Vertebrata	ANCESTRAL SPECIES	423																ENSGT00940000156532 #22	ENSGT00940000156031
Gnathostomata	ANCESTRAL SPECIES	658													ENSGT00940000166348	ENSGT00940000155126 #19	ENSGT00390000004553 #20	ENSGT00940000156532 #22	ENSGT00720000108792.B #23
Euteleostomi	ANCESTRAL SPECIES	40	ENSGT00720000108822	ENSGT00940000153969.b	ENSGT00940000165503	ENSGT00940000161996	ENSGT00940000157440	ENSGT00390000016151	ENSGT00940000154486.b.a.a.b	ENSGT00940000154486.b.b	ENSGT00940000155311.B	ENSGT00940000161997.a	ENSGT00940000166348	ENSGT00940000155126 #19	ENSGT00940000168433	ENSGT00390000004553 #20	ENSGT00940000157295 #21	ENSGT00940000156532 #22	ENSGT00720000108792.B #23	ENSGT00940000157137 #25	ENSGT00940000154695 #26	ENSGT00390000005983	ENSGT00940000157192 #28	ENSGT00530000063186.b.b #29	ENSGT01030000234570.d.a #31	ENSGT00940000157652 #32	ENSGT00530000063688.a #34	ENSGT00390000001447 #35	ENSGT00640000091496 #36	ENSGT00940000156597.b #37	ENSGT00940000159094	ENSGT00940000156307.b	ENSGT00390000012547.b
Sarcopterygii	ANCESTRAL SPECIES	95	ENSGT00720000108822	ENSGT00940000153969.b	ENSGT00940000165503	ENSGT00940000161996	ENSGT00940000157440	ENSGT00390000016151	ENSGT00940000154486.b.a.a.b	ENSGT00940000154486.b.b	ENSGT00940000155311.B	ENSGT00940000161997.a	ENSGT00940000166348	ENSGT00940000155126 #19	ENSGT00940000168433	ENSGT00390000004553 #20	ENSGT00940000157295 #21	ENSGT00940000156532 #22	ENSGT00720000108792.B #23	ENSGT00940000157137 #25	ENSGT00940000154695 #26	ENSGT00390000005983	ENSGT00940000157192 #28	ENSGT00530000063186.b.b #29	ENSGT01030000234570.d.a #31	ENSGT00940000157652 #32	ENSGT00530000063688.a #34	ENSGT00390000001447 #35	ENSGT00640000091496 #36	ENSGT00940000156597.b #37	ENSGT00940000159094	ENSGT00940000156307.b	ENSGT00390000012547.b
Tetrapoda	ANCESTRAL SPECIES	6	ENSGT00940000156462.C	ENSGT00940000156462.B	ENSGT00950000183138.a.b	ENSGT00950000185272	ENSGT00940000161839	ENSGT00530000063564.b	ENSGT00940000165690	ENSGT00940000159224	ENSGT00940000154349	ENSGT00940000163794	ENSGT00940000166348	ENSGT00940000155126 #19	ENSGT00940000168433	ENSGT00390000004553 #20	ENSGT00940000157295 #21	ENSGT00940000156532 #22	ENSGT00720000108792.B #23	ENSGT00940000157137 #25	ENSGT00940000154695 #26	ENSGT00390000005983	ENSGT00940000157192 #28	ENSGT00530000063186.b.b #29	ENSGT01030000234570.d.a #31	ENSGT00940000157652 #32	ENSGT00530000063688.a #34	ENSGT00390000001447 #35	ENSGT00640000091496 #36	ENSGT00940000156597.b #37	ENSGT00940000159094	ENSGT00940000156307.b	ENSGT00390000012547.b
Amniota	ANCESTRAL SPECIES	6	ENSGT00940000156462.B	ENSGT00950000183138.a.b	ENSGT00390000005489	ENSGT00940000161839	ENSGT00530000063564.b	ENSGT00940000165690	ENSGT00390000016508	ENSGT00940000159224	ENSGT00940000154349	ENSGT00940000163794	ENSGT00390000008926	ENSGT00940000155126 #19	ENSGT00940000168433	ENSGT00390000004553 #20	ENSGT00940000157295 #21	ENSGT00940000156532 #22	ENSGT00720000108792.B #23	ENSGT00940000155053 #24	ENSGT00940000157137 #25	ENSGT00940000154695 #26	ENSGT00940000157192 #28	ENSGT00530000063186.b.b #29	ENSGT01030000234570.d.a #31	ENSGT00940000157652 #32	ENSGT00530000063688.a #34	ENSGT00390000001447 #35	ENSGT01030000235330	ENSGT00640000091496 #36	ENSGT00940000156597.b #37	ENSGT00940000159094	ENSGT00940000156307.b
Mammalia	ANCESTRAL SPECIES	6											ENSGT00390000008926	ENSGT00940000155126 #19	ENSGT00940000168433	ENSGT00390000004553 #20	ENSGT00940000157295 #21	ENSGT00940000156532 #22	ENSGT00720000108792.B #23	ENSGT00940000155053 #24	ENSGT00940000157137 #25	ENSGT00940000154695 #26	ENSGT00940000157192 #28	ENSGT00530000063186.b.b #29	ENSGT01030000234570.d.a #31	ENSGT00940000157652 #32	ENSGT00530000063688.a #34	ENSGT00390000001447 #35	ENSGT01030000235330	ENSGT00640000091496 #36	ENSGT00940000156597.b #37	ENSGT00940000159094	ENSGT00940000156307.b
Theria	ANCESTRAL SPECIES	5	ENSGT00940000155400.B	ENSGT00390000000539	ENSGT00940000155890	ENSGT00940000158542	ENSGT00390000016988.a.b	ENSGT00940000157608	ENSGT00940000158179	ENSGT00940000153239.A	ENSGT00390000015276	ENSGT00940000156882	ENSGT00390000008926	ENSGT00940000155126 #19	ENSGT00940000168433	ENSGT00390000004553 #20	ENSGT00940000157295 #21	ENSGT00940000156532 #22	ENSGT00720000108792.B #23	ENSGT00940000155053 #24	ENSGT00940000157137 #25	ENSGT00940000154695 #26	ENSGT00940000157192 #28	ENSGT00530000063186.b.b #29	ENSGT01030000234570.d.a #31	ENSGT00940000157652 #32	ENSGT00530000063688.a #34	ENSGT00390000001447 #35	ENSGT01030000235330	ENSGT00640000091496 #36	ENSGT00940000156597.b #37	ENSGT00940000159094	ENSGT00940000156307.b
Eutheria	ANCESTRAL SPECIES	10	ENSGT00940000155400.B	ENSGT00390000000539	ENSGT00940000155890	ENSGT00940000158542	ENSGT00390000016988.a.b	ENSGT00940000157608	ENSGT00940000158179	ENSGT00940000153239.A	ENSGT00390000015276	ENSGT00940000156882	ENSGT00390000008926	ENSGT00940000155126 #19	ENSGT00940000168433	ENSGT00390000004553 #20	ENSGT00940000157295 #21	ENSGT00940000156532 #22	ENSGT00720000108792.B #23	ENSGT00940000155053 #24	ENSGT00940000157137 #25	ENSGT00940000154695 #26	ENSGT00940000157192 #28	ENSGT00530000063186.b.b #29	ENSGT01030000234570.d.a #31	ENSGT00940000157652 #32	ENSGT00530000063688.a #34	ENSGT00390000001447 #35	ENSGT01030000235330	ENSGT00640000091496 #36	ENSGT00940000156597.b #37	ENSGT00940000159094	ENSGT00940000156307.b
Boreoeutheria	ANCESTRAL SPECIES	14	ENSGT00940000155400.B	ENSGT00390000000539	ENSGT00940000155890	ENSGT00940000158542	ENSGT00390000016988.a.b	ENSGT00940000157608	ENSGT00940000158179	ENSGT00940000153239.A	ENSGT00390000015276	ENSGT00940000156882	ENSGT00390000008926	ENSGT00940000155126 #19	ENSGT00940000168433	ENSGT00390000004553 #20	ENSGT00940000157295 #21	ENSGT00940000156532 #22	ENSGT00720000108792.B #23	ENSGT00940000155053 #24	ENSGT00940000157137 #25	ENSGT00390000002231.d.b	ENSGT00940000154695 #26	ENSGT00940000157192 #28	ENSGT00530000063186.b.b #29	ENSGT01030000234570.d.a #31	ENSGT00940000157652 #32	ENSGT00530000063688.a #34	ENSGT00390000001447 #35	ENSGT01030000235330	ENSGT00640000091496 #36	ENSGT00940000156597.b #37	ENSGT00940000159094
Euarchontoglires	ANCESTRAL SPECIES	14	ENSGT00940000155400.B	ENSGT00390000000539	ENSGT00940000155890	ENSGT00940000158542	ENSGT00390000016988.a.b	ENSGT00940000157608	ENSGT00940000158179	ENSGT00940000153239.A	ENSGT00390000015276	ENSGT00940000156882	ENSGT00390000008926	ENSGT00940000155126 #19	ENSGT00940000168433	ENSGT00390000004553 #20	ENSGT00940000157295 #21	ENSGT00940000156532 #22	ENSGT00720000108792.B #23	ENSGT00940000155053 #24	ENSGT00940000157137 #25	ENSGT00390000002231.d.b	ENSGT00940000154695 #26	ENSGT00940000157192 #28	ENSGT00530000063186.b.b #29	ENSGT01030000234570.d.a #31	ENSGT00940000157652 #32	ENSGT00530000063688.a #34	ENSGT00390000001447 #35	ENSGT00640000091496 #36	ENSGT00940000156597.b #37	ENSGT00940000159094	ENSGT00940000156307.b
Primates	ANCESTRAL SPECIES	13	ENSGT00940000154044.a.b	ENSGT00940000155400.B	ENSGT00390000000539	ENSGT00940000155890	ENSGT00940000158542	ENSGT00390000016988.a.b	ENSGT00940000157608	ENSGT00940000158179	ENSGT00940000153239.A	ENSGT00390000015276	ENSGT00940000156882	ENSGT00390000008926	ENSGT00940000155126 #19	ENSGT00390000004553 #20	ENSGT00940000157295 #21	ENSGT00940000156532 #22	ENSGT00720000108792.B #23	ENSGT00940000155053 #24	ENSGT00940000157137 #25	ENSGT00390000002231.d.b	ENSGT00940000154695 #26	ENSGT00940000157192 #28	ENSGT00530000063186.b.b #29	ENSGT01030000234570.d.a #31	ENSGT00940000157652 #32	ENSGT00530000063688.a #34	ENSGT00390000001447 #35	ENSGT00640000091496 #36	ENSGT00940000156597.b #37	ENSGT00940000159094	ENSGT00940000156307.b
Haplorrhini	ANCESTRAL SPECIES	10	ENSGT00940000154044.a.b	ENSGT00940000155400.B	ENSGT00390000000539	ENSGT00940000155890	ENSGT00940000158542	ENSGT00390000016988.a.b	ENSGT00940000157608	ENSGT00940000158179	ENSGT00940000153239.A	ENSGT00390000015276	ENSGT00940000156882	ENSGT00390000008926	ENSGT00940000155126 #19	ENSGT00390000004553 #20	ENSGT00940000157295 #21	ENSGT00940000156532 #22	ENSGT00720000108792.B #23	ENSGT00940000155053 #24	ENSGT00940000157137 #25	ENSGT00390000002231.d.b	ENSGT00940000154695 #26	ENSGT00940000157192 #28	ENSGT00530000063186.b.b #29	ENSGT01030000234570.d.a #31	ENSGT00940000157652 #32	ENSGT00530000063688.a #34	ENSGT00390000001447 #35	ENSGT00640000091496 #36	ENSGT00940000156597.b #37	ENSGT00940000159094	ENSGT00940000156307.b
Simiiformes	ANCESTRAL SPECIES	15	ENSGT00390000000539	ENSGT00940000155890	ENSGT00940000158542	ENSGT00390000016988.b	ENSGT00550000074820.h.cb	ENSGT00390000016988.a.b	ENSGT00940000157608	ENSGT00940000158179	ENSGT00940000153239.A	ENSGT00390000015276	ENSGT00940000156882	ENSGT00390000008926	ENSGT00940000155126 #19	ENSGT00390000004553 #20	ENSGT00940000157295 #21	ENSGT00940000156532 #22	ENSGT00720000108792.B #23	ENSGT00940000155053 #24	ENSGT00940000157137 #25	ENSGT00390000002231.d.b	ENSGT00940000154695 #26	ENSGT00940000157192 #28	ENSGT00910000147691	ENSGT00530000063186.b.b #29	ENSGT01030000234570.d.a #31	ENSGT00940000157652 #32	ENSGT00530000063688.a #34	ENSGT00390000001447 #35	ENSGT00640000091496 #36	ENSGT00940000156597.b #37	ENSGT00940000159094
Catarrhini	ANCESTRAL SPECIES	16	ENSGT00390000000539	ENSGT00940000155890	ENSGT00940000158542	ENSGT00390000016988.a.a.a.a.a.b.d	ENSGT00550000074820.h.cb	ENSGT00390000016988.a.b	ENSGT00940000157608	ENSGT00940000158179	ENSGT00940000153239.A	ENSGT00390000015276	ENSGT00940000156882	ENSGT00390000008926	ENSGT00940000155126 #19	ENSGT00390000004553 #20	ENSGT00940000157295 #21	ENSGT00940000156532 #22	ENSGT00720000108792.B #23	ENSGT00940000155053 #24	ENSGT00940000157137 #25	ENSGT00390000002231.d.b	ENSGT00940000154695 #26	ENSGT00940000157192 #28	ENSGT00910000147691	ENSGT00530000063186.b.b #29	ENSGT01030000234570.d.a #31	ENSGT00910000147420	ENSGT00940000157652 #32	ENSGT00530000063688.a #34	ENSGT00390000001447.p.b #35	ENSGT00640000091496 #36	ENSGT00940000156597.b #37
Cercopithecidae	ANCESTRAL SPECIES	13	ENSGT00940000155890	ENSGT00940000158542	ENSGT00390000016988.a.b	ENSGT00550000074820.h.cb	ENSGT00390000016988.b	ENSGT00940000157608	ENSGT00940000158179	ENSGT00910000147196	ENSGT00940000153239.A	ENSGT00390000015276	ENSGT00940000156882	ENSGT00390000008926	ENSGT00940000155126 #19	ENSGT00390000004553 #20	ENSGT00940000157295 #21	ENSGT00940000156532 #22	ENSGT00720000108792.B #23	ENSGT00940000155053 #24	ENSGT00940000157137 #25	ENSGT00390000002231.d.b	ENSGT00940000154695 #26	ENSGT00940000157192 #28	ENSGT00910000147691	ENSGT00530000063186.b.b #29	ENSGT01030000234570.d.a #31	ENSGT00910000147420	ENSGT00940000157652 #32	ENSGT00530000063688.a #34	ENSGT00390000001447.q ##35	ENSGT00390000001447.p.b #35	ENSGT00640000091496 #36
Cercopithecinae	ANCESTRAL SPECIES	11	ENSGT00910000147575	ENSGT00390000000539	ENSGT00940000155890	ENSGT00940000158542	ENSGT00390000016988.a.b	ENSGT00940000157608	ENSGT00940000158179	ENSGT00910000147196	ENSGT00940000153239.A	ENSGT00390000015276	ENSGT00940000156882	ENSGT00390000008926	ENSGT00940000155126 #19	ENSGT00390000004553 #20	ENSGT00940000157295 #21	ENSGT00940000156532 #22	ENSGT00720000108792.B #23	ENSGT00940000155053 #24	ENSGT00940000157137 #25	ENSGT00390000002231.d.b	ENSGT00940000154695 #26	ENSGT00940000157192 #28	ENSGT00530000063186.b.b #29	ENSGT01030000234570.d.a #31	ENSGT00940000157652 #32	ENSGT00530000063688.a #34	ENSGT00390000001447.q ##35	ENSGT00640000091496 #36	ENSGT00940000156597.b #37	ENSGT00390000015257.s.a	ENSGT00940000159094
Cercopithecinae_a	ANCESTRAL SPECIES	16	ENSGT00910000147575	ENSGT00390000000539	ENSGT00940000155890	ENSGT00940000158542	ENSGT00390000016988.a.b	ENSGT00940000157608	ENSGT00940000158179	ENSGT00910000147196	ENSGT00940000153239.A	ENSGT00390000015276	ENSGT00940000156882	ENSGT00390000008926	ENSGT00940000155126 #19	ENSGT00390000004553 #20	ENSGT00940000157295 #21	ENSGT00940000156532 #22	ENSGT00720000108792.B #23	ENSGT00940000155053 #24	ENSGT00940000157137 #25	ENSGT00390000002231.d.b	ENSGT00940000154695 #26	ENSGT00940000157192 #28	ENSGT00530000063186.b.b #29	ENSGT01030000234570.d.a #31	ENSGT00940000157652 #32	ENSGT00530000063688.a #34	ENSGT00910000148013 #33	ENSGT00390000001447.p.b #35	ENSGT00640000091496 #36	ENSGT00940000156597.b #37	ENSGT00390000015257.s.a
Cercopithecinae_b	ANCESTRAL SPECIES	10	ENSGT00390000000539	ENSGT00940000155890	ENSGT00940000158542	ENSGT00390000016988.a.a.a.a.a.b.d	ENSGT00390000016988.b	ENSGT00940000157608	ENSGT00940000158179	ENSGT00910000147196	ENSGT00940000153239.A	ENSGT00390000015276	ENSGT00940000156882	ENSGT00390000008926	ENSGT00940000155126 #19	ENSGT00390000004553 #20	ENSGT00940000157295 #21	ENSGT00940000156532 #22	ENSGT00720000108792.B #23	ENSGT00940000155053 #24	ENSGT00940000157137 #25	ENSGT00940000154695 #26	ENSGT00940000157192 #28	ENSGT00530000063186.b.b #29	ENSGT00510000046986.n.a.d.b #30	ENSGT01030000234570.d.a #31	ENSGT00940000157652 #32	ENSGT00530000063688.a #34	ENSGT00910000148013 #33	ENSGT00390000001447.p.b #35	ENSGT00640000091496 #36	ENSGT00940000156597.b #37	ENSGT00390000015257.s.a
Cercopithecinae_d	ANCESTRAL SPECIES		ENSGT00560000078504	ENSGT00910000147575	ENSGT00940000155890	ENSGT00940000158542	ENSGT00390000016988.b	ENSGT00940000157608	ENSGT00940000158179	ENSGT00910000147196	ENSGT00940000153239.A	ENSGT00390000015276	ENSGT00940000156882	ENSGT00390000008926	ENSGT00940000155126 #19	ENSGT00390000004553 #20	ENSGT00940000157295 #21	ENSGT00940000156532 #22	ENSGT00720000108792.B #23	ENSGT00940000155053 #24	ENSGT00940000157137 #25	ENSGT00940000154695 #26	ENSGT00910000147161 #27	ENSGT00910000147691	ENSGT00940000157192 #28	ENSGT00530000063186.b.b #29	ENSGT00510000046986.n.a.d.b #30	ENSGT01030000234570.d.a #31	ENSGT00940000157652 #32	ENSGT00530000063688.a #34	ENSGT00910000148013 #33	ENSGT00390000001447.p.b #35	ENSGT00640000091496 #36
Sooty mangabey	MODERN SPECIES	570													FN1 (ENSCATG00000034092) #19	ATIC (ENSCATG00000033414) #20	ABCA12 (ENSCATG00000042293) #21	BARD1 (ENSCATG00000043060) #22	VWC2L (ENSCATG00000039480) #23	SPAG16 (ENSCATG00000032997) #24	IKZF2 (ENSCATG00000029418) #25	ERBB4 (ENSCATG00000043272) #26	ENSCATG00000003304 #27	CPS1 (ENSCATG00000033305) #28	LANCL1 (ENSCATG00000038900) #29	ENSCATG00000031803 #30	MYL1 (ENSCATG00000044624) #31	ACADL (ENSCATG00000041550) #32	ENSCATG00000006457 #33	KANSL1L (ENSCATG00000043995) #34	ENSCATG00000043868 #35	UNC80 (ENSCATG00000041534) #36	MAP2 (ENSCATG00000042916) #37
Drill	MODERN SPECIES	1551															ABCA12 (ENSMLEG00000034879) #21	BARD1 (ENSMLEG00000031483) #22	VWC2L (ENSMLEG00000030943) #23
Olive baboon	MODERN SPECIES	1	TNS1 (ENSPANG00000009910)	TNP1 (ENSPANG00000037114)	IGFBP5 (ENSPANG00000050266)	IGFBP2 (ENSPANG00000024435)	ENSPANG00000036088	SMARCAL1 (ENSPANG00000017812)	MARCHF4 (ENSPANG00000022150)	XRCC5 (ENSPANG00000016342)	TMEM169 (ENSPANG00000018887)	ENSPANG00000042211	PECR (ENSPANG00000009641)	ENSPANG00000041320	FN1 (ENSPANG00000005725) #19	ATIC (ENSPANG00000012147) #20	ABCA12 (ENSPANG00000005668) #21	BARD1 (ENSPANG00000019723) #22	VWC2L (ENSPANG00000046744) #23	ENSPANG00000037591	SPAG16 (ENSPANG00000011416) #24	IKZF2 (ENSPANG00000016694) #25	ENSPANG00000050738	ENSPANG00000048059	ERBB4 (ENSPANG00000020599) #26	CPS1 (ENSPANG00000008478) #28	LANCL1 (ENSPANG00000043351) #29	ENSPANG00000050010 #30	MYL1 (ENSPANG00000005181) #31	KANSL1L (ENSPANG00000000746) #34	ENSPANG00000005182 ##35	UNC80 (ENSPANG00000024759) #36	MAP2 (ENSPANG00000019944) #37
Macaca	ANCESTRAL SPECIES	15	ENSGT00560000078504	ENSGT00910000147575	ENSGT00940000155890	ENSGT00940000158542	ENSGT00390000016988.a.b	ENSGT00940000157608	ENSGT00940000158179	ENSGT00910000147196	ENSGT00940000153239.A	ENSGT00390000015276	ENSGT00940000156882	ENSGT00390000008926	ENSGT00940000155126 #19	ENSGT00390000004553 #20	ENSGT00940000157295 #21	ENSGT00940000156532 #22	ENSGT00720000108792.B #23	ENSGT00940000155053 #24	ENSGT00940000157137 #25	ENSGT00940000154695 #26	ENSGT00940000157192 #28	ENSGT00530000063186.b.b #29	ENSGT01030000234570.d.a #31	ENSGT00940000157652 #32	ENSGT00530000063688.a #34	ENSGT00910000148013 #33	ENSGT00390000001447.p.b #35	ENSGT00640000091496 #36	ENSGT00940000156597.b #37	ENSGT00950000183099.u.a.e.i.a	ENSGT00940000159094
Macaca_a	ANCESTRAL SPECIES	17	ENSGT00940000154044.a.b	ENSGT00940000155400.B	ENSGT01100000263539.b.b.b.b.a.a.a.b.b.b	ENSGT00910000147575	ENSGT00940000155890	ENSGT00940000158542	ENSGT00390000016988.a.b	ENSGT00940000157608	ENSGT00940000158179	ENSGT00940000153239.A	ENSGT00390000015276	ENSGT00940000156882	ENSGT00940000155126 #19	ENSGT00390000004553 #20	ENSGT00940000157295 #21	ENSGT00940000156532 #22	ENSGT00720000108792.B #23	ENSGT00940000155053 #24	ENSGT00940000157137 #25	ENSGT00390000002231.d.b	ENSGT00940000154695 #26	ENSGT00940000157192 #28	ENSGT00530000063186.b.b #29	ENSGT01030000234570.d.a #31	ENSGT00530000063688.a #34	ENSGT00390000001447.q ##35	ENSGT00640000091496 #36	ENSGT00940000156597.b #37	ENSGT00950000183099.u.a.e.i.a	ENSGT00960000191503.d	ENSGT00940000159094
Rhesus	MODERN SPECIES	3	ENSMMUG00000065034	TNP1 (ENSMMUG00000019257)	ENSMMUG00000063058	IGFBP5 (ENSMMUG00000041480)	IGFBP2 (ENSMMUG00000054183)	RPL37A (ENSMMUG00000019544)	ENSMMUG00000006818	SMARCAL1 (ENSMMUG00000019539)	MARCHF4 (ENSMMUG00000020824)	XRCC5 (ENSMMUG00000001927)	TMEM169 (ENSMMUG00000053869)	PECR (ENSMMUG00000017964)	FN1 (ENSMMUG00000012321) #19	ATIC (ENSMMUG00000012318) #20	ABCA12 (ENSMMUG00000014813) #21	BARD1 (ENSMMUG00000005700) #22	VWC2L (ENSMMUG00000054519) #23	ENSMMUG00000065281	ENSMMUG00000064880	SPAG16 (ENSMMUG00000000382) #24	IKZF2 (ENSMMUG00000000381) #25	ENSMMUG00000061342	ENSMMUG00000058114	ERBB4 (ENSMMUG00000001674) #26	CPS1 (ENSMMUG00000010508) #28	LANCL1 (ENSMMUG00000054937) #29	MYL1 (ENSMMUG00000010519) #31	KANSL1L (ENSMMUG00000010515) #34	RPE (ENSMMUG00000010513) ##35	UNC80 (ENSMMUG00000002809) #36	MAP2 (ENSMMUG00000018741) #37
Crab-eating macaque	MODERN SPECIES	3	ENSMFAG00000060168	ENSMFAG00000042551	IGFBP5 (ENSMFAG00000040116)	IGFBP2 (ENSMFAG00000040045)	RPL37A (ENSMFAG00000043631)	SMARCAL1 (ENSMFAG00000034369)	MARCHF4 (ENSMFAG00000045960)	XRCC5 (ENSMFAG00000039293)	TMEM169 (ENSMFAG00000055690)	PECR (ENSMFAG00000003448)	ENSMFAG00000063886	ENSMFAG00000055847	FN1 (ENSMFAG00000032168) #19	ATIC (ENSMFAG00000044630) #20	ABCA12 (ENSMFAG00000041527) #21	BARD1 (ENSMFAG00000032566) #22	VWC2L (ENSMFAG00000004450) #23	ENSMFAG00000056823	SPAG16 (ENSMFAG00000036303) #24	IKZF2 (ENSMFAG00000049387) #25	ENSMFAG00000059453	ENSMFAG00000047331	ERBB4 (ENSMFAG00000042352) #26	CPS1 (ENSMFAG00000044079) #28	LANCL1 (ENSMFAG00000041765) #29	MYL1 (ENSMFAG00000031549) #31	KANSL1L (ENSMFAG00000031878) #34	ENSMFAG00000001492 ##35	UNC80 (ENSMFAG00000038823) #36	MAP2 (ENSMFAG00000037191) #37	ENSMFAG00000040051
Pig-tailed macaque	MODERN SPECIES	570	ENSMNEG00000011932	ENSMNEG00000031022	IGFBP5 (ENSMNEG00000035172)	IGFBP2 (ENSMNEG00000040591)	RPL37A (ENSMNEG00000031830)	SMARCAL1 (ENSMNEG00000036205)	MARCHF4 (ENSMNEG00000033537)	ENSMNEG00000006764	XRCC5 (ENSMNEG00000015360)	TMEM169 (ENSMNEG00000034924)	PECR (ENSMNEG00000043315)	MREG (ENSMNEG00000029517)	FN1 (ENSMNEG00000029457) #19	ATIC (ENSMNEG00000033660) #20	ABCA12 (ENSMNEG00000031040) #21	BARD1 (ENSMNEG00000042003) #22	VWC2L (ENSMNEG00000044264) #23	SPAG16 (ENSMNEG00000033132) #24	IKZF2 (ENSMNEG00000031320) #25	ERBB4 (ENSMNEG00000041797) #26	ENSMNEG00000017162 #27	ENSMNEG00000034167	CPS1 (ENSMNEG00000035547) #28	LANCL1 (ENSMNEG00000029637) #29	MYL1 (ENSMNEG00000036767) #31	ACADL (ENSMNEG00000012188) #32	ENSMNEG00000014156 #33	KANSL1L (ENSMNEG00000035464) #34	ENSMNEG00000040500 #35	UNC80 (ENSMNEG00000035845) #36	MAP2 (ENSMNEG00000038593) #37
Vervet Monkey	MODERN SPECIES	1	RUFY4 (ENSCSAG00000008961)	TNS1 (ENSCSAG00000008987)	ENSCSAG00000009002	ENSCSAG00000009019	TNP1 (ENSCSAG00000009030)	IGFBP5 (ENSCSAG00000009041)	IGFBP2 (ENSCSAG00000009048)	SMARCAL1 (ENSCSAG00000009061)	MARCHF4 (ENSCSAG00000009072)	XRCC5 (ENSCSAG00000009095)	TMEM169 (ENSCSAG00000009111)	PECR (ENSCSAG00000009122)	MREG (ENSCSAG00000009131)	FN1 (ENSCSAG00000009162) #19	ABCA12 (ENSCSAG00000009303) #21	BARD1 (ENSCSAG00000009338) #22	VWC2L (ENSCSAG00000009346) #23	ENSCSAG00000009388 #24	IKZF2 (ENSCSAG00000009405) #25	ENSCSAG00000009457 #26	ENSCSAG00000009490 #26	CPS1 (ENSCSAG00000009759) #28	LANCL1 (ENSCSAG00000009844) #29	MYL1 (ENSCSAG00000009850) #31	ACADL (ENSCSAG00000009898) #32	KANSL1L (ENSCSAG00000009924) #34	ENSCSAG00000009931 ##35	UNC80 (ENSCSAG00000009965) #36	MAP2 (ENSCSAG00000009974) #37	ENSCSAG00000009983	ENSCSAG00000018772
Rhinopithecus	ANCESTRAL SPECIES	313	ENSGT00910000147575	ENSGT00940000155890	ENSGT00940000158542	ENSGT00550000074820.h.cb	ENSGT00390000016988.b	ENSGT00940000157608	ENSGT00940000158179	ENSGT00910000147196	ENSGT00940000153239.A	ENSGT00390000015276	ENSGT00940000156882	ENSGT00390000008926	ENSGT00940000155126 #19	ENSGT00390000004553.k #20	ENSGT00940000157295 #21	ENSGT00940000156532 #22	ENSGT00720000108792.B #23
Black snub-nosed monkey	MODERN SPECIES	1830																BARD1 (ENSRBIG00000043580) #22	VWC2L (ENSRBIG00000036468) #23
Golden snub-nosed monkey	MODERN SPECIES	1649													FN1 (ENSRROG00000034811) #19	ENSRROG00000024282 #20	ABCA12 (ENSRROG00000045065) #21	BARD1 (ENSRROG00000028323) #22	VWC2L (ENSRROG00000001986) #23
Hominoidea	ANCESTRAL SPECIES	15	ENSGT00940000155890	ENSGT00940000158542	ENSGT00550000074820.h.bb.b.b	ENSGT00390000016988.b	ENSGT00550000074820.h.cb	ENSGT00390000016988.a.b	ENSGT00940000157608	ENSGT00940000158179	ENSGT00940000153239.A	ENSGT00390000015276	ENSGT00940000156882	ENSGT00390000008926	ENSGT00940000155126 #19	ENSGT00390000004553 #20	ENSGT00940000157295 #21	ENSGT00940000156532 #22	ENSGT00720000108792.B #23	ENSGT00940000155053 #24	ENSGT00940000157137 #25	ENSGT00390000002231.d.b	ENSGT00940000154695 #26	ENSGT00940000157192 #28	ENSGT00530000063186.b.b #29	ENSGT01030000234570.d.a #31	ENSGT00910000147420	ENSGT00940000157652 #32	ENSGT00530000063688.a #34	ENSGT00390000001447.p.b #35	ENSGT00640000091496 #36	ENSGT00940000156597.b #37	ENSGT00940000159094
Hominidae	ANCESTRAL SPECIES	17	ENSGT00560000078504	ENSGT00390000000539	ENSGT00940000155890	ENSGT00940000158542	ENSGT00550000074820.h.cb	ENSGT00390000016988.a.b	ENSGT00940000157608	ENSGT00940000158179	ENSGT00940000153239.A	ENSGT00390000015276	ENSGT00940000156882	ENSGT00390000008926	ENSGT00940000155126 #19	ENSGT00390000004553 #20	ENSGT00940000157295 #21	ENSGT00940000156532 #22	ENSGT00720000108792.B #23	ENSGT00940000155053 #24	ENSGT00940000157137 #25	ENSGT00390000002231.d.b	ENSGT00940000154695 #26	ENSGT00940000157192 #28	ENSGT00530000063186.b.b #29	ENSGT01030000234570.d.a #31	ENSGT00910000147420	ENSGT00940000157652 #32	ENSGT00530000063688.a #34	ENSGT00390000001447.q ##35	ENSGT00640000091496 #36	ENSGT00940000156597.b #37	ENSGT00940000159094
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	14	ENSGT00390000000539	ENSGT00940000155890	ENSGT00940000158542	ENSGT00390000016988.a.b	ENSGT00550000074820.h.cb	ENSGT00390000016988.b	ENSGT00940000157608	ENSGT00940000158179	ENSGT00940000153239.A	ENSGT00390000015276.i	ENSGT00940000156882	ENSGT00390000008926	ENSGT00940000155126 #19	ENSGT00390000004553 #20	ENSGT00940000157295 #21	ENSGT00940000156532 #22	ENSGT00720000108792.B #23	ENSGT00940000155053 #24	ENSGT00940000157137 #25	ENSGT00910000148020	ENSGT00940000154695 #26	ENSGT00940000157192 #28	ENSGT00530000063186.b.b #29	ENSGT01030000234570.d.a #31	ENSGT00910000147420	ENSGT00940000157652 #32	ENSGT00530000063688.a #34	ENSGT00390000001447.q ##35	ENSGT00390000001447.p.b #35	ENSGT00640000091496 #36	ENSGT00940000156597.b #37
Homo/Pan group	ANCESTRAL SPECIES	13	ENSGT00390000000539	ENSGT00940000155890	ENSGT00940000158542	ENSGT00390000016988.a.b	ENSGT00550000074820.h.cb	ENSGT00390000016988.b	ENSGT00940000157608	ENSGT00940000158179	ENSGT00940000153239.A	ENSGT00390000015276.i	ENSGT00940000156882	ENSGT00390000008926	ENSGT00940000155126 #19	ENSGT00390000004553 #20	ENSGT00940000157295 #21	ENSGT00940000156532 #22	ENSGT00720000108792.B #23	ENSGT00940000155053 #24	ENSGT00940000157137 #25	ENSGT00910000148020	ENSGT00940000154695 #26	ENSGT00940000157192 #28	ENSGT00530000063186.b.b #29	ENSGT01030000234570.d.a #31	ENSGT00910000147420	ENSGT00940000157652 #32	ENSGT00530000063688.a #34	ENSGT00390000001447.p.b #35	ENSGT00640000091496 #36	ENSGT00940000156597.b #37	ENSGT00940000159094
Pan	ANCESTRAL SPECIES	12	ENSGT00560000078504	ENSGT00390000000539	ENSGT00940000155890	ENSGT00940000158542	ENSGT00550000074820.h.cb	ENSGT00390000016988.b	ENSGT00940000157608	ENSGT00940000158179	ENSGT00940000153239.A	ENSGT00390000015276.i	ENSGT00940000156882	ENSGT00390000008926	ENSGT00940000155126 #19	ENSGT00390000004553 #20	ENSGT00940000157295 #21	ENSGT00940000156532 #22	ENSGT00720000108792.B #23	ENSGT00940000155053 #24	ENSGT00940000157137 #25	ENSGT00910000148020	ENSGT00940000154695 #26	ENSGT00940000157192 #28	ENSGT00530000063186.b.b #29	ENSGT01030000234570.d.a #31	ENSGT00910000147420	ENSGT00940000157652 #32	ENSGT00530000063688.a #34	ENSGT00390000001447.p.b #35	ENSGT00640000091496 #36	ENSGT00940000156597.b #37	ENSGT00940000159094
Bonobo	MODERN SPECIES	15	TNS1 (ENSPPAG00000040585)	TNP1 (ENSPPAG00000026261)	IGFBP5 (ENSPPAG00000026552)	ENSPPAG00000025854	ENSPPAG00000026236	ENSPPAG00000027287	SMARCAL1 (ENSPPAG00000042500)	MARCHF4 (ENSPPAG00000035784)	XRCC5 (ENSPPAG00000032493)	TMEM169 (ENSPPAG00000043337)	PECR (ENSPPAG00000040758)	MREG (ENSPPAG00000024976)	FN1 (ENSPPAG00000041188) #19	ATIC (ENSPPAG00000031346) #20	ABCA12 (ENSPPAG00000027092) #21	BARD1 (ENSPPAG00000043112) #22	VWC2L (ENSPPAG00000037418) #23	SPAG16 (ENSPPAG00000043643) #24	IKZF2 (ENSPPAG00000041873) #25	ENSPPAG00000023325	ERBB4 (ENSPPAG00000041527) #26	CPS1 (ENSPPAG00000037514) #28	LANCL1 (ENSPPAG00000039753) #29	MYL1 (ENSPPAG00000032667) #31	ENSPPAG00000009402	ACADL (ENSPPAG00000035916) #32	KANSL1L (ENSPPAG00000038917) #34	ENSPPAG00000034521 #35	UNC80 (ENSPPAG00000038207) #36	MAP2 (ENSPPAG00000042145) #37	PTH2R (ENSPPAG00000000087)
Chimpanzee	MODERN SPECIES	15	ENSPTRG00000041548	TNP1 (ENSPTRG00000012904)	IGFBP5 (ENSPTRG00000012903)	IGFBP2 (ENSPTRG00000012901)	ENSPTRG00000012900	ENSPTRG00000050901	SMARCAL1 (ENSPTRG00000012898)	MARCHF4 (ENSPTRG00000012897)	XRCC5 (ENSPTRG00000012896)	TMEM169 (ENSPTRG00000012895)	PECR (ENSPTRG00000012894)	MREG (ENSPTRG00000012893)	FN1 (ENSPTRG00000012892) #19	ATIC (ENSPTRG00000012891) #20	ABCA12 (ENSPTRG00000012889) #21	BARD1 (ENSPTRG00000012888) #22	VWC2L (ENSPTRG00000012886) #23	SPAG16 (ENSPTRG00000012885) #24	IKZF2 (ENSPTRG00000048797) #25	ENSPTRG00000050921	ERBB4 (ENSPTRG00000012883) #26	CPS1 (ENSPTRG00000012881) #28	LANCL1 (ENSPTRG00000012880) #29	MYL1 (ENSPTRG00000012879) #31	ENSPTRG00000044780	ACADL (ENSPTRG00000012876) #32	ENSPTRG00000043540 #33	KANSL1L (ENSPTRG00000012875) #34	ENSPTRG00000048818 #35	UNC80 (ENSPTRG00000012873) #36	MAP2 (ENSPTRG00000012869) #37
Human	MODERN SPECIES	11	RUFY4 (ENSG00000188282)	TNS1 (ENSG00000079308)	TNP1 (ENSG00000118245)	IGFBP5 (ENSG00000115461)	IGFBP2 (ENSG00000115457)	RPL37A (ENSG00000197756)	SMARCAL1 (ENSG00000138375)	MARCHF4 (ENSG00000144583)	XRCC5 (ENSG00000079246)	TMEM169 (ENSG00000163449)	PECR (ENSG00000115425)	MREG (ENSG00000118242)	FN1 (ENSG00000115414) #19	ATIC (ENSG00000138363) #20	ABCA12 (ENSG00000144452) #21	BARD1 (ENSG00000138376) #22	VWC2L (ENSG00000174453) #23	SPAG16 (ENSG00000144451) #24	IKZF2 (ENSG00000030419) #25	ERBB4 (ENSG00000178568) #26	CPS1 (ENSG00000021826) #28	LANCL1 (ENSG00000115365) #29	MYL1 (ENSG00000168530) #31	ACADL (ENSG00000115361) #32	KANSL1L (ENSG00000144445) #34	RPE (ENSG00000197713) ##35	UNC80 (ENSG00000144406) #36	MAP2 (ENSG00000078018) #37	PTH2R (ENSG00000144407)	PIKFYVE (ENSG00000115020)	IDH1 (ENSG00000138413)
Gorilla	MODERN SPECIES	15	ENSGGOG00000022571	IGFBP5 (ENSGGOG00000016946)	IGFBP2 (ENSGGOG00000011721)	ENSGGOG00000026130	RPL37A (ENSGGOG00000014827)	SMARCAL1 (ENSGGOG00000014815)	MARCHF4 (ENSGGOG00000000174)	XRCC5 (ENSGGOG00000011471)	TMEM169 (ENSGGOG00000011466)	ENSGGOG00000041701	PECR (ENSGGOG00000015630)	MREG (ENSGGOG00000027103)	FN1 (ENSGGOG00000015010) #19	ATIC (ENSGGOG00000007916) #20	ABCA12 (ENSGGOG00000011952) #21	BARD1 (ENSGGOG00000014597) #22	VWC2L (ENSGGOG00000016106) #23	SPAG16 (ENSGGOG00000043689) #24	IKZF2 (ENSGGOG00000011301) #25	ENSGGOG00000039432	ERBB4 (ENSGGOG00000014309) #26	CPS1 (ENSGGOG00000028226) #28	LANCL1 (ENSGGOG00000041237) #29	MYL1 (ENSGGOG00000011991) #31	ENSGGOG00000036486	ACADL (ENSGGOG00000006541) #32	KANSL1L (ENSGGOG00000011150) #34	ENSGGOG00000043889 ##35	UNC80 (ENSGGOG00000010917) #36	MAP2 (ENSGGOG00000027310) #37	ENSGGOG00000028471
Orangutan	MODERN SPECIES	15	ENSPPYG00000033641	TNP1 (ENSPPYG00000013158)	ENSPPYG00000032583	IGFBP2 (ENSPPYG00000013156)	ENSPPYG00000035590	RPL37A (ENSPPYG00000025878)	SMARCAL1 (ENSPPYG00000013155)	MARCHF4 (ENSPPYG00000013154)	XRCC5 (ENSPPYG00000013152)	TMEM169 (ENSPPYG00000037480)	PECR (ENSPPYG00000013150)	MREG (ENSPPYG00000013149)	FN1 (ENSPPYG00000013148) #19	ATIC (ENSPPYG00000013146) #20	ABCA12 (ENSPPYG00000013145) #21	BARD1 (ENSPPYG00000013144) #22	VWC2L (ENSPPYG00000013143) #23	ENSPPYG00000034405	SPAG16 (ENSPPYG00000013141) #24	IKZF2 (ENSPPYG00000013139) #25	ENSPPYG00000035873	ERBB4 (ENSPPYG00000013138) #26	CPS1 (ENSPPYG00000013137) #28	LANCL1 (ENSPPYG00000033825) #29	MYL1 (ENSPPYG00000013135) #31	ENSPPYG00000013134	ACADL (ENSPPYG00000037453) #32	KANSL1L (ENSPPYG00000013133) #34	RPE (ENSPPYG00000030957) ##35	UNC80 (ENSPPYG00000013131) #36	MAP2 (ENSPPYG00000013128) #37
Gibbon	MODERN SPECIES	14	TNP1 (ENSNLEG00000007281)	IGFBP5 (ENSNLEG00000007279)	IGFBP2 (ENSNLEG00000007277)	ENSNLEG00000028695	ENSNLEG00000007276	SMARCAL1 (ENSNLEG00000007272)	MARCHF4 (ENSNLEG00000007271)	ENSNLEG00000033854	XRCC5 (ENSNLEG00000007267)	TMEM169 (ENSNLEG00000034416)	PECR (ENSNLEG00000007265)	MREG (ENSNLEG00000007262)	FN1 (ENSNLEG00000007224) #19	ATIC (ENSNLEG00000007215) #20	ABCA12 (ENSNLEG00000007208) #21	BARD1 (ENSNLEG00000007205) #22	VWC2L (ENSNLEG00000007204) #23	SPAG16 (ENSNLEG00000007201) #24	IKZF2 (ENSNLEG00000031188) #25	ERBB4 (ENSNLEG00000007195) #26	CPS1 (ENSNLEG00000007187) #28	LANCL1 (ENSNLEG00000007182) #29	MYL1 (ENSNLEG00000007180) #31	ENSNLEG00000007179	ACADL (ENSNLEG00000007175) #32	ENSNLEG00000007174 #34	ENSNLEG00000027381 #35	UNC80 (ENSNLEG00000007162) #36	MAP2 (ENSNLEG00000007156) #37	ENSNLEG00000035981	PTH2R (ENSNLEG00000007155)
Platyrrhini	ANCESTRAL SPECIES	9	ENSGT00940000155890	ENSGT00390000002752.x.d	ENSGT00940000158542	ENSGT00390000016988.b	ENSGT00550000074820.h.cb	ENSGT00390000016988.a.b	ENSGT00940000157608	ENSGT00940000158179	ENSGT00940000153239.A.a	ENSGT00390000015276	ENSGT00940000156882	ENSGT00390000008926	ENSGT00940000155126 #19	ENSGT00390000004553.m.a.b #20	ENSGT00940000157295 #21	ENSGT00940000156532 #22	ENSGT00720000108792.B #23	ENSGT00940000155053 #24	ENSGT00940000157137 #25	ENSGT00940000154695 #26	ENSGT00940000157192 #28	ENSGT00910000147691	ENSGT00530000063186.b.b #29	ENSGT01030000234570.d.a #31	ENSGT00940000157652 #32	ENSGT00530000063688.a #34	ENSGT00390000001447 #35	ENSGT00640000091496 #36	ENSGT00940000156597.b #37	ENSGT00940000159094	ENSGT00940000156307.b
Cebidae	ANCESTRAL SPECIES	11	ENSGT00940000155890	ENSGT00390000002752.x.d	ENSGT00940000158542	ENSGT00390000016988.b	ENSGT00550000074820.h.cb	ENSGT00390000016988.a.b	ENSGT00940000157608	ENSGT00940000158179	ENSGT00940000153239.A.a	ENSGT00390000015276	ENSGT00940000156882	ENSGT00390000008926	ENSGT00940000155126 #19	ENSGT00390000004553.m.a.b #20	ENSGT00940000157295 #21	ENSGT00940000156532 #22	ENSGT00720000108792.B #23	ENSGT00940000155053 #24	ENSGT00940000157137 #25	ENSGT00940000154695 #26	ENSGT00940000157192 #28	ENSGT00530000063186.b.b #29	ENSGT01030000234570.d.a #31	ENSGT00530000063688.a #34	ENSGT00390000001447 #35	ENSGT00640000091496 #36	ENSGT00940000156597.b #37	ENSGT00940000159094	ENSGT00940000156307.b	ENSGT00390000012547.b.b.a	ENSGT00940000156150.f.a
Cebidae_a	ANCESTRAL SPECIES	16	ENSGT00390000000539	ENSGT00940000155890	ENSGT00390000002752.x.d	ENSGT00940000158542	ENSGT00550000074820.h.cb	ENSGT00390000016988.a.b	ENSGT00940000157608	ENSGT00940000158179	ENSGT00940000153239.A.a	ENSGT00390000015276	ENSGT00940000156882	ENSGT00390000008926	ENSGT00940000155126 #19	ENSGT00390000004553.m.a.b #20	ENSGT00940000157295 #21	ENSGT00940000156532 #22	ENSGT00720000108792.B #23	ENSGT00940000155053 #24	ENSGT00940000157137 #25	ENSGT00940000154695 #26	ENSGT00940000157192 #28	ENSGT00530000063186.b.b #29	ENSGT01030000234570.d.a #31	ENSGT00530000063688.a #34	ENSGT00390000001447 #35	ENSGT00640000091496 #36	ENSGT00940000156597.b #37	ENSGT00940000159094	ENSGT00940000156307.b	ENSGT00390000012547.b.b.a	ENSGT00940000156150.f.a
Capuchin	MODERN SPECIES	89	ENSCCAG00000020405	ENSCCAG00000021500	SMARCAL1 (ENSCCAG00000022646)	ASNA1 (ENSCCAG00000020440)	MARCHF4 (ENSCCAG00000031877)	XRCC5 (ENSCCAG00000027147)	ENSCCAG00000020388	TMEM169 (ENSCCAG00000030518)	PECR (ENSCCAG00000028783)	ENSCCAG00000031458	MREG (ENSCCAG00000034986)	FN1 (ENSCCAG00000021281) #19	ENSCCAG00000022620 #20	ABCA12 (ENSCCAG00000029993) #21	ENSCCAG00000020726	BARD1 (ENSCCAG00000021151) #22	VWC2L (ENSCCAG00000021422) #23	SPAG16 (ENSCCAG00000027929) #24	IKZF2 (ENSCCAG00000029869) #25	ENSCCAG00000016584	ERBB4 (ENSCCAG00000036465) #26
Bolivian squirrel monkey	MODERN SPECIES	56	TNP1 (ENSSBOG00000033620)	IGFBP5 (ENSSBOG00000019704)	ENSSBOG00000030539	ENSSBOG00000019110	ENSSBOG00000021060	RPL37A (ENSSBOG00000032570)	SMARCAL1 (ENSSBOG00000023338)	MARCHF4 (ENSSBOG00000031621)	XRCC5 (ENSSBOG00000029325)	TMEM169 (ENSSBOG00000035035)	ENSSBOG00000022001	MREG (ENSSBOG00000030269)	FN1 (ENSSBOG00000030941) #19	ATIC (ENSSBOG00000035246) #20	ABCA12 (ENSSBOG00000021012) #21	BARD1 (ENSSBOG00000024817) #22	VWC2L (ENSSBOG00000027487) #23	SPAG16 (ENSSBOG00000028079) #24	IKZF2 (ENSSBOG00000020703) #25	ERBB4 (ENSSBOG00000030062) #26	CPS1 (ENSSBOG00000001070) #28	LANCL1 (ENSSBOG00000020922) #29	MYL1 (ENSSBOG00000033791) #31	KANSL1L (ENSSBOG00000033776) #34	ENSSBOG00000019098 #35	UNC80 (ENSSBOG00000036149) #36	MAP2 (ENSSBOG00000036242) #37	ENSSBOG00000025322	PTH2R (ENSSBOG00000022880)	PIKFYVE (ENSSBOG00000031867)	ENSSBOG00000025738
Marmoset	MODERN SPECIES	18	IGFBP5 (ENSCJAG00000062900)	IGFBP2 (ENSCJAG00000012426)	ENSCJAG00000057313	SMARCAL1 (ENSCJAG00000012377)	MARCHF4 (ENSCJAG00000012374)	XRCC5 (ENSCJAG00000012291)	TMEM169 (ENSCJAG00000068065)	PECR (ENSCJAG00000012258)	MREG (ENSCJAG00000037790)	ENSCJAG00000083626	FN1 (ENSCJAG00000011714) #19	ENSCJAG00000011695 #20	ENSCJAG00000072179	ABCA12 (ENSCJAG00000011510) #21	ENSCJAG00000082638	BARD1 (ENSCJAG00000011473) #22	ENSCJAG00000040361	VWC2L (ENSCJAG00000052055) #23	ENSCJAG00000083858	ENSCJAG00000058419	ENSCJAG00000075827	ENSCJAG00000057539	SPAG16 (ENSCJAG00000011448) #24	IKZF2 (ENSCJAG00000043858) #25	ENSCJAG00000055705	ENSCJAG00000074375	ERBB4 (ENSCJAG00000011307) #26	CPS1 (ENSCJAG00000010985) #28	LANCL1 (ENSCJAG00000038860) #29	MYL1 (ENSCJAG00000010924) #31	KANSL1L (ENSCJAG00000010851) #34
Mas night monkey	MODERN SPECIES	357	IGFBP5 (ENSANAG00000025346)	ENSANAG00000037097	IGFBP2 (ENSANAG00000024221)	ENSANAG00000034888	ENSANAG00000033950	SMARCAL1 (ENSANAG00000034980)	MARCHF4 (ENSANAG00000027574)	ENSANAG00000035228	XRCC5 (ENSANAG00000028373)	TMEM169 (ENSANAG00000022360)	PECR (ENSANAG00000020624)	ENSANAG00000026766	FN1 (ENSANAG00000027282) #19	ENSANAG00000020375 #20	ABCA12 (ENSANAG00000035285) #21	BARD1 (ENSANAG00000026965) #22	ENSANAG00000034992	VWC2L (ENSANAG00000022669) #23	SPAG16 (ENSANAG00000021194) #24	IKZF2 (ENSANAG00000020083) #25	ERBB4 (ENSANAG00000034026) #26	CPS1 (ENSANAG00000036815) #28	ENSANAG00000036535	ENSANAG00000033281 #29	MYL1 (ENSANAG00000032098) #31	ACADL (ENSANAG00000034362) #32	KANSL1L (ENSANAG00000028662) #34	ENSANAG00000021491 #35	UNC80 (ENSANAG00000022890) #36	MAP2 (ENSANAG00000031569) #37	ENSANAG00000036032
Tarsier	MODERN SPECIES	879																ENSTSYG00000006130 #22
Strepsirrhini	ANCESTRAL SPECIES	10	ENSGT00940000155400.B	ENSGT00390000000539	ENSGT00940000155890	ENSGT00940000158542	ENSGT00390000016988.a.b	ENSGT00390000016988.b	ENSGT00940000157608	ENSGT00940000158179	ENSGT00940000153239.A	ENSGT00390000015276	ENSGT00940000156882	ENSGT00390000008926	ENSGT00940000155126 #19	ENSGT00390000004553 #20	ENSGT00940000157295.e #21	ENSGT00940000156532 #22	ENSGT00720000108792.B #23	ENSGT00940000155053 #24	ENSGT00940000157137 #25	ENSGT00390000002231.d.b	ENSGT00940000154695 #26	ENSGT00940000157192 #28	ENSGT00530000063186.b.b #29	ENSGT01030000234570.d.a #31	ENSGT00940000157652 #32	ENSGT00530000063688.a #34	ENSGT00390000001447 #35	ENSGT00640000091496 #36	ENSGT00940000156597.b #37	ENSGT00940000159094	ENSGT00940000156307.b
Lemuriformes	ANCESTRAL SPECIES	5	ENSGT00940000155400.B	ENSGT00390000000539	ENSGT00940000155890	ENSGT00940000158542	ENSGT00390000016988.a.b	ENSGT00390000016988.b	ENSGT00940000157608	ENSGT00940000158179	ENSGT00940000153239.A	ENSGT00390000015276	ENSGT00940000156882	ENSGT00390000008926	ENSGT00940000155126 #19	ENSGT00390000004553 #20	ENSGT00940000157295.e #21	ENSGT00940000156532 #22	ENSGT00720000108792.B #23	ENSGT00940000155053 #24	ENSGT00940000157137 #25	ENSGT00390000002231.d.b	ENSGT00940000154695 #26	ENSGT00940000157192 #28	ENSGT00530000063186.b.b #29	ENSGT01030000234570.d.a #31	ENSGT00940000157652 #32	ENSGT00530000063688.a #34	ENSGT00390000001447 #35	ENSGT00640000091496 #36	ENSGT00940000156597.b #37	ENSGT00940000159094	ENSGT00940000156307.b
Mouse lemur	MODERN SPECIES	30	TNS1 (ENSMICG00000017467)	ENSMICG00000035435	TNP1 (ENSMICG00000045994)	IGFBP5 (ENSMICG00000028205)	IGFBP2 (ENSMICG00000008989)	RPL37A (ENSMICG00000008988)	SMARCAL1 (ENSMICG00000008967)	MARCHF4 (ENSMICG00000027749)	XRCC5 (ENSMICG00000008946)	TMEM169 (ENSMICG00000044265)	PECR (ENSMICG00000036951)	MREG (ENSMICG00000033346)	FN1 (ENSMICG00000014594) #19	ENSMICG00000044310 #20	ABCA12 (ENSMICG00000014502) #21	BARD1 (ENSMICG00000014488) #22	VWC2L (ENSMICG00000034610) #23	SPAG16 (ENSMICG00000013876) #24	ENSMICG00000043031	ATIC (ENSMICG00000014573) #20	IKZF2 (ENSMICG00000013862) #25	ENSMICG00000037305	ERBB4 (ENSMICG00000036699) #26	CPS1 (ENSMICG00000010886) #28	LANCL1 (ENSMICG00000033807) #29	MYL1 (ENSMICG00000010008) #31	ACADL (ENSMICG00000009991) #32	KANSL1L (ENSMICG00000009963) #34	ENSMICG00000009953 #35	UNC80 (ENSMICG00000009921) #36	MAP2 (ENSMICG00000009887) #37
Lemuriformes_a	ANCESTRAL SPECIES	15	ENSGT00390000000539	ENSGT00940000155890	ENSGT00940000158542	ENSGT00390000016988.a.b	ENSGT00390000016988.b	ENSGT00940000157608	ENSGT00940000158179	ENSGT00940000153239.A	ENSGT00390000015276	ENSGT00940000156882	ENSGT00390000008926	ENSGT00940000155126 #19	ENSGT00390000004553 #20	ENSGT00940000157295.e #21	ENSGT00940000157295.f #21	ENSGT00940000156532 #22	ENSGT00720000108792.B #23	ENSGT00940000155053 #24	ENSGT00940000157137 #25	ENSGT00390000002231.d.b	ENSGT00940000154695 #26	ENSGT00940000157192 #28	ENSGT00530000063186.b.b #29	ENSGT01030000234570.d.a #31	ENSGT00940000157652 #32	ENSGT00530000063688.a #34	ENSGT00390000001447 #35	ENSGT00640000091496 #36	ENSGT00940000156597.b #37	ENSGT00940000159094	ENSGT00940000156307.b
Greater bamboo lemur	MODERN SPECIES	1162													ENSPSMG00000001279	ENSPSMG00000001301 #21	ENSPSMG00000001319	BARD1 (ENSPSMG00000001538) #22	VWC2L (ENSPSMG00000001684) #23	SPAG16 (ENSPSMG00000001710) #24	IKZF2 (ENSPSMG00000001774) #25	ENSPSMG00000001924	ERBB4 (ENSPSMG00000002053) #26	ENSPSMG00000002194
Coquerels sifaka	MODERN SPECIES	500								MARCHF4 (ENSPCOG00000021290)	ENSPCOG00000013913	TMEM169 (ENSPCOG00000013793)	PECR (ENSPCOG00000014454)	MREG (ENSPCOG00000016864)	FN1 (ENSPCOG00000024595) #19	ATIC (ENSPCOG00000024839) #20	ABCA12 (ENSPCOG00000022336) #21	BARD1 (ENSPCOG00000001956) #22	VWC2L (ENSPCOG00000001080) #23
Bushbaby	MODERN SPECIES	128	TNP1 (ENSOGAG00000008996)	IGFBP5 (ENSOGAG00000024780)	IGFBP2 (ENSOGAG00000003363)	ENSOGAG00000031606	ENSOGAG00000000817	SMARCAL1 (ENSOGAG00000001980)	MARCHF4 (ENSOGAG00000028676)	XRCC5 (ENSOGAG00000001977)	ENSOGAG00000032096	TMEM169 (ENSOGAG00000004438)	PECR (ENSOGAG00000004437)	MREG (ENSOGAG00000002252)	FN1 (ENSOGAG00000005042) #19	ATIC (ENSOGAG00000005039) #20	ABCA12 (ENSOGAG00000016828) #21	BARD1 (ENSOGAG00000009078) #22	VWC2L (ENSOGAG00000004042) #23	IKZF2 (ENSOGAG00000016680) #25	ENSOGAG00000010768 #26	ENSOGAG00000028178 #26	CPS1 (ENSOGAG00000005623) #28	LANCL1 (ENSOGAG00000005620) #29	MYL1 (ENSOGAG00000009848) #31	ENSOGAG00000027184	ACADL (ENSOGAG00000009844) #32	KANSL1L (ENSOGAG00000002780) #34	ENSOGAG00000002778 #35	UNC80 (ENSOGAG00000002771) #36	ENSOGAG00000025605 #37	ENSOGAG00000024989	PTH2R (ENSOGAG00000007106)
Euarchontoglires_A	ANCESTRAL SPECIES	13	ENSGT00940000155400.B	ENSGT00390000000539	ENSGT00940000155890	ENSGT00940000158542	ENSGT00390000016988.a.b	ENSGT00940000157608	ENSGT00940000158179	ENSGT00940000153239.A	ENSGT00390000015276	ENSGT00940000156882	ENSGT00390000008926	ENSGT00940000155126 #19	ENSGT00940000168433	ENSGT00390000004553 #20	ENSGT00940000157295 #21	ENSGT00940000156532 #22	ENSGT00720000108792.B #23	ENSGT00940000155053 #24	ENSGT00940000157137 #25	ENSGT00390000002231.d.b	ENSGT00940000154695 #26	ENSGT00940000157192 #28	ENSGT00530000063186.b.b #29	ENSGT01030000234570.d.a #31	ENSGT00940000157652 #32	ENSGT00530000063688.a #34	ENSGT00390000001447 #35	ENSGT00640000091496 #36	ENSGT00940000156597.b #37	ENSGT00940000159094	ENSGT00940000156307.b
Tree shrew	MODERN SPECIES	1847																BARD1 (ENSTBEG00000015473) #22
Glires	ANCESTRAL SPECIES	14	ENSGT00940000155400.B	ENSGT00390000000539	ENSGT00940000155890	ENSGT00940000158542	ENSGT00390000016988.a.b	ENSGT00940000157608	ENSGT00940000158179	ENSGT00940000153239.A	ENSGT00390000015276	ENSGT00940000156882	ENSGT00390000008926	ENSGT00940000155126 #19	ENSGT00940000168433	ENSGT00390000004553 #20	ENSGT00940000157295 #21	ENSGT00940000156532 #22	ENSGT00720000108792.B #23	ENSGT00940000155053 #24	ENSGT00940000157137 #25	ENSGT00390000002231.d.b	ENSGT00940000154695 #26	ENSGT00940000157192 #28	ENSGT00530000063186.b.b #29	ENSGT01030000234570.d.a #31	ENSGT00940000157652 #32	ENSGT00530000063688.a #34	ENSGT00390000001447 #35	ENSGT00640000091496 #36	ENSGT00940000156597.b #37	ENSGT00940000159094	ENSGT00940000156307.b
Lagomorpha	ANCESTRAL SPECIES	13	ENSGT01050000244848.A.a.g.a	ENSGT00940000154044.a.b	ENSGT00940000155400.B	ENSGT00940000155890	ENSGT00940000158542	ENSGT00390000016988.a.b	ENSGT00940000157608	ENSGT00940000158179	ENSGT00940000153239.A	ENSGT00390000015276	ENSGT00940000156882	ENSGT00390000008926	ENSGT00940000155126 #19	ENSGT00390000004553 #20	ENSGT00940000157295 #21	ENSGT00940000156532 #22	ENSGT00720000108792.B #23	ENSGT00940000155053 #24	ENSGT00940000157137 #25	ENSGT00390000002231.d.b	ENSGT00940000154695 #26	ENSGT00940000157192 #28	ENSGT00530000063186.b.b.b #29	ENSGT01030000234570.d.a #31	ENSGT00940000157652 #32	ENSGT00530000063688.a #34	ENSGT00390000001447 #35	ENSGT00640000091496 #36	ENSGT00940000156597.b #37	ENSGT00940000158720.c.b	ENSGT00940000156307.b
Rabbit	MODERN SPECIES	18	ENSOCUG00000008561	ENSOCUG00000035553	ENSOCUG00000039089	SMARCAL1 (ENSOCUG00000009891)	MARCHF4 (ENSOCUG00000025107)	XRCC5 (ENSOCUG00000006642)	TMEM169 (ENSOCUG00000004684)	PECR (ENSOCUG00000006636)	MREG (ENSOCUG00000006632)	ENSOCUG00000031308	ENSOCUG00000037486	ENSOCUG00000031511	FN1 (ENSOCUG00000010104) #19	ATIC (ENSOCUG00000001121) #20	ABCA12 (ENSOCUG00000017926) #21	BARD1 (ENSOCUG00000001552) #22	VWC2L (ENSOCUG00000014302) #23	ENSOCUG00000032906	SPAG16 (ENSOCUG00000014285) #24	ENSOCUG00000037270	IKZF2 (ENSOCUG00000007309) #25	ENSOCUG00000034291	ENSOCUG00000036328	ERBB4 (ENSOCUG00000009790) #26	ENSOCUG00000021317	ENSOCUG00000034876	CPS1 (ENSOCUG00000017716) #28	LANCL1 (ENSOCUG00000017711) #29	MYL1 (ENSOCUG00000014182) #31	KANSL1L (ENSOCUG00000017001) #34	ENSOCUG00000016995 #35
Pika	MODERN SPECIES	1563															ABCA12 (ENSOPRG00000009094) #21	BARD1 (ENSOPRG00000009077) #22
Rodentia	ANCESTRAL SPECIES	14	ENSGT00940000155400.B	ENSGT00390000000539	ENSGT00940000155890	ENSGT00940000158542	ENSGT00390000016988.a.b	ENSGT00940000157608	ENSGT00940000158179	ENSGT00940000153239.A	ENSGT00390000015276	ENSGT00940000156882	ENSGT00390000008926	ENSGT00940000155126 #19	ENSGT00940000168433	ENSGT00390000004553 #20	ENSGT00940000157295 #21	ENSGT00940000156532 #22	ENSGT00720000108792.B #23	ENSGT00940000155053 #24	ENSGT00940000157137 #25	ENSGT00390000002231.d.b	ENSGT00940000154695 #26	ENSGT00940000157192 #28	ENSGT00530000063186.b.b #29	ENSGT01030000234570.d.a #31	ENSGT00940000157652 #32	ENSGT00530000063688.a #34	ENSGT00390000001447 #35	ENSGT00640000091496 #36	ENSGT00940000156597.b #37	ENSGT00940000163272.a.a	ENSGT00940000159094
Rodentia_A	ANCESTRAL SPECIES	13	ENSGT00940000154044.a.b	ENSGT00940000155400.B	ENSGT00390000000539	ENSGT00940000155890	ENSGT00940000158542	ENSGT00390000016988.a.b	ENSGT00940000157608	ENSGT00940000158179	ENSGT00940000153239.A	ENSGT00390000015276	ENSGT00940000156882	ENSGT00390000008926	ENSGT00940000155126 #19	ENSGT00390000004553 #20	ENSGT00940000157295 #21	ENSGT00940000156532 #22	ENSGT00720000108792.B #23	ENSGT00940000155053 #24	ENSGT00940000157137 #25	ENSGT00940000154695 #26	ENSGT00940000157192 #28	ENSGT00530000063186.b.b #29	ENSGT01030000234570.d.a #31	ENSGT00940000157652 #32	ENSGT00530000063688.a #34	ENSGT00390000001447 #35	ENSGT00640000091496 #36	ENSGT00940000156597.b #37	ENSGT00940000163272.a.a	ENSGT00940000159094	ENSGT00940000156307.b
Hystricomorpha	ANCESTRAL SPECIES	28	ENSGT00940000154044.a.b	ENSGT00940000155400.B	ENSGT00390000000539	ENSGT00940000155890	ENSGT00940000158542	ENSGT00390000016988.a.b	ENSGT00940000157608	ENSGT00940000158179	ENSGT00940000153239.A	ENSGT00390000015276	ENSGT00940000156882	ENSGT00390000008926	ENSGT00940000155126 #19	ENSGT00390000004553 #20	ENSGT00940000157295 #21	ENSGT00940000156532 #22	ENSGT00720000108792.B #23	ENSGT00940000155053 #24	ENSGT00940000157137 #25	ENSGT00940000154695 #26	ENSGT00940000157192 #28	ENSGT00530000063186.b.b #29	ENSGT01030000234570.d.a #31	ENSGT00940000157652 #32	ENSGT00530000063688.a #34	ENSGT00390000001447 #35	ENSGT00640000091496 #36	ENSGT00940000156597.b #37	ENSGT00940000159094	ENSGT00940000156307.b	ENSGT00390000012547.b.c
Hystricomorpha_a	ANCESTRAL SPECIES	67												ENSGT00390000008926	ENSGT00940000155126 #19	ENSGT00390000004553 #20	ENSGT00940000157295 #21	ENSGT00940000156532 #22	ENSGT00720000108792.B #23	ENSGT00940000155053 #24	ENSGT00940000157137 #25	ENSGT00940000154695 #26	ENSGT00940000157192 #28	ENSGT00530000063186.b.b #29	ENSGT01030000234570.d.a #31	ENSGT00940000157652 #32	ENSGT00530000063688.a #34	ENSGT00390000001447 #35	ENSGT00640000091496 #36	ENSGT00940000156597.b #37	ENSGT00940000159094	ENSGT00940000156307.b	ENSGT00390000012547.b.d
Guinea pig	MODERN SPECIES	13												MREG (ENSCPOG00000038481)	FN1 (ENSCPOG00000012808) #19	ATIC (ENSCPOG00000012802) #20	ABCA12 (ENSCPOG00000005978) #21	BARD1 (ENSCPOG00000011499) #22	VWC2L (ENSCPOG00000013515) #23	IKZF2 (ENSCPOG00000013506) #25	ERBB4 (ENSCPOG00000011232) #26	ENSCPOG00000035740	CPS1 (ENSCPOG00000004146) #28	LANCL1 (ENSCPOG00000009439) #29	MYL1 (ENSCPOG00000009446) #31	ACADL (ENSCPOG00000009871) #32	KANSL1L (ENSCPOG00000001503) #34	ENSCPOG00000001502 #35	UNC80 (ENSCPOG00000008641) #36	ENSCPOG00000040677 #37	PTH2R (ENSCPOG00000027198)	PIKFYVE (ENSCPOG00000003863)	IDH1 (ENSCPOG00000013587)
Hystricomorpha_b	ANCESTRAL SPECIES	52												ENSGT00390000008926	ENSGT00940000155126 #19	ENSGT00390000004553 #20	ENSGT00940000157295 #21	ENSGT00940000156532 #22	ENSGT00720000108792.B #23	ENSGT00940000155053 #24	ENSGT00940000157137 #25	ENSGT00940000154695 #26	ENSGT00940000157192 #28	ENSGT00530000063186.b.b #29	ENSGT01030000234570.d.a #31	ENSGT00940000157652 #32	ENSGT00530000063688.a #34	ENSGT00390000001447 #35	ENSGT00640000091496 #36	ENSGT00940000156597.b #37	ENSGT00940000159094	ENSGT00940000156307.b	ENSGT00390000012547.b.d
Degu	MODERN SPECIES	57										ENSODEG00000007346	ENSODEG00000007771	ENSODEG00000007722	FN1 (ENSODEG00000008281) #19	ENSODEG00000008301 #20	ABCA12 (ENSODEG00000012235) #21	ENSODEG00000008221 #22	ENSODEG00000009279	VWC2L (ENSODEG00000008549) #23	ENSODEG00000007901	ENSODEG00000008353	ENSODEG00000008509 #24	IKZF2 (ENSODEG00000008010) #25	ERBB4 (ENSODEG00000009033) #26	ENSODEG00000013776	ENSODEG00000008980	CPS1 (ENSODEG00000007917) #28	ENSODEG00000008576	LANCL1 (ENSODEG00000013138) #29	MYL1 (ENSODEG00000007814) #31	ACADL (ENSODEG00000008088) #32	KANSL1L (ENSODEG00000008832) #34
Long-tailed chinchilla	MODERN SPECIES	164												MREG (ENSCLAG00000005783)	FN1 (ENSCLAG00000004804) #19	ATIC (ENSCLAG00000008276) #20	ABCA12 (ENSCLAG00000006672) #21	BARD1 (ENSCLAG00000007649) #22	VWC2L (ENSCLAG00000004321) #23	ENSCLAG00000004744 #24	IKZF2 (ENSCLAG00000003632) #25	ERBB4 (ENSCLAG00000006948) #26	CPS1 (ENSCLAG00000003104) #28	LANCL1 (ENSCLAG00000005272) #29	MYL1 (ENSCLAG00000004096) #31	ACADL (ENSCLAG00000004230) #32	KANSL1L (ENSCLAG00000005749) #34	ENSCLAG00000003444 #35	UNC80 (ENSCLAG00000004587) #36	MAP2 (ENSCLAG00000003473) #37	ENSCLAG00000003083	PTH2R (ENSCLAG00000003358)	PIKFYVE (ENSCLAG00000005225)
Naked mole-rat female	MODERN SPECIES	17	MARCHF4 (ENSHGLG00000016985)	XRCC5 (ENSHGLG00000015924)	ENSHGLG00000016206	TMEM169 (ENSHGLG00000043207)	ENSHGLG00000038070	ENSHGLG00000032001	ENSHGLG00000041086	ENSHGLG00000045074	MREG (ENSHGLG00000040698)	FN1 (ENSHGLG00000004089) #19	ATIC (ENSHGLG00000004192) #20	ENSHGLG00000004264	ENSHGLG00000004335	ABCA12 (ENSHGLG00000004765) #21	ENSHGLG00000049209	BARD1 (ENSHGLG00000048952) #22	VWC2L (ENSHGLG00000006216) #23	ENSHGLG00000045998	ENSHGLG00000007634 #24	ENSHGLG00000032302	IKZF2 (ENSHGLG00000015317) #25	ENSHGLG00000042334	ENSHGLG00000049981	ENSHGLG00000036818	ERBB4 (ENSHGLG00000015379) #26	ENSHGLG00000039921	CPS1 (ENSHGLG00000017911) #28	LANCL1 (ENSHGLG00000036257) #29	MYL1 (ENSHGLG00000048085) #31	ENSHGLG00000004628 #32	KANSL1L (ENSHGLG00000005747) #34
Sciuridae	ANCESTRAL SPECIES	10	ENSGT00940000154044.a.b	ENSGT00940000155400.B	ENSGT00390000000539	ENSGT00940000155890	ENSGT00940000158542	ENSGT00390000016988.a.b	ENSGT00940000157608	ENSGT00940000158179	ENSGT00940000153239.A	ENSGT00390000015276	ENSGT00940000156882	ENSGT00390000008926	ENSGT00940000155126 #19	ENSGT00390000004553 #20	ENSGT00940000157295 #21	ENSGT00940000156532 #22	ENSGT00720000108792.B #23	ENSGT00940000155053 #24	ENSGT00940000157137 #25	ENSGT00940000154695 #26	ENSGT00940000157192 #28	ENSGT00530000063186.b.b #29	ENSGT01030000234570.d.a #31	ENSGT00940000157652 #32	ENSGT00530000063688.a #34	ENSGT00390000001447 #35	ENSGT00640000091496 #36	ENSGT00940000156597.b #37	ENSGT00940000163272.a.a	ENSGT00940000159094	ENSGT00940000156307.b
Marmotini	ANCESTRAL SPECIES	2	ENSGT00940000154044.a.b	ENSGT00940000155400.B	ENSGT00390000000539	ENSGT00940000155890	ENSGT00940000158542	ENSGT00390000016988.a.b	ENSGT00940000157608	ENSGT00940000158179	ENSGT00940000153239.A	ENSGT00390000015276	ENSGT00940000156882	ENSGT00390000008926	ENSGT00940000155126 #19	ENSGT00390000004553 #20	ENSGT00940000157295 #21	ENSGT00940000156532 #22	ENSGT00720000108792.B #23	ENSGT00940000155053 #24	ENSGT00940000157137 #25	ENSGT00940000154695 #26	ENSGT00940000157192 #28	ENSGT00530000063186.b.b #29	ENSGT01030000234570.d.a #31	ENSGT00940000157652 #32	ENSGT00530000063688.a #34	ENSGT00390000001447 #35	ENSGT00640000091496 #36	ENSGT00940000156597.b #37	ENSGT00940000163272.a.a	ENSGT00940000159094	ENSGT00940000156307.b
Marmotini_b	ANCESTRAL SPECIES	167			ENSGT00390000000539	ENSGT00940000155890	ENSGT00940000158542	ENSGT00390000016988.a.b	ENSGT00940000157608	ENSGT00940000158179	ENSGT00940000153239.A	ENSGT00390000015276	ENSGT00940000156882	ENSGT00390000008926	ENSGT00940000155126 #19	ENSGT00390000004553 #20	ENSGT00940000157295 #21	ENSGT00940000156532 #22	ENSGT00720000108792.B #23	ENSGT00940000155053 #24	ENSGT00940000157137 #25	ENSGT00940000154695 #26	ENSGT00940000157192 #28	ENSGT00530000063186.b.b #29	ENSGT01030000234570.d.a #31	ENSGT00940000157652 #32	ENSGT00530000063688.a #34	ENSGT00390000001447 #35	ENSGT00640000091496 #36	ENSGT00940000156597.b #37	ENSGT00940000163272.a.a
Squirrel	MODERN SPECIES	186			TNP1 (ENSSTOG00000024911)	IGFBP5 (ENSSTOG00000029182)	IGFBP2 (ENSSTOG00000011217)	RPL37A (ENSSTOG00000030968)	SMARCAL1 (ENSSTOG00000015621)	MARCHF4 (ENSSTOG00000033181)	XRCC5 (ENSSTOG00000006478)	TMEM169 (ENSSTOG00000006471)	PECR (ENSSTOG00000013870)	MREG (ENSSTOG00000009936)	FN1 (ENSSTOG00000002709) #19	ATIC (ENSSTOG00000002687) #20	ABCA12 (ENSSTOG00000022176) #21	BARD1 (ENSSTOG00000002413) #22	VWC2L (ENSSTOG00000011936) #23	ENSSTOG00000029346	ENSSTOG00000011925 #24	IKZF2 (ENSSTOG00000011683) #25	ERBB4 (ENSSTOG00000000187) #26	CPS1 (ENSSTOG00000000128) #28	LANCL1 (ENSSTOG00000022397) #29	MYL1 (ENSSTOG00000003469) #31
Arctic ground squirrel	MODERN SPECIES	265				RPL37A (ENSUPAG00010005317)	SMARCAL1 (ENSUPAG00010005292)	ENSUPAG00010005289	MARCHF4 (ENSUPAG00010005287)	XRCC5 (ENSUPAG00010005275)	TMEM169 (ENSUPAG00010005270)	PECR (ENSUPAG00010005257)	MREG (ENSUPAG00010005248)	FN1 (ENSUPAG00010004397) #19	ATIC (ENSUPAG00010004349) #20	ABCA12 (ENSUPAG00010004294) #21	ENSUPAG00010004290	BARD1 (ENSUPAG00010004260) #22	VWC2L (ENSUPAG00010004248) #23	ENSUPAG00010004229 #24
Alpin marmot	MODERN SPECIES	8	TNS1 (ENSMMMG00000018087)	TNP1 (ENSMMMG00000018045)	IGFBP5 (ENSMMMG00000018026)	IGFBP2 (ENSMMMG00000018011)	ENSMMMG00000017973	RPL37A (ENSMMMG00000017968)	SMARCAL1 (ENSMMMG00000017898)	MARCHF4 (ENSMMMG00000017890)	XRCC5 (ENSMMMG00000017867)	TMEM169 (ENSMMMG00000017863)	PECR (ENSMMMG00000017844)	MREG (ENSMMMG00000017833)	FN1 (ENSMMMG00000016529) #19	ATIC (ENSMMMG00000016514) #20	ABCA12 (ENSMMMG00000016481) #21	BARD1 (ENSMMMG00000016460) #22	VWC2L (ENSMMMG00000016430) #23	ENSMMMG00000016401 #24	IKZF2 (ENSMMMG00000016182) #25	ENSMMMG00000016161	ENSMMMG00000016149	ENSMMMG00000016133 #26	CPS1 (ENSMMMG00000016097) #28	LANCL1 (ENSMMMG00000016069) #29	MYL1 (ENSMMMG00000016062) #31	ACADL (ENSMMMG00000015744) #32	KANSL1L (ENSMMMG00000015671) #34	ENSMMMG00000015656 #35	UNC80 (ENSMMMG00000015490) #36	MAP2 (ENSMMMG00000015268) #37	ENSMMMG00000015249
Eurasian red squirrel	MODERN SPECIES	12	CXCR2 (ENSSVLG00005010719)	RUFY4 (ENSSVLG00005009621)	TNS1 (ENSSVLG00005009290)	TNP1 (ENSSVLG00005009189)	IGFBP5 (ENSSVLG00005009167)	IGFBP2 (ENSSVLG00005009134)	ENSSVLG00005008994	MARCHF4 (ENSSVLG00005008624)	XRCC5 (ENSSVLG00005008576)	TMEM169 (ENSSVLG00005008550)	PECR (ENSSVLG00005008529)	MREG (ENSSVLG00005008491)	FN1 (ENSSVLG00005008290) #19	ATIC (ENSSVLG00005008052) #20	ABCA12 (ENSSVLG00005007547) #21	BARD1 (ENSSVLG00005007225) #22	VWC2L (ENSSVLG00005007108) #23	SPAG16 (ENSSVLG00005007010) #24	ENSSVLG00005006962	IKZF2 (ENSSVLG00005006796) #25	ENSSVLG00005006732	ENSSVLG00005006704	ERBB4 (ENSSVLG00005006250) #26	CPS1 (ENSSVLG00005005630) #28	ENSSVLG00005005520 #29	MYL1 (ENSSVLG00005005436) #31	ENSSVLG00005005403	HNRNPA2B1 (ENSSVLG00005005387)	ACADL (ENSSVLG00005005352) #32	KANSL1L (ENSSVLG00005005286) #34	ENSSVLG00005005150 #35
Rodentia_B	ANCESTRAL SPECIES	12	ENSGT00940000155400.B	ENSGT00390000000539	ENSGT00940000155890	ENSGT00940000158542	ENSGT00390000016988.a.b	ENSGT00940000157608	ENSGT00940000158179	ENSGT00940000153239.A	ENSGT00390000015276	ENSGT00940000156882	ENSGT00390000008926	ENSGT00940000155126 #19	ENSGT00940000168433	ENSGT00390000004553 #20	ENSGT00940000157295 #21	ENSGT00940000156532 #22	ENSGT00720000108792.B #23	ENSGT00940000155053 #24	ENSGT00940000157137 #25	ENSGT00390000002231.d.b	ENSGT00940000154695 #26	ENSGT00940000157192 #28	ENSGT00530000063186.b.b #29	ENSGT01030000234570.d.a #31	ENSGT00940000157652 #32	ENSGT00530000063688.a #34	ENSGT00390000001447 #35	ENSGT00640000091496 #36	ENSGT00940000156597.b #37	ENSGT00940000159094	ENSGT00940000156307.b
Myomorpha	ANCESTRAL SPECIES	10	ENSGT00940000155400.B	ENSGT00390000000539	ENSGT00940000155890	ENSGT00940000158542	ENSGT00390000016988.a.b	ENSGT00940000157608	ENSGT00940000158179	ENSGT00940000153239.A	ENSGT00390000015276	ENSGT00940000156882	ENSGT00390000008926	ENSGT00940000155126 #19	ENSGT00940000168433	ENSGT00390000004553 #20	ENSGT00940000157295 #21	ENSGT00940000156532 #22	ENSGT00720000108792.B #23	ENSGT00940000155053 #24	ENSGT00940000157137 #25	ENSGT00390000002231.d.b	ENSGT00940000154695 #26	ENSGT00940000157192 #28	ENSGT00530000063186.b.b #29	ENSGT01030000234570.d.a #31	ENSGT00940000157652 #32	ENSGT00530000063688.a #34	ENSGT00390000001447 #35	ENSGT00640000091496 #36	ENSGT00940000156597.b #37	ENSGT00940000159094	ENSGT00940000156307.b
Muroidea	ANCESTRAL SPECIES	20	ENSGT00940000155400.B	ENSGT00390000000539	ENSGT00940000155890	ENSGT00940000158542	ENSGT00390000016988.a.b	ENSGT00940000157608	ENSGT00940000158179	ENSGT00940000153239.A	ENSGT00390000015276	ENSGT00940000156882	ENSGT00390000008926	ENSGT00940000155126 #19	ENSGT00940000168433	ENSGT00390000004553 #20	ENSGT00940000157295 #21	ENSGT00940000156532 #22	ENSGT00720000108792.B #23	ENSGT00940000155053 #24	ENSGT00940000157137 #25	ENSGT00390000002231.d.b	ENSGT00940000154695 #26	ENSGT00940000157192 #28	ENSGT00530000063186.b.b #29	ENSGT01030000234570.d.a #31	ENSGT00940000157652 #32	ENSGT00530000063688.a #34	ENSGT00390000001447 #35	ENSGT00640000091496 #36	ENSGT00940000156597.b #37	ENSGT00940000159094	ENSGT00940000156307.b
Muroidea_A	ANCESTRAL SPECIES	19	ENSGT00940000154044.a.b	ENSGT00940000155400.B	ENSGT00390000000539	ENSGT00940000155890	ENSGT00940000158542	ENSGT00390000016988.a.b	ENSGT00940000157608	ENSGT00940000158179	ENSGT00940000153239.A	ENSGT00390000015276	ENSGT00940000156882	ENSGT00390000008926	ENSGT00940000155126 #19	ENSGT00390000004553 #20	ENSGT00940000157295 #21	ENSGT00940000156532 #22	ENSGT00720000108792.B #23	ENSGT00940000155053 #24	ENSGT00940000157137 #25	ENSGT00390000002231.d.b	ENSGT00940000154695 #26	ENSGT00940000157192 #28	ENSGT00530000063186.b.b #29	ENSGT01030000234570.d.a #31	ENSGT00940000157652 #32	ENSGT00530000063688.a #34	ENSGT00390000001447 #35	ENSGT00640000091496 #36	ENSGT00940000156597.b #37	ENSGT00940000159094	ENSGT00940000156307.b
Cricetidae	ANCESTRAL SPECIES	19	ENSGT00940000154044.a.b	ENSGT00940000155400.B	ENSGT00390000000539	ENSGT00940000155890	ENSGT00940000158542	ENSGT00390000016988.a.b	ENSGT00940000157608	ENSGT00940000158179	ENSGT00940000153239.A	ENSGT00390000015276	ENSGT00940000156882	ENSGT00390000008926	ENSGT00940000155126 #19	ENSGT00390000004553 #20	ENSGT00940000157295 #21	ENSGT00940000156532 #22	ENSGT00720000108792.B #23	ENSGT00940000155053 #24	ENSGT00940000157137 #25	ENSGT00390000002231.d.b	ENSGT00940000154695 #26	ENSGT00940000157192 #28	ENSGT00530000063186.b.b #29	ENSGT01030000234570.d.a #31	ENSGT00940000157652 #32	ENSGT00530000063688.a #34	ENSGT00390000001447 #35	ENSGT00640000091496 #36	ENSGT00940000156597.b #37	ENSGT00940000159094	ENSGT00940000156307.b
Cricetinae	ANCESTRAL SPECIES	3	ENSGT00940000154044.a.b	ENSGT00940000155400.B	ENSGT00390000000539	ENSGT00940000155890	ENSGT00940000158542	ENSGT00390000016988.a.b	ENSGT00940000157608	ENSGT00940000158179	ENSGT00940000153239.A	ENSGT00390000015276	ENSGT00940000156882	ENSGT00390000008926	ENSGT00940000155126 #19	ENSGT00390000004553 #20	ENSGT00940000157295 #21	ENSGT00940000156532 #22	ENSGT00720000108792.B #23	ENSGT00940000155053 #24	ENSGT00940000157137 #25	ENSGT00940000154695 #26	ENSGT00940000157192 #28	ENSGT00530000063186.b.b #29	ENSGT01030000234570.d.a #31	ENSGT00940000157652 #32	ENSGT00530000063688.a #34	ENSGT00390000001447 #35	ENSGT00640000091496 #36	ENSGT00940000156597.b #37	ENSGT00940000159094	ENSGT00940000156307.b	ENSGT00390000012547.b
Chinese hamster chok1gshd	MODERN SPECIES	1	Rufy4 (ENSCGRG00001019715)	Tns1 (ENSCGRG00001019432)	Tnp1 (ENSCGRG00001024576)	Igfbp5 (ENSCGRG00001021151)	Igfbp2 (ENSCGRG00001020105)	Rpl37a (ENSCGRG00001018703)	Smarcal1 (ENSCGRG00001024685)	Marchf4 (ENSCGRG00001020474)	Xrcc5 (ENSCGRG00001022536)	Tmem169 (ENSCGRG00001022364)	Pecr (ENSCGRG00001020645)	Mreg (ENSCGRG00001019227)	Fn1 (ENSCGRG00001023892) #19	Atic (ENSCGRG00001019907) #20	Abca12 (ENSCGRG00001018994) #21	Bard1 (ENSCGRG00001019211) #22	Vwc2l (ENSCGRG00001022705) #23	ENSCGRG00001018870 #24	Ikzf2 (ENSCGRG00001020531) #25	Erbb4 (ENSCGRG00001023006) #26	Cps1 (ENSCGRG00001019583) #28	Lancl1 (ENSCGRG00001018654) #29	Myl1 (ENSCGRG00001018385) #31	Acadl (ENSCGRG00001020753) #32	Kansl1l (ENSCGRG00001021527) #34	Rpe (ENSCGRG00001018221) #35	Unc80 (ENSCGRG00001024763) #36	Map2 (ENSCGRG00001019179) #37	ENSCGRG00001017914	Pth2r (ENSCGRG00001020290)	Pikfyve (ENSCGRG00001019851)
Golden Hamster	MODERN SPECIES	640	Rufy4 (ENSMAUG00000011433)	ENSMAUG00000006666	Tns1 (ENSMAUG00000019800)	Tnp1 (ENSMAUG00000021536)	Igfbp5 (ENSMAUG00000001698)	Igfbp2 (ENSMAUG00000016997)	Rpl37a (ENSMAUG00000020042)	Smarcal1 (ENSMAUG00000021316)	Marchf4 (ENSMAUG00000014893)	Xrcc5 (ENSMAUG00000006680)	Tmem169 (ENSMAUG00000014332)	Pecr (ENSMAUG00000009535)	Fn1 (ENSMAUG00000001872) #19	Atic (ENSMAUG00000013188) #20	Abca12 (ENSMAUG00000011442) #21	Bard1 (ENSMAUG00000005663) #22	ENSMAUG00000009590	Vwc2l (ENSMAUG00000009036) #23	ENSMAUG00000010536 #24	Ikzf2 (ENSMAUG00000017775) #25	Erbb4 (ENSMAUG00000021336) #26	Cps1 (ENSMAUG00000010923) #28	Lancl1 (ENSMAUG00000013753) #29	Myl1 (ENSMAUG00000018186) #31	Acadl (ENSMAUG00000018703) #32	Kansl1l (ENSMAUG00000013611) #34	Rpe (ENSMAUG00000011547) #35	ENSMAUG00000009679	ENSMAUG00000019100 #36	Map2 (ENSMAUG00000012012) #37	ENSMAUG00000015143
Cricetidae_B	ANCESTRAL SPECIES	20	ENSGT00940000154044.a.b	ENSGT00940000155400.B	ENSGT00390000000539	ENSGT00940000155890	ENSGT00940000158542	ENSGT00390000016988.a.b	ENSGT00940000157608	ENSGT00940000158179	ENSGT00940000153239.A	ENSGT00390000015276	ENSGT00940000156882	ENSGT00390000008926	ENSGT00940000155126 #19	ENSGT00390000004553 #20	ENSGT00940000157295 #21	ENSGT00940000156532 #22	ENSGT00720000108792.B #23	ENSGT00940000155053 #24	ENSGT00940000157137 #25	ENSGT00390000002231.d.b	ENSGT00940000154695 #26	ENSGT00940000157192 #28	ENSGT00530000063186.b.b #29	ENSGT01030000234570.d.a #31	ENSGT00940000157652 #32	ENSGT00530000063688.a #34	ENSGT00390000001447 #35	ENSGT00640000091496 #36	ENSGT00940000156597.b #37	ENSGT00940000159094	ENSGT00940000156307.b
Prairie vole	MODERN SPECIES	354	Agxt (ENSMOCG00000002293)	Kif1a (ENSMOCG00000003062)	Aqp12 (ENSMOCG00000005420)	Capn10 (ENSMOCG00000016869)	Rnpepl1 (ENSMOCG00000001687)	Dusp28 (ENSMOCG00000020145)	Ankmy1 (ENSMOCG00000001016)	Gpc1 (ENSMOCG00000000952)	Otos (ENSMOCG00000009370)	ENSMOCG00000010518	ENSMOCG00000020221	Fn1 (ENSMOCG00000022262) #19	Atic (ENSMOCG00000015771) #20	ENSMOCG00000003338	Abca12 (ENSMOCG00000014923) #21	Bard1 (ENSMOCG00000017289) #22	Vwc2l (ENSMOCG00000007279) #23	Spag16 (ENSMOCG00000017743) #24	ENSMOCG00000000249	Ikzf2 (ENSMOCG00000011868) #25	Erbb4 (ENSMOCG00000016854) #26	Cps1 (ENSMOCG00000009767) #28	Lancl1 (ENSMOCG00000017471) #29	Myl1 (ENSMOCG00000021319) #31	Acadl (ENSMOCG00000022401) #32	Kansl1l (ENSMOCG00000020578) #34	Rpe (ENSMOCG00000013941) #35	Unc80 (ENSMOCG00000014746) #36	ENSMOCG00000006121	ENSMOCG00000017798 #37	ENSMOCG00000022246
Northern American deer mouse	MODERN SPECIES	4	Rufy4 (ENSPEMG00000022881)	Tns1 (ENSPEMG00000017420)	Tnp1 (ENSPEMG00000013633)	Igfbp5 (ENSPEMG00000024920)	Igfbp2 (ENSPEMG00000018165)	Rpl37a (ENSPEMG00000008580)	Smarcal1 (ENSPEMG00000013063)	Marchf4 (ENSPEMG00000005987)	Xrcc5 (ENSPEMG00000012102)	Tmem169 (ENSPEMG00000026340)	Pecr (ENSPEMG00000007409)	Mreg (ENSPEMG00000007185)	Fn1 (ENSPEMG00000018184) #19	Atic (ENSPEMG00000014807) #20	Abca12 (ENSPEMG00000016577) #21	Bard1 (ENSPEMG00000009105) #22	Vwc2l (ENSPEMG00000018139) #23	ENSPEMG00000018844 #24	Ikzf2 (ENSPEMG00000011886) #25	ENSPEMG00000024657	Erbb4 (ENSPEMG00000017090) #26	Cps1 (ENSPEMG00000010458) #28	Lancl1 (ENSPEMG00000020372) #29	Myl1 (ENSPEMG00000016490) #31	Acadl (ENSPEMG00000012977) #32	Kansl1l (ENSPEMG00000000580) #34	Rpe (ENSPEMG00000021162) #35	Unc80 (ENSPEMG00000020306) #36	Map2 (ENSPEMG00000020588) #37	ENSPEMG00000024512	ENSPEMG00000024519
Murinae	ANCESTRAL SPECIES	9	ENSGT00940000155400.B	ENSGT00390000000539	ENSGT00940000155890	ENSGT00940000158542	ENSGT00390000016988.a.b	ENSGT00940000157608	ENSGT00940000158179	ENSGT00940000153239.A	ENSGT00390000015276	ENSGT00940000156882	ENSGT00390000008926	ENSGT01050000247708	ENSGT00940000155126 #19	ENSGT00390000004553 #20	ENSGT00940000157295 #21	ENSGT00940000156532 #22	ENSGT00720000108792.B #23	ENSGT00940000155053 #24	ENSGT00940000157137 #25	ENSGT00390000002231.d.b	ENSGT00940000154695 #26	ENSGT00940000157192 #28	ENSGT00530000063186.b.b #29	ENSGT01030000234570.d.a #31	ENSGT00940000157652 #32	ENSGT00530000063688.a #34	ENSGT00390000001447 #35	ENSGT00640000091496 #36	ENSGT00940000156597.b #37	ENSGT00940000163272.a.a	ENSGT00940000159094
Mus	ANCESTRAL SPECIES	5	ENSGT00390000000539	ENSGT00940000155890	ENSGT00940000158542	ENSGT00390000016988.a.b	ENSGT00680000100065	ENSGT00940000157608	ENSGT00940000158179	ENSGT00940000153239.A	ENSGT00390000015276	ENSGT00940000156882	ENSGT00390000008926	ENSGT01050000247708	ENSGT00940000155126 #19	ENSGT00390000004553 #20	ENSGT00940000157295 #21	ENSGT00940000156532 #22	ENSGT00720000108792.B #23	ENSGT00940000155053 #24	ENSGT00940000157137 #25	ENSGT00390000002231.d.b	ENSGT00940000154695 #26	ENSGT00940000157192 #28	ENSGT00530000063186.b.b #29	ENSGT01030000234570.d.a #31	ENSGT00940000157652 #32	ENSGT00530000063688.a #34	ENSGT00390000001447 #35	ENSGT00640000091496 #36	ENSGT00940000156597.b #37	ENSGT00940000163272.a.a.i	ENSGT00940000159094
Mus_A	ANCESTRAL SPECIES	5	ENSGT00390000000539	ENSGT00940000155890	ENSGT00940000158542	ENSGT00390000016988.a.b	ENSGT00680000100065	ENSGT00940000157608	ENSGT00940000158179	ENSGT00940000153239.A	ENSGT00390000015276	ENSGT00940000156882	ENSGT00390000008926	ENSGT01050000247708	ENSGT00940000155126 #19	ENSGT00390000004553 #20	ENSGT00940000157295 #21	ENSGT00940000156532 #22	ENSGT00720000108792.B #23	ENSGT00940000155053 #24	ENSGT00940000157137 #25	ENSGT00390000002231.d.b	ENSGT00940000154695 #26	ENSGT00940000157192 #28	ENSGT00530000063186.b.b #29	ENSGT01030000234570.d.a #31	ENSGT00940000157652 #32	ENSGT00530000063688.a #34	ENSGT00390000001447 #35	ENSGT00640000091496 #36	ENSGT00940000156597.b #37	ENSGT00940000163272.a.a.i	ENSGT00940000159094
Mus_B	ANCESTRAL SPECIES	7	ENSGT00390000000539	ENSGT00940000155890	ENSGT00940000158542	ENSGT00390000016988.a.b	ENSGT00680000100065	ENSGT00940000157608	ENSGT00940000158179	ENSGT00940000153239.A	ENSGT00390000015276	ENSGT00940000156882	ENSGT00390000008926	ENSGT01050000247708	ENSGT00940000155126 #19	ENSGT00390000004553 #20	ENSGT00940000157295 #21	ENSGT00940000156532 #22	ENSGT00720000108792.B #23	ENSGT00940000155053 #24	ENSGT00940000157137 #25	ENSGT00390000002231.d.b	ENSGT00940000154695 #26	ENSGT00940000157192 #28	ENSGT00530000063186.b.b #29	ENSGT01030000234570.d.a #31	ENSGT00940000157652 #32	ENSGT00530000063688.a #34	ENSGT00390000001447 #35	ENSGT00640000091496 #36	ENSGT00940000156597.b #37	ENSGT00940000163272.a.a.i	ENSGT00940000159094
Mouse	MODERN SPECIES		Tns1 (ENSMUSG00000055322)	Tnp1 (ENSMUSG00000026182)	Igfbp5 (ENSMUSG00000026185)	Igfbp2 (ENSMUSG00000039323)	Rpl37a (ENSMUSG00000046330)	Ankar (ENSMUSG00000039342)	Smarcal1 (ENSMUSG00000039354)	Marchf4 (ENSMUSG00000039372)	Xrcc5 (ENSMUSG00000026187)	Tmem169 (ENSMUSG00000026188)	Pecr (ENSMUSG00000026189)	Mreg (ENSMUSG00000039395)	Fn1 (ENSMUSG00000026193) #19	Atic (ENSMUSG00000026192) #20	Abca12 (ENSMUSG00000050296) #21	Bard1 (ENSMUSG00000026196) #22	Vwc2l (ENSMUSG00000045648) #23	Spag16 (ENSMUSG00000053153) #24	Ikzf2 (ENSMUSG00000025997) #25	Erbb4 (ENSMUSG00000062209) #26	Cps1 (ENSMUSG00000025991) #28	Lancl1 (ENSMUSG00000026000) #29	Myl1 (ENSMUSG00000061816) #31	Acadl (ENSMUSG00000026003) #32	Kansl1l (ENSMUSG00000026004) #34	Rpe (ENSMUSG00000026005) #35	Unc80 (ENSMUSG00000055567) #36	Map2 (ENSMUSG00000015222) #37	Crygf (ENSMUSG00000025945)	Pth2r (ENSMUSG00000025946)	Pikfyve (ENSMUSG00000025949)
Mus_C	ANCESTRAL SPECIES	1	ENSGT00940000155400.B	ENSGT00390000000539	ENSGT00940000155890	ENSGT00940000158542	ENSGT00390000016988.a.b	ENSGT00940000157608	ENSGT00940000158179	ENSGT00940000153239.A	ENSGT00390000015276	ENSGT00940000156882	ENSGT00390000008926	ENSGT01050000247708	ENSGT00940000155126 #19	ENSGT00390000004553 #20	ENSGT00940000157295 #21	ENSGT00940000156532 #22	ENSGT00720000108792.B #23	ENSGT00940000155053 #24	ENSGT00940000157137 #25	ENSGT00390000002231.d.b	ENSGT00940000154695 #26	ENSGT00940000157192 #28	ENSGT00530000063186.b.b #29	ENSGT01030000234570.d.a #31	ENSGT00940000157652 #32	ENSGT00530000063688.a #34	ENSGT00390000001447 #35	ENSGT00640000091496 #36	ENSGT00940000156597.b #37	ENSGT00940000163272.a.a.i	ENSGT00940000159094
spretus	MODERN SPECIES		Rufy4 (MGP_SPRETEiJ_G0015058)	Tns1 (MGP_SPRETEiJ_G0015057)	Tnp1 (MGP_SPRETEiJ_G0015056)	Igfbp5 (MGP_SPRETEiJ_G0015055)	Igfbp2 (MGP_SPRETEiJ_G0015054)	Rpl37a (MGP_SPRETEiJ_G0015053)	Smarcal1 (MGP_SPRETEiJ_G0015052)	Marchf4 (MGP_SPRETEiJ_G0015051)	Xrcc5 (MGP_SPRETEiJ_G0015050)	Tmem169 (MGP_SPRETEiJ_G0015049)	Pecr (MGP_SPRETEiJ_G0015048)	Mreg (MGP_SPRETEiJ_G0015047)	Fn1 (MGP_SPRETEiJ_G0015046) #19	Atic (MGP_SPRETEiJ_G0015045) #20	Abca12 (MGP_SPRETEiJ_G0015044) #21	Bard1 (MGP_SPRETEiJ_G0015043) #22	Vwc2l (MGP_SPRETEiJ_G0015042) #23	Spag16 (MGP_SPRETEiJ_G0015041) #24	Ikzf2 (MGP_SPRETEiJ_G0015040) #25	Erbb4 (MGP_SPRETEiJ_G0015039) #26	Cps1 (MGP_SPRETEiJ_G0015038) #28	Lancl1 (MGP_SPRETEiJ_G0015037) #29	Myl1 (MGP_SPRETEiJ_G0015036) #31	Acadl (MGP_SPRETEiJ_G0015035) #32	Kansl1l (MGP_SPRETEiJ_G0015034) #34	Rpe (MGP_SPRETEiJ_G0015033) #35	Unc80 (MGP_SPRETEiJ_G0015032) #36	Map2 (MGP_SPRETEiJ_G0015031) #37	Crygf (MGP_SPRETEiJ_G0015030)	Pth2r (MGP_SPRETEiJ_G0015029)	Pikfyve (MGP_SPRETEiJ_G0015028)
Steppe mouse	MODERN SPECIES	2739															Abca12 (ENSMSIG00000032128) #21	Bard1 (ENSMSIG00000032127) #22	ENSMSIG00000032126	Vwc2l (ENSMSIG00000032125) #23
Ryukyu mouse	MODERN SPECIES		Tns1 (MGP_CAROLIEiJ_G0014251)	Tnp1 (MGP_CAROLIEiJ_G0014250)	Igfbp5 (MGP_CAROLIEiJ_G0014249)	Igfbp2 (MGP_CAROLIEiJ_G0014248)	Rpl37a (MGP_CAROLIEiJ_G0014247)	Ankar (MGP_CAROLIEiJ_G0014246)	Smarcal1 (MGP_CAROLIEiJ_G0014245)	Marchf4 (MGP_CAROLIEiJ_G0014244)	Xrcc5 (MGP_CAROLIEiJ_G0014243)	Tmem169 (MGP_CAROLIEiJ_G0014242)	Pecr (MGP_CAROLIEiJ_G0014241)	Mreg (MGP_CAROLIEiJ_G0014240)	Fn1 (MGP_CAROLIEiJ_G0014239) #19	Atic (MGP_CAROLIEiJ_G0014238) #20	Abca12 (MGP_CAROLIEiJ_G0014237) #21	Bard1 (MGP_CAROLIEiJ_G0014236) #22	Vwc2l (MGP_CAROLIEiJ_G0014235) #23	Spag16 (MGP_CAROLIEiJ_G0014234) #24	Ikzf2 (MGP_CAROLIEiJ_G0014233) #25	Erbb4 (MGP_CAROLIEiJ_G0014232) #26	Cps1 (MGP_CAROLIEiJ_G0014231) #28	Lancl1 (MGP_CAROLIEiJ_G0014230) #29	Myl1 (MGP_CAROLIEiJ_G0014229) #31	Acadl (MGP_CAROLIEiJ_G0014228) #32	Kansl1l (MGP_CAROLIEiJ_G0014227) #34	Rpe (MGP_CAROLIEiJ_G0014226) #35	Unc80 (MGP_CAROLIEiJ_G0014225) #36	Map2 (MGP_CAROLIEiJ_G0014224) #37	Crygf (MGP_CAROLIEiJ_G0014223)	Pth2r (MGP_CAROLIEiJ_G0014222)	Pikfyve (MGP_CAROLIEiJ_G0014221)
Shrew mouse	MODERN SPECIES	18	Tns1 (MGP_PahariEiJ_G0027489)	Tnp1 (MGP_PahariEiJ_G0027488)	Igfbp5 (MGP_PahariEiJ_G0027487)	Igfbp2 (MGP_PahariEiJ_G0027486)	Rpl37a (MGP_PahariEiJ_G0027485)	Ankar (MGP_PahariEiJ_G0027484)	Smarcal1 (MGP_PahariEiJ_G0027483)	Marchf4 (MGP_PahariEiJ_G0027482)	Xrcc5 (MGP_PahariEiJ_G0027481)	Tmem169 (MGP_PahariEiJ_G0027480)	Pecr (MGP_PahariEiJ_G0027479)	Mreg (MGP_PahariEiJ_G0027478)	Fn1 (MGP_PahariEiJ_G0027477) #19	Atic (MGP_PahariEiJ_G0027476) #20	Abca12 (MGP_PahariEiJ_G0027475) #21	Bard1 (MGP_PahariEiJ_G0027474) #22	Vwc2l (MGP_PahariEiJ_G0027473) #23	Spag16 (MGP_PahariEiJ_G0027472) #24	Ikzf2 (MGP_PahariEiJ_G0027471) #25	Erbb4 (MGP_PahariEiJ_G0027470) #26	Cps1 (MGP_PahariEiJ_G0027469) #28	Lancl1 (MGP_PahariEiJ_G0027468) #29	Myl1 (MGP_PahariEiJ_G0027467) #31	Acadl (MGP_PahariEiJ_G0027466) #32	Kansl1l (MGP_PahariEiJ_G0027465) #34	Rpe (MGP_PahariEiJ_G0027464) #35	Unc80 (MGP_PahariEiJ_G0027463) #36	Map2 (MGP_PahariEiJ_G0027462) #37	MGP_PahariEiJ_G0027461	MGP_PahariEiJ_G0027460	Pikfyve (MGP_PahariEiJ_G0027459)
Rat	MODERN SPECIES	19	Tnp1 (ENSRNOG00000017611)	Igfbp5 (ENSRNOG00000017206)	Igfbp2 (ENSRNOG00000016957)	ENSRNOG00000063418	Smarcal1 (ENSRNOG00000016503)	ENSRNOG00000063848	Marchf4 (ENSRNOG00000016472)	Xrcc5 (ENSRNOG00000016105)	Tmem169 (ENSRNOG00000016091)	Pecr (ENSRNOG00000055295)	Mreg (ENSRNOG00000015774)	AABR07068042.1 (ENSRNOG00000037894)	Fn1 (ENSRNOG00000014288) #19	Atic (ENSRNOG00000015511) #20	Abca12 (ENSRNOG00000015248) #21	Bard1 (ENSRNOG00000014960) #22	Vwc2l (ENSRNOG00000027400) #23	ENSRNOG00000069358	LOC102550841 (ENSRNOG00000054475) #24	Ikzf2 (ENSRNOG00000027430) #25	RGD1562431 (ENSRNOG00000032306)	Erbb4 (ENSRNOG00000014248) #26	Cps1 (ENSRNOG00000013704) #28	Lancl1 (ENSRNOG00000013557) #29	Myl1 (ENSRNOG00000013262) #31	Acadl (ENSRNOG00000012966) #32	Kansl1l (ENSRNOG00000028149) #34	Rpe (ENSRNOG00000038085) #35	Unc80 (ENSRNOG00000028362) #36	Map2 (ENSRNOG00000011841) #37	ENSRNOG00000068845
Upper Galilee mountains blind mole rat	MODERN SPECIES	1887	ENSNGAG00000020111	Igfbp5 (ENSNGAG00000015689)	Igfbp2 (ENSNGAG00000014418)	Rpl37a (ENSNGAG00000012401)	Smarcal1 (ENSNGAG00000016128)	Marchf4 (ENSNGAG00000007981)	Xrcc5 (ENSNGAG00000023190)	Tmem169 (ENSNGAG00000022271)	Pecr (ENSNGAG00000003949)	Mreg (ENSNGAG00000002348)	ENSNGAG00000011565 #19	ENSNGAG00000024366	Atic (ENSNGAG00000018746) #20	Abca12 (ENSNGAG00000022702) #21	ENSNGAG00000013362	Bard1 (ENSNGAG00000023844) #22	Vwc2l (ENSNGAG00000010373) #23
Lesser Egyptian jerboa	MODERN SPECIES	52							Tmem169 (ENSJJAG00000011204)	Pecr (ENSJJAG00000012989)	Mreg (ENSJJAG00000000628)	ENSJJAG00000022139	ENSJJAG00000013500	ENSJJAG00000016483	Fn1 (ENSJJAG00000021114) #19	Atic (ENSJJAG00000020485) #20	Abca12 (ENSJJAG00000014262) #21	ENSJJAG00000015311 #22	Vwc2l (ENSJJAG00000020624) #23	Spag16 (ENSJJAG00000000768) #24	Ikzf2 (ENSJJAG00000015254) #25	Erbb4 (ENSJJAG00000021464) #26	ENSJJAG00000013028	ENSJJAG00000008457	Cps1 (ENSJJAG00000023728) #28	Lancl1 (ENSJJAG00000005677) #29	Myl1 (ENSJJAG00000000461) #31	Acadl (ENSJJAG00000021820) #32	Kansl1l (ENSJJAG00000020367) #34	ENSJJAG00000012686 #35	Unc80 (ENSJJAG00000015201) #36	Map2 (ENSJJAG00000014034) #37	Pth2r (ENSJJAG00000009843)
Kangaroo rat	MODERN SPECIES	320	Tns1 (ENSDORG00000013017)	ENSDORG00000000281	Igfbp5 (ENSDORG00000008699)	Igfbp2 (ENSDORG00000008698)	Rpl37a (ENSDORG00000027793)	Smarcal1 (ENSDORG00000013944)	Marchf4 (ENSDORG00000002802)	Xrcc5 (ENSDORG00000011417)	Tmem169 (ENSDORG00000011415)	Pecr (ENSDORG00000015456)	Mreg (ENSDORG00000008365)	ENSDORG00000023313 #19	ENSDORG00000028093	Atic (ENSDORG00000010127) #20	Abca12 (ENSDORG00000005459) #21	ENSDORG00000015439 #22	Vwc2l (ENSDORG00000010438) #23	ENSDORG00000025882 #24	Ikzf2 (ENSDORG00000007539) #25	ENSDORG00000028919	ENSDORG00000023387	Erbb4 (ENSDORG00000013025) #26	Cps1 (ENSDORG00000007835) #28	Lancl1 (ENSDORG00000009233) #29	Myl1 (ENSDORG00000027836) #31	ENSDORG00000024057	Acadl (ENSDORG00000005849) #32	Kansl1l (ENSDORG00000005847) #34	Rpe (ENSDORG00000005846) #35	Unc80 (ENSDORG00000005840) #36	Map2 (ENSDORG00000005837) #37
Laurasiatheria	ANCESTRAL SPECIES	12	ENSGT00940000154044.a.b	ENSGT00940000155400.B	ENSGT00390000000539	ENSGT00940000155890	ENSGT00940000158542	ENSGT00390000016988.a.b	ENSGT00940000157608	ENSGT00940000158179	ENSGT00940000153239.A	ENSGT00390000015276	ENSGT00940000156882	ENSGT00390000008926	ENSGT00940000155126 #19	ENSGT00390000004553 #20	ENSGT00940000157295 #21	ENSGT00940000156532 #22	ENSGT00720000108792.B #23	ENSGT00940000155053 #24	ENSGT00940000157137 #25	ENSGT00390000002231.d.b	ENSGT00940000154695 #26	ENSGT00940000157192 #28	ENSGT00530000063186.b.b #29	ENSGT01030000234570.d.a #31	ENSGT00940000157652 #32	ENSGT00530000063688.a #34	ENSGT00390000001447 #35	ENSGT01030000235330	ENSGT00640000091496 #36	ENSGT00940000156597.b #37	ENSGT00940000159094
Laurasiatheria_a	ANCESTRAL SPECIES	16	ENSGT00940000154044.a.b	ENSGT00940000155400.B	ENSGT00390000000539	ENSGT00940000155890	ENSGT00940000158542	ENSGT00390000016988.a.b	ENSGT00940000157608	ENSGT00940000158179	ENSGT00940000153239.A	ENSGT00390000015276	ENSGT00940000156882	ENSGT00390000008926	ENSGT00940000155126 #19	ENSGT00390000004553 #20	ENSGT00940000157295 #21	ENSGT00940000156532 #22	ENSGT00720000108792.B #23	ENSGT00940000155053 #24	ENSGT00940000157137 #25	ENSGT00390000002231.d.b	ENSGT00940000154695 #26	ENSGT00940000157192 #28	ENSGT00530000063186.b.b #29	ENSGT01030000234570.d.a #31	ENSGT00940000157652 #32	ENSGT00530000063688.a #34	ENSGT00390000001447 #35	ENSGT01030000235330	ENSGT00640000091496 #36	ENSGT00940000156597.b #37	ENSGT00940000159094
Artiodactyla	ANCESTRAL SPECIES	13	ENSGT00940000154044.a.b	ENSGT00940000155400.B	ENSGT00390000000539	ENSGT00940000155890	ENSGT00940000158542	ENSGT00390000016988.a.b	ENSGT00940000157608	ENSGT00940000158179	ENSGT00940000153239.A	ENSGT00390000015276	ENSGT00940000156882	ENSGT00390000008926	ENSGT00940000155126 #19	ENSGT00390000004553 #20	ENSGT00940000157295 #21	ENSGT00940000156532 #22	ENSGT00720000108792.B #23	ENSGT00940000155053 #24	ENSGT00940000157137 #25	ENSGT00390000002231.d.b	ENSGT00940000154695 #26	ENSGT00940000157192 #28	ENSGT00530000063186.b.b #29	ENSGT01030000234570.d.a #31	ENSGT00940000157652 #32	ENSGT00530000063688.a #34	ENSGT00390000001447 #35	ENSGT01030000235330	ENSGT00640000091496 #36	ENSGT00940000156597.b #37	ENSGT00940000159094
Suina	ANCESTRAL SPECIES	3	ENSGT00940000154044.a.b	ENSGT00940000155400.B	ENSGT00390000000539	ENSGT00940000155890	ENSGT00940000158542	ENSGT00390000016988.a.b	ENSGT00940000157608	ENSGT00940000158179	ENSGT00940000153239.A	ENSGT00390000015276	ENSGT00940000156882	ENSGT00390000008926	ENSGT00940000155126 #19	ENSGT00390000004553 #20	ENSGT00940000157295 #21	ENSGT00940000156532 #22	ENSGT00720000108792.B #23	ENSGT00940000155053 #24	ENSGT00940000157137 #25	ENSGT00390000002231.d.b	ENSGT00940000154695 #26	ENSGT00940000157192 #28	ENSGT00530000063186.b.b #29	ENSGT01030000234570.d.a #31	ENSGT00940000157652 #32	ENSGT00530000063688.a #34	ENSGT00390000001447 #35	ENSGT00640000091496 #36	ENSGT00940000156597.b #37	ENSGT00940000158720.c.b	ENSGT00940000159094
Chacoan peccary	MODERN SPECIES	940	RUFY4 (ENSCWAG00000005010)	TNS1 (ENSCWAG00000005123)	TNP1 (ENSCWAG00000006457)	IGFBP5 (ENSCWAG00000006483)	IGFBP2 (ENSCWAG00000006499)	RPL37A (ENSCWAG00000006536)	SMARCAL1 (ENSCWAG00000006586)	MARCHF4 (ENSCWAG00000006660)	XRCC5 (ENSCWAG00000006688)	TMEM169 (ENSCWAG00000006756)	PECR (ENSCWAG00000006784)	MREG (ENSCWAG00000006855)	FN1 (ENSCWAG00000006968) #19	ATIC (ENSCWAG00000007355) #20	ABCA12 (ENSCWAG00000007483) #21	BARD1 (ENSCWAG00000008027) #22	VWC2L (ENSCWAG00000010304) #23	SPAG16 (ENSCWAG00000010324) #24	IKZF2 (ENSCWAG00000010504) #25	ENSCWAG00000010926	ERBB4 (ENSCWAG00000010989) #26	ENSCWAG00000011700	ENSCWAG00000011727	ENSCWAG00000011755	CPS1 (ENSCWAG00000011796) #28	LANCL1 (ENSCWAG00000012920) #29	MYL1 (ENSCWAG00000012965) #31	ACADL (ENSCWAG00000013051) #32	KANSL1L (ENSCWAG00000013105) #34	ENSCWAG00000013228 #35	UNC80 (ENSCWAG00000013389) #36
Pig	MODERN SPECIES	6	RUFY4 (ENSSSCG00000016182)	TNS1 (ENSSSCG00000027669)	TNP1 (ENSSSCG00000016179)	IGFBP5 (ENSSSCG00000025924)	IGFBP2 (ENSSSCG00000035392)	RPL37A (ENSSSCG00000036716)	SMARCAL1 (ENSSSCG00000035501)	MARCHF4 (ENSSSCG00000016176)	XRCC5 (ENSSSCG00000016177)	TMEM169 (ENSSSCG00000057002)	PECR (ENSSSCG00000022758)	MREG (ENSSSCG00000016175)	FN1 (ENSSSCG00000016174) #19	ATIC (ENSSSCG00000016173) #20	ABCA12 (ENSSSCG00000034282) #21	BARD1 (ENSSSCG00000016170) #22	ENSSSCG00000048197	VWC2L (ENSSSCG00000016168) #23	ENSSSCG00000049911	SPAG16 (ENSSSCG00000016166) #24	IKZF2 (ENSSSCG00000016164) #25	ENSSSCG00000037703	ERBB4 (ENSSSCG00000016160) #26	CPS1 (ENSSSCG00000016159) #28	LANCL1 (ENSSSCG00000016158) #29	MYL1 (ENSSSCG00000016157) #31	ACADL (ENSSSCG00000016156) #32	ENSSSCG00000060126	KANSL1L (ENSSSCG00000022830) #34	ENSSSCG00000032311 #35	UNC80 (ENSSSCG00000016153) #36
Artiodactyla_a	ANCESTRAL SPECIES	13	ENSGT00940000154044.a.b	ENSGT00940000155400.B	ENSGT00390000000539	ENSGT00940000155890	ENSGT00940000158542	ENSGT00390000016988.a.b	ENSGT00940000157608	ENSGT00940000158179	ENSGT00940000153239.A	ENSGT00390000015276	ENSGT00940000156882	ENSGT00390000008926	ENSGT00940000155126 #19	ENSGT00390000004553 #20	ENSGT00940000157295 #21	ENSGT00940000156532 #22	ENSGT00720000108792.B #23	ENSGT00940000155053 #24	ENSGT00940000157137 #25	ENSGT00390000002231.d.b	ENSGT00940000154695 #26	ENSGT00940000157192 #28	ENSGT00530000063186.b.b #29	ENSGT01030000234570.d.a #31	ENSGT00940000157652 #32	ENSGT00530000063688.a #34	ENSGT00390000001447 #35	ENSGT01030000235330	ENSGT00640000091496 #36	ENSGT00940000156597.b #37	ENSGT00940000159094
Artiodactyla_b	ANCESTRAL SPECIES	12	ENSGT00940000154044.a.b	ENSGT00940000155400.B	ENSGT00390000000539	ENSGT00940000155890	ENSGT00940000158542	ENSGT00390000016988.a.b	ENSGT00940000157608	ENSGT00940000158179	ENSGT00940000153239.A	ENSGT00390000015276	ENSGT00940000156882	ENSGT00390000008926	ENSGT00940000155126 #19	ENSGT00390000004553 #20	ENSGT00940000157295 #21	ENSGT00940000156532 #22	ENSGT00720000108792.B #23	ENSGT00940000155053 #24	ENSGT00940000157137 #25	ENSGT00390000002231.d.b	ENSGT00940000154695 #26	ENSGT00940000157192 #28	ENSGT00530000063186.b.b #29	ENSGT01030000234570.d.a #31	ENSGT00940000157652 #32	ENSGT00530000063688.a #34	ENSGT00390000001447 #35	ENSGT01030000235330.d	ENSGT00640000091496 #36	ENSGT00940000156597.b #37	ENSGT00940000159094
Cetacea	ANCESTRAL SPECIES	14	ENSGT00940000154044.a.b	ENSGT00940000155400.B	ENSGT00390000000539	ENSGT00940000155890	ENSGT00940000158542	ENSGT00390000016988.a.b	ENSGT00940000157608	ENSGT00940000158179	ENSGT00940000153239.A	ENSGT00390000015276	ENSGT00940000156882	ENSGT00390000008926	ENSGT00940000155126 #19	ENSGT00390000004553 #20	ENSGT00940000157295 #21	ENSGT00940000156532 #22	ENSGT00720000108792.B #23	ENSGT00940000155053 #24	ENSGT00940000157137 #25	ENSGT00390000002231.d.b	ENSGT00940000154695 #26	ENSGT00530000065303.j	ENSGT00940000157192 #28	ENSGT00530000063186.b.b #29	ENSGT01030000234570.d.a #31	ENSGT00940000157652 #32	ENSGT00530000063688.a #34	ENSGT00390000001447 #35	ENSGT01030000235330.d	ENSGT00640000091496 #36	ENSGT00940000156597.b #37
Odontoceti	ANCESTRAL SPECIES	13	ENSGT00940000154044.a.b	ENSGT00940000155400.B	ENSGT00390000000539	ENSGT00940000155890	ENSGT00940000158542	ENSGT00390000016988.a.b	ENSGT00940000157608	ENSGT00940000158179	ENSGT00940000153239.A	ENSGT00390000015276	ENSGT00940000156882	ENSGT00390000008926	ENSGT00940000155126 #19	ENSGT00390000004553 #20	ENSGT00940000157295 #21	ENSGT00940000156532 #22	ENSGT00720000108792.B #23	ENSGT00940000155053 #24	ENSGT00940000157137 #25	ENSGT00390000002231.d.b	ENSGT00940000154695 #26	ENSGT00530000065303.j	ENSGT00940000157192 #28	ENSGT00530000063186.b.b #29	ENSGT01030000234570.d.a #31	ENSGT00940000157652 #32	ENSGT00530000063688.a #34	ENSGT00390000001447 #35	ENSGT01030000235330.d	ENSGT00640000091496 #36	ENSGT00940000156597.b #37
Odontoceti_a	ANCESTRAL SPECIES	10	ENSGT01050000244848.A.a.h.i	ENSGT00940000154044.a.b	ENSGT00940000155400.B	ENSGT00390000000539	ENSGT00940000155890	ENSGT00940000158542	ENSGT00390000016988.a.b	ENSGT00940000157608	ENSGT00940000158179	ENSGT00940000153239.A	ENSGT00390000015276	ENSGT00390000008926	ENSGT00940000155126 #19	ENSGT00390000004553 #20	ENSGT00940000157295 #21	ENSGT00940000156532 #22	ENSGT00720000108792.B #23	ENSGT00940000155053 #24	ENSGT00940000157137 #25	ENSGT00390000002231.d.b	ENSGT00940000154695 #26	ENSGT00530000065303.j	ENSGT00940000157192 #28	ENSGT00530000063186.b.b #29	ENSGT01030000234570.d.a #31	ENSGT00940000157652 #32	ENSGT00530000063688.a #34	ENSGT00390000001447 #35	ENSGT01030000235330.d	ENSGT00640000091496 #36	ENSGT00940000156597.b #37
Odontoceti_b	ANCESTRAL SPECIES	12	ENSGT01050000244848.A.a.h.i	ENSGT00940000154044.a.b	ENSGT00940000155400.B	ENSGT00390000000539	ENSGT00940000155890	ENSGT00940000158542	ENSGT00390000016988.a.b	ENSGT00940000157608	ENSGT00940000158179	ENSGT00940000153239.A	ENSGT00390000015276	ENSGT00390000008926	ENSGT00940000155126 #19	ENSGT00390000004553 #20	ENSGT00940000157295 #21	ENSGT00940000156532 #22	ENSGT00720000108792.B #23	ENSGT00940000155053 #24	ENSGT00940000157137 #25	ENSGT00390000002231.d.b	ENSGT00940000154695 #26	ENSGT00530000065303.j	ENSGT00940000157192 #28	ENSGT00530000063186.b.b #29	ENSGT01030000234570.d.a #31	ENSGT00940000157652 #32	ENSGT00530000063688.a #34	ENSGT00390000001447.qb #35	ENSGT01030000235330.d	ENSGT00640000091496 #36	ENSGT00940000156597.b #37
Monodontidae	ANCESTRAL SPECIES	10	ENSGT01050000244848.A.a.h.i	ENSGT00940000154044.a.b	ENSGT00940000155400.B	ENSGT00390000000539	ENSGT00940000155890	ENSGT00940000158542	ENSGT00390000016988.a.b	ENSGT00940000157608	ENSGT00940000158179	ENSGT00940000153239.A	ENSGT00390000015276	ENSGT00390000008926	ENSGT00940000155126 #19	ENSGT00390000004553 #20	ENSGT00940000157295 #21	ENSGT00940000156532 #22	ENSGT00720000108792.B #23	ENSGT00940000155053 #24	ENSGT00940000157137 #25	ENSGT00940000154695 #26	ENSGT00530000065303.j	ENSGT00940000157192 #28	ENSGT00530000063186.b.b #29	ENSGT01030000234570.d.a #31	ENSGT00940000157652 #32	ENSGT00530000063688.a #34	ENSGT00390000001447.qb #35	ENSGT01030000235330.d	ENSGT00640000091496 #36	ENSGT00940000156597.b #37	ENSGT00940000158720.c.b.x
Narwhal	MODERN SPECIES	302	ENSMMNG00015006453	RUFY4 (ENSMMNG00015006488)	TNS1 (ENSMMNG00015006588)	TNP1 (ENSMMNG00015006732)	IGFBP5 (ENSMMNG00015006747)	IGFBP2 (ENSMMNG00015006761)	RPL37A (ENSMMNG00015006797)	SMARCAL1 (ENSMMNG00015006849)	MARCHF4 (ENSMMNG00015006890)	XRCC5 (ENSMMNG00015006904)	TMEM169 (ENSMMNG00015006931)	MREG (ENSMMNG00015006946)	FN1 (ENSMMNG00015007016) #19	ATIC (ENSMMNG00015007140) #20	ABCA12 (ENSMMNG00015007237) #21	BARD1 (ENSMMNG00015007443) #22	VWC2L (ENSMMNG00015007616) #23	SPAG16 (ENSMMNG00015007641) #24	IKZF2 (ENSMMNG00015007711) #25	ERBB4 (ENSMMNG00015007770) #26	ENSMMNG00015007841	CPS1 (ENSMMNG00015007884) #28	LANCL1 (ENSMMNG00015008039) #29	MYL1 (ENSMMNG00015008068) #31	ENSMMNG00015008099	ACADL (ENSMMNG00015008110) #32	KANSL1L (ENSMMNG00015008134) #34	ENSMMNG00015008179 #35	UNC80 (ENSMMNG00015008270) #36	MAP2 (ENSMMNG00015008438) #37	ENSMMNG00015008487
Beluga whale	MODERN SPECIES	84	CXCR2 (ENSDLEG00000011899)	RUFY4 (ENSDLEG00000011866)	TNS1 (ENSDLEG00000011725)	TNP1 (ENSDLEG00000011700)	IGFBP5 (ENSDLEG00000011691)	IGFBP2 (ENSDLEG00000011681)	RPL37A (ENSDLEG00000011670)	SMARCAL1 (ENSDLEG00000011642)	MARCHF4 (ENSDLEG00000011629)	XRCC5 (ENSDLEG00000011573)	TMEM169 (ENSDLEG00000011562)	MREG (ENSDLEG00000011537)	FN1 (ENSDLEG00000011437) #19	ATIC (ENSDLEG00000011357) #20	ABCA12 (ENSDLEG00000011292) #21	BARD1 (ENSDLEG00000011262) #22	VWC2L (ENSDLEG00000011244) #23	IKZF2 (ENSDLEG00000011195) #25	ERBB4 (ENSDLEG00000011065) #26	ENSDLEG00000011044	CPS1 (ENSDLEG00000010899) #28	LANCL1 (ENSDLEG00000010841) #29	ENSDLEG00000010817 #31	ACADL (ENSDLEG00000010802) #32	KANSL1L (ENSDLEG00000010779) #34	ENSDLEG00000010744 #35	ENSDLEG00000010732	UNC80 (ENSDLEG00000010609) #36	MAP2 (ENSDLEG00000010499) #37	ENSDLEG00000010475	PTH2R (ENSDLEG00000010408)
Vaquita	MODERN SPECIES	18	ENSPSNG00000014184	RUFY4 (ENSPSNG00000014217)	TNS1 (ENSPSNG00000014473)	TNP1 (ENSPSNG00000015249)	IGFBP5 (ENSPSNG00000015299)	IGFBP2 (ENSPSNG00000015351)	RPL37A (ENSPSNG00000015410)	SMARCAL1 (ENSPSNG00000015537)	MARCHF4 (ENSPSNG00000015751)	XRCC5 (ENSPSNG00000015841)	TMEM169 (ENSPSNG00000015908)	MREG (ENSPSNG00000015961)	FN1 (ENSPSNG00000016255) #19	ATIC (ENSPSNG00000016623) #20	ABCA12 (ENSPSNG00000016762) #21	BARD1 (ENSPSNG00000017308) #22	VWC2L (ENSPSNG00000017630) #23	ENSPSNG00000017666	SPAG16 (ENSPSNG00000017700) #24	IKZF2 (ENSPSNG00000017845) #25	ENSPSNG00000017988	ERBB4 (ENSPSNG00000018144) #26	ENSPSNG00000018762	CPS1 (ENSPSNG00000018881) #28	LANCL1 (ENSPSNG00000019514) #29	MYL1 (ENSPSNG00000019567) #31	ACADL (ENSPSNG00000019649) #32	KANSL1L (ENSPSNG00000019694) #34	ENSPSNG00000019741 #35	UNC80 (ENSPSNG00000020123) #36	MAP2 (ENSPSNG00000021466) #37
Dolphin	MODERN SPECIES	810																BARD1 (ENSTTRG00000007661) #22	VWC2L (ENSTTRG00000007658) #23	SPAG16 (ENSTTRG00000007630) #24
Sperm whale	MODERN SPECIES	11	VIL1 (ENSPCTG00005017833)	PNKD (ENSPCTG00005017792)	ENSPCTG00005017764	ENSPCTG00005017711	ENSPCTG00005017699	TNP1 (ENSPCTG00005017658)	RPL37A (ENSPCTG00005017558)	MARCH4 (ENSPCTG00005017507)	XRCC5 (ENSPCTG00005017451)	TMEM169 (ENSPCTG00005017414)	PECR (ENSPCTG00005017315)	MREG (ENSPCTG00005017221)	FN1 (ENSPCTG00005010889) #19	ATIC (ENSPCTG00005010239) #20	ABCA12 (ENSPCTG00005009725) #21	BARD1 (ENSPCTG00005009198) #22	VWC2L (ENSPCTG00005009115) #23	SPAG16 (ENSPCTG00005009033) #24	IKZF2 (ENSPCTG00005008691) #25	ENSPCTG00005008634	ERBB4 (ENSPCTG00005008147) #26	ENSPCTG00005008116	CPS1 (ENSPCTG00005007806) #28	LANCL1 (ENSPCTG00005007711) #29	ENSPCTG00005007695 #31	ENSPCTG00005007683 #31	MYL1 (ENSPCTG00005007638) #31	ACADL (ENSPCTG00005007603) #32	KANSL1L (ENSPCTG00005007546) #34	RPE (ENSPCTG00005007416) #35	UNC80 (ENSPCTG00005006733) #36
Blue whale	MODERN SPECIES	18	RUFY4 (ENSBMSG00010004294)	TNS1 (ENSBMSG00010004143)	TNP1 (ENSBMSG00010004074)	IGFBP5 (ENSBMSG00010004065)	IGFBP2 (ENSBMSG00010004055)	RPL37A (ENSBMSG00010004043)	ENSBMSG00010004033	SMARCAL1 (ENSBMSG00010004020)	MARCHF4 (ENSBMSG00010004007)	XRCC5 (ENSBMSG00010003999)	TMEM169 (ENSBMSG00010003988)	MREG (ENSBMSG00010003983)	FN1 (ENSBMSG00010003854) #19	ATIC (ENSBMSG00010003763) #20	ABCA12 (ENSBMSG00010003607) #21	BARD1 (ENSBMSG00010003318) #22	VWC2L (ENSBMSG00010003263) #23	ENSBMSG00010003250	ENSBMSG00010003241	SPAG16 (ENSBMSG00010003224) #24	IKZF2 (ENSBMSG00010003187) #25	ENSBMSG00010003157	ERBB4 (ENSBMSG00010003029) #26	ENSBMSG00010002996	CPS1 (ENSBMSG00010002893) #28	LANCL1 (ENSBMSG00010002864) #29	MYL1 (ENSBMSG00010002843) #31	ENSBMSG00010002831	ACADL (ENSBMSG00010002817) #32	KANSL1L (ENSBMSG00010002800) #34	ENSBMSG00010002786 #35
Pecora	ANCESTRAL SPECIES	16	ENSGT00940000154044.a.b	ENSGT00940000155400.B	ENSGT00390000000539	ENSGT00940000155890	ENSGT00940000158542	ENSGT00390000016988.a.b	ENSGT00940000157608	ENSGT00940000158179	ENSGT00940000153239.A	ENSGT00390000015276	ENSGT00940000156882	ENSGT00390000008926	ENSGT00940000155126 #19	ENSGT00390000004553 #20	ENSGT00940000157295 #21	ENSGT00940000156532 #22	ENSGT00720000108792.B #23	ENSGT00940000155053 #24	ENSGT00940000157137 #25	ENSGT00940000154695 #26	ENSGT00940000157192 #28	ENSGT00530000063186.b.b #29	ENSGT01030000234570.d.a #31	ENSGT00940000157652 #32	ENSGT00530000063688.a #34	ENSGT00390000001447 #35	ENSGT00640000091496 #36	ENSGT00940000156597.b #37	ENSGT00940000158720.c.b.t	ENSGT00940000159094	ENSGT00940000156307.b
Yarkand deer	MODERN SPECIES	31	ENSCHYG00000002849	TNP1 (ENSCHYG00000002856)	IGFBP5 (ENSCHYG00000002877)	IGFBP2 (ENSCHYG00000002895)	RPL37A (ENSCHYG00000002919)	SMARCAL1 (ENSCHYG00000002948)	MARCHF4 (ENSCHYG00000003004)	XRCC5 (ENSCHYG00000003017)	TMEM169 (ENSCHYG00000003059)	PECR (ENSCHYG00000003070)	MREG (ENSCHYG00000003092)	FN1 (ENSCHYG00000003158) #19	ATIC (ENSCHYG00000003528) #20	ENSCHYG00000003569	ABCA12 (ENSCHYG00000003601) #21	ENSCHYG00000003753 #22	VWC2L (ENSCHYG00000003794) #23	SPAG16 (ENSCHYG00000003817) #24	ENSCHYG00000003836	IKZF2 (ENSCHYG00000003879) #25	ERBB4 (ENSCHYG00000003952) #26	ENSCHYG00000004056	ENSCHYG00000004063	ENSCHYG00000004069	CPS1 (ENSCHYG00000004084) #28	LANCL1 (ENSCHYG00000004128) #29	ENSCHYG00000004138	MYL1 (ENSCHYG00000004152) #31	ACADL (ENSCHYG00000004178) #32	ENSCHYG00000004220	KANSL1L (ENSCHYG00000004240) #34
Percora_a	ANCESTRAL SPECIES	5	ENSGT00940000154044.a.b	ENSGT00940000155400.B	ENSGT00390000000539	ENSGT00940000155890	ENSGT00940000158542	ENSGT00390000016988.a.b	ENSGT00940000157608	ENSGT00940000158179	ENSGT00940000153239.A	ENSGT00390000015276	ENSGT00940000156882	ENSGT00390000008926	ENSGT00940000155126 #19	ENSGT00390000004553 #20	ENSGT00940000157295 #21	ENSGT00940000156532 #22	ENSGT00720000108792.B #23	ENSGT00940000155053 #24	ENSGT00940000157137 #25	ENSGT00940000154695 #26	ENSGT00940000157192 #28	ENSGT00530000063186.b.b #29	ENSGT01030000234570.d.a #31	ENSGT00940000157652 #32	ENSGT00530000063688.a #34	ENSGT00390000001447 #35	ENSGT00640000091496 #36	ENSGT00940000156597.b #37	ENSGT00940000158720.c.b.t	ENSGT00940000159094	ENSGT00940000156307.b
Bovidae	DUPLICATION
Bovidae	ANCESTRAL SPECIES	8	ENSGT00940000154044.a.b	ENSGT00940000155400.B	ENSGT00390000000539	ENSGT00940000155890	ENSGT00940000158542	ENSGT00390000016988.a.b	ENSGT00940000157608	ENSGT00940000158179	ENSGT00940000153239.A	ENSGT00390000015276	ENSGT00940000156882	ENSGT00390000008926	ENSGT00940000155126 #19	ENSGT00390000004553 #20	ENSGT00940000157295 #21	ENSGT00940000156532.k #22	ENSGT00720000108792.B #23	ENSGT00940000155053 #24	ENSGT00940000157137 #25	ENSGT00940000154695 #26	ENSGT00940000157192 #28	ENSGT00530000063186.b.b #29	ENSGT01030000234570.d.a #31	ENSGT00940000157652 #32	ENSGT00530000063688.a #34	ENSGT00390000001447 #35	ENSGT00640000091496 #36	ENSGT00940000156597.b #37	ENSGT00940000158720.c.b.t	ENSGT00940000159094	ENSGT00940000156307.b
Caprinae	DUPLICATION
Caprinae	ANCESTRAL SPECIES	5	ENSGT00940000154044.a.b	ENSGT00940000155400.B	ENSGT00390000000539	ENSGT00940000155890	ENSGT00940000158542	ENSGT00940000167978	ENSGT00940000157608	ENSGT00940000158179	ENSGT00940000153239.A	ENSGT00390000015276	ENSGT00940000156882	ENSGT00390000008926	ENSGT00940000155126 #19	ENSGT00390000004553 #20	ENSGT00940000157295 #21	ENSGT00940000156532.k.a #22	ENSGT00720000108792.B #23	ENSGT00940000155053 #24	ENSGT00940000157137 #25	ENSGT00940000154695 #26	ENSGT01010000228811	ENSGT00940000157192 #28	ENSGT00530000063186.b.b #29	ENSGT01030000234570.d.a #31	ENSGT00940000157652 #32	ENSGT00530000063688.a #34	ENSGT00390000001447.lb.a #35	ENSGT00640000091496 #36	ENSGT00940000156597.b #37	ENSGT00940000158720.c.b.t	ENSGT00940000159094
Goat	MODERN SPECIES	11	ENSCHIG00000024380	TNS1 (ENSCHIG00000014628)	TNP1 (ENSCHIG00000024932)	IGFBP5 (ENSCHIG00000011607)	IGFBP2 (ENSCHIG00000025360)	ENSCHIG00000009863	SMARCAL1 (ENSCHIG00000025342)	MARCHF4 (ENSCHIG00000025938)	XRCC5 (ENSCHIG00000022047)	TMEM169 (ENSCHIG00000023199)	PECR (ENSCHIG00000025963)	MREG (ENSCHIG00000024433)	FN1 (ENSCHIG00000021438) #19	ATIC (ENSCHIG00000018659) #20	ABCA12 (ENSCHIG00000019371) #21	ENSCHIG00000021676 #22	VWC2L (ENSCHIG00000023299) #23	ENSCHIG00000024996 #24	ENSCHIG00000025009 #24	IKZF2 (ENSCHIG00000008623) #25	ENSCHIG00000025711 #26	ENSCHIG00000015255	CPS1 (ENSCHIG00000025029) #28	LANCL1 (ENSCHIG00000015499) #29	MYL1 (ENSCHIG00000016096) #31	ACADL (ENSCHIG00000012492) #32	KANSL1L (ENSCHIG00000025531) #34	ENSCHIG00000017628 #35	UNC80 (ENSCHIG00000023318) #36	MAP2 (ENSCHIG00000000510) #37	ENSCHIG00000015978
Rambouillet Sheep	MODERN SPECIES	11	ENSOARG00020025597	RUFY4 (ENSOARG00020025590)	TNS1 (ENSOARG00020025486)	TNP1 (ENSOARG00020025444)	IGFBP5 (ENSOARG00020025439)	RPL37A (ENSOARG00020025429)	IGFBP2 (ENSOARG00020025420)	SMARCAL1 (ENSOARG00020025380)	MARCHF4 (ENSOARG00020025369)	XRCC5 (ENSOARG00020025342)	PECR (ENSOARG00020025327)	MREG (ENSOARG00020025322)	FN1 (ENSOARG00020024839) #19	ATIC (ENSOARG00020024672) #20	ABCA12 (ENSOARG00020024186) #21	ENSOARG00020023630 #22	VWC2L (ENSOARG00020023565) #23	SPAG16 (ENSOARG00020023425) #24	IKZF2 (ENSOARG00020023289) #25	ERBB4 (ENSOARG00020022203) #26	ENSOARG00020022121	ENSOARG00020022071	ENSOARG00020022058	CPS1 (ENSOARG00020021614) #28	LANCL1 (ENSOARG00020021560) #29	MYL1b (ENSOARG00020021419) #31	ACADL (ENSOARG00020021309) #32	KANSL1L (ENSOARG00020021126) #34	RPE (ENSOARG00020021044) #35	UNC80 (ENSOARG00020019570) #36	MAP2 (ENSOARG00020019287) #37
Caprinae	ANCESTRAL SPECIES																	ENSGT00940000156532.k.b #22
Rambouillet Sheep	MODERN SPECIES	4	ENSOARG00020010596	APBB1IP (ENSOARG00020010637)	CCNY (ENSOARG00020010831)	ENSOARG00020011089	CREM (ENSOARG00020011207)	CUL2 (ENSOARG00020014397)	ENSOARG00020014597	PARD3 (ENSOARG00020014835)	NRP1 (ENSOARG00020022479)	ITGB1 (ENSOARG00020022585)	ARL5B (ENSOARG00020022913)	ENSOARG00020022950	PLXDC2 (ENSOARG00020023004)	ENSOARG00020023295	NEBL (ENSOARG00020023328)	ENSOARG00020023735 #22	ENSOARG00020023745	SKIDA1 (ENSOARG00020023795)	MLLT10 (ENSOARG00020023844)	DNAJC1 (ENSOARG00020024307)	ENSOARG00020024323	COMMD3 (ENSOARG00020024334)	BMI1 (ENSOARG00020024353)	SPAG6 (ENSOARG00020024405)	PIP4K2A (ENSOARG00020024466)	ARMC3 (ENSOARG00020024507)	MSRB2 (ENSOARG00020024574)	PTF1A (ENSOARG00020024582)	ENSOARG00020024601	OTUD1 (ENSOARG00020024691)	KIAA1217 (ENSOARG00020024750)
Bovinae	ANCESTRAL SPECIES	5	ENSGT00940000154044.a.b	ENSGT00940000155400.B	ENSGT00390000000539	ENSGT00940000155890	ENSGT00940000158542	ENSGT00390000016988.a.b	ENSGT00940000157608	ENSGT00940000158179	ENSGT00940000153239.A	ENSGT00390000015276	ENSGT00940000156882	ENSGT00390000008926	ENSGT00940000155126 #19	ENSGT00390000004553 #20	ENSGT00940000157295 #21	ENSGT00940000156532.k #22	ENSGT00720000108792.B #23	ENSGT00940000155053 #24	ENSGT00940000157137 #25	ENSGT00940000154695 #26	ENSGT00940000157192 #28	ENSGT00530000063186.b.b #29	ENSGT01030000234570.d.a #31	ENSGT00940000157652 #32	ENSGT00530000063688.a #34	ENSGT00390000001447 #35	ENSGT00640000091496 #36	ENSGT00940000156597.b #37	ENSGT00940000158720.c.b.t	ENSGT00940000159094	ENSGT00950000182965.b
Bos	ANCESTRAL SPECIES	6	ENSGT00940000154044.a.b	ENSGT00940000155400.B	ENSGT00390000000539	ENSGT00940000155890	ENSGT00940000158542	ENSGT00390000016988.a.b	ENSGT00940000157608	ENSGT00940000158179	ENSGT00940000153239.A	ENSGT00390000015276	ENSGT00940000156882	ENSGT00390000008926	ENSGT00940000155126 #19	ENSGT00390000004553 #20	ENSGT00940000157295 #21	ENSGT00940000156532.k #22	ENSGT00720000108792.B #23	ENSGT00940000155053 #24	ENSGT00940000157137 #25	ENSGT00940000154695 #26	ENSGT00940000157192 #28	ENSGT00530000063186.b.b #29	ENSGT01030000234570.d.a #31	ENSGT00940000157652 #32	ENSGT00530000063688.a #34	ENSGT00390000001447 #35	ENSGT00640000091496 #36	ENSGT00940000156597.b #37	ENSGT00940000158720.c.b.t	ENSGT00940000159094	ENSGT00940000156307.b
Bos_a	ANCESTRAL SPECIES	4	ENSGT00940000154044.a.b	ENSGT00940000155400.B	ENSGT00390000000539	ENSGT00940000155890	ENSGT00940000158542	ENSGT00390000016988.a.b	ENSGT00940000157608	ENSGT00940000158179	ENSGT00940000153239.A	ENSGT00390000015276	ENSGT00940000156882	ENSGT00390000008926	ENSGT00940000155126 #19	ENSGT00390000004553 #20	ENSGT00940000157295 #21	ENSGT00940000156532.k #22	ENSGT00720000108792.B #23	ENSGT00940000155053 #24	ENSGT00940000157137 #25	ENSGT00940000154695 #26	ENSGT00940000157192 #28	ENSGT00530000063186.b.b #29	ENSGT01030000234570.d.a #31	ENSGT00940000157652 #32	ENSGT00530000063688.a #34	ENSGT00390000001447 #35	ENSGT00640000091496 #36	ENSGT00940000156597.b #37	ENSGT00940000158720.c.b.t	ENSGT00940000159094	ENSGT00940000156307.b
Wild yak	MODERN SPECIES	2452													FN1 (ENSBMUG00000023102) #19	ATIC (ENSBMUG00000022748) #20	ABCA12 (ENSBMUG00000022714) #21	ENSBMUG00000022648 #22	VWC2L (ENSBMUG00000022543) #23
Domestic yak	MODERN SPECIES	11	TNS1 (ENSBGRG00000001914)	ENSBGRG00000002184	TNP1 (ENSBGRG00000002189)	ENSBGRG00000002217	IGFBP5 (ENSBGRG00000002228)	IGFBP2 (ENSBGRG00000002242)	RPL37A (ENSBGRG00000002272)	SMARCAL1 (ENSBGRG00000002323)	MARCHF4 (ENSBGRG00000002448)	XRCC5 (ENSBGRG00000002486)	TMEM169 (ENSBGRG00000002710)	PECR (ENSBGRG00000002736)	FN1 (ENSBGRG00000002811) #19	ATIC (ENSBGRG00000002957) #20	ABCA12 (ENSBGRG00000003073) #21	BARD1 (ENSBGRG00000003261) #22	VWC2L (ENSBGRG00000003498) #23	SPAG16 (ENSBGRG00000003519) #24	IKZF2 (ENSBGRG00000003601) #25	ENSBGRG00000003764	ERBB4 (ENSBGRG00000003801) #26	CPS1 (ENSBGRG00000004265) #28	LANCL1 (ENSBGRG00000004687) #29	MYL1 (ENSBGRG00000004749) #31	ACADL (ENSBGRG00000004885) #32	KANSL1L (ENSBGRG00000004930) #34	ENSBGRG00000005051 #35	UNC80 (ENSBGRG00000005202) #36	MAP2 (ENSBGRG00000005995) #37	ENSBGRG00000006119	PTH2R (ENSBGRG00000006150)
Bos_b	ANCESTRAL SPECIES	20	ENSGT00940000155400.B	ENSGT00390000000539	ENSGT00940000155890	ENSGT00940000158542	ENSGT00390000016988.a.b	ENSGT00940000157608	ENSGT00940000158179	ENSGT00940000153239.A	ENSGT00390000015276	ENSGT00940000156882	ENSGT01050000247862	ENSGT00390000008926	ENSGT00940000155126 #19	ENSGT00390000004553 #20	ENSGT00940000157295 #21	ENSGT00940000156532.k #22	ENSGT00720000108792.B #23	ENSGT00940000155053 #24	ENSGT00940000157137 #25	ENSGT00940000154695 #26	ENSGT00940000157192 #28	ENSGT00530000063186.b.b #29	ENSGT01030000234570.d.a #31
Cow	MODERN SPECIES	11	TNS1 (ENSBTAG00000002485)	TNP1 (ENSBTAG00000019003)	IGFBP5 (ENSBTAG00000054218)	IGFBP2 (ENSBTAG00000005596)	RPL37A (ENSBTAG00000051254)	SMARCAL1 (ENSBTAG00000003843)	MARCHF4 (ENSBTAG00000049897)	XRCC5 (ENSBTAG00000010426)	PECR (ENSBTAG00000006821)	TMEM169 (ENSBTAG00000010413)	MREG (ENSBTAG00000013215)	FN1 (ENSBTAG00000008300) #19	ATIC (ENSBTAG00000019274) #20	ABCA12 (ENSBTAG00000003472) #21	ENSBTAG00000051517	BARD1 (ENSBTAG00000033690) #22	VWC2L (ENSBTAG00000053460) #23	ENSBTAG00000052399 #24	ENSBTAG00000018549 #24	IKZF2 (ENSBTAG00000037804) #25	ENSBTAG00000053477 #26	ENSBTAG00000005239	ERBB4 (ENSBTAG00000012647) #26	CPS1 (ENSBTAG00000016662) #28	LANCL1 (ENSBTAG00000015066) #29	MYL1 (ENSBTAG00000009707) #31	ENSBTAG00000010722	ACADL (ENSBTAG00000010579) #32	KANSL1L (ENSBTAG00000021600) #34	RPE (ENSBTAG00000054647) #35	UNC80 (ENSBTAG00000015415) #36
Hybrid Bos Indicus	MODERN SPECIES	11	ENSBIXG00005024424	TNP1 (ENSBIXG00005024456)	IGFBP5 (ENSBIXG00005004180)	IGFBP2 (ENSBIXG00005004188)	ENSBIXG00005024536	RPL37A (ENSBIXG00005024599)	SMARCAL1 (ENSBIXG00005024785)	MARCHF4 (ENSBIXG00005024854)	XRCC5 (ENSBIXG00005024910)	TMEM169 (ENSBIXG00005024972)	PECR (ENSBIXG00005025092)	ENSBIXG00005004282	FN1 (ENSBIXG00005025569) #19	ATIC (ENSBIXG00005025675) #20	ABCA12 (ENSBIXG00005025713) #21	ENSBIXG00005005782 #22	VWC2L (ENSBIXG00005004449) #23	SPAG16 (ENSBIXG00005004460) #24	IKZF2 (ENSBIXG00005004492) #25	ENSBIXG00005026391	ENSBIXG00005026408	ENSBIXG00005026433	ENSBIXG00005007409	ERBB4 (ENSBIXG00005026738) #26	CPS1 (ENSBIXG00005027520) #28	LANCL1 (ENSBIXG00005027712) #29	MYL1 (ENSBIXG00005027778) #31	ENSBIXG00005004776	ENSBIXG00005027813	ENSBIXG00005027821	ACADL (ENSBIXG00005027851) #32
American bison	MODERN SPECIES	3330	TNS1 (ENSBBBG00000009746)	TNP1 (ENSBBBG00000001609)	ENSBBBG00000001612	IGFBP2 (ENSBBBG00000009764)	RPL37A (ENSBBBG00000009773)	SMARCAL1 (ENSBBBG00000009787)	MARCHF4 (ENSBBBG00000009795)	XRCC5 (ENSBBBG00000009803)	TMEM169 (ENSBBBG00000009808)	PECR (ENSBBBG00000008537)	MREG (ENSBBBG00000001636)	FN1 (ENSBBBG00000010079) #19	ATIC (ENSBBBG00000010156) #20	ABCA12 (ENSBBBG00000010212) #21	ENSBBBG00000010218	BARD1 (ENSBBBG00000010253) #22	VWC2L (ENSBBBG00000000125) #23	SPAG16 (ENSBBBG00000000106) #24	IKZF2 (ENSBBBG00000000044) #25	ERBB4 (ENSBBBG00000010300) #26	CPS1 (ENSBBBG00000010353) #28	LANCL1 (ENSBBBG00000010389) #29	MYL1 (ENSBBBG00000010407) #31	ACADL (ENSBBBG00000001806) #32	KANSL1L (ENSBBBG00000010441) #34	ENSBBBG00000007586 #35	UNC80 (ENSBBBG00000010561) #36	MAP2 (ENSBBBG00000010617) #37	ENSBBBG00000010626	PTH2R (ENSBBBG00000010642)	ENSBBBG00000010646
Bovidae	ANCESTRAL SPECIES																	ENSGT00940000156532.l #22
Bovinae	ANCESTRAL SPECIES																	ENSGT00940000156532.l #22
Bos	ANCESTRAL SPECIES																	ENSGT00940000156532.l #22
Bos_b	ANCESTRAL SPECIES	9	ENSGT00550000074867	ENSGT00940000161424	ENSGT00550000075024	ENSGT00530000063425.a.b	ENSGT00940000159118	ENSGT00390000006820	ENSGT00940000158817	ENSGT00940000163055	ENSGT00940000157364.C	ENSGT00950000183010.a.b.a.a.a.a.a.b.b.i.a.a.a	ENSGT00940000158952	ENSGT00940000154292.a.b	ENSGT00940000163627	ENSGT00940000153431.a.l.a	ENSGT00940000159080	ENSGT00940000156532.l #22	ENSGT00390000003855.a	ENSGT00530000063603.B	ENSGT00390000007723	ENSGT00390000011433	ENSGT00390000011103.A	ENSGT00940000162821.h	ENSGT00390000005045	ENSGT00940000154864.b	ENSGT00940000155564	ENSGT00940000156568	ENSGT00950000183166.a.a.a.b	ENSGT00940000165870	ENSGT00900000141103	ENSGT00440000033965	ENSGT00940000155559.b
Hybrid Bos Indicus	MODERN SPECIES	2	PPP1R21 (ENSBIXG00005020937)	STON1 (ENSBIXG00005020833)	GTF2A1L (ENSBIXG00005020773)	LHCGR (ENSBIXG00005020676)	ENSBIXG00005020568	ENSBIXG00005007156	FSHR (ENSBIXG00005020542)	NRXN1 (ENSBIXG00005020353)	ENSBIXG00005019055	ENSBIXG00005019035	ENSBIXG00005019024	ENSBIXG00005018993	ENSBIXG00005018968	ENSBIXG00005018960	ASB3 (ENSBIXG00005018919)	ENSBIXG00005018883 #22	CHAC2 (ENSBIXG00005018860)	ERLEC1 (ENSBIXG00005018839)	GPR75 (ENSBIXG00005018758)	PSME4 (ENSBIXG00005018741)	ENSBIXG00005018704	C2orf73 (ENSBIXG00005018616)	SPTBN1 (ENSBIXG00005003004)	EML6 (ENSBIXG00005018364)	RTN4 (ENSBIXG00005018220)	CLHC1 (ENSBIXG00005018120)	ENSBIXG00005018073	MTIF2 (ENSBIXG00005002925)	ENSBIXG00005017989	CCDC88A (ENSBIXG00005017956)	CFAP36 (ENSBIXG00005017832)
Cow	MODERN SPECIES	2	MSH6 (ENSBTAG00000001424)	FBXO11 (ENSBTAG00000001425)	FOXN2 (ENSBTAG00000015151)	PPP1R21 (ENSBTAG00000002570)	STON1 (ENSBTAG00000004168)	GTF2A1L (ENSBTAG00000023999)	LHCGR (ENSBTAG00000016573)	ENSBTAG00000027015	FSHR (ENSBTAG00000032424)	NRXN1 (ENSBTAG00000046199)	NRXN1 (ENSBTAG00000024021)	ENSBTAG00000052116	ENSBTAG00000027786	ENSBTAG00000002943	ASB3 (ENSBTAG00000019458)	ENSBTAG00000051601 #22	CHAC2 (ENSBTAG00000019459)	ERLEC1 (ENSBTAG00000008068)	GPR75 (ENSBTAG00000000102)	PSME4 (ENSBTAG00000020262)	ENSBTAG00000024019	ACYP2 (ENSBTAG00000006852)	ENSBTAG00000046563	C11H2orf73 (ENSBTAG00000006861)	SPTBN1 (ENSBTAG00000006995)	EML6 (ENSBTAG00000011101)	RTN4 (ENSBTAG00000011104)	CLHC1 (ENSBTAG00000000295)	RPS27A (ENSBTAG00000015473)	MTIF2 (ENSBTAG00000015481)	PRORSD1 (ENSBTAG00000017460)
Bos_a	ANCESTRAL SPECIES																	ENSGT00940000156532.l #22
Wild yak	MODERN SPECIES	2263															ENSBMUG00000024771	ENSBMUG00000024762 #22	ASB3 (ENSBMUG00000024758)	CHAC2 (ENSBMUG00000024738)
Caprinae	ANCESTRAL SPECIES	3	ENSGT00940000163651.l	ENSGT00940000164306	ENSGT00940000163783	ENSGT00940000162241	ENSGT00940000154619.g.b.a.a.a	ENSGT00940000154619.g.a.b.a	ENSGT00940000163945.a	ENSGT00940000163945.b	ENSGT00940000162532	ENSGT00940000163044.d	ENSGT00940000163044.c	ENSGT00440000039287	ENSGT00950000182755.b.a.a.a.a.a.a.a.b.b.a.b	ENSGT00950000182755.b.a.a.a.a.a.a.b.i	ENSGT00950000182755.b.a.a.a.a.a.a.b.j	ENSGT00940000156532.l #22	ENSGT01030000234638.b.a.a	ENSGT00390000002121	ENSGT00940000159016	ENSGT00390000008063	ENSGT01100000263497.E.a.a	ENSGT00390000006806	ENSGT00940000156708.a.a	ENSGT00390000012267	ENSGT00390000003817	ENSGT00940000161361	ENSGT00940000160152	ENSGT00940000161195	ENSGT00940000155828	ENSGT00870000137755	ENSGT00390000010768
Rambouillet Sheep	MODERN SPECIES	21	ENSOARG00020000670	ENSOARG00020000655	OR7D2 (ENSOARG00020000640)	ENSOARG00020000630	ZNF317 (ENSOARG00020000578)	ENSOARG00020000555	ENSOARG00020000513	ENSOARG00020000501	ENSOARG00020000490	ENSOARG00020000485	OR1M1 (ENSOARG00020000458)	ENSOARG00020000435	ENSOARG00020000419	ENSOARG00020000407	ENSOARG00020000232	ENSOARG00020013719 #22	MAN2B1 (ENSOARG00020012993)	WDR83OS (ENSOARG00020012900)	WDR83 (ENSOARG00020012835)	DHPS (ENSOARG00020012703)	ENSOARG00020012653	FBXW9 (ENSOARG00020012297)	TNPO2 (ENSOARG00020012156)	TRIR (ENSOARG00020012000)	ASNA1 (ENSOARG00020011930)	BEST2 (ENSOARG00020011833)	JUNB (ENSOARG00020011427)	PRDX2 (ENSOARG00020011331)	THSD8 (ENSOARG00020011281)	RNASEH2A (ENSOARG00020011239)	RTBDN (ENSOARG00020011079)
Goat	MODERN SPECIES	26	ENSCHIG00000026561	ENSCHIG00000001750	ENSCHIG00000008158	ZNF317 (ENSCHIG00000015369)	ENSCHIG00000021713	ENSCHIG00000023752	ENSCHIG00000016520	ENSCHIG00000022442	ENSCHIG00000004140	ENSCHIG00000004337	ENSCHIG00000026471	ENSCHIG00000021101	ENSCHIG00000020779	ENSCHIG00000008992	ENSCHIG00000019636	ENSCHIG00000016295 #22	MAN2B1 (ENSCHIG00000001921)	WDR83OS (ENSCHIG00000020903)	WDR83 (ENSCHIG00000025793)	DHPS (ENSCHIG00000011017)	ENSCHIG00000018933	FBXW9 (ENSCHIG00000027225)	TNPO2 (ENSCHIG00000011718)	TRIR (ENSCHIG00000017848)	GET3 (ENSCHIG00000023078)	BEST2 (ENSCHIG00000009210)	HOOK2 (ENSCHIG00000017730)	JUNB (ENSCHIG00000007846)	ENSCHIG00000008839	RNASEH2A (ENSCHIG00000014460)	RTBDN (ENSCHIG00000018795)
Siberian musk deer	MODERN SPECIES	352	RUFY4 (ENSMMSG00000016588)	TNS1 (ENSMMSG00000015987)	TNP1 (ENSMMSG00000015890)	IGFBP5 (ENSMMSG00000015864)	IGFBP2 (ENSMMSG00000015853)	RPL37A (ENSMMSG00000015781)	SMARCAL1 (ENSMMSG00000015705)	MARCHF4 (ENSMMSG00000015684)	XRCC5 (ENSMMSG00000015657)	TMEM169 (ENSMMSG00000024214)	PECR (ENSMMSG00000024210)	ENSMMSG00000024206	FN1 (ENSMMSG00000022388) #19	ATIC (ENSMMSG00000022097) #20	ABCA12 (ENSMMSG00000021923) #21	BARD1 (ENSMMSG00000021660) #22	VWC2L (ENSMMSG00000021613) #23	SPAG16 (ENSMMSG00000021415) #24	IKZF2 (ENSMMSG00000021166) #25	ENSMMSG00000021126	ERBB4 (ENSMMSG00000020665) #26	ENSMMSG00000020623	CPS1 (ENSMMSG00000020103) #28	LANCL1 (ENSMMSG00000020057) #29	MYL1 (ENSMMSG00000019985) #31	ACADL (ENSMMSG00000019943) #32	ENSMMSG00000019930	KANSL1L (ENSMMSG00000019864) #34	ENSMMSG00000019805 #35	UNC80 (ENSMMSG00000019152) #36	MAP2 (ENSMMSG00000018946) #37
Camelidae	ANCESTRAL SPECIES	58													ENSGT00940000155126 #19	ENSGT00390000004553 #20	ENSGT00940000157295 #21	ENSGT00940000156532 #22	ENSGT00720000108792.B #23	ENSGT00940000155053 #24	ENSGT00940000157137 #25	ENSGT00390000002231.d.b	ENSGT00940000154695 #26	ENSGT00940000157192 #28	ENSGT00530000063186.b.b #29	ENSGT01030000234570.d.a #31	ENSGT00940000157652 #32	ENSGT00530000063688.a #34	ENSGT00390000001447 #35	ENSGT00640000091496 #36	ENSGT00940000156597.b #37	ENSGT00940000159094	ENSGT00940000156307.b
Arabian camel	MODERN SPECIES	31	SLC40A1 (ENSCDRG00005006998)	ASDURF (ENSCDRG00005007145)	ASNSD1 (ENSCDRG00005007073)	ANKAR (ENSCDRG00005007243)	OSGEPL1 (ENSCDRG00005007378)	ORMDL1 (ENSCDRG00005007425)	PMS1 (ENSCDRG00005007488)	MSTN (ENSCDRG00005007742)	C2orf88 (ENSCDRG00005007770)	HIBCH (ENSCDRG00005007807)	INPP1 (ENSCDRG00005007903)	MFSD6 (ENSCDRG00005007954)	FN1 (ENSCDRG00005008111) #19	ATIC (ENSCDRG00005009297) #20	ABCA12 (ENSCDRG00005009551) #21	BARD1 (ENSCDRG00005010435) #22	VWC2L (ENSCDRG00005010599) #23	SPAG16 (ENSCDRG00005010669) #24	IKZF2 (ENSCDRG00005010931) #25	ENSCDRG00005011221	ERBB4 (ENSCDRG00005011281) #26	ENSCDRG00005011902	CPS1 (ENSCDRG00005011935) #28	LANCL1 (ENSCDRG00005012357) #29	MYL1 (ENSCDRG00005012450) #31	ACADL (ENSCDRG00005012612) #32	KANSL1L (ENSCDRG00005012697) #34	ENSCDRG00005012826 #35	UNC80 (ENSCDRG00005012995) #36	MAP2 (ENSCDRG00005014163) #37	ENSCDRG00005014776
Alpaca	MODERN SPECIES	2225															ABCA12 (ENSVPAG00000004266) #21	BARD1 (ENSVPAG00000004265) #22	VWC2L (ENSVPAG00000004264) #23	SPAG16 (ENSVPAG00000004263) #24	IKZF2 (ENSVPAG00000004262) #25	ERBB4 (ENSVPAG00000004261) #26
Laurasiatheria_b	ANCESTRAL SPECIES	16	ENSGT00940000154044.a.b	ENSGT00940000155400.B	ENSGT00390000000539	ENSGT00940000155890	ENSGT00940000158542	ENSGT00390000016988.a.b	ENSGT00940000157608	ENSGT00940000158179	ENSGT00940000153239.A	ENSGT00390000015276	ENSGT00940000156882	ENSGT00390000008926	ENSGT00940000155126 #19	ENSGT00390000004553 #20	ENSGT00940000157295 #21	ENSGT00940000156532 #22	ENSGT00720000108792.B #23	ENSGT00940000155053 #24	ENSGT00940000157137 #25	ENSGT00940000154695 #26	ENSGT00940000157192 #28	ENSGT00530000063186.b.b #29	ENSGT01030000234570.d.a #31	ENSGT00940000157652 #32	ENSGT00530000063688.a #34	ENSGT00390000001447 #35	ENSGT00640000091496 #36	ENSGT00940000156597.b #37	ENSGT00940000159094	ENSGT00940000156307.b	ENSGT00390000012547.b
Laurasiatheria_c	ANCESTRAL SPECIES	18	ENSGT00940000154044.a.b	ENSGT00940000155400.B	ENSGT00390000000539	ENSGT00940000155890	ENSGT00940000158542	ENSGT00390000016988.a.b	ENSGT00940000157608	ENSGT00940000158179	ENSGT00940000153239.A	ENSGT00390000015276	ENSGT00940000156882	ENSGT00390000008926	ENSGT00940000155126 #19	ENSGT00390000004553 #20	ENSGT00940000157295 #21	ENSGT00940000156532 #22	ENSGT00720000108792.B #23	ENSGT00940000155053 #24	ENSGT00940000157137 #25	ENSGT00940000154695 #26	ENSGT00940000157192 #28	ENSGT00530000063186.b.b #29	ENSGT01030000234570.d.a #31	ENSGT00940000157652.f #32	ENSGT00530000063688.a #34	ENSGT00390000001447 #35	ENSGT00640000091496 #36	ENSGT00940000156597.b #37	ENSGT00940000159094	ENSGT00940000156307.b	ENSGT00390000012547.b
Chiroptera	ANCESTRAL SPECIES	11	ENSGT00940000155400.B	ENSGT00390000000539	ENSGT00940000155890	ENSGT00940000158542	ENSGT00390000016988.b	ENSGT00390000016988.a.b	ENSGT00940000157608	ENSGT00940000158179	ENSGT00940000153239.A	ENSGT00390000015276	ENSGT00940000156882	ENSGT00390000008926	ENSGT00940000155126 #19	ENSGT00390000004553 #20	ENSGT00940000157295 #21	ENSGT00940000156532 #22	ENSGT00720000108792.B #23	ENSGT00940000155053 #24	ENSGT00940000157137 #25	ENSGT00940000154695 #26	ENSGT00940000157192 #28	ENSGT00530000063186.b.b #29	ENSGT01030000234570.d.a #31	ENSGT00940000157652.f #32	ENSGT00530000063688.a #34	ENSGT00390000001447 #35	ENSGT00640000091496 #36	ENSGT00940000156597.b #37	ENSGT00940000159094	ENSGT00940000156307.b	ENSGT00390000012547.b
Microchiroptera	ANCESTRAL SPECIES	15	ENSGT00940000155400.B	ENSGT00390000000539	ENSGT00940000155890	ENSGT00940000158542	ENSGT00390000016988.b	ENSGT00390000016988.a.b	ENSGT00940000157608	ENSGT00940000158179	ENSGT00940000153239.A	ENSGT00390000015276	ENSGT00940000156882	ENSGT00390000008926	ENSGT00940000155126 #19	ENSGT00390000004553 #20	ENSGT00940000157295 #21	ENSGT00940000156532 #22	ENSGT00720000108792.B #23	ENSGT00940000155053 #24	ENSGT00940000157137 #25	ENSGT00940000154695 #26	ENSGT00940000157192 #28	ENSGT00530000063186.b.b #29	ENSGT01030000234570.d.a #31	ENSGT00940000157652.f #32	ENSGT00530000063688.a #34	ENSGT00390000001447 #35	ENSGT00640000091496 #36	ENSGT00940000156597.b #37	ENSGT00940000159094	ENSGT00940000156307.b	ENSGT00390000012547.b
Greater horseshoe bat	MODERN SPECIES	26	TNS1 (ENSRFEG00010012495)	TNP1 (ENSRFEG00010013265)	IGFBP5 (ENSRFEG00010013314)	IGFBP2 (ENSRFEG00010013360)	ENSRFEG00010013429	RPL37A (ENSRFEG00010013449)	SMARCAL1 (ENSRFEG00010013666)	MARCHF4 (ENSRFEG00010013760)	XRCC5 (ENSRFEG00010013923)	TMEM169 (ENSRFEG00010014015)	PECR (ENSRFEG00010014067)	MREG (ENSRFEG00010014124)	FN1 (ENSRFEG00010014248) #19	ATIC (ENSRFEG00010014882) #20	ABCA12 (ENSRFEG00010014979) #21	BARD1 (ENSRFEG00010016379) #22	VWC2L (ENSRFEG00010017204) #23	SPAG16 (ENSRFEG00010017261) #24	ENSRFEG00010017326	IKZF2 (ENSRFEG00010017362) #25	ENSRFEG00010017533	ENSRFEG00010017581	ERBB4 (ENSRFEG00010017623) #26	ENSRFEG00010018450	CPS1 (ENSRFEG00010018496) #28	LANCL1 (ENSRFEG00010018871) #29	MYL1 (ENSRFEG00010018919) #31	ACADL (ENSRFEG00010019011) #32	KANSL1L (ENSRFEG00010019059) #34	ENSRFEG00010019086 #35	UNC80 (ENSRFEG00010019184) #36
Microbat	MODERN SPECIES	940	TNS1 (ENSMLUG00000007467)	TNP1 (ENSMLUG00000000771)	IGFBP5 (ENSMLUG00000025891)	IGFBP2 (ENSMLUG00000000766)	ENSMLUG00000000762	SMARCAL1 (ENSMLUG00000001370)	ENSMLUG00000025408	MARCHF4 (ENSMLUG00000013680)	XRCC5 (ENSMLUG00000013661)	TMEM169 (ENSMLUG00000009531)	PECR (ENSMLUG00000013650)	MREG (ENSMLUG00000013643)	FN1 (ENSMLUG00000001838) #19	ATIC (ENSMLUG00000001830) #20	ABCA12 (ENSMLUG00000014147) #21	BARD1 (ENSMLUG00000014140) #22	VWC2L (ENSMLUG00000004050) #23	ENSMLUG00000004039 #24	ENSMLUG00000024505 #25	IKZF2 (ENSMLUG00000012494) #25	ENSMLUG00000023988 #26	ENSMLUG00000022171 #26	ENSMLUG00000016092 #26	CPS1 (ENSMLUG00000015090) #28	LANCL1 (ENSMLUG00000002650) #29	MYL1 (ENSMLUG00000002641) #31	ENSMLUG00000017730	ACADL (ENSMLUG00000014508) #32	KANSL1L (ENSMLUG00000014487) #34	ENSMLUG00000014477 #35	UNC80 (ENSMLUG00000014442) #36
Megabat	MODERN SPECIES	848															ABCA12 (ENSPVAG00000002287) #21	BARD1 (ENSPVAG00000002286) #22
Equus	ANCESTRAL SPECIES	51	ENSGT00940000154044.a.b	ENSGT00940000155400.B	ENSGT00390000000539	ENSGT00940000155890	ENSGT00940000158542	ENSGT00390000016988.a.b	ENSGT00940000157608	ENSGT00940000158179	ENSGT00940000153239.A	ENSGT00390000015276	ENSGT00940000156882	ENSGT00390000008926	ENSGT00940000155126 #19	ENSGT00390000004553 #20	ENSGT00940000157295 #21	ENSGT00940000156532 #22	ENSGT00720000108792.B #23	ENSGT00940000155053 #24	ENSGT00940000157137 #25	ENSGT00940000154695 #26	ENSGT00940000157192 #28	ENSGT00530000063186.b.b #29	ENSGT01030000234570.d.a #31	ENSGT00940000157652.e #32	ENSGT00530000063688.a #34	ENSGT00390000001447 #35	ENSGT00640000091496 #36	ENSGT00940000156597.b #37
Horse	MODERN SPECIES	27	TNS1 (ENSECAG00000014711)	TNP1 (ENSECAG00000014618)	ENSECAG00000054451	IGFBP5 (ENSECAG00000013425)	IGFBP2 (ENSECAG00000035279)	RPL37A (ENSECAG00000030892)	SMARCAL1 (ENSECAG00000007683)	MARCHF4 (ENSECAG00000007360)	XRCC5 (ENSECAG00000015940)	TMEM169 (ENSECAG00000015399)	PECR (ENSECAG00000013131)	MREG (ENSECAG00000052438)	FN1 (ENSECAG00000000701) #19	ATIC (ENSECAG00000014653) #20	ABCA12 (ENSECAG00000009468) #21	BARD1 (ENSECAG00000002113) #22	VWC2L (ENSECAG00000001965) #23	ENSECAG00000056274	SPAG16 (ENSECAG00000000274) #24	IKZF2 (ENSECAG00000032639) #25	ENSECAG00000039974	ERBB4 (ENSECAG00000022865) #26	CPS1 (ENSECAG00000028289) #28	ENSECAG00000049241	LANCL1 (ENSECAG00000009197) #29	MYL1 (ENSECAG00000005145) #31	ENSECAG00000044963 #32	ENSECAG00000057220	KANSL1L (ENSECAG00000000018) #34	ENSECAG00000030135 #35	UNC80 (ENSECAG00000024348) #36
Donkey	MODERN SPECIES	10	ENSEASG00005012541	ENSEASG00005025318	ENSEASG00005012566	IGFBP2 (ENSEASG00005012571)	ENSEASG00005030571	RPL37A (ENSEASG00005012575)	SMARCAL1 (ENSEASG00005012579)	MARCHF4 (ENSEASG00005012582)	XRCC5 (ENSEASG00005012633)	TMEM169 (ENSEASG00005035772)	PECR (ENSEASG00005012695)	MREG (ENSEASG00005028536)	FN1 (ENSEASG00005012814) #19	ATIC (ENSEASG00005013331) #20	ABCA12 (ENSEASG00005013342) #21	BARD1 (ENSEASG00005013363) #22	VWC2L (ENSEASG00005013364) #23	ENSEASG00005013370 #24	IKZF2 (ENSEASG00005013374) #25	ENSEASG00005013381 #26
Carnivora	ANCESTRAL SPECIES	17	ENSGT00940000154044.a.b	ENSGT00940000155400.B	ENSGT00390000000539	ENSGT00940000155890	ENSGT00940000158542	ENSGT00390000016988.a.b	ENSGT00940000157608	ENSGT00940000158179	ENSGT00940000153239.A	ENSGT00390000015276	ENSGT00940000156882	ENSGT00390000008926	ENSGT00940000155126 #19	ENSGT00390000004553 #20	ENSGT00940000157295 #21	ENSGT00940000156532 #22	ENSGT00720000108792.B #23	ENSGT00940000155053 #24	ENSGT00940000157137 #25	ENSGT00940000154695 #26	ENSGT00940000157192 #28	ENSGT00530000063186.b.b #29	ENSGT01030000234570.d.a #31	ENSGT00940000157652 #32	ENSGT00530000063688.a #34	ENSGT00390000001447 #35	ENSGT00640000091496 #36	ENSGT00940000156597.b #37	ENSGT00940000159094	ENSGT00940000156307.b	ENSGT00390000012547.b
Caniformia	ANCESTRAL SPECIES	14	ENSGT00940000154044.a.b	ENSGT00940000155400.B	ENSGT00390000000539	ENSGT00940000155890	ENSGT00940000158542	ENSGT00390000016988.a.b	ENSGT00940000157608	ENSGT00940000158179	ENSGT00940000153239.A	ENSGT00390000015276	ENSGT00940000156882	ENSGT00390000008926	ENSGT00940000155126 #19	ENSGT00390000004553 #20	ENSGT00940000157295 #21	ENSGT00940000156532 #22	ENSGT00720000108792.B #23	ENSGT00940000155053 #24	ENSGT00940000157137 #25	ENSGT00940000154695 #26	ENSGT00940000157192 #28	ENSGT00530000063186.b.b #29	ENSGT01030000234570.d.a #31	ENSGT00940000157652 #32	ENSGT00530000063688.a #34	ENSGT00390000001447 #35	ENSGT00640000091496 #36	ENSGT00940000156597.b #37	ENSGT00940000159094	ENSGT00940000156307.b	ENSGT00390000012547.b
Caniformia_b	ANCESTRAL SPECIES	13	ENSGT00940000154044.a.b	ENSGT00940000155400.B	ENSGT00390000000539	ENSGT00940000155890	ENSGT00940000158542	ENSGT00390000016988.a.b	ENSGT00940000157608	ENSGT00940000158179	ENSGT00940000153239.A	ENSGT00390000015276	ENSGT00940000156882.l	ENSGT00390000008926	ENSGT00940000155126 #19	ENSGT00390000004553 #20	ENSGT00940000157295 #21	ENSGT00940000156532 #22	ENSGT00720000108792.B #23	ENSGT00940000155053 #24	ENSGT00940000157137 #25	ENSGT00940000154695 #26	ENSGT00940000157192 #28	ENSGT00530000063186.b.b #29	ENSGT01030000234570.d.a #31	ENSGT00940000157652 #32	ENSGT00530000063688.a #34	ENSGT00390000001447 #35	ENSGT00640000091496 #36	ENSGT00940000156597.b #37	ENSGT00940000159094	ENSGT00940000156307.b	ENSGT00390000012547.b
Ursidae	ANCESTRAL SPECIES	7	ENSGT00940000154044.a.b	ENSGT00940000155400.B	ENSGT00390000000539	ENSGT00940000155890	ENSGT00940000158542	ENSGT00390000016988.a.b	ENSGT00940000157608	ENSGT00940000158179	ENSGT00940000153239.A	ENSGT00390000015276	ENSGT00940000156882.l	ENSGT00390000008926	ENSGT00940000155126 #19	ENSGT00390000004553 #20	ENSGT00940000157295 #21	ENSGT00940000156532 #22	ENSGT00720000108792.B #23	ENSGT00940000155053 #24	ENSGT00940000157137 #25	ENSGT00940000154695 #26	ENSGT00940000157192 #28	ENSGT00530000063186.b.b #29	ENSGT01030000234570.d.a.c.b #31	ENSGT00940000157652 #32	ENSGT00530000063688.a #34	ENSGT00390000001447 #35	ENSGT00640000091496 #36	ENSGT00940000156597.b #37	ENSGT00940000158720.c.b.cb	ENSGT00940000159094	ENSGT00940000156307.b
Ursus	ANCESTRAL SPECIES	12	ENSGT00940000154044.a.b	ENSGT00940000155400.B	ENSGT00390000000539	ENSGT00940000155890	ENSGT00940000158542	ENSGT00390000016988.a.b	ENSGT00940000157608	ENSGT00940000158179	ENSGT00940000153239.A	ENSGT00390000015276	ENSGT00940000156882.l	ENSGT00390000008926	ENSGT00940000155126 #19	ENSGT00390000004553 #20	ENSGT00940000157295 #21	ENSGT00940000156532 #22	ENSGT00720000108792.B #23
American black bear	MODERN SPECIES	5314																BARD1 (ENSUAMG00000007688) #22
Polar bear	MODERN SPECIES	169	RUFY4 (ENSUMAG00000019692)	TNS1 (ENSUMAG00000019767)	TNP1 (ENSUMAG00000020130)	IGFBP5 (ENSUMAG00000020139)	IGFBP2 (ENSUMAG00000020155)	RPL37A (ENSUMAG00000020158)	SMARCAL1 (ENSUMAG00000020164)	MARCHF4 (ENSUMAG00000020173)	XRCC5 (ENSUMAG00000020179)	TMEM169 (ENSUMAG00000000084)	PECR (ENSUMAG00000000160)	MREG (ENSUMAG00000000450)	FN1 (ENSUMAG00000000466) #19	ATIC (ENSUMAG00000000497) #20	ABCA12 (ENSUMAG00000000511) #21	BARD1 (ENSUMAG00000000925) #22	VWC2L (ENSUMAG00000001034) #23
Giant Panda	MODERN SPECIES	11	ENSAMEG00000024718	TNS1 (ENSAMEG00000003235)	TNP1 (ENSAMEG00000003356)	IGFBP5 (ENSAMEG00000027149)	IGFBP2 (ENSAMEG00000003374)	RPL37A (ENSAMEG00000003377)	SMARCAL1 (ENSAMEG00000003379)	MARCHF4 (ENSAMEG00000003418)	XRCC5 (ENSAMEG00000003422)	TMEM169 (ENSAMEG00000026744)	PECR (ENSAMEG00000003490)	MREG (ENSAMEG00000026110)	FN1 (ENSAMEG00000003517) #19	ATIC (ENSAMEG00000003629) #20	ABCA12 (ENSAMEG00000003679) #21	BARD1 (ENSAMEG00000003804) #22	VWC2L (ENSAMEG00000003842) #23	SPAG16 (ENSAMEG00000008081) #24	IKZF2 (ENSAMEG00000008058) #25	ERBB4 (ENSAMEG00000007301) #26	CPS1 (ENSAMEG00000005080) #28	LANCL1 (ENSAMEG00000005046) #29	MYL1 (ENSAMEG00000005031) #31	ACADL (ENSAMEG00000004978) #32	KANSL1L (ENSAMEG00000004973) #34	ENSAMEG00000004965 #35	UNC80 (ENSAMEG00000004864) #36	MAP2 (ENSAMEG00000014971) #37	ENSAMEG00000030710	PTH2R (ENSAMEG00000015327)	PIKFYVE (ENSAMEG00000015268)
Mustelinae	ANCESTRAL SPECIES	44												ENSGT00390000008926	ENSGT00940000155126 #19	ENSGT00390000004553 #20	ENSGT00940000157295 #21	ENSGT00940000156532 #22	ENSGT00720000108792.B #23	ENSGT00940000155053.lb #24	ENSGT00940000157137 #25	ENSGT00940000154695 #26	ENSGT00940000157192 #28	ENSGT00530000063186.b.b #29	ENSGT01030000234570.d.a #31	ENSGT00940000157652 #32	ENSGT00530000063688.a #34	ENSGT00390000001447 #35	ENSGT00640000091496 #36	ENSGT00940000156597.b #37	ENSGT00940000159094	ENSGT00940000156307.b	ENSGT00390000012547.b
Ferret	MODERN SPECIES	289												MREG (ENSMPUG00000007637)	FN1 (ENSMPUG00000007652) #19	ATIC (ENSMPUG00000007676) #20	ABCA12 (ENSMPUG00000007789) #21	BARD1 (ENSMPUG00000007816) #22	ENSMPUG00000019824	VWC2L (ENSMPUG00000007822) #23	ENSMPUG00000007826 #24	ENSMPUG00000007834 #24	IKZF2 (ENSMPUG00000007839) #25	ENSMPUG00000007887	ERBB4 (ENSMPUG00000007892) #26	CPS1 (ENSMPUG00000007909) #28	LANCL1 (ENSMPUG00000007928) #29	MYL1 (ENSMPUG00000007933) #31	ACADL (ENSMPUG00000007937) #32	KANSL1L (ENSMPUG00000007941) #34	ENSMPUG00000007948 #35	UNC80 (ENSMPUG00000008005) #36	MAP2 (ENSMPUG00000008039) #37
American mink	MODERN SPECIES	107												ENSNVIG00000011301	FN1 (ENSNVIG00000010336) #19	PUR9 (ENSNVIG00000010219) #20	ABCA12 (ENSNVIG00000010058) #21	BARD1 (ENSNVIG00000009921) #22	VWC2L (ENSNVIG00000009906) #23	SPAG16 (ENSNVIG00000009863) #24	IKZF2 (ENSNVIG00000009778) #25	ERBB4 (ENSNVIG00000009625) #26	ENSNVIG00000009597	CPS1 (ENSNVIG00000009449) #28	LANCL1 (ENSNVIG00000009403) #29	MYL1 (ENSNVIG00000009358) #31	ACADL (ENSNVIG00000009328) #32	KANSL1L (ENSNVIG00000009283) #34	ENSNVIG00000009250 #35	UNC80 (ENSNVIG00000009127) #36
Canidae	ANCESTRAL SPECIES	20	ENSGT00940000154044.a.b	ENSGT00940000155400.B	ENSGT00390000000539	ENSGT00940000155890	ENSGT00940000158542	ENSGT00940000167978	ENSGT00940000157608	ENSGT00940000158179	ENSGT00940000153239.A	ENSGT00390000015276.m	ENSGT00940000156882.i	ENSGT00390000008926	ENSGT00940000155126 #19	ENSGT00390000004553.u #20	ENSGT00940000157295 #21	ENSGT00940000156532 #22	ENSGT00720000108792.B #23	ENSGT00940000155053 #24	ENSGT00940000157137 #25	ENSGT00940000154695 #26	ENSGT00940000157192 #28	ENSGT00530000063186.b.b #29	ENSGT01030000234570.d.a #31	ENSGT00940000157652 #32	ENSGT00530000063688.a #34	ENSGT00390000001447 #35	ENSGT00640000091496 #36	ENSGT00940000156597.b #37	ENSGT00940000159094	ENSGT00940000156307.b	ENSGT00390000012547.b
Canis_lupus	DUPLICATION
Canis_lupus	ANCESTRAL SPECIES	32	ENSGT00940000154044.a.b	ENSGT00940000155400.B	ENSGT00390000000539	ENSGT00940000155890	ENSGT00940000158542	ENSGT00940000167978	ENSGT00940000157608	ENSGT00940000158179	ENSGT00940000153239.A	ENSGT00390000015276.m	ENSGT00940000156882.i.a	ENSGT00390000008926	ENSGT00940000155126 #19	ENSGT00390000004553.u #20	ENSGT00940000157295 #21	ENSGT00940000156532.m #22	ENSGT00720000108792.B #23	ENSGT00940000155053 #24	ENSGT00940000157137 #25	ENSGT00940000154695 #26	ENSGT01030000235022.a.b	ENSGT00940000157192 #28	ENSGT00530000063186.b.b #29	ENSGT01030000234570.d.a #31	ENSGT00940000157652 #32	ENSGT00530000063688.a #34	ENSGT00390000001447 #35	ENSGT00640000091496 #36	ENSGT00940000156597.b #37	ENSGT00940000159094	ENSGT00940000156307.b
Dog	MODERN SPECIES	30	RUFY4 (ENSCAFG00845026363)	TNS1 (ENSCAFG00845025209)	TNP1 (ENSCAFG00845025043)	IGFBP5 (ENSCAFG00845024936)	IGFBP2 (ENSCAFG00845024863)	RPL37A (ENSCAFG00845024724)	SMARCAL1 (ENSCAFG00845024403)	MARCHF4 (ENSCAFG00845024325)	XRCC5 (ENSCAFG00845023719)	TMEM169 (ENSCAFG00845023607)	PECR (ENSCAFG00845023539)	MREG (ENSCAFG00845023465)	FN1 (ENSCAFG00845021985) #19	ATIC (ENSCAFG00845021597) #20	ABCA12 (ENSCAFG00845020774) #21	ENSCAFG00845020407 #22	VWC2L (ENSCAFG00845020176) #23	SPAG16 (ENSCAFG00845020068) #24	IKZF2 (ENSCAFG00845019777) #25	ERBB4 (ENSCAFG00845018700) #26	ENSCAFG00845018409	ENSCAFG00845018381	LANCL1 (ENSCAFG00845018274) #29	CPS1 (ENSCAFG00845017752) #28	MYL1 (ENSCAFG00845017241) #31	ENSCAFG00845017145	ACADL (ENSCAFG00845017093) #32	KANSL1L (ENSCAFG00845016965) #34	RPE (ENSCAFG00845016841) #35	ENSCAFG00845026723	UNC80 (ENSCAFG00845024595) #36
Dingo	MODERN SPECIES	398	ENSCAFG00020027115	ENSCAFG00020027127	TNP1 (ENSCAFG00020027140)	IGFBP5 (ENSCAFG00020027142)	IGFBP2 (ENSCAFG00020027144)	ENSCAFG00020027145	SMARCAL1 (ENSCAFG00020027146)	MARCHF4 (ENSCAFG00020027147)	XRCC5 (ENSCAFG00020027148)	ENSCAFG00020027149	ENSCAFG00020027150	MREG (ENSCAFG00020027154)	FN1 (ENSCAFG00020027194) #19	ENSCAFG00020027231 #20	ABCA12 (ENSCAFG00020027288) #21	ENSCAFG00020027297 #22	VWC2L (ENSCAFG00020027301) #23	ENSCAFG00020027302 #24	IKZF2 (ENSCAFG00020027304) #25	ERBB4 (ENSCAFG00020027318) #26	ENSCAFG00020027327	CPS1 (ENSCAFG00020027329) #28	LANCL1 (ENSCAFG00020027334) #29	MYL1 (ENSCAFG00020027336) #31	ACADL (ENSCAFG00020027340) #32	KANSL1L (ENSCAFG00020027344) #34	ENSCAFG00020027348 #35	UNC80 (ENSCAFG00020027361) #36	MAP2 (ENSCAFG00020027372) #37	ENSCAFG00020027373	PTH2R (ENSCAFG00020027375)
Canis_lupus	ANCESTRAL SPECIES	8	ENSGT00940000162840.C	ENSGT00940000162524.A	ENSGT00940000165763	ENSGT00940000153130.a.a.a.c.b	ENSGT00900000140957.A.b	ENSGT00940000153130.a.b.a.b	ENSGT00950000184977	ENSGT00940000163717	ENSGT00900000140957.A.a.b	ENSGT00940000153073.b.b.b.b.o.c	ENSGT00940000163708	ENSGT00940000163052	ENSGT00940000153073.b.b.b.b.o.d	ENSGT00940000153130.a.a.b	ENSGT00940000163906	ENSGT00940000156532.n #22	ENSGT00900000140957.A.a.a.w.b	ENSGT00940000154455.b.i.a.a.b.a	ENSGT00940000154455.b.i.a.b.a	ENSGT00900000140957.A.a.a.w.a.b.a	ENSGT00900000140957.A.a.a.w.a.a.b.b	ENSGT00940000154455.b.j.b.a	ENSGT00940000154455.b.i.a.b.b	ENSGT00940000159469.a.a	ENSGT00900000140957.A.a.a.w.a.a.b.a	ENSGT00940000154455.b.j.a	ENSGT00900000140957.A.a.a.x.a	ENSGT00940000154455.b.i.b.a	ENSGT00900000140957.A.a.a.w.a.b.b	ENSGT00940000154455.b.i.a.a.a	ENSGT00900000140957.A.a.a.x.b
Dingo	MODERN SPECIES	161	ENSCAFG00020007919	TRAV34 (ENSCAFG00020007927)	ENSCAFG00020007960	ENSCAFG00020007962	TRAV29DV5 (ENSCAFG00020007963)	ENSCAFG00020007964	ENSCAFG00020007967	ENSCAFG00020007969	ENSCAFG00020007974	ENSCAFG00020007976	TRAV21 (ENSCAFG00020007979)	ENSCAFG00020007981	ENSCAFG00020007982	ENSCAFG00020007984	TRAV10 (ENSCAFG00020007986)	ENSCAFG00020007994 #22	ENSCAFG00020008001	ENSCAFG00020008009	ENSCAFG00020008019	ENSCAFG00020008021	ENSCAFG00020008024	ENSCAFG00020008036	ENSCAFG00020008043	ENSCAFG00020008046	ENSCAFG00020008056	ENSCAFG00020008061	ENSCAFG00020008064	ENSCAFG00020008066	ENSCAFG00020008072	ENSCAFG00020008080	ENSCAFG00020008083
Dog	MODERN SPECIES	36	ENSCAFG00845001612	ENSCAFG00845001603	ENSCAFG00845001593	TRAV34 (ENSCAFG00845001585)	TRAV26-2 (ENSCAFG00845001576)	ENSCAFG00845001567	TRAV29DV5 (ENSCAFG00845001559)	ENSCAFG00845001543	ENSCAFG00845001533	TRAV24 (ENSCAFG00845001524)	ENSCAFG00845001516	ENSCAFG00845001508	TRAV21 (ENSCAFG00845001499)	ENSCAFG00845001490	ENSCAFG00845001473	ENSCAFG00845023473 #22	ENSCAFG00845023410	ENSCAFG00845023380	ENSCAFG00845023334	ENSCAFG00845023303	ENSCAFG00845023257	ENSCAFG00845023233	ENSCAFG00845023209	ENSCAFG00845023134	ENSCAFG00845023113	ENSCAFG00845023083	ENSCAFG00845023042	ENSCAFG00845023022	ENSCAFG00845022989	ENSCAFG00845022956	ENSCAFG00845022920
Red fox	MODERN SPECIES	39	TNS1 (ENSVVUG00000007426)	TNP1 (ENSVVUG00000007592)	IGFBP5 (ENSVVUG00000007604)	IGFBP2 (ENSVVUG00000007623)	ENSVVUG00000007642	SMARCAL1 (ENSVVUG00000007658)	MARCH4 (ENSVVUG00000007709)	XRCC5 (ENSVVUG00000007761)	TMEM169 (ENSVVUG00000008962)	ENSVVUG00000008964	MREG (ENSVVUG00000008966)	ENSVVUG00000008967	FN1 (ENSVVUG00000008974) #19	ATIC (ENSVVUG00000008989) #20	ABCA12 (ENSVVUG00000009005) #21	BARD1 (ENSVVUG00000009080) #22	VWC2L (ENSVVUG00000009113) #23	ENSVVUG00000009126 #24	IKZF2 (ENSVVUG00000009142) #25	ERBB4 (ENSVVUG00000009194) #26	ENSVVUG00000009222	CPS1 (ENSVVUG00000009235) #28	LANCL1 (ENSVVUG00000009273) #29	ENSVVUG00000009278	MYL1 (ENSVVUG00000009295) #31	ACADL (ENSVVUG00000009345) #32	KANSL1L (ENSVVUG00000009477) #34	RPE (ENSVVUG00000009490) #35	UNC80 (ENSVVUG00000009630) #36	MAP2 (ENSVVUG00000009866) #37	PTH2R (ENSVVUG00000009949)
Felidae	ANCESTRAL SPECIES	15	ENSGT00940000154044.a.b	ENSGT00940000155400.B	ENSGT00390000000539	ENSGT00940000155890	ENSGT00940000158542	ENSGT00390000016988.a.b	ENSGT00940000157608	ENSGT00940000158179	ENSGT00940000153239.A	ENSGT00390000015276	ENSGT00940000156882	ENSGT00390000008926	ENSGT00940000155126 #19	ENSGT00390000004553.w #20	ENSGT00940000157295 #21	ENSGT00940000156532 #22	ENSGT00720000108792.B #23	ENSGT00940000155053 #24	ENSGT00940000157137 #25	ENSGT00940000154695 #26	ENSGT00940000157192 #28	ENSGT00530000063186.b.b #29	ENSGT01030000234570.d.a #31	ENSGT00940000157652 #32	ENSGT00530000063688.a #34	ENSGT00390000001447 #35	ENSGT00640000091496 #36	ENSGT00940000156597.b #37	ENSGT00940000158720.c.b.`b	ENSGT00940000159094	ENSGT00940000156307.b
Panthera	ANCESTRAL SPECIES	9	ENSGT00940000154044.a.b	ENSGT00940000155400.B	ENSGT00390000000539	ENSGT00940000155890	ENSGT00940000158542	ENSGT00390000016988.a.b	ENSGT00940000157608	ENSGT00940000158179	ENSGT00940000153239.A	ENSGT00390000015276	ENSGT00940000156882	ENSGT00390000008926	ENSGT00940000155126 #19	ENSGT00390000004553.w #20	ENSGT00940000157295 #21	ENSGT00940000156532 #22	ENSGT00720000108792.B #23	ENSGT00940000155053 #24	ENSGT00940000157137 #25	ENSGT00940000154695 #26	ENSGT00940000157192 #28	ENSGT00530000063186.b.b #29	ENSGT01030000234570.d.a #31	ENSGT00940000157652 #32	ENSGT00530000063688.a #34	ENSGT00390000001447 #35	ENSGT00640000091496 #36	ENSGT00940000156597.b #37	ENSGT00940000158720.c.b.`b	ENSGT00940000159094	ENSGT00940000156307.b
Panthera_a	ANCESTRAL SPECIES	6	ENSGT00940000154044.a.b	ENSGT00940000155400.B	ENSGT00390000000539	ENSGT00940000155890	ENSGT00940000158542	ENSGT00390000016988.a.b	ENSGT00940000157608	ENSGT00940000158179	ENSGT00940000153239.A	ENSGT00390000015276	ENSGT00940000156882	ENSGT00390000008926	ENSGT00940000155126 #19	ENSGT00390000004553.w #20	ENSGT00940000157295 #21	ENSGT00940000156532 #22	ENSGT00720000108792.B #23	ENSGT00940000155053 #24	ENSGT00940000157137 #25	ENSGT00940000154695 #26	ENSGT00940000157192 #28	ENSGT00530000063186.b.b #29	ENSGT01030000234570.d.a #31	ENSGT00940000157652 #32	ENSGT00530000063688.a #34	ENSGT00390000001447 #35	ENSGT00640000091496 #36	ENSGT00940000156597.b #37	ENSGT00940000159094	ENSGT00940000156307.b	ENSGT00390000012547.b
leopard	MODERN SPECIES	12	TNS1 (ENSPPRG00000016737)	TNP1 (ENSPPRG00000013133)	IGFBP5 (ENSPPRG00000013098)	IGFBP2 (ENSPPRG00000012975)	RPL37A (ENSPPRG00000012681)	SMARCAL1 (ENSPPRG00000012487)	MARCHF4 (ENSPPRG00000011970)	XRCC5 (ENSPPRG00000011769)	TMEM169 (ENSPPRG00000010457)	ENSPPRG00000010418	ENSPPRG00000010384	MREG (ENSPPRG00000010221)	FN1 (ENSPPRG00000009716) #19	ENSPPRG00000002551 #20	ABCA12 (ENSPPRG00000002284) #21	BARD1 (ENSPPRG00000000936) #22	VWC2L (ENSPPRG00000000428) #23	SPAG16 (ENSPPRG00000000338) #24	IKZF2 (ENSPPRG00000022962) #25	ERBB4 (ENSPPRG00000021619) #26	CPS1 (ENSPPRG00000017782) #28	LANCL1 (ENSPPRG00000014545) #29	MYL1 (ENSPPRG00000014175) #31	ACADL (ENSPPRG00000014114) #32	KANSL1L (ENSPPRG00000013126) #34	ENSPPRG00000012984 #35	UNC80 (ENSPPRG00000012259) #36	MAP2 (ENSPPRG00000010961) #37	ENSPPRG00000009415	PTH2R (ENSPPRG00000009093)	PIKFYVE (ENSPPRG00000008871)
lion	MODERN SPECIES	8	TNS1 (ENSPLOG00000021451)	ENSPLOG00000021740	TNP1 (ENSPLOG00000021749)	IGFBP5 (ENSPLOG00000021770)	IGFBP2 (ENSPLOG00000021792)	RPL37A (ENSPLOG00000021827)	SMARCAL1 (ENSPLOG00000021859)	MARCHF4 (ENSPLOG00000022004)	XRCC5 (ENSPLOG00000022030)	TMEM169 (ENSPLOG00000022080)	PECR (ENSPLOG00000022096)	MREG (ENSPLOG00000022108)	FN1 (ENSPLOG00000022449) #19	ATIC (ENSPLOG00000022715) #20	ABCA12 (ENSPLOG00000022719) #21	BARD1 (ENSPLOG00000022720) #22	ENSPLOG00000022721	VWC2L (ENSPLOG00000022722) #23	SPAG16 (ENSPLOG00000022723) #24	IKZF2 (ENSPLOG00000022726) #25	ERBB4 (ENSPLOG00000022728) #26	CPS1 (ENSPLOG00000022730) #28	LANCL1 (ENSPLOG00000022731) #29	MYL1 (ENSPLOG00000022732) #31	ACADL (ENSPLOG00000005365) #32	KANSL1L (ENSPLOG00000005446) #34	ENSPLOG00000005504 #35	UNC80 (ENSPLOG00000005686) #36	MAP2 (ENSPLOG00000006126) #37	ENSPLOG00000006284	ENSPLOG00000006368
Tiger	MODERN SPECIES	240	RUFY4 (ENSPTIG00000016982)	TNS1 (ENSPTIG00000004935)	TNP1 (ENSPTIG00000003475)	IGFBP5 (ENSPTIG00000001085)	IGFBP2 (ENSPTIG00000022009)	RPL37A (ENSPTIG00000021853)	SMARCAL1 (ENSPTIG00000020732)	MARCHF4 (ENSPTIG00000020170)	XRCC5 (ENSPTIG00000016510)	TMEM169 (ENSPTIG00000015999)	PECR (ENSPTIG00000015470)	MREG (ENSPTIG00000014793)	FN1 (ENSPTIG00000019902) #19	ATIC (ENSPTIG00000015356) #20	ABCA12 (ENSPTIG00000006592) #21	BARD1 (ENSPTIG00000002607) #22	VWC2L (ENSPTIG00000022118) #23	SPAG16 (ENSPTIG00000022030) #24	IKZF2 (ENSPTIG00000021209) #25	ERBB4 (ENSPTIG00000007031) #26	CPS1 (ENSPTIG00000013483) #28	LANCL1 (ENSPTIG00000012768) #29	MYL1 (ENSPTIG00000012214) #31	ACADL (ENSPTIG00000009876) #32	KANSL1L (ENSPTIG00000004021) #34	ENSPTIG00000020548 #35	UNC80 (ENSPTIG00000017745) #36	MAP2 (ENSPTIG00000011771) #37	PTH2R (ENSPTIG00000010836)
Cat	MODERN SPECIES	239	RUFY4 (ENSFCAG00000002367)	TNS1 (ENSFCAG00000001073)	TNP1 (ENSFCAG00000036860)	IGFBP5 (ENSFCAG00000021980)	IGFBP2 (ENSFCAG00000004465)	ENSFCAG00000037481	SMARCAL1 (ENSFCAG00000009377)	MARCHF4 (ENSFCAG00000009376)	XRCC5 (ENSFCAG00000019248)	TMEM169 (ENSFCAG00000038551)	PECR (ENSFCAG00000029466)	MREG (ENSFCAG00000042915)	FN1 (ENSFCAG00000009217) #19	ATIC (ENSFCAG00000009216) #20	ABCA12 (ENSFCAG00000009215) #21	BARD1 (ENSFCAG00000010312) #22	VWC2L (ENSFCAG00000015156) #23	ENSFCAG00000034149	ENSFCAG00000032010	SPAG16 (ENSFCAG00000015155) #24	ENSFCAG00000048148	IKZF2 (ENSFCAG00000036602) #25	ERBB4 (ENSFCAG00000027902) #26	CPS1 (ENSFCAG00000027460) #28	LANCL1 (ENSFCAG00000023129) #29	MYL1 (ENSFCAG00000036039) #31	ACADL (ENSFCAG00000024046) #32	KANSL1L (ENSFCAG00000027585) #34	ENSFCAG00000009135 #35	UNC80 (ENSFCAG00000031298) #36	MAP2 (ENSFCAG00000024249) #37
Eulipotyphla	ANCESTRAL SPECIES																	ENSGT00940000156532 #22
Hedgehog	MODERN SPECIES	3597																BARD1 (ENSEEUG00000005440) #22
Common shrew	MODERN SPECIES	2715																ENSSARG00000012409 #22
Atlantogenata	ANCESTRAL SPECIES	9	ENSGT00940000154044.a.b	ENSGT00940000155400.B	ENSGT00390000000539	ENSGT00940000155890	ENSGT00940000158542	ENSGT00390000016988.b	ENSGT00940000157608	ENSGT00940000158179	ENSGT00940000153239.A	ENSGT00390000015276	ENSGT00940000156882	ENSGT00390000008926	ENSGT00940000155126 #19	ENSGT00390000004553 #20	ENSGT00940000157295 #21	ENSGT00940000156532 #22	ENSGT00720000108792.B #23	ENSGT00940000155053 #24	ENSGT00940000157137 #25	ENSGT00940000154695 #26	ENSGT00940000157192 #28	ENSGT00530000063186.b.b #29	ENSGT01030000234570.d.a #31	ENSGT00940000157652 #32	ENSGT00530000063688.a #34	ENSGT00390000001447 #35	ENSGT00640000091496 #36	ENSGT00940000156597.b #37	ENSGT00940000159094	ENSGT00940000156307.b	ENSGT00390000012547.b
Afrotheria	ANCESTRAL SPECIES	1	ENSGT00940000154044.a.b	ENSGT00940000155400.B	ENSGT00390000000539	ENSGT00940000155890	ENSGT00940000158542	ENSGT00390000016988.b	ENSGT00940000157608	ENSGT00940000158179	ENSGT00940000153239.A	ENSGT00390000015276	ENSGT00940000156882	ENSGT00390000008926	ENSGT00940000155126 #19	ENSGT00390000004553 #20	ENSGT00940000157295 #21	ENSGT00940000156532 #22	ENSGT00720000108792.B #23	ENSGT00940000155053 #24	ENSGT00940000157137 #25	ENSGT00940000154695 #26	ENSGT00940000157192 #28	ENSGT00530000063186.b.b #29	ENSGT01030000234570.d.a #31	ENSGT00940000157652 #32	ENSGT00530000063688.a #34	ENSGT00390000001447 #35	ENSGT00640000091496 #36	ENSGT00940000156597.b #37	ENSGT00940000159094	ENSGT00940000156307.b	ENSGT00390000012547.b
Afrotheria_a	ANCESTRAL SPECIES	1	ENSGT00940000154044.a.b	ENSGT00940000155400.B	ENSGT00390000000539	ENSGT00940000155890	ENSGT00940000158542	ENSGT00390000016988.b	ENSGT00940000157608	ENSGT00940000158179	ENSGT00940000153239.A	ENSGT00390000015276	ENSGT00940000156882	ENSGT00390000008926	ENSGT00940000155126 #19	ENSGT00390000004553 #20	ENSGT00940000157295 #21	ENSGT00940000156532 #22	ENSGT00720000108792.B #23	ENSGT00940000155053 #24	ENSGT00940000157137 #25	ENSGT00940000154695 #26	ENSGT00940000157192 #28	ENSGT00530000063186.b.b #29	ENSGT01030000234570.d.a #31	ENSGT00940000157652 #32	ENSGT00530000063688.a #34	ENSGT00390000001447 #35	ENSGT00640000091496 #36	ENSGT00940000156597.b #37	ENSGT00940000159094	ENSGT00940000156307.b	ENSGT00390000012547.b
Elephant	MODERN SPECIES	301	TNS1 (ENSLAFG00000000579)	TNP1 (ENSLAFG00000032172)	ENSLAFG00000030968	IGFBP5 (ENSLAFG00000027482)	IGFBP2 (ENSLAFG00000028294)	ENSLAFG00000006849	SMARCAL1 (ENSLAFG00000006842)	MARCHF4 (ENSLAFG00000010549)	XRCC5 (ENSLAFG00000010544)	TMEM169 (ENSLAFG00000010543)	PECR (ENSLAFG00000001417)	MREG (ENSLAFG00000018636)	FN1 (ENSLAFG00000016024) #19	ATIC (ENSLAFG00000002520) #20	ABCA12 (ENSLAFG00000005158) #21	BARD1 (ENSLAFG00000000546) #22	VWC2L (ENSLAFG00000010991) #23	ENSLAFG00000010985 #24	IKZF2 (ENSLAFG00000008236) #25	ENSLAFG00000032609 #26	ENSLAFG00000030559 #26	ENSLAFG00000006617 #26	CPS1 (ENSLAFG00000005505) #28	LANCL1 (ENSLAFG00000018697) #29	MYL1 (ENSLAFG00000005451) #31	ACADL (ENSLAFG00000015099) #32	KANSL1L (ENSLAFG00000014134) #34	ENSLAFG00000014127 #35	UNC80 (ENSLAFG00000008065) #36	MAP2 (ENSLAFG00000027965) #37	PTH2R (ENSLAFG00000009988)
Hyrax	MODERN SPECIES	2836																BARD1 (ENSPCAG00000015190) #22
Tenrec	MODERN SPECIES	3459																BARD1 (ENSETEG00000009948) #22
Xenarthra	ANCESTRAL SPECIES	462										ENSGT00390000015276	ENSGT00940000156882	ENSGT00390000008926	ENSGT00940000155126 #19	ENSGT00390000004553 #20	ENSGT00940000157295 #21	ENSGT00940000156532 #22	ENSGT00720000108792.B #23	ENSGT00940000155053 #24	ENSGT00940000157137 #25
Sloth	MODERN SPECIES	3157																BARD1 (ENSCHOG00000005543) #22
Armadillo	MODERN SPECIES	4534										TMEM169 (ENSDNOG00000017604)	PECR (ENSDNOG00000011608)	ENSDNOG00000031149	FN1 (ENSDNOG00000000626) #19	ATIC (ENSDNOG00000006098) #20	ABCA12 (ENSDNOG00000010676) #21	BARD1 (ENSDNOG00000037382) #22	ENSDNOG00000047897	VWC2L (ENSDNOG00000009235) #23	ENSDNOG00000030608 #24	ENSDNOG00000041597	ENSDNOG00000033836 #24	ENSDNOG00000039194 #25
Marsupialia	ANCESTRAL SPECIES	8	ENSGT00940000154044.a.b	ENSGT00940000155400.B	ENSGT00390000000539	ENSGT00940000155890	ENSGT00940000158542	ENSGT00390000016988.a.b	ENSGT00940000157608	ENSGT00940000158179	ENSGT00940000153239.A	ENSGT00390000015276	ENSGT00940000156882	ENSGT00390000008926	ENSGT00940000155126 #19	ENSGT00390000004553 #20	ENSGT00940000157295 #21	ENSGT00940000156532 #22	ENSGT00720000108792.B #23	ENSGT00940000155053 #24	ENSGT00940000157137 #25	ENSGT00940000154695 #26	ENSGT00940000157192 #28	ENSGT00530000063186.b.b #29	ENSGT01030000234570.d.a #31	ENSGT00940000157652 #32	ENSGT00530000063688.a #34	ENSGT00390000001447 #35	ENSGT00640000091496 #36	ENSGT00940000156597.b #37	ENSGT00940000159094	ENSGT00940000156307.b	ENSGT00390000012547.b
Marsupialia_b	ANCESTRAL SPECIES	7	ENSGT00940000154044.a.b	ENSGT00940000155400.B	ENSGT00390000000539	ENSGT00940000155890	ENSGT00940000158542	ENSGT00390000016988.a.b	ENSGT00940000157608	ENSGT00940000158179	ENSGT00940000153239.A	ENSGT00390000015276	ENSGT00940000156882	ENSGT00390000008926	ENSGT00940000155126 #19	ENSGT00390000004553 #20	ENSGT00940000157295 #21	ENSGT00940000156532 #22	ENSGT00720000108792.B #23	ENSGT00940000155053 #24	ENSGT00940000157137 #25	ENSGT00940000154695 #26	ENSGT00940000157192 #28	ENSGT00530000063186.b.b #29	ENSGT01030000234570.d.a #31	ENSGT00940000157652 #32	ENSGT00530000063688.a #34	ENSGT00390000001447 #35	ENSGT00640000091496 #36	ENSGT00940000156597.b #37	ENSGT00940000159094	ENSGT00940000156307.b	ENSGT00390000012547.b
Diprotodontia	ANCESTRAL SPECIES	31	ENSGT00940000155400.B	ENSGT00390000000539	ENSGT00940000155890	ENSGT00940000158542	ENSGT00390000016988.a.b	ENSGT00940000157608	ENSGT00940000158179	ENSGT00940000153239.A	ENSGT00940000156882.a	ENSGT00390000015276	ENSGT00940000156882.b	ENSGT00390000008926	ENSGT00940000155126 #19	ENSGT00390000004553 #20	ENSGT00940000157295 #21	ENSGT00940000156532 #22	ENSGT00720000108792.B #23	ENSGT00940000155053 #24	ENSGT00940000157137 #25	ENSGT00940000154695 #26	ENSGT00940000157192 #28	ENSGT00530000063186.b.b #29	ENSGT01030000234570.d.a #31	ENSGT00940000157652 #32	ENSGT00530000063688.a #34	ENSGT00390000001447 #35	ENSGT00640000091496 #36	ENSGT00940000156597.b #37	ENSGT00940000159094	ENSGT00940000156307.b	ENSGT00390000012547.b
Diprotodontia_a	ANCESTRAL SPECIES	30	ENSGT00940000155400.B	ENSGT00390000000539	ENSGT00940000155890	ENSGT00940000158542	ENSGT00390000016988.a.b	ENSGT00940000157608	ENSGT00940000158179	ENSGT00940000153239.A	ENSGT00940000156882.a	ENSGT00390000015276	ENSGT00940000156882.b	ENSGT00390000008926	ENSGT00940000155126 #19	ENSGT00390000004553 #20	ENSGT00940000157295 #21	ENSGT00940000156532 #22	ENSGT00720000108792.B #23	ENSGT00940000155053 #24	ENSGT00940000157137 #25	ENSGT00940000154695 #26	ENSGT00940000157192 #28	ENSGT00530000063186.b.b #29	ENSGT01030000234570.d.a #31	ENSGT00940000157652 #32	ENSGT00530000063688.a #34	ENSGT00390000001447 #35	ENSGT00640000091496 #36	ENSGT00940000156597.b #37	ENSGT00940000159094	ENSGT00940000156307.b	ENSGT00390000012547.b
Common wonbat	MODERN SPECIES	1038	ENSVURG00010002744	ENSVURG00010002759	IGFBP5 (ENSVURG00010002789)	IGFBP2 (ENSVURG00010002805)	RPL37A (ENSVURG00010002818)	SMARCAL1 (ENSVURG00010002845)	MARCHF4 (ENSVURG00010002862)	XRCC5 (ENSVURG00010002898)	ENSVURG00010002961	TMEM169 (ENSVURG00010003001)	ENSVURG00010003025	MREG (ENSVURG00010003034)	FN1 (ENSVURG00010003070) #19	ATIC (ENSVURG00010003185) #20	ABCA12 (ENSVURG00010003222) #21	BARD1 (ENSVURG00010003327) #22	VWC2L (ENSVURG00010003348) #23	ENSVURG00010003372 #24	ENSVURG00010003388	IKZF2 (ENSVURG00010003422) #25	ERBB4 (ENSVURG00010003549) #26	CPS1 (ENSVURG00010003725) #28	LANCL1 (ENSVURG00010003810) #29	MYL1 (ENSVURG00010003828) #31	ACADL (ENSVURG00010003860) #32	KANSL1L (ENSVURG00010003874) #34	ENSVURG00010003917 #35	UNC80 (ENSVURG00010003993) #36	ENSVURG00010004218 #37	PTH2R (ENSVURG00010004279)	ENSVURG00010004334
koala	MODERN SPECIES	98	TNS1 (ENSPCIG00000021440)	TNP1 (ENSPCIG00000029428)	IGFBP5 (ENSPCIG00000029430)	ENSPCIG00000031078	RPL37A (ENSPCIG00000016481)	SMARCAL1 (ENSPCIG00000022514)	MARCHF4 (ENSPCIG00000022525)	XRCC5 (ENSPCIG00000007362)	ENSPCIG00000008673	TMEM169 (ENSPCIG00000035665)	ENSPCIG00000022540	MREG (ENSPCIG00000022546)	FN1 (ENSPCIG00000022559) #19	ATIC (ENSPCIG00000008126) #20	ABCA12 (ENSPCIG00000008985) #21	BARD1 (ENSPCIG00000022589) #22	VWC2L (ENSPCIG00000022591) #23
Tasmanian devil	MODERN SPECIES	2	TNP1 (ENSSHAG00000023054)	IGFBP5 (ENSSHAG00000028603)	IGFBP2 (ENSSHAG00000012420)	RPL37A (ENSSHAG00000013417)	SMARCAL1 (ENSSHAG00000013538)	MARCHF4 (ENSSHAG00000014010)	XRCC5 (ENSSHAG00000014688)	ENSSHAG00000015328	TMEM169 (ENSSHAG00000000555)	ENSSHAG00000001503	MREG (ENSSHAG00000026386)	FN1 (ENSSHAG00000009319) #19	ATIC (ENSSHAG00000010108) #20	ENSSHAG00000022770	ABCA12 (ENSSHAG00000011632) #21	BARD1 (ENSSHAG00000012998) #22	VWC2L (ENSSHAG00000014665) #23	ENSSHAG00000025155 #24	ENSSHAG00000004079 #24	IKZF2 (ENSSHAG00000001687) #25	ERBB4 (ENSSHAG00000014078) #26	ENSSHAG00000025581	CPS1 (ENSSHAG00000017472) #28	LANCL1 (ENSSHAG00000021780) #29	MYL1 (ENSSHAG00000017951) #31	ACADL (ENSSHAG00000024844) #32	KANSL1L (ENSSHAG00000001897) #34	ENSSHAG00000025167 #35	UNC80 (ENSSHAG00000029699) #36	MAP2 (ENSSHAG00000008479) #37	ENSSHAG00000003999
Opossum	MODERN SPECIES	6	ENSMODG00000038409	ENSMODG00000015536	IGFBP2 (ENSMODG00000015540)	RPL37A (ENSMODG00000039748)	SMARCAL1 (ENSMODG00000015544)	MARCHF4 (ENSMODG00000015546)	XRCC5 (ENSMODG00000015556)	PECR (ENSMODG00000015562)	ENSMODG00000029452	TMEM169 (ENSMODG00000037001)	MREG (ENSMODG00000015571)	ENSMODG00000028517	FN1 (ENSMODG00000015605) #19	ATIC (ENSMODG00000015612) #20	ABCA12 (ENSMODG00000015628) #21	BARD1 (ENSMODG00000015631) #22	VWC2L (ENSMODG00000015633) #23	ENSMODG00000042235 #24	ENSMODG00000008370	ENSMODG00000048388	ENSMODG00000015663	ENSMODG00000025486 #24	IKZF2 (ENSMODG00000015683) #25	ERBB4 (ENSMODG00000015755) #26	ENSMODG00000028496	CPS1 (ENSMODG00000015793) #28	LANCL1 (ENSMODG00000015804) #29	MYL1 (ENSMODG00000015807) #31	ACADL (ENSMODG00000015819) #32	KANSL1L (ENSMODG00000015823) #34	ENSMODG00000015827 #35
Platypus	MODERN SPECIES	18	PIKFYVE (ENSOANG00000008007)	MAP2 (ENSOANG00000007871) #37	UNC80 (ENSOANG00000028875) #36	ENSOANG00000041439 #35	KANSL1L (ENSOANG00000000302) #34	ACADL (ENSOANG00000013488) #32	MYL1 (ENSOANG00000006278) #31	LANCL1 (ENSOANG00000011057) #29	CPS1 (ENSOANG00000011059) #28	ERBB4 (ENSOANG00000007021) #26	ENSOANG00000015675	MREG (ENSOANG00000036014)	FN1 (ENSOANG00000006836) #19	ATIC (ENSOANG00000005769) #20	ABCA12 (ENSOANG00000012250) #21	BARD1 (ENSOANG00000048485) #22	VWC2L (ENSOANG00000012633) #23	ENSOANG00000050142 #24	ENSOANG00000029131 #24	IKZF2 (ENSOANG00000009330) #25	SH3BP4 (ENSOANG00000012552)	AGAP1 (ENSOANG00000013415)	GBX2 (ENSOANG00000039901)	ASB18 (ENSOANG00000002384)	ACKR3 (ENSOANG00000003999)	COPS8 (ENSOANG00000047446)	COL6A3 (ENSOANG00000011917)	ENSOANG00000001294	ENSOANG00000014727	RAB17 (ENSOANG00000011498)	ENSOANG00000011499
Sauria	ANCESTRAL SPECIES	32	ENSGT00940000156462.C	ENSGT00940000156462.B	ENSGT00950000183138.a.b	ENSGT00390000005489.a	ENSGT00940000161839	ENSGT00530000063564.b	ENSGT00940000165690	ENSGT00390000016508	ENSGT00940000159224	ENSGT00940000154349	ENSGT00940000163794	ENSGT00390000008926	ENSGT00940000155126 #19	ENSGT00390000004553 #20	ENSGT00940000157295 #21	ENSGT00940000156532 #22	ENSGT00720000108792.B #23	ENSGT00940000155053 #24	ENSGT00940000157137 #25	ENSGT00940000154695 #26	ENSGT00940000157192 #28	ENSGT00530000063186.b.b #29	ENSGT01030000234570.d.a #31	ENSGT00940000157652 #32	ENSGT00530000063688.a #34	ENSGT00390000001447 #35	ENSGT01030000235330	ENSGT00640000091496 #36	ENSGT00940000156597.b #37	ENSGT00940000159094	ENSGT00940000156307.b
Archelosauria	ANCESTRAL SPECIES	8	ENSGT00940000156462.C	ENSGT00940000156462.B	ENSGT00950000183138.a.b	ENSGT00390000005489.a	ENSGT00940000161839	ENSGT00530000063564.b	ENSGT00940000165690	ENSGT00390000016508	ENSGT00940000159224	ENSGT00940000154349	ENSGT00940000163794	ENSGT00390000008926	ENSGT00940000155126 #19	ENSGT00390000004553 #20	ENSGT00940000157295 #21	ENSGT00940000156532 #22	ENSGT00720000108792.B #23	ENSGT00940000155053 #24	ENSGT00940000157137 #25	ENSGT00940000154695 #26	ENSGT00940000157192 #28	ENSGT00960000189051	ENSGT00530000063186.b.b #29	ENSGT01030000234570.d.a #31	ENSGT00940000157652 #32	ENSGT00530000063688.a #34	ENSGT00390000001447 #35	ENSGT01030000235330	ENSGT00640000091496 #36	ENSGT00940000156597.b #37	ENSGT00940000159094
Archosauria	ANCESTRAL SPECIES	6	ENSGT01090000260051.b.b	ENSGT00390000000977	ENSGT00940000156462.C	ENSGT00950000183138.a.b	ENSGT00390000005489.a	ENSGT00940000161839	ENSGT00530000063564.b	ENSGT00940000165690	ENSGT00940000159224	ENSGT00940000154349	ENSGT00940000163794	ENSGT00390000008926	ENSGT00940000155126 #19	ENSGT00390000004553 #20	ENSGT00940000157295 #21	ENSGT00940000156532 #22	ENSGT00720000108792.B #23	ENSGT00940000155053 #24	ENSGT00940000157137 #25	ENSGT00940000154695 #26	ENSGT00940000157192 #28	ENSGT00960000189051	ENSGT00530000063186.b.b #29	ENSGT01030000234570.d.a #31	ENSGT00940000157652 #32	ENSGT00530000063688.a #34	ENSGT00390000001447 #35	ENSGT01030000235330	ENSGT00640000091496 #36	ENSGT00940000156597.b #37	ENSGT00940000159094
Aves	ANCESTRAL SPECIES	8	ENSGT01090000260051.b.b	ENSGT00390000000977	ENSGT00940000156462.C	ENSGT00950000183138.a.b	ENSGT00390000005489.a	ENSGT00940000161839	ENSGT00530000063564.b	ENSGT00940000165690	ENSGT00940000159224	ENSGT00940000154349	ENSGT00940000163794	ENSGT00390000008926	ENSGT00940000155126 #19	ENSGT00390000004553 #20	ENSGT00940000157295 #21	ENSGT00940000156532 #22	ENSGT00720000108792.B #23	ENSGT00940000155053 #24	ENSGT00940000157137 #25	ENSGT00940000154695 #26	ENSGT00940000157192 #28	ENSGT00960000189051	ENSGT00530000063186.b.b #29	ENSGT01030000234570.d.a #31	ENSGT00940000157652 #32	ENSGT00530000063688.a #34	ENSGT00390000001447 #35	ENSGT00640000091496 #36	ENSGT00940000156597.b #37	ENSGT00940000159094	ENSGT00940000156307.b
Neognathae	ANCESTRAL SPECIES	6	ENSGT00390000000977	ENSGT00940000156462.C	ENSGT00950000183138.a.b	ENSGT00390000005489.a	ENSGT00940000161839	ENSGT00530000063564.b	ENSGT00940000165690	ENSGT00940000159224	ENSGT00940000154349	ENSGT00390000014310	ENSGT00940000163794	ENSGT00390000008926	ENSGT00940000155126 #19	ENSGT00390000004553 #20	ENSGT00940000157295 #21	ENSGT00940000156532 #22	ENSGT00720000108792.B #23	ENSGT00940000155053 #24	ENSGT00940000157137 #25	ENSGT00940000154695 #26	ENSGT00940000157192 #28	ENSGT00960000189051	ENSGT00530000063186.b.b #29	ENSGT01030000234570.d.a #31	ENSGT00940000157652 #32	ENSGT00530000063688.a #34	ENSGT00390000001447 #35	ENSGT00640000091496 #36	ENSGT00940000156597.b #37	ENSGT00940000160494	ENSGT00390000016619.a
Neognathae_b	ANCESTRAL SPECIES	7	ENSGT00390000000977	ENSGT00940000156462.C	ENSGT00950000183138.a.b	ENSGT00390000005489.a	ENSGT00940000161839	ENSGT00530000063564.b	ENSGT00940000165690	ENSGT00940000159224	ENSGT00940000154349	ENSGT00390000014310	ENSGT00940000163794	ENSGT00390000008926	ENSGT00940000155126 #19	ENSGT00390000004553 #20	ENSGT00940000157295 #21	ENSGT00940000156532 #22	ENSGT00720000108792.B #23	ENSGT00940000155053 #24	ENSGT00940000157137 #25	ENSGT00940000154695 #26	ENSGT00940000157192 #28	ENSGT00960000189051	ENSGT00530000063186.b.b #29	ENSGT01030000234570.d.a #31	ENSGT00940000157652 #32	ENSGT00530000063688.a #34	ENSGT00390000001447 #35	ENSGT00640000091496 #36	ENSGT00940000156597.b #37	ENSGT00940000160494	ENSGT00390000016619.a
Passeriformes	ANCESTRAL SPECIES	6	ENSGT00940000160596.a.a.b	ENSGT00940000156462.C	ENSGT00950000183138.a.b	ENSGT00390000005489.a	ENSGT00940000161839	ENSGT00530000063564.b	ENSGT00940000165690	ENSGT00940000159224	ENSGT00940000154349	ENSGT00390000014310	ENSGT00940000163794	ENSGT00390000008926	ENSGT00940000155126 #19	ENSGT00390000004553 #20	ENSGT00940000157295 #21	ENSGT00940000156532 #22	ENSGT00720000108792.B #23	ENSGT00940000155053 #24	ENSGT00940000157137 #25	ENSGT00940000154695 #26	ENSGT00940000157192 #28	ENSGT00960000189051	ENSGT00530000063186.b.b #29	ENSGT01030000234570.d.a #31	ENSGT00940000157652 #32	ENSGT00530000063688.a #34	ENSGT00390000001447 #35	ENSGT00640000091496 #36	ENSGT00940000156597.b #37	ENSGT00940000160494	ENSGT00390000016619.a
Passeriformes_d	ANCESTRAL SPECIES	8	ENSGT00940000156462.C	ENSGT00950000183138.a.b	ENSGT00390000005489.a	ENSGT00940000161839	ENSGT00530000063564.b	ENSGT00940000165690	ENSGT00940000159224	ENSGT00940000154349	ENSGT00960000189419	ENSGT00390000014310	ENSGT00940000163794	ENSGT00390000008926	ENSGT00940000155126 #19	ENSGT00390000004553 #20	ENSGT00940000157295 #21	ENSGT00940000156532 #22	ENSGT00720000108792.B #23	ENSGT00940000155053 #24	ENSGT00940000157137 #25	ENSGT00940000154695 #26	ENSGT00940000157192 #28	ENSGT00960000189051	ENSGT00530000063186.b.b #29	ENSGT01030000234570.d.a #31	ENSGT00940000157652 #32	ENSGT00530000063688.a #34	ENSGT00390000001447 #35	ENSGT00640000091496 #36	ENSGT00940000156597.b #37	ENSGT00940000160494	ENSGT00390000016619.a
Passeriformes_g	ANCESTRAL SPECIES	9	ENSGT00940000156462.C	ENSGT00950000183138.a.b	ENSGT00390000005489.a	ENSGT00940000161839	ENSGT00530000063564.b	ENSGT00940000177452	ENSGT00940000159224	ENSGT00940000154349	ENSGT00960000189419	ENSGT00390000014310	ENSGT00940000163794	ENSGT00390000008926	ENSGT00940000155126 #19	ENSGT00390000004553 #20	ENSGT00940000157295 #21	ENSGT00940000156532 #22	ENSGT00720000108792.B #23	ENSGT00940000155053 #24	ENSGT00940000157137 #25	ENSGT00940000154695 #26	ENSGT00940000157192 #28	ENSGT00960000189051	ENSGT00530000063186.b.b #29	ENSGT01030000234570.d.a #31	ENSGT00940000157652 #32	ENSGT00530000063688.a #34	ENSGT00390000001447 #35	ENSGT00640000091496 #36	ENSGT00940000156597.b #37	ENSGT00940000160494	ENSGT00390000016619.a
Medium ground finch	DUPLICATION
Medium ground finch	MODERN SPECIES	210				COL6A3 (ENSGFOG00000012948)	MLPH (ENSGFOG00000012976)	ENSGFOG00000012982	RAB17 (ENSGFOG00000012985)	LRRFIP1 (ENSGFOG00000012997)	UBE2F (ENSGFOG00000013028)	ENSGFOG00000013036	ENSGFOG00000013046	MREG (ENSGFOG00000013048)	FN1 (ENSGFOG00000013058) #19	ATIC (ENSGFOG00000013117) #20	ABCA12 (ENSGFOG00000013179) #21	ENSGFOG00000013222 #22	ENSGFOG00000013224 #22	VWC2L (ENSGFOG00000013225) #23	SPAG16 (ENSGFOG00000013227) #24
Medium ground finch	MODERN SPECIES	210			COL6A3 (ENSGFOG00000012948)	MLPH (ENSGFOG00000012976)	ENSGFOG00000012982	RAB17 (ENSGFOG00000012985)	LRRFIP1 (ENSGFOG00000012997)	UBE2F (ENSGFOG00000013028)	ENSGFOG00000013036	ENSGFOG00000013046	MREG (ENSGFOG00000013048)	FN1 (ENSGFOG00000013058) #19	ATIC (ENSGFOG00000013117) #20	ABCA12 (ENSGFOG00000013179) #21	ENSGFOG00000013222 #22	ENSGFOG00000013224 #22	VWC2L (ENSGFOG00000013225) #23	SPAG16 (ENSGFOG00000013227) #24
Passeroidea	ANCESTRAL SPECIES	8	ENSGT00940000160596.a.a.b.a	ENSGT00940000156462.C	ENSGT00950000183138.a.b	ENSGT00390000005489.a	ENSGT00940000161839	ENSGT00530000063564.b	ENSGT00940000177452	ENSGT00940000159224	ENSGT00940000154349	ENSGT00390000014310	ENSGT00940000163794	ENSGT00390000008926	ENSGT00940000155126 #19	ENSGT00390000004553 #20	ENSGT00940000157295 #21	ENSGT00940000156532 #22	ENSGT00720000108792.B #23	ENSGT00940000155053 #24	ENSGT00940000157137 #25	ENSGT00940000154695 #26	ENSGT00940000157192 #28	ENSGT00960000189051	ENSGT00530000063186.b.b #29	ENSGT01030000234570.d.a #31	ENSGT00940000157652 #32	ENSGT00530000063688.a #34	ENSGT00390000001447 #35	ENSGT00640000091496 #36	ENSGT00940000156597.b #37	ENSGT00940000160494	ENSGT00390000016619.a
Zebra finch	MODERN SPECIES	29	ASB1 (ENSTGUG00000023179)	TRAF3IP1 (ENSTGUG00000003177)	USP40 (ENSTGUG00000003153)	ENSTGUG00000029203	ENSTGUG00000029766	ENSTGUG00000018428	ENSTGUG00000020846	ENSTGUG00000003102	SH3BP4 (ENSTGUG00000003098)	ENSTGUG00000003884	SMC1A (ENSTGUG00000029662)	ENSTGUG00000020568	FN1 (ENSTGUG00000002978) #19	ATIC (ENSTGUG00000002942) #20	ABCA12 (ENSTGUG00000002904) #21	BARD1 (ENSTGUG00000002894) #22	VWC2L (ENSTGUG00000002893) #23	SPAG16 (ENSTGUG00000002887) #24	IKZF2 (ENSTGUG00000002874) #25	ENSTGUG00000020929
Common canary	MODERN SPECIES	8	COPS8 (ENSSCAG00000008963)	COL6A3 (ENSSCAG00000008871)	MLPH (ENSSCAG00000008835)	PRLH (ENSSCAG00000008829)	RAB17 (ENSSCAG00000008822)	ENSSCAG00000008808	ENSSCAG00000008802	RAMP1 (ENSSCAG00000008799)	UBE2F (ENSSCAG00000008788)	ENSSCAG00000008781	ENSSCAG00000008776	MREG (ENSSCAG00000008744)	FN1 (ENSSCAG00000005638) #19	ATIC (ENSSCAG00000004622) #20	ABCA12 (ENSSCAG00000004519) #21	BARD1 (ENSSCAG00000004510) #22	VWC2L (ENSSCAG00000004500) #23	ENSSCAG00000004494 #24	ENSSCAG00000004487 #24	IKZF2 (ENSSCAG00000004479) #25	ERBB4 (ENSSCAG00000004444) #26	CPS1 (ENSSCAG00000004414) #28	ENSSCAG00000004409	LANCL1 (ENSSCAG00000004404) #29	MYL1 (ENSSCAG00000004398) #31	ACADL (ENSSCAG00000004392) #32	KANSL1L (ENSSCAG00000004376) #34	ENSSCAG00000004371 #35	UNC80 (ENSSCAG00000004263) #36	ENSSCAG00000004229 ##37	ENSSCAG00000004208 #37
Flycatcher	MODERN SPECIES	26	COPS8 (ENSFALG00000026238)	COL6A3 (ENSFALG00000012704)	MLPH (ENSFALG00000012767)	PRLH (ENSFALG00000027013)	RAB17 (ENSFALG00000012783)	LRRFIP1 (ENSFALG00000028055)	ENSFALG00000023851	RAMP1 (ENSFALG00000025699)	ENSFALG00000012804	ENSFALG00000012817	ENSFALG00000012826	MREG (ENSFALG00000012834)	FN1 (ENSFALG00000012845) #19	ATIC (ENSFALG00000012874) #20	ABCA12 (ENSFALG00000012901) #21	BARD1 (ENSFALG00000012920) #22	VWC2L (ENSFALG00000012931) #23	SPAG16 (ENSFALG00000012936) #24	IKZF2 (ENSFALG00000012948) #25	ERBB4 (ENSFALG00000012969) #26	CPS1 (ENSFALG00000013028) #28	ENSFALG00000027439	LANCL1 (ENSFALG00000013076) #29	MYL1 (ENSFALG00000013083) #31	ACADL (ENSFALG00000013095) #32	KANSL1L (ENSFALG00000013107) #34	ENSFALG00000013112 #35	UNC80 (ENSFALG00000013122) #36	MAP2 (ENSFALG00000024297) #37	FRZB (ENSFALG00000013151)	NCKAP1 (ENSFALG00000013164)
Great tit	MODERN SPECIES	27	COL6A3 (ENSPMJG00000006699)	MLPH (ENSPMJG00000006731)	PRLH (ENSPMJG00000006757)	RAB17 (ENSPMJG00000006759)	LRRFIP1 (ENSPMJG00000006762)	ENSPMJG00000006782	RAMP1 (ENSPMJG00000006785)	UBE2F (ENSPMJG00000006786)	ENSPMJG00000006792	ENSPMJG00000006799	MREG (ENSPMJG00000006864)	FN1 (ENSPMJG00000006873) #19	ATIC (ENSPMJG00000006902) #20	ENSPMJG00000006908	ABCA12 (ENSPMJG00000006911) #21	BARD1 (ENSPMJG00000006924) #22	VWC2L (ENSPMJG00000006927) #23	SPAG16 (ENSPMJG00000006964) #24	IKZF2 (ENSPMJG00000006973) #25	ENSPMJG00000006993	ERBB4 (ENSPMJG00000007008) #26	CPS1 (ENSPMJG00000007044) #28	LANCL1 (ENSPMJG00000007791) #29	MYL1 (ENSPMJG00000007793) #31	ACADL (ENSPMJG00000007795) #32	KANSL1L (ENSPMJG00000007796) #34	ENSPMJG00000007800 #35	UNC80 (ENSPMJG00000007818) #36	MAP2 (ENSPMJG00000007838) #37	FRZB (ENSPMJG00000007853)	NCKAP1 (ENSPMJG00000007857)
Neognathae_c	ANCESTRAL SPECIES	9	ENSGT01090000260051.b.b	ENSGT00390000000977	ENSGT00940000156462.C	ENSGT00950000183138.a.b	ENSGT00390000005489.a	ENSGT00940000161839	ENSGT00530000063564.b	ENSGT00940000159224	ENSGT00940000154349	ENSGT00390000014310	ENSGT00940000163794	ENSGT00390000008926	ENSGT00940000155126 #19	ENSGT00390000004553 #20	ENSGT00940000157295 #21	ENSGT00940000156532 #22	ENSGT00720000108792.B #23	ENSGT00940000155053 #24	ENSGT00940000157137 #25	ENSGT00940000154695 #26	ENSGT00940000157192 #28	ENSGT00960000189051	ENSGT00530000063186.b.b #29	ENSGT01030000234570.d.a #31	ENSGT00940000157652 #32	ENSGT00530000063688.a #34	ENSGT00390000001447 #35	ENSGT00640000091496 #36	ENSGT00940000156597.b #37	ENSGT00940000160494	ENSGT00390000016619.a
Kakapo	DUPLICATION
Kakapo	MODERN SPECIES	22	ZNF804A (ENSSHBG00005020501)	NUP35 (ENSSHBG00005020510)	DUSP19 (ENSSHBG00005020518)	NCKAP1 (ENSSHBG00005020521)	FRZB (ENSSHBG00005020525)	RAMP1 (ENSSHBG00005020526)	UBE2F (ENSSHBG00005020530)	ENSSHBG00005020534	ENSSHBG00005000192	ENSSHBG00005000202	MREG (ENSSHBG00005000212)	FN1 (ENSSHBG00005000531) #19	ATIC (ENSSHBG00005000641) #20	ABCA12 (ENSSHBG00005000642) #21	ENSSHBG00005000643 #22	ENSSHBG00005000645 #22	VWC2L (ENSSHBG00005000646) #23	SPAG16 (ENSSHBG00005000647) #24	IKZF2 (ENSSHBG00005000648) #25	ENSSHBG00005020164	ENSSHBG00005020192	PAOX (ENSSHBG00005020246)	MTG1 (ENSSHBG00005020254)	ECHS1 (ENSSHBG00005020259)	ENSSHBG00005020262	ZNF511 (ENSSHBG00005020265)	ENSSHBG00005020269	ADAM8 (ENSSHBG00005020273)	ERLIN1 (ENSSHBG00005020279)	CHUK (ENSSHBG00005020303)	CWF19L1 (ENSSHBG00005020349)
Kakapo	MODERN SPECIES	22	ENSSHBG00005020497	ZNF804A (ENSSHBG00005020501)	NUP35 (ENSSHBG00005020510)	DUSP19 (ENSSHBG00005020518)	NCKAP1 (ENSSHBG00005020521)	FRZB (ENSSHBG00005020525)	RAMP1 (ENSSHBG00005020526)	UBE2F (ENSSHBG00005020530)	ENSSHBG00005020534	ENSSHBG00005000192	ENSSHBG00005000202	MREG (ENSSHBG00005000212)	FN1 (ENSSHBG00005000531) #19	ATIC (ENSSHBG00005000641) #20	ABCA12 (ENSSHBG00005000642) #21	ENSSHBG00005000643 #22	ENSSHBG00005000645 #22	VWC2L (ENSSHBG00005000646) #23	SPAG16 (ENSSHBG00005000647) #24	IKZF2 (ENSSHBG00005000648) #25	ENSSHBG00005020164	ENSSHBG00005020192	PAOX (ENSSHBG00005020246)	MTG1 (ENSSHBG00005020254)	ECHS1 (ENSSHBG00005020259)	ENSSHBG00005020262	ZNF511 (ENSSHBG00005020265)	ENSSHBG00005020269	ADAM8 (ENSSHBG00005020273)	ERLIN1 (ENSSHBG00005020279)	CHUK (ENSSHBG00005020303)
Golden eagle	MODERN SPECIES	22	COL6A3 (ENSACCG00020014569)	ENSACCG00020014628	MLPH (ENSACCG00020014641)	PRLH (ENSACCG00020014655)	RAB17 (ENSACCG00020014666)	LRRFIP1 (ENSACCG00020014774)	RAMP1 (ENSACCG00020014879)	UBE2F (ENSACCG00020014904)	ENSACCG00020014939	ENSACCG00020014957	MREG (ENSACCG00020014972)	ENSACCG00020015012 #19	ENSACCG00020015079 #19	ATIC (ENSACCG00020015119) #20	ABCA12 (ENSACCG00020015186) #21	BARD1 (ENSACCG00020015244) #22	VWC2L (ENSACCG00020015266) #23	SPAG16 (ENSACCG00020015279) #24	IKZF2 (ENSACCG00020015298) #25	ERBB4 (ENSACCG00020015334) #26	CPS1 (ENSACCG00020015419) #28	ENSACCG00020015465	LANCL1 (ENSACCG00020015474) #29	MYL1 (ENSACCG00020015555) #31	ACADL (ENSACCG00020015590) #32	KANSL1L (ENSACCG00020015606) #34	ENSACCG00020015621 #35	UNC80 (ENSACCG00020015792) #36	MAP2 (ENSACCG00020015943) #37	FRZB (ENSACCG00020015976)	NCKAP1 (ENSACCG00020016001)
Galloanserae	ANCESTRAL SPECIES	7	ENSGT00390000000977	ENSGT00940000156462.C	ENSGT00950000183138.a.b	ENSGT00390000005489.a	ENSGT00940000161839	ENSGT00530000063564.b	ENSGT00940000165690	ENSGT00940000159224	ENSGT00940000154349	ENSGT00390000014310	ENSGT00940000163794	ENSGT00390000008926	ENSGT00940000155126 #19	ENSGT00390000004553 #20	ENSGT00940000157295 #21	ENSGT00940000156532 #22	ENSGT00720000108792.B #23	ENSGT00940000155053 #24	ENSGT00940000157137 #25	ENSGT00940000154695 #26	ENSGT00940000157192 #28	ENSGT00960000189051	ENSGT00530000063186.b.b #29	ENSGT01030000234570.d.a #31	ENSGT00940000157652 #32	ENSGT00530000063688.a #34	ENSGT00390000001447 #35	ENSGT00640000091496 #36	ENSGT00940000156597.b #37	ENSGT00940000160494	ENSGT00390000016619.a
Anatidae	ANCESTRAL SPECIES	10	ENSGT00390000000977	ENSGT00940000156462.C	ENSGT00950000183138.a.b	ENSGT00390000005489.a	ENSGT00940000161839	ENSGT00530000063564.b	ENSGT00940000165690	ENSGT00940000159224	ENSGT00940000154349	ENSGT00390000014310	ENSGT00940000163794	ENSGT00390000008926	ENSGT00940000155126 #19	ENSGT00390000004553 #20	ENSGT00940000157295 #21	ENSGT00940000156532 #22	ENSGT00720000108792.B #23	ENSGT00940000155053 #24	ENSGT00940000157137 #25	ENSGT00940000154695 #26	ENSGT00940000157192 #28	ENSGT00960000189051	ENSGT00530000063186.b.b #29	ENSGT01030000234570.d.a #31	ENSGT00940000157652 #32	ENSGT00530000063688.a #34	ENSGT00390000001447 #35	ENSGT00640000091496 #36	ENSGT00940000156597.b #37	ENSGT00940000160494	ENSGT00390000016619.a
Pink-footed goose	MODERN SPECIES	18	COPS8 (ENSABRG00000022248)	COL6A3 (ENSABRG00000022232)	MLPH (ENSABRG00000022201)	PRLH (ENSABRG00000022194)	ENSABRG00000022192	RAB17 (ENSABRG00000022190)	LRRFIP1 (ENSABRG00000022185)	ENSABRG00000022183	RAMP1 (ENSABRG00000022182)	UBE2F (ENSABRG00000022177)	ENSABRG00000022171	MREG (ENSABRG00000022165)	FN1 (ENSABRG00000021857) #19	ATIC (ENSABRG00000021637) #20	ABCA12 (ENSABRG00000021521) #21	BARD1 (ENSABRG00000021511) #22	VWC2L (ENSABRG00000021509) #23	SPAG16 (ENSABRG00000021506) #24	IKZF2 (ENSABRG00000021503) #25	ERBB4 (ENSABRG00000020899) #26	CPS1 (ENSABRG00000020606) #28	LANCL1 (ENSABRG00000020550) #29	MYL1 (ENSABRG00000020537) #31	ACADL (ENSABRG00000020530) #32	KANSL1L (ENSABRG00000020507) #34	ENSABRG00000020485 #35	UNC80 (ENSABRG00000020422) #36	MAP2 (ENSABRG00000020231) #37	FRZB (ENSABRG00000020214)	NCKAP1 (ENSABRG00000020208)	DUSP19 (ENSABRG00000020205)
Duck	MODERN SPECIES	25	COPS8 (ENSAPLG00000016947)	COL6A3 (ENSAPLG00000005511)	MLPH (ENSAPLG00000005150)	PRLH (ENSAPLG00000023643)	RAB17 (ENSAPLG00000004880)	ENSAPLG00000004640	ENSAPLG00000024288	RAMP1 (ENSAPLG00000004363)	ENSAPLG00000004341	ENSAPLG00000012522	ENSAPLG00000012593	MREG (ENSAPLG00000012631)	FN1 (ENSAPLG00000012652) #19	ATIC (ENSAPLG00000014306) #20	ABCA12 (ENSAPLG00000014859) #21	BARD1 (ENSAPLG00000015564) #22	VWC2L (ENSAPLG00000015890) #23	SPAG16 (ENSAPLG00000015934) #24	IKZF2 (ENSAPLG00000001291) #25	ERBB4 (ENSAPLG00000001331) #26	ENSAPLG00000026809	CPS1 (ENSAPLG00000002474) #28	ENSAPLG00000022497	LANCL1 (ENSAPLG00000004144) #29	MYL1 (ENSAPLG00000004615) #31	ACADL (ENSAPLG00000004832) #32	KANSL1L (ENSAPLG00000005351) #34	ENSAPLG00000005752 #35	UNC80 (ENSAPLG00000005783) #36	MAP2 (ENSAPLG00000022767) #37	NCKAP1 (ENSAPLG00000008045)
Phasianidae	ANCESTRAL SPECIES	8	ENSGT00390000000977	ENSGT00940000156462.C	ENSGT00950000183138.a.b	ENSGT00390000005489.a	ENSGT00940000161839	ENSGT00530000063564.b	ENSGT00940000177452	ENSGT00940000159224	ENSGT00940000154349	ENSGT00390000014310	ENSGT00940000163794	ENSGT00390000008926	ENSGT00940000155126 #19	ENSGT00390000004553 #20	ENSGT00940000157295 #21	ENSGT00940000156532 #22	ENSGT00720000108792.B #23	ENSGT00940000155053 #24	ENSGT00940000157137 #25	ENSGT00940000154695 #26	ENSGT00940000157192 #28	ENSGT00960000189051	ENSGT00530000063186.b.b #29	ENSGT01030000234570.d.a.l #31	ENSGT00940000157652 #32	ENSGT00530000063688.a #34	ENSGT00390000001447 #35	ENSGT00640000091496 #36	ENSGT00940000156597.b #37	ENSGT00940000160494	ENSGT00390000016619.a
Phasianidae_b	ANCESTRAL SPECIES	8	ENSGT00390000000977	ENSGT00940000156462.C	ENSGT00950000183138.a.b	ENSGT00950000185272	ENSGT00940000161839	ENSGT00530000063564.b	ENSGT00940000177452	ENSGT00940000159224	ENSGT00940000154349	ENSGT00390000014310	ENSGT00940000163794	ENSGT00390000008926	ENSGT00940000155126 #19	ENSGT00390000004553 #20	ENSGT00940000157295 #21	ENSGT00940000156532 #22	ENSGT00720000108792.B #23	ENSGT00940000157452.s.a.c.a.b	ENSGT00940000155053 #24	ENSGT00940000157137 #25	ENSGT00940000154695 #26	ENSGT00940000157192 #28	ENSGT00960000189051	ENSGT00530000063186.b.b #29	ENSGT01030000234570.d.a.l #31	ENSGT00940000157652 #32	ENSGT00530000063688.a #34	ENSGT00390000001447 #35	ENSGT00640000091496 #36	ENSGT00940000156597.b #37	ENSGT00940000160494
Chicken	MODERN SPECIES	36	COL6A3 (ENSGALG00010012362)	MLPH (ENSGALG00010012325)	PRLH (ENSGALG00010012236)	RAB17 (ENSGALG00010012215)	LRRFIP1 (ENSGALG00010012194)	ENSGALG00010012120	UBE2F (ENSGALG00010012100)	IFNL3 (ENSGALG00010012050)	ENSGALG00010012045	IFNL3A (ENSGALG00010012030)	ENSGALG00010012015	MREG (ENSGALG00010012007)	FN1 (ENSGALG00010011984) #19	ATIC (ENSGALG00010011965) #20	ABCA12 (ENSGALG00010011949) #21	BARD1 (ENSGALG00010011923) #22	VWC2L (ENSGALG00010011894) #23	ENSGALG00010015237	SPAG16 (ENSGALG00010011850) #24	IKZF2 (ENSGALG00010011720) #25	ERBB4 (ENSGALG00010011625) #26	LANCL1 (ENSGALG00010011539) #29	MYL1 (ENSGALG00010011505) #31	CPS1 (ENSGALG00010011469) #28	ACADL (ENSGALG00010011424) #32	KANSL1L (ENSGALG00010011412) #34	ENSGALG00010011374 #35	UNC80 (ENSGALG00010011357) #36	MAP2 (ENSGALG00010011321) #37	FRZB (ENSGALG00010011251)	NCKAP1 (ENSGALG00010011212)
Turkey	MODERN SPECIES	27	COL6A3 (ENSMGAG00000002889)	MLPH (ENSMGAG00000003050)	RAB17 (ENSMGAG00000003135)	PRLH (ENSMGAG00000018152)	ENSMGAG00000019302	ENSMGAG00000003145	ENSMGAG00000003218	RAMP1 (ENSMGAG00000003225)	ENSMGAG00000003229	ENSMGAG00000003250	ENSMGAG00000003269	MREG (ENSMGAG00000003298)	FN1 (ENSMGAG00000003306) #19	ATIC (ENSMGAG00000003456) #20	ABCA12 (ENSMGAG00000003510) #21	BARD1 (ENSMGAG00000003641) #22	VWC2L (ENSMGAG00000003667) #23	ENSMGAG00000003687 #24	ENSMGAG00000003672	ENSMGAG00000022263 #24	ENSMGAG00000003697 #25	ERBB4 (ENSMGAG00000003739) #26	CPS1 (ENSMGAG00000003847) #28	ENSMGAG00000019418	LANCL1 (ENSMGAG00000004068) #29	MYL1 (ENSMGAG00000004000) #31	ACADL (ENSMGAG00000004045) #32	KANSL1L (ENSMGAG00000004128) #34	ENSMGAG00000020115 #35	UNC80 (ENSMGAG00000004158) #36	ENSMGAG00000004244 #37
Japanese quail	MODERN SPECIES	25	MOB4 (ENSCJPG00005014148)	ENSCJPG00005014146	COL6A3 (ENSCJPG00005014145)	MLPH (ENSCJPG00005014101)	PRLH (ENSCJPG00005014089)	RAB17 (ENSCJPG00005014087)	LRRFIP1 (ENSCJPG00005014059)	RAMP1 (ENSCJPG00005014050)	UBE2F (ENSCJPG00005014047)	ENSCJPG00005014041	ENSCJPG00005014038	MREG (ENSCJPG00005014036)	FN1 (ENSCJPG00005014024) #19	ATIC (ENSCJPG00005014023) #20	ABCA12 (ENSCJPG00005014021) #21	BARD1 (ENSCJPG00005014019) #22	VWC2L (ENSCJPG00005014018) #23	SPAG16 (ENSCJPG00005014016) #24	IKZF2 (ENSCJPG00005014015) #25	ERBB4 (ENSCJPG00005014005) #26	CPS1 (ENSCJPG00005013844) #28	LANCL1 (ENSCJPG00005013843) #29	MYL1 (ENSCJPG00005013841) #31	ACADL (ENSCJPG00005013840) #32	KANSL1L (ENSCJPG00005013839) #34	ENSCJPG00005013838 #35	UNC80 (ENSCJPG00005013837) #36	ENSCJPG00005013836 #37	FRZB (ENSCJPG00005013834)	NCKAP1 (ENSCJPG00005013833)	DUSP19 (ENSCJPG00005013832)
African ostrich	MODERN SPECIES	1071															ABCA12 (ENSSCUG00000013363) #21	BARD1 (ENSSCUG00000013356) #22	VWC2L (ENSSCUG00000013355) #23	SPAG16 (ENSSCUG00000013354) #24	IKZF2 (ENSSCUG00000013350) #25	ERBB4 (ENSSCUG00000013317) #26	CPS1 (ENSSCUG00000013255) #28	LANCL1 (ENSSCUG00000013218) #29	MYL1 (ENSSCUG00000013213) #31	ACADL (ENSSCUG00000013211) #32	KANSL1L (ENSSCUG00000013205) #34	ENSSCUG00000013202 #35	UNC80 (ENSSCUG00000013197) #36	MAP2 (ENSSCUG00000013191) #37	PTH2R (ENSSCUG00000013187)	PIKFYVE (ENSSCUG00000013177)	IDH1 (ENSSCUG00000013175)
Australian saltwater crocodile	MODERN SPECIES	66	TRAF3IP1 (ENSCPRG00005005553)	ASB1 (ENSCPRG00005005514)	ENSCPRG00005005465	TWIST2 (ENSCPRG00005005461)	HDAC4 (ENSCPRG00005005400)	NDUFA10 (ENSCPRG00005005367)	ENSCPRG00005005355	ENSCPRG00005005331	ENSCPRG00005005317	ENSCPRG00005005314	ENSCPRG00005005309	MREG (ENSCPRG00005005306)	FN1 (ENSCPRG00005003637) #19	ATIC (ENSCPRG00005003393) #20	ABCA12 (ENSCPRG00005003342) #21	BARD1 (ENSCPRG00005003336) #22	VWC2L (ENSCPRG00005003332) #23	ENSCPRG00005003324	ENSCPRG00005003312 #24	ENSCPRG00005003294	IKZF2 (ENSCPRG00005003290) #25	ERBB4 (ENSCPRG00005003197) #26	CPS1 (ENSCPRG00005002612) #28	LANCL1 (ENSCPRG00005002510) #29	MYL1 (ENSCPRG00005002506) #31	ACADL (ENSCPRG00005002494) #32	KANSL1L (ENSCPRG00005002482) #34	ENSCPRG00005002478 #35	ENSCPRG00005002476	UNC80 (ENSCPRG00005002350) #36	ENSCPRG00005002217 #37
Cryptodira	ANCESTRAL SPECIES	5	ENSGT00940000156462.B	ENSGT00950000183138.a.b	ENSGT00390000005489.a	ENSGT00940000161839	ENSGT00530000063564.b	ENSGT00390000016508	ENSGT00940000159224	ENSGT00940000154349	ENSGT00520000055666.b	ENSGT00390000014310.b	ENSGT00940000163794	ENSGT00390000008926	ENSGT00940000155126 #19	ENSGT00390000004553 #20	ENSGT00940000157295 #21	ENSGT00940000156532 #22	ENSGT00720000108792.B #23	ENSGT00940000155053 #24	ENSGT00940000157137 #25	ENSGT00940000154695 #26	ENSGT00940000157192 #28	ENSGT00960000189051	ENSGT00530000063186.b.b #29	ENSGT01030000234570.d.a #31	ENSGT00940000157652 #32	ENSGT00530000063688.a #34	ENSGT00390000001447 #35	ENSGT00640000091496 #36	ENSGT00940000156597.b #37	ENSGT00940000159094	ENSGT00940000156307.b
Testudinoidea	ANCESTRAL SPECIES	11	ENSGT00950000183138.a.b	ENSGT00390000005489.a	ENSGT00940000161839	ENSGT00530000063564.b	ENSGT00390000016508	ENSGT00940000159224	ENSGT00940000154349	ENSGT00520000055666.b	ENSGT00390000014310.b.b	ENSGT00390000014310.a	ENSGT00940000163794	ENSGT00390000008926	ENSGT00940000155126 #19	ENSGT00390000004553 #20	ENSGT00940000157295 #21	ENSGT00940000156532 #22	ENSGT00720000108792.B #23	ENSGT00940000155053 #24	ENSGT00940000157137 #25	ENSGT00940000154695 #26	ENSGT00940000157192 #28	ENSGT00960000189051	ENSGT00530000063186.b.b #29	ENSGT01030000234570.d.a #31	ENSGT00940000157652 #32	ENSGT00530000063688.a #34	ENSGT00390000001447 #35	ENSGT00640000091496 #36	ENSGT00940000156597.b #37	ENSGT00940000159094	ENSGT00940000156307.b
Emydidae	ANCESTRAL SPECIES	4										ENSGT00390000014310.a	ENSGT00940000163794	ENSGT00390000008926	ENSGT00940000155126 #19	ENSGT00390000004553 #20	ENSGT00940000157295 #21	ENSGT00940000156532 #22	ENSGT00720000108792.B #23	ENSGT00940000155053 #24	ENSGT00940000157137 #25	ENSGT00940000154695 #26	ENSGT00940000157192 #28	ENSGT00530000063186.b.b #29	ENSGT01030000234570.d.a #31	ENSGT00940000157652 #32	ENSGT00530000063688.a #34	ENSGT00390000001447 #35	ENSGT00640000091496 #36	ENSGT00940000156597.b #37	ENSGT00940000159094	ENSGT00940000156307.b	ENSGT00390000012547.b
painted turtle	DUPLICATION
painted turtle	MODERN SPECIES	1596																ENSCPBG00000004972 #22
painted turtle	MODERN SPECIES	1066																ENSCPBG00000011799 #22	VWC2L (ENSCPBG00000011780) #23	ENSCPBG00000011770 #24
Three-toed box turtle	MODERN SPECIES	25												MREG (ENSTMTG00000003191)	FN1 (ENSTMTG00000003016) #19	ATIC (ENSTMTG00000002987) #20	ABCA12 (ENSTMTG00000002947) #21	BARD1 (ENSTMTG00000002934) #22	VWC2L (ENSTMTG00000002929) #23	ENSTMTG00000002921 #24	ENSTMTG00000002912 #24	IKZF2 (ENSTMTG00000002878) #25	ERBB4 (ENSTMTG00000002803) #26	CPS1 (ENSTMTG00000002766) #28	LANCL1 (ENSTMTG00000002758) #29	MYL1 (ENSTMTG00000002746) #31	ACADL (ENSTMTG00000002733) #32	KANSL1L (ENSTMTG00000002723) #34	ENSTMTG00000002718 #35	UNC80 (ENSTMTG00000002568) #36	ENSTMTG00000002484 #37	PTH2R (ENSTMTG00000002463)	PIKFYVE (ENSTMTG00000001522)
Testudinidae	ANCESTRAL SPECIES	8					ENSGT00940000159224	ENSGT00940000154349	ENSGT00520000055666.b	ENSGT00390000014310.b.b.a	ENSGT00390000014310.a	ENSGT00940000163794.bb	ENSGT00940000163794.cb	ENSGT00390000008926	ENSGT00940000155126 #19	ENSGT00390000004553 #20	ENSGT00940000157295 #21	ENSGT00940000156532 #22	ENSGT00720000108792.B #23	ENSGT00940000155053 #24	ENSGT00940000157137 #25	ENSGT00940000154695 #26	ENSGT00940000157192 #28	ENSGT00960000189051	ENSGT00530000063186.b.b #29	ENSGT01030000234570.d.a #31	ENSGT00940000157652 #32	ENSGT00530000063688.a #34	ENSGT00390000001447 #35	ENSGT00640000091496 #36	ENSGT00940000156597.b #37	ENSGT00940000159094	ENSGT00940000156307.b
Goode s thornscrub tortoise	MODERN SPECIES	2	ENSGEVG00005012923	ENSGEVG00005012964	ENSGEVG00005013041	ENSGEVG00005013250	RAMP1 (ENSGEVG00005013278)	UBE2F (ENSGEVG00005013338)	SPATC1L (ENSGEVG00005013387)	ENSGEVG00005013545	ENSGEVG00005013598	ENSGEVG00005013629	MREG (ENSGEVG00005013661)	ENSGEVG00005013700 #19	ENSGEVG00005013790 #19	ATIC (ENSGEVG00005013845) #20	ABCA12 (ENSGEVG00005013908) #21	BARD1 (ENSGEVG00005014357) #22	VWC2L (ENSGEVG00005014438) #23	ENSGEVG00005014460 #24	ENSGEVG00005014540 #24	IKZF2 (ENSGEVG00005014648) #25	ERBB4 (ENSGEVG00005015015) #26	CPS1 (ENSGEVG00005015920) #28	ENSGEVG00005016107	LANCL1 (ENSGEVG00005016202) #29	MYL1 (ENSGEVG00005016236) #31	ACADL (ENSGEVG00005016296) #32	KANSL1L (ENSGEVG00005016332) #34	ENSGEVG00005016355 #35	UNC80 (ENSGEVG00005004294) #36	ENSGEVG00005004848 #37	PTH2R (ENSGEVG00005005111)
Abingdon island giant tortoise	MODERN SPECIES	2320					UBE2F (ENSCABG00000021104)	ENSCABG00000021100	ENSCABG00000021098	ENSCABG00000021095	ENSCABG00000021094	ENSCABG00000021092	MREG (ENSCABG00000021090)	ENSCABG00000021086	FN1 (ENSCABG00000018238) #19	ATIC (ENSCABG00000018118) #20	ABCA12 (ENSCABG00000018106) #21	BARD1 (ENSCABG00000018074) #22
Chinese turtle	MODERN SPECIES	1375	COL6A3 (ENSPSIG00000017427)	MLPH (ENSPSIG00000017140)	PRLH (ENSPSIG00000017065)	RAB17 (ENSPSIG00000016995)	LRRFIP1 (ENSPSIG00000016774)	ENSPSIG00000016767	RAMP1 (ENSPSIG00000016764)	UBE2F (ENSPSIG00000016759)	ENSPSIG00000016742	ENSPSIG00000016707	ENSPSIG00000016701	MREG (ENSPSIG00000016698)	FN1 (ENSPSIG00000015987) #19	ATIC (ENSPSIG00000015711) #20	ABCA12 (ENSPSIG00000015309) #21	BARD1 (ENSPSIG00000015299) #22	VWC2L (ENSPSIG00000015244) #23	ENSPSIG00000015060 #24	ENSPSIG00000001304	ENSPSIG00000015030 #24	IKZF2 (ENSPSIG00000014940) #25	ERBB4 (ENSPSIG00000013711) #26	ENSPSIG00000013508 #28	ENSPSIG00000013503 #28	LANCL1 (ENSPSIG00000013378) #29	MYL1 (ENSPSIG00000013292) #31	ACADL (ENSPSIG00000012661) #32	KANSL1L (ENSPSIG00000012588) #34	ENSPSIG00000012534 #35	UNC80 (ENSPSIG00000010780) #36	MAP2 (ENSPSIG00000010770) #37
Lepidosauria	ANCESTRAL SPECIES	7	ENSGT01090000260051.b.b	ENSGT00390000000977	ENSGT00940000156462.C	ENSGT00950000183138.a.b	ENSGT00390000005489.a	ENSGT00940000161839	ENSGT00530000063564.b	ENSGT00940000165690	ENSGT00940000159224	ENSGT00940000154349	ENSGT00940000163794	ENSGT00390000008926	ENSGT00940000155126 #19	ENSGT00390000004553 #20	ENSGT00940000157295 #21	ENSGT00940000156532 #22	ENSGT00720000108792.B #23	ENSGT00940000155053 #24	ENSGT00940000157137 #25	ENSGT00940000154695 #26	ENSGT00940000157192 #28	ENSGT00990000210950	ENSGT00530000063186.b.b #29	ENSGT01030000234570.d.a #31	ENSGT00940000157652 #32	ENSGT00530000063688.a #34	ENSGT00390000001447 #35	ENSGT00640000091496 #36	ENSGT00940000156597.b #37	ENSGT00940000159094	ENSGT00940000156307.b
tuatara	DUPLICATION
tuatara	MODERN SPECIES	572														ABCA12 (ENSSPUG00000010159) #21	ENSSPUG00000010144 #22	ENSSPUG00000010124 #22
tuatara	MODERN SPECIES	572															ABCA12 (ENSSPUG00000010159) #21	ENSSPUG00000010144 #22	ENSSPUG00000010124 #22
Episquamata	ANCESTRAL SPECIES		ENSGT00940000159677.c.b.a.b	ENSGT00940000163820	ENSGT00940000157267	ENSGT00720000108822	ENSGT00940000153969.b	ENSGT00940000161996	ENSGT00940000157440	ENSGT00530000063564.b	ENSGT00940000165690	ENSGT00940000159224	ENSGT00940000154349	ENSGT00390000008926	ENSGT00940000155126 #19	ENSGT00390000004553 #20	ENSGT00940000157295 #21	ENSGT00940000156532 #22	ENSGT00720000108792.B #23	ENSGT00940000155053 #24	ENSGT00940000157137 #25	ENSGT00940000154695 #26	ENSGT00940000157192 #28	ENSGT00990000210950	ENSGT00530000063186.b.b #29	ENSGT01030000234570.d.a #31	ENSGT00940000157652 #32	ENSGT00530000063688.a #34	ENSGT00390000001447 #35	ENSGT00640000091496 #36	ENSGT00940000156597.b #37	ENSGT00940000159094	ENSGT00940000156307.b
Toxicofera	ANCESTRAL SPECIES		ENSGT00940000159677.d	ENSGT00940000157267	ENSGT00720000108822	ENSGT00940000153969.b	ENSGT00940000161996	ENSGT00940000165503	ENSGT00940000157440	ENSGT00530000063564.b	ENSGT00940000165690	ENSGT00940000159224	ENSGT00940000154349	ENSGT00390000008926	ENSGT00940000155126 #19	ENSGT00390000004553 #20	ENSGT00940000157295 #21	ENSGT00940000156532 #22	ENSGT00720000108792.B #23	ENSGT00940000155053 #24	ENSGT00940000157137 #25	ENSGT00940000154695 #26	ENSGT00940000157192 #28	ENSGT00990000210950	ENSGT00530000063186.b.b #29	ENSGT01030000234570.d.a #31	ENSGT00940000157652 #32	ENSGT00530000063688.a #34	ENSGT00390000001447 #35	ENSGT00640000091496 #36	ENSGT00940000156597.b #37	ENSGT00940000159094	ENSGT00940000156307.b
Elapidae	DUPLICATION
Elapidae	ANCESTRAL SPECIES																	ENSGT00940000156532.i #22
Indian cobra	MODERN SPECIES		TRPM8 (ENSNNAG00000014583)	ARL4C (ENSNNAG00000016424)	SH3BP4 (ENSNNAG00000016430)	ENSNNAG00000016434	UGT1A1 (ENSNNAG00000016458)	ENSNNAG00000016536	HDAC4 (ENSNNAG00000016586)	RAMP1 (ENSNNAG00000016973)	LRRFIP1 (ENSNNAG00000016996)	UBE2F (ENSNNAG00000017117)	FN1 (ENSNNAG00000017132) #19	ATIC (ENSNNAG00000017270) #20	ENSNNAG00000003837 #21	ENSNNAG00000003847 #21	ENSNNAG00000003892 #21	BARD1 (ENSNNAG00000003981) #22	ENSNNAG00000004003 #24	ENSNNAG00000004042 #24	ENSNNAG00000004078	IKZF2 (ENSNNAG00000004094) #25	ENSNNAG00000004158	ERBB4 (ENSNNAG00000004204) #26	CPS1 (ENSNNAG00000004686) #28	ENSNNAG00000004905	LANCL1 (ENSNNAG00000004916) #29	MYL1 (ENSNNAG00000004947) #31	ACADL (ENSNNAG00000005029) #32	KANSL1L (ENSNNAG00000005103) #34	ENSNNAG00000005141 #35	UNC80 (ENSNNAG00000005183) #36	ENSNNAG00000005292 #37
Elapidae_a	ANCESTRAL SPECIES																	ENSGT00940000156532.i #22
Blue-lipped sea krait	MODERN SPECIES	10950																ENSLLTG00000009361 #22
Elapidae	ANCESTRAL SPECIES		ENSGT00970000197610.A	ENSGT00940000160270	ENSGT00940000160639	ENSGT00390000013151.a.a	ENSGT00940000178952.b	ENSGT00940000159677.c.b.b	ENSGT00940000165503	ENSGT00940000157440	ENSGT00940000159224	ENSGT00940000165690	ENSGT00530000063564.b	ENSGT00940000154349	ENSGT00940000155126 #19	ENSGT00390000004553 #20	ENSGT00940000157295.g #21	ENSGT00940000156532.j #22	ENSGT00720000108792.B #23	ENSGT00940000155053 #24	ENSGT00940000157137.e #25	ENSGT00940000157137.f #25	ENSGT00940000154695 #26	ENSGT00940000157192 #28	ENSGT00990000210950	ENSGT00530000063186.b.b #29	ENSGT01030000234570.d.a #31	ENSGT00940000157652 #32	ENSGT00530000063688.a #34	ENSGT00390000001447 #35	ENSGT00640000091496 #36	ENSGT00940000156597.b #37	ENSGT00940000159094
Elapidae_a	ANCESTRAL SPECIES	39	ENSGT00970000197610.A	ENSGT00940000160270	ENSGT00940000160639	ENSGT00390000013151.a.a	ENSGT00940000178952.b	ENSGT00940000159677.c.b.b.c	ENSGT00940000165503	ENSGT00940000157440	ENSGT00940000159224	ENSGT00940000165690	ENSGT00530000063564.b	ENSGT00940000154349	ENSGT00940000155126 #19	ENSGT00390000004553 #20	ENSGT00940000157295.g #21	ENSGT00940000156532.j #22	ENSGT00720000108792.B #23	ENSGT00940000155053 #24	ENSGT00940000157137.e #25	ENSGT00940000154695 #26	ENSGT00940000157192 #28	ENSGT00990000210950	ENSGT00530000063186.b.b #29	ENSGT01030000234570.d.a #31	ENSGT00940000157652 #32	ENSGT00530000063688.a #34	ENSGT00390000001447 #35	ENSGT00640000091496 #36	ENSGT00940000156597.b #37	ENSGT00940000159094	ENSGT00940000156307.b.g
Acanthophiinae	ANCESTRAL SPECIES	39	ENSGT00970000197610.A	ENSGT00940000160270	ENSGT00940000160639	ENSGT00390000013151.a.a	ENSGT00940000178952.b	ENSGT00940000159677.c.b.b.c	ENSGT00940000165503	ENSGT00940000157440	ENSGT00940000159224	ENSGT00940000165690	ENSGT00530000063564.b	ENSGT00940000154349	ENSGT00940000155126 #19	ENSGT00390000004553 #20	ENSGT00940000157295.g #21	ENSGT00940000156532.j #22	ENSGT00720000108792.B #23	ENSGT00940000155053 #24	ENSGT00940000157137.e #25	ENSGT00940000154695 #26	ENSGT00940000157192 #28	ENSGT00990000210950	ENSGT00530000063186.b.b #29	ENSGT01030000234570.d.a #31	ENSGT00940000157652 #32	ENSGT00530000063688.a #34	ENSGT00990000211987	ENSGT00390000001447 #35	ENSGT00640000091496 #36	ENSGT00940000156597.b #37	ENSGT00940000159094
Eastern brown snake	MODERN SPECIES	36	ENSPTXG00000003401	TRPM8 (ENSPTXG00000003411)	ARL4C (ENSPTXG00000006245)	SH3BP4 (ENSPTXG00000006246)	ENSPTXG00000006247	UGT1A1 (ENSPTXG00000006248)	ENSPTXG00000006459	HDAC4 (ENSPTXG00000006466)	RAMP1 (ENSPTXG00000007137)	LRRFIP1 (ENSPTXG00000007138)	UBE2F (ENSPTXG00000007143)	FN1 (ENSPTXG00000007144) #19	ENSPTXG00000007146	ATIC (ENSPTXG00000007147) #20	ABCA12 (ENSPTXG00000007148) #21	ENSPTXG00000007149 #22	VWC2L (ENSPTXG00000007150) #23	SPAG16 (ENSPTXG00000007151) #24	IKZF2 (ENSPTXG00000007156) #25	ERBB4 (ENSPTXG00000007162) #26	CPS1 (ENSPTXG00000007248) #28	ENSPTXG00000007250	LANCL1 (ENSPTXG00000007251) #29	MYL1 (ENSPTXG00000007252) #31	ACADL (ENSPTXG00000007253) #32	KANSL1L (ENSPTXG00000007254) #34	ENSPTXG00000007255	ENSPTXG00000007256 #35	UNC80 (ENSPTXG00000007262) #36	ENSPTXG00000007270 #37	PTH2R (ENSPTXG00000007351)
Mainland tiger snake	MODERN SPECIES	50						HDAC4 (ENSNSUG00000004025)	RAMP1 (ENSNSUG00000004047)	ENSNSUG00000004051	ENSNSUG00000004053	ENSNSUG00000004057	UBE2F (ENSNSUG00000004058)	ENSNSUG00000004060 #19	ENSNSUG00000004070 #19	ATIC (ENSNSUG00000004072) #20	ABCA12 (ENSNSUG00000004082) #21	ENSNSUG00000004101 #22	VWC2L (ENSNSUG00000004152) #23	ENSNSUG00000004154 #24	ENSNSUG00000004165 #24	IKZF2 (ENSNSUG00000004175) #25	ENSNSUG00000004221	ERBB4 (ENSNSUG00000004236) #26	CPS1 (ENSNSUG00000004536) #28	ENSNSUG00000004700	LANCL1 (ENSNSUG00000004707) #29	MYL1 (ENSNSUG00000004715) #31	ACADL (ENSNSUG00000004717) #32	KANSL1L (ENSNSUG00000004719) #34	ENSNSUG00000004721	ENSNSUG00000004723 #35	UNC80 (ENSNSUG00000004726) #36
Blue-lipped sea krait	MODERN SPECIES	1163																ENSLLTG00000011726 #22
Lizard	MODERN SPECIES		ENSACAG00000036597	KCTD18 (ENSACAG00000016086)	SPATS2L (ENSACAG00000016043)	ENSACAG00000037481	maip1 (ENSACAG00000035749)	ENSACAG00000035190	TYW5 (ENSACAG00000036776)	ENSACAG00000015939	ENSACAG00000026010	ENSACAG00000040605	ENSACAG00000015931	MREG (ENSACAG00000015921)	FN1 (ENSACAG00000015637) #19	ATIC (ENSACAG00000015527) #20	ABCA12 (ENSACAG00000015468) #21	BARD1 (ENSACAG00000015438) #22	VWC2L (ENSACAG00000015435) #23	ENSACAG00000042550 #24	SPAG16 (ENSACAG00000009635) #24	ENSACAG00000041259	IKZF2 (ENSACAG00000025864) #25	ENSACAG00000038851	ENSACAG00000038179	ENSACAG00000043707	ERBB4 (ENSACAG00000009921) #26	CPS1 (ENSACAG00000010170) #28	LANCL1 (ENSACAG00000010566) #29	MYL1 (ENSACAG00000010643) #31	ACADL (ENSACAG00000010677) #32	KANSL1L (ENSACAG00000010727) #34	ENSACAG00000010750 #35
Laterata	ANCESTRAL SPECIES	13	ENSGT00940000159677.c.b.a.b	ENSGT00940000163820	ENSGT00940000157267	ENSGT00720000108822	ENSGT00940000153969.b	ENSGT00940000161996	ENSGT00940000157440	ENSGT00530000063564.b	ENSGT00940000165690	ENSGT00940000159224	ENSGT00940000154349	ENSGT00390000008926	ENSGT00940000155126 #19	ENSGT00390000004553 #20	ENSGT00940000157295 #21	ENSGT00940000156532 #22	ENSGT00720000108792.B #23	ENSGT00940000155053 #24	ENSGT00940000157137 #25	ENSGT00940000154695 #26	ENSGT00940000157192 #28	ENSGT00530000063186.b.b #29	ENSGT01030000234570.d.a #31	ENSGT00940000157652 #32	ENSGT00530000063688.a #34	ENSGT00390000001447 #35	ENSGT00640000091496 #36	ENSGT00940000156597.b #37
Common wall lizard	MODERN SPECIES		ENSPMRG00000002607	ENSPMRG00000002610	TWIST2 (ENSPMRG00000002615)	ENSPMRG00000002621	HDAC4 (ENSPMRG00000002624)	LRRFIP1 (ENSPMRG00000002645)	ENSPMRG00000002666	RAMP1 (ENSPMRG00000002672)	UBE2F (ENSPMRG00000002680)	MREG (ENSPMRG00000002696)	ENSPMRG00000002705	ENSPMRG00000002711	FN1 (ENSPMRG00000003085) #19	ATIC (ENSPMRG00000004219) #20	ABCA12 (ENSPMRG00000004583) #21	BARD1 (ENSPMRG00000004748) #22	ENSPMRG00000004754	VWC2L (ENSPMRG00000004758) #23	ENSPMRG00000004761 #24	ENSPMRG00000004762	SPAG16 (ENSPMRG00000004767) #24	ENSPMRG00000004772 #25	ENSPMRG00000004776 #25	ERBB4 (ENSPMRG00000004787) #26	ENSPMRG00000004805	CPS1 (ENSPMRG00000004877) #28	LANCL1 (ENSPMRG00000006481) #29	MYL1 (ENSPMRG00000006498) #31	ENSPMRG00000006524 #32	ENSPMRG00000006588 #35	UNC80 (ENSPMRG00000006650) #36
Argentine black and white tegu	MODERN SPECIES	12	USP40 (ENSSMRG00000020847)	TRAF3IP1 (ENSSMRG00000020846)	ASB1 (ENSSMRG00000020845)	TWIST2 (ENSSMRG00000020843)	HDAC4 (ENSSMRG00000020842)	ENSSMRG00000020841	LRRFIP1 (ENSSMRG00000020840)	ENSSMRG00000020838	ENSSMRG00000020837	ENSSMRG00000020836	UBE2F (ENSSMRG00000020835)	MREG (ENSSMRG00000020834)	FN1 (ENSSMRG00000020833) #19	ATIC (ENSSMRG00000020832) #20	ABCA12 (ENSSMRG00000020831) #21	BARD1 (ENSSMRG00000020830) #22	VWC2L (ENSSMRG00000020829) #23	ENSSMRG00000020827 #24	ENSSMRG00000020826 #24	IKZF2 (ENSSMRG00000020825) #25	ENSSMRG00000020823	ERBB4 (ENSSMRG00000020822) #26	CPS1 (ENSSMRG00000020820) #28	LANCL1 (ENSSMRG00000020819) #29	MYL1 (ENSSMRG00000020818) #31	ACADL (ENSSMRG00000020817) #32	KANSL1L (ENSSMRG00000020816) #34	ENSSMRG00000020815 #35	UNC80 (ENSSMRG00000020808) #36	ENSSMRG00000020807 #37	ENSSMRG00000020804
Anura	ANCESTRAL SPECIES	7	ENSGT00940000166277	ENSGT00940000171532.a	ENSGT00940000156462.C	ENSGT00950000183138.a.b	ENSGT00950000185272	ENSGT00940000161839	ENSGT00530000063564.b	ENSGT00940000177452	ENSGT00940000159224	ENSGT00940000154349	ENSGT00940000163794.y	ENSGT00940000166348	ENSGT00940000155126 #19	ENSGT00390000004553 #20	ENSGT00940000157295 #21	ENSGT00940000156532 #22	ENSGT00720000108792.B #23	ENSGT00940000155053 #24	ENSGT00940000157137 #25	ENSGT00940000154695 #26	ENSGT00390000005983	ENSGT00940000157192 #28	ENSGT00530000063186.b.b #29	ENSGT01030000234570.d.a #31	ENSGT00940000157652 #32	ENSGT00530000063688.a #34	ENSGT00390000001447 #35	ENSGT00640000091496 #36	ENSGT00940000156597.b #37	ENSGT00390000007989	ENSGT00940000155992
Frog	MODERN SPECIES	9	gbx2.1 (ENSXETG00000003290)	agap1 (ENSXETG00000003280)	trpm8 (ENSXETG00000026873)	trpm8b (ENSXETG00000003271)	arl4c (ENSXETG00000043177)	sh3bp4 (ENSXETG00000010910)	ugt1a6 (ENSXETG00000004890)	ramp1 (ENSXETG00000010906)	ube2f (ENSXETG00000010905)	XB5811292 [provisional] (ENSXETG00000031863)	mreg (ENSXETG00000010902)	fn1 (ENSXETG00000010898) #19	atic (ENSXETG00000025087) #20	ENSXETG00000038463 #21	abca12 (ENSXETG00000014244) #21	bard1 (ENSXETG00000014241) #22	ENSXETG00000045433	spag16 (ENSXETG00000038570) #24	vwc2l (ENSXETG00000014240) #23	ikzf2 (ENSXETG00000003127) #25	ENSXETG00000044441	erbb4 (ENSXETG00000000413) #26	ENSXETG00000042388	cps1 (ENSXETG00000006919) #28	lancl1 (ENSXETG00000006918) #29	myl1 (ENSXETG00000006917) #31	kansl1l (ENSXETG00000001088) #34	acadl (ENSXETG00000001085) #32	dpepe (ENSXETG00000001084)	nme9 (ENSXETG00000001083)	rab5d (ENSXETG00000001082)
Coelacanth	MODERN SPECIES	627				ENSLACG00000005882	ENSLACG00000008603	ENSLACG00000009797	LSS (ENSLACG00000010380)	MCM3AP (ENSLACG00000010838)	YBEY (ENSLACG00000011567)	C21orf58 (ENSLACG00000011823)	hnmt (ENSLACG00000012024)	ENSLACG00000022203	FTCD (ENSLACG00000012351)	ENSLACG00000012612	ABCA12 (ENSLACG00000014253) #21	ENSLACG00000014837 #22	VWC2L (ENSLACG00000015603) #23
Actinopterygii	ANCESTRAL SPECIES	142	ENSGT00390000012547.b	ENSGT00940000159743	ENSGT00940000162639	ENSGT00940000161191.B	ENSGT00940000154453.a.a	ENSGT00940000157249	ENSGT00940000155408	ENSGT00940000155235	ENSGT00940000163794	ENSGT00940000154349	ENSGT00940000159224	ENSGT00940000165690	ENSGT00390000007989	ENSGT00940000155752	ENSGT00940000157295 #21	ENSGT00940000156532 #22	ENSGT00720000108792.B #23	ENSGT00940000157137 #25	ENSGT00940000154695 #26	ENSGT00940000157192 #28	ENSGT00530000063186.b.b #29	ENSGT01030000234570.d.a #31	ENSGT00940000157652 #32	ENSGT00530000063688.a #34	ENSGT00940000156597.b #37	ENSGT00640000091496 #36	ENSGT00390000001447 #35	ENSGT00940000154793.C	ENSGT00940000154365.a.b
Reedfish	MODERN SPECIES	16	pikfyve (ENSECRG00000015628)	idh1 (ENSECRG00000015540)	PLEKHM3 (ENSECRG00000015515)	ENSECRG00000015484	ENSECRG00000015123	mettl21a (ENSECRG00000015070)	creb1b (ENSECRG00000015035)	klf7b (ENSECRG00000015008)	zgc:162396 (ENSECRG00000014641)	zgc:162396 (ENSECRG00000014558)	ube2f (ENSECRG00000014448)	ramp1 (ENSECRG00000014413)	pofut2 (ENSECRG00000014386)	MYO1B (ENSECRG00000014259)	ENSECRG00000014140 #21	BARD1 (ENSECRG00000014092) #22	vwc2l (ENSECRG00000009136) #23	IKZF2 (ENSECRG00000009121) #25	erbb4a (ENSECRG00000009097) #26	CPS1 (ENSECRG00000009063) #28	UBA52 (ENSECRG00000009045)	itgb5 (ENSECRG00000009021)	ENSECRG00000009008	slc12a8 (ENSECRG00000008989)	znf148 (ENSECRG00000008976)	ENSECRG00000008959	snx4 (ENSECRG00000008942)	ENSECRG00000008926	OSBPL11 (ENSECRG00000008894)	gpd1c (ENSECRG00000008861)	LMLN (ENSECRG00000008805)
Neopterygii	ANCESTRAL SPECIES	63	ENSGT00390000012547.b	ENSGT00940000159743	ENSGT00940000162639	ENSGT00940000154453.a.b.a	ENSGT00940000157249	ENSGT00940000155408	ENSGT00940000155235	ENSGT00940000163794	ENSGT00940000165586	ENSGT00940000154349	ENSGT00940000159224	ENSGT00940000165690	ENSGT00390000007989	ENSGT00940000155752	ENSGT00940000157295 #21	ENSGT00940000156532 #22	ENSGT00720000108792.B #23	ENSGT00940000157137 #25	ENSGT00940000154695 #26	ENSGT00940000157192 #28	ENSGT00530000063186.b.b #29	ENSGT01030000234570.d.a #31	ENSGT00940000157652 #32	ENSGT00530000063688.a #34	ENSGT00940000156597.b #37	ENSGT00640000091496 #36	ENSGT00390000001447 #35	ENSGT00940000154793.C	ENSGT00940000154365.a.b	ENSGT00940000154067.c	ENSGT01090000260051.b.b
Spotted gar	MODERN SPECIES	650	ENSLOCG00000004199	ENSLOCG00000004209	idh1 (ENSLOCG00000004227)	PLEKHM3 (ENSLOCG00000004251)	ccnyl1 (ENSLOCG00000004267)	mettl21a (ENSLOCG00000004303)	creb1b (ENSLOCG00000004320)	zgc:162396 (ENSLOCG00000004335)	si:ch211-93g23.2 (ENSLOCG00000004350)	ube2f (ENSLOCG00000004366)	ramp1 (ENSLOCG00000004383)	ENSLOCG00000004395	pofut2 (ENSLOCG00000004410)	MYO1B (ENSLOCG00000004425)	ABCA12 (ENSLOCG00000004451) #21	BARD1 (ENSLOCG00000004470) #22	vwc2l (ENSLOCG00000004485) #23	IKZF2 (ENSLOCG00000004501) #25	erbb4a (ENSLOCG00000004529) #26	CPS1 (ENSLOCG00000004580) #28	lancl1 (ENSLOCG00000004634) #29	mylz3 (ENSLOCG00000004651) #31	acadl (ENSLOCG00000004680) #32	KANSL1L (ENSLOCG00000004691) #34	MAP2 (ENSLOCG00000004706) #37	UNC80 (ENSLOCG00000004735) #36	rpe (ENSLOCG00000004757) #35	AGAP1 (ENSLOCG00000004775)	gbx2 (ENSLOCG00000004803)	ENSLOCG00000004813	iqca1 (ENSLOCG00000004845)
Osteoglossocephalai	ANCESTRAL SPECIES	332													ENSGT00940000155752	ENSGT00390000007989	ENSGT00940000157295 #21	ENSGT00940000156532 #22	ENSGT00720000108792.B #23	ENSGT00940000157137 #25	ENSGT00940000154695 #26	ENSGT00940000157192 #28	ENSGT00530000063186.b.b #29	ENSGT01030000234570.d.a.p #31	ENSGT00940000157652 #32
Osteoglossiformes	ANCESTRAL SPECIES	422														ENSGT00940000155752.c	ENSGT00390000007989	ENSGT00940000156532 #22	ENSGT00720000108792.B #23	ENSGT00940000157137.u #25	ENSGT00940000154695.b #26	ENSGT00530000063186.b.b.j #29	ENSGT01030000234570.d.a.o #31	ENSGT00940000157652 #32
P. kingsleyae	MODERN SPECIES	490															pofut2 (ENSPKIG00000023893)	ENSPKIG00000023872 #22	vwc2l (ENSPKIG00000023855) #23	ENSPKIG00000023845
Asian bonytongue	MODERN SPECIES	5	ATP1A1 (ENSSFOG00015016430)	ENSSFOG00015024557	satb2 (ENSSFOG00015026602)	si:ch211-93g23.2 (ENSSFOG00015018587)	ube2f (ENSSFOG00015018547)	ramp1 (ENSSFOG00015018531)	ENSSFOG00015018462	ENSSFOG00015025512	ENSSFOG00015023310	ENSSFOG00015027617	ENSSFOG00015024451	ENSSFOG00015029738	ENSSFOG00015029328	MYO1B (ENSSFOG00015017799)	pofut2 (ENSSFOG00015017724)	ENSSFOG00015017681 #22	vwc2l (ENSSFOG00015025867) #23	IKZF2 (ENSSFOG00015024820) #25	ERBB4 (ENSSFOG00015017584) #26	lancl1 (ENSSFOG00015017529) #29	myl1 (ENSSFOG00015016288) #31	acadl (ENSSFOG00015016181) #32	ENSSFOG00015031116	NR4A2 (ENSSFOG00015016157)	gpd2 (ENSSFOG00015016057)	ENSSFOG00015016032	ACVR1C (ENSSFOG00015016015)	ENSSFOG00015023204	ENSSFOG00015032322	upp2 (ENSSFOG00015025462)	ENSSFOG00015015851
Clupeocephala	ANCESTRAL SPECIES	255										ENSGT00390000012561.b.pb.a	ENSGT00390000007946.i.a	ENSGT00940000155752	ENSGT00390000007989	ENSGT00980000199646	ENSGT00940000157295 #21	ENSGT00940000156532 #22	ENSGT00720000108792.B #23	ENSGT00940000157137 #25	ENSGT00940000154695.d.a #26	ENSGT00940000157192 #28	ENSGT01030000234570.d.a.o #31	ENSGT00940000156597.a.a ##37	ENSGT00770000121792	ENSGT00530000063688.a #34	ENSGT00530000065251	ENSGT00970000197603	ENSGT00710000106813.A	ENSGT00940000160130	ENSGT00940000157406	ENSGT00930000151029.i.a	ENSGT00940000164835
Otomorpha	ANCESTRAL SPECIES	301										ENSGT00390000012561.b.pb.a	ENSGT00390000007946.i.a	ENSGT00940000155752	ENSGT00390000007989	ENSGT00980000199646	ENSGT00940000157295 #21	ENSGT00940000156532 #22	ENSGT00720000108792.B #23	ENSGT00940000157137 #25	ENSGT00940000154695.d.a #26	ENSGT00940000157192 #28	ENSGT01030000234570.d.a.o #31	ENSGT00940000156597.a.a ##37	ENSGT00770000121792	ENSGT00530000063688.a #34	ENSGT00530000065251.a.b.a	ENSGT00970000197603	ENSGT00710000106813.A	ENSGT00940000160130	ENSGT00940000157406	ENSGT00930000151029.i.a	ENSGT00940000164835
Otophysi	ANCESTRAL SPECIES	102	ENSGT00390000015143	ENSGT01040000240966	ENSGT00390000012446	ENSGT00390000007295	ENSGT00680000100065	ENSGT00940000153744.A	ENSGT00390000010706	ENSGT00950000183178.b.a	ENSGT00940000157085	ENSGT00940000165813.b	ENSGT00940000167830	ENSGT00890000139491	ENSGT00390000007989	ENSGT00980000199646	ENSGT00940000157295 #21	ENSGT00940000156532 #22	ENSGT00720000108792.B #23	ENSGT00940000157137 #25	ENSGT00940000154695.d.a #26	ENSGT00940000157192 #28	ENSGT01030000234570.d.a.o #31	ENSGT00940000156597.a.a ##37	ENSGT00770000121792	ENSGT00530000063688.a #34	ENSGT00530000065251.a.b.a	ENSGT00710000106813.A	ENSGT00940000160130	ENSGT00940000157406	ENSGT00930000151029.i.a	ENSGT00940000164835	ENSGT00940000158398
Characiphysae	ANCESTRAL SPECIES	53	ENSGT00390000006303	ENSGT00390000015143	ENSGT01040000240966	ENSGT00390000012446	ENSGT00390000007295	ENSGT00680000100065	ENSGT00940000153744.A	ENSGT00390000010706	ENSGT00950000183178.b.a	ENSGT00940000157085	ENSGT00940000165813.b	ENSGT00940000167830	ENSGT00890000139491	ENSGT00390000007989	ENSGT00940000157295 #21	ENSGT00940000156532 #22	ENSGT00720000108792.B #23	ENSGT00940000157137 #25	ENSGT00940000154695.d.a #26	ENSGT00940000157192 #28	ENSGT01030000234570.d.a.o #31	ENSGT00940000156597.a.a.c ##37	ENSGT00770000121792	ENSGT00940000156597.a.a.d ##37	ENSGT00530000063688.a #34
Channel catfish	MODERN SPECIES	25	stat4 (ENSIPUG00000008689)	wdr75 (ENSIPUG00000008614)	slc40a1 (ENSIPUG00000008570)	asnsd1 (ENSIPUG00000008541)	zgc:136439 (ENSIPUG00000008516)	ankar (ENSIPUG00000008494)	osgepl1 (ENSIPUG00000008474)	adat3 (ENSIPUG00000008465)	ormdl1 (ENSIPUG00000008436)	PMS1 (ENSIPUG00000008368)	mstn (ENSIPUG00000008311)	c6h2orf88 (ENSIPUG00000008299)	hibch (ENSIPUG00000008201)	pofut2 (ENSIPUG00000008138)	ABCA12 (ENSIPUG00000008030) #21	bard1 (ENSIPUG00000008007) #22	vwc2l (ENSIPUG00000007989) #23	ENSIPUG00000007960	ikzf2 (ENSIPUG00000007917) #25	ENSIPUG00000007903	ENSIPUG00000007895	erbb4 (ENSIPUG00000007757) #26	cps1 (ENSIPUG00000007625) #28	myl1 (ENSIPUG00000007577) #31	map2 (ENSIPUG00000007425) ##37	kansl1l (ENSIPUG00000007360) #34	ENSIPUG00000007344	ENSIPUG00000007331	calcrla (ENSIPUG00000007286)	tfpia (ENSIPUG00000007252)	gulp1a (ENSIPUG00000007217)
Characiphysae_b	ANCESTRAL SPECIES	88	ENSGT00390000006303	ENSGT00390000015143	ENSGT01040000240966	ENSGT00390000012446	ENSGT00390000007295	ENSGT00680000100065	ENSGT00940000153744.A	ENSGT00390000010706	ENSGT00950000183178.b.a	ENSGT00940000157085	ENSGT00940000165813.b	ENSGT00940000167830	ENSGT00890000139491	ENSGT00390000007989	ENSGT00940000157295 #21	ENSGT00940000156532 #22	ENSGT00720000108792.B #23	ENSGT00940000157137 #25	ENSGT00940000154695.d.a #26	ENSGT00940000157192 #28	ENSGT01030000234570.d.a.o #31	ENSGT00940000156597.a.a.c ##37	ENSGT00770000121792	ENSGT00940000156597.a.a.d ##37	ENSGT00530000063688.a #34
Characoidei	ANCESTRAL SPECIES	43	ENSGT00390000006303	ENSGT00390000015143	ENSGT00390000012446	ENSGT00390000007295	ENSGT00680000100065	ENSGT00940000153744.A	ENSGT00390000010706	ENSGT00950000183178.b.a	ENSGT00940000157085	ENSGT00940000165813.b	ENSGT00940000167830	ENSGT00890000139491	ENSGT00390000007989	ENSGT00980000199646	ENSGT00940000157295 #21	ENSGT00940000156532 #22	ENSGT00720000108792.B #23	ENSGT00940000157137 #25	ENSGT00940000154695.d.a #26	ENSGT00940000157192 #28	ENSGT01030000234570.d.a.o #31	ENSGT00940000156597.a.a.c ##37	ENSGT00770000121792	ENSGT00940000156597.a.a.d ##37	ENSGT00530000063688.a #34
Red-bellied piranha	MODERN SPECIES	128															ENSPNAG00000002771 #21	BARD1 (ENSPNAG00000013463) #22	vwc2l (ENSPNAG00000005242) #23	IKZF2 (ENSPNAG00000002742) #25	ERBB4 (ENSPNAG00000013421) #26	CPS1 (ENSPNAG00000002674) #28	ENSPNAG00000002587	myl1 (ENSPNAG00000013155) #31	ENSPNAG00000002558 ##37	ENSPNAG00000013048 ##37	ENSPNAG00000013039 #34
Mexicana tetra	MODERN SPECIES	10	asnsd1 (ENSAMXG00000035139)	zgc:136439 (ENSAMXG00000018655)	ENSAMXG00000037278	ankar (ENSAMXG00000018670)	osgepl1 (ENSAMXG00000018686)	adat3 (ENSAMXG00000025110)	ormdl1 (ENSAMXG00000033557)	pms1 (ENSAMXG00000018711)	mstnb (ENSAMXG00000018743)	ENSAMXG00000038761	hibch (ENSAMXG00000018759)	pofut2 (ENSAMXG00000035853)	ENSAMXG00000039838	ENSAMXG00000035856	ABCA12 (ENSAMXG00000018815) #21	ENSAMXG00000018892 #22	vwc2l (ENSAMXG00000018901) #23	tssk6 (ENSAMXG00000038766)	ENSAMXG00000033846	IKZF2 (ENSAMXG00000038726) #25	ERBB4 (ENSAMXG00000018917) #26	CPS1 (ENSAMXG00000006717) #28	myl1 (ENSAMXG00000006751) #31	ENSAMXG00000034032 ##37	ENSAMXG00000041387	ENSAMXG00000006762 #34	spopla (ENSAMXG00000006769)	NXPH2 (ENSAMXG00000006797)	ugt1a2 (ENSAMXG00000038844)	ugt1a2 (ENSAMXG00000031296)	prmt2 (ENSAMXG00000032742)
Electric eel	MODERN SPECIES	260	wdr75 (ENSEEEG00000023230)	slc40a1 (ENSEEEG00000023227)	ENSEEEG00000023225	asnsd1 (ENSEEEG00000023224)	zgc:136439 (ENSEEEG00000023223)	ankar (ENSEEEG00000023220)	osgepl1 (ENSEEEG00000023216)	adat3 (ENSEEEG00000023213)	ormdl1 (ENSEEEG00000023211)	pms1 (ENSEEEG00000023210)	mstnb (ENSEEEG00000023195)	ENSEEEG00000023192	hibch (ENSEEEG00000023166)	pofut2 (ENSEEEG00000023147)	ENSEEEG00000023143 #21	BARD1 (ENSEEEG00000023142) #22	vwc2l (ENSEEEG00000023140) #23	IKZF2 (ENSEEEG00000023138) #25	ENSEEEG00000023137 #26	ERBB4 (ENSEEEG00000023134) #26
Cyprinoidei	DUPLICATION
Cyprinoidei	ANCESTRAL SPECIES	40	ENSGT00390000015143	ENSGT01040000240966	ENSGT00390000007295	ENSGT00680000100065	ENSGT00390000012446	ENSGT00940000153744.A	ENSGT00390000010706	ENSGT00950000183178.b.a	ENSGT00940000157085	ENSGT00940000165813.b	ENSGT00940000167830	ENSGT00890000139491	ENSGT00390000007989	ENSGT00980000199646	ENSGT00940000157295 #21	ENSGT00940000156532.o #22	ENSGT00940000156532.p #22	ENSGT00720000108792.B #23	ENSGT00940000157137 #25	ENSGT00940000154695.d.a #26	ENSGT00940000157192 #28	ENSGT01030000234570.d.a.o #31	ENSGT00940000156597.a.a ##37	ENSGT00530000063688.a #34	ENSGT00530000065251.a.b.a	ENSGT00710000106813.A	ENSGT00940000160130	ENSGT00940000157406	ENSGT00930000151029.i.a	ENSGT00940000164835	ENSGT00940000158398
Cyprininae	ANCESTRAL SPECIES	181	ENSGT00390000015143.j	ENSGT01040000240966.b	ENSGT00390000012446.a	ENSGT00390000007295	ENSGT00680000100065.e	ENSGT00390000012446.b	ENSGT00940000153744.A.a	ENSGT00390000010706.b	ENSGT00950000183178.b.a.d	ENSGT00940000157085.a	ENSGT00940000165813.b.a	ENSGT00940000167830.e.a	ENSGT00890000139491.l	ENSGT00390000007989.w	ENSGT00940000157295.a #21	ENSGT00940000156532.o #22	ENSGT00940000156532.p.a #22	ENSGT00720000108792.B.c #23	ENSGT00940000157137.r #25	ENSGT00940000154695.d.a.a #26	ENSGT00940000157192.f #28	ENSGT01030000234570.d.a.o.c #31	ENSGT00940000156597.a.a.b ##37	ENSGT00530000063688.a.a #34	ENSGT00530000065251.a.b.a	ENSGT00710000106813.A.cb	ENSGT00940000160130.d	ENSGT00940000157406.gb	ENSGT00930000151029.i.a.d	ENSGT00940000164835.a	ENSGT00940000158398.k
Cyprininae_a	ANCESTRAL SPECIES	120	ENSGT00390000015143.j	ENSGT01040000240966.b	ENSGT00390000012446.a	ENSGT00390000007295	ENSGT00680000100065.e	ENSGT00390000012446.b	ENSGT00940000153744.A.a	ENSGT00390000010706.b	ENSGT00950000183178.b.a.d	ENSGT00940000157085.a	ENSGT00940000165813.b.a	ENSGT00940000167830.e.a	ENSGT00890000139491.l	ENSGT00390000007989.w	ENSGT00940000157295.a #21	ENSGT00940000156532.o #22	ENSGT00940000156532.p.a #22	ENSGT00720000108792.B.c #23	ENSGT00940000157137.r #25	ENSGT00940000154695.d.a.a #26	ENSGT00940000157192.f #28	ENSGT01030000234570.d.a.o.c #31	ENSGT00940000156597.a.a.b ##37	ENSGT00530000063688.a.a #34	ENSGT00530000065251.a.b.a	ENSGT00710000106813.A.cb	ENSGT00940000160130.d	ENSGT00940000157406.gb	ENSGT00930000151029.i.a.d	ENSGT00940000164835.a	ENSGT00940000158398.k
Common carp reference	MODERN SPECIES	46	STAT4 (ENSCCRG00000048893)	slc40a1 (ENSCCRG00000061037)	wdr75 (ENSCCRG00000019350)	ENSCCRG00000035830	ENSCCRG00000035820	ankar (ENSCCRG00000035808)	ENSCCRG00000035799	adat3 (ENSCCRG00000059088)	ormdl1 (ENSCCRG00000058116)	pms1 (ENSCCRG00000003785)	mstnb (ENSCCRG00000060576)	ENSCCRG00000071514	hibch (ENSCCRG00000055415)	pofut2 (ENSCCRG00000028565)	ENSCCRG00000028584 #21	BARD1 (ENSCCRG00000057061) #22	vwc2l (ENSCCRG00000058014) #23	IKZF2 (ENSCCRG00000080336) #25	ENSCCRG00000081516	ERBB4 (ENSCCRG00000056112) #26	CPS1 (ENSCCRG00000065144) #28	myl1 (ENSCCRG00000010677) #31	ENSCCRG00000030747 ##37	ENSCCRG00000007085 #34	ENSCCRG00000066921	heg1 (ENSCCRG00000074218)	slc12a8 (ENSCCRG00000018209)	znf148 (ENSCCRG00000018205)	snx4 (ENSCCRG00000065337)	ENSCCRG00000051685	OSBPL11 (ENSCCRG00000051686)
Goldfish	MODERN SPECIES	49	wdr75 (ENSCARG00000021781)	ENSCARG00000021828	slc40a1 (ENSCARG00000021834)	ENSCARG00000021846	asnsd1 (ENSCARG00000021864)	zgc:136439 (ENSCARG00000021879)	ankar (ENSCARG00000021908)	adat3 (ENSCARG00000021940)	ormdl1 (ENSCARG00000021945)	pms1 (ENSCARG00000021963)	mstnb (ENSCARG00000022031)	ENSCARG00000022055	hibch (ENSCARG00000022067)	pofut2 (ENSCARG00000022282)	ABCA12 (ENSCARG00000022666) #21	ENSCARG00000023056 #22	ENSCARG00000023063 #22	vwc2l (ENSCARG00000023071) #23	IKZF2 (ENSCARG00000023082) #25	ERBB4 (ENSCARG00000023135) #26	CPS1 (ENSCARG00000024007) #28	myl1 (ENSCARG00000030781) #31	MAP2 (ENSCARG00000030866) ##37	ENSCARG00000030934 #34	ENSCARG00000030947	heg1 (ENSCARG00000030968)	slc12a8 (ENSCARG00000031023)	znf148 (ENSCARG00000031055)	snx4 (ENSCARG00000031157)	ENSCARG00000032882	OSBPL11 (ENSCARG00000032901)
Zebrafish	MODERN SPECIES	24	slc40a1 (ENSDARG00000000241)	zgc:136439 (ENSDARG00000009267)	asnsd1 (ENSDARG00000000540)	ankar (ENSDARG00000000516)	osgepl1 (ENSDARG00000000651)	adat3 (ENSDARG00000005640)	ormdl1 (ENSDARG00000014333)	pms1 (ENSDARG00000000476)	mstnb (ENSDARG00000069133)	ENSDARG00000097855	hibch (ENSDARG00000054867)	pofut2 (ENSDARG00000045175)	ENSDARG00000092452	ENSDARG00000093484	ABCA12 (ENSDARG00000074749) #21	BARD1 (ENSDARG00000076733) #22	vwc2l (ENSDARG00000069134) #23	IKZF2 (ENSDARG00000069111) #25	ERBB4 (ENSDARG00000089536) #26	CPS1 (ENSDARG00000020028) #28	myl1 (ENSDARG00000014196) #31	ENSDARG00000055052	ENSDARG00000075284 #34	heg1 (ENSDARG00000018441)	slc12a8 (ENSDARG00000074384)	znf148 (ENSDARG00000055106)	snx4 (ENSDARG00000022659)	ENSDARG00000055136	OSBPL11 (ENSDARG00000076328)	LMLN (ENSDARG00000061265)	lss (ENSDARG00000061274)
Cyprinoidei	ANCESTRAL SPECIES	40	ENSGT01040000240966	ENSGT00390000007295	ENSGT00680000100065	ENSGT00390000012446	ENSGT00940000153744.A	ENSGT00390000010706	ENSGT00950000183178.b.a	ENSGT00940000157085	ENSGT00940000165813.b	ENSGT00940000167830	ENSGT00890000139491	ENSGT00390000007989	ENSGT00980000199646	ENSGT00940000157295 #21	ENSGT00940000156532.o #22	ENSGT00940000156532.p #22	ENSGT00720000108792.B #23	ENSGT00940000157137 #25	ENSGT00940000154695.d.a #26	ENSGT00940000157192 #28	ENSGT01030000234570.d.a.o #31	ENSGT00940000156597.a.a ##37	ENSGT00530000063688.a #34	ENSGT00530000065251.a.b.a	ENSGT00710000106813.A	ENSGT00940000160130	ENSGT00940000157406	ENSGT00930000151029.i.a	ENSGT00940000164835	ENSGT00940000158398	ENSGT00390000008796
Cyprininae	DUPLICATION
Cyprininae	ANCESTRAL SPECIES	181	ENSGT01040000240966.b	ENSGT00390000012446.a	ENSGT00390000007295	ENSGT00680000100065.e	ENSGT00390000012446.b	ENSGT00940000153744.A.a	ENSGT00390000010706.b	ENSGT00950000183178.b.a.d	ENSGT00940000157085.a	ENSGT00940000165813.b.a	ENSGT00940000167830.e.a	ENSGT00890000139491.l	ENSGT00390000007989.w	ENSGT00940000157295.a #21	ENSGT00940000156532.o #22	ENSGT00940000156532.p.a #22	ENSGT00720000108792.B.c #23	ENSGT00940000157137.r #25	ENSGT00940000154695.d.a.a #26	ENSGT00940000157192.f #28	ENSGT01030000234570.d.a.o.c #31	ENSGT00940000156597.a.a.b ##37	ENSGT00530000063688.a.a #34	ENSGT00530000065251.a.b.a	ENSGT00710000106813.A.cb	ENSGT00940000160130.d	ENSGT00940000157406.gb	ENSGT00930000151029.i.a.d	ENSGT00940000164835.a	ENSGT00940000158398.k
Goldfish	MODERN SPECIES	49	ENSCARG00000021828	slc40a1 (ENSCARG00000021834)	ENSCARG00000021846	asnsd1 (ENSCARG00000021864)	zgc:136439 (ENSCARG00000021879)	ankar (ENSCARG00000021908)	adat3 (ENSCARG00000021940)	ormdl1 (ENSCARG00000021945)	pms1 (ENSCARG00000021963)	mstnb (ENSCARG00000022031)	ENSCARG00000022055	hibch (ENSCARG00000022067)	pofut2 (ENSCARG00000022282)	ABCA12 (ENSCARG00000022666) #21	ENSCARG00000023056 #22	ENSCARG00000023063 #22	vwc2l (ENSCARG00000023071) #23	IKZF2 (ENSCARG00000023082) #25	ERBB4 (ENSCARG00000023135) #26	CPS1 (ENSCARG00000024007) #28	myl1 (ENSCARG00000030781) #31	MAP2 (ENSCARG00000030866) ##37	ENSCARG00000030934 #34	ENSCARG00000030947	heg1 (ENSCARG00000030968)	slc12a8 (ENSCARG00000031023)	znf148 (ENSCARG00000031055)	snx4 (ENSCARG00000031157)	ENSCARG00000032882	OSBPL11 (ENSCARG00000032901)	LMLN (ENSCARG00000033137)
Cyprininae_a	ANCESTRAL SPECIES	120	ENSGT01040000240966.b	ENSGT00390000012446.a	ENSGT00390000007295	ENSGT00680000100065.e	ENSGT00390000012446.b	ENSGT00940000153744.A.a	ENSGT00390000010706.b	ENSGT00950000183178.b.a.d	ENSGT00940000157085.a	ENSGT00940000165813.b.a	ENSGT00940000167830.e.a	ENSGT00890000139491.l	ENSGT00390000007989.w	ENSGT00940000157295.a #21	ENSGT00940000156532.o #22	ENSGT00940000156532.p.a #22	ENSGT00720000108792.B.c #23	ENSGT00940000157137.r #25	ENSGT00940000154695.d.a.a #26	ENSGT00940000157192.f #28	ENSGT01030000234570.d.a.o.c #31	ENSGT00940000156597.a.a.b ##37	ENSGT00530000063688.a.a #34	ENSGT00530000065251.a.b.a	ENSGT00710000106813.A.cb	ENSGT00940000160130.d	ENSGT00940000157406.gb	ENSGT00930000151029.i.a.d	ENSGT00940000164835.a	ENSGT00940000158398.k	ENSGT00390000008796.b
Golden-line barbel	MODERN SPECIES	319	ENSSGRG00000046138	ENSSGRG00000046137	ENSSGRG00000046136	zgc:136439 (ENSSGRG00000046134)	ankar (ENSSGRG00000046132)	osgepl1 (ENSSGRG00000046131)	adat3 (ENSSGRG00000046130)	ormdl1 (ENSSGRG00000046119)	pms1 (ENSSGRG00000045864)	mstnb (ENSSGRG00000045854)	ENSSGRG00000045852	hibch (ENSSGRG00000045851)	ENSSGRG00000045850	pofut2 (ENSSGRG00000045849)	ABCA12 (ENSSGRG00000045844) #21	ENSSGRG00000045839 #22	vwc2l (ENSSGRG00000045837) #23
Cyprininae	ANCESTRAL SPECIES	264					ENSGT00980000202973	ENSGT00680000100065.f	ENSGT00940000153744.A.b	ENSGT00390000010706.a	ENSGT00950000183178.b.a.c	ENSGT00940000157085.b	ENSGT00940000165813.b.b	ENSGT00940000167830.e.b	ENSGT00890000139491.k	ENSGT00390000007989.x	ENSGT00940000157295.b #21	ENSGT00940000156532.p.b #22	ENSGT00720000108792.B.d #23	ENSGT00940000157137.q #25	ENSGT00940000154695.d.a.b #26	ENSGT00940000157192.e #28	ENSGT01030000234570.d.a.o.d #31	ENSGT00940000156597.a.a.a ##37	ENSGT00530000063688.a.b #34	ENSGT00710000106813.A.bb.a	ENSGT00940000160130.c	ENSGT00940000157406.fb	ENSGT00930000151029.i.a.c	ENSGT00940000164835.b	ENSGT00940000158398.l	ENSGT00390000008796.a	ENSGT00390000008796.b
Cyprininae_a	ANCESTRAL SPECIES	31				ENSGT00980000202973	ENSGT00680000100065.f	ENSGT00940000153744.A.b	ENSGT00390000010706.a	ENSGT00950000183178.b.a.c	ENSGT00940000157085.b	ENSGT00940000165813.b.b	ENSGT00940000167830.e.b	ENSGT00890000139491.k	ENSGT00390000007989.x	ENSGT00940000157295.b #21	ENSGT01060000253671	ENSGT00940000156532.p.b #22	ENSGT00720000108792.B.d #23	ENSGT00940000157137.q #25	ENSGT00940000154695.d.a.b #26	ENSGT00940000157192.e #28	ENSGT01030000234570.d.a.o.d #31	ENSGT00940000156597.a.a.a ##37	ENSGT00530000063688.a.b #34	ENSGT00710000106813.A.bb.a	ENSGT00940000160130.c	ENSGT00940000157406.fb	ENSGT00930000151029.i.a.c	ENSGT00940000164835.b	ENSGT00940000158398.l	ENSGT00390000008796.a	ENSGT00390000011570
Common carp reference	MODERN SPECIES	41	stat1b (ENSCCRG00000019377)	STAT4 (ENSCCRG00000019356)	wdr75 (ENSCCRG00000069906)	slc40a1 (ENSCCRG00000035839)	zgc:136439 (ENSCCRG00000019325)	asnsd1 (ENSCCRG00000019318)	osgepl1 (ENSCCRG00000071705)	adat3 (ENSCCRG00000078318)	ormdl1 (ENSCCRG00000061988)	pms1 (ENSCCRG00000075365)	mstnb (ENSCCRG00000028516)	ENSCCRG00000077185	hibch (ENSCCRG00000028544)	ENSCCRG00000023106 #21	ENSCCRG00000054911	ENSCCRG00000044307 #22	vwc2l (ENSCCRG00000044130) #23	ENSCCRG00000061339	IKZF2 (ENSCCRG00000067957) #25	ERBB4 (ENSCCRG00000062984) #26	CPS1 (ENSCCRG00000011028) #28	myl1 (ENSCCRG00000010670) #31	ENSCCRG00000018246 ##37	ENSCCRG00000018241 #34	heg1 (ENSCCRG00000018220)	slc12a8 (ENSCCRG00000018232)	znf148 (ENSCCRG00000054529)	snx4 (ENSCCRG00000017677)	ENSCCRG00000017670	OSBPL11 (ENSCCRG00000017660)	ENSCCRG00000052654
Golden-line barbel	MODERN SPECIES	2129																ENSSGRG00000017258 #22
Goldfish	MODERN SPECIES	27	nab1b (ENSCARG00000022054)	GLS (ENSCARG00000022102)	stat1b (ENSCARG00000022577)	wdr75 (ENSCARG00000024149)	slc40a1 (ENSCARG00000024368)	ENSCARG00000024398	asnsd1 (ENSCARG00000024409)	osgepl1 (ENSCARG00000024436)	ormdl1 (ENSCARG00000024452)	pms1 (ENSCARG00000024484)	mstnb (ENSCARG00000024558)	ENSCARG00000024575	hibch (ENSCARG00000024614)	pofut2 (ENSCARG00000024877)	ABCA12 (ENSCARG00000025342) #21	ENSCARG00000026157 #22	vwc2l (ENSCARG00000026177) #23	IKZF2 (ENSCARG00000026186) #25	ERBB4 (ENSCARG00000026385) #26	myl1 (ENSCARG00000032575) #31	MAP2 (ENSCARG00000032645) ##37	heg1 (ENSCARG00000032740)	slc12a8 (ENSCARG00000032805)	znf148 (ENSCARG00000032898)	snx4 (ENSCARG00000033042)	ENSCARG00000035324	OSBPL11 (ENSCARG00000035336)	LMLN (ENSCARG00000035514)	ENSCARG00000035732	CYP27A1 (ENSCARG00000035837)	ZNF142 (ENSCARG00000036187)
Clupeiformes	ANCESTRAL SPECIES	1	ENSGT00940000164127.a	ENSGT01030000234646.B.a.a.b	ENSGT00940000155353.a.a.a	ENSGT00940000160127.g	ENSGT00940000160029.k	ENSGT00390000007069	ENSGT00940000155963.e.d	ENSGT00940000155442.o.e	ENSGT01030000235037	ENSGT00990000204171	ENSGT00390000012561.b.pb.a	ENSGT00390000007946.i.a	ENSGT00940000155752	ENSGT00390000007989	ENSGT00940000157295 #21	ENSGT00940000156532 #22	ENSGT00720000108792.B #23	ENSGT00940000157137 #25	ENSGT00940000154695.d.a #26	ENSGT00940000157192 #28	ENSGT01030000234570.d.a.o #31	ENSGT00940000156597.a.a ##37	ENSGT00530000063688.a #34	ENSGT00530000065251.a.b.a	ENSGT00970000197603	ENSGT00710000106813.A	ENSGT00940000160130	ENSGT00940000157406	ENSGT00930000151029.i.a	ENSGT00940000164835	ENSGT00940000158398
Denticle herring	DUPLICATION
Denticle herring	MODERN SPECIES	19	RAPGEF4 (ENSDCDG00000033884)	ENSDCDG00000033861	PDK1 (ENSDCDG00000033841)	ITGA6 (ENSDCDG00000033824)	dlx2a (ENSDCDG00000033820)	dlx1a (ENSDCDG00000033819)	hat1 (ENSDCDG00000033803)	SLC25A12 (ENSDCDG00000033637)	dync1i2a (ENSDCDG00000032567)	ENSDCDG00000032465	ENSDCDG00000032462	BZW1 (ENSDCDG00000032459)	MYO1B (ENSDCDG00000032365)	pofut2 (ENSDCDG00000032329)	ABCA12 (ENSDCDG00000032317) #21	ENSDCDG00000032314 #22	ENSDCDG00000032312 #22	vwc2l (ENSDCDG00000032310) #23	IKZF2 (ENSDCDG00000032306) #25	ERBB4 (ENSDCDG00000027895) #26	CPS1 (ENSDCDG00000027653) #28	myl1 (ENSDCDG00000027642) #31	ENSDCDG00000027638 ##37	ENSDCDG00000027635 #34	ENSDCDG00000027633	ENSDCDG00000027630	heg1 (ENSDCDG00000027628)	slc12a8 (ENSDCDG00000027625)	znf148 (ENSDCDG00000027623)	snx4 (ENSDCDG00000027576)	ENSDCDG00000027572
Denticle herring	MODERN SPECIES	19	ENSDCDG00000033861	PDK1 (ENSDCDG00000033841)	ITGA6 (ENSDCDG00000033824)	dlx2a (ENSDCDG00000033820)	dlx1a (ENSDCDG00000033819)	hat1 (ENSDCDG00000033803)	SLC25A12 (ENSDCDG00000033637)	dync1i2a (ENSDCDG00000032567)	ENSDCDG00000032465	ENSDCDG00000032462	BZW1 (ENSDCDG00000032459)	MYO1B (ENSDCDG00000032365)	pofut2 (ENSDCDG00000032329)	ABCA12 (ENSDCDG00000032317) #21	ENSDCDG00000032314 #22	ENSDCDG00000032312 #22	vwc2l (ENSDCDG00000032310) #23	IKZF2 (ENSDCDG00000032306) #25	ERBB4 (ENSDCDG00000027895) #26	CPS1 (ENSDCDG00000027653) #28	myl1 (ENSDCDG00000027642) #31	ENSDCDG00000027638 ##37	ENSDCDG00000027635 #34	ENSDCDG00000027633	ENSDCDG00000027630	heg1 (ENSDCDG00000027628)	slc12a8 (ENSDCDG00000027625)	znf148 (ENSDCDG00000027623)	snx4 (ENSDCDG00000027576)	ENSDCDG00000027572	OSBPL11 (ENSDCDG00000027560)
Atlantic herring	MODERN SPECIES	11	GPR155 (ENSCHAG00000026613)	ENSCHAG00000026617	PDK1 (ENSCHAG00000026633)	ITGA6 (ENSCHAG00000026661)	dlx2a (ENSCHAG00000026770)	dlx1a (ENSCHAG00000026772)	hat1 (ENSCHAG00000026776)	SLC25A12 (ENSCHAG00000026856)	dync1i2a (ENSCHAG00000027302)	ENSCHAG00000027540	BZW1 (ENSCHAG00000027546)	DHDH (ENSCHAG00000027552)	MYO1B (ENSCHAG00000027596)	pofut2 (ENSCHAG00000027648)	ABCA12 (ENSCHAG00000027652) #21	ENSCHAG00000027653 #22	vwc2l (ENSCHAG00000027654) #23	ENSCHAG00000027655	IKZF2 (ENSCHAG00000027657) #25	ERBB4 (ENSCHAG00000027690) #26	CPS1 (ENSCHAG00000027784) #28	myl1 (ENSCHAG00000027823) #31	ENSCHAG00000027824 ##37	ENSCHAG00000027826	heg1 (ENSCHAG00000027827)	slc12a8 (ENSCHAG00000027830)	znf148 (ENSCHAG00000027831)	snx4 (ENSCHAG00000027832)	ENSCHAG00000027833	OSBPL11 (ENSCHAG00000000727)	LMLN (ENSCHAG00000000897)
Euteleosteomorpha	ANCESTRAL SPECIES	232										ENSGT00390000012561.b.pb.a	ENSGT00390000007946.i.a	ENSGT00940000155752	ENSGT00390000007989	ENSGT00980000199646	ENSGT00940000157295 #21	ENSGT00940000156532 #22	ENSGT00720000108792.B #23	ENSGT00940000157137 #25	ENSGT00940000154695.d.a #26	ENSGT00940000157192 #28	ENSGT01030000234570.d.a.o #31	ENSGT00940000156597.a.a ##37	ENSGT00770000121792	ENSGT00530000063688.a #34	ENSGT00530000065251	ENSGT00710000106813.A	ENSGT00940000160130	ENSGT00940000157406	ENSGT00930000151029.i.a	ENSGT00940000164835	ENSGT00940000167716
Protacanthopterygii	ANCESTRAL SPECIES	18	ENSGT00940000165301.a	ENSGT00390000011515	ENSGT00940000154817.b.a	ENSGT00940000159158	ENSGT00390000013973.A.a.c.a	ENSGT00940000159213.q.a	ENSGT00940000159862.a	ENSGT00940000165735	ENSGT00940000155984.i.a.a	ENSGT00940000157521.a.a	ENSGT00390000012561.b.pb.a	ENSGT00390000007946.i.a	ENSGT00940000155752	ENSGT00390000007989	ENSGT00940000157295 #21	ENSGT00940000156532 #22	ENSGT00720000108792.B #23	ENSGT00940000157137 #25	ENSGT00940000154695.d.a #26	ENSGT00940000157192 #28	ENSGT01030000234570.d.a.o #31	ENSGT00940000156597.a.a ##37	ENSGT00770000121792	ENSGT00530000063688.a #34	ENSGT00530000065251	ENSGT00710000106813.A	ENSGT00940000160130
Northern pike	MODERN SPECIES	15	tfcp2l1 (ENSELUG00000007801)	ENSELUG00000030218	ENSELUG00000031421	gli2a (ENSELUG00000007884)	inhbb (ENSELUG00000007919)	ENSELUG00000027546	ENSELUG00000007944	LRP1B (ENSELUG00000029801)	ENSELUG00000031151	ENSELUG00000034188	ENSELUG00000033010	BZW1 (ENSELUG00000008110)	MYO1B (ENSELUG00000008161)	pofut2 (ENSELUG00000008188)	ABCA12 (ENSELUG00000008398) #21	ENSELUG00000008469 #22	vwc2l (ENSELUG00000008497) #23	ENSELUG00000024888	LCT (ENSELUG00000008584)	gjc4b (ENSELUG00000008615)	ddx18 (ENSELUG00000008640)	ENSELUG00000008667	ENSELUG00000008743	actr3 (ENSELUG00000008916)	SLC35F5 (ENSELUG00000008979)	gpr39 (ENSELUG00000009008)	ENSELUG00000009018	ENSELUG00000008997	LYPD1 (ENSELUG00000009030)	ENSELUG00000009095	ftcdnl1 (ENSELUG00000009151)
Salmoninae	ANCESTRAL SPECIES	446												ENSGT00940000157521.a.a.h	ENSGT00390000012561.b.pb.a.d	ENSGT00940000155752.m	ENSGT00390000007989.z	ENSGT00940000156532 #22	ENSGT00720000108792.B.b #23	ENSGT00940000157137.t #25	ENSGT00940000154695.d.a.j.b #26	ENSGT01030000234570.d.a.o.a #31	ENSGT00940000156597.a.a.f ##37	ENSGT00770000121792.a.a	ENSGT00770000121792.b	ENSGT00530000063688.a.d #34	ENSGT00710000106813.A.ab	ENSGT00940000157406.hb	ENSGT00930000151029.i.a.b	ENSGT00940000164835.c	ENSGT00390000008796.d	ENSGT01100000263532.C.c.b.o.b.b	ENSGT01100000263523.A.z.c.b.b
Huchen	MODERN SPECIES	165												BZW1 (ENSHHUG00000012238)	MYO1B (ENSHHUG00000011699)	pofut2 (ENSHHUG00000011646)	ENSHHUG00000011641	BARD1 (ENSHHUG00000011633) #22	vwc2l (ENSHHUG00000011623) #23	ENSHHUG00000011617	IKZF2 (ENSHHUG00000011611) #25	ENSHHUG00000011607 #26
Salmoninae_a	ANCESTRAL SPECIES		ENSGT00940000156507.p	ENSGT00950000182905.a.a.a.a.a.a.d.b	ENSGT00390000017724.a.b.e	ENSGT00940000164632.a.a	ENSGT00940000153568.B.q	ENSGT00390000011515.w	ENSGT00940000154817.b.a.g	ENSGT00940000159158.i	ENSGT00940000159213.q.a.b	ENSGT00940000159862.a.f	ENSGT00940000155984.i.a.a.b	ENSGT00940000157521.a.a.h	ENSGT00390000012561.b.pb.a.d	ENSGT00940000155752.m	ENSGT00390000007989.z	ENSGT00940000156532 #22	ENSGT00720000108792.B.b #23	ENSGT00940000157137.t #25	ENSGT00940000154695.d.a.j.b #26	ENSGT01030000234570.d.a.o.a #31	ENSGT00940000156597.a.a.f ##37	ENSGT00770000121792.a.a	ENSGT00530000063688.a.d #34	ENSGT00710000106813.A.ab	ENSGT00940000157406.hb	ENSGT00930000151029.i.a.b	ENSGT00940000164835.c	ENSGT00390000008796.d	ENSGT01100000263532.C.c.b.o.b.b	ENSGT01100000263532.A.a.a.a.a.a.r	ENSGT01100000263532.A.a.b.c
Oncorhynchus	ANCESTRAL SPECIES	13	ENSGT00940000156507.p	ENSGT00950000182905.a.a.a.a.a.a.d.b	ENSGT00390000017724.a.b.e	ENSGT00940000164632.a.a	ENSGT00940000153568.B.q	ENSGT00390000011515.w	ENSGT00940000154817.b.a.g	ENSGT00940000159158.i	ENSGT00940000159213.q.a.b	ENSGT00940000159862.a.f	ENSGT00940000155984.i.a.a.b	ENSGT00940000157521.a.a.h	ENSGT00390000012561.b.pb.a.d	ENSGT00940000155752.m	ENSGT00390000007989.z	ENSGT00940000156532 #22	ENSGT00720000108792.B.b #23	ENSGT00940000157137.t #25	ENSGT00940000154695.d.a.j.b #26	ENSGT01030000234570.d.a.o.a #31	ENSGT00940000156597.a.a.f ##37	ENSGT00770000121792.a.a	ENSGT00530000063688.a.d #34	ENSGT00710000106813.A.ab	ENSGT00940000157406.hb	ENSGT00930000151029.i.a.b	ENSGT00940000164835.c	ENSGT00390000008796.d	ENSGT01100000263532.A.a.a.a.a.a.s	ENSGT01100000263532.B	ENSGT01100000263523.A.z.c.b.a.a
Oncorhynchus_a	ANCESTRAL SPECIES	11	ENSGT00940000156507.p	ENSGT00950000182905.a.a.a.a.a.a.d.b	ENSGT00390000017724.a.b.e	ENSGT00940000164632.a.a	ENSGT00940000153568.B.q	ENSGT00390000011515.w	ENSGT00940000154817.b.a.g	ENSGT00940000159158.i	ENSGT00940000159213.q.a.b	ENSGT00940000159862.a.f	ENSGT00940000155984.i.a.a.b	ENSGT00940000157521.a.a.h	ENSGT00390000012561.b.pb.a.d	ENSGT00940000155752.m	ENSGT00390000007989.z	ENSGT00940000156532 #22	ENSGT00720000108792.B.b #23	ENSGT00940000157137.t #25	ENSGT00940000154695.d.a.j.b #26	ENSGT01030000234570.d.a.o.a #31	ENSGT00940000156597.a.a.f ##37	ENSGT00770000121792.a.a	ENSGT00530000063688.a.d #34	ENSGT00710000106813.A.ab	ENSGT00940000157406.hb	ENSGT00930000151029.i.a.b	ENSGT00940000164835.c	ENSGT00390000008796.d	ENSGT01100000263523.E	ENSGT01100000263523.J	ENSGT01100000263532.A.a.a.b.b.b
Coho salmon	MODERN SPECIES	18	eaf2 (ENSOKIG00005032556)	si:dkey-91i10.2 (ENSOKIG00005032548)	tsn (ENSOKIG00005032530)	nifk (ENSOKIG00005032513)	ENSOKIG00005031577	tfcp2l1 (ENSOKIG00005031473)	GLI2 (ENSOKIG00005031178)	INHBB (ENSOKIG00005031057)	RALB (ENSOKIG00005031005)	ENSOKIG00005022751	BZW1 (ENSOKIG00005021431)	ENSOKIG00005021394	MYO1B (ENSOKIG00005020087)	pofut2 (ENSOKIG00005019945)	ENSOKIG00005019940	BARD1 (ENSOKIG00005019912) #22	vwc2l (ENSOKIG00005019891) #23	IKZF2 (ENSOKIG00005019879) #25	ERBB4 (ENSOKIG00005019215) #26	ENSOKIG00005019154	myl1 (ENSOKIG00005019142) #31	ENSOKIG00005019092 ##37	ENSOKIG00005019071 ##37	ENSOKIG00005019043 #34	heg1 (ENSOKIG00005019020)	znf148 (ENSOKIG00005018892)	snx4 (ENSOKIG00005018706)	ENSOKIG00005018688	LMLN (ENSOKIG00005018512)	ENSOKIG00005018467	ENSOKIG00005018450
Chinook salmon	MODERN SPECIES	18	slc15a2 (ENSOTSG00005043950)	ENSOTSG00005043941	eaf2 (ENSOTSG00005043940)	si:dkey-91i10.2 (ENSOTSG00005043938)	tsn (ENSOTSG00005043936)	ENSOTSG00005043934	nifk (ENSOTSG00005043929)	clasp1a (ENSOTSG00005034742)	tfcp2l1 (ENSOTSG00005034695)	gli2a (ENSOTSG00005034692)	inhbb (ENSOTSG00005034690)	RALB (ENSOTSG00005034689)	ENSOTSG00005028903	BZW1 (ENSOTSG00005028405)	MYO1B (ENSOTSG00005019751)	BARD1 (ENSOTSG00005019745) #22	vwc2l (ENSOTSG00005019744) #23	IKZF2 (ENSOTSG00005019743) #25	ERBB4 (ENSOTSG00005013479) #26	myl1 (ENSOTSG00005013450) #31	ENSOTSG00005013444 ##37	ENSOTSG00005013439	ENSOTSG00005013436 #34	heg1 (ENSOTSG00005013430)	znf148 (ENSOTSG00005013401)	snx4 (ENSOTSG00005012076)	ENSOTSG00005012070	LMLN (ENSOTSG00005012030)	ENSOTSG00005012025	ENSOTSG00005012024	ENSOTSG00005012022
Rainbow trout	MODERN SPECIES	14	eaf2 (ENSOMYG00000042087)	ENSOMYG00000068681	tsn (ENSOMYG00000042057)	nifk (ENSOMYG00000042040)	ENSOMYG00000029651	tfcp2l1 (ENSOMYG00000027202)	ENSOMYG00000049337	ENSOMYG00000027133	ENSOMYG00000027098	ENSOMYG00000027060	ENSOMYG00000024665	ENSOMYG00000023230	ENSOMYG00000022408	pofut2 (ENSOMYG00000021962)	ENSOMYG00000072433	BARD1 (ENSOMYG00000021916) #22	vwc2l (ENSOMYG00000021864) #23	ENSOMYG00000051011	IKZF2 (ENSOMYG00000021843) #25	ERBB4 (ENSOMYG00000021728) #26	myl1 (ENSOMYG00000021585) #31	ENSOMYG00000056290 ##37	ENSOMYG00000021565 ##37	ENSOMYG00000021546 #34	heg1 (ENSOMYG00000021522)	znf148 (ENSOMYG00000021482)	snx4 (ENSOMYG00000021138)	ENSOMYG00000021046	ENSOMYG00000052352	ENSOMYG00000020889	TTN (ENSOMYG00000060349)
Salmo	ANCESTRAL SPECIES	10	ENSGT00940000156507.p	ENSGT00950000182905.a.a.a.a.a.a.d.b	ENSGT00390000017724.a.b.e	ENSGT00940000164632.a.a	ENSGT00940000153568.B.q	ENSGT00390000011515.w	ENSGT00940000154817.b.a.g	ENSGT00940000159158.i	ENSGT00940000155925.j.b.a	ENSGT00940000159862.a.f	ENSGT00940000155984.i.a.a.b	ENSGT00940000157521.a.a.h	ENSGT00390000012561.b.pb.a.d.a	ENSGT00940000155752.m	ENSGT00390000007989.z	ENSGT00940000156532 #22	ENSGT00720000108792.B.b #23	ENSGT00940000157137.t #25	ENSGT00940000154695.d.a.j.a.a #26	ENSGT01030000234570.d.a.o.a #31	ENSGT00940000156597.a.b.b.b ##37	ENSGT00770000121792.b	ENSGT00530000063688.a.d #34	ENSGT00710000106813.A.ab	ENSGT00940000157406.hb	ENSGT00930000151029.i.a.b	ENSGT00940000164835.c	ENSGT00390000008796.d	ENSGT01100000263532.C.c.b.o.b.b	ENSGT01100000263532.A.a.a.b.b.a.b	ENSGT01100000263523.A.z.c.b.b
River trout	MODERN SPECIES	12	slc15a2 (ENSSTUG00000046394)	cyp27a3 (ENSSTUG00000046565)	eaf2 (ENSSTUG00000046573)	tsn (ENSSTUG00000046579)	nifk (ENSSTUG00000046587)	clasp1a (ENSSTUG00000046697)	tfcp2l1 (ENSSTUG00000048305)	ENSSTUG00000048404	ENSSTUG00000048414	inhbb (ENSSTUG00000048417)	RALB (ENSSTUG00000048441)	LRP1B (ENSSTUG00000048638)	BZW1 (ENSSTUG00000049832)	MYO1B (ENSSTUG00000049902)	pofut2 (ENSSTUG00000050133)	BARD1 (ENSSTUG00000050169) #22	vwc2l (ENSSTUG00000050173) #23	IKZF2 (ENSSTUG00000050176) #25	ERBB4 (ENSSTUG00000050216) #26	myl1 (ENSSTUG00000050417) #31	ENSSTUG00000050424 ##37	ENSSTUG00000050428	ENSSTUG00000050429 #34	heg1 (ENSSTUG00000050435)	znf148 (ENSSTUG00000050441)	snx4 (ENSSTUG00000050459)	ENSSTUG00000050501	LMLN (ENSSTUG00000050510)	ENSSTUG00000050546	ENSSTUG00000050550	ENSSTUG00000050560
Atlantic salmon	DUPLICATION
Atlantic salmon	MODERN SPECIES	6	ENSSSAG00000121747	ENSSSAG00000045445	ENSSSAG00000045448	ENSSSAG00000045472	ENSSSAG00000045588	FXN (ENSSSAG00000121927)	TJP2 (ENSSSAG00000045631)	APBA1 (ENSSSAG00000099740)	PTAR1 (ENSSSAG00000048789)	ENSSSAG00000091755	CFAP95 (ENSSSAG00000105999)	mamdc2a (ENSSSAG00000048808)	ENSSSAG00000048862	ENSSSAG00000048881	HMGCR (ENSSSAG00000049070)	ENSSSAG00000097330 #22	ENSSSAG00000094394	ENSSSAG00000112425	ENSSSAG00000053787	GCNT4 (ENSSSAG00000039354)	ENSSSAG00000121417	ENSSSAG00000039476	ENSSSAG00000111030	ENSSSAG00000039677	ENSSSAG00000039717	ENSSSAG00000114974	ENSSSAG00000112001	ENSSSAG00000039752	ENSSSAG00000090325	ENSSSAG00000039900	ENSSSAG00000090002
Atlantic salmon	MODERN SPECIES	13	hspbap1 (ENSSSAG00000079248)	slc15a2 (ENSSSAG00000079180)	ENSSSAG00000079169	eaf2 (ENSSSAG00000079164)	si:dkey-91i10.2 (ENSSSAG00000079159)	tsn (ENSSSAG00000085312)	ENSSSAG00000084634	ENSSSAG00000112678	ENSSSAG00000065361	ENSSSAG00000080302	ENSSSAG00000098007	ENSSSAG00000064387	ENSSSAG00000064197	ENSSSAG00000059799	pofut2 (ENSSSAG00000059086)	BARD1 (ENSSSAG00000059003) #22	vwc2l (ENSSSAG00000058962) #23	IKZF2 (ENSSSAG00000058344) #25	ERBB4 (ENSSSAG00000049188) #26	myl1 (ENSSSAG00000048886) #31	ENSSSAG00000096922 ##37	ENSSSAG00000048794 #34	ENSSSAG00000083816	heg1 (ENSSSAG00000048774)	znf148 (ENSSSAG00000048762)	snx4 (ENSSSAG00000048529)	ENSSSAG00000048286	ENSSSAG00000048250	ENSSSAG00000048119	TTN (ENSSSAG00000105866)	TTN (ENSSSAG00000119643)
Acanthomorphata	ANCESTRAL SPECIES	51	ENSGT00910000144271.C	ENSGT00390000007467	ENSGT00390000016696	ENSGT00950000182906.b.b	ENSGT00940000158318	ENSGT00940000163874	ENSGT00390000007644	ENSGT00940000155984.i.a	ENSGT00940000157521.a.a	ENSGT00390000012561.b.pb.a	ENSGT00940000155752	ENSGT00390000007946.i.a	ENSGT00390000007989	ENSGT00980000199646	ENSGT00940000157295 #21	ENSGT00940000156532 #22	ENSGT00720000108792.B #23	ENSGT00940000157137 #25	ENSGT00940000154695.d.a #26	ENSGT00940000157192 #28	ENSGT01030000234570.d.a.o #31	ENSGT00940000156597.a.a ##37	ENSGT00770000121792	ENSGT00530000063688.a #34	ENSGT00530000065251	ENSGT00710000106813.A	ENSGT00940000160130	ENSGT00940000157406	ENSGT00940000158191.b	ENSGT00940000161561	ENSGT00440000039314.a
Cod	MODERN SPECIES	12	ENSGMOG00000027698	ENSGMOG00000001883	ENSGMOG00000004804	ENSGMOG00000036567	ENSGMOG00000035329	ENSGMOG00000027009	ENSGMOG00000034119	ENSGMOG00000033606	ENSGMOG00000002328	ENSGMOG00000002379	ENSGMOG00000002399	ENSGMOG00000029204	ENSGMOG00000002472	pofut2 (ENSGMOG00000012820)	ABCA12 (ENSGMOG00000012822) #21	BARD1 (ENSGMOG00000027836) #22	vwc2l (ENSGMOG00000012842) #23	IKZF2 (ENSGMOG00000033404) #25	ERBB4 (ENSGMOG00000000227) #26	ENSGMOG00000033768	CPS1 (ENSGMOG00000000243) #28	myl1 (ENSGMOG00000000267) #31	ENSGMOG00000035530 ##37	ENSGMOG00000034415 #34	ENSGMOG00000019761	ENSGMOG00000031006	heg1 (ENSGMOG00000000286)	slc12a8 (ENSGMOG00000000303)	znf148 (ENSGMOG00000000320)	asmt (ENSGMOG00000000351)	akap17a (ENSGMOG00000000362)
Euacanthomorphacea	ANCESTRAL SPECIES	35	ENSGT00950000182906.b.b	ENSGT00940000158318	ENSGT00940000163874	ENSGT00390000007644	ENSGT00940000155984.i.a	ENSGT00900000141555	ENSGT00970000196932	ENSGT00940000166603	ENSGT00940000157521.a.a	ENSGT00390000012561.b.pb.a	ENSGT00940000155752	ENSGT00390000007946.i.a	ENSGT00390000007989	ENSGT00980000199646	ENSGT00940000157295 #21	ENSGT00940000156532 #22	ENSGT00720000108792.B #23	ENSGT00940000157137 #25	ENSGT00940000154695.d.a #26	ENSGT00940000157192 #28	ENSGT01030000234570.d.a.o #31	ENSGT00940000156597.a.a ##37	ENSGT00770000121792	ENSGT00530000063688.a #34	ENSGT00530000065251	ENSGT00710000106813.A	ENSGT00940000160130	ENSGT00940000157406	ENSGT00940000158191.b	ENSGT00940000161561	ENSGT00440000039314.a
Pinecone sodierfish	MODERN SPECIES	13	CNTNAP5 (ENSMMDG00005020987)	ENSMMDG00005021013	sh3bp4 (ENSMMDG00005021015)	arl4cb (ENSMMDG00005021019)	nepro (ENSMMDG00005021027)	ENSMMDG00005021029	ENSMMDG00005021030	ENSMMDG00005021033	ENSMMDG00005021036	ENSMMDG00005021037	BZW1 (ENSMMDG00005021044)	MYO1B (ENSMMDG00005021075)	DHDH (ENSMMDG00005021497)	pofut2 (ENSMMDG00005021500)	ABCA12 (ENSMMDG00005021510) #21	BARD1 (ENSMMDG00005021515) #22	vwc2l (ENSMMDG00005021520) #23	IKZF2 (ENSMMDG00005021530) #25	ERBB4 (ENSMMDG00005021557) #26	CPS1 (ENSMMDG00005021634) #28	myl1 (ENSMMDG00005023877) #31	ENSMMDG00005023878 ##37	ENSMMDG00005023880	ENSMMDG00005023881 #34	ENSMMDG00005023884	ENSMMDG00005023885	heg1 (ENSMMDG00005023888)	slc12a8 (ENSMMDG00005023892)	znf148 (ENSMMDG00005023895)	ENSMMDG00005023899	asmt (ENSMMDG00005023902)
Percomorphaceae	ANCESTRAL SPECIES	48												ENSGT00390000007946.i.a	ENSGT00390000007989	ENSGT00980000199646	ENSGT00940000157295 #21	ENSGT00940000156532 #22	ENSGT00720000108792.B #23	ENSGT00940000157137 #25	ENSGT00940000154695.d.a #26	ENSGT00940000157192 #28	ENSGT01030000234570.d.a.o #31	ENSGT00940000156597.a.a ##37	ENSGT00770000121792	ENSGT00530000063688.a #34	ENSGT00530000065251	ENSGT00710000106813.A	ENSGT00940000160130	ENSGT00940000157406	ENSGT00940000158191.b	ENSGT00940000161561	ENSGT00440000039314.a
Tiger tail seahorse	MODERN SPECIES	456	zgc:101559 (ENSHCOG00000009133)	ENSHCOG00000009125	slain1a (ENSHCOG00000009114)	ENSHCOG00000009072	ENSHCOG00000009046	ENSHCOG00000009032	ENSHCOG00000009014	fbxl3a (ENSHCOG00000008988)	CLN5 (ENSHCOG00000008983)	zgc:162944 (ENSHCOG00000008978)	zgc:162944 (ENSHCOG00000008958)	acod1 (ENSHCOG00000008903)	pofut2 (ENSHCOG00000008899)	ENSHCOG00000008876	ENSHCOG00000008856 #21	ENSHCOG00000008843 #22	IKZF2 (ENSHCOG00000008836) #25	vwc2l (ENSHCOG00000008822) #23	ERBB4 (ENSHCOG00000008801) #26	CPS1 (ENSHCOG00000008621) #28	myl1 (ENSHCOG00000008563) #31	ENSHCOG00000008552 ##37	ENSHCOG00000008526	heg1 (ENSHCOG00000008515)	slc12a8 (ENSHCOG00000008496)	znf148 (ENSHCOG00000008462)	ENSHCOG00000008455	asmt (ENSHCOG00000008412)	akap17a (ENSHCOG00000008365)	SOWAHC (ENSHCOG00000008320)	septin10 (ENSHCOG00000008307)
Percomorphaceae_B	ANCESTRAL SPECIES	17	ENSGT00940000156607.a.b	ENSGT00940000159942.a.c.b	ENSGT00940000161140	ENSGT00940000177459	ENSGT00930000151029.i.a	ENSGT00940000164444.a	ENSGT00950000182882.A.b.b.e	ENSGT00390000016940.c.b.a	ENSGT00940000155522.g.a	ENSGT00940000154095.b.b.a.b	ENSGT00940000160220	ENSGT00950000183165.b.a.e.b.d.a.a.a.a	ENSGT00950000183165.a.a.b	ENSGT00390000007989	ENSGT00940000157295 #21	ENSGT00940000156532 #22	ENSGT00720000108792.B #23	ENSGT00940000157137 #25	ENSGT00940000154695.d.a #26	ENSGT00940000157192 #28	ENSGT01030000234570.d.a.o #31	ENSGT00940000156597.a.a ##37	ENSGT00770000121792	ENSGT00530000063688.a #34	ENSGT00530000065251	ENSGT00710000106813.A	ENSGT00940000160130	ENSGT00940000157406	ENSGT00940000158191.b	ENSGT00940000161561	ENSGT00440000039314.a
Ovalentaria	ANCESTRAL SPECIES	14	ENSGT00940000159942.a.c.b	ENSGT00940000161140	ENSGT00940000177459	ENSGT00930000151029.i.a	ENSGT00940000164444.a	ENSGT00950000182882.A.b.b.e	ENSGT00390000016940.c.b.a	ENSGT00940000155522.g.a	ENSGT00940000154095.b.b.a.b	ENSGT00940000160220	ENSGT00950000183165.b.a.e.b.d.a.a.a.a	ENSGT00950000183165.b.a.e.b.d.a.a.a.b	ENSGT00950000183165.a.a.b	ENSGT00390000007989	ENSGT00940000157295 #21	ENSGT00940000156532 #22	ENSGT00720000108792.B #23	ENSGT00940000157137 #25	ENSGT00940000154695.d.a #26	ENSGT00940000157192 #28	ENSGT01030000234570.d.a.o #31	ENSGT00940000156597.a.a ##37	ENSGT00770000121792	ENSGT00530000063688.a #34	ENSGT00530000065251	ENSGT00710000106813.A	ENSGT00940000160130	ENSGT00940000157406	ENSGT00940000158191.b	ENSGT00940000161561	ENSGT00440000039314.a
Atherinomorphae	ANCESTRAL SPECIES	13	ENSGT00940000164444.a	ENSGT00950000182882.A.b.b.e	ENSGT00390000016940.c.b.a	ENSGT00940000155522.g.a	ENSGT00940000154095.b.b.a.b	ENSGT00940000166954	ENSGT00950000183165.b.a.e.b.d.a.a.a.a	ENSGT00950000183165.b.b.b.b	ENSGT00940000169984	ENSGT00940000160220	ENSGT00950000183165.b.a.e.b.d.a.b	ENSGT00950000183165.b.a.e.b.d.a.a.a.b	ENSGT00950000183165.a.a.b	ENSGT00390000007989	ENSGT00940000157295 #21	ENSGT00940000156532 #22	ENSGT00720000108792.B #23	ENSGT00940000157137 #25	ENSGT00940000154695.d.a #26	ENSGT00940000157192 #28	ENSGT01030000234570.d.a.o #31	ENSGT00940000156597.a.a ##37	ENSGT00770000121792	ENSGT00530000063688.a #34	ENSGT00710000106813.A	ENSGT00940000160130	ENSGT00940000157406	ENSGT00940000158191.b	ENSGT00940000161561	ENSGT00440000039314.a	ENSGT00950000183003.a.a.b.c.b
Cyprinodontiformes	ANCESTRAL SPECIES	15	ENSGT00950000182882.A.b.b.e	ENSGT00390000016940.c.b.a	ENSGT00940000155522.g.a	ENSGT00940000154095.b.b.a.b	ENSGT00940000166954	ENSGT00950000183165.b.a.e.b.d.a.a.a.a	ENSGT00950000183165.b.b.b.b	ENSGT00950000183165.b.a.e.b.d.a.a.a.b	ENSGT00950000183165.a.b	ENSGT00940000169984	ENSGT00940000160220	ENSGT00950000183165.b.a.e.b.d.a.b	ENSGT00950000183165.a.a.b	ENSGT00390000007989	ENSGT00940000157295 #21	ENSGT00940000156532 #22	ENSGT00720000108792.B #23	ENSGT00940000157137 #25	ENSGT00940000154695.d.a #26	ENSGT00940000157192 #28	ENSGT01030000234570.d.a.o #31	ENSGT00940000156597.a.a ##37	ENSGT00770000121792	ENSGT00530000063688.a #34	ENSGT00710000106813.A	ENSGT00940000160130	ENSGT00940000157406	ENSGT00940000158191.b	ENSGT00940000161561	ENSGT00440000039314.a	ENSGT00950000183003.a.a.b.c.b
Aplocheiloidei	ANCESTRAL SPECIES	6	ENSGT00930000151029.i.a	ENSGT00940000164444.a	ENSGT00950000182882.A.b.b.e	ENSGT00390000016940.c.b.a	ENSGT00940000155522.g.a	ENSGT00940000154095.b.b.a.b	ENSGT00940000166954	ENSGT00950000183165.b.a.e.b.d.a.a.a.a	ENSGT00950000183165.b.a.e.b.d.a.a.a.b	ENSGT00950000183165.a.b	ENSGT00940000160220	ENSGT00950000183165.b.a.e.b.d.a.b	ENSGT00950000183165.a.a.b	ENSGT00390000007989	ENSGT00940000157295 #21	ENSGT00940000156532 #22	ENSGT00720000108792.B #23	ENSGT00940000157137 #25	ENSGT00940000154695.d.a #26	ENSGT00940000157192 #28	ENSGT01030000234570.d.a.o #31	ENSGT00940000156597.a.a ##37	ENSGT00530000063688.a #34	ENSGT00940000160130	ENSGT00940000157406	ENSGT00940000158191.b	ENSGT00940000161561	ENSGT00440000039314.a	ENSGT00950000183003.a.a.b.c.b	ENSGT00940000155238	ENSGT00940000160405
Mangrove rivulus	MODERN SPECIES	74	ENSKMAG00000020345	ENSKMAG00000020373	ENSKMAG00000020387	ARSD (ENSKMAG00000020410)	snx4 (ENSKMAG00000020430)	ihha (ENSKMAG00000020452)	BIN1 (ENSKMAG00000020496)	ENSKMAG00000020565	desma (ENSKMAG00000020600)	ptprna (ENSKMAG00000020634)	DNAJB2 (ENSKMAG00000020695)	tuba8l3 (ENSKMAG00000020723)	TUBA4A (ENSKMAG00000020741)	pofut2 (ENSKMAG00000020758)	ABCA12 (ENSKMAG00000020788) #21	BARD1 (ENSKMAG00000020864) #22	vwc2l (ENSKMAG00000020877) #23	IKZF2 (ENSKMAG00000020894) #25	ENSKMAG00000020911 #26	ENSKMAG00000020922 #26	ENSKMAG00000020958 #26	CPS1 (ENSKMAG00000021008) #28	myl1 (ENSKMAG00000021142) #31	ENSKMAG00000021166 ##37	ENSKMAG00000021196 #34	ENSKMAG00000021223	slc12a8 (ENSKMAG00000021232)	znf148 (ENSKMAG00000021244)	ENSKMAG00000021258	asmt (ENSKMAG00000021265)	akap17a (ENSKMAG00000021272)
Turquoise killifish	MODERN SPECIES	1623	ENSNFUG00015018121	ENSNFUG00015018103	SNX4 (ENSNFUG00015017979)	ihha (ENSNFUG00015017968)	ENSNFUG00015015479	TMEM198A (ENSNFUG00015015333)	desma (ENSNFUG00015014918)	PTPRNA (ENSNFUG00015014649)	ENSNFUG00015014592	ENSNFUG00015014572	tuba8l5 (ENSNFUG00015014524)	TUBA4A (ENSNFUG00015014516)	pofut2 (ENSNFUG00015014376)	ABCA12 (ENSNFUG00015014057) #21	ENSNFUG00015025306	BARD1 (ENSNFUG00015025304) #22	VWC2L (ENSNFUG00015025303) #23	ENSNFUG00015025302	IKZF2 (ENSNFUG00015025301) #25	ENSNFUG00015025300	ERBB4 (ENSNFUG00015025281) #26	asmt (ENSNFUG00015025257)	AKAP17A (ENSNFUG00015025255)	SOWAHC (ENSNFUG00015025254)	SEPT10 (ENSNFUG00015025242)	ENSNFUG00015025225	SH3RF3 (ENSNFUG00015025224)	EDAR (ENSNFUG00015025222)	ENSNFUG00015025221	ENSNFUG00015025219	ENSNFUG00015025218
Cyprinodontoidei	ANCESTRAL SPECIES	13	ENSGT00940000165332.B	ENSGT00940000160683	ENSGT00390000011275	ENSGT00940000156607.a.b	ENSGT00940000159942.a.c.b	ENSGT00940000161140	ENSGT00930000151029.i.a	ENSGT00940000164444.a	ENSGT00950000182882.A.b.b.e	ENSGT00390000016940.c.b.a	ENSGT00940000155522.g.a	ENSGT00940000154095.b.b.a.b	ENSGT00940000154205	ENSGT00390000007989	ENSGT00940000157295 #21	ENSGT00940000156532 #22	ENSGT00720000108792.B #23	ENSGT00940000157137 #25	ENSGT00940000154695.d.a #26	ENSGT00940000157192 #28	ENSGT01030000234570.d.a.o #31	ENSGT00940000156597.a.a ##37	ENSGT00770000121792	ENSGT00530000063688.a #34	ENSGT00710000106813.A	ENSGT00940000160130	ENSGT00940000157406	ENSGT00940000158191.b	ENSGT00940000161561	ENSGT00440000039314.a	ENSGT00950000183003.a.a.b.c.b
Poeciliinae	ANCESTRAL SPECIES	25	ENSGT00940000161140	ENSGT00930000151029.i.a	ENSGT00940000164444.a	ENSGT00950000182882.A.b.b.e	ENSGT00390000016940.c.b.a	ENSGT00940000155522.g.a	ENSGT00940000154095.b.b.a.b	ENSGT00940000167284	ENSGT00940000154205	ENSGT00950000183165.b.a.e.b.d.a.a.a.a	ENSGT00940000169984	ENSGT00940000160220	ENSGT00950000183165.b.a.e.b.d.a.a.a.b	ENSGT00390000007989	ENSGT00940000157295 #21	ENSGT00940000156532 #22	ENSGT00720000108792.B #23	ENSGT00940000157137 #25	ENSGT00940000154695.d.a #26	ENSGT00940000157192 #28	ENSGT01030000234570.d.a.o #31	ENSGT00940000156597.a.a ##37	ENSGT00770000121792	ENSGT00530000063688.a #34	ENSGT00710000106813.A	ENSGT00940000160130	ENSGT00940000157406	ENSGT00940000158191.b	ENSGT00940000161561	ENSGT00440000039314.a	ENSGT00950000183003.a.a.b.c.b
Poecilia	ANCESTRAL SPECIES	13	ENSGT00940000160683	ENSGT00390000011275	ENSGT00940000156607.a.b	ENSGT00940000159942.a.c.b.f	ENSGT00940000161140	ENSGT00930000151029.i.a	ENSGT00940000164444.a	ENSGT00950000182882.A.b.b.e	ENSGT00390000016940.c.b.a	ENSGT00940000155522.g.a	ENSGT00940000154095.b.b.a.b	ENSGT00940000160220	ENSGT00950000183165.b.a.e.b.d.a.a.a.b	ENSGT00390000007989	ENSGT00940000157295 #21	ENSGT00940000156532 #22	ENSGT00720000108792.B #23	ENSGT00940000157137 #25	ENSGT00940000154695.d.a #26	ENSGT00940000157192 #28	ENSGT01030000234570.d.a.o #31	ENSGT00940000156597.a.a ##37	ENSGT00770000121792	ENSGT00530000063688.a #34	ENSGT00710000106813.A	ENSGT00940000160130	ENSGT00940000157406	ENSGT00940000158191.b	ENSGT00940000161561	ENSGT00440000039314.a	ENSGT00950000183003.a.a.b.c.b
NAME_6	ANCESTRAL SPECIES	401											ENSGT00940000154095.b.b.a.b	ENSGT00940000160220	ENSGT00950000183165.b.a.e.b.d.a.a.a.b	ENSGT00390000007989	ENSGT00940000157295 #21	ENSGT00940000156532 #22	ENSGT00720000108792.B #23	ENSGT00940000157137 #25
Sailfin molly	DUPLICATION
Sailfin molly	MODERN SPECIES	1148																ENSPLAG00000018732 #22	vwc2l (ENSPLAG00000018745) #23
Sailfin molly	MODERN SPECIES	1386								ptprna (ENSPLAG00000013029)	DNAJB2 (ENSPLAG00000013052)	tuba8l5 (ENSPLAG00000013072)	TUBA4A (ENSPLAG00000013090)	POFUT2 (ENSPLAG00000013108)	ENSPLAG00000013121	pofut2 (ENSPLAG00000013151)	ENSPLAG00000013316 #21	ENSPLAG00000013334 #22
Amazon molly	MODERN SPECIES	785																BARD1 (ENSPFOG00000004964) #22	vwc2l (ENSPFOG00000004929) #23	IKZF2 (ENSPFOG00000004878) #25
Guppy	MODERN SPECIES	450	ENSPREG00000010525	ARSD (ENSPREG00000010574)	snx4 (ENSPREG00000010854)	ihha (ENSPREG00000010872)	BIN1 (ENSPREG00000010886)	TMEM198 (ENSPREG00000010929)	desma (ENSPREG00000010938)	ptprna (ENSPREG00000010981)	ENSPREG00000011045	ENSPREG00000011056	tuba8l3 (ENSPREG00000011058)	tuba8l5 (ENSPREG00000011124)	TUBA4A (ENSPREG00000011571)	pofut2 (ENSPREG00000011831)	ABCA12 (ENSPREG00000011867) #21	BARD1 (ENSPREG00000011957) #22	vwc2l (ENSPREG00000011982) #23	IKZF2 (ENSPREG00000012031) #25	ERBB4 (ENSPREG00000012150) #26	CPS1 (ENSPREG00000012234) #28	myl1 (ENSPREG00000012307) #31	ENSPREG00000012328 ##37	ENSPREG00000012384 #34	heg1 (ENSPREG00000012397)	slc12a8 (ENSPREG00000012418)	znf148 (ENSPREG00000012456)	ENSPREG00000012474	asmt (ENSPREG00000012525)	akap17a (ENSPREG00000012540)	SOWAHC (ENSPREG00000012566)	septin10 (ENSPREG00000012591)
Platyfish	DUPLICATION
Platyfish	MODERN SPECIES	3	ENSXMAG00000021270	ENSXMAG00000026131	rhobtb4 (ENSXMAG00000019412)	wdr54 (ENSXMAG00000019411)	nol6 (ENSXMAG00000019408)	ENSXMAG00000019410	ENSXMAG00000021334	aqp3a (ENSXMAG00000019407)	ENSXMAG00000023380	ENSXMAG00000005344	ENSXMAG00000005346	nr2f1a (ENSXMAG00000019406)	fam172a (ENSXMAG00000019404)	KIAA0825 (ENSXMAG00000019403)	ENSXMAG00000030036	ENSXMAG00000019402 #22	MCTP1 (ENSXMAG00000019401)	zgc:194908 (ENSXMAG00000019445)	gig2p (ENSXMAG00000019444)	SKIC3 (ENSXMAG00000019400)	arsk (ENSXMAG00000019399)	arrdc3a (ENSXMAG00000027430)	adgrv1 (ENSXMAG00000000223)	lysmd3 (ENSXMAG00000023141)	ENSXMAG00000023321	mblac2 (ENSXMAG00000028050)	rtkna (ENSXMAG00000001544)	ENSXMAG00000023990	smn1 (ENSXMAG00000001521)	hspb11 (ENSXMAG00000029777)	LZTS1 (ENSXMAG00000001513)
Platyfish	MODERN SPECIES	21	ENSXMAG00000015816	ENSXMAG00000015840	ARSD (ENSXMAG00000015844)	snx4 (ENSXMAG00000015869)	ihha (ENSXMAG00000015886)	BIN1 (ENSXMAG00000015888)	TMEM198 (ENSXMAG00000023639)	desma (ENSXMAG00000025480)	ptprna (ENSXMAG00000015939)	ENSXMAG00000015942	ENSXMAG00000015953	tuba8l5 (ENSXMAG00000015954)	TUBA4A (ENSXMAG00000015955)	pofut2 (ENSXMAG00000015956)	ABCA12 (ENSXMAG00000015970) #21	BARD1 (ENSXMAG00000023971) #22	vwc2l (ENSXMAG00000023254) #23	IKZF2 (ENSXMAG00000026156) #25	ERBB4 (ENSXMAG00000016012) #26	CPS1 (ENSXMAG00000016110) #28	myl1 (ENSXMAG00000024579) #31	ENSXMAG00000029298 ##37	ENSXMAG00000016181 ##37	ENSXMAG00000016184 #34	heg1 (ENSXMAG00000016187)	slc12a8 (ENSXMAG00000016190)	znf148 (ENSXMAG00000016196)	ENSXMAG00000025732	asmt (ENSXMAG00000016211)	akap17a (ENSXMAG00000016225)	SOWAHC (ENSXMAG00000016235)
NAME_4	ANCESTRAL SPECIES	32	ENSGT00940000161140	ENSGT00930000151029.i.a	ENSGT00940000164444.a.d	ENSGT00950000182882.A.b.b.e	ENSGT00390000016940.c.b.a	ENSGT00940000155522.g.a	ENSGT00940000154095.b.b.a.b	ENSGT00940000166954	ENSGT00940000167284	ENSGT00950000183165.b.a.e.b.d.a.a.a.a	ENSGT00950000183165.b.b.b.b.b	ENSGT00950000183165.b.a.e.b.d.a.a.a.b	ENSGT00950000183165.a.b	ENSGT00390000007989	ENSGT00940000157295 #21	ENSGT00940000156532 #22	ENSGT00720000108792.B #23	ENSGT00940000157137 #25	ENSGT00940000154695.d.a #26	ENSGT00940000157192 #28	ENSGT01030000234570.d.a.o #31	ENSGT00940000156597.a.a ##37	ENSGT00530000063688.a #34	ENSGT00530000065251	ENSGT00710000106813.A	ENSGT00940000160130	ENSGT00940000157406	ENSGT00940000158191.b
Sheepshead minnow	MODERN SPECIES	316									PTPRN (ENSCVAG00000015838)	dnajb2 (ENSCVAG00000015878)	ENSCVAG00000015884	ENSCVAG00000015891	TUBA4A (ENSCVAG00000000406)	pofut2 (ENSCVAG00000015944)	ABCA12 (ENSCVAG00000016136) #21	BARD1 (ENSCVAG00000016147) #22	vwc2l (ENSCVAG00000016170) #23	IKZF2 (ENSCVAG00000016213) #25	ERBB4 (ENSCVAG00000016311) #26	CPS1 (ENSCVAG00000016424) #28	myl1 (ENSCVAG00000016478) #31	ENSCVAG00000016556 ##37	ENSCVAG00000016568 #34	ENSCVAG00000016579
Mummichog	MODERN SPECIES	1384																ENSFHEG00000022096 #22
Oryzias	ANCESTRAL SPECIES	10	ENSGT00940000156607.a.b	ENSGT00940000159942.a.c.b	ENSGT00940000161140	ENSGT00930000151029.i.a	ENSGT00940000164444.a	ENSGT00950000182882.A.b.b.e	ENSGT00390000016940.c.b.a	ENSGT00940000155522.g.a	ENSGT00940000154095.b.b.a.b	ENSGT00940000166954	ENSGT00950000183165.b.a.e.b.d.a.a.a.a	ENSGT00950000183165.b.a.e.b.d.a.a.a.b.e.b	ENSGT00950000183165.a.a.b	ENSGT00390000007989	ENSGT00940000157295 #21	ENSGT00940000156532 #22	ENSGT00720000108792.B #23	ENSGT00940000157137 #25	ENSGT00940000154695.d.a #26	ENSGT00940000157192 #28	ENSGT01030000234570.d.a.o #31	ENSGT00940000156597.a.a ##37	ENSGT00770000121792	ENSGT00530000063688.a #34	ENSGT00710000106813.A	ENSGT00940000160130	ENSGT00940000157406	ENSGT00940000158191.b	ENSGT00940000161561	ENSGT00440000039314.a	ENSGT00950000183003.a.a.b.c.b
Oryzias_a	ANCESTRAL SPECIES	45														ENSGT00390000007989	ENSGT00940000157295 #21	ENSGT00940000156532 #22	ENSGT00720000108792.B #23	ENSGT00940000157137 #25	ENSGT00940000154695.d.a #26	ENSGT00940000157192 #28	ENSGT01030000234570.d.a.o #31	ENSGT00940000156597.a.a ##37	ENSGT00530000063688.a #34	ENSGT00710000106813.A	ENSGT00940000160130	ENSGT00940000157406	ENSGT00940000158191.b	ENSGT00940000161561	ENSGT00440000039314.a	ENSGT00950000183003.a.a.b.c.b	ENSGT00940000155238
Chinese medaka	MODERN SPECIES	1111			ENSOSIG00000009259	ercc1 (ENSOSIG00000009256)	ENSOSIG00000009252	ENSOSIG00000009251	ARSD (ENSOSIG00000009248)	snx4 (ENSOSIG00000009111)	ihha (ENSOSIG00000009106)	BIN1 (ENSOSIG00000009098)	TMEM198 (ENSOSIG00000009090)	desma (ENSOSIG00000009059)	ENSOSIG00000009052	pofut2 (ENSOSIG00000009030)	ABCA12 (ENSOSIG00000009001) #21	BARD1 (ENSOSIG00000008999) #22	vwc2l (ENSOSIG00000008998) #23	IKZF2 (ENSOSIG00000008997) #25	ERBB4 (ENSOSIG00000008851) #26	CPS1 (ENSOSIG00000008819) #28	myl1 (ENSOSIG00000008805) #31	ENSOSIG00000008803	ENSOSIG00000008801	ENSOSIG00000008799	slc12a8 (ENSOSIG00000008788)	ENSOSIG00000008783 #34	septin10 (ENSOSIG00000022735)	SOWAHC (ENSOSIG00000022705)	asmt (ENSOSIG00000022703)	akap17a (ENSOSIG00000022697)	SOWAHC (ENSOSIG00000022694)
Japanese Medaka HdrR	MODERN SPECIES	13	ENSORLG00000016217	ENSORLG00000028523	ENSORLG00000016206	ARSD (ENSORLG00000016189)	snx4 (ENSORLG00000016177)	ihha (ENSORLG00000016167)	ENSORLG00000016157	ENSORLG00000016139	desma (ENSORLG00000016133)	ptprna (ENSORLG00000016128)	dnajb2 (ENSORLG00000016120)	ENSORLG00000028339	tuba8l5 (ENSORLG00000029189)	ENSORLG00000026033	ABCA12 (ENSORLG00000016083) #21	BARD1 (ENSORLG00000016051) #22	vwc2l (ENSORLG00000016037) #23	IKZF2 (ENSORLG00000021961) #25	ERBB4 (ENSORLG00000016023) #26	CPS1 (ENSORLG00000016011) #28	myl1 (ENSORLG00000015981) #31	ENSORLG00000015970 ##37	ENSORLG00000027165 ##37	ENSORLG00000025656 #34	heg1 (ENSORLG00000023565)	slc12a8 (ENSORLG00000026774)	znf148 (ENSORLG00000015950)	ENSORLG00000026135	asmt (ENSORLG00000015943)	akap17a (ENSORLG00000015933)	SOWAHC (ENSORLG00000023792)
Oryzias_b	ANCESTRAL SPECIES	10	ENSGT00940000156607.a.b	ENSGT00940000159942.a.c.b	ENSGT00940000161140	ENSGT00930000151029.i.a	ENSGT00940000164444.a	ENSGT00950000182882.A.b.b.e	ENSGT00390000016940.c.b.a	ENSGT00940000155522.g.a	ENSGT00940000154095.b.b.a.b	ENSGT00940000166954	ENSGT00950000183165.b.a.e.b.d.a.a.a.a	ENSGT00950000183165.b.a.e.b.d.a.a.a.b.e.b	ENSGT00950000183165.a.a.b	ENSGT00390000007989	ENSGT00940000157295 #21	ENSGT00940000156532 #22	ENSGT00720000108792.B #23	ENSGT00940000157137 #25	ENSGT00940000154695.d.a #26	ENSGT00940000157192 #28	ENSGT01030000234570.d.a.o #31	ENSGT00940000156597.a.a ##37	ENSGT00770000121792	ENSGT00530000063688.a #34	ENSGT00710000106813.A	ENSGT00940000160130	ENSGT00940000157406	ENSGT00940000158191.b	ENSGT00940000161561	ENSGT00440000039314.a	ENSGT00950000183003.a.a.b.c.b
Indian medaka	MODERN SPECIES	18	ENSOMEG00000001560	ENSOMEG00000001545	ARSD (ENSOMEG00000001528)	snx4 (ENSOMEG00000001521)	ihha (ENSOMEG00000001513)	BIN1 (ENSOMEG00000001504)	TMEM198 (ENSOMEG00000001491)	desma (ENSOMEG00000001483)	ptprna (ENSOMEG00000001475)	ENSOMEG00000001465	ENSOMEG00000001459	TUBA4A (ENSOMEG00000001456)	tuba8l5 (ENSOMEG00000001454)	pofut2 (ENSOMEG00000001447)	ENSOMEG00000001437 #21	BARD1 (ENSOMEG00000001402) #22	vwc2l (ENSOMEG00000001396) #23	IKZF2 (ENSOMEG00000001392) #25	ERBB4 (ENSOMEG00000001386) #26	CPS1 (ENSOMEG00000000010) #28	myl1 (ENSOMEG00000001370) #31	ENSOMEG00000023645 ##37	ENSOMEG00000023611	ENSOMEG00000023601 #34	heg1 (ENSOMEG00000023574)	slc12a8 (ENSOMEG00000023566)	znf148 (ENSOMEG00000023546)	ENSOMEG00000023530	asmt (ENSOMEG00000023515)	akap17a (ENSOMEG00000023506)	SOWAHC (ENSOMEG00000023498)
Javanese ricefish	DUPLICATION
Javanese ricefish	MODERN SPECIES	23	ENSOJAG00000017225	ralgds (ENSOJAG00000017274)	ptgesl (ENSOJAG00000017416)	gle1 (ENSOJAG00000017430)	SMARCB1 (ENSOJAG00000017471)	ENSOJAG00000017564	gstt1a (ENSOJAG00000017574)	tor2a (ENSOJAG00000017582)	SH2D3C (ENSOJAG00000017583)	ENSOJAG00000017589	ENSOJAG00000017601	ENSOJAG00000017622	cnot6l (ENSOJAG00000017630)	mrpl1 (ENSOJAG00000017674)	anxa3a (ENSOJAG00000019068)	ENSOJAG00000019112 #22	bmp2k (ENSOJAG00000019124)	paqr3a (ENSOJAG00000019225)	ENSOJAG00000019252	ENSOJAG00000019269	ENSOJAG00000019288	WHRN (ENSOJAG00000019289)	stxbp1b (ENSOJAG00000019404)	ENSOJAG00000020671	FUT7 (ENSOJAG00000020696)	niban2b (ENSOJAG00000020765)	FHIP2B (ENSOJAG00000021006)	DNM1 (ENSOJAG00000021036)	med27 (ENSOJAG00000021253)	ENSOJAG00000021272	ENSOJAG00000021312
Javanese ricefish	MODERN SPECIES	13	nme9 (ENSOJAG00000022929)	SMARCAL1 (ENSOJAG00000022962)	MARCHF4 (ENSOJAG00000023073)	xrcc5 (ENSOJAG00000023123)	TMEM169 (ENSOJAG00000023227)	PFKL (ENSOJAG00000023258)	MAP3K13 (ENSOJAG00000023295)	hycc2 (ENSOJAG00000023326)	ENSOJAG00000023347	DIP2A (ENSOJAG00000023414)	SLC2A13 (ENSOJAG00000023581)	slco1d1 (ENSOJAG00000023608)	MPPED1 (ENSOJAG00000023646)	pofut2 (ENSOJAG00000023650)	ABCA12 (ENSOJAG00000023678) #21	BARD1 (ENSOJAG00000023702) #22	vwc2l (ENSOJAG00000023705) #23	IKZF2 (ENSOJAG00000023709) #25	ERBB4 (ENSOJAG00000023771) #26	CPS1 (ENSOJAG00000023907) #28	myl1 (ENSOJAG00000023978) #31	ENSOJAG00000023979 ##37	ENSOJAG00000023983 #34	slc12a8 (ENSOJAG00000023989)	znf148 (ENSOJAG00000024003)	ENSOJAG00000003528	asmt (ENSOJAG00000003548)	akap17a (ENSOJAG00000003616)	SOWAHC (ENSOJAG00000003732)	septin10 (ENSOJAG00000003925)	SH3RF3 (ENSOJAG00000004797)
Ovalentaria_B	ANCESTRAL SPECIES	12	ENSGT00940000177459	ENSGT00930000151029.i.a	ENSGT00940000164444.a	ENSGT00950000182882.A.b.b.e	ENSGT00390000016940.c.b.a	ENSGT00940000155522.g.a	ENSGT00940000154095.b.b.a.b	ENSGT00940000166954	ENSGT00950000183165.b.a.e.b.d.a.b	ENSGT00950000183165.b.a.e.b.d.a.a.a.b	ENSGT00940000160220	ENSGT00950000183165.b.a.e.b.d.a.a.a.a	ENSGT00950000183165.a.a.b	ENSGT00390000007989	ENSGT00940000157295 #21	ENSGT00940000156532 #22	ENSGT00720000108792.B #23	ENSGT00940000157137 #25	ENSGT00940000154695.d.a #26	ENSGT00940000157192 #28	ENSGT01030000234570.d.a.o #31	ENSGT00940000156597.a.a ##37	ENSGT00530000063688.a #34	ENSGT00530000065251	ENSGT00710000106813.A	ENSGT00940000160130	ENSGT00940000157406	ENSGT00940000158191.b	ENSGT00940000161561	ENSGT00440000039314.a	ENSGT00950000183003.a.a.b.c.b
Cichlidae	ANCESTRAL SPECIES	14	ENSGT00940000156607.a.b	ENSGT00940000159942.a.c.b	ENSGT00940000161140	ENSGT00930000151029.i.a	ENSGT00940000164444.a	ENSGT00950000182882.A.b.b.e	ENSGT00390000016940.c.b.a	ENSGT00940000155522.g.a	ENSGT00940000154095.b.b.a.b	ENSGT00940000166954	ENSGT00950000183165.b.a.e.b.d.a.b	ENSGT00950000183165.b.a.e.b.d.a.a.a.b	ENSGT00950000183165.a.a.b	ENSGT00390000007989	ENSGT00940000157295 #21	ENSGT00940000156532 #22	ENSGT00720000108792.B #23	ENSGT00940000157137 #25	ENSGT00940000154695.d.a #26	ENSGT00940000157192 #28	ENSGT01030000234570.d.a.o #31	ENSGT00940000156597.a.a ##37	ENSGT00530000063688.a #34	ENSGT00710000106813.A	ENSGT00940000160130	ENSGT00940000157406	ENSGT00940000158191.b	ENSGT00940000161561	ENSGT00440000039314.a	ENSGT00950000183003.a.a.b.c.b	ENSGT00940000155238
Pseudocrenilabrinae	ANCESTRAL SPECIES	15	ENSGT00940000156607.a.b	ENSGT00940000159942.a.c.b	ENSGT00940000161140	ENSGT00930000151029.i.a	ENSGT00940000164444.a	ENSGT00950000182882.A.b.b.e	ENSGT00390000016940.c.b.a	ENSGT00940000155522.g.a	ENSGT00940000154095.b.b.a.b	ENSGT00940000166954	ENSGT00950000183165.b.a.e.b.d.a.b	ENSGT00950000183165.b.a.e.b.d.a.a.a.b	ENSGT00950000183165.a.a.b	ENSGT00390000007989	ENSGT00940000157295 #21	ENSGT00940000156532 #22	ENSGT00720000108792.B #23	ENSGT00940000157137 #25	ENSGT00940000154695.d.a #26	ENSGT00940000157192 #28	ENSGT01030000234570.d.a.o #31	ENSGT00940000156597.a.a ##37	ENSGT00530000063688.a #34	ENSGT00710000106813.A	ENSGT00940000160130	ENSGT00940000157406	ENSGT00940000158191.b	ENSGT00940000161561	ENSGT00440000039314.a	ENSGT00950000183003.a.a.b.c.b	ENSGT00940000155238
Pseudocrenilabrinae_A	ANCESTRAL SPECIES	14	ENSGT00940000159942.a.c.b	ENSGT00940000161140	ENSGT00930000151029.i.a	ENSGT00940000164444.a	ENSGT00950000182882.A.b.b.e	ENSGT00390000016940.c.b.a	ENSGT00940000155522.g.a	ENSGT00940000154095.b.b.a.b	ENSGT00940000166954	ENSGT00950000183165.b.a.e.b.d.a.b	ENSGT00950000183165.a.a.b.m	ENSGT00950000183165.b.a.e.b.d.a.a.a.b	ENSGT00950000183165.a.a.b.n	ENSGT00390000007989	ENSGT00940000157295 #21	ENSGT00940000156532 #22	ENSGT00720000108792.B #23	ENSGT00940000157137 #25	ENSGT00940000154695.d.a #26	ENSGT00940000157192 #28	ENSGT01030000234570.d.a.o #31	ENSGT00940000156597.a.a ##37	ENSGT00530000063688.a #34	ENSGT00710000106813.A	ENSGT00940000160130	ENSGT00940000157406	ENSGT00940000158191.b	ENSGT00940000161561	ENSGT00440000039314.a	ENSGT00950000183003.a.a.b.c.b	ENSGT00940000155238
Haplochromini	ANCESTRAL SPECIES	19	ENSGT00940000159942.a.c.b	ENSGT00940000161140	ENSGT00930000151029.i.a	ENSGT00940000164444.a	ENSGT00950000182882.A.b.b.e	ENSGT00390000016940.c.b.a	ENSGT00940000155522.g.a	ENSGT00940000154095.b.b.a.b	ENSGT00940000166954	ENSGT00950000183165.b.a.e.b.d.a.b	ENSGT00950000183165.a.a.b.m	ENSGT00950000183165.b.a.e.b.d.a.a.a.b	ENSGT00950000183165.a.a.b.n	ENSGT00390000007989	ENSGT00940000157295 #21	ENSGT00940000156532 #22	ENSGT00720000108792.B #23	ENSGT00940000157137 #25	ENSGT00940000154695.d.a #26	ENSGT00940000157192 #28	ENSGT01030000234570.d.a.o #31	ENSGT00940000156597.a.a ##37	ENSGT00530000063688.a #34	ENSGT00710000106813.A	ENSGT00940000160130	ENSGT00940000157406	ENSGT00940000158191.b	ENSGT00940000161561	ENSGT00440000039314.a	ENSGT00950000183003.a.a.b.c.b	ENSGT00940000155238
Burton s mouthbrooder	MODERN SPECIES	292	ENSHBUG00000002501	ENSHBUG00000002478	ARSD (ENSHBUG00000002466)	snx4 (ENSHBUG00000002456)	ihha (ENSHBUG00000002444)	BIN1 (ENSHBUG00000002426)	ENSHBUG00000002390	desma (ENSHBUG00000002384)	ptprna (ENSHBUG00000002362)	ENSHBUG00000002347	tuba8l3 (ENSHBUG00000002335)	tuba8l5 (ENSHBUG00000002313)	tuba8l2 (ENSHBUG00000002247)	pofut2 (ENSHBUG00000002238)	ABCA12 (ENSHBUG00000000032) #21	BARD1 (ENSHBUG00000002170) #22	vwc2l (ENSHBUG00000002163) #23	IKZF2 (ENSHBUG00000002155) #25	ENSHBUG00000002141 #26
Haplochromini_A	ANCESTRAL SPECIES	19	ENSGT00940000159942.a.c.b	ENSGT00940000161140	ENSGT00930000151029.i.a	ENSGT00940000164444.a	ENSGT00950000182882.A.b.b.e	ENSGT00390000016940.c.b.a	ENSGT00940000155522.g.a	ENSGT00940000154095.b.b.a.b	ENSGT00940000166954	ENSGT00950000183165.b.a.e.b.d.a.b	ENSGT00950000183165.a.a.b.m	ENSGT00950000183165.a.b	ENSGT00950000183165.a.a.b.n	ENSGT00390000007989	ENSGT00940000157295 #21	ENSGT00940000156532 #22	ENSGT00720000108792.B #23	ENSGT00940000157137 #25	ENSGT00940000154695.d.a #26	ENSGT00940000157192 #28	ENSGT01030000234570.d.a.o #31	ENSGT00940000156597.a.a ##37	ENSGT00940000156597.a.b.b.b ##37	ENSGT00710000106813.A	ENSGT00940000160130	ENSGT00940000157406	ENSGT00940000158191.b	ENSGT00940000161561	ENSGT00440000039314.a	ENSGT00950000183003.a.a.b.c.b	ENSGT00940000155238
P. nyererei	MODERN SPECIES	304	ENSPNYG00000019580	ENSPNYG00000019569	ARSD (ENSPNYG00000019558)	snx4 (ENSPNYG00000019545)	ihha (ENSPNYG00000019521)	BIN1 (ENSPNYG00000019482)	ENSPNYG00000019464	desma (ENSPNYG00000019452)	ptprna (ENSPNYG00000019403)	dnajb2 (ENSPNYG00000019380)	tuba8l3 (ENSPNYG00000019360)	ENSPNYG00000019350	ENSPNYG00000019336	pofut2 (ENSPNYG00000019307)	ABCA12 (ENSPNYG00000019221) #21	BARD1 (ENSPNYG00000019180) #22	vwc2l (ENSPNYG00000019164) #23	IKZF2 (ENSPNYG00000019142) #25	ERBB4 (ENSPNYG00000019033) #26	CPS1 (ENSPNYG00000018939) #28	myl1 (ENSPNYG00000018903) #31	ENSPNYG00000018825 ##37	heg1 (ENSPNYG00000018801)	slc12a8 (ENSPNYG00000018770)	znf148 (ENSPNYG00000018749)	ENSPNYG00000018740	asmt (ENSPNYG00000018712)	akap17a (ENSPNYG00000018690)	SOWAHC (ENSPNYG00000018667)	septin10 (ENSPNYG00000018627)	SH3RF3 (ENSPNYG00000018604)
Haplochromini_B	ANCESTRAL SPECIES	17	ENSGT00940000156607.a.b	ENSGT00940000159942.a.c.b	ENSGT00940000161140	ENSGT00930000151029.i.a	ENSGT00940000164444.a	ENSGT00950000182882.A.b.b.e	ENSGT00390000016940.c.b.a	ENSGT00940000155522.g.a	ENSGT00940000154095.b.b.a.b	ENSGT00940000166954	ENSGT00950000183165.b.a.e.b.d.a.b	ENSGT00950000183165.a.a.b.m	ENSGT00950000183165.a.a.b.n	ENSGT00390000007989	ENSGT00940000157295 #21	ENSGT00940000156532 #22	ENSGT00720000108792.B #23	ENSGT00940000157137 #25	ENSGT00940000154695.d.a #26	ENSGT00940000157192 #28	ENSGT01030000234570.d.a.o #31	ENSGT00940000156597.a.a ##37	ENSGT00940000156597.a.b.b.b ##37	ENSGT00710000106813.A	ENSGT00940000160130	ENSGT00940000157406	ENSGT00940000158191.b	ENSGT00940000161561	ENSGT00440000039314.a	ENSGT00950000183003.a.a.b.c.b	ENSGT00940000155238
Eastern happy	MODERN SPECIES	7	ENSACLG00000017506	ENSACLG00000017564	ARSD (ENSACLG00000017616)	snx4 (ENSACLG00000017625)	ihha (ENSACLG00000017644)	BIN1 (ENSACLG00000017695)	ENSACLG00000017806	desma (ENSACLG00000017825)	ptprna (ENSACLG00000017857)	ENSACLG00000018045	tuba8l3 (ENSACLG00000018109)	tuba8l2 (ENSACLG00000018133)	ENSACLG00000018150	pofut2 (ENSACLG00000018165)	ABCA12 (ENSACLG00000018285) #21	BARD1 (ENSACLG00000018628) #22	vwc2l (ENSACLG00000018706) #23	ENSACLG00000018736	ENSACLG00000018749	IKZF2 (ENSACLG00000018764) #25	ERBB4 (ENSACLG00000018831) #26	ENSACLG00000018948	CPS1 (ENSACLG00000018983) #28	ENSACLG00000019222	myl1 (ENSACLG00000019231) #31	ENSACLG00000019307 ##37	ENSACLG00000019355 ##37	heg1 (ENSACLG00000019369)	slc12a8 (ENSACLG00000019483)	znf148 (ENSACLG00000019554)	ENSACLG00000019575
Zebra mbuna	MODERN SPECIES	1098	ENSMZEG00005009686	ENSMZEG00005009706	ENSMZEG00005009714	ARSD (ENSMZEG00005009721)	snx4 (ENSMZEG00005009736)	ihha (ENSMZEG00005009753)	BIN1 (ENSMZEG00005009771)	ENSMZEG00005009806	desma (ENSMZEG00005009818)	ptprna (ENSMZEG00005009875)	dnajb2 (ENSMZEG00005009938)	tuba8l3 (ENSMZEG00005009951)	tuba8l2 (ENSMZEG00005009961)	TUBA4A (ENSMZEG00005009972)	ABCA12 (ENSMZEG00005009994) #21	BARD1 (ENSMZEG00005010042) #22	vwc2l (ENSMZEG00005010054) #23	IKZF2 (ENSMZEG00005010065) #25	ERBB4 (ENSMZEG00005010084) #26	CPS1 (ENSMZEG00005010171) #28	myl1 (ENSMZEG00005010302) #31	ENSMZEG00005010331 ##37	heg1 (ENSMZEG00005010368)	slc12a8 (ENSMZEG00005010386)	znf148 (ENSMZEG00005010409)	ENSMZEG00005010416	asmt (ENSMZEG00005010427)	akap17a (ENSMZEG00005010443)	SOWAHC (ENSMZEG00005010457)	septin10 (ENSMZEG00005010486)	SH3RF3 (ENSMZEG00005010524)
Lyretail cichlid	MODERN SPECIES	380							desma (ENSNBRG00000001874)	dnajb2 (ENSNBRG00000001910)	ENSNBRG00000001935	ENSNBRG00000001948	TUBA4A (ENSNBRG00000001954)	ENSNBRG00000001986	ENSNBRG00000002000	pofut2 (ENSNBRG00000002022)	ABCA12 (ENSNBRG00000002053) #21	ENSNBRG00000002271 #22	vwc2l (ENSNBRG00000002289) #23	IKZF2 (ENSNBRG00000002322) #25	ERBB4 (ENSNBRG00000002383) #26	CPS1 (ENSNBRG00000002488) #28	myl1 (ENSNBRG00000002626) #31	ENSNBRG00000002650 ##37	ENSNBRG00000002730	slc12a8 (ENSNBRG00000002742)	znf148 (ENSNBRG00000002784)	ENSNBRG00000002806	asmt (ENSNBRG00000002826)	akap17a (ENSNBRG00000002852)	SOWAHC (ENSNBRG00000002882)	septin10 (ENSNBRG00000002904)	SH3RF3 (ENSNBRG00000002947)
Nile tilapia	MODERN SPECIES	7	ercc1 (ENSONIG00000004132)	ENSONIG00000004137	ENSONIG00000004142	ENSONIG00000004145	snx4 (ENSONIG00000004151)	ihha (ENSONIG00000004153)	BIN1 (ENSONIG00000004154)	TMEM198 (ENSONIG00000004159)	desma (ENSONIG00000037686)	ptprna (ENSONIG00000004172)	ENSONIG00000004181	ENSONIG00000031701	TUBA4A (ENSONIG00000036516)	pofut2 (ENSONIG00000004193)	ABCA12 (ENSONIG00000004195) #21	BARD1 (ENSONIG00000004203) #22	vwc2l (ENSONIG00000004208) #23	IKZF2 (ENSONIG00000004211) #25	ERBB4 (ENSONIG00000004212) #26	CPS1 (ENSONIG00000004217) #28	myl1 (ENSONIG00000004223) #31	ENSONIG00000004229 ##37	ENSONIG00000034825 #34	heg1 (ENSONIG00000004232)	znf148 (ENSONIG00000004240)	ENSONIG00000004241	asmt (ENSONIG00000004243)	akap17a (ENSONIG00000004245)	SOWAHC (ENSONIG00000004249)	septin10 (ENSONIG00000004250)	SH3RF3 (ENSONIG00000004255)
Midas cichlid	MODERN SPECIES	187					ihha (ENSACIG00000012462)	BIN1 (ENSACIG00000012480)	ENSACIG00000012526	desma (ENSACIG00000012550)	ptprna (ENSACIG00000012578)	ENSACIG00000012629	ENSACIG00000012650	ENSACIG00000012657	tuba8l2 (ENSACIG00000012688)	pofut2 (ENSACIG00000012992)	ABCA12 (ENSACIG00000013024) #21	ENSACIG00000013172 #22	vwc2l (ENSACIG00000013184) #23	IKZF2 (ENSACIG00000013205) #25	ERBB4 (ENSACIG00000013232) #26
Pomacentridae	ANCESTRAL SPECIES	17	ENSGT00940000156607.a.b	ENSGT00940000159942.a.c.b.j.b	ENSGT00940000161140	ENSGT00940000177459	ENSGT00930000151029.i.a	ENSGT00940000164444.a	ENSGT00950000182882.A.b.b.e	ENSGT00390000016940.c.b.a	ENSGT00940000155522.g.a	ENSGT00940000154095.b.b.a.b	ENSGT00940000160220	ENSGT00950000183165.b.a.e.b.d.a.a.a.a	ENSGT00950000183165.a.a.b	ENSGT00390000007989	ENSGT00940000157295 #21	ENSGT00940000156532 #22	ENSGT00720000108792.B #23	ENSGT00940000157137 #25	ENSGT00940000154695.d.a #26	ENSGT00940000157192 #28	ENSGT01030000234570.d.a.o #31	ENSGT00940000156597.a.a ##37	ENSGT00770000121792	ENSGT00530000065251	ENSGT00710000106813.A	ENSGT00940000160130	ENSGT00940000157406	ENSGT00940000158191.b	ENSGT00940000161561	ENSGT00440000039314.a	ENSGT00950000183003.a.a.b.c.b
Pomacentridae_A	ANCESTRAL SPECIES	14	ENSGT00940000156607.a.b	ENSGT00940000159942.a.c.b.j.b	ENSGT00940000161140	ENSGT00940000177459	ENSGT00930000151029.i.a	ENSGT00940000164444.a	ENSGT00950000182882.A.b.b.e	ENSGT00390000016940.c.b.a	ENSGT00940000155522.g.a	ENSGT00940000154095.b.b.a.b	ENSGT00940000160220	ENSGT00950000183165.b.a.e.b.d.a.a.a.a	ENSGT00950000183165.a.a.b	ENSGT00390000007989	ENSGT00940000157295 #21	ENSGT00940000156532 #22	ENSGT00720000108792.B #23	ENSGT00940000157137 #25	ENSGT00940000154695.d.a #26	ENSGT00940000157192 #28	ENSGT01030000234570.d.a.o #31	ENSGT00940000156597.a.a ##37	ENSGT00770000121792	ENSGT00530000065251	ENSGT00710000106813.A	ENSGT00940000160130	ENSGT00940000157406	ENSGT00940000158191.b	ENSGT00940000161561	ENSGT00440000039314.a	ENSGT00950000183003.a.a.b.c.b
Amphiprion	ANCESTRAL SPECIES	8	ENSGT00940000156607.a.b	ENSGT00940000159942.a.c.b.j.b	ENSGT00940000161140	ENSGT00940000177459	ENSGT00930000151029.i.a	ENSGT00940000164444.a	ENSGT00950000182882.A.b.b.e	ENSGT00390000016940.c.b.a	ENSGT00940000155522.g.a	ENSGT00940000154095.b.b.a.b	ENSGT00940000160220	ENSGT00950000183165.b.a.e.b.d.a.a.a.a	ENSGT00950000183165.a.a.b	ENSGT00390000007989	ENSGT00940000157295 #21	ENSGT00940000156532 #22	ENSGT00720000108792.B #23	ENSGT00940000157137 #25	ENSGT00940000154695.d.a #26	ENSGT00940000157192 #28	ENSGT01030000234570.d.a.o #31	ENSGT00940000156597.a.a ##37	ENSGT00770000121792	ENSGT00530000065251	ENSGT00710000106813.A	ENSGT00940000160130	ENSGT00940000157406	ENSGT00940000158191.b	ENSGT00940000161561	ENSGT00440000039314.a	ENSGT00950000183003.a.a.b.c.b
Clown anemonefish	MODERN SPECIES	1332			ENSAOCG00000013161	txlng (ENSAOCG00000013121)	ccdc102a (ENSAOCG00000013089)	DOK4 (ENSAOCG00000013035)	ENSAOCG00000012999	ENSAOCG00000000816	ENSAOCG00000012968	dnajb2 (ENSAOCG00000012947)	ENSAOCG00000012920	ENSAOCG00000012907	tuba8l2 (ENSAOCG00000012883)	pofut2 (ENSAOCG00000012869)	ABCA12 (ENSAOCG00000012768) #21	ENSAOCG00000012449 #22	vwc2l (ENSAOCG00000012427) #23
Orange clownfish	MODERN SPECIES	3	ENSAPEG00000015006	ENSAPEG00000014989	ENSAPEG00000014973	snx4 (ENSAPEG00000014894)	ihha (ENSAPEG00000014855)	BIN1 (ENSAPEG00000014789)	ENSAPEG00000014771	desma (ENSAPEG00000014669)	ptprna (ENSAPEG00000014592)	DNAJB2 (ENSAPEG00000014542)	ENSAPEG00000014518	tuba8l2 (ENSAPEG00000014468)	ENSAPEG00000014433 #21	ENSAPEG00000014351 #21	ENSAPEG00000014331	BARD1 (ENSAPEG00000014295) #22	vwc2l (ENSAPEG00000014274) #23	IKZF2 (ENSAPEG00000014248) #25	ERBB4 (ENSAPEG00000014144) #26	CPS1 (ENSAPEG00000014016) #28	myl1 (ENSAPEG00000013958) #31	ENSAPEG00000013884 ##37	ENSAPEG00000013872	ENSAPEG00000013812	ENSAPEG00000013798	heg1 (ENSAPEG00000013778)	slc12a8 (ENSAPEG00000013730)	znf148 (ENSAPEG00000013708)	ENSAPEG00000013690	asmt (ENSAPEG00000013602)	akap17a (ENSAPEG00000013582)
Spiny chromis	MODERN SPECIES	81			ARSD (ENSAPOG00000015317)	snx4 (ENSAPOG00000014809)	ihha (ENSAPOG00000014796)	BIN1 (ENSAPOG00000014758)	ENSAPOG00000014705	desma (ENSAPOG00000014692)	ptprna (ENSAPOG00000014654)	dnajb2 (ENSAPOG00000014642)	ENSAPOG00000014600	ENSAPOG00000014594	ENSAPOG00000014575	pofut2 (ENSAPOG00000014547)	ABCA12 (ENSAPOG00000014477) #21	BARD1 (ENSAPOG00000014164) #22	vwc2l (ENSAPOG00000014149) #23	IKZF2 (ENSAPOG00000014129) #25	ENSAPOG00000014093 #26	ERBB4 (ENSAPOG00000014015) #26
Bicolor damselfish	DUPLICATION
Bicolor damselfish	MODERN SPECIES	249			ENSSPAG00000005673	rhobtb4 (ENSSPAG00000005619)	wdr54 (ENSSPAG00000005585)	ENSSPAG00000005577	ENSSPAG00000005573	nol6 (ENSSPAG00000005542)	aqp3a (ENSSPAG00000005530)	ENSSPAG00000005519	ENSSPAG00000005503	ENSSPAG00000005487	nr2f1a (ENSSPAG00000005457)	fam172a (ENSSPAG00000005425)	KIAA0825 (ENSSPAG00000005364)	ENSSPAG00000005351 #22	MCTP1 (ENSSPAG00000005312)	zgc:194908 (ENSSPAG00000005300)	ENSSPAG00000005288	gig2p (ENSSPAG00000005267)	gig2p (ENSSPAG00000005252)	SKIC3 (ENSSPAG00000004734)	arrdc3a (ENSSPAG00000004664)	adgrv1 (ENSSPAG00000004466)	lysmd3 (ENSSPAG00000004446)	ENSSPAG00000004432	mblac2 (ENSSPAG00000004423)	rtkna (ENSSPAG00000004381)	smn1 (ENSSPAG00000004345)	hspb11 (ENSSPAG00000004331)	LZTS1 (ENSSPAG00000004257)
Bicolor damselfish	MODERN SPECIES	1505										ptprna (ENSSPAG00000004793)	ENSSPAG00000004779	ENSSPAG00000004747	tuba8l2 (ENSSPAG00000004732)	pofut2 (ENSSPAG00000004695)	ABCA12 (ENSSPAG00000004572) #21	BARD1 (ENSSPAG00000004534) #22	vwc2l (ENSSPAG00000004521) #23
Percomorphaceae_C	ANCESTRAL SPECIES	13	ENSGT00940000161140	ENSGT00940000177459	ENSGT00930000151029.i.a	ENSGT00940000164444.a	ENSGT00950000182882.A.b.b.e	ENSGT00390000016940.c.b.a	ENSGT00940000155522.g.a	ENSGT00940000154095.b.b.a.b	ENSGT00940000160220	ENSGT00950000183165.b.a.e.b.d.a.a.a.a	ENSGT00950000183165.b.a.e.b.d.a.a.a.b	ENSGT00950000183165.a.a.b	ENSGT00390000007946.i.a	ENSGT00390000007989	ENSGT00940000157295 #21	ENSGT00940000156532 #22	ENSGT00720000108792.B #23	ENSGT00940000157137 #25	ENSGT00940000154695.d.a #26	ENSGT00940000157192 #28	ENSGT01030000234570.d.a.o #31	ENSGT00940000156597.a.a ##37	ENSGT00770000121792	ENSGT00530000063688.a #34	ENSGT00530000065251	ENSGT00710000106813.A	ENSGT00940000160130	ENSGT00940000157406	ENSGT00940000158191.b	ENSGT00940000161561	ENSGT00440000039314.a
Percomorphaceae_D	ANCESTRAL SPECIES	12	ENSGT00940000161140	ENSGT00940000177459	ENSGT00930000151029.i.a	ENSGT00940000164444.a	ENSGT00950000182882.A.b.b.e	ENSGT00390000016940.c.b.a	ENSGT00940000155522.g.a	ENSGT00940000154095.b.b.a.b	ENSGT00940000160220	ENSGT00950000183165.b.a.e.b.d.a.a.a.a	ENSGT00950000183165.b.a.e.b.d.a.a.a.b	ENSGT00950000183165.a.a.b	ENSGT00390000007946.i.a	ENSGT00390000007989	ENSGT00940000157295 #21	ENSGT00940000156532 #22	ENSGT00720000108792.B #23	ENSGT00940000157137 #25	ENSGT00940000154695.d.a #26	ENSGT00940000157192 #28	ENSGT01030000234570.d.a.o #31	ENSGT00940000156597.a.a ##37	ENSGT00530000063688.a #34	ENSGT00530000065251	ENSGT00710000106813.A	ENSGT00940000160130	ENSGT00940000157406	ENSGT00940000158191.b	ENSGT00940000161561	ENSGT00440000039314.a	ENSGT00950000183003.a.a.b.c.b
Anabantaria	ANCESTRAL SPECIES	14	ENSGT00940000159942.a.c.b	ENSGT00940000161140	ENSGT00940000177459	ENSGT00930000151029.i.a	ENSGT00940000164444.a	ENSGT00950000182882.A.b.b.e	ENSGT00390000016940.c.b.a	ENSGT00940000155522.g.a	ENSGT00940000154095.b.b.a.b	ENSGT00940000160220	ENSGT00950000183165.b.a.e.b.d.a.a.a.a	ENSGT00950000183165.b.a.e.b.d.a.a.a.b	ENSGT00950000183165.a.a.b	ENSGT00390000007989	ENSGT00940000157295 #21	ENSGT00940000156532 #22	ENSGT00720000108792.B #23	ENSGT00940000157137 #25	ENSGT00940000154695.d.a #26	ENSGT00940000157192 #28	ENSGT01030000234570.d.a.o #31	ENSGT00940000156597.a.a ##37	ENSGT00530000063688.a #34	ENSGT00530000065251	ENSGT00710000106813.A	ENSGT00940000160130	ENSGT00940000157406	ENSGT00940000158191.b	ENSGT00940000161561	ENSGT00440000039314.a	ENSGT00950000183003.a.a.b.c.b
Anabantoidei	ANCESTRAL SPECIES	13	ENSGT00940000159942.a.c.b	ENSGT00940000161140	ENSGT00940000177459	ENSGT00930000151029.i.a	ENSGT00940000164444.a	ENSGT00950000182882.A.b.b.e	ENSGT00390000016940.c.b.a	ENSGT00940000155522.g.a	ENSGT00940000154095.b.b.a.b	ENSGT00940000160220	ENSGT00950000183165.b.a.e.b.d.a.a.a.a	ENSGT00950000183165.b.a.e.b.d.a.a.a.b	ENSGT00950000183165.a.a.b	ENSGT00390000007989	ENSGT00940000157295 #21	ENSGT00940000156532 #22	ENSGT00720000108792.B #23	ENSGT00940000157137 #25	ENSGT00940000154695.d.a #26	ENSGT00940000157192 #28	ENSGT01030000234570.d.a.o #31	ENSGT00940000156597.a.a ##37	ENSGT00530000063688.a #34	ENSGT00710000106813.A	ENSGT00940000160130	ENSGT00940000157406	ENSGT00940000158191.b	ENSGT00940000161561	ENSGT00440000039314.a	ENSGT00950000183003.a.a.b.c.b	ENSGT00940000155238
Climbing perch	MODERN SPECIES	12	ENSATEG00000021181	ENSATEG00000029089	ENSATEG00000021258	ENSATEG00000021355	ENSATEG00000021382	ihha (ENSATEG00000021413)	ENSATEG00000021427	ENSATEG00000021452	desma (ENSATEG00000021476)	ptprna (ENSATEG00000021498)	DNAJB2 (ENSATEG00000028623)	tuba8l5 (ENSATEG00000021555)	TUBA4A (ENSATEG00000021606)	pofut2 (ENSATEG00000021612)	ABCA12 (ENSATEG00000000040) #21	BARD1 (ENSATEG00000000424) #22	vwc2l (ENSATEG00000000428) #23	IKZF2 (ENSATEG00000000447) #25	ERBB4 (ENSATEG00000000455) #26	CPS1 (ENSATEG00000000462) #28	ENSATEG00000000630	myl1 (ENSATEG00000000643) #31	ENSATEG00000026644 ##37	ENSATEG00000000828 #34	heg1 (ENSATEG00000000847)	slc12a8 (ENSATEG00000000857)	znf148 (ENSATEG00000000928)	ENSATEG00000000955	asmt (ENSATEG00000000960)	akap17a (ENSATEG00000000994)	SOWAHC (ENSATEG00000001002)
Siamese fighting fish	MODERN SPECIES	11	ENSBSLG00000016662	ARSD (ENSBSLG00000016694)	snx4 (ENSBSLG00000016902)	ihha (ENSBSLG00000018156)	BIN1 (ENSBSLG00000018210)	TMEM198 (ENSBSLG00000018737)	desma (ENSBSLG00000018806)	ptprna (ENSBSLG00000019418)	DNAJB2 (ENSBSLG00000019762)	ENSBSLG00000019793	TUBA4A (ENSBSLG00000019829)	pofut2 (ENSBSLG00000019855)	ENSBSLG00000020024	ENSBSLG00000020034	ABCA12 (ENSBSLG00000020049) #21	BARD1 (ENSBSLG00000021003) #22	vwc2l (ENSBSLG00000021033) #23	IKZF2 (ENSBSLG00000021076) #25	ERBB4 (ENSBSLG00000021569) #26	ENSBSLG00000025031	CPS1 (ENSBSLG00000025087) #28	myl1 (ENSBSLG00000025310) #31	ENSBSLG00000025311 ##37	ENSBSLG00000025312 ##37	ENSBSLG00000025314 #34	heg1 (ENSBSLG00000025315)	slc12a8 (ENSBSLG00000025320)	znf148 (ENSBSLG00000025324)	ENSBSLG00000025325	asmt (ENSBSLG00000025326)	akap17a (ENSBSLG00000025327)
Zig-zag eel	MODERN SPECIES	13	ENSMAMG00000019648	ENSMAMG00000019642	ENSMAMG00000019630	ENSMAMG00000019607	ihha (ENSMAMG00000019587)	ENSMAMG00000019487	ENSMAMG00000019470	desma (ENSMAMG00000019458)	ptprna (ENSMAMG00000019448)	DNAJB2 (ENSMAMG00000019409)	ENSMAMG00000027081	tuba8l5 (ENSMAMG00000026124)	TUBA4A (ENSMAMG00000019003)	pofut2 (ENSMAMG00000018998)	ENSMAMG00000018956 #21	BARD1 (ENSMAMG00000018939) #22	vwc2l (ENSMAMG00000018923) #23	ENSMAMG00000025019	IKZF2 (ENSMAMG00000018911) #25	ERBB4 (ENSMAMG00000018854) #26	CPS1 (ENSMAMG00000018705) #28	myl1 (ENSMAMG00000018692) #31	ENSMAMG00000018654 ##37	ENSMAMG00000018645 ##37	ENSMAMG00000024867	ENSMAMG00000018637 #34	ENSMAMG00000026411	heg1 (ENSMAMG00000018608)	slc12a8 (ENSMAMG00000018580)	znf148 (ENSMAMG00000018560)	ENSMAMG00000026727
Carangaria	ANCESTRAL SPECIES	12	ENSGT00940000161140	ENSGT00940000177459	ENSGT00930000151029.i.a	ENSGT00940000164444.a	ENSGT00950000182882.A.b.b.e	ENSGT00390000016940.c.b.a	ENSGT00940000155522.g.a	ENSGT00940000154095.b.b.a.b	ENSGT00940000160220	ENSGT00950000183165.b.a.e.b.d.a.a.a.a	ENSGT00950000183165.b.a.e.b.d.a.a.a.b	ENSGT00950000183165.a.a.b	ENSGT00390000007946.i.a	ENSGT00390000007989	ENSGT00940000157295 #21	ENSGT00940000156532 #22	ENSGT00720000108792.B #23	ENSGT00940000157137 #25	ENSGT00940000154695.d.a #26	ENSGT00940000157192 #28	ENSGT01030000234570.d.a.o #31	ENSGT00940000156597.a.a ##37	ENSGT00530000063688.a #34	ENSGT00530000065251	ENSGT00710000106813.A	ENSGT00940000160130	ENSGT00940000157406	ENSGT00940000158191.b	ENSGT00940000161561	ENSGT00440000039314.a	ENSGT00950000183003.a.a.b.c.b
Carangaria_A	ANCESTRAL SPECIES	11	ENSGT00940000161140	ENSGT00940000177459	ENSGT00930000151029.i.a	ENSGT00940000164444.a	ENSGT00950000182882.A.b.b.e	ENSGT00390000016940.c.b.a	ENSGT00940000155522.g.a	ENSGT00940000154095.b.b.a.b	ENSGT00940000160220	ENSGT00950000183165.b.a.e.b.d.a.a.a.a	ENSGT00950000183165.b.a.e.b.d.a.a.a.b	ENSGT00950000183165.a.a.b	ENSGT00390000007946.i.a	ENSGT00390000007989	ENSGT00940000157295 #21	ENSGT00940000156532 #22	ENSGT00720000108792.B #23	ENSGT00940000157137 #25	ENSGT00940000154695.d.a #26	ENSGT00940000157192 #28	ENSGT01030000234570.d.a.o #31	ENSGT00940000156597.a.a ##37	ENSGT00530000063688.a #34	ENSGT00970000197603	ENSGT00710000106813.A	ENSGT00940000160130	ENSGT00940000157406	ENSGT00940000158191.b	ENSGT00940000161561	ENSGT00440000039314.a	ENSGT00950000183003.a.a.b.c.b
Seriola	ANCESTRAL SPECIES	6	ENSGT00940000161140	ENSGT00940000177459	ENSGT00930000151029.i.a	ENSGT00940000164444.a	ENSGT00950000182882.A.b.b.e	ENSGT00390000016940.c.b.a	ENSGT00940000155522.g.a	ENSGT00940000154095.b.b.a.b	ENSGT00940000160220	ENSGT00950000183165.b.a.e.b.d.a.a.a.a	ENSGT00950000183165.b.a.e.b.d.a.a.a.b	ENSGT00950000183165.a.a.b	ENSGT00390000007946.i.a	ENSGT00390000007989	ENSGT00940000157295 #21	ENSGT00940000156532 #22	ENSGT00720000108792.B #23	ENSGT00940000157137 #25	ENSGT00940000154695.d.a #26	ENSGT00940000157192 #28	ENSGT01030000234570.d.a.o #31	ENSGT00940000156597.a.a ##37	ENSGT00530000063688.a #34	ENSGT00710000106813.A	ENSGT00940000160130	ENSGT00940000157406	ENSGT00940000158191.b	ENSGT00940000161561	ENSGT00440000039314.a	ENSGT00950000183003.a.a.b.c.b	ENSGT00940000155238
Greater amberjack	MODERN SPECIES	21	ENSSDUG00000015372	ENSSDUG00000015101	ENSSDUG00000015061	snx4 (ENSSDUG00000015041)	ihha (ENSSDUG00000015029)	BIN1 (ENSSDUG00000014982)	TMEM198 (ENSSDUG00000014945)	desma (ENSSDUG00000014903)	ptprna (ENSSDUG00000014837)	DNAJB2 (ENSSDUG00000014791)	ENSSDUG00000014783	tuba8l2 (ENSSDUG00000014773)	ENSSDUG00000014686	pofut2 (ENSSDUG00000014667)	ABCA12 (ENSSDUG00000014541) #21	BARD1 (ENSSDUG00000014493) #22	vwc2l (ENSSDUG00000014480) #23	IKZF2 (ENSSDUG00000014466) #25	ERBB4 (ENSSDUG00000014369) #26	CPS1 (ENSSDUG00000014241) #28	myl1 (ENSSDUG00000014209) #31	ENSSDUG00000014138 ##37	ENSSDUG00000014096 #34	ENSSDUG00000014084	slc12a8 (ENSSDUG00000014021)	znf148 (ENSSDUG00000013986)	ENSSDUG00000013971	asmt (ENSSDUG00000013918)	akap17a (ENSSDUG00000013903)	SOWAHC (ENSSDUG00000013887)	septin10 (ENSSDUG00000013879)
Yellowtail amberjack	MODERN SPECIES	3174	ENSSLDG00000008351	ARSD (ENSSLDG00000008448)	ENSSLDG00000008756	snx4 (ENSSLDG00000008791)	ihha (ENSSLDG00000008837)	BIN1 (ENSSLDG00000008887)	TMEM198 (ENSSLDG00000008991)	desma (ENSSLDG00000009020)	ptprna (ENSSLDG00000009077)	DNAJB2 (ENSSLDG00000009248)	ENSSLDG00000009299	tuba8l2 (ENSSLDG00000009323)	ENSSLDG00000009335	pofut2 (ENSSLDG00000009359)	ENSSLDG00000009411 #21	ENSSLDG00000009597 #22
Barramundi perch	MODERN SPECIES	153	ENSLCAG00010020411	ENSLCAG00010020409	ARSD (ENSLCAG00010020404)	ihha (ENSLCAG00010020398)	BIN1 (ENSLCAG00010020355)	TMEM198 (ENSLCAG00010020342)	desma (ENSLCAG00010020333)	ptprna (ENSLCAG00010020314)	ENSLCAG00010020301	ENSLCAG00010020195	tuba8l5 (ENSLCAG00010020169)	tuba8l2 (ENSLCAG00010020120)	DHDH (ENSLCAG00010020116)	pofut2 (ENSLCAG00010020113)	ABCA12 (ENSLCAG00010020108) #21	BARD1 (ENSLCAG00010020099) #22	vwc2l (ENSLCAG00010020096) #23	IKZF2 (ENSLCAG00010020094) #25	ERBB4 (ENSLCAG00010020008) #26
Pleuronectoidei	ANCESTRAL SPECIES	9	ENSGT00940000156607.a.b	ENSGT00940000159942.a.c.b	ENSGT00940000161140	ENSGT00930000151029.i.a	ENSGT00940000164444.a	ENSGT00950000182882.A.b.b.e	ENSGT00390000016940.c.b.a	ENSGT00940000155522.g.a	ENSGT00940000154095.b.b.a.b	ENSGT00940000160220	ENSGT00950000183165.b.a.e.b.d.a.a.a.a	ENSGT00950000183165.b.a.e.b.d.a.a.a.b	ENSGT00950000183165.a.a.b	ENSGT00390000007989	ENSGT00940000157295 #21	ENSGT00940000156532 #22	ENSGT00720000108792.B #23	ENSGT00940000157137 #25	ENSGT00940000154695.d.a #26	ENSGT00940000157192 #28	ENSGT01030000234570.d.a.o #31	ENSGT00940000156597.a.a ##37	ENSGT00530000063688.a #34	ENSGT00530000065251	ENSGT00710000106813.A	ENSGT00940000160130	ENSGT00940000157406	ENSGT00940000158191.b	ENSGT00940000161561	ENSGT00440000039314.a	ENSGT00950000183003.a.a.b.c.b
Tongue sole	MODERN SPECIES	7	ENSCSEG00000012283	ENSCSEG00000012279	ENSCSEG00000012244	ATP5F1B (ENSCSEG00000012225)	zgc:172182 (ENSCSEG00000012207)	col28a2a (ENSCSEG00000012159)	bbs5 (ENSCSEG00000012139)	klhl41a (ENSCSEG00000012110)	fastkd1 (ENSCSEG00000012089)	PPIG (ENSCSEG00000012078)	dnajb2 (ENSCSEG00000012065)	ENSCSEG00000012035	tuba8l5 (ENSCSEG00000011995)	pofut2 (ENSCSEG00000011964)	ABCA12 (ENSCSEG00000011894) #21	BARD1 (ENSCSEG00000011881) #22	vwc2l (ENSCSEG00000011874) #23	IKZF2 (ENSCSEG00000011862) #25	ERBB4 (ENSCSEG00000011796) #26	zgc:162707 (ENSCSEG00000011776)	ENSCSEG00000011771	ehhadh (ENSCSEG00000011754)	tmem41aa (ENSCSEG00000011740)	igf2bp2a (ENSCSEG00000011718)	tra2b (ENSCSEG00000011697)	ENSCSEG00000011680	ENSCSEG00000011670	glb1l (ENSCSEG00000011644)	ANKZF1 (ENSCSEG00000011588)	ENSCSEG00000011572	ENSCSEG00000011541
Turbot	MODERN SPECIES	5	ENSSMAG00000009766	ENSSMAG00000009725	ENSSMAG00000009712	ENSSMAG00000009689	ENSSMAG00000009633	ihha (ENSSMAG00000036550)	ENSSMAG00000009473	ENSSMAG00000009463	desma (ENSSMAG00000009407)	ptprna (ENSSMAG00000009378)	DNAJB2 (ENSSMAG00000009340)	tuba8l5 (ENSSMAG00000035351)	TUBA4A (ENSSMAG00000037271)	pofut2 (ENSSMAG00000009261)	ABCA12 (ENSSMAG00000009128) #21	BARD1 (ENSSMAG00000009076) #22	vwc2l (ENSSMAG00000009061) #23	IKZF2 (ENSSMAG00000009034) #25	ERBB4 (ENSSMAG00000008828) #26	CPS1 (ENSSMAG00000008581) #28	myl1 (ENSSMAG00000008470) #31	ENSSMAG00000008391 ##37	ENSSMAG00000008354 #34	ENSSMAG00000025937	heg1 (ENSSMAG00000008321)	slc12a8 (ENSSMAG00000008272)	znf148 (ENSSMAG00000008252)	ENSSMAG00000032586	asmt (ENSSMAG00000008163)	akap17a (ENSSMAG00000008159)	SOWAHC (ENSSMAG00000034691)
Eupercaria	ANCESTRAL SPECIES	25	ENSGT00940000161140	ENSGT00940000177459	ENSGT00930000151029.i.a	ENSGT00940000164444.a	ENSGT00950000182882.A.b.b.e	ENSGT00390000016940.c.b.a	ENSGT00940000155522.g.a	ENSGT00940000154095.b.b.a.b	ENSGT00940000160220	ENSGT00950000183165.b.a.e.b.d.a.a.a.a	ENSGT00950000183165.b.a.e.b.d.a.a.a.b	ENSGT00950000183165.a.a.b	ENSGT00390000007946.i.a	ENSGT00390000007989	ENSGT00940000157295 #21	ENSGT00940000156532 #22	ENSGT00720000108792.B #23	ENSGT00940000157137 #25	ENSGT00940000154695.d.a #26	ENSGT00940000157192 #28	ENSGT01030000234570.d.a.o #31	ENSGT00940000156597.a.a ##37	ENSGT00770000121792	ENSGT00530000063688.a #34	ENSGT00530000065251	ENSGT00710000106813.A	ENSGT00940000160130	ENSGT00940000157406	ENSGT00940000158191.b	ENSGT00940000161561	ENSGT00440000039314.a
Tetraodontidae	ANCESTRAL SPECIES		ENSGT00940000159942.a.c.b	ENSGT00940000161140	ENSGT00930000151029.i.a	ENSGT00940000164444.a	ENSGT00950000182882.A.b.b.e	ENSGT00390000016940.c.b.a	ENSGT00940000155522.g.a	ENSGT00940000154095.b.b.a.b	ENSGT00940000160220	ENSGT00950000183165.b.a.e.b.d.a.a.a.a	ENSGT00950000183165.b.a.e.b.d.a.a.a.b	ENSGT00950000183165.a.a.b	ENSGT00390000007946.i.a	ENSGT00390000007989	ENSGT00940000157295 #21	ENSGT00940000156532 #22	ENSGT00720000108792.B #23	ENSGT00940000157137 #25	ENSGT00940000154695.d.a #26	ENSGT00940000157192 #28	ENSGT01030000234570.d.a.o #31	ENSGT00940000156597.a.a ##37	ENSGT00530000063688.a #34	ENSGT00530000065251	ENSGT00710000106813.A	ENSGT00940000160130	ENSGT00940000157406	ENSGT00940000158191.b	ENSGT00940000161561	ENSGT00440000039314.a	ENSGT00950000183003.a.a.b.c.b
Fugu	MODERN SPECIES		ENSTRUG00000029778	ENSTRUG00000028838	ARSD (ENSTRUG00000013350)	snx4 (ENSTRUG00000013470)	ihha (ENSTRUG00000013525)	BIN1 (ENSTRUG00000013580)	TMEM198 (ENSTRUG00000013769)	desma (ENSTRUG00000013833)	ptprna (ENSTRUG00000014006)	DNAJB2 (ENSTRUG00000023546)	tuba8l3 (ENSTRUG00000024775)	TUBA4A (ENSTRUG00000022357)	DHDH (ENSTRUG00000014194)	pofut2 (ENSTRUG00000014241)	ABCA12 (ENSTRUG00000014299) #21	BARD1 (ENSTRUG00000014666) #22	vwc2l (ENSTRUG00000014735) #23	IKZF2 (ENSTRUG00000014740) #25	ERBB4 (ENSTRUG00000008503) #26	CPS1 (ENSTRUG00000007058) #28	myl1 (ENSTRUG00000006953) #31	ENSTRUG00000006821 ##37	ENSTRUG00000029278 ##37	ENSTRUG00000019720 ##37	ENSTRUG00000020723 #34	ENSTRUG00000032795	heg1 (ENSTRUG00000006637)	slc12a8 (ENSTRUG00000006270)	znf148 (ENSTRUG00000021738)	ENSTRUG00000006006	asmt (ENSTRUG00000005861)
Tetraodon	MODERN SPECIES	13	ARSD (ENSTNIG00000016451)	snx4 (ENSTNIG00000016450)	ihha (ENSTNIG00000016449)	BIN1 (ENSTNIG00000016448)	TMEM198 (ENSTNIG00000016447)	desma (ENSTNIG00000016446)	desma (ENSTNIG00000000710)	ptprna (ENSTNIG00000016445)	DNAJB2 (ENSTNIG00000016444)	ENSTNIG00000001232	tuba8l5 (ENSTNIG00000016443)	TUBA4A (ENSTNIG00000016442)	DHDH (ENSTNIG00000000670)	pofut2 (ENSTNIG00000016441)	ABCA12 (ENSTNIG00000016440) #21	BARD1 (ENSTNIG00000016439) #22	vwc2l (ENSTNIG00000016438) #23	IKZF2 (ENSTNIG00000016437) #25	ERBB4 (ENSTNIG00000016436) #26	myl1 (ENSTNIG00000000127) #31	ENSTNIG00000016435 ##37	ENSTNIG00000016434	ENSTNIG00000016433	ENSTNIG00000016432	slc12a8 (ENSTNIG00000016431)	asmt (ENSTNIG00000016429)	akap17a (ENSTNIG00000016428)	SOWAHC (ENSTNIG00000016427)	septin10 (ENSTNIG00000016426)	SH3RF3 (ENSTNIG00000016425)	VGLL3 (ENSTNIG00000016424)
Eupecaria_A	ANCESTRAL SPECIES	24	ENSGT00940000161140	ENSGT00940000177459	ENSGT00930000151029.i.a	ENSGT00940000164444.a	ENSGT00950000182882.A.b.b.e	ENSGT00390000016940.c.b.a	ENSGT00940000155522.g.a	ENSGT00940000154095.b.b.a.b	ENSGT00940000160220	ENSGT00950000183165.b.a.e.b.d.a.a.a.a	ENSGT00950000183165.b.a.e.b.d.a.a.a.b	ENSGT00950000183165.a.a.b	ENSGT00390000007946.i.a	ENSGT00390000007989	ENSGT00940000157295 #21	ENSGT00940000156532 #22	ENSGT00720000108792.B #23	ENSGT00940000157137 #25	ENSGT00940000154695.d.a #26	ENSGT00940000157192 #28	ENSGT01030000234570.d.a.o #31	ENSGT00940000156597.a.a ##37	ENSGT00770000121792	ENSGT00530000063688.a #34	ENSGT00530000065251	ENSGT00710000106813.A	ENSGT00940000160130	ENSGT00940000157406	ENSGT00940000158191.b	ENSGT00940000161561	ENSGT00440000039314.a
Eupecaria_B	ANCESTRAL SPECIES	24	ENSGT00940000161140	ENSGT00940000177459	ENSGT00930000151029.i.a	ENSGT00940000164444.a	ENSGT00950000182882.A.b.b.e	ENSGT00390000016940.c.b.a	ENSGT00940000155522.g.a	ENSGT00940000154095.b.b.a.b	ENSGT00940000160220	ENSGT00950000183165.b.a.e.b.d.a.a.a.a	ENSGT00950000183165.b.a.e.b.d.a.a.a.b	ENSGT00950000183165.a.a.b	ENSGT00390000007946.i.a	ENSGT00390000007989	ENSGT00940000157295 #21	ENSGT00940000156532 #22	ENSGT00720000108792.B #23	ENSGT00940000157137 #25	ENSGT00940000154695.d.a #26	ENSGT00940000157192 #28	ENSGT01030000234570.d.a.o #31	ENSGT00940000156597.a.a ##37	ENSGT00770000121792	ENSGT00530000063688.a #34	ENSGT00530000065251	ENSGT00710000106813.A	ENSGT00940000160130	ENSGT00940000157406	ENSGT00940000158191.b	ENSGT00940000161561	ENSGT00440000039314.a
Eupecaria_C	ANCESTRAL SPECIES	24	ENSGT00940000161140	ENSGT00940000177459	ENSGT00930000151029.i.a	ENSGT00940000164444.a	ENSGT00950000182882.A.b.b.e	ENSGT00390000016940.c.b.a	ENSGT00940000155522.g.a	ENSGT00940000154095.b.b.a.b	ENSGT00940000160220	ENSGT00950000183165.b.a.e.b.d.a.a.a.a	ENSGT00950000183165.b.a.e.b.d.a.a.a.b	ENSGT00950000183165.a.a.b	ENSGT00390000007946.i.a	ENSGT00390000007989	ENSGT00940000157295 #21	ENSGT00940000156532 #22	ENSGT00720000108792.B #23	ENSGT00940000157137 #25	ENSGT00940000154695.d.a #26	ENSGT00940000157192 #28	ENSGT01030000234570.d.a.o #31	ENSGT00940000156597.a.a ##37	ENSGT00770000121792	ENSGT00530000063688.a #34	ENSGT00530000065251	ENSGT00710000106813.A	ENSGT00940000160130	ENSGT00940000157406	ENSGT00940000158191.b	ENSGT00940000161561	ENSGT00440000039314.a
Eupercaria_incertae_sedis	ANCESTRAL SPECIES	24	ENSGT00940000161140	ENSGT00940000177459	ENSGT00930000151029.i.a	ENSGT00940000164444.a	ENSGT00950000182882.A.b.b.e	ENSGT00390000016940.c.b.a	ENSGT00940000155522.g.a	ENSGT00940000154095.b.b.a.b	ENSGT00940000160220	ENSGT00950000183165.b.a.e.b.d.a.a.a.a	ENSGT00950000183165.b.a.e.b.d.a.a.a.b	ENSGT00950000183165.a.b	ENSGT00950000183165.a.a.b	ENSGT00390000007989	ENSGT00940000157295 #21	ENSGT00940000156532 #22	ENSGT00720000108792.B #23	ENSGT00940000157137 #25	ENSGT00940000154695.d.a #26	ENSGT00940000157192 #28	ENSGT01030000234570.d.a.o #31	ENSGT00940000156597.a.a ##37	ENSGT00770000121792	ENSGT00530000063688.a #34	ENSGT00530000065251	ENSGT00710000106813.A	ENSGT00940000160130	ENSGT00940000157406	ENSGT00940000158191.b	ENSGT00940000161561	ENSGT00440000039314.a
Large yellow croaker	MODERN SPECIES	490	ENSLCRG00005000815	ENSLCRG00005022015	ARSD (ENSLCRG00005021977)	ENSLCRG00005021966	snx4 (ENSLCRG00005021921)	ihha (ENSLCRG00005021917)	BIN1 (ENSLCRG00005021889)	TMEM198 (ENSLCRG00005021883)	desma (ENSLCRG00005021870)	ptprna (ENSLCRG00005021854)	ENSLCRG00005021852	ENSLCRG00005021851	ENSLCRG00005021848	pofut2 (ENSLCRG00005021846)	ABCA12 (ENSLCRG00005021725) #21	BARD1 (ENSLCRG00005021702) #22	vwc2l (ENSLCRG00005021700) #23	IKZF2 (ENSLCRG00005021694) #25	ERBB4 (ENSLCRG00005017119) #26	CPS1 (ENSLCRG00005016975) #28	myl1 (ENSLCRG00005016962) #31	ENSLCRG00005016961 ##37	ENSLCRG00005016960 ##37	ENSLCRG00005016959	ENSLCRG00005016957 #34	ENSLCRG00005016956	slc12a8 (ENSLCRG00005016955)	znf148 (ENSLCRG00005016953)	ENSLCRG00005016952	ENSLCRG00005016951	asmt (ENSLCRG00005016950)
European seabass	MODERN SPECIES	5	ENSDLAG00005011609	ENSDLAG00005011575	ENSDLAG00005011314	ihha (ENSDLAG00005033424)	ENSDLAG00005010771	ENSDLAG00005010656	desma (ENSDLAG00005010084)	ptprna (ENSDLAG00005009412)	DNAJB2 (ENSDLAG00005009375)	ENSDLAG00005032431	tuba8l5 (ENSDLAG00005031330)	TUBA4A (ENSDLAG00005028556)	pofut2 (ENSDLAG00005009262)	ENSDLAG00005008372 #21	ENSDLAG00005008321	BARD1 (ENSDLAG00005008303) #22	ENSDLAG00005033668	vwc2l (ENSDLAG00005029709) #23	IKZF2 (ENSDLAG00005008275) #25	ERBB4 (ENSDLAG00005006224) #26	CPS1 (ENSDLAG00005003390) #28	myl1 (ENSDLAG00005002632) #31	ENSDLAG00005002268 ##37	ENSDLAG00005029565 #34	ENSDLAG00005002261	heg1 (ENSDLAG00005032478)	slc12a8 (ENSDLAG00005002202)	znf148 (ENSDLAG00005029346)	ENSDLAG00005028574	asmt (ENSDLAG00005002177)	akap17a (ENSDLAG00005002170)
Gilthead seabream	DUPLICATION
Gilthead seabream	MODERN SPECIES	19	wdr54 (ENSSAUG00010024047)	ENSSAUG00010024045	ENSSAUG00010024044	ENSSAUG00010024043	nol6 (ENSSAUG00010023590)	aqp3a (ENSSAUG00010023560)	ENSSAUG00010023559	ENSSAUG00010023556	ENSSAUG00010023554	ENSSAUG00010023551	ENSSAUG00010023550	ENSSAUG00010023542	nr2f1a (ENSSAUG00010023517)	fam172a (ENSSAUG00010023504)	KIAA0825 (ENSSAUG00010023494)	ENSSAUG00010023493 #22	MCTP1 (ENSSAUG00010023308)	FAM81B (ENSSAUG00010023301)	gig2p (ENSSAUG00010023299)	gig2p (ENSSAUG00010023298)	gig2p (ENSSAUG00010023296)	SKIC3 (ENSSAUG00010023291)	arsk (ENSSAUG00010023285)	arrdc3a (ENSSAUG00010023280)	adgrv1 (ENSSAUG00010023260)	lysmd3 (ENSSAUG00010023252)	ENSSAUG00010023250	mblac2 (ENSSAUG00010023248)	rtkna (ENSSAUG00010023238)	smn1 (ENSSAUG00010023237)	hspb11 (ENSSAUG00010023236)
Gilthead seabream	MODERN SPECIES	23	ARSD (ENSSAUG00010027621)	ENSSAUG00010027623	snx4 (ENSSAUG00010027627)	ihha (ENSSAUG00010027629)	BIN1 (ENSSAUG00010027643)	TMEM198 (ENSSAUG00010027664)	DES (ENSSAUG00010027667)	ptprna (ENSSAUG00010027671)	ENSSAUG00010027677	ENSSAUG00010027678	tuba8l5 (ENSSAUG00010027679)	TUBA4A (ENSSAUG00010027680)	DHDH (ENSSAUG00010004096)	pofut2 (ENSSAUG00010004246)	ABCA12 (ENSSAUG00010004747) #21	BARD1 (ENSSAUG00010004792) #22	vwc2l (ENSSAUG00010004794) #23	IKZF2 (ENSSAUG00010004795) #25	ERBB4 (ENSSAUG00010004938) #26	CPS1 (ENSSAUG00010010140) #28	myl1 (ENSSAUG00010015082) #31	ENSSAUG00010015084 ##37	ENSSAUG00010015086 #34	ENSSAUG00010015091	ENSSAUG00010015092	heg1 (ENSSAUG00010015096)	slc12a8 (ENSSAUG00010015099)	znf148 (ENSSAUG00010015104)	ENSSAUG00010015105	asmt (ENSSAUG00010015107)	akap17a (ENSSAUG00010015110)
Perciformes	ANCESTRAL SPECIES	23	ENSGT00940000159942.a.c.b	ENSGT00940000161140	ENSGT00930000151029.i.a	ENSGT00940000164444.a	ENSGT00950000182882.A.b.b.e	ENSGT00390000016940.c.b.a	ENSGT00940000155522.g.a	ENSGT00940000154095.b.b.a.b	ENSGT00940000160220	ENSGT00950000183165.b.a.e.b.d.a.a.a.a	ENSGT00950000183165.b.a.e.b.d.a.a.a.b	ENSGT00950000183165.a.a.b	ENSGT00390000007946.i.a	ENSGT00390000007989	ENSGT00940000157295 #21	ENSGT00940000156532 #22	ENSGT00720000108792.B #23	ENSGT00940000157137 #25	ENSGT00940000154695.d.a #26	ENSGT00940000157192 #28	ENSGT01030000234570.d.a.o #31	ENSGT00940000156597.a.a ##37	ENSGT00530000063688.a #34	ENSGT00530000065251	ENSGT00710000106813.A	ENSGT00940000160130	ENSGT00940000157406	ENSGT00940000158191.b	ENSGT00940000161561	ENSGT00440000039314.a	ENSGT00950000183003.a.a.b.c.b
Cottioidei	ANCESTRAL SPECIES	14	ENSGT00940000156607.a.b	ENSGT00940000159942.a.c.b	ENSGT00940000161140	ENSGT00930000151029.i.a	ENSGT00940000164444.a	ENSGT00950000182882.A.b.b.e	ENSGT00390000016940.c.b.a	ENSGT00940000155522.g.a	ENSGT00940000154095.b.b.a.b	ENSGT00940000160220	ENSGT00950000183165.b.a.e.b.d.a.a.a.a	ENSGT00950000183165.a.a.b	ENSGT00390000007946.i.a	ENSGT00390000007989	ENSGT00940000157295 #21	ENSGT00940000156532 #22	ENSGT00720000108792.B #23	ENSGT00940000157137 #25	ENSGT00940000154695.d.a #26	ENSGT00940000157192 #28	ENSGT01030000234570.d.a.o #31	ENSGT00940000156597.a.a ##37	ENSGT00530000065251	ENSGT00710000106813.A	ENSGT00940000160130	ENSGT00940000157406	ENSGT00940000158191.b	ENSGT00940000161561	ENSGT00440000039314.a	ENSGT00950000183003.a.a.b.c.b	ENSGT00940000155238
Stickleback	MODERN SPECIES	16	ENSGACG00000006317	ARSD (ENSGACG00000006325)	ENSGACG00000006329	snx4 (ENSGACG00000006333)	ihha (ENSGACG00000006349)	BIN1 (ENSGACG00000006360)	TMEM198 (ENSGACG00000006373)	desma (ENSGACG00000006376)	ptprna (ENSGACG00000006392)	DNAJB2 (ENSGACG00000006408)	ENSGACG00000006417	tuba8l2 (ENSGACG00000006424)	ENSGACG00000006433	pofut2 (ENSGACG00000006465)	ABCA12 (ENSGACG00000006476) #21	ENSGACG00000006488 #22	vwc2l (ENSGACG00000006493) #23	IKZF2 (ENSGACG00000006496) #25	ERBB4 (ENSGACG00000006497) #26	CPS1 (ENSGACG00000006528) #28	myl1 (ENSGACG00000006539) #31	ENSGACG00000006588 ##37	ENSGACG00000006594	ENSGACG00000006597	ENSGACG00000006603	ENSGACG00000006605	ENSGACG00000006612	slc12a8 (ENSGACG00000006616)	ENSGACG00000006618	asmt (ENSGACG00000006621)	akap17a (ENSGACG00000006627)
Lumpfish	MODERN SPECIES	13	ENSCLMG00005022246	ENSCLMG00005022247	ARSD (ENSCLMG00005022248)	snx4 (ENSCLMG00005022249)	ihha (ENSCLMG00005022296)	BIN1 (ENSCLMG00005022301)	TMEM198 (ENSCLMG00005022344)	desma (ENSCLMG00005022347)	ptprna (ENSCLMG00005022348)	ENSCLMG00005022351	tuba8l5 (ENSCLMG00005022354)	tuba8l5 (ENSCLMG00005022356)	TUBA4A (ENSCLMG00005022357)	pofut2 (ENSCLMG00005022359)	ABCA12 (ENSCLMG00005022364) #21	BARD1 (ENSCLMG00005022393) #22	vwc2l (ENSCLMG00005022395) #23	IKZF2 (ENSCLMG00005022396) #25	ERBB4 (ENSCLMG00005022486) #26	CPS1 (ENSCLMG00005023064) #28	myl1 (ENSCLMG00005023067) #31	ENSCLMG00005023071 ##37	ENSCLMG00005023072 ##37	ENSCLMG00005023073	heg1 (ENSCLMG00005023075)	slc12a8 (ENSCLMG00005023076)	znf148 (ENSCLMG00005023077)	ENSCLMG00005023079	asmt (ENSCLMG00005023080)	akap17a (ENSCLMG00005023081)	SOWAHC (ENSCLMG00005023082)
Perciformes_a	ANCESTRAL SPECIES	23	ENSGT00940000159942.a.c.b	ENSGT00940000161140	ENSGT00930000151029.i.a	ENSGT00940000164444.a	ENSGT00950000182882.A.b.b.e	ENSGT00390000016940.c.b.a	ENSGT00940000155522.g.a	ENSGT00940000154095.b.b.a.b	ENSGT00940000154205	ENSGT00940000160220	ENSGT00950000183165.b.a.e.b.d.a.a.a.a	ENSGT00950000183165.b.a.e.b.d.a.a.a.b	ENSGT00950000183165.a.a.b	ENSGT00390000007989	ENSGT00940000157295 #21	ENSGT00940000156532 #22	ENSGT00720000108792.B #23	ENSGT00940000157137 #25	ENSGT00940000154695.d.a #26	ENSGT00940000157192 #28	ENSGT01030000234570.d.a.o #31	ENSGT00940000156597.a.a ##37	ENSGT00530000063688.a #34	ENSGT00530000065251	ENSGT00710000106813.A	ENSGT00940000160130	ENSGT00940000157406	ENSGT00940000158191.b	ENSGT00940000161561	ENSGT00440000039314.a	ENSGT00950000183003.a.a.b.c.b
Channel bull blenny	MODERN SPECIES	13	ENSCGOG00000014280	ENSCGOG00000014263	ARSD (ENSCGOG00000014238)	snx4 (ENSCGOG00000014179)	ihha (ENSCGOG00000014176)	BIN1 (ENSCGOG00000013357)	TMEM198 (ENSCGOG00000013340)	desma (ENSCGOG00000013279)	DNAJB2 (ENSCGOG00000013271)	ENSCGOG00000013158	tuba8l5 (ENSCGOG00000013056)	TUBA4A (ENSCGOG00000018472)	ENSCGOG00000018465	pofut2 (ENSCGOG00000018312)	ENSCGOG00000018299 #21	BARD1 (ENSCGOG00000018298) #22	vwc2l (ENSCGOG00000018295) #23	IKZF2 (ENSCGOG00000018289) #25	ERBB4 (ENSCGOG00000018283) #26	CPS1 (ENSCGOG00000015493) #28	myl1 (ENSCGOG00000015409) #31	ENSCGOG00000015408 ##37	ENSCGOG00000015403 ##37	ENSCGOG00000015398 #34	ENSCGOG00000015395	heg1 (ENSCGOG00000015387)	slc12a8 (ENSCGOG00000015369)	znf148 (ENSCGOG00000015362)	ENSCGOG00000015360	asmt (ENSCGOG00000015354)	akap17a (ENSCGOG00000015346)
Pike perch	MODERN SPECIES	1	ENSSLUG00000008514	ENSSLUG00000008525	ARSD (ENSSLUG00000008540)	snx4 (ENSSLUG00000008616)	ihha (ENSSLUG00000009088)	BIN1 (ENSSLUG00000009114)	TMEM198 (ENSSLUG00000009449)	desma (ENSSLUG00000009462)	ptprna (ENSSLUG00000009513)	ENSSLUG00000009986	ENSSLUG00000009994	tuba8l5 (ENSSLUG00000009997)	TUBA4A (ENSSLUG00000010004)	pofut2 (ENSSLUG00000010025)	ABCA12 (ENSSLUG00000010362) #21	BARD1 (ENSSLUG00000010398) #22	vwc2l (ENSSLUG00000010403) #23	IKZF2 (ENSSLUG00000010407) #25	ERBB4 (ENSSLUG00000010427) #26
Ballan wrasse	DUPLICATION
Ballan wrasse	MODERN SPECIES	436													fam172a (ENSLBEG00000018445)	KIAA0825 (ENSLBEG00000018519)	ENSLBEG00000018591	ENSLBEG00000018607 #22	MCTP1 (ENSLBEG00000018645)	ENSLBEG00000018748	gig2p (ENSLBEG00000018765)	gig2p (ENSLBEG00000018778)	SKIC3 (ENSLBEG00000018829)	arsk (ENSLBEG00000019203)	arrdc3a (ENSLBEG00000019244)	ENSLBEG00000019281
Ballan wrasse	MODERN SPECIES	80	ENSLBEG00000003991	ENSLBEG00000003950	snx4 (ENSLBEG00000003869)	ihha (ENSLBEG00000003801)	BIN1 (ENSLBEG00000003681)	TMEM198 (ENSLBEG00000003600)	desma (ENSLBEG00000003540)	ptprna (ENSLBEG00000003358)	DNAJB2 (ENSLBEG00000003275)	ENSLBEG00000003251	tuba8l5 (ENSLBEG00000002892)	TUBA4A (ENSLBEG00000002847)	DHDH (ENSLBEG00000002826)	pofut2 (ENSLBEG00000002774)	ABCA12 (ENSLBEG00000002654) #21	BARD1 (ENSLBEG00000002588) #22	vwc2l (ENSLBEG00000002560) #23	IKZF2 (ENSLBEG00000002545) #25	ERBB4 (ENSLBEG00000002429) #26	CPS1 (ENSLBEG00000002329) #28	myl1 (ENSLBEG00000002248) #31	ENSLBEG00000002169 ##37	ENSLBEG00000002125	ENSLBEG00000002108 #34	heg1 (ENSLBEG00000002092)	slc12a8 (ENSLBEG00000002062)	znf148 (ENSLBEG00000001953)	ENSLBEG00000001914	asmt (ENSLBEG00000001868)	akap17a (ENSLBEG00000001841)	SOWAHC (ENSLBEG00000001780)
Elephant shark	MODERN SPECIES	1499	MYO1B (ENSCMIG00000015535)	nabp1a (ENSCMIG00000015674)	cavin2b (ENSCMIG00000015677)	tmeff2a (ENSCMIG00000015681)	slc39a10 (ENSCMIG00000015687)	ENSCMIG00000015692	DNAH7 (ENSCMIG00000015738)	STK17B (ENSCMIG00000015874)	HECW2 (ENSCMIG00000015909)	gtf3c3 (ENSCMIG00000015942)	PGAP1 (ENSCMIG00000015956)	ANKRD44 (ENSCMIG00000016004)	ENSCMIG00000016093	fn1a (ENSCMIG00000016384) #19	atic (ENSCMIG00000017198) #20	ENSCMIG00000017271 #22	vwc2l (ENSCMIG00000017273) #23
Cyclostomata	ANCESTRAL SPECIES	424																ENSGT00940000156532 #22	ENSGT00940000156031
Lamprey	MODERN SPECIES	6032																ENSPMAG00000009500 #22	ENSPMAG00000009497
Hagfish	DUPLICATION
Hagfish	MODERN SPECIES	947																ENSEBUG00000006145 #22	MCTP1 (ENSEBUG00000008969)
Hagfish	MODERN SPECIES	270	hhatlb (ENSEBUG00000003675)	ENSEBUG00000002234	ENSEBUG00000000534	ENSEBUG00000015242	faimb (ENSEBUG00000007905)	abcf2a (ENSEBUG00000007700)	ENSEBUG00000013857	park7 (ENSEBUG00000004248)	ENSEBUG00000005562	ENSEBUG00000006332	ENSEBUG00000005907	ENSEBUG00000013784	ENSEBUG00000014216	ENSEBUG00000008507	ENSEBUG00000015645 ##31	ENSEBUG00000008029 #22	ENSEBUG00000013092	ENSEBUG00000005939