Clupeocephala	DUPLICATION
Clupeocephala	ANCESTRAL SPECIES		ENSGT01060000248564.a.b #8	ENSGT00940000158787 #9	ENSGT00940000159442 #10	ENSGT01030000235133	ENSGT01090000260070.C.a #11	ENSGT00390000017974.nb #12	ENSGT00950000183031.A.a.a #13	ENSGT00940000165372 #14	ENSGT00390000005813 #15	ENSGT00950000183028.a.b.a #16	ENSGT00940000158871 #17	ENSGT00810000125524 #18	ENSGT00390000003012 #19	ENSGT00940000156553 #20	ENSGT00940000159398 #21	ENSGT00950000182941.a.a.b.e.a.b #22	ENSGT00950000183163.a.a.ab #23	ENSGT00940000160627 #24	ENSGT00940000154096.b.b.b.b.b #25	ENSGT00950000182986.b #26	ENSGT00390000004808.e #27	ENSGT00390000001737 #29	ENSGT00940000158915 #30	ENSGT00940000159465 #31	ENSGT00940000155107.a.a.a #32	ENSGT00990000203803 #34	ENSGT00940000156762 #35	ENSGT00940000157291 #36	ENSGT00390000015364.b #37	ENSGT00390000016054.b.i	ENSGT00940000153295.a.a
Euteleosteomorpha	ANCESTRAL SPECIES	13	ENSGT01060000248564.a.b #8	ENSGT00940000158787 #9	ENSGT00940000159442 #10	ENSGT01030000235133	ENSGT01090000260070.C.a #11	ENSGT00390000017974.nb #12	ENSGT00950000183031.A.a.a #13	ENSGT00940000165372 #14	ENSGT00390000005813 #15	ENSGT00950000183028.a.b.a #16	ENSGT00940000158871 #17	ENSGT00810000125524 #18	ENSGT00390000003012 #19	ENSGT00940000156553 #20	ENSGT00940000159398 #21	ENSGT00950000182941.a.a.b.e.a.b #22	ENSGT00950000183163.a.a.ab #23	ENSGT00940000160627 #24	ENSGT00940000154096.b.b.b.b.b #25	ENSGT00950000182986.b #26	ENSGT00390000004808.e #27	ENSGT01030000235168	ENSGT00390000001737 #29	ENSGT00940000158915 #30	ENSGT00940000159465 #31	ENSGT00940000155107.a.a.a #32	ENSGT00990000203803 #34	ENSGT00940000156762 #35	ENSGT00940000157291 #36	ENSGT00390000015364.b #37	ENSGT00390000016054.b.i
Acanthomorphata	ANCESTRAL SPECIES	38	ENSGT00530000063881.a.b #7	ENSGT01060000248564.a.b #8	ENSGT00940000158787 #9	ENSGT00940000159442 #10	ENSGT01090000260070.C.a #11	ENSGT00390000017974.nb #12	ENSGT00950000183031.A.a.a #13	ENSGT00940000165372 #14	ENSGT00390000005813 #15	ENSGT00950000183028.a.b.a #16	ENSGT00940000158871 #17	ENSGT00810000125524 #18	ENSGT00390000003012 #19	ENSGT00940000156553 #20	ENSGT00940000159398 #21	ENSGT00950000182941.a.a.b.e.a.b #22	ENSGT00950000183163.a.a.ab #23	ENSGT00940000160627 #24	ENSGT00940000154096.b.b.b.b.b #25	ENSGT00950000182986.b #26	ENSGT00390000004808.e #27	ENSGT01100000263479.H.c.b	ENSGT01100000263479.H.c.a.a	ENSGT01100000263479.G	ENSGT00950000183199.a.b	ENSGT00940000177028	ENSGT00940000163576	ENSGT00940000161202	ENSGT00390000001737 #29	ENSGT00940000158915 #30	ENSGT00940000159465 #31
Euacanthomorphacea	ANCESTRAL SPECIES		ENSGT00530000063881.a.b #7	ENSGT01060000248564.a.b #8	ENSGT00940000158787 #9	ENSGT00940000159442 #10	ENSGT01090000260070.C.a #11	ENSGT00390000017974.nb #12	ENSGT00950000183031.A.a.a #13	ENSGT00940000165372 #14	ENSGT00390000005813 #15	ENSGT00950000183028.a.b.a #16	ENSGT00940000158871 #17	ENSGT00810000125524 #18	ENSGT00390000003012 #19	ENSGT00940000156553 #20	ENSGT00940000159398 #21	ENSGT00950000182941.a.a.b.e.a.b #22	ENSGT00950000183163.a.a.ab #23	ENSGT00940000160627 #24	ENSGT00940000154096.b.b.b.b.b #25	ENSGT00950000182986.b #26	ENSGT00390000004808.e #27	ENSGT00940000166129 #28	ENSGT00390000001737 #29	ENSGT00940000158915 #30	ENSGT00940000159465 #31	ENSGT00940000155107.a.a.a #32	ENSGT00990000203803 #34	ENSGT00940000156762 #35	ENSGT00940000157291 #36	ENSGT00390000015364.b #37	ENSGT00390000016054.b.i
Percomorphaceae	ANCESTRAL SPECIES		ENSGT00530000063881.a.b #7	ENSGT01060000248564.a.b #8	ENSGT00940000158787 #9	ENSGT00940000159442 #10	ENSGT01090000260070.C.a #11	ENSGT00390000017974.nb #12	ENSGT00950000183031.A.a.a #13	ENSGT00940000165372 #14	ENSGT00390000005813 #15	ENSGT00950000183028.a.b.a #16	ENSGT00940000158871 #17	ENSGT00810000125524 #18	ENSGT00390000003012 #19	ENSGT00940000156553 #20	ENSGT00940000159398 #21	ENSGT00950000182941.a.a.b.e.a.b #22	ENSGT00950000183163.a.a.ab #23	ENSGT00940000160627 #24	ENSGT00940000154096.b.b.b.b.b #25	ENSGT00950000182986.b #26	ENSGT00390000004808.e #27	ENSGT00940000166129 #28	ENSGT00390000001737 #29	ENSGT00940000158915 #30	ENSGT00940000159465 #31	ENSGT00940000155107.a.a.a #32	ENSGT00990000203803 #34	ENSGT00940000156762 #35	ENSGT00940000157291 #36	ENSGT00390000015364.b #37	ENSGT00390000016054.b.i
Percomorphaceae_B	ANCESTRAL SPECIES	1	ENSGT00530000063881.a.b #7	ENSGT01060000248564.a.b #8	ENSGT00940000158787 #9	ENSGT00940000159442 #10	ENSGT01090000260070.C.a #11	ENSGT00390000017974.nb #12	ENSGT00950000183031.A.a.a #13	ENSGT00940000165372 #14	ENSGT00390000005813 #15	ENSGT00950000183028.a.b.a #16	ENSGT00940000158871 #17	ENSGT00810000125524 #18	ENSGT00390000003012 #19	ENSGT00940000156553 #20	ENSGT00940000159398 #21	ENSGT00950000182941.a.a.b.e.a.b #22	ENSGT00950000183163.a.a.ab #23	ENSGT00940000160627 #24	ENSGT00940000154096.b.b.b.b.b #25	ENSGT00950000182986.b #26	ENSGT00390000004808.e #27	ENSGT00940000166129 #28	ENSGT00390000001737 #29	ENSGT00940000158915 #30	ENSGT00530000068429	ENSGT00940000159465 #31	ENSGT00940000155107.a.a.a #32	ENSGT00990000204035 #33	ENSGT00940000156762 #35	ENSGT00940000157291 #36	ENSGT00390000015364.b #37
Percomorphaceae_C	ANCESTRAL SPECIES	2	ENSGT00530000063881.a.b #7	ENSGT01060000248564.a.b #8	ENSGT00940000158787 #9	ENSGT00940000159442 #10	ENSGT01090000260070.C.a #11	ENSGT00390000017974.nb #12	ENSGT00950000183031.A.a.a #13	ENSGT00940000165372 #14	ENSGT00390000005813 #15	ENSGT00950000183028.a.b.a #16	ENSGT00940000158871 #17	ENSGT00810000125524 #18	ENSGT00390000003012 #19	ENSGT00940000156553 #20	ENSGT00940000159398 #21	ENSGT00950000182941.a.a.b.e.a.b #22	ENSGT00950000183163.a.a.ab #23	ENSGT00940000160627 #24	ENSGT00940000154096.b.b.b.b.b #25	ENSGT00950000182986.b #26	ENSGT00390000004808.e #27	ENSGT00940000166129 #28	ENSGT00390000001737 #29	ENSGT00940000158915 #30	ENSGT00530000068429	ENSGT00940000159465 #31	ENSGT00940000155107.a.a.a #32	ENSGT00990000204035 #33	ENSGT00940000156762 #35	ENSGT00940000157291 #36	ENSGT00390000015364.b #37
Percomorphaceae_D	ANCESTRAL SPECIES	2	ENSGT00530000063881.a.b #7	ENSGT01060000248564.a.b #8	ENSGT00940000158787 #9	ENSGT00940000159442 #10	ENSGT01090000260070.C.a #11	ENSGT00390000017974.nb #12	ENSGT00950000183031.A.a.a #13	ENSGT00940000165372 #14	ENSGT00390000005813 #15	ENSGT00950000183028.a.b.a #16	ENSGT00940000158871 #17	ENSGT00810000125524 #18	ENSGT00390000003012 #19	ENSGT00940000156553 #20	ENSGT00940000159398 #21	ENSGT00950000182941.a.a.b.e.a.b #22	ENSGT00950000183163.a.a.ab #23	ENSGT00940000160627 #24	ENSGT00940000154096.b.b.b.b.b #25	ENSGT00950000182986.b #26	ENSGT00390000004808.e #27	ENSGT00940000166129 #28	ENSGT00390000001737 #29	ENSGT00940000158915 #30	ENSGT00940000159465 #31	ENSGT00940000155107.a.a.a #32	ENSGT00990000204035 #33	ENSGT00990000203803 #34	ENSGT00940000156762 #35	ENSGT00940000157291 #36	ENSGT00390000015364.b #37
Anabantaria	ANCESTRAL SPECIES	2	ENSGT00940000160519.a.a	ENSGT00530000063881.a.b #7	ENSGT01060000248564.a.b #8	ENSGT00940000158787 #9	ENSGT00940000159442 #10	ENSGT01090000260070.C.a #11	ENSGT00390000017974.nb #12	ENSGT00940000165372 #14	ENSGT00390000005813 #15	ENSGT00950000183028.a.b.a #16	ENSGT00940000158871 #17	ENSGT00810000125524 #18	ENSGT00390000003012 #19	ENSGT00940000156553 #20	ENSGT00940000159398 #21	ENSGT00950000182941.a.a.b.e.a.b #22	ENSGT00950000183163.a.a.ab #23	ENSGT00940000160627 #24	ENSGT00940000154096.b.b.b.b.b #25	ENSGT00950000182986.b #26	ENSGT00390000004808.e #27	ENSGT00940000166129 #28	ENSGT00390000001737 #29	ENSGT00940000158915.u #30	ENSGT00940000159465 #31	ENSGT00940000155107.a.a.a #32	ENSGT00990000204035 #33	ENSGT00940000156762 #35	ENSGT00940000157291 #36	ENSGT00390000015364.b #37	ENSGT00390000016054.b.i
Anabantoidei	ANCESTRAL SPECIES	3	ENSGT00940000160519.a.a	ENSGT00530000063881.a.b #7	ENSGT01060000248564.a.b #8	ENSGT00940000158787 #9	ENSGT00940000159442 #10	ENSGT01090000260070.C.a #11	ENSGT00390000017974.nb #12	ENSGT00950000183031.A.a.a #13	ENSGT00390000005813 #15	ENSGT00950000183028.a.b.a #16	ENSGT00940000158871 #17	ENSGT00810000125524 #18	ENSGT00390000003012 #19	ENSGT00940000156553 #20	ENSGT00940000159398 #21	ENSGT00950000182941.a.a.b.e.a.b #22	ENSGT00950000183163.a.a.ab #23	ENSGT00940000160627 #24	ENSGT00940000154096.b.b.b.b.b #25	ENSGT00950000182986.b #26	ENSGT00390000004808.e #27	ENSGT00940000166129 #28	ENSGT00390000001737 #29	ENSGT00940000158915.u #30	ENSGT00940000159465 #31	ENSGT00940000155107.a.a.a #32	ENSGT00990000204035 #33	ENSGT00940000156762 #35	ENSGT00940000157291 #36	ENSGT00390000015364.b #37	ENSGT00390000016054.b.i
Siamese fighting fish	MODERN SPECIES	7	SRSF10 (ENSBSLG00000020961)	pnrc2 (ENSBSLG00000020985) #7	cnr2 (ENSBSLG00000021011) #8	akirin1 (ENSBSLG00000021034) #9	rhbdl2 (ENSBSLG00000021070) #10	GJA9 (ENSBSLG00000021090) #11	MYCBP (ENSBSLG00000021126) #12	rragca (ENSBSLG00000021174) #13	utp11 (ENSBSLG00000021215) #15	FHL3 (ENSBSLG00000021242) #16	rspo1 (ENSBSLG00000021269) #17	gnl2 (ENSBSLG00000021296) #18	dnali1 (ENSBSLG00000021397) #19	SNIP1 (ENSBSLG00000021403) #20	ENSBSLG00000021441 #21	MAP7D1 (ENSBSLG00000021885) #22	THRAP3 (ENSBSLG00000021912) #23	sh3d21 (ENSBSLG00000021927) #24	eva1ba (ENSBSLG00000021956) #25	STK40 (ENSBSLG00000021978) #26	OSCP1 (ENSBSLG00000022030) #27	ENSBSLG00000022016	mrps15 (ENSBSLG00000022038) #29	csf3r (ENSBSLG00000022045) #30	GRIK3 (ENSBSLG00000022127) #31	ENSBSLG00000022266	ZC3H12A (ENSBSLG00000022267) #32	ENSBSLG00000022271 #33	INPP5B (ENSBSLG00000022431) #35	mtf1 (ENSBSLG00000022933) #36	yrdc (ENSBSLG00000022987) #37
Zig-zag eel	MODERN SPECIES	7	ENSMAMG00000008128	ENSMAMG00000008111	pnrc2 (ENSMAMG00000008081) #7	cnr2 (ENSMAMG00000008073) #8	akirin1 (ENSMAMG00000008054) #9	rhbdl2 (ENSMAMG00000026530) #10	ENSMAMG00000008023 #12	rragca (ENSMAMG00000007964) #13	pou3f1 (ENSMAMG00000007950) #14	utp11 (ENSMAMG00000007927) #15	FHL3 (ENSMAMG00000007894) #16	rspo1 (ENSMAMG00000007882) #17	gnl2 (ENSMAMG00000007823) #18	dnali1 (ENSMAMG00000027064) #19	ENSMAMG00000007781 #21	MAP7D1 (ENSMAMG00000007741) #22	THRAP3 (ENSMAMG00000007707) #23	sh3d21 (ENSMAMG00000007666) #24	eva1ba (ENSMAMG00000007649) #25	STK40 (ENSMAMG00000007611) #26	OSCP1 (ENSMAMG00000007603) #27	ENSMAMG00000007593	mrps15 (ENSMAMG00000007572) #29	csf3r (ENSMAMG00000007544) #30	GRIK3 (ENSMAMG00000007505) #31	ZC3H12A (ENSMAMG00000007494) #32	INPP5B (ENSMAMG00000007345) #35	mtf1 (ENSMAMG00000007324) #36	yrdc (ENSMAMG00000028078) #37	MANEAL (ENSMAMG00000007300)	ENSMAMG00000007271
Carangaria	ANCESTRAL SPECIES	1	ENSGT00530000063881.a.b #7	ENSGT01060000248564.a.b #8	ENSGT00940000158787 #9	ENSGT00940000159442 #10	ENSGT01090000260070.C.a #11	ENSGT00390000017974.nb #12	ENSGT00950000183031.A.a.a #13	ENSGT00940000165372 #14	ENSGT00390000005813 #15	ENSGT00950000183028.a.b.a #16	ENSGT00940000158871 #17	ENSGT00810000125524 #18	ENSGT00390000003012 #19	ENSGT00940000156553 #20	ENSGT00940000159398 #21	ENSGT00950000182941.a.a.b.e.a.b #22	ENSGT00950000183163.a.a.ab #23	ENSGT00940000160627 #24	ENSGT00940000154096.b.b.b.b.b #25	ENSGT00950000182986.b #26	ENSGT00390000004808.e #27	ENSGT00940000166129 #28	ENSGT00390000001737 #29	ENSGT00940000158915 #30	ENSGT00940000159465 #31	ENSGT00940000155107.a.a.a #32	ENSGT00990000203803 #34	ENSGT00940000156762 #35	ENSGT00940000157291 #36	ENSGT00390000015364.b #37	ENSGT00390000016054.b.i
Carangaria_A	ANCESTRAL SPECIES	27	ENSGT00530000063881.a.b #7	ENSGT01060000248564.a.b #8	ENSGT00940000158787 #9	ENSGT00940000159442 #10	ENSGT01090000260070.C.a #11	ENSGT00390000017974.nb #12	ENSGT00950000183031.A.a.a #13	ENSGT00940000165372 #14	ENSGT00390000005813 #15	ENSGT00950000183028.a.b.a #16	ENSGT00940000158871 #17	ENSGT00810000125524 #18	ENSGT00390000003012 #19	ENSGT00940000156553 #20	ENSGT00940000159398 #21	ENSGT00950000182941.a.a.b.e.a.b #22	ENSGT00950000183163.a.a.ab #23	ENSGT00940000160627 #24	ENSGT00940000154096.b.b.b.b.b #25	ENSGT00950000182986.b #26	ENSGT00390000004808.e #27	ENSGT00940000166129 #28	ENSGT00390000001737 #29	ENSGT00940000158915 #30	ENSGT00940000159465 #31	ENSGT00940000155107.a.a.a #32	ENSGT00990000203803 #34	ENSGT00940000156762 #35	ENSGT00940000157291 #36	ENSGT00390000015364.b #37	ENSGT00390000016054.b.i
Barramundi perch	MODERN SPECIES	104	pnrc2 (ENSLCAG00010003408) #7	cnr2 (ENSLCAG00010003413) #8	akirin1 (ENSLCAG00010003420) #9	rhbdl2 (ENSLCAG00010003426) #10	GJA9 (ENSLCAG00010003430) #11	ENSLCAG00010003436 #12	rragca (ENSLCAG00010003445) #13	pou3f1 (ENSLCAG00010003450) #14	utp11 (ENSLCAG00010003455) #15	FHL3 (ENSLCAG00010003463) #16	rspo1 (ENSLCAG00010003470) #17	gnl2 (ENSLCAG00010003490) #18	dnali1 (ENSLCAG00010003510) #19	snip1 (ENSLCAG00010003515)	ENSLCAG00010003538 #21	MAP7D1 (ENSLCAG00010003586) #22	THRAP3 (ENSLCAG00010003595) #23	sh3d21 (ENSLCAG00010003598) #24	eva1ba (ENSLCAG00010003602) #25	STK40 (ENSLCAG00010003605) #26	OSCP1 (ENSLCAG00010003615) #27	ENSLCAG00010003627 #28	mrps15 (ENSLCAG00010003634) #29	CSF3R (ENSLCAG00010003642) #30
Seriola	ANCESTRAL SPECIES	48	ENSGT00530000063881.a.b #7	ENSGT01060000248564.a.b #8	ENSGT00940000158787 #9	ENSGT00940000159442 #10	ENSGT01090000260070.C.a #11	ENSGT00390000017974.nb #12	ENSGT00950000183031.A.a.a #13	ENSGT00940000165372 #14	ENSGT00390000005813 #15	ENSGT00950000183028.a.b.a #16	ENSGT00940000158871 #17	ENSGT00810000125524 #18	ENSGT00390000003012 #19	ENSGT00940000156553 #20	ENSGT00940000159398 #21	ENSGT00950000182941.a.a.b.e.a.b #22	ENSGT00950000183163.a.a.ab #23	ENSGT00940000160627 #24	ENSGT00940000154096.b.b.b.b.b #25	ENSGT00950000182986.b #26	ENSGT00390000004808.e #27	ENSGT00940000166129 #28	ENSGT00390000001737 #29	ENSGT00940000158915 #30	ENSGT00940000159465 #31	ENSGT00940000155107.a.a.a #32	ENSGT00990000203803 #34	ENSGT00940000156762 #35	ENSGT00940000157291 #36	ENSGT00390000015364.b #37	ENSGT00390000016054.b.i
Greater amberjack	MODERN SPECIES	154	pnrc2 (ENSSDUG00000010643) #7	cnr2 (ENSSDUG00000010638) #8	akirin1 (ENSSDUG00000010616) #9	rhbdl2 (ENSSDUG00000010587) #10	GJA9 (ENSSDUG00000010578) #11	ENSSDUG00000010570 #12	rragca (ENSSDUG00000010543) #13	pou3f1 (ENSSDUG00000010532) #14	utp11 (ENSSDUG00000010501) #15	FHL3 (ENSSDUG00000010483) #16	rspo1 (ENSSDUG00000010472) #17	gnl2 (ENSSDUG00000010382) #18	dnali1 (ENSSDUG00000010345) #19	SNIP1 (ENSSDUG00000010325) #20	MAP3K6 (ENSSDUG00000010287) #21	MAP7D1 (ENSSDUG00000010208) #22	THRAP3 (ENSSDUG00000010132) #23	sh3d21 (ENSSDUG00000010098) #24	eva1ba (ENSSDUG00000010078) #25	STK40 (ENSSDUG00000010024) #26	OSCP1 (ENSSDUG00000009984) #27	ENSSDUG00000009969 #28	mrps15 (ENSSDUG00000009946) #29	csf3r (ENSSDUG00000009924) #30	GRIK3 (ENSSDUG00000009891) #31	ZC3H12A (ENSSDUG00000009879) #32	ENSSDUG00000009859 #34	INPP5B (ENSSDUG00000009812) #35	mtf1 (ENSSDUG00000009784) #36	yrdc (ENSSDUG00000009775) #37	MANEAL (ENSSDUG00000009753)
Pleuronectoidei	ANCESTRAL SPECIES	3	ENSGT00940000154450.uc	ENSGT00530000063881.a.b #7	ENSGT01060000248564.a.b #8	ENSGT00940000158787 #9	ENSGT00940000159442 #10	ENSGT01090000260070.C.a #11	ENSGT00390000017974.nb #12	ENSGT00940000165372 #14	ENSGT00390000005813 #15	ENSGT00950000183028.a.b.a #16	ENSGT00940000158871 #17	ENSGT00810000125524 #18	ENSGT00390000003012 #19	ENSGT00940000156553 #20	ENSGT00940000159398 #21	ENSGT00950000182941.a.a.b.e.a.b #22	ENSGT00950000183163.a.a.ab #23	ENSGT00940000160627 #24	ENSGT00940000154096.b.b.b.b.b #25	ENSGT00950000182986.b #26	ENSGT00390000004808.e #27	ENSGT01030000235168	ENSGT00390000001737 #29	ENSGT00940000158915 #30	ENSGT00940000159465 #31	ENSGT00940000155107.a.a.a #32	ENSGT00940000178211	ENSGT00940000156762 #35	ENSGT00940000157291 #36	ENSGT00390000015364.b #37	ENSGT00390000016054.b.i
Tongue sole	MODERN SPECIES	4	pnrc2 (ENSCSEG00000020261) #7	cnr2 (ENSCSEG00000020263) #8	akirin1 (ENSCSEG00000020264) #9	rhbdl2 (ENSCSEG00000020266) #10	GJA9 (ENSCSEG00000020269) #11	ENSCSEG00000020270	rragca (ENSCSEG00000020277) #13	pou3f1 (ENSCSEG00000020279) #14	utp11 (ENSCSEG00000020281) #15	FHL3 (ENSCSEG00000020285) #16	rspo1 (ENSCSEG00000020287) #17	gnl2 (ENSCSEG00000020296) #18	dnali1 (ENSCSEG00000020307) #19	snip1 (ENSCSEG00000020310)	ENSCSEG00000020313 #21	MAP7D1 (ENSCSEG00000020319) #22	ENSCSEG00000020325 #23	sh3d21 (ENSCSEG00000020331) #24	ENSCSEG00000020336	ENSCSEG00000020343	selenbp1 (ENSCSEG00000020362)	pogzb (ENSCSEG00000020370)	ENSCSEG00000020374	plekho1b (ENSCSEG00000020399)	ENSCSEG00000020402	ENSCSEG00000020409	ENSCSEG00000020416	ENSCSEG00000020420	iqgap3 (ENSCSEG00000020426)	ANKRD34A (ENSCSEG00000020436)	gon4lb (ENSCSEG00000020441)
Turbot	MODERN SPECIES		cnr2 (ENSSMAG00000003186) #8	akirin1 (ENSSMAG00000003202) #9	rhbdl2 (ENSSMAG00000003252) #10	GJA9 (ENSSMAG00000003266) #11	ENSSMAG00000003287 #12	rragca (ENSSMAG00000003327) #13	pou3f1 (ENSSMAG00000003341) #14	ENSSMAG00000035984	utp11 (ENSSMAG00000003346) #15	FHL3 (ENSSMAG00000027104) #16	rspo1 (ENSSMAG00000003444) #17	gnl2 (ENSSMAG00000003472) #18	dnali1 (ENSSMAG00000003563) #19	SNIP1 (ENSSMAG00000003570) #20	ENSSMAG00000003583 #21	MAP7D1 (ENSSMAG00000003648) #22	THRAP3 (ENSSMAG00000003703) #23	sh3d21 (ENSSMAG00000003747) #24	eva1ba (ENSSMAG00000023907) #25	STK40 (ENSSMAG00000003802) #26	OSCP1 (ENSSMAG00000003827) #27	ENSSMAG00000003843	mrps15 (ENSSMAG00000003899) #29	csf3r (ENSSMAG00000003925) #30	GRIK3 (ENSSMAG00000005100) #31	ZC3H12A (ENSSMAG00000005140) #32	INPP5B (ENSSMAG00000005147) #35	mtf1 (ENSSMAG00000005172) #36	yrdc (ENSSMAG00000005195) #37	MANEAL (ENSSMAG00000005209)	ENSSMAG00000005221
Eupercaria	ANCESTRAL SPECIES	1	ENSGT01060000248564.a.b #8	ENSGT00940000158787 #9	ENSGT00940000159442 #10	ENSGT01030000235133	ENSGT01090000260070.C.a #11	ENSGT00390000017974.nb #12	ENSGT00950000183031.A.a.a #13	ENSGT00940000165372 #14	ENSGT00390000005813 #15	ENSGT00950000183028.a.b.a #16	ENSGT00940000158871 #17	ENSGT00810000125524 #18	ENSGT00390000003012 #19	ENSGT00940000156553 #20	ENSGT00940000159398 #21	ENSGT00950000182941.a.a.b.e.a.b #22	ENSGT00950000183163.a.a.ab #23	ENSGT00940000160627 #24	ENSGT00940000154096.b.b.b.b.b #25	ENSGT00950000182986.b #26	ENSGT00390000004808.e #27	ENSGT00940000166129 #28	ENSGT00390000001737 #29	ENSGT00940000158915 #30	ENSGT00530000068429	ENSGT00940000159465 #31	ENSGT00940000155107.a.a.a #32	ENSGT00990000204035 #33	ENSGT00940000156762 #35	ENSGT00940000157291 #36	ENSGT00390000015364.b #37
Tetraodontidae	ANCESTRAL SPECIES	49	ENSGT00940000164147.a	ENSGT00530000063881.a.b #7	ENSGT01060000248564.a.b #8	ENSGT00940000158787 #9	ENSGT00940000159442 #10	ENSGT01090000260070.C.a #11	ENSGT00390000017974.nb #12	ENSGT00950000183031.A.a.a #13	ENSGT00940000165372 #14	ENSGT00390000005813 #15	ENSGT00950000183028.a.b.a #16	ENSGT00940000158871 #17	ENSGT00810000125524 #18	ENSGT00390000003012.x.a #19	ENSGT00940000159398 #21	ENSGT00950000182941.a.a.b.e.a.b #22	ENSGT00950000183163.a.a.ab #23	ENSGT00940000160627 #24	ENSGT00940000154096.b.b.b.b.b #25	ENSGT00950000182986.b #26	ENSGT00390000004808.e #27	ENSGT00940000166129 #28	ENSGT00390000001737 #29	ENSGT00940000158915 #30	ENSGT00940000159465 #31
Fugu	MODERN SPECIES	19	fabp10a (ENSTRUG00000019589)	pnrc2 (ENSTRUG00000022856) #7	cnr2 (ENSTRUG00000008915) #8	akirin1 (ENSTRUG00000024601) #9	rhbdl2 (ENSTRUG00000009100) #10	GJA9 (ENSTRUG00000033096) #11	ENSTRUG00000020122 #12	rragca (ENSTRUG00000009237) #13	pou3f1 (ENSTRUG00000009356) #14	utp11 (ENSTRUG00000009375) #15	FHL3 (ENSTRUG00000009493) #16	rspo1 (ENSTRUG00000009686) #17	gnl2 (ENSTRUG00000009789) #18	dnali1 (ENSTRUG00000010122) #19	ENSTRUG00000010218 #21	MAP7D1 (ENSTRUG00000010556) #22	THRAP3 (ENSTRUG00000010702) #23	sh3d21 (ENSTRUG00000010927) #24	eva1ba (ENSTRUG00000010950) #25	STK40 (ENSTRUG00000010973) #26	OSCP1 (ENSTRUG00000011056) #27	ENSTRUG00000021423 #28	mrps15 (ENSTRUG00000011129) #29	CSF3R (ENSTRUG00000011157) #30	GRIK3 (ENSTRUG00000011437) #31	ENSTRUG00000027138	pbx2 (ENSTRUG00000011925)	dnase2 (ENSTRUG00000012127)	rgl2 (ENSTRUG00000012178)	ENSTRUG00000021243	SYNGAP1 (ENSTRUG00000012329)
Tetraodon	MODERN SPECIES	26	ENSTNIG00000014963	rad51c (ENSTNIG00000014964)	ENSTNIG00000014965	ENSTNIG00000002273	XPO1 (ENSTNIG00000003360)	cct4 (ENSTNIG00000003361)	pus10 (ENSTNIG00000003362)	ENSTNIG00000005303	ENSTNIG00000000317	ENSTNIG00000005304	ENSTNIG00000005305	ENSTNIG00000003614	abcd1 (ENSTNIG00000006189)	gnl2 (ENSTNIG00000003733) #18	dnali1 (ENSTNIG00000003732) #19	ENSTNIG00000012195 #22	THRAP3 (ENSTNIG00000012194) #23	sh3d21 (ENSTNIG00000012193) #24	STK40 (ENSTNIG00000012192) #26	OSCP1 (ENSTNIG00000012191) #27	mrps15 (ENSTNIG00000012190) #29	CSF3R (ENSTNIG00000001409) #30	GRIK3 (ENSTNIG00000012189) #31	PIEZO1 (ENSTNIG00000003588)	ENSTNIG00000003589	ENSTNIG00000003590	ENSTNIG00000003591	ENSTNIG00000003592	tm9sf2 (ENSTNIG00000003593)	SYNGAP1 (ENSTNIG00000010304)	smg5 (ENSTNIG00000010303)
Eupecaria_A	ANCESTRAL SPECIES	2	ENSGT01060000248564.a.b #8	ENSGT00940000158787 #9	ENSGT00940000159442 #10	ENSGT01030000235133	ENSGT01090000260070.C.a #11	ENSGT00390000017974.nb #12	ENSGT00950000183031.A.a.a #13	ENSGT00940000165372 #14	ENSGT00390000005813 #15	ENSGT00950000183028.a.b.a #16	ENSGT00940000158871 #17	ENSGT00810000125524 #18	ENSGT00390000003012 #19	ENSGT00940000156553 #20	ENSGT00940000159398 #21	ENSGT00950000182941.a.a.b.e.a.b #22	ENSGT00950000183163.a.a.ab #23	ENSGT00940000160627 #24	ENSGT00940000154096.b.b.b.b.b #25	ENSGT00950000182986.b #26	ENSGT00390000004808.e #27	ENSGT00940000166129 #28	ENSGT00390000001737 #29	ENSGT00940000158915 #30	ENSGT00530000068429	ENSGT00940000159465 #31	ENSGT00940000155107.a.a.a #32	ENSGT00990000204035 #33	ENSGT00940000156762 #35	ENSGT00940000157291 #36	ENSGT00390000015364.b #37
Ballan wrasse	MODERN SPECIES	58	akirin1 (ENSLBEG00000008199) #9	rhbdl2 (ENSLBEG00000008248) #10	ENSLBEG00000008283	GJA9 (ENSLBEG00000008301) #11	ENSLBEG00000008336	rragca (ENSLBEG00000008360) #13	pou3f1 (ENSLBEG00000008388) #14	utp11 (ENSLBEG00000008407) #15	FHL3 (ENSLBEG00000008447) #16	rspo1 (ENSLBEG00000008477) #17	gnl2 (ENSLBEG00000008518) #18	dnali1 (ENSLBEG00000008589) #19	ENSLBEG00000008632	ENSLBEG00000008644 #21	ENSLBEG00000008678 #21	MAP7D1 (ENSLBEG00000008723) #22	THRAP3 (ENSLBEG00000008813) #23	sh3d21 (ENSLBEG00000008879) #24	eva1ba (ENSLBEG00000008911) #25	ENSLBEG00000008935	STK40 (ENSLBEG00000008958) #26	OSCP1 (ENSLBEG00000009007) #27	ENSLBEG00000009056 #28	mrps15 (ENSLBEG00000009087) #29	CSF3R (ENSLBEG00000009161) #30	GRIK3 (ENSLBEG00000009256) #31
Eupecaria_B	ANCESTRAL SPECIES	4	ENSGT00530000063881.a.b #7	ENSGT01060000248564.a.b #8	ENSGT00940000158787 #9	ENSGT00940000159442 #10	ENSGT01090000260070.C.a #11	ENSGT00390000017974.nb #12	ENSGT00950000183031.A.a.a #13	ENSGT00940000165372 #14	ENSGT00390000005813 #15	ENSGT00950000183028.a.b.a #16	ENSGT00940000158871 #17	ENSGT00810000125524 #18	ENSGT00390000003012 #19	ENSGT00940000156553 #20	ENSGT00940000159398 #21	ENSGT00950000182941.a.a.b.e.a.b #22	ENSGT00950000183163.a.a.ab #23	ENSGT00940000160627 #24	ENSGT00940000154096.b.b.b.b.b #25	ENSGT00950000182986.b #26	ENSGT00390000004808.e #27	ENSGT00940000166129 #28	ENSGT00390000001737 #29	ENSGT00940000158915 #30	ENSGT00530000068429	ENSGT00940000159465 #31	ENSGT00940000155107.a.a.a #32	ENSGT00990000204035 #33	ENSGT00940000156762 #35	ENSGT00940000157291 #36	ENSGT00390000015364.b #37
Eupecaria_C	ANCESTRAL SPECIES	2	ENSGT00940000154450.uc	ENSGT00530000063881.a.b #7	ENSGT01060000248564.a.b #8	ENSGT00940000158787 #9	ENSGT00940000159442 #10	ENSGT01090000260070.C.a #11	ENSGT00390000017974.nb #12	ENSGT00950000183031.A.a.a #13	ENSGT00940000165372 #14	ENSGT00390000005813 #15	ENSGT00950000183028.a.b.a #16	ENSGT00940000158871 #17	ENSGT00810000125524 #18	ENSGT00390000003012 #19	ENSGT00940000159398 #21	ENSGT00950000182941.a.a.b.e.a.b #22	ENSGT00950000183163.a.a.ab #23	ENSGT00940000160627 #24	ENSGT00940000154096.b.b.b.b.b #25	ENSGT00950000182986.b #26	ENSGT00390000004808.e #27	ENSGT00940000166129 #28	ENSGT00390000001737 #29	ENSGT00940000158915 #30	ENSGT00940000159465 #31	ENSGT00940000155107.a.a.a #32	ENSGT00990000204035 #33	ENSGT00940000156762 #35	ENSGT00940000157291 #36	ENSGT00390000015364.b #37	ENSGT00390000016054.b.i
Gilthead seabream	MODERN SPECIES	8	pnrc2 (ENSSAUG00010015052) #7	cnr2 (ENSSAUG00010015051) #8	akirin1 (ENSSAUG00010015045) #9	rhbdl2 (ENSSAUG00010015042) #10	GJA9 (ENSSAUG00010015040) #11	ENSSAUG00010015039 #12	rragca (ENSSAUG00010015034) #13	pou3f1 (ENSSAUG00010015032) #14	utp11 (ENSSAUG00010015030) #15	FHL3 (ENSSAUG00010015024) #16	rspo1 (ENSSAUG00010015022) #17	gnl2 (ENSSAUG00010015013) #18	dnali1 (ENSSAUG00010015007) #19	snip1 (ENSSAUG00010015005)	MAP3K6 (ENSSAUG00010020734) #21	MAP7D1 (ENSSAUG00010020726) #22	THRAP3 (ENSSAUG00010020723) #23	sh3d21 (ENSSAUG00010020721) #24	eva1ba (ENSSAUG00010020720) #25	STK40 (ENSSAUG00010020718) #26	OSCP1 (ENSSAUG00010020717) #27	ENSSAUG00010020716 #28	mrps15 (ENSSAUG00010020715) #29	csf3r (ENSSAUG00010020713) #30	GRIK3 (ENSSAUG00010017988) #31	ZC3H12A (ENSSAUG00010017948) #32	ENSSAUG00010017943 #33	INPP5B (ENSSAUG00010017637) #35	mtf1 (ENSSAUG00010017599) #36	yrdc (ENSSAUG00010017597) #37	MANEAL (ENSSAUG00010017595)
Eupercaria_incertae_sedis	ANCESTRAL SPECIES	2	ENSGT00940000164147.a	ENSGT00940000154450.uc	ENSGT00530000063881.a.b #7	ENSGT01060000248564.a.b #8	ENSGT00940000158787 #9	ENSGT00940000159442 #10	ENSGT01090000260070.C.a #11	ENSGT00390000017974.nb #12	ENSGT00940000165372 #14	ENSGT00390000005813 #15	ENSGT00950000183028.a.b.a #16	ENSGT00940000158871 #17	ENSGT00810000125524 #18	ENSGT00390000003012 #19	ENSGT00940000159398 #21	ENSGT00950000182941.a.a.b.e.a.b #22	ENSGT00950000183163.a.a.ab #23	ENSGT00940000160627 #24	ENSGT00940000154096.b.b.b.b.b #25	ENSGT00950000182986.b #26	ENSGT00390000004808.e #27	ENSGT00390000001737 #29	ENSGT00940000158915 #30	ENSGT00940000159465 #31	ENSGT00940000155107.a.a.a #32	ENSGT00990000204035 #33	ENSGT00940000156762 #35	ENSGT00940000157291 #36	ENSGT00390000015364.b #37	ENSGT00390000016054.b.i	ENSGT00940000153295.a.a
European seabass	MODERN SPECIES	6	pnrc2 (ENSDLAG00005027869) #7	ENSDLAG00005007393	SRSF10 (ENSDLAG00005029184)	cnr2 (ENSDLAG00005033223) #8	rhbdl2 (ENSDLAG00005007466) #10	GJA9 (ENSDLAG00005007475) #11	ENSDLAG00005029266 #12	rragca (ENSDLAG00005007481) #13	pou3f1 (ENSDLAG00005029296) #14	utp11 (ENSDLAG00005007490) #15	FHL3 (ENSDLAG00005007500) #16	rspo1 (ENSDLAG00005007510) #17	gnl2 (ENSDLAG00005007540) #18	dnali1 (ENSDLAG00005034656) #19	ENSDLAG00005008475 #21	MAP7D1 (ENSDLAG00005009499) #22	THRAP3 (ENSDLAG00005009555) #23	sh3d21 (ENSDLAG00005009583) #24	eva1ba (ENSDLAG00005029823) #25	STK40 (ENSDLAG00005009633) #26	OSCP1 (ENSDLAG00005009654) #27	mrps15 (ENSDLAG00005030986) #29	csf3r (ENSDLAG00005009735) #30	GRIK3 (ENSDLAG00005009845) #31	ZC3H12A (ENSDLAG00005011869) #32	ENSDLAG00005032500 #33	INPP5B (ENSDLAG00005011892) #35	mtf1 (ENSDLAG00005012917) #36	MANEAL (ENSDLAG00005027752)	yrdc (ENSDLAG00005013053) #37	ENSDLAG00005034052
Large yellow croaker	MODERN SPECIES	484	scn1ba (ENSLCRG00005010222)	ENSLCRG00005010153	si:ch211-225p5.8 (ENSLCRG00005010109)	KCNE1 (ENSLCRG00005010097)	dnajc28 (ENSLCRG00005010096)	ENSLCRG00005010093	rragca (ENSLCRG00005010089) #13	pou3f1 (ENSLCRG00005010081) #14	utp11 (ENSLCRG00005010070) #15	FHL3 (ENSLCRG00005010057) #16	rspo1 (ENSLCRG00005010051) #17	gnl2 (ENSLCRG00005010011) #18	dnali1 (ENSLCRG00005009982) #19	snip1 (ENSLCRG00005009965)	ENSLCRG00005006336 #21	MAP7D1 (ENSLCRG00005005931) #22	THRAP3 (ENSLCRG00005005916) #23	sh3d21 (ENSLCRG00005005906) #24	eva1ba (ENSLCRG00005005900) #25	STK40 (ENSLCRG00005005869) #26	OSCP1 (ENSLCRG00005005741) #27	ENSLCRG00005005712	mrps15 (ENSLCRG00005005702) #29	csf3r (ENSLCRG00005005672) #30	GRIK3 (ENSLCRG00005005377) #31	ZC3H12A (ENSLCRG00005005327) #32	ENSLCRG00005005318 #33	INPP5B (ENSLCRG00005003620) #35	mtf1 (ENSLCRG00005003083) #36	yrdc (ENSLCRG00005002976) #37	MANEAL (ENSLCRG00005012059)
Perciformes	ANCESTRAL SPECIES	3	ENSGT00530000063881.a.b #7	ENSGT01060000248564.a.b #8	ENSGT00940000158787 #9	ENSGT00940000159442 #10	ENSGT01090000260070.C.a #11	ENSGT00390000017974.nb #12	ENSGT00950000183031.A.a.a #13	ENSGT00940000165372 #14	ENSGT00390000005813 #15	ENSGT00950000183028.a.b.a #16	ENSGT00940000158871 #17	ENSGT00810000125524 #18	ENSGT00390000003012 #19	ENSGT00940000156553 #20	ENSGT00940000159398 #21	ENSGT00950000182941.a.a.b.e.a.b #22	ENSGT00950000183163.a.a.ab #23	ENSGT00940000160627 #24	ENSGT00940000154096.b.b.b.b.b #25	ENSGT00950000182986.b #26	ENSGT00390000004808.e #27	ENSGT00940000166129 #28	ENSGT00390000001737 #29	ENSGT00940000158915 #30	ENSGT00530000068429	ENSGT00940000159465 #31	ENSGT00940000155107.a.a.a #32	ENSGT00990000204035 #33	ENSGT00940000156762 #35	ENSGT00940000157291 #36	ENSGT00390000015364.b #37
Perciformes_a	ANCESTRAL SPECIES	3	ENSGT00940000154450.uc	ENSGT00530000063881.a.b #7	ENSGT01060000248564.a.b #8	ENSGT00940000158787 #9	ENSGT00940000159442 #10	ENSGT01090000260070.C.a #11	ENSGT00390000017974.nb #12	ENSGT00940000165372 #14	ENSGT00390000005813 #15	ENSGT00950000183028.a.b.a #16	ENSGT00940000158871 #17	ENSGT00810000125524 #18	ENSGT00390000003012 #19	ENSGT00940000156553 #20	ENSGT00940000159398 #21	ENSGT00950000182941.a.a.b.e.a.b #22	ENSGT00950000183163.a.a.ab #23	ENSGT00940000160627 #24	ENSGT00940000154096.b.b.b.b.b #25	ENSGT00950000182986.b #26	ENSGT00390000004808.e #27	ENSGT00940000166129 #28	ENSGT00390000001737 #29	ENSGT00940000158915 #30	ENSGT00940000159465 #31	ENSGT00940000155107.a.a.a #32	ENSGT00940000156762 #35	ENSGT00940000157291 #36	ENSGT00390000015364.b #37	ENSGT00390000016054.b.i	ENSGT00940000153295.a.a
Pike perch	MODERN SPECIES	116													dnali1 (ENSSLUG00000005235) #19	snip1 (ENSSLUG00000005225)	MAP3K6 (ENSSLUG00000003332) #21	MAP7D1 (ENSSLUG00000002922) #22	THRAP3 (ENSSLUG00000002906) #23	sh3d21 (ENSSLUG00000002896) #24	eva1ba (ENSSLUG00000002889) #25	STK40 (ENSSLUG00000002877) #26	OSCP1 (ENSSLUG00000002865) #27	ENSSLUG00000002857 #28	mrps15 (ENSSLUG00000023350) #29	csf3r (ENSSLUG00000023341) #30	GRIK3 (ENSSLUG00000023219) #31	ENSSLUG00000023196	ZC3H12A (ENSSLUG00000023191) #32	ENSSLUG00000023188	INPP5B (ENSSLUG00000021701) #35	mtf1 (ENSSLUG00000021588) #36	yrdc (ENSSLUG00000021583) #37
Cottioidei	ANCESTRAL SPECIES	7	ENSGT00940000154450.uc	ENSGT00530000063881.a.b #7	ENSGT01060000248564.a.b #8	ENSGT00940000158787 #9	ENSGT00940000159442 #10	ENSGT01090000260070.C.a #11	ENSGT00390000017974.nb #12	ENSGT00950000183031.A.a.a #13	ENSGT00940000165372 #14	ENSGT00390000005813 #15	ENSGT00950000183028.a.b.a #16	ENSGT00940000158871 #17	ENSGT00810000125524 #18	ENSGT00390000003012 #19	ENSGT00940000159398 #21	ENSGT00950000182941.a.a.b.e.a.b #22	ENSGT00950000183163.a.a.ab #23	ENSGT00940000160627 #24	ENSGT00940000154096.b.b.b.b.b #25	ENSGT00950000182986.b #26	ENSGT00390000004808.e #27	ENSGT00940000166129 #28	ENSGT00390000001737 #29	ENSGT00940000158915 #30	ENSGT00530000068429	ENSGT00940000159465 #31	ENSGT00940000155107.a.a.a #32	ENSGT00990000204035 #33	ENSGT00940000156762 #35	ENSGT00940000157291 #36	ENSGT00390000015364.b #37
Stickleback	DUPLICATION
Stickleback	MODERN SPECIES	19	pnrc2 (ENSGACG00000013653) #7	cnr2 (ENSGACG00000013656) #8	akirin1 (ENSGACG00000013657) #9	rhbdl2 (ENSGACG00000013668) #10	GJA9 (ENSGACG00000013675) #11	ENSGACG00000013676 #12	rragca (ENSGACG00000013678) #13	pou3f1 (ENSGACG00000013679) #14	utp11 (ENSGACG00000013680) #15	FHL3 (ENSGACG00000013685) #16	rspo1 (ENSGACG00000013691) #17	gnl2 (ENSGACG00000013692) #18	dnali1 (ENSGACG00000013717) #19	snip1 (ENSGACG00000013718)	MAP3K6 (ENSGACG00000013722) #21	ENSGACG00000013737 #22	ENSGACG00000013740 #22	THRAP3 (ENSGACG00000013745) #23	sh3d21 (ENSGACG00000013749) #24	eva1ba (ENSGACG00000013751) #25	STK40 (ENSGACG00000013752) #26	OSCP1 (ENSGACG00000013774) #27	mrps15 (ENSGACG00000013792) #29	csf3r (ENSGACG00000013795) #30	ENSGACG00000013798	GRIK3 (ENSGACG00000013802) #31	ZC3H12A (ENSGACG00000013859) #32	ENSGACG00000013863 #33	INPP5B (ENSGACG00000013866) #35	mtf1 (ENSGACG00000013875) #36	yrdc (ENSGACG00000013878) #37
Stickleback	MODERN SPECIES	19	cnr2 (ENSGACG00000013656) #8	akirin1 (ENSGACG00000013657) #9	rhbdl2 (ENSGACG00000013668) #10	GJA9 (ENSGACG00000013675) #11	ENSGACG00000013676 #12	rragca (ENSGACG00000013678) #13	pou3f1 (ENSGACG00000013679) #14	utp11 (ENSGACG00000013680) #15	FHL3 (ENSGACG00000013685) #16	rspo1 (ENSGACG00000013691) #17	gnl2 (ENSGACG00000013692) #18	dnali1 (ENSGACG00000013717) #19	snip1 (ENSGACG00000013718)	MAP3K6 (ENSGACG00000013722) #21	ENSGACG00000013737 #22	ENSGACG00000013740 #22	THRAP3 (ENSGACG00000013745) #23	sh3d21 (ENSGACG00000013749) #24	eva1ba (ENSGACG00000013751) #25	STK40 (ENSGACG00000013752) #26	OSCP1 (ENSGACG00000013774) #27	mrps15 (ENSGACG00000013792) #29	csf3r (ENSGACG00000013795) #30	ENSGACG00000013798	GRIK3 (ENSGACG00000013802) #31	ZC3H12A (ENSGACG00000013859) #32	ENSGACG00000013863 #33	INPP5B (ENSGACG00000013866) #35	mtf1 (ENSGACG00000013875) #36	yrdc (ENSGACG00000013878) #37	ENSGACG00000013885
Lumpfish	MODERN SPECIES	7	pnrc2 (ENSCLMG00005009430) #7	cnr2 (ENSCLMG00005009429) #8	akirin1 (ENSCLMG00005009427) #9	rhbdl2 (ENSCLMG00005009374) #10	GJA9 (ENSCLMG00005009373) #11	ENSCLMG00005009372 #12	rragca (ENSCLMG00005009371) #13	pou3f1 (ENSCLMG00005009370) #14	utp11 (ENSCLMG00005009369) #15	FHL3 (ENSCLMG00005009368) #16	rspo1 (ENSCLMG00005009363) #17	gnl2 (ENSCLMG00005009359) #18	dnali1 (ENSCLMG00005009357) #19	snip1 (ENSCLMG00005009356)	MAP3K6 (ENSCLMG00005009166) #21	MAP7D1 (ENSCLMG00005009165) #22	THRAP3 (ENSCLMG00005009163) #23	sh3d21 (ENSCLMG00005009162) #24	eva1ba (ENSCLMG00005009161) #25	STK40 (ENSCLMG00005009160) #26	OSCP1 (ENSCLMG00005009149) #27	ENSCLMG00005009147 #28	mrps15 (ENSCLMG00005009146) #29	csf3r (ENSCLMG00005009144) #30	GRIK3 (ENSCLMG00005008787) #31	ZC3H12A (ENSCLMG00005008781) #32	INPP5B (ENSCLMG00005007032) #35	mtf1 (ENSCLMG00005007022) #36	yrdc (ENSCLMG00005007021) #37	MANEAL (ENSCLMG00005007019)	LIN28A (ENSCLMG00005007018)
Ovalentaria	ANCESTRAL SPECIES	3	ENSGT00530000063881.a.b #7	ENSGT01060000248564.a.b #8	ENSGT00940000158787 #9	ENSGT00940000159442 #10	ENSGT01090000260070.C.a #11	ENSGT00390000017974.nb #12	ENSGT00950000183031.A.a.a #13	ENSGT00940000165372 #14	ENSGT00390000005813 #15	ENSGT00950000183028.a.b.a #16	ENSGT00940000158871 #17	ENSGT00810000125524 #18	ENSGT00390000003012 #19	ENSGT00940000156553 #20	ENSGT00940000159398 #21	ENSGT00950000182941.a.a.b.e.a.b #22	ENSGT00950000183163.a.a.ab #23	ENSGT00940000160627 #24	ENSGT00940000154096.b.b.b.b.b #25	ENSGT00950000182986.b #26	ENSGT00390000004808.e #27	ENSGT00940000166129 #28	ENSGT00390000001737 #29	ENSGT00940000158915 #30	ENSGT00530000068429	ENSGT00940000159465 #31	ENSGT00940000155107.a.a.a #32	ENSGT00990000204035 #33	ENSGT00600000085609	ENSGT00990000203803 #34	ENSGT00940000156762 #35
Ovalentaria_B	ANCESTRAL SPECIES	1	ENSGT00530000063881.a.b #7	ENSGT01060000248564.a.b #8	ENSGT00940000158787 #9	ENSGT00940000159442 #10	ENSGT01090000260070.C.a #11	ENSGT00390000017974.nb #12	ENSGT00950000183031.A.a.a #13	ENSGT00940000165372 #14	ENSGT00390000005813 #15	ENSGT00950000183028.a.b.a #16	ENSGT00940000158871 #17	ENSGT00810000125524 #18	ENSGT00390000003012 #19	ENSGT00940000156553 #20	ENSGT00940000159398 #21	ENSGT00950000182941.a.a.b.e.a.b #22	ENSGT00950000183163.a.a.ab #23	ENSGT00940000160627 #24	ENSGT00940000154096.b.b.b.b.b #25	ENSGT00950000182986.b #26	ENSGT00390000004808.e #27	ENSGT00940000166129 #28	ENSGT00390000001737 #29	ENSGT00940000158915 #30	ENSGT00940000159465 #31	ENSGT00940000155107.a.a.a #32	ENSGT00990000204035 #33	ENSGT00600000085609	ENSGT00990000203803 #34	ENSGT00940000156762 #35	ENSGT00940000157291 #36
Pomacentridae	ANCESTRAL SPECIES	35	ENSGT00530000063881.a.b #7	ENSGT01060000248564.a.b #8	ENSGT00940000158787 #9	ENSGT00940000159442 #10	ENSGT01090000260070.C.a #11	ENSGT00390000017974.nb #12	ENSGT00950000183031.A.a.a #13	ENSGT00940000165372 #14	ENSGT00390000005813 #15	ENSGT00950000183028.a.b.a #16	ENSGT00940000158871 #17	ENSGT00810000125524 #18	ENSGT00390000003012 #19	ENSGT00940000156553.f #20	ENSGT00940000159398 #21	ENSGT00950000182941.a.a.b.e.a.b #22	ENSGT00950000183163.a.a.ab #23	ENSGT00940000160627 #24	ENSGT00940000154096.b.b.b.b.b #25	ENSGT00950000182986.b #26	ENSGT00390000004808.e #27	ENSGT00940000166129 #28	ENSGT00390000001737 #29	ENSGT00940000158915 #30	ENSGT00940000159465 #31	ENSGT00940000155107.a.a.a #32	ENSGT00990000203803 #34	ENSGT00990000204035 #33	ENSGT00940000156762 #35	ENSGT00940000157291 #36	ENSGT00390000015364.b #37
Pomacentridae_A	ANCESTRAL SPECIES	16	ENSGT00530000063881.a.b #7	ENSGT01060000248564.a.b #8	ENSGT00940000158787 #9	ENSGT00940000159442 #10	ENSGT01090000260070.C.a #11	ENSGT00390000017974.nb #12	ENSGT00950000183031.A.a.a #13	ENSGT00940000165372 #14	ENSGT00390000005813 #15	ENSGT00950000183028.a.b.a #16	ENSGT00940000158871 #17	ENSGT00810000125524 #18	ENSGT00390000003012 #19	ENSGT00940000156553.f #20	ENSGT00940000159398 #21	ENSGT00950000182941.a.a.b.e.a.b #22	ENSGT00950000183163.a.a.ab #23	ENSGT00940000160627 #24	ENSGT00940000154096.b.b.b.b.b #25	ENSGT00950000182986.b #26	ENSGT00390000004808.e #27	ENSGT00940000166129 #28	ENSGT00390000001737 #29	ENSGT00940000158915 #30	ENSGT00940000159465 #31	ENSGT00940000155107.a.a.a #32	ENSGT00990000204035 #33	ENSGT00940000156762 #35	ENSGT00940000157291 #36	ENSGT00390000015364.b #37	ENSGT00390000016054.b.i
Amphiprion	ANCESTRAL SPECIES	1	ENSGT00530000063881.a.b #7	ENSGT01060000248564.a.b #8	ENSGT00940000158787 #9	ENSGT00940000159442 #10	ENSGT01090000260070.C.a #11	ENSGT00390000017974.nb #12	ENSGT00950000183031.A.a.a #13	ENSGT00940000165372 #14	ENSGT00390000005813 #15	ENSGT00950000183028.a.b.a #16	ENSGT00940000158871 #17	ENSGT00810000125524 #18	ENSGT00390000003012 #19	ENSGT00940000156553.f #20	ENSGT00940000159398 #21	ENSGT00950000182941.a.a.b.e.a.b #22	ENSGT00950000183163.a.a.ab #23	ENSGT00940000160627 #24	ENSGT00940000154096.b.b.b.b.b #25	ENSGT00950000182986.b #26	ENSGT00390000004808.e #27	ENSGT00940000166129 #28	ENSGT00390000001737 #29	ENSGT00940000158915 #30	ENSGT00940000159465 #31	ENSGT00940000155107.a.a.a #32	ENSGT00990000203803 #34	ENSGT00990000204035 #33	ENSGT00940000156762 #35	ENSGT00940000157291 #36	ENSGT00390000015364.b #37
Clown anemonefish	MODERN SPECIES	1296										FHL3 (ENSAOCG00000014316) #16	rspo1 (ENSAOCG00000014341) #17	gnl2 (ENSAOCG00000014396) #18	dnali1 (ENSAOCG00000014444) #19	SNIP1 (ENSAOCG00000014455) #20	MAP3K6 (ENSAOCG00000014625) #21	MAP7D1 (ENSAOCG00000014698) #22	THRAP3 (ENSAOCG00000014738) #23	sh3d21 (ENSAOCG00000000988) #24	eva1ba (ENSAOCG00000014770) #25	STK40 (ENSAOCG00000000999) #26	OSCP1 (ENSAOCG00000001002) #27	ENSAOCG00000001009 #28	mrps15 (ENSAOCG00000014871) #29	csf3r (ENSAOCG00000014880) #30	GRIK3 (ENSAOCG00000002707) #31	ZC3H12A (ENSAOCG00000014937) #32	ENSAOCG00000001847 #34	ENSAOCG00000014980	INPP5B (ENSAOCG00000014998) #35	mtf1 (ENSAOCG00000015058) #36
Orange clownfish	MODERN SPECIES	21	pnrc2 (ENSAPEG00000004927) #7	cnr2 (ENSAPEG00000004941) #8	akirin1 (ENSAPEG00000005009) #9	rhbdl2 (ENSAPEG00000005028) #10	GJA9 (ENSAPEG00000005061) #11	MYCBP (ENSAPEG00000005073) #12	rragca (ENSAPEG00000005106) #13	pou3f1 (ENSAPEG00000005174) #14	utp11 (ENSAPEG00000005214) #15	FHL3 (ENSAPEG00000005272) #16	rspo1 (ENSAPEG00000005307) #17	gnl2 (ENSAPEG00000005375) #18	dnali1 (ENSAPEG00000005453) #19	SNIP1 (ENSAPEG00000005542) #20	MAP3K6 (ENSAPEG00000005570) #21	MAP7D1 (ENSAPEG00000005614) #22	THRAP3 (ENSAPEG00000005696) #23	sh3d21 (ENSAPEG00000005738) #24	eva1ba (ENSAPEG00000005773) #25	STK40 (ENSAPEG00000005892) #26	OSCP1 (ENSAPEG00000005918) #27	ENSAPEG00000005981 #28	mrps15 (ENSAPEG00000005965) #29	csf3r (ENSAPEG00000005997) #30	GRIK3 (ENSAPEG00000006019) #31	ZC3H12A (ENSAPEG00000006072) #32	ENSAPEG00000006078 #33	INPP5B (ENSAPEG00000006094) #35	mtf1 (ENSAPEG00000006125) #36	yrdc (ENSAPEG00000006164) #37	MANEAL (ENSAPEG00000006178)
Spiny chromis	MODERN SPECIES		SRSF10 (ENSAPOG00000024544)	pnrc2 (ENSAPOG00000024543) #7	cnr2 (ENSAPOG00000024541) #8	akirin1 (ENSAPOG00000024540) #9	rhbdl2 (ENSAPOG00000024538) #10	MYCBP (ENSAPOG00000024534) #12	rragca (ENSAPOG00000024532) #13	pou3f1 (ENSAPOG00000024530) #14	utp11 (ENSAPOG00000024525) #15	FHL3 (ENSAPOG00000024520) #16	rspo1 (ENSAPOG00000024512) #17	gnl2 (ENSAPOG00000024507) #18	dnali1 (ENSAPOG00000024495) #19	SNIP1 (ENSAPOG00000024490) #20	MAP3K6 (ENSAPOG00000024486) #21	MAP7D1 (ENSAPOG00000024474) #22	THRAP3 (ENSAPOG00000024453) #23	sh3d21 (ENSAPOG00000024442) #24	eva1ba (ENSAPOG00000024432) #25	STK40 (ENSAPOG00000024423) #26	OSCP1 (ENSAPOG00000024408) #27	ENSAPOG00000024397	mrps15 (ENSAPOG00000024393) #29	csf3r (ENSAPOG00000024384) #30	GRIK3 (ENSAPOG00000024373) #31	ZC3H12A (ENSAPOG00000024328) #32	ENSAPOG00000024319 #33	INPP5B (ENSAPOG00000024312) #35	mtf1 (ENSAPOG00000024298) #36	yrdc (ENSAPOG00000024293) #37	MANEAL (ENSAPOG00000024286)
Bicolor damselfish	MODERN SPECIES	1002								pou3f1 (ENSSPAG00000017202) #14	utp11 (ENSSPAG00000017221) #15	FHL3 (ENSSPAG00000017252) #16	rspo1 (ENSSPAG00000017297) #17	gnl2 (ENSSPAG00000017473) #18	dnali1 (ENSSPAG00000017535) #19	SNIP1 (ENSSPAG00000017549) #20	MAP3K6 (ENSSPAG00000017562) #21	MAP7D1 (ENSSPAG00000017601) #22	ENSSPAG00000017651 #23	sh3d21 (ENSSPAG00000017676) #24	eva1ba (ENSSPAG00000017702) #25
Cichlidae	ANCESTRAL SPECIES	9	ENSGT00940000154450.uc	ENSGT00530000063881.a.b #7	ENSGT01060000248564.a.b #8	ENSGT00940000158787 #9	ENSGT00940000159442 #10	ENSGT00390000017974.nb #12	ENSGT00950000183031.A.a.a #13	ENSGT00940000165372 #14	ENSGT00390000005813 #15	ENSGT00950000183028.a.b.a #16	ENSGT00940000158871 #17	ENSGT00810000125524 #18	ENSGT00390000003012 #19	ENSGT00940000156553 #20	ENSGT00940000159398 #21	ENSGT00950000182941.a.a.b.e.a.b #22	ENSGT00950000183163.a.a.ab #23	ENSGT00940000160627 #24	ENSGT00940000154096.b.b.b.b.b #25	ENSGT00950000182986.b #26	ENSGT00390000004808.e #27	ENSGT00940000166129 #28	ENSGT00390000001737 #29	ENSGT00940000158915 #30	ENSGT00940000159465 #31	ENSGT00940000155107.a.a.a #32	ENSGT00990000204035 #33	ENSGT00600000085609	ENSGT00940000178211	ENSGT00940000156762 #35	ENSGT00940000157291 #36
Pseudocrenilabrinae	ANCESTRAL SPECIES	2	ENSGT00940000154450.uc	ENSGT00530000063881.a.b #7	ENSGT01060000248564.a.b #8	ENSGT00940000158787 #9	ENSGT00940000159442 #10	ENSGT00390000017974.nb #12	ENSGT00950000183031.A.a.a #13	ENSGT00940000165372 #14	ENSGT00390000005813 #15	ENSGT00950000183028.a.b.a #16	ENSGT00940000158871 #17	ENSGT00810000125524 #18	ENSGT00390000003012 #19	ENSGT00940000156553 #20	ENSGT00940000159398 #21	ENSGT00950000182941.a.a.b.e.a.b #22	ENSGT00950000183163.a.a.ab #23	ENSGT00940000160627 #24	ENSGT00940000154096.b.b.b.b.b #25	ENSGT00950000182986.b #26	ENSGT00390000004808.e #27	ENSGT00940000166129 #28	ENSGT00390000001737 #29	ENSGT00940000158915 #30	ENSGT00940000159465 #31	ENSGT00940000155107.a.a.a #32	ENSGT00990000204035 #33	ENSGT00600000085609	ENSGT00940000178211	ENSGT00940000156762 #35	ENSGT00940000157291 #36
Pseudocrenilabrinae_A	ANCESTRAL SPECIES	1	ENSGT00940000154450.uc	ENSGT00530000063881.a.b #7	ENSGT01060000248564.a.b #8	ENSGT00940000158787 #9	ENSGT00940000159442 #10	ENSGT00390000017974.nb #12	ENSGT00950000183031.A.a.a #13	ENSGT00940000165372 #14	ENSGT00390000005813 #15	ENSGT00950000183028.a.b.a #16	ENSGT00940000158871 #17	ENSGT00810000125524 #18	ENSGT00390000003012 #19	ENSGT00940000156553 #20	ENSGT00940000159398 #21	ENSGT00950000182941.a.a.b.e.a.b #22	ENSGT00950000183163.a.a.ab #23	ENSGT00940000160627 #24	ENSGT00940000154096.b.b.b.b.b #25	ENSGT00950000182986.b #26	ENSGT00390000004808.e #27	ENSGT00940000166129 #28	ENSGT00390000001737 #29	ENSGT00940000158915 #30	ENSGT00940000159465 #31	ENSGT00940000155107.a.a.a #32	ENSGT00990000204035 #33	ENSGT00940000156762 #35	ENSGT00940000157291 #36	ENSGT00390000015364.b #37	ENSGT00390000016054.b.i
Haplochromini	ANCESTRAL SPECIES	6	ENSGT00530000063881.a.b #7	ENSGT01060000248564.a.b #8	ENSGT00940000158787 #9	ENSGT00940000159442 #10	ENSGT00390000017974.nb #12	ENSGT00950000183031.A.a.a #13	ENSGT00940000165372 #14	ENSGT00390000005813 #15	ENSGT00950000183028.a.b.a #16	ENSGT00940000158871 #17	ENSGT00940000166920	ENSGT00810000125524 #18	ENSGT00390000003012 #19	ENSGT00940000156553 #20	ENSGT00940000159398 #21	ENSGT00950000182941.a.a.b.e.a.b #22	ENSGT00950000183163.a.a.ab #23	ENSGT00940000160627 #24	ENSGT00940000154096.b.b.b.b.b #25	ENSGT00950000182986.b #26	ENSGT00390000004808.e #27	ENSGT00940000166129 #28	ENSGT00390000001737 #29	ENSGT00940000158915 #30	ENSGT00940000159465 #31	ENSGT00940000155107.a.a.a #32	ENSGT00990000204035 #33	ENSGT00940000156762 #35	ENSGT00940000157291 #36	ENSGT00390000015364.b #37	ENSGT00390000016054.b.i
Haplochromini_A	ANCESTRAL SPECIES	18	ENSGT00530000063881.a.b #7	ENSGT01060000248564.a.b #8	ENSGT00940000158787 #9	ENSGT00940000159442 #10	ENSGT00390000017974.nb #12	ENSGT00950000183031.A.a.a #13	ENSGT00940000165372 #14	ENSGT00390000005813 #15	ENSGT00950000183028.a.b.a #16	ENSGT00940000158871 #17	ENSGT00940000166920	ENSGT00810000125524 #18	ENSGT00390000003012 #19	ENSGT00940000156553 #20	ENSGT00940000159398 #21	ENSGT00950000182941.a.a.b.e.a.b #22	ENSGT00950000183163.a.a.ab #23	ENSGT00940000160627 #24	ENSGT00940000154096.b.b.b.b.b #25	ENSGT00950000182986.b #26	ENSGT00390000004808.e #27	ENSGT00940000166129 #28	ENSGT00390000001737 #29	ENSGT00940000158915 #30	ENSGT00940000159465 #31	ENSGT00940000155107.a.a.a #32	ENSGT00990000204035 #33	ENSGT00940000156762 #35	ENSGT00940000157291 #36	ENSGT00390000015364.b #37	ENSGT00390000016054.b.i
P. nyererei	MODERN SPECIES	362	SRSF10 (ENSPNYG00000012923)	pnrc2 (ENSPNYG00000012942) #7	cnr2 (ENSPNYG00000012954) #8	akirin1 (ENSPNYG00000012970) #9	rhbdl2 (ENSPNYG00000013006) #10	MYCBP (ENSPNYG00000013028) #12	rragca (ENSPNYG00000013099) #13	pou3f1 (ENSPNYG00000013130) #14	utp11 (ENSPNYG00000013140) #15	FHL3 (ENSPNYG00000013162) #16	rspo1 (ENSPNYG00000013177) #17	ENSPNYG00000013195	dnali1 (ENSPNYG00000013211) #19	SNIP1 (ENSPNYG00000013230) #20	ENSPNYG00000013247 #21	MAP7D1 (ENSPNYG00000013285) #22	THRAP3 (ENSPNYG00000013314) #23	sh3d21 (ENSPNYG00000013339) #24	eva1ba (ENSPNYG00000013357) #25	STK40 (ENSPNYG00000013365) #26	ENSPNYG00000013399 #27	ENSPNYG00000013414 #28	mrps15 (ENSPNYG00000013431) #29	csf3r (ENSPNYG00000013467) #30	GRIK3 (ENSPNYG00000013498) #31	ZC3H12A (ENSPNYG00000013534) #32	ENSPNYG00000013556	INPP5B (ENSPNYG00000013593) #35	mtf1 (ENSPNYG00000013739) #36	yrdc (ENSPNYG00000013956) #37	MANEAL (ENSPNYG00000013969)
Haplochromini_B	ANCESTRAL SPECIES	6	ENSGT00530000063881.a.b #7	ENSGT01060000248564.a.b #8	ENSGT00940000158787 #9	ENSGT00940000159442 #10	ENSGT00390000017974.nb #12	ENSGT00950000183031.A.a.a #13	ENSGT00940000165372 #14	ENSGT00390000005813 #15	ENSGT00950000183028.a.b.a #16	ENSGT00940000158871 #17	ENSGT00940000166920	ENSGT00810000125524 #18	ENSGT00390000003012 #19	ENSGT00940000156553 #20	ENSGT00940000159398 #21	ENSGT00950000182941.a.a.b.e.a.b #22	ENSGT00950000183163.a.a.ab #23	ENSGT00940000160627 #24	ENSGT00940000154096.b.b.b.b.b #25	ENSGT00950000182986.b #26	ENSGT00390000004808.e #27	ENSGT00940000166129 #28	ENSGT00390000001737 #29	ENSGT00940000158915 #30	ENSGT00940000159465 #31	ENSGT00940000155107.a.a.a #32	ENSGT00990000204035 #33	ENSGT00940000156762 #35	ENSGT00940000157291 #36	ENSGT00390000015364.b #37	ENSGT00390000016054.b.i
Zebra mbuna	MODERN SPECIES	1093	ENSMZEG00005007618	ENSMZEG00005007606	xrcc1 (ENSMZEG00005007596)	drd2l (ENSMZEG00005007578)	ethe1 (ENSMZEG00005007552)	ethe1 (ENSMZEG00005007535)	ENSMZEG00005007520	ENSMZEG00005007501	irgq2 (ENSMZEG00005007489)	ENSMZEG00005007454	cox5aa (ENSMZEG00005007429)	gnl2 (ENSMZEG00005007393) #18	dnali1 (ENSMZEG00005007377) #19	SNIP1 (ENSMZEG00005007365) #20	ENSMZEG00005007342 #21	MAP7D1 (ENSMZEG00005007251) #22	THRAP3 (ENSMZEG00005007212) #23	sh3d21 (ENSMZEG00005007196) #24	eva1ba (ENSMZEG00005007187) #25	STK40 (ENSMZEG00005007149) #26	OSCP1 (ENSMZEG00005007120) #27	ENSMZEG00005007095 #28	mrps15 (ENSMZEG00005007070) #29	csf3r (ENSMZEG00005007036) #30	GRIK3 (ENSMZEG00005007006) #31	ZC3H12A (ENSMZEG00005006997) #32	ENSMZEG00005006991 #33	ENSMZEG00005006982	INPP5B (ENSMZEG00005006964) #35	mtf1 (ENSMZEG00005006956) #36	yrdc (ENSMZEG00005006948) #37
Eastern happy	MODERN SPECIES	2	SRSF10 (ENSACLG00000000662)	pnrc2 (ENSACLG00000000649) #7	cnr2 (ENSACLG00000000646) #8	akirin1 (ENSACLG00000000618) #9	rhbdl2 (ENSACLG00000000595) #10	MYCBP (ENSACLG00000000565) #12	rragca (ENSACLG00000000534) #13	pou3f1 (ENSACLG00000000389) #14	utp11 (ENSACLG00000000339) #15	FHL3 (ENSACLG00000000312) #16	rspo1 (ENSACLG00000000298) #17	dnali1 (ENSACLG00000000265) #19	ENSACLG00000000115	SNIP1 (ENSACLG00000000108) #20	ENSACLG00000000084 #21	MAP7D1 (ENSACLG00000000048) #22	ENSACLG00000027855	THRAP3 (ENSACLG00000027851) #23	sh3d21 (ENSACLG00000027848) #24	eva1ba (ENSACLG00000027847) #25	STK40 (ENSACLG00000027839) #26	OSCP1 (ENSACLG00000027829) #27	ENSACLG00000027824 #28	mrps15 (ENSACLG00000027820) #29	csf3r (ENSACLG00000027809) #30	GRIK3 (ENSACLG00000027806) #31	ZC3H12A (ENSACLG00000027801) #32	ENSACLG00000027799 #33	INPP5B (ENSACLG00000027782) #35	mtf1 (ENSACLG00000027779) #36	yrdc (ENSACLG00000027775) #37
Burton s mouthbrooder	MODERN SPECIES	340	SRSF10 (ENSHBUG00000010070)	pnrc2 (ENSHBUG00000010043) #7	cnr2 (ENSHBUG00000010030) #8	akirin1 (ENSHBUG00000010024) #9	rhbdl2 (ENSHBUG00000009992) #10	MYCBP (ENSHBUG00000009957) #12	rragca (ENSHBUG00000009931) #13	pou3f1 (ENSHBUG00000009911) #14	utp11 (ENSHBUG00000009895) #15	FHL3 (ENSHBUG00000009864) #16	rspo1 (ENSHBUG00000009811) #17	ENSHBUG00000000835	dnali1 (ENSHBUG00000009777) #19	SNIP1 (ENSHBUG00000009756) #20	ENSHBUG00000009741 #21	MAP7D1 (ENSHBUG00000009652) #22	THRAP3 (ENSHBUG00000009602) #23	sh3d21 (ENSHBUG00000009579) #24	eva1ba (ENSHBUG00000009558) #25	STK40 (ENSHBUG00000009547) #26	OSCP1 (ENSHBUG00000009513) #27	ENSHBUG00000009469 #28	mrps15 (ENSHBUG00000009456) #29	csf3r (ENSHBUG00000009429) #30	GRIK3 (ENSHBUG00000009396) #31	ZC3H12A (ENSHBUG00000009356) #32	INPP5B (ENSHBUG00000009350) #35	mtf1 (ENSHBUG00000009314) #36	yrdc (ENSHBUG00000009298) #37	MANEAL (ENSHBUG00000009290)	LIN28A (ENSHBUG00000009265)
Lyretail cichlid	MODERN SPECIES	311	ENSNBRG00000010616	pnrc2 (ENSNBRG00000010605) #7	cnr2 (ENSNBRG00000010586) #8	akirin1 (ENSNBRG00000010549) #9	rhbdl2 (ENSNBRG00000010511) #10	MYCBP (ENSNBRG00000010493) #12	rragca (ENSNBRG00000010467) #13	pou3f1 (ENSNBRG00000010456) #14	utp11 (ENSNBRG00000010435) #15	FHL3 (ENSNBRG00000010416) #16	rspo1 (ENSNBRG00000010347) #17	gnl2 (ENSNBRG00000010291) #18	dnali1 (ENSNBRG00000010268) #19	SNIP1 (ENSNBRG00000010257) #20	ENSNBRG00000010049 #21	MAP7D1 (ENSNBRG00000010005) #22	THRAP3 (ENSNBRG00000009991) #23	sh3d21 (ENSNBRG00000009956) #24	eva1ba (ENSNBRG00000009946) #25	STK40 (ENSNBRG00000009915) #26	OSCP1 (ENSNBRG00000009883) #27	ENSNBRG00000009860 #28	mrps15 (ENSNBRG00000009851) #29	csf3r (ENSNBRG00000009712) #30	ENSNBRG00000009681	GRIK3 (ENSNBRG00000009631) #31	ZC3H12A (ENSNBRG00000009607) #32	ENSNBRG00000009581	ENSNBRG00000009571 #35	ENSNBRG00000009559 #35	mtf1 (ENSNBRG00000009532) #36
Nile tilapia	MODERN SPECIES	2	ENSONIG00000028387	cnr2 (ENSONIG00000016314) #8	akirin1 (ENSONIG00000039753) #9	rhbdl2 (ENSONIG00000016311) #10	MYCBP (ENSONIG00000035578) #12	rragc (ENSONIG00000032190) #13	pou3f1 (ENSONIG00000021113) #14	utp11 (ENSONIG00000033069) #15	fhl3 (ENSONIG00000013661) #16	rspo1 (ENSONIG00000016302) #17	ENSONIG00000016291	dnali1 (ENSONIG00000016300) #19	SNIP1 (ENSONIG00000016290) #20	ENSONIG00000041284	ENSONIG00000016285 #21	MAP7D1 (ENSONIG00000016283) #22	THRAP3 (ENSONIG00000016278) #23	sh3d21 (ENSONIG00000016273) #24	eva1b (ENSONIG00000042590) #25	STK40 (ENSONIG00000037285) #26	OSCP1 (ENSONIG00000016265) #27	ENSONIG00000043059 #28	mrps15 (ENSONIG00000016261) #29	csf3r (ENSONIG00000016254) #30	GRIK3 (ENSONIG00000016238) #31	ZC3H12A (ENSONIG00000016235) #32	ENSONIG00000037129 #33	ENSONIG00000030694	INPP5B (ENSONIG00000016229) #35	mtf1 (ENSONIG00000016218) #36	yrdc (ENSONIG00000016213) #37
Midas cichlid	MODERN SPECIES	668	pnrc2 (ENSACIG00000018693) #7	cnr2 (ENSACIG00000018688) #8	akirin1 (ENSACIG00000018678) #9	rhbdl2 (ENSACIG00000018661) #10	ENSACIG00000018646	MYCBP (ENSACIG00000018598) #12	rragca (ENSACIG00000018548) #13	pou3f1 (ENSACIG00000018538) #14	utp11 (ENSACIG00000018523) #15	FHL3 (ENSACIG00000018508) #16	rspo1 (ENSACIG00000018378) #17	gnl2 (ENSACIG00000018346) #18	dnali1 (ENSACIG00000018337) #19	SNIP1 (ENSACIG00000018325) #20	ENSACIG00000018194 #21	MAP7D1 (ENSACIG00000018142) #22	THRAP3 (ENSACIG00000018110) #23	ENSACIG00000018107	sh3d21 (ENSACIG00000018083) #24	eva1ba (ENSACIG00000018069) #25	STK40 (ENSACIG00000018038) #26	OSCP1 (ENSACIG00000018007) #27	ENSACIG00000017948 #28	mrps15 (ENSACIG00000017933) #29	csf3r (ENSACIG00000017809) #30	GRIK3 (ENSACIG00000017772) #31	ZC3H12A (ENSACIG00000017750) #32	INPP5B (ENSACIG00000017714) #35	mtf1 (ENSACIG00000017387) #36	yrdc (ENSACIG00000017330) #37	MANEAL (ENSACIG00000017324)
Atherinomorphae	ANCESTRAL SPECIES		ENSGT00530000063881.a.b #7	ENSGT01060000248564.a.b #8	ENSGT00940000158787 #9	ENSGT00940000159442 #10	ENSGT01090000260070.C.a #11	ENSGT00390000017974.nb #12	ENSGT00950000183031.A.a.a #13	ENSGT00940000165372 #14	ENSGT00390000005813 #15	ENSGT00950000183028.a.b.a #16	ENSGT00940000158871 #17	ENSGT00810000125524 #18	ENSGT00390000003012 #19	ENSGT00940000156553 #20	ENSGT00940000159398 #21	ENSGT00950000182941.a.a.b.e.a.b #22	ENSGT00950000183163.a.a.ab #23	ENSGT00940000160627 #24	ENSGT00940000154096.b.b.b.b.b #25	ENSGT00950000182986.b #26	ENSGT00390000004808.e #27	ENSGT00940000166129 #28	ENSGT00390000001737 #29	ENSGT00940000158915 #30	ENSGT00530000068429	ENSGT00940000159465 #31	ENSGT00940000155107.a.a.a #32	ENSGT00990000204035 #33	ENSGT00600000085609	ENSGT00940000156762 #35	ENSGT00940000157291 #36
Cyprinodontiformes	ANCESTRAL SPECIES		ENSGT00530000063881.a.b #7	ENSGT01060000248564.a.b #8	ENSGT00940000158787 #9	ENSGT00940000159442 #10	ENSGT01090000260070.C.a #11	ENSGT00390000017974.nb #12	ENSGT00950000183031.A.a.a #13	ENSGT00940000165372 #14	ENSGT00390000005813 #15	ENSGT00950000183028.a.b.a #16	ENSGT00940000158871 #17	ENSGT00810000125524 #18	ENSGT00390000003012 #19	ENSGT00940000156553 #20	ENSGT00940000159398 #21	ENSGT00950000182941.a.a.b.e.a.b #22	ENSGT00950000183163.a.a.ab #23	ENSGT00940000160627 #24	ENSGT00940000154096.b.b.b.b.b #25	ENSGT00950000182986.b #26	ENSGT00390000004808.e #27	ENSGT00940000166129 #28	ENSGT00390000001737 #29	ENSGT00940000158915 #30	ENSGT00530000068429	ENSGT00940000159465 #31	ENSGT00940000155107.a.a.a #32	ENSGT00990000204035 #33	ENSGT00600000085609	ENSGT00940000156762 #35	ENSGT00940000157291 #36
Aplocheiloidei	ANCESTRAL SPECIES	2	ENSGT00940000164147.a	ENSGT00530000063881.a.b #7	ENSGT01060000248564.a.b #8	ENSGT00940000158787 #9	ENSGT00940000159442 #10	ENSGT00390000017974.nb #12	ENSGT00950000183031.A.a.a #13	ENSGT00940000165372 #14	ENSGT00390000005813 #15	ENSGT00950000183028.a.b.a #16	ENSGT00940000158871 #17	ENSGT00810000125524 #18	ENSGT00390000003012 #19	ENSGT00940000156553 #20	ENSGT00940000159398 #21	ENSGT00950000182941.a.a.b.e.a.b #22	ENSGT00950000183163.a.a.ab #23	ENSGT00940000160627 #24	ENSGT00940000154096.b.b.b.b.b #25	ENSGT00950000182986.b #26	ENSGT00390000004808.e #27	ENSGT00940000166129 #28	ENSGT00390000001737 #29	ENSGT00940000158915 #30	ENSGT00940000159465 #31	ENSGT00940000155107.a.a.a #32	ENSGT00990000204035 #33	ENSGT00940000156762 #35	ENSGT00940000157291 #36	ENSGT00390000015364.b #37	ENSGT00390000016054.b.i
Mangrove rivulus	MODERN SPECIES	73	fabp10a (ENSKMAG00000019147)	pnrc2 (ENSKMAG00000019136) #7	cnr2 (ENSKMAG00000019129) #8	akirin1 (ENSKMAG00000019113) #9	rhbdl2 (ENSKMAG00000019086) #10	ENSKMAG00000019064 #12	rragca (ENSKMAG00000019035) #13	pou3f1 (ENSKMAG00000019017) #14	utp11 (ENSKMAG00000018988) #15	FHL3 (ENSKMAG00000018962) #16	rspo1 (ENSKMAG00000018927) #17	gnl2 (ENSKMAG00000018855) #18	dnali1 (ENSKMAG00000018825) #19	SNIP1 (ENSKMAG00000018806) #20	MAP3K6 (ENSKMAG00000018751) #21	ENSKMAG00000018674 #22	ENSKMAG00000018581	nampt2 (ENSKMAG00000018545)	LDLRAD2 (ENSKMAG00000018524)	ENSKMAG00000018496	ENSKMAG00000018456	camk1ga (ENSKMAG00000018425)	USP48 (ENSKMAG00000018330)	ENSKMAG00000018292	cyb561d1 (ENSKMAG00000018272)	atxn7l2a (ENSKMAG00000018254)	sypl2a (ENSKMAG00000018238)	fbxo2 (ENSKMAG00000018221)	svbp (ENSKMAG00000018202)
Turquoise killifish	MODERN SPECIES	1614	MYOM3 (ENSNFUG00015020150)	ENSNFUG00015020175	FABP10A (ENSNFUG00015020177)	PNRC2 (ENSNFUG00015020180) #7	cnr2 (ENSNFUG00015020184) #8	ENSNFUG00015020185	ENSNFUG00015020190	POU3F1 (ENSNFUG00015020193) #14	utp11 (ENSNFUG00015020196) #15	FHL3 (ENSNFUG00015020200) #16	RSPO1 (ENSNFUG00015020203) #17	GNL2 (ENSNFUG00015020230) #18	DNALI1 (ENSNFUG00015020891) #19	SNIP1 (ENSNFUG00015020894) #20	MAP3K6 (ENSNFUG00015000154) #21	MAP7D1 (ENSNFUG00015000327) #22	THRAP3 (ENSNFUG00015000347) #23	SH3D21 (ENSNFUG00015000370) #24	EVA1BA (ENSNFUG00015000393) #25	STK40 (ENSNFUG00015000432) #26	CNFN (ENSNFUG00015000488) #28	MRPS15 (ENSNFUG00015000499) #29	GRIK3 (ENSNFUG00015000661) #31	ZC3H12A (ENSNFUG00015000897) #32	ENSNFUG00015000899 #33	INPP5B (ENSNFUG00015000938) #35	MTF1 (ENSNFUG00015001054) #36	YRDC (ENSNFUG00015001069) #37	MANEAL (ENSNFUG00015001077)	LIN28A (ENSNFUG00015001082)	MECR (ENSNFUG00015001090)
Cyprinodontoidei	ANCESTRAL SPECIES		ENSGT00530000063881.a.b #7	ENSGT01060000248564.a.b #8	ENSGT00940000158787 #9	ENSGT00940000159442 #10	ENSGT01090000260070.C.a #11	ENSGT00390000017974.nb #12	ENSGT00950000183031.A.a.a #13	ENSGT00940000165372 #14	ENSGT00390000005813 #15	ENSGT00950000183028.a.b.a #16	ENSGT00940000158871 #17	ENSGT00810000125524 #18	ENSGT00390000003012 #19	ENSGT00940000156553 #20	ENSGT00940000159398 #21	ENSGT00950000182941.a.a.b.e.a.b #22	ENSGT00950000183163.a.a.ab #23	ENSGT00940000160627 #24	ENSGT00940000154096.b.b.b.b.b #25	ENSGT00950000182986.b #26	ENSGT00390000004808.e #27	ENSGT00940000166129 #28	ENSGT00390000001737 #29	ENSGT00940000158915 #30	ENSGT00530000068429	ENSGT00940000159465 #31	ENSGT00940000155107.a.a.a #32	ENSGT00990000204035 #33	ENSGT00600000085609	ENSGT00940000156762 #35	ENSGT00940000157291 #36
NAME_4	ANCESTRAL SPECIES	55	ENSGT00530000063881.a.b #7	ENSGT01060000248564.a.b #8	ENSGT00940000158787 #9	ENSGT00940000159442 #10	ENSGT01090000260070.C.a #11	ENSGT00390000017974.nb #12	ENSGT00950000183031.A.a.a #13	ENSGT00940000165372 #14	ENSGT00390000005813 #15	ENSGT00950000183028.a.b.a #16	ENSGT00940000158871 #17	ENSGT00810000125524 #18	ENSGT00390000003012 #19	ENSGT00940000156553 #20	ENSGT00940000159398 #21	ENSGT00950000182941.a.a.b.e.a.b #22	ENSGT00950000183163.a.a.ab #23	ENSGT00940000160627 #24	ENSGT00940000154096.b.b.b.b.b #25	ENSGT00950000182986.b #26	ENSGT00390000004808.e #27	ENSGT00940000171773	ENSGT00390000001737 #29	ENSGT00940000158915 #30	ENSGT00940000159465 #31	ENSGT00940000155107.a.a.a #32	ENSGT00990000204035 #33	ENSGT00940000156762 #35	ENSGT00940000157291 #36	ENSGT00390000015364.b #37	ENSGT00390000016054.b.i
Mummichog	MODERN SPECIES	2410																MAP7D1 (ENSFHEG00000000983) #22	THRAP3 (ENSFHEG00000000989) #23	sh3d21 (ENSFHEG00000000996) #24	eva1ba (ENSFHEG00000001000) #25	STK40 (ENSFHEG00000001002) #26	OSCP1 (ENSFHEG00000001008) #27	ENSFHEG00000001010	mrps15 (ENSFHEG00000001013) #29	csf3r (ENSFHEG00000001015) #30	GRIK3 (ENSFHEG00000001018) #31	ZC3H12A (ENSFHEG00000001019) #32	INPP5B (ENSFHEG00000001022) #35	mtf1 (ENSFHEG00000001026) #36	yrdc (ENSFHEG00000001029) #37	MANEAL (ENSFHEG00000001033)	ENSFHEG00000001035
Sheepshead minnow	MODERN SPECIES	118	pnrc2 (ENSCVAG00000018099) #7	cnr2 (ENSCVAG00000018091) #8	akirin1 (ENSCVAG00000018071) #9	rhbdl2 (ENSCVAG00000018052) #10	GJA9 (ENSCVAG00000018024) #11	ENSCVAG00000018007 #12	rragca (ENSCVAG00000017979) #13	pou3f1 (ENSCVAG00000017958) #14	utp11 (ENSCVAG00000000900) #15	FHL3 (ENSCVAG00000017747) #16	rspo1 (ENSCVAG00000000459) #17	gnl2 (ENSCVAG00000017712) #18	dnali1 (ENSCVAG00000017701) #19	snip1 (ENSCVAG00000017689)	MAP3K6 (ENSCVAG00000017684) #21	MAP7D1 (ENSCVAG00000017671) #22	THRAP3 (ENSCVAG00000017634) #23	sh3d21 (ENSCVAG00000017624) #24	eva1ba (ENSCVAG00000017604) #25	STK40 (ENSCVAG00000017594) #26	OSCP1 (ENSCVAG00000017554) #27	ENSCVAG00000017521	mrps15 (ENSCVAG00000017500) #29	csf3r (ENSCVAG00000017491) #30	GRIK3 (ENSCVAG00000017478) #31	ZC3H12A (ENSCVAG00000017420) #32	ENSCVAG00000017412 #33	INPP5B (ENSCVAG00000017401) #35	mtf1 (ENSCVAG00000017389) #36	yrdc (ENSCVAG00000017355) #37	MANEAL (ENSCVAG00000017347)
Poeciliinae	ANCESTRAL SPECIES		ENSGT00940000164147.a	ENSGT00530000063881.a.b #7	ENSGT01060000248564.a.b #8	ENSGT00940000158787 #9	ENSGT00940000159442 #10	ENSGT00390000017974.nb #12	ENSGT00950000183031.A.a.a #13	ENSGT00940000165372 #14	ENSGT00390000005813 #15	ENSGT00950000183028.a.b.a #16	ENSGT00940000158871 #17	ENSGT00810000125524 #18	ENSGT00390000003012 #19	ENSGT00940000156553 #20	ENSGT00940000159398 #21	ENSGT00950000182941.a.a.b.e.a.b #22	ENSGT00950000183163.a.a.ab #23	ENSGT00940000160627 #24	ENSGT00940000154096.b.b.b.b.b #25	ENSGT00950000182986.b #26	ENSGT00390000004808.e #27	ENSGT00940000166129 #28	ENSGT00390000001737 #29	ENSGT00940000158915 #30	ENSGT00530000068429	ENSGT00940000159465 #31	ENSGT00940000155107.a.a.a #32	ENSGT00990000204035 #33	ENSGT00600000085609	ENSGT00940000156762 #35	ENSGT00940000157291 #36
Poecilia	ANCESTRAL SPECIES		ENSGT00940000164147.a	ENSGT00530000063881.a.b #7	ENSGT01060000248564.a.b #8	ENSGT00940000158787 #9	ENSGT00940000159442 #10	ENSGT00390000017974.nb #12	ENSGT00950000183031.A.a.a #13	ENSGT00940000165372 #14	ENSGT00390000005813 #15	ENSGT00950000183028.a.b.a #16	ENSGT00940000158871 #17	ENSGT00810000125524 #18	ENSGT00390000003012 #19	ENSGT00940000156553 #20	ENSGT00940000159398 #21	ENSGT00950000182941.a.a.b.e.a.b #22	ENSGT00950000183163.a.a.ab #23	ENSGT00940000160627 #24	ENSGT00940000154096.b.b.b.b.b #25	ENSGT00950000182986.b #26	ENSGT00390000004808.e #27	ENSGT00940000166129 #28	ENSGT00390000001737 #29	ENSGT00940000158915 #30	ENSGT00530000068429	ENSGT00940000159465 #31	ENSGT00940000155107.a.a.a #32	ENSGT00990000204035 #33	ENSGT00600000085609	ENSGT00940000156762 #35	ENSGT00940000157291 #36
NAME_6	ANCESTRAL SPECIES	152												ENSGT00810000125524 #18	ENSGT00390000003012 #19	ENSGT00940000156553 #20	ENSGT00940000159398 #21	ENSGT00950000182941.a.a.b.e.a.b #22	ENSGT00950000183163.a.a.ab #23	ENSGT00940000160627 #24	ENSGT00940000154096.b.b.b.b.b #25	ENSGT00950000182986.b #26	ENSGT00390000004808.e #27	ENSGT00940000171773	ENSGT00390000001737 #29	ENSGT00940000158915 #30	ENSGT00530000068429	ENSGT00940000159465 #31	ENSGT00940000155107.a.a.a #32	ENSGT00990000204035 #33	ENSGT00600000085609	ENSGT00940000156762 #35	ENSGT00940000157291 #36
Amazon molly	MODERN SPECIES	337												gnl2 (ENSPFOG00000012893) #18	dnali1 (ENSPFOG00000012981) #19	SNIP1 (ENSPFOG00000013016) #20	MAP3K6 (ENSPFOG00000013047) #21	MAP7D1 (ENSPFOG00000013255) #22	THRAP3 (ENSPFOG00000013297) #23	sh3d21 (ENSPFOG00000013375) #24	eva1ba (ENSPFOG00000013421) #25	STK40 (ENSPFOG00000013431) #26	OSCP1 (ENSPFOG00000013493) #27	ENSPFOG00000013535	mrps15 (ENSPFOG00000013553) #29	csf3r (ENSPFOG00000013594) #30	ENSPFOG00000022696	GRIK3 (ENSPFOG00000013674) #31	ZC3H12A (ENSPFOG00000013935) #32	ENSPFOG00000013949 #33	ENSPFOG00000022057	INPP5B (ENSPFOG00000013954) #35	mtf1 (ENSPFOG00000013962) #36
Sailfin molly	MODERN SPECIES	684												gnl2 (ENSPLAG00000012483) #18	dnali1 (ENSPLAG00000000807) #19	SNIP1 (ENSPLAG00000012467) #20	MAP3K6 (ENSPLAG00000012456) #21	MAP7D1 (ENSPLAG00000000527) #22	THRAP3 (ENSPLAG00000000635) #23	sh3d21 (ENSPLAG00000012341) #24	eva1ba (ENSPLAG00000012312) #25	STK40 (ENSPLAG00000012294) #26
Guppy	MODERN SPECIES	446	fabp10a (ENSPREG00000006252)	pnrc2 (ENSPREG00000006242) #7	cnr2 (ENSPREG00000006231) #8	akirin1 (ENSPREG00000006214) #9	rhbdl2 (ENSPREG00000006169) #10	ENSPREG00000006142 #12	rragca (ENSPREG00000006113) #13	pou3f1 (ENSPREG00000006101) #14	utp11 (ENSPREG00000006068) #15	FHL3 (ENSPREG00000006051) #16	rspo1 (ENSPREG00000006040) #17	gnl2 (ENSPREG00000005988) #18	dnali1 (ENSPREG00000005961) #19	snip1 (ENSPREG00000005952)	MAP3K6 (ENSPREG00000005903) #21	MAP7D1 (ENSPREG00000005854) #22	THRAP3 (ENSPREG00000005816) #23	sh3d21 (ENSPREG00000005794) #24	eva1ba (ENSPREG00000005771) #25	STK40 (ENSPREG00000005733) #26	OSCP1 (ENSPREG00000005686) #27	ENSPREG00000005621 #28	mrps15 (ENSPREG00000005592) #29	csf3r (ENSPREG00000005562) #30	GRIK3 (ENSPREG00000005481) #31	ZC3H12A (ENSPREG00000005453) #32	ENSPREG00000005442 #33	INPP5B (ENSPREG00000005365) #35	mtf1 (ENSPREG00000005331) #36	yrdc (ENSPREG00000005285) #37	MANEAL (ENSPREG00000005276)
Platyfish	MODERN SPECIES	17	fabp10a (ENSXMAG00000025668)	pnrc2 (ENSXMAG00000019531) #7	cnr2 (ENSXMAG00000013232) #8	akirin1 (ENSXMAG00000013230) #9	rhbdl2 (ENSXMAG00000002343) #10	ENSXMAG00000013229 #12	rragca (ENSXMAG00000026290) #13	pou3f1 (ENSXMAG00000019529) #14	utp11 (ENSXMAG00000013219) #15	FHL3 (ENSXMAG00000029691) #16	rspo1 (ENSXMAG00000028817) #17	gnl2 (ENSXMAG00000014898) #18	dnali1 (ENSXMAG00000014886) #19	SNIP1 (ENSXMAG00000014885) #20	ENSXMAG00000014853 #21	MAP7D1 (ENSXMAG00000014815) #22	THRAP3 (ENSXMAG00000014797) #23	sh3d21 (ENSXMAG00000001593) #24	eva1ba (ENSXMAG00000001589) #25	STK40 (ENSXMAG00000029028) #26	OSCP1 (ENSXMAG00000014752) #27	ENSXMAG00000024500 #28	mrps15 (ENSXMAG00000028874) #29	csf3r (ENSXMAG00000014732) #30	GRIK3 (ENSXMAG00000014647) #31	ZC3H12A (ENSXMAG00000014646) #32	ENSXMAG00000021281 #33	INPP5B (ENSXMAG00000014629) #35	mtf1 (ENSXMAG00000014614) #36	yrdc (ENSXMAG00000014606) #37	MANEAL (ENSXMAG00000014596)
Oryzias	ANCESTRAL SPECIES	2	ENSGT00530000063881.a.b #7	ENSGT01060000248564.a.b #8	ENSGT00940000158787 #9	ENSGT00940000159442 #10	ENSGT01090000260070.C.a #11	ENSGT00390000017974.nb #12	ENSGT00950000183031.A.a.a #13	ENSGT00940000165372 #14	ENSGT00390000005813 #15	ENSGT00950000183028.a.b.a #16	ENSGT00940000158871 #17	ENSGT00810000125524 #18	ENSGT00390000003012 #19	ENSGT00940000156553 #20	ENSGT00940000159398 #21	ENSGT00950000182941.a.a.b.e.a.b #22	ENSGT00950000183163.a.a.ab #23	ENSGT00940000160627 #24	ENSGT00940000154096.b.b.b.b.b #25	ENSGT00950000182986.b #26	ENSGT00390000004808.e #27	ENSGT00940000166129 #28	ENSGT00390000001737 #29	ENSGT00940000158915 #30	ENSGT00940000159465 #31	ENSGT00940000155107.a.a.a #32	ENSGT00990000204035 #33	ENSGT00940000156762 #35	ENSGT00940000157291 #36	ENSGT00390000015364.b #37	ENSGT00390000016054.b.i
Oryzias_b	ANCESTRAL SPECIES	1	ENSGT00940000164147.a	ENSGT00530000063881.a.b #7	ENSGT01060000248564.a.b #8	ENSGT00940000158787 #9	ENSGT00940000159442 #10	ENSGT01090000260070.C.a #11	ENSGT00390000017974.nb #12	ENSGT00940000165372 #14	ENSGT00390000005813 #15	ENSGT00950000183028.a.b.a #16	ENSGT00940000158871 #17	ENSGT00810000125524 #18	ENSGT00390000003012 #19	ENSGT00940000156553 #20	ENSGT00940000159398 #21	ENSGT00950000182941.a.a.b.e.a.b #22	ENSGT00950000183163.a.a.ab #23	ENSGT00940000160627 #24	ENSGT00940000154096.b.b.b.b.b #25	ENSGT00950000182986.b #26	ENSGT00390000004808.e #27	ENSGT00940000166129 #28	ENSGT00390000001737 #29	ENSGT00940000158915 #30	ENSGT00940000159465 #31	ENSGT00940000155107.a.a.a #32	ENSGT00990000204035 #33	ENSGT00940000156762 #35	ENSGT00940000157291 #36	ENSGT00390000015364.b #37	ENSGT00390000016054.b.i
Javanese ricefish	MODERN SPECIES	7	pnrc2 (ENSOJAG00000008605) #7	cnr2 (ENSOJAG00000008565) #8	akirin1 (ENSOJAG00000008552) #9	rhbdl2 (ENSOJAG00000008540) #10	GJA9 (ENSOJAG00000008511) #11	MYCBP (ENSOJAG00000008501) #12	rragca (ENSOJAG00000008450) #13	pou3f1 (ENSOJAG00000008412) #14	utp11 (ENSOJAG00000008374) #15	FHL3 (ENSOJAG00000008350) #16	rspo1 (ENSOJAG00000008324) #17	gnl2 (ENSOJAG00000008221) #18	dnali1 (ENSOJAG00000008190) #19	SNIP1 (ENSOJAG00000008177) #20	ENSOJAG00000006023 #21	MAP7D1 (ENSOJAG00000005723) #22	ENSOJAG00000005706	THRAP3 (ENSOJAG00000005670) #23	sh3d21 (ENSOJAG00000005635) #24	eva1ba (ENSOJAG00000005620) #25	STK40 (ENSOJAG00000005584) #26	ENSOJAG00000005568 #28	OSCP1 (ENSOJAG00000005328) #27	CSF3R (ENSOJAG00000005292) #30	GRIK3 (ENSOJAG00000004802) #31	ENSOJAG00000004702	ZC3H12A (ENSOJAG00000004692) #32	ENSOJAG00000004681 #33	INPP5B (ENSOJAG00000003535) #35	mtf1 (ENSOJAG00000003279) #36	yrdc (ENSOJAG00000003259) #37
Indian medaka	MODERN SPECIES	5	pnrc2 (ENSOMEG00000019937) #7	cnr2 (ENSOMEG00000019931) #8	akirin1 (ENSOMEG00000019917) #9	rhbdl2 (ENSOMEG00000019884) #10	GJA9 (ENSOMEG00000019858) #11	ENSOMEG00000019842	MYCBP (ENSOMEG00000019821) #12	rragca (ENSOMEG00000000525) #13	FHL3 (ENSOMEG00000019712) #16	utp11 (ENSOMEG00000019654) #15	rspo1 (ENSOMEG00000019637) #17	gnl2 (ENSOMEG00000019611) #18	dnali1 (ENSOMEG00000019563) #19	snip1 (ENSOMEG00000019541)	MAP3K6 (ENSOMEG00000019496) #21	MAP7D1 (ENSOMEG00000019294) #22	THRAP3 (ENSOMEG00000019164) #23	sh3d21 (ENSOMEG00000019023) #24	eva1ba (ENSOMEG00000018998) #25	STK40 (ENSOMEG00000018961) #26	OSCP1 (ENSOMEG00000018874) #27	ENSOMEG00000018849	mrps15 (ENSOMEG00000000701) #29	csf3r (ENSOMEG00000000488) #30	GRIK3 (ENSOMEG00000018771) #31	ZC3H12A (ENSOMEG00000000483) #32	ENSOMEG00000018697 #33	INPP5B (ENSOMEG00000018665) #35	mtf1 (ENSOMEG00000018579) #36	yrdc (ENSOMEG00000018550) #37	MANEAL (ENSOMEG00000000478)
Oryzias_a	ANCESTRAL SPECIES	9	ENSGT00530000063881.a.b #7	ENSGT01060000248564.a.b #8	ENSGT00940000158787 #9	ENSGT00940000159442 #10	ENSGT01090000260070.C.a #11	ENSGT00390000017974.nb #12	ENSGT00950000183031.A.a.a #13	ENSGT00940000165372 #14	ENSGT00390000005813 #15	ENSGT00950000183028.a.b.a #16	ENSGT00940000158871 #17	ENSGT00810000125524 #18	ENSGT00390000003012 #19	ENSGT00940000156553 #20	ENSGT00940000159398 #21	ENSGT00950000182941.a.a.b.e.a.b #22	ENSGT00950000183163.a.a.ab #23	ENSGT00940000160627 #24	ENSGT00940000154096.b.b.b.b.b #25	ENSGT00950000182986.b #26	ENSGT00390000004808.e #27	ENSGT00940000166129 #28	ENSGT00390000001737 #29	ENSGT00940000158915 #30	ENSGT00940000159465 #31	ENSGT00940000155107.a.a.a #32	ENSGT00990000204035 #33	ENSGT00940000156762 #35	ENSGT00940000157291 #36	ENSGT00390000015364.b #37	ENSGT00390000016054.b.i
Japanese Medaka HdrR	MODERN SPECIES	7	cnr2 (ENSORLG00000014779) #8	akirin1 (ENSORLG00000014770) #9	rhbdl2 (ENSORLG00000014754) #10	GJA9 (ENSORLG00000022080) #11	MYCBP (ENSORLG00000024478) #12	rragca (ENSORLG00000014739) #13	pou3f1 (ENSORLG00000014708) #14	utp11 (ENSORLG00000014702) #15	ENSORLG00000021906	FHL3 (ENSORLG00000014671) #16	rspo1 (ENSORLG00000014653) #17	gnl2 (ENSORLG00000014645) #18	ENSORLG00000014620 #19	SNIP1 (ENSORLG00000014602) #20	ENSORLG00000014582 #21	MAP7D1 (ENSORLG00000014562) #22	THRAP3 (ENSORLG00000014550) #23	sh3d21 (ENSORLG00000014532) #24	eva1ba (ENSORLG00000014522) #25	STK40 (ENSORLG00000014517) #26	OSCP1 (ENSORLG00000014500) #27	ENSORLG00000028871 #28	mrps15 (ENSORLG00000014487) #29	CSF3R (ENSORLG00000014472) #30	ENSORLG00000026090	GRIK3 (ENSORLG00000014461) #31	ZC3H12A (ENSORLG00000014448) #32	INPP5B (ENSORLG00000014438) #35	mtf1 (ENSORLG00000014411) #36	yrdc (ENSORLG00000014393) #37	MANEAL (ENSORLG00000014388)
Chinese medaka	MODERN SPECIES	1121									utp11 (ENSOSIG00000008439) #15	FHL3 (ENSOSIG00000008444) #16	rspo1 (ENSOSIG00000008445) #17	gnl2 (ENSOSIG00000008451) #18	dnali1 (ENSOSIG00000008453) #19	SNIP1 (ENSOSIG00000008454) #20	ENSOSIG00000008457 #21	MAP7D1 (ENSOSIG00000008559) #22	THRAP3 (ENSOSIG00000008565) #23	sh3d21 (ENSOSIG00000008569) #24	eva1ba (ENSOSIG00000008574) #25	STK40 (ENSOSIG00000008577) #26	OSCP1 (ENSOSIG00000008586) #27	ENSOSIG00000008733 #28	mrps15 (ENSOSIG00000008734) #29	csf3r (ENSOSIG00000008736) #30	GRIK3 (ENSOSIG00000008739) #31	ENSOSIG00000011075	ZC3H12A (ENSOSIG00000011076) #32	ENSOSIG00000011078 #33	INPP5B (ENSOSIG00000011093) #35	mtf1 (ENSOSIG00000012847) #36	yrdc (ENSOSIG00000012916) #37
Tiger tail seahorse	MODERN SPECIES	319										FHL3 (ENSHCOG00000012021) #16	rspo1 (ENSHCOG00000012060) #17	gnl2 (ENSHCOG00000012109) #18	dnali1 (ENSHCOG00000012126) #19	SNIP1 (ENSHCOG00000012146) #20	ENSHCOG00000012157 #21	MAP7D1 (ENSHCOG00000012178) #22	sh3d21 (ENSHCOG00000012205) #24
Pinecone sodierfish	MODERN SPECIES	7	pnrc2 (ENSMMDG00005017854) #7	cnr2 (ENSMMDG00005017851) #8	akirin1 (ENSMMDG00005017848) #9	rhbdl2 (ENSMMDG00005017845) #10	GJA9 (ENSMMDG00005017842) #11	MYCBP (ENSMMDG00005017840) #12	rragca (ENSMMDG00005017838) #13	pou3f1 (ENSMMDG00005017837) #14	utp11 (ENSMMDG00005017835) #15	FHL3 (ENSMMDG00005017832) #16	rspo1 (ENSMMDG00005017827) #17	gnl2 (ENSMMDG00005017817) #18	dnali1 (ENSMMDG00005017815) #19	snip1 (ENSMMDG00005017814)	MAP3K6 (ENSMMDG00005015884) #21	MAP7D1 (ENSMMDG00005015855) #22	THRAP3 (ENSMMDG00005015833) #23	sh3d21 (ENSMMDG00005015819) #24	eva1ba (ENSMMDG00005015816) #25	STK40 (ENSMMDG00005015813) #26	OSCP1 (ENSMMDG00005015784) #27	ENSMMDG00005015782	mrps15 (ENSMMDG00005015781) #29	csf3r (ENSMMDG00005015763) #30	GRIK3 (ENSMMDG00005015674) #31	ENSMMDG00005015659	ZC3H12A (ENSMMDG00005015627) #32	INPP5B (ENSMMDG00005013409) #35	mtf1 (ENSMMDG00005013384) #36	yrdc (ENSMMDG00005013382) #37	MANEAL (ENSMMDG00005013381)
Protacanthopterygii	ANCESTRAL SPECIES	50								ENSGT00940000165372 #14	ENSGT00390000005813 #15	ENSGT00950000183028.a.b.a #16	ENSGT00940000158871 #17	ENSGT00810000125524 #18	ENSGT00390000003012 #19	ENSGT00940000156553 #20	ENSGT00940000159398 #21	ENSGT00950000182941.a.a.b.e.a.b #22	ENSGT01010000223313	ENSGT00940000156318.b.b	ENSGT00940000154063.C.a.a.b	ENSGT00950000183163.a.a.ab #23	ENSGT00940000160627 #24	ENSGT00940000154096.b.b.b.b.b #25	ENSGT00950000182986.b #26	ENSGT00390000004808.e #27	ENSGT01030000235168	ENSGT00390000001737 #29	ENSGT00940000158915 #30	ENSGT00940000159465 #31	ENSGT00940000155107.a.a.a #32	ENSGT00990000203803 #34	ENSGT00940000156762 #35
Salmoninae	DUPLICATION
Salmoninae	ANCESTRAL SPECIES	85	ENSGT00530000063881.a.b.s #7	ENSGT01060000248564.a.b.f #8	ENSGT00940000158787.g.a #9	ENSGT00940000159442.c #10	ENSGT01090000260070.C.a.d #11	ENSGT00390000017974.nb.c #12	ENSGT00950000183031.A.a.a.a.a #13	ENSGT00940000165372.c #14	ENSGT00390000005813.i #15	ENSGT00950000183028.a.b.a.e #16	ENSGT00940000158871.c #17	ENSGT00810000125524.c #18	ENSGT00390000003012 #19	ENSGT00940000156553.g #20	ENSGT00940000159398.d #21	ENSGT00950000182941.a.a.b.e.a.b.e #22	ENSGT00940000154063.C.a.a.b.j.a	ENSGT00950000183163.a.a.ab.c #23	ENSGT00940000160627.k #24	ENSGT00940000154096.b.b.b.b.b.b #25	ENSGT00950000182986.b.d #26	ENSGT00390000004808.e.b #27	ENSGT00390000001737.p #29	ENSGT00940000158915.ab.a #30	ENSGT00940000159465.c.a #31	ENSGT00940000155107.a.a.a.a #32	ENSGT00990000203803.c #34	ENSGT00940000156762.i #35	ENSGT00940000157291.j.b #36	ENSGT00390000015364.b.m #37	ENSGT00390000016054.b.i
Huchen	DUPLICATION
Huchen	MODERN SPECIES	193	cnr2 (ENSHHUG00000024447) #8	akirin1 (ENSHHUG00000024422) #9	rhbdl2 (ENSHHUG00000024388) #10	GJA9 (ENSHHUG00000024386) #11	ENSHHUG00000024370 #12	rragca (ENSHHUG00000024334) #13	pou3f1 (ENSHHUG00000024330) #14	utp11 (ENSHHUG00000024320) #15	FHL3 (ENSHHUG00000024316) #16	rspo1 (ENSHHUG00000024308) #17	ENSHHUG00000024306	gnl2 (ENSHHUG00000024270) #18	dnali1 (ENSHHUG00000024268) #19	SNIP1 (ENSHHUG00000039761) #20	MAP3K6 (ENSHHUG00000039558) #21	MAP7D1 (ENSHHUG00000039548) #22	ENSHHUG00000039543 #22	ENSHHUG00000039517	THRAP3 (ENSHHUG00000039505) #23	sh3d21 (ENSHHUG00000039486) #24	eva1ba (ENSHHUG00000039481) #25	STK40 (ENSHHUG00000039465) #26	ENSHHUG00000039453	OSCP1 (ENSHHUG00000039437) #27	ENSHHUG00000039417	csf3r (ENSHHUG00000039373) #30	GRIK3 (ENSHHUG00000039209) #31	ZC3H12A (ENSHHUG00000039189) #32	ENSHHUG00000039165 #34	INPP5B (ENSHHUG00000039010) #35	mtf1 (ENSHHUG00000038992) #36
Huchen	MODERN SPECIES	193	akirin1 (ENSHHUG00000024422) #9	rhbdl2 (ENSHHUG00000024388) #10	GJA9 (ENSHHUG00000024386) #11	ENSHHUG00000024370 #12	rragca (ENSHHUG00000024334) #13	pou3f1 (ENSHHUG00000024330) #14	utp11 (ENSHHUG00000024320) #15	FHL3 (ENSHHUG00000024316) #16	rspo1 (ENSHHUG00000024308) #17	ENSHHUG00000024306	gnl2 (ENSHHUG00000024270) #18	dnali1 (ENSHHUG00000024268) #19	SNIP1 (ENSHHUG00000039761) #20	MAP3K6 (ENSHHUG00000039558) #21	MAP7D1 (ENSHHUG00000039548) #22	ENSHHUG00000039543 #22	ENSHHUG00000039517	THRAP3 (ENSHHUG00000039505) #23	sh3d21 (ENSHHUG00000039486) #24	eva1ba (ENSHHUG00000039481) #25	STK40 (ENSHHUG00000039465) #26	ENSHHUG00000039453	OSCP1 (ENSHHUG00000039437) #27	ENSHHUG00000039417	csf3r (ENSHHUG00000039373) #30	GRIK3 (ENSHHUG00000039209) #31	ZC3H12A (ENSHHUG00000039189) #32	ENSHHUG00000039165 #34	INPP5B (ENSHHUG00000039010) #35	mtf1 (ENSHHUG00000038992) #36	yrdc (ENSHHUG00000038990) #37
Salmoninae_a	ANCESTRAL SPECIES	93	ENSGT00530000063881.a.b.s #7	ENSGT01060000248564.a.b.f #8	ENSGT00940000158787.g.a #9	ENSGT00940000159442.c.b #10	ENSGT01090000260070.C.a.d #11	ENSGT00390000017974.nb.c #12	ENSGT00950000183031.A.a.a.a.a #13	ENSGT00940000165372.c #14	ENSGT00390000005813.i #15	ENSGT00950000183028.a.b.a.e #16	ENSGT00940000158871.c #17	ENSGT00810000125524.c #18	ENSGT00390000003012 #19	ENSGT00940000156553.g #20	ENSGT00940000159398.d #21	ENSGT00950000182941.a.a.b.e.a.b.e #22	ENSGT00940000154063.C.a.a.b.j.a	ENSGT00950000183163.a.a.ab.c #23	ENSGT00940000160627.k #24	ENSGT00990000211290.B	ENSGT00940000154096.b.b.b.b.b.b #25	ENSGT00950000182986.b.d #26	ENSGT00390000004808.e.b #27	ENSGT01030000235168.c.a	ENSGT00390000001737.p #29	ENSGT00940000158915.ab.a #30	ENSGT00940000159465.c.a #31	ENSGT00940000155107.a.a.a.a #32	ENSGT00990000203803.c #34	ENSGT00940000156762.i #35	ENSGT00940000157291.j.b #36
Salmo	ANCESTRAL SPECIES	32	ENSGT00530000063881.a.b.s #7	ENSGT01060000248564.a.b.f #8	ENSGT00940000158787.g.a #9	ENSGT00940000159442.c.b #10	ENSGT01090000260070.C.a.d #11	ENSGT00390000017974.nb.c #12	ENSGT00950000183031.A.a.a.a.a #13	ENSGT00940000165372.c #14	ENSGT00390000005813.i #15	ENSGT00950000183028.a.b.a.e #16	ENSGT00940000158871.c #17	ENSGT00810000125524.c #18	ENSGT00390000003012 #19	ENSGT00940000156553.g #20	ENSGT00940000159398.d #21	ENSGT00950000182941.a.a.b.e.a.b.e #22	ENSGT00940000154063.C.a.a.b.j.a	ENSGT00950000183163.a.a.ab.c #23	ENSGT00940000160627.k #24	ENSGT00990000211290.B	ENSGT00940000154096.b.b.b.b.b.b #25	ENSGT00950000182986.b.d #26	ENSGT00390000004808.e.b #27	ENSGT01030000235168.d	ENSGT00390000001737.p #29	ENSGT00940000158915.ab.a #30	ENSGT00940000159465.c.a #31	ENSGT00940000155107.a.a.a.a #32	ENSGT00990000203803.c #34	ENSGT00940000156762.i #35	ENSGT00940000157291.j.b #36
Atlantic salmon	MODERN SPECIES	11	ENSSSAG00000074665	SRSF10 (ENSSSAG00000092388)	cnr2 (ENSSSAG00000042370) #8	akirin1 (ENSSSAG00000028046) #9	rhbdl2 (ENSSSAG00000042235) #10	GJA9 (ENSSSAG00000086489) #11	MYCBP (ENSSSAG00000111295) #12	rragc (ENSSSAG00000029084) #13	utp11 (ENSSSAG00000029460) #15	FHL3 (ENSSSAG00000110756) #16	rspo1 (ENSSSAG00000029819) #17	gnl2 (ENSSSAG00000030089) #18	dnali1 (ENSSSAG00000030760) #19	SNIP1 (ENSSSAG00000031003) #20	ENSSSAG00000031511 #21	MAP7D1 (ENSSSAG00000040212) #22	ENSSSAG00000040460	THRAP3 (ENSSSAG00000041257) #23	sh3d21 (ENSSSAG00000039492) #24	ENSSSAG00000041298	eva1ba (ENSSSAG00000097911) #25	STK40 (ENSSSAG00000100035) #26	OSCP1 (ENSSSAG00000041394) #27	mrps15 (ENSSSAG00000041549) #29	CSF3R (ENSSSAG00000041566) #30	GRIK3 (ENSSSAG00000041700) #31	ZC3H12A (ENSSSAG00000047150) #32	ENSSSAG00000114064 #34	INPP5B (ENSSSAG00000047240) #35	mtf1 (ENSSSAG00000051914) #36	yrdc (ENSSSAG00000051953) #37
River trout	MODERN SPECIES	30	cnr2 (ENSSTUG00000043585) #8	akirin1 (ENSSTUG00000043595) #9	rhbdl2 (ENSSTUG00000043631) #10	GJA9 (ENSSTUG00000043643) #11	ENSSTUG00000043663 #12	rragca (ENSSTUG00000043681) #13	pou3f1 (ENSSTUG00000043698) #14	utp11 (ENSSTUG00000043702) #15	FHL3 (ENSSTUG00000043720) #16	rspo1 (ENSSTUG00000043724) #17	ENSSTUG00000043729	gnl2 (ENSSTUG00000043753) #18	dnali1 (ENSSTUG00000043924) #19	SNIP1 (ENSSTUG00000043947) #20	MAP3K6 (ENSSTUG00000043972) #21	MAP7D1 (ENSSTUG00000044228) #22	ENSSTUG00000044325	THRAP3 (ENSSTUG00000044338) #23	sh3d21 (ENSSTUG00000044407) #24	ENSSTUG00000044433	eva1ba (ENSSTUG00000044439) #25	STK40 (ENSSTUG00000044443) #26	OSCP1 (ENSSTUG00000044465) #27	ENSSTUG00000044527	mrps15 (ENSSTUG00000044540) #29	csf3r (ENSSTUG00000044555) #30	GRIK3 (ENSSTUG00000044620) #31	ZC3H12A (ENSSTUG00000045847) #32	INPP5B (ENSSTUG00000045888) #35	mtf1 (ENSSTUG00000046336) #36	yrdc (ENSSTUG00000046359) #37
Oncorhynchus	ANCESTRAL SPECIES	3	ENSGT00530000063881.a.b.s #7	ENSGT01060000248564.a.b.f #8	ENSGT00940000158787.g.a #9	ENSGT00940000159442.d #10	ENSGT01090000260070.C.a.d #11	ENSGT00390000017974.nb.c #12	ENSGT00950000183031.A.a.a.a.a #13	ENSGT00940000165372.c #14	ENSGT00390000005813.i #15	ENSGT00950000183028.a.b.a.e #16	ENSGT00940000158871.c #17	ENSGT00810000125524.c #18	ENSGT00390000003012.l.a #19	ENSGT00940000156553.g #20	ENSGT00940000159398.d #21	ENSGT00950000182941.a.a.b.e.a.b.e #22	ENSGT00940000154063.C.a.a.b.j.a	ENSGT00950000183163.a.a.ab.c #23	ENSGT00940000160627.k #24	ENSGT00990000211290.B	ENSGT00940000154096.b.b.b.b.b.b #25	ENSGT00950000182986.b.d #26	ENSGT00390000004808.e.b #27	ENSGT01030000235168.c.a	ENSGT00390000001737.p #29	ENSGT00940000158915.ab.a #30	ENSGT00940000159465.c.a #31	ENSGT00940000155107.a.a.a.a #32	ENSGT00990000203803.c #34	ENSGT00940000156762.i #35	ENSGT00940000157291.j.b #36
Rainbow trout	MODERN SPECIES	21	pnrc2 (ENSOMYG00000009031) #7	cnr2 (ENSOMYG00000009045) #8	akirin1 (ENSOMYG00000009097) #9	ENSOMYG00000009147 #12	rragca (ENSOMYG00000009167) #13	ENSOMYG00000071645	pou3f1 (ENSOMYG00000009181) #14	utp11 (ENSOMYG00000009193) #15	FHL3 (ENSOMYG00000009234) #16	rspo1 (ENSOMYG00000009271) #17	ENSOMYG00000002892	gnl2 (ENSOMYG00000009355) #18	dnali1 (ENSOMYG00000009575) #19	SNIP1 (ENSOMYG00000009635) #20	ENSOMYG00000009719 #21	MAP7D1 (ENSOMYG00000009849) #22	ENSOMYG00000073482	ENSOMYG00000009890	THRAP3 (ENSOMYG00000009930) #23	sh3d21 (ENSOMYG00000009987) #24	ENSOMYG00000062962	ENSOMYG00000010013	eva1ba (ENSOMYG00000010031) #25	ENSOMYG00000069582	STK40 (ENSOMYG00000010073) #26	OSCP1 (ENSOMYG00000010242) #27	mrps15 (ENSOMYG00000010362) #29	csf3r (ENSOMYG00000010394) #30	GRIK3 (ENSOMYG00000010580) #31	ZC3H12A (ENSOMYG00000011243) #32	ENSOMYG00000011247 #34
Oncorhynchus_a	ANCESTRAL SPECIES	8	ENSGT00530000063881.a.b.s #7	ENSGT01060000248564.a.b.f #8	ENSGT00940000158787.g.a #9	ENSGT00940000159442.c.b #10	ENSGT01090000260070.C.a.d #11	ENSGT00390000017974.nb.c #12	ENSGT00950000183031.A.a.a.a.a #13	ENSGT00940000165372.c #14	ENSGT00390000005813.i #15	ENSGT00950000183028.a.b.a.e #16	ENSGT00940000158871.c #17	ENSGT00810000125524.c #18	ENSGT00390000003012.l.a #19	ENSGT00940000156553.g #20	ENSGT00940000159398.d #21	ENSGT00950000182941.a.a.b.e.a.b.e #22	ENSGT00940000154063.C.a.a.b.j.a	ENSGT00950000183163.a.a.ab.c #23	ENSGT00940000160627.k #24	ENSGT00990000211290.B	ENSGT00940000154096.b.b.b.b.b.b #25	ENSGT00950000182986.b.d #26	ENSGT00390000004808.e.b #27	ENSGT01030000235168.c.a	ENSGT00390000001737.p #29	ENSGT00940000158915.ab.a #30	ENSGT00940000159465.c.a #31	ENSGT00940000155107.a.a.a.a #32	ENSGT00990000203803.c #34	ENSGT00940000156762.i #35	ENSGT00940000157291.j.b #36
Chinook salmon	DUPLICATION
Chinook salmon	DUPLICATION
Chinook salmon	MODERN SPECIES	22	dhdds (ENSOTSG00005005996)	ENSOTSG00005005997	fam110d (ENSOTSG00005006000)	SLC9A1 (ENSOTSG00005006007)	ENSOTSG00005006123	ENSOTSG00005006142	ENSOTSG00005007950	pou3f1 (ENSOTSG00005007951) #14	utp11 (ENSOTSG00005007952) #15	FHL3 (ENSOTSG00005007953) #16	rspo1 (ENSOTSG00005007954) #17	gnl2 (ENSOTSG00005007955) #18	dnali1 (ENSOTSG00005007956) #19	SNIP1 (ENSOTSG00005007957) #20	ENSOTSG00005007960 #21	MAP7D1 (ENSOTSG00005008519) #22	ENSOTSG00005008523	THRAP3 (ENSOTSG00005008526) #23	sh3d21 (ENSOTSG00005008530) #24	eva1ba (ENSOTSG00005008534) #25	STK40 (ENSOTSG00005008536) #26	OSCP1 (ENSOTSG00005008539) #27	ENSOTSG00005008583	mrps15 (ENSOTSG00005008585) #29	csf3r (ENSOTSG00005008586) #30	GRIK3 (ENSOTSG00005008615) #31	ZC3H12A (ENSOTSG00005011535) #32	ENSOTSG00005011536 #34	INPP5B (ENSOTSG00005011544) #35	mtf1 (ENSOTSG00005012824) #36	yrdc (ENSOTSG00005000054) #37
Chinook salmon	MODERN SPECIES	2926								pou3f1 (ENSOTSG00005029284) #14	utp11 (ENSOTSG00005029286) #15	FHL3 (ENSOTSG00005029287) #16	rspo1 (ENSOTSG00005029290) #17	gnl2 (ENSOTSG00005029292) #18	dnali1 (ENSOTSG00005029295) #19	SNIP1 (ENSOTSG00005029299) #20	ENSOTSG00005029304 #21	MAP7D1 (ENSOTSG00005029313) #22	ENSOTSG00005029324	THRAP3 (ENSOTSG00005029326) #23	sh3d21 (ENSOTSG00005029328) #24	eva1ba (ENSOTSG00005029329) #25	STK40 (ENSOTSG00005029330) #26	OSCP1 (ENSOTSG00005029336) #27	mrps15 (ENSOTSG00005029450) #29	ENSOTSG00005029451	csf3r (ENSOTSG00005029452) #30	GRIK3 (ENSOTSG00005029467) #31	ZC3H12A (ENSOTSG00005033079) #32	ENSOTSG00005033081 #34	INPP5B (ENSOTSG00005033083) #35	mtf1 (ENSOTSG00005033088) #36	yrdc (ENSOTSG00005033091) #37
Chinook salmon	MODERN SPECIES	22	WDR26 (ENSOTSG00005002078)	CNIH4 (ENSOTSG00005002066)	ENSOTSG00005002063	CALHM5 (ENSOTSG00005002062)	calhm6 (ENSOTSG00005002060)	klhl32 (ENSOTSG00005002042)	mms22l (ENSOTSG00005002033)	pou3f1 (ENSOTSG00005002026) #14	utp11 (ENSOTSG00005002023) #15	FHL3 (ENSOTSG00005002021) #16	rspo1 (ENSOTSG00005002019) #17	gnl2 (ENSOTSG00005002018) #18	dnali1 (ENSOTSG00005002016) #19	SNIP1 (ENSOTSG00005002012) #20	ENSOTSG00005000717 #21	MAP7D1 (ENSOTSG00005011384) #22	ENSOTSG00005011382	THRAP3 (ENSOTSG00005011377) #23	sh3d21 (ENSOTSG00005011372) #24	eva1ba (ENSOTSG00005011369) #25	STK40 (ENSOTSG00005011356) #26	OSCP1 (ENSOTSG00005011313) #27	ENSOTSG00005011310	mrps15 (ENSOTSG00005011308) #29	csf3r (ENSOTSG00005011303) #30	GRIK3 (ENSOTSG00005007874) #31	ZC3H12A (ENSOTSG00005007864) #32	ENSOTSG00005007863 #34	INPP5B (ENSOTSG00005007623) #35	mtf1 (ENSOTSG00005007615) #36	yrdc (ENSOTSG00005007612) #37
Coho salmon	MODERN SPECIES	11	cnr2 (ENSOKIG00005017757) #8	akirin1 (ENSOKIG00005017768) #9	rhbdl2 (ENSOKIG00005017791) #10	GJA9 (ENSOKIG00005017806) #11	ENSOKIG00005017810 #12	rragca (ENSOKIG00005017823) #13	ENSOKIG00005017835	pou3f1 (ENSOKIG00005017836) #14	utp11 (ENSOKIG00005017841) #15	FHL3 (ENSOKIG00005017877) #16	rspo1 (ENSOKIG00005017887) #17	gnl2 (ENSOKIG00005017905) #18	dnali1 (ENSOKIG00005017939) #19	SNIP1 (ENSOKIG00005017975) #20	ENSOKIG00005018009 #21	MAP7D1 (ENSOKIG00005018595) #22	ENSOKIG00005018600	THRAP3 (ENSOKIG00005018602) #23	sh3d21 (ENSOKIG00005018614) #24	ENSOKIG00005018636	eva1ba (ENSOKIG00005018655) #25	STK40 (ENSOKIG00005018666) #26	OSCP1 (ENSOKIG00005018695) #27	mrps15 (ENSOKIG00005018782) #29	csf3r (ENSOKIG00005018820) #30	GRIK3 (ENSOKIG00005018849) #31	ZC3H12A (ENSOKIG00005018878) #32	ENSOKIG00005018888 #34	INPP5B (ENSOKIG00005018928) #35	mtf1 (ENSOKIG00005019448) #36	yrdc (ENSOKIG00005019460) #37
Salmoninae	ANCESTRAL SPECIES	85	ENSGT00530000063881.a.b.t #7	ENSGT01060000248564.a.b.e #8	ENSGT00940000158787.g.b #9	ENSGT00940000159442.d #10	ENSGT01090000260070.C.a.c #11	ENSGT00390000017974.nb.d #12	ENSGT00950000183031.A.a.a.a.b #13	ENSGT00940000165372.d #14	ENSGT00390000005813.j #15	ENSGT00950000183028.a.b.a.f #16	ENSGT00940000158871.d #17	ENSGT00810000125524.d #18	ENSGT00940000179482	ENSGT00940000156553.h #20	ENSGT00940000159398.c #21	ENSGT00950000182941.a.a.b.e.a.b.f #22	ENSGT00940000154063.C.a.a.b.j.b	ENSGT00950000183163.a.a.ab.d #23	ENSGT00940000160627.l #24	ENSGT00940000154096.b.b.b.b.b.a #25	ENSGT00950000182986.b.c #26	ENSGT00390000004808.e.a #27	ENSGT01030000235168.c.b	ENSGT00390000001737.o #29	ENSGT00940000158915.ab.b #30	ENSGT00940000159465.d #31	ENSGT00940000155107.a.a.a.b #32	ENSGT00990000203803.d #34	ENSGT00940000156762.j #35	ENSGT00940000157291.j.a #36	ENSGT00390000015364.b.n #37
Salmoninae_a	ANCESTRAL SPECIES	39	ENSGT00530000063881.a.b.t #7	ENSGT01060000248564.a.b.e #8	ENSGT00940000158787.g.b #9	ENSGT00940000159442.d #10	ENSGT01090000260070.C.a.c #11	ENSGT00390000017974.nb.d #12	ENSGT00950000183031.A.a.a.a.b #13	ENSGT00940000165372.d #14	ENSGT00390000005813.j #15	ENSGT00950000183028.a.b.a.f #16	ENSGT00940000158871.d #17	ENSGT00810000125524.d #18	ENSGT00940000179482	ENSGT00940000156553.h #20	ENSGT00940000159398.c #21	ENSGT00950000182941.a.a.b.e.a.b.f #22	ENSGT00940000154063.C.a.a.b.j.b	ENSGT00950000183163.a.a.ab.d #23	ENSGT00940000160627.l #24	ENSGT00990000211290.A	ENSGT00940000154096.b.b.b.b.b.a #25	ENSGT00950000182986.b.c #26	ENSGT00390000004808.e.a #27	ENSGT01030000235168.c.b	ENSGT00390000001737.o #29	ENSGT00940000158915.ab.b #30	ENSGT00940000159465.d #31	ENSGT00940000155107.a.a.a.b #32	ENSGT00990000203803.d #34	ENSGT00940000156762.j #35	ENSGT00940000157291.j.a #36
Oncorhynchus	ANCESTRAL SPECIES	38	ENSGT00530000063881.a.b.t #7	ENSGT01060000248564.a.b.e #8	ENSGT00940000158787.g.b #9	ENSGT00940000159442.c.a #10	ENSGT01090000260070.C.a.c #11	ENSGT00390000017974.nb.d #12	ENSGT00950000183031.A.a.a.a.b #13	ENSGT00940000165372.d #14	ENSGT00390000005813.j #15	ENSGT00950000183028.a.b.a.f #16	ENSGT00940000158871.d #17	ENSGT00810000125524.d #18	ENSGT00940000179482	ENSGT00940000156553.h #20	ENSGT00940000159398.c #21	ENSGT00950000182941.a.a.b.e.a.b.f #22	ENSGT00940000154063.C.a.a.b.j.b.d	ENSGT00940000154063.C.a.a.b.j.b.c	ENSGT00950000183163.a.a.ab.d #23	ENSGT00940000160627.l #24	ENSGT00990000211290.A	ENSGT00940000154096.b.b.b.b.b.a #25	ENSGT00950000182986.b.c #26	ENSGT00390000004808.e.a #27	ENSGT01030000235168.c.b	ENSGT00390000001737.o #29	ENSGT00940000158915.ab.b #30	ENSGT00940000159465.d #31	ENSGT00940000155107.a.a.a.b #32	ENSGT00990000203803.d #34	ENSGT00940000156762.j #35
Oncorhynchus_a	ANCESTRAL SPECIES	127								ENSGT00940000165372.d #14	ENSGT00390000005813.j #15	ENSGT00950000183028.a.b.a.f #16	ENSGT00940000158871.d #17	ENSGT00810000125524.d #18	ENSGT00940000179482	ENSGT00940000156553.h #20	ENSGT00940000159398.c #21	ENSGT00950000182941.a.a.b.e.a.b.f #22	ENSGT00940000154063.C.a.a.b.j.b.d	ENSGT00940000154063.C.a.a.b.j.b.c	ENSGT00950000183163.a.a.ab.d #23	ENSGT00940000160627.l #24	ENSGT00990000211290.A	ENSGT00940000154096.b.b.b.b.b.a #25	ENSGT00950000182986.b.c #26	ENSGT00390000004808.e.a #27	ENSGT01030000235168.c.b	ENSGT00390000001737.o #29	ENSGT00940000158915.ab.b #30	ENSGT00940000159465.d #31	ENSGT00940000155107.a.a.a.b #32	ENSGT00990000203803.d #34	ENSGT00940000156762.j #35
Chinook salmon	DUPLICATION
Chinook salmon	MODERN SPECIES	2914	cnr2 (ENSOTSG00005030388) #8	akirin1 (ENSOTSG00005030319) #9	rhbdl2 (ENSOTSG00005030317) #10	GJA9 (ENSOTSG00005030316) #11	ENSOTSG00005030315 #12	rragca (ENSOTSG00005030314) #13	ENSOTSG00005030313	pou3f1 (ENSOTSG00005030312) #14	utp11 (ENSOTSG00005030311) #15	FHL3 (ENSOTSG00005030310) #16	rspo1 (ENSOTSG00005030309) #17	gnl2 (ENSOTSG00005030301) #18	ENSOTSG00005030258	SNIP1 (ENSOTSG00005030257) #20	ENSOTSG00005030207 #21	MAP7D1 (ENSOTSG00005030200) #22	ENSOTSG00005030197	ENSOTSG00005030117	THRAP3 (ENSOTSG00005030112) #23	sh3d21 (ENSOTSG00005030111) #24	ENSOTSG00005030110	eva1ba (ENSOTSG00005030108) #25	STK40 (ENSOTSG00005030106) #26	OSCP1 (ENSOTSG00005030103) #27	ENSOTSG00005030101	mrps15 (ENSOTSG00005030100) #29	ENSOTSG00005030098 #30	GRIK3 (ENSOTSG00005026887) #31	ZC3H12A (ENSOTSG00005026883) #32	ENSOTSG00005026882 #34	INPP5B (ENSOTSG00005026202) #35
Chinook salmon	MODERN SPECIES	15	akirin1 (ENSOTSG00005023721) #9	rhbdl2 (ENSOTSG00005023724) #10	GJA9 (ENSOTSG00005023725) #11	ENSOTSG00005002623	rragca (ENSOTSG00005002634) #13	ENSOTSG00005002863	pou3f1 (ENSOTSG00005003033) #14	utp11 (ENSOTSG00005003113) #15	FHL3 (ENSOTSG00005003210) #16	ENSOTSG00005003212	rspo1 (ENSOTSG00005003214) #17	gnl2 (ENSOTSG00005003221) #18	ENSOTSG00005003337	SNIP1 (ENSOTSG00005003366) #20	ENSOTSG00005003369 #21	MAP7D1 (ENSOTSG00005003383) #22	ENSOTSG00005003397	ENSOTSG00005003401	THRAP3 (ENSOTSG00005003479) #23	sh3d21 (ENSOTSG00005003486) #24	ENSOTSG00005003493	eva1ba (ENSOTSG00005003495) #25	STK40 (ENSOTSG00005003497) #26	OSCP1 (ENSOTSG00005003499) #27	ENSOTSG00005003502	mrps15 (ENSOTSG00005003503) #29	GRIK3 (ENSOTSG00005003513) #31	ZC3H12A (ENSOTSG00005004525) #32	ENSOTSG00005004527 #34	INPP5B (ENSOTSG00005004531) #35	mtf1 (ENSOTSG00005006701) #36
Coho salmon	MODERN SPECIES	4	akirin1 (ENSOKIG00005013285) #9	rhbdl2 (ENSOKIG00005013262) #10	GJA9 (ENSOKIG00005013255) #11	ENSOKIG00005013247 #12	rragca (ENSOKIG00005013221) #13	ENSOKIG00005013216	pou3f1 (ENSOKIG00005013212) #14	utp11 (ENSOKIG00005013205) #15	FHL3 (ENSOKIG00005013194) #16	rspo1 (ENSOKIG00005013187) #17	gnl2 (ENSOKIG00005012985) #18	ENSOKIG00005012932	SNIP1 (ENSOKIG00005012923) #20	MAP3K6 (ENSOKIG00005012344) #21	ENSOKIG00005012292	MAP7D1 (ENSOKIG00005012228) #22	ENSOKIG00005012207	THRAP3 (ENSOKIG00005012188) #23	sh3d21 (ENSOKIG00005012171) #24	ENSOKIG00005012134	eva1ba (ENSOKIG00005012126) #25	STK40 (ENSOKIG00005012106) #26	ENSOKIG00005012100	ENSOKIG00005012097	OSCP1 (ENSOKIG00005012056) #27	ENSOKIG00005012040	mrps15 (ENSOKIG00005012017) #29	ENSOKIG00005011934 #30	GRIK3 (ENSOKIG00005010276) #31	ZC3H12A (ENSOKIG00005010157) #32	ENSOKIG00005010146 #34
Rainbow trout	MODERN SPECIES	11	cnr2 (ENSOMYG00000036009) #8	akirin1 (ENSOMYG00000036028) #9	rhbdl2 (ENSOMYG00000036043) #10	GJA9 (ENSOMYG00000036049) #11	MYCBP (ENSOMYG00000036056) #12	rragca (ENSOMYG00000036070) #13	pou3f1 (ENSOMYG00000036081) #14	utp11 (ENSOMYG00000036096) #15	FHL3 (ENSOMYG00000036105) #16	rspo1 (ENSOMYG00000036112) #17	ENSOMYG00000074317	gnl2 (ENSOMYG00000036245) #18	ENSOMYG00000037484 #20	ENSOMYG00000047915	ENSOMYG00000037595 #21	MAP7D1 (ENSOMYG00000038006) #22	ENSOMYG00000038040	ENSOMYG00000050329	ENSOMYG00000038029	ENSOMYG00000063060	THRAP3 (ENSOMYG00000038051) #23	sh3d21 (ENSOMYG00000038065) #24	eva1ba (ENSOMYG00000055958) #25	STK40 (ENSOMYG00000038106) #26	ENSOMYG00000038134	ENSOMYG00000070784	ENSOMYG00000038157	mrps15 (ENSOMYG00000038191) #29	ENSOMYG00000054305	GRIK3 (ENSOMYG00000027368) #31	ZC3H12A (ENSOMYG00000031296) #32
Salmo	ANCESTRAL SPECIES	1	ENSGT00940000154450.uc.c	ENSGT00530000063881.a.b.t #7	ENSGT01060000248564.a.b.e #8	ENSGT00940000158787.g.b #9	ENSGT00940000159442.d #10	ENSGT01090000260070.C.a.c #11	ENSGT00980000199494.a.b	ENSGT00950000183031.A.a.a.a.b #13	ENSGT00940000165372.d #14	ENSGT00390000005813.j #15	ENSGT00950000183028.a.b.a.f #16	ENSGT00940000158871.d #17	ENSGT00810000125524.d #18	ENSGT00940000156553.h #20	ENSGT00940000159398.c #21	ENSGT00950000182941.a.a.b.e.a.b.f #22	ENSGT00940000154063.C.a.a.b.j.b.b	ENSGT00950000183163.a.a.ab.d #23	ENSGT00940000160627.l #24	ENSGT00990000211290.A	ENSGT00940000154096.b.b.b.b.b.a #25	ENSGT00950000182986.b.c #26	ENSGT00390000004808.e.a #27	ENSGT00390000001737.o #29	ENSGT00940000158915.ab.b #30	ENSGT00940000159465.c.b.b #31	ENSGT00940000155107.a.a.a.b #32	ENSGT00990000203803.d #34	ENSGT00940000156762.j #35	ENSGT00940000157291.j.a #36	ENSGT00990000213494
River trout	MODERN SPECIES	22	SRSF10 (ENSSTUG00000029650)	pnrc2 (ENSSTUG00000029646) #7	cnr2 (ENSSTUG00000029643) #8	akirin1 (ENSSTUG00000029596) #9	rhbdl2 (ENSSTUG00000029559) #10	GJA9 (ENSSTUG00000029550) #11	ENSSTUG00000029536	rragca (ENSSTUG00000029518) #13	pou3f1 (ENSSTUG00000029513) #14	utp11 (ENSSTUG00000029502) #15	FHL3 (ENSSTUG00000029489) #16	rspo1 (ENSSTUG00000029480) #17	gnl2 (ENSSTUG00000029330) #18	SNIP1 (ENSSTUG00000029312) #20	ENSSTUG00000029010 #21	MAP7D1 (ENSSTUG00000028932) #22	ENSSTUG00000028926	fam177a1 (ENSSTUG00000028915)	fam177a1 (ENSSTUG00000028906)	ENSSTUG00000028899	ENSSTUG00000028878	THRAP3 (ENSSTUG00000028821) #23	sh3d21 (ENSSTUG00000028799) #24	eva1ba (ENSSTUG00000028783) #25	STK40 (ENSSTUG00000028762) #26	OSCP1 (ENSSTUG00000028650) #27	mrps15 (ENSSTUG00000028606) #29	ENSSTUG00000010809	GRIK3 (ENSSTUG00000008608) #31	ZC3H12A (ENSSTUG00000008510) #32	ENSSTUG00000008498 #34
Atlantic salmon	MODERN SPECIES	24	pnrc2 (ENSSSAG00000100053) #7	cnr2 (ENSSSAG00000027960) #8	ENSSSAG00000084598	ca108 (ENSSSAG00000042312) #9	rhbdl2 (ENSSSAG00000116091) #10	GJA9 (ENSSSAG00000108800) #11	ENSSSAG00000107037	rragca (ENSSSAG00000042174) #13	utp11 (ENSSSAG00000042064) #15	FHL3 (ENSSSAG00000042046) #16	rspo1 (ENSSSAG00000112303) #17	gnl2 (ENSSSAG00000041915)	dnali1 (ENSSSAG00000041885) #19	ENSSSAG00000041874 #20	ENSSSAG00000041598 #21	MAP7D1 (ENSSSAG00000041522) #22	ENSSSAG00000010394	ENSSSAG00000039686	ENSSSAG00000114956	THRAP3 (ENSSSAG00000039533) #23	sh3d21 (ENSSSAG00000041288) #24	ENSSSAG00000100766	CA078 (ENSSSAG00000039398) #25	STK40 (ENSSSAG00000039079) #26	OSCP1 (ENSSSAG00000038140) #27	mrps15 (ENSSSAG00000037592) #29	csf3r (ENSSSAG00000072535) #30	GRIK3 (ENSSSAG00000070593) #31	ENSSSAG00000091521	ZC3H12A (ENSSSAG00000070519) #32	ENSSSAG00000121662 #34
Huchen	MODERN SPECIES	516								pou3f1 (ENSHHUG00000023677) #14	utp11 (ENSHHUG00000023669) #15	FHL3 (ENSHHUG00000023662) #16	rspo1 (ENSHHUG00000023657) #17	gnl2 (ENSHHUG00000023471) #18	ENSHHUG00000023458	SNIP1 (ENSHHUG00000023456) #20	MAP3K6 (ENSHHUG00000023393) #21	MAP7D1 (ENSHHUG00000023310) #22	ENSHHUG00000023305	THRAP3 (ENSHHUG00000023283) #23	sh3d21 (ENSHHUG00000023275) #24	eva1ba (ENSHHUG00000023251) #25	STK40 (ENSHHUG00000023245) #26	OSCP1 (ENSHHUG00000023235) #27	ENSHHUG00000023196	mrps15 (ENSHHUG00000023165) #29
Northern pike	MODERN SPECIES	19	SRSF10 (ENSELUG00000017108)	pnrc2 (ENSELUG00000017122) #7	cnr2 (ENSELUG00000017144) #8	rhbdl2 (ENSELUG00000017191) #10	GJA9 (ENSELUG00000017242) #11	ENSELUG00000025351 #12	rragca (ENSELUG00000017293) #13	pou3f1 (ENSELUG00000017309) #14	utp11 (ENSELUG00000017361) #15	FHL3 (ENSELUG00000000657) #16	rspo1 (ENSELUG00000017421) #17	gnl2 (ENSELUG00000000675) #18	dnali1 (ENSELUG00000000681) #19	SNIP1 (ENSELUG00000017487) #20	MAP3K6 (ENSELUG00000017546) #21	map7d1a (ENSELUG00000017646) #22	ENSELUG00000000703	ENSELUG00000017676	ENSELUG00000034553	THRAP3 (ENSELUG00000017733) #23	sh3d21 (ENSELUG00000017766) #24	eva1ba (ENSELUG00000017790) #25	STK40 (ENSELUG00000017831) #26	OSCP1 (ENSELUG00000017885) #27	PL8L1 (ENSELUG00000032488)	mrps15 (ENSELUG00000017968) #29	smpdl3b (ENSELUG00000017994)	mecr (ENSELUG00000018018)	LIN28A (ENSELUG00000018033)	MANEAL (ENSELUG00000018058)	yrdc (ENSELUG00000018071) #37
Otomorpha	ANCESTRAL SPECIES	109															ENSGT00940000159398 #21	ENSGT00950000182941.a.a.b.e.a.b #22	ENSGT00950000183163.a.a.ab #23	ENSGT00940000160627 #24	ENSGT00940000154096.b.b.b.b.b #25	ENSGT00950000182986.b #26	ENSGT00390000004808.e #27	ENSGT01030000235168	ENSGT00390000001737 #29	ENSGT00940000158915 #30	ENSGT00940000159465 #31	ENSGT00940000155107.a.a.a #32	ENSGT00990000203803 #34	ENSGT00940000156762 #35	ENSGT00940000157291 #36	ENSGT00390000015364.b #37	ENSGT00390000016054.b.i
Otophysi	ANCESTRAL SPECIES	56	ENSGT00940000157582.g	ENSGT00950000183053.A.a.b	ENSGT00940000157218.A	ENSGT01030000234623.a.a.b.a	ENSGT00990000203824	ENSGT01030000234597.b.a.b.c.b	ENSGT00940000161438	ENSGT00940000157151.c	ENSGT00940000164800	ENSGT00940000164873	ENSGT00390000002144	ENSGT00910000144179.b.b.o.a	ENSGT00530000063624.C.b	ENSGT00940000157999	ENSGT00940000159398 #21	ENSGT00950000182941.a.a.b.e.a.b #22	ENSGT00950000183163.a.a.ab #23	ENSGT00940000160627 #24	ENSGT00940000154096.b.b.b.b.b #25	ENSGT00950000182986.b #26	ENSGT00390000004808.e #27	ENSGT01030000235168	ENSGT00390000001737 #29	ENSGT00940000158915 #30	ENSGT00940000159465 #31	ENSGT00940000155107.a.a.a #32	ENSGT00990000203803 #34	ENSGT00940000156762 #35	ENSGT00940000157291 #36	ENSGT00390000015364.b #37	ENSGT00390000016054.b.i
Characiphysae	ANCESTRAL SPECIES		ENSGT00940000157218.A	ENSGT01030000234623.a.a.b.a	ENSGT00990000203824	ENSGT01030000234597.b.a.b.c.b	ENSGT00940000161438	ENSGT00940000157151.c	ENSGT00940000178073	ENSGT00410000025596.a.b.a	ENSGT00940000164800	ENSGT00940000164873	ENSGT00390000002144	ENSGT00910000144179.b.b.o.a	ENSGT00530000063624.C.b	ENSGT00940000157999	ENSGT00940000159398 #21	ENSGT00950000182941.a.a.b.e.a.b #22	ENSGT00950000183163.a.a.ab #23	ENSGT00940000160627 #24	ENSGT00940000154096.b.b.b.b.b #25	ENSGT00950000182986.b #26	ENSGT00390000004808.e #27	ENSGT01030000235168	ENSGT00390000001737 #29	ENSGT00940000158915 #30	ENSGT00940000159465 #31	ENSGT00940000155107.a.a.a #32	ENSGT00990000203803 #34	ENSGT00940000156762 #35	ENSGT00940000157291 #36	ENSGT00390000015364.b #37	ENSGT00390000016054.b.i
Characiphysae_b	ANCESTRAL SPECIES	2	ENSGT00940000157218.A	ENSGT01030000234623.a.a.b.a	ENSGT00990000203824	ENSGT01030000234597.b.a.b.c.b	ENSGT00940000161438	ENSGT00940000157151.c	ENSGT00940000178073	ENSGT00410000025596.a.b.a	ENSGT00940000164800	ENSGT00940000164873	ENSGT00390000002144	ENSGT00910000144179.b.b.o.a	ENSGT00530000063624.C.b	ENSGT00940000157999	ENSGT00940000159398 #21	ENSGT00950000182941.a.a.b.e.a.b #22	ENSGT00950000183163.a.a.ab #23	ENSGT00940000160627 #24	ENSGT00940000154096.b.b.b.b.b #25	ENSGT00950000182986.b #26	ENSGT00390000004808.e #27	ENSGT01030000235168	ENSGT00390000001737 #29	ENSGT00940000158915 #30	ENSGT00940000159465 #31	ENSGT00940000155107.a.a.a #32	ENSGT00990000203803 #34	ENSGT00940000156762 #35	ENSGT00940000157291 #36	ENSGT00390000015364.b #37	ENSGT00390000016054.b.i
Characoidei	ANCESTRAL SPECIES	7							ENSGT00940000178073	ENSGT00410000025596.a.b.a	ENSGT00940000164800	ENSGT00940000164873	ENSGT00390000002144	ENSGT00910000144179.b.b.o.a	ENSGT00530000063624.C.b	ENSGT00940000157999	ENSGT00940000159398 #21	ENSGT00950000182941.a.a.b.e.a.b #22	ENSGT00950000183163.a.a.ab #23	ENSGT00940000160627 #24	ENSGT00940000154096.b.b.b.b.b #25	ENSGT00950000182986.b #26	ENSGT00390000004808.e #27	ENSGT01030000235168	ENSGT00390000001737 #29	ENSGT00940000158915 #30	ENSGT00940000159465 #31	ENSGT00940000155107.a.a.a #32	ENSGT00990000203803 #34	ENSGT00940000156762 #35	ENSGT00940000157291 #36	ENSGT00390000015364.b #37	ENSGT00390000016054.b.i
Red-bellied piranha	MODERN SPECIES	138										rab42b (ENSPNAG00000014821)	taf12 (ENSPNAG00000003268)	ctps1b (ENSPNAG00000014866)	cited4b (ENSPNAG00000003315)	SCMH1 (ENSPNAG00000014937)	MAP3K6 (ENSPNAG00000004700) #21	map7d1a (ENSPNAG00000003361) #22	THRAP3 (ENSPNAG00000015136) #23	sh3d21 (ENSPNAG00000015238) #24	eva1ba (ENSPNAG00000015261) #25	STK40 (ENSPNAG00000015317) #26	OSCP1 (ENSPNAG00000015372) #27	ENSPNAG00000015385	mrps15 (ENSPNAG00000015400) #29	csf3r (ENSPNAG00000015415) #30	GRIK3 (ENSPNAG00000003389) #31	ZC3H12A (ENSPNAG00000015494) #32	ENSPNAG00000015519 #34	INPP5B (ENSPNAG00000015577) #35	mtf1 (ENSPNAG00000015605) #36	yrdc (ENSPNAG00000015625) #37	MANEAL (ENSPNAG00000015638)
Mexicana tetra	MODERN SPECIES	1	prpf31 (ENSAMXG00000012329)	ENSAMXG00000012311	leng1 (ENSAMXG00000012294)	RSPO2 (ENSAMXG00000037389)	eif3ea (ENSAMXG00000040417)	emc2 (ENSAMXG00000039406)	ENSAMXG00000040414	ENSAMXG00000032787	ENSAMXG00000001945	rab42b (ENSAMXG00000038342)	taf12 (ENSAMXG00000042121)	ctps1b (ENSAMXG00000001913)	ENSAMXG00000034018	scmh1 (ENSAMXG00000036301)	MAP3K6 (ENSAMXG00000001890) #21	map7d1a (ENSAMXG00000001876) #22	THRAP3 (ENSAMXG00000001863) #23	sh3d21 (ENSAMXG00000001850) #24	eva1ba (ENSAMXG00000041799) #25	STK40 (ENSAMXG00000029312) #26	OSCP1 (ENSAMXG00000042434) #27	ENSAMXG00000001798	mrps15 (ENSAMXG00000001781) #29	csf3r (ENSAMXG00000001766) #30	GRIK3 (ENSAMXG00000001749) #31	ENSAMXG00000031100	ENSAMXG00000042004	ZC3H12A (ENSAMXG00000001736) #32	ENSAMXG00000034489 #34	ENSAMXG00000037974	INPP5B (ENSAMXG00000001691) #35
Electric eel	MODERN SPECIES	52	HIVEP3 (ENSEEEG00000006754)	SERINC2 (ENSEEEG00000006747)	ENSEEEG00000006746	ENSEEEG00000006744	paqr7b (ENSEEEG00000006743)	ptprub (ENSEEEG00000006734)	ENSEEEG00000006731	rab42b (ENSEEEG00000006729)	taf12 (ENSEEEG00000006728)	ctps1b (ENSEEEG00000006717)	cited4b (ENSEEEG00000006711)	ENSEEEG00000006710	ENSEEEG00000006709	scmh1 (ENSEEEG00000006708)	MAP3K6 (ENSEEEG00000006701) #21	map7d1a (ENSEEEG00000006695) #22	ENSEEEG00000006694 #23	sh3d21 (ENSEEEG00000006689) #24	eva1ba (ENSEEEG00000006686) #25	nsun5 (ENSEEEG00000006685)	ripk4 (ENSEEEG00000006681)	zgc:110006 (ENSEEEG00000006680)	SUPT20H (ENSEEEG00000006261)	exosc8 (ENSEEEG00000006234)	alg5 (ENSEEEG00000006226)	ENSEEEG00000006222	rfxap (ENSEEEG00000006221)	SERTM1 (ENSEEEG00000006219)	ccna1 (ENSEEEG00000006207)	sparta (ENSEEEG00000006205)	ENSEEEG00000006204
Channel catfish	MODERN SPECIES		cyp4t8 (ENSIPUG00000014649)	Ppp1r8 (ENSIPUG00000014723)	themis2 (ENSIPUG00000014758)	Rpa2 (ENSIPUG00000014790)	smpdl3b (ENSIPUG00000014863)	mecr (ENSIPUG00000014921)	LIN28A (ENSIPUG00000014952)	ENSIPUG00000014960	MANEAL (ENSIPUG00000014973)	yrdc (ENSIPUG00000014985) #37	Mtf1 (ENSIPUG00000015020) #36	inpp5b (ENSIPUG00000015075) #35	ENSIPUG00000015128 #34	Zc3h12a (ENSIPUG00000015158) #32	GRIK3 (ENSIPUG00000015183) #31	map7d1 (ENSIPUG00000015269) #22	THRAP3 (ENSIPUG00000015339) #23	Cd2ap (ENSIPUG00000015399) #24	Eva1b (ENSIPUG00000015458) #25	stk40 (ENSIPUG00000015473) #26	Oscp1 (ENSIPUG00000015510) #27	pl8l1 (ENSIPUG00000015558)	mrps15 (ENSIPUG00000015599) #29	csf3r (ENSIPUG00000015617) #30	ENSIPUG00000015639 #21	SCMH1 (ENSIPUG00000015680)	CITED3 (ENSIPUG00000015725)	ctps1b (ENSIPUG00000015748)	taf12 (ENSIPUG00000015799)	RAB39B (ENSIPUG00000015874)	ENSIPUG00000015908
Cyprinoidei	ANCESTRAL SPECIES	60	ENSGT00940000157218.A	ENSGT01030000234623.a.a.b.a	ENSGT00990000203824	ENSGT01030000234597.b.a.b.c.a	ENSGT01030000234597.b.a.b.c.b	ENSGT00940000161438	ENSGT00940000157151.c	ENSGT00940000164800	ENSGT00940000164873.f	ENSGT00940000164873.e	ENSGT00390000002144	ENSGT00910000144179.b.b.o.a	ENSGT00530000063624.C.b	ENSGT00940000157999	ENSGT00940000159398 #21	ENSGT00950000182941.a.a.b.e.a.b #22	ENSGT00950000183163.a.a.ab #23	ENSGT00940000160627 #24	ENSGT00940000154096.b.b.b.b.b #25	ENSGT00950000182986.b #26	ENSGT00390000004808.e #27	ENSGT01030000235168	ENSGT00390000001737 #29	ENSGT00390000018500.b.b.a	ENSGT00940000155892	ENSGT00940000155619.j.a	ENSGT01030000235403	ENSGT01030000235163	ENSGT00390000016225	ENSGT00940000153801.b	ENSGT00950000183108.b.a.b
Cyprininae	DUPLICATION
Cyprininae	ANCESTRAL SPECIES	28	ENSGT00940000157218.A.b	ENSGT01030000234623.a.a.b.a.e	ENSGT00990000203824.b	ENSGT01030000234597.b.a.b.c.b	ENSGT00940000161438.c	ENSGT00940000157151.c.b	ENSGT00940000164800.c	ENSGT00940000164873.f	ENSGT00390000002144.gb	ENSGT00940000164873.e.a	ENSGT00390000002144.fb.a	ENSGT00910000144179.b.b.o.a.d	ENSGT00530000063624.C.b.h	ENSGT00940000157999.z	ENSGT00940000159398.e #21	ENSGT00950000182941.a.a.b.e.a.b.a #22	ENSGT00950000183163.a.a.ab.b #23	ENSGT00940000160627.i #24	ENSGT00940000154096.b.b.b.b.b.d #25	ENSGT00950000182986.b.a #26	ENSGT00390000004808.e.d #27	ENSGT01030000235168.a	ENSGT00390000001737.r #29	ENSGT00390000018500.b.b.a.b	ENSGT00940000155892.f	ENSGT00940000155619.j.a.c	ENSGT00390000016225.l	ENSGT00940000153801.b.l	ENSGT00950000183108.b.a.b.d	ENSGT00950000182991.A.a.c.a.b.f	ENSGT00390000014242.l.a
Goldfish	MODERN SPECIES	7	akirin1 (ENSCARG00000012946) #9	rhbdl2 (ENSCARG00000012940) #10	GJA9 (ENSCARG00000012937) #11	rragca (ENSCARG00000012929) #13	pou3f1 (ENSCARG00000012924) #14	utp11 (ENSCARG00000012919) #15	FHL3 (ENSCARG00000012912) #16	ptprub (ENSCARG00000009039)	ENSCARG00000008863	rab42b (ENSCARG00000008855)	taf12 (ENSCARG00000008850)	ctps1b (ENSCARG00000008731)	cited4b (ENSCARG00000008702)	SCMH1 (ENSCARG00000008621)	ENSCARG00000007670 #21	map7d1a (ENSCARG00000007511) #22	THRAP3 (ENSCARG00000007470) #23	sh3d21 (ENSCARG00000007452) #24	eva1ba (ENSCARG00000007440) #25	STK40 (ENSCARG00000007427) #26	OSCP1 (ENSCARG00000007397) #27	ENSCARG00000007365	mrps15 (ENSCARG00000007353) #29	sh3bp5b (ENSCARG00000007340)	capn7 (ENSCARG00000007054)	ENSCARG00000006998	PIK3R4 (ENSCARG00000006883)	decr1 (ENSCARG00000006829)	CALB1 (ENSCARG00000006811)	pnp4b (ENSCARG00000006776)	TDP2 (ENSCARG00000006763)
Cyprininae_a	ANCESTRAL SPECIES	7	ENSGT00940000157218.A.b	ENSGT01030000234623.a.a.b.a.e	ENSGT00990000203824.b	ENSGT01030000234597.b.a.b.c.b	ENSGT00940000161438.c	ENSGT00940000157151.c.b	ENSGT00940000164800.c	ENSGT00940000164873.f	ENSGT00390000002144.gb	ENSGT00940000164873.e.a	ENSGT00390000002144.fb.a	ENSGT00910000144179.b.b.o.a.d	ENSGT00530000063624.C.b.h	ENSGT00940000157999.z	ENSGT00940000159398.e #21	ENSGT00950000182941.a.a.b.e.a.b.a #22	ENSGT00950000183163.a.a.ab.b #23	ENSGT00940000160627.i #24	ENSGT00940000154096.b.b.b.b.b.d #25	ENSGT00950000182986.b.a #26	ENSGT00390000004808.e.d #27	ENSGT01030000235168.a	ENSGT00390000001737.r #29	ENSGT00390000018500.b.b.a.b	ENSGT00940000155892.f	ENSGT00940000155619.j.a.c	ENSGT00390000016225.l	ENSGT00940000153801.b.l	ENSGT00950000183108.b.a.b.d	ENSGT00950000182991.A.a.c.a.b.f	ENSGT00390000014242.l.a
Common carp reference	MODERN SPECIES	47	ENSCCRG00000012340	ENSCCRG00000061507	ENSCCRG00000046953	ENSCCRG00000076374	ENSCCRG00000057025	paqr7b (ENSCCRG00000081087)	ptprub (ENSCCRG00000031387)	ENSCCRG00000002646	si:dkey-34d22.2 (ENSCCRG00000046399)	taf12 (ENSCCRG00000058395)	rab42b (ENSCCRG00000073740)	ctps1b (ENSCCRG00000006972)	cited4b (ENSCCRG00000065553)	ENSCCRG00000006980	ENSCCRG00000006540 #21	map7d1a (ENSCCRG00000065527) #22	THRAP3 (ENSCCRG00000051496) #23	sh3d21 (ENSCCRG00000051498) #24	eva1ba (ENSCCRG00000065911) #25	STK40 (ENSCCRG00000015578) #26	OSCP1 (ENSCCRG00000073652) #27	mrps15 (ENSCCRG00000006421) #29	sh3bp5b (ENSCCRG00000006451)	capn7 (ENSCCRG00000005977)	ENSCCRG00000007312	ENSCCRG00000003522	decr1 (ENSCCRG00000078230)	ENSCCRG00000003497	pnp4b (ENSCCRG00000081736)	ENSCCRG00000033400	ENSCCRG00000002659
Golden-line barbel	MODERN SPECIES	103							paqr7b (ENSSGRG00000018604)	ptprub (ENSSGRG00000014465)	ENSSGRG00000014379	rab42b (ENSSGRG00000014377)	taf12 (ENSSGRG00000014368)	ctps1b (ENSSGRG00000013262)	cited4b (ENSSGRG00000013241)	SCMH1 (ENSSGRG00000013239)	MAP3K6 (ENSSGRG00000013042) #21	map7d1a (ENSSGRG00000013019) #22	THRAP3 (ENSSGRG00000013014) #23	ENSSGRG00000013011	sh3d21 (ENSSGRG00000013008) #24	eva1ba (ENSSGRG00000013005) #25	STK40 (ENSSGRG00000012994) #26	OSCP1 (ENSSGRG00000012853) #27	ENSSGRG00000012851	mrps15 (ENSSGRG00000012849) #29	sh3bp5b (ENSSGRG00000012848)	capn7 (ENSSGRG00000012741)	ENSSGRG00000012740	ENSSGRG00000012737	PIK3R4 (ENSSGRG00000011694)	decr1 (ENSSGRG00000011623)	ENSSGRG00000011622
Cyprininae	ANCESTRAL SPECIES	99	ENSGT00940000157582.g.b	ENSGT00950000183053.A.a.b.c	ENSGT00940000157218.A.a	ENSGT01030000234623.a.a.b.a.f	ENSGT00990000203824.a	ENSGT01030000234597.b.a.b.c.a	ENSGT00940000161438.d	ENSGT00940000157151.c.a	ENSGT00940000164800.d	ENSGT00940000164873.e.b	ENSGT00390000002144.fb.b	ENSGT00910000144179.b.b.o.a.c	ENSGT00530000063624.C.b.g	ENSGT00940000157999.`b	ENSGT00940000159398.f #21	ENSGT00950000182941.a.a.b.e.a.b.b #22	ENSGT00950000183163.a.a.ab.a #23	ENSGT00940000160627.j #24	ENSGT00940000154096.b.b.b.b.b.c #25	ENSGT00950000182986.b.b #26	ENSGT00390000004808.e.c #27	ENSGT01030000235168.b	ENSGT00390000001737.q #29	ENSGT00390000018500.b.b.a.a	ENSGT00940000155892.e	ENSGT00940000155619.j.a.d	ENSGT01030000235403	ENSGT01030000235163	ENSGT00390000016225.k	ENSGT00940000153801.b.k.b	ENSGT00940000158130.i.b
Goldfish	MODERN SPECIES	35	trmt11 (ENSCARG00000054211)	ENSCARG00000054317	hint3 (ENSCARG00000054332)	rbms3 (ENSCARG00000054410)	TGFBR2 (ENSCARG00000055298)	ENSCARG00000055375	ENSCARG00000055400	ENSCARG00000055444	rab42b (ENSCARG00000055462)	taf12 (ENSCARG00000055487)	ctps1b (ENSCARG00000055537)	ENSCARG00000055671	cited4b (ENSCARG00000049988)	SCMH1 (ENSCARG00000050008)	MAP3K6 (ENSCARG00000050052) #21	map7d1a (ENSCARG00000050150) #22	ENSCARG00000050384	THRAP3 (ENSCARG00000050399) #23	sh3d21 (ENSCARG00000050454) #24	eva1ba (ENSCARG00000050535) #25	STK40 (ENSCARG00000050551) #26	OSCP1 (ENSCARG00000050573) #27	mrps15 (ENSCARG00000050614) #29	sh3bp5b (ENSCARG00000050652)	capn7 (ENSCARG00000050670)	ENSCARG00000050729	dpy19l1l (ENSCARG00000050759)	SLC4A7 (ENSCARG00000051769)	ANKRD34A (ENSCARG00000054557)	txnipb (ENSCARG00000054570)	ENSCARG00000054580
Cyprininae_a	ANCESTRAL SPECIES	192								ENSGT00940000157151.c.a	ENSGT00940000164800.d	ENSGT00940000164873.e.b	ENSGT00390000002144.fb.b	ENSGT00910000144179.b.b.o.a.c	ENSGT00530000063624.C.b.g	ENSGT00940000157999.`b	ENSGT00940000159398.f #21	ENSGT00950000182941.a.a.b.e.a.b.b #22	ENSGT00950000183163.a.a.ab.a #23	ENSGT00940000160627.j #24	ENSGT00940000154096.b.b.b.b.b.c #25	ENSGT00950000182986.b.b #26	ENSGT00390000004808.e.c #27	ENSGT01030000235168.b	ENSGT00390000001737.q #29	ENSGT00390000018500.b.b.a.a	ENSGT00940000155892.e	ENSGT00940000155619.j.a.d	ENSGT01030000235403	ENSGT01030000235163	ENSGT00390000016225.k	ENSGT00940000153801.b.k.a	ENSGT00950000183108.b.a.b.c
Common carp reference	MODERN SPECIES	2	phactr4b (ENSCCRG00000012094)	ENSCCRG00000005202	ENSCCRG00000012346	ENSCCRG00000012366	ENSCCRG00000065016	stmn1b (ENSCCRG00000010471)	paqr7b (ENSCCRG00000067636)	ptprub (ENSCCRG00000011143)	ENSCCRG00000031270	rab42b (ENSCCRG00000006957)	ctps1b (ENSCCRG00000053678)	ENSCCRG00000054658	cited4b (ENSCCRG00000077681)	ENSCCRG00000080902	ENSCCRG00000007359 #21	map7d1a (ENSCCRG00000006475) #22	THRAP3 (ENSCCRG00000008262) #23	sh3d21 (ENSCCRG00000008250) #24	eva1ba (ENSCCRG00000080956) #25	STK40 (ENSCCRG00000053931) #26	OSCP1 (ENSCCRG00000015603) #27	mrps15 (ENSCCRG00000015732) #29	sh3bp5b (ENSCCRG00000015738)	capn7 (ENSCCRG00000015763)	ENSCCRG00000002746	ENSCCRG00000037667	decr1 (ENSCCRG00000057184)	ENSCCRG00000037627	pnp4b (ENSCCRG00000055203)	ENSCCRG00000002479	ENSCCRG00000053628
Golden-line barbel	MODERN SPECIES	554														SCMH1 (ENSSGRG00000033634)	MAP3K6 (ENSSGRG00000033642) #21	map7d1a (ENSSGRG00000034182) #22	THRAP3 (ENSSGRG00000034193) #23	sh3d21 (ENSSGRG00000034198) #24	eva1ba (ENSSGRG00000034201) #25	STK40 (ENSSGRG00000034202) #26	OSCP1 (ENSSGRG00000034217) #27	OSCP1 (ENSSGRG00000034218) #27	ENSSGRG00000034219	mrps15 (ENSSGRG00000034224) #29	sh3bp5b (ENSSGRG00000034229)	capn7 (ENSSGRG00000034342)	ENSSGRG00000034891	ENSSGRG00000034893	ENSSGRG00000034894	PIK3R4 (ENSSGRG00000034920)	decr1 (ENSSGRG00000036119)
Zebrafish	MODERN SPECIES	7	SERINC2 (ENSDARG00000053425)	ENSDARG00000095152	paqr7b (ENSDARG00000034907)	stmn1b (ENSDARG00000033655)	ptprub (ENSDARG00000101081)	ENSDARG00000103181	si:dkey-34d22.2 (ENSDARG00000100379)	ENSDARG00000101352	ENSDARG00000104865	rab42b (ENSDARG00000101170)	taf12 (ENSDARG00000104030)	ctps1b (ENSDARG00000098386)	cited4b (ENSDARG00000101009)	scmh1 (ENSDARG00000104311)	ENSDARG00000104760 #21	map7d1a (ENSDARG00000098802) #22	THRAP3 (ENSDARG00000101989) #23	sh3d21 (ENSDARG00000099448) #24	eva1ba (ENSDARG00000102701) #25	STK40 (ENSDARG00000098135) #26	OSCP1 (ENSDARG00000101888) #27	mrps15 (ENSDARG00000109289) #29	ENSDARG00000114387	sh3bp5b (ENSDARG00000103978)	capn7 (ENSDARG00000102987)	ENSDARG00000079752	PIK3R4 (ENSDARG00000060469)	decr1 (ENSDARG00000003869)	CALB1 (ENSDARG00000031598)	ENSDARG00000103001	pnp4b (ENSDARG00000029230)
Clupeiformes	ANCESTRAL SPECIES		ENSGT00530000063881.a.b #7	ENSGT01060000248564.a.b #8	ENSGT00940000158787 #9	ENSGT00940000159442 #10	ENSGT01090000260070.C.a #11	ENSGT00950000183031.A.a.a #13	ENSGT00940000165372 #14	ENSGT00390000005813 #15	ENSGT00950000183028.a.b.a #16	ENSGT00390000015257.c	ENSGT00390000003012 #19	ENSGT00810000125524 #18	ENSGT00940000158871 #17	ENSGT00940000156553 #20	ENSGT00940000159398 #21	ENSGT00950000182941.a.a.b.e.a.b #22	ENSGT00950000183163.a.a.ab #23	ENSGT00940000160627 #24	ENSGT00940000154096.b.b.b.b.b #25	ENSGT00950000182986.b #26	ENSGT00390000004808.e #27	ENSGT00390000001737 #29	ENSGT00940000158915 #30	ENSGT00940000159465 #31	ENSGT00940000155107.a.a.a #32	ENSGT00990000203803 #34	ENSGT00940000156762 #35	ENSGT00940000157291 #36	ENSGT00390000015364.b #37	ENSGT00390000016054.b.i	ENSGT00940000153295.a.a
Denticle herring	MODERN SPECIES	15	ENSDCDG00000014733	cyb5r4 (ENSDCDG00000014749)	sim1a (ENSDCDG00000014778)	ASCC3 (ENSDCDG00000014836)	GRIK2 (ENSDCDG00000014913)	ENSDCDG00000016058	ENSDCDG00000016059	HACE1 (ENSDCDG00000016081)	LIN28B (ENSDCDG00000016121)	bves (ENSDCDG00000016159)	popdc3 (ENSDCDG00000016167)	ENSDCDG00000016171	ENSDCDG00000016180	SNIP1 (ENSDCDG00000016195) #20	MAP3K6 (ENSDCDG00000016278) #21	map7d1a (ENSDCDG00000016562) #22	THRAP3 (ENSDCDG00000016601) #23	sh3d21 (ENSDCDG00000016619) #24	eva1ba (ENSDCDG00000016622) #25	STK40 (ENSDCDG00000016626) #26	OSCP1 (ENSDCDG00000016632) #27	mrps15 (ENSDCDG00000016644) #29	csf3r (ENSDCDG00000016649) #30	ENSDCDG00000016659	GRIK3 (ENSDCDG00000016667) #31	ZC3H12A (ENSDCDG00000016680) #32	ENSDCDG00000016681 #34	INPP5B (ENSDCDG00000016709) #35	mtf1 (ENSDCDG00000017280) #36	yrdc (ENSDCDG00000017420) #37	MANEAL (ENSDCDG00000017425)
Atlantic herring	MODERN SPECIES	2	cnr2 (ENSCHAG00000016500) #8	akirin1 (ENSCHAG00000016529) #9	rhbdl2 (ENSCHAG00000016567) #10	pou3f1 (ENSCHAG00000016607) #14	utp11 (ENSCHAG00000016611) #15	FHL3 (ENSCHAG00000016623) #16	MEAF6 (ENSCHAG00000016643)	ENSCHAG00000016660	dnali1 (ENSCHAG00000016663) #19	gnl2 (ENSCHAG00000016691) #18	ENSCHAG00000016810	ENSCHAG00000016824	rspo1 (ENSCHAG00000016833) #17	snip1 (ENSCHAG00000016834)	MAP3K6 (ENSCHAG00000016845) #21	map7d1a (ENSCHAG00000017603) #22	THRAP3 (ENSCHAG00000017660) #23	sh3d21 (ENSCHAG00000017676) #24	eva1ba (ENSCHAG00000017699) #25	STK40 (ENSCHAG00000017718) #26	OSCP1 (ENSCHAG00000017793) #27	mrps15 (ENSCHAG00000017903) #29	ENSCHAG00000017916	ENSCHAG00000017931	csf3r (ENSCHAG00000017945) #30	GRIK3 (ENSCHAG00000018120) #31	ZC3H12A (ENSCHAG00000020414) #32	ENSCHAG00000000349 #34	INPP5B (ENSCHAG00000001030) #35	mtf1 (ENSCHAG00000002640) #36	yrdc (ENSCHAG00000002890) #37
Clupeocephala	DUPLICATION
Clupeocephala	ANCESTRAL SPECIES																	ENSGT00950000182941.a.a.b.e.a.a.a ##22
Otomorpha	ANCESTRAL SPECIES																	ENSGT00950000182941.a.a.b.e.a.a.a ##22
Otophysi	DUPLICATION
Otophysi	ANCESTRAL SPECIES																	ENSGT00950000182941.a.a.b.e.a.a.a.a ##22
Cyprinoidei	ANCESTRAL SPECIES																	ENSGT00950000182941.a.a.b.e.a.a.a.a ##22
Zebrafish	DUPLICATION
Zebrafish	MODERN SPECIES	10	ENSDARG00000103106	TRAPPC9 (ENSDARG00000099118)	rragcb (ENSDARG00000099049) #13	fhl3b (ENSDARG00000104315) ##16	ENSDARG00000100909	ENSDARG00000105241	btr25 (ENSDARG00000102018)	ENSDARG00000102143	ENSDARG00000099509	meaf6 (ENSDARG00000101216)	stpg1 (ENSDARG00000103765)	ENSDARG00000113654	map7d1b (ENSDARG00000104701) ##22	ENSDARG00000101490 ##22	ENSDARG00000103395 ##22	ENSDARG00000102533 ##22	ENSDARG00000089402 ##22	thrap3b (ENSDARG00000098228) ##23	eva1bb (ENSDARG00000100698) ##25	LSM10 (ENSDARG00000101222)	oscp1a (ENSDARG00000104403) ##27	zc3h12ab (ENSDARG00000101034) ##32	ENSDARG00000100046	ENSDARG00000105283	ENSDARG00000102913	ENSDARG00000102992	ENSDARG00000100450	btr18 (ENSDARG00000103618)	ENSDARG00000100539	ENSDARG00000112881	smim13 (ENSDARG00000089204)
Zebrafish	MODERN SPECIES	10	TRAPPC9 (ENSDARG00000099118)	rragcb (ENSDARG00000099049) #13	fhl3b (ENSDARG00000104315) ##16	ENSDARG00000100909	ENSDARG00000105241	btr25 (ENSDARG00000102018)	ENSDARG00000102143	ENSDARG00000099509	meaf6 (ENSDARG00000101216)	stpg1 (ENSDARG00000103765)	ENSDARG00000113654	map7d1b (ENSDARG00000104701) ##22	ENSDARG00000101490 ##22	ENSDARG00000103395 ##22	ENSDARG00000102533 ##22	ENSDARG00000089402 ##22	thrap3b (ENSDARG00000098228) ##23	eva1bb (ENSDARG00000100698) ##25	LSM10 (ENSDARG00000101222)	oscp1a (ENSDARG00000104403) ##27	zc3h12ab (ENSDARG00000101034) ##32	ENSDARG00000100046	ENSDARG00000105283	ENSDARG00000102913	ENSDARG00000102992	ENSDARG00000100450	btr18 (ENSDARG00000103618)	ENSDARG00000100539	ENSDARG00000112881	smim13 (ENSDARG00000089204)	nedd9 (ENSDARG00000089878)
Characiphysae	ANCESTRAL SPECIES																	ENSGT00950000182941.a.a.b.e.a.a.a.a ##22
Characiphysae_b	ANCESTRAL SPECIES																	ENSGT00950000182941.a.a.b.e.a.a.a.a ##22
Characoidei	ANCESTRAL SPECIES																	ENSGT00950000182941.a.a.b.e.a.a.a.a ##22
Mexicana tetra	MODERN SPECIES	6	ddx19a (ENSAMXG00000015325)	ENSAMXG00000034791	VWA5B1 (ENSAMXG00000032840)	CAMK2N1 (ENSAMXG00000032815)	mul1b (ENSAMXG00000036074)	fam43b (ENSAMXG00000024828)	ENSAMXG00000008981	ENSAMXG00000042708	cdaa (ENSAMXG00000034539)	pink1 (ENSAMXG00000038123)	agmat (ENSAMXG00000030343)	DNAJC16 (ENSAMXG00000018083)	iyd (ENSAMXG00000030031)	selenoi (ENSAMXG00000042381)	ppp1r14c (ENSAMXG00000037953)	ENSAMXG00000041374 ##22	ENSAMXG00000025984	ENSAMXG00000038595	cyp17a2 (ENSAMXG00000043927)	egr4 (ENSAMXG00000030340)	ENSAMXG00000034155	DCLK2 (ENSAMXG00000040052)	ENSAMXG00000036777	FHIP1A (ENSAMXG00000004939)	ENSAMXG00000004935	ENSAMXG00000043047	cptp (ENSAMXG00000004933)	ints11 (ENSAMXG00000038758)	ENSAMXG00000041584	ACAP3 (ENSAMXG00000004927)	ube2j2 (ENSAMXG00000004921)
Otophysi	ANCESTRAL SPECIES																	ENSGT00950000182941.a.a.b.e.a.a.a.b ##22
Cyprinoidei	ANCESTRAL SPECIES																	ENSGT00950000182941.a.a.b.e.a.a.a.b ##22
Zebrafish	DUPLICATION
Zebrafish	MODERN SPECIES	10	kcnk9 (ENSDARG00000104563)	ENSDARG00000103106	TRAPPC9 (ENSDARG00000099118)	rragcb (ENSDARG00000099049) #13	fhl3b (ENSDARG00000104315) ##16	ENSDARG00000100909	ENSDARG00000105241	btr25 (ENSDARG00000102018)	ENSDARG00000102143	ENSDARG00000099509	meaf6 (ENSDARG00000101216)	stpg1 (ENSDARG00000103765)	ENSDARG00000113654	map7d1b (ENSDARG00000104701) ##22	ENSDARG00000101490 ##22	ENSDARG00000103395 ##22	ENSDARG00000102533 ##22	ENSDARG00000089402 ##22	thrap3b (ENSDARG00000098228) ##23	eva1bb (ENSDARG00000100698) ##25	LSM10 (ENSDARG00000101222)	oscp1a (ENSDARG00000104403) ##27	zc3h12ab (ENSDARG00000101034) ##32	ENSDARG00000100046	ENSDARG00000105283	ENSDARG00000102913	ENSDARG00000102992	ENSDARG00000100450	btr18 (ENSDARG00000103618)	ENSDARG00000100539	ENSDARG00000112881
Zebrafish	MODERN SPECIES	10	ENSDARG00000079654	kcnk9 (ENSDARG00000104563)	ENSDARG00000103106	TRAPPC9 (ENSDARG00000099118)	rragcb (ENSDARG00000099049) #13	fhl3b (ENSDARG00000104315) ##16	ENSDARG00000100909	ENSDARG00000105241	btr25 (ENSDARG00000102018)	ENSDARG00000102143	ENSDARG00000099509	meaf6 (ENSDARG00000101216)	stpg1 (ENSDARG00000103765)	ENSDARG00000113654	map7d1b (ENSDARG00000104701) ##22	ENSDARG00000101490 ##22	ENSDARG00000103395 ##22	ENSDARG00000102533 ##22	ENSDARG00000089402 ##22	thrap3b (ENSDARG00000098228) ##23	eva1bb (ENSDARG00000100698) ##25	LSM10 (ENSDARG00000101222)	oscp1a (ENSDARG00000104403) ##27	zc3h12ab (ENSDARG00000101034) ##32	ENSDARG00000100046	ENSDARG00000105283	ENSDARG00000102913	ENSDARG00000102992	ENSDARG00000100450	btr18 (ENSDARG00000103618)	ENSDARG00000100539
Euteleosteomorpha	ANCESTRAL SPECIES																	ENSGT00950000182941.a.a.b.e.a.a.a ##22
Acanthomorphata	ANCESTRAL SPECIES																	ENSGT00950000182941.a.a.b.e.a.a.a ##22
Cod	MODERN SPECIES	18	ENSGMOG00000025618	ENSGMOG00000027948	gja10a (ENSGMOG00000002098) ##11	ENSGMOG00000029715	ENSGMOG00000030418	ENSGMOG00000036440	ENSGMOG00000001776	ENSGMOG00000031697	ENSGMOG00000029140	ENSGMOG00000028769	ENSGMOG00000030873	ENSGMOG00000019348	ENSGMOG00000027382	ENSGMOG00000029480	ENSGMOG00000019382	ENSGMOG00000029632 ##22	ENSGMOG00000033270	ahi1 (ENSGMOG00000019402)	slc18b1 (ENSGMOG00000028735)	slc18b1 (ENSGMOG00000030233)	slc18b1 (ENSGMOG00000019410)	ENSGMOG00000019415	ENSGMOG00000023735	ENSGMOG00000019433	rmnd1 (ENSGMOG00000019502)	ENSGMOG00000033787	stx11a (ENSGMOG00000034568)	fbxo30a (ENSGMOG00000025323)	ENSGMOG00000026983	ENSGMOG00000016082	ENSGMOG00000034655
Clupeocephala	ANCESTRAL SPECIES																	ENSGT00950000182941.a.a.b.e.a.a.b ##22
Euteleosteomorpha	ANCESTRAL SPECIES																	ENSGT00950000182941.a.a.b.e.a.a.b ##22
Acanthomorphata	ANCESTRAL SPECIES																	ENSGT00950000182941.a.a.b.e.a.a.b ##22
Cod	MODERN SPECIES	19	ENSGMOG00000025532	ENSGMOG00000022940	ENSGMOG00000033659	ENSGMOG00000029166	ENSGMOG00000028407	etfb (ENSGMOG00000009792)	ENSGMOG00000023830	ENSGMOG00000031015	iglon5 (ENSGMOG00000030867)	ENSGMOG00000024736	ENSGMOG00000023507	ENSGMOG00000019418	ago1 (ENSGMOG00000019413)	dhdds (ENSGMOG00000001113)	ENSGMOG00000025369	MAP7D1 (ENSGMOG00000024856) ##22	ENSGMOG00000035895 #23	ENSGMOG00000006557 #24	eva1ba (ENSGMOG00000033967) #25	hint3 (ENSGMOG00000006588)	ENSGMOG00000034923	trmt11 (ENSGMOG00000006618)	RNF146 (ENSGMOG00000035264)	tent5ba (ENSGMOG00000019728)	zdhhc18a (ENSGMOG00000001179)	pigv (ENSGMOG00000001161)	ARID1A (ENSGMOG00000001024)	gpn2 (ENSGMOG00000001010)	GPATCH3 (ENSGMOG00000000991)	nr0b2a (ENSGMOG00000000984)	ENSGMOG00000024982