Neopterygii	ANCESTRAL SPECIES	56															ENSGT00940000159398 #21	ENSGT00950000182941.a.a.b #22	ENSGT00950000183163.a.a #23	ENSGT00940000160627 #24	ENSGT00940000154096.b.b.b.b.b #25	ENSGT00950000182986.b #26	ENSGT00510000048364	ENSGT00390000004808 #27	ENSGT00940000171263	ENSGT00510000047886.b	ENSGT00950000183199.a.b	ENSGT00940000163576	ENSGT00940000161202	ENSGT01050000244848.B.b	ENSGT01050000244848.B.a.b	ENSGT00940000160262	ENSGT00940000162179.e.a.b
Osteoglossocephalai	DUPLICATION
Osteoglossocephalai	DUPLICATION
Osteoglossocephalai	ANCESTRAL SPECIES	4												ENSGT00940000166920	ENSGT00390000003012 #19	ENSGT00940000156553 #20	ENSGT00940000159398 #21	ENSGT00950000182941.a.a.b.e.a #22	ENSGT00950000183163.a.a.ab #23	ENSGT00940000160627 #24	ENSGT00940000154096.b.b.b.b.b #25	ENSGT00950000182986.b #26	ENSGT00390000004808.e #27	ENSGT01030000235168	ENSGT00390000001737 #29	ENSGT00940000158915 #30	ENSGT00940000159465 #31	ENSGT00940000155107.a.a #32	ENSGT00990000203803 #34	ENSGT00810000125524 #18	ENSGT00940000158871 #17	ENSGT00950000183028.a.b.a #16	ENSGT00390000005813 #15
Clupeocephala	DUPLICATION
Clupeocephala	ANCESTRAL SPECIES		ENSGT01060000248564.a.b #8	ENSGT00940000158787 #9	ENSGT00940000159442 #10	ENSGT01030000235133	ENSGT01090000260070.C.a #11	ENSGT00390000017974.nb #12	ENSGT00950000183031.A.a.a #13	ENSGT00940000165372 #14	ENSGT00390000005813 #15	ENSGT00950000183028.a.b.a #16	ENSGT00940000158871 #17	ENSGT00810000125524 #18	ENSGT00390000003012 #19	ENSGT00940000156553 #20	ENSGT00940000159398 #21	ENSGT00950000182941.a.a.b.e.a.b #22	ENSGT00950000183163.a.a.ab #23	ENSGT00940000160627 #24	ENSGT00940000154096.b.b.b.b.b #25	ENSGT00950000182986.b #26	ENSGT00390000004808.e #27	ENSGT00390000001737 #29	ENSGT00940000158915 #30	ENSGT00940000159465 #31	ENSGT00940000155107.a.a.a #32	ENSGT00990000203803 #34	ENSGT00940000156762 #35	ENSGT00940000157291 #36	ENSGT00390000015364.b #37	ENSGT00390000016054.b.i	ENSGT00940000153295.a.a
Euteleosteomorpha	ANCESTRAL SPECIES	13	ENSGT01060000248564.a.b #8	ENSGT00940000158787 #9	ENSGT00940000159442 #10	ENSGT01030000235133	ENSGT01090000260070.C.a #11	ENSGT00390000017974.nb #12	ENSGT00950000183031.A.a.a #13	ENSGT00940000165372 #14	ENSGT00390000005813 #15	ENSGT00950000183028.a.b.a #16	ENSGT00940000158871 #17	ENSGT00810000125524 #18	ENSGT00390000003012 #19	ENSGT00940000156553 #20	ENSGT00940000159398 #21	ENSGT00950000182941.a.a.b.e.a.b #22	ENSGT00950000183163.a.a.ab #23	ENSGT00940000160627 #24	ENSGT00940000154096.b.b.b.b.b #25	ENSGT00950000182986.b #26	ENSGT00390000004808.e #27	ENSGT01030000235168	ENSGT00390000001737 #29	ENSGT00940000158915 #30	ENSGT00940000159465 #31	ENSGT00940000155107.a.a.a #32	ENSGT00990000203803 #34	ENSGT00940000156762 #35	ENSGT00940000157291 #36	ENSGT00390000015364.b #37	ENSGT00390000016054.b.i
Acanthomorphata	ANCESTRAL SPECIES	38	ENSGT00530000063881.a.b #7	ENSGT01060000248564.a.b #8	ENSGT00940000158787 #9	ENSGT00940000159442 #10	ENSGT01090000260070.C.a #11	ENSGT00390000017974.nb #12	ENSGT00950000183031.A.a.a #13	ENSGT00940000165372 #14	ENSGT00390000005813 #15	ENSGT00950000183028.a.b.a #16	ENSGT00940000158871 #17	ENSGT00810000125524 #18	ENSGT00390000003012 #19	ENSGT00940000156553 #20	ENSGT00940000159398 #21	ENSGT00950000182941.a.a.b.e.a.b #22	ENSGT00950000183163.a.a.ab #23	ENSGT00940000160627 #24	ENSGT00940000154096.b.b.b.b.b #25	ENSGT00950000182986.b #26	ENSGT00390000004808.e #27	ENSGT01100000263479.H.c.b	ENSGT01100000263479.H.c.a.a	ENSGT01100000263479.G	ENSGT00950000183199.a.b	ENSGT00940000177028	ENSGT00940000163576	ENSGT00940000161202	ENSGT00390000001737 #29	ENSGT00940000158915 #30	ENSGT00940000159465 #31
Euacanthomorphacea	ANCESTRAL SPECIES		ENSGT00530000063881.a.b #7	ENSGT01060000248564.a.b #8	ENSGT00940000158787 #9	ENSGT00940000159442 #10	ENSGT01090000260070.C.a #11	ENSGT00390000017974.nb #12	ENSGT00950000183031.A.a.a #13	ENSGT00940000165372 #14	ENSGT00390000005813 #15	ENSGT00950000183028.a.b.a #16	ENSGT00940000158871 #17	ENSGT00810000125524 #18	ENSGT00390000003012 #19	ENSGT00940000156553 #20	ENSGT00940000159398 #21	ENSGT00950000182941.a.a.b.e.a.b #22	ENSGT00950000183163.a.a.ab #23	ENSGT00940000160627 #24	ENSGT00940000154096.b.b.b.b.b #25	ENSGT00950000182986.b #26	ENSGT00390000004808.e #27	ENSGT00940000166129 #28	ENSGT00390000001737 #29	ENSGT00940000158915 #30	ENSGT00940000159465 #31	ENSGT00940000155107.a.a.a #32	ENSGT00990000203803 #34	ENSGT00940000156762 #35	ENSGT00940000157291 #36	ENSGT00390000015364.b #37	ENSGT00390000016054.b.i
Percomorphaceae	ANCESTRAL SPECIES		ENSGT00530000063881.a.b #7	ENSGT01060000248564.a.b #8	ENSGT00940000158787 #9	ENSGT00940000159442 #10	ENSGT01090000260070.C.a #11	ENSGT00390000017974.nb #12	ENSGT00950000183031.A.a.a #13	ENSGT00940000165372 #14	ENSGT00390000005813 #15	ENSGT00950000183028.a.b.a #16	ENSGT00940000158871 #17	ENSGT00810000125524 #18	ENSGT00390000003012 #19	ENSGT00940000156553 #20	ENSGT00940000159398 #21	ENSGT00950000182941.a.a.b.e.a.b #22	ENSGT00950000183163.a.a.ab #23	ENSGT00940000160627 #24	ENSGT00940000154096.b.b.b.b.b #25	ENSGT00950000182986.b #26	ENSGT00390000004808.e #27	ENSGT00940000166129 #28	ENSGT00390000001737 #29	ENSGT00940000158915 #30	ENSGT00940000159465 #31	ENSGT00940000155107.a.a.a #32	ENSGT00990000203803 #34	ENSGT00940000156762 #35	ENSGT00940000157291 #36	ENSGT00390000015364.b #37	ENSGT00390000016054.b.i
Percomorphaceae_B	ANCESTRAL SPECIES	1	ENSGT00530000063881.a.b #7	ENSGT01060000248564.a.b #8	ENSGT00940000158787 #9	ENSGT00940000159442 #10	ENSGT01090000260070.C.a #11	ENSGT00390000017974.nb #12	ENSGT00950000183031.A.a.a #13	ENSGT00940000165372 #14	ENSGT00390000005813 #15	ENSGT00950000183028.a.b.a #16	ENSGT00940000158871 #17	ENSGT00810000125524 #18	ENSGT00390000003012 #19	ENSGT00940000156553 #20	ENSGT00940000159398 #21	ENSGT00950000182941.a.a.b.e.a.b #22	ENSGT00950000183163.a.a.ab #23	ENSGT00940000160627 #24	ENSGT00940000154096.b.b.b.b.b #25	ENSGT00950000182986.b #26	ENSGT00390000004808.e #27	ENSGT00940000166129 #28	ENSGT00390000001737 #29	ENSGT00940000158915 #30	ENSGT00530000068429	ENSGT00940000159465 #31	ENSGT00940000155107.a.a.a #32	ENSGT00990000204035 #33	ENSGT00940000156762 #35	ENSGT00940000157291 #36	ENSGT00390000015364.b #37
Percomorphaceae_C	ANCESTRAL SPECIES	2	ENSGT00530000063881.a.b #7	ENSGT01060000248564.a.b #8	ENSGT00940000158787 #9	ENSGT00940000159442 #10	ENSGT01090000260070.C.a #11	ENSGT00390000017974.nb #12	ENSGT00950000183031.A.a.a #13	ENSGT00940000165372 #14	ENSGT00390000005813 #15	ENSGT00950000183028.a.b.a #16	ENSGT00940000158871 #17	ENSGT00810000125524 #18	ENSGT00390000003012 #19	ENSGT00940000156553 #20	ENSGT00940000159398 #21	ENSGT00950000182941.a.a.b.e.a.b #22	ENSGT00950000183163.a.a.ab #23	ENSGT00940000160627 #24	ENSGT00940000154096.b.b.b.b.b #25	ENSGT00950000182986.b #26	ENSGT00390000004808.e #27	ENSGT00940000166129 #28	ENSGT00390000001737 #29	ENSGT00940000158915 #30	ENSGT00530000068429	ENSGT00940000159465 #31	ENSGT00940000155107.a.a.a #32	ENSGT00990000204035 #33	ENSGT00940000156762 #35	ENSGT00940000157291 #36	ENSGT00390000015364.b #37
Percomorphaceae_D	ANCESTRAL SPECIES	2	ENSGT00530000063881.a.b #7	ENSGT01060000248564.a.b #8	ENSGT00940000158787 #9	ENSGT00940000159442 #10	ENSGT01090000260070.C.a #11	ENSGT00390000017974.nb #12	ENSGT00950000183031.A.a.a #13	ENSGT00940000165372 #14	ENSGT00390000005813 #15	ENSGT00950000183028.a.b.a #16	ENSGT00940000158871 #17	ENSGT00810000125524 #18	ENSGT00390000003012 #19	ENSGT00940000156553 #20	ENSGT00940000159398 #21	ENSGT00950000182941.a.a.b.e.a.b #22	ENSGT00950000183163.a.a.ab #23	ENSGT00940000160627 #24	ENSGT00940000154096.b.b.b.b.b #25	ENSGT00950000182986.b #26	ENSGT00390000004808.e #27	ENSGT00940000166129 #28	ENSGT00390000001737 #29	ENSGT00940000158915 #30	ENSGT00940000159465 #31	ENSGT00940000155107.a.a.a #32	ENSGT00990000204035 #33	ENSGT00990000203803 #34	ENSGT00940000156762 #35	ENSGT00940000157291 #36	ENSGT00390000015364.b #37
Anabantaria	ANCESTRAL SPECIES	2	ENSGT00940000160519.a.a	ENSGT00530000063881.a.b #7	ENSGT01060000248564.a.b #8	ENSGT00940000158787 #9	ENSGT00940000159442 #10	ENSGT01090000260070.C.a #11	ENSGT00390000017974.nb #12	ENSGT00940000165372 #14	ENSGT00390000005813 #15	ENSGT00950000183028.a.b.a #16	ENSGT00940000158871 #17	ENSGT00810000125524 #18	ENSGT00390000003012 #19	ENSGT00940000156553 #20	ENSGT00940000159398 #21	ENSGT00950000182941.a.a.b.e.a.b #22	ENSGT00950000183163.a.a.ab #23	ENSGT00940000160627 #24	ENSGT00940000154096.b.b.b.b.b #25	ENSGT00950000182986.b #26	ENSGT00390000004808.e #27	ENSGT00940000166129 #28	ENSGT00390000001737 #29	ENSGT00940000158915.u #30	ENSGT00940000159465 #31	ENSGT00940000155107.a.a.a #32	ENSGT00990000204035 #33	ENSGT00940000156762 #35	ENSGT00940000157291 #36	ENSGT00390000015364.b #37	ENSGT00390000016054.b.i
Anabantoidei	ANCESTRAL SPECIES	3	ENSGT00940000160519.a.a	ENSGT00530000063881.a.b #7	ENSGT01060000248564.a.b #8	ENSGT00940000158787 #9	ENSGT00940000159442 #10	ENSGT01090000260070.C.a #11	ENSGT00390000017974.nb #12	ENSGT00950000183031.A.a.a #13	ENSGT00390000005813 #15	ENSGT00950000183028.a.b.a #16	ENSGT00940000158871 #17	ENSGT00810000125524 #18	ENSGT00390000003012 #19	ENSGT00940000156553 #20	ENSGT00940000159398 #21	ENSGT00950000182941.a.a.b.e.a.b #22	ENSGT00950000183163.a.a.ab #23	ENSGT00940000160627 #24	ENSGT00940000154096.b.b.b.b.b #25	ENSGT00950000182986.b #26	ENSGT00390000004808.e #27	ENSGT00940000166129 #28	ENSGT00390000001737 #29	ENSGT00940000158915.u #30	ENSGT00940000159465 #31	ENSGT00940000155107.a.a.a #32	ENSGT00990000204035 #33	ENSGT00940000156762 #35	ENSGT00940000157291 #36	ENSGT00390000015364.b #37	ENSGT00390000016054.b.i
Siamese fighting fish	MODERN SPECIES	7	SRSF10 (ENSBSLG00000020961)	pnrc2 (ENSBSLG00000020985) #7	cnr2 (ENSBSLG00000021011) #8	akirin1 (ENSBSLG00000021034) #9	rhbdl2 (ENSBSLG00000021070) #10	GJA9 (ENSBSLG00000021090) #11	MYCBP (ENSBSLG00000021126) #12	rragca (ENSBSLG00000021174) #13	utp11 (ENSBSLG00000021215) #15	FHL3 (ENSBSLG00000021242) #16	rspo1 (ENSBSLG00000021269) #17	gnl2 (ENSBSLG00000021296) #18	dnali1 (ENSBSLG00000021397) #19	SNIP1 (ENSBSLG00000021403) #20	ENSBSLG00000021441 #21	MAP7D1 (ENSBSLG00000021885) #22	THRAP3 (ENSBSLG00000021912) #23	sh3d21 (ENSBSLG00000021927) #24	eva1ba (ENSBSLG00000021956) #25	STK40 (ENSBSLG00000021978) #26	OSCP1 (ENSBSLG00000022030) #27	ENSBSLG00000022016	mrps15 (ENSBSLG00000022038) #29	csf3r (ENSBSLG00000022045) #30	GRIK3 (ENSBSLG00000022127) #31	ENSBSLG00000022266	ZC3H12A (ENSBSLG00000022267) #32	ENSBSLG00000022271 #33	INPP5B (ENSBSLG00000022431) #35	mtf1 (ENSBSLG00000022933) #36	yrdc (ENSBSLG00000022987) #37
Zig-zag eel	MODERN SPECIES	7	ENSMAMG00000008128	ENSMAMG00000008111	pnrc2 (ENSMAMG00000008081) #7	cnr2 (ENSMAMG00000008073) #8	akirin1 (ENSMAMG00000008054) #9	rhbdl2 (ENSMAMG00000026530) #10	ENSMAMG00000008023 #12	rragca (ENSMAMG00000007964) #13	pou3f1 (ENSMAMG00000007950) #14	utp11 (ENSMAMG00000007927) #15	FHL3 (ENSMAMG00000007894) #16	rspo1 (ENSMAMG00000007882) #17	gnl2 (ENSMAMG00000007823) #18	dnali1 (ENSMAMG00000027064) #19	ENSMAMG00000007781 #21	MAP7D1 (ENSMAMG00000007741) #22	THRAP3 (ENSMAMG00000007707) #23	sh3d21 (ENSMAMG00000007666) #24	eva1ba (ENSMAMG00000007649) #25	STK40 (ENSMAMG00000007611) #26	OSCP1 (ENSMAMG00000007603) #27	ENSMAMG00000007593	mrps15 (ENSMAMG00000007572) #29	csf3r (ENSMAMG00000007544) #30	GRIK3 (ENSMAMG00000007505) #31	ZC3H12A (ENSMAMG00000007494) #32	INPP5B (ENSMAMG00000007345) #35	mtf1 (ENSMAMG00000007324) #36	yrdc (ENSMAMG00000028078) #37	MANEAL (ENSMAMG00000007300)	ENSMAMG00000007271
Carangaria	ANCESTRAL SPECIES	1	ENSGT00530000063881.a.b #7	ENSGT01060000248564.a.b #8	ENSGT00940000158787 #9	ENSGT00940000159442 #10	ENSGT01090000260070.C.a #11	ENSGT00390000017974.nb #12	ENSGT00950000183031.A.a.a #13	ENSGT00940000165372 #14	ENSGT00390000005813 #15	ENSGT00950000183028.a.b.a #16	ENSGT00940000158871 #17	ENSGT00810000125524 #18	ENSGT00390000003012 #19	ENSGT00940000156553 #20	ENSGT00940000159398 #21	ENSGT00950000182941.a.a.b.e.a.b #22	ENSGT00950000183163.a.a.ab #23	ENSGT00940000160627 #24	ENSGT00940000154096.b.b.b.b.b #25	ENSGT00950000182986.b #26	ENSGT00390000004808.e #27	ENSGT00940000166129 #28	ENSGT00390000001737 #29	ENSGT00940000158915 #30	ENSGT00940000159465 #31	ENSGT00940000155107.a.a.a #32	ENSGT00990000203803 #34	ENSGT00940000156762 #35	ENSGT00940000157291 #36	ENSGT00390000015364.b #37	ENSGT00390000016054.b.i
Carangaria_A	ANCESTRAL SPECIES	27	ENSGT00530000063881.a.b #7	ENSGT01060000248564.a.b #8	ENSGT00940000158787 #9	ENSGT00940000159442 #10	ENSGT01090000260070.C.a #11	ENSGT00390000017974.nb #12	ENSGT00950000183031.A.a.a #13	ENSGT00940000165372 #14	ENSGT00390000005813 #15	ENSGT00950000183028.a.b.a #16	ENSGT00940000158871 #17	ENSGT00810000125524 #18	ENSGT00390000003012 #19	ENSGT00940000156553 #20	ENSGT00940000159398 #21	ENSGT00950000182941.a.a.b.e.a.b #22	ENSGT00950000183163.a.a.ab #23	ENSGT00940000160627 #24	ENSGT00940000154096.b.b.b.b.b #25	ENSGT00950000182986.b #26	ENSGT00390000004808.e #27	ENSGT00940000166129 #28	ENSGT00390000001737 #29	ENSGT00940000158915 #30	ENSGT00940000159465 #31	ENSGT00940000155107.a.a.a #32	ENSGT00990000203803 #34	ENSGT00940000156762 #35	ENSGT00940000157291 #36	ENSGT00390000015364.b #37	ENSGT00390000016054.b.i
Barramundi perch	MODERN SPECIES	104	pnrc2 (ENSLCAG00010003408) #7	cnr2 (ENSLCAG00010003413) #8	akirin1 (ENSLCAG00010003420) #9	rhbdl2 (ENSLCAG00010003426) #10	GJA9 (ENSLCAG00010003430) #11	ENSLCAG00010003436 #12	rragca (ENSLCAG00010003445) #13	pou3f1 (ENSLCAG00010003450) #14	utp11 (ENSLCAG00010003455) #15	FHL3 (ENSLCAG00010003463) #16	rspo1 (ENSLCAG00010003470) #17	gnl2 (ENSLCAG00010003490) #18	dnali1 (ENSLCAG00010003510) #19	snip1 (ENSLCAG00010003515)	ENSLCAG00010003538 #21	MAP7D1 (ENSLCAG00010003586) #22	THRAP3 (ENSLCAG00010003595) #23	sh3d21 (ENSLCAG00010003598) #24	eva1ba (ENSLCAG00010003602) #25	STK40 (ENSLCAG00010003605) #26	OSCP1 (ENSLCAG00010003615) #27	ENSLCAG00010003627 #28	mrps15 (ENSLCAG00010003634) #29	CSF3R (ENSLCAG00010003642) #30
Seriola	ANCESTRAL SPECIES	48	ENSGT00530000063881.a.b #7	ENSGT01060000248564.a.b #8	ENSGT00940000158787 #9	ENSGT00940000159442 #10	ENSGT01090000260070.C.a #11	ENSGT00390000017974.nb #12	ENSGT00950000183031.A.a.a #13	ENSGT00940000165372 #14	ENSGT00390000005813 #15	ENSGT00950000183028.a.b.a #16	ENSGT00940000158871 #17	ENSGT00810000125524 #18	ENSGT00390000003012 #19	ENSGT00940000156553 #20	ENSGT00940000159398 #21	ENSGT00950000182941.a.a.b.e.a.b #22	ENSGT00950000183163.a.a.ab #23	ENSGT00940000160627 #24	ENSGT00940000154096.b.b.b.b.b #25	ENSGT00950000182986.b #26	ENSGT00390000004808.e #27	ENSGT00940000166129 #28	ENSGT00390000001737 #29	ENSGT00940000158915 #30	ENSGT00940000159465 #31	ENSGT00940000155107.a.a.a #32	ENSGT00990000203803 #34	ENSGT00940000156762 #35	ENSGT00940000157291 #36	ENSGT00390000015364.b #37	ENSGT00390000016054.b.i
Greater amberjack	MODERN SPECIES	154	pnrc2 (ENSSDUG00000010643) #7	cnr2 (ENSSDUG00000010638) #8	akirin1 (ENSSDUG00000010616) #9	rhbdl2 (ENSSDUG00000010587) #10	GJA9 (ENSSDUG00000010578) #11	ENSSDUG00000010570 #12	rragca (ENSSDUG00000010543) #13	pou3f1 (ENSSDUG00000010532) #14	utp11 (ENSSDUG00000010501) #15	FHL3 (ENSSDUG00000010483) #16	rspo1 (ENSSDUG00000010472) #17	gnl2 (ENSSDUG00000010382) #18	dnali1 (ENSSDUG00000010345) #19	SNIP1 (ENSSDUG00000010325) #20	MAP3K6 (ENSSDUG00000010287) #21	MAP7D1 (ENSSDUG00000010208) #22	THRAP3 (ENSSDUG00000010132) #23	sh3d21 (ENSSDUG00000010098) #24	eva1ba (ENSSDUG00000010078) #25	STK40 (ENSSDUG00000010024) #26	OSCP1 (ENSSDUG00000009984) #27	ENSSDUG00000009969 #28	mrps15 (ENSSDUG00000009946) #29	csf3r (ENSSDUG00000009924) #30	GRIK3 (ENSSDUG00000009891) #31	ZC3H12A (ENSSDUG00000009879) #32	ENSSDUG00000009859 #34	INPP5B (ENSSDUG00000009812) #35	mtf1 (ENSSDUG00000009784) #36	yrdc (ENSSDUG00000009775) #37	MANEAL (ENSSDUG00000009753)
Pleuronectoidei	ANCESTRAL SPECIES	3	ENSGT00940000154450.uc	ENSGT00530000063881.a.b #7	ENSGT01060000248564.a.b #8	ENSGT00940000158787 #9	ENSGT00940000159442 #10	ENSGT01090000260070.C.a #11	ENSGT00390000017974.nb #12	ENSGT00940000165372 #14	ENSGT00390000005813 #15	ENSGT00950000183028.a.b.a #16	ENSGT00940000158871 #17	ENSGT00810000125524 #18	ENSGT00390000003012 #19	ENSGT00940000156553 #20	ENSGT00940000159398 #21	ENSGT00950000182941.a.a.b.e.a.b #22	ENSGT00950000183163.a.a.ab #23	ENSGT00940000160627 #24	ENSGT00940000154096.b.b.b.b.b #25	ENSGT00950000182986.b #26	ENSGT00390000004808.e #27	ENSGT01030000235168	ENSGT00390000001737 #29	ENSGT00940000158915 #30	ENSGT00940000159465 #31	ENSGT00940000155107.a.a.a #32	ENSGT00940000178211	ENSGT00940000156762 #35	ENSGT00940000157291 #36	ENSGT00390000015364.b #37	ENSGT00390000016054.b.i
Tongue sole	MODERN SPECIES	4	pnrc2 (ENSCSEG00000020261) #7	cnr2 (ENSCSEG00000020263) #8	akirin1 (ENSCSEG00000020264) #9	rhbdl2 (ENSCSEG00000020266) #10	GJA9 (ENSCSEG00000020269) #11	ENSCSEG00000020270	rragca (ENSCSEG00000020277) #13	pou3f1 (ENSCSEG00000020279) #14	utp11 (ENSCSEG00000020281) #15	FHL3 (ENSCSEG00000020285) #16	rspo1 (ENSCSEG00000020287) #17	gnl2 (ENSCSEG00000020296) #18	dnali1 (ENSCSEG00000020307) #19	snip1 (ENSCSEG00000020310)	ENSCSEG00000020313 #21	MAP7D1 (ENSCSEG00000020319) #22	ENSCSEG00000020325 #23	sh3d21 (ENSCSEG00000020331) #24	ENSCSEG00000020336	ENSCSEG00000020343	selenbp1 (ENSCSEG00000020362)	pogzb (ENSCSEG00000020370)	ENSCSEG00000020374	plekho1b (ENSCSEG00000020399)	ENSCSEG00000020402	ENSCSEG00000020409	ENSCSEG00000020416	ENSCSEG00000020420	iqgap3 (ENSCSEG00000020426)	ANKRD34A (ENSCSEG00000020436)	gon4lb (ENSCSEG00000020441)
Turbot	MODERN SPECIES		cnr2 (ENSSMAG00000003186) #8	akirin1 (ENSSMAG00000003202) #9	rhbdl2 (ENSSMAG00000003252) #10	GJA9 (ENSSMAG00000003266) #11	ENSSMAG00000003287 #12	rragca (ENSSMAG00000003327) #13	pou3f1 (ENSSMAG00000003341) #14	ENSSMAG00000035984	utp11 (ENSSMAG00000003346) #15	FHL3 (ENSSMAG00000027104) #16	rspo1 (ENSSMAG00000003444) #17	gnl2 (ENSSMAG00000003472) #18	dnali1 (ENSSMAG00000003563) #19	SNIP1 (ENSSMAG00000003570) #20	ENSSMAG00000003583 #21	MAP7D1 (ENSSMAG00000003648) #22	THRAP3 (ENSSMAG00000003703) #23	sh3d21 (ENSSMAG00000003747) #24	eva1ba (ENSSMAG00000023907) #25	STK40 (ENSSMAG00000003802) #26	OSCP1 (ENSSMAG00000003827) #27	ENSSMAG00000003843	mrps15 (ENSSMAG00000003899) #29	csf3r (ENSSMAG00000003925) #30	GRIK3 (ENSSMAG00000005100) #31	ZC3H12A (ENSSMAG00000005140) #32	INPP5B (ENSSMAG00000005147) #35	mtf1 (ENSSMAG00000005172) #36	yrdc (ENSSMAG00000005195) #37	MANEAL (ENSSMAG00000005209)	ENSSMAG00000005221
Eupercaria	ANCESTRAL SPECIES	1	ENSGT01060000248564.a.b #8	ENSGT00940000158787 #9	ENSGT00940000159442 #10	ENSGT01030000235133	ENSGT01090000260070.C.a #11	ENSGT00390000017974.nb #12	ENSGT00950000183031.A.a.a #13	ENSGT00940000165372 #14	ENSGT00390000005813 #15	ENSGT00950000183028.a.b.a #16	ENSGT00940000158871 #17	ENSGT00810000125524 #18	ENSGT00390000003012 #19	ENSGT00940000156553 #20	ENSGT00940000159398 #21	ENSGT00950000182941.a.a.b.e.a.b #22	ENSGT00950000183163.a.a.ab #23	ENSGT00940000160627 #24	ENSGT00940000154096.b.b.b.b.b #25	ENSGT00950000182986.b #26	ENSGT00390000004808.e #27	ENSGT00940000166129 #28	ENSGT00390000001737 #29	ENSGT00940000158915 #30	ENSGT00530000068429	ENSGT00940000159465 #31	ENSGT00940000155107.a.a.a #32	ENSGT00990000204035 #33	ENSGT00940000156762 #35	ENSGT00940000157291 #36	ENSGT00390000015364.b #37
Tetraodontidae	ANCESTRAL SPECIES	49	ENSGT00940000164147.a	ENSGT00530000063881.a.b #7	ENSGT01060000248564.a.b #8	ENSGT00940000158787 #9	ENSGT00940000159442 #10	ENSGT01090000260070.C.a #11	ENSGT00390000017974.nb #12	ENSGT00950000183031.A.a.a #13	ENSGT00940000165372 #14	ENSGT00390000005813 #15	ENSGT00950000183028.a.b.a #16	ENSGT00940000158871 #17	ENSGT00810000125524 #18	ENSGT00390000003012.x.a #19	ENSGT00940000159398 #21	ENSGT00950000182941.a.a.b.e.a.b #22	ENSGT00950000183163.a.a.ab #23	ENSGT00940000160627 #24	ENSGT00940000154096.b.b.b.b.b #25	ENSGT00950000182986.b #26	ENSGT00390000004808.e #27	ENSGT00940000166129 #28	ENSGT00390000001737 #29	ENSGT00940000158915 #30	ENSGT00940000159465 #31
Fugu	MODERN SPECIES	19	fabp10a (ENSTRUG00000019589)	pnrc2 (ENSTRUG00000022856) #7	cnr2 (ENSTRUG00000008915) #8	akirin1 (ENSTRUG00000024601) #9	rhbdl2 (ENSTRUG00000009100) #10	GJA9 (ENSTRUG00000033096) #11	ENSTRUG00000020122 #12	rragca (ENSTRUG00000009237) #13	pou3f1 (ENSTRUG00000009356) #14	utp11 (ENSTRUG00000009375) #15	FHL3 (ENSTRUG00000009493) #16	rspo1 (ENSTRUG00000009686) #17	gnl2 (ENSTRUG00000009789) #18	dnali1 (ENSTRUG00000010122) #19	ENSTRUG00000010218 #21	MAP7D1 (ENSTRUG00000010556) #22	THRAP3 (ENSTRUG00000010702) #23	sh3d21 (ENSTRUG00000010927) #24	eva1ba (ENSTRUG00000010950) #25	STK40 (ENSTRUG00000010973) #26	OSCP1 (ENSTRUG00000011056) #27	ENSTRUG00000021423 #28	mrps15 (ENSTRUG00000011129) #29	CSF3R (ENSTRUG00000011157) #30	GRIK3 (ENSTRUG00000011437) #31	ENSTRUG00000027138	pbx2 (ENSTRUG00000011925)	dnase2 (ENSTRUG00000012127)	rgl2 (ENSTRUG00000012178)	ENSTRUG00000021243	SYNGAP1 (ENSTRUG00000012329)
Tetraodon	MODERN SPECIES	26	ENSTNIG00000014963	rad51c (ENSTNIG00000014964)	ENSTNIG00000014965	ENSTNIG00000002273	XPO1 (ENSTNIG00000003360)	cct4 (ENSTNIG00000003361)	pus10 (ENSTNIG00000003362)	ENSTNIG00000005303	ENSTNIG00000000317	ENSTNIG00000005304	ENSTNIG00000005305	ENSTNIG00000003614	abcd1 (ENSTNIG00000006189)	gnl2 (ENSTNIG00000003733) #18	dnali1 (ENSTNIG00000003732) #19	ENSTNIG00000012195 #22	THRAP3 (ENSTNIG00000012194) #23	sh3d21 (ENSTNIG00000012193) #24	STK40 (ENSTNIG00000012192) #26	OSCP1 (ENSTNIG00000012191) #27	mrps15 (ENSTNIG00000012190) #29	CSF3R (ENSTNIG00000001409) #30	GRIK3 (ENSTNIG00000012189) #31	PIEZO1 (ENSTNIG00000003588)	ENSTNIG00000003589	ENSTNIG00000003590	ENSTNIG00000003591	ENSTNIG00000003592	tm9sf2 (ENSTNIG00000003593)	SYNGAP1 (ENSTNIG00000010304)	smg5 (ENSTNIG00000010303)
Eupecaria_A	ANCESTRAL SPECIES	2	ENSGT01060000248564.a.b #8	ENSGT00940000158787 #9	ENSGT00940000159442 #10	ENSGT01030000235133	ENSGT01090000260070.C.a #11	ENSGT00390000017974.nb #12	ENSGT00950000183031.A.a.a #13	ENSGT00940000165372 #14	ENSGT00390000005813 #15	ENSGT00950000183028.a.b.a #16	ENSGT00940000158871 #17	ENSGT00810000125524 #18	ENSGT00390000003012 #19	ENSGT00940000156553 #20	ENSGT00940000159398 #21	ENSGT00950000182941.a.a.b.e.a.b #22	ENSGT00950000183163.a.a.ab #23	ENSGT00940000160627 #24	ENSGT00940000154096.b.b.b.b.b #25	ENSGT00950000182986.b #26	ENSGT00390000004808.e #27	ENSGT00940000166129 #28	ENSGT00390000001737 #29	ENSGT00940000158915 #30	ENSGT00530000068429	ENSGT00940000159465 #31	ENSGT00940000155107.a.a.a #32	ENSGT00990000204035 #33	ENSGT00940000156762 #35	ENSGT00940000157291 #36	ENSGT00390000015364.b #37
Ballan wrasse	MODERN SPECIES	58	akirin1 (ENSLBEG00000008199) #9	rhbdl2 (ENSLBEG00000008248) #10	ENSLBEG00000008283	GJA9 (ENSLBEG00000008301) #11	ENSLBEG00000008336	rragca (ENSLBEG00000008360) #13	pou3f1 (ENSLBEG00000008388) #14	utp11 (ENSLBEG00000008407) #15	FHL3 (ENSLBEG00000008447) #16	rspo1 (ENSLBEG00000008477) #17	gnl2 (ENSLBEG00000008518) #18	dnali1 (ENSLBEG00000008589) #19	ENSLBEG00000008632	ENSLBEG00000008644 #21	ENSLBEG00000008678 #21	MAP7D1 (ENSLBEG00000008723) #22	THRAP3 (ENSLBEG00000008813) #23	sh3d21 (ENSLBEG00000008879) #24	eva1ba (ENSLBEG00000008911) #25	ENSLBEG00000008935	STK40 (ENSLBEG00000008958) #26	OSCP1 (ENSLBEG00000009007) #27	ENSLBEG00000009056 #28	mrps15 (ENSLBEG00000009087) #29	CSF3R (ENSLBEG00000009161) #30	GRIK3 (ENSLBEG00000009256) #31
Eupecaria_B	ANCESTRAL SPECIES	4	ENSGT00530000063881.a.b #7	ENSGT01060000248564.a.b #8	ENSGT00940000158787 #9	ENSGT00940000159442 #10	ENSGT01090000260070.C.a #11	ENSGT00390000017974.nb #12	ENSGT00950000183031.A.a.a #13	ENSGT00940000165372 #14	ENSGT00390000005813 #15	ENSGT00950000183028.a.b.a #16	ENSGT00940000158871 #17	ENSGT00810000125524 #18	ENSGT00390000003012 #19	ENSGT00940000156553 #20	ENSGT00940000159398 #21	ENSGT00950000182941.a.a.b.e.a.b #22	ENSGT00950000183163.a.a.ab #23	ENSGT00940000160627 #24	ENSGT00940000154096.b.b.b.b.b #25	ENSGT00950000182986.b #26	ENSGT00390000004808.e #27	ENSGT00940000166129 #28	ENSGT00390000001737 #29	ENSGT00940000158915 #30	ENSGT00530000068429	ENSGT00940000159465 #31	ENSGT00940000155107.a.a.a #32	ENSGT00990000204035 #33	ENSGT00940000156762 #35	ENSGT00940000157291 #36	ENSGT00390000015364.b #37
Eupecaria_C	ANCESTRAL SPECIES	2	ENSGT00940000154450.uc	ENSGT00530000063881.a.b #7	ENSGT01060000248564.a.b #8	ENSGT00940000158787 #9	ENSGT00940000159442 #10	ENSGT01090000260070.C.a #11	ENSGT00390000017974.nb #12	ENSGT00950000183031.A.a.a #13	ENSGT00940000165372 #14	ENSGT00390000005813 #15	ENSGT00950000183028.a.b.a #16	ENSGT00940000158871 #17	ENSGT00810000125524 #18	ENSGT00390000003012 #19	ENSGT00940000159398 #21	ENSGT00950000182941.a.a.b.e.a.b #22	ENSGT00950000183163.a.a.ab #23	ENSGT00940000160627 #24	ENSGT00940000154096.b.b.b.b.b #25	ENSGT00950000182986.b #26	ENSGT00390000004808.e #27	ENSGT00940000166129 #28	ENSGT00390000001737 #29	ENSGT00940000158915 #30	ENSGT00940000159465 #31	ENSGT00940000155107.a.a.a #32	ENSGT00990000204035 #33	ENSGT00940000156762 #35	ENSGT00940000157291 #36	ENSGT00390000015364.b #37	ENSGT00390000016054.b.i
Gilthead seabream	MODERN SPECIES	8	pnrc2 (ENSSAUG00010015052) #7	cnr2 (ENSSAUG00010015051) #8	akirin1 (ENSSAUG00010015045) #9	rhbdl2 (ENSSAUG00010015042) #10	GJA9 (ENSSAUG00010015040) #11	ENSSAUG00010015039 #12	rragca (ENSSAUG00010015034) #13	pou3f1 (ENSSAUG00010015032) #14	utp11 (ENSSAUG00010015030) #15	FHL3 (ENSSAUG00010015024) #16	rspo1 (ENSSAUG00010015022) #17	gnl2 (ENSSAUG00010015013) #18	dnali1 (ENSSAUG00010015007) #19	snip1 (ENSSAUG00010015005)	MAP3K6 (ENSSAUG00010020734) #21	MAP7D1 (ENSSAUG00010020726) #22	THRAP3 (ENSSAUG00010020723) #23	sh3d21 (ENSSAUG00010020721) #24	eva1ba (ENSSAUG00010020720) #25	STK40 (ENSSAUG00010020718) #26	OSCP1 (ENSSAUG00010020717) #27	ENSSAUG00010020716 #28	mrps15 (ENSSAUG00010020715) #29	csf3r (ENSSAUG00010020713) #30	GRIK3 (ENSSAUG00010017988) #31	ZC3H12A (ENSSAUG00010017948) #32	ENSSAUG00010017943 #33	INPP5B (ENSSAUG00010017637) #35	mtf1 (ENSSAUG00010017599) #36	yrdc (ENSSAUG00010017597) #37	MANEAL (ENSSAUG00010017595)
Eupercaria_incertae_sedis	ANCESTRAL SPECIES	2	ENSGT00940000164147.a	ENSGT00940000154450.uc	ENSGT00530000063881.a.b #7	ENSGT01060000248564.a.b #8	ENSGT00940000158787 #9	ENSGT00940000159442 #10	ENSGT01090000260070.C.a #11	ENSGT00390000017974.nb #12	ENSGT00940000165372 #14	ENSGT00390000005813 #15	ENSGT00950000183028.a.b.a #16	ENSGT00940000158871 #17	ENSGT00810000125524 #18	ENSGT00390000003012 #19	ENSGT00940000159398 #21	ENSGT00950000182941.a.a.b.e.a.b #22	ENSGT00950000183163.a.a.ab #23	ENSGT00940000160627 #24	ENSGT00940000154096.b.b.b.b.b #25	ENSGT00950000182986.b #26	ENSGT00390000004808.e #27	ENSGT00390000001737 #29	ENSGT00940000158915 #30	ENSGT00940000159465 #31	ENSGT00940000155107.a.a.a #32	ENSGT00990000204035 #33	ENSGT00940000156762 #35	ENSGT00940000157291 #36	ENSGT00390000015364.b #37	ENSGT00390000016054.b.i	ENSGT00940000153295.a.a
European seabass	MODERN SPECIES	6	pnrc2 (ENSDLAG00005027869) #7	ENSDLAG00005007393	SRSF10 (ENSDLAG00005029184)	cnr2 (ENSDLAG00005033223) #8	rhbdl2 (ENSDLAG00005007466) #10	GJA9 (ENSDLAG00005007475) #11	ENSDLAG00005029266 #12	rragca (ENSDLAG00005007481) #13	pou3f1 (ENSDLAG00005029296) #14	utp11 (ENSDLAG00005007490) #15	FHL3 (ENSDLAG00005007500) #16	rspo1 (ENSDLAG00005007510) #17	gnl2 (ENSDLAG00005007540) #18	dnali1 (ENSDLAG00005034656) #19	ENSDLAG00005008475 #21	MAP7D1 (ENSDLAG00005009499) #22	THRAP3 (ENSDLAG00005009555) #23	sh3d21 (ENSDLAG00005009583) #24	eva1ba (ENSDLAG00005029823) #25	STK40 (ENSDLAG00005009633) #26	OSCP1 (ENSDLAG00005009654) #27	mrps15 (ENSDLAG00005030986) #29	csf3r (ENSDLAG00005009735) #30	GRIK3 (ENSDLAG00005009845) #31	ZC3H12A (ENSDLAG00005011869) #32	ENSDLAG00005032500 #33	INPP5B (ENSDLAG00005011892) #35	mtf1 (ENSDLAG00005012917) #36	MANEAL (ENSDLAG00005027752)	yrdc (ENSDLAG00005013053) #37	ENSDLAG00005034052
Large yellow croaker	MODERN SPECIES	484	scn1ba (ENSLCRG00005010222)	ENSLCRG00005010153	si:ch211-225p5.8 (ENSLCRG00005010109)	KCNE1 (ENSLCRG00005010097)	dnajc28 (ENSLCRG00005010096)	ENSLCRG00005010093	rragca (ENSLCRG00005010089) #13	pou3f1 (ENSLCRG00005010081) #14	utp11 (ENSLCRG00005010070) #15	FHL3 (ENSLCRG00005010057) #16	rspo1 (ENSLCRG00005010051) #17	gnl2 (ENSLCRG00005010011) #18	dnali1 (ENSLCRG00005009982) #19	snip1 (ENSLCRG00005009965)	ENSLCRG00005006336 #21	MAP7D1 (ENSLCRG00005005931) #22	THRAP3 (ENSLCRG00005005916) #23	sh3d21 (ENSLCRG00005005906) #24	eva1ba (ENSLCRG00005005900) #25	STK40 (ENSLCRG00005005869) #26	OSCP1 (ENSLCRG00005005741) #27	ENSLCRG00005005712	mrps15 (ENSLCRG00005005702) #29	csf3r (ENSLCRG00005005672) #30	GRIK3 (ENSLCRG00005005377) #31	ZC3H12A (ENSLCRG00005005327) #32	ENSLCRG00005005318 #33	INPP5B (ENSLCRG00005003620) #35	mtf1 (ENSLCRG00005003083) #36	yrdc (ENSLCRG00005002976) #37	MANEAL (ENSLCRG00005012059)
Perciformes	ANCESTRAL SPECIES	3	ENSGT00530000063881.a.b #7	ENSGT01060000248564.a.b #8	ENSGT00940000158787 #9	ENSGT00940000159442 #10	ENSGT01090000260070.C.a #11	ENSGT00390000017974.nb #12	ENSGT00950000183031.A.a.a #13	ENSGT00940000165372 #14	ENSGT00390000005813 #15	ENSGT00950000183028.a.b.a #16	ENSGT00940000158871 #17	ENSGT00810000125524 #18	ENSGT00390000003012 #19	ENSGT00940000156553 #20	ENSGT00940000159398 #21	ENSGT00950000182941.a.a.b.e.a.b #22	ENSGT00950000183163.a.a.ab #23	ENSGT00940000160627 #24	ENSGT00940000154096.b.b.b.b.b #25	ENSGT00950000182986.b #26	ENSGT00390000004808.e #27	ENSGT00940000166129 #28	ENSGT00390000001737 #29	ENSGT00940000158915 #30	ENSGT00530000068429	ENSGT00940000159465 #31	ENSGT00940000155107.a.a.a #32	ENSGT00990000204035 #33	ENSGT00940000156762 #35	ENSGT00940000157291 #36	ENSGT00390000015364.b #37
Perciformes_a	ANCESTRAL SPECIES	3	ENSGT00940000154450.uc	ENSGT00530000063881.a.b #7	ENSGT01060000248564.a.b #8	ENSGT00940000158787 #9	ENSGT00940000159442 #10	ENSGT01090000260070.C.a #11	ENSGT00390000017974.nb #12	ENSGT00940000165372 #14	ENSGT00390000005813 #15	ENSGT00950000183028.a.b.a #16	ENSGT00940000158871 #17	ENSGT00810000125524 #18	ENSGT00390000003012 #19	ENSGT00940000156553 #20	ENSGT00940000159398 #21	ENSGT00950000182941.a.a.b.e.a.b #22	ENSGT00950000183163.a.a.ab #23	ENSGT00940000160627 #24	ENSGT00940000154096.b.b.b.b.b #25	ENSGT00950000182986.b #26	ENSGT00390000004808.e #27	ENSGT00940000166129 #28	ENSGT00390000001737 #29	ENSGT00940000158915 #30	ENSGT00940000159465 #31	ENSGT00940000155107.a.a.a #32	ENSGT00940000156762 #35	ENSGT00940000157291 #36	ENSGT00390000015364.b #37	ENSGT00390000016054.b.i	ENSGT00940000153295.a.a
Pike perch	MODERN SPECIES	116													dnali1 (ENSSLUG00000005235) #19	snip1 (ENSSLUG00000005225)	MAP3K6 (ENSSLUG00000003332) #21	MAP7D1 (ENSSLUG00000002922) #22	THRAP3 (ENSSLUG00000002906) #23	sh3d21 (ENSSLUG00000002896) #24	eva1ba (ENSSLUG00000002889) #25	STK40 (ENSSLUG00000002877) #26	OSCP1 (ENSSLUG00000002865) #27	ENSSLUG00000002857 #28	mrps15 (ENSSLUG00000023350) #29	csf3r (ENSSLUG00000023341) #30	GRIK3 (ENSSLUG00000023219) #31	ENSSLUG00000023196	ZC3H12A (ENSSLUG00000023191) #32	ENSSLUG00000023188	INPP5B (ENSSLUG00000021701) #35	mtf1 (ENSSLUG00000021588) #36	yrdc (ENSSLUG00000021583) #37
Cottioidei	ANCESTRAL SPECIES	7	ENSGT00940000154450.uc	ENSGT00530000063881.a.b #7	ENSGT01060000248564.a.b #8	ENSGT00940000158787 #9	ENSGT00940000159442 #10	ENSGT01090000260070.C.a #11	ENSGT00390000017974.nb #12	ENSGT00950000183031.A.a.a #13	ENSGT00940000165372 #14	ENSGT00390000005813 #15	ENSGT00950000183028.a.b.a #16	ENSGT00940000158871 #17	ENSGT00810000125524 #18	ENSGT00390000003012 #19	ENSGT00940000159398 #21	ENSGT00950000182941.a.a.b.e.a.b #22	ENSGT00950000183163.a.a.ab #23	ENSGT00940000160627 #24	ENSGT00940000154096.b.b.b.b.b #25	ENSGT00950000182986.b #26	ENSGT00390000004808.e #27	ENSGT00940000166129 #28	ENSGT00390000001737 #29	ENSGT00940000158915 #30	ENSGT00530000068429	ENSGT00940000159465 #31	ENSGT00940000155107.a.a.a #32	ENSGT00990000204035 #33	ENSGT00940000156762 #35	ENSGT00940000157291 #36	ENSGT00390000015364.b #37
Stickleback	DUPLICATION
Stickleback	MODERN SPECIES	19	pnrc2 (ENSGACG00000013653) #7	cnr2 (ENSGACG00000013656) #8	akirin1 (ENSGACG00000013657) #9	rhbdl2 (ENSGACG00000013668) #10	GJA9 (ENSGACG00000013675) #11	ENSGACG00000013676 #12	rragca (ENSGACG00000013678) #13	pou3f1 (ENSGACG00000013679) #14	utp11 (ENSGACG00000013680) #15	FHL3 (ENSGACG00000013685) #16	rspo1 (ENSGACG00000013691) #17	gnl2 (ENSGACG00000013692) #18	dnali1 (ENSGACG00000013717) #19	snip1 (ENSGACG00000013718)	MAP3K6 (ENSGACG00000013722) #21	ENSGACG00000013737 #22	ENSGACG00000013740 #22	THRAP3 (ENSGACG00000013745) #23	sh3d21 (ENSGACG00000013749) #24	eva1ba (ENSGACG00000013751) #25	STK40 (ENSGACG00000013752) #26	OSCP1 (ENSGACG00000013774) #27	mrps15 (ENSGACG00000013792) #29	csf3r (ENSGACG00000013795) #30	ENSGACG00000013798	GRIK3 (ENSGACG00000013802) #31	ZC3H12A (ENSGACG00000013859) #32	ENSGACG00000013863 #33	INPP5B (ENSGACG00000013866) #35	mtf1 (ENSGACG00000013875) #36	yrdc (ENSGACG00000013878) #37
Stickleback	MODERN SPECIES	19	cnr2 (ENSGACG00000013656) #8	akirin1 (ENSGACG00000013657) #9	rhbdl2 (ENSGACG00000013668) #10	GJA9 (ENSGACG00000013675) #11	ENSGACG00000013676 #12	rragca (ENSGACG00000013678) #13	pou3f1 (ENSGACG00000013679) #14	utp11 (ENSGACG00000013680) #15	FHL3 (ENSGACG00000013685) #16	rspo1 (ENSGACG00000013691) #17	gnl2 (ENSGACG00000013692) #18	dnali1 (ENSGACG00000013717) #19	snip1 (ENSGACG00000013718)	MAP3K6 (ENSGACG00000013722) #21	ENSGACG00000013737 #22	ENSGACG00000013740 #22	THRAP3 (ENSGACG00000013745) #23	sh3d21 (ENSGACG00000013749) #24	eva1ba (ENSGACG00000013751) #25	STK40 (ENSGACG00000013752) #26	OSCP1 (ENSGACG00000013774) #27	mrps15 (ENSGACG00000013792) #29	csf3r (ENSGACG00000013795) #30	ENSGACG00000013798	GRIK3 (ENSGACG00000013802) #31	ZC3H12A (ENSGACG00000013859) #32	ENSGACG00000013863 #33	INPP5B (ENSGACG00000013866) #35	mtf1 (ENSGACG00000013875) #36	yrdc (ENSGACG00000013878) #37	ENSGACG00000013885
Lumpfish	MODERN SPECIES	7	pnrc2 (ENSCLMG00005009430) #7	cnr2 (ENSCLMG00005009429) #8	akirin1 (ENSCLMG00005009427) #9	rhbdl2 (ENSCLMG00005009374) #10	GJA9 (ENSCLMG00005009373) #11	ENSCLMG00005009372 #12	rragca (ENSCLMG00005009371) #13	pou3f1 (ENSCLMG00005009370) #14	utp11 (ENSCLMG00005009369) #15	FHL3 (ENSCLMG00005009368) #16	rspo1 (ENSCLMG00005009363) #17	gnl2 (ENSCLMG00005009359) #18	dnali1 (ENSCLMG00005009357) #19	snip1 (ENSCLMG00005009356)	MAP3K6 (ENSCLMG00005009166) #21	MAP7D1 (ENSCLMG00005009165) #22	THRAP3 (ENSCLMG00005009163) #23	sh3d21 (ENSCLMG00005009162) #24	eva1ba (ENSCLMG00005009161) #25	STK40 (ENSCLMG00005009160) #26	OSCP1 (ENSCLMG00005009149) #27	ENSCLMG00005009147 #28	mrps15 (ENSCLMG00005009146) #29	csf3r (ENSCLMG00005009144) #30	GRIK3 (ENSCLMG00005008787) #31	ZC3H12A (ENSCLMG00005008781) #32	INPP5B (ENSCLMG00005007032) #35	mtf1 (ENSCLMG00005007022) #36	yrdc (ENSCLMG00005007021) #37	MANEAL (ENSCLMG00005007019)	LIN28A (ENSCLMG00005007018)
Ovalentaria	ANCESTRAL SPECIES	3	ENSGT00530000063881.a.b #7	ENSGT01060000248564.a.b #8	ENSGT00940000158787 #9	ENSGT00940000159442 #10	ENSGT01090000260070.C.a #11	ENSGT00390000017974.nb #12	ENSGT00950000183031.A.a.a #13	ENSGT00940000165372 #14	ENSGT00390000005813 #15	ENSGT00950000183028.a.b.a #16	ENSGT00940000158871 #17	ENSGT00810000125524 #18	ENSGT00390000003012 #19	ENSGT00940000156553 #20	ENSGT00940000159398 #21	ENSGT00950000182941.a.a.b.e.a.b #22	ENSGT00950000183163.a.a.ab #23	ENSGT00940000160627 #24	ENSGT00940000154096.b.b.b.b.b #25	ENSGT00950000182986.b #26	ENSGT00390000004808.e #27	ENSGT00940000166129 #28	ENSGT00390000001737 #29	ENSGT00940000158915 #30	ENSGT00530000068429	ENSGT00940000159465 #31	ENSGT00940000155107.a.a.a #32	ENSGT00990000204035 #33	ENSGT00600000085609	ENSGT00990000203803 #34	ENSGT00940000156762 #35
Ovalentaria_B	ANCESTRAL SPECIES	1	ENSGT00530000063881.a.b #7	ENSGT01060000248564.a.b #8	ENSGT00940000158787 #9	ENSGT00940000159442 #10	ENSGT01090000260070.C.a #11	ENSGT00390000017974.nb #12	ENSGT00950000183031.A.a.a #13	ENSGT00940000165372 #14	ENSGT00390000005813 #15	ENSGT00950000183028.a.b.a #16	ENSGT00940000158871 #17	ENSGT00810000125524 #18	ENSGT00390000003012 #19	ENSGT00940000156553 #20	ENSGT00940000159398 #21	ENSGT00950000182941.a.a.b.e.a.b #22	ENSGT00950000183163.a.a.ab #23	ENSGT00940000160627 #24	ENSGT00940000154096.b.b.b.b.b #25	ENSGT00950000182986.b #26	ENSGT00390000004808.e #27	ENSGT00940000166129 #28	ENSGT00390000001737 #29	ENSGT00940000158915 #30	ENSGT00940000159465 #31	ENSGT00940000155107.a.a.a #32	ENSGT00990000204035 #33	ENSGT00600000085609	ENSGT00990000203803 #34	ENSGT00940000156762 #35	ENSGT00940000157291 #36
Pomacentridae	ANCESTRAL SPECIES	35	ENSGT00530000063881.a.b #7	ENSGT01060000248564.a.b #8	ENSGT00940000158787 #9	ENSGT00940000159442 #10	ENSGT01090000260070.C.a #11	ENSGT00390000017974.nb #12	ENSGT00950000183031.A.a.a #13	ENSGT00940000165372 #14	ENSGT00390000005813 #15	ENSGT00950000183028.a.b.a #16	ENSGT00940000158871 #17	ENSGT00810000125524 #18	ENSGT00390000003012 #19	ENSGT00940000156553.f #20	ENSGT00940000159398 #21	ENSGT00950000182941.a.a.b.e.a.b #22	ENSGT00950000183163.a.a.ab #23	ENSGT00940000160627 #24	ENSGT00940000154096.b.b.b.b.b #25	ENSGT00950000182986.b #26	ENSGT00390000004808.e #27	ENSGT00940000166129 #28	ENSGT00390000001737 #29	ENSGT00940000158915 #30	ENSGT00940000159465 #31	ENSGT00940000155107.a.a.a #32	ENSGT00990000203803 #34	ENSGT00990000204035 #33	ENSGT00940000156762 #35	ENSGT00940000157291 #36	ENSGT00390000015364.b #37
Pomacentridae_A	ANCESTRAL SPECIES	16	ENSGT00530000063881.a.b #7	ENSGT01060000248564.a.b #8	ENSGT00940000158787 #9	ENSGT00940000159442 #10	ENSGT01090000260070.C.a #11	ENSGT00390000017974.nb #12	ENSGT00950000183031.A.a.a #13	ENSGT00940000165372 #14	ENSGT00390000005813 #15	ENSGT00950000183028.a.b.a #16	ENSGT00940000158871 #17	ENSGT00810000125524 #18	ENSGT00390000003012 #19	ENSGT00940000156553.f #20	ENSGT00940000159398 #21	ENSGT00950000182941.a.a.b.e.a.b #22	ENSGT00950000183163.a.a.ab #23	ENSGT00940000160627 #24	ENSGT00940000154096.b.b.b.b.b #25	ENSGT00950000182986.b #26	ENSGT00390000004808.e #27	ENSGT00940000166129 #28	ENSGT00390000001737 #29	ENSGT00940000158915 #30	ENSGT00940000159465 #31	ENSGT00940000155107.a.a.a #32	ENSGT00990000204035 #33	ENSGT00940000156762 #35	ENSGT00940000157291 #36	ENSGT00390000015364.b #37	ENSGT00390000016054.b.i
Amphiprion	ANCESTRAL SPECIES	1	ENSGT00530000063881.a.b #7	ENSGT01060000248564.a.b #8	ENSGT00940000158787 #9	ENSGT00940000159442 #10	ENSGT01090000260070.C.a #11	ENSGT00390000017974.nb #12	ENSGT00950000183031.A.a.a #13	ENSGT00940000165372 #14	ENSGT00390000005813 #15	ENSGT00950000183028.a.b.a #16	ENSGT00940000158871 #17	ENSGT00810000125524 #18	ENSGT00390000003012 #19	ENSGT00940000156553.f #20	ENSGT00940000159398 #21	ENSGT00950000182941.a.a.b.e.a.b #22	ENSGT00950000183163.a.a.ab #23	ENSGT00940000160627 #24	ENSGT00940000154096.b.b.b.b.b #25	ENSGT00950000182986.b #26	ENSGT00390000004808.e #27	ENSGT00940000166129 #28	ENSGT00390000001737 #29	ENSGT00940000158915 #30	ENSGT00940000159465 #31	ENSGT00940000155107.a.a.a #32	ENSGT00990000203803 #34	ENSGT00990000204035 #33	ENSGT00940000156762 #35	ENSGT00940000157291 #36	ENSGT00390000015364.b #37
Clown anemonefish	MODERN SPECIES	1296										FHL3 (ENSAOCG00000014316) #16	rspo1 (ENSAOCG00000014341) #17	gnl2 (ENSAOCG00000014396) #18	dnali1 (ENSAOCG00000014444) #19	SNIP1 (ENSAOCG00000014455) #20	MAP3K6 (ENSAOCG00000014625) #21	MAP7D1 (ENSAOCG00000014698) #22	THRAP3 (ENSAOCG00000014738) #23	sh3d21 (ENSAOCG00000000988) #24	eva1ba (ENSAOCG00000014770) #25	STK40 (ENSAOCG00000000999) #26	OSCP1 (ENSAOCG00000001002) #27	ENSAOCG00000001009 #28	mrps15 (ENSAOCG00000014871) #29	csf3r (ENSAOCG00000014880) #30	GRIK3 (ENSAOCG00000002707) #31	ZC3H12A (ENSAOCG00000014937) #32	ENSAOCG00000001847 #34	ENSAOCG00000014980	INPP5B (ENSAOCG00000014998) #35	mtf1 (ENSAOCG00000015058) #36
Orange clownfish	MODERN SPECIES	21	pnrc2 (ENSAPEG00000004927) #7	cnr2 (ENSAPEG00000004941) #8	akirin1 (ENSAPEG00000005009) #9	rhbdl2 (ENSAPEG00000005028) #10	GJA9 (ENSAPEG00000005061) #11	MYCBP (ENSAPEG00000005073) #12	rragca (ENSAPEG00000005106) #13	pou3f1 (ENSAPEG00000005174) #14	utp11 (ENSAPEG00000005214) #15	FHL3 (ENSAPEG00000005272) #16	rspo1 (ENSAPEG00000005307) #17	gnl2 (ENSAPEG00000005375) #18	dnali1 (ENSAPEG00000005453) #19	SNIP1 (ENSAPEG00000005542) #20	MAP3K6 (ENSAPEG00000005570) #21	MAP7D1 (ENSAPEG00000005614) #22	THRAP3 (ENSAPEG00000005696) #23	sh3d21 (ENSAPEG00000005738) #24	eva1ba (ENSAPEG00000005773) #25	STK40 (ENSAPEG00000005892) #26	OSCP1 (ENSAPEG00000005918) #27	ENSAPEG00000005981 #28	mrps15 (ENSAPEG00000005965) #29	csf3r (ENSAPEG00000005997) #30	GRIK3 (ENSAPEG00000006019) #31	ZC3H12A (ENSAPEG00000006072) #32	ENSAPEG00000006078 #33	INPP5B (ENSAPEG00000006094) #35	mtf1 (ENSAPEG00000006125) #36	yrdc (ENSAPEG00000006164) #37	MANEAL (ENSAPEG00000006178)
Spiny chromis	MODERN SPECIES		SRSF10 (ENSAPOG00000024544)	pnrc2 (ENSAPOG00000024543) #7	cnr2 (ENSAPOG00000024541) #8	akirin1 (ENSAPOG00000024540) #9	rhbdl2 (ENSAPOG00000024538) #10	MYCBP (ENSAPOG00000024534) #12	rragca (ENSAPOG00000024532) #13	pou3f1 (ENSAPOG00000024530) #14	utp11 (ENSAPOG00000024525) #15	FHL3 (ENSAPOG00000024520) #16	rspo1 (ENSAPOG00000024512) #17	gnl2 (ENSAPOG00000024507) #18	dnali1 (ENSAPOG00000024495) #19	SNIP1 (ENSAPOG00000024490) #20	MAP3K6 (ENSAPOG00000024486) #21	MAP7D1 (ENSAPOG00000024474) #22	THRAP3 (ENSAPOG00000024453) #23	sh3d21 (ENSAPOG00000024442) #24	eva1ba (ENSAPOG00000024432) #25	STK40 (ENSAPOG00000024423) #26	OSCP1 (ENSAPOG00000024408) #27	ENSAPOG00000024397	mrps15 (ENSAPOG00000024393) #29	csf3r (ENSAPOG00000024384) #30	GRIK3 (ENSAPOG00000024373) #31	ZC3H12A (ENSAPOG00000024328) #32	ENSAPOG00000024319 #33	INPP5B (ENSAPOG00000024312) #35	mtf1 (ENSAPOG00000024298) #36	yrdc (ENSAPOG00000024293) #37	MANEAL (ENSAPOG00000024286)
Bicolor damselfish	MODERN SPECIES	1002								pou3f1 (ENSSPAG00000017202) #14	utp11 (ENSSPAG00000017221) #15	FHL3 (ENSSPAG00000017252) #16	rspo1 (ENSSPAG00000017297) #17	gnl2 (ENSSPAG00000017473) #18	dnali1 (ENSSPAG00000017535) #19	SNIP1 (ENSSPAG00000017549) #20	MAP3K6 (ENSSPAG00000017562) #21	MAP7D1 (ENSSPAG00000017601) #22	ENSSPAG00000017651 #23	sh3d21 (ENSSPAG00000017676) #24	eva1ba (ENSSPAG00000017702) #25
Cichlidae	ANCESTRAL SPECIES	9	ENSGT00940000154450.uc	ENSGT00530000063881.a.b #7	ENSGT01060000248564.a.b #8	ENSGT00940000158787 #9	ENSGT00940000159442 #10	ENSGT00390000017974.nb #12	ENSGT00950000183031.A.a.a #13	ENSGT00940000165372 #14	ENSGT00390000005813 #15	ENSGT00950000183028.a.b.a #16	ENSGT00940000158871 #17	ENSGT00810000125524 #18	ENSGT00390000003012 #19	ENSGT00940000156553 #20	ENSGT00940000159398 #21	ENSGT00950000182941.a.a.b.e.a.b #22	ENSGT00950000183163.a.a.ab #23	ENSGT00940000160627 #24	ENSGT00940000154096.b.b.b.b.b #25	ENSGT00950000182986.b #26	ENSGT00390000004808.e #27	ENSGT00940000166129 #28	ENSGT00390000001737 #29	ENSGT00940000158915 #30	ENSGT00940000159465 #31	ENSGT00940000155107.a.a.a #32	ENSGT00990000204035 #33	ENSGT00600000085609	ENSGT00940000178211	ENSGT00940000156762 #35	ENSGT00940000157291 #36
Pseudocrenilabrinae	ANCESTRAL SPECIES	2	ENSGT00940000154450.uc	ENSGT00530000063881.a.b #7	ENSGT01060000248564.a.b #8	ENSGT00940000158787 #9	ENSGT00940000159442 #10	ENSGT00390000017974.nb #12	ENSGT00950000183031.A.a.a #13	ENSGT00940000165372 #14	ENSGT00390000005813 #15	ENSGT00950000183028.a.b.a #16	ENSGT00940000158871 #17	ENSGT00810000125524 #18	ENSGT00390000003012 #19	ENSGT00940000156553 #20	ENSGT00940000159398 #21	ENSGT00950000182941.a.a.b.e.a.b #22	ENSGT00950000183163.a.a.ab #23	ENSGT00940000160627 #24	ENSGT00940000154096.b.b.b.b.b #25	ENSGT00950000182986.b #26	ENSGT00390000004808.e #27	ENSGT00940000166129 #28	ENSGT00390000001737 #29	ENSGT00940000158915 #30	ENSGT00940000159465 #31	ENSGT00940000155107.a.a.a #32	ENSGT00990000204035 #33	ENSGT00600000085609	ENSGT00940000178211	ENSGT00940000156762 #35	ENSGT00940000157291 #36
Pseudocrenilabrinae_A	ANCESTRAL SPECIES	1	ENSGT00940000154450.uc	ENSGT00530000063881.a.b #7	ENSGT01060000248564.a.b #8	ENSGT00940000158787 #9	ENSGT00940000159442 #10	ENSGT00390000017974.nb #12	ENSGT00950000183031.A.a.a #13	ENSGT00940000165372 #14	ENSGT00390000005813 #15	ENSGT00950000183028.a.b.a #16	ENSGT00940000158871 #17	ENSGT00810000125524 #18	ENSGT00390000003012 #19	ENSGT00940000156553 #20	ENSGT00940000159398 #21	ENSGT00950000182941.a.a.b.e.a.b #22	ENSGT00950000183163.a.a.ab #23	ENSGT00940000160627 #24	ENSGT00940000154096.b.b.b.b.b #25	ENSGT00950000182986.b #26	ENSGT00390000004808.e #27	ENSGT00940000166129 #28	ENSGT00390000001737 #29	ENSGT00940000158915 #30	ENSGT00940000159465 #31	ENSGT00940000155107.a.a.a #32	ENSGT00990000204035 #33	ENSGT00940000156762 #35	ENSGT00940000157291 #36	ENSGT00390000015364.b #37	ENSGT00390000016054.b.i
Haplochromini	ANCESTRAL SPECIES	6	ENSGT00530000063881.a.b #7	ENSGT01060000248564.a.b #8	ENSGT00940000158787 #9	ENSGT00940000159442 #10	ENSGT00390000017974.nb #12	ENSGT00950000183031.A.a.a #13	ENSGT00940000165372 #14	ENSGT00390000005813 #15	ENSGT00950000183028.a.b.a #16	ENSGT00940000158871 #17	ENSGT00940000166920	ENSGT00810000125524 #18	ENSGT00390000003012 #19	ENSGT00940000156553 #20	ENSGT00940000159398 #21	ENSGT00950000182941.a.a.b.e.a.b #22	ENSGT00950000183163.a.a.ab #23	ENSGT00940000160627 #24	ENSGT00940000154096.b.b.b.b.b #25	ENSGT00950000182986.b #26	ENSGT00390000004808.e #27	ENSGT00940000166129 #28	ENSGT00390000001737 #29	ENSGT00940000158915 #30	ENSGT00940000159465 #31	ENSGT00940000155107.a.a.a #32	ENSGT00990000204035 #33	ENSGT00940000156762 #35	ENSGT00940000157291 #36	ENSGT00390000015364.b #37	ENSGT00390000016054.b.i
Haplochromini_A	ANCESTRAL SPECIES	18	ENSGT00530000063881.a.b #7	ENSGT01060000248564.a.b #8	ENSGT00940000158787 #9	ENSGT00940000159442 #10	ENSGT00390000017974.nb #12	ENSGT00950000183031.A.a.a #13	ENSGT00940000165372 #14	ENSGT00390000005813 #15	ENSGT00950000183028.a.b.a #16	ENSGT00940000158871 #17	ENSGT00940000166920	ENSGT00810000125524 #18	ENSGT00390000003012 #19	ENSGT00940000156553 #20	ENSGT00940000159398 #21	ENSGT00950000182941.a.a.b.e.a.b #22	ENSGT00950000183163.a.a.ab #23	ENSGT00940000160627 #24	ENSGT00940000154096.b.b.b.b.b #25	ENSGT00950000182986.b #26	ENSGT00390000004808.e #27	ENSGT00940000166129 #28	ENSGT00390000001737 #29	ENSGT00940000158915 #30	ENSGT00940000159465 #31	ENSGT00940000155107.a.a.a #32	ENSGT00990000204035 #33	ENSGT00940000156762 #35	ENSGT00940000157291 #36	ENSGT00390000015364.b #37	ENSGT00390000016054.b.i
P. nyererei	MODERN SPECIES	362	SRSF10 (ENSPNYG00000012923)	pnrc2 (ENSPNYG00000012942) #7	cnr2 (ENSPNYG00000012954) #8	akirin1 (ENSPNYG00000012970) #9	rhbdl2 (ENSPNYG00000013006) #10	MYCBP (ENSPNYG00000013028) #12	rragca (ENSPNYG00000013099) #13	pou3f1 (ENSPNYG00000013130) #14	utp11 (ENSPNYG00000013140) #15	FHL3 (ENSPNYG00000013162) #16	rspo1 (ENSPNYG00000013177) #17	ENSPNYG00000013195	dnali1 (ENSPNYG00000013211) #19	SNIP1 (ENSPNYG00000013230) #20	ENSPNYG00000013247 #21	MAP7D1 (ENSPNYG00000013285) #22	THRAP3 (ENSPNYG00000013314) #23	sh3d21 (ENSPNYG00000013339) #24	eva1ba (ENSPNYG00000013357) #25	STK40 (ENSPNYG00000013365) #26	ENSPNYG00000013399 #27	ENSPNYG00000013414 #28	mrps15 (ENSPNYG00000013431) #29	csf3r (ENSPNYG00000013467) #30	GRIK3 (ENSPNYG00000013498) #31	ZC3H12A (ENSPNYG00000013534) #32	ENSPNYG00000013556	INPP5B (ENSPNYG00000013593) #35	mtf1 (ENSPNYG00000013739) #36	yrdc (ENSPNYG00000013956) #37	MANEAL (ENSPNYG00000013969)
Haplochromini_B	ANCESTRAL SPECIES	6	ENSGT00530000063881.a.b #7	ENSGT01060000248564.a.b #8	ENSGT00940000158787 #9	ENSGT00940000159442 #10	ENSGT00390000017974.nb #12	ENSGT00950000183031.A.a.a #13	ENSGT00940000165372 #14	ENSGT00390000005813 #15	ENSGT00950000183028.a.b.a #16	ENSGT00940000158871 #17	ENSGT00940000166920	ENSGT00810000125524 #18	ENSGT00390000003012 #19	ENSGT00940000156553 #20	ENSGT00940000159398 #21	ENSGT00950000182941.a.a.b.e.a.b #22	ENSGT00950000183163.a.a.ab #23	ENSGT00940000160627 #24	ENSGT00940000154096.b.b.b.b.b #25	ENSGT00950000182986.b #26	ENSGT00390000004808.e #27	ENSGT00940000166129 #28	ENSGT00390000001737 #29	ENSGT00940000158915 #30	ENSGT00940000159465 #31	ENSGT00940000155107.a.a.a #32	ENSGT00990000204035 #33	ENSGT00940000156762 #35	ENSGT00940000157291 #36	ENSGT00390000015364.b #37	ENSGT00390000016054.b.i
Zebra mbuna	MODERN SPECIES	1093	ENSMZEG00005007618	ENSMZEG00005007606	xrcc1 (ENSMZEG00005007596)	drd2l (ENSMZEG00005007578)	ethe1 (ENSMZEG00005007552)	ethe1 (ENSMZEG00005007535)	ENSMZEG00005007520	ENSMZEG00005007501	irgq2 (ENSMZEG00005007489)	ENSMZEG00005007454	cox5aa (ENSMZEG00005007429)	gnl2 (ENSMZEG00005007393) #18	dnali1 (ENSMZEG00005007377) #19	SNIP1 (ENSMZEG00005007365) #20	ENSMZEG00005007342 #21	MAP7D1 (ENSMZEG00005007251) #22	THRAP3 (ENSMZEG00005007212) #23	sh3d21 (ENSMZEG00005007196) #24	eva1ba (ENSMZEG00005007187) #25	STK40 (ENSMZEG00005007149) #26	OSCP1 (ENSMZEG00005007120) #27	ENSMZEG00005007095 #28	mrps15 (ENSMZEG00005007070) #29	csf3r (ENSMZEG00005007036) #30	GRIK3 (ENSMZEG00005007006) #31	ZC3H12A (ENSMZEG00005006997) #32	ENSMZEG00005006991 #33	ENSMZEG00005006982	INPP5B (ENSMZEG00005006964) #35	mtf1 (ENSMZEG00005006956) #36	yrdc (ENSMZEG00005006948) #37
Eastern happy	MODERN SPECIES	2	SRSF10 (ENSACLG00000000662)	pnrc2 (ENSACLG00000000649) #7	cnr2 (ENSACLG00000000646) #8	akirin1 (ENSACLG00000000618) #9	rhbdl2 (ENSACLG00000000595) #10	MYCBP (ENSACLG00000000565) #12	rragca (ENSACLG00000000534) #13	pou3f1 (ENSACLG00000000389) #14	utp11 (ENSACLG00000000339) #15	FHL3 (ENSACLG00000000312) #16	rspo1 (ENSACLG00000000298) #17	dnali1 (ENSACLG00000000265) #19	ENSACLG00000000115	SNIP1 (ENSACLG00000000108) #20	ENSACLG00000000084 #21	MAP7D1 (ENSACLG00000000048) #22	ENSACLG00000027855	THRAP3 (ENSACLG00000027851) #23	sh3d21 (ENSACLG00000027848) #24	eva1ba (ENSACLG00000027847) #25	STK40 (ENSACLG00000027839) #26	OSCP1 (ENSACLG00000027829) #27	ENSACLG00000027824 #28	mrps15 (ENSACLG00000027820) #29	csf3r (ENSACLG00000027809) #30	GRIK3 (ENSACLG00000027806) #31	ZC3H12A (ENSACLG00000027801) #32	ENSACLG00000027799 #33	INPP5B (ENSACLG00000027782) #35	mtf1 (ENSACLG00000027779) #36	yrdc (ENSACLG00000027775) #37
Burton s mouthbrooder	MODERN SPECIES	340	SRSF10 (ENSHBUG00000010070)	pnrc2 (ENSHBUG00000010043) #7	cnr2 (ENSHBUG00000010030) #8	akirin1 (ENSHBUG00000010024) #9	rhbdl2 (ENSHBUG00000009992) #10	MYCBP (ENSHBUG00000009957) #12	rragca (ENSHBUG00000009931) #13	pou3f1 (ENSHBUG00000009911) #14	utp11 (ENSHBUG00000009895) #15	FHL3 (ENSHBUG00000009864) #16	rspo1 (ENSHBUG00000009811) #17	ENSHBUG00000000835	dnali1 (ENSHBUG00000009777) #19	SNIP1 (ENSHBUG00000009756) #20	ENSHBUG00000009741 #21	MAP7D1 (ENSHBUG00000009652) #22	THRAP3 (ENSHBUG00000009602) #23	sh3d21 (ENSHBUG00000009579) #24	eva1ba (ENSHBUG00000009558) #25	STK40 (ENSHBUG00000009547) #26	OSCP1 (ENSHBUG00000009513) #27	ENSHBUG00000009469 #28	mrps15 (ENSHBUG00000009456) #29	csf3r (ENSHBUG00000009429) #30	GRIK3 (ENSHBUG00000009396) #31	ZC3H12A (ENSHBUG00000009356) #32	INPP5B (ENSHBUG00000009350) #35	mtf1 (ENSHBUG00000009314) #36	yrdc (ENSHBUG00000009298) #37	MANEAL (ENSHBUG00000009290)	LIN28A (ENSHBUG00000009265)
Lyretail cichlid	MODERN SPECIES	311	ENSNBRG00000010616	pnrc2 (ENSNBRG00000010605) #7	cnr2 (ENSNBRG00000010586) #8	akirin1 (ENSNBRG00000010549) #9	rhbdl2 (ENSNBRG00000010511) #10	MYCBP (ENSNBRG00000010493) #12	rragca (ENSNBRG00000010467) #13	pou3f1 (ENSNBRG00000010456) #14	utp11 (ENSNBRG00000010435) #15	FHL3 (ENSNBRG00000010416) #16	rspo1 (ENSNBRG00000010347) #17	gnl2 (ENSNBRG00000010291) #18	dnali1 (ENSNBRG00000010268) #19	SNIP1 (ENSNBRG00000010257) #20	ENSNBRG00000010049 #21	MAP7D1 (ENSNBRG00000010005) #22	THRAP3 (ENSNBRG00000009991) #23	sh3d21 (ENSNBRG00000009956) #24	eva1ba (ENSNBRG00000009946) #25	STK40 (ENSNBRG00000009915) #26	OSCP1 (ENSNBRG00000009883) #27	ENSNBRG00000009860 #28	mrps15 (ENSNBRG00000009851) #29	csf3r (ENSNBRG00000009712) #30	ENSNBRG00000009681	GRIK3 (ENSNBRG00000009631) #31	ZC3H12A (ENSNBRG00000009607) #32	ENSNBRG00000009581	ENSNBRG00000009571 #35	ENSNBRG00000009559 #35	mtf1 (ENSNBRG00000009532) #36
Nile tilapia	MODERN SPECIES	2	ENSONIG00000028387	cnr2 (ENSONIG00000016314) #8	akirin1 (ENSONIG00000039753) #9	rhbdl2 (ENSONIG00000016311) #10	MYCBP (ENSONIG00000035578) #12	rragc (ENSONIG00000032190) #13	pou3f1 (ENSONIG00000021113) #14	utp11 (ENSONIG00000033069) #15	fhl3 (ENSONIG00000013661) #16	rspo1 (ENSONIG00000016302) #17	ENSONIG00000016291	dnali1 (ENSONIG00000016300) #19	SNIP1 (ENSONIG00000016290) #20	ENSONIG00000041284	ENSONIG00000016285 #21	MAP7D1 (ENSONIG00000016283) #22	THRAP3 (ENSONIG00000016278) #23	sh3d21 (ENSONIG00000016273) #24	eva1b (ENSONIG00000042590) #25	STK40 (ENSONIG00000037285) #26	OSCP1 (ENSONIG00000016265) #27	ENSONIG00000043059 #28	mrps15 (ENSONIG00000016261) #29	csf3r (ENSONIG00000016254) #30	GRIK3 (ENSONIG00000016238) #31	ZC3H12A (ENSONIG00000016235) #32	ENSONIG00000037129 #33	ENSONIG00000030694	INPP5B (ENSONIG00000016229) #35	mtf1 (ENSONIG00000016218) #36	yrdc (ENSONIG00000016213) #37
Midas cichlid	MODERN SPECIES	668	pnrc2 (ENSACIG00000018693) #7	cnr2 (ENSACIG00000018688) #8	akirin1 (ENSACIG00000018678) #9	rhbdl2 (ENSACIG00000018661) #10	ENSACIG00000018646	MYCBP (ENSACIG00000018598) #12	rragca (ENSACIG00000018548) #13	pou3f1 (ENSACIG00000018538) #14	utp11 (ENSACIG00000018523) #15	FHL3 (ENSACIG00000018508) #16	rspo1 (ENSACIG00000018378) #17	gnl2 (ENSACIG00000018346) #18	dnali1 (ENSACIG00000018337) #19	SNIP1 (ENSACIG00000018325) #20	ENSACIG00000018194 #21	MAP7D1 (ENSACIG00000018142) #22	THRAP3 (ENSACIG00000018110) #23	ENSACIG00000018107	sh3d21 (ENSACIG00000018083) #24	eva1ba (ENSACIG00000018069) #25	STK40 (ENSACIG00000018038) #26	OSCP1 (ENSACIG00000018007) #27	ENSACIG00000017948 #28	mrps15 (ENSACIG00000017933) #29	csf3r (ENSACIG00000017809) #30	GRIK3 (ENSACIG00000017772) #31	ZC3H12A (ENSACIG00000017750) #32	INPP5B (ENSACIG00000017714) #35	mtf1 (ENSACIG00000017387) #36	yrdc (ENSACIG00000017330) #37	MANEAL (ENSACIG00000017324)
Atherinomorphae	ANCESTRAL SPECIES		ENSGT00530000063881.a.b #7	ENSGT01060000248564.a.b #8	ENSGT00940000158787 #9	ENSGT00940000159442 #10	ENSGT01090000260070.C.a #11	ENSGT00390000017974.nb #12	ENSGT00950000183031.A.a.a #13	ENSGT00940000165372 #14	ENSGT00390000005813 #15	ENSGT00950000183028.a.b.a #16	ENSGT00940000158871 #17	ENSGT00810000125524 #18	ENSGT00390000003012 #19	ENSGT00940000156553 #20	ENSGT00940000159398 #21	ENSGT00950000182941.a.a.b.e.a.b #22	ENSGT00950000183163.a.a.ab #23	ENSGT00940000160627 #24	ENSGT00940000154096.b.b.b.b.b #25	ENSGT00950000182986.b #26	ENSGT00390000004808.e #27	ENSGT00940000166129 #28	ENSGT00390000001737 #29	ENSGT00940000158915 #30	ENSGT00530000068429	ENSGT00940000159465 #31	ENSGT00940000155107.a.a.a #32	ENSGT00990000204035 #33	ENSGT00600000085609	ENSGT00940000156762 #35	ENSGT00940000157291 #36
Cyprinodontiformes	ANCESTRAL SPECIES		ENSGT00530000063881.a.b #7	ENSGT01060000248564.a.b #8	ENSGT00940000158787 #9	ENSGT00940000159442 #10	ENSGT01090000260070.C.a #11	ENSGT00390000017974.nb #12	ENSGT00950000183031.A.a.a #13	ENSGT00940000165372 #14	ENSGT00390000005813 #15	ENSGT00950000183028.a.b.a #16	ENSGT00940000158871 #17	ENSGT00810000125524 #18	ENSGT00390000003012 #19	ENSGT00940000156553 #20	ENSGT00940000159398 #21	ENSGT00950000182941.a.a.b.e.a.b #22	ENSGT00950000183163.a.a.ab #23	ENSGT00940000160627 #24	ENSGT00940000154096.b.b.b.b.b #25	ENSGT00950000182986.b #26	ENSGT00390000004808.e #27	ENSGT00940000166129 #28	ENSGT00390000001737 #29	ENSGT00940000158915 #30	ENSGT00530000068429	ENSGT00940000159465 #31	ENSGT00940000155107.a.a.a #32	ENSGT00990000204035 #33	ENSGT00600000085609	ENSGT00940000156762 #35	ENSGT00940000157291 #36
Aplocheiloidei	ANCESTRAL SPECIES	2	ENSGT00940000164147.a	ENSGT00530000063881.a.b #7	ENSGT01060000248564.a.b #8	ENSGT00940000158787 #9	ENSGT00940000159442 #10	ENSGT00390000017974.nb #12	ENSGT00950000183031.A.a.a #13	ENSGT00940000165372 #14	ENSGT00390000005813 #15	ENSGT00950000183028.a.b.a #16	ENSGT00940000158871 #17	ENSGT00810000125524 #18	ENSGT00390000003012 #19	ENSGT00940000156553 #20	ENSGT00940000159398 #21	ENSGT00950000182941.a.a.b.e.a.b #22	ENSGT00950000183163.a.a.ab #23	ENSGT00940000160627 #24	ENSGT00940000154096.b.b.b.b.b #25	ENSGT00950000182986.b #26	ENSGT00390000004808.e #27	ENSGT00940000166129 #28	ENSGT00390000001737 #29	ENSGT00940000158915 #30	ENSGT00940000159465 #31	ENSGT00940000155107.a.a.a #32	ENSGT00990000204035 #33	ENSGT00940000156762 #35	ENSGT00940000157291 #36	ENSGT00390000015364.b #37	ENSGT00390000016054.b.i
Mangrove rivulus	MODERN SPECIES	73	fabp10a (ENSKMAG00000019147)	pnrc2 (ENSKMAG00000019136) #7	cnr2 (ENSKMAG00000019129) #8	akirin1 (ENSKMAG00000019113) #9	rhbdl2 (ENSKMAG00000019086) #10	ENSKMAG00000019064 #12	rragca (ENSKMAG00000019035) #13	pou3f1 (ENSKMAG00000019017) #14	utp11 (ENSKMAG00000018988) #15	FHL3 (ENSKMAG00000018962) #16	rspo1 (ENSKMAG00000018927) #17	gnl2 (ENSKMAG00000018855) #18	dnali1 (ENSKMAG00000018825) #19	SNIP1 (ENSKMAG00000018806) #20	MAP3K6 (ENSKMAG00000018751) #21	ENSKMAG00000018674 #22	ENSKMAG00000018581	nampt2 (ENSKMAG00000018545)	LDLRAD2 (ENSKMAG00000018524)	ENSKMAG00000018496	ENSKMAG00000018456	camk1ga (ENSKMAG00000018425)	USP48 (ENSKMAG00000018330)	ENSKMAG00000018292	cyb561d1 (ENSKMAG00000018272)	atxn7l2a (ENSKMAG00000018254)	sypl2a (ENSKMAG00000018238)	fbxo2 (ENSKMAG00000018221)	svbp (ENSKMAG00000018202)
Turquoise killifish	MODERN SPECIES	1614	MYOM3 (ENSNFUG00015020150)	ENSNFUG00015020175	FABP10A (ENSNFUG00015020177)	PNRC2 (ENSNFUG00015020180) #7	cnr2 (ENSNFUG00015020184) #8	ENSNFUG00015020185	ENSNFUG00015020190	POU3F1 (ENSNFUG00015020193) #14	utp11 (ENSNFUG00015020196) #15	FHL3 (ENSNFUG00015020200) #16	RSPO1 (ENSNFUG00015020203) #17	GNL2 (ENSNFUG00015020230) #18	DNALI1 (ENSNFUG00015020891) #19	SNIP1 (ENSNFUG00015020894) #20	MAP3K6 (ENSNFUG00015000154) #21	MAP7D1 (ENSNFUG00015000327) #22	THRAP3 (ENSNFUG00015000347) #23	SH3D21 (ENSNFUG00015000370) #24	EVA1BA (ENSNFUG00015000393) #25	STK40 (ENSNFUG00015000432) #26	CNFN (ENSNFUG00015000488) #28	MRPS15 (ENSNFUG00015000499) #29	GRIK3 (ENSNFUG00015000661) #31	ZC3H12A (ENSNFUG00015000897) #32	ENSNFUG00015000899 #33	INPP5B (ENSNFUG00015000938) #35	MTF1 (ENSNFUG00015001054) #36	YRDC (ENSNFUG00015001069) #37	MANEAL (ENSNFUG00015001077)	LIN28A (ENSNFUG00015001082)	MECR (ENSNFUG00015001090)
Cyprinodontoidei	ANCESTRAL SPECIES		ENSGT00530000063881.a.b #7	ENSGT01060000248564.a.b #8	ENSGT00940000158787 #9	ENSGT00940000159442 #10	ENSGT01090000260070.C.a #11	ENSGT00390000017974.nb #12	ENSGT00950000183031.A.a.a #13	ENSGT00940000165372 #14	ENSGT00390000005813 #15	ENSGT00950000183028.a.b.a #16	ENSGT00940000158871 #17	ENSGT00810000125524 #18	ENSGT00390000003012 #19	ENSGT00940000156553 #20	ENSGT00940000159398 #21	ENSGT00950000182941.a.a.b.e.a.b #22	ENSGT00950000183163.a.a.ab #23	ENSGT00940000160627 #24	ENSGT00940000154096.b.b.b.b.b #25	ENSGT00950000182986.b #26	ENSGT00390000004808.e #27	ENSGT00940000166129 #28	ENSGT00390000001737 #29	ENSGT00940000158915 #30	ENSGT00530000068429	ENSGT00940000159465 #31	ENSGT00940000155107.a.a.a #32	ENSGT00990000204035 #33	ENSGT00600000085609	ENSGT00940000156762 #35	ENSGT00940000157291 #36
NAME_4	ANCESTRAL SPECIES	55	ENSGT00530000063881.a.b #7	ENSGT01060000248564.a.b #8	ENSGT00940000158787 #9	ENSGT00940000159442 #10	ENSGT01090000260070.C.a #11	ENSGT00390000017974.nb #12	ENSGT00950000183031.A.a.a #13	ENSGT00940000165372 #14	ENSGT00390000005813 #15	ENSGT00950000183028.a.b.a #16	ENSGT00940000158871 #17	ENSGT00810000125524 #18	ENSGT00390000003012 #19	ENSGT00940000156553 #20	ENSGT00940000159398 #21	ENSGT00950000182941.a.a.b.e.a.b #22	ENSGT00950000183163.a.a.ab #23	ENSGT00940000160627 #24	ENSGT00940000154096.b.b.b.b.b #25	ENSGT00950000182986.b #26	ENSGT00390000004808.e #27	ENSGT00940000171773	ENSGT00390000001737 #29	ENSGT00940000158915 #30	ENSGT00940000159465 #31	ENSGT00940000155107.a.a.a #32	ENSGT00990000204035 #33	ENSGT00940000156762 #35	ENSGT00940000157291 #36	ENSGT00390000015364.b #37	ENSGT00390000016054.b.i
Mummichog	MODERN SPECIES	2410																MAP7D1 (ENSFHEG00000000983) #22	THRAP3 (ENSFHEG00000000989) #23	sh3d21 (ENSFHEG00000000996) #24	eva1ba (ENSFHEG00000001000) #25	STK40 (ENSFHEG00000001002) #26	OSCP1 (ENSFHEG00000001008) #27	ENSFHEG00000001010	mrps15 (ENSFHEG00000001013) #29	csf3r (ENSFHEG00000001015) #30	GRIK3 (ENSFHEG00000001018) #31	ZC3H12A (ENSFHEG00000001019) #32	INPP5B (ENSFHEG00000001022) #35	mtf1 (ENSFHEG00000001026) #36	yrdc (ENSFHEG00000001029) #37	MANEAL (ENSFHEG00000001033)	ENSFHEG00000001035
Sheepshead minnow	MODERN SPECIES	118	pnrc2 (ENSCVAG00000018099) #7	cnr2 (ENSCVAG00000018091) #8	akirin1 (ENSCVAG00000018071) #9	rhbdl2 (ENSCVAG00000018052) #10	GJA9 (ENSCVAG00000018024) #11	ENSCVAG00000018007 #12	rragca (ENSCVAG00000017979) #13	pou3f1 (ENSCVAG00000017958) #14	utp11 (ENSCVAG00000000900) #15	FHL3 (ENSCVAG00000017747) #16	rspo1 (ENSCVAG00000000459) #17	gnl2 (ENSCVAG00000017712) #18	dnali1 (ENSCVAG00000017701) #19	snip1 (ENSCVAG00000017689)	MAP3K6 (ENSCVAG00000017684) #21	MAP7D1 (ENSCVAG00000017671) #22	THRAP3 (ENSCVAG00000017634) #23	sh3d21 (ENSCVAG00000017624) #24	eva1ba (ENSCVAG00000017604) #25	STK40 (ENSCVAG00000017594) #26	OSCP1 (ENSCVAG00000017554) #27	ENSCVAG00000017521	mrps15 (ENSCVAG00000017500) #29	csf3r (ENSCVAG00000017491) #30	GRIK3 (ENSCVAG00000017478) #31	ZC3H12A (ENSCVAG00000017420) #32	ENSCVAG00000017412 #33	INPP5B (ENSCVAG00000017401) #35	mtf1 (ENSCVAG00000017389) #36	yrdc (ENSCVAG00000017355) #37	MANEAL (ENSCVAG00000017347)
Poeciliinae	ANCESTRAL SPECIES		ENSGT00940000164147.a	ENSGT00530000063881.a.b #7	ENSGT01060000248564.a.b #8	ENSGT00940000158787 #9	ENSGT00940000159442 #10	ENSGT00390000017974.nb #12	ENSGT00950000183031.A.a.a #13	ENSGT00940000165372 #14	ENSGT00390000005813 #15	ENSGT00950000183028.a.b.a #16	ENSGT00940000158871 #17	ENSGT00810000125524 #18	ENSGT00390000003012 #19	ENSGT00940000156553 #20	ENSGT00940000159398 #21	ENSGT00950000182941.a.a.b.e.a.b #22	ENSGT00950000183163.a.a.ab #23	ENSGT00940000160627 #24	ENSGT00940000154096.b.b.b.b.b #25	ENSGT00950000182986.b #26	ENSGT00390000004808.e #27	ENSGT00940000166129 #28	ENSGT00390000001737 #29	ENSGT00940000158915 #30	ENSGT00530000068429	ENSGT00940000159465 #31	ENSGT00940000155107.a.a.a #32	ENSGT00990000204035 #33	ENSGT00600000085609	ENSGT00940000156762 #35	ENSGT00940000157291 #36
Poecilia	ANCESTRAL SPECIES		ENSGT00940000164147.a	ENSGT00530000063881.a.b #7	ENSGT01060000248564.a.b #8	ENSGT00940000158787 #9	ENSGT00940000159442 #10	ENSGT00390000017974.nb #12	ENSGT00950000183031.A.a.a #13	ENSGT00940000165372 #14	ENSGT00390000005813 #15	ENSGT00950000183028.a.b.a #16	ENSGT00940000158871 #17	ENSGT00810000125524 #18	ENSGT00390000003012 #19	ENSGT00940000156553 #20	ENSGT00940000159398 #21	ENSGT00950000182941.a.a.b.e.a.b #22	ENSGT00950000183163.a.a.ab #23	ENSGT00940000160627 #24	ENSGT00940000154096.b.b.b.b.b #25	ENSGT00950000182986.b #26	ENSGT00390000004808.e #27	ENSGT00940000166129 #28	ENSGT00390000001737 #29	ENSGT00940000158915 #30	ENSGT00530000068429	ENSGT00940000159465 #31	ENSGT00940000155107.a.a.a #32	ENSGT00990000204035 #33	ENSGT00600000085609	ENSGT00940000156762 #35	ENSGT00940000157291 #36
NAME_6	ANCESTRAL SPECIES	152												ENSGT00810000125524 #18	ENSGT00390000003012 #19	ENSGT00940000156553 #20	ENSGT00940000159398 #21	ENSGT00950000182941.a.a.b.e.a.b #22	ENSGT00950000183163.a.a.ab #23	ENSGT00940000160627 #24	ENSGT00940000154096.b.b.b.b.b #25	ENSGT00950000182986.b #26	ENSGT00390000004808.e #27	ENSGT00940000171773	ENSGT00390000001737 #29	ENSGT00940000158915 #30	ENSGT00530000068429	ENSGT00940000159465 #31	ENSGT00940000155107.a.a.a #32	ENSGT00990000204035 #33	ENSGT00600000085609	ENSGT00940000156762 #35	ENSGT00940000157291 #36
Amazon molly	MODERN SPECIES	337												gnl2 (ENSPFOG00000012893) #18	dnali1 (ENSPFOG00000012981) #19	SNIP1 (ENSPFOG00000013016) #20	MAP3K6 (ENSPFOG00000013047) #21	MAP7D1 (ENSPFOG00000013255) #22	THRAP3 (ENSPFOG00000013297) #23	sh3d21 (ENSPFOG00000013375) #24	eva1ba (ENSPFOG00000013421) #25	STK40 (ENSPFOG00000013431) #26	OSCP1 (ENSPFOG00000013493) #27	ENSPFOG00000013535	mrps15 (ENSPFOG00000013553) #29	csf3r (ENSPFOG00000013594) #30	ENSPFOG00000022696	GRIK3 (ENSPFOG00000013674) #31	ZC3H12A (ENSPFOG00000013935) #32	ENSPFOG00000013949 #33	ENSPFOG00000022057	INPP5B (ENSPFOG00000013954) #35	mtf1 (ENSPFOG00000013962) #36
Sailfin molly	MODERN SPECIES	684												gnl2 (ENSPLAG00000012483) #18	dnali1 (ENSPLAG00000000807) #19	SNIP1 (ENSPLAG00000012467) #20	MAP3K6 (ENSPLAG00000012456) #21	MAP7D1 (ENSPLAG00000000527) #22	THRAP3 (ENSPLAG00000000635) #23	sh3d21 (ENSPLAG00000012341) #24	eva1ba (ENSPLAG00000012312) #25	STK40 (ENSPLAG00000012294) #26
Guppy	MODERN SPECIES	446	fabp10a (ENSPREG00000006252)	pnrc2 (ENSPREG00000006242) #7	cnr2 (ENSPREG00000006231) #8	akirin1 (ENSPREG00000006214) #9	rhbdl2 (ENSPREG00000006169) #10	ENSPREG00000006142 #12	rragca (ENSPREG00000006113) #13	pou3f1 (ENSPREG00000006101) #14	utp11 (ENSPREG00000006068) #15	FHL3 (ENSPREG00000006051) #16	rspo1 (ENSPREG00000006040) #17	gnl2 (ENSPREG00000005988) #18	dnali1 (ENSPREG00000005961) #19	snip1 (ENSPREG00000005952)	MAP3K6 (ENSPREG00000005903) #21	MAP7D1 (ENSPREG00000005854) #22	THRAP3 (ENSPREG00000005816) #23	sh3d21 (ENSPREG00000005794) #24	eva1ba (ENSPREG00000005771) #25	STK40 (ENSPREG00000005733) #26	OSCP1 (ENSPREG00000005686) #27	ENSPREG00000005621 #28	mrps15 (ENSPREG00000005592) #29	csf3r (ENSPREG00000005562) #30	GRIK3 (ENSPREG00000005481) #31	ZC3H12A (ENSPREG00000005453) #32	ENSPREG00000005442 #33	INPP5B (ENSPREG00000005365) #35	mtf1 (ENSPREG00000005331) #36	yrdc (ENSPREG00000005285) #37	MANEAL (ENSPREG00000005276)
Platyfish	MODERN SPECIES	17	fabp10a (ENSXMAG00000025668)	pnrc2 (ENSXMAG00000019531) #7	cnr2 (ENSXMAG00000013232) #8	akirin1 (ENSXMAG00000013230) #9	rhbdl2 (ENSXMAG00000002343) #10	ENSXMAG00000013229 #12	rragca (ENSXMAG00000026290) #13	pou3f1 (ENSXMAG00000019529) #14	utp11 (ENSXMAG00000013219) #15	FHL3 (ENSXMAG00000029691) #16	rspo1 (ENSXMAG00000028817) #17	gnl2 (ENSXMAG00000014898) #18	dnali1 (ENSXMAG00000014886) #19	SNIP1 (ENSXMAG00000014885) #20	ENSXMAG00000014853 #21	MAP7D1 (ENSXMAG00000014815) #22	THRAP3 (ENSXMAG00000014797) #23	sh3d21 (ENSXMAG00000001593) #24	eva1ba (ENSXMAG00000001589) #25	STK40 (ENSXMAG00000029028) #26	OSCP1 (ENSXMAG00000014752) #27	ENSXMAG00000024500 #28	mrps15 (ENSXMAG00000028874) #29	csf3r (ENSXMAG00000014732) #30	GRIK3 (ENSXMAG00000014647) #31	ZC3H12A (ENSXMAG00000014646) #32	ENSXMAG00000021281 #33	INPP5B (ENSXMAG00000014629) #35	mtf1 (ENSXMAG00000014614) #36	yrdc (ENSXMAG00000014606) #37	MANEAL (ENSXMAG00000014596)
Oryzias	ANCESTRAL SPECIES	2	ENSGT00530000063881.a.b #7	ENSGT01060000248564.a.b #8	ENSGT00940000158787 #9	ENSGT00940000159442 #10	ENSGT01090000260070.C.a #11	ENSGT00390000017974.nb #12	ENSGT00950000183031.A.a.a #13	ENSGT00940000165372 #14	ENSGT00390000005813 #15	ENSGT00950000183028.a.b.a #16	ENSGT00940000158871 #17	ENSGT00810000125524 #18	ENSGT00390000003012 #19	ENSGT00940000156553 #20	ENSGT00940000159398 #21	ENSGT00950000182941.a.a.b.e.a.b #22	ENSGT00950000183163.a.a.ab #23	ENSGT00940000160627 #24	ENSGT00940000154096.b.b.b.b.b #25	ENSGT00950000182986.b #26	ENSGT00390000004808.e #27	ENSGT00940000166129 #28	ENSGT00390000001737 #29	ENSGT00940000158915 #30	ENSGT00940000159465 #31	ENSGT00940000155107.a.a.a #32	ENSGT00990000204035 #33	ENSGT00940000156762 #35	ENSGT00940000157291 #36	ENSGT00390000015364.b #37	ENSGT00390000016054.b.i
Oryzias_b	ANCESTRAL SPECIES	1	ENSGT00940000164147.a	ENSGT00530000063881.a.b #7	ENSGT01060000248564.a.b #8	ENSGT00940000158787 #9	ENSGT00940000159442 #10	ENSGT01090000260070.C.a #11	ENSGT00390000017974.nb #12	ENSGT00940000165372 #14	ENSGT00390000005813 #15	ENSGT00950000183028.a.b.a #16	ENSGT00940000158871 #17	ENSGT00810000125524 #18	ENSGT00390000003012 #19	ENSGT00940000156553 #20	ENSGT00940000159398 #21	ENSGT00950000182941.a.a.b.e.a.b #22	ENSGT00950000183163.a.a.ab #23	ENSGT00940000160627 #24	ENSGT00940000154096.b.b.b.b.b #25	ENSGT00950000182986.b #26	ENSGT00390000004808.e #27	ENSGT00940000166129 #28	ENSGT00390000001737 #29	ENSGT00940000158915 #30	ENSGT00940000159465 #31	ENSGT00940000155107.a.a.a #32	ENSGT00990000204035 #33	ENSGT00940000156762 #35	ENSGT00940000157291 #36	ENSGT00390000015364.b #37	ENSGT00390000016054.b.i
Javanese ricefish	MODERN SPECIES	7	pnrc2 (ENSOJAG00000008605) #7	cnr2 (ENSOJAG00000008565) #8	akirin1 (ENSOJAG00000008552) #9	rhbdl2 (ENSOJAG00000008540) #10	GJA9 (ENSOJAG00000008511) #11	MYCBP (ENSOJAG00000008501) #12	rragca (ENSOJAG00000008450) #13	pou3f1 (ENSOJAG00000008412) #14	utp11 (ENSOJAG00000008374) #15	FHL3 (ENSOJAG00000008350) #16	rspo1 (ENSOJAG00000008324) #17	gnl2 (ENSOJAG00000008221) #18	dnali1 (ENSOJAG00000008190) #19	SNIP1 (ENSOJAG00000008177) #20	ENSOJAG00000006023 #21	MAP7D1 (ENSOJAG00000005723) #22	ENSOJAG00000005706	THRAP3 (ENSOJAG00000005670) #23	sh3d21 (ENSOJAG00000005635) #24	eva1ba (ENSOJAG00000005620) #25	STK40 (ENSOJAG00000005584) #26	ENSOJAG00000005568 #28	OSCP1 (ENSOJAG00000005328) #27	CSF3R (ENSOJAG00000005292) #30	GRIK3 (ENSOJAG00000004802) #31	ENSOJAG00000004702	ZC3H12A (ENSOJAG00000004692) #32	ENSOJAG00000004681 #33	INPP5B (ENSOJAG00000003535) #35	mtf1 (ENSOJAG00000003279) #36	yrdc (ENSOJAG00000003259) #37
Indian medaka	MODERN SPECIES	5	pnrc2 (ENSOMEG00000019937) #7	cnr2 (ENSOMEG00000019931) #8	akirin1 (ENSOMEG00000019917) #9	rhbdl2 (ENSOMEG00000019884) #10	GJA9 (ENSOMEG00000019858) #11	ENSOMEG00000019842	MYCBP (ENSOMEG00000019821) #12	rragca (ENSOMEG00000000525) #13	FHL3 (ENSOMEG00000019712) #16	utp11 (ENSOMEG00000019654) #15	rspo1 (ENSOMEG00000019637) #17	gnl2 (ENSOMEG00000019611) #18	dnali1 (ENSOMEG00000019563) #19	snip1 (ENSOMEG00000019541)	MAP3K6 (ENSOMEG00000019496) #21	MAP7D1 (ENSOMEG00000019294) #22	THRAP3 (ENSOMEG00000019164) #23	sh3d21 (ENSOMEG00000019023) #24	eva1ba (ENSOMEG00000018998) #25	STK40 (ENSOMEG00000018961) #26	OSCP1 (ENSOMEG00000018874) #27	ENSOMEG00000018849	mrps15 (ENSOMEG00000000701) #29	csf3r (ENSOMEG00000000488) #30	GRIK3 (ENSOMEG00000018771) #31	ZC3H12A (ENSOMEG00000000483) #32	ENSOMEG00000018697 #33	INPP5B (ENSOMEG00000018665) #35	mtf1 (ENSOMEG00000018579) #36	yrdc (ENSOMEG00000018550) #37	MANEAL (ENSOMEG00000000478)
Oryzias_a	ANCESTRAL SPECIES	9	ENSGT00530000063881.a.b #7	ENSGT01060000248564.a.b #8	ENSGT00940000158787 #9	ENSGT00940000159442 #10	ENSGT01090000260070.C.a #11	ENSGT00390000017974.nb #12	ENSGT00950000183031.A.a.a #13	ENSGT00940000165372 #14	ENSGT00390000005813 #15	ENSGT00950000183028.a.b.a #16	ENSGT00940000158871 #17	ENSGT00810000125524 #18	ENSGT00390000003012 #19	ENSGT00940000156553 #20	ENSGT00940000159398 #21	ENSGT00950000182941.a.a.b.e.a.b #22	ENSGT00950000183163.a.a.ab #23	ENSGT00940000160627 #24	ENSGT00940000154096.b.b.b.b.b #25	ENSGT00950000182986.b #26	ENSGT00390000004808.e #27	ENSGT00940000166129 #28	ENSGT00390000001737 #29	ENSGT00940000158915 #30	ENSGT00940000159465 #31	ENSGT00940000155107.a.a.a #32	ENSGT00990000204035 #33	ENSGT00940000156762 #35	ENSGT00940000157291 #36	ENSGT00390000015364.b #37	ENSGT00390000016054.b.i
Japanese Medaka HdrR	MODERN SPECIES	7	cnr2 (ENSORLG00000014779) #8	akirin1 (ENSORLG00000014770) #9	rhbdl2 (ENSORLG00000014754) #10	GJA9 (ENSORLG00000022080) #11	MYCBP (ENSORLG00000024478) #12	rragca (ENSORLG00000014739) #13	pou3f1 (ENSORLG00000014708) #14	utp11 (ENSORLG00000014702) #15	ENSORLG00000021906	FHL3 (ENSORLG00000014671) #16	rspo1 (ENSORLG00000014653) #17	gnl2 (ENSORLG00000014645) #18	ENSORLG00000014620 #19	SNIP1 (ENSORLG00000014602) #20	ENSORLG00000014582 #21	MAP7D1 (ENSORLG00000014562) #22	THRAP3 (ENSORLG00000014550) #23	sh3d21 (ENSORLG00000014532) #24	eva1ba (ENSORLG00000014522) #25	STK40 (ENSORLG00000014517) #26	OSCP1 (ENSORLG00000014500) #27	ENSORLG00000028871 #28	mrps15 (ENSORLG00000014487) #29	CSF3R (ENSORLG00000014472) #30	ENSORLG00000026090	GRIK3 (ENSORLG00000014461) #31	ZC3H12A (ENSORLG00000014448) #32	INPP5B (ENSORLG00000014438) #35	mtf1 (ENSORLG00000014411) #36	yrdc (ENSORLG00000014393) #37	MANEAL (ENSORLG00000014388)
Chinese medaka	MODERN SPECIES	1121									utp11 (ENSOSIG00000008439) #15	FHL3 (ENSOSIG00000008444) #16	rspo1 (ENSOSIG00000008445) #17	gnl2 (ENSOSIG00000008451) #18	dnali1 (ENSOSIG00000008453) #19	SNIP1 (ENSOSIG00000008454) #20	ENSOSIG00000008457 #21	MAP7D1 (ENSOSIG00000008559) #22	THRAP3 (ENSOSIG00000008565) #23	sh3d21 (ENSOSIG00000008569) #24	eva1ba (ENSOSIG00000008574) #25	STK40 (ENSOSIG00000008577) #26	OSCP1 (ENSOSIG00000008586) #27	ENSOSIG00000008733 #28	mrps15 (ENSOSIG00000008734) #29	csf3r (ENSOSIG00000008736) #30	GRIK3 (ENSOSIG00000008739) #31	ENSOSIG00000011075	ZC3H12A (ENSOSIG00000011076) #32	ENSOSIG00000011078 #33	INPP5B (ENSOSIG00000011093) #35	mtf1 (ENSOSIG00000012847) #36	yrdc (ENSOSIG00000012916) #37
Tiger tail seahorse	MODERN SPECIES	319										FHL3 (ENSHCOG00000012021) #16	rspo1 (ENSHCOG00000012060) #17	gnl2 (ENSHCOG00000012109) #18	dnali1 (ENSHCOG00000012126) #19	SNIP1 (ENSHCOG00000012146) #20	ENSHCOG00000012157 #21	MAP7D1 (ENSHCOG00000012178) #22	sh3d21 (ENSHCOG00000012205) #24
Pinecone sodierfish	MODERN SPECIES	7	pnrc2 (ENSMMDG00005017854) #7	cnr2 (ENSMMDG00005017851) #8	akirin1 (ENSMMDG00005017848) #9	rhbdl2 (ENSMMDG00005017845) #10	GJA9 (ENSMMDG00005017842) #11	MYCBP (ENSMMDG00005017840) #12	rragca (ENSMMDG00005017838) #13	pou3f1 (ENSMMDG00005017837) #14	utp11 (ENSMMDG00005017835) #15	FHL3 (ENSMMDG00005017832) #16	rspo1 (ENSMMDG00005017827) #17	gnl2 (ENSMMDG00005017817) #18	dnali1 (ENSMMDG00005017815) #19	snip1 (ENSMMDG00005017814)	MAP3K6 (ENSMMDG00005015884) #21	MAP7D1 (ENSMMDG00005015855) #22	THRAP3 (ENSMMDG00005015833) #23	sh3d21 (ENSMMDG00005015819) #24	eva1ba (ENSMMDG00005015816) #25	STK40 (ENSMMDG00005015813) #26	OSCP1 (ENSMMDG00005015784) #27	ENSMMDG00005015782	mrps15 (ENSMMDG00005015781) #29	csf3r (ENSMMDG00005015763) #30	GRIK3 (ENSMMDG00005015674) #31	ENSMMDG00005015659	ZC3H12A (ENSMMDG00005015627) #32	INPP5B (ENSMMDG00005013409) #35	mtf1 (ENSMMDG00005013384) #36	yrdc (ENSMMDG00005013382) #37	MANEAL (ENSMMDG00005013381)
Protacanthopterygii	ANCESTRAL SPECIES	50								ENSGT00940000165372 #14	ENSGT00390000005813 #15	ENSGT00950000183028.a.b.a #16	ENSGT00940000158871 #17	ENSGT00810000125524 #18	ENSGT00390000003012 #19	ENSGT00940000156553 #20	ENSGT00940000159398 #21	ENSGT00950000182941.a.a.b.e.a.b #22	ENSGT01010000223313	ENSGT00940000156318.b.b	ENSGT00940000154063.C.a.a.b	ENSGT00950000183163.a.a.ab #23	ENSGT00940000160627 #24	ENSGT00940000154096.b.b.b.b.b #25	ENSGT00950000182986.b #26	ENSGT00390000004808.e #27	ENSGT01030000235168	ENSGT00390000001737 #29	ENSGT00940000158915 #30	ENSGT00940000159465 #31	ENSGT00940000155107.a.a.a #32	ENSGT00990000203803 #34	ENSGT00940000156762 #35
Salmoninae	DUPLICATION
Salmoninae	ANCESTRAL SPECIES	85	ENSGT00530000063881.a.b.s #7	ENSGT01060000248564.a.b.f #8	ENSGT00940000158787.g.a #9	ENSGT00940000159442.c #10	ENSGT01090000260070.C.a.d #11	ENSGT00390000017974.nb.c #12	ENSGT00950000183031.A.a.a.a.a #13	ENSGT00940000165372.c #14	ENSGT00390000005813.i #15	ENSGT00950000183028.a.b.a.e #16	ENSGT00940000158871.c #17	ENSGT00810000125524.c #18	ENSGT00390000003012 #19	ENSGT00940000156553.g #20	ENSGT00940000159398.d #21	ENSGT00950000182941.a.a.b.e.a.b.e #22	ENSGT00940000154063.C.a.a.b.j.a	ENSGT00950000183163.a.a.ab.c #23	ENSGT00940000160627.k #24	ENSGT00940000154096.b.b.b.b.b.b #25	ENSGT00950000182986.b.d #26	ENSGT00390000004808.e.b #27	ENSGT00390000001737.p #29	ENSGT00940000158915.ab.a #30	ENSGT00940000159465.c.a #31	ENSGT00940000155107.a.a.a.a #32	ENSGT00990000203803.c #34	ENSGT00940000156762.i #35	ENSGT00940000157291.j.b #36	ENSGT00390000015364.b.m #37	ENSGT00390000016054.b.i
Huchen	DUPLICATION
Huchen	MODERN SPECIES	193	cnr2 (ENSHHUG00000024447) #8	akirin1 (ENSHHUG00000024422) #9	rhbdl2 (ENSHHUG00000024388) #10	GJA9 (ENSHHUG00000024386) #11	ENSHHUG00000024370 #12	rragca (ENSHHUG00000024334) #13	pou3f1 (ENSHHUG00000024330) #14	utp11 (ENSHHUG00000024320) #15	FHL3 (ENSHHUG00000024316) #16	rspo1 (ENSHHUG00000024308) #17	ENSHHUG00000024306	gnl2 (ENSHHUG00000024270) #18	dnali1 (ENSHHUG00000024268) #19	SNIP1 (ENSHHUG00000039761) #20	MAP3K6 (ENSHHUG00000039558) #21	MAP7D1 (ENSHHUG00000039548) #22	ENSHHUG00000039543 #22	ENSHHUG00000039517	THRAP3 (ENSHHUG00000039505) #23	sh3d21 (ENSHHUG00000039486) #24	eva1ba (ENSHHUG00000039481) #25	STK40 (ENSHHUG00000039465) #26	ENSHHUG00000039453	OSCP1 (ENSHHUG00000039437) #27	ENSHHUG00000039417	csf3r (ENSHHUG00000039373) #30	GRIK3 (ENSHHUG00000039209) #31	ZC3H12A (ENSHHUG00000039189) #32	ENSHHUG00000039165 #34	INPP5B (ENSHHUG00000039010) #35	mtf1 (ENSHHUG00000038992) #36
Huchen	MODERN SPECIES	193	akirin1 (ENSHHUG00000024422) #9	rhbdl2 (ENSHHUG00000024388) #10	GJA9 (ENSHHUG00000024386) #11	ENSHHUG00000024370 #12	rragca (ENSHHUG00000024334) #13	pou3f1 (ENSHHUG00000024330) #14	utp11 (ENSHHUG00000024320) #15	FHL3 (ENSHHUG00000024316) #16	rspo1 (ENSHHUG00000024308) #17	ENSHHUG00000024306	gnl2 (ENSHHUG00000024270) #18	dnali1 (ENSHHUG00000024268) #19	SNIP1 (ENSHHUG00000039761) #20	MAP3K6 (ENSHHUG00000039558) #21	MAP7D1 (ENSHHUG00000039548) #22	ENSHHUG00000039543 #22	ENSHHUG00000039517	THRAP3 (ENSHHUG00000039505) #23	sh3d21 (ENSHHUG00000039486) #24	eva1ba (ENSHHUG00000039481) #25	STK40 (ENSHHUG00000039465) #26	ENSHHUG00000039453	OSCP1 (ENSHHUG00000039437) #27	ENSHHUG00000039417	csf3r (ENSHHUG00000039373) #30	GRIK3 (ENSHHUG00000039209) #31	ZC3H12A (ENSHHUG00000039189) #32	ENSHHUG00000039165 #34	INPP5B (ENSHHUG00000039010) #35	mtf1 (ENSHHUG00000038992) #36	yrdc (ENSHHUG00000038990) #37
Salmoninae_a	ANCESTRAL SPECIES	93	ENSGT00530000063881.a.b.s #7	ENSGT01060000248564.a.b.f #8	ENSGT00940000158787.g.a #9	ENSGT00940000159442.c.b #10	ENSGT01090000260070.C.a.d #11	ENSGT00390000017974.nb.c #12	ENSGT00950000183031.A.a.a.a.a #13	ENSGT00940000165372.c #14	ENSGT00390000005813.i #15	ENSGT00950000183028.a.b.a.e #16	ENSGT00940000158871.c #17	ENSGT00810000125524.c #18	ENSGT00390000003012 #19	ENSGT00940000156553.g #20	ENSGT00940000159398.d #21	ENSGT00950000182941.a.a.b.e.a.b.e #22	ENSGT00940000154063.C.a.a.b.j.a	ENSGT00950000183163.a.a.ab.c #23	ENSGT00940000160627.k #24	ENSGT00990000211290.B	ENSGT00940000154096.b.b.b.b.b.b #25	ENSGT00950000182986.b.d #26	ENSGT00390000004808.e.b #27	ENSGT01030000235168.c.a	ENSGT00390000001737.p #29	ENSGT00940000158915.ab.a #30	ENSGT00940000159465.c.a #31	ENSGT00940000155107.a.a.a.a #32	ENSGT00990000203803.c #34	ENSGT00940000156762.i #35	ENSGT00940000157291.j.b #36
Salmo	ANCESTRAL SPECIES	32	ENSGT00530000063881.a.b.s #7	ENSGT01060000248564.a.b.f #8	ENSGT00940000158787.g.a #9	ENSGT00940000159442.c.b #10	ENSGT01090000260070.C.a.d #11	ENSGT00390000017974.nb.c #12	ENSGT00950000183031.A.a.a.a.a #13	ENSGT00940000165372.c #14	ENSGT00390000005813.i #15	ENSGT00950000183028.a.b.a.e #16	ENSGT00940000158871.c #17	ENSGT00810000125524.c #18	ENSGT00390000003012 #19	ENSGT00940000156553.g #20	ENSGT00940000159398.d #21	ENSGT00950000182941.a.a.b.e.a.b.e #22	ENSGT00940000154063.C.a.a.b.j.a	ENSGT00950000183163.a.a.ab.c #23	ENSGT00940000160627.k #24	ENSGT00990000211290.B	ENSGT00940000154096.b.b.b.b.b.b #25	ENSGT00950000182986.b.d #26	ENSGT00390000004808.e.b #27	ENSGT01030000235168.d	ENSGT00390000001737.p #29	ENSGT00940000158915.ab.a #30	ENSGT00940000159465.c.a #31	ENSGT00940000155107.a.a.a.a #32	ENSGT00990000203803.c #34	ENSGT00940000156762.i #35	ENSGT00940000157291.j.b #36
Atlantic salmon	MODERN SPECIES	11	ENSSSAG00000074665	SRSF10 (ENSSSAG00000092388)	cnr2 (ENSSSAG00000042370) #8	akirin1 (ENSSSAG00000028046) #9	rhbdl2 (ENSSSAG00000042235) #10	GJA9 (ENSSSAG00000086489) #11	MYCBP (ENSSSAG00000111295) #12	rragc (ENSSSAG00000029084) #13	utp11 (ENSSSAG00000029460) #15	FHL3 (ENSSSAG00000110756) #16	rspo1 (ENSSSAG00000029819) #17	gnl2 (ENSSSAG00000030089) #18	dnali1 (ENSSSAG00000030760) #19	SNIP1 (ENSSSAG00000031003) #20	ENSSSAG00000031511 #21	MAP7D1 (ENSSSAG00000040212) #22	ENSSSAG00000040460	THRAP3 (ENSSSAG00000041257) #23	sh3d21 (ENSSSAG00000039492) #24	ENSSSAG00000041298	eva1ba (ENSSSAG00000097911) #25	STK40 (ENSSSAG00000100035) #26	OSCP1 (ENSSSAG00000041394) #27	mrps15 (ENSSSAG00000041549) #29	CSF3R (ENSSSAG00000041566) #30	GRIK3 (ENSSSAG00000041700) #31	ZC3H12A (ENSSSAG00000047150) #32	ENSSSAG00000114064 #34	INPP5B (ENSSSAG00000047240) #35	mtf1 (ENSSSAG00000051914) #36	yrdc (ENSSSAG00000051953) #37
River trout	MODERN SPECIES	30	cnr2 (ENSSTUG00000043585) #8	akirin1 (ENSSTUG00000043595) #9	rhbdl2 (ENSSTUG00000043631) #10	GJA9 (ENSSTUG00000043643) #11	ENSSTUG00000043663 #12	rragca (ENSSTUG00000043681) #13	pou3f1 (ENSSTUG00000043698) #14	utp11 (ENSSTUG00000043702) #15	FHL3 (ENSSTUG00000043720) #16	rspo1 (ENSSTUG00000043724) #17	ENSSTUG00000043729	gnl2 (ENSSTUG00000043753) #18	dnali1 (ENSSTUG00000043924) #19	SNIP1 (ENSSTUG00000043947) #20	MAP3K6 (ENSSTUG00000043972) #21	MAP7D1 (ENSSTUG00000044228) #22	ENSSTUG00000044325	THRAP3 (ENSSTUG00000044338) #23	sh3d21 (ENSSTUG00000044407) #24	ENSSTUG00000044433	eva1ba (ENSSTUG00000044439) #25	STK40 (ENSSTUG00000044443) #26	OSCP1 (ENSSTUG00000044465) #27	ENSSTUG00000044527	mrps15 (ENSSTUG00000044540) #29	csf3r (ENSSTUG00000044555) #30	GRIK3 (ENSSTUG00000044620) #31	ZC3H12A (ENSSTUG00000045847) #32	INPP5B (ENSSTUG00000045888) #35	mtf1 (ENSSTUG00000046336) #36	yrdc (ENSSTUG00000046359) #37
Oncorhynchus	ANCESTRAL SPECIES	3	ENSGT00530000063881.a.b.s #7	ENSGT01060000248564.a.b.f #8	ENSGT00940000158787.g.a #9	ENSGT00940000159442.d #10	ENSGT01090000260070.C.a.d #11	ENSGT00390000017974.nb.c #12	ENSGT00950000183031.A.a.a.a.a #13	ENSGT00940000165372.c #14	ENSGT00390000005813.i #15	ENSGT00950000183028.a.b.a.e #16	ENSGT00940000158871.c #17	ENSGT00810000125524.c #18	ENSGT00390000003012.l.a #19	ENSGT00940000156553.g #20	ENSGT00940000159398.d #21	ENSGT00950000182941.a.a.b.e.a.b.e #22	ENSGT00940000154063.C.a.a.b.j.a	ENSGT00950000183163.a.a.ab.c #23	ENSGT00940000160627.k #24	ENSGT00990000211290.B	ENSGT00940000154096.b.b.b.b.b.b #25	ENSGT00950000182986.b.d #26	ENSGT00390000004808.e.b #27	ENSGT01030000235168.c.a	ENSGT00390000001737.p #29	ENSGT00940000158915.ab.a #30	ENSGT00940000159465.c.a #31	ENSGT00940000155107.a.a.a.a #32	ENSGT00990000203803.c #34	ENSGT00940000156762.i #35	ENSGT00940000157291.j.b #36
Rainbow trout	MODERN SPECIES	21	pnrc2 (ENSOMYG00000009031) #7	cnr2 (ENSOMYG00000009045) #8	akirin1 (ENSOMYG00000009097) #9	ENSOMYG00000009147 #12	rragca (ENSOMYG00000009167) #13	ENSOMYG00000071645	pou3f1 (ENSOMYG00000009181) #14	utp11 (ENSOMYG00000009193) #15	FHL3 (ENSOMYG00000009234) #16	rspo1 (ENSOMYG00000009271) #17	ENSOMYG00000002892	gnl2 (ENSOMYG00000009355) #18	dnali1 (ENSOMYG00000009575) #19	SNIP1 (ENSOMYG00000009635) #20	ENSOMYG00000009719 #21	MAP7D1 (ENSOMYG00000009849) #22	ENSOMYG00000073482	ENSOMYG00000009890	THRAP3 (ENSOMYG00000009930) #23	sh3d21 (ENSOMYG00000009987) #24	ENSOMYG00000062962	ENSOMYG00000010013	eva1ba (ENSOMYG00000010031) #25	ENSOMYG00000069582	STK40 (ENSOMYG00000010073) #26	OSCP1 (ENSOMYG00000010242) #27	mrps15 (ENSOMYG00000010362) #29	csf3r (ENSOMYG00000010394) #30	GRIK3 (ENSOMYG00000010580) #31	ZC3H12A (ENSOMYG00000011243) #32	ENSOMYG00000011247 #34
Oncorhynchus_a	ANCESTRAL SPECIES	8	ENSGT00530000063881.a.b.s #7	ENSGT01060000248564.a.b.f #8	ENSGT00940000158787.g.a #9	ENSGT00940000159442.c.b #10	ENSGT01090000260070.C.a.d #11	ENSGT00390000017974.nb.c #12	ENSGT00950000183031.A.a.a.a.a #13	ENSGT00940000165372.c #14	ENSGT00390000005813.i #15	ENSGT00950000183028.a.b.a.e #16	ENSGT00940000158871.c #17	ENSGT00810000125524.c #18	ENSGT00390000003012.l.a #19	ENSGT00940000156553.g #20	ENSGT00940000159398.d #21	ENSGT00950000182941.a.a.b.e.a.b.e #22	ENSGT00940000154063.C.a.a.b.j.a	ENSGT00950000183163.a.a.ab.c #23	ENSGT00940000160627.k #24	ENSGT00990000211290.B	ENSGT00940000154096.b.b.b.b.b.b #25	ENSGT00950000182986.b.d #26	ENSGT00390000004808.e.b #27	ENSGT01030000235168.c.a	ENSGT00390000001737.p #29	ENSGT00940000158915.ab.a #30	ENSGT00940000159465.c.a #31	ENSGT00940000155107.a.a.a.a #32	ENSGT00990000203803.c #34	ENSGT00940000156762.i #35	ENSGT00940000157291.j.b #36
Chinook salmon	DUPLICATION
Chinook salmon	DUPLICATION
Chinook salmon	MODERN SPECIES	22	dhdds (ENSOTSG00005005996)	ENSOTSG00005005997	fam110d (ENSOTSG00005006000)	SLC9A1 (ENSOTSG00005006007)	ENSOTSG00005006123	ENSOTSG00005006142	ENSOTSG00005007950	pou3f1 (ENSOTSG00005007951) #14	utp11 (ENSOTSG00005007952) #15	FHL3 (ENSOTSG00005007953) #16	rspo1 (ENSOTSG00005007954) #17	gnl2 (ENSOTSG00005007955) #18	dnali1 (ENSOTSG00005007956) #19	SNIP1 (ENSOTSG00005007957) #20	ENSOTSG00005007960 #21	MAP7D1 (ENSOTSG00005008519) #22	ENSOTSG00005008523	THRAP3 (ENSOTSG00005008526) #23	sh3d21 (ENSOTSG00005008530) #24	eva1ba (ENSOTSG00005008534) #25	STK40 (ENSOTSG00005008536) #26	OSCP1 (ENSOTSG00005008539) #27	ENSOTSG00005008583	mrps15 (ENSOTSG00005008585) #29	csf3r (ENSOTSG00005008586) #30	GRIK3 (ENSOTSG00005008615) #31	ZC3H12A (ENSOTSG00005011535) #32	ENSOTSG00005011536 #34	INPP5B (ENSOTSG00005011544) #35	mtf1 (ENSOTSG00005012824) #36	yrdc (ENSOTSG00005000054) #37
Chinook salmon	MODERN SPECIES	2926								pou3f1 (ENSOTSG00005029284) #14	utp11 (ENSOTSG00005029286) #15	FHL3 (ENSOTSG00005029287) #16	rspo1 (ENSOTSG00005029290) #17	gnl2 (ENSOTSG00005029292) #18	dnali1 (ENSOTSG00005029295) #19	SNIP1 (ENSOTSG00005029299) #20	ENSOTSG00005029304 #21	MAP7D1 (ENSOTSG00005029313) #22	ENSOTSG00005029324	THRAP3 (ENSOTSG00005029326) #23	sh3d21 (ENSOTSG00005029328) #24	eva1ba (ENSOTSG00005029329) #25	STK40 (ENSOTSG00005029330) #26	OSCP1 (ENSOTSG00005029336) #27	mrps15 (ENSOTSG00005029450) #29	ENSOTSG00005029451	csf3r (ENSOTSG00005029452) #30	GRIK3 (ENSOTSG00005029467) #31	ZC3H12A (ENSOTSG00005033079) #32	ENSOTSG00005033081 #34	INPP5B (ENSOTSG00005033083) #35	mtf1 (ENSOTSG00005033088) #36	yrdc (ENSOTSG00005033091) #37
Chinook salmon	MODERN SPECIES	22	WDR26 (ENSOTSG00005002078)	CNIH4 (ENSOTSG00005002066)	ENSOTSG00005002063	CALHM5 (ENSOTSG00005002062)	calhm6 (ENSOTSG00005002060)	klhl32 (ENSOTSG00005002042)	mms22l (ENSOTSG00005002033)	pou3f1 (ENSOTSG00005002026) #14	utp11 (ENSOTSG00005002023) #15	FHL3 (ENSOTSG00005002021) #16	rspo1 (ENSOTSG00005002019) #17	gnl2 (ENSOTSG00005002018) #18	dnali1 (ENSOTSG00005002016) #19	SNIP1 (ENSOTSG00005002012) #20	ENSOTSG00005000717 #21	MAP7D1 (ENSOTSG00005011384) #22	ENSOTSG00005011382	THRAP3 (ENSOTSG00005011377) #23	sh3d21 (ENSOTSG00005011372) #24	eva1ba (ENSOTSG00005011369) #25	STK40 (ENSOTSG00005011356) #26	OSCP1 (ENSOTSG00005011313) #27	ENSOTSG00005011310	mrps15 (ENSOTSG00005011308) #29	csf3r (ENSOTSG00005011303) #30	GRIK3 (ENSOTSG00005007874) #31	ZC3H12A (ENSOTSG00005007864) #32	ENSOTSG00005007863 #34	INPP5B (ENSOTSG00005007623) #35	mtf1 (ENSOTSG00005007615) #36	yrdc (ENSOTSG00005007612) #37
Coho salmon	MODERN SPECIES	11	cnr2 (ENSOKIG00005017757) #8	akirin1 (ENSOKIG00005017768) #9	rhbdl2 (ENSOKIG00005017791) #10	GJA9 (ENSOKIG00005017806) #11	ENSOKIG00005017810 #12	rragca (ENSOKIG00005017823) #13	ENSOKIG00005017835	pou3f1 (ENSOKIG00005017836) #14	utp11 (ENSOKIG00005017841) #15	FHL3 (ENSOKIG00005017877) #16	rspo1 (ENSOKIG00005017887) #17	gnl2 (ENSOKIG00005017905) #18	dnali1 (ENSOKIG00005017939) #19	SNIP1 (ENSOKIG00005017975) #20	ENSOKIG00005018009 #21	MAP7D1 (ENSOKIG00005018595) #22	ENSOKIG00005018600	THRAP3 (ENSOKIG00005018602) #23	sh3d21 (ENSOKIG00005018614) #24	ENSOKIG00005018636	eva1ba (ENSOKIG00005018655) #25	STK40 (ENSOKIG00005018666) #26	OSCP1 (ENSOKIG00005018695) #27	mrps15 (ENSOKIG00005018782) #29	csf3r (ENSOKIG00005018820) #30	GRIK3 (ENSOKIG00005018849) #31	ZC3H12A (ENSOKIG00005018878) #32	ENSOKIG00005018888 #34	INPP5B (ENSOKIG00005018928) #35	mtf1 (ENSOKIG00005019448) #36	yrdc (ENSOKIG00005019460) #37
Salmoninae	ANCESTRAL SPECIES	85	ENSGT00530000063881.a.b.t #7	ENSGT01060000248564.a.b.e #8	ENSGT00940000158787.g.b #9	ENSGT00940000159442.d #10	ENSGT01090000260070.C.a.c #11	ENSGT00390000017974.nb.d #12	ENSGT00950000183031.A.a.a.a.b #13	ENSGT00940000165372.d #14	ENSGT00390000005813.j #15	ENSGT00950000183028.a.b.a.f #16	ENSGT00940000158871.d #17	ENSGT00810000125524.d #18	ENSGT00940000179482	ENSGT00940000156553.h #20	ENSGT00940000159398.c #21	ENSGT00950000182941.a.a.b.e.a.b.f #22	ENSGT00940000154063.C.a.a.b.j.b	ENSGT00950000183163.a.a.ab.d #23	ENSGT00940000160627.l #24	ENSGT00940000154096.b.b.b.b.b.a #25	ENSGT00950000182986.b.c #26	ENSGT00390000004808.e.a #27	ENSGT01030000235168.c.b	ENSGT00390000001737.o #29	ENSGT00940000158915.ab.b #30	ENSGT00940000159465.d #31	ENSGT00940000155107.a.a.a.b #32	ENSGT00990000203803.d #34	ENSGT00940000156762.j #35	ENSGT00940000157291.j.a #36	ENSGT00390000015364.b.n #37
Salmoninae_a	ANCESTRAL SPECIES	39	ENSGT00530000063881.a.b.t #7	ENSGT01060000248564.a.b.e #8	ENSGT00940000158787.g.b #9	ENSGT00940000159442.d #10	ENSGT01090000260070.C.a.c #11	ENSGT00390000017974.nb.d #12	ENSGT00950000183031.A.a.a.a.b #13	ENSGT00940000165372.d #14	ENSGT00390000005813.j #15	ENSGT00950000183028.a.b.a.f #16	ENSGT00940000158871.d #17	ENSGT00810000125524.d #18	ENSGT00940000179482	ENSGT00940000156553.h #20	ENSGT00940000159398.c #21	ENSGT00950000182941.a.a.b.e.a.b.f #22	ENSGT00940000154063.C.a.a.b.j.b	ENSGT00950000183163.a.a.ab.d #23	ENSGT00940000160627.l #24	ENSGT00990000211290.A	ENSGT00940000154096.b.b.b.b.b.a #25	ENSGT00950000182986.b.c #26	ENSGT00390000004808.e.a #27	ENSGT01030000235168.c.b	ENSGT00390000001737.o #29	ENSGT00940000158915.ab.b #30	ENSGT00940000159465.d #31	ENSGT00940000155107.a.a.a.b #32	ENSGT00990000203803.d #34	ENSGT00940000156762.j #35	ENSGT00940000157291.j.a #36
Oncorhynchus	ANCESTRAL SPECIES	38	ENSGT00530000063881.a.b.t #7	ENSGT01060000248564.a.b.e #8	ENSGT00940000158787.g.b #9	ENSGT00940000159442.c.a #10	ENSGT01090000260070.C.a.c #11	ENSGT00390000017974.nb.d #12	ENSGT00950000183031.A.a.a.a.b #13	ENSGT00940000165372.d #14	ENSGT00390000005813.j #15	ENSGT00950000183028.a.b.a.f #16	ENSGT00940000158871.d #17	ENSGT00810000125524.d #18	ENSGT00940000179482	ENSGT00940000156553.h #20	ENSGT00940000159398.c #21	ENSGT00950000182941.a.a.b.e.a.b.f #22	ENSGT00940000154063.C.a.a.b.j.b.d	ENSGT00940000154063.C.a.a.b.j.b.c	ENSGT00950000183163.a.a.ab.d #23	ENSGT00940000160627.l #24	ENSGT00990000211290.A	ENSGT00940000154096.b.b.b.b.b.a #25	ENSGT00950000182986.b.c #26	ENSGT00390000004808.e.a #27	ENSGT01030000235168.c.b	ENSGT00390000001737.o #29	ENSGT00940000158915.ab.b #30	ENSGT00940000159465.d #31	ENSGT00940000155107.a.a.a.b #32	ENSGT00990000203803.d #34	ENSGT00940000156762.j #35
Oncorhynchus_a	ANCESTRAL SPECIES	127								ENSGT00940000165372.d #14	ENSGT00390000005813.j #15	ENSGT00950000183028.a.b.a.f #16	ENSGT00940000158871.d #17	ENSGT00810000125524.d #18	ENSGT00940000179482	ENSGT00940000156553.h #20	ENSGT00940000159398.c #21	ENSGT00950000182941.a.a.b.e.a.b.f #22	ENSGT00940000154063.C.a.a.b.j.b.d	ENSGT00940000154063.C.a.a.b.j.b.c	ENSGT00950000183163.a.a.ab.d #23	ENSGT00940000160627.l #24	ENSGT00990000211290.A	ENSGT00940000154096.b.b.b.b.b.a #25	ENSGT00950000182986.b.c #26	ENSGT00390000004808.e.a #27	ENSGT01030000235168.c.b	ENSGT00390000001737.o #29	ENSGT00940000158915.ab.b #30	ENSGT00940000159465.d #31	ENSGT00940000155107.a.a.a.b #32	ENSGT00990000203803.d #34	ENSGT00940000156762.j #35
Chinook salmon	DUPLICATION
Chinook salmon	MODERN SPECIES	2914	cnr2 (ENSOTSG00005030388) #8	akirin1 (ENSOTSG00005030319) #9	rhbdl2 (ENSOTSG00005030317) #10	GJA9 (ENSOTSG00005030316) #11	ENSOTSG00005030315 #12	rragca (ENSOTSG00005030314) #13	ENSOTSG00005030313	pou3f1 (ENSOTSG00005030312) #14	utp11 (ENSOTSG00005030311) #15	FHL3 (ENSOTSG00005030310) #16	rspo1 (ENSOTSG00005030309) #17	gnl2 (ENSOTSG00005030301) #18	ENSOTSG00005030258	SNIP1 (ENSOTSG00005030257) #20	ENSOTSG00005030207 #21	MAP7D1 (ENSOTSG00005030200) #22	ENSOTSG00005030197	ENSOTSG00005030117	THRAP3 (ENSOTSG00005030112) #23	sh3d21 (ENSOTSG00005030111) #24	ENSOTSG00005030110	eva1ba (ENSOTSG00005030108) #25	STK40 (ENSOTSG00005030106) #26	OSCP1 (ENSOTSG00005030103) #27	ENSOTSG00005030101	mrps15 (ENSOTSG00005030100) #29	ENSOTSG00005030098 #30	GRIK3 (ENSOTSG00005026887) #31	ZC3H12A (ENSOTSG00005026883) #32	ENSOTSG00005026882 #34	INPP5B (ENSOTSG00005026202) #35
Chinook salmon	MODERN SPECIES	15	akirin1 (ENSOTSG00005023721) #9	rhbdl2 (ENSOTSG00005023724) #10	GJA9 (ENSOTSG00005023725) #11	ENSOTSG00005002623	rragca (ENSOTSG00005002634) #13	ENSOTSG00005002863	pou3f1 (ENSOTSG00005003033) #14	utp11 (ENSOTSG00005003113) #15	FHL3 (ENSOTSG00005003210) #16	ENSOTSG00005003212	rspo1 (ENSOTSG00005003214) #17	gnl2 (ENSOTSG00005003221) #18	ENSOTSG00005003337	SNIP1 (ENSOTSG00005003366) #20	ENSOTSG00005003369 #21	MAP7D1 (ENSOTSG00005003383) #22	ENSOTSG00005003397	ENSOTSG00005003401	THRAP3 (ENSOTSG00005003479) #23	sh3d21 (ENSOTSG00005003486) #24	ENSOTSG00005003493	eva1ba (ENSOTSG00005003495) #25	STK40 (ENSOTSG00005003497) #26	OSCP1 (ENSOTSG00005003499) #27	ENSOTSG00005003502	mrps15 (ENSOTSG00005003503) #29	GRIK3 (ENSOTSG00005003513) #31	ZC3H12A (ENSOTSG00005004525) #32	ENSOTSG00005004527 #34	INPP5B (ENSOTSG00005004531) #35	mtf1 (ENSOTSG00005006701) #36
Coho salmon	MODERN SPECIES	4	akirin1 (ENSOKIG00005013285) #9	rhbdl2 (ENSOKIG00005013262) #10	GJA9 (ENSOKIG00005013255) #11	ENSOKIG00005013247 #12	rragca (ENSOKIG00005013221) #13	ENSOKIG00005013216	pou3f1 (ENSOKIG00005013212) #14	utp11 (ENSOKIG00005013205) #15	FHL3 (ENSOKIG00005013194) #16	rspo1 (ENSOKIG00005013187) #17	gnl2 (ENSOKIG00005012985) #18	ENSOKIG00005012932	SNIP1 (ENSOKIG00005012923) #20	MAP3K6 (ENSOKIG00005012344) #21	ENSOKIG00005012292	MAP7D1 (ENSOKIG00005012228) #22	ENSOKIG00005012207	THRAP3 (ENSOKIG00005012188) #23	sh3d21 (ENSOKIG00005012171) #24	ENSOKIG00005012134	eva1ba (ENSOKIG00005012126) #25	STK40 (ENSOKIG00005012106) #26	ENSOKIG00005012100	ENSOKIG00005012097	OSCP1 (ENSOKIG00005012056) #27	ENSOKIG00005012040	mrps15 (ENSOKIG00005012017) #29	ENSOKIG00005011934 #30	GRIK3 (ENSOKIG00005010276) #31	ZC3H12A (ENSOKIG00005010157) #32	ENSOKIG00005010146 #34
Rainbow trout	MODERN SPECIES	11	cnr2 (ENSOMYG00000036009) #8	akirin1 (ENSOMYG00000036028) #9	rhbdl2 (ENSOMYG00000036043) #10	GJA9 (ENSOMYG00000036049) #11	MYCBP (ENSOMYG00000036056) #12	rragca (ENSOMYG00000036070) #13	pou3f1 (ENSOMYG00000036081) #14	utp11 (ENSOMYG00000036096) #15	FHL3 (ENSOMYG00000036105) #16	rspo1 (ENSOMYG00000036112) #17	ENSOMYG00000074317	gnl2 (ENSOMYG00000036245) #18	ENSOMYG00000037484 #20	ENSOMYG00000047915	ENSOMYG00000037595 #21	MAP7D1 (ENSOMYG00000038006) #22	ENSOMYG00000038040	ENSOMYG00000050329	ENSOMYG00000038029	ENSOMYG00000063060	THRAP3 (ENSOMYG00000038051) #23	sh3d21 (ENSOMYG00000038065) #24	eva1ba (ENSOMYG00000055958) #25	STK40 (ENSOMYG00000038106) #26	ENSOMYG00000038134	ENSOMYG00000070784	ENSOMYG00000038157	mrps15 (ENSOMYG00000038191) #29	ENSOMYG00000054305	GRIK3 (ENSOMYG00000027368) #31	ZC3H12A (ENSOMYG00000031296) #32
Salmo	ANCESTRAL SPECIES	1	ENSGT00940000154450.uc.c	ENSGT00530000063881.a.b.t #7	ENSGT01060000248564.a.b.e #8	ENSGT00940000158787.g.b #9	ENSGT00940000159442.d #10	ENSGT01090000260070.C.a.c #11	ENSGT00980000199494.a.b	ENSGT00950000183031.A.a.a.a.b #13	ENSGT00940000165372.d #14	ENSGT00390000005813.j #15	ENSGT00950000183028.a.b.a.f #16	ENSGT00940000158871.d #17	ENSGT00810000125524.d #18	ENSGT00940000156553.h #20	ENSGT00940000159398.c #21	ENSGT00950000182941.a.a.b.e.a.b.f #22	ENSGT00940000154063.C.a.a.b.j.b.b	ENSGT00950000183163.a.a.ab.d #23	ENSGT00940000160627.l #24	ENSGT00990000211290.A	ENSGT00940000154096.b.b.b.b.b.a #25	ENSGT00950000182986.b.c #26	ENSGT00390000004808.e.a #27	ENSGT00390000001737.o #29	ENSGT00940000158915.ab.b #30	ENSGT00940000159465.c.b.b #31	ENSGT00940000155107.a.a.a.b #32	ENSGT00990000203803.d #34	ENSGT00940000156762.j #35	ENSGT00940000157291.j.a #36	ENSGT00990000213494
River trout	MODERN SPECIES	22	SRSF10 (ENSSTUG00000029650)	pnrc2 (ENSSTUG00000029646) #7	cnr2 (ENSSTUG00000029643) #8	akirin1 (ENSSTUG00000029596) #9	rhbdl2 (ENSSTUG00000029559) #10	GJA9 (ENSSTUG00000029550) #11	ENSSTUG00000029536	rragca (ENSSTUG00000029518) #13	pou3f1 (ENSSTUG00000029513) #14	utp11 (ENSSTUG00000029502) #15	FHL3 (ENSSTUG00000029489) #16	rspo1 (ENSSTUG00000029480) #17	gnl2 (ENSSTUG00000029330) #18	SNIP1 (ENSSTUG00000029312) #20	ENSSTUG00000029010 #21	MAP7D1 (ENSSTUG00000028932) #22	ENSSTUG00000028926	fam177a1 (ENSSTUG00000028915)	fam177a1 (ENSSTUG00000028906)	ENSSTUG00000028899	ENSSTUG00000028878	THRAP3 (ENSSTUG00000028821) #23	sh3d21 (ENSSTUG00000028799) #24	eva1ba (ENSSTUG00000028783) #25	STK40 (ENSSTUG00000028762) #26	OSCP1 (ENSSTUG00000028650) #27	mrps15 (ENSSTUG00000028606) #29	ENSSTUG00000010809	GRIK3 (ENSSTUG00000008608) #31	ZC3H12A (ENSSTUG00000008510) #32	ENSSTUG00000008498 #34
Atlantic salmon	MODERN SPECIES	24	pnrc2 (ENSSSAG00000100053) #7	cnr2 (ENSSSAG00000027960) #8	ENSSSAG00000084598	ca108 (ENSSSAG00000042312) #9	rhbdl2 (ENSSSAG00000116091) #10	GJA9 (ENSSSAG00000108800) #11	ENSSSAG00000107037	rragca (ENSSSAG00000042174) #13	utp11 (ENSSSAG00000042064) #15	FHL3 (ENSSSAG00000042046) #16	rspo1 (ENSSSAG00000112303) #17	gnl2 (ENSSSAG00000041915)	dnali1 (ENSSSAG00000041885) #19	ENSSSAG00000041874 #20	ENSSSAG00000041598 #21	MAP7D1 (ENSSSAG00000041522) #22	ENSSSAG00000010394	ENSSSAG00000039686	ENSSSAG00000114956	THRAP3 (ENSSSAG00000039533) #23	sh3d21 (ENSSSAG00000041288) #24	ENSSSAG00000100766	CA078 (ENSSSAG00000039398) #25	STK40 (ENSSSAG00000039079) #26	OSCP1 (ENSSSAG00000038140) #27	mrps15 (ENSSSAG00000037592) #29	csf3r (ENSSSAG00000072535) #30	GRIK3 (ENSSSAG00000070593) #31	ENSSSAG00000091521	ZC3H12A (ENSSSAG00000070519) #32	ENSSSAG00000121662 #34
Huchen	MODERN SPECIES	516								pou3f1 (ENSHHUG00000023677) #14	utp11 (ENSHHUG00000023669) #15	FHL3 (ENSHHUG00000023662) #16	rspo1 (ENSHHUG00000023657) #17	gnl2 (ENSHHUG00000023471) #18	ENSHHUG00000023458	SNIP1 (ENSHHUG00000023456) #20	MAP3K6 (ENSHHUG00000023393) #21	MAP7D1 (ENSHHUG00000023310) #22	ENSHHUG00000023305	THRAP3 (ENSHHUG00000023283) #23	sh3d21 (ENSHHUG00000023275) #24	eva1ba (ENSHHUG00000023251) #25	STK40 (ENSHHUG00000023245) #26	OSCP1 (ENSHHUG00000023235) #27	ENSHHUG00000023196	mrps15 (ENSHHUG00000023165) #29
Northern pike	MODERN SPECIES	19	SRSF10 (ENSELUG00000017108)	pnrc2 (ENSELUG00000017122) #7	cnr2 (ENSELUG00000017144) #8	rhbdl2 (ENSELUG00000017191) #10	GJA9 (ENSELUG00000017242) #11	ENSELUG00000025351 #12	rragca (ENSELUG00000017293) #13	pou3f1 (ENSELUG00000017309) #14	utp11 (ENSELUG00000017361) #15	FHL3 (ENSELUG00000000657) #16	rspo1 (ENSELUG00000017421) #17	gnl2 (ENSELUG00000000675) #18	dnali1 (ENSELUG00000000681) #19	SNIP1 (ENSELUG00000017487) #20	MAP3K6 (ENSELUG00000017546) #21	map7d1a (ENSELUG00000017646) #22	ENSELUG00000000703	ENSELUG00000017676	ENSELUG00000034553	THRAP3 (ENSELUG00000017733) #23	sh3d21 (ENSELUG00000017766) #24	eva1ba (ENSELUG00000017790) #25	STK40 (ENSELUG00000017831) #26	OSCP1 (ENSELUG00000017885) #27	PL8L1 (ENSELUG00000032488)	mrps15 (ENSELUG00000017968) #29	smpdl3b (ENSELUG00000017994)	mecr (ENSELUG00000018018)	LIN28A (ENSELUG00000018033)	MANEAL (ENSELUG00000018058)	yrdc (ENSELUG00000018071) #37
Otomorpha	ANCESTRAL SPECIES	109															ENSGT00940000159398 #21	ENSGT00950000182941.a.a.b.e.a.b #22	ENSGT00950000183163.a.a.ab #23	ENSGT00940000160627 #24	ENSGT00940000154096.b.b.b.b.b #25	ENSGT00950000182986.b #26	ENSGT00390000004808.e #27	ENSGT01030000235168	ENSGT00390000001737 #29	ENSGT00940000158915 #30	ENSGT00940000159465 #31	ENSGT00940000155107.a.a.a #32	ENSGT00990000203803 #34	ENSGT00940000156762 #35	ENSGT00940000157291 #36	ENSGT00390000015364.b #37	ENSGT00390000016054.b.i
Otophysi	ANCESTRAL SPECIES	56	ENSGT00940000157582.g	ENSGT00950000183053.A.a.b	ENSGT00940000157218.A	ENSGT01030000234623.a.a.b.a	ENSGT00990000203824	ENSGT01030000234597.b.a.b.c.b	ENSGT00940000161438	ENSGT00940000157151.c	ENSGT00940000164800	ENSGT00940000164873	ENSGT00390000002144	ENSGT00910000144179.b.b.o.a	ENSGT00530000063624.C.b	ENSGT00940000157999	ENSGT00940000159398 #21	ENSGT00950000182941.a.a.b.e.a.b #22	ENSGT00950000183163.a.a.ab #23	ENSGT00940000160627 #24	ENSGT00940000154096.b.b.b.b.b #25	ENSGT00950000182986.b #26	ENSGT00390000004808.e #27	ENSGT01030000235168	ENSGT00390000001737 #29	ENSGT00940000158915 #30	ENSGT00940000159465 #31	ENSGT00940000155107.a.a.a #32	ENSGT00990000203803 #34	ENSGT00940000156762 #35	ENSGT00940000157291 #36	ENSGT00390000015364.b #37	ENSGT00390000016054.b.i
Characiphysae	ANCESTRAL SPECIES		ENSGT00940000157218.A	ENSGT01030000234623.a.a.b.a	ENSGT00990000203824	ENSGT01030000234597.b.a.b.c.b	ENSGT00940000161438	ENSGT00940000157151.c	ENSGT00940000178073	ENSGT00410000025596.a.b.a	ENSGT00940000164800	ENSGT00940000164873	ENSGT00390000002144	ENSGT00910000144179.b.b.o.a	ENSGT00530000063624.C.b	ENSGT00940000157999	ENSGT00940000159398 #21	ENSGT00950000182941.a.a.b.e.a.b #22	ENSGT00950000183163.a.a.ab #23	ENSGT00940000160627 #24	ENSGT00940000154096.b.b.b.b.b #25	ENSGT00950000182986.b #26	ENSGT00390000004808.e #27	ENSGT01030000235168	ENSGT00390000001737 #29	ENSGT00940000158915 #30	ENSGT00940000159465 #31	ENSGT00940000155107.a.a.a #32	ENSGT00990000203803 #34	ENSGT00940000156762 #35	ENSGT00940000157291 #36	ENSGT00390000015364.b #37	ENSGT00390000016054.b.i
Characiphysae_b	ANCESTRAL SPECIES	2	ENSGT00940000157218.A	ENSGT01030000234623.a.a.b.a	ENSGT00990000203824	ENSGT01030000234597.b.a.b.c.b	ENSGT00940000161438	ENSGT00940000157151.c	ENSGT00940000178073	ENSGT00410000025596.a.b.a	ENSGT00940000164800	ENSGT00940000164873	ENSGT00390000002144	ENSGT00910000144179.b.b.o.a	ENSGT00530000063624.C.b	ENSGT00940000157999	ENSGT00940000159398 #21	ENSGT00950000182941.a.a.b.e.a.b #22	ENSGT00950000183163.a.a.ab #23	ENSGT00940000160627 #24	ENSGT00940000154096.b.b.b.b.b #25	ENSGT00950000182986.b #26	ENSGT00390000004808.e #27	ENSGT01030000235168	ENSGT00390000001737 #29	ENSGT00940000158915 #30	ENSGT00940000159465 #31	ENSGT00940000155107.a.a.a #32	ENSGT00990000203803 #34	ENSGT00940000156762 #35	ENSGT00940000157291 #36	ENSGT00390000015364.b #37	ENSGT00390000016054.b.i
Characoidei	ANCESTRAL SPECIES	7							ENSGT00940000178073	ENSGT00410000025596.a.b.a	ENSGT00940000164800	ENSGT00940000164873	ENSGT00390000002144	ENSGT00910000144179.b.b.o.a	ENSGT00530000063624.C.b	ENSGT00940000157999	ENSGT00940000159398 #21	ENSGT00950000182941.a.a.b.e.a.b #22	ENSGT00950000183163.a.a.ab #23	ENSGT00940000160627 #24	ENSGT00940000154096.b.b.b.b.b #25	ENSGT00950000182986.b #26	ENSGT00390000004808.e #27	ENSGT01030000235168	ENSGT00390000001737 #29	ENSGT00940000158915 #30	ENSGT00940000159465 #31	ENSGT00940000155107.a.a.a #32	ENSGT00990000203803 #34	ENSGT00940000156762 #35	ENSGT00940000157291 #36	ENSGT00390000015364.b #37	ENSGT00390000016054.b.i
Red-bellied piranha	MODERN SPECIES	138										rab42b (ENSPNAG00000014821)	taf12 (ENSPNAG00000003268)	ctps1b (ENSPNAG00000014866)	cited4b (ENSPNAG00000003315)	SCMH1 (ENSPNAG00000014937)	MAP3K6 (ENSPNAG00000004700) #21	map7d1a (ENSPNAG00000003361) #22	THRAP3 (ENSPNAG00000015136) #23	sh3d21 (ENSPNAG00000015238) #24	eva1ba (ENSPNAG00000015261) #25	STK40 (ENSPNAG00000015317) #26	OSCP1 (ENSPNAG00000015372) #27	ENSPNAG00000015385	mrps15 (ENSPNAG00000015400) #29	csf3r (ENSPNAG00000015415) #30	GRIK3 (ENSPNAG00000003389) #31	ZC3H12A (ENSPNAG00000015494) #32	ENSPNAG00000015519 #34	INPP5B (ENSPNAG00000015577) #35	mtf1 (ENSPNAG00000015605) #36	yrdc (ENSPNAG00000015625) #37	MANEAL (ENSPNAG00000015638)
Mexicana tetra	MODERN SPECIES	1	prpf31 (ENSAMXG00000012329)	ENSAMXG00000012311	leng1 (ENSAMXG00000012294)	RSPO2 (ENSAMXG00000037389)	eif3ea (ENSAMXG00000040417)	emc2 (ENSAMXG00000039406)	ENSAMXG00000040414	ENSAMXG00000032787	ENSAMXG00000001945	rab42b (ENSAMXG00000038342)	taf12 (ENSAMXG00000042121)	ctps1b (ENSAMXG00000001913)	ENSAMXG00000034018	scmh1 (ENSAMXG00000036301)	MAP3K6 (ENSAMXG00000001890) #21	map7d1a (ENSAMXG00000001876) #22	THRAP3 (ENSAMXG00000001863) #23	sh3d21 (ENSAMXG00000001850) #24	eva1ba (ENSAMXG00000041799) #25	STK40 (ENSAMXG00000029312) #26	OSCP1 (ENSAMXG00000042434) #27	ENSAMXG00000001798	mrps15 (ENSAMXG00000001781) #29	csf3r (ENSAMXG00000001766) #30	GRIK3 (ENSAMXG00000001749) #31	ENSAMXG00000031100	ENSAMXG00000042004	ZC3H12A (ENSAMXG00000001736) #32	ENSAMXG00000034489 #34	ENSAMXG00000037974	INPP5B (ENSAMXG00000001691) #35
Electric eel	MODERN SPECIES	52	HIVEP3 (ENSEEEG00000006754)	SERINC2 (ENSEEEG00000006747)	ENSEEEG00000006746	ENSEEEG00000006744	paqr7b (ENSEEEG00000006743)	ptprub (ENSEEEG00000006734)	ENSEEEG00000006731	rab42b (ENSEEEG00000006729)	taf12 (ENSEEEG00000006728)	ctps1b (ENSEEEG00000006717)	cited4b (ENSEEEG00000006711)	ENSEEEG00000006710	ENSEEEG00000006709	scmh1 (ENSEEEG00000006708)	MAP3K6 (ENSEEEG00000006701) #21	map7d1a (ENSEEEG00000006695) #22	ENSEEEG00000006694 #23	sh3d21 (ENSEEEG00000006689) #24	eva1ba (ENSEEEG00000006686) #25	nsun5 (ENSEEEG00000006685)	ripk4 (ENSEEEG00000006681)	zgc:110006 (ENSEEEG00000006680)	SUPT20H (ENSEEEG00000006261)	exosc8 (ENSEEEG00000006234)	alg5 (ENSEEEG00000006226)	ENSEEEG00000006222	rfxap (ENSEEEG00000006221)	SERTM1 (ENSEEEG00000006219)	ccna1 (ENSEEEG00000006207)	sparta (ENSEEEG00000006205)	ENSEEEG00000006204
Channel catfish	MODERN SPECIES		cyp4t8 (ENSIPUG00000014649)	Ppp1r8 (ENSIPUG00000014723)	themis2 (ENSIPUG00000014758)	Rpa2 (ENSIPUG00000014790)	smpdl3b (ENSIPUG00000014863)	mecr (ENSIPUG00000014921)	LIN28A (ENSIPUG00000014952)	ENSIPUG00000014960	MANEAL (ENSIPUG00000014973)	yrdc (ENSIPUG00000014985) #37	Mtf1 (ENSIPUG00000015020) #36	inpp5b (ENSIPUG00000015075) #35	ENSIPUG00000015128 #34	Zc3h12a (ENSIPUG00000015158) #32	GRIK3 (ENSIPUG00000015183) #31	map7d1 (ENSIPUG00000015269) #22	THRAP3 (ENSIPUG00000015339) #23	Cd2ap (ENSIPUG00000015399) #24	Eva1b (ENSIPUG00000015458) #25	stk40 (ENSIPUG00000015473) #26	Oscp1 (ENSIPUG00000015510) #27	pl8l1 (ENSIPUG00000015558)	mrps15 (ENSIPUG00000015599) #29	csf3r (ENSIPUG00000015617) #30	ENSIPUG00000015639 #21	SCMH1 (ENSIPUG00000015680)	CITED3 (ENSIPUG00000015725)	ctps1b (ENSIPUG00000015748)	taf12 (ENSIPUG00000015799)	RAB39B (ENSIPUG00000015874)	ENSIPUG00000015908
Cyprinoidei	ANCESTRAL SPECIES	60	ENSGT00940000157218.A	ENSGT01030000234623.a.a.b.a	ENSGT00990000203824	ENSGT01030000234597.b.a.b.c.a	ENSGT01030000234597.b.a.b.c.b	ENSGT00940000161438	ENSGT00940000157151.c	ENSGT00940000164800	ENSGT00940000164873.f	ENSGT00940000164873.e	ENSGT00390000002144	ENSGT00910000144179.b.b.o.a	ENSGT00530000063624.C.b	ENSGT00940000157999	ENSGT00940000159398 #21	ENSGT00950000182941.a.a.b.e.a.b #22	ENSGT00950000183163.a.a.ab #23	ENSGT00940000160627 #24	ENSGT00940000154096.b.b.b.b.b #25	ENSGT00950000182986.b #26	ENSGT00390000004808.e #27	ENSGT01030000235168	ENSGT00390000001737 #29	ENSGT00390000018500.b.b.a	ENSGT00940000155892	ENSGT00940000155619.j.a	ENSGT01030000235403	ENSGT01030000235163	ENSGT00390000016225	ENSGT00940000153801.b	ENSGT00950000183108.b.a.b
Cyprininae	DUPLICATION
Cyprininae	ANCESTRAL SPECIES	28	ENSGT00940000157218.A.b	ENSGT01030000234623.a.a.b.a.e	ENSGT00990000203824.b	ENSGT01030000234597.b.a.b.c.b	ENSGT00940000161438.c	ENSGT00940000157151.c.b	ENSGT00940000164800.c	ENSGT00940000164873.f	ENSGT00390000002144.gb	ENSGT00940000164873.e.a	ENSGT00390000002144.fb.a	ENSGT00910000144179.b.b.o.a.d	ENSGT00530000063624.C.b.h	ENSGT00940000157999.z	ENSGT00940000159398.e #21	ENSGT00950000182941.a.a.b.e.a.b.a #22	ENSGT00950000183163.a.a.ab.b #23	ENSGT00940000160627.i #24	ENSGT00940000154096.b.b.b.b.b.d #25	ENSGT00950000182986.b.a #26	ENSGT00390000004808.e.d #27	ENSGT01030000235168.a	ENSGT00390000001737.r #29	ENSGT00390000018500.b.b.a.b	ENSGT00940000155892.f	ENSGT00940000155619.j.a.c	ENSGT00390000016225.l	ENSGT00940000153801.b.l	ENSGT00950000183108.b.a.b.d	ENSGT00950000182991.A.a.c.a.b.f	ENSGT00390000014242.l.a
Goldfish	MODERN SPECIES	7	akirin1 (ENSCARG00000012946) #9	rhbdl2 (ENSCARG00000012940) #10	GJA9 (ENSCARG00000012937) #11	rragca (ENSCARG00000012929) #13	pou3f1 (ENSCARG00000012924) #14	utp11 (ENSCARG00000012919) #15	FHL3 (ENSCARG00000012912) #16	ptprub (ENSCARG00000009039)	ENSCARG00000008863	rab42b (ENSCARG00000008855)	taf12 (ENSCARG00000008850)	ctps1b (ENSCARG00000008731)	cited4b (ENSCARG00000008702)	SCMH1 (ENSCARG00000008621)	ENSCARG00000007670 #21	map7d1a (ENSCARG00000007511) #22	THRAP3 (ENSCARG00000007470) #23	sh3d21 (ENSCARG00000007452) #24	eva1ba (ENSCARG00000007440) #25	STK40 (ENSCARG00000007427) #26	OSCP1 (ENSCARG00000007397) #27	ENSCARG00000007365	mrps15 (ENSCARG00000007353) #29	sh3bp5b (ENSCARG00000007340)	capn7 (ENSCARG00000007054)	ENSCARG00000006998	PIK3R4 (ENSCARG00000006883)	decr1 (ENSCARG00000006829)	CALB1 (ENSCARG00000006811)	pnp4b (ENSCARG00000006776)	TDP2 (ENSCARG00000006763)
Cyprininae_a	ANCESTRAL SPECIES	7	ENSGT00940000157218.A.b	ENSGT01030000234623.a.a.b.a.e	ENSGT00990000203824.b	ENSGT01030000234597.b.a.b.c.b	ENSGT00940000161438.c	ENSGT00940000157151.c.b	ENSGT00940000164800.c	ENSGT00940000164873.f	ENSGT00390000002144.gb	ENSGT00940000164873.e.a	ENSGT00390000002144.fb.a	ENSGT00910000144179.b.b.o.a.d	ENSGT00530000063624.C.b.h	ENSGT00940000157999.z	ENSGT00940000159398.e #21	ENSGT00950000182941.a.a.b.e.a.b.a #22	ENSGT00950000183163.a.a.ab.b #23	ENSGT00940000160627.i #24	ENSGT00940000154096.b.b.b.b.b.d #25	ENSGT00950000182986.b.a #26	ENSGT00390000004808.e.d #27	ENSGT01030000235168.a	ENSGT00390000001737.r #29	ENSGT00390000018500.b.b.a.b	ENSGT00940000155892.f	ENSGT00940000155619.j.a.c	ENSGT00390000016225.l	ENSGT00940000153801.b.l	ENSGT00950000183108.b.a.b.d	ENSGT00950000182991.A.a.c.a.b.f	ENSGT00390000014242.l.a
Common carp reference	MODERN SPECIES	47	ENSCCRG00000012340	ENSCCRG00000061507	ENSCCRG00000046953	ENSCCRG00000076374	ENSCCRG00000057025	paqr7b (ENSCCRG00000081087)	ptprub (ENSCCRG00000031387)	ENSCCRG00000002646	si:dkey-34d22.2 (ENSCCRG00000046399)	taf12 (ENSCCRG00000058395)	rab42b (ENSCCRG00000073740)	ctps1b (ENSCCRG00000006972)	cited4b (ENSCCRG00000065553)	ENSCCRG00000006980	ENSCCRG00000006540 #21	map7d1a (ENSCCRG00000065527) #22	THRAP3 (ENSCCRG00000051496) #23	sh3d21 (ENSCCRG00000051498) #24	eva1ba (ENSCCRG00000065911) #25	STK40 (ENSCCRG00000015578) #26	OSCP1 (ENSCCRG00000073652) #27	mrps15 (ENSCCRG00000006421) #29	sh3bp5b (ENSCCRG00000006451)	capn7 (ENSCCRG00000005977)	ENSCCRG00000007312	ENSCCRG00000003522	decr1 (ENSCCRG00000078230)	ENSCCRG00000003497	pnp4b (ENSCCRG00000081736)	ENSCCRG00000033400	ENSCCRG00000002659
Golden-line barbel	MODERN SPECIES	103							paqr7b (ENSSGRG00000018604)	ptprub (ENSSGRG00000014465)	ENSSGRG00000014379	rab42b (ENSSGRG00000014377)	taf12 (ENSSGRG00000014368)	ctps1b (ENSSGRG00000013262)	cited4b (ENSSGRG00000013241)	SCMH1 (ENSSGRG00000013239)	MAP3K6 (ENSSGRG00000013042) #21	map7d1a (ENSSGRG00000013019) #22	THRAP3 (ENSSGRG00000013014) #23	ENSSGRG00000013011	sh3d21 (ENSSGRG00000013008) #24	eva1ba (ENSSGRG00000013005) #25	STK40 (ENSSGRG00000012994) #26	OSCP1 (ENSSGRG00000012853) #27	ENSSGRG00000012851	mrps15 (ENSSGRG00000012849) #29	sh3bp5b (ENSSGRG00000012848)	capn7 (ENSSGRG00000012741)	ENSSGRG00000012740	ENSSGRG00000012737	PIK3R4 (ENSSGRG00000011694)	decr1 (ENSSGRG00000011623)	ENSSGRG00000011622
Cyprininae	ANCESTRAL SPECIES	99	ENSGT00940000157582.g.b	ENSGT00950000183053.A.a.b.c	ENSGT00940000157218.A.a	ENSGT01030000234623.a.a.b.a.f	ENSGT00990000203824.a	ENSGT01030000234597.b.a.b.c.a	ENSGT00940000161438.d	ENSGT00940000157151.c.a	ENSGT00940000164800.d	ENSGT00940000164873.e.b	ENSGT00390000002144.fb.b	ENSGT00910000144179.b.b.o.a.c	ENSGT00530000063624.C.b.g	ENSGT00940000157999.`b	ENSGT00940000159398.f #21	ENSGT00950000182941.a.a.b.e.a.b.b #22	ENSGT00950000183163.a.a.ab.a #23	ENSGT00940000160627.j #24	ENSGT00940000154096.b.b.b.b.b.c #25	ENSGT00950000182986.b.b #26	ENSGT00390000004808.e.c #27	ENSGT01030000235168.b	ENSGT00390000001737.q #29	ENSGT00390000018500.b.b.a.a	ENSGT00940000155892.e	ENSGT00940000155619.j.a.d	ENSGT01030000235403	ENSGT01030000235163	ENSGT00390000016225.k	ENSGT00940000153801.b.k.b	ENSGT00940000158130.i.b
Goldfish	MODERN SPECIES	35	trmt11 (ENSCARG00000054211)	ENSCARG00000054317	hint3 (ENSCARG00000054332)	rbms3 (ENSCARG00000054410)	TGFBR2 (ENSCARG00000055298)	ENSCARG00000055375	ENSCARG00000055400	ENSCARG00000055444	rab42b (ENSCARG00000055462)	taf12 (ENSCARG00000055487)	ctps1b (ENSCARG00000055537)	ENSCARG00000055671	cited4b (ENSCARG00000049988)	SCMH1 (ENSCARG00000050008)	MAP3K6 (ENSCARG00000050052) #21	map7d1a (ENSCARG00000050150) #22	ENSCARG00000050384	THRAP3 (ENSCARG00000050399) #23	sh3d21 (ENSCARG00000050454) #24	eva1ba (ENSCARG00000050535) #25	STK40 (ENSCARG00000050551) #26	OSCP1 (ENSCARG00000050573) #27	mrps15 (ENSCARG00000050614) #29	sh3bp5b (ENSCARG00000050652)	capn7 (ENSCARG00000050670)	ENSCARG00000050729	dpy19l1l (ENSCARG00000050759)	SLC4A7 (ENSCARG00000051769)	ANKRD34A (ENSCARG00000054557)	txnipb (ENSCARG00000054570)	ENSCARG00000054580
Cyprininae_a	ANCESTRAL SPECIES	192								ENSGT00940000157151.c.a	ENSGT00940000164800.d	ENSGT00940000164873.e.b	ENSGT00390000002144.fb.b	ENSGT00910000144179.b.b.o.a.c	ENSGT00530000063624.C.b.g	ENSGT00940000157999.`b	ENSGT00940000159398.f #21	ENSGT00950000182941.a.a.b.e.a.b.b #22	ENSGT00950000183163.a.a.ab.a #23	ENSGT00940000160627.j #24	ENSGT00940000154096.b.b.b.b.b.c #25	ENSGT00950000182986.b.b #26	ENSGT00390000004808.e.c #27	ENSGT01030000235168.b	ENSGT00390000001737.q #29	ENSGT00390000018500.b.b.a.a	ENSGT00940000155892.e	ENSGT00940000155619.j.a.d	ENSGT01030000235403	ENSGT01030000235163	ENSGT00390000016225.k	ENSGT00940000153801.b.k.a	ENSGT00950000183108.b.a.b.c
Common carp reference	MODERN SPECIES	2	phactr4b (ENSCCRG00000012094)	ENSCCRG00000005202	ENSCCRG00000012346	ENSCCRG00000012366	ENSCCRG00000065016	stmn1b (ENSCCRG00000010471)	paqr7b (ENSCCRG00000067636)	ptprub (ENSCCRG00000011143)	ENSCCRG00000031270	rab42b (ENSCCRG00000006957)	ctps1b (ENSCCRG00000053678)	ENSCCRG00000054658	cited4b (ENSCCRG00000077681)	ENSCCRG00000080902	ENSCCRG00000007359 #21	map7d1a (ENSCCRG00000006475) #22	THRAP3 (ENSCCRG00000008262) #23	sh3d21 (ENSCCRG00000008250) #24	eva1ba (ENSCCRG00000080956) #25	STK40 (ENSCCRG00000053931) #26	OSCP1 (ENSCCRG00000015603) #27	mrps15 (ENSCCRG00000015732) #29	sh3bp5b (ENSCCRG00000015738)	capn7 (ENSCCRG00000015763)	ENSCCRG00000002746	ENSCCRG00000037667	decr1 (ENSCCRG00000057184)	ENSCCRG00000037627	pnp4b (ENSCCRG00000055203)	ENSCCRG00000002479	ENSCCRG00000053628
Golden-line barbel	MODERN SPECIES	554														SCMH1 (ENSSGRG00000033634)	MAP3K6 (ENSSGRG00000033642) #21	map7d1a (ENSSGRG00000034182) #22	THRAP3 (ENSSGRG00000034193) #23	sh3d21 (ENSSGRG00000034198) #24	eva1ba (ENSSGRG00000034201) #25	STK40 (ENSSGRG00000034202) #26	OSCP1 (ENSSGRG00000034217) #27	OSCP1 (ENSSGRG00000034218) #27	ENSSGRG00000034219	mrps15 (ENSSGRG00000034224) #29	sh3bp5b (ENSSGRG00000034229)	capn7 (ENSSGRG00000034342)	ENSSGRG00000034891	ENSSGRG00000034893	ENSSGRG00000034894	PIK3R4 (ENSSGRG00000034920)	decr1 (ENSSGRG00000036119)
Zebrafish	MODERN SPECIES	7	SERINC2 (ENSDARG00000053425)	ENSDARG00000095152	paqr7b (ENSDARG00000034907)	stmn1b (ENSDARG00000033655)	ptprub (ENSDARG00000101081)	ENSDARG00000103181	si:dkey-34d22.2 (ENSDARG00000100379)	ENSDARG00000101352	ENSDARG00000104865	rab42b (ENSDARG00000101170)	taf12 (ENSDARG00000104030)	ctps1b (ENSDARG00000098386)	cited4b (ENSDARG00000101009)	scmh1 (ENSDARG00000104311)	ENSDARG00000104760 #21	map7d1a (ENSDARG00000098802) #22	THRAP3 (ENSDARG00000101989) #23	sh3d21 (ENSDARG00000099448) #24	eva1ba (ENSDARG00000102701) #25	STK40 (ENSDARG00000098135) #26	OSCP1 (ENSDARG00000101888) #27	mrps15 (ENSDARG00000109289) #29	ENSDARG00000114387	sh3bp5b (ENSDARG00000103978)	capn7 (ENSDARG00000102987)	ENSDARG00000079752	PIK3R4 (ENSDARG00000060469)	decr1 (ENSDARG00000003869)	CALB1 (ENSDARG00000031598)	ENSDARG00000103001	pnp4b (ENSDARG00000029230)
Clupeiformes	ANCESTRAL SPECIES		ENSGT00530000063881.a.b #7	ENSGT01060000248564.a.b #8	ENSGT00940000158787 #9	ENSGT00940000159442 #10	ENSGT01090000260070.C.a #11	ENSGT00950000183031.A.a.a #13	ENSGT00940000165372 #14	ENSGT00390000005813 #15	ENSGT00950000183028.a.b.a #16	ENSGT00390000015257.c	ENSGT00390000003012 #19	ENSGT00810000125524 #18	ENSGT00940000158871 #17	ENSGT00940000156553 #20	ENSGT00940000159398 #21	ENSGT00950000182941.a.a.b.e.a.b #22	ENSGT00950000183163.a.a.ab #23	ENSGT00940000160627 #24	ENSGT00940000154096.b.b.b.b.b #25	ENSGT00950000182986.b #26	ENSGT00390000004808.e #27	ENSGT00390000001737 #29	ENSGT00940000158915 #30	ENSGT00940000159465 #31	ENSGT00940000155107.a.a.a #32	ENSGT00990000203803 #34	ENSGT00940000156762 #35	ENSGT00940000157291 #36	ENSGT00390000015364.b #37	ENSGT00390000016054.b.i	ENSGT00940000153295.a.a
Denticle herring	MODERN SPECIES	15	ENSDCDG00000014733	cyb5r4 (ENSDCDG00000014749)	sim1a (ENSDCDG00000014778)	ASCC3 (ENSDCDG00000014836)	GRIK2 (ENSDCDG00000014913)	ENSDCDG00000016058	ENSDCDG00000016059	HACE1 (ENSDCDG00000016081)	LIN28B (ENSDCDG00000016121)	bves (ENSDCDG00000016159)	popdc3 (ENSDCDG00000016167)	ENSDCDG00000016171	ENSDCDG00000016180	SNIP1 (ENSDCDG00000016195) #20	MAP3K6 (ENSDCDG00000016278) #21	map7d1a (ENSDCDG00000016562) #22	THRAP3 (ENSDCDG00000016601) #23	sh3d21 (ENSDCDG00000016619) #24	eva1ba (ENSDCDG00000016622) #25	STK40 (ENSDCDG00000016626) #26	OSCP1 (ENSDCDG00000016632) #27	mrps15 (ENSDCDG00000016644) #29	csf3r (ENSDCDG00000016649) #30	ENSDCDG00000016659	GRIK3 (ENSDCDG00000016667) #31	ZC3H12A (ENSDCDG00000016680) #32	ENSDCDG00000016681 #34	INPP5B (ENSDCDG00000016709) #35	mtf1 (ENSDCDG00000017280) #36	yrdc (ENSDCDG00000017420) #37	MANEAL (ENSDCDG00000017425)
Atlantic herring	MODERN SPECIES	2	cnr2 (ENSCHAG00000016500) #8	akirin1 (ENSCHAG00000016529) #9	rhbdl2 (ENSCHAG00000016567) #10	pou3f1 (ENSCHAG00000016607) #14	utp11 (ENSCHAG00000016611) #15	FHL3 (ENSCHAG00000016623) #16	MEAF6 (ENSCHAG00000016643)	ENSCHAG00000016660	dnali1 (ENSCHAG00000016663) #19	gnl2 (ENSCHAG00000016691) #18	ENSCHAG00000016810	ENSCHAG00000016824	rspo1 (ENSCHAG00000016833) #17	snip1 (ENSCHAG00000016834)	MAP3K6 (ENSCHAG00000016845) #21	map7d1a (ENSCHAG00000017603) #22	THRAP3 (ENSCHAG00000017660) #23	sh3d21 (ENSCHAG00000017676) #24	eva1ba (ENSCHAG00000017699) #25	STK40 (ENSCHAG00000017718) #26	OSCP1 (ENSCHAG00000017793) #27	mrps15 (ENSCHAG00000017903) #29	ENSCHAG00000017916	ENSCHAG00000017931	csf3r (ENSCHAG00000017945) #30	GRIK3 (ENSCHAG00000018120) #31	ZC3H12A (ENSCHAG00000020414) #32	ENSCHAG00000000349 #34	INPP5B (ENSCHAG00000001030) #35	mtf1 (ENSCHAG00000002640) #36	yrdc (ENSCHAG00000002890) #37
Clupeocephala	DUPLICATION
Clupeocephala	ANCESTRAL SPECIES																	ENSGT00950000182941.a.a.b.e.a.a.a ##22
Otomorpha	ANCESTRAL SPECIES																	ENSGT00950000182941.a.a.b.e.a.a.a ##22
Otophysi	DUPLICATION
Otophysi	ANCESTRAL SPECIES																	ENSGT00950000182941.a.a.b.e.a.a.a.a ##22
Cyprinoidei	ANCESTRAL SPECIES																	ENSGT00950000182941.a.a.b.e.a.a.a.a ##22
Zebrafish	DUPLICATION
Zebrafish	MODERN SPECIES	10	ENSDARG00000103106	TRAPPC9 (ENSDARG00000099118)	rragcb (ENSDARG00000099049) #13	fhl3b (ENSDARG00000104315) ##16	ENSDARG00000100909	ENSDARG00000105241	btr25 (ENSDARG00000102018)	ENSDARG00000102143	ENSDARG00000099509	meaf6 (ENSDARG00000101216)	stpg1 (ENSDARG00000103765)	ENSDARG00000113654	map7d1b (ENSDARG00000104701) ##22	ENSDARG00000101490 ##22	ENSDARG00000103395 ##22	ENSDARG00000102533 ##22	ENSDARG00000089402 ##22	thrap3b (ENSDARG00000098228) ##23	eva1bb (ENSDARG00000100698) ##25	LSM10 (ENSDARG00000101222)	oscp1a (ENSDARG00000104403) ##27	zc3h12ab (ENSDARG00000101034) ##32	ENSDARG00000100046	ENSDARG00000105283	ENSDARG00000102913	ENSDARG00000102992	ENSDARG00000100450	btr18 (ENSDARG00000103618)	ENSDARG00000100539	ENSDARG00000112881	smim13 (ENSDARG00000089204)
Zebrafish	MODERN SPECIES	10	TRAPPC9 (ENSDARG00000099118)	rragcb (ENSDARG00000099049) #13	fhl3b (ENSDARG00000104315) ##16	ENSDARG00000100909	ENSDARG00000105241	btr25 (ENSDARG00000102018)	ENSDARG00000102143	ENSDARG00000099509	meaf6 (ENSDARG00000101216)	stpg1 (ENSDARG00000103765)	ENSDARG00000113654	map7d1b (ENSDARG00000104701) ##22	ENSDARG00000101490 ##22	ENSDARG00000103395 ##22	ENSDARG00000102533 ##22	ENSDARG00000089402 ##22	thrap3b (ENSDARG00000098228) ##23	eva1bb (ENSDARG00000100698) ##25	LSM10 (ENSDARG00000101222)	oscp1a (ENSDARG00000104403) ##27	zc3h12ab (ENSDARG00000101034) ##32	ENSDARG00000100046	ENSDARG00000105283	ENSDARG00000102913	ENSDARG00000102992	ENSDARG00000100450	btr18 (ENSDARG00000103618)	ENSDARG00000100539	ENSDARG00000112881	smim13 (ENSDARG00000089204)	nedd9 (ENSDARG00000089878)
Characiphysae	ANCESTRAL SPECIES																	ENSGT00950000182941.a.a.b.e.a.a.a.a ##22
Characiphysae_b	ANCESTRAL SPECIES																	ENSGT00950000182941.a.a.b.e.a.a.a.a ##22
Characoidei	ANCESTRAL SPECIES																	ENSGT00950000182941.a.a.b.e.a.a.a.a ##22
Mexicana tetra	MODERN SPECIES	6	ddx19a (ENSAMXG00000015325)	ENSAMXG00000034791	VWA5B1 (ENSAMXG00000032840)	CAMK2N1 (ENSAMXG00000032815)	mul1b (ENSAMXG00000036074)	fam43b (ENSAMXG00000024828)	ENSAMXG00000008981	ENSAMXG00000042708	cdaa (ENSAMXG00000034539)	pink1 (ENSAMXG00000038123)	agmat (ENSAMXG00000030343)	DNAJC16 (ENSAMXG00000018083)	iyd (ENSAMXG00000030031)	selenoi (ENSAMXG00000042381)	ppp1r14c (ENSAMXG00000037953)	ENSAMXG00000041374 ##22	ENSAMXG00000025984	ENSAMXG00000038595	cyp17a2 (ENSAMXG00000043927)	egr4 (ENSAMXG00000030340)	ENSAMXG00000034155	DCLK2 (ENSAMXG00000040052)	ENSAMXG00000036777	FHIP1A (ENSAMXG00000004939)	ENSAMXG00000004935	ENSAMXG00000043047	cptp (ENSAMXG00000004933)	ints11 (ENSAMXG00000038758)	ENSAMXG00000041584	ACAP3 (ENSAMXG00000004927)	ube2j2 (ENSAMXG00000004921)
Otophysi	ANCESTRAL SPECIES																	ENSGT00950000182941.a.a.b.e.a.a.a.b ##22
Cyprinoidei	ANCESTRAL SPECIES																	ENSGT00950000182941.a.a.b.e.a.a.a.b ##22
Zebrafish	DUPLICATION
Zebrafish	MODERN SPECIES	10	kcnk9 (ENSDARG00000104563)	ENSDARG00000103106	TRAPPC9 (ENSDARG00000099118)	rragcb (ENSDARG00000099049) #13	fhl3b (ENSDARG00000104315) ##16	ENSDARG00000100909	ENSDARG00000105241	btr25 (ENSDARG00000102018)	ENSDARG00000102143	ENSDARG00000099509	meaf6 (ENSDARG00000101216)	stpg1 (ENSDARG00000103765)	ENSDARG00000113654	map7d1b (ENSDARG00000104701) ##22	ENSDARG00000101490 ##22	ENSDARG00000103395 ##22	ENSDARG00000102533 ##22	ENSDARG00000089402 ##22	thrap3b (ENSDARG00000098228) ##23	eva1bb (ENSDARG00000100698) ##25	LSM10 (ENSDARG00000101222)	oscp1a (ENSDARG00000104403) ##27	zc3h12ab (ENSDARG00000101034) ##32	ENSDARG00000100046	ENSDARG00000105283	ENSDARG00000102913	ENSDARG00000102992	ENSDARG00000100450	btr18 (ENSDARG00000103618)	ENSDARG00000100539	ENSDARG00000112881
Zebrafish	MODERN SPECIES	10	ENSDARG00000079654	kcnk9 (ENSDARG00000104563)	ENSDARG00000103106	TRAPPC9 (ENSDARG00000099118)	rragcb (ENSDARG00000099049) #13	fhl3b (ENSDARG00000104315) ##16	ENSDARG00000100909	ENSDARG00000105241	btr25 (ENSDARG00000102018)	ENSDARG00000102143	ENSDARG00000099509	meaf6 (ENSDARG00000101216)	stpg1 (ENSDARG00000103765)	ENSDARG00000113654	map7d1b (ENSDARG00000104701) ##22	ENSDARG00000101490 ##22	ENSDARG00000103395 ##22	ENSDARG00000102533 ##22	ENSDARG00000089402 ##22	thrap3b (ENSDARG00000098228) ##23	eva1bb (ENSDARG00000100698) ##25	LSM10 (ENSDARG00000101222)	oscp1a (ENSDARG00000104403) ##27	zc3h12ab (ENSDARG00000101034) ##32	ENSDARG00000100046	ENSDARG00000105283	ENSDARG00000102913	ENSDARG00000102992	ENSDARG00000100450	btr18 (ENSDARG00000103618)	ENSDARG00000100539
Euteleosteomorpha	ANCESTRAL SPECIES																	ENSGT00950000182941.a.a.b.e.a.a.a ##22
Acanthomorphata	ANCESTRAL SPECIES																	ENSGT00950000182941.a.a.b.e.a.a.a ##22
Cod	MODERN SPECIES	18	ENSGMOG00000025618	ENSGMOG00000027948	gja10a (ENSGMOG00000002098) ##11	ENSGMOG00000029715	ENSGMOG00000030418	ENSGMOG00000036440	ENSGMOG00000001776	ENSGMOG00000031697	ENSGMOG00000029140	ENSGMOG00000028769	ENSGMOG00000030873	ENSGMOG00000019348	ENSGMOG00000027382	ENSGMOG00000029480	ENSGMOG00000019382	ENSGMOG00000029632 ##22	ENSGMOG00000033270	ahi1 (ENSGMOG00000019402)	slc18b1 (ENSGMOG00000028735)	slc18b1 (ENSGMOG00000030233)	slc18b1 (ENSGMOG00000019410)	ENSGMOG00000019415	ENSGMOG00000023735	ENSGMOG00000019433	rmnd1 (ENSGMOG00000019502)	ENSGMOG00000033787	stx11a (ENSGMOG00000034568)	fbxo30a (ENSGMOG00000025323)	ENSGMOG00000026983	ENSGMOG00000016082	ENSGMOG00000034655
Clupeocephala	ANCESTRAL SPECIES																	ENSGT00950000182941.a.a.b.e.a.a.b ##22
Euteleosteomorpha	ANCESTRAL SPECIES																	ENSGT00950000182941.a.a.b.e.a.a.b ##22
Acanthomorphata	ANCESTRAL SPECIES																	ENSGT00950000182941.a.a.b.e.a.a.b ##22
Cod	MODERN SPECIES	19	ENSGMOG00000025532	ENSGMOG00000022940	ENSGMOG00000033659	ENSGMOG00000029166	ENSGMOG00000028407	etfb (ENSGMOG00000009792)	ENSGMOG00000023830	ENSGMOG00000031015	iglon5 (ENSGMOG00000030867)	ENSGMOG00000024736	ENSGMOG00000023507	ENSGMOG00000019418	ago1 (ENSGMOG00000019413)	dhdds (ENSGMOG00000001113)	ENSGMOG00000025369	MAP7D1 (ENSGMOG00000024856) ##22	ENSGMOG00000035895 #23	ENSGMOG00000006557 #24	eva1ba (ENSGMOG00000033967) #25	hint3 (ENSGMOG00000006588)	ENSGMOG00000034923	trmt11 (ENSGMOG00000006618)	RNF146 (ENSGMOG00000035264)	tent5ba (ENSGMOG00000019728)	zdhhc18a (ENSGMOG00000001179)	pigv (ENSGMOG00000001161)	ARID1A (ENSGMOG00000001024)	gpn2 (ENSGMOG00000001010)	GPATCH3 (ENSGMOG00000000991)	nr0b2a (ENSGMOG00000000984)	ENSGMOG00000024982
Osteoglossiformes	ANCESTRAL SPECIES	101	ENSGT00940000158787 #9	ENSGT00940000159442 #10	ENSGT01030000235133	ENSGT01090000260070.C.a #11	ENSGT00390000017974.nb #12	ENSGT00950000183031.A.a.a #13	ENSGT00940000165372 #14	ENSGT00390000005813 #15	ENSGT00950000183028.a.b.a #16	ENSGT00390000015257	ENSGT00940000158871 #17	ENSGT00810000125524 #18	ENSGT00390000003012 #19	ENSGT00940000156553 #20	ENSGT00940000159398 #21	ENSGT00950000182941.a.a.b.e.a #22	ENSGT00950000183163.a.a.ab #23	ENSGT00940000160627 #24	ENSGT00940000154096.b.b.b.b.b #25	ENSGT00950000182986.b #26	ENSGT00390000004808.e #27	ENSGT01030000235168	ENSGT00390000001737 #29	ENSGT00940000158915 #30	ENSGT00940000159465 #31	ENSGT00940000155107.a.a #32	ENSGT00530000063402.a	ENSGT00940000156762 #35	ENSGT00940000157291 #36	ENSGT00390000015364.b #37	ENSGT00390000016054.b
P. kingsleyae	MODERN SPECIES	185										meaf6 (ENSPKIG00000005531)	rspo1 (ENSPKIG00000005509) #17	gnl2 (ENSPKIG00000005438) #18	dnali1 (ENSPKIG00000005377) #19	SNIP1 (ENSPKIG00000005359) #20	ENSPKIG00000005338 #21	map7d1a (ENSPKIG00000005222) #22	THRAP3 (ENSPKIG00000005150) #23	sh3d21 (ENSPKIG00000005110) #24	eva1ba (ENSPKIG00000005092) #25	STK40 (ENSPKIG00000005059) #26	OSCP1 (ENSPKIG00000004997) #27	ENSPKIG00000004957	mrps15 (ENSPKIG00000004939) #29	csf3r (ENSPKIG00000004855) #30	GRIK3 (ENSPKIG00000004789) #31	zc3h12ab (ENSPKIG00000004769) #32	sf3a3 (ENSPKIG00000004719)	INPP5B (ENSPKIG00000004669) #35	mtf1 (ENSPKIG00000004616) #36	yrdc (ENSPKIG00000004574) #37	maneal (ENSPKIG00000004548)
Asian bonytongue	MODERN SPECIES	9	akirin1 (ENSSFOG00015020545) #9	rhbdl2 (ENSSFOG00015020519) #10	GJA9 (ENSSFOG00015020499) #11	MYCBP (ENSSFOG00015020481) #12	rragca (ENSSFOG00015020466) #13	pou3f1 (ENSSFOG00015029682) #14	utp11 (ENSSFOG00015020388) #15	FHL3 (ENSSFOG00015020369) #16	meaf6 (ENSSFOG00015020331)	rspo1 (ENSSFOG00015020311) #17	gnl2 (ENSSFOG00015020300) #18	dnali1 (ENSSFOG00015020284) #19	dnali1 (ENSSFOG00015020255) #19	SNIP1 (ENSSFOG00015020244) #20	ENSSFOG00015020153 #21	map7d1a (ENSSFOG00015020090) #22	ENSSFOG00015020057 #23	sh3d21 (ENSSFOG00015020035) #24	ENSSFOG00015020021	ENSSFOG00015020010	lim2.5 (ENSSFOG00015019992)	ENSSFOG00015032389	ENSSFOG00015019971	ENSSFOG00015019955	xrcc1 (ENSSFOG00015019923)	drd2l (ENSSFOG00015019901)	ENSSFOG00015019876	ethe1 (ENSSFOG00015019848)	ENSSFOG00015019826	si:dkey-211g8.1 (ENSSFOG00015019812)	ENSSFOG00015019774
Osteoglossocephalai	ANCESTRAL SPECIES	119											ENSGT01090000260070.C.b ##11	ENSGT00390000017974.ob ##12	ENSGT00950000183028.a.b.b ##16	ENSGT00390000015257	ENSGT00390000011598	ENSGT00950000182941.a.a.b.e.b ##22	ENSGT01050000246199	ENSGT00560000078630	ENSGT00950000183008.a.a.a.b	ENSGT00940000160424	ENSGT00940000158242	ENSGT00950000183053.D	ENSGT00390000008812.b.a	ENSGT00940000158053	ENSGT00940000164496.a.a	ENSGT00950000182978.B	ENSGT01090000260093.b.f	ENSGT01090000260093.b.e	ENSGT00940000156213	ENSGT00530000063698.b	ENSGT00940000157833.h.a
Clupeocephala	ANCESTRAL SPECIES	19	ENSGT00940000160140.a.a	ENSGT00950000183145.C	ENSGT00940000156934.k	ENSGT00390000007597	ENSGT00530000063023.A.b	ENSGT00940000157751	ENSGT00390000014274	ENSGT00940000156338.b	ENSGT00940000164147.b	ENSGT00940000154450.tc	ENSGT01090000260070.C.b ##11	ENSGT00390000017974.ob ##12	ENSGT00950000183028.a.b.b ##16	ENSGT00390000015257	ENSGT00390000011598	ENSGT00950000182941.a.a.b.e.b ##22	ENSGT00950000183163.a.a.bb ##23	ENSGT00940000154096.b.b.b.b.a ##25	ENSGT00510000048364	ENSGT00390000004808.f ##27	ENSGT00390000010118.c.a.b	ENSGT00940000155107.a.a.b ##32	ENSGT00560000078630	ENSGT00950000183008.a.a.a.b	ENSGT00940000160424	ENSGT00940000158242	ENSGT00950000183053.D	ENSGT00390000008812.b.a	ENSGT00940000158053	ENSGT00940000164496.a.a	ENSGT00950000182978.B
Otomorpha	ANCESTRAL SPECIES	9	ENSGT00940000160140.a.a	ENSGT00950000183145.C	ENSGT00940000156934.k	ENSGT00390000007597	ENSGT00530000063023.A.b	ENSGT00940000157751	ENSGT00390000014274	ENSGT00940000156338.b	ENSGT00940000164147.b	ENSGT00940000154450.tc	ENSGT01090000260070.C.b ##11	ENSGT00390000017974.ob ##12	ENSGT00950000183028.a.b.b ##16	ENSGT00390000015257	ENSGT00390000011598	ENSGT00950000182941.a.a.b.e.b ##22	ENSGT00950000183163.a.a.bb ##23	ENSGT00940000154096.b.b.b.b.a ##25	ENSGT00510000048364	ENSGT00390000004808.f ##27	ENSGT00390000010118.c.a.b	ENSGT00940000155107.a.a.b ##32	ENSGT00560000078630	ENSGT00950000183008.a.a.a.b	ENSGT00940000160424	ENSGT00940000158242	ENSGT00950000183053.D	ENSGT01030000234575.c.a.a.a.a.a.a.b.b.a.a.b	ENSGT00390000008812.b.a	ENSGT00940000158053	ENSGT00940000164496.a.a
Otophysi	ANCESTRAL SPECIES	174	ENSGT00390000002843.b	ENSGT00940000154708	ENSGT00910000144740	ENSGT00510000049347.h	ENSGT00940000154725.i	ENSGT00940000154725.j.a	ENSGT00940000157280.l	ENSGT00940000156079	ENSGT00940000162238.a.a	ENSGT00940000163557.C	ENSGT00940000159791	ENSGT00390000006486	ENSGT00950000183028.a.b.b ##16	ENSGT00390000015257	ENSGT00390000011598	ENSGT00950000182941.a.a.b.e.b ##22	ENSGT00950000183163.a.a.bb ##23	ENSGT00940000154096.b.b.b.b.a ##25	ENSGT00510000048364	ENSGT00390000004808.f ##27	ENSGT00390000010118.c.a.b	ENSGT00940000155107.a.a.b ##32	ENSGT00560000078630	ENSGT00950000183008.a.a.a.b	ENSGT00940000160424	ENSGT00940000158242	ENSGT00950000183053.D	ENSGT01030000234575.c.a.a.a.a.a.a.b.b.a.a.b	ENSGT00390000004215.a.b.b.c.b.c	ENSGT01060000248801	ENSGT00740000117011
Characiphysae	ANCESTRAL SPECIES	91	ENSGT00940000154708	ENSGT00910000144740	ENSGT00510000049347.h	ENSGT00940000154725.i	ENSGT00940000154725.j.a	ENSGT00940000157280.l	ENSGT00940000156079	ENSGT00940000162238.a.a	ENSGT00940000163557.C	ENSGT00940000159791	ENSGT00390000006486	ENSGT00950000183031.A.a.a #13	ENSGT00950000183028.a.b.b ##16	ENSGT00390000015257	ENSGT00390000011598	ENSGT00950000182941.a.a.b.e.b ##22	ENSGT00950000183163.a.a.bb ##23	ENSGT00940000154096.b.b.b.b.a ##25	ENSGT00510000048364	ENSGT00390000004808.f ##27	ENSGT00940000177439	ENSGT00940000155107.a.a.b ##32	ENSGT00940000162796	ENSGT01090000260400	ENSGT00950000183175.B.a	ENSGT01030000234543.A.b	ENSGT00940000160581	ENSGT00940000166166	ENSGT00940000155429.b	ENSGT00950000183054.a.a.b	ENSGT00390000006954
Characiphysae_b	ANCESTRAL SPECIES	92	ENSGT00390000002843.b	ENSGT00940000154708	ENSGT00910000144740	ENSGT00510000049347.h	ENSGT00940000154725.i	ENSGT00940000154725.j.a	ENSGT00940000157280.l	ENSGT00940000156079	ENSGT00940000162238.a.a	ENSGT00940000163557.C	ENSGT00940000159791	ENSGT00390000006486	ENSGT00950000183028.a.b.b ##16	ENSGT00390000015257	ENSGT00390000011598	ENSGT00950000182941.a.a.b.e.b ##22	ENSGT00950000183163.a.a.bb ##23	ENSGT00940000154096.b.b.b.b.a ##25	ENSGT00510000048364	ENSGT00390000004808.f ##27	ENSGT00940000177439	ENSGT00940000155107.a.a.b ##32	ENSGT00970000195294	ENSGT00940000162796	ENSGT01090000260400	ENSGT00950000183175.B.a	ENSGT01030000234543.A.b	ENSGT00940000160581	ENSGT00940000166166	ENSGT00940000155429.b	ENSGT00950000183054.a.a.b
Characoidei	ANCESTRAL SPECIES	178	ENSGT00390000002843.b	ENSGT00940000154708	ENSGT00910000144740	ENSGT00510000049347.h	ENSGT00940000154725.i	ENSGT00940000154725.j.a	ENSGT00940000157280.l	ENSGT00940000156079	ENSGT00940000162238.a.a	ENSGT00940000163557.C	ENSGT00940000159791	ENSGT00390000006486	ENSGT00950000183028.a.b.b ##16	ENSGT00390000015257	ENSGT00390000011598	ENSGT00950000182941.a.a.b.e.b ##22	ENSGT00950000183163.a.a.bb ##23	ENSGT00940000154096.b.b.b.b.a ##25	ENSGT00510000048364	ENSGT00390000004808.f ##27	ENSGT00940000177439	ENSGT00940000155107.a.a.b ##32	ENSGT00970000195294	ENSGT00940000162796	ENSGT01090000260400	ENSGT00950000183175.B.a
Mexicana tetra	MODERN SPECIES	65							FAM135B (ENSAMXG00000017175)	ENSAMXG00000036148	ENSAMXG00000019441	kcnk9 (ENSAMXG00000019517)	ENSAMXG00000038821	TRAPPC9 (ENSAMXG00000020787)	fhl3b (ENSAMXG00000032557) ##16	meaf6 (ENSAMXG00000030458)	stpg1 (ENSAMXG00000020849)	map7d1b (ENSAMXG00000020859) ##22	thrap3b (ENSAMXG00000020877) ##23	eva1bb (ENSAMXG00000041367) ##25	LSM10 (ENSAMXG00000025301)	oscp1a (ENSAMXG00000039731) ##27	ENSAMXG00000041581	ENSAMXG00000031811	zc3h12ab (ENSAMXG00000029641) ##32	ENSAMXG00000041625	ENSAMXG00000030542	sncb (ENSAMXG00000043895)
Red-bellied piranha	MODERN SPECIES	263							ENSPNAG00000004348	ENSPNAG00000028401	ENSPNAG00000028469	ENSPNAG00000028491	kcnk9 (ENSPNAG00000028505)	TRAPPC9 (ENSPNAG00000005622)	fhl3b (ENSPNAG00000004889) ##16	meaf6 (ENSPNAG00000028667)	stpg1 (ENSPNAG00000004405)	map7d1b (ENSPNAG00000004418) ##22	thrap3b (ENSPNAG00000028762) ##23	eva1bb (ENSPNAG00000004796) ##25	LSM10 (ENSPNAG00000028829)	oscp1a (ENSPNAG00000004456) ##27	ENSPNAG00000005053	ENSPNAG00000028945
Electric eel	MODERN SPECIES	898												rragcb (ENSEEEG00000021258) #13	fhl3b (ENSEEEG00000021257) ##16	meaf6 (ENSEEEG00000021256)	stpg1 (ENSEEEG00000021255)	map7d1b (ENSEEEG00000021254) ##22	thrap3b (ENSEEEG00000021253) ##23	eva1bb (ENSEEEG00000021251) ##25	LSM10 (ENSEEEG00000021247)	ENSEEEG00000021246
Channel catfish	MODERN SPECIES	5	ENSIPUG00000004942	ST3GAL1 (ENSIPUG00000004950)	ST3GAL1 (ENSIPUG00000004976)	khdrbs3 (ENSIPUG00000004984)	ENSIPUG00000005001	fam135b (ENSIPUG00000005028)	ENSIPUG00000005100	ENSIPUG00000005154	kcnk9 (ENSIPUG00000005285)	TRAPPC9 (ENSIPUG00000005309)	rragcb (ENSIPUG00000005440) #13	fhl3b (ENSIPUG00000005470) ##16	ENSIPUG00000005538	meaf6 (ENSIPUG00000005566)	stpg1 (ENSIPUG00000005620)	map7d1b (ENSIPUG00000005646) ##22	thrap3b (ENSIPUG00000005707) ##23	eva1bb (ENSIPUG00000005771) ##25	ENSIPUG00000005788	LSM10 (ENSIPUG00000005808)	oscp1a (ENSIPUG00000005816) ##27	zc3h12ab (ENSIPUG00000005852) ##32	ENSIPUG00000005858	sncb (ENSIPUG00000005865)	LRRTM2 (ENSIPUG00000005874)	CTNNA1 (ENSIPUG00000005901)	lrrtm2 (ENSIPUG00000005981)	MCHR2 (ENSIPUG00000005988)	tspan17 (ENSIPUG00000006010)	synpo (ENSIPUG00000006100)	dctn4 (ENSIPUG00000006111)
Cyprinoidei	ANCESTRAL SPECIES	35	ENSGT00730000111283.a	ENSGT00940000157595	ENSGT00940000153845.a.a	ENSGT00940000154725.j.a.a.a.a.a.a	ENSGT00940000154725.j.a.a.a.a.b	ENSGT00940000154725.j.b	ENSGT00940000157280.l	ENSGT00940000156079	ENSGT00940000162238.a.a	ENSGT00940000159308	ENSGT00940000159791	ENSGT00390000006486	ENSGT00950000183028.a.b.b ##16	ENSGT00390000015257	ENSGT00390000011598	ENSGT00950000182941.a.a.b.e.b ##22	ENSGT00950000183163.a.a.bb ##23	ENSGT00940000154096.b.b.b.b.a ##25	ENSGT00510000048364	ENSGT00390000004808.f ##27	ENSGT00390000010118.c.a.b	ENSGT00940000155107.a.a.b ##32	ENSGT00560000078630	ENSGT00950000183008.a.a.a.b	ENSGT00940000160424	ENSGT00940000158242	ENSGT00950000183053.D	ENSGT01030000234592.A.a.b.c	ENSGT01030000234575.c.a.a.a.a.a.a.b.b.a.a.b.a.a.b	ENSGT00390000004215.a.b.b.c.b.c	ENSGT01060000248801
Cyprininae	DUPLICATION
Cyprininae	ANCESTRAL SPECIES	143	ENSGT00390000006486.i.b	ENSGT00950000183031.A.a.a.sd.a #13	ENSGT00950000183028.a.b.b.g ##16	ENSGT00390000015257.b.b	ENSGT00390000011598.b	ENSGT00950000182941.a.a.b.e.b.b ##22	ENSGT00950000183163.a.a.bb.a ##23	ENSGT00940000154096.b.b.b.b.a.c ##25	ENSGT00510000048364	ENSGT00390000004808.f.a ##27	ENSGT00390000010118.c.a.b	ENSGT00940000155107.a.a.b.a ##32	ENSGT01040000240385.A.b.b.b.a.a.b.a.b.a.b.b.b.a.a.a.b	ENSGT00390000015257.a	ENSGT00390000011598.a.a	ENSGT00950000182941.a.a.b.e.b.a ##22	ENSGT00950000183163.a.a.bb.b ##23	ENSGT00940000154096.b.b.b.b.a.d ##25	ENSGT00940000181189	ENSGT00390000004808.f.b ##27	ENSGT00940000155107.a.a.b.b ##32	ENSGT00560000078630.b	ENSGT00560000078630.a.a.a	ENSGT00950000183008.a.a.a.b.d	ENSGT00940000160424.l	ENSGT00940000158242.i	ENSGT00950000183053.D.i	ENSGT01030000234592.A.a.b.c.b	ENSGT01030000234575.c.a.a.a.a.a.a.b.b.a.a.b.a.a.a.a	ENSGT01030000234575.c.a.a.a.a.a.a.b.b.a.a.b.b.c	ENSGT00390000004215.a.b.b.c.b.c.a
Goldfish	MODERN SPECIES	10	sdha (ENSCARG00000003802)	rxrba (ENSCARG00000004767)	col11a2 (ENSCARG00000005224)	ENSCARG00000005471	brd2a (ENSCARG00000005514)	tap2a (ENSCARG00000005599)	ENSCARG00000007227	zdhhc3b (ENSCARG00000007261)	ehmt2 (ENSCARG00000007556)	ENSCARG00000013613	ENSCARG00000013630	meaf6 (ENSCARG00000013724)	ENSCARG00000013777	ENSCARG00000013783	stpg1 (ENSCARG00000013790)	map7d1b (ENSCARG00000013800) ##22	thrap3b (ENSCARG00000013814) ##23	eva1bb (ENSCARG00000013820) ##25	LSM10 (ENSCARG00000013829)	zc3h12ab (ENSCARG00000013835) ##32	ENSCARG00000013843	smim13 (ENSCARG00000013854)	nedd9 (ENSCARG00000013862)	TMEM170B (ENSCARG00000013871)	HIVEP1 (ENSCARG00000013876)	edn1 (ENSCARG00000013880)	ENSCARG00000013901	ENSCARG00000013905	ENSCARG00000013915	ENSCARG00000013920	zgc:86598 (ENSCARG00000013937)
Cyprininae_a	ANCESTRAL SPECIES	43	ENSGT00940000154725.j.a.a.a.a.b	ENSGT00940000154725.j.a.a.a.a.a.b.b	ENSGT00940000154725.j.b.b	ENSGT00940000157280.l.b.a	ENSGT00940000156079.d	ENSGT00940000162238.a.a	ENSGT00940000163557.C	ENSGT00940000159791.w	ENSGT00390000006486.i.b	ENSGT00950000183031.A.a.a.sd.a #13	ENSGT00950000183028.a.b.b.g ##16	ENSGT00390000015257.b.b	ENSGT00390000011598.b	ENSGT00390000015257.a	ENSGT00390000011598.a.a	ENSGT00950000182941.a.a.b.e.b.a ##22	ENSGT00950000183163.a.a.bb.b ##23	ENSGT00940000154096.b.b.b.b.a.d ##25	ENSGT00940000181189	ENSGT00390000004808.f.b ##27	ENSGT00940000155107.a.a.b.b ##32	ENSGT00560000078630.a.a.a	ENSGT00950000183008.a.a.a.b.d	ENSGT00940000160424.l	ENSGT00940000158242.i	ENSGT00950000183053.D.i	ENSGT01030000234592.A.a.b.c.b	ENSGT01030000234575.c.a.a.a.a.a.a.b.b.a.a.b.b.c	ENSGT00390000004215.a.b.b.c.b.c.a	ENSGT00940000163549.d	ENSGT00940000161897.b.a.b
Golden-line barbel	MODERN SPECIES	431									ENSSGRG00000044341	kcnk9 (ENSSGRG00000044345)	TRAPPC9 (ENSSGRG00000044348)	rragcb (ENSSGRG00000044382) #13	fhl3b (ENSSGRG00000044387) ##16	ENSSGRG00000044389	stpg1 (ENSSGRG00000044390)	map7d1b (ENSSGRG00000044391) ##22	thrap3b (ENSSGRG00000044395) ##23	eva1bb (ENSSGRG00000044399) ##25	oscp1a (ENSSGRG00000044401) ##27	ENSSGRG00000044403	zc3h12ab (ENSSGRG00000044406) ##32	smim13 (ENSSGRG00000044408)	nedd9 (ENSSGRG00000044409)	HIVEP1 (ENSSGRG00000044413)	edn1 (ENSSGRG00000044414)	ENSSGRG00000044415	ENSSGRG00000044416
Common carp reference	MODERN SPECIES	12	ST3GAL1 (ENSCCRG00000035652)	KHDRBS3 (ENSCCRG00000071461)	FAM135B (ENSCCRG00000067822)	ENSCCRG00000066020	ENSCCRG00000064829	ENSCCRG00000034730	kcnk9 (ENSCCRG00000079282)	TRAPPC9 (ENSCCRG00000022158)	ENSCCRG00000052992	rragcb (ENSCCRG00000018138) #13	fhl3b (ENSCCRG00000024062) ##16	ENSCCRG00000073470	ENSCCRG00000060628	meaf6 (ENSCCRG00000031868)	stpg1 (ENSCCRG00000031856)	map7d1b (ENSCCRG00000038821) ##22	thrap3b (ENSCCRG00000038825) ##23	eva1bb (ENSCCRG00000038827) ##25	oscp1a (ENSCCRG00000022844) ##27	zc3h12ab (ENSCCRG00000081392) ##32	smim13 (ENSCCRG00000074273)	nedd9 (ENSCCRG00000022862)	TMEM170B (ENSCCRG00000005805)	HIVEP1 (ENSCCRG00000005836)	edn1 (ENSCCRG00000005841)	ENSCCRG00000058333	ENSCCRG00000070436	ENSCCRG00000044535	si:ch211-133n4.6 (ENSCCRG00000059589)	stm (ENSCCRG00000049053)	si:ch211-80h18.1 (ENSCCRG00000003110)
Cyprininae	ANCESTRAL SPECIES	143			ENSGT00940000154725.j.a.a.a.a.a.a.a.b	ENSGT00940000154725.j.a.a.a.a.b	ENSGT00940000154725.j.a.a.a.a.a.b.b	ENSGT00940000154725.j.b.b	ENSGT00940000157280.l.b.a	ENSGT00940000156079.d	ENSGT00940000163557.C	ENSGT00940000159791.w	ENSGT00390000006486.i.b	ENSGT00950000183031.A.a.a.sd.a #13	ENSGT00950000183028.a.b.b.g ##16	ENSGT00390000015257.b.b	ENSGT00390000011598.b	ENSGT00950000182941.a.a.b.e.b.b ##22	ENSGT00950000183163.a.a.bb.a ##23	ENSGT00940000154096.b.b.b.b.a.c ##25	ENSGT00510000048364	ENSGT00390000004808.f.a ##27	ENSGT00390000010118.c.a.b	ENSGT00940000155107.a.a.b.a ##32	ENSGT01040000240385.A.b.b.b.a.a.b.a.b.a.b.b.b.a.a.a.b	ENSGT00390000015257.a	ENSGT00390000011598.a.a	ENSGT00950000182941.a.a.b.e.b.a ##22	ENSGT00950000183163.a.a.bb.b ##23	ENSGT00940000154096.b.b.b.b.a.d ##25	ENSGT00940000181189	ENSGT00390000004808.f.b ##27	ENSGT00940000155107.a.a.b.b ##32
Cyprininae_a	ANCESTRAL SPECIES	80	ENSGT00940000159051.a.b	ENSGT00730000111283.a.c.b	ENSGT00940000157595.h	ENSGT00940000153845.a.a.c	ENSGT00940000154725.j.a.a.b	ENSGT00940000154725.j.a.a.a.a.a.b.a	ENSGT00940000154725.j.b.a.a	ENSGT00940000154725.j.a.a.a.a.a.a.b	ENSGT00940000157280.l.b.b	ENSGT00940000156079.c	ENSGT00940000159791.x	ENSGT00390000006486.i.a	ENSGT00950000183031.A.a.a.sd.b #13	ENSGT00950000183028.a.b.b.h ##16	ENSGT00390000015257.b.a.b	ENSGT00950000182941.a.a.b.e.b.b ##22	ENSGT00950000183163.a.a.bb.a ##23	ENSGT00940000154096.b.b.b.b.a.c ##25	ENSGT00510000048364	ENSGT00390000004808.f.a ##27	ENSGT00390000010118.c.a.b	ENSGT00940000155107.a.a.b.a ##32	ENSGT01040000240385.A.b.b.b.a.a.b.a.b.a.b.b.b.a.a.a.b	ENSGT00560000078630.a.b	ENSGT00950000183008.a.a.a.b.c	ENSGT00940000160424.k	ENSGT00940000158242.j	ENSGT00950000183053.D.j	ENSGT01030000234592.A.a.b.c.a.b.a.a	ENSGT01030000234575.c.a.a.a.a.a.a.b.b.a.a.b.a.a.b.b	ENSGT01030000234575.c.a.a.a.a.a.a.b.b.a.a.b.a.a.a.b
Common carp reference	MODERN SPECIES	31	ST3GAL1 (ENSCCRG00000077098)	ST3GAL1 (ENSCCRG00000060275)	ENSCCRG00000014824	ENSCCRG00000068801	KHDRBS3 (ENSCCRG00000039121)	FAM135B (ENSCCRG00000032935)	ENSCCRG00000075899	ENSCCRG00000070761	kcnk9 (ENSCCRG00000006675)	TRAPPC9 (ENSCCRG00000039699)	ENSCCRG00000066644	rragcb (ENSCCRG00000024063) #13	fhl3b (ENSCCRG00000047959) ##16	meaf6 (ENSCCRG00000031916)	stpg1 (ENSCCRG00000031912)	map7d1b (ENSCCRG00000045480) ##22	thrap3b (ENSCCRG00000039036) ##23	oscp1a (ENSCCRG00000000431) ##27	ENSCCRG00000000453	zc3h12ab (ENSCCRG00000043038) ##32	ENSCCRG00000073888	smim13 (ENSCCRG00000039594)	nedd9 (ENSCCRG00000043022)	TMEM170B (ENSCCRG00000056870)	HIVEP1 (ENSCCRG00000064435)	edn1 (ENSCCRG00000072509)	ENSCCRG00000005832	ENSCCRG00000079612	ENSCCRG00000062069	ENSCCRG00000066055	ENSCCRG00000058987
Golden-line barbel	MODERN SPECIES	693										TRAPPC9 (ENSSGRG00000005537)	ENSSGRG00000005851	rragcb (ENSSGRG00000005854) #13	fhl3b (ENSSGRG00000005855) ##16	meaf6 (ENSSGRG00000005860)	stpg1 (ENSSGRG00000005863)	map7d1b (ENSSGRG00000005866) ##22	thrap3b (ENSSGRG00000005870) ##23	eva1bb (ENSSGRG00000005877) ##25	LSM10 (ENSSGRG00000005878)	oscp1a (ENSSGRG00000005880) ##27	zc3h12ab (ENSSGRG00000005885) ##32	ENSSGRG00000005887	smim13 (ENSSGRG00000005888)	nedd9 (ENSSGRG00000005890)	TMEM170B (ENSSGRG00000005891)	HIVEP1 (ENSSGRG00000005892)	edn1 (ENSSGRG00000005893)	ENSSGRG00000005896	ENSSGRG00000005938	ENSSGRG00000005986	ENSSGRG00000005991
Goldfish	DUPLICATION
Goldfish	MODERN SPECIES	38	stpg1 (ENSCARG00000027732)	meaf6 (ENSCARG00000027707)	ENSCARG00000027676	ENSCARG00000027669	ENSCARG00000027653	ENSCARG00000027628	zgc:86598 (ENSCARG00000027280)	FAM135B (ENSCARG00000027192)	ENSCARG00000027155	ENSCARG00000027135	kcnk9 (ENSCARG00000027122)	TRAPPC9 (ENSCARG00000027040)	rragcb (ENSCARG00000026997) #13	fhl3b (ENSCARG00000026986) ##16	meaf6 (ENSCARG00000026941)	map7d1b (ENSCARG00000026890) ##22	thrap3b (ENSCARG00000026833) ##23	eva1bb (ENSCARG00000066705) ##25	LSM10 (ENSCARG00000066701)	oscp1a (ENSCARG00000066679) ##27	ENSCARG00000066670	zc3h12ab (ENSCARG00000066658) ##32	ENSCARG00000066574	smim13 (ENSCARG00000066566)	nedd9 (ENSCARG00000066558)	ENSCARG00000066545	clk2a (ENSCARG00000066066)	si:ch211-81a5.8 (ENSCARG00000066027)	ENSCARG00000066017	ndufv1 (ENSCARG00000065911)	ENSCARG00000065800
Goldfish	MODERN SPECIES	38	meaf6 (ENSCARG00000026941)	fhl3b (ENSCARG00000026986) ##16	rragcb (ENSCARG00000026997) #13	TRAPPC9 (ENSCARG00000027040)	kcnk9 (ENSCARG00000027122)	ENSCARG00000027135	ENSCARG00000027155	FAM135B (ENSCARG00000027192)	zgc:86598 (ENSCARG00000027280)	ENSCARG00000027628	ENSCARG00000027653	ENSCARG00000027669	ENSCARG00000027676	meaf6 (ENSCARG00000027707)	stpg1 (ENSCARG00000027732)	map7d1b (ENSCARG00000027760) ##22	ENSCARG00000027768	eva1bb (ENSCARG00000027776) ##25	LSM10 (ENSCARG00000027782)	oscp1a (ENSCARG00000027787) ##27	ENSCARG00000027799	zc3h12ab (ENSCARG00000027812) ##32	ENSCARG00000027832	smim13 (ENSCARG00000027974)	nedd9 (ENSCARG00000027982)	ENSCARG00000028022	gsk3aa (ENSCARG00000028048)	GRIK5 (ENSCARG00000028160)	ENSCARG00000029734	zgc:174904 (ENSCARG00000029741)	pdk2b (ENSCARG00000029746)
Zebrafish	MODERN SPECIES	10	ENSDARG00000079310	ENSDARG00000079654	kcnk9 (ENSDARG00000104563)	ENSDARG00000103106	TRAPPC9 (ENSDARG00000099118)	rragcb (ENSDARG00000099049) #13	fhl3b (ENSDARG00000104315) ##16	ENSDARG00000100909	ENSDARG00000105241	btr25 (ENSDARG00000102018)	ENSDARG00000102143	ENSDARG00000099509	meaf6 (ENSDARG00000101216)	stpg1 (ENSDARG00000103765)	ENSDARG00000113654	map7d1b (ENSDARG00000104701) ##22	ENSDARG00000101490 ##22	ENSDARG00000103395 ##22	ENSDARG00000102533 ##22	ENSDARG00000089402 ##22	thrap3b (ENSDARG00000098228) ##23	eva1bb (ENSDARG00000100698) ##25	LSM10 (ENSDARG00000101222)	oscp1a (ENSDARG00000104403) ##27	zc3h12ab (ENSDARG00000101034) ##32	ENSDARG00000100046	ENSDARG00000105283	ENSDARG00000102913	ENSDARG00000102992	ENSDARG00000100450	btr18 (ENSDARG00000103618)
Clupeiformes	ANCESTRAL SPECIES	42										ENSGT01030000235133.c	ENSGT01090000260070.C.b ##11	ENSGT00390000017974.ob ##12	ENSGT00950000183028.a.b.b ##16	ENSGT00390000015257.d	ENSGT00390000011598	ENSGT00950000182941.a.a.b.e.b ##22	ENSGT00950000183163.a.a.bb ##23	ENSGT00940000154096.b.b.b.b.a ##25	ENSGT00510000048364	ENSGT00390000004808.f ##27	ENSGT00390000010118.c.a.b	ENSGT00940000155107.a.a.b ##32	ENSGT00560000078630	ENSGT00950000183008.a.a.a.b	ENSGT00940000160424	ENSGT00940000158242	ENSGT00950000183053.D	ENSGT01030000234575.c.a.a.a.a.a.a.b.b.a.a.b.i	ENSGT00390000008812.b.a	ENSGT00940000158053	ENSGT00940000164496.a.a
Denticle herring	MODERN SPECIES	12	ehmt2 (ENSDCDG00000011830)	ENSDCDG00000011588	slc44a4 (ENSDCDG00000007527)	RNF5 (ENSDCDG00000007104)	ENSDCDG00000007061	ENSDCDG00000007050	mhc1zka (ENSDCDG00000006963)	ENSDCDG00000006887	gja9b (ENSDCDG00000006875) ##11	mycbp (ENSDCDG00000005973) ##12	ENSDCDG00000005859	ENSDCDG00000005755 #13	fhl3b (ENSDCDG00000035449) ##16	meaf6 (ENSDCDG00000035448)	stpg1 (ENSDCDG00000035447)	map7d1b (ENSDCDG00000035444) ##22	thrap3b (ENSDCDG00000035440) ##23	eva1bb (ENSDCDG00000035438) ##25	LSM10 (ENSDCDG00000035437)	oscp1a (ENSDCDG00000035436) ##27	zc3h12ab (ENSDCDG00000035435) ##32	smim13 (ENSDCDG00000035434)	nedd9 (ENSDCDG00000035433)	TMEM170B (ENSDCDG00000035431)	HIVEP1 (ENSDCDG00000035429)	edn1 (ENSDCDG00000035426)	illr1 (ENSDCDG00000035425)	si:dkeyp-92c9.2 (ENSDCDG00000035424)	myo1g (ENSDCDG00000035308)	rxrba (ENSDCDG00000035254)	col11a2 (ENSDCDG00000035209)
Atlantic herring	MODERN SPECIES	10	PI4KB (ENSCHAG00000010721)	gabpb2a (ENSCHAG00000011246)	ENSCHAG00000011296	ctnnb2 (ENSCHAG00000011330)	ENSCHAG00000012419	ENSCHAG00000000551	ENSCHAG00000000596	ENSCHAG00000000655	ENSCHAG00000000674	gja9b (ENSCHAG00000000710) ##11	mycbp (ENSCHAG00000000761) ##12	rragca (ENSCHAG00000000775) #13	fhl3b (ENSCHAG00000000790) ##16	meaf6 (ENSCHAG00000000917)	stpg1 (ENSCHAG00000001040)	map7d1b (ENSCHAG00000001085) ##22	thrap3b (ENSCHAG00000001178) ##23	eva1bb (ENSCHAG00000001235) ##25	LSM10 (ENSCHAG00000001270)	oscp1a (ENSCHAG00000001289) ##27	ENSCHAG00000001342	smim13 (ENSCHAG00000001366)	nedd9 (ENSCHAG00000001391)	TMEM170B (ENSCHAG00000001423)	HIVEP1 (ENSCHAG00000001481)	edn1 (ENSCHAG00000001595)	ENSCHAG00000001663	ENSCHAG00000001909	ENSCHAG00000001932	dlgap3 (ENSCHAG00000002240)	ENSCHAG00000002422
Euteleosteomorpha	ANCESTRAL SPECIES	12	ENSGT00950000183145.C	ENSGT00940000156934.k	ENSGT00390000007597	ENSGT00530000063023.A.b	ENSGT00940000157751	ENSGT00390000014274	ENSGT00940000156338.b	ENSGT00940000164147.b	ENSGT00940000160519.a.b	ENSGT00940000154450.tc	ENSGT01090000260070.C.b ##11	ENSGT00390000017974.ob ##12	ENSGT00950000183028.a.b.b ##16	ENSGT00390000015257	ENSGT00390000011598	ENSGT00950000182941.a.a.b.e.b ##22	ENSGT00950000183163.a.a.bb ##23	ENSGT00940000154096.b.b.b.b.a ##25	ENSGT00510000048364	ENSGT00390000004808.f ##27	ENSGT00390000010118.c.a.b	ENSGT00940000155107.a.a.b ##32	ENSGT00560000078630	ENSGT00950000183008.a.a.a.b	ENSGT00940000160424	ENSGT00940000158242	ENSGT00950000183053.D	ENSGT00390000008812.b.a	ENSGT00940000158053	ENSGT00940000164496.a.a	ENSGT00950000182978.B
Acanthomorphata	ANCESTRAL SPECIES	70	ENSGT00390000008551	ENSGT00940000163648.b	ENSGT00940000158729	ENSGT00390000012738	ENSGT00940000169005	ENSGT00390000010028	ENSGT00640000091536	ENSGT00950000182848.c.b.b.a	ENSGT00390000013601	ENSGT00940000157613	ENSGT00390000017955.c	ENSGT00940000156790	ENSGT00950000183028.a.b.b ##16	ENSGT00390000015257	ENSGT00390000011598	ENSGT00950000182941.a.a.b.e.b ##22	ENSGT00950000183163.a.a.bb ##23	ENSGT00940000154096.b.b.b.b.a ##25	ENSGT00510000048364	ENSGT00390000004808.f ##27	ENSGT00390000010118.c.a.b	ENSGT00940000155107.a.a.b ##32	ENSGT00560000078630	ENSGT00950000183008.a.a.a.b	ENSGT00940000160424	ENSGT00940000158242	ENSGT00950000183053.D	ENSGT00390000008812.b.a	ENSGT00940000158053	ENSGT00940000164496.a.a	ENSGT00950000182978.B
Euacanthomorphacea	ANCESTRAL SPECIES	24	ENSGT00390000008551	ENSGT00940000163648.b	ENSGT00940000158729	ENSGT00390000012738	ENSGT00940000169005	ENSGT00390000010028	ENSGT00640000091536	ENSGT00950000182848.c.b.b.a	ENSGT00390000013601	ENSGT00940000157613	ENSGT00390000017955.c	ENSGT00940000156790	ENSGT00950000183028.a.b.b ##16	ENSGT00390000015257	ENSGT00390000011598	ENSGT00950000182941.a.a.b.e.b ##22	ENSGT00950000183163.a.a.bb ##23	ENSGT00940000154096.b.b.b.b.a ##25	ENSGT00510000048364	ENSGT00390000004808.f ##27	ENSGT00390000010118.c.a.b	ENSGT00940000155107.a.a.b ##32	ENSGT00560000078630	ENSGT00950000183008.a.a.a.b	ENSGT00940000160424	ENSGT00940000158242	ENSGT00950000183053.D	ENSGT00390000008812.b.a	ENSGT00940000158053	ENSGT00940000164496.a.a	ENSGT00950000182978.B
Pinecone sodierfish	MODERN SPECIES	2	ENSMMDG00005021937	ago4 (ENSMMDG00005021010)	CLSPN (ENSMMDG00005020985)	ENSMMDG00005020984	cdca5 (ENSMMDG00005020983)	psmb2 (ENSMMDG00005020981)	tfap2e (ENSMMDG00005020979)	NCDN (ENSMMDG00005020974)	KIAA0319L (ENSMMDG00005019489)	cap1 (ENSMMDG00005019452)	ppt1 (ENSMMDG00005019225)	rragcb (ENSMMDG00005019217) #13	fhl3b (ENSMMDG00005019214) ##16	meaf6 (ENSMMDG00005019209)	stpg1 (ENSMMDG00005019205)	map7d1b (ENSMMDG00005019203) ##22	thrap3b (ENSMMDG00005019200) ##23	eva1bb (ENSMMDG00005019196) ##25	LSM10 (ENSMMDG00005019195)	oscp1a (ENSMMDG00005019191) ##27	ENSMMDG00005019189	ENSMMDG00005019186	ENSMMDG00005019184 ##32	zc3h12ab (ENSMMDG00005019182) ##32	smim13 (ENSMMDG00005019180)	nedd9 (ENSMMDG00005019178)	TMEM170B (ENSMMDG00005019175)	HIVEP1 (ENSMMDG00005019157)	edn1 (ENSMMDG00005019150)	ENSMMDG00005019149	myo1g (ENSMMDG00005019146)
Percomorphaceae	ANCESTRAL SPECIES	10	ENSGT00390000008551	ENSGT00940000163648.b	ENSGT00940000158729	ENSGT00390000012738	ENSGT00940000169005	ENSGT00390000010028	ENSGT00640000091536	ENSGT00950000182848.c.b.b.a	ENSGT00390000013601	ENSGT00940000157613	ENSGT00390000017955.c	ENSGT00940000156790	ENSGT00950000183028.a.b.b ##16	ENSGT00390000015257	ENSGT00390000011598	ENSGT00950000182941.a.a.b.e.b ##22	ENSGT00950000183163.a.a.bb ##23	ENSGT00940000154096.b.b.b.b.a ##25	ENSGT00510000048364	ENSGT00390000004808.f ##27	ENSGT00390000010118.c.a.b	ENSGT00940000155107.a.a.b ##32	ENSGT00560000078630	ENSGT00950000183008.a.a.a.b	ENSGT00940000160424	ENSGT00940000158242	ENSGT00950000183053.D	ENSGT00390000008812.b.a	ENSGT00940000158053	ENSGT00940000164496.a.a	ENSGT00950000182978.B
Tiger tail seahorse	MODERN SPECIES	328	c19h1orf109 (ENSHCOG00000003649)	cdca8 (ENSHCOG00000003685)	ago4 (ENSHCOG00000003725)	CLSPN (ENSHCOG00000003741)	ENSHCOG00000003758	ENSHCOG00000003772	psmb2 (ENSHCOG00000003803)	tfap2e (ENSHCOG00000003827)	NCDN (ENSHCOG00000003839)	KIAA0319L (ENSHCOG00000003961)	cap1 (ENSHCOG00000003977)	rragcb (ENSHCOG00000003986) #13	ppt1 (ENSHCOG00000004004)	fhl3b (ENSHCOG00000004026) ##16	meaf6 (ENSHCOG00000004069)	ENSHCOG00000004092 ##22	thrap3b (ENSHCOG00000004098) ##23	eva1bb (ENSHCOG00000004121) ##25	oscp1a (ENSHCOG00000004224) ##27	zc3h12ab (ENSHCOG00000004255) ##32	smim13 (ENSHCOG00000004269)	nedd9 (ENSHCOG00000004279)
Percomorphaceae_B	ANCESTRAL SPECIES	15	ENSGT00390000008551	ENSGT00940000163648.b	ENSGT00940000158729	ENSGT00390000012738	ENSGT00940000169005	ENSGT00390000010028	ENSGT00640000091536	ENSGT00950000182848.c.b.b.a	ENSGT00390000013601	ENSGT00940000157613	ENSGT00390000017955.c	ENSGT00940000156790	ENSGT00950000183028.a.b.b ##16	ENSGT00390000015257	ENSGT00390000011598	ENSGT00950000182941.a.a.b.e.b ##22	ENSGT00950000183163.a.a.bb ##23	ENSGT00940000154096.b.b.b.b.a ##25	ENSGT00510000048364	ENSGT00390000004808.f ##27	ENSGT00390000010118.c.a.b	ENSGT00940000155107.a.a.b ##32	ENSGT00560000078630	ENSGT00950000183008.a.a.a.b	ENSGT00940000160424	ENSGT00940000158242	ENSGT00950000183053.D	ENSGT00390000008812.b.a	ENSGT00940000158053	ENSGT00940000164496.a.a	ENSGT00950000182978.B
Ovalentaria	ANCESTRAL SPECIES	12	ENSGT00390000008551	ENSGT00940000163648.b	ENSGT00940000158729	ENSGT00390000012738	ENSGT00940000169005	ENSGT00390000010028	ENSGT00640000091536	ENSGT00950000182848.c.b.b.a	ENSGT00390000013601	ENSGT00940000157613	ENSGT00390000017955.c	ENSGT00940000156790	ENSGT00950000183028.a.b.b ##16	ENSGT00390000015257	ENSGT00390000011598	ENSGT00950000182941.a.a.b.e.b ##22	ENSGT00950000183163.a.a.bb ##23	ENSGT00940000154096.b.b.b.b.a ##25	ENSGT00510000048364	ENSGT00390000004808.f ##27	ENSGT00390000010118.c.a.b	ENSGT00940000155107.a.a.b ##32	ENSGT00560000078630	ENSGT00950000183008.a.a.a.b	ENSGT00940000160424	ENSGT00940000158242	ENSGT00950000183053.D	ENSGT00390000008812.b.a	ENSGT00940000158053	ENSGT00940000164496.a.a	ENSGT00950000182978.B
Atherinomorphae	ANCESTRAL SPECIES	52	ENSGT00390000011115	ENSGT00390000008551	ENSGT00940000163648.b	ENSGT00940000158729	ENSGT00390000012738	ENSGT00940000169005	ENSGT00390000010028	ENSGT00640000091536	ENSGT00950000182848.c.b.b.a	ENSGT00390000013601	ENSGT00940000157613	ENSGT00390000017955.c	ENSGT00940000156790	ENSGT00950000183028.a.b.b ##16	ENSGT00390000015257	ENSGT00950000182941.a.a.b.e.b ##22	ENSGT00950000183163.a.a.bb ##23	ENSGT00940000154096.b.b.b.b.a ##25	ENSGT00510000048364	ENSGT00390000004808.f ##27	ENSGT00940000177439	ENSGT00940000155107.a.a.b ##32	ENSGT00560000078630
Oryzias	ANCESTRAL SPECIES	23	ENSGT00390000011115	ENSGT00390000008551	ENSGT00940000163648.b	ENSGT00940000158729	ENSGT00390000012738	ENSGT00940000169005	ENSGT00390000010028	ENSGT00640000091536	ENSGT00950000182848.c.b.b.a	ENSGT00390000013601	ENSGT00940000157613	ENSGT00390000017955.c	ENSGT00940000156790	ENSGT00950000183028.a.b.b ##16	ENSGT00390000015257	ENSGT00950000182941.a.a.b.e.b ##22	ENSGT00950000183163.a.a.bb ##23	ENSGT00940000154096.b.b.b.b.a ##25	ENSGT00510000048364	ENSGT00390000004808.f ##27	ENSGT00940000177439.a	ENSGT00940000177439.b	ENSGT00940000155107.a.a.b ##32	ENSGT00560000078630	ENSGT00530000064067	ENSGT00940000156213.q.b	ENSGT00940000156213.q.a	ENSGT01090000260093.b.e	ENSGT01090000260093.b.f	ENSGT00950000182978.B	ENSGT00940000164496.a.a
Oryzias_a	ANCESTRAL SPECIES	18	ENSGT00390000011115	ENSGT00390000008551	ENSGT00940000163648.b	ENSGT00940000158729	ENSGT00390000012738	ENSGT00940000169005	ENSGT00390000010028	ENSGT00640000091536	ENSGT00950000182848.c.b.b.a	ENSGT00390000013601	ENSGT00940000157613	ENSGT00390000017955.c	ENSGT00940000156790	ENSGT00950000183028.a.b.b ##16	ENSGT00390000015257	ENSGT00950000182941.a.a.b.e.b ##22	ENSGT00950000183163.a.a.bb ##23	ENSGT00940000154096.b.b.b.b.a ##25	ENSGT00510000048364	ENSGT00390000004808.f ##27	ENSGT00390000010118.c.a.b	ENSGT00940000177439.b	ENSGT00940000155107.a.a.b ##32	ENSGT00560000078630	ENSGT00530000064067	ENSGT00940000156213.q.b	ENSGT00940000156213.q.a	ENSGT01090000260093.b.e	ENSGT01090000260093.b.f	ENSGT00950000182978.B	ENSGT00940000164496.a.a
Japanese Medaka HdrR	MODERN SPECIES	2	cdca8 (ENSORLG00000009938)	c19h1orf109 (ENSORLG00000009883)	ENSORLG00000009875	ago4 (ENSORLG00000009865)	CLSPN (ENSORLG00000009781)	ENSORLG00000027383	cdca5 (ENSORLG00000009754)	psmb2 (ENSORLG00000009748)	tfap2e (ENSORLG00000022744)	NCDN (ENSORLG00000009735)	KIAA0319L (ENSORLG00000009728)	cap1 (ENSORLG00000009709)	ppt1 (ENSORLG00000009676)	rragcb (ENSORLG00000009645) #13	meaf6 (ENSORLG00000021858)	map7d1b (ENSORLG00000009561) ##22	thrap3b (ENSORLG00000009543) ##23	eva1bb (ENSORLG00000009511) ##25	LSM10 (ENSORLG00000009504)	ENSORLG00000028326	oscp1a (ENSORLG00000009500) ##27	ENSORLG00000028537	ENSORLG00000027497	ENSORLG00000009473 ##32	smim13 (ENSORLG00000023911)	msto1 (ENSORLG00000009462)	ENSORLG00000009430	ENSORLG00000028783	xkr8.3 (ENSORLG00000009411)	ENSORLG00000009399	eya3 (ENSORLG00000009396)
Oryzias_b	ANCESTRAL SPECIES	27	ENSGT00390000008551	ENSGT00940000163648.b	ENSGT00940000158729	ENSGT00390000012738	ENSGT00940000169005	ENSGT00390000010028	ENSGT00640000091536	ENSGT00950000182848.c.b.b.a	ENSGT00390000013601	ENSGT00940000157613	ENSGT00390000017955.c	ENSGT00940000156790	ENSGT00950000183031.A.a.a #13	ENSGT00950000183028.a.b.b ##16	ENSGT00390000015257	ENSGT00950000182941.a.a.b.e.b ##22	ENSGT00950000183163.a.a.bb ##23	ENSGT00940000154096.b.b.b.b.a ##25	ENSGT00510000048364	ENSGT00390000004808.f ##27	ENSGT00940000177439.a	ENSGT00940000177439.b	ENSGT00940000155107.a.a.b ##32	ENSGT00560000078630	ENSGT00530000064067	ENSGT00940000156213.r	ENSGT01090000260093.b.e	ENSGT01090000260093.b.f	ENSGT00950000182978.B	ENSGT00940000164496.a.a	ENSGT00940000158053
Javanese ricefish	MODERN SPECIES	2	ENSOJAG00000014949	ENSOJAG00000015107	cdca8 (ENSOJAG00000015123)	c19h1orf109 (ENSOJAG00000015238)	ENSOJAG00000015245	EIF2C4 (ENSOJAG00000015300)	ENSOJAG00000017111	psmb2 (ENSOJAG00000017149)	tfap2e (ENSOJAG00000017207)	KIAA0319L (ENSOJAG00000017300)	cap1 (ENSOJAG00000018135)	ENSOJAG00000018375	rragcb (ENSOJAG00000018406) #13	fhl3b (ENSOJAG00000018420) ##16	meaf6 (ENSOJAG00000018430)	map7d1b (ENSOJAG00000018478) ##22	thrap3b (ENSOJAG00000018559) ##23	eva1bb (ENSOJAG00000018573) ##25	LSM10 (ENSOJAG00000018606)	oscp1a (ENSOJAG00000018623) ##27	ENSOJAG00000001622	ENSOJAG00000001634	zc3h12ab (ENSOJAG00000001643) ##32	smim13 (ENSOJAG00000001654)	msto1 (ENSOJAG00000001662)	srsf4 (ENSOJAG00000001676)	ENSOJAG00000001693	xkr8.3 (ENSOJAG00000001703)	ENSOJAG00000001723	eya3 (ENSOJAG00000001877)	si:ch211-195b13.1 (ENSOJAG00000002602)
Indian medaka	MODERN SPECIES	3	ENSOMEG00000006427	ago4 (ENSOMEG00000006399)	CLSPN (ENSOMEG00000006343)	ENSOMEG00000006270	cdca5 (ENSOMEG00000006255)	psmb2 (ENSOMEG00000006246)	ENSOMEG00000006212	tfap2e (ENSOMEG00000000143)	NCDN (ENSOMEG00000006095)	KIAA0319L (ENSOMEG00000006068)	cap1 (ENSOMEG00000006049)	ppt1 (ENSOMEG00000006005)	rragcb (ENSOMEG00000000957) #13	fhl3b (ENSOMEG00000005944) ##16	meaf6 (ENSOMEG00000005907)	map7d1b (ENSOMEG00000005865) ##22	thrap3b (ENSOMEG00000005716) ##23	eva1bb (ENSOMEG00000005691) ##25	ENSOMEG00000005680	oscp1a (ENSOMEG00000005663) ##27	ENSOMEG00000005633	ENSOMEG00000005619	ENSOMEG00000005607	zc3h12ab (ENSOMEG00000005602) ##32	smim13 (ENSOMEG00000000693)	msto1 (ENSOMEG00000005580)	srsf4 (ENSOMEG00000005541)	xkr8.3 (ENSOMEG00000005514)	ENSOMEG00000005502	eya3 (ENSOMEG00000005472)	si:ch211-195b13.1 (ENSOMEG00000022573)
Cyprinodontiformes	ANCESTRAL SPECIES	10	ENSGT00390000008551	ENSGT00940000163648.b	ENSGT00940000158729	ENSGT00390000012738	ENSGT00940000169005	ENSGT00390000010028	ENSGT00640000091536	ENSGT00950000182848.c.b.b.a	ENSGT00390000013601	ENSGT00940000157613	ENSGT00390000017955.c	ENSGT00940000156790	ENSGT00950000183028.a.b.b ##16	ENSGT00390000015257	ENSGT00390000011598	ENSGT00950000182941.a.a.b.e.b ##22	ENSGT00950000183163.a.a.bb ##23	ENSGT00940000154096.b.b.b.b.a ##25	ENSGT00510000048364	ENSGT00390000004808.f ##27	ENSGT00390000010118.c.a.b	ENSGT00940000155107.a.a.b ##32	ENSGT00560000078630	ENSGT00940000164496.a.a	ENSGT00950000182978.B	ENSGT01090000260093.b.f	ENSGT01090000260093.b.e	ENSGT00940000156213.r	ENSGT00940000156213.q.a	ENSGT00940000156213.q.b	ENSGT00530000064067
Aplocheiloidei	ANCESTRAL SPECIES	129	ENSGT00390000008551	ENSGT00940000163648.b	ENSGT00940000158729	ENSGT00390000012738	ENSGT00940000169005	ENSGT00390000010028	ENSGT00640000091536	ENSGT00950000182848.c.b.b.a	ENSGT00390000013601	ENSGT00940000157613	ENSGT00390000017955.c	ENSGT00940000156790	ENSGT00950000183028.a.b.b ##16	ENSGT00390000015257	ENSGT00390000011598	ENSGT00950000182941.a.a.b.e.b ##22	ENSGT00950000183163.a.a.bb ##23	ENSGT00940000154096.b.b.b.b.a ##25	ENSGT00510000048364	ENSGT00390000004808.f ##27
Turquoise killifish	MODERN SPECIES	411												cap1 (ENSNFUG00015020221)	ppt1 (ENSNFUG00015020397)	ENSNFUG00015020420	MEAF6 (ENSNFUG00015020423)	map7d1b (ENSNFUG00015020435) ##22	thrap3b (ENSNFUG00015020457) ##23
Cyprinodontoidei	ANCESTRAL SPECIES	60	ENSGT00940000166692	ENSGT00390000010887.b	ENSGT00940000163960.a	ENSGT00940000158729	ENSGT00390000012738	ENSGT00940000169005	ENSGT00390000010028	ENSGT00640000091536	ENSGT00950000182848.c.b.b.a	ENSGT00390000013601	ENSGT00940000157613	ENSGT00390000017955.c	ENSGT00940000156790	ENSGT00950000183028.a.b.b ##16	ENSGT00390000015257	ENSGT00950000182941.a.a.b.e.b ##22	ENSGT00950000183163.a.a.bb ##23	ENSGT00940000154096.b.b.b.b.a ##25	ENSGT00510000048364	ENSGT00390000004808.f ##27	ENSGT00390000010118.c.a.b	ENSGT00940000155107.a.a.b ##32	ENSGT00560000078630	ENSGT00940000164496.a.a	ENSGT00950000182978.B
NAME_4	ANCESTRAL SPECIES	178	ENSGT00940000166692	ENSGT00390000010887.b	ENSGT00940000163960.a	ENSGT00940000158729.n	ENSGT00390000012738	ENSGT00940000169005	ENSGT00390000010028	ENSGT00640000091536	ENSGT00950000182848.c.b.b.a	ENSGT00390000013601	ENSGT00940000157613	ENSGT00390000017955.c	ENSGT00940000156790	ENSGT00950000183028.a.b.b ##16	ENSGT00390000015257	ENSGT00950000182941.a.a.b.e.b ##22	ENSGT00950000183163.a.a.bb ##23	ENSGT00940000154096.b.b.b.b.a ##25	ENSGT00510000048364	ENSGT00390000004808.f ##27	ENSGT00390000010118.c.a.b	ENSGT00940000155107.a.a.b ##32	ENSGT00560000078630	ENSGT00940000164496.a.a	ENSGT00950000182978.B
Mummichog	MODERN SPECIES	1085															meaf6 (ENSFHEG00000001037)	map7d1b (ENSFHEG00000001044) ##22	thrap3b (ENSFHEG00000001051) ##23	ENSFHEG00000001054	LSM10 (ENSFHEG00000001058)	oscp1a (ENSFHEG00000001061) ##27	ENSFHEG00000001064
Poeciliinae	ANCESTRAL SPECIES	24	ENSGT00940000166692	ENSGT00390000010887.b	ENSGT00940000163960.a	ENSGT00940000158729	ENSGT00390000012738	ENSGT00940000169005	ENSGT00390000010028	ENSGT00640000091536	ENSGT00950000182848.c.b.b.a	ENSGT00390000013601	ENSGT00940000157613	ENSGT00390000017955.c	ENSGT00940000156790	ENSGT00950000183028.a.b.b ##16	ENSGT00390000015257	ENSGT00950000182941.a.a.b.e.b ##22	ENSGT00950000183163.a.a.bb ##23	ENSGT00940000154096.b.b.b.b.a ##25	ENSGT00510000048364	ENSGT00390000004808.f ##27	ENSGT00390000010118.c.a.b	ENSGT00950000182978.B	ENSGT00940000164496.a.a	ENSGT00560000078630	ENSGT00940000155107.a.a.b ##32	ENSGT01090000260093.b.f.o	ENSGT01090000260093.b.e	ENSGT00940000156213.r	ENSGT00940000156213.q.a	ENSGT00940000156213.q.b	ENSGT00530000064067
Platyfish	MODERN SPECIES	4	ENSXMAG00000016688	ENSXMAG00000027954	ago4 (ENSXMAG00000016657)	CLSPN (ENSXMAG00000016634)	ENSXMAG00000021351	cdca5 (ENSXMAG00000022429)	psmb2 (ENSXMAG00000016616)	tfap2e (ENSXMAG00000003446)	NCDN (ENSXMAG00000027698)	KIAA0319L (ENSXMAG00000003454)	cap1 (ENSXMAG00000028529)	ppt1 (ENSXMAG00000003488)	rragcb (ENSXMAG00000013223) #13	fhl3b (ENSXMAG00000003516) ##16	meaf6 (ENSXMAG00000003525)	map7d1b (ENSXMAG00000003534) ##22	thrap3b (ENSXMAG00000017962) ##23	eva1bb (ENSXMAG00000017970) ##25	LSM10 (ENSXMAG00000019963)	ENSXMAG00000004775 ##27	ENSXMAG00000028561 ##27	ENSXMAG00000028082	ENSXMAG00000017971	eya3 (ENSXMAG00000017972)	si:ch211-195b13.1 (ENSXMAG00000017993)	smim13 (ENSXMAG00000019893)	zc3h12ab (ENSXMAG00000025043) ##32	ENSXMAG00000029667	XKR8 (ENSXMAG00000021722)	xkr8.3 (ENSXMAG00000005543)	ENSXMAG00000021549
Poecilia	ANCESTRAL SPECIES	73	ENSGT00940000166692	ENSGT00390000010887.b	ENSGT00940000163960.a	ENSGT00940000158729	ENSGT00390000012738	ENSGT00940000169005	ENSGT00390000010028	ENSGT00640000091536	ENSGT00950000182848.c.b.b.a	ENSGT00390000013601	ENSGT00940000157613	ENSGT00390000017955.c	ENSGT00940000156790	ENSGT00950000183028.a.b.b ##16	ENSGT00390000015257	ENSGT00950000182941.a.a.b.e.b ##22	ENSGT00950000183163.a.a.bb ##23	ENSGT00940000154096.b.b.b.b.a ##25	ENSGT00510000048364	ENSGT00390000004808.f ##27	ENSGT00390000010118.c.a.b	ENSGT00940000170176	ENSGT00950000182978.B	ENSGT00940000164496.a.a	ENSGT00560000078630	ENSGT01090000260093.b.f.o	ENSGT01090000260093.b.e	ENSGT00940000156213.r	ENSGT00530000064067	ENSGT00530000063023.A.b	ENSGT00390000007597
NAME_6	ANCESTRAL SPECIES	199	ENSGT00940000166692	ENSGT00390000010887.b	ENSGT00940000163960.a	ENSGT00940000158729	ENSGT00390000012738	ENSGT00940000169005	ENSGT00390000010028	ENSGT00640000091536	ENSGT00950000182848.c.b.b.a	ENSGT00390000013601	ENSGT00940000157613	ENSGT00390000017955.c	ENSGT00940000156790	ENSGT00950000183028.a.b.b ##16	ENSGT00390000015257	ENSGT00950000182941.a.a.b.e.b ##22	ENSGT00950000183163.a.a.bb ##23	ENSGT00940000154096.b.b.b.b.a ##25	ENSGT00510000048364	ENSGT00390000004808.f ##27	ENSGT00390000010118.c.a.b	ENSGT00940000170176	ENSGT00950000182978.B	ENSGT00940000164496.a.a
Amazon molly	MODERN SPECIES	658	zgc:114119 (ENSPFOG00000002726)	ENSPFOG00000002334	ago4 (ENSPFOG00000001935)	CLSPN (ENSPFOG00000001788)	ENSPFOG00000024371	cdca5 (ENSPFOG00000001777)	psmb2 (ENSPFOG00000001718)	tfap2e (ENSPFOG00000001600)	NCDN (ENSPFOG00000001489)	KIAA0319L (ENSPFOG00000001224)	cap1 (ENSPFOG00000001012)	ppt1 (ENSPFOG00000000883)	rragcb (ENSPFOG00000000814) #13	fhl3b (ENSPFOG00000000748) ##16	meaf6 (ENSPFOG00000000680)	map7d1b (ENSPFOG00000000581) ##22	thrap3b (ENSPFOG00000000525) ##23	eva1bb (ENSPFOG00000000508) ##25	LSM10 (ENSPFOG00000020490)	oscp1a (ENSPFOG00000000446) ##27	ENSPFOG00000020489	ENSPFOG00000000423	eya3 (ENSPFOG00000000356)	si:ch211-195b13.1 (ENSPFOG00000000288)
Ovalentaria_B	ANCESTRAL SPECIES	15	ENSGT00390000008551	ENSGT00940000163648.b	ENSGT00940000158729	ENSGT00390000012738	ENSGT00940000169005	ENSGT00390000010028	ENSGT00640000091536	ENSGT00950000182848.c.b.b.a	ENSGT00390000013601	ENSGT00940000157613	ENSGT00390000017955.c	ENSGT00940000156790	ENSGT00950000183028.a.b.b ##16	ENSGT00390000015257	ENSGT00390000011598	ENSGT00950000182941.a.a.b.e.b ##22	ENSGT00950000183163.a.a.bb ##23	ENSGT00940000154096.b.b.b.b.a ##25	ENSGT00510000048364	ENSGT00390000004808.f ##27	ENSGT00390000010118.c.a.b	ENSGT00940000155107.a.a.b ##32	ENSGT00560000078630	ENSGT00950000183008.a.a.a.b	ENSGT00940000160424	ENSGT00940000158242	ENSGT00950000183053.D	ENSGT00390000008812.b.a	ENSGT00940000158053	ENSGT00940000164496.a.a	ENSGT00950000182978.B
Cichlidae	ANCESTRAL SPECIES	7	ENSGT00390000008551	ENSGT00940000163648.b	ENSGT00940000158729	ENSGT00390000012738	ENSGT00940000169005	ENSGT00390000010028	ENSGT00640000091536	ENSGT00950000182848.c.b.b.a	ENSGT00390000013601	ENSGT00940000157613	ENSGT00390000017955.c	ENSGT00940000156790	ENSGT00950000183028.a.b.b ##16	ENSGT00390000015257	ENSGT00390000011598	ENSGT00950000182941.a.a.b.e.b ##22	ENSGT00950000183163.a.a.bb ##23	ENSGT00940000154096.b.b.b.b.a ##25	ENSGT00510000048364	ENSGT00390000004808.f ##27	ENSGT00390000010118.c.a.b	ENSGT00940000155107.a.a.b ##32	ENSGT00560000078630	ENSGT00950000183008.a.a.a.b	ENSGT00940000160424	ENSGT00940000158242	ENSGT00950000183053.D	ENSGT00390000008812.b.a	ENSGT00940000158053	ENSGT00940000164496.a.a	ENSGT00950000182978.B
Pseudocrenilabrinae	ANCESTRAL SPECIES	12	ENSGT00390000008551	ENSGT00940000163648.b	ENSGT00940000158729	ENSGT00390000012738	ENSGT00940000169005	ENSGT00390000010028	ENSGT00640000091536	ENSGT00950000182848.c.b.b.a	ENSGT00390000013601	ENSGT00940000157613	ENSGT00390000017955.c	ENSGT00940000156790	ENSGT00950000183028.a.b.b ##16	ENSGT00390000015257	ENSGT00390000011598	ENSGT00950000182941.a.a.b.e.b ##22	ENSGT00950000183163.a.a.bb ##23	ENSGT00940000154096.b.b.b.b.a ##25	ENSGT00510000048364	ENSGT00390000004808.f ##27	ENSGT00390000010118.c.a.b.j	ENSGT00940000155107.a.a.b ##32	ENSGT00560000078630	ENSGT00950000183008.a.a.a.b	ENSGT00940000178420	ENSGT00940000160424	ENSGT00940000158242	ENSGT00950000183053.D	ENSGT00390000008812.b.a	ENSGT00940000158053	ENSGT00940000164496.a.a
Pseudocrenilabrinae_A	ANCESTRAL SPECIES	9	ENSGT00390000008551	ENSGT00940000163648.b	ENSGT00940000158729	ENSGT00390000012738	ENSGT00940000169005	ENSGT00390000010028	ENSGT00640000091536	ENSGT00950000182848.c.b.b.a	ENSGT00390000013601	ENSGT00940000157613	ENSGT00390000017955.c	ENSGT00940000156790	ENSGT00950000183028.a.b.b ##16	ENSGT00390000015257	ENSGT00390000011598	ENSGT00950000182941.a.a.b.e.b ##22	ENSGT00950000183163.a.a.bb ##23	ENSGT00940000154096.b.b.b.b.a ##25	ENSGT00510000048364	ENSGT00390000004808.f ##27	ENSGT00390000010118.c.a.b.j	ENSGT00940000155107.a.a.b ##32	ENSGT00560000078630	ENSGT00950000183008.a.a.a.b	ENSGT00940000178420	ENSGT00940000160424	ENSGT00940000158242	ENSGT00950000183053.D	ENSGT00390000008812.b.a	ENSGT00940000158053	ENSGT00940000164496.a.a
Haplochromini	ANCESTRAL SPECIES	5	ENSGT00390000008551	ENSGT00940000163648.b	ENSGT00940000158729	ENSGT00390000012738	ENSGT00940000169005	ENSGT00390000010028	ENSGT00640000091536	ENSGT00950000182848.c.b.b.a	ENSGT00390000013601	ENSGT00940000157613	ENSGT00390000017955.c	ENSGT00940000156790	ENSGT00950000183028.a.b.b ##16	ENSGT00390000015257	ENSGT00390000011598	ENSGT00950000182941.a.a.b.e.b ##22	ENSGT00950000183163.a.a.bb ##23	ENSGT00940000154096.b.b.b.b.a ##25	ENSGT00510000048364	ENSGT00390000004808.f ##27	ENSGT01100000263769.b	ENSGT01070000254348	ENSGT00940000155107.a.a.b ##32	ENSGT00560000078630	ENSGT00950000183008.a.a.a.b	ENSGT00940000178420	ENSGT00940000160424	ENSGT00940000158242	ENSGT00950000183053.D	ENSGT00390000008812.b.a	ENSGT00940000158053
Burton s mouthbrooder	MODERN SPECIES	524	c19h1orf109 (ENSHBUG00000001509)	ago4 (ENSHBUG00000001525)	CLSPN (ENSHBUG00000001542)	ENSHBUG00000001554	cdca5 (ENSHBUG00000001559)	psmb2 (ENSHBUG00000001568)	tfap2e (ENSHBUG00000001580)	NCDN (ENSHBUG00000001587)	KIAA0319L (ENSHBUG00000001599)	cap1 (ENSHBUG00000001615)	ppt1 (ENSHBUG00000001625)	rragcb (ENSHBUG00000001632) #13	fhl3b (ENSHBUG00000001636) ##16	meaf6 (ENSHBUG00000001648)	stpg1 (ENSHBUG00000001653)	map7d1b (ENSHBUG00000001680) ##22	thrap3b (ENSHBUG00000001708) ##23	eva1bb (ENSHBUG00000001719) ##25	LSM10 (ENSHBUG00000001722)	oscp1a (ENSHBUG00000001728) ##27	ENSHBUG00000001735	ENSHBUG00000001743
Haplochromini_A	ANCESTRAL SPECIES	5	ENSGT00390000008551	ENSGT00940000163648.b	ENSGT00940000158729	ENSGT00390000012738	ENSGT00940000169005	ENSGT00390000010028	ENSGT00640000091536	ENSGT00950000182848.c.b.b.a	ENSGT00390000013601	ENSGT00940000157613	ENSGT00390000017955.c	ENSGT00940000156790	ENSGT00950000183028.a.b.b ##16	ENSGT00390000015257	ENSGT00390000011598	ENSGT00950000182941.a.a.b.e.b ##22	ENSGT00950000183163.a.a.bb ##23	ENSGT00940000154096.b.b.b.b.a ##25	ENSGT00510000048364	ENSGT00390000004808.f ##27	ENSGT01100000263769.b	ENSGT01070000254348	ENSGT00940000155107.a.a.b ##32	ENSGT00560000078630	ENSGT00950000183008.a.a.a.b	ENSGT00940000178420	ENSGT00940000160424	ENSGT00940000158242	ENSGT00950000183053.D	ENSGT00390000008812.b.a	ENSGT00940000158053
P. nyererei	MODERN SPECIES	388	ENSPNYG00000002046	ago4 (ENSPNYG00000002089)	CLSPN (ENSPNYG00000002159)	ENSPNYG00000002405	cdca5 (ENSPNYG00000002457)	psmb2 (ENSPNYG00000002470)	tfap2e (ENSPNYG00000002494)	NCDN (ENSPNYG00000002533)	KIAA0319L (ENSPNYG00000002650)	cap1 (ENSPNYG00000002687)	ppt1 (ENSPNYG00000002732)	rragcb (ENSPNYG00000002775) #13	fhl3b (ENSPNYG00000002809) ##16	meaf6 (ENSPNYG00000002859)	stpg1 (ENSPNYG00000002988)	map7d1b (ENSPNYG00000003016) ##22	thrap3b (ENSPNYG00000003062) ##23	eva1bb (ENSPNYG00000003106) ##25	LSM10 (ENSPNYG00000003138)	oscp1a (ENSPNYG00000003173) ##27	ENSPNYG00000003238	ENSPNYG00000003253	ENSPNYG00000003267	ENSPNYG00000003289	zc3h12ab (ENSPNYG00000003297) ##32	smim13 (ENSPNYG00000003320)	nedd9 (ENSPNYG00000003335)	ENSPNYG00000003341	TMEM170B (ENSPNYG00000003350)	HIVEP1 (ENSPNYG00000003371)	edn1 (ENSPNYG00000003412)
Haplochromini_B	ANCESTRAL SPECIES	1	ENSGT00390000008551	ENSGT00940000163648.b	ENSGT00940000158729	ENSGT00390000012738	ENSGT00940000169005	ENSGT00390000010028	ENSGT00640000091536	ENSGT00950000182848.c.b.b.a	ENSGT00390000013601	ENSGT00940000157613	ENSGT00390000017955.c	ENSGT00940000156790	ENSGT00950000183028.a.b.b ##16	ENSGT00390000015257	ENSGT00390000011598	ENSGT00950000182941.a.a.b.e.b ##22	ENSGT00950000183163.a.a.bb ##23	ENSGT00940000154096.b.b.b.b.a ##25	ENSGT00510000048364	ENSGT00390000004808.f ##27	ENSGT00390000010118.c.a.b.j	ENSGT01090000260364.b.b.a	ENSGT00390000010118.c.a.b.i.a	ENSGT01060000249788.a	ENSGT01070000254348.a	ENSGT01070000254348.b	ENSGT00940000155107.a.a.b ##32	ENSGT00560000078630	ENSGT00940000178420	ENSGT00950000183008.a.a.a.b	ENSGT00940000160424
Eastern happy	MODERN SPECIES	13	ENSACLG00000005287	ago4 (ENSACLG00000005181)	CLSPN (ENSACLG00000005132)	ENSACLG00000005127	ENSACLG00000005115	psmb2 (ENSACLG00000005086)	tfap2e (ENSACLG00000005058)	NCDN (ENSACLG00000005026)	KIAA0319L (ENSACLG00000004999)	cap1 (ENSACLG00000004977)	ppt1 (ENSACLG00000004957)	rragcb (ENSACLG00000004938) #13	fhl3b (ENSACLG00000004926) ##16	meaf6 (ENSACLG00000004907)	stpg1 (ENSACLG00000004902)	map7d1b (ENSACLG00000004864) ##22	thrap3b (ENSACLG00000004763) ##23	eva1bb (ENSACLG00000004750) ##25	LSM10 (ENSACLG00000004728)	oscp1a (ENSACLG00000004687) ##27	ENSACLG00000004680	ENSACLG00000004674	ENSACLG00000004658	ENSACLG00000004641	ENSACLG00000004617	ENSACLG00000004607	ENSACLG00000004542	ENSACLG00000004517	ENSACLG00000004502	zc3h12ab (ENSACLG00000004488) ##32	smim13 (ENSACLG00000004481)
Zebra mbuna	MODERN SPECIES	1104	ENSMZEG00005026347	ago4 (ENSMZEG00005026346)	CLSPN (ENSMZEG00005026344)	ENSMZEG00005026343	ENSMZEG00005026340	psmb2 (ENSMZEG00005026338)	tfap2e (ENSMZEG00005026336)	NCDN (ENSMZEG00005026335)	KIAA0319L (ENSMZEG00005026332)	cap1 (ENSMZEG00005026329)	ppt1 (ENSMZEG00005026327)	rragcb (ENSMZEG00005026324) #13	fhl3b (ENSMZEG00005026323) ##16	meaf6 (ENSMZEG00005026320)	stpg1 (ENSMZEG00005026316)	map7d1b (ENSMZEG00005026312) ##22	thrap3b (ENSMZEG00005026309) ##23	eva1bb (ENSMZEG00005026308) ##25	LSM10 (ENSMZEG00005026307)	oscp1a (ENSMZEG00005026304) ##27	ENSMZEG00005026303	ENSMZEG00005026301	ENSMZEG00005026299	ENSMZEG00005026298	ENSMZEG00005026296	ENSMZEG00005026294	ENSMZEG00005026293	ENSMZEG00005026291	ENSMZEG00005026289	zc3h12ab (ENSMZEG00005026287) ##32	smim13 (ENSMZEG00005026286)
Lyretail cichlid	MODERN SPECIES	322	ENSNBRG00000013473	ago4 (ENSNBRG00000013492)	CLSPN (ENSNBRG00000013539)	ENSNBRG00000013713	ENSNBRG00000013760	psmb2 (ENSNBRG00000013797)	tfap2e (ENSNBRG00000013819)	ENSNBRG00000013858	ENSNBRG00000013921	cap1 (ENSNBRG00000013979)	ppt1 (ENSNBRG00000014017)	rragcb (ENSNBRG00000014036) #13	fhl3b (ENSNBRG00000014055) ##16	meaf6 (ENSNBRG00000014080)	stpg1 (ENSNBRG00000014134)	map7d1b (ENSNBRG00000014183) ##22	thrap3b (ENSNBRG00000014237) ##23	eva1bb (ENSNBRG00000014294) ##25	LSM10 (ENSNBRG00000014306)	oscp1a (ENSNBRG00000014319) ##27	ENSNBRG00000014359	zc3h12ab (ENSNBRG00000014376) ##32	smim13 (ENSNBRG00000014425)	nedd9 (ENSNBRG00000014432)	ENSNBRG00000014486	TMEM170B (ENSNBRG00000014493)	HIVEP1 (ENSNBRG00000014508)	edn1 (ENSNBRG00000014550)	si:dkeyp-92c9.2 (ENSNBRG00000014568)	myo1g (ENSNBRG00000014579)	si:ch211-195b13.1 (ENSNBRG00000014644)
Nile tilapia	MODERN SPECIES	13	ENSONIG00000020903	ago4 (ENSONIG00000013603)	CLSPN (ENSONIG00000013618)	ENSONIG00000032443	cdca5 (ENSONIG00000013627)	psmb2 (ENSONIG00000013628)	tfap2e (ENSONIG00000013632)	NCDN (ENSONIG00000013638)	KIAA0319L (ENSONIG00000013646)	cap1 (ENSONIG00000013650)	ppt1 (ENSONIG00000013654)	rragcb (ENSONIG00000013658) #13	fhl3b (ENSONIG00000016304) ##16	meaf6 (ENSONIG00000013665)	stpg1 (ENSONIG00000013668)	map7d1b (ENSONIG00000013670) ##22	thrap3b (ENSONIG00000013673) ##23	eva1bb (ENSONIG00000013681) ##25	LSM10 (ENSONIG00000020904)	oscp1a (ENSONIG00000013682) ##27	ENSONIG00000032030	ENSONIG00000039124	ENSONIG00000013684	ENSONIG00000028012	ENSONIG00000032847	ENSONIG00000035261	zc3h12ab (ENSONIG00000013685) ##32	smim13 (ENSONIG00000042839)	nedd9 (ENSONIG00000013688)	ENSONIG00000027700	tmem170b (ENSONIG00000027709)
Midas cichlid	MODERN SPECIES	1145	ago4 (ENSACIG00000014548)	ENSACIG00000014590	CLSPN (ENSACIG00000014619)	ENSACIG00000014975	cdca5 (ENSACIG00000014987)	psmb2 (ENSACIG00000014995)	tfap2e (ENSACIG00000015015)	ENSACIG00000015036	KIAA0319L (ENSACIG00000015054)	cap1 (ENSACIG00000015108)	ppt1 (ENSACIG00000015133)	rragcb (ENSACIG00000015168) #13	fhl3b (ENSACIG00000015186) ##16	meaf6 (ENSACIG00000015202)	stpg1 (ENSACIG00000015255)	map7d1b (ENSACIG00000015299) ##22	thrap3b (ENSACIG00000015331) ##23	eva1bb (ENSACIG00000015385) ##25	LSM10 (ENSACIG00000015420)	oscp1a (ENSACIG00000015426) ##27	ENSACIG00000015456	ENSACIG00000015467	ENSACIG00000015475
Pomacentridae	ANCESTRAL SPECIES	95	ENSGT00390000008551	ENSGT00940000163648.b	ENSGT00940000158729.o	ENSGT00390000012738	ENSGT00940000169005	ENSGT00390000010028	ENSGT00640000091536.u	ENSGT00950000182848.c.b.b.a	ENSGT00390000013601	ENSGT00940000157613	ENSGT00390000017955.c	ENSGT00940000156790	ENSGT00950000183028.a.b.b ##16	ENSGT00390000015257	ENSGT00390000011598	ENSGT00950000182941.a.a.b.e.b ##22	ENSGT00950000183163.a.a.bb ##23	ENSGT00940000154096.b.b.b.b.a ##25	ENSGT00510000048364	ENSGT00390000004808.f ##27	ENSGT00390000010118.c.a.b	ENSGT00940000155107.a.a.b ##32	ENSGT00560000078630	ENSGT00950000183008.a.a.a.b	ENSGT00940000160424	ENSGT00940000158242	ENSGT00950000183053.D	ENSGT00390000008812.b.a	ENSGT00940000158053	ENSGT00940000164496.a.a	ENSGT00950000182978.B
Pomacentridae_A	ANCESTRAL SPECIES																	ENSGT00950000182941.a.a.b.e.b ##22
Spiny chromis	MODERN SPECIES	328																map7d1b (ENSAPOG00000002841) ##22	ncln (ENSAPOG00000002896)	s1pr4 (ENSAPOG00000002927)	MYO9B (ENSAPOG00000003038)	use1 (ENSAPOG00000003076)	ENSAPOG00000003094	insrb (ENSAPOG00000003154)	ARHGEF18 (ENSAPOG00000003252)
Amphiprion	ANCESTRAL SPECIES																	ENSGT00950000182941.a.a.b.e.b ##22
Clown anemonefish	MODERN SPECIES	3609																map7d1b (ENSAOCG00000002968) ##22	mitd1 (ENSAOCG00000002973)	mrpl30 (ENSAOCG00000002976)	txndc9 (ENSAOCG00000002981)
Bicolor damselfish	DUPLICATION
Bicolor damselfish	MODERN SPECIES	1878												ppt1 (ENSSPAG00000014289)	rragcb (ENSSPAG00000014315) #13	fhl3b (ENSSPAG00000014341) ##16	meaf6 (ENSSPAG00000014360)	map7d1b (ENSSPAG00000014371) ##22	ENSSPAG00000014399	ENSSPAG00000014411 ##22
Bicolor damselfish	MODERN SPECIES	1878										ppt1 (ENSSPAG00000014289)	rragcb (ENSSPAG00000014315) #13	fhl3b (ENSSPAG00000014341) ##16	meaf6 (ENSSPAG00000014360)	map7d1b (ENSSPAG00000014371) ##22	ENSSPAG00000014399	ENSSPAG00000014411 ##22
Percomorphaceae_C	ANCESTRAL SPECIES	15	ENSGT00390000008551	ENSGT00940000163648.b	ENSGT00940000158729	ENSGT00390000012738	ENSGT00940000169005	ENSGT00390000010028	ENSGT00640000091536	ENSGT00950000182848.c.b.b.a	ENSGT00390000013601	ENSGT00940000157613	ENSGT00390000017955.c	ENSGT00940000156790	ENSGT00950000183028.a.b.b ##16	ENSGT00390000015257	ENSGT00390000011598	ENSGT00950000182941.a.a.b.e.b ##22	ENSGT00950000183163.a.a.bb ##23	ENSGT00940000154096.b.b.b.b.a ##25	ENSGT00510000048364	ENSGT00390000004808.f ##27	ENSGT00390000010118.c.a.b	ENSGT00940000155107.a.a.b ##32	ENSGT00560000078630	ENSGT00950000183008.a.a.a.b	ENSGT00940000160424	ENSGT00940000158242	ENSGT00950000183053.D	ENSGT00390000008812.b.a	ENSGT00940000158053	ENSGT00940000164496.a.a	ENSGT00950000182978.B
Percomorphaceae_D	ANCESTRAL SPECIES	14	ENSGT00390000008551	ENSGT00940000163648.b	ENSGT00940000158729	ENSGT00390000012738	ENSGT00940000169005	ENSGT00390000010028	ENSGT00640000091536	ENSGT00950000182848.c.b.b.a	ENSGT00390000013601	ENSGT00940000157613	ENSGT00390000017955.c	ENSGT00940000156790	ENSGT00950000183028.a.b.b ##16	ENSGT00390000015257	ENSGT00390000011598	ENSGT00950000182941.a.a.b.e.b ##22	ENSGT00950000183163.a.a.bb ##23	ENSGT00940000154096.b.b.b.b.a ##25	ENSGT00510000048364	ENSGT00390000004808.f ##27	ENSGT00390000010118.c.a.b	ENSGT00940000155107.a.a.b ##32	ENSGT00560000078630	ENSGT00950000183008.a.a.a.b	ENSGT00940000160424	ENSGT00940000158242	ENSGT00950000183053.D	ENSGT00390000008812.b.a	ENSGT00940000158053	ENSGT00940000164496.a.a	ENSGT00950000182978.B
Carangaria	ANCESTRAL SPECIES	14	ENSGT00390000008551	ENSGT00940000163648.b	ENSGT00940000158729	ENSGT00390000012738	ENSGT00940000169005	ENSGT00390000010028	ENSGT00640000091536	ENSGT00950000182848.c.b.b.a	ENSGT00390000013601	ENSGT00940000157613	ENSGT00390000017955.c	ENSGT00940000156790	ENSGT00950000183028.a.b.b ##16	ENSGT00390000015257	ENSGT00390000011598	ENSGT00950000182941.a.a.b.e.b ##22	ENSGT00950000183163.a.a.bb ##23	ENSGT00940000154096.b.b.b.b.a ##25	ENSGT00510000048364	ENSGT00390000004808.f ##27	ENSGT00390000010118.c.a.b	ENSGT00940000155107.a.a.b ##32	ENSGT00560000078630	ENSGT00950000183008.a.a.a.b	ENSGT00940000160424	ENSGT00940000158242	ENSGT00950000183053.D	ENSGT00390000008812.b.a	ENSGT00940000158053	ENSGT00940000164496.a.a	ENSGT00950000182978.B
Carangaria_A	ANCESTRAL SPECIES	16	ENSGT00390000008551	ENSGT00940000163648.b	ENSGT00940000158729	ENSGT00390000012738	ENSGT00940000169005	ENSGT00390000010028	ENSGT00640000091536	ENSGT00950000182848.c.b.b.a	ENSGT00390000013601	ENSGT00940000157613	ENSGT00390000017955.c	ENSGT00940000156790	ENSGT00950000183028.a.b.b ##16	ENSGT00390000015257	ENSGT00390000011598	ENSGT00950000182941.a.a.b.e.b ##22	ENSGT00950000183163.a.a.bb ##23	ENSGT00940000154096.b.b.b.b.a ##25	ENSGT00510000048364	ENSGT00390000004808.f ##27	ENSGT00390000010118.c.a.b	ENSGT00940000155107.a.a.b ##32	ENSGT00560000078630	ENSGT00950000183008.a.a.a.b	ENSGT00940000160424	ENSGT00940000158242	ENSGT00950000183053.D	ENSGT00390000008812.b.a	ENSGT00940000158053	ENSGT00940000164496.a.a	ENSGT00950000182978.B
Barramundi perch	MODERN SPECIES	14	LOXL4 (ENSLCAG00010004189)	zgc:123010 (ENSLCAG00010004184)	pyroxd2 (ENSLCAG00010004145)	slc25a28 (ENSLCAG00010004135)	nkx3.3 (ENSLCAG00010004133)	nkx2.3 (ENSLCAG00010004130)	got1 (ENSLCAG00010004125)	CNNM1 (ENSLCAG00010004120)	HPSE2 (ENSLCAG00010004113)	hps1 (ENSLCAG00010004110)	st3gal7 (ENSLCAG00010004103)	ENSLCAG00010004098	morn4 (ENSLCAG00010004090)	ENSLCAG00010004086	ENSLCAG00010004083	map7d1b (ENSLCAG00010004081) ##22	ENSLCAG00010004074	LSM10 (ENSLCAG00010004071)	oscp1a (ENSLCAG00010004068) ##27	ENSLCAG00010004066	zc3h12ab (ENSLCAG00010004058) ##32	smim13 (ENSLCAG00010004056)
Seriola	ANCESTRAL SPECIES	42														ENSGT00390000015257	ENSGT00390000011598	ENSGT00950000182941.a.a.b.e.b ##22	ENSGT00950000183163.a.a.bb ##23	ENSGT00940000154096.b.b.b.b.a ##25	ENSGT00510000048364	ENSGT00390000004808.f ##27	ENSGT00390000010118.c.a.b	ENSGT00940000155107.a.a.b ##32	ENSGT00560000078630	ENSGT00950000183008.a.a.a.b	ENSGT00940000160424	ENSGT00940000158242	ENSGT00950000183053.D	ENSGT00390000008812.b.a	ENSGT00940000158053	ENSGT00940000164496.a.a	ENSGT00950000182978.B
Greater amberjack	MODERN SPECIES	94														meaf6 (ENSSDUG00000006968)	stpg1 (ENSSDUG00000006981)	map7d1b (ENSSDUG00000007025) ##22	thrap3b (ENSSDUG00000007054) ##23	eva1bb (ENSSDUG00000007086) ##25	LSM10 (ENSSDUG00000007090)	oscp1a (ENSSDUG00000007103) ##27	ENSSDUG00000007130	ENSSDUG00000007152	zc3h12ab (ENSSDUG00000007162) ##32	smim13 (ENSSDUG00000007168)	nedd9 (ENSSDUG00000007176)	TMEM170B (ENSSDUG00000007203)	HIVEP1 (ENSSDUG00000007210)	edn1 (ENSSDUG00000007218)	si:dkeyp-92c9.2 (ENSSDUG00000007223)	myo1g (ENSSDUG00000007234)	si:ch211-195b13.1 (ENSSDUG00000007289)
Yellowtail amberjack	MODERN SPECIES	2850													ENSSLDG00000009021	meaf6 (ENSSLDG00000009035)	stpg1 (ENSSLDG00000009059)	map7d1b (ENSSLDG00000009085) ##22	ENSSLDG00000009184	thrap3b (ENSSLDG00000009210) ##23	eva1bb (ENSSLDG00000009233) ##25	oscp1a (ENSSLDG00000009259) ##27	ENSSLDG00000009301	zc3h12ab (ENSSLDG00000009317) ##32	smim13 (ENSSLDG00000009331)	nedd9 (ENSSLDG00000009345)	TMEM170B (ENSSLDG00000009358)	HIVEP1 (ENSSLDG00000009376)
Pleuronectoidei	ANCESTRAL SPECIES	33	ENSGT00940000163648.b	ENSGT00940000158729	ENSGT00390000012738	ENSGT00940000169005	ENSGT00390000010028	ENSGT00640000091536	ENSGT00950000182848.c.b.b.a	ENSGT00390000013601	ENSGT00940000157613	ENSGT00390000017955.c	ENSGT00940000156790	ENSGT00950000183031.A.a.a #13	ENSGT00950000183028.a.b.b ##16	ENSGT00390000015257	ENSGT00390000011598	ENSGT00950000182941.a.a.b.e.b ##22	ENSGT00950000183163.a.a.bb ##23	ENSGT00940000154096.b.b.b.b.a ##25	ENSGT00510000048364	ENSGT00390000004808.f ##27	ENSGT00940000177439	ENSGT00940000155107.a.a.b ##32	ENSGT00560000078630	ENSGT00950000183008.a.a.a.b	ENSGT00940000160424	ENSGT00940000158242	ENSGT00950000183053.D	ENSGT00390000008812.b.a	ENSGT00940000158053	ENSGT00940000164496.a.a	ENSGT00950000182978.B
Tongue sole	MODERN SPECIES	9	ENSCSEG00000010728	ago4 (ENSCSEG00000010696)	CLSPN (ENSCSEG00000010681)	ENSCSEG00000010661	cdca5 (ENSCSEG00000010655)	psmb2 (ENSCSEG00000010643)	tfap2e (ENSCSEG00000010632)	NCDN (ENSCSEG00000010623)	ENSCSEG00000010571	cap1 (ENSCSEG00000010543)	ppt1 (ENSCSEG00000010527)	rragcb (ENSCSEG00000010508) #13	fhl3b (ENSCSEG00000010500) ##16	meaf6 (ENSCSEG00000010482)	stpg1 (ENSCSEG00000010471)	map7d1b (ENSCSEG00000010416) ##22	thrap3b (ENSCSEG00000010392) ##23	eva1bb (ENSCSEG00000010382) ##25	LSM10 (ENSCSEG00000010374)	oscp1a (ENSCSEG00000010362) ##27	zc3h12ab (ENSCSEG00000010348) ##32	smim13 (ENSCSEG00000010342)	nedd9 (ENSCSEG00000010325)	TMEM170B (ENSCSEG00000010318)	HIVEP1 (ENSCSEG00000010301)	edn1 (ENSCSEG00000010290)	si:dkeyp-92c9.2 (ENSCSEG00000010283)	myo1g (ENSCSEG00000010242)	si:ch211-195b13.1 (ENSCSEG00000010202)	eya3 (ENSCSEG00000010177)	ENSCSEG00000010138
Turbot	MODERN SPECIES	14	ENSSMAG00000000763	ENSSMAG00000000785	ago4 (ENSSMAG00000000808)	CLSPN (ENSSMAG00000000941)	ENSSMAG00000000955	ENSSMAG00000037330	TFAP2E (ENSSMAG00000000991)	NCDN (ENSSMAG00000001017)	KIAA0319L (ENSSMAG00000001024)	ENSSMAG00000001063	ppt1 (ENSSMAG00000001080)	rragcb (ENSSMAG00000001115) #13	fhl3b (ENSSMAG00000001140) ##16	meaf6 (ENSSMAG00000001163)	stpg1 (ENSSMAG00000035705)	map7d1b (ENSSMAG00000001191) ##22	thrap3b (ENSSMAG00000001259) ##23	eva1bb (ENSSMAG00000001280) ##25	LSM10 (ENSSMAG00000001297)	oscp1a (ENSSMAG00000001314) ##27	ENSSMAG00000021680	zc3h12ab (ENSSMAG00000001367) ##32	smim13 (ENSSMAG00000030110)	nedd9 (ENSSMAG00000001395)	TMEM170B (ENSSMAG00000030357)	HIVEP1 (ENSSMAG00000001439)	edn1 (ENSSMAG00000001461)	si:dkeyp-92c9.2 (ENSSMAG00000001471)	myo1g (ENSSMAG00000001483)	si:ch211-195b13.1 (ENSSMAG00000001608)	eya3 (ENSSMAG00000001662)
Anabantaria	ANCESTRAL SPECIES	16	ENSGT00940000163648.b	ENSGT00940000158729	ENSGT00390000012738	ENSGT00940000169005	ENSGT00390000010028	ENSGT00640000091536	ENSGT00950000182848.c.b.b.a	ENSGT00390000013601	ENSGT00940000157613	ENSGT00390000017955.c	ENSGT00940000156790	ENSGT00950000183031.A.a.a #13	ENSGT00950000183028.a.b.b ##16	ENSGT00390000015257	ENSGT00390000011598	ENSGT00950000182941.a.a.b.e.b ##22	ENSGT00950000183163.a.a.bb ##23	ENSGT00940000154096.b.b.b.b.a ##25	ENSGT00510000048364	ENSGT00390000004808.f ##27	ENSGT00390000010118.c.a.b	ENSGT00940000155107.a.a.b ##32	ENSGT00560000078630	ENSGT00950000183008.a.a.a.b	ENSGT00940000160424	ENSGT00940000158242	ENSGT00950000183053.D	ENSGT00390000008812.b.a	ENSGT00940000158053	ENSGT00940000164496.a.a	ENSGT00950000182978.B
Zig-zag eel	MODERN SPECIES	2	ENSMAMG00000003839	ago4 (ENSMAMG00000003874)	CLSPN (ENSMAMG00000003927)	ENSMAMG00000003980	ENSMAMG00000003988	psmb2 (ENSMAMG00000003992)	TFAP2E (ENSMAMG00000004022)	NCDN (ENSMAMG00000004058)	KIAA0319L (ENSMAMG00000004065)	ENSMAMG00000004094	ppt1 (ENSMAMG00000004148)	rragcb (ENSMAMG00000004171) #13	fhl3b (ENSMAMG00000004199) ##16	meaf6 (ENSMAMG00000004214)	stpg1 (ENSMAMG00000004237)	map7d1b (ENSMAMG00000004292) ##22	thrap3b (ENSMAMG00000004348) ##23	eva1bb (ENSMAMG00000025345) ##25	ENSMAMG00000028468	oscp1a (ENSMAMG00000004443) ##27	ENSMAMG00000027271	ENSMAMG00000004529	zc3h12ab (ENSMAMG00000004483) ##32	smim13 (ENSMAMG00000028528)	nedd9 (ENSMAMG00000004548)	TMEM170B (ENSMAMG00000024794)	HIVEP1 (ENSMAMG00000004590)	edn1 (ENSMAMG00000004638)	si:dkeyp-92c9.2 (ENSMAMG00000027420)	myo1g (ENSMAMG00000004681)	si:ch211-195b13.1 (ENSMAMG00000004750)
Anabantoidei	ANCESTRAL SPECIES	19	ENSGT00390000008551	ENSGT00940000163648.b	ENSGT00940000158729	ENSGT00390000012738	ENSGT00940000169005	ENSGT00390000010028	ENSGT00640000091536	ENSGT00950000182848.c.b.b.a	ENSGT00390000013601	ENSGT00940000157613	ENSGT00390000017955.c	ENSGT00940000156790	ENSGT00950000183028.a.b.b ##16	ENSGT00390000015257	ENSGT00390000011598	ENSGT00950000182941.a.a.b.e.b ##22	ENSGT00950000183163.a.a.bb ##23	ENSGT00940000154096.b.b.b.b.a ##25	ENSGT00510000048364	ENSGT00390000004808.f ##27	ENSGT00390000010118.c.a.b	ENSGT00940000155107.a.a.b ##32	ENSGT00560000078630	ENSGT00950000183008.a.a.a.b	ENSGT00940000160424	ENSGT00940000158242	ENSGT00950000183053.D	ENSGT00390000008812.b.a	ENSGT00940000158053	ENSGT00940000164496.a.a	ENSGT00950000182978.B
Siamese fighting fish	MODERN SPECIES	2	ENSBSLG00000019513	ago4 (ENSBSLG00000019879)	CLSPN (ENSBSLG00000020294)	ENSBSLG00000020312	cdca5 (ENSBSLG00000020313)	psmb2 (ENSBSLG00000020317)	tfap2e (ENSBSLG00000020341)	NCDN (ENSBSLG00000020347)	KIAA0319L (ENSBSLG00000021191)	cap1 (ENSBSLG00000021643)	ppt1 (ENSBSLG00000021676)	rragcb (ENSBSLG00000021829) #13	fhl3b (ENSBSLG00000021855) ##16	meaf6 (ENSBSLG00000021881)	stpg1 (ENSBSLG00000021909)	map7d1b (ENSBSLG00000021935) ##22	thrap3b (ENSBSLG00000021994) ##23	eva1bb (ENSBSLG00000022015) ##25	LSM10 (ENSBSLG00000022026)	oscp1a (ENSBSLG00000022029) ##27	ENSBSLG00000022042	ENSBSLG00000022051 ##32	smim13 (ENSBSLG00000022059)	nedd9 (ENSBSLG00000022070)	TMEM170B (ENSBSLG00000022084)	HIVEP1 (ENSBSLG00000022092)	edn1 (ENSBSLG00000022107)	si:dkeyp-92c9.2 (ENSBSLG00000022111)	myo1g (ENSBSLG00000022131)	si:ch211-195b13.1 (ENSBSLG00000022497)	eya3 (ENSBSLG00000023364)
Climbing perch	MODERN SPECIES	2	ENSATEG00000006755	ago4 (ENSATEG00000006717)	CLSPN (ENSATEG00000006697)	ENSATEG00000006685	ENSATEG00000006679	psmb2 (ENSATEG00000006643)	TFAP2E (ENSATEG00000006627)	NCDN (ENSATEG00000006619)	KIAA0319L (ENSATEG00000006607)	ENSATEG00000006592	ppt1 (ENSATEG00000028900)	rragcb (ENSATEG00000006525) #13	fhl3b (ENSATEG00000006513) ##16	meaf6 (ENSATEG00000006466)	stpg1 (ENSATEG00000006457)	map7d1b (ENSATEG00000006432) ##22	thrap3b (ENSATEG00000006350) ##23	eva1bb (ENSATEG00000006328) ##25	LSM10 (ENSATEG00000006310)	oscp1a (ENSATEG00000006263) ##27	ENSATEG00000006247	zc3h12ab (ENSATEG00000006140) ##32	smim13 (ENSATEG00000006130)	nedd9 (ENSATEG00000006076)	TMEM170B (ENSATEG00000028130)	HIVEP1 (ENSATEG00000005949)	edn1 (ENSATEG00000026028)	si:dkeyp-92c9.2 (ENSATEG00000005914)	myo1g (ENSATEG00000005817)	si:ch211-195b13.1 (ENSATEG00000028776)	eya3 (ENSATEG00000005730)
Eupercaria	ANCESTRAL SPECIES	11	ENSGT00390000008551	ENSGT00940000163648.b	ENSGT00940000158729	ENSGT00390000012738	ENSGT00940000169005	ENSGT00390000010028	ENSGT00640000091536	ENSGT00950000182848.c.b.b.a	ENSGT00390000013601	ENSGT00940000157613	ENSGT00390000017955.c	ENSGT00940000156790	ENSGT00950000183028.a.b.b ##16	ENSGT00390000015257	ENSGT00390000011598	ENSGT00950000182941.a.a.b.e.b ##22	ENSGT00950000183163.a.a.bb ##23	ENSGT00940000154096.b.b.b.b.a ##25	ENSGT00510000048364	ENSGT00390000004808.f ##27	ENSGT00390000010118.c.a.b	ENSGT00940000155107.a.a.b ##32	ENSGT00560000078630	ENSGT00950000183008.a.a.a.b	ENSGT00940000160424	ENSGT00940000158242	ENSGT00950000183053.D	ENSGT00390000008812.b.a	ENSGT00940000158053	ENSGT00940000164496.a.a	ENSGT00950000182978.B
Tetraodontidae	ANCESTRAL SPECIES	43	ENSGT00390000011115	ENSGT00390000008551	ENSGT00940000163648.b	ENSGT00940000158729	ENSGT00390000012738	ENSGT00940000169005	ENSGT00390000010028	ENSGT00640000091536	ENSGT00950000182848.c.b.b.a	ENSGT00390000013601	ENSGT00940000157613	ENSGT00390000017955.c	ENSGT00940000156790	ENSGT00950000183028.a.b.b ##16	ENSGT00390000015257	ENSGT00950000182941.a.a.b.e.b ##22	ENSGT00950000183163.a.a.bb ##23	ENSGT00940000154096.b.b.b.b.a ##25	ENSGT00510000048364	ENSGT00390000010118.c.a.b	ENSGT00940000155107.a.a.b ##32	ENSGT00560000078630	ENSGT00950000183008.a.a.a.b.e	ENSGT00940000160424	ENSGT00940000158242	ENSGT00950000183053.D	ENSGT00390000008812.b.a	ENSGT00940000158053	ENSGT00940000164496.a.a	ENSGT00950000182978.B	ENSGT01090000260093.b.f
Fugu	MODERN SPECIES	3	C1orf109 (ENSTRUG00000024339)	ENSTRUG00000007934	ago4 (ENSTRUG00000008052)	CLSPN (ENSTRUG00000008616)	ENSTRUG00000019824	cdca5 (ENSTRUG00000008868)	psmb2 (ENSTRUG00000008871)	tfap2e (ENSTRUG00000008956)	NCDN (ENSTRUG00000009054)	KIAA0319L (ENSTRUG00000009252)	cap1 (ENSTRUG00000009345)	ppt1 (ENSTRUG00000009602)	rragcb (ENSTRUG00000009884) #13	fhl3b (ENSTRUG00000010010) ##16	meaf6 (ENSTRUG00000010159)	map7d1b (ENSTRUG00000010226) ##22	thrap3b (ENSTRUG00000010336) ##23	eva1bb (ENSTRUG00000010516) ##25	LSM10 (ENSTRUG00000010531)	ENSTRUG00000025207	ENSTRUG00000010565 ##32	smim13 (ENSTRUG00000020110)	smim13 (ENSTRUG00000025620)	nedd9 (ENSTRUG00000010644)	TMEM170B (ENSTRUG00000024077)	HIVEP1 (ENSTRUG00000010871)	edn1 (ENSTRUG00000024552)	si:dkeyp-92c9.2 (ENSTRUG00000011007)	myo1g (ENSTRUG00000011023)	si:ch211-195b13.1 (ENSTRUG00000011468)	eya3 (ENSTRUG00000011700)
Tetraodon	MODERN SPECIES	16	ENSTNIG00000017737	ENSTNIG00000017736	cdca8 (ENSTNIG00000001048)	ENSTNIG00000006333	ENSTNIG00000006332	ago4 (ENSTNIG00000006331)	CLSPN (ENSTNIG00000006330)	ENSTNIG00000004591	NCDN (ENSTNIG00000004590)	KIAA0319L (ENSTNIG00000004589)	cap1 (ENSTNIG00000004588)	ppt1 (ENSTNIG00000004587)	rragcb (ENSTNIG00000004586) #13	fhl3b (ENSTNIG00000004585) ##16	meaf6 (ENSTNIG00000004584)	map7d1b (ENSTNIG00000004583) ##22	thrap3b (ENSTNIG00000004582) ##23	eva1bb (ENSTNIG00000004581) ##25	oscp1a (ENSTNIG00000019817) ##27	zc3h12ab (ENSTNIG00000001274) ##32	msto1 (ENSTNIG00000005572)	srsf4 (ENSTNIG00000005573)	xkr8.3 (ENSTNIG00000005574)	eya3 (ENSTNIG00000000209)	si:ch211-195b13.1 (ENSTNIG00000005575)	ENSTNIG00000005576	srsf4 (ENSTNIG00000000115)	xkr8.3 (ENSTNIG00000003808)	eya3 (ENSTNIG00000008190)	si:ch211-195b13.1 (ENSTNIG00000002279)	myo1g (ENSTNIG00000004555)
Eupecaria_A	ANCESTRAL SPECIES	12	ENSGT00390000008551	ENSGT00940000163648.b	ENSGT00940000158729	ENSGT00390000012738	ENSGT00940000169005	ENSGT00390000010028	ENSGT00640000091536	ENSGT00950000182848.c.b.b.a	ENSGT00390000013601	ENSGT00940000157613	ENSGT00390000017955.c	ENSGT00940000156790	ENSGT00950000183028.a.b.b ##16	ENSGT00390000015257	ENSGT00390000011598	ENSGT00950000182941.a.a.b.e.b ##22	ENSGT00950000183163.a.a.bb ##23	ENSGT00940000154096.b.b.b.b.a ##25	ENSGT00510000048364	ENSGT00390000004808.f ##27	ENSGT00390000010118.c.a.b	ENSGT00940000155107.a.a.b ##32	ENSGT00560000078630	ENSGT00950000183008.a.a.a.b	ENSGT00940000160424	ENSGT00940000158242	ENSGT00950000183053.D	ENSGT00390000008812.b.a	ENSGT00940000158053	ENSGT00940000164496.a.a	ENSGT00950000182978.B
Ballan wrasse	MODERN SPECIES	178										cap1 (ENSLBEG00000018203)	ppt1 (ENSLBEG00000018087)	rragcb (ENSLBEG00000018067) #13	fhl3b (ENSLBEG00000018044) ##16	meaf6 (ENSLBEG00000018002)	stpg1 (ENSLBEG00000017959)	map7d1b (ENSLBEG00000017860) ##22	thrap3b (ENSLBEG00000017803) ##23	eva1bb (ENSLBEG00000017790) ##25	LSM10 (ENSLBEG00000017764)	ENSLBEG00000017744	oscp1a (ENSLBEG00000017707) ##27	ENSLBEG00000017687	ENSLBEG00000017654	zc3h12ab (ENSLBEG00000017593) ##32	smim13 (ENSLBEG00000017560)	nedd9 (ENSLBEG00000017548)	TMEM170B (ENSLBEG00000017533)	HIVEP1 (ENSLBEG00000017512)	edn1 (ENSLBEG00000017479)	si:dkeyp-92c9.2 (ENSLBEG00000017467)	myo1g (ENSLBEG00000017408)
Eupecaria_B	ANCESTRAL SPECIES	12	ENSGT00390000008551	ENSGT00940000163648.b	ENSGT00940000158729	ENSGT00390000012738	ENSGT00940000169005	ENSGT00390000010028	ENSGT00640000091536	ENSGT00950000182848.c.b.b.a	ENSGT00390000013601	ENSGT00940000157613	ENSGT00390000017955.c	ENSGT00940000156790	ENSGT00950000183028.a.b.b ##16	ENSGT00390000015257	ENSGT00390000011598	ENSGT00950000182941.a.a.b.e.b ##22	ENSGT00950000183163.a.a.bb ##23	ENSGT00940000154096.b.b.b.b.a ##25	ENSGT00510000048364	ENSGT00390000004808.f ##27	ENSGT00390000010118.c.a.b	ENSGT00940000155107.a.a.b ##32	ENSGT00560000078630	ENSGT00950000183008.a.a.a.b	ENSGT00940000160424	ENSGT00940000158242	ENSGT00950000183053.D	ENSGT00390000008812.b.a	ENSGT00940000158053	ENSGT00940000164496.a.a	ENSGT00950000182978.B
Perciformes	ANCESTRAL SPECIES	11	ENSGT00390000008551	ENSGT00940000163648.b	ENSGT00940000158729	ENSGT00390000012738	ENSGT00940000169005	ENSGT00390000010028	ENSGT00640000091536	ENSGT00950000182848.c.b.b.a	ENSGT00390000013601	ENSGT00940000157613	ENSGT00390000017955.c	ENSGT00940000156790	ENSGT00950000183028.a.b.b ##16	ENSGT00390000015257	ENSGT00390000011598	ENSGT00950000182941.a.a.b.e.b ##22	ENSGT00950000183163.a.a.bb ##23	ENSGT00940000154096.b.b.b.b.a ##25	ENSGT00510000048364	ENSGT00390000004808.f ##27	ENSGT00390000010118.c.a.b	ENSGT00940000155107.a.a.b ##32	ENSGT00560000078630	ENSGT00950000183008.a.a.a.b	ENSGT00940000160424	ENSGT00940000158242	ENSGT00950000183053.D	ENSGT00390000008812.b.a	ENSGT00940000158053	ENSGT00940000164496.a.a	ENSGT00950000182978.B
Cottioidei	ANCESTRAL SPECIES	16	ENSGT00390000008551	ENSGT00940000163648.b	ENSGT00940000158729	ENSGT00390000012738	ENSGT00940000169005	ENSGT00390000010028	ENSGT00640000091536	ENSGT00950000182848.c.b.b.a	ENSGT00390000013601	ENSGT00940000157613	ENSGT00390000017955.c	ENSGT00940000156790	ENSGT00950000183028.a.b.b ##16	ENSGT00390000015257	ENSGT00390000011598	ENSGT00950000182941.a.a.b.e.b ##22	ENSGT00950000183163.a.a.bb ##23	ENSGT00940000154096.b.b.b.b.a ##25	ENSGT00510000048364	ENSGT00390000004808.f ##27	ENSGT00940000155107.a.a.b ##32	ENSGT00560000078630	ENSGT00950000183008.a.a.a.b	ENSGT00940000160424	ENSGT00940000158242	ENSGT00950000183053.D	ENSGT00390000008812.b.a	ENSGT00940000158053	ENSGT00940000164496.a.a	ENSGT00950000182978.B	ENSGT01090000260093.b.f
Lumpfish	MODERN SPECIES	2	ENSCLMG00005022728	ago4 (ENSCLMG00005022462)	CLSPN (ENSCLMG00005022434)	ENSCLMG00005022430	cdca5 (ENSCLMG00005022429)	psmb2 (ENSCLMG00005022422)	tfap2e (ENSCLMG00005022419)	NCDN (ENSCLMG00005022416)	KIAA0319L (ENSCLMG00005022250)	cap1 (ENSCLMG00005022185)	ppt1 (ENSCLMG00005022130)	rragcb (ENSCLMG00005022126) #13	fhl3b (ENSCLMG00005022125) ##16	meaf6 (ENSCLMG00005022124)	stpg1 (ENSCLMG00005022122)	map7d1b (ENSCLMG00005022121) ##22	thrap3b (ENSCLMG00005022119) ##23	eva1bb (ENSCLMG00005022118) ##25	LSM10 (ENSCLMG00005022117)	oscp1a (ENSCLMG00005022114) ##27	zc3h12ab (ENSCLMG00005022113) ##32	smim13 (ENSCLMG00005022112)	nedd9 (ENSCLMG00005022110)	TMEM170B (ENSCLMG00005022109)	HIVEP1 (ENSCLMG00005022108)	ENSCLMG00005022107	ENSCLMG00005022106	edn1 (ENSCLMG00005022105)	si:dkeyp-92c9.2 (ENSCLMG00005022104)	myo1g (ENSCLMG00005021011)	si:ch211-195b13.1 (ENSCLMG00005020929)
Stickleback	MODERN SPECIES	9	c19h1orf109 (ENSGACG00000002689)	ENSGACG00000002688	ago4 (ENSGACG00000002683)	ENSGACG00000002679	ENSGACG00000002678	cdca5 (ENSGACG00000002675)	psmb2 (ENSGACG00000002674)	tfap2e (ENSGACG00000002672)	NCDN (ENSGACG00000002669)	KIAA0319L (ENSGACG00000002660)	cap1 (ENSGACG00000002653)	ppt1 (ENSGACG00000002641)	rragcb (ENSGACG00000002629) #13	fhl3b (ENSGACG00000002619) ##16	meaf6 (ENSGACG00000002615)	map7d1b (ENSGACG00000002607) ##22	pkhd1l1.2 (ENSGACG00000002583)	nudcd1 (ENSGACG00000002575)	trhrb (ENSGACG00000002573)	pleca (ENSGACG00000002566)	ENSGACG00000002563	ENSGACG00000002562	slc52a2 (ENSGACG00000002556)	ENSGACG00000002548	nfatc1 (ENSGACG00000002545)	atp9b (ENSGACG00000002539)	sall3b (ENSGACG00000002533)	GALR1 (ENSGACG00000002526)	ENSGACG00000002525	ENSGACG00000002516	scn1bb (ENSGACG00000002503)
Perciformes_a	ANCESTRAL SPECIES	14	ENSGT00940000163648.b	ENSGT00940000158729	ENSGT00390000012738	ENSGT00940000169005	ENSGT00390000010028	ENSGT00640000091536	ENSGT00950000182848.c.b.b.a	ENSGT00390000013601	ENSGT00940000157613	ENSGT00390000017955.c	ENSGT00940000156790	ENSGT00950000183031.A.a.a #13	ENSGT00950000183028.a.b.b ##16	ENSGT00390000015257	ENSGT00390000011598	ENSGT00950000182941.a.a.b.e.b ##22	ENSGT00950000183163.a.a.bb ##23	ENSGT00940000154096.b.b.b.b.a ##25	ENSGT00510000048364	ENSGT00390000004808.f ##27	ENSGT00390000010118.c.a.b	ENSGT00940000155107.a.a.b ##32	ENSGT00560000078630	ENSGT00950000183008.a.a.a.b	ENSGT00940000160424	ENSGT00940000158242	ENSGT00950000183053.D	ENSGT00390000008812.b.a	ENSGT00940000158053	ENSGT00940000164496.a.a	ENSGT00950000182978.B
Pike perch	MODERN SPECIES	13	ENSSLUG00000011352	ago4 (ENSSLUG00000006092)	CLSPN (ENSSLUG00000005829)	ENSSLUG00000005827	cdca5 (ENSSLUG00000005818)	psmb2 (ENSSLUG00000005805)	tfap2e (ENSSLUG00000005788)	NCDN (ENSSLUG00000005782)	KIAA0319L (ENSSLUG00000004935)	cap1 (ENSSLUG00000004853)	ppt1 (ENSSLUG00000004585)	rragcb (ENSSLUG00000004552) #13	fhl3b (ENSSLUG00000004540) ##16	meaf6 (ENSSLUG00000004526)	stpg1 (ENSSLUG00000004518)	map7d1b (ENSSLUG00000004454) ##22	thrap3b (ENSSLUG00000004422) ##23	eva1bb (ENSSLUG00000004412) ##25	LSM10 (ENSSLUG00000004403)	oscp1a (ENSSLUG00000004327) ##27	ENSSLUG00000004314	ENSSLUG00000004309	ENSSLUG00000004301	zc3h12ab (ENSSLUG00000004297) ##32	smim13 (ENSSLUG00000004292)	nedd9 (ENSSLUG00000004286)	TMEM170B (ENSSLUG00000004281)	HIVEP1 (ENSSLUG00000004271)	edn1 (ENSSLUG00000004261)	si:dkeyp-92c9.2 (ENSSLUG00000004255)	myo1g (ENSSLUG00000004127)
Channel bull blenny	MODERN SPECIES	2	ENSCGOG00000005608	ago4 (ENSCGOG00000005647)	CLSPN (ENSCGOG00000008234)	ENSCGOG00000008245	cdca5 (ENSCGOG00000008246)	psmb2 (ENSCGOG00000008253)	tfap2e (ENSCGOG00000008293)	NCDN (ENSCGOG00000008308)	KIAA0319L (ENSCGOG00000008351)	cap1 (ENSCGOG00000009184)	ppt1 (ENSCGOG00000009478)	rragcb (ENSCGOG00000009623) #13	fhl3b (ENSCGOG00000009706) ##16	meaf6 (ENSCGOG00000009716)	stpg1 (ENSCGOG00000009789)	map7d1b (ENSCGOG00000009797) ##22	thrap3b (ENSCGOG00000009838) ##23	eva1bb (ENSCGOG00000009852) ##25	LSM10 (ENSCGOG00000009858)	oscp1a (ENSCGOG00000009863) ##27	ENSCGOG00000009889	zc3h12ab (ENSCGOG00000009896) ##32	smim13 (ENSCGOG00000009899)	nedd9 (ENSCGOG00000009901)	TMEM170B (ENSCGOG00000009902)	ENSCGOG00000009908	ENSCGOG00000009927	ENSCGOG00000009931	ENSCGOG00000009936	ENSCGOG00000009965	ENSCGOG00000009966
Eupecaria_C	ANCESTRAL SPECIES	13	ENSGT00940000164552	ENSGT00390000011115	ENSGT00390000008551	ENSGT00940000163648.b	ENSGT00940000158729	ENSGT00390000012738	ENSGT00640000091536	ENSGT00950000182848.c.b.b.a	ENSGT00390000013601	ENSGT00940000157613	ENSGT00390000017955.c	ENSGT00940000156790	ENSGT00950000183028.a.b.b ##16	ENSGT00390000015257	ENSGT00390000011598	ENSGT00950000182941.a.a.b.e.b ##22	ENSGT00950000183163.a.a.bb ##23	ENSGT00940000154096.b.b.b.b.a ##25	ENSGT00510000048364	ENSGT00390000004808.f ##27	ENSGT00390000010118.c.a.b	ENSGT00940000155107.a.a.b ##32	ENSGT00560000078630	ENSGT00950000183008.a.a.a.b	ENSGT00940000160424	ENSGT00940000158242	ENSGT00950000183053.D	ENSGT00390000008812.b.a	ENSGT00940000158053	ENSGT00940000164496.a.a	ENSGT00950000182978.B
Eupercaria_incertae_sedis	ANCESTRAL SPECIES	10	ENSGT00390000011115	ENSGT00390000008551	ENSGT00940000163648.b	ENSGT00940000158729	ENSGT00390000012738	ENSGT00640000091536	ENSGT00950000182848.c.b.b.a	ENSGT00390000013601	ENSGT00940000157613	ENSGT00390000017955.c	ENSGT00940000156790	ENSGT00950000183031.A.a.a #13	ENSGT00950000183028.a.b.b ##16	ENSGT00390000015257	ENSGT00390000011598	ENSGT00950000182941.a.a.b.e.b ##22	ENSGT00950000183163.a.a.bb ##23	ENSGT00940000154096.b.b.b.b.a ##25	ENSGT00510000048364	ENSGT00390000004808.f ##27	ENSGT00390000010118.c.a.b	ENSGT00940000155107.a.a.b ##32	ENSGT00560000078630	ENSGT00950000183008.a.a.a.b	ENSGT00940000160424	ENSGT00940000158242	ENSGT00950000183053.D	ENSGT00390000008812.b.a	ENSGT00940000158053	ENSGT00940000164496.a.a	ENSGT00950000182978.B
European seabass	MODERN SPECIES	22	ENSDLAG00005030850	ENSDLAG00005013457	AGO4 (ENSDLAG00005013573)	CLSPN (ENSDLAG00005016583)	beta 2 (ENSDLAG00005034806)	ENSDLAG00005016605	tfap2e (ENSDLAG00005016618)	NCDN (ENSDLAG00005016625)	KIAA0319L (ENSDLAG00005016664)	ENSDLAG00005017641	ppt1 (ENSDLAG00005032737)	rragcb (ENSDLAG00005018704) #13	fhl3b (ENSDLAG00005018713) ##16	meaf6 (ENSDLAG00005018732)	stpg1 (ENSDLAG00005026697)	map7d1b (ENSDLAG00005018751) ##22	thrap3b (ENSDLAG00005018774) ##23	eva1bb (ENSDLAG00005002280) ##25	LSM10 (ENSDLAG00005002297)	oscp1a (ENSDLAG00005002331) ##27	ENSDLAG00005035131	zc3h12ab (ENSDLAG00005002900) ##32	smim13 (ENSDLAG00005002917)	nedd9 (ENSDLAG00005002936)	TMEM170B (ENSDLAG00005030210)	HIVEP1 (ENSDLAG00005002969)	edn1 (ENSDLAG00005002998)	si:dkeyp-92c9.2 (ENSDLAG00005030433)	myo1g (ENSDLAG00005003113)	si:ch211-195b13.1 (ENSDLAG00005033105)	eya3 (ENSDLAG00005005939)
Large yellow croaker	MODERN SPECIES	484	ago4 (ENSLCRG00005004900)	CLSPN (ENSLCRG00005004867)	ENSLCRG00005004866	cdca5 (ENSLCRG00005004865)	psmb2 (ENSLCRG00005004853)	tfap2e (ENSLCRG00005004851)	NCDN (ENSLCRG00005004849)	ENSLCRG00005004848	KIAA0319L (ENSLCRG00005002018)	cap1 (ENSLCRG00005001693)	ppt1 (ENSLCRG00005000758)	rragcb (ENSLCRG00005000695) #13	fhl3b (ENSLCRG00005000684) ##16	meaf6 (ENSLCRG00005000657)	stpg1 (ENSLCRG00005000640)	map7d1b (ENSLCRG00005020478) ##22	thrap3b (ENSLCRG00005020473) ##23	eva1bb (ENSLCRG00005020472) ##25	LSM10 (ENSLCRG00005020471)	oscp1a (ENSLCRG00005020381) ##27	ENSLCRG00005020362	zc3h12ab (ENSLCRG00005020357) ##32	smim13 (ENSLCRG00005020351)	nedd9 (ENSLCRG00005020348)	pip5k1aa (ENSLCRG00005020307)	psmd4a (ENSLCRG00005020248)	znf687b (ENSLCRG00005020231)	aqp10b (ENSLCRG00005020225)	hax1 (ENSLCRG00005020218)	ubap2l (ENSLCRG00005020158)	C1orf43 (ENSLCRG00005020121)
Gilthead seabream	MODERN SPECIES	17	ENSSAUG00010010430	c19h1orf109 (ENSSAUG00010010428)	ago4 (ENSSAUG00010008440)	CLSPN (ENSSAUG00010008404)	ENSSAUG00010008403	cdca5 (ENSSAUG00010008401)	psmb2 (ENSSAUG00010008400)	tfap2e (ENSSAUG00010008399)	NCDN (ENSSAUG00010008396)	KIAA0319L (ENSSAUG00010005044)	cap1 (ENSSAUG00010004535)	rragcb (ENSSAUG00010004527) #13	fhl3b (ENSSAUG00010004524) ##16	ppt1 (ENSSAUG00010004438)	stpg1 (ENSSAUG00010004417)	map7d1b (ENSSAUG00010004404) ##22	thrap3b (ENSSAUG00010004395) ##23	eva1bb (ENSSAUG00010004385) ##25	LSM10 (ENSSAUG00010004379)	ENSSAUG00010004375	oscp1a (ENSSAUG00010004367) ##27	zc3h12ab (ENSSAUG00010004363) ##32	smim13 (ENSSAUG00010004360)	nedd9 (ENSSAUG00010004355)	TMEM170B (ENSSAUG00010004349)	HIVEP1 (ENSSAUG00010004340)	edn1 (ENSSAUG00010004330)	si:dkeyp-92c9.2 (ENSSAUG00010004322)	myo1g (ENSSAUG00010003283)	si:ch211-195b13.1 (ENSSAUG00010027518)	eya3 (ENSSAUG00010027490)
Cod	MODERN SPECIES	14	ENSGMOG00000037177	ENSGMOG00000009525	psmb2 (ENSGMOG00000028958)	TFAP2E (ENSGMOG00000009513)	NCDN (ENSGMOG00000022584)	KIAA0319L (ENSGMOG00000012803)	ENSGMOG00000029342	ENSGMOG00000024806	ENSGMOG00000035476	ENSGMOG00000015918	ENSGMOG00000015901	rragcb (ENSGMOG00000015890) #13	fhl3b (ENSGMOG00000033464) ##16	meaf6 (ENSGMOG00000007357)	stpg1 (ENSGMOG00000024695)	map7d1b (ENSGMOG00000022540) ##22	ENSGMOG00000001665	thrap3b (ENSGMOG00000023763) ##23	eva1bb (ENSGMOG00000017569) ##25	LSM10 (ENSGMOG00000019832)	oscp1a (ENSGMOG00000017579) ##27	ENSGMOG00000017593	ENSGMOG00000026488	zc3h12ab (ENSGMOG00000030776) ##32	smim13 (ENSGMOG00000025692)	nedd9 (ENSGMOG00000030633)	TMEM170B (ENSGMOG00000029827)	HIVEP1 (ENSGMOG00000011398)	edn1 (ENSGMOG00000034660)	myo1g (ENSGMOG00000011448)	si:ch211-195b13.1 (ENSGMOG00000012874)
Protacanthopterygii	ANCESTRAL SPECIES	12	ENSGT00940000158669	ENSGT00940000164147.a	ENSGT00940000160519.a.a	ENSGT00940000154450.uc	ENSGT00530000063881.a.b #7	ENSGT01060000248564.a.b #8	ENSGT00940000158787 #9	ENSGT00940000159442 #10	ENSGT00390000017974.ob ##12	ENSGT01090000260070.C.a #11	ENSGT00390000017974.nb #12	ENSGT00950000183031.A.a.a #13	ENSGT00950000183028.a.b.b ##16	ENSGT00390000015257	ENSGT00390000011598	ENSGT00950000182941.a.a.b.e.b ##22	ENSGT00950000183163.a.a.bb ##23	ENSGT00940000154096.b.b.b.b.a ##25	ENSGT00510000048364	ENSGT00390000004808.f ##27	ENSGT00390000010118.c.a.b	ENSGT00940000155107.a.a.b ##32	ENSGT00560000078630	ENSGT00950000183008.a.a.a.b	ENSGT00940000160424	ENSGT00940000158242	ENSGT00950000183053.D	ENSGT00390000008812.b.a	ENSGT00940000158053	ENSGT00940000164496.a.a	ENSGT00950000182978.B
Salmoninae	DUPLICATION
Salmoninae	ANCESTRAL SPECIES	362		ENSGT00550000074870.y.b.b	ENSGT00910000144277.f.b.a	ENSGT00390000014274	ENSGT00940000156338.b.d	ENSGT00940000159312.d	ENSGT00940000164147.b	ENSGT00940000154450.tc.a	ENSGT00940000158787.h.a #9	ENSGT01090000260070.C.b.d ##11	ENSGT00390000017974.ob.f ##12	ENSGT00950000183031.A.a.a.b #13	ENSGT00950000183028.a.b.b.f ##16	ENSGT00390000015257.h	ENSGT00390000011598	ENSGT00950000182941.a.a.b.e.b.e ##22	ENSGT00950000183163.a.a.bb.c ##23	ENSGT00940000154096.b.b.b.b.a.b ##25	ENSGT00940000181189	ENSGT00510000049601.j	ENSGT00390000004808.f ##27	ENSGT00390000010118.c.a.b.c	ENSGT00940000155107.a.a.b.d ##32	ENSGT00560000078630	ENSGT00950000183008.a.a.a.b.g	ENSGT00940000160424	ENSGT00940000158242.k	ENSGT00950000183053.D.g	ENSGT00990000212595	ENSGT00390000008812.b.a.c	ENSGT00940000158053.u
Salmoninae_a	ANCESTRAL SPECIES	5	ENSGT00940000159104.d.d	ENSGT00940000158587.c.a	ENSGT00390000014274	ENSGT00940000156338.b.d	ENSGT00940000159312.d	ENSGT00940000164147.b	ENSGT00940000154450.tc.a	ENSGT00990000212118	ENSGT00940000158787.h.a #9	ENSGT01090000260070.C.b.d ##11	ENSGT00390000017974.ob.f ##12	ENSGT00950000183031.A.a.a.b #13	ENSGT00950000183028.a.b.b.f ##16	ENSGT00390000015257.h	ENSGT00390000011598	ENSGT00950000182941.a.a.b.e.b.e ##22	ENSGT00950000183163.a.a.bb.c ##23	ENSGT00940000154096.b.b.b.b.a.b ##25	ENSGT00940000181189	ENSGT00510000049601.j	ENSGT00390000004808.f ##27	ENSGT00390000010118.c.a.b.c	ENSGT00940000155107.a.a.b.d ##32	ENSGT00560000078630.h	ENSGT00950000183008.a.a.a.b.g	ENSGT00940000160424	ENSGT00940000158242.k	ENSGT00950000183053.D.g	ENSGT00990000212595	ENSGT00390000008812.b.a.c	ENSGT00940000158053.u
Salmo	ANCESTRAL SPECIES	2	ENSGT00550000074870.y.b.b	ENSGT00910000144277.f.b.a	ENSGT00390000014274	ENSGT00940000156338.b.d	ENSGT00940000159312.d	ENSGT00940000164147.b	ENSGT00940000154450.tc.a	ENSGT00990000212118	ENSGT00940000158787.h.a #9	ENSGT01090000260070.C.b.d ##11	ENSGT00390000017974.ob.f ##12	ENSGT00950000183031.A.a.a.b #13	ENSGT00950000183028.a.b.b.f ##16	ENSGT00390000015257.h	ENSGT00390000011598	ENSGT00950000182941.a.a.b.e.b.e ##22	ENSGT00950000183163.a.a.bb.c ##23	ENSGT00940000154096.b.b.b.b.a.b ##25	ENSGT00940000181189	ENSGT00510000049601.j	ENSGT00390000004808.f ##27	ENSGT00390000010118.c.a.b.c	ENSGT00940000155107.a.a.b.d ##32	ENSGT00560000078630.h	ENSGT00950000183008.a.a.a.b.g	ENSGT00940000160424.c	ENSGT00940000158242.k	ENSGT00950000183053.D.g	ENSGT00390000008812.b.a.c	ENSGT00940000158053.u	ENSGT00940000164496.a.a.b
Atlantic salmon	MODERN SPECIES	5	PSA2 (ENSSSAG00000026601)	ENSSSAG00000020652	ccdc127 (ENSSSAG00000020001)	ENSSSAG00000018117	slc9a1b (ENSSSAG00000017046)	ENSSSAG00000009871	srsf10b (ENSSSAG00000104443)	ENSSSAG00000009809	ENSSSAG00000009802 #9	gja9b (ENSSSAG00000009793) ##11	mycbp (ENSSSAG00000115673) ##12	ENSSSAG00000101880 #13	fhl3 (ENSSSAG00000009766) ##16	meaf6 (ENSSSAG00000009744)	stpg1 (ENSSSAG00000009729)	map7d1b (ENSSSAG00000009702) ##22	thrap3b (ENSSSAG00000009695) ##23	CA078 (ENSSSAG00000009689) ##25	ENSSSAG00000106209	oscp1a (ENSSSAG00000009407) ##27	ENSSSAG00000009391	zc3h12ab (ENSSSAG00000087542) ##32	ENSSSAG00000092580	nedd9 (ENSSSAG00000009361)	TMEM170B (ENSSSAG00000112888)	HIVEP1 (ENSSSAG00000009332)	edn1 (ENSSSAG00000119261)	ENSSSAG00000119580	si:dkeyp-92c9.2 (ENSSSAG00000103119)	myo1g (ENSSSAG00000008639)	si:ch211-195b13.1 (ENSSSAG00000008591)
River trout	MODERN SPECIES	29	ENSSTUG00000037835	sdha (ENSSTUG00000037969)	ccdc127b (ENSSTUG00000038676)	CFAP69 (ENSSTUG00000038689)	slc9a1b (ENSSTUG00000038794)	MAN1C1 (ENSSTUG00000039533)	ENSSTUG00000039655	srsf10b (ENSSTUG00000039664)	ENSSTUG00000039678	ENSSTUG00000039683 #9	mycbp (ENSSTUG00000039721) ##12	ENSSTUG00000039736 #13	fhl3b (ENSSTUG00000039744) ##16	meaf6 (ENSSTUG00000039757)	stpg1 (ENSSTUG00000039823)	map7d1b (ENSSTUG00000039850) ##22	thrap3b (ENSSTUG00000039900) ##23	eva1bb (ENSSTUG00000039941) ##25	ENSSTUG00000039956	gstr (ENSSTUG00000039963)	oscp1a (ENSSTUG00000039983) ##27	ENSSTUG00000040003	zc3h12ab (ENSSTUG00000040008) ##32	smim13 (ENSSTUG00000040014)	nedd9 (ENSSTUG00000040022)	TMEM170B (ENSSTUG00000040049)	HIVEP1 (ENSSTUG00000040056)	edn1 (ENSSTUG00000040060)	si:dkeyp-92c9.2 (ENSSTUG00000040079)	myo1g (ENSSTUG00000040110)	si:ch211-195b13.1 (ENSSTUG00000040952)
Oncorhynchus	ANCESTRAL SPECIES	16	ENSGT00390000008818	ENSGT00940000164635	ENSGT00390000014274	ENSGT00940000156338.b.d	ENSGT00940000159312.d	ENSGT00940000164147.b	ENSGT00940000154450.tc.a	ENSGT00990000212118	ENSGT00940000158787.h.a #9	ENSGT01090000260070.C.b.d ##11	ENSGT00390000017974.ob.f ##12	ENSGT00950000183031.A.a.a.b #13	ENSGT00950000183028.a.b.b.f ##16	ENSGT00390000015257.h	ENSGT00390000011598	ENSGT00950000182941.a.a.b.e.b.e ##22	ENSGT00950000183163.a.a.bb.c ##23	ENSGT00940000154096.b.b.b.b.a.b ##25	ENSGT00940000181189	ENSGT00510000049601.j	ENSGT00390000004808.f ##27	ENSGT00390000010118.c.a.b.c	ENSGT00940000155107.a.a.b.d ##32	ENSGT00560000078630.h	ENSGT00950000183008.a.a.a.b.g	ENSGT00940000160424.f	ENSGT00940000158242.k	ENSGT00950000183053.D.g	ENSGT00990000212595	ENSGT00390000008812.b.a.c	ENSGT00940000158053.u
Oncorhynchus_a	ANCESTRAL SPECIES	6	ENSGT00550000074870.y.b.a.b	ENSGT00910000144277.f.b.a	ENSGT00390000014274	ENSGT00940000156338.b.d	ENSGT00940000159312.d	ENSGT00940000164147.b	ENSGT00940000154450.tc.a	ENSGT00990000212118	ENSGT00940000158787.h.a #9	ENSGT01090000260070.C.b.d ##11	ENSGT00390000017974.ob.f ##12	ENSGT00950000183031.A.a.a.b #13	ENSGT00950000183028.a.b.b.f ##16	ENSGT00390000015257.h	ENSGT00390000011598	ENSGT00950000182941.a.a.b.e.b.e ##22	ENSGT00950000183163.a.a.bb.c ##23	ENSGT00940000154096.b.b.b.b.a.b ##25	ENSGT00940000181189	ENSGT00510000049601.j	ENSGT00390000004808.f ##27	ENSGT00390000010118.c.a.b.c	ENSGT00940000155107.a.a.b.d ##32	ENSGT00560000078630.h	ENSGT00950000183008.a.a.a.b.g	ENSGT00940000160424.f	ENSGT00940000158242.k	ENSGT00950000183053.D.g	ENSGT00990000212595	ENSGT00390000008812.b.a.c	ENSGT00940000158053.u
Coho salmon	MODERN SPECIES	5	ccdc127b (ENSOKIG00005005635)	ENSOKIG00005005629	CFAP69 (ENSOKIG00005005523)	slc9a1b (ENSOKIG00005004498)	MAN1C1 (ENSOKIG00005022347)	ENSOKIG00005022330	srsf10b (ENSOKIG00005022322)	ENSOKIG00005022314	ENSOKIG00005022300 #9	gja9b (ENSOKIG00005022289) ##11	mycbp (ENSOKIG00005022266) ##12	ENSOKIG00005022253 #13	fhl3b (ENSOKIG00005022242) ##16	meaf6 (ENSOKIG00005022194)	stpg1 (ENSOKIG00005022179)	map7d1b (ENSOKIG00005022142) ##22	thrap3b (ENSOKIG00005022125) ##23	eva1bb (ENSOKIG00005022113) ##25	ENSOKIG00005022105	gstr (ENSOKIG00005022094)	oscp1a (ENSOKIG00005022041) ##27	ENSOKIG00005022035	zc3h12ab (ENSOKIG00005022030) ##32	smim13 (ENSOKIG00005022016)	nedd9 (ENSOKIG00005022006)	TMEM170B (ENSOKIG00005021995)	HIVEP1 (ENSOKIG00005021986)	edn1 (ENSOKIG00005021979)	ENSOKIG00005021969	si:dkeyp-92c9.2 (ENSOKIG00005021966)	myo1g (ENSOKIG00005021794)
Chinook salmon	MODERN SPECIES	24	sdha (ENSOTSG00005006359)	ccdc127b (ENSOTSG00005006427)	ENSOTSG00005006428	CFAP69 (ENSOTSG00005006429)	slc9a1b (ENSOTSG00005006434)	MAN1C1 (ENSOTSG00005006586)	ENSOTSG00005006591	srsf10b (ENSOTSG00005006592)	ENSOTSG00005006595 #9	gja9b (ENSOTSG00005006597) ##11	mycbp (ENSOTSG00005006599) ##12	ENSOTSG00005006600 #13	fhl3b (ENSOTSG00005006601) ##16	meaf6 (ENSOTSG00005006603)	stpg1 (ENSOTSG00005006604)	map7d1b (ENSOTSG00005006605) ##22	thrap3b (ENSOTSG00005006607) ##23	eva1bb (ENSOTSG00005006608) ##25	ENSOTSG00005006609	gstr (ENSOTSG00005006610)	oscp1a (ENSOTSG00005006612) ##27	ENSOTSG00005006617	zc3h12ab (ENSOTSG00005006618) ##32	ENSOTSG00005006620	smim13 (ENSOTSG00005006622)	nedd9 (ENSOTSG00005006624)	TMEM170B (ENSOTSG00005006626)	HIVEP1 (ENSOTSG00005006631)	edn1 (ENSOTSG00005006634)	si:dkeyp-92c9.2 (ENSOTSG00005006642)	myo1g (ENSOTSG00005006644)
Rainbow trout	MODERN SPECIES	24	ENSOMYG00000000281	ENSOMYG00000006505	ENSOMYG00000006584	slc9a1b (ENSOMYG00000007199)	ENSOMYG00000008042	ENSOMYG00000008120	srsf10b (ENSOMYG00000071968)	ENSOMYG00000008154	ENSOMYG00000008192 #9	gja9b (ENSOMYG00000069617) ##11	mycbp (ENSOMYG00000008266) ##12	ENSOMYG00000008221 #13	fhl3b (ENSOMYG00000008287) ##16	meaf6 (ENSOMYG00000008396)	stpg1 (ENSOMYG00000008440)	map7d1b (ENSOMYG00000008563) ##22	thrap3b (ENSOMYG00000008733) ##23	eva1bb (ENSOMYG00000008754) ##25	ENSOMYG00000054099	ENSOMYG00000008773	ENSOMYG00000008805	oscp1a (ENSOMYG00000008917) ##27	ENSOMYG00000008955	zc3h12ab (ENSOMYG00000058082) ##32	smim13 (ENSOMYG00000008986)	nedd9 (ENSOMYG00000009014)	TMEM170B (ENSOMYG00000048814)	HIVEP1 (ENSOMYG00000009085)	ENSOMYG00000074796	edn1 (ENSOMYG00000077425)	si:dkeyp-92c9.2 (ENSOMYG00000009133)
Huchen	MODERN SPECIES	249	sdha (ENSHHUG00000028697)	ccdc127b (ENSHHUG00000029169)	ENSHHUG00000029171	CFAP69 (ENSHHUG00000029173)	slc9a1b (ENSHHUG00000029191)	MAN1C1 (ENSHHUG00000029227)	ENSHHUG00000029263	srsf10b (ENSHHUG00000029267)	ENSHHUG00000029272 #9	gja9b (ENSHHUG00000029286) ##11	mycbp (ENSHHUG00000029287) ##12	ENSHHUG00000029301 #13	fhl3b (ENSHHUG00000029346) ##16	meaf6 (ENSHHUG00000029351)	stpg1 (ENSHHUG00000029428)	map7d1b (ENSHHUG00000029434) ##22	thrap3b (ENSHHUG00000029460) ##23	eva1bb (ENSHHUG00000029470) ##25	ENSHHUG00000029474	gstr (ENSHHUG00000029478)	oscp1a (ENSHHUG00000029498) ##27	ENSHHUG00000029507	zc3h12ab (ENSHHUG00000029509) ##32	ENSHHUG00000029512	nedd9 (ENSHHUG00000029518)	TMEM170B (ENSHHUG00000029522)	HIVEP1 (ENSHHUG00000029527)	edn1 (ENSHHUG00000029529)	ENSHHUG00000029540	si:dkeyp-92c9.2 (ENSHHUG00000029553)	ENSHHUG00000029556
Salmoninae	ANCESTRAL SPECIES	513																ENSGT00950000182941.a.a.b.e.b.f ##22	ENSGT00950000183163.a.a.bb.d ##23	ENSGT00940000154096.b.b.b.b.a.a ##25	ENSGT00390000010118.c.a.b.d	ENSGT00940000155107.a.a.b.c ##32	ENSGT00950000183008.a.a.a.b.h	ENSGT00940000158242.l	ENSGT00950000183053.D.h	ENSGT00390000008812.b.a.d	ENSGT00940000158053.v	ENSGT00940000164496.a.a.a	ENSGT00950000182978.B.f	ENSGT01090000260093.b.f.u	ENSGT01090000260093.b.e	ENSGT00940000156213.q.a	ENSGT00940000156213.q.b.b
Salmoninae_a	ANCESTRAL SPECIES	28	ENSGT00940000157893.c.b	ENSGT00390000014398	ENSGT00550000074870.y.b.a	ENSGT00910000144277.f.b.b	ENSGT00990000212686	ENSGT00940000157751	ENSGT00940000156338.b.c	ENSGT01090000260268.B	ENSGT01060000251440	ENSGT00940000154450.tc.b	ENSGT00940000158787.h.b #9	ENSGT01090000260070.C.b.c ##11	ENSGT00390000017974.ob.e ##12	ENSGT00950000183028.a.b.b.e ##16	ENSGT00390000015257.g	ENSGT00950000182941.a.a.b.e.b.f ##22	ENSGT00950000183163.a.a.bb.d ##23	ENSGT00940000154096.b.b.b.b.a.a ##25	ENSGT00390000010118.c.a.b.d	ENSGT00940000155107.a.a.b.c ##32	ENSGT00940000156772.b.d.a	ENSGT00560000078630.g	ENSGT00950000183008.a.a.a.b.h	ENSGT00940000158242.l	ENSGT00950000183053.D.h	ENSGT00390000008812.b.a.d	ENSGT00940000158053.v	ENSGT00940000164496.a.a.a	ENSGT00950000182978.B.f	ENSGT01090000260093.b.f.u	ENSGT01090000260093.b.e
Oncorhynchus	ANCESTRAL SPECIES	29	ENSGT00980000199189.c	ENSGT00530000063461.A.b.a	ENSGT00940000157893.c.b	ENSGT00390000014398	ENSGT00550000074870.y.b.a	ENSGT00910000144277.f.b.b	ENSGT00990000212686	ENSGT00940000157751	ENSGT01060000251440	ENSGT00940000154450.tc.b	ENSGT00940000158787.h.b #9	ENSGT01090000260070.C.b.c ##11	ENSGT00390000017974.ob.e ##12	ENSGT00950000183028.a.b.b.e ##16	ENSGT00390000015257.g	ENSGT00950000182941.a.a.b.e.b.f ##22	ENSGT00950000183163.a.a.bb.d ##23	ENSGT00940000154096.b.b.b.b.a.a ##25	ENSGT00390000010118.c.a.b.d	ENSGT00940000155107.a.a.b.c ##32	ENSGT00940000156772.b.d.a	ENSGT00560000078630.g	ENSGT00950000183008.a.a.a.b.h	ENSGT00940000160424.e.a	ENSGT00940000158242.l	ENSGT00950000183053.D.h	ENSGT00390000008812.b.a.d	ENSGT00940000158053.v	ENSGT00940000164496.a.a.a	ENSGT00950000182978.B.f	ENSGT01090000260093.b.f.u
Oncorhynchus_a	ANCESTRAL SPECIES	29	ENSGT00950000182901	ENSGT00940000157893.c.b	ENSGT00390000014398	ENSGT00550000074870.y.b.a.a	ENSGT00910000144277.f.b.b	ENSGT00990000212686	ENSGT00940000157751	ENSGT01010000222294.c.b.b.b.c.a.a.b.b.b	ENSGT01060000251440	ENSGT00940000154450.tc.b	ENSGT00940000158787.h.b #9	ENSGT01090000260070.C.b.c ##11	ENSGT00390000017974.ob.e ##12	ENSGT00950000183028.a.b.b.e ##16	ENSGT00390000015257.g	ENSGT00950000182941.a.a.b.e.b.f ##22	ENSGT00950000183163.a.a.bb.d ##23	ENSGT00940000154096.b.b.b.b.a.a ##25	ENSGT00390000010118.c.a.b.d	ENSGT00940000155107.a.a.b.c ##32	ENSGT00940000156772.b.d.a	ENSGT00560000078630.g	ENSGT00950000183008.a.a.a.b.h	ENSGT00940000158242.l	ENSGT00950000183053.D.h	ENSGT00390000008812.b.a.d	ENSGT00940000158053.v	ENSGT00940000164496.a.a.a	ENSGT00950000182978.B.f	ENSGT01090000260093.b.f.u	ENSGT01090000260093.b.e
Coho salmon	MODERN SPECIES	8	wdyhv1 (ENSOKIG00005011861)	PSMA2 (ENSOKIG00005011832)	SDHA (ENSOKIG00005011241)	ENSOKIG00005011197	KDM1B (ENSOKIG00005008784)	ENSOKIG00005008619	ENSOKIG00005008596	srsf10b (ENSOKIG00005008586)	ENSOKIG00005008560 #9	gja9b (ENSOKIG00005008547) ##11	mycbp (ENSOKIG00005008503) ##12	ENSOKIG00005008490	fhl3b (ENSOKIG00005008474) ##16	meaf6 (ENSOKIG00005008377)	ENSOKIG00005008358	map7d1b (ENSOKIG00005008325) ##22	thrap3b (ENSOKIG00005008296) ##23	eva1bb (ENSOKIG00005008280) ##25	ENSOKIG00005008272	ENSOKIG00005008256	zc3h12ab (ENSOKIG00005008248) ##32	ENSOKIG00005008239	smim13 (ENSOKIG00005008230)	nedd9 (ENSOKIG00005008220)	ENSOKIG00005008209	HIVEP1 (ENSOKIG00005008183)	edn1 (ENSOKIG00005008167)	si:dkeyp-92c9.2 (ENSOKIG00005008159)	myo1g (ENSOKIG00005008044)	si:ch211-195b13.1 (ENSOKIG00005007972)	eya3 (ENSOKIG00005007614)
Chinook salmon	MODERN SPECIES	168																map7d1b (ENSOTSG00005040502) ##22	thrap3b (ENSOTSG00005040504) ##23	eva1bb (ENSOTSG00005040505) ##25	ENSOTSG00005040507	ENSOTSG00005040508	zc3h12ab (ENSOTSG00005040509) ##32	ENSOTSG00005040511	smim13 (ENSOTSG00005040513)	nedd9 (ENSOTSG00005040514)	ENSOTSG00005040515
Salmo	ANCESTRAL SPECIES	2	ENSGT00940000157893.c.b	ENSGT00390000014398	ENSGT00550000074870.z	ENSGT00910000144277.f.b.b	ENSGT00990000212686	ENSGT00940000157751	ENSGT00940000156338.b.c	ENSGT01090000260268.B	ENSGT01060000251440	ENSGT00940000154450.tc.b	ENSGT00940000158787.h.b #9	ENSGT01090000260070.C.b.c ##11	ENSGT00390000017974.ob.e ##12	ENSGT00950000183028.a.b.b.e ##16	ENSGT00390000015257.g	ENSGT00950000182941.a.a.b.e.b.f ##22	ENSGT00950000183163.a.a.bb.d ##23	ENSGT00940000154096.b.b.b.b.a.a ##25	ENSGT00390000010118.c.a.b.d	ENSGT00940000155107.a.a.b.c ##32	ENSGT00940000156772.b.d.a	ENSGT00560000078630.g	ENSGT00950000183008.a.a.a.b.h	ENSGT00940000160424.d	ENSGT00940000158242.l	ENSGT00950000183053.D.h	ENSGT00390000008812.b.a.d	ENSGT00940000158053.v	ENSGT00940000164496.a.a.a	ENSGT00950000182978.B.f	ENSGT01090000260093.b.f.u
Atlantic salmon	MODERN SPECIES	19	ENSSSAG00000065020	ENSSSAG00000095756	ENSSSAG00000095425	PSA2 (ENSSSAG00000065065)	sdha (ENSSSAG00000065157)	ENSSSAG00000065391	ENSSSAG00000065417	ENSSSAG00000065537	ENSSSAG00000065544	fusip (ENSSSAG00000065557)	ENSSSAG00000065563 #9	ENSSSAG00000065568 ##11	MYCBP (ENSSSAG00000065576) ##12	fhl3b (ENSSSAG00000029717) ##16	meaf6 (ENSSSAG00000065622)	map7d1b (ENSSSAG00000065668) ##22	ENSSSAG00000120157	ENSSSAG00000107737	thrap3b (ENSSSAG00000065686) ##23	ENSSSAG00000112097	eva1bb (ENSSSAG00000065693) ##25	ENSSSAG00000097800	ENSSSAG00000082376	zc3h12ab (ENSSSAG00000065703) ##32	ENSSSAG00000065705	nedd9 (ENSSSAG00000065717)	TMEM170B (ENSSSAG00000113777)	HIVEP1 (ENSSSAG00000065742)	edn1 (ENSSSAG00000101758)	ENSSSAG00000115447	si:dkeyp-92c9.2 (ENSSSAG00000100702)
River trout	MODERN SPECIES	27	trps1 (ENSSTUG00000049546)	ENSSTUG00000049547	wdyhv1 (ENSSTUG00000049549)	ENSSTUG00000049554	sdha (ENSSTUG00000049562)	ENSSTUG00000049646	KDM1B (ENSSTUG00000049671)	ENSSTUG00000049820	ENSSTUG00000049824	srsf10b (ENSSTUG00000049827)	ENSSTUG00000049828 #9	gja9b (ENSSTUG00000049829) ##11	mycbp (ENSSTUG00000049830) ##12	fhl3b (ENSSTUG00000049833) ##16	meaf6 (ENSSTUG00000049837)	map7d1b (ENSSTUG00000049845) ##22	thrap3b (ENSSTUG00000049859) ##23	eva1bb (ENSSTUG00000049862) ##25	ENSSTUG00000049864	ENSSTUG00000049865	zc3h12ab (ENSSTUG00000049867) ##32	ENSSTUG00000049870	ENSSTUG00000049873	smim13 (ENSSTUG00000049875)	nedd9 (ENSSTUG00000049876)	TMEM170B (ENSSTUG00000049879)	ENSSTUG00000049882	ENSSTUG00000049883	HIVEP1 (ENSSTUG00000049885)	edn1 (ENSSTUG00000049892)	ENSSTUG00000049896
Northern pike	MODERN SPECIES	9	KDM1B (ENSELUG00000008094)	CFAP69 (ENSELUG00000007995)	slc9a1b (ENSELUG00000007970)	ENSELUG00000034496	ENSELUG00000000287	ENSELUG00000007901	srsf10b (ENSELUG00000007888)	ENSELUG00000029192	akirin1 (ENSELUG00000007858) #9	gja9b (ENSELUG00000007830) ##11	mycbp (ENSELUG00000031004) ##12	ENSELUG00000007786 #13	fhl3b (ENSELUG00000007755) ##16	meaf6 (ENSELUG00000028481)	stpg1 (ENSELUG00000007684)	map7d1b (ENSELUG00000007639) ##22	thrap3b (ENSELUG00000007499) ##23	eva1bb (ENSELUG00000030974) ##25	LSM10 (ENSELUG00000007452)	oscp1a (ENSELUG00000007413) ##27	ENSELUG00000007378	ENSELUG00000029369	zc3h12ab (ENSELUG00000007368) ##32	smim13 (ENSELUG00000030404)	nedd9 (ENSELUG00000007314)	TMEM170B (ENSELUG00000007252)	HIVEP1 (ENSELUG00000007223)	edn1 (ENSELUG00000007183)	rbm24a (ENSELUG00000007163)	cap2 (ENSELUG00000007130)	ENSELUG00000027226
Osteoglossiformes	ANCESTRAL SPECIES	1										ENSGT00990000203527.b	ENSGT00950000182894.D	ENSGT00940000156338.b	ENSGT00390000017974.ob ##12	ENSGT00950000183028.a.b.b ##16	ENSGT00390000011598	ENSGT00950000182941.a.a.b.e.b ##22	ENSGT00950000183163.a.a.bb ##23	ENSGT00390000010118.c.a.b	ENSGT00390000004808.f ##27	ENSGT00510000048364	ENSGT00560000078630	ENSGT00950000183008.a.a.a.b	ENSGT00940000160424	ENSGT00940000158242	ENSGT00950000183053.D.b	ENSGT00390000008812.b.a	ENSGT00940000158053.r	ENSGT01100000263475.f.b.b	ENSGT00940000173852	ENSGT00940000164496.a.a.i	ENSGT00950000182978.B
P. kingsleyae	MODERN SPECIES	13	dtnbp1b (ENSPKIG00000002974)	mylipa (ENSPKIG00000002991)	gmpr (ENSPKIG00000003016)	atxn1a (ENSPKIG00000003054)	ENSPKIG00000003088	lim2.4 (ENSPKIG00000003113)	USF2 (ENSPKIG00000003150)	ENSPKIG00000003201	tekt2 (ENSPKIG00000003234)	slc9a1b (ENSPKIG00000003284)	srsf10b (ENSPKIG00000003304)	ENSPKIG00000003346 #9	mycbp (ENSPKIG00000003459) ##12	fhl3b (ENSPKIG00000003480) ##16	stpg1 (ENSPKIG00000003521)	map7d1b (ENSPKIG00000003598) ##22	thrap3b (ENSPKIG00000003697) ##23	LSM10 (ENSPKIG00000003728)	smim13 (ENSPKIG00000003755)	nedd9 (ENSPKIG00000003771)	TMEM170B (ENSPKIG00000003794)	HIVEP1 (ENSPKIG00000003860)	edn1 (ENSPKIG00000003920)	si:dkeyp-92c9.2 (ENSPKIG00000003949)	myo1g (ENSPKIG00000003975)	ENSPKIG00000004118	ENSPKIG00000004298
Osteoglossocephalai	ANCESTRAL SPECIES																	ENSGT00950000182941.a.a.b.f ##22
Clupeocephala	ANCESTRAL SPECIES																	ENSGT00950000182941.a.a.b.f ##22
Euteleosteomorpha	ANCESTRAL SPECIES																	ENSGT00950000182941.a.a.b.f ##22
Protacanthopterygii	ANCESTRAL SPECIES																	ENSGT00950000182941.a.a.b.f ##22
Salmoninae	ANCESTRAL SPECIES																	ENSGT00950000182941.a.a.b.f ##22
Salmoninae_a	ANCESTRAL SPECIES																	ENSGT00950000182941.a.a.b.f ##22
Oncorhynchus	ANCESTRAL SPECIES																	ENSGT00950000182941.a.a.b.f ##22
Rainbow trout	MODERN SPECIES	25	ENSOMYG00000049293	sh3bgrl2 (ENSOMYG00000048234)	ENSOMYG00000066355	ENSOMYG00000069660	eya4 (ENSOMYG00000063960)	tcf21 (ENSOMYG00000075719)	ENSOMYG00000049685	ENSOMYG00000039735	ENSOMYG00000053078	ENSOMYG00000062827	aldh8a1 (ENSOMYG00000025589)	ENSOMYG00000065177	myb (ENSOMYG00000061659)	mtfr2 (ENSOMYG00000028410)	ENSOMYG00000063382	ENSOMYG00000062619 ##22	ENSOMYG00000065195	ENSOMYG00000058349	DDX1 (ENSOMYG00000031111)	nbas (ENSOMYG00000055190)	ENSOMYG00000049178	ENSOMYG00000065531	ENSOMYG00000053131	lratd1 (ENSOMYG00000039116)	sec63 (ENSOMYG00000068521)	ENSOMYG00000061905	ENSOMYG00000077259	ENSOMYG00000026864	ENSOMYG00000071150	ENSOMYG00000031152	ENSOMYG00000067714
Spotted gar	MODERN SPECIES	672	ldlrap1b (ENSLOCG00000002632)	maco1b (ENSLOCG00000002652)	rhd (ENSLOCG00000002671)	tmem50a (ENSLOCG00000002702)	mgst3b (ENSLOCG00000002714)	syf2 (ENSLOCG00000002728)	runx3 (ENSLOCG00000002744)	clic4 (ENSLOCG00000002762)	SRRM1 (ENSLOCG00000002785)	rcan3 (ENSLOCG00000002797)	nipal3 (ENSLOCG00000002817)	ENSLOCG00000002832	ENSLOCG00000002868	stpg1 (ENSLOCG00000002882)	MAP3K6 (ENSLOCG00000002899) #21	map7d1a (ENSLOCG00000002929) #22	ENSLOCG00000002939	sh3d21 (ENSLOCG00000002978) #24	cited4b (ENSLOCG00000018276)	ENSLOCG00000002995	SCMH1 (ENSLOCG00000003009)	foxo6b (ENSLOCG00000003028)	med18 (ENSLOCG00000003042)	ppp1r8a (ENSLOCG00000003050)	THEMIS2 (ENSLOCG00000003069)	rpa2 (ENSLOCG00000003082)	eva1bb (ENSLOCG00000003102) ##25	STK40 (ENSLOCG00000003116) #26	LSM10 (ENSLOCG00000018277)	oscp1a (ENSLOCG00000003127) #27	mrps15 (ENSLOCG00000003165) #29