) #20	Bbs7 (ENSDORG00000007687) #21	Ccna2 (ENSDORG00000007686) #22	Exosc9 (ENSDORG00000007684) #23	Anxa5 (ENSDORG00000006577) #25	Qrfpr (ENSDORG00000013419) #27	ENSDORG00000005102 #28	Ndnf (ENSDORG00000003957) #29	Prdm5 (ENSDORG00000007739) #30	Mad2l1 (ENSDORG00000000355) #32
Myomorpha	ANCESTRAL SPECIES	41	ENSGT00390000001301 #7	ENSGT00940000155719.b #9	ENSGT00940000155116.b #10	ENSGT00950000183055.b.a #11	ENSGT00940000157323 #12	ENSGT00390000008458 #13	ENSGT00940000161583 #14	ENSGT00390000008984 #15	ENSGT00940000162309	ENSGT00390000010494 #16	ENSGT00390000003555 #17	ENSGT00940000156842 #18	ENSGT00640000091487 #19	ENSGT01060000248588.a.c.b #20	ENSGT00390000012346 #21	ENSGT00940000155372 #22	ENSGT00950000183130.A #23	ENSGT01010000222815	ENSGT00940000155988 #25
Muroidea	ANCESTRAL SPECIES	56	ENSGT00390000001301 #7	ENSGT00940000155719.b #9	ENSGT00940000155116.b #10	ENSGT00950000183055.b.a #11	ENSGT00940000157323 #12	ENSGT00390000008458 #13	ENSGT00940000161583 #14	ENSGT00390000008984 #15	ENSGT00940000162309	ENSGT00390000010494 #16	ENSGT00390000003555 #17	ENSGT00940000156842 #18	ENSGT00640000091487 #19	ENSGT01060000248588.a.c.b #20	ENSGT00390000012346 #21	ENSGT00940000155372 #22	ENSGT00950000183130.A #23	ENSGT01010000222815	ENSGT00940000155988 #25
Muroidea_A	ANCESTRAL SPECIES	5	ENSGT00390000001301 #7	ENSGT00940000155719.b #9	ENSGT00940000155116.b #10	ENSGT00950000183055.b.a #11	ENSGT00940000157323 #12	ENSGT00390000008458 #13	ENSGT00940000161583 #14	ENSGT00390000008984 #15	ENSGT00940000162309	ENSGT00390000010494 #16	ENSGT00390000003555 #17	ENSGT00940000156842 #18	ENSGT00640000091487 #19	ENSGT01060000248588.a.c.b #20	ENSGT00390000012346 #21	ENSGT00940000155372 #22	ENSGT00950000183130.A #23	ENSGT01010000222815	ENSGT00940000155988 #25	ENSGT00950000183169.C	ENSGT00940000157312	ENSGT00940000153661.a.a	ENSGT00940000153661.b.b	ENSGT00940000156941	ENSGT00940000154552.b	ENSGT00940000156162.C.k	ENSGT00940000160614	ENSGT00940000154384.h.b.f	ENSGT00950000183189.a.b.a	ENSGT00390000015010	ENSGT00390000013701
Cricetidae	ANCESTRAL SPECIES	6	ENSGT00390000001301 #7	ENSGT00940000155719.b #9	ENSGT00940000155116.b #10	ENSGT00950000183055.b.a #11	ENSGT00940000157323 #12	ENSGT00390000008458 #13	ENSGT00940000161583 #14	ENSGT00390000008984 #15	ENSGT00940000162309	ENSGT00390000010494 #16	ENSGT00390000003555 #17	ENSGT00940000156842 #18	ENSGT00640000091487 #19	ENSGT01060000248588.a.c.b #20	ENSGT00390000012346 #21	ENSGT00940000155372 #22	ENSGT00950000183130.A #23	ENSGT00940000155988 #25	ENSGT00950000183169.C.d	ENSGT00940000157312	ENSGT00940000153661.a.a	ENSGT00940000153661.b.b	ENSGT00940000156941	ENSGT00940000154552.b	ENSGT00940000156162.C.k	ENSGT00940000160614	ENSGT00940000154384.h.a	ENSGT00950000183189.a.b.a	ENSGT00390000015010	ENSGT00390000013701.g.b	ENSGT00390000013701.g.a
Cricetinae	ANCESTRAL SPECIES	13	ENSGT00390000001301 #7	ENSGT00940000155719.b #9	ENSGT00940000155116.b #10	ENSGT00950000183055.b.a #11	ENSGT00940000157323 #12	ENSGT00390000008458 #13	ENSGT00940000161583 #14	ENSGT00390000008984 #15	ENSGT00940000162309	ENSGT00390000010494 #16	ENSGT00390000003555 #17	ENSGT00940000156842 #18	ENSGT00640000091487 #19	ENSGT01060000248588.a.c.b #20	ENSGT00390000012346 #21	ENSGT00940000155372 #22	ENSGT00950000183130.A #23	ENSGT00940000155988 #25	ENSGT01070000253744.a.b #27	ENSGT00950000183169.C.d	ENSGT00940000157312	ENSGT00940000153661.a.a	ENSGT00940000156941	ENSGT00940000154552.b	ENSGT00940000156162.C.k	ENSGT00940000160614	ENSGT00940000154384.h.a	ENSGT00950000183189.a.b.a	ENSGT00390000015010	ENSGT00390000013701.g.b	ENSGT00390000013701.g.a
Chinese hamster chok1gshd	MODERN SPECIES	352	Ankrd50 (ENSCGRG00001004029) #10	ENSCGRG00001005629	ENSCGRG00001014736	Spry1 (ENSCGRG00001009131) #11	Spata5 (ENSCGRG00001021381) #12	Nudt6 (ENSCGRG00001018080) #13	Fgf2 (ENSCGRG00001019372) #14	Bbs12 (ENSCGRG00001004097) #15	Cetn4 (ENSCGRG00001014508)	Il21 (ENSCGRG00001022512) #16	Il2 (ENSCGRG00001020461) #17	Adad1 (ENSCGRG00001010493) #18	Bltp1 (ENSCGRG00001009244) #19	Trpc3 (ENSCGRG00001021196) #20	Bbs7 (ENSCGRG00001022476) #21	Ccna2 (ENSCGRG00001021415) #22	Exosc9 (ENSCGRG00001023030) #23	Anxa5 (ENSCGRG00001011395) #25	Qrfpr (ENSCGRG00001015065) #27	Zfp267 (ENSCGRG00001019794)	Acad9 (ENSCGRG00001017444)	ENSCGRG00001017668	Mccc1 (ENSCGRG00001012469)	ENSCGRG00001019778	ENSCGRG00001013592	Atp11b (ENSCGRG00001021308)	Sox2 (ENSCGRG00001008732)	ENSCGRG00001000090	Fxr1 (ENSCGRG00001024795)	Ccdc39 (ENSCGRG00001018347)	Ttc14 (ENSCGRG00001021605)
Golden Hamster	MODERN SPECIES	636	Intu (ENSMAUG00000016415) #7	Fat4 (ENSMAUG00000012344) #9	ENSMAUG00000016745 #10	Spry1 (ENSMAUG00000016633) #11	Spata5 (ENSMAUG00000012654) #12	Nudt6 (ENSMAUG00000015235) #13	Fgf2 (ENSMAUG00000014645) #14	Bbs12 (ENSMAUG00000014987) #15	Cetn4 (ENSMAUG00000000102)	Il21 (ENSMAUG00000000414) #16	Il2 (ENSMAUG00000017109) #17	Adad1 (ENSMAUG00000018314) #18	Bltp1 (ENSMAUG00000017326) #19	ENSMAUG00000009808	Bbs7 (ENSMAUG00000001973) #21	Ccna2 (ENSMAUG00000018247) #22	Exosc9 (ENSMAUG00000008629) #23	Anxa5 (ENSMAUG00000014445) #25	Qrfpr (ENSMAUG00000016873) #27	Zfp267 (ENSMAUG00000000240)	Acad9 (ENSMAUG00000013695)	ENSMAUG00000011985	ENSMAUG00000000987	Mccc1 (ENSMAUG00000018926)	ENSMAUG00000019275	ENSMAUG00000018021	Atp11b (ENSMAUG00000000325)	Sox2 (ENSMAUG00000017052)	ENSMAUG00000011285	Fxr1 (ENSMAUG00000001188)	Ccdc39 (ENSMAUG00000009369)
Cricetidae_B	ANCESTRAL SPECIES	71				ENSGT00950000183055.b.a #11	ENSGT00940000157323 #12	ENSGT00390000008458 #13	ENSGT00940000161583 #14	ENSGT00390000008984 #15	ENSGT00940000162309	ENSGT00390000010494 #16	ENSGT00390000003555 #17	ENSGT00940000156842 #18	ENSGT00640000091487 #19	ENSGT01060000248588.a.c.b #20	ENSGT00390000012346 #21	ENSGT00940000155372 #22	ENSGT00950000183130.A #23	ENSGT01010000222815
Prairie vole	MODERN SPECIES	161				Spry1 (ENSMOCG00000001416) #11	Spata5 (ENSMOCG00000004564) #12	Nudt6 (ENSMOCG00000009378) #13	Fgf2 (ENSMOCG00000016462) #14	Cetn4 (ENSMOCG00000003304)	ENSMOCG00000011517	Il21 (ENSMOCG00000017450) #16	Il2 (ENSMOCG00000006543) #17	Adad1 (ENSMOCG00000013223) #18	Bltp1 (ENSMOCG00000000995) #19	Trpc3 (ENSMOCG00000004414) #20	Bbs7 (ENSMOCG00000000555) #21	Ccna2 (ENSMOCG00000000111) #22	Exosc9 (ENSMOCG00000007209) #23
Northern American deer mouse	MODERN SPECIES	19	ENSPEMG00000014607	Ankrd50 (ENSPEMG00000000443) #10	ENSPEMG00000028306	Spry1 (ENSPEMG00000030492) #11	Spata5 (ENSPEMG00000011499) #12	Nudt6 (ENSPEMG00000005707) #13	Fgf2 (ENSPEMG00000016190) #14	Bbs12 (ENSPEMG00000012255) #15	Cetn4 (ENSPEMG00000003679)	Il21 (ENSPEMG00000013277) #16	Il2 (ENSPEMG00000006965) #17	Adad1 (ENSPEMG00000013728) #18	Bltp1 (ENSPEMG00000000775) #19	Trpc3 (ENSPEMG00000010325) #20	Bbs7 (ENSPEMG00000011833) #21	Ccna2 (ENSPEMG00000009831) #22	Exosc9 (ENSPEMG00000000544) #23	Smim43 (ENSPEMG00000027033)	ENSPEMG00000025453	ENSPEMG00000025069	ENSPEMG00000029143	ENSPEMG00000030574	ENSPEMG00000023072	ENSPEMG00000023778	ENSPEMG00000022198	Agtr1b (ENSPEMG00000026806)	Cpb1 (ENSPEMG00000015871)	Cpa3 (ENSPEMG00000000978)	Gyg (ENSPEMG00000016029)	Hltf (ENSPEMG00000016172)	Hps3 (ENSPEMG00000006862)
Murinae	ANCESTRAL SPECIES	5	ENSGT00390000001301 #7	ENSGT00940000155719.b #9	ENSGT00940000155116.b #10	ENSGT00950000183055.b.a #11	ENSGT00940000157323 #12	ENSGT00390000008458 #13	ENSGT00940000161583 #14	ENSGT00390000008984 #15	ENSGT00940000162309	ENSGT00390000010494 #16	ENSGT00390000003555 #17	ENSGT00940000156842 #18	ENSGT00640000091487 #19	ENSGT01060000248588.a.c.b #20	ENSGT00390000012346 #21	ENSGT00940000155372 #22	ENSGT00950000183130.A #23	ENSGT01010000222815	ENSGT00940000155988 #25	ENSGT00950000183169.C	ENSGT00940000157312	ENSGT00940000153661.a.a	ENSGT00940000156941	ENSGT00940000154552.b	ENSGT00940000156162.C.k	ENSGT00940000160614	ENSGT00940000154384.h.b.f	ENSGT00950000183189.a.b.a	ENSGT00390000015010	ENSGT00390000013701	ENSGT00940000155931
Mus	ANCESTRAL SPECIES	7	ENSGT00390000001301 #7	ENSGT00940000155719.b #9	ENSGT00940000155116.b #10	ENSGT00950000183055.b.a #11	ENSGT00940000157323 #12	ENSGT00390000008458 #13	ENSGT00940000161583 #14	ENSGT00390000008984 #15	ENSGT00940000162309	ENSGT00390000010494 #16	ENSGT00390000003555 #17	ENSGT00940000156842 #18	ENSGT00640000091487 #19	ENSGT01060000248588.a.c.b #20	ENSGT00390000012346 #21	ENSGT00940000155372 #22	ENSGT00950000183130.A #23	ENSGT01010000222815	ENSGT00860000136163	ENSGT00940000155988 #25	ENSGT00950000183169.C	ENSGT00940000157312	ENSGT00940000153661.a.a	ENSGT00940000156941	ENSGT00940000154552.b	ENSGT00940000156162.C.k	ENSGT00940000160614	ENSGT00940000154384.h.b.f	ENSGT00950000183189.a.b.a	ENSGT00390000015010	ENSGT00390000013701
Mus_A	ANCESTRAL SPECIES	9	ENSGT00390000001301 #7	ENSGT00940000155719.b #9	ENSGT00940000155116.b #10	ENSGT00950000183055.b.a #11	ENSGT00940000157323 #12	ENSGT00390000008458 #13	ENSGT00940000161583 #14	ENSGT00390000008984 #15	ENSGT00940000162309	ENSGT00390000010494 #16	ENSGT00390000003555 #17	ENSGT00940000156842 #18	ENSGT00640000091487 #19	ENSGT01060000248588.a.c.b #20	ENSGT00390000012346 #21	ENSGT00940000155372 #22	ENSGT00950000183130.A #23	ENSGT01010000222815	ENSGT00860000136163	ENSGT00940000155988 #25	ENSGT00950000183169.C	ENSGT00940000157312	ENSGT00940000153661.a.a	ENSGT00940000153661.b.b	ENSGT00940000156941	ENSGT00940000154552.b	ENSGT00940000156162.C.k	ENSGT00940000160614	ENSGT00940000154384.h.b.f	ENSGT00950000183189.a.b.a	ENSGT00390000015010
Mus_B	ANCESTRAL SPECIES	8	ENSGT00390000001301 #7	ENSGT00940000155719.b #9	ENSGT00940000155116.b #10	ENSGT00950000183055.b.a #11	ENSGT00940000157323 #12	ENSGT00390000008458 #13	ENSGT00940000161583 #14	ENSGT00390000008984 #15	ENSGT00940000162309	ENSGT00390000010494 #16	ENSGT00390000003555 #17	ENSGT00940000156842 #18	ENSGT00640000091487 #19	ENSGT01060000248588.a.c.b #20	ENSGT00390000012346 #21	ENSGT00940000155372 #22	ENSGT00950000183130.A #23	ENSGT01010000222815	ENSGT00860000136163	ENSGT00940000155988 #25	ENSGT00950000183169.C	ENSGT00940000157312	ENSGT00940000153661.a.a	ENSGT00940000156941	ENSGT00940000154552.b	ENSGT00940000156162.C.k	ENSGT00940000160614	ENSGT00940000154384.h.b.f	ENSGT00950000183189.a.b.a	ENSGT00390000015010	ENSGT00390000013701
Mus_C	ANCESTRAL SPECIES	6	ENSGT00940000160648	ENSGT00390000001301 #7	ENSGT00940000155116.b #10	ENSGT00950000183055.b.a #11	ENSGT00940000157323 #12	ENSGT00390000008458 #13	ENSGT00940000161583 #14	ENSGT00390000008984 #15	ENSGT00940000162309	ENSGT00390000010494 #16	ENSGT00390000003555 #17	ENSGT00940000156842 #18	ENSGT00640000091487 #19	ENSGT01060000248588.a.c.b #20	ENSGT00390000012346 #21	ENSGT00940000155372 #22	ENSGT00950000183130.A #23	ENSGT01010000222815	ENSGT00860000136163	ENSGT00940000155988 #25	ENSGT00950000183169.C	ENSGT00940000157312	ENSGT00940000153661.a.a	ENSGT00940000156941	ENSGT00940000154552.b	ENSGT00940000156162.C.k	ENSGT00940000160614	ENSGT00940000154384.h.b.f	ENSGT00950000183189.a.b.a	ENSGT00390000015010	ENSGT00390000013701
spretus	MODERN SPECIES	12	Intu (MGP_SPRETEiJ_G0025890) #7	Fat4 (MGP_SPRETEiJ_G0025889) #9	Ankrd50 (MGP_SPRETEiJ_G0025888) #10	Spry1 (MGP_SPRETEiJ_G0025886) #11	Spata5 (MGP_SPRETEiJ_G0025885) #12	Nudt6 (MGP_SPRETEiJ_G0025884) #13	Fgf2 (MGP_SPRETEiJ_G0025883) #14	Bbs12 (MGP_SPRETEiJ_G0025882) #15	Cetn4 (MGP_SPRETEiJ_G0025881)	Il21 (MGP_SPRETEiJ_G0025880) #16	Il2 (MGP_SPRETEiJ_G0025879) #17	MGP_SPRETEiJ_G0025878 #18	MGP_SPRETEiJ_G0025877 #19	Trpc3 (MGP_SPRETEiJ_G0025876) #20	Bbs7 (MGP_SPRETEiJ_G0025875) #21	Ccna2 (MGP_SPRETEiJ_G0025874) #22	Exosc9 (MGP_SPRETEiJ_G0025873) #23	MGP_SPRETEiJ_G0025872	Anxa5 (MGP_SPRETEiJ_G0025871) #25	Qrfpr (MGP_SPRETEiJ_G0025870) #27	Zfp267 (MGP_SPRETEiJ_G0025869)	Acad9 (MGP_SPRETEiJ_G0025868)	MGP_SPRETEiJ_G0025867	Mccc1 (MGP_SPRETEiJ_G0025866)	MGP_SPRETEiJ_G0025865	Atp11b (MGP_SPRETEiJ_G0025864)	Sox2 (MGP_SPRETEiJ_G0025863)	Dnajc19 (MGP_SPRETEiJ_G0025862)	Fxr1 (MGP_SPRETEiJ_G0025861)	Ccdc39 (MGP_SPRETEiJ_G0025860)	Ttc14 (MGP_SPRETEiJ_G0025859)
Steppe mouse	MODERN SPECIES	2979		Spry1 (ENSMSIG00000011699) #11	Spata5 (ENSMSIG00000011608) #12	Nudt6 (ENSMSIG00000011537) #13	Fgf2 (ENSMSIG00000011514) #14	ENSMSIG00000011508	Bbs12 (ENSMSIG00000011504) #15	ENSMSIG00000011420	Il21 (ENSMSIG00000011385) #16	Il2 (ENSMSIG00000011366) #17	ENSMSIG00000011352	Adad1 (ENSMSIG00000011307) #18	Bltp1 (ENSMSIG00000010361) #19	Trpc3 (ENSMSIG00000010293) #20	Bbs7 (ENSMSIG00000010231) #21	Ccna2 (ENSMSIG00000010165) #22	Exosc9 (ENSMSIG00000010121) #23	Smim43 (ENSMSIG00000010117)	1810062G17Rik (ENSMSIG00000010099)	Anxa5 (ENSMSIG00000010071) #25
Mouse	MODERN SPECIES	12	Fat4 (ENSMUSG00000046743) #9	Ankrd50 (ENSMUSG00000044864) #10	Gm5148 (ENSMUSG00000058174)	Spry1 (ENSMUSG00000037211) #11	Spata5 (ENSMUSG00000027722) #12	Nudt6 (ENSMUSG00000050174) #13	Fgf2 (ENSMUSG00000037225) #14	Bbs12 (ENSMUSG00000051444) #15	Cetn4 (ENSMUSG00000045031)	Il21 (ENSMUSG00000027718) #16	Il2 (ENSMUSG00000027720) #17	Adad1 (ENSMUSG00000027719) #18	Bltp1 (ENSMUSG00000037270) #19	Trpc3 (ENSMUSG00000027716) #20	Bbs7 (ENSMUSG00000037325) #21	Ccna2 (ENSMUSG00000027715) #22	Exosc9 (ENSMUSG00000027714) #23	Smim43 (ENSMUSG00000085007)	1810062G17Rik (ENSMUSG00000027713)	Anxa5 (ENSMUSG00000027712) #25	Qrfpr (ENSMUSG00000058400) #27	Zfp267 (ENSMUSG00000033883)	Acad9 (ENSMUSG00000027710)	Ccdc144b (ENSMUSG00000047696)	Mccc1 (ENSMUSG00000027709)	Dcun1d1 (ENSMUSG00000027708)	Atp11b (ENSMUSG00000037400)	Sox2 (ENSMUSG00000074637)	Dnajc19 (ENSMUSG00000027679)	Fxr1 (ENSMUSG00000027680)	Ccdc39 (ENSMUSG00000027676)
Ryukyu mouse	MODERN SPECIES	12	Intu (MGP_CAROLIEiJ_G0024956) #7	Fat4 (MGP_CAROLIEiJ_G0024955) #9	Ankrd50 (MGP_CAROLIEiJ_G0024954) #10	Spry1 (MGP_CAROLIEiJ_G0024952) #11	Spata5 (MGP_CAROLIEiJ_G0024951) #12	Nudt6 (MGP_CAROLIEiJ_G0024950) #13	Fgf2 (MGP_CAROLIEiJ_G0024949) #14	Bbs12 (MGP_CAROLIEiJ_G0024948) #15	Cetn4 (MGP_CAROLIEiJ_G0024947)	Il21 (MGP_CAROLIEiJ_G0024946) #16	Il2 (MGP_CAROLIEiJ_G0024945) #17	Adad1 (MGP_CAROLIEiJ_G0024944) #18	Bltp1 (MGP_CAROLIEiJ_G0024943) #19	Trpc3 (MGP_CAROLIEiJ_G0024942) #20	Bbs7 (MGP_CAROLIEiJ_G0024941) #21	Ccna2 (MGP_CAROLIEiJ_G0024940) #22	Exosc9 (MGP_CAROLIEiJ_G0024939) #23	MGP_CAROLIEiJ_G0024938	Anxa5 (MGP_CAROLIEiJ_G0024937) #25	Qrfpr (MGP_CAROLIEiJ_G0024936) #27	Zfp267 (MGP_CAROLIEiJ_G0024935)	MGP_CAROLIEiJ_G0024934	MGP_CAROLIEiJ_G0024933	Mccc1 (MGP_CAROLIEiJ_G0024932)	MGP_CAROLIEiJ_G0024931	Atp11b (MGP_CAROLIEiJ_G0024930)	Sox2 (MGP_CAROLIEiJ_G0024929)	MGP_CAROLIEiJ_G0024928	Fxr1 (MGP_CAROLIEiJ_G0024927)	Ccdc39 (MGP_CAROLIEiJ_G0024926)	Ttc14 (MGP_CAROLIEiJ_G0024925)
Shrew mouse	MODERN SPECIES	17	Intu (MGP_PahariEiJ_G0026396) #7	Fat4 (MGP_PahariEiJ_G0026395) #9	Ankrd50 (MGP_PahariEiJ_G0026394) #10	Spry1 (MGP_PahariEiJ_G0026392) #11	Spata5 (MGP_PahariEiJ_G0026391) #12	Nudt6 (MGP_PahariEiJ_G0026390) #13	Fgf2 (MGP_PahariEiJ_G0026389) #14	Bbs12 (MGP_PahariEiJ_G0026388) #15	Cetn4 (MGP_PahariEiJ_G0026387)	Il21 (MGP_PahariEiJ_G0026386) #16	Il2 (MGP_PahariEiJ_G0026385) #17	Adad1 (MGP_PahariEiJ_G0026384) #18	Bltp1 (MGP_PahariEiJ_G0026383) #19	Trpc3 (MGP_PahariEiJ_G0026382) #20	Bbs7 (MGP_PahariEiJ_G0026381) #21	Ccna2 (MGP_PahariEiJ_G0026380) #22	Exosc9 (MGP_PahariEiJ_G0026379) #23	MGP_PahariEiJ_G0026378	Anxa5 (MGP_PahariEiJ_G0026377) #25	Qrfpr (MGP_PahariEiJ_G0026376) #27	Zfp267 (MGP_PahariEiJ_G0026375)	MGP_PahariEiJ_G0026374	Sox2 (MGP_PahariEiJ_G0026373)	Dnajc19 (MGP_PahariEiJ_G0026372)	Fxr1 (MGP_PahariEiJ_G0026371)	MGP_PahariEiJ_G0026370	Pex5l (MGP_PahariEiJ_G0026369)	Usp13 (MGP_PahariEiJ_G0026368)	Ndufb5 (MGP_PahariEiJ_G0026367)	Mrpl47 (MGP_PahariEiJ_G0026366)	Actl6a (MGP_PahariEiJ_G0026365)
Rat	MODERN SPECIES	11	Fat4 (ENSRNOG00000028335) #9	Ankrd50 (ENSRNOG00000010534) #10	ENSRNOG00000067850	Spry1 (ENSRNOG00000025371) #11	Spata5 (ENSRNOG00000017462) #12	Nudt6 (ENSRNOG00000017420) #13	Fgf2 (ENSRNOG00000017392) #14	Bbs12 (ENSRNOG00000068263) #15	Cetn4 (ENSRNOG00000026162)	Il21 (ENSRNOG00000017376) #16	Il2 (ENSRNOG00000017348) #17	Adad1 (ENSRNOG00000017246) #18	Bltp1 (ENSRNOG00000038436) #19	Trpc3 (ENSRNOG00000016070) #20	Bbs7 (ENSRNOG00000015816) #21	Ccna2 (ENSRNOG00000015423) #22	Exosc9 (ENSRNOG00000014674) #23	Smim43 (ENSRNOG00000070831)	Anxa5 (ENSRNOG00000014453) #25	Qrfpr (ENSRNOG00000014414) #27	Arsl (ENSRNOG00000028350)	ENSRNOG00000066024	Zfp267 (ENSRNOG00000042283)	Acad9 (ENSRNOG00000014178)	ENSRNOG00000065565	Ccdc144b (ENSRNOG00000056177)	Mccc1 (ENSRNOG00000013293)	Dcun1d1 (ENSRNOG00000012734)	Atp11b (ENSRNOG00000052116)	Sox2 (ENSRNOG00000012199)	Dnajc19 (ENSRNOG00000049819)
Upper Galilee mountains blind mole rat	MODERN SPECIES	1479		Spry1 (ENSNGAG00000018272) #11	ENSNGAG00000024135	Spata5 (ENSNGAG00000009558) #12	Nudt6 (ENSNGAG00000019409) #13	Fgf2 (ENSNGAG00000019024) #14	ENSNGAG00000021800	Bbs12 (ENSNGAG00000012809) #15	Cetn4 (ENSNGAG00000020314)	Il21 (ENSNGAG00000010461) #16	Il2 (ENSNGAG00000017797) #17	Adad1 (ENSNGAG00000020288) #18	Bltp1 (ENSNGAG00000011522) #19	Trpc3 (ENSNGAG00000000966) #20	Bbs7 (ENSNGAG00000005124) #21	Ccna2 (ENSNGAG00000022010) #22	Exosc9 (ENSNGAG00000022671) #23
Lesser Egyptian jerboa	MODERN SPECIES	140	ENSJJAG00000019672	Spry1 (ENSJJAG00000019384) #11	Spata5 (ENSJJAG00000018681) #12	ENSJJAG00000011442 #13	ENSJJAG00000011162	Fgf2 (ENSJJAG00000008668) #14	Cetn4 (ENSJJAG00000001632)	Il21 (ENSJJAG00000000196) #16	Il2 (ENSJJAG00000022869) #17	Adad1 (ENSJJAG00000022661) #18	Bltp1 (ENSJJAG00000022082) #19	ENSJJAG00000018073	ENSJJAG00000013168	Trpc3 (ENSJJAG00000017994) #20	Bbs7 (ENSJJAG00000018393) #21	Ccna2 (ENSJJAG00000014491) #22	Exosc9 (ENSJJAG00000008858) #23	Anxa5 (ENSJJAG00000021568) #25	Acad9 (ENSJJAG00000015247)	ENSJJAG00000004057	Fbxw17 (ENSJJAG00000021791)	ENSJJAG00000020570	Gng5c (ENSJJAG00000019410)	ENSJJAG00000012845	Naa35 (ENSJJAG00000017242)	ENSJJAG00000005663	Ntrk2 (ENSJJAG00000021752)
Lagomorpha	ANCESTRAL SPECIES	93	ENSGT00390000001301 #7	ENSGT00940000155719.b #9	ENSGT00940000155116.b #10	ENSGT00950000183055.b.a #11	ENSGT00940000157323 #12	ENSGT00390000008458 #13	ENSGT00940000161583 #14	ENSGT00390000008984 #15	ENSGT00940000162309	ENSGT00390000010494 #16	ENSGT00390000003555 #17	ENSGT00940000156842 #18	ENSGT00640000091487 #19	ENSGT01060000248588.a.c.b #20	ENSGT00390000012346 #21	ENSGT00940000155372 #22	ENSGT00950000183130.A #23	ENSGT01010000222815	ENSGT00940000155988 #25	ENSGT01070000253744.a.b #27	ENSGT00510000046908.a.a.b #28	ENSGT00390000007586.a.b #29	ENSGT00940000158340 #30	ENSGT00940000153395.a #32	ENSGT00940000155475 #33	ENSGT00800000124172 #35	ENSGT00530000064570 #36	ENSGT00940000156337 #37	ENSGT00950000183027.b	ENSGT00950000183054.a.a.a	ENSGT00950000182924.A.b.a.b
Rabbit	DUPLICATION
Rabbit	MODERN SPECIES	6	ENSOCUG00000024721	ENSOCUG00000000482 #13	FGF2 (ENSOCUG00000000476) #14	BBS12 (ENSOCUG00000015252) #15	ENSOCUG00000022164	IL21 (ENSOCUG00000015304) #16	IL-2 (ENSOCUG00000010100) #17	ADAD1 (ENSOCUG00000012989) #18	BLTP1 (ENSOCUG00000014811) #19	TRPC3 (ENSOCUG00000009487) #20	ENSOCUG00000031507	ENSOCUG00000030634	ENSOCUG00000034627	ENSOCUG00000036368	BBS7 (ENSOCUG00000003053) #21	ENSOCUG00000028042 #22	EXOSC9 (ENSOCUG00000003046) #23	SMIM43 (ENSOCUG00000038273)	ANXA5 (ENSOCUG00000017760) #25	ENSOCUG00000007852	ENSOCUG00000016694	QRFPR (ENSOCUG00000000563) #27	TNIP3 (ENSOCUG00000001973) #28	NDNF (ENSOCUG00000002038) #29	ENSOCUG00000036546	PRDM5 (ENSOCUG00000013454) #30	MAD2L1 (ENSOCUG00000008243) #32	PDE5A (ENSOCUG00000009417) #33	FABP2 (ENSOCUG00000003293) #35	ENSOCUG00000030903 #36	USP53 (ENSOCUG00000013733) #37
Rabbit	MODERN SPECIES	5	CD200 (ENSOCUG00000009949)	ENSOCUG00000029264	SLC9C1 (ENSOCUG00000009937)	GCSAM (ENSOCUG00000009933)	C3orf52 (ENSOCUG00000009929)	TMPRSS7 (ENSOCUG00000009920)	TAGLN3 (ENSOCUG00000003970)	ABHD10 (ENSOCUG00000003969)	PHLDB2 (ENSOCUG00000003962)	CD96 (ENSOCUG00000001351)	ZBED2 (ENSOCUG00000029023)	ENSOCUG00000017796	NECTIN3 (ENSOCUG00000000727)	ENSOCUG00000029031	ENSOCUG00000022089	ENSOCUG00000003051 #22	ENSOCUG00000003175	MORC1 (ENSOCUG00000008369)	ENSOCUG00000032539	ENSOCUG00000029310	TRAT1 (ENSOCUG00000002916)	ENSOCUG00000026237	DZIP3 (ENSOCUG00000003105)	CIP2A (ENSOCUG00000003095)	ENSOCUG00000031726	ENSOCUG00000006159	ENSOCUG00000024027	ENSOCUG00000001452	IFT57 (ENSOCUG00000003973)	ENSOCUG00000003966	BBX (ENSOCUG00000001686)
Pika	MODERN SPECIES	765														TRPC3 (ENSOPRG00000001246) #20	BBS7 (ENSOPRG00000001202) #21	ENSOPRG00000001183 #22	EXOSC9 (ENSOPRG00000001158) #23
Tree shrew	MODERN SPECIES	3184														TRPC3 (ENSTBEG00000013896) #20	BBS7 (ENSTBEG00000013504) #21	CCNA2 (ENSTBEG00000012951) #22	EXOSC9 (ENSTBEG00000012684) #23	ENSTBEG00000012388 #24	ANXA5 (ENSTBEG00000012156) #25
Laurasiatheria	ANCESTRAL SPECIES	11	ENSGT00390000001301 #7	ENSGT00940000155719.b #9	ENSGT00940000155116.b #10	ENSGT00950000183055.b.a #11	ENSGT00940000157323 #12	ENSGT00390000008458 #13	ENSGT00940000161583 #14	ENSGT00390000008984 #15	ENSGT00940000162309	ENSGT00390000010494 #16	ENSGT00390000003555 #17	ENSGT00940000156842 #18	ENSGT00640000091487 #19	ENSGT01060000248588.a.c.b #20	ENSGT00390000012346 #21	ENSGT00940000155372 #22	ENSGT00950000183130.A #23	ENSGT01010000222815	ENSGT00640000091653 #24	ENSGT00940000155988 #25	ENSGT01070000253744.a.b #27	ENSGT00510000046908.a.a.b #28	ENSGT00390000007586.a.b #29	ENSGT00940000158340 #30	ENSGT00940000153395.a #32	ENSGT00940000154633	ENSGT00940000156916	ENSGT00940000155475 #33	ENSGT00800000124172 #35	ENSGT00530000064570 #36	ENSGT00940000156337 #37
Eulipotyphla	ANCESTRAL SPECIES	1276																ENSGT00940000155372 #22	ENSGT00950000183130.A #23
Common shrew	MODERN SPECIES	3212																CCNA2 (ENSSARG00000002740) #22
Hedgehog	MODERN SPECIES	2340																CCNA2 (ENSEEUG00000013721) #22	EXOSC9 (ENSEEUG00000013683) #23
Laurasiatheria_a	ANCESTRAL SPECIES	8	ENSGT00390000001301 #7	ENSGT00940000155719.b #9	ENSGT00940000155116.b #10	ENSGT00950000183055.b.a #11	ENSGT00940000157323 #12	ENSGT00390000008458 #13	ENSGT00940000161583 #14	ENSGT00390000008984 #15	ENSGT00940000162309	ENSGT00390000010494 #16	ENSGT00390000003555 #17	ENSGT00940000156842 #18	ENSGT00640000091487 #19	ENSGT01060000248588.a.c.b #20	ENSGT00390000012346 #21	ENSGT00940000155372 #22	ENSGT00950000183130.A #23	ENSGT01010000222815	ENSGT00640000091653 #24	ENSGT00940000155988 #25	ENSGT01070000253744.a.b #27	ENSGT00510000046908.a.a.b #28	ENSGT00390000007586.a.b #29	ENSGT00940000158340 #30	ENSGT00940000153395.a #32	ENSGT00940000163685	ENSGT00940000155475 #33	ENSGT00800000124172 #35	ENSGT00530000064570 #36	ENSGT00940000156337 #37	ENSGT00950000183027.b
Artiodactyla	ANCESTRAL SPECIES	12	ENSGT00390000001301 #7	ENSGT00940000155719.b #9	ENSGT00940000155116.b #10	ENSGT00950000183055.b.a #11	ENSGT00940000157323 #12	ENSGT00390000008458 #13	ENSGT00940000161583 #14	ENSGT00390000008984 #15	ENSGT00940000162309	ENSGT00390000010494 #16	ENSGT00390000003555 #17	ENSGT00940000156842 #18	ENSGT00640000091487 #19	ENSGT01060000248588.a.c.b #20	ENSGT00390000012346 #21	ENSGT00940000155372 #22	ENSGT00950000183130.A #23	ENSGT01010000222815	ENSGT00640000091653 #24	ENSGT00940000155988 #25	ENSGT01070000253744.a.b #27	ENSGT00510000046908.a.a.b #28	ENSGT00390000007586.a.b #29	ENSGT00940000158340 #30	ENSGT00940000153395.a #32	ENSGT00940000163685	ENSGT00940000155475 #33	ENSGT00800000124172 #35	ENSGT00530000064570 #36	ENSGT00940000156337 #37	ENSGT00950000183027.b
Suina	ANCESTRAL SPECIES	22	ENSGT00390000001301 #7	ENSGT00940000155719.b #9	ENSGT00940000155116.b #10	ENSGT00950000183055.b.a #11	ENSGT00940000157323 #12	ENSGT00390000008458 #13	ENSGT00940000161583 #14	ENSGT00390000008984 #15	ENSGT00940000162309	ENSGT00390000010494 #16	ENSGT00390000003555 #17	ENSGT00940000156842 #18	ENSGT00640000091487 #19	ENSGT01060000248588.a.c.b #20	ENSGT00390000012346 #21	ENSGT00940000155372 #22	ENSGT00950000183130.A #23	ENSGT01010000222815	ENSGT00940000155988 #25	ENSGT01070000253744.a.b #27	ENSGT00510000046908.a.a.b #28	ENSGT00390000007586.a.b #29	ENSGT00940000158340 #30	ENSGT00940000153395.a #32	ENSGT00940000163685	ENSGT00940000155475 #33	ENSGT00800000124172 #35	ENSGT00530000064570 #36	ENSGT00940000156337 #37	ENSGT00950000183027.b	ENSGT00950000183054.a.a.a
Pig	MODERN SPECIES	16	ANKRD50 (ENSSSCG00000022173) #10	SPRY1 (ENSSSCG00000009083) #11	ENSSSCG00000050208	ENSSSCG00000059756	SPATA5 (ENSSSCG00000009084) #12	NUDT6 (ENSSSCG00000009085) #13	FGF2 (ENSSSCG00000036213) #14	BBS12 (ENSSSCG00000026290) #15	ENSSSCG00000034743	IL21 (ENSSSCG00000009087) #16	IL2 (ENSSSCG00000033267) #17	ADAD1 (ENSSSCG00000009089) #18	BLTP1 (ENSSSCG00000009090) #19	TRPC3 (ENSSSCG00000009092) #20	BBS7 (ENSSSCG00000009093) #21	CCNA2 (ENSSSCG00000060144) #22	EXOSC9 (ENSSSCG00000009096) #23	SMIM43 (ENSSSCG00000044775)	ANXA5 (ENSSSCG00000009097) #25	QRFPR (ENSSSCG00000009098) #27	ENSSSCG00000056121	TNIP3 (ENSSSCG00000009100) #28	NDNF (ENSSSCG00000029260) #29	PRDM5 (ENSSSCG00000009101) #30	ENSSSCG00000044436	ENSSSCG00000009102	MAD2L1 (ENSSSCG00000036256) #32	ENSSSCG00000009105	ENSSSCG00000053153	PDE5A (ENSSSCG00000009106) #33	ENSSSCG00000053989
Chacoan peccary	MODERN SPECIES	119		FAT4 (ENSCWAG00000019298) #9	ANKRD50 (ENSCWAG00000019264) #10	SPRY1 (ENSCWAG00000019252) #11	SPATA5 (ENSCWAG00000019195) #12	NUDT6 (ENSCWAG00000019160) #13	FGF2 (ENSCWAG00000019141) #14	BBS12 (ENSCWAG00000019133) #15	ENSCWAG00000019119	IL21 (ENSCWAG00000019092) #16	IL2 (ENSCWAG00000019071) #17	ADAD1 (ENSCWAG00000018954) #18	BLTP1 (ENSCWAG00000018880) #19	TRPC3 (ENSCWAG00000018691) #20	BBS7 (ENSCWAG00000018624) #21	CCNA2 (ENSCWAG00000018594) #22	EXOSC9 (ENSCWAG00000018512) #23	SMIM43 (ENSCWAG00000018501)	ANXA5 (ENSCWAG00000018407) #25	QRFPR (ENSCWAG00000018344) #27	TNIP3 (ENSCWAG00000018124) #28	NDNF (ENSCWAG00000018086) #29	PRDM5 (ENSCWAG00000017918) #30	MAD2L1 (ENSCWAG00000017871) #32	ENSCWAG00000017822	ENSCWAG00000017799	PDE5A (ENSCWAG00000017523) #33	ENSCWAG00000017457	FABP2 (ENSCWAG00000017424) #35	C4orf3 (ENSCWAG00000017402) #36	USP53 (ENSCWAG00000017367) #37
Artiodactyla_a	ANCESTRAL SPECIES	12	ENSGT00390000001301 #7	ENSGT00940000155719.b #9	ENSGT00940000155116.b #10	ENSGT00950000183055.b.a #11	ENSGT00940000157323 #12	ENSGT00390000008458 #13	ENSGT00940000161583 #14	ENSGT00390000008984 #15	ENSGT00940000162309	ENSGT00390000010494 #16	ENSGT00390000003555 #17	ENSGT00940000156842 #18	ENSGT00640000091487 #19	ENSGT01060000248588.a.c.b #20	ENSGT00390000012346 #21	ENSGT00940000155372 #22	ENSGT00950000183130.A #23	ENSGT01010000222815	ENSGT00640000091653 #24	ENSGT00940000155988 #25	ENSGT01070000253744.a.b #27	ENSGT00510000046908.a.a.b #28	ENSGT00390000007586.a.b #29	ENSGT00940000158340 #30	ENSGT00940000153395.a #32	ENSGT00940000163685	ENSGT00940000155475 #33	ENSGT00800000124172 #35	ENSGT00530000064570 #36	ENSGT00940000156337 #37	ENSGT00950000183027.b
Camelidae	ANCESTRAL SPECIES	20	ENSGT00940000160648	ENSGT00390000001301 #7	ENSGT00940000155719.b #9	ENSGT00940000155116.b #10	ENSGT00950000183055.b.a #11	ENSGT00940000157323 #12	ENSGT00390000008458 #13	ENSGT00940000161583 #14	ENSGT00940000162309	ENSGT00390000010494 #16	ENSGT00390000003555 #17	ENSGT00940000156842 #18	ENSGT00640000091487 #19	ENSGT01060000248588.a.c.b #20	ENSGT00390000012346 #21	ENSGT00940000155372 #22	ENSGT00950000183130.A #23	ENSGT01010000222815	ENSGT00640000091653 #24	ENSGT00940000155988 #25	ENSGT01070000253744.a.b #27	ENSGT00510000046908.a.a.b #28	ENSGT00390000007586.a.b #29	ENSGT00940000158340 #30	ENSGT00940000153395.a #32	ENSGT00940000155475 #33	ENSGT00800000124172 #35	ENSGT00530000064570 #36	ENSGT00940000156337 #37	ENSGT00950000183027.b	ENSGT00950000183054.a.a.a
Alpaca	MODERN SPECIES	1570														TRPC3 (ENSVPAG00000012113) #20	BBS7 (ENSVPAG00000012112) #21	CCNA2 (ENSVPAG00000012111) #22	EXOSC9 (ENSVPAG00000012110) #23	ANXA5 (ENSVPAG00000012108) #25
Arabian camel	MODERN SPECIES	11	SLC25A31 (ENSCDRG00005002617)	INTU (ENSCDRG00005002628) #7	FAT4 (ENSCDRG00005002656) #9	ANKRD50 (ENSCDRG00005002705) #10	SPRY1 (ENSCDRG00005002718) #11	SPATA5 (ENSCDRG00005002741) #12	NUDT6 (ENSCDRG00005002809) #13	FGF2 (ENSCDRG00005002828) #14	ENSCDRG00005002842	IL21 (ENSCDRG00005002864) #16	IL2 (ENSCDRG00005002894) #17	ADAD1 (ENSCDRG00005002907) #18	BLTP1 (ENSCDRG00005002954) #19	TRPC3 (ENSCDRG00005003132) #20	BBS7 (ENSCDRG00005003165) #21	CCNA2 (ENSCDRG00005003183) #22	EXOSC9 (ENSCDRG00005003201) #23	SMIM43 (ENSCDRG00005003220)	ENSCDRG00005003231 #24	ANXA5 (ENSCDRG00005003256) #25	ENSCDRG00005003320	ENSCDRG00005003330	ENSCDRG00005003346	QRFPR (ENSCDRG00005003358) #27	TNIP3 (ENSCDRG00005003398) #28	NDNF (ENSCDRG00005003482) #29	PRDM5 (ENSCDRG00005003544) #30	MAD2L1 (ENSCDRG00005003818) #32	PDE5A (ENSCDRG00005003851) #33	FABP2 (ENSCDRG00005003970) #35	ENSCDRG00005004009 #36
Artiodactyla_b	ANCESTRAL SPECIES	16	ENSGT00390000001301 #7	ENSGT00940000155719.b #9	ENSGT00940000155116.b #10	ENSGT00950000183055.b.a #11	ENSGT00940000157323 #12	ENSGT00390000008458 #13	ENSGT00940000161583 #14	ENSGT00390000008984 #15	ENSGT00940000162309	ENSGT00390000010494 #16	ENSGT00390000003555 #17	ENSGT00940000156842 #18	ENSGT00640000091487 #19	ENSGT01060000248588.a.c.b #20	ENSGT00390000012346 #21	ENSGT00940000155372 #22	ENSGT00950000183130.A #23	ENSGT01010000222815	ENSGT00940000155988 #25	ENSGT01070000253744.a.b #27	ENSGT00510000046908.a.a.b #28	ENSGT00390000007586.a.b #29	ENSGT00940000158340 #30	ENSGT00940000153395.a #32	ENSGT00940000163685	ENSGT00940000155475 #33	ENSGT00800000124172 #35	ENSGT00530000064570 #36	ENSGT00940000156337 #37	ENSGT00950000183027.b	ENSGT00950000183054.a.a.a
Cetacea	ANCESTRAL SPECIES	12	ENSGT00390000001301 #7	ENSGT00940000155719.b #9	ENSGT00940000155116.b #10	ENSGT00950000183055.b.a #11	ENSGT00940000157323 #12	ENSGT00390000008458 #13	ENSGT00940000161583 #14	ENSGT00390000008984 #15	ENSGT00940000162309	ENSGT00390000010494 #16	ENSGT00390000003555 #17	ENSGT00940000156842 #18	ENSGT00640000091487 #19	ENSGT01060000248588.a.c.b #20	ENSGT00390000012346 #21	ENSGT00940000155372 #22	ENSGT00950000183130.A #23	ENSGT01010000222815	ENSGT00940000155988 #25	ENSGT00510000046908.a.a.b #28	ENSGT00390000007586.a.b #29	ENSGT00940000158340 #30	ENSGT00910000148620.c.a	ENSGT00390000009426.c.a.a.b	ENSGT00940000153395.a #32	ENSGT00940000155475 #33	ENSGT00800000124172 #35	ENSGT00530000064570 #36	ENSGT00940000156337 #37	ENSGT00950000183027.b	ENSGT00950000183054.a.a.a
Odontoceti	ANCESTRAL SPECIES	11	ENSGT00940000154295.b	ENSGT00940000155719.b #9	ENSGT00940000155116.b #10	ENSGT00950000183055.b.a #11	ENSGT00940000157323 #12	ENSGT00390000008458 #13	ENSGT00940000161583 #14	ENSGT00390000008984 #15	ENSGT00940000162309	ENSGT00390000010494 #16	ENSGT00390000003555 #17	ENSGT00940000156842 #18	ENSGT00640000091487 #19	ENSGT01060000248588.a.c.b #20	ENSGT00390000012346 #21	ENSGT00940000155372 #22	ENSGT00950000183130.A #23	ENSGT01010000222815	ENSGT00940000155988 #25	ENSGT00510000046908.a.a.b #28	ENSGT00390000002565.y.b	ENSGT00390000007586.a.b #29	ENSGT00940000158340 #30	ENSGT00910000148620.c.a	ENSGT00390000009426.c.a.a.b	ENSGT00940000153395.a #32	ENSGT00940000155475 #33	ENSGT00800000124172 #35	ENSGT00530000064570 #36	ENSGT00940000156337 #37	ENSGT00950000183027.b
Odontoceti_a	ANCESTRAL SPECIES	22	ENSGT00940000154295.b	ENSGT00940000155719.b #9	ENSGT00940000155116.b #10	ENSGT00950000183055.b.a #11	ENSGT00940000157323 #12	ENSGT00390000008458 #13	ENSGT00940000161583 #14	ENSGT00390000008984 #15	ENSGT00940000162309	ENSGT00390000010494 #16	ENSGT00390000003555 #17	ENSGT00940000156842 #18	ENSGT00640000091487 #19	ENSGT01060000248588.a.c.b #20	ENSGT00390000012346 #21	ENSGT00940000155372 #22	ENSGT00950000183130.A #23	ENSGT01010000222815	ENSGT00940000155988 #25	ENSGT00510000046908.a.a.b #28	ENSGT00390000002565.y.b	ENSGT00390000007586.a.b #29	ENSGT00940000158340 #30	ENSGT00910000148620.c.a	ENSGT00390000009426.c.a.a.b	ENSGT00940000153395.a #32	ENSGT00940000155475 #33	ENSGT00800000124172 #35	ENSGT00530000064570 #36	ENSGT00940000156337 #37	ENSGT00950000183027.b
Odontoceti_b	ANCESTRAL SPECIES	11	ENSGT00940000154295.b	ENSGT00940000155719.b #9	ENSGT00940000155116.b #10	ENSGT00950000183055.b.a #11	ENSGT00940000157323 #12	ENSGT00390000008458 #13	ENSGT00940000161583 #14	ENSGT00390000008984 #15	ENSGT00940000162309	ENSGT00390000010494 #16	ENSGT00390000003555 #17	ENSGT00940000156842 #18	ENSGT00640000091487 #19	ENSGT01060000248588.a.c.b #20	ENSGT00390000012346 #21	ENSGT00940000155372 #22	ENSGT00950000183130.A #23	ENSGT01010000222815	ENSGT00940000155988 #25	ENSGT00510000046908.a.a.b #28	ENSGT00390000002565.y.b	ENSGT00390000007586.a.b #29	ENSGT00940000158340 #30	ENSGT00910000148620.c.a	ENSGT00390000009426.c.a.a.b	ENSGT00940000153395.a #32	ENSGT00940000155475 #33	ENSGT00800000124172 #35	ENSGT00530000064570 #36	ENSGT00940000156337 #37	ENSGT00950000183027.b
Monodontidae	ANCESTRAL SPECIES	9	ENSGT00940000154295.b	ENSGT00940000155719.b #9	ENSGT00940000155116.b #10	ENSGT00950000183055.b.a #11	ENSGT00940000157323 #12	ENSGT00390000008458 #13	ENSGT00940000161583 #14	ENSGT00390000008984 #15	ENSGT00940000162309	ENSGT00390000010494 #16	ENSGT00390000003555 #17	ENSGT00940000156842 #18	ENSGT00640000091487.ad #19	ENSGT01060000248588.a.c.b #20	ENSGT00390000012346 #21	ENSGT00940000155372 #22	ENSGT00950000183130.A #23	ENSGT01010000222815	ENSGT00940000155988 #25	ENSGT00510000046908.a.a.b #28	ENSGT00390000002565.y.b	ENSGT00390000007586.a.b #29	ENSGT00940000158340 #30	ENSGT00910000148620.c.a	ENSGT00390000009426.c.a.a.b	ENSGT00940000153395.a #32	ENSGT00940000155475 #33	ENSGT00800000124172 #35	ENSGT00530000064570 #36	ENSGT00940000156337 #37	ENSGT00950000183027.b
Narwhal	MODERN SPECIES	307	ENSMMNG00015012960	FAT4 (ENSMMNG00015012936) #9	ANKRD50 (ENSMMNG00015012917) #10	SPRY1 (ENSMMNG00015012912) #11	SPATA5 (ENSMMNG00015012897) #12	NUDT6 (ENSMMNG00015012877) #13	FGF2 (ENSMMNG00015012869) #14	BBS12 (ENSMMNG00015012864) #15	ENSMMNG00015012856	IL21 (ENSMMNG00015012833) #16	IL2 (ENSMMNG00015012821) #17	ADAD1 (ENSMMNG00015012746) #18	BLTP1 (ENSMMNG00015012698) #19	TRPC3 (ENSMMNG00015012648) #20	BBS7 (ENSMMNG00015012614) #21	CCNA2 (ENSMMNG00015012604) #22	EXOSC9 (ENSMMNG00015012542) #23	SMIM43 (ENSMMNG00015012533)	ANXA5 (ENSMMNG00015012485) #25	TNIP3 (ENSMMNG00015012386) #28	ENSMMNG00015012337	NDNF (ENSMMNG00015012321) #29	PRDM5 (ENSMMNG00015012286) #30	ENSMMNG00015012245	ENSMMNG00015012236	ENSMMNG00015012226 #32	PDE5A (ENSMMNG00015012174) #33	FABP2 (ENSMMNG00015012147) #35	ENSMMNG00015012139 #36	USP53 (ENSMMNG00015012113) #37	MYOZ2 (ENSMMNG00015012102)
Beluga whale	MODERN SPECIES	77	ANKRD50 (ENSDLEG00000018579) #10	SPRY1 (ENSDLEG00000018569) #11	SPATA5 (ENSDLEG00000018536) #12	NUDT6 (ENSDLEG00000018532) #13	FGF2 (ENSDLEG00000018525) #14	BBS12 (ENSDLEG00000018520) #15	ENSDLEG00000018510	IL21 (ENSDLEG00000018492) #16	IL2 (ENSDLEG00000018482) #17	ADAD1 (ENSDLEG00000018452) #18	ENSDLEG00000018445 #19	ENSDLEG00000018435 #19	ENSDLEG00000018219 #19	TRPC3 (ENSDLEG00000016853) #20	BBS7 (ENSDLEG00000016585) #21	CCNA2 (ENSDLEG00000016535) #22	EXOSC9 (ENSDLEG00000016426) #23	ANXA5 (ENSDLEG00000016410) #25	ENSDLEG00000016406	TNIP3 (ENSDLEG00000016363) #28	ENSDLEG00000016349	NDNF (ENSDLEG00000016335) #29	PRDM5 (ENSDLEG00000016267) #30	ENSDLEG00000016246	ENSDLEG00000016241	MAD2L1 (ENSDLEG00000020615) #32	PDE5A (ENSDLEG00000020593) #33	FABP2 (ENSDLEG00000020585) #35	ENSDLEG00000020580 #36	USP53 (ENSDLEG00000020573) #37	MYOZ2 (ENSDLEG00000020565)
Vaquita	MODERN SPECIES	16	INTU (ENSPSNG00000003692) #7	ENSPSNG00000003709	FAT4 (ENSPSNG00000003757) #9	ANKRD50 (ENSPSNG00000003834) #10	SPRY1 (ENSPSNG00000003854) #11	SPATA5 (ENSPSNG00000003870) #12	NUDT6 (ENSPSNG00000003910) #13	FGF2 (ENSPSNG00000003926) #14	BBS12 (ENSPSNG00000003945) #15	IL21 (ENSPSNG00000003956) #16	IL2 (ENSPSNG00000003969) #17	ADAD1 (ENSPSNG00000003989) #18	BLTP1 (ENSPSNG00000004043) #19	TRPC3 (ENSPSNG00000004096) #20	BBS7 (ENSPSNG00000004127) #21	CCNA2 (ENSPSNG00000004155) #22	EXOSC9 (ENSPSNG00000004184) #23	ANXA5 (ENSPSNG00000004276) #25	TNIP3 (ENSPSNG00000004388) #28	ENSPSNG00000000082	NDNF (ENSPSNG00000000138) #29	PRDM5 (ENSPSNG00000000220) #30	ENSPSNG00000000302	ENSPSNG00000000332	ENSPSNG00000000358	ENSPSNG00000000376 #32	PDE5A (ENSPSNG00000000435) #33	FABP2 (ENSPSNG00000000497) #35	USP53 (ENSPSNG00000000534) #37	MYOZ2 (ENSPSNG00000000556)	SYNPO2 (ENSPSNG00000000581)
Dolphin	MODERN SPECIES	1499														TRPC3 (ENSTTRG00000001588) #20	BBS7 (ENSTTRG00000001587) #21	CCNA2 (ENSTTRG00000001586) #22	EXOSC9 (ENSTTRG00000001584) #23
Sperm whale	MODERN SPECIES	18	ENSPCTG00005010819	FAT4 (ENSPCTG00005010603) #9	ENSPCTG00005010542	ANKRD50 (ENSPCTG00005010483) #10	SPRY1 (ENSPCTG00005010468) #11	SPATA5 (ENSPCTG00005010245) #12	NUDT6 (ENSPCTG00005010197) #13	FGF2 (ENSPCTG00005010153) #14	BBS12 (ENSPCTG00005010097) #15	IL21 (ENSPCTG00005009983) #16	IL2 (ENSPCTG00005009921) #17	ADAD1 (ENSPCTG00005009621) #18	BLTP1 (ENSPCTG00005009212) #19	TRPC3 (ENSPCTG00005008873) #20	BBS7 (ENSPCTG00005008739) #21	CCNA2 (ENSPCTG00005007992) #22	EXOSC9 (ENSPCTG00005007921) #23	SMIM43 (ENSPCTG00005007906)	ANXA5 (ENSPCTG00005007686) #25	TNIP3 (ENSPCTG00005007509) #28	ENSPCTG00005007478	NDNF (ENSPCTG00005007456) #29	PRDM5 (ENSPCTG00005007313) #30	ENSPCTG00005007264	ENSPCTG00005007256	ENSPCTG00005007246	MAD2L1 (ENSPCTG00005007227) #32	PDE5A (ENSPCTG00005007066) #33	FABP2 (ENSPCTG00005007038) #35	ENSPCTG00005007026 #36	USP53 (ENSPCTG00005006925) #37
Blue whale	MODERN SPECIES	16	SLC25A31 (ENSBMSG00010005936)	INTU (ENSBMSG00010005915) #7	ENSBMSG00010005904	ANKRD50 (ENSBMSG00010005838) #10	SPRY1 (ENSBMSG00010005827) #11	SPATA5 (ENSBMSG00010005792) #12	NUDT6 (ENSBMSG00010005764) #13	FGF2 (ENSBMSG00010005746) #14	BBS12 (ENSBMSG00010005736) #15	IL21 (ENSBMSG00010005700) #16	IL2 (ENSBMSG00010005690) #17	ADAD1 (ENSBMSG00010005604) #18	ENSBMSG00010005547 #19	TRPC3 (ENSBMSG00010005468) #20	BBS7 (ENSBMSG00010005400) #21	CCNA2 (ENSBMSG00010005376) #22	EXOSC9 (ENSBMSG00010005282) #23	SMIM43 (ENSBMSG00010005275)	ANXA5 (ENSBMSG00010005230) #25	TNIP3 (ENSBMSG00010005122) #28	NDNF (ENSBMSG00010005099) #29	PRDM5 (ENSBMSG00010005080) #30	ENSBMSG00010022593	ENSBMSG00010022592	MAD2L1 (ENSBMSG00010022591) #32	PDE5A (ENSBMSG00010022590) #33	FABP2 (ENSBMSG00010022589) #35	ENSBMSG00010022588 #36	USP53 (ENSBMSG00010022587) #37	ENSBMSG00010022586	MYOZ2 (ENSBMSG00010022585)
Pecora	ANCESTRAL SPECIES	15							ENSGT01100000263802	ENSGT00770000121728	ENSGT00940000159346	ENSGT00390000004179	ENSGT00940000161969	ENSGT00940000161766	ENSGT00940000160268	ENSGT00390000004697	ENSGT00390000012346 #21	ENSGT00940000155372 #22	ENSGT00950000183130.A #23	ENSGT01010000222815	ENSGT00940000155988 #25	ENSGT01070000253744.a.b #27	ENSGT00510000046908.a.a.b #28	ENSGT00390000007586.a.b #29	ENSGT00940000158340 #30	ENSGT00940000153395.a #32	ENSGT00940000163685	ENSGT00940000155475 #33	ENSGT00800000124172 #35	ENSGT00530000064570 #36	ENSGT00940000156337 #37	ENSGT00950000183027.b	ENSGT00950000183054.a.a.a
Yarkand deer	MODERN SPECIES	8							ENSCHYG00000015507	SMIM31 (ENSCHYG00000015554)	MARCHF1 (ENSCHYG00000015629)	TMA16 (ENSCHYG00000015932)	TKTL2 (ENSCHYG00000016177)	NPY5R (ENSCHYG00000016193)	NPY1R (ENSCHYG00000016224)	NAF1 (ENSCHYG00000016276)	BBS7 (ENSCHYG00000016446) #21	CCNA2 (ENSCHYG00000016601) #22	ENSCHYG00000016813 #23	ENSCHYG00000016979 #24	ENSCHYG00000017051 #25	QRFPR (ENSCHYG00000017586) #27	TNIP3 (ENSCHYG00000017670) #28	NDNF (ENSCHYG00000017920) #29	PRDM5 (ENSCHYG00000018062) #30	ENSCHYG00000018636	ENSCHYG00000018659	PDE5A (ENSCHYG00000018720) #33	FABP2 (ENSCHYG00000019259) #35	ENSCHYG00000019324	C4orf3 (ENSCHYG00000019350) #36	USP53 (ENSCHYG00000019385) #37	MYOZ2 (ENSCHYG00000019531)
Percora_a	ANCESTRAL SPECIES	18							ENSGT01100000263802	ENSGT00770000121728	ENSGT00940000159346	ENSGT00390000004179	ENSGT00940000161969	ENSGT00940000161766	ENSGT00940000160268	ENSGT00390000004697	ENSGT00390000012346 #21	ENSGT00940000155372 #22	ENSGT00950000183130.A #23	ENSGT01010000222815	ENSGT00940000155988 #25	ENSGT01070000253744.a.b #27	ENSGT00510000046908.a.a.b #28	ENSGT00390000007586.a.b #29	ENSGT00940000158340 #30	ENSGT00940000153395.a #32	ENSGT00940000163685	ENSGT00940000155475 #33	ENSGT00800000124172 #35	ENSGT00530000064570 #36	ENSGT00940000156337 #37	ENSGT00950000183027.b	ENSGT00950000183054.a.a.a
Siberian musk deer	MODERN SPECIES	1271								ENSMMSG00000018599	MARCHF1 (ENSMMSG00000018482)	TMA16 (ENSMMSG00000018436)	TKTL2 (ENSMMSG00000018406)	NPY5R (ENSMMSG00000018382)	NPY1R (ENSMMSG00000018359)	ENSMMSG00000018339	BBS7 (ENSMMSG00000018260) #21	CCNA2 (ENSMMSG00000018221) #22	EXOSC9 (ENSMMSG00000018147) #23	SMIM43 (ENSMMSG00000018134)	ENSMMSG00000018019	ANXA5 (ENSMMSG00000017820) #25	QRFPR (ENSMMSG00000017721) #27	TNIP3 (ENSMMSG00000017595) #28	NDNF (ENSMMSG00000017569) #29	ENSMMSG00000017498 #30	MAD2L1 (ENSMMSG00000017450) #32	ENSMMSG00000017396	PDE5A (ENSMMSG00000017279) #33	FABP2 (ENSMMSG00000017233) #35	ENSMMSG00000017213 #36	USP53 (ENSMMSG00000017172) #37	MYOZ2 (ENSMMSG00000017140)
Bovidae	ANCESTRAL SPECIES	18							ENSGT01100000263802	ENSGT00770000121728	ENSGT00940000159346	ENSGT00390000004179	ENSGT00940000161969	ENSGT00940000161766	ENSGT00940000160268	ENSGT00390000004697	ENSGT00390000012346 #21	ENSGT00940000155372 #22	ENSGT00950000183130.A #23	ENSGT01010000222815	ENSGT00940000155988 #25	ENSGT01070000253744.a.b #27	ENSGT00510000046908.a.a.b #28	ENSGT00390000007586.a.b #29	ENSGT00940000158340 #30	ENSGT00940000153395.a #32	ENSGT00940000163685	ENSGT00940000155475 #33	ENSGT00800000124172 #35	ENSGT00530000064570 #36	ENSGT00940000156337 #37	ENSGT00950000183027.b	ENSGT00950000183054.a.a.a
Caprinae	ANCESTRAL SPECIES	13							ENSGT01100000263802	ENSGT00770000121728	ENSGT00940000159346	ENSGT00390000004179	ENSGT00940000161969	ENSGT00940000161766	ENSGT00940000160268	ENSGT00390000004697	ENSGT00390000012346 #21	ENSGT00940000155372 #22	ENSGT00950000183130.A #23	ENSGT01010000222815	ENSGT00940000155988 #25	ENSGT01070000253744.a.b #27	ENSGT00510000046908.a.a.b #28	ENSGT00390000007586.a.b #29	ENSGT00940000158340 #30	ENSGT00940000153395.a #32	ENSGT00940000163685.d	ENSGT00940000155475 #33	ENSGT00800000124172 #35	ENSGT00530000064570.m #36	ENSGT00940000156337 #37	ENSGT00950000183027.b	ENSGT00950000183054.a.a.a
Goat	MODERN SPECIES	25						ENSCHIG00000024529	ENSCHIG00000016477	ENSCHIG00000013370	ENSCHIG00000023590	TMA16 (ENSCHIG00000014354)	TKTL2 (ENSCHIG00000014778)	NPY5R (ENSCHIG00000026205)	NPY1R (ENSCHIG00000012293)	NAF1 (ENSCHIG00000018430)	BBS7 (ENSCHIG00000021804) #21	CCNA2 (ENSCHIG00000017736) #22	EXOSC9 (ENSCHIG00000018091) #23	ANXA5 (ENSCHIG00000021759) #25	ENSCHIG00000015856	QRFPR (ENSCHIG00000026596) #27	TNIP3 (ENSCHIG00000014328) #28	NDNF (ENSCHIG00000017486) #29	PRDM5 (ENSCHIG00000018772) #30	MAD2L1 (ENSCHIG00000025057) #32	ENSCHIG00000013097	PDE5A (ENSCHIG00000023222) #33	FABP2 (ENSCHIG00000022035) #35	ENSCHIG00000001816 #36	USP53 (ENSCHIG00000013642) #37	MYOZ2 (ENSCHIG00000012778)	SYNPO2 (ENSCHIG00000022266)
Rambouillet Sheep	MODERN SPECIES	22					ENSOARG00020021694	ENSOARG00020021727	ENSOARG00020021754	ENSOARG00020021780	TMA16 (ENSOARG00020021969)	TKTL2 (ENSOARG00020022023)	NPY5R (ENSOARG00020022048)	ENSOARG00020022062	NPY1R (ENSOARG00020022088)	NAF1 (ENSOARG00020022192)	BBS7 (ENSOARG00020022348) #21	CCNA2 (ENSOARG00020022697) #22	EXOSC9 (ENSOARG00020022752) #23	SMIM43 (ENSOARG00020022984)	ENSOARG00020022998	ENSOARG00020023043 #25	QRFPR (ENSOARG00020023156) #27	NDNF (ENSOARG00020023214) #29	PRDM5 (ENSOARG00020009876) #30	ENSOARG00020010290 #32	ENSOARG00020010353	MAD2L1 (ENSOARG00020010433) #32	ENSOARG00020010607	ENSOARG00020010653	ENSOARG00020010708	PDE5A (ENSOARG00020010829) #33	FABP2 (ENSOARG00020011627) #35
Bovinae	ANCESTRAL SPECIES	15							ENSGT01100000263802	ENSGT00770000121728	ENSGT00940000159346	ENSGT00390000004179	ENSGT00940000161969	ENSGT00940000161766	ENSGT00940000160268	ENSGT00390000004697	ENSGT00390000012346 #21	ENSGT00940000155372 #22	ENSGT00950000183130.A #23	ENSGT01010000222815	ENSGT00940000155988 #25	ENSGT01070000253744.a.b #27	ENSGT00510000046908.a.a.b #28	ENSGT00390000007586.a.b #29	ENSGT00940000158340 #30	ENSGT00940000153395.a #32	ENSGT00940000163685	ENSGT00940000155475 #33	ENSGT00800000124172 #35	ENSGT00530000064570 #36	ENSGT00940000156337 #37	ENSGT00950000183027.b	ENSGT00950000183054.a.a.a
American bison	MODERN SPECIES	3299									ENSBBBG00000007492	TMA16 (ENSBBBG00000003389)	TKTL2 (ENSBBBG00000003390)	NPY5R (ENSBBBG00000014527)	NPY1R (ENSBBBG00000003398)	ENSBBBG00000014533	BBS7 (ENSBBBG00000007128) #21	CCNA2 (ENSBBBG00000002866) #22	EXOSC9 (ENSBBBG00000014573) #23	SMIM43 (ENSBBBG00000008152)	ANXA5 (ENSBBBG00000003556) #25	ENSBBBG00000014678	QRFPR (ENSBBBG00000014690) #27	TNIP3 (ENSBBBG00000014735) #28	NDNF (ENSBBBG00000014746) #29	PRDM5 (ENSBBBG00000014823) #30
Bos	ANCESTRAL SPECIES	15							ENSGT01100000263802	ENSGT00770000121728	ENSGT00940000159346	ENSGT00390000004179	ENSGT00940000161969	ENSGT00940000161766	ENSGT00940000160268	ENSGT00390000004697	ENSGT00390000012346 #21	ENSGT00940000155372 #22	ENSGT00950000183130.A #23	ENSGT01010000222815	ENSGT00940000155988 #25	ENSGT01070000253744.a.b #27	ENSGT00510000046908.a.a.b #28	ENSGT00390000007586.a.b #29	ENSGT00940000158340 #30	ENSGT00940000153395.a.hb.a #32	ENSGT00940000163685.a	ENSGT00940000155475 #33	ENSGT00800000124172 #35	ENSGT00530000064570 #36	ENSGT00940000156337 #37	ENSGT00950000183027.b	ENSGT00950000183054.a.a.a
Bos_b	DUPLICATION
Bos_b	ANCESTRAL SPECIES	14								ENSGT01100000263802	ENSGT00940000159346	ENSGT00390000004179	ENSGT00940000161969	ENSGT00940000161766	ENSGT00940000160268	ENSGT00390000004697	ENSGT00390000012346 #21	ENSGT00940000155372.g #22	ENSGT00950000183130.A #23	ENSGT01010000222815	ENSGT00940000155988 #25	ENSGT01070000253744.a.b #27	ENSGT00510000046908.a.a.b #28	ENSGT00390000007586.a.b #29	ENSGT00940000158340 #30	ENSGT00940000153395.a.hb.a #32	ENSGT00940000163685.a	ENSGT00940000155475 #33	ENSGT00800000124172.g #35	ENSGT00530000064570 #36	ENSGT00940000156337 #37	ENSGT00950000183027.b	ENSGT00950000183054.a.a.a
Hybrid Bos Indicus	MODERN SPECIES	25				ENSBIXG00005030055	ENSBIXG00005030075	ENSBIXG00005005235	ENSBIXG00005001717	ENSBIXG00005029169	MARCHF1 (ENSBIXG00005001795)	TMA16 (ENSBIXG00005029141)	TKTL2 (ENSBIXG00005001863)	NPY5R (ENSBIXG00005005169)	NPY1R (ENSBIXG00005005160)	NAF1 (ENSBIXG00005029085)	BBS7 (ENSBIXG00005029038) #21	ENSBIXG00005028983 #22	EXOSC9 (ENSBIXG00005028975) #23	SMIM43 (ENSBIXG00005005080)	ANXA5 (ENSBIXG00005005069) #25	QRFPR (ENSBIXG00005028780) #27	TNIP3 (ENSBIXG00005028738) #28	NDNF (ENSBIXG00005002378) #29	PRDM5 (ENSBIXG00005028611) #30	ENSBIXG00005028491 #32	ENSBIXG00005006635	ENSBIXG00005028397	PDE5A (ENSBIXG00005028330) #33	ENSBIXG00005028196 #35	C4orf3 (ENSBIXG00005028168) #36	USP53 (ENSBIXG00005006630) #37	MYOZ2 (ENSBIXG00005027989)
Cow	MODERN SPECIES	25						ENSBTAG00000048001	APELA (ENSBTAG00000053871)	ENSBTAG00000032764	MARCHF1 (ENSBTAG00000044082)	TMA16 (ENSBTAG00000012658)	TKTL2 (ENSBTAG00000008947)	NPY5R (ENSBTAG00000038421)	NPY1R (ENSBTAG00000047586)	NAF1 (ENSBTAG00000034700)	BBS7 (ENSBTAG00000004945) #21	CCNA2 (ENSBTAG00000004943) #22	EXOSC9 (ENSBTAG00000004942) #23	ANXA5 (ENSBTAG00000021746) #25	QRFPR (ENSBTAG00000008255) #27	NDNF (ENSBTAG00000010634) #29	PRDM5 (ENSBTAG00000012111) #30	PDE5A (ENSBTAG00000024888) #33	FABP2 (ENSBTAG00000017045) #35	C6H4orf3 (ENSBTAG00000048273) #36	USP53 (ENSBTAG00000010350) #37	MYOZ2 (ENSBTAG00000002574)	SYNPO2 (ENSBTAG00000006434)	SEC24D (ENSBTAG00000003619)	METTL14 (ENSBTAG00000014080)	PRSS12 (ENSBTAG00000020705)	NDST3 (ENSBTAG00000007316)
Bos_b	ANCESTRAL SPECIES																	ENSGT00940000155372.h #22
Hybrid Bos Indicus	MODERN SPECIES	23	ENSBIXG00005010334	GSTK1 (ENSBIXG00005010396)	TMEM139 (ENSBIXG00005010434)	CASP2 (ENSBIXG00005010484)	CLCN1 (ENSBIXG00005000686)	FAM131B (ENSBIXG00005000657)	ZYX (ENSBIXG00005010659)	EPHA1 (ENSBIXG00005010711)	TAS2R60 (ENSBIXG00005000625)	TAS2R41 (ENSBIXG00005010737)	ENSBIXG00005010748	TCAF1 (ENSBIXG00005010796)	ENSBIXG00005010821	OR2A14 (ENSBIXG00005000956)	ENSBIXG00005010864	ENSBIXG00005010877 #22	ENSBIXG00005000967	ENSBIXG00005010917	ENSBIXG00005000575	ENSBIXG00005010959	ARHGEF5 (ENSBIXG00005011019)	ENSBIXG00005011107	CNTNAP2 (ENSBIXG00005011304)	CUL1 (ENSBIXG00005011500)	EZH2 (ENSBIXG00005011741)	ENSBIXG00005006326	PDIA4 (ENSBIXG00005011823)	ZNF786 (ENSBIXG00005011847)	ZNF398 (ENSBIXG00005011884)	ZNF282 (ENSBIXG00005011919)	ZNF783 (ENSBIXG00005011998)
Bos_a	ANCESTRAL SPECIES	33							ENSGT01100000263802	ENSGT00770000121728	ENSGT00940000159346	ENSGT00390000004179	ENSGT00940000161969	ENSGT00940000161766	ENSGT00940000160268	ENSGT00390000004697	ENSGT00390000012346 #21	ENSGT00940000155372 #22	ENSGT00950000183130.A #23	ENSGT00940000155988.k #25	ENSGT01010000222815	ENSGT00940000155988.l #25	ENSGT01070000253744.a.b #27	ENSGT00510000046908.a.a.b #28	ENSGT00390000007586.a.b #29	ENSGT00940000158340 #30	ENSGT00940000155475 #33	ENSGT00530000064570 #36	ENSGT00940000156337 #37	ENSGT00950000183027.b	ENSGT00950000183054.a.a.a	ENSGT00950000182924.A.b.a.b	ENSGT00550000075003
Domestic yak	MODERN SPECIES	25			ENSBGRG00000005696	SMIM31 (ENSBGRG00000005677)	ENSBGRG00000005629	ENSBGRG00000005607	ENSBGRG00000005590	ENSBGRG00000005585	MARCHF1 (ENSBGRG00000005488)	TMA16 (ENSBGRG00000005375)	TKTL2 (ENSBGRG00000005351)	NPY5R (ENSBGRG00000005333)	NPY1R (ENSBGRG00000005303)	NAF1 (ENSBGRG00000007068)	BBS7 (ENSBGRG00000006822) #21	CCNA2 (ENSBGRG00000006747) #22	EXOSC9 (ENSBGRG00000006587) #23	SMIM43 (ENSBGRG00000006568)	ENSBGRG00000006272 #25	ENSBGRG00000006249	QRFPR (ENSBGRG00000006193) #27	TNIP3 (ENSBGRG00000005802) #28	NDNF (ENSBGRG00000005750) #29	PRDM5 (ENSBGRG00000005459) #30	ENSBGRG00000005429	PDE5A (ENSBGRG00000005023) #33	ENSBGRG00000004956	ENSBGRG00000004933 #36	USP53 (ENSBGRG00000004871) #37	MYOZ2 (ENSBGRG00000004836)	SYNPO2 (ENSBGRG00000004790)
Wild yak	DUPLICATION
Wild yak	MODERN SPECIES	24		TCAF1 (ENSBMUG00000013807)	ENSBMUG00000013820	ENSBMUG00000013826	ENSBMUG00000013837	ENSBMUG00000013844	ENSBMUG00000013855	ENSBMUG00000013868	OR6B1 (ENSBMUG00000013882)	OR2A5 (ENSBMUG00000013892)	OR2A25 (ENSBMUG00000013901)	OR2A12 (ENSBMUG00000013914)	ENSBMUG00000013929	ENSBMUG00000013933	OR2A2 (ENSBMUG00000013942)	ENSBMUG00000013952 #22	ENSBMUG00000013967	HEYL (ENSBMUG00000013975)	NT5C1A (ENSBMUG00000013984)	HPCAL4 (ENSBMUG00000013997)
Wild yak	MODERN SPECIES	473												NPY5R (ENSBMUG00000023182)	NPY1R (ENSBMUG00000023192)	ENSBMUG00000023206	BBS7 (ENSBMUG00000023247) #21	CCNA2 (ENSBMUG00000000074) #22	EXOSC9 (ENSBMUG00000000096) #23	ANXA5 (ENSBMUG00000000244) #25
Laurasiatheria_b	ANCESTRAL SPECIES	8	ENSGT00390000001301 #7	ENSGT00940000155719.b #9	ENSGT00940000155116.b #10	ENSGT00950000183055.b.a #11	ENSGT00940000157323 #12	ENSGT00390000008458 #13	ENSGT00940000161583 #14	ENSGT00390000008984 #15	ENSGT00940000162309	ENSGT00390000010494 #16	ENSGT00390000003555 #17	ENSGT00940000156842 #18	ENSGT00640000091487 #19	ENSGT01060000248588.a.c.b #20	ENSGT00390000012346 #21	ENSGT00940000155372 #22	ENSGT00950000183130.A #23	ENSGT01010000222815	ENSGT00640000091653 #24	ENSGT00940000155988 #25	ENSGT01070000253744.a.b #27	ENSGT00510000046908.a.a.b #28	ENSGT00390000007586.a.b #29	ENSGT00940000158340 #30	ENSGT00940000153395.a #32	ENSGT00940000163685	ENSGT00940000155475 #33	ENSGT00800000124172 #35	ENSGT00530000064570 #36	ENSGT00940000156337 #37	ENSGT00950000183027.b
Carnivora	ANCESTRAL SPECIES	5	ENSGT00390000001301 #7	ENSGT00940000155719.b #9	ENSGT00940000155116.b #10	ENSGT00950000183055.b.a #11	ENSGT00940000157323 #12	ENSGT00390000008458 #13	ENSGT00940000161583 #14	ENSGT00390000008984 #15	ENSGT00940000162309	ENSGT00390000010494 #16	ENSGT00390000003555 #17	ENSGT00940000156842 #18	ENSGT00640000091487 #19	ENSGT01060000248588.a.c.b #20	ENSGT00390000012346 #21	ENSGT00940000155372 #22	ENSGT00950000183130.A #23	ENSGT01010000222815	ENSGT00940000155988 #25	ENSGT01070000253744.a.b #27	ENSGT00510000046908.a.a.b #28	ENSGT00390000007586.a.b #29	ENSGT00940000158340 #30	ENSGT00940000153395.a #32	ENSGT00940000163685	ENSGT00940000155475 #33	ENSGT00800000124172 #35	ENSGT00530000064570 #36	ENSGT00940000156337 #37	ENSGT00950000183027.b	ENSGT00950000183054.a.a.a
Caniformia	ANCESTRAL SPECIES	7	ENSGT00390000001301 #7	ENSGT00940000155719.b #9	ENSGT00940000155116.b #10	ENSGT00950000183055.b.a #11	ENSGT00940000157323 #12	ENSGT00390000008458 #13	ENSGT00940000161583 #14	ENSGT00390000008984 #15	ENSGT00940000162309	ENSGT00390000010494 #16	ENSGT00390000003555 #17	ENSGT00940000156842 #18	ENSGT00640000091487 #19	ENSGT01060000248588.a.c.b #20	ENSGT00390000012346 #21	ENSGT00940000155372 #22	ENSGT00950000183130.A #23	ENSGT01010000222815	ENSGT00940000155988 #25	ENSGT01070000253744.a.b #27	ENSGT00510000046908.a.a.b #28	ENSGT00390000007586.a.b #29	ENSGT00940000158340 #30	ENSGT00940000153395.a #32	ENSGT00940000163685	ENSGT00940000155475 #33	ENSGT00800000124172 #35	ENSGT00530000064570 #36	ENSGT00940000156337 #37	ENSGT00950000183027.b	ENSGT00950000183054.a.a.a
Caniformia_b	ANCESTRAL SPECIES	5	ENSGT00390000001301 #7	ENSGT00940000155719.b #9	ENSGT00940000155116.b #10	ENSGT00950000183055.b.a #11	ENSGT00940000157323 #12	ENSGT00390000008458 #13	ENSGT00940000161583 #14	ENSGT00390000008984 #15	ENSGT00940000162309	ENSGT00390000010494 #16	ENSGT00390000003555 #17	ENSGT00940000156842 #18	ENSGT00640000091487 #19	ENSGT01060000248588.a.c.b #20	ENSGT00390000012346 #21	ENSGT00940000155372 #22	ENSGT00950000183130.A #23	ENSGT00940000155988 #25	ENSGT01070000253744.a.b #27	ENSGT00510000046908.a.a.b #28	ENSGT00390000007586.a.b #29	ENSGT00940000158340 #30	ENSGT00940000153395.a #32	ENSGT00940000163685	ENSGT00940000155475 #33	ENSGT00800000124172 #35	ENSGT00530000064570 #36	ENSGT00940000156337 #37	ENSGT00950000183027.b	ENSGT00950000183054.a.a.a	ENSGT00950000182924.A.b.a.b
Ursidae	ANCESTRAL SPECIES	17	ENSGT00390000001301 #7	ENSGT00940000155719.b #9	ENSGT00940000155116.b #10	ENSGT00950000183055.b.a #11	ENSGT00940000157323 #12	ENSGT00390000008458 #13	ENSGT00940000161583 #14	ENSGT00390000008984 #15	ENSGT00940000162309	ENSGT00390000010494 #16	ENSGT00390000003555 #17	ENSGT00940000156842 #18	ENSGT00640000091487 #19	ENSGT01060000248588.a.c.b #20	ENSGT00390000012346 #21	ENSGT00940000155372 #22	ENSGT00950000183130.A #23	ENSGT00940000155988.p #25	ENSGT01070000253744.a.b #27	ENSGT00510000046908.a.a.b #28	ENSGT00390000007586.a.b #29	ENSGT00940000158340 #30	ENSGT00940000153395.a #32	ENSGT00940000163685	ENSGT00940000155475 #33	ENSGT00800000124172 #35	ENSGT00530000064570 #36	ENSGT00940000156337 #37	ENSGT00950000183027.b	ENSGT00950000183054.a.a.a	ENSGT00950000182924.A.b.a.b
Ursus	ANCESTRAL SPECIES	74			ENSGT00940000155116.b #10	ENSGT00950000183055.b.a #11	ENSGT00940000157323 #12	ENSGT00390000008458 #13	ENSGT00940000161583 #14	ENSGT00390000008984 #15	ENSGT00940000162309	ENSGT00390000010494 #16	ENSGT00390000003555 #17	ENSGT00940000156842 #18	ENSGT00640000091487 #19	ENSGT01060000248588.a.c.b #20	ENSGT00390000012346 #21	ENSGT00940000155372 #22	ENSGT00950000183130.A #23	ENSGT00940000155988.p #25	ENSGT01070000253744.a.b #27	ENSGT00510000046908.a.a.b #28	ENSGT00390000007586.a.b #29	ENSGT00940000158340 #30	ENSGT00940000153395.a #32	ENSGT00940000163685	ENSGT00940000155475.c #33	ENSGT00800000124172 #35	ENSGT00530000064570 #36	ENSGT00940000156337 #37	ENSGT00950000183027.b	ENSGT00950000183054.a.a.a	ENSGT00950000182924.A.b.a.b
Polar bear	MODERN SPECIES	159		ENSUMAG00000004650 #10	ENSUMAG00000004646 #10	SPRY1 (ENSUMAG00000004634) #11	SPATA5 (ENSUMAG00000004627) #12	NUDT6 (ENSUMAG00000004613) #13	FGF2 (ENSUMAG00000004611) #14	BBS12 (ENSUMAG00000004608) #15	ENSUMAG00000004604	IL21 (ENSUMAG00000004579) #16	IL2 (ENSUMAG00000004523) #17	ADAD1 (ENSUMAG00000004507) #18	BLTP1 (ENSUMAG00000004087) #19	TRPC3 (ENSUMAG00000004005) #20	BBS7 (ENSUMAG00000003887) #21	CCNA2 (ENSUMAG00000003859) #22	EXOSC9 (ENSUMAG00000003848) #23	ANXA5 (ENSUMAG00000003835) #25	QRFPR (ENSUMAG00000003803) #27	TNIP3 (ENSUMAG00000003798) #28	NDNF (ENSUMAG00000003788) #29	PRDM5 (ENSUMAG00000003733) #30	MAD2L1 (ENSUMAG00000003710) #32	ENSUMAG00000003706	PDE5A (ENSUMAG00000003696) #33	FABP2 (ENSUMAG00000003687) #35	C4orf3 (ENSUMAG00000003683) #36	USP53 (ENSUMAG00000003650) #37	MYOZ2 (ENSUMAG00000003636)	SYNPO2 (ENSUMAG00000003620)	SEC24D (ENSUMAG00000003603)
American black bear	MODERN SPECIES	7268																CCNA2 (ENSUAMG00000011143) #22	EXOSC9 (ENSUAMG00000011140) #23
Giant Panda	MODERN SPECIES	15	INTU (ENSAMEG00000002570) #7	FAT4 (ENSAMEG00000012971) #9	ANKRD50 (ENSAMEG00000017520) #10	SPRY1 (ENSAMEG00000020222) #11	SPATA5 (ENSAMEG00000017512) #12	NUDT6 (ENSAMEG00000017507) #13	FGF2 (ENSAMEG00000017506) #14	BBS12 (ENSAMEG00000019141) #15	ENSAMEG00000005873	IL21 (ENSAMEG00000005893) #16	IL2 (ENSAMEG00000005901) #17	ADAD1 (ENSAMEG00000005920) #18	BLTP1 (ENSAMEG00000005935) #19	TRPC3 (ENSAMEG00000006036) #20	BBS7 (ENSAMEG00000006076) #21	CCNA2 (ENSAMEG00000006109) #22	EXOSC9 (ENSAMEG00000006133) #23	ANXA5 (ENSAMEG00000004986) #25	QRFPR (ENSAMEG00000003088) #27	TNIP3 (ENSAMEG00000003076) #28	NDNF (ENSAMEG00000003069) #29	ENSAMEG00000003050 #30
Mustelinae	ANCESTRAL SPECIES	113	ENSGT00390000001301 #7	ENSGT00940000155719.b #9	ENSGT00940000155116.b #10	ENSGT00950000183055.b.a #11	ENSGT00940000157323 #12	ENSGT00390000008458 #13	ENSGT00940000161583 #14	ENSGT00390000008984 #15	ENSGT00940000162309	ENSGT00390000010494 #16	ENSGT00390000003555 #17	ENSGT00940000156842 #18	ENSGT00640000091487 #19	ENSGT01060000248588.a.c.b #20	ENSGT00390000012346 #21	ENSGT00940000155372 #22	ENSGT00950000183130.A #23	ENSGT00940000155988 #25	ENSGT01070000253744.a.b #27	ENSGT00510000046908.a.a.b #28	ENSGT00390000007586.a.b #29	ENSGT00940000158340 #30	ENSGT00940000153395.a #32	ENSGT00940000163685	ENSGT00940000155475 #33	ENSGT00800000124172 #35	ENSGT00530000064570 #36	ENSGT00940000156337 #37	ENSGT00950000183027.b	ENSGT00950000183054.a.a.a	ENSGT00950000182924.A.b.a.b
Ferret	MODERN SPECIES	183	ENSMPUG00000017384	SPRY1 (ENSMPUG00000018965) #11	SPATA5 (ENSMPUG00000017385) #12	NUDT6 (ENSMPUG00000017386) #13	FGF2 (ENSMPUG00000017387) #14	BBS12 (ENSMPUG00000018971) #15	ENSMPUG00000017388	ENSMPUG00000018974	IL21 (ENSMPUG00000017391) #16	IL2 (ENSMPUG00000017393) #17	ADAD1 (ENSMPUG00000017394) #18	BLTP1 (ENSMPUG00000017395) #19	ENSMPUG00000017399	TRPC3 (ENSMPUG00000017402) #20	BBS7 (ENSMPUG00000017404) #21	CCNA2 (ENSMPUG00000017407) #22	EXOSC9 (ENSMPUG00000017410) #23	ANXA5 (ENSMPUG00000017411) #25	QRFPR (ENSMPUG00000017412) #27	TNIP3 (ENSMPUG00000017413) #28	NDNF (ENSMPUG00000017414) #29	PRDM5 (ENSMPUG00000017415) #30	MAD2L1 (ENSMPUG00000017416) #32	ENSMPUG00000017417	PDE5A (ENSMPUG00000017420) #33	FABP2 (ENSMPUG00000017421) #35	USP53 (ENSMPUG00000017422) #37	MYOZ2 (ENSMPUG00000017430)	SYNPO2 (ENSMPUG00000017431)	SEC24D (ENSMPUG00000017433)	METTL14 (ENSMPUG00000017434)
American mink	MODERN SPECIES	144				SPATA5 (ENSNVIG00000014363) #12	NUDT6 (ENSNVIG00000014336) #13	ENSNVIG00000014326	FGF2 (ENSNVIG00000014318) #14	BBS12 (ENSNVIG00000014313) #15	ENSNVIG00000014308	IL21 (ENSNVIG00000014270) #16	IL2 (ENSNVIG00000014254) #17	ADAD1 (ENSNVIG00000014224) #18	BLTP1 (ENSNVIG00000013453) #19	TRPC3 (ENSNVIG00000013343) #20	BBS7 (ENSNVIG00000013306) #21	CCNA2 (ENSNVIG00000013266) #22	EXOSC9 (ENSNVIG00000013232) #23	ANXA5 (ENSNVIG00000013148) #25	QRFPR (ENSNVIG00000013132) #27	TNIP3 (ENSNVIG00000013062) #28	NDNF (ENSNVIG00000013039) #29	PRDM5 (ENSNVIG00000012926) #30	MD2L1 (ENSNVIG00000012901) #32	ENSNVIG00000012892	PDE5A (ENSNVIG00000012783) #33	FABPI (ENSNVIG00000012755) #35	C4orf3 (ENSNVIG00000012753) #36	USP53 (ENSNVIG00000012706) #37	MYOZ2 (ENSNVIG00000012700)	SYNPO2 (ENSNVIG00000012675)	SEC24D (ENSNVIG00000012626)
Canidae	ANCESTRAL SPECIES	61	ENSGT00390000001301 #7	ENSGT00940000155719.b #9	ENSGT00940000155116.b #10	ENSGT00950000183055.b.a #11	ENSGT00940000157323 #12	ENSGT00390000008458.e #13	ENSGT00940000161583 #14	ENSGT00390000008984 #15	ENSGT00940000162309	ENSGT00390000010494 #16	ENSGT00390000003555 #17	ENSGT00940000156842 #18	ENSGT00640000091487 #19	ENSGT01060000248588.a.c.b #20	ENSGT00390000012346 #21	ENSGT00940000155372 #22	ENSGT00950000183130.A #23	ENSGT01010000222815	ENSGT00940000155988 #25	ENSGT01070000253744.a.b #27	ENSGT00510000046908.a.a.b #28	ENSGT00390000007586.a.b #29	ENSGT00940000158340 #30
Canis_lupus	ANCESTRAL SPECIES	48	ENSGT00940000155719.b #9	ENSGT00940000155116.b #10	ENSGT00500000045333.e.c.a	ENSGT00950000183055.b.a #11	ENSGT00940000157323 #12	ENSGT00390000008458.e #13	ENSGT00940000161583 #14	ENSGT00390000008984 #15	ENSGT00940000162309	ENSGT00390000010494 #16	ENSGT00390000003555 #17	ENSGT00940000156842 #18	ENSGT00640000091487 #19	ENSGT01060000248588.a.c.b #20	ENSGT00390000012346 #21	ENSGT00940000155372 #22	ENSGT00950000183130.A #23	ENSGT01010000222815	ENSGT00940000155988 #25	ENSGT01070000253744.a.b #27	ENSGT00510000046908.a.a.b #28	ENSGT00390000007586.a.b #29	ENSGT00940000158340 #30	ENSGT00940000163685.e	ENSGT00940000153395.a #32	ENSGT00940000163685.f.a	ENSGT01050000244818.t.c.a.b.a.b.a.a
Dog	MODERN SPECIES	10	FAT4 (ENSCAFG00845018366) #9	ANKRD50 (ENSCAFG00845018677) #10	ENSCAFG00845018883	ENSCAFG00845018922	SPRY1 (ENSCAFG00845019042) #11	ENSCAFG00845019163 #12	ENSCAFG00845019786 #13	BBS12 (ENSCAFG00845020036) #15	ENSCAFG00845020056	IL21 (ENSCAFG00845020106) #16	IL2 (ENSCAFG00845020168) #17	ADAD1 (ENSCAFG00845020228) #18	BLTP1 (ENSCAFG00845020357) #19	TRPC3 (ENSCAFG00845020742) #20	BBS7 (ENSCAFG00845021025) #21	CCNA2 (ENSCAFG00845021203) #22	EXOSC9 (ENSCAFG00845021268) #23	SMIM43 (ENSCAFG00845021369)	ANXA5 (ENSCAFG00845021481) #25	QRFPR (ENSCAFG00845021749) #27	TNIP3 (ENSCAFG00845021891) #28	NDNF (ENSCAFG00845022460) #29	ENSCAFG00845022502	ENSCAFG00845022584 #30	ENSCAFG00845022931	ENSCAFG00845023060	ENSCAFG00845023145	ENSCAFG00845023433	ENSCAFG00845023475	ENSCAFG00845017422	ENSCAFG00845017495
Dingo	MODERN SPECIES	28	ANKRD50 (ENSCAFG00020018369) #10	ENSCAFG00020018368	ENSCAFG00020018364	SPRY1 (ENSCAFG00020018361) #11	SPATA5 (ENSCAFG00020018331) #12	NUDT6 (ENSCAFG00020018327) #13	FGF2 (ENSCAFG00020018322) #14	BBS12 (ENSCAFG00020018319) #15	ENSCAFG00020018316	IL21 (ENSCAFG00020018312) #16	IL2 (ENSCAFG00020018289) #17	ADAD1 (ENSCAFG00020018271) #18	BLTP1 (ENSCAFG00020018234) #19	TRPC3 (ENSCAFG00020017728) #20	BBS7 (ENSCAFG00020017716) #21	CCNA2 (ENSCAFG00020017712) #22	EXOSC9 (ENSCAFG00020017711) #23	ANXA5 (ENSCAFG00020017709) #25	ENSCAFG00020017708	QRFPR (ENSCAFG00020017699) #27	ENSCAFG00020017696 #28	NDNF (ENSCAFG00020017691) #29	PRDM5 (ENSCAFG00020017685) #30	ENSCAFG00020017680 #32
Red fox	MODERN SPECIES	129	SPRY1 (ENSVVUG00000013710) #11	ENSVVUG00000013703	SPATA5 (ENSVVUG00000013672) #12	NUDT6 (ENSVVUG00000013652) #13	FGF2 (ENSVVUG00000013637) #14	BBS12 (ENSVVUG00000013634) #15	ENSVVUG00000013632	IL21 (ENSVVUG00000013615) #16	IL2 (ENSVVUG00000013605) #17	ADAD1 (ENSVVUG00000013576) #18	ENSVVUG00000013492 #19	ENSVVUG00000013429 #19	ENSVVUG00000013376 #19	TRPC3 (ENSVVUG00000013359) #20	BBS7 (ENSVVUG00000013344) #21	CCNA2 (ENSVVUG00000013326) #22	EXOSC9 (ENSVVUG00000013324) #23	ENSVVUG00000013321	ANXA5 (ENSVVUG00000013320) #25	QRFPR (ENSVVUG00000013287) #27	TNIP3 (ENSVVUG00000013240) #28	NDNF (ENSVVUG00000013226) #29	ENSVVUG00000013218	PRDM5 (ENSVVUG00000013192) #30
Felidae	ANCESTRAL SPECIES	4	ENSGT00390000001301 #7	ENSGT00940000155719.b #9	ENSGT00940000155116.b #10	ENSGT00950000183055.b.a #11	ENSGT00940000157323 #12	ENSGT00390000008458 #13	ENSGT00940000161583 #14	ENSGT00390000008984 #15	ENSGT00940000162309	ENSGT00390000010494 #16	ENSGT00390000003555 #17	ENSGT00940000156842 #18	ENSGT00640000091487 #19	ENSGT01060000248588.a.c.b #20	ENSGT00390000012346 #21	ENSGT00940000155372 #22	ENSGT00950000183130.A.t #23	ENSGT01010000222815	ENSGT00940000155988 #25	ENSGT01070000253744.a.b #27	ENSGT00510000046908.a.a.b #28	ENSGT00390000007586.a.b #29	ENSGT00940000158340 #30	ENSGT00940000153395.a #32	ENSGT00940000155475 #33	ENSGT00800000124172 #35	ENSGT00530000064570 #36	ENSGT00940000156337 #37	ENSGT00950000183027.b	ENSGT00950000183054.a.a.a	ENSGT00950000182924.A.b.a.b
Cat	MODERN SPECIES	235	ENSFCAG00000052442	FAT4 (ENSFCAG00000029544) #9	ENSFCAG00000035996	ENSFCAG00000049967	ANKRD50 (ENSFCAG00000022321) #10	SPRY1 (ENSFCAG00000013543) #11	SPATA5 (ENSFCAG00000013539) #12	NUDT6 (ENSFCAG00000036723) #13	CETN4 (ENSFCAG00000030782)	IL21 (ENSFCAG00000006101) #16	IL2 (ENSFCAG00000013688) #17	ADAD1 (ENSFCAG00000019180) #18	KIAA1109 (ENSFCAG00000028832) #19	TRPC3 (ENSFCAG00000002559) #20	BBS7 (ENSFCAG00000026950) #21	CCNA2 (ENSFCAG00000023290) #22	EXOSC9 (ENSFCAG00000025246) #23	ENSFCAG00000049395 #23	ANXA5 (ENSFCAG00000004439) #25	QRFPR (ENSFCAG00000029517) #27	TNIP3 (ENSFCAG00000011004) #28	NDNF (ENSFCAG00000011003) #29	PRDM5 (ENSFCAG00000025656) #30	ENSFCAG00000029540	MAD2L1 (ENSFCAG00000027818) #32	ENSFCAG00000030366	PDE5A (ENSFCAG00000010364) #33	FABP2 (ENSFCAG00000026257) #35	CB1H4orf3 (ENSFCAG00000043946) #36	USP53 (ENSFCAG00000014472) #37	MYOZ2 (ENSFCAG00000003007)
Panthera	ANCESTRAL SPECIES	5	ENSGT00390000001301 #7	ENSGT00940000155719.b #9	ENSGT00940000155116.b #10	ENSGT00950000183055.b.a #11	ENSGT00940000157323 #12	ENSGT00390000008458 #13	ENSGT00940000161583 #14	ENSGT00390000008984 #15	ENSGT00940000162309	ENSGT00390000010494 #16	ENSGT00390000003555 #17	ENSGT00940000156842 #18	ENSGT00640000091487 #19	ENSGT01060000248588.a.c.b #20	ENSGT00390000012346 #21	ENSGT00940000155372 #22	ENSGT00950000183130.A.t #23	ENSGT01010000222815	ENSGT00940000155988 #25	ENSGT01070000253744.a.b #27	ENSGT00510000046908.a.a.b #28	ENSGT00390000007586.a.b #29	ENSGT00940000158340 #30	ENSGT00940000153395.a #32	ENSGT00940000155475 #33	ENSGT00800000124172 #35	ENSGT00530000064570 #36	ENSGT00940000156337 #37	ENSGT00950000183027.b	ENSGT00950000183054.a.a.a	ENSGT00950000182924.A.b.a.b
Tiger	MODERN SPECIES	267	FRMD3 (ENSPTIG00000005819)	RASEF (ENSPTIG00000006676)	FAT4 (ENSPTIG00000007279) #9	ANKRD50 (ENSPTIG00000007405) #10	SPRY1 (ENSPTIG00000009827) #11	SPATA5 (ENSPTIG00000007655) #12	NUDT6 (ENSPTIG00000007701) #13	FGF2 (ENSPTIG00000007794) #14	ENSPTIG00000007833	IL21 (ENSPTIG00000007853) #16	IL2 (ENSPTIG00000008068) #17	ADAD1 (ENSPTIG00000008158) #18	BLTP1 (ENSPTIG00000008209) #19	TRPC3 (ENSPTIG00000009322) #20	BBS7 (ENSPTIG00000009502) #21	CCNA2 (ENSPTIG00000009997) #22	EXOSC9 (ENSPTIG00000010017) #23	ANXA5 (ENSPTIG00000010178) #25	QRFPR (ENSPTIG00000010292) #27	TNIP3 (ENSPTIG00000010424) #28	NDNF (ENSPTIG00000010665) #29	PRDM5 (ENSPTIG00000010807) #30	MAD2L1 (ENSPTIG00000011046) #32	ENSPTIG00000011110	PDE5A (ENSPTIG00000011392) #33	FABP2 (ENSPTIG00000011486) #35	C4orf3 (ENSPTIG00000011587) #36	USP53 (ENSPTIG00000011597) #37	MYOZ2 (ENSPTIG00000011762)	SYNPO2 (ENSPTIG00000011832)	SEC24D (ENSPTIG00000012156)
Panthera_a	ANCESTRAL SPECIES	2	ENSGT00390000001301 #7	ENSGT00940000155719.b #9	ENSGT00940000155116.b #10	ENSGT00950000183055.b.a #11	ENSGT00940000157323 #12	ENSGT00390000008458 #13	ENSGT00940000161583 #14	ENSGT00390000008984 #15	ENSGT00940000162309	ENSGT00390000010494 #16	ENSGT00390000003555 #17	ENSGT00940000156842 #18	ENSGT00640000091487 #19	ENSGT01060000248588.a.c.b #20	ENSGT00390000012346 #21	ENSGT00940000155372 #22	ENSGT00950000183130.A.t #23	ENSGT01010000222815	ENSGT00940000155988 #25	ENSGT01070000253744.a.b #27	ENSGT00510000046908.a.a.b #28	ENSGT00390000007586.a.b #29	ENSGT00940000158340 #30	ENSGT00940000153395.a #32	ENSGT00940000155475 #33	ENSGT00800000124172 #35	ENSGT00530000064570 #36	ENSGT00940000156337 #37	ENSGT00950000183027.b	ENSGT00950000183054.a.a.a	ENSGT00950000182924.A.b.a.b
leopard	MODERN SPECIES	3	FAT4 (ENSPPRG00000002405) #9	ENSPPRG00000003798	ANKRD50 (ENSPPRG00000004909) #10	SPRY1 (ENSPPRG00000019602) #11	SPATA5 (ENSPPRG00000005683) #12	NUDT6 (ENSPPRG00000006152) #13	FGF2 (ENSPPRG00000006805) #14	ENSPPRG00000019692 #15	ENSPPRG00000007365	IL21 (ENSPPRG00000007690) #16	IL2 (ENSPPRG00000008206) #17	ADAD1 (ENSPPRG00000008821) #18	BLTP1 (ENSPPRG00000010448) #19	TRPC3 (ENSPPRG00000012337) #20	BBS7 (ENSPPRG00000013153) #21	CCNA2 (ENSPPRG00000013431) #22	ENSPPRG00000014689 #23	ANXA5 (ENSPPRG00000019765) #25	QRFPR (ENSPPRG00000021780) #27	TNIP3 (ENSPPRG00000023814) #28	NDNF (ENSPPRG00000023532) #29	PRDM5 (ENSPPRG00000001020) #30	MAD2L1 (ENSPPRG00000001274) #32	ENSPPRG00000001481	PDE5A (ENSPPRG00000002118) #33	FABP2 (ENSPPRG00000002199) #35	C4orf3 (ENSPPRG00000002293) #36	USP53 (ENSPPRG00000002944) #37	MYOZ2 (ENSPPRG00000003221)	ENSPPRG00000009110	SYNPO2 (ENSPPRG00000010649)
lion	DUPLICATION
lion	MODERN SPECIES	12	ENSPLOG00000014438	ENSPLOG00000014279	LIPG (ENSPLOG00000014024)	ACAA2 (ENSPLOG00000013846)	MYO5B (ENSPLOG00000013501)	CFAP53 (ENSPLOG00000013386)	MBD1 (ENSPLOG00000013232)	CXXC1 (ENSPLOG00000013121)	SKA1 (ENSPLOG00000013016)	ENSPLOG00000012947	MRO (ENSPLOG00000012819)	ME2 (ENSPLOG00000012643)	ELAC1 (ENSPLOG00000012525)	SMAD4 (ENSPLOG00000012428)	MEX3C (ENSPLOG00000012379)	ENSPLOG00000012345 #22	ENSPLOG00000012308	DCC (ENSPLOG00000011680)	MBD2 (ENSPLOG00000011506)	POLI (ENSPLOG00000011432)	STARD6 (ENSPLOG00000011360)	C18orf54 (ENSPLOG00000011291)	DYNAP (ENSPLOG00000011216)	RAB27B (ENSPLOG00000011162)	CCDC68 (ENSPLOG00000011056)	TCF4 (ENSPLOG00000010490)	TXNL1 (ENSPLOG00000010244)	WDR7 (ENSPLOG00000010168)	ST8SIA3 (ENSPLOG00000010116)	ONECUT2 (ENSPLOG00000010100)	NARS1 (ENSPLOG00000009844)
lion	MODERN SPECIES	4	ENSPLOG00000010291	FAT4 (ENSPLOG00000010316) #9	ANKRD50 (ENSPLOG00000010397) #10	SPRY1 (ENSPLOG00000010444) #11	SPATA5 (ENSPLOG00000010465) #12	NUDT6 (ENSPLOG00000010559) #13	FGF2 (ENSPLOG00000010598) #14	BBS12 (ENSPLOG00000010633) #15	ENSPLOG00000010652	IL21 (ENSPLOG00000010718) #16	IL2 (ENSPLOG00000010807) #17	ADAD1 (ENSPLOG00000010854) #18	BLTP1 (ENSPLOG00000011100) #19	TRPC3 (ENSPLOG00000011770) #20	BBS7 (ENSPLOG00000012081) #21	CCNA2 (ENSPLOG00000012375) #22	EXOSC9 (ENSPLOG00000012469) #23	SMIM43 (ENSPLOG00000012607)	ANXA5 (ENSPLOG00000012713) #25	QRFPR (ENSPLOG00000012873) #27	TNIP3 (ENSPLOG00000012998) #28	NDNF (ENSPLOG00000013303) #29	PRDM5 (ENSPLOG00000013388) #30	MAD2L1 (ENSPLOG00000013801) #32	ENSPLOG00000013948	PDE5A (ENSPLOG00000014134) #33	FABP2 (ENSPLOG00000014469) #35	C4orf3 (ENSPLOG00000014512) #36	USP53 (ENSPLOG00000014535) #37	MYOZ2 (ENSPLOG00000014603)	SYNPO2 (ENSPLOG00000014681)
Laurasiatheria_c	ANCESTRAL SPECIES	8	ENSGT00390000001301 #7	ENSGT00940000155719.b #9	ENSGT00940000155116.b #10	ENSGT00950000183055.b.a #11	ENSGT00940000157323 #12	ENSGT00390000008458 #13	ENSGT00940000161583 #14	ENSGT00390000008984 #15	ENSGT00940000162309	ENSGT00390000010494 #16	ENSGT00390000003555 #17	ENSGT00940000156842 #18	ENSGT00640000091487 #19	ENSGT01060000248588.a.c.b #20	ENSGT00390000012346 #21	ENSGT00940000155372 #22	ENSGT00950000183130.A #23	ENSGT01010000222815	ENSGT00640000091653 #24	ENSGT00940000155988 #25	ENSGT01070000253744.a.b #27	ENSGT00510000046908.a.a.b #28	ENSGT00390000007586.a.b #29	ENSGT00940000158340 #30	ENSGT00940000153395.a #32	ENSGT00940000155475 #33	ENSGT00800000124172 #35	ENSGT00530000064570 #36	ENSGT00940000156337 #37	ENSGT00950000183027.b	ENSGT00950000183054.a.a.a
Chiroptera	ANCESTRAL SPECIES	36	ENSGT00390000001301 #7	ENSGT00940000155719.b #9	ENSGT00940000155116.b #10	ENSGT00950000183055.b.a #11	ENSGT00940000157323 #12	ENSGT00390000008458 #13	ENSGT00940000161583 #14	ENSGT00390000008984 #15	ENSGT00940000162309	ENSGT00390000010494 #16	ENSGT00390000003555 #17	ENSGT00940000156842 #18	ENSGT00640000091487 #19	ENSGT01060000248588.a.c.b #20	ENSGT00390000012346 #21	ENSGT00940000155372 #22	ENSGT00950000183130.A #23	ENSGT00940000155988 #25	ENSGT01070000253744.a.b #27	ENSGT00510000046908.a.a.b #28	ENSGT00390000007586.a.b #29	ENSGT00940000158340 #30	ENSGT00940000153395.a #32	ENSGT00940000155475.f #33	ENSGT00800000124172 #35	ENSGT00530000064570 #36	ENSGT00940000156337.h #37	ENSGT00950000183027.b	ENSGT00950000183054.a.a.a	ENSGT00950000182924.A.b.a.b	ENSGT00550000075003
Microchiroptera	ANCESTRAL SPECIES	38	ENSGT00390000001301 #7	ENSGT00940000155719.b #9	ENSGT00940000155116.b #10	ENSGT00950000183055.b.a #11	ENSGT00940000157323 #12	ENSGT00390000008458 #13	ENSGT00940000161583 #14	ENSGT00390000008984 #15	ENSGT00940000162309	ENSGT00390000010494 #16	ENSGT00390000003555 #17	ENSGT00940000156842 #18	ENSGT00640000091487 #19	ENSGT01060000248588.a.c.b #20	ENSGT00390000012346 #21	ENSGT00940000155372 #22	ENSGT00950000183130.A #23	ENSGT00940000155988 #25	ENSGT01070000253744.a.b #27	ENSGT00510000046908.a.a.b #28	ENSGT00390000007586.a.b #29	ENSGT00940000158340 #30	ENSGT00940000153395.a #32	ENSGT00940000155475.f #33	ENSGT00800000124172 #35	ENSGT00530000064570 #36	ENSGT00940000156337.h #37	ENSGT00950000183027.b	ENSGT00950000183054.a.a.a	ENSGT00950000182924.A.b.a.b	ENSGT00550000075003
Microbat	DUPLICATION
Microbat	DUPLICATION
Microbat	MODERN SPECIES	1017								KHDRBS2 (ENSMLUG00000005484)	ENSMLUG00000005434	ENSMLUG00000030356	ENSMLUG00000028909	ENSMLUG00000027806 #22	RAB23 (ENSMLUG00000004058)	ENSMLUG00000004055	ZNF451 (ENSMLUG00000004044)	ENSMLUG00000023844 #22	BEND6 (ENSMLUG00000001178)	ENSMLUG00000030379	DST (ENSMLUG00000005610)	ENSMLUG00000027092	COL21A1 (ENSMLUG00000004388)	BMP5 (ENSMLUG00000004021)	HMGCLL1 (ENSMLUG00000002703)	GFRAL (ENSMLUG00000012114)	HCRTR2 (ENSMLUG00000012103) ##27	ENSMLUG00000024260	FAM83B (ENSMLUG00000006727)	TINAG (ENSMLUG00000016940)	MLIP (ENSMLUG00000008145)	LRRC1 (ENSMLUG00000008118)	ENSMLUG00000029414
Microbat	MODERN SPECIES	1017												KHDRBS2 (ENSMLUG00000005484)	ENSMLUG00000005434	ENSMLUG00000030356	ENSMLUG00000028909	ENSMLUG00000027806 #22	RAB23 (ENSMLUG00000004058)	ENSMLUG00000004055	ZNF451 (ENSMLUG00000004044)	ENSMLUG00000023844 #22	BEND6 (ENSMLUG00000001178)	ENSMLUG00000030379	DST (ENSMLUG00000005610)	ENSMLUG00000027092	COL21A1 (ENSMLUG00000004388)	BMP5 (ENSMLUG00000004021)	HMGCLL1 (ENSMLUG00000002703)	GFRAL (ENSMLUG00000012114)	HCRTR2 (ENSMLUG00000012103) ##27	ENSMLUG00000024260	FAM83B (ENSMLUG00000006727)
Microbat	MODERN SPECIES	1725														TRPC3 (ENSMLUG00000011662) #20	BBS7 (ENSMLUG00000009605) #21	ENSMLUG00000005161 #22	EXOSC9 (ENSMLUG00000005167) #23
Greater horseshoe bat	MODERN SPECIES	9	INTU (ENSRFEG00010009817) #7	FAT4 (ENSRFEG00010009661) #9	ANKRD50 (ENSRFEG00010009613) #10	SPRY1 (ENSRFEG00010009584) #11	SPATA5 (ENSRFEG00010009397) #12	NUDT6 (ENSRFEG00010009362) #13	FGF2 (ENSRFEG00010009335) #14	BBS12 (ENSRFEG00010009327) #15	ENSRFEG00010009313	IL21 (ENSRFEG00010009275) #16	IL2 (ENSRFEG00010009231) #17	ADAD1 (ENSRFEG00010008948) #18	BLTP1 (ENSRFEG00010008636) #19	TRPC3 (ENSRFEG00010008458) #20	BBS7 (ENSRFEG00010008388) #21	CCNA2 (ENSRFEG00010008288) #22	EXOSC9 (ENSRFEG00010008091) #23	ENSRFEG00010007759 #25	QRFPR (ENSRFEG00010007677) #27	TNIP3 (ENSRFEG00010007514) #28	NDNF (ENSRFEG00010007480) #29	PRDM5 (ENSRFEG00010007397) #30	ENSRFEG00010007352 #32	PDE5A (ENSRFEG00010007136) #33	FABP2 (ENSRFEG00010007055) #35	ENSRFEG00010007022 #36	USP53 (ENSRFEG00010006951) #37	MYOZ2 (ENSRFEG00010019470)	SYNPO2 (ENSRFEG00010019404)	SEC24D (ENSRFEG00010019312)	METTL14 (ENSRFEG00010019257)
Megabat	MODERN SPECIES	1880														TRPC3 (ENSPVAG00000001292) #20	BBS7 (ENSPVAG00000001286) #21	CCNA2 (ENSPVAG00000001285) #22	EXOSC9 (ENSPVAG00000001284) #23	ENSPVAG00000001282 #24
Equus	ANCESTRAL SPECIES	24	ENSGT00390000001301 #7	ENSGT00940000155719.b #9	ENSGT00940000155116.b #10	ENSGT00950000183055.b.a #11	ENSGT00940000157323 #12	ENSGT00390000008458 #13	ENSGT00940000161583 #14	ENSGT00390000008984 #15	ENSGT00940000162309	ENSGT00390000010494 #16	ENSGT00390000003555 #17	ENSGT00940000156842 #18	ENSGT00640000091487 #19	ENSGT01060000248588.a.c.b #20	ENSGT00390000012346 #21	ENSGT00940000155372 #22	ENSGT00950000183130.A #23	ENSGT01010000222815	ENSGT00640000091653 #24	ENSGT00940000155988 #25	ENSGT01070000253744.a.b #27	ENSGT00510000046908.a.a.b #28	ENSGT00390000007586.a.b #29	ENSGT00940000158340.a #30	ENSGT00940000153395.a #32	ENSGT00940000163685	ENSGT00940000155475 #33	ENSGT00800000124172 #35	ENSGT00530000064570 #36	ENSGT00940000156337 #37	ENSGT00950000183027.b
Donkey	MODERN SPECIES	22	SLC25A31 (ENSEASG00005018160)	INTU (ENSEASG00005018165) #7	FAT4 (ENSEASG00005018174) #9	ANKRD50 (ENSEASG00005018176) #10	SPRY1 (ENSEASG00005032359) #11	SPATA5 (ENSEASG00005018182) #12	NUDT6 (ENSEASG00005026410) #13	BBS12 (ENSEASG00005018190) #15	ENSEASG00005018192	IL21 (ENSEASG00005023646) #16	IL2 (ENSEASG00005026942) #17	ADAD1 (ENSEASG00005018202) #18	BLTP1 (ENSEASG00005028797) #19	TRPC3 (ENSEASG00005018240) #20	BBS7 (ENSEASG00005018299) #21	CCNA2 (ENSEASG00005018324) #22	EXOSC9 (ENSEASG00005018326) #23	SMIM43 (ENSEASG00005029260)	ENSEASG00005036070 #24	ANXA5 (ENSEASG00005018334) #25	QRFPR (ENSEASG00005018340) #27	TNIP3 (ENSEASG00005018349) #28	NDNF (ENSEASG00005018356) #29	ENSEASG00005018365 #30	MAD2L1 (ENSEASG00005018388) #32	ENSEASG00005026719	PDE5A (ENSEASG00005009800) #33	FABP2 (ENSEASG00005009711) #35	C4orf3 (ENSEASG00005009709) #36	USP53 (ENSEASG00005009707) #37	MYOZ2 (ENSEASG00005009706)
Horse	MODERN SPECIES	11	ENSECAG00000045058	FAT4 (ENSECAG00000013233) #9	ANKRD50 (ENSECAG00000013698) #10	SPRY1 (ENSECAG00000013746) #11	SPATA5 (ENSECAG00000014176) #12	NUDT6 (ENSECAG00000014716) #13	FGF2 (ENSECAG00000014829) #14	BBS12 (ENSECAG00000003961) #15	CETN4 (ENSECAG00000014841)	IL21 (ENSECAG00000037491) #16	ADAD1 (ENSECAG00000016639) #18	IL2 (ENSECAG00000015616) #17	KIAA1109 (ENSECAG00000017899) #19	TRPC3 (ENSECAG00000023168) #20	BBS7 (ENSECAG00000023824) #21	CCNA2 (ENSECAG00000054990) #22	EXOSC9 (ENSECAG00000024732) #23	SMIM43 (ENSECAG00000044567)	ENSECAG00000036667 #24	ANXA5 (ENSECAG00000006429) #25	QRFPR (ENSECAG00000010698) #27	TNIP3 (ENSECAG00000010953) #28	NDNF (ENSECAG00000011459) #29	PRDM5 (ENSECAG00000011516) #30	ENSECAG00000028123	ENSECAG00000046674	ENSECAG00000013880	PDE5A (ENSECAG00000013957) #33	FABP2 (ENSECAG00000016345) #35	C2H4orf3 (ENSECAG00000016365) #36	USP53 (ENSECAG00000016383) #37
Atlantogenata	ANCESTRAL SPECIES	49	ENSGT00390000001301 #7	ENSGT00940000155719.b #9	ENSGT00940000155116.b #10	ENSGT00950000183055.b.a #11	ENSGT00940000157323 #12	ENSGT00390000008458 #13	ENSGT00940000161583 #14	ENSGT00390000008984 #15	ENSGT00940000162309	ENSGT00390000010494 #16	ENSGT00390000003555 #17	ENSGT00940000156842 #18	ENSGT00640000091487 #19	ENSGT01060000248588.a.c.b #20	ENSGT00390000012346 #21	ENSGT00940000155372 #22	ENSGT00950000183130.A #23	ENSGT00940000155988 #25	ENSGT01070000253744.a.b #27	ENSGT00510000046908.a.a.b #28	ENSGT00390000007586.a.b #29	ENSGT00940000158340 #30
Xenarthra	ANCESTRAL SPECIES	310					ENSGT00950000183055.b.a #11	ENSGT00940000157323 #12	ENSGT00390000008458 #13	ENSGT00940000161583 #14	ENSGT00390000008984 #15	ENSGT00390000010494 #16	ENSGT00390000003555 #17	ENSGT00940000156842 #18	ENSGT00640000091487 #19	ENSGT01060000248588.a.c.b #20	ENSGT00390000012346 #21	ENSGT00940000155372 #22	ENSGT00950000183130.A #23
Armadillo	MODERN SPECIES	3294	SPRY1 (ENSDNOG00000016915) #11	SPATA5 (ENSDNOG00000013220) #12	ENSDNOG00000032911	NUDT6 (ENSDNOG00000046961) #13	FGF2 (ENSDNOG00000014648) #14	BBS12 (ENSDNOG00000030640) #15	IL21 (ENSDNOG00000024605) #16	ENSDNOG00000031937	IL2 (ENSDNOG00000009005) #17	ADAD1 (ENSDNOG00000014986) #18	ENSDNOG00000046777 #19	ENSDNOG00000009442 #19	ENSDNOG00000042720 #19	ENSDNOG00000031010 #20	BBS7 (ENSDNOG00000010654) #21	CCNA2 (ENSDNOG00000010635) #22	EXOSC9 (ENSDNOG00000010614) #23	ENSDNOG00000039550	ANXA5 (ENSDNOG00000041581) #25	ENSDNOG00000014416	QRFPR (ENSDNOG00000018386) #27
Sloth	MODERN SPECIES	2033														TRPC3 (ENSCHOG00000000791) #20	BBS7 (ENSCHOG00000000786) #21	ENSCHOG00000000782 #22	EXOSC9 (ENSCHOG00000000779) #23
Afrotheria	ANCESTRAL SPECIES	43	ENSGT00940000160648	ENSGT00390000001301 #7	ENSGT00940000155719.b #9	ENSGT00940000155116.b #10	ENSGT00950000183055.b.a #11	ENSGT00390000008458 #13	ENSGT00940000161583 #14	ENSGT00390000008984 #15	ENSGT00940000162309	ENSGT00390000010494 #16	ENSGT00390000003555 #17	ENSGT00940000156842 #18	ENSGT00640000091487 #19	ENSGT01060000248588.a.c.b #20	ENSGT00390000012346 #21	ENSGT00940000155372 #22	ENSGT00950000183130.A #23	ENSGT00940000155988 #25	ENSGT01070000253744.a.b #27	ENSGT00510000046908.a.a.b #28	ENSGT00390000007586.a.b #29	ENSGT00940000158340 #30	ENSGT00940000163685	ENSGT00940000153395.a #32	ENSGT00940000154633	ENSGT00940000156916	ENSGT01090000260082.d.a.b	ENSGT00940000158397	ENSGT00550000074980	ENSGT00390000011087	ENSGT00940000159028
Afrotheria_a	ANCESTRAL SPECIES	41	ENSGT00940000160648	ENSGT00390000001301 #7	ENSGT00940000155719.b #9	ENSGT00940000155116.b #10	ENSGT00950000183055.b.a #11	ENSGT00390000008458 #13	ENSGT00940000161583 #14	ENSGT00390000008984 #15	ENSGT00940000162309	ENSGT00390000010494 #16	ENSGT00390000003555 #17	ENSGT00940000156842 #18	ENSGT00640000091487 #19	ENSGT01060000248588.a.c.b #20	ENSGT00390000012346 #21	ENSGT00940000155372 #22	ENSGT00950000183130.A #23	ENSGT00940000155988 #25	ENSGT01070000253744.a.b #27	ENSGT00510000046908.a.a.b #28	ENSGT00390000007586.a.b #29	ENSGT00940000158340 #30	ENSGT00940000163685	ENSGT00940000153395.a #32	ENSGT00940000154633	ENSGT00940000156916	ENSGT01090000260082.d.a.b	ENSGT00940000158397	ENSGT00550000074980	ENSGT00390000011087	ENSGT00940000159028
Elephant	MODERN SPECIES	95	ANKRD50 (ENSLAFG00000014815) #10	ENSLAFG00000030774	ENSLAFG00000028216	SPRY1 (ENSLAFG00000001284) #11	ENSLAFG00000016357	ENSLAFG00000016348 #13	FGF2 (ENSLAFG00000008247) #14	BBS12 (ENSLAFG00000011118) #15	ENSLAFG00000032441	IL21 (ENSLAFG00000006024) #16	IL2 (ENSLAFG00000004433) #17	ADAD1 (ENSLAFG00000012345) #18	BLTP1 (ENSLAFG00000003708) #19	TRPC3 (ENSLAFG00000003656) #20	BBS7 (ENSLAFG00000009519) #21	CCNA2 (ENSLAFG00000009517) #22	EXOSC9 (ENSLAFG00000009514) #23	ANXA5 (ENSLAFG00000015410) #25	ENSLAFG00000028496	QRFPR (ENSLAFG00000008559) #27	TNIP3 (ENSLAFG00000011940) #28	NDNF (ENSLAFG00000011934) #29	PRDM5 (ENSLAFG00000006532) #30	ENSLAFG00000029619 #32	ENSLAFG00000029100	ENSLAFG00000026735 #32	ENSLAFG00000028727	ENSLAFG00000031509	ENSLAFG00000028982 #32	ENSLAFG00000029159	ENSLAFG00000030022 #32
Hyrax	MODERN SPECIES	1820														TRPC3 (ENSPCAG00000011600) #20	ENSPCAG00000011447 #21	CCNA2 (ENSPCAG00000011389) #22	EXOSC9 (ENSPCAG00000011287) #23
Tenrec	MODERN SPECIES	5585															BBS7 (ENSETEG00000015200) #21	CCNA2 (ENSETEG00000015197) #22	ENSETEG00000015192 #24	EXOSC9 (ENSETEG00000015190) #23
Marsupialia	DUPLICATION
Marsupialia	ANCESTRAL SPECIES	21	ENSGT00940000155719.b #9	ENSGT00940000155116.b #10	ENSGT00950000183055.b.a #11	ENSGT00940000157323 #12	ENSGT00390000008458 #13	ENSGT00940000161583 #14	ENSGT00390000008984 #15	ENSGT00940000162309	ENSGT00390000010494 #16	ENSGT00950000185813	ENSGT00940000156842.q #18	ENSGT00640000091487 #19	ENSGT01060000248588.a.c.b #20	ENSGT00390000012346 #21	ENSGT00990000214280	ENSGT00940000155372.o #22	ENSGT00950000183130.A #23	ENSGT01010000222815	ENSGT00940000155988 #25	ENSGT01070000253744.a.b #27	ENSGT00390000007586.a.b #29	ENSGT00940000158340 #30	ENSGT00940000153395.a #32	ENSGT00940000155475 #33	ENSGT00800000124172 #35	ENSGT00940000156337 #37	ENSGT00950000183027.b	ENSGT00950000183054.a.a.a	ENSGT00950000182924.A.b.a.b	ENSGT00550000075003	ENSGT00940000158131
Opossum	MODERN SPECIES	4	ENSMODG00000040391	ENSMODG00000037635	ENSMODG00000047717 #11	SPATA5 (ENSMODG00000018895) #12	NUDT6 (ENSMODG00000018898) #13	FGF2 (ENSMODG00000018899) #14	ENSMODG00000018901	ENSMODG00000018903 #16	ENSMODG00000041723	ENSMODG00000040879	ADAD1 (ENSMODG00000018918) #18	BLTP1 (ENSMODG00000018913) #19	ENSMODG00000040429	TRPC3 (ENSMODG00000018925) #20	BBS7 (ENSMODG00000018927) #21	ENSMODG00000018931 #22	EXOSC9 (ENSMODG00000018934) #23	ENSMODG00000025397	ENSMODG00000044318	ENSMODG00000018936 #25	ENSMODG00000018937	QRFPR (ENSMODG00000018939) #27	NDNF (ENSMODG00000042861) #29	ENSMODG00000027696	PRDM5 (ENSMODG00000018942) #30	MAD2L1 (ENSMODG00000018944) #32	PDE5A (ENSMODG00000018947) #33	FABP2 (ENSMODG00000018949) #35	USP53 (ENSMODG00000018951) #37	MYOZ2 (ENSMODG00000041210)	SYNPO2 (ENSMODG00000018955)
Marsupialia_b	ANCESTRAL SPECIES	22	ENSGT00940000155719.b #9	ENSGT00940000155116.b #10	ENSGT00950000183055.b.a #11	ENSGT00940000157323 #12	ENSGT00390000008458 #13	ENSGT00940000161583 #14	ENSGT00390000008984 #15	ENSGT00940000162309	ENSGT00390000010494 #16	ENSGT00950000185813	ENSGT00940000156842.q #18	ENSGT00640000091487 #19	ENSGT01060000248588.a.c.b #20	ENSGT00390000012346 #21	ENSGT00990000214280	ENSGT00940000155372.o #22	ENSGT00950000183130.A #23	ENSGT01010000222815	ENSGT00940000155988 #25	ENSGT01070000253744.a.b #27	ENSGT00390000007586.a.b #29	ENSGT00940000158340 #30	ENSGT00940000153395.a.m #32	ENSGT00940000155475 #33	ENSGT00800000124172 #35	ENSGT00940000156337 #37	ENSGT00950000183027.b	ENSGT00950000183054.a.a.a	ENSGT00950000182924.A.b.a.b	ENSGT00550000075003	ENSGT00940000158131
Diprotodontia	ANCESTRAL SPECIES	25	ENSGT00940000155719.b #9	ENSGT00940000155116.b #10	ENSGT00950000183055.b.a #11	ENSGT00940000157323 #12	ENSGT00390000008458 #13	ENSGT00940000161583 #14	ENSGT00390000008984 #15	ENSGT00940000162309	ENSGT00390000010494 #16	ENSGT00950000185813	ENSGT00940000156842.q #18	ENSGT00640000091487 #19	ENSGT01060000248588.a.c.b #20	ENSGT00390000012346 #21	ENSGT00990000214280	ENSGT00940000155372.o #22	ENSGT00950000183130.A #23	ENSGT00940000155988 #25	ENSGT01070000253744.a.b #27	ENSGT00390000007586.a.b #29	ENSGT00940000158340 #30	ENSGT00940000153395.a.m #32	ENSGT00940000155475 #33	ENSGT00800000124172 #35	ENSGT00940000156337 #37	ENSGT00950000183027.b	ENSGT00950000183054.a.a.a	ENSGT00950000182924.A.b.a.b	ENSGT00550000075003	ENSGT00940000158131	ENSGT00940000165291
Diprotodontia_a	ANCESTRAL SPECIES	26	ENSGT00940000155719.b #9	ENSGT00940000155116.b #10	ENSGT00950000183055.b.a #11	ENSGT00940000157323 #12	ENSGT00390000008458 #13	ENSGT00940000161583 #14	ENSGT00390000008984 #15	ENSGT00940000162309	ENSGT00390000010494 #16	ENSGT00950000185813	ENSGT00940000156842.q #18	ENSGT00640000091487 #19	ENSGT01060000248588.a.c.b #20	ENSGT00390000012346 #21	ENSGT00990000214280	ENSGT00940000155372.o #22	ENSGT00950000183130.A #23	ENSGT00940000155988 #25	ENSGT01070000253744.a.b #27	ENSGT00390000007586.a.b #29	ENSGT00940000158340 #30	ENSGT00940000153395.a.m #32	ENSGT00940000155475 #33	ENSGT00800000124172 #35	ENSGT00940000156337 #37	ENSGT00950000183027.b	ENSGT00950000183054.a.a.a	ENSGT00950000182924.A.b.a.b	ENSGT00550000075003	ENSGT00940000158131	ENSGT00940000165291
koala	MODERN SPECIES	128		FAT4 (ENSPCIG00000021853) #9	ANKRD50 (ENSPCIG00000018249) #10	SPRY1 (ENSPCIG00000029120) #11	SPATA5 (ENSPCIG00000027906) #12	NUDT6 (ENSPCIG00000027939) #13	FGF2 (ENSPCIG00000032123) #14	BBS12 (ENSPCIG00000027943) #15	ENSPCIG00000027944	ENSPCIG00000017890 #16	ENSPCIG00000027947	ENSPCIG00000027949 #18	BLTP1 (ENSPCIG00000027953) #19	TRPC3 (ENSPCIG00000023676) #20	BBS7 (ENSPCIG00000011187) #21	ENSPCIG00000011191 #22	EXOSC9 (ENSPCIG00000011193) #23	ENSPCIG00000036308	ENSPCIG00000027982	ENSPCIG00000027983	SMIM43 (ENSPCIG00000033092)	ENSPCIG00000027984	ANXA5 (ENSPCIG00000027985) #25	QRFPR (ENSPCIG00000004122) #27	ENSPCIG00000036238	NDNF (ENSPCIG00000004131) #29	PRDM5 (ENSPCIG00000004135) #30	ENSPCIG00000020514 #32	PDE5A (ENSPCIG00000020522) #33	FABP2 (ENSPCIG00000020530) #35	USP53 (ENSPCIG00000020533) #37
Common wonbat	MODERN SPECIES	641			SPRY1 (ENSVURG00010014707) #11	SPATA5 (ENSVURG00010014684) #12	ENSVURG00010014678 #13	FGF2 (ENSVURG00010014671) #14	BBS12 (ENSVURG00010014664) #15	ENSVURG00010014657	ENSVURG00010014642 #16	ENSVURG00010014634	ADAD1 (ENSVURG00010014609) #18	BLTP1 (ENSVURG00010014411) #19	TRPC3 (ENSVURG00010012469) #20	BBS7 (ENSVURG00010012415) #21	ENSVURG00010012408	ENSVURG00010012402 #22	EXOSC9 (ENSVURG00010012379) #23	ENSVURG00010012372	ANXA5 (ENSVURG00010012364) #25	QRFPR (ENSVURG00010012358) #27	ENSVURG00010012356	NDNF (ENSVURG00010012353) #29	PRDM5 (ENSVURG00010012287) #30	MAD2L1 (ENSVURG00010012269) #32	PDE5A (ENSVURG00010012234) #33	FABP2 (ENSVURG00010012222) #35	USP53 (ENSVURG00010012212) #37	MYOZ2 (ENSVURG00010012206)	SYNPO2 (ENSVURG00010012195)	SEC24D (ENSVURG00010012166)	METTL14 (ENSVURG00010012138)
Wallaby	MODERN SPECIES	3123																ENSMEUG00000000128 #22	EXOSC9 (ENSMEUG00000000117) #23
Tasmanian devil	MODERN SPECIES	5	SPRY1 (ENSSHAG00000032116) #11	SPATA5 (ENSSHAG00000008238) #12	ENSSHAG00000010207 #13	ENSSHAG00000027078	ENSSHAG00000026481	FGF2 (ENSSHAG00000030193) #14	BBS12 (ENSSHAG00000011117) #15	ENSSHAG00000020593	ENSSHAG00000031828 #16	ENSSHAG00000002065	ENSSHAG00000002892 #18	BLTP1 (ENSSHAG00000004565) #19	TRPC3 (ENSSHAG00000008974) #20	BBS7 (ENSSHAG00000009710) #21	EXOSC9 (ENSSHAG00000002000) #23	CCNA2 (ENSSHAG00000001634) #22	SMIM43 (ENSSHAG00000023755)	ANXA5 (ENSSHAG00000005161) #25	ENSSHAG00000028698 #27	NDNF (ENSSHAG00000008125) #29	ENSSHAG00000003919	PRDM5 (ENSSHAG00000003250) #30	MAD2L1 (ENSSHAG00000008494) #32	PDE5A (ENSSHAG00000009344) #33	FABP2 (ENSSHAG00000010832) #35	USP53 (ENSSHAG00000011019) #37	MYOZ2 (ENSSHAG00000011793)	SYNPO2 (ENSSHAG00000012401)	ENSSHAG00000022135 #19	SEC24D (ENSSHAG00000014053)	METTL14 (ENSSHAG00000014237)
Marsupialia	ANCESTRAL SPECIES	194																ENSGT00940000155372.p #22	ENSGT00940000153582.b.a.a.a.a.a.b.a.a.a.b
Opossum	DUPLICATION
Opossum	DUPLICATION
Opossum	DUPLICATION
Opossum	DUPLICATION
Opossum	DUPLICATION
Opossum	MODERN SPECIES		ENSMODG00000013815	ENSMODG00000013808	ENSMODG00000013803	ENSMODG00000013799	ENSMODG00000037505	ENSMODG00000036976	IL36RN (ENSMODG00000013795)	IL1F10 (ENSMODG00000013791)	IL1RN (ENSMODG00000013787)	ENSMODG00000013780	PAX8 (ENSMODG00000013770)	ENSMODG00000013749	ENSMODG00000051252 #22	ENSMODG00000041607 #22	ENSMODG00000049183 #22	ENSMODG00000041386 #22	ENSMODG00000043707	ENSMODG00000013304	ENSMODG00000041448	ENSMODG00000015028	ENSMODG00000040195	ENSMODG00000038872	ENSMODG00000048189	ENSMODG00000050568	ENSMODG00000013078	ENSMODG00000047600	ENSMODG00000041819	ENSMODG00000043703	ENSMODG00000040889	ENSMODG00000041973	ENSMODG00000013074
Opossum	MODERN SPECIES		NT5DC4 (ENSMODG00000013862)	ENSMODG00000013858	ENSMODG00000013821	ENSMODG00000013815	ENSMODG00000013808	ENSMODG00000013803	ENSMODG00000013799	ENSMODG00000037505	ENSMODG00000036976	IL36RN (ENSMODG00000013795)	IL1F10 (ENSMODG00000013791)	IL1RN (ENSMODG00000013787)	ENSMODG00000013780	PAX8 (ENSMODG00000013770)	ENSMODG00000013749	ENSMODG00000051252 #22	ENSMODG00000041607 #22	ENSMODG00000049183 #22	ENSMODG00000041386 #22	ENSMODG00000043707	ENSMODG00000013304	ENSMODG00000041448	ENSMODG00000015028	ENSMODG00000040195	ENSMODG00000038872	ENSMODG00000048189	ENSMODG00000050568	ENSMODG00000013078	ENSMODG00000047600	ENSMODG00000041819	ENSMODG00000043703
Opossum	MODERN SPECIES		ENSMODG00000041973	ENSMODG00000040889	ENSMODG00000043703	ENSMODG00000041819	ENSMODG00000047600	ENSMODG00000013078	ENSMODG00000050568	ENSMODG00000048189	ENSMODG00000038872	ENSMODG00000040195	ENSMODG00000015028	ENSMODG00000041448	ENSMODG00000013304	ENSMODG00000043707	ENSMODG00000041386 #22	ENSMODG00000049183 #22	ENSMODG00000041607 #22	ENSMODG00000051252 #22	ENSMODG00000013749	PAX8 (ENSMODG00000013770)	ENSMODG00000013780	IL1RN (ENSMODG00000013787)	IL1F10 (ENSMODG00000013791)	IL36RN (ENSMODG00000013795)	ENSMODG00000036976	ENSMODG00000037505	ENSMODG00000013799	ENSMODG00000013803	ENSMODG00000013808	ENSMODG00000013815	ENSMODG00000013821
Opossum	MODERN SPECIES		ENSMODG00000040889	ENSMODG00000043703	ENSMODG00000041819	ENSMODG00000047600	ENSMODG00000013078	ENSMODG00000050568	ENSMODG00000048189	ENSMODG00000038872	ENSMODG00000040195	ENSMODG00000015028	ENSMODG00000041448	ENSMODG00000013304	ENSMODG00000043707	ENSMODG00000041386 #22	ENSMODG00000049183 #22	ENSMODG00000041607 #22	ENSMODG00000051252 #22	ENSMODG00000013749	PAX8 (ENSMODG00000013770)	ENSMODG00000013780	IL1RN (ENSMODG00000013787)	IL1F10 (ENSMODG00000013791)	IL36RN (ENSMODG00000013795)	ENSMODG00000036976	ENSMODG00000037505	ENSMODG00000013799	ENSMODG00000013803	ENSMODG00000013808	ENSMODG00000013815	ENSMODG00000013821	ENSMODG00000013858
Opossum	MODERN SPECIES	1	NKIRAS2 (ENSMODG00000014766)	DNAJC7 (ENSMODG00000014760)	ENSMODG00000045840	CNP (ENSMODG00000014742)	ODAD4 (ENSMODG00000014741)	ACLY (ENSMODG00000014738)	KLHL11 (ENSMODG00000014725)	KLHL10 (ENSMODG00000014695)	NT5C3B (ENSMODG00000014723)	FKBP10 (ENSMODG00000014716)	P3H4 (ENSMODG00000014702)	JUP (ENSMODG00000014681)	ENSMODG00000014659	GAST (ENSMODG00000014656)	ENSMODG00000014651	ENSMODG00000024140 #22	ENSMODG00000014647	KRT17 (ENSMODG00000014587)	ENSMODG00000014628	ENSMODG00000040104	ENSMODG00000036809	ENSMODG00000036504	ENSMODG00000014625	ENSMODG00000014608	KRT15 (ENSMODG00000038367)	KRT36 (ENSMODG00000014529)	KRT35 (ENSMODG00000014510)	KRT32 (ENSMODG00000014396)	ENSMODG00000014275	ENSMODG00000014371	ENSMODG00000014241
Opossum	MODERN SPECIES	3	VN2R588 (ENSMODG00000036618)	VN2R585 (ENSMODG00000037262)	VN2R583 (ENSMODG00000036613)	VN2R577 (ENSMODG00000050323)	VN2R572 (ENSMODG00000038178)	VN2R571 (ENSMODG00000045022)	VN2R570 (ENSMODG00000050169)	VN2R566 (ENSMODG00000045864)	VN2R565 (ENSMODG00000049940)	VN2R563 (ENSMODG00000050464)	ENSMODG00000005370	ENSMODG00000023638	ENSMODG00000046341	ENSMODG00000023640	ENSMODG00000037711	ENSMODG00000042368 #22	ENSMODG00000045549	ENSMODG00000042750	ENSMODG00000005132	ENSMODG00000023642	ENSMODG00000044795	ENSMODG00000027844	ENSMODG00000014356	ENSMODG00000047727	ENSMODG00000047931	ENSMODG00000037771	ENSMODG00000027664	ENSMODG00000036449	ENSMODG00000042523	ENSMODG00000023650	ENSMODG00000023655
Marsupialia_b	ANCESTRAL SPECIES	159																ENSGT00940000155372.p #22	ENSGT00940000153582.b.a.a.a.a.a.b.a.a.a.b
Diprotodontia	ANCESTRAL SPECIES	108									ENSGT01050000244815.A.c.b.a.a.b	ENSGT00940000162481	ENSGT01060000248581.C.a.b.a.b	ENSGT00960000186612.B.a.a.b.a.a	ENSGT00940000154249.a.b.b.a	ENSGT00940000154488.A.b.b.a.b	ENSGT00940000154650.c.b.b	ENSGT00940000155372.p #22	ENSGT00940000153582.b.a.a.a.a.a.b.a.a.a.b
Diprotodontia_a	ANCESTRAL SPECIES	45	ENSGT01020000230389.b.a.b.d.b.a.a.a.a	ENSGT01020000230389.b.a.b.d.a.a	ENSGT01020000230389.b.a.b.d.a.b.a.a	ENSGT00940000162074	ENSGT01090000260044.A.a.b.b	ENSGT01100000263574.b.j.b.a.a.a.a.b	ENSGT01100000263574.b.j.b.a.a.a.a.a	ENSGT01100000263574.b.j.b.a.a.b	ENSGT01050000244815.A.c.b.a.a.b	ENSGT00940000162481	ENSGT01060000248581.C.a.b.a.b	ENSGT00960000186612.B.a.a.b.a.a	ENSGT00940000154249.a.b.b.a	ENSGT00940000154488.A.b.b.a.b	ENSGT00940000154650.c.b.b	ENSGT00940000155372.p #22	ENSGT00940000153582.b.a.a.a.a.a.b.a.a.a.b	ENSGT00950000182890.D.c.b.a.a.b.a.b.a.a.b	ENSGT00940000154650.c.b.a	ENSGT00950000182890.B.b.h.b.b	ENSGT00950000182890.B.b.h.b.a.b	ENSGT00950000182890.B.b.h.b.a.a
koala	MODERN SPECIES	100	ENSPCIG00000002399	ENSPCIG00000013033	ENSPCIG00000013032	ENSPCIG00000019155	ENSPCIG00000019153	ENSPCIG00000019151	ENSPCIG00000014009	ENSPCIG00000035909	ENSPCIG00000036582	ENSPCIG00000023919	ENSPCIG00000005404	ENSPCIG00000026459	ENSPCIG00000026464	ENSPCIG00000020784	ENSPCIG00000033784	ENSPCIG00000025510 #22	ENSPCIG00000037205	ENSPCIG00000030189	ENSPCIG00000031286	ENSPCIG00000020307	ENSPCIG00000034429	ENSPCIG00000037352	ENSPCIG00000035674	ENSPCIG00000009122	ENSPCIG00000007883	ENSPCIG00000017681	ENSPCIG00000033225	ENSPCIG00000035885	ENSPCIG00000023906	ENSPCIG00000030789	ENSPCIG00000005615
Common wonbat	MODERN SPECIES	912	ENSVURG00010016047	ENSVURG00010016060	ENSVURG00010016095	ENSVURG00010016159	ENSVURG00010016273	ENSVURG00010016301	ENSVURG00010016312	ENSVURG00010016315	ENSVURG00010016324	ENSVURG00010016337	ENSVURG00010016346	ENSVURG00010016358	ENSVURG00010016366	ENSVURG00010016374	ENSVURG00010016390	ENSVURG00010016406 #22	ENSVURG00010016415	ENSVURG00010016458	ENSVURG00010016621	ENSVURG00010016649	ENSVURG00010016656	ENSVURG00010016665	ENSVURG00010016674	ENSVURG00010016680	ENSVURG00010016690	ENSVURG00010016700	ENSVURG00010016706	ENSVURG00010016714	ENSVURG00010016731	ENSVURG00010016750	ENSVURG00010016758
Wallaby	MODERN SPECIES	14427																ENSMEUG00000008916 #22