Euteleostomi ANCESTRAL SPECIES 146 ENSGT00950000182941.a.a.b #22 ENSGT00950000183163.a.a #23 ENSGT00940000160627 #24 ENSGT00940000154096.b.b.b.b.b #25 ENSGT00940000154096.b.b.b.b.a ##25 ENSGT00950000182986.b #26 ENSGT00510000048364 ENSGT00390000004808 #27 ENSGT00940000161202 ENSGT00390000001737 #29 ENSGT00940000158915 #30 ENSGT00940000159465 #31 ENSGT00940000155107.a.a #32 ENSGT00990000203803 #34 ENSGT00390000015257 ENSGT00940000156553 #20 Actinopterygii ANCESTRAL SPECIES 153 ENSGT00940000163282 ENSGT00940000157531 ENSGT00940000159398 #21 ENSGT00950000182941.a.a.b #22 ENSGT00950000183163.a.a #23 ENSGT00940000160627 #24 ENSGT00940000154096.b.b.b.b.b #25 ENSGT00950000182986.b #26 ENSGT00510000048364 ENSGT00390000004808 #27 ENSGT00940000161202 ENSGT01050000244848.B.b ENSGT01050000244848.B.a.b ENSGT00390000001737 #29 ENSGT00940000158915 #30 ENSGT00940000159465 #31 ENSGT00940000155107.a.a #32 ENSGT00990000203803 #34 ENSGT00810000125524 #18 Neopterygii ANCESTRAL SPECIES 56 ENSGT00940000159398 #21 ENSGT00950000182941.a.a.b #22 ENSGT00950000183163.a.a #23 ENSGT00940000160627 #24 ENSGT00940000154096.b.b.b.b.b #25 ENSGT00950000182986.b #26 ENSGT00510000048364 ENSGT00390000004808 #27 ENSGT00940000171263 ENSGT00510000047886.b ENSGT00950000183199.a.b ENSGT00940000163576 ENSGT00940000161202 ENSGT01050000244848.B.b ENSGT01050000244848.B.a.b ENSGT00940000160262 ENSGT00940000162179.e.a.b Osteoglossocephalai DUPLICATION Osteoglossocephalai DUPLICATION Osteoglossocephalai ANCESTRAL SPECIES 4 ENSGT00940000166920 ENSGT00390000003012 #19 ENSGT00940000156553 #20 ENSGT00940000159398 #21 ENSGT00950000182941.a.a.b.e.a #22 ENSGT00950000183163.a.a.ab #23 ENSGT00940000160627 #24 ENSGT00940000154096.b.b.b.b.b #25 ENSGT00950000182986.b #26 ENSGT00390000004808.e #27 ENSGT01030000235168 ENSGT00390000001737 #29 ENSGT00940000158915 #30 ENSGT00940000159465 #31 ENSGT00940000155107.a.a #32 ENSGT00990000203803 #34 ENSGT00810000125524 #18 ENSGT00940000158871 #17 ENSGT00950000183028.a.b.a #16 ENSGT00390000005813 #15 Clupeocephala DUPLICATION Clupeocephala ANCESTRAL SPECIES ENSGT01060000248564.a.b #8 ENSGT00940000158787 #9 ENSGT00940000159442 #10 ENSGT01030000235133 ENSGT01090000260070.C.a #11 ENSGT00390000017974.nb #12 ENSGT00950000183031.A.a.a #13 ENSGT00940000165372 #14 ENSGT00390000005813 #15 ENSGT00950000183028.a.b.a #16 ENSGT00940000158871 #17 ENSGT00810000125524 #18 ENSGT00390000003012 #19 ENSGT00940000156553 #20 ENSGT00940000159398 #21 ENSGT00950000182941.a.a.b.e.a.b #22 ENSGT00950000183163.a.a.ab #23 ENSGT00940000160627 #24 ENSGT00940000154096.b.b.b.b.b #25 ENSGT00950000182986.b #26 ENSGT00390000004808.e #27 ENSGT00390000001737 #29 ENSGT00940000158915 #30 ENSGT00940000159465 #31 ENSGT00940000155107.a.a.a #32 ENSGT00990000203803 #34 ENSGT00940000156762 #35 ENSGT00940000157291 #36 ENSGT00390000015364.b #37 ENSGT00390000016054.b.i ENSGT00940000153295.a.a Euteleosteomorpha ANCESTRAL SPECIES 13 ENSGT01060000248564.a.b #8 ENSGT00940000158787 #9 ENSGT00940000159442 #10 ENSGT01030000235133 ENSGT01090000260070.C.a #11 ENSGT00390000017974.nb #12 ENSGT00950000183031.A.a.a #13 ENSGT00940000165372 #14 ENSGT00390000005813 #15 ENSGT00950000183028.a.b.a #16 ENSGT00940000158871 #17 ENSGT00810000125524 #18 ENSGT00390000003012 #19 ENSGT00940000156553 #20 ENSGT00940000159398 #21 ENSGT00950000182941.a.a.b.e.a.b #22 ENSGT00950000183163.a.a.ab #23 ENSGT00940000160627 #24 ENSGT00940000154096.b.b.b.b.b #25 ENSGT00950000182986.b #26 ENSGT00390000004808.e #27 ENSGT01030000235168 ENSGT00390000001737 #29 ENSGT00940000158915 #30 ENSGT00940000159465 #31 ENSGT00940000155107.a.a.a #32 ENSGT00990000203803 #34 ENSGT00940000156762 #35 ENSGT00940000157291 #36 ENSGT00390000015364.b #37 ENSGT00390000016054.b.i Acanthomorphata ANCESTRAL SPECIES 38 ENSGT00530000063881.a.b #7 ENSGT01060000248564.a.b #8 ENSGT00940000158787 #9 ENSGT00940000159442 #10 ENSGT01090000260070.C.a #11 ENSGT00390000017974.nb #12 ENSGT00950000183031.A.a.a #13 ENSGT00940000165372 #14 ENSGT00390000005813 #15 ENSGT00950000183028.a.b.a #16 ENSGT00940000158871 #17 ENSGT00810000125524 #18 ENSGT00390000003012 #19 ENSGT00940000156553 #20 ENSGT00940000159398 #21 ENSGT00950000182941.a.a.b.e.a.b #22 ENSGT00950000183163.a.a.ab #23 ENSGT00940000160627 #24 ENSGT00940000154096.b.b.b.b.b #25 ENSGT00950000182986.b #26 ENSGT00390000004808.e #27 ENSGT01100000263479.H.c.b ENSGT01100000263479.H.c.a.a ENSGT01100000263479.G ENSGT00950000183199.a.b ENSGT00940000177028 ENSGT00940000163576 ENSGT00940000161202 ENSGT00390000001737 #29 ENSGT00940000158915 #30 ENSGT00940000159465 #31 Euacanthomorphacea ANCESTRAL SPECIES ENSGT00530000063881.a.b #7 ENSGT01060000248564.a.b #8 ENSGT00940000158787 #9 ENSGT00940000159442 #10 ENSGT01090000260070.C.a #11 ENSGT00390000017974.nb #12 ENSGT00950000183031.A.a.a #13 ENSGT00940000165372 #14 ENSGT00390000005813 #15 ENSGT00950000183028.a.b.a #16 ENSGT00940000158871 #17 ENSGT00810000125524 #18 ENSGT00390000003012 #19 ENSGT00940000156553 #20 ENSGT00940000159398 #21 ENSGT00950000182941.a.a.b.e.a.b #22 ENSGT00950000183163.a.a.ab #23 ENSGT00940000160627 #24 ENSGT00940000154096.b.b.b.b.b #25 ENSGT00950000182986.b #26 ENSGT00390000004808.e #27 ENSGT00940000166129 #28 ENSGT00390000001737 #29 ENSGT00940000158915 #30 ENSGT00940000159465 #31 ENSGT00940000155107.a.a.a #32 ENSGT00990000203803 #34 ENSGT00940000156762 #35 ENSGT00940000157291 #36 ENSGT00390000015364.b #37 ENSGT00390000016054.b.i Percomorphaceae ANCESTRAL SPECIES ENSGT00530000063881.a.b #7 ENSGT01060000248564.a.b #8 ENSGT00940000158787 #9 ENSGT00940000159442 #10 ENSGT01090000260070.C.a #11 ENSGT00390000017974.nb #12 ENSGT00950000183031.A.a.a #13 ENSGT00940000165372 #14 ENSGT00390000005813 #15 ENSGT00950000183028.a.b.a #16 ENSGT00940000158871 #17 ENSGT00810000125524 #18 ENSGT00390000003012 #19 ENSGT00940000156553 #20 ENSGT00940000159398 #21 ENSGT00950000182941.a.a.b.e.a.b #22 ENSGT00950000183163.a.a.ab #23 ENSGT00940000160627 #24 ENSGT00940000154096.b.b.b.b.b #25 ENSGT00950000182986.b #26 ENSGT00390000004808.e #27 ENSGT00940000166129 #28 ENSGT00390000001737 #29 ENSGT00940000158915 #30 ENSGT00940000159465 #31 ENSGT00940000155107.a.a.a #32 ENSGT00990000203803 #34 ENSGT00940000156762 #35 ENSGT00940000157291 #36 ENSGT00390000015364.b #37 ENSGT00390000016054.b.i Percomorphaceae_B ANCESTRAL SPECIES 1 ENSGT00530000063881.a.b #7 ENSGT01060000248564.a.b #8 ENSGT00940000158787 #9 ENSGT00940000159442 #10 ENSGT01090000260070.C.a #11 ENSGT00390000017974.nb #12 ENSGT00950000183031.A.a.a #13 ENSGT00940000165372 #14 ENSGT00390000005813 #15 ENSGT00950000183028.a.b.a #16 ENSGT00940000158871 #17 ENSGT00810000125524 #18 ENSGT00390000003012 #19 ENSGT00940000156553 #20 ENSGT00940000159398 #21 ENSGT00950000182941.a.a.b.e.a.b #22 ENSGT00950000183163.a.a.ab #23 ENSGT00940000160627 #24 ENSGT00940000154096.b.b.b.b.b #25 ENSGT00950000182986.b #26 ENSGT00390000004808.e #27 ENSGT00940000166129 #28 ENSGT00390000001737 #29 ENSGT00940000158915 #30 ENSGT00530000068429 ENSGT00940000159465 #31 ENSGT00940000155107.a.a.a #32 ENSGT00990000204035 #33 ENSGT00940000156762 #35 ENSGT00940000157291 #36 ENSGT00390000015364.b #37 Percomorphaceae_C ANCESTRAL SPECIES 2 ENSGT00530000063881.a.b #7 ENSGT01060000248564.a.b #8 ENSGT00940000158787 #9 ENSGT00940000159442 #10 ENSGT01090000260070.C.a #11 ENSGT00390000017974.nb #12 ENSGT00950000183031.A.a.a #13 ENSGT00940000165372 #14 ENSGT00390000005813 #15 ENSGT00950000183028.a.b.a #16 ENSGT00940000158871 #17 ENSGT00810000125524 #18 ENSGT00390000003012 #19 ENSGT00940000156553 #20 ENSGT00940000159398 #21 ENSGT00950000182941.a.a.b.e.a.b #22 ENSGT00950000183163.a.a.ab #23 ENSGT00940000160627 #24 ENSGT00940000154096.b.b.b.b.b #25 ENSGT00950000182986.b #26 ENSGT00390000004808.e #27 ENSGT00940000166129 #28 ENSGT00390000001737 #29 ENSGT00940000158915 #30 ENSGT00530000068429 ENSGT00940000159465 #31 ENSGT00940000155107.a.a.a #32 ENSGT00990000204035 #33 ENSGT00940000156762 #35 ENSGT00940000157291 #36 ENSGT00390000015364.b #37 Percomorphaceae_D ANCESTRAL SPECIES 2 ENSGT00530000063881.a.b #7 ENSGT01060000248564.a.b #8 ENSGT00940000158787 #9 ENSGT00940000159442 #10 ENSGT01090000260070.C.a #11 ENSGT00390000017974.nb #12 ENSGT00950000183031.A.a.a #13 ENSGT00940000165372 #14 ENSGT00390000005813 #15 ENSGT00950000183028.a.b.a #16 ENSGT00940000158871 #17 ENSGT00810000125524 #18 ENSGT00390000003012 #19 ENSGT00940000156553 #20 ENSGT00940000159398 #21 ENSGT00950000182941.a.a.b.e.a.b #22 ENSGT00950000183163.a.a.ab #23 ENSGT00940000160627 #24 ENSGT00940000154096.b.b.b.b.b #25 ENSGT00950000182986.b #26 ENSGT00390000004808.e #27 ENSGT00940000166129 #28 ENSGT00390000001737 #29 ENSGT00940000158915 #30 ENSGT00940000159465 #31 ENSGT00940000155107.a.a.a #32 ENSGT00990000204035 #33 ENSGT00990000203803 #34 ENSGT00940000156762 #35 ENSGT00940000157291 #36 ENSGT00390000015364.b #37 Anabantaria ANCESTRAL SPECIES 2 ENSGT00940000160519.a.a ENSGT00530000063881.a.b #7 ENSGT01060000248564.a.b #8 ENSGT00940000158787 #9 ENSGT00940000159442 #10 ENSGT01090000260070.C.a #11 ENSGT00390000017974.nb #12 ENSGT00940000165372 #14 ENSGT00390000005813 #15 ENSGT00950000183028.a.b.a #16 ENSGT00940000158871 #17 ENSGT00810000125524 #18 ENSGT00390000003012 #19 ENSGT00940000156553 #20 ENSGT00940000159398 #21 ENSGT00950000182941.a.a.b.e.a.b #22 ENSGT00950000183163.a.a.ab #23 ENSGT00940000160627 #24 ENSGT00940000154096.b.b.b.b.b #25 ENSGT00950000182986.b #26 ENSGT00390000004808.e #27 ENSGT00940000166129 #28 ENSGT00390000001737 #29 ENSGT00940000158915.u #30 ENSGT00940000159465 #31 ENSGT00940000155107.a.a.a #32 ENSGT00990000204035 #33 ENSGT00940000156762 #35 ENSGT00940000157291 #36 ENSGT00390000015364.b #37 ENSGT00390000016054.b.i Anabantoidei ANCESTRAL SPECIES 3 ENSGT00940000160519.a.a ENSGT00530000063881.a.b #7 ENSGT01060000248564.a.b #8 ENSGT00940000158787 #9 ENSGT00940000159442 #10 ENSGT01090000260070.C.a #11 ENSGT00390000017974.nb #12 ENSGT00950000183031.A.a.a #13 ENSGT00390000005813 #15 ENSGT00950000183028.a.b.a #16 ENSGT00940000158871 #17 ENSGT00810000125524 #18 ENSGT00390000003012 #19 ENSGT00940000156553 #20 ENSGT00940000159398 #21 ENSGT00950000182941.a.a.b.e.a.b #22 ENSGT00950000183163.a.a.ab #23 ENSGT00940000160627 #24 ENSGT00940000154096.b.b.b.b.b #25 ENSGT00950000182986.b #26 ENSGT00390000004808.e #27 ENSGT00940000166129 #28 ENSGT00390000001737 #29 ENSGT00940000158915.u #30 ENSGT00940000159465 #31 ENSGT00940000155107.a.a.a #32 ENSGT00990000204035 #33 ENSGT00940000156762 #35 ENSGT00940000157291 #36 ENSGT00390000015364.b #37 ENSGT00390000016054.b.i Siamese fighting fish MODERN SPECIES 7 SRSF10 (ENSBSLG00000020961) pnrc2 (ENSBSLG00000020985) #7 cnr2 (ENSBSLG00000021011) #8 akirin1 (ENSBSLG00000021034) #9 rhbdl2 (ENSBSLG00000021070) #10 GJA9 (ENSBSLG00000021090) #11 MYCBP (ENSBSLG00000021126) #12 rragca (ENSBSLG00000021174) #13 utp11 (ENSBSLG00000021215) #15 FHL3 (ENSBSLG00000021242) #16 rspo1 (ENSBSLG00000021269) #17 gnl2 (ENSBSLG00000021296) #18 dnali1 (ENSBSLG00000021397) #19 SNIP1 (ENSBSLG00000021403) #20 ENSBSLG00000021441 #21 MAP7D1 (ENSBSLG00000021885) #22 THRAP3 (ENSBSLG00000021912) #23 sh3d21 (ENSBSLG00000021927) #24 eva1ba (ENSBSLG00000021956) #25 STK40 (ENSBSLG00000021978) #26 OSCP1 (ENSBSLG00000022030) #27 ENSBSLG00000022016 mrps15 (ENSBSLG00000022038) #29 csf3r (ENSBSLG00000022045) #30 GRIK3 (ENSBSLG00000022127) #31 ENSBSLG00000022266 ZC3H12A (ENSBSLG00000022267) #32 ENSBSLG00000022271 #33 INPP5B (ENSBSLG00000022431) #35 mtf1 (ENSBSLG00000022933) #36 yrdc (ENSBSLG00000022987) #37 Zig-zag eel MODERN SPECIES 7 ENSMAMG00000008128 ENSMAMG00000008111 pnrc2 (ENSMAMG00000008081) #7 cnr2 (ENSMAMG00000008073) #8 akirin1 (ENSMAMG00000008054) #9 rhbdl2 (ENSMAMG00000026530) #10 ENSMAMG00000008023 #12 rragca (ENSMAMG00000007964) #13 pou3f1 (ENSMAMG00000007950) #14 utp11 (ENSMAMG00000007927) #15 FHL3 (ENSMAMG00000007894) #16 rspo1 (ENSMAMG00000007882) #17 gnl2 (ENSMAMG00000007823) #18 dnali1 (ENSMAMG00000027064) #19 ENSMAMG00000007781 #21 MAP7D1 (ENSMAMG00000007741) #22 THRAP3 (ENSMAMG00000007707) #23 sh3d21 (ENSMAMG00000007666) #24 eva1ba (ENSMAMG00000007649) #25 STK40 (ENSMAMG00000007611) #26 OSCP1 (ENSMAMG00000007603) #27 ENSMAMG00000007593 mrps15 (ENSMAMG00000007572) #29 csf3r (ENSMAMG00000007544) #30 GRIK3 (ENSMAMG00000007505) #31 ZC3H12A (ENSMAMG00000007494) #32 INPP5B (ENSMAMG00000007345) #35 mtf1 (ENSMAMG00000007324) #36 yrdc (ENSMAMG00000028078) #37 MANEAL (ENSMAMG00000007300) ENSMAMG00000007271 Carangaria ANCESTRAL SPECIES 1 ENSGT00530000063881.a.b #7 ENSGT01060000248564.a.b #8 ENSGT00940000158787 #9 ENSGT00940000159442 #10 ENSGT01090000260070.C.a #11 ENSGT00390000017974.nb #12 ENSGT00950000183031.A.a.a #13 ENSGT00940000165372 #14 ENSGT00390000005813 #15 ENSGT00950000183028.a.b.a #16 ENSGT00940000158871 #17 ENSGT00810000125524 #18 ENSGT00390000003012 #19 ENSGT00940000156553 #20 ENSGT00940000159398 #21 ENSGT00950000182941.a.a.b.e.a.b #22 ENSGT00950000183163.a.a.ab #23 ENSGT00940000160627 #24 ENSGT00940000154096.b.b.b.b.b #25 ENSGT00950000182986.b #26 ENSGT00390000004808.e #27 ENSGT00940000166129 #28 ENSGT00390000001737 #29 ENSGT00940000158915 #30 ENSGT00940000159465 #31 ENSGT00940000155107.a.a.a #32 ENSGT00990000203803 #34 ENSGT00940000156762 #35 ENSGT00940000157291 #36 ENSGT00390000015364.b #37 ENSGT00390000016054.b.i Carangaria_A ANCESTRAL SPECIES 27 ENSGT00530000063881.a.b #7 ENSGT01060000248564.a.b #8 ENSGT00940000158787 #9 ENSGT00940000159442 #10 ENSGT01090000260070.C.a #11 ENSGT00390000017974.nb #12 ENSGT00950000183031.A.a.a #13 ENSGT00940000165372 #14 ENSGT00390000005813 #15 ENSGT00950000183028.a.b.a #16 ENSGT00940000158871 #17 ENSGT00810000125524 #18 ENSGT00390000003012 #19 ENSGT00940000156553 #20 ENSGT00940000159398 #21 ENSGT00950000182941.a.a.b.e.a.b #22 ENSGT00950000183163.a.a.ab #23 ENSGT00940000160627 #24 ENSGT00940000154096.b.b.b.b.b #25 ENSGT00950000182986.b #26 ENSGT00390000004808.e #27 ENSGT00940000166129 #28 ENSGT00390000001737 #29 ENSGT00940000158915 #30 ENSGT00940000159465 #31 ENSGT00940000155107.a.a.a #32 ENSGT00990000203803 #34 ENSGT00940000156762 #35 ENSGT00940000157291 #36 ENSGT00390000015364.b #37 ENSGT00390000016054.b.i Barramundi perch MODERN SPECIES 104 pnrc2 (ENSLCAG00010003408) #7 cnr2 (ENSLCAG00010003413) #8 akirin1 (ENSLCAG00010003420) #9 rhbdl2 (ENSLCAG00010003426) #10 GJA9 (ENSLCAG00010003430) #11 ENSLCAG00010003436 #12 rragca (ENSLCAG00010003445) #13 pou3f1 (ENSLCAG00010003450) #14 utp11 (ENSLCAG00010003455) #15 FHL3 (ENSLCAG00010003463) #16 rspo1 (ENSLCAG00010003470) #17 gnl2 (ENSLCAG00010003490) #18 dnali1 (ENSLCAG00010003510) #19 snip1 (ENSLCAG00010003515) ENSLCAG00010003538 #21 MAP7D1 (ENSLCAG00010003586) #22 THRAP3 (ENSLCAG00010003595) #23 sh3d21 (ENSLCAG00010003598) #24 eva1ba (ENSLCAG00010003602) #25 STK40 (ENSLCAG00010003605) #26 OSCP1 (ENSLCAG00010003615) #27 ENSLCAG00010003627 #28 mrps15 (ENSLCAG00010003634) #29 CSF3R (ENSLCAG00010003642) #30 Seriola ANCESTRAL SPECIES 48 ENSGT00530000063881.a.b #7 ENSGT01060000248564.a.b #8 ENSGT00940000158787 #9 ENSGT00940000159442 #10 ENSGT01090000260070.C.a #11 ENSGT00390000017974.nb #12 ENSGT00950000183031.A.a.a #13 ENSGT00940000165372 #14 ENSGT00390000005813 #15 ENSGT00950000183028.a.b.a #16 ENSGT00940000158871 #17 ENSGT00810000125524 #18 ENSGT00390000003012 #19 ENSGT00940000156553 #20 ENSGT00940000159398 #21 ENSGT00950000182941.a.a.b.e.a.b #22 ENSGT00950000183163.a.a.ab #23 ENSGT00940000160627 #24 ENSGT00940000154096.b.b.b.b.b #25 ENSGT00950000182986.b #26 ENSGT00390000004808.e #27 ENSGT00940000166129 #28 ENSGT00390000001737 #29 ENSGT00940000158915 #30 ENSGT00940000159465 #31 ENSGT00940000155107.a.a.a #32 ENSGT00990000203803 #34 ENSGT00940000156762 #35 ENSGT00940000157291 #36 ENSGT00390000015364.b #37 ENSGT00390000016054.b.i Greater amberjack MODERN SPECIES 154 pnrc2 (ENSSDUG00000010643) #7 cnr2 (ENSSDUG00000010638) #8 akirin1 (ENSSDUG00000010616) #9 rhbdl2 (ENSSDUG00000010587) #10 GJA9 (ENSSDUG00000010578) #11 ENSSDUG00000010570 #12 rragca (ENSSDUG00000010543) #13 pou3f1 (ENSSDUG00000010532) #14 utp11 (ENSSDUG00000010501) #15 FHL3 (ENSSDUG00000010483) #16 rspo1 (ENSSDUG00000010472) #17 gnl2 (ENSSDUG00000010382) #18 dnali1 (ENSSDUG00000010345) #19 SNIP1 (ENSSDUG00000010325) #20 MAP3K6 (ENSSDUG00000010287) #21 MAP7D1 (ENSSDUG00000010208) #22 THRAP3 (ENSSDUG00000010132) #23 sh3d21 (ENSSDUG00000010098) #24 eva1ba (ENSSDUG00000010078) #25 STK40 (ENSSDUG00000010024) #26 OSCP1 (ENSSDUG00000009984) #27 ENSSDUG00000009969 #28 mrps15 (ENSSDUG00000009946) #29 csf3r (ENSSDUG00000009924) #30 GRIK3 (ENSSDUG00000009891) #31 ZC3H12A (ENSSDUG00000009879) #32 ENSSDUG00000009859 #34 INPP5B (ENSSDUG00000009812) #35 mtf1 (ENSSDUG00000009784) #36 yrdc (ENSSDUG00000009775) #37 MANEAL (ENSSDUG00000009753) Pleuronectoidei ANCESTRAL SPECIES 3 ENSGT00940000154450.uc ENSGT00530000063881.a.b #7 ENSGT01060000248564.a.b #8 ENSGT00940000158787 #9 ENSGT00940000159442 #10 ENSGT01090000260070.C.a #11 ENSGT00390000017974.nb #12 ENSGT00940000165372 #14 ENSGT00390000005813 #15 ENSGT00950000183028.a.b.a #16 ENSGT00940000158871 #17 ENSGT00810000125524 #18 ENSGT00390000003012 #19 ENSGT00940000156553 #20 ENSGT00940000159398 #21 ENSGT00950000182941.a.a.b.e.a.b #22 ENSGT00950000183163.a.a.ab #23 ENSGT00940000160627 #24 ENSGT00940000154096.b.b.b.b.b #25 ENSGT00950000182986.b #26 ENSGT00390000004808.e #27 ENSGT01030000235168 ENSGT00390000001737 #29 ENSGT00940000158915 #30 ENSGT00940000159465 #31 ENSGT00940000155107.a.a.a #32 ENSGT00940000178211 ENSGT00940000156762 #35 ENSGT00940000157291 #36 ENSGT00390000015364.b #37 ENSGT00390000016054.b.i Tongue sole MODERN SPECIES 4 pnrc2 (ENSCSEG00000020261) #7 cnr2 (ENSCSEG00000020263) #8 akirin1 (ENSCSEG00000020264) #9 rhbdl2 (ENSCSEG00000020266) #10 GJA9 (ENSCSEG00000020269) #11 ENSCSEG00000020270 rragca (ENSCSEG00000020277) #13 pou3f1 (ENSCSEG00000020279) #14 utp11 (ENSCSEG00000020281) #15 FHL3 (ENSCSEG00000020285) #16 rspo1 (ENSCSEG00000020287) #17 gnl2 (ENSCSEG00000020296) #18 dnali1 (ENSCSEG00000020307) #19 snip1 (ENSCSEG00000020310) ENSCSEG00000020313 #21 MAP7D1 (ENSCSEG00000020319) #22 ENSCSEG00000020325 #23 sh3d21 (ENSCSEG00000020331) #24 ENSCSEG00000020336 ENSCSEG00000020343 selenbp1 (ENSCSEG00000020362) pogzb (ENSCSEG00000020370) ENSCSEG00000020374 plekho1b (ENSCSEG00000020399) ENSCSEG00000020402 ENSCSEG00000020409 ENSCSEG00000020416 ENSCSEG00000020420 iqgap3 (ENSCSEG00000020426) ANKRD34A (ENSCSEG00000020436) gon4lb (ENSCSEG00000020441) Turbot MODERN SPECIES cnr2 (ENSSMAG00000003186) #8 akirin1 (ENSSMAG00000003202) #9 rhbdl2 (ENSSMAG00000003252) #10 GJA9 (ENSSMAG00000003266) #11 ENSSMAG00000003287 #12 rragca (ENSSMAG00000003327) #13 pou3f1 (ENSSMAG00000003341) #14 ENSSMAG00000035984 utp11 (ENSSMAG00000003346) #15 FHL3 (ENSSMAG00000027104) #16 rspo1 (ENSSMAG00000003444) #17 gnl2 (ENSSMAG00000003472) #18 dnali1 (ENSSMAG00000003563) #19 SNIP1 (ENSSMAG00000003570) #20 ENSSMAG00000003583 #21 MAP7D1 (ENSSMAG00000003648) #22 THRAP3 (ENSSMAG00000003703) #23 sh3d21 (ENSSMAG00000003747) #24 eva1ba (ENSSMAG00000023907) #25 STK40 (ENSSMAG00000003802) #26 OSCP1 (ENSSMAG00000003827) #27 ENSSMAG00000003843 mrps15 (ENSSMAG00000003899) #29 csf3r (ENSSMAG00000003925) #30 GRIK3 (ENSSMAG00000005100) #31 ZC3H12A (ENSSMAG00000005140) #32 INPP5B (ENSSMAG00000005147) #35 mtf1 (ENSSMAG00000005172) #36 yrdc (ENSSMAG00000005195) #37 MANEAL (ENSSMAG00000005209) ENSSMAG00000005221 Eupercaria ANCESTRAL SPECIES 1 ENSGT01060000248564.a.b #8 ENSGT00940000158787 #9 ENSGT00940000159442 #10 ENSGT01030000235133 ENSGT01090000260070.C.a #11 ENSGT00390000017974.nb #12 ENSGT00950000183031.A.a.a #13 ENSGT00940000165372 #14 ENSGT00390000005813 #15 ENSGT00950000183028.a.b.a #16 ENSGT00940000158871 #17 ENSGT00810000125524 #18 ENSGT00390000003012 #19 ENSGT00940000156553 #20 ENSGT00940000159398 #21 ENSGT00950000182941.a.a.b.e.a.b #22 ENSGT00950000183163.a.a.ab #23 ENSGT00940000160627 #24 ENSGT00940000154096.b.b.b.b.b #25 ENSGT00950000182986.b #26 ENSGT00390000004808.e #27 ENSGT00940000166129 #28 ENSGT00390000001737 #29 ENSGT00940000158915 #30 ENSGT00530000068429 ENSGT00940000159465 #31 ENSGT00940000155107.a.a.a #32 ENSGT00990000204035 #33 ENSGT00940000156762 #35 ENSGT00940000157291 #36 ENSGT00390000015364.b #37 Tetraodontidae ANCESTRAL SPECIES 49 ENSGT00940000164147.a ENSGT00530000063881.a.b #7 ENSGT01060000248564.a.b #8 ENSGT00940000158787 #9 ENSGT00940000159442 #10 ENSGT01090000260070.C.a #11 ENSGT00390000017974.nb #12 ENSGT00950000183031.A.a.a #13 ENSGT00940000165372 #14 ENSGT00390000005813 #15 ENSGT00950000183028.a.b.a #16 ENSGT00940000158871 #17 ENSGT00810000125524 #18 ENSGT00390000003012.x.a #19 ENSGT00940000159398 #21 ENSGT00950000182941.a.a.b.e.a.b #22 ENSGT00950000183163.a.a.ab #23 ENSGT00940000160627 #24 ENSGT00940000154096.b.b.b.b.b #25 ENSGT00950000182986.b #26 ENSGT00390000004808.e #27 ENSGT00940000166129 #28 ENSGT00390000001737 #29 ENSGT00940000158915 #30 ENSGT00940000159465 #31 Fugu MODERN SPECIES 19 fabp10a (ENSTRUG00000019589) pnrc2 (ENSTRUG00000022856) #7 cnr2 (ENSTRUG00000008915) #8 akirin1 (ENSTRUG00000024601) #9 rhbdl2 (ENSTRUG00000009100) #10 GJA9 (ENSTRUG00000033096) #11 ENSTRUG00000020122 #12 rragca (ENSTRUG00000009237) #13 pou3f1 (ENSTRUG00000009356) #14 utp11 (ENSTRUG00000009375) #15 FHL3 (ENSTRUG00000009493) #16 rspo1 (ENSTRUG00000009686) #17 gnl2 (ENSTRUG00000009789) #18 dnali1 (ENSTRUG00000010122) #19 ENSTRUG00000010218 #21 MAP7D1 (ENSTRUG00000010556) #22 THRAP3 (ENSTRUG00000010702) #23 sh3d21 (ENSTRUG00000010927) #24 eva1ba (ENSTRUG00000010950) #25 STK40 (ENSTRUG00000010973) #26 OSCP1 (ENSTRUG00000011056) #27 ENSTRUG00000021423 #28 mrps15 (ENSTRUG00000011129) #29 CSF3R (ENSTRUG00000011157) #30 GRIK3 (ENSTRUG00000011437) #31 ENSTRUG00000027138 pbx2 (ENSTRUG00000011925) dnase2 (ENSTRUG00000012127) rgl2 (ENSTRUG00000012178) ENSTRUG00000021243 SYNGAP1 (ENSTRUG00000012329) Tetraodon MODERN SPECIES 26 ENSTNIG00000014963 rad51c (ENSTNIG00000014964) ENSTNIG00000014965 ENSTNIG00000002273 XPO1 (ENSTNIG00000003360) cct4 (ENSTNIG00000003361) pus10 (ENSTNIG00000003362) ENSTNIG00000005303 ENSTNIG00000000317 ENSTNIG00000005304 ENSTNIG00000005305 ENSTNIG00000003614 abcd1 (ENSTNIG00000006189) gnl2 (ENSTNIG00000003733) #18 dnali1 (ENSTNIG00000003732) #19 ENSTNIG00000012195 #22 THRAP3 (ENSTNIG00000012194) #23 sh3d21 (ENSTNIG00000012193) #24 STK40 (ENSTNIG00000012192) #26 OSCP1 (ENSTNIG00000012191) #27 mrps15 (ENSTNIG00000012190) #29 CSF3R (ENSTNIG00000001409) #30 GRIK3 (ENSTNIG00000012189) #31 PIEZO1 (ENSTNIG00000003588) ENSTNIG00000003589 ENSTNIG00000003590 ENSTNIG00000003591 ENSTNIG00000003592 tm9sf2 (ENSTNIG00000003593) SYNGAP1 (ENSTNIG00000010304) smg5 (ENSTNIG00000010303) Eupecaria_A ANCESTRAL SPECIES 2 ENSGT01060000248564.a.b #8 ENSGT00940000158787 #9 ENSGT00940000159442 #10 ENSGT01030000235133 ENSGT01090000260070.C.a #11 ENSGT00390000017974.nb #12 ENSGT00950000183031.A.a.a #13 ENSGT00940000165372 #14 ENSGT00390000005813 #15 ENSGT00950000183028.a.b.a #16 ENSGT00940000158871 #17 ENSGT00810000125524 #18 ENSGT00390000003012 #19 ENSGT00940000156553 #20 ENSGT00940000159398 #21 ENSGT00950000182941.a.a.b.e.a.b #22 ENSGT00950000183163.a.a.ab #23 ENSGT00940000160627 #24 ENSGT00940000154096.b.b.b.b.b #25 ENSGT00950000182986.b #26 ENSGT00390000004808.e #27 ENSGT00940000166129 #28 ENSGT00390000001737 #29 ENSGT00940000158915 #30 ENSGT00530000068429 ENSGT00940000159465 #31 ENSGT00940000155107.a.a.a #32 ENSGT00990000204035 #33 ENSGT00940000156762 #35 ENSGT00940000157291 #36 ENSGT00390000015364.b #37 Ballan wrasse MODERN SPECIES 58 akirin1 (ENSLBEG00000008199) #9 rhbdl2 (ENSLBEG00000008248) #10 ENSLBEG00000008283 GJA9 (ENSLBEG00000008301) #11 ENSLBEG00000008336 rragca (ENSLBEG00000008360) #13 pou3f1 (ENSLBEG00000008388) #14 utp11 (ENSLBEG00000008407) #15 FHL3 (ENSLBEG00000008447) #16 rspo1 (ENSLBEG00000008477) #17 gnl2 (ENSLBEG00000008518) #18 dnali1 (ENSLBEG00000008589) #19 ENSLBEG00000008632 ENSLBEG00000008644 #21 ENSLBEG00000008678 #21 MAP7D1 (ENSLBEG00000008723) #22 THRAP3 (ENSLBEG00000008813) #23 sh3d21 (ENSLBEG00000008879) #24 eva1ba (ENSLBEG00000008911) #25 ENSLBEG00000008935 STK40 (ENSLBEG00000008958) #26 OSCP1 (ENSLBEG00000009007) #27 ENSLBEG00000009056 #28 mrps15 (ENSLBEG00000009087) #29 CSF3R (ENSLBEG00000009161) #30 GRIK3 (ENSLBEG00000009256) #31 Eupecaria_B ANCESTRAL SPECIES 4 ENSGT00530000063881.a.b #7 ENSGT01060000248564.a.b #8 ENSGT00940000158787 #9 ENSGT00940000159442 #10 ENSGT01090000260070.C.a #11 ENSGT00390000017974.nb #12 ENSGT00950000183031.A.a.a #13 ENSGT00940000165372 #14 ENSGT00390000005813 #15 ENSGT00950000183028.a.b.a #16 ENSGT00940000158871 #17 ENSGT00810000125524 #18 ENSGT00390000003012 #19 ENSGT00940000156553 #20 ENSGT00940000159398 #21 ENSGT00950000182941.a.a.b.e.a.b #22 ENSGT00950000183163.a.a.ab #23 ENSGT00940000160627 #24 ENSGT00940000154096.b.b.b.b.b #25 ENSGT00950000182986.b #26 ENSGT00390000004808.e #27 ENSGT00940000166129 #28 ENSGT00390000001737 #29 ENSGT00940000158915 #30 ENSGT00530000068429 ENSGT00940000159465 #31 ENSGT00940000155107.a.a.a #32 ENSGT00990000204035 #33 ENSGT00940000156762 #35 ENSGT00940000157291 #36 ENSGT00390000015364.b #37 Eupecaria_C ANCESTRAL SPECIES 2 ENSGT00940000154450.uc ENSGT00530000063881.a.b #7 ENSGT01060000248564.a.b #8 ENSGT00940000158787 #9 ENSGT00940000159442 #10 ENSGT01090000260070.C.a #11 ENSGT00390000017974.nb #12 ENSGT00950000183031.A.a.a #13 ENSGT00940000165372 #14 ENSGT00390000005813 #15 ENSGT00950000183028.a.b.a #16 ENSGT00940000158871 #17 ENSGT00810000125524 #18 ENSGT00390000003012 #19 ENSGT00940000159398 #21 ENSGT00950000182941.a.a.b.e.a.b #22 ENSGT00950000183163.a.a.ab #23 ENSGT00940000160627 #24 ENSGT00940000154096.b.b.b.b.b #25 ENSGT00950000182986.b #26 ENSGT00390000004808.e #27 ENSGT00940000166129 #28 ENSGT00390000001737 #29 ENSGT00940000158915 #30 ENSGT00940000159465 #31 ENSGT00940000155107.a.a.a #32 ENSGT00990000204035 #33 ENSGT00940000156762 #35 ENSGT00940000157291 #36 ENSGT00390000015364.b #37 ENSGT00390000016054.b.i Gilthead seabream MODERN SPECIES 8 pnrc2 (ENSSAUG00010015052) #7 cnr2 (ENSSAUG00010015051) #8 akirin1 (ENSSAUG00010015045) #9 rhbdl2 (ENSSAUG00010015042) #10 GJA9 (ENSSAUG00010015040) #11 ENSSAUG00010015039 #12 rragca (ENSSAUG00010015034) #13 pou3f1 (ENSSAUG00010015032) #14 utp11 (ENSSAUG00010015030) #15 FHL3 (ENSSAUG00010015024) #16 rspo1 (ENSSAUG00010015022) #17 gnl2 (ENSSAUG00010015013) #18 dnali1 (ENSSAUG00010015007) #19 snip1 (ENSSAUG00010015005) MAP3K6 (ENSSAUG00010020734) #21 MAP7D1 (ENSSAUG00010020726) #22 THRAP3 (ENSSAUG00010020723) #23 sh3d21 (ENSSAUG00010020721) #24 eva1ba (ENSSAUG00010020720) #25 STK40 (ENSSAUG00010020718) #26 OSCP1 (ENSSAUG00010020717) #27 ENSSAUG00010020716 #28 mrps15 (ENSSAUG00010020715) #29 csf3r (ENSSAUG00010020713) #30 GRIK3 (ENSSAUG00010017988) #31 ZC3H12A (ENSSAUG00010017948) #32 ENSSAUG00010017943 #33 INPP5B (ENSSAUG00010017637) #35 mtf1 (ENSSAUG00010017599) #36 yrdc (ENSSAUG00010017597) #37 MANEAL (ENSSAUG00010017595) Eupercaria_incertae_sedis ANCESTRAL SPECIES 2 ENSGT00940000164147.a ENSGT00940000154450.uc ENSGT00530000063881.a.b #7 ENSGT01060000248564.a.b #8 ENSGT00940000158787 #9 ENSGT00940000159442 #10 ENSGT01090000260070.C.a #11 ENSGT00390000017974.nb #12 ENSGT00940000165372 #14 ENSGT00390000005813 #15 ENSGT00950000183028.a.b.a #16 ENSGT00940000158871 #17 ENSGT00810000125524 #18 ENSGT00390000003012 #19 ENSGT00940000159398 #21 ENSGT00950000182941.a.a.b.e.a.b #22 ENSGT00950000183163.a.a.ab #23 ENSGT00940000160627 #24 ENSGT00940000154096.b.b.b.b.b #25 ENSGT00950000182986.b #26 ENSGT00390000004808.e #27 ENSGT00390000001737 #29 ENSGT00940000158915 #30 ENSGT00940000159465 #31 ENSGT00940000155107.a.a.a #32 ENSGT00990000204035 #33 ENSGT00940000156762 #35 ENSGT00940000157291 #36 ENSGT00390000015364.b #37 ENSGT00390000016054.b.i ENSGT00940000153295.a.a European seabass MODERN SPECIES 6 pnrc2 (ENSDLAG00005027869) #7 ENSDLAG00005007393 SRSF10 (ENSDLAG00005029184) cnr2 (ENSDLAG00005033223) #8 rhbdl2 (ENSDLAG00005007466) #10 GJA9 (ENSDLAG00005007475) #11 ENSDLAG00005029266 #12 rragca (ENSDLAG00005007481) #13 pou3f1 (ENSDLAG00005029296) #14 utp11 (ENSDLAG00005007490) #15 FHL3 (ENSDLAG00005007500) #16 rspo1 (ENSDLAG00005007510) #17 gnl2 (ENSDLAG00005007540) #18 dnali1 (ENSDLAG00005034656) #19 ENSDLAG00005008475 #21 MAP7D1 (ENSDLAG00005009499) #22 THRAP3 (ENSDLAG00005009555) #23 sh3d21 (ENSDLAG00005009583) #24 eva1ba (ENSDLAG00005029823) #25 STK40 (ENSDLAG00005009633) #26 OSCP1 (ENSDLAG00005009654) #27 mrps15 (ENSDLAG00005030986) #29 csf3r (ENSDLAG00005009735) #30 GRIK3 (ENSDLAG00005009845) #31 ZC3H12A (ENSDLAG00005011869) #32 ENSDLAG00005032500 #33 INPP5B (ENSDLAG00005011892) #35 mtf1 (ENSDLAG00005012917) #36 MANEAL (ENSDLAG00005027752) yrdc (ENSDLAG00005013053) #37 ENSDLAG00005034052 Large yellow croaker MODERN SPECIES 484 scn1ba (ENSLCRG00005010222) ENSLCRG00005010153 si:ch211-225p5.8 (ENSLCRG00005010109) KCNE1 (ENSLCRG00005010097) dnajc28 (ENSLCRG00005010096) ENSLCRG00005010093 rragca (ENSLCRG00005010089) #13 pou3f1 (ENSLCRG00005010081) #14 utp11 (ENSLCRG00005010070) #15 FHL3 (ENSLCRG00005010057) #16 rspo1 (ENSLCRG00005010051) #17 gnl2 (ENSLCRG00005010011) #18 dnali1 (ENSLCRG00005009982) #19 snip1 (ENSLCRG00005009965) ENSLCRG00005006336 #21 MAP7D1 (ENSLCRG00005005931) #22 THRAP3 (ENSLCRG00005005916) #23 sh3d21 (ENSLCRG00005005906) #24 eva1ba (ENSLCRG00005005900) #25 STK40 (ENSLCRG00005005869) #26 OSCP1 (ENSLCRG00005005741) #27 ENSLCRG00005005712 mrps15 (ENSLCRG00005005702) #29 csf3r (ENSLCRG00005005672) #30 GRIK3 (ENSLCRG00005005377) #31 ZC3H12A (ENSLCRG00005005327) #32 ENSLCRG00005005318 #33 INPP5B (ENSLCRG00005003620) #35 mtf1 (ENSLCRG00005003083) #36 yrdc (ENSLCRG00005002976) #37 MANEAL (ENSLCRG00005012059) Perciformes ANCESTRAL SPECIES 3 ENSGT00530000063881.a.b #7 ENSGT01060000248564.a.b #8 ENSGT00940000158787 #9 ENSGT00940000159442 #10 ENSGT01090000260070.C.a #11 ENSGT00390000017974.nb #12 ENSGT00950000183031.A.a.a #13 ENSGT00940000165372 #14 ENSGT00390000005813 #15 ENSGT00950000183028.a.b.a #16 ENSGT00940000158871 #17 ENSGT00810000125524 #18 ENSGT00390000003012 #19 ENSGT00940000156553 #20 ENSGT00940000159398 #21 ENSGT00950000182941.a.a.b.e.a.b #22 ENSGT00950000183163.a.a.ab #23 ENSGT00940000160627 #24 ENSGT00940000154096.b.b.b.b.b #25 ENSGT00950000182986.b #26 ENSGT00390000004808.e #27 ENSGT00940000166129 #28 ENSGT00390000001737 #29 ENSGT00940000158915 #30 ENSGT00530000068429 ENSGT00940000159465 #31 ENSGT00940000155107.a.a.a #32 ENSGT00990000204035 #33 ENSGT00940000156762 #35 ENSGT00940000157291 #36 ENSGT00390000015364.b #37 Perciformes_a ANCESTRAL SPECIES 3 ENSGT00940000154450.uc ENSGT00530000063881.a.b #7 ENSGT01060000248564.a.b #8 ENSGT00940000158787 #9 ENSGT00940000159442 #10 ENSGT01090000260070.C.a #11 ENSGT00390000017974.nb #12 ENSGT00940000165372 #14 ENSGT00390000005813 #15 ENSGT00950000183028.a.b.a #16 ENSGT00940000158871 #17 ENSGT00810000125524 #18 ENSGT00390000003012 #19 ENSGT00940000156553 #20 ENSGT00940000159398 #21 ENSGT00950000182941.a.a.b.e.a.b #22 ENSGT00950000183163.a.a.ab #23 ENSGT00940000160627 #24 ENSGT00940000154096.b.b.b.b.b #25 ENSGT00950000182986.b #26 ENSGT00390000004808.e #27 ENSGT00940000166129 #28 ENSGT00390000001737 #29 ENSGT00940000158915 #30 ENSGT00940000159465 #31 ENSGT00940000155107.a.a.a #32 ENSGT00940000156762 #35 ENSGT00940000157291 #36 ENSGT00390000015364.b #37 ENSGT00390000016054.b.i ENSGT00940000153295.a.a Pike perch MODERN SPECIES 116 dnali1 (ENSSLUG00000005235) #19 snip1 (ENSSLUG00000005225) MAP3K6 (ENSSLUG00000003332) #21 MAP7D1 (ENSSLUG00000002922) #22 THRAP3 (ENSSLUG00000002906) #23 sh3d21 (ENSSLUG00000002896) #24 eva1ba (ENSSLUG00000002889) #25 STK40 (ENSSLUG00000002877) #26 OSCP1 (ENSSLUG00000002865) #27 ENSSLUG00000002857 #28 mrps15 (ENSSLUG00000023350) #29 csf3r (ENSSLUG00000023341) #30 GRIK3 (ENSSLUG00000023219) #31 ENSSLUG00000023196 ZC3H12A (ENSSLUG00000023191) #32 ENSSLUG00000023188 INPP5B (ENSSLUG00000021701) #35 mtf1 (ENSSLUG00000021588) #36 yrdc (ENSSLUG00000021583) #37 Cottioidei ANCESTRAL SPECIES 7 ENSGT00940000154450.uc ENSGT00530000063881.a.b #7 ENSGT01060000248564.a.b #8 ENSGT00940000158787 #9 ENSGT00940000159442 #10 ENSGT01090000260070.C.a #11 ENSGT00390000017974.nb #12 ENSGT00950000183031.A.a.a #13 ENSGT00940000165372 #14 ENSGT00390000005813 #15 ENSGT00950000183028.a.b.a #16 ENSGT00940000158871 #17 ENSGT00810000125524 #18 ENSGT00390000003012 #19 ENSGT00940000159398 #21 ENSGT00950000182941.a.a.b.e.a.b #22 ENSGT00950000183163.a.a.ab #23 ENSGT00940000160627 #24 ENSGT00940000154096.b.b.b.b.b #25 ENSGT00950000182986.b #26 ENSGT00390000004808.e #27 ENSGT00940000166129 #28 ENSGT00390000001737 #29 ENSGT00940000158915 #30 ENSGT00530000068429 ENSGT00940000159465 #31 ENSGT00940000155107.a.a.a #32 ENSGT00990000204035 #33 ENSGT00940000156762 #35 ENSGT00940000157291 #36 ENSGT00390000015364.b #37 Stickleback DUPLICATION Stickleback MODERN SPECIES 19 pnrc2 (ENSGACG00000013653) #7 cnr2 (ENSGACG00000013656) #8 akirin1 (ENSGACG00000013657) #9 rhbdl2 (ENSGACG00000013668) #10 GJA9 (ENSGACG00000013675) #11 ENSGACG00000013676 #12 rragca (ENSGACG00000013678) #13 pou3f1 (ENSGACG00000013679) #14 utp11 (ENSGACG00000013680) #15 FHL3 (ENSGACG00000013685) #16 rspo1 (ENSGACG00000013691) #17 gnl2 (ENSGACG00000013692) #18 dnali1 (ENSGACG00000013717) #19 snip1 (ENSGACG00000013718) MAP3K6 (ENSGACG00000013722) #21 ENSGACG00000013737 #22 ENSGACG00000013740 #22 THRAP3 (ENSGACG00000013745) #23 sh3d21 (ENSGACG00000013749) #24 eva1ba (ENSGACG00000013751) #25 STK40 (ENSGACG00000013752) #26 OSCP1 (ENSGACG00000013774) #27 mrps15 (ENSGACG00000013792) #29 csf3r (ENSGACG00000013795) #30 ENSGACG00000013798 GRIK3 (ENSGACG00000013802) #31 ZC3H12A (ENSGACG00000013859) #32 ENSGACG00000013863 #33 INPP5B (ENSGACG00000013866) #35 mtf1 (ENSGACG00000013875) #36 yrdc (ENSGACG00000013878) #37 Stickleback MODERN SPECIES 19 cnr2 (ENSGACG00000013656) #8 akirin1 (ENSGACG00000013657) #9 rhbdl2 (ENSGACG00000013668) #10 GJA9 (ENSGACG00000013675) #11 ENSGACG00000013676 #12 rragca (ENSGACG00000013678) #13 pou3f1 (ENSGACG00000013679) #14 utp11 (ENSGACG00000013680) #15 FHL3 (ENSGACG00000013685) #16 rspo1 (ENSGACG00000013691) #17 gnl2 (ENSGACG00000013692) #18 dnali1 (ENSGACG00000013717) #19 snip1 (ENSGACG00000013718) MAP3K6 (ENSGACG00000013722) #21 ENSGACG00000013737 #22 ENSGACG00000013740 #22 THRAP3 (ENSGACG00000013745) #23 sh3d21 (ENSGACG00000013749) #24 eva1ba (ENSGACG00000013751) #25 STK40 (ENSGACG00000013752) #26 OSCP1 (ENSGACG00000013774) #27 mrps15 (ENSGACG00000013792) #29 csf3r (ENSGACG00000013795) #30 ENSGACG00000013798 GRIK3 (ENSGACG00000013802) #31 ZC3H12A (ENSGACG00000013859) #32 ENSGACG00000013863 #33 INPP5B (ENSGACG00000013866) #35 mtf1 (ENSGACG00000013875) #36 yrdc (ENSGACG00000013878) #37 ENSGACG00000013885 Lumpfish MODERN SPECIES 7 pnrc2 (ENSCLMG00005009430) #7 cnr2 (ENSCLMG00005009429) #8 akirin1 (ENSCLMG00005009427) #9 rhbdl2 (ENSCLMG00005009374) #10 GJA9 (ENSCLMG00005009373) #11 ENSCLMG00005009372 #12 rragca (ENSCLMG00005009371) #13 pou3f1 (ENSCLMG00005009370) #14 utp11 (ENSCLMG00005009369) #15 FHL3 (ENSCLMG00005009368) #16 rspo1 (ENSCLMG00005009363) #17 gnl2 (ENSCLMG00005009359) #18 dnali1 (ENSCLMG00005009357) #19 snip1 (ENSCLMG00005009356) MAP3K6 (ENSCLMG00005009166) #21 MAP7D1 (ENSCLMG00005009165) #22 THRAP3 (ENSCLMG00005009163) #23 sh3d21 (ENSCLMG00005009162) #24 eva1ba (ENSCLMG00005009161) #25 STK40 (ENSCLMG00005009160) #26 OSCP1 (ENSCLMG00005009149) #27 ENSCLMG00005009147 #28 mrps15 (ENSCLMG00005009146) #29 csf3r (ENSCLMG00005009144) #30 GRIK3 (ENSCLMG00005008787) #31 ZC3H12A (ENSCLMG00005008781) #32 INPP5B (ENSCLMG00005007032) #35 mtf1 (ENSCLMG00005007022) #36 yrdc (ENSCLMG00005007021) #37 MANEAL (ENSCLMG00005007019) LIN28A (ENSCLMG00005007018) Ovalentaria ANCESTRAL SPECIES 3 ENSGT00530000063881.a.b #7 ENSGT01060000248564.a.b #8 ENSGT00940000158787 #9 ENSGT00940000159442 #10 ENSGT01090000260070.C.a #11 ENSGT00390000017974.nb #12 ENSGT00950000183031.A.a.a #13 ENSGT00940000165372 #14 ENSGT00390000005813 #15 ENSGT00950000183028.a.b.a #16 ENSGT00940000158871 #17 ENSGT00810000125524 #18 ENSGT00390000003012 #19 ENSGT00940000156553 #20 ENSGT00940000159398 #21 ENSGT00950000182941.a.a.b.e.a.b #22 ENSGT00950000183163.a.a.ab #23 ENSGT00940000160627 #24 ENSGT00940000154096.b.b.b.b.b #25 ENSGT00950000182986.b #26 ENSGT00390000004808.e #27 ENSGT00940000166129 #28 ENSGT00390000001737 #29 ENSGT00940000158915 #30 ENSGT00530000068429 ENSGT00940000159465 #31 ENSGT00940000155107.a.a.a #32 ENSGT00990000204035 #33 ENSGT00600000085609 ENSGT00990000203803 #34 ENSGT00940000156762 #35 Ovalentaria_B ANCESTRAL SPECIES 1 ENSGT00530000063881.a.b #7 ENSGT01060000248564.a.b #8 ENSGT00940000158787 #9 ENSGT00940000159442 #10 ENSGT01090000260070.C.a #11 ENSGT00390000017974.nb #12 ENSGT00950000183031.A.a.a #13 ENSGT00940000165372 #14 ENSGT00390000005813 #15 ENSGT00950000183028.a.b.a #16 ENSGT00940000158871 #17 ENSGT00810000125524 #18 ENSGT00390000003012 #19 ENSGT00940000156553 #20 ENSGT00940000159398 #21 ENSGT00950000182941.a.a.b.e.a.b #22 ENSGT00950000183163.a.a.ab #23 ENSGT00940000160627 #24 ENSGT00940000154096.b.b.b.b.b #25 ENSGT00950000182986.b #26 ENSGT00390000004808.e #27 ENSGT00940000166129 #28 ENSGT00390000001737 #29 ENSGT00940000158915 #30 ENSGT00940000159465 #31 ENSGT00940000155107.a.a.a #32 ENSGT00990000204035 #33 ENSGT00600000085609 ENSGT00990000203803 #34 ENSGT00940000156762 #35 ENSGT00940000157291 #36 Pomacentridae ANCESTRAL SPECIES 35 ENSGT00530000063881.a.b #7 ENSGT01060000248564.a.b #8 ENSGT00940000158787 #9 ENSGT00940000159442 #10 ENSGT01090000260070.C.a #11 ENSGT00390000017974.nb #12 ENSGT00950000183031.A.a.a #13 ENSGT00940000165372 #14 ENSGT00390000005813 #15 ENSGT00950000183028.a.b.a #16 ENSGT00940000158871 #17 ENSGT00810000125524 #18 ENSGT00390000003012 #19 ENSGT00940000156553.f #20 ENSGT00940000159398 #21 ENSGT00950000182941.a.a.b.e.a.b #22 ENSGT00950000183163.a.a.ab #23 ENSGT00940000160627 #24 ENSGT00940000154096.b.b.b.b.b #25 ENSGT00950000182986.b #26 ENSGT00390000004808.e #27 ENSGT00940000166129 #28 ENSGT00390000001737 #29 ENSGT00940000158915 #30 ENSGT00940000159465 #31 ENSGT00940000155107.a.a.a #32 ENSGT00990000203803 #34 ENSGT00990000204035 #33 ENSGT00940000156762 #35 ENSGT00940000157291 #36 ENSGT00390000015364.b #37 Pomacentridae_A ANCESTRAL SPECIES 16 ENSGT00530000063881.a.b #7 ENSGT01060000248564.a.b #8 ENSGT00940000158787 #9 ENSGT00940000159442 #10 ENSGT01090000260070.C.a #11 ENSGT00390000017974.nb #12 ENSGT00950000183031.A.a.a #13 ENSGT00940000165372 #14 ENSGT00390000005813 #15 ENSGT00950000183028.a.b.a #16 ENSGT00940000158871 #17 ENSGT00810000125524 #18 ENSGT00390000003012 #19 ENSGT00940000156553.f #20 ENSGT00940000159398 #21 ENSGT00950000182941.a.a.b.e.a.b #22 ENSGT00950000183163.a.a.ab #23 ENSGT00940000160627 #24 ENSGT00940000154096.b.b.b.b.b #25 ENSGT00950000182986.b #26 ENSGT00390000004808.e #27 ENSGT00940000166129 #28 ENSGT00390000001737 #29 ENSGT00940000158915 #30 ENSGT00940000159465 #31 ENSGT00940000155107.a.a.a #32 ENSGT00990000204035 #33 ENSGT00940000156762 #35 ENSGT00940000157291 #36 ENSGT00390000015364.b #37 ENSGT00390000016054.b.i Amphiprion ANCESTRAL SPECIES 1 ENSGT00530000063881.a.b #7 ENSGT01060000248564.a.b #8 ENSGT00940000158787 #9 ENSGT00940000159442 #10 ENSGT01090000260070.C.a #11 ENSGT00390000017974.nb #12 ENSGT00950000183031.A.a.a #13 ENSGT00940000165372 #14 ENSGT00390000005813 #15 ENSGT00950000183028.a.b.a #16 ENSGT00940000158871 #17 ENSGT00810000125524 #18 ENSGT00390000003012 #19 ENSGT00940000156553.f #20 ENSGT00940000159398 #21 ENSGT00950000182941.a.a.b.e.a.b #22 ENSGT00950000183163.a.a.ab #23 ENSGT00940000160627 #24 ENSGT00940000154096.b.b.b.b.b #25 ENSGT00950000182986.b #26 ENSGT00390000004808.e #27 ENSGT00940000166129 #28 ENSGT00390000001737 #29 ENSGT00940000158915 #30 ENSGT00940000159465 #31 ENSGT00940000155107.a.a.a #32 ENSGT00990000203803 #34 ENSGT00990000204035 #33 ENSGT00940000156762 #35 ENSGT00940000157291 #36 ENSGT00390000015364.b #37 Clown anemonefish MODERN SPECIES 1296 FHL3 (ENSAOCG00000014316) #16 rspo1 (ENSAOCG00000014341) #17 gnl2 (ENSAOCG00000014396) #18 dnali1 (ENSAOCG00000014444) #19 SNIP1 (ENSAOCG00000014455) #20 MAP3K6 (ENSAOCG00000014625) #21 MAP7D1 (ENSAOCG00000014698) #22 THRAP3 (ENSAOCG00000014738) #23 sh3d21 (ENSAOCG00000000988) #24 eva1ba (ENSAOCG00000014770) #25 STK40 (ENSAOCG00000000999) #26 OSCP1 (ENSAOCG00000001002) #27 ENSAOCG00000001009 #28 mrps15 (ENSAOCG00000014871) #29 csf3r (ENSAOCG00000014880) #30 GRIK3 (ENSAOCG00000002707) #31 ZC3H12A (ENSAOCG00000014937) #32 ENSAOCG00000001847 #34 ENSAOCG00000014980 INPP5B (ENSAOCG00000014998) #35 mtf1 (ENSAOCG00000015058) #36 Orange clownfish MODERN SPECIES 21 pnrc2 (ENSAPEG00000004927) #7 cnr2 (ENSAPEG00000004941) #8 akirin1 (ENSAPEG00000005009) #9 rhbdl2 (ENSAPEG00000005028) #10 GJA9 (ENSAPEG00000005061) #11 MYCBP (ENSAPEG00000005073) #12 rragca (ENSAPEG00000005106) #13 pou3f1 (ENSAPEG00000005174) #14 utp11 (ENSAPEG00000005214) #15 FHL3 (ENSAPEG00000005272) #16 rspo1 (ENSAPEG00000005307) #17 gnl2 (ENSAPEG00000005375) #18 dnali1 (ENSAPEG00000005453) #19 SNIP1 (ENSAPEG00000005542) #20 MAP3K6 (ENSAPEG00000005570) #21 MAP7D1 (ENSAPEG00000005614) #22 THRAP3 (ENSAPEG00000005696) #23 sh3d21 (ENSAPEG00000005738) #24 eva1ba (ENSAPEG00000005773) #25 STK40 (ENSAPEG00000005892) #26 OSCP1 (ENSAPEG00000005918) #27 ENSAPEG00000005981 #28 mrps15 (ENSAPEG00000005965) #29 csf3r (ENSAPEG00000005997) #30 GRIK3 (ENSAPEG00000006019) #31 ZC3H12A (ENSAPEG00000006072) #32 ENSAPEG00000006078 #33 INPP5B (ENSAPEG00000006094) #35 mtf1 (ENSAPEG00000006125) #36 yrdc (ENSAPEG00000006164) #37 MANEAL (ENSAPEG00000006178) Spiny chromis MODERN SPECIES SRSF10 (ENSAPOG00000024544) pnrc2 (ENSAPOG00000024543) #7 cnr2 (ENSAPOG00000024541) #8 akirin1 (ENSAPOG00000024540) #9 rhbdl2 (ENSAPOG00000024538) #10 MYCBP (ENSAPOG00000024534) #12 rragca (ENSAPOG00000024532) #13 pou3f1 (ENSAPOG00000024530) #14 utp11 (ENSAPOG00000024525) #15 FHL3 (ENSAPOG00000024520) #16 rspo1 (ENSAPOG00000024512) #17 gnl2 (ENSAPOG00000024507) #18 dnali1 (ENSAPOG00000024495) #19 SNIP1 (ENSAPOG00000024490) #20 MAP3K6 (ENSAPOG00000024486) #21 MAP7D1 (ENSAPOG00000024474) #22 THRAP3 (ENSAPOG00000024453) #23 sh3d21 (ENSAPOG00000024442) #24 eva1ba (ENSAPOG00000024432) #25 STK40 (ENSAPOG00000024423) #26 OSCP1 (ENSAPOG00000024408) #27 ENSAPOG00000024397 mrps15 (ENSAPOG00000024393) #29 csf3r (ENSAPOG00000024384) #30 GRIK3 (ENSAPOG00000024373) #31 ZC3H12A (ENSAPOG00000024328) #32 ENSAPOG00000024319 #33 INPP5B (ENSAPOG00000024312) #35 mtf1 (ENSAPOG00000024298) #36 yrdc (ENSAPOG00000024293) #37 MANEAL (ENSAPOG00000024286) Bicolor damselfish MODERN SPECIES 1002 pou3f1 (ENSSPAG00000017202) #14 utp11 (ENSSPAG00000017221) #15 FHL3 (ENSSPAG00000017252) #16 rspo1 (ENSSPAG00000017297) #17 gnl2 (ENSSPAG00000017473) #18 dnali1 (ENSSPAG00000017535) #19 SNIP1 (ENSSPAG00000017549) #20 MAP3K6 (ENSSPAG00000017562) #21 MAP7D1 (ENSSPAG00000017601) #22 ENSSPAG00000017651 #23 sh3d21 (ENSSPAG00000017676) #24 eva1ba (ENSSPAG00000017702) #25 Cichlidae ANCESTRAL SPECIES 9 ENSGT00940000154450.uc ENSGT00530000063881.a.b #7 ENSGT01060000248564.a.b #8 ENSGT00940000158787 #9 ENSGT00940000159442 #10 ENSGT00390000017974.nb #12 ENSGT00950000183031.A.a.a #13 ENSGT00940000165372 #14 ENSGT00390000005813 #15 ENSGT00950000183028.a.b.a #16 ENSGT00940000158871 #17 ENSGT00810000125524 #18 ENSGT00390000003012 #19 ENSGT00940000156553 #20 ENSGT00940000159398 #21 ENSGT00950000182941.a.a.b.e.a.b #22 ENSGT00950000183163.a.a.ab #23 ENSGT00940000160627 #24 ENSGT00940000154096.b.b.b.b.b #25 ENSGT00950000182986.b #26 ENSGT00390000004808.e #27 ENSGT00940000166129 #28 ENSGT00390000001737 #29 ENSGT00940000158915 #30 ENSGT00940000159465 #31 ENSGT00940000155107.a.a.a #32 ENSGT00990000204035 #33 ENSGT00600000085609 ENSGT00940000178211 ENSGT00940000156762 #35 ENSGT00940000157291 #36 Pseudocrenilabrinae ANCESTRAL SPECIES 2 ENSGT00940000154450.uc ENSGT00530000063881.a.b #7 ENSGT01060000248564.a.b #8 ENSGT00940000158787 #9 ENSGT00940000159442 #10 ENSGT00390000017974.nb #12 ENSGT00950000183031.A.a.a #13 ENSGT00940000165372 #14 ENSGT00390000005813 #15 ENSGT00950000183028.a.b.a #16 ENSGT00940000158871 #17 ENSGT00810000125524 #18 ENSGT00390000003012 #19 ENSGT00940000156553 #20 ENSGT00940000159398 #21 ENSGT00950000182941.a.a.b.e.a.b #22 ENSGT00950000183163.a.a.ab #23 ENSGT00940000160627 #24 ENSGT00940000154096.b.b.b.b.b #25 ENSGT00950000182986.b #26 ENSGT00390000004808.e #27 ENSGT00940000166129 #28 ENSGT00390000001737 #29 ENSGT00940000158915 #30 ENSGT00940000159465 #31 ENSGT00940000155107.a.a.a #32 ENSGT00990000204035 #33 ENSGT00600000085609 ENSGT00940000178211 ENSGT00940000156762 #35 ENSGT00940000157291 #36 Pseudocrenilabrinae_A ANCESTRAL SPECIES 1 ENSGT00940000154450.uc ENSGT00530000063881.a.b #7 ENSGT01060000248564.a.b #8 ENSGT00940000158787 #9 ENSGT00940000159442 #10 ENSGT00390000017974.nb #12 ENSGT00950000183031.A.a.a #13 ENSGT00940000165372 #14 ENSGT00390000005813 #15 ENSGT00950000183028.a.b.a #16 ENSGT00940000158871 #17 ENSGT00810000125524 #18 ENSGT00390000003012 #19 ENSGT00940000156553 #20 ENSGT00940000159398 #21 ENSGT00950000182941.a.a.b.e.a.b #22 ENSGT00950000183163.a.a.ab #23 ENSGT00940000160627 #24 ENSGT00940000154096.b.b.b.b.b #25 ENSGT00950000182986.b #26 ENSGT00390000004808.e #27 ENSGT00940000166129 #28 ENSGT00390000001737 #29 ENSGT00940000158915 #30 ENSGT00940000159465 #31 ENSGT00940000155107.a.a.a #32 ENSGT00990000204035 #33 ENSGT00940000156762 #35 ENSGT00940000157291 #36 ENSGT00390000015364.b #37 ENSGT00390000016054.b.i Haplochromini ANCESTRAL SPECIES 6 ENSGT00530000063881.a.b #7 ENSGT01060000248564.a.b #8 ENSGT00940000158787 #9 ENSGT00940000159442 #10 ENSGT00390000017974.nb #12 ENSGT00950000183031.A.a.a #13 ENSGT00940000165372 #14 ENSGT00390000005813 #15 ENSGT00950000183028.a.b.a #16 ENSGT00940000158871 #17 ENSGT00940000166920 ENSGT00810000125524 #18 ENSGT00390000003012 #19 ENSGT00940000156553 #20 ENSGT00940000159398 #21 ENSGT00950000182941.a.a.b.e.a.b #22 ENSGT00950000183163.a.a.ab #23 ENSGT00940000160627 #24 ENSGT00940000154096.b.b.b.b.b #25 ENSGT00950000182986.b #26 ENSGT00390000004808.e #27 ENSGT00940000166129 #28 ENSGT00390000001737 #29 ENSGT00940000158915 #30 ENSGT00940000159465 #31 ENSGT00940000155107.a.a.a #32 ENSGT00990000204035 #33 ENSGT00940000156762 #35 ENSGT00940000157291 #36 ENSGT00390000015364.b #37 ENSGT00390000016054.b.i Haplochromini_A ANCESTRAL SPECIES 18 ENSGT00530000063881.a.b #7 ENSGT01060000248564.a.b #8 ENSGT00940000158787 #9 ENSGT00940000159442 #10 ENSGT00390000017974.nb #12 ENSGT00950000183031.A.a.a #13 ENSGT00940000165372 #14 ENSGT00390000005813 #15 ENSGT00950000183028.a.b.a #16 ENSGT00940000158871 #17 ENSGT00940000166920 ENSGT00810000125524 #18 ENSGT00390000003012 #19 ENSGT00940000156553 #20 ENSGT00940000159398 #21 ENSGT00950000182941.a.a.b.e.a.b #22 ENSGT00950000183163.a.a.ab #23 ENSGT00940000160627 #24 ENSGT00940000154096.b.b.b.b.b #25 ENSGT00950000182986.b #26 ENSGT00390000004808.e #27 ENSGT00940000166129 #28 ENSGT00390000001737 #29 ENSGT00940000158915 #30 ENSGT00940000159465 #31 ENSGT00940000155107.a.a.a #32 ENSGT00990000204035 #33 ENSGT00940000156762 #35 ENSGT00940000157291 #36 ENSGT00390000015364.b #37 ENSGT00390000016054.b.i P. nyererei MODERN SPECIES 362 SRSF10 (ENSPNYG00000012923) pnrc2 (ENSPNYG00000012942) #7 cnr2 (ENSPNYG00000012954) #8 akirin1 (ENSPNYG00000012970) #9 rhbdl2 (ENSPNYG00000013006) #10 MYCBP (ENSPNYG00000013028) #12 rragca (ENSPNYG00000013099) #13 pou3f1 (ENSPNYG00000013130) #14 utp11 (ENSPNYG00000013140) #15 FHL3 (ENSPNYG00000013162) #16 rspo1 (ENSPNYG00000013177) #17 ENSPNYG00000013195 dnali1 (ENSPNYG00000013211) #19 SNIP1 (ENSPNYG00000013230) #20 ENSPNYG00000013247 #21 MAP7D1 (ENSPNYG00000013285) #22 THRAP3 (ENSPNYG00000013314) #23 sh3d21 (ENSPNYG00000013339) #24 eva1ba (ENSPNYG00000013357) #25 STK40 (ENSPNYG00000013365) #26 ENSPNYG00000013399 #27 ENSPNYG00000013414 #28 mrps15 (ENSPNYG00000013431) #29 csf3r (ENSPNYG00000013467) #30 GRIK3 (ENSPNYG00000013498) #31 ZC3H12A (ENSPNYG00000013534) #32 ENSPNYG00000013556 INPP5B (ENSPNYG00000013593) #35 mtf1 (ENSPNYG00000013739) #36 yrdc (ENSPNYG00000013956) #37 MANEAL (ENSPNYG00000013969) Haplochromini_B ANCESTRAL SPECIES 6 ENSGT00530000063881.a.b #7 ENSGT01060000248564.a.b #8 ENSGT00940000158787 #9 ENSGT00940000159442 #10 ENSGT00390000017974.nb #12 ENSGT00950000183031.A.a.a #13 ENSGT00940000165372 #14 ENSGT00390000005813 #15 ENSGT00950000183028.a.b.a #16 ENSGT00940000158871 #17 ENSGT00940000166920 ENSGT00810000125524 #18 ENSGT00390000003012 #19 ENSGT00940000156553 #20 ENSGT00940000159398 #21 ENSGT00950000182941.a.a.b.e.a.b #22 ENSGT00950000183163.a.a.ab #23 ENSGT00940000160627 #24 ENSGT00940000154096.b.b.b.b.b #25 ENSGT00950000182986.b #26 ENSGT00390000004808.e #27 ENSGT00940000166129 #28 ENSGT00390000001737 #29 ENSGT00940000158915 #30 ENSGT00940000159465 #31 ENSGT00940000155107.a.a.a #32 ENSGT00990000204035 #33 ENSGT00940000156762 #35 ENSGT00940000157291 #36 ENSGT00390000015364.b #37 ENSGT00390000016054.b.i Zebra mbuna MODERN SPECIES 1093 ENSMZEG00005007618 ENSMZEG00005007606 xrcc1 (ENSMZEG00005007596) drd2l (ENSMZEG00005007578) ethe1 (ENSMZEG00005007552) ethe1 (ENSMZEG00005007535) ENSMZEG00005007520 ENSMZEG00005007501 irgq2 (ENSMZEG00005007489) ENSMZEG00005007454 cox5aa (ENSMZEG00005007429) gnl2 (ENSMZEG00005007393) #18 dnali1 (ENSMZEG00005007377) #19 SNIP1 (ENSMZEG00005007365) #20 ENSMZEG00005007342 #21 MAP7D1 (ENSMZEG00005007251) #22 THRAP3 (ENSMZEG00005007212) #23 sh3d21 (ENSMZEG00005007196) #24 eva1ba (ENSMZEG00005007187) #25 STK40 (ENSMZEG00005007149) #26 OSCP1 (ENSMZEG00005007120) #27 ENSMZEG00005007095 #28 mrps15 (ENSMZEG00005007070) #29 csf3r (ENSMZEG00005007036) #30 GRIK3 (ENSMZEG00005007006) #31 ZC3H12A (ENSMZEG00005006997) #32 ENSMZEG00005006991 #33 ENSMZEG00005006982 INPP5B (ENSMZEG00005006964) #35 mtf1 (ENSMZEG00005006956) #36 yrdc (ENSMZEG00005006948) #37 Eastern happy MODERN SPECIES 2 SRSF10 (ENSACLG00000000662) pnrc2 (ENSACLG00000000649) #7 cnr2 (ENSACLG00000000646) #8 akirin1 (ENSACLG00000000618) #9 rhbdl2 (ENSACLG00000000595) #10 MYCBP (ENSACLG00000000565) #12 rragca (ENSACLG00000000534) #13 pou3f1 (ENSACLG00000000389) #14 utp11 (ENSACLG00000000339) #15 FHL3 (ENSACLG00000000312) #16 rspo1 (ENSACLG00000000298) #17 dnali1 (ENSACLG00000000265) #19 ENSACLG00000000115 SNIP1 (ENSACLG00000000108) #20 ENSACLG00000000084 #21 MAP7D1 (ENSACLG00000000048) #22 ENSACLG00000027855 THRAP3 (ENSACLG00000027851) #23 sh3d21 (ENSACLG00000027848) #24 eva1ba (ENSACLG00000027847) #25 STK40 (ENSACLG00000027839) #26 OSCP1 (ENSACLG00000027829) #27 ENSACLG00000027824 #28 mrps15 (ENSACLG00000027820) #29 csf3r (ENSACLG00000027809) #30 GRIK3 (ENSACLG00000027806) #31 ZC3H12A (ENSACLG00000027801) #32 ENSACLG00000027799 #33 INPP5B (ENSACLG00000027782) #35 mtf1 (ENSACLG00000027779) #36 yrdc (ENSACLG00000027775) #37 Burton s mouthbrooder MODERN SPECIES 340 SRSF10 (ENSHBUG00000010070) pnrc2 (ENSHBUG00000010043) #7 cnr2 (ENSHBUG00000010030) #8 akirin1 (ENSHBUG00000010024) #9 rhbdl2 (ENSHBUG00000009992) #10 MYCBP (ENSHBUG00000009957) #12 rragca (ENSHBUG00000009931) #13 pou3f1 (ENSHBUG00000009911) #14 utp11 (ENSHBUG00000009895) #15 FHL3 (ENSHBUG00000009864) #16 rspo1 (ENSHBUG00000009811) #17 ENSHBUG00000000835 dnali1 (ENSHBUG00000009777) #19 SNIP1 (ENSHBUG00000009756) #20 ENSHBUG00000009741 #21 MAP7D1 (ENSHBUG00000009652) #22 THRAP3 (ENSHBUG00000009602) #23 sh3d21 (ENSHBUG00000009579) #24 eva1ba (ENSHBUG00000009558) #25 STK40 (ENSHBUG00000009547) #26 OSCP1 (ENSHBUG00000009513) #27 ENSHBUG00000009469 #28 mrps15 (ENSHBUG00000009456) #29 csf3r (ENSHBUG00000009429) #30 GRIK3 (ENSHBUG00000009396) #31 ZC3H12A (ENSHBUG00000009356) #32 INPP5B (ENSHBUG00000009350) #35 mtf1 (ENSHBUG00000009314) #36 yrdc (ENSHBUG00000009298) #37 MANEAL (ENSHBUG00000009290) LIN28A (ENSHBUG00000009265) Lyretail cichlid MODERN SPECIES 311 ENSNBRG00000010616 pnrc2 (ENSNBRG00000010605) #7 cnr2 (ENSNBRG00000010586) #8 akirin1 (ENSNBRG00000010549) #9 rhbdl2 (ENSNBRG00000010511) #10 MYCBP (ENSNBRG00000010493) #12 rragca (ENSNBRG00000010467) #13 pou3f1 (ENSNBRG00000010456) #14 utp11 (ENSNBRG00000010435) #15 FHL3 (ENSNBRG00000010416) #16 rspo1 (ENSNBRG00000010347) #17 gnl2 (ENSNBRG00000010291) #18 dnali1 (ENSNBRG00000010268) #19 SNIP1 (ENSNBRG00000010257) #20 ENSNBRG00000010049 #21 MAP7D1 (ENSNBRG00000010005) #22 THRAP3 (ENSNBRG00000009991) #23 sh3d21 (ENSNBRG00000009956) #24 eva1ba (ENSNBRG00000009946) #25 STK40 (ENSNBRG00000009915) #26 OSCP1 (ENSNBRG00000009883) #27 ENSNBRG00000009860 #28 mrps15 (ENSNBRG00000009851) #29 csf3r (ENSNBRG00000009712) #30 ENSNBRG00000009681 GRIK3 (ENSNBRG00000009631) #31 ZC3H12A (ENSNBRG00000009607) #32 ENSNBRG00000009581 ENSNBRG00000009571 #35 ENSNBRG00000009559 #35 mtf1 (ENSNBRG00000009532) #36 Nile tilapia MODERN SPECIES 2 ENSONIG00000028387 cnr2 (ENSONIG00000016314) #8 akirin1 (ENSONIG00000039753) #9 rhbdl2 (ENSONIG00000016311) #10 MYCBP (ENSONIG00000035578) #12 rragc (ENSONIG00000032190) #13 pou3f1 (ENSONIG00000021113) #14 utp11 (ENSONIG00000033069) #15 fhl3 (ENSONIG00000013661) #16 rspo1 (ENSONIG00000016302) #17 ENSONIG00000016291 dnali1 (ENSONIG00000016300) #19 SNIP1 (ENSONIG00000016290) #20 ENSONIG00000041284 ENSONIG00000016285 #21 MAP7D1 (ENSONIG00000016283) #22 THRAP3 (ENSONIG00000016278) #23 sh3d21 (ENSONIG00000016273) #24 eva1b (ENSONIG00000042590) #25 STK40 (ENSONIG00000037285) #26 OSCP1 (ENSONIG00000016265) #27 ENSONIG00000043059 #28 mrps15 (ENSONIG00000016261) #29 csf3r (ENSONIG00000016254) #30 GRIK3 (ENSONIG00000016238) #31 ZC3H12A (ENSONIG00000016235) #32 ENSONIG00000037129 #33 ENSONIG00000030694 INPP5B (ENSONIG00000016229) #35 mtf1 (ENSONIG00000016218) #36 yrdc (ENSONIG00000016213) #37 Midas cichlid MODERN SPECIES 668 pnrc2 (ENSACIG00000018693) #7 cnr2 (ENSACIG00000018688) #8 akirin1 (ENSACIG00000018678) #9 rhbdl2 (ENSACIG00000018661) #10 ENSACIG00000018646 MYCBP (ENSACIG00000018598) #12 rragca (ENSACIG00000018548) #13 pou3f1 (ENSACIG00000018538) #14 utp11 (ENSACIG00000018523) #15 FHL3 (ENSACIG00000018508) #16 rspo1 (ENSACIG00000018378) #17 gnl2 (ENSACIG00000018346) #18 dnali1 (ENSACIG00000018337) #19 SNIP1 (ENSACIG00000018325) #20 ENSACIG00000018194 #21 MAP7D1 (ENSACIG00000018142) #22 THRAP3 (ENSACIG00000018110) #23 ENSACIG00000018107 sh3d21 (ENSACIG00000018083) #24 eva1ba (ENSACIG00000018069) #25 STK40 (ENSACIG00000018038) #26 OSCP1 (ENSACIG00000018007) #27 ENSACIG00000017948 #28 mrps15 (ENSACIG00000017933) #29 csf3r (ENSACIG00000017809) #30 GRIK3 (ENSACIG00000017772) #31 ZC3H12A (ENSACIG00000017750) #32 INPP5B (ENSACIG00000017714) #35 mtf1 (ENSACIG00000017387) #36 yrdc (ENSACIG00000017330) #37 MANEAL (ENSACIG00000017324) Atherinomorphae ANCESTRAL SPECIES ENSGT00530000063881.a.b #7 ENSGT01060000248564.a.b #8 ENSGT00940000158787 #9 ENSGT00940000159442 #10 ENSGT01090000260070.C.a #11 ENSGT00390000017974.nb #12 ENSGT00950000183031.A.a.a #13 ENSGT00940000165372 #14 ENSGT00390000005813 #15 ENSGT00950000183028.a.b.a #16 ENSGT00940000158871 #17 ENSGT00810000125524 #18 ENSGT00390000003012 #19 ENSGT00940000156553 #20 ENSGT00940000159398 #21 ENSGT00950000182941.a.a.b.e.a.b #22 ENSGT00950000183163.a.a.ab #23 ENSGT00940000160627 #24 ENSGT00940000154096.b.b.b.b.b #25 ENSGT00950000182986.b #26 ENSGT00390000004808.e #27 ENSGT00940000166129 #28 ENSGT00390000001737 #29 ENSGT00940000158915 #30 ENSGT00530000068429 ENSGT00940000159465 #31 ENSGT00940000155107.a.a.a #32 ENSGT00990000204035 #33 ENSGT00600000085609 ENSGT00940000156762 #35 ENSGT00940000157291 #36 Cyprinodontiformes ANCESTRAL SPECIES ENSGT00530000063881.a.b #7 ENSGT01060000248564.a.b #8 ENSGT00940000158787 #9 ENSGT00940000159442 #10 ENSGT01090000260070.C.a #11 ENSGT00390000017974.nb #12 ENSGT00950000183031.A.a.a #13 ENSGT00940000165372 #14 ENSGT00390000005813 #15 ENSGT00950000183028.a.b.a #16 ENSGT00940000158871 #17 ENSGT00810000125524 #18 ENSGT00390000003012 #19 ENSGT00940000156553 #20 ENSGT00940000159398 #21 ENSGT00950000182941.a.a.b.e.a.b #22 ENSGT00950000183163.a.a.ab #23 ENSGT00940000160627 #24 ENSGT00940000154096.b.b.b.b.b #25 ENSGT00950000182986.b #26 ENSGT00390000004808.e #27 ENSGT00940000166129 #28 ENSGT00390000001737 #29 ENSGT00940000158915 #30 ENSGT00530000068429 ENSGT00940000159465 #31 ENSGT00940000155107.a.a.a #32 ENSGT00990000204035 #33 ENSGT00600000085609 ENSGT00940000156762 #35 ENSGT00940000157291 #36 Aplocheiloidei ANCESTRAL SPECIES 2 ENSGT00940000164147.a ENSGT00530000063881.a.b #7 ENSGT01060000248564.a.b #8 ENSGT00940000158787 #9 ENSGT00940000159442 #10 ENSGT00390000017974.nb #12 ENSGT00950000183031.A.a.a #13 ENSGT00940000165372 #14 ENSGT00390000005813 #15 ENSGT00950000183028.a.b.a #16 ENSGT00940000158871 #17 ENSGT00810000125524 #18 ENSGT00390000003012 #19 ENSGT00940000156553 #20 ENSGT00940000159398 #21 ENSGT00950000182941.a.a.b.e.a.b #22 ENSGT00950000183163.a.a.ab #23 ENSGT00940000160627 #24 ENSGT00940000154096.b.b.b.b.b #25 ENSGT00950000182986.b #26 ENSGT00390000004808.e #27 ENSGT00940000166129 #28 ENSGT00390000001737 #29 ENSGT00940000158915 #30 ENSGT00940000159465 #31 ENSGT00940000155107.a.a.a #32 ENSGT00990000204035 #33 ENSGT00940000156762 #35 ENSGT00940000157291 #36 ENSGT00390000015364.b #37 ENSGT00390000016054.b.i Mangrove rivulus MODERN SPECIES 73 fabp10a (ENSKMAG00000019147) pnrc2 (ENSKMAG00000019136) #7 cnr2 (ENSKMAG00000019129) #8 akirin1 (ENSKMAG00000019113) #9 rhbdl2 (ENSKMAG00000019086) #10 ENSKMAG00000019064 #12 rragca (ENSKMAG00000019035) #13 pou3f1 (ENSKMAG00000019017) #14 utp11 (ENSKMAG00000018988) #15 FHL3 (ENSKMAG00000018962) #16 rspo1 (ENSKMAG00000018927) #17 gnl2 (ENSKMAG00000018855) #18 dnali1 (ENSKMAG00000018825) #19 SNIP1 (ENSKMAG00000018806) #20 MAP3K6 (ENSKMAG00000018751) #21 ENSKMAG00000018674 #22 ENSKMAG00000018581 nampt2 (ENSKMAG00000018545) LDLRAD2 (ENSKMAG00000018524) ENSKMAG00000018496 ENSKMAG00000018456 camk1ga (ENSKMAG00000018425) USP48 (ENSKMAG00000018330) ENSKMAG00000018292 cyb561d1 (ENSKMAG00000018272) atxn7l2a (ENSKMAG00000018254) sypl2a (ENSKMAG00000018238) fbxo2 (ENSKMAG00000018221) svbp (ENSKMAG00000018202) Turquoise killifish MODERN SPECIES 1614 MYOM3 (ENSNFUG00015020150) ENSNFUG00015020175 FABP10A (ENSNFUG00015020177) PNRC2 (ENSNFUG00015020180) #7 cnr2 (ENSNFUG00015020184) #8 ENSNFUG00015020185 ENSNFUG00015020190 POU3F1 (ENSNFUG00015020193) #14 utp11 (ENSNFUG00015020196) #15 FHL3 (ENSNFUG00015020200) #16 RSPO1 (ENSNFUG00015020203) #17 GNL2 (ENSNFUG00015020230) #18 DNALI1 (ENSNFUG00015020891) #19 SNIP1 (ENSNFUG00015020894) #20 MAP3K6 (ENSNFUG00015000154) #21 MAP7D1 (ENSNFUG00015000327) #22 THRAP3 (ENSNFUG00015000347) #23 SH3D21 (ENSNFUG00015000370) #24 EVA1BA (ENSNFUG00015000393) #25 STK40 (ENSNFUG00015000432) #26 CNFN (ENSNFUG00015000488) #28 MRPS15 (ENSNFUG00015000499) #29 GRIK3 (ENSNFUG00015000661) #31 ZC3H12A (ENSNFUG00015000897) #32 ENSNFUG00015000899 #33 INPP5B (ENSNFUG00015000938) #35 MTF1 (ENSNFUG00015001054) #36 YRDC (ENSNFUG00015001069) #37 MANEAL (ENSNFUG00015001077) LIN28A (ENSNFUG00015001082) MECR (ENSNFUG00015001090) Cyprinodontoidei ANCESTRAL SPECIES ENSGT00530000063881.a.b #7 ENSGT01060000248564.a.b #8 ENSGT00940000158787 #9 ENSGT00940000159442 #10 ENSGT01090000260070.C.a #11 ENSGT00390000017974.nb #12 ENSGT00950000183031.A.a.a #13 ENSGT00940000165372 #14 ENSGT00390000005813 #15 ENSGT00950000183028.a.b.a #16 ENSGT00940000158871 #17 ENSGT00810000125524 #18 ENSGT00390000003012 #19 ENSGT00940000156553 #20 ENSGT00940000159398 #21 ENSGT00950000182941.a.a.b.e.a.b #22 ENSGT00950000183163.a.a.ab #23 ENSGT00940000160627 #24 ENSGT00940000154096.b.b.b.b.b #25 ENSGT00950000182986.b #26 ENSGT00390000004808.e #27 ENSGT00940000166129 #28 ENSGT00390000001737 #29 ENSGT00940000158915 #30 ENSGT00530000068429 ENSGT00940000159465 #31 ENSGT00940000155107.a.a.a #32 ENSGT00990000204035 #33 ENSGT00600000085609 ENSGT00940000156762 #35 ENSGT00940000157291 #36 NAME_4 ANCESTRAL SPECIES 55 ENSGT00530000063881.a.b #7 ENSGT01060000248564.a.b #8 ENSGT00940000158787 #9 ENSGT00940000159442 #10 ENSGT01090000260070.C.a #11 ENSGT00390000017974.nb #12 ENSGT00950000183031.A.a.a #13 ENSGT00940000165372 #14 ENSGT00390000005813 #15 ENSGT00950000183028.a.b.a #16 ENSGT00940000158871 #17 ENSGT00810000125524 #18 ENSGT00390000003012 #19 ENSGT00940000156553 #20 ENSGT00940000159398 #21 ENSGT00950000182941.a.a.b.e.a.b #22 ENSGT00950000183163.a.a.ab #23 ENSGT00940000160627 #24 ENSGT00940000154096.b.b.b.b.b #25 ENSGT00950000182986.b #26 ENSGT00390000004808.e #27 ENSGT00940000171773 ENSGT00390000001737 #29 ENSGT00940000158915 #30 ENSGT00940000159465 #31 ENSGT00940000155107.a.a.a #32 ENSGT00990000204035 #33 ENSGT00940000156762 #35 ENSGT00940000157291 #36 ENSGT00390000015364.b #37 ENSGT00390000016054.b.i Mummichog MODERN SPECIES 2410 MAP7D1 (ENSFHEG00000000983) #22 THRAP3 (ENSFHEG00000000989) #23 sh3d21 (ENSFHEG00000000996) #24 eva1ba (ENSFHEG00000001000) #25 STK40 (ENSFHEG00000001002) #26 OSCP1 (ENSFHEG00000001008) #27 ENSFHEG00000001010 mrps15 (ENSFHEG00000001013) #29 csf3r (ENSFHEG00000001015) #30 GRIK3 (ENSFHEG00000001018) #31 ZC3H12A (ENSFHEG00000001019) #32 INPP5B (ENSFHEG00000001022) #35 mtf1 (ENSFHEG00000001026) #36 yrdc (ENSFHEG00000001029) #37 MANEAL (ENSFHEG00000001033) ENSFHEG00000001035 Sheepshead minnow MODERN SPECIES 118 pnrc2 (ENSCVAG00000018099) #7 cnr2 (ENSCVAG00000018091) #8 akirin1 (ENSCVAG00000018071) #9 rhbdl2 (ENSCVAG00000018052) #10 GJA9 (ENSCVAG00000018024) #11 ENSCVAG00000018007 #12 rragca (ENSCVAG00000017979) #13 pou3f1 (ENSCVAG00000017958) #14 utp11 (ENSCVAG00000000900) #15 FHL3 (ENSCVAG00000017747) #16 rspo1 (ENSCVAG00000000459) #17 gnl2 (ENSCVAG00000017712) #18 dnali1 (ENSCVAG00000017701) #19 snip1 (ENSCVAG00000017689) MAP3K6 (ENSCVAG00000017684) #21 MAP7D1 (ENSCVAG00000017671) #22 THRAP3 (ENSCVAG00000017634) #23 sh3d21 (ENSCVAG00000017624) #24 eva1ba (ENSCVAG00000017604) #25 STK40 (ENSCVAG00000017594) #26 OSCP1 (ENSCVAG00000017554) #27 ENSCVAG00000017521 mrps15 (ENSCVAG00000017500) #29 csf3r (ENSCVAG00000017491) #30 GRIK3 (ENSCVAG00000017478) #31 ZC3H12A (ENSCVAG00000017420) #32 ENSCVAG00000017412 #33 INPP5B (ENSCVAG00000017401) #35 mtf1 (ENSCVAG00000017389) #36 yrdc (ENSCVAG00000017355) #37 MANEAL (ENSCVAG00000017347) Poeciliinae ANCESTRAL SPECIES ENSGT00940000164147.a ENSGT00530000063881.a.b #7 ENSGT01060000248564.a.b #8 ENSGT00940000158787 #9 ENSGT00940000159442 #10 ENSGT00390000017974.nb #12 ENSGT00950000183031.A.a.a #13 ENSGT00940000165372 #14 ENSGT00390000005813 #15 ENSGT00950000183028.a.b.a #16 ENSGT00940000158871 #17 ENSGT00810000125524 #18 ENSGT00390000003012 #19 ENSGT00940000156553 #20 ENSGT00940000159398 #21 ENSGT00950000182941.a.a.b.e.a.b #22 ENSGT00950000183163.a.a.ab #23 ENSGT00940000160627 #24 ENSGT00940000154096.b.b.b.b.b #25 ENSGT00950000182986.b #26 ENSGT00390000004808.e #27 ENSGT00940000166129 #28 ENSGT00390000001737 #29 ENSGT00940000158915 #30 ENSGT00530000068429 ENSGT00940000159465 #31 ENSGT00940000155107.a.a.a #32 ENSGT00990000204035 #33 ENSGT00600000085609 ENSGT00940000156762 #35 ENSGT00940000157291 #36 Poecilia ANCESTRAL SPECIES ENSGT00940000164147.a ENSGT00530000063881.a.b #7 ENSGT01060000248564.a.b #8 ENSGT00940000158787 #9 ENSGT00940000159442 #10 ENSGT00390000017974.nb #12 ENSGT00950000183031.A.a.a #13 ENSGT00940000165372 #14 ENSGT00390000005813 #15 ENSGT00950000183028.a.b.a #16 ENSGT00940000158871 #17 ENSGT00810000125524 #18 ENSGT00390000003012 #19 ENSGT00940000156553 #20 ENSGT00940000159398 #21 ENSGT00950000182941.a.a.b.e.a.b #22 ENSGT00950000183163.a.a.ab #23 ENSGT00940000160627 #24 ENSGT00940000154096.b.b.b.b.b #25 ENSGT00950000182986.b #26 ENSGT00390000004808.e #27 ENSGT00940000166129 #28 ENSGT00390000001737 #29 ENSGT00940000158915 #30 ENSGT00530000068429 ENSGT00940000159465 #31 ENSGT00940000155107.a.a.a #32 ENSGT00990000204035 #33 ENSGT00600000085609 ENSGT00940000156762 #35 ENSGT00940000157291 #36 NAME_6 ANCESTRAL SPECIES 152 ENSGT00810000125524 #18 ENSGT00390000003012 #19 ENSGT00940000156553 #20 ENSGT00940000159398 #21 ENSGT00950000182941.a.a.b.e.a.b #22 ENSGT00950000183163.a.a.ab #23 ENSGT00940000160627 #24 ENSGT00940000154096.b.b.b.b.b #25 ENSGT00950000182986.b #26 ENSGT00390000004808.e #27 ENSGT00940000171773 ENSGT00390000001737 #29 ENSGT00940000158915 #30 ENSGT00530000068429 ENSGT00940000159465 #31 ENSGT00940000155107.a.a.a #32 ENSGT00990000204035 #33 ENSGT00600000085609 ENSGT00940000156762 #35 ENSGT00940000157291 #36 Amazon molly MODERN SPECIES 337 gnl2 (ENSPFOG00000012893) #18 dnali1 (ENSPFOG00000012981) #19 SNIP1 (ENSPFOG00000013016) #20 MAP3K6 (ENSPFOG00000013047) #21 MAP7D1 (ENSPFOG00000013255) #22 THRAP3 (ENSPFOG00000013297) #23 sh3d21 (ENSPFOG00000013375) #24 eva1ba (ENSPFOG00000013421) #25 STK40 (ENSPFOG00000013431) #26 OSCP1 (ENSPFOG00000013493) #27 ENSPFOG00000013535 mrps15 (ENSPFOG00000013553) #29 csf3r (ENSPFOG00000013594) #30 ENSPFOG00000022696 GRIK3 (ENSPFOG00000013674) #31 ZC3H12A (ENSPFOG00000013935) #32 ENSPFOG00000013949 #33 ENSPFOG00000022057 INPP5B (ENSPFOG00000013954) #35 mtf1 (ENSPFOG00000013962) #36 Sailfin molly MODERN SPECIES 684 gnl2 (ENSPLAG00000012483) #18 dnali1 (ENSPLAG00000000807) #19 SNIP1 (ENSPLAG00000012467) #20 MAP3K6 (ENSPLAG00000012456) #21 MAP7D1 (ENSPLAG00000000527) #22 THRAP3 (ENSPLAG00000000635) #23 sh3d21 (ENSPLAG00000012341) #24 eva1ba (ENSPLAG00000012312) #25 STK40 (ENSPLAG00000012294) #26 Guppy MODERN SPECIES 446 fabp10a (ENSPREG00000006252) pnrc2 (ENSPREG00000006242) #7 cnr2 (ENSPREG00000006231) #8 akirin1 (ENSPREG00000006214) #9 rhbdl2 (ENSPREG00000006169) #10 ENSPREG00000006142 #12 rragca (ENSPREG00000006113) #13 pou3f1 (ENSPREG00000006101) #14 utp11 (ENSPREG00000006068) #15 FHL3 (ENSPREG00000006051) #16 rspo1 (ENSPREG00000006040) #17 gnl2 (ENSPREG00000005988) #18 dnali1 (ENSPREG00000005961) #19 snip1 (ENSPREG00000005952) MAP3K6 (ENSPREG00000005903) #21 MAP7D1 (ENSPREG00000005854) #22 THRAP3 (ENSPREG00000005816) #23 sh3d21 (ENSPREG00000005794) #24 eva1ba (ENSPREG00000005771) #25 STK40 (ENSPREG00000005733) #26 OSCP1 (ENSPREG00000005686) #27 ENSPREG00000005621 #28 mrps15 (ENSPREG00000005592) #29 csf3r (ENSPREG00000005562) #30 GRIK3 (ENSPREG00000005481) #31 ZC3H12A (ENSPREG00000005453) #32 ENSPREG00000005442 #33 INPP5B (ENSPREG00000005365) #35 mtf1 (ENSPREG00000005331) #36 yrdc (ENSPREG00000005285) #37 MANEAL (ENSPREG00000005276) Platyfish MODERN SPECIES 17 fabp10a (ENSXMAG00000025668) pnrc2 (ENSXMAG00000019531) #7 cnr2 (ENSXMAG00000013232) #8 akirin1 (ENSXMAG00000013230) #9 rhbdl2 (ENSXMAG00000002343) #10 ENSXMAG00000013229 #12 rragca (ENSXMAG00000026290) #13 pou3f1 (ENSXMAG00000019529) #14 utp11 (ENSXMAG00000013219) #15 FHL3 (ENSXMAG00000029691) #16 rspo1 (ENSXMAG00000028817) #17 gnl2 (ENSXMAG00000014898) #18 dnali1 (ENSXMAG00000014886) #19 SNIP1 (ENSXMAG00000014885) #20 ENSXMAG00000014853 #21 MAP7D1 (ENSXMAG00000014815) #22 THRAP3 (ENSXMAG00000014797) #23 sh3d21 (ENSXMAG00000001593) #24 eva1ba (ENSXMAG00000001589) #25 STK40 (ENSXMAG00000029028) #26 OSCP1 (ENSXMAG00000014752) #27 ENSXMAG00000024500 #28 mrps15 (ENSXMAG00000028874) #29 csf3r (ENSXMAG00000014732) #30 GRIK3 (ENSXMAG00000014647) #31 ZC3H12A (ENSXMAG00000014646) #32 ENSXMAG00000021281 #33 INPP5B (ENSXMAG00000014629) #35 mtf1 (ENSXMAG00000014614) #36 yrdc (ENSXMAG00000014606) #37 MANEAL (ENSXMAG00000014596) Oryzias ANCESTRAL SPECIES 2 ENSGT00530000063881.a.b #7 ENSGT01060000248564.a.b #8 ENSGT00940000158787 #9 ENSGT00940000159442 #10 ENSGT01090000260070.C.a #11 ENSGT00390000017974.nb #12 ENSGT00950000183031.A.a.a #13 ENSGT00940000165372 #14 ENSGT00390000005813 #15 ENSGT00950000183028.a.b.a #16 ENSGT00940000158871 #17 ENSGT00810000125524 #18 ENSGT00390000003012 #19 ENSGT00940000156553 #20 ENSGT00940000159398 #21 ENSGT00950000182941.a.a.b.e.a.b #22 ENSGT00950000183163.a.a.ab #23 ENSGT00940000160627 #24 ENSGT00940000154096.b.b.b.b.b #25 ENSGT00950000182986.b #26 ENSGT00390000004808.e #27 ENSGT00940000166129 #28 ENSGT00390000001737 #29 ENSGT00940000158915 #30 ENSGT00940000159465 #31 ENSGT00940000155107.a.a.a #32 ENSGT00990000204035 #33 ENSGT00940000156762 #35 ENSGT00940000157291 #36 ENSGT00390000015364.b #37 ENSGT00390000016054.b.i Oryzias_b ANCESTRAL SPECIES 1 ENSGT00940000164147.a ENSGT00530000063881.a.b #7 ENSGT01060000248564.a.b #8 ENSGT00940000158787 #9 ENSGT00940000159442 #10 ENSGT01090000260070.C.a #11 ENSGT00390000017974.nb #12 ENSGT00940000165372 #14 ENSGT00390000005813 #15 ENSGT00950000183028.a.b.a #16 ENSGT00940000158871 #17 ENSGT00810000125524 #18 ENSGT00390000003012 #19 ENSGT00940000156553 #20 ENSGT00940000159398 #21 ENSGT00950000182941.a.a.b.e.a.b #22 ENSGT00950000183163.a.a.ab #23 ENSGT00940000160627 #24 ENSGT00940000154096.b.b.b.b.b #25 ENSGT00950000182986.b #26 ENSGT00390000004808.e #27 ENSGT00940000166129 #28 ENSGT00390000001737 #29 ENSGT00940000158915 #30 ENSGT00940000159465 #31 ENSGT00940000155107.a.a.a #32 ENSGT00990000204035 #33 ENSGT00940000156762 #35 ENSGT00940000157291 #36 ENSGT00390000015364.b #37 ENSGT00390000016054.b.i Javanese ricefish MODERN SPECIES 7 pnrc2 (ENSOJAG00000008605) #7 cnr2 (ENSOJAG00000008565) #8 akirin1 (ENSOJAG00000008552) #9 rhbdl2 (ENSOJAG00000008540) #10 GJA9 (ENSOJAG00000008511) #11 MYCBP (ENSOJAG00000008501) #12 rragca (ENSOJAG00000008450) #13 pou3f1 (ENSOJAG00000008412) #14 utp11 (ENSOJAG00000008374) #15 FHL3 (ENSOJAG00000008350) #16 rspo1 (ENSOJAG00000008324) #17 gnl2 (ENSOJAG00000008221) #18 dnali1 (ENSOJAG00000008190) #19 SNIP1 (ENSOJAG00000008177) #20 ENSOJAG00000006023 #21 MAP7D1 (ENSOJAG00000005723) #22 ENSOJAG00000005706 THRAP3 (ENSOJAG00000005670) #23 sh3d21 (ENSOJAG00000005635) #24 eva1ba (ENSOJAG00000005620) #25 STK40 (ENSOJAG00000005584) #26 ENSOJAG00000005568 #28 OSCP1 (ENSOJAG00000005328) #27 CSF3R (ENSOJAG00000005292) #30 GRIK3 (ENSOJAG00000004802) #31 ENSOJAG00000004702 ZC3H12A (ENSOJAG00000004692) #32 ENSOJAG00000004681 #33 INPP5B (ENSOJAG00000003535) #35 mtf1 (ENSOJAG00000003279) #36 yrdc (ENSOJAG00000003259) #37 Indian medaka MODERN SPECIES 5 pnrc2 (ENSOMEG00000019937) #7 cnr2 (ENSOMEG00000019931) #8 akirin1 (ENSOMEG00000019917) #9 rhbdl2 (ENSOMEG00000019884) #10 GJA9 (ENSOMEG00000019858) #11 ENSOMEG00000019842 MYCBP (ENSOMEG00000019821) #12 rragca (ENSOMEG00000000525) #13 FHL3 (ENSOMEG00000019712) #16 utp11 (ENSOMEG00000019654) #15 rspo1 (ENSOMEG00000019637) #17 gnl2 (ENSOMEG00000019611) #18 dnali1 (ENSOMEG00000019563) #19 snip1 (ENSOMEG00000019541) MAP3K6 (ENSOMEG00000019496) #21 MAP7D1 (ENSOMEG00000019294) #22 THRAP3 (ENSOMEG00000019164) #23 sh3d21 (ENSOMEG00000019023) #24 eva1ba (ENSOMEG00000018998) #25 STK40 (ENSOMEG00000018961) #26 OSCP1 (ENSOMEG00000018874) #27 ENSOMEG00000018849 mrps15 (ENSOMEG00000000701) #29 csf3r (ENSOMEG00000000488) #30 GRIK3 (ENSOMEG00000018771) #31 ZC3H12A (ENSOMEG00000000483) #32 ENSOMEG00000018697 #33 INPP5B (ENSOMEG00000018665) #35 mtf1 (ENSOMEG00000018579) #36 yrdc (ENSOMEG00000018550) #37 MANEAL (ENSOMEG00000000478) Oryzias_a ANCESTRAL SPECIES 9 ENSGT00530000063881.a.b #7 ENSGT01060000248564.a.b #8 ENSGT00940000158787 #9 ENSGT00940000159442 #10 ENSGT01090000260070.C.a #11 ENSGT00390000017974.nb #12 ENSGT00950000183031.A.a.a #13 ENSGT00940000165372 #14 ENSGT00390000005813 #15 ENSGT00950000183028.a.b.a #16 ENSGT00940000158871 #17 ENSGT00810000125524 #18 ENSGT00390000003012 #19 ENSGT00940000156553 #20 ENSGT00940000159398 #21 ENSGT00950000182941.a.a.b.e.a.b #22 ENSGT00950000183163.a.a.ab #23 ENSGT00940000160627 #24 ENSGT00940000154096.b.b.b.b.b #25 ENSGT00950000182986.b #26 ENSGT00390000004808.e #27 ENSGT00940000166129 #28 ENSGT00390000001737 #29 ENSGT00940000158915 #30 ENSGT00940000159465 #31 ENSGT00940000155107.a.a.a #32 ENSGT00990000204035 #33 ENSGT00940000156762 #35 ENSGT00940000157291 #36 ENSGT00390000015364.b #37 ENSGT00390000016054.b.i Japanese Medaka HdrR MODERN SPECIES 7 cnr2 (ENSORLG00000014779) #8 akirin1 (ENSORLG00000014770) #9 rhbdl2 (ENSORLG00000014754) #10 GJA9 (ENSORLG00000022080) #11 MYCBP (ENSORLG00000024478) #12 rragca (ENSORLG00000014739) #13 pou3f1 (ENSORLG00000014708) #14 utp11 (ENSORLG00000014702) #15 ENSORLG00000021906 FHL3 (ENSORLG00000014671) #16 rspo1 (ENSORLG00000014653) #17 gnl2 (ENSORLG00000014645) #18 ENSORLG00000014620 #19 SNIP1 (ENSORLG00000014602) #20 ENSORLG00000014582 #21 MAP7D1 (ENSORLG00000014562) #22 THRAP3 (ENSORLG00000014550) #23 sh3d21 (ENSORLG00000014532) #24 eva1ba (ENSORLG00000014522) #25 STK40 (ENSORLG00000014517) #26 OSCP1 (ENSORLG00000014500) #27 ENSORLG00000028871 #28 mrps15 (ENSORLG00000014487) #29 CSF3R (ENSORLG00000014472) #30 ENSORLG00000026090 GRIK3 (ENSORLG00000014461) #31 ZC3H12A (ENSORLG00000014448) #32 INPP5B (ENSORLG00000014438) #35 mtf1 (ENSORLG00000014411) #36 yrdc (ENSORLG00000014393) #37 MANEAL (ENSORLG00000014388) Chinese medaka MODERN SPECIES 1121 utp11 (ENSOSIG00000008439) #15 FHL3 (ENSOSIG00000008444) #16 rspo1 (ENSOSIG00000008445) #17 gnl2 (ENSOSIG00000008451) #18 dnali1 (ENSOSIG00000008453) #19 SNIP1 (ENSOSIG00000008454) #20 ENSOSIG00000008457 #21 MAP7D1 (ENSOSIG00000008559) #22 THRAP3 (ENSOSIG00000008565) #23 sh3d21 (ENSOSIG00000008569) #24 eva1ba (ENSOSIG00000008574) #25 STK40 (ENSOSIG00000008577) #26 OSCP1 (ENSOSIG00000008586) #27 ENSOSIG00000008733 #28 mrps15 (ENSOSIG00000008734) #29 csf3r (ENSOSIG00000008736) #30 GRIK3 (ENSOSIG00000008739) #31 ENSOSIG00000011075 ZC3H12A (ENSOSIG00000011076) #32 ENSOSIG00000011078 #33 INPP5B (ENSOSIG00000011093) #35 mtf1 (ENSOSIG00000012847) #36 yrdc (ENSOSIG00000012916) #37 Tiger tail seahorse MODERN SPECIES 319 FHL3 (ENSHCOG00000012021) #16 rspo1 (ENSHCOG00000012060) #17 gnl2 (ENSHCOG00000012109) #18 dnali1 (ENSHCOG00000012126) #19 SNIP1 (ENSHCOG00000012146) #20 ENSHCOG00000012157 #21 MAP7D1 (ENSHCOG00000012178) #22 sh3d21 (ENSHCOG00000012205) #24 Pinecone sodierfish MODERN SPECIES 7 pnrc2 (ENSMMDG00005017854) #7 cnr2 (ENSMMDG00005017851) #8 akirin1 (ENSMMDG00005017848) #9 rhbdl2 (ENSMMDG00005017845) #10 GJA9 (ENSMMDG00005017842) #11 MYCBP (ENSMMDG00005017840) #12 rragca (ENSMMDG00005017838) #13 pou3f1 (ENSMMDG00005017837) #14 utp11 (ENSMMDG00005017835) #15 FHL3 (ENSMMDG00005017832) #16 rspo1 (ENSMMDG00005017827) #17 gnl2 (ENSMMDG00005017817) #18 dnali1 (ENSMMDG00005017815) #19 snip1 (ENSMMDG00005017814) MAP3K6 (ENSMMDG00005015884) #21 MAP7D1 (ENSMMDG00005015855) #22 THRAP3 (ENSMMDG00005015833) #23 sh3d21 (ENSMMDG00005015819) #24 eva1ba (ENSMMDG00005015816) #25 STK40 (ENSMMDG00005015813) #26 OSCP1 (ENSMMDG00005015784) #27 ENSMMDG00005015782 mrps15 (ENSMMDG00005015781) #29 csf3r (ENSMMDG00005015763) #30 GRIK3 (ENSMMDG00005015674) #31 ENSMMDG00005015659 ZC3H12A (ENSMMDG00005015627) #32 INPP5B (ENSMMDG00005013409) #35 mtf1 (ENSMMDG00005013384) #36 yrdc (ENSMMDG00005013382) #37 MANEAL (ENSMMDG00005013381) Protacanthopterygii ANCESTRAL SPECIES 50 ENSGT00940000165372 #14 ENSGT00390000005813 #15 ENSGT00950000183028.a.b.a #16 ENSGT00940000158871 #17 ENSGT00810000125524 #18 ENSGT00390000003012 #19 ENSGT00940000156553 #20 ENSGT00940000159398 #21 ENSGT00950000182941.a.a.b.e.a.b #22 ENSGT01010000223313 ENSGT00940000156318.b.b ENSGT00940000154063.C.a.a.b ENSGT00950000183163.a.a.ab #23 ENSGT00940000160627 #24 ENSGT00940000154096.b.b.b.b.b #25 ENSGT00950000182986.b #26 ENSGT00390000004808.e #27 ENSGT01030000235168 ENSGT00390000001737 #29 ENSGT00940000158915 #30 ENSGT00940000159465 #31 ENSGT00940000155107.a.a.a #32 ENSGT00990000203803 #34 ENSGT00940000156762 #35 Salmoninae DUPLICATION Salmoninae ANCESTRAL SPECIES 85 ENSGT00530000063881.a.b.s #7 ENSGT01060000248564.a.b.f #8 ENSGT00940000158787.g.a #9 ENSGT00940000159442.c #10 ENSGT01090000260070.C.a.d #11 ENSGT00390000017974.nb.c #12 ENSGT00950000183031.A.a.a.a.a #13 ENSGT00940000165372.c #14 ENSGT00390000005813.i #15 ENSGT00950000183028.a.b.a.e #16 ENSGT00940000158871.c #17 ENSGT00810000125524.c #18 ENSGT00390000003012 #19 ENSGT00940000156553.g #20 ENSGT00940000159398.d #21 ENSGT00950000182941.a.a.b.e.a.b.e #22 ENSGT00940000154063.C.a.a.b.j.a ENSGT00950000183163.a.a.ab.c #23 ENSGT00940000160627.k #24 ENSGT00940000154096.b.b.b.b.b.b #25 ENSGT00950000182986.b.d #26 ENSGT00390000004808.e.b #27 ENSGT00390000001737.p #29 ENSGT00940000158915.ab.a #30 ENSGT00940000159465.c.a #31 ENSGT00940000155107.a.a.a.a #32 ENSGT00990000203803.c #34 ENSGT00940000156762.i #35 ENSGT00940000157291.j.b #36 ENSGT00390000015364.b.m #37 ENSGT00390000016054.b.i Huchen DUPLICATION Huchen MODERN SPECIES 193 cnr2 (ENSHHUG00000024447) #8 akirin1 (ENSHHUG00000024422) #9 rhbdl2 (ENSHHUG00000024388) #10 GJA9 (ENSHHUG00000024386) #11 ENSHHUG00000024370 #12 rragca (ENSHHUG00000024334) #13 pou3f1 (ENSHHUG00000024330) #14 utp11 (ENSHHUG00000024320) #15 FHL3 (ENSHHUG00000024316) #16 rspo1 (ENSHHUG00000024308) #17 ENSHHUG00000024306 gnl2 (ENSHHUG00000024270) #18 dnali1 (ENSHHUG00000024268) #19 SNIP1 (ENSHHUG00000039761) #20 MAP3K6 (ENSHHUG00000039558) #21 MAP7D1 (ENSHHUG00000039548) #22 ENSHHUG00000039543 #22 ENSHHUG00000039517 THRAP3 (ENSHHUG00000039505) #23 sh3d21 (ENSHHUG00000039486) #24 eva1ba (ENSHHUG00000039481) #25 STK40 (ENSHHUG00000039465) #26 ENSHHUG00000039453 OSCP1 (ENSHHUG00000039437) #27 ENSHHUG00000039417 csf3r (ENSHHUG00000039373) #30 GRIK3 (ENSHHUG00000039209) #31 ZC3H12A (ENSHHUG00000039189) #32 ENSHHUG00000039165 #34 INPP5B (ENSHHUG00000039010) #35 mtf1 (ENSHHUG00000038992) #36 Huchen MODERN SPECIES 193 akirin1 (ENSHHUG00000024422) #9 rhbdl2 (ENSHHUG00000024388) #10 GJA9 (ENSHHUG00000024386) #11 ENSHHUG00000024370 #12 rragca (ENSHHUG00000024334) #13 pou3f1 (ENSHHUG00000024330) #14 utp11 (ENSHHUG00000024320) #15 FHL3 (ENSHHUG00000024316) #16 rspo1 (ENSHHUG00000024308) #17 ENSHHUG00000024306 gnl2 (ENSHHUG00000024270) #18 dnali1 (ENSHHUG00000024268) #19 SNIP1 (ENSHHUG00000039761) #20 MAP3K6 (ENSHHUG00000039558) #21 MAP7D1 (ENSHHUG00000039548) #22 ENSHHUG00000039543 #22 ENSHHUG00000039517 THRAP3 (ENSHHUG00000039505) #23 sh3d21 (ENSHHUG00000039486) #24 eva1ba (ENSHHUG00000039481) #25 STK40 (ENSHHUG00000039465) #26 ENSHHUG00000039453 OSCP1 (ENSHHUG00000039437) #27 ENSHHUG00000039417 csf3r (ENSHHUG00000039373) #30 GRIK3 (ENSHHUG00000039209) #31 ZC3H12A (ENSHHUG00000039189) #32 ENSHHUG00000039165 #34 INPP5B (ENSHHUG00000039010) #35 mtf1 (ENSHHUG00000038992) #36 yrdc (ENSHHUG00000038990) #37 Salmoninae_a ANCESTRAL SPECIES 93 ENSGT00530000063881.a.b.s #7 ENSGT01060000248564.a.b.f #8 ENSGT00940000158787.g.a #9 ENSGT00940000159442.c.b #10 ENSGT01090000260070.C.a.d #11 ENSGT00390000017974.nb.c #12 ENSGT00950000183031.A.a.a.a.a #13 ENSGT00940000165372.c #14 ENSGT00390000005813.i #15 ENSGT00950000183028.a.b.a.e #16 ENSGT00940000158871.c #17 ENSGT00810000125524.c #18 ENSGT00390000003012 #19 ENSGT00940000156553.g #20 ENSGT00940000159398.d #21 ENSGT00950000182941.a.a.b.e.a.b.e #22 ENSGT00940000154063.C.a.a.b.j.a ENSGT00950000183163.a.a.ab.c #23 ENSGT00940000160627.k #24 ENSGT00990000211290.B ENSGT00940000154096.b.b.b.b.b.b #25 ENSGT00950000182986.b.d #26 ENSGT00390000004808.e.b #27 ENSGT01030000235168.c.a ENSGT00390000001737.p #29 ENSGT00940000158915.ab.a #30 ENSGT00940000159465.c.a #31 ENSGT00940000155107.a.a.a.a #32 ENSGT00990000203803.c #34 ENSGT00940000156762.i #35 ENSGT00940000157291.j.b #36 Salmo ANCESTRAL SPECIES 32 ENSGT00530000063881.a.b.s #7 ENSGT01060000248564.a.b.f #8 ENSGT00940000158787.g.a #9 ENSGT00940000159442.c.b #10 ENSGT01090000260070.C.a.d #11 ENSGT00390000017974.nb.c #12 ENSGT00950000183031.A.a.a.a.a #13 ENSGT00940000165372.c #14 ENSGT00390000005813.i #15 ENSGT00950000183028.a.b.a.e #16 ENSGT00940000158871.c #17 ENSGT00810000125524.c #18 ENSGT00390000003012 #19 ENSGT00940000156553.g #20 ENSGT00940000159398.d #21 ENSGT00950000182941.a.a.b.e.a.b.e #22 ENSGT00940000154063.C.a.a.b.j.a ENSGT00950000183163.a.a.ab.c #23 ENSGT00940000160627.k #24 ENSGT00990000211290.B ENSGT00940000154096.b.b.b.b.b.b #25 ENSGT00950000182986.b.d #26 ENSGT00390000004808.e.b #27 ENSGT01030000235168.d ENSGT00390000001737.p #29 ENSGT00940000158915.ab.a #30 ENSGT00940000159465.c.a #31 ENSGT00940000155107.a.a.a.a #32 ENSGT00990000203803.c #34 ENSGT00940000156762.i #35 ENSGT00940000157291.j.b #36 Atlantic salmon MODERN SPECIES 11 ENSSSAG00000074665 SRSF10 (ENSSSAG00000092388) cnr2 (ENSSSAG00000042370) #8 akirin1 (ENSSSAG00000028046) #9 rhbdl2 (ENSSSAG00000042235) #10 GJA9 (ENSSSAG00000086489) #11 MYCBP (ENSSSAG00000111295) #12 rragc (ENSSSAG00000029084) #13 utp11 (ENSSSAG00000029460) #15 FHL3 (ENSSSAG00000110756) #16 rspo1 (ENSSSAG00000029819) #17 gnl2 (ENSSSAG00000030089) #18 dnali1 (ENSSSAG00000030760) #19 SNIP1 (ENSSSAG00000031003) #20 ENSSSAG00000031511 #21 MAP7D1 (ENSSSAG00000040212) #22 ENSSSAG00000040460 THRAP3 (ENSSSAG00000041257) #23 sh3d21 (ENSSSAG00000039492) #24 ENSSSAG00000041298 eva1ba (ENSSSAG00000097911) #25 STK40 (ENSSSAG00000100035) #26 OSCP1 (ENSSSAG00000041394) #27 mrps15 (ENSSSAG00000041549) #29 CSF3R (ENSSSAG00000041566) #30 GRIK3 (ENSSSAG00000041700) #31 ZC3H12A (ENSSSAG00000047150) #32 ENSSSAG00000114064 #34 INPP5B (ENSSSAG00000047240) #35 mtf1 (ENSSSAG00000051914) #36 yrdc (ENSSSAG00000051953) #37 River trout MODERN SPECIES 30 cnr2 (ENSSTUG00000043585) #8 akirin1 (ENSSTUG00000043595) #9 rhbdl2 (ENSSTUG00000043631) #10 GJA9 (ENSSTUG00000043643) #11 ENSSTUG00000043663 #12 rragca (ENSSTUG00000043681) #13 pou3f1 (ENSSTUG00000043698) #14 utp11 (ENSSTUG00000043702) #15 FHL3 (ENSSTUG00000043720) #16 rspo1 (ENSSTUG00000043724) #17 ENSSTUG00000043729 gnl2 (ENSSTUG00000043753) #18 dnali1 (ENSSTUG00000043924) #19 SNIP1 (ENSSTUG00000043947) #20 MAP3K6 (ENSSTUG00000043972) #21 MAP7D1 (ENSSTUG00000044228) #22 ENSSTUG00000044325 THRAP3 (ENSSTUG00000044338) #23 sh3d21 (ENSSTUG00000044407) #24 ENSSTUG00000044433 eva1ba (ENSSTUG00000044439) #25 STK40 (ENSSTUG00000044443) #26 OSCP1 (ENSSTUG00000044465) #27 ENSSTUG00000044527 mrps15 (ENSSTUG00000044540) #29 csf3r (ENSSTUG00000044555) #30 GRIK3 (ENSSTUG00000044620) #31 ZC3H12A (ENSSTUG00000045847) #32 INPP5B (ENSSTUG00000045888) #35 mtf1 (ENSSTUG00000046336) #36 yrdc (ENSSTUG00000046359) #37 Oncorhynchus ANCESTRAL SPECIES 3 ENSGT00530000063881.a.b.s #7 ENSGT01060000248564.a.b.f #8 ENSGT00940000158787.g.a #9 ENSGT00940000159442.d #10 ENSGT01090000260070.C.a.d #11 ENSGT00390000017974.nb.c #12 ENSGT00950000183031.A.a.a.a.a #13 ENSGT00940000165372.c #14 ENSGT00390000005813.i #15 ENSGT00950000183028.a.b.a.e #16 ENSGT00940000158871.c #17 ENSGT00810000125524.c #18 ENSGT00390000003012.l.a #19 ENSGT00940000156553.g #20 ENSGT00940000159398.d #21 ENSGT00950000182941.a.a.b.e.a.b.e #22 ENSGT00940000154063.C.a.a.b.j.a ENSGT00950000183163.a.a.ab.c #23 ENSGT00940000160627.k #24 ENSGT00990000211290.B ENSGT00940000154096.b.b.b.b.b.b #25 ENSGT00950000182986.b.d #26 ENSGT00390000004808.e.b #27 ENSGT01030000235168.c.a ENSGT00390000001737.p #29 ENSGT00940000158915.ab.a #30 ENSGT00940000159465.c.a #31 ENSGT00940000155107.a.a.a.a #32 ENSGT00990000203803.c #34 ENSGT00940000156762.i #35 ENSGT00940000157291.j.b #36 Rainbow trout MODERN SPECIES 21 pnrc2 (ENSOMYG00000009031) #7 cnr2 (ENSOMYG00000009045) #8 akirin1 (ENSOMYG00000009097) #9 ENSOMYG00000009147 #12 rragca (ENSOMYG00000009167) #13 ENSOMYG00000071645 pou3f1 (ENSOMYG00000009181) #14 utp11 (ENSOMYG00000009193) #15 FHL3 (ENSOMYG00000009234) #16 rspo1 (ENSOMYG00000009271) #17 ENSOMYG00000002892 gnl2 (ENSOMYG00000009355) #18 dnali1 (ENSOMYG00000009575) #19 SNIP1 (ENSOMYG00000009635) #20 ENSOMYG00000009719 #21 MAP7D1 (ENSOMYG00000009849) #22 ENSOMYG00000073482 ENSOMYG00000009890 THRAP3 (ENSOMYG00000009930) #23 sh3d21 (ENSOMYG00000009987) #24 ENSOMYG00000062962 ENSOMYG00000010013 eva1ba (ENSOMYG00000010031) #25 ENSOMYG00000069582 STK40 (ENSOMYG00000010073) #26 OSCP1 (ENSOMYG00000010242) #27 mrps15 (ENSOMYG00000010362) #29 csf3r (ENSOMYG00000010394) #30 GRIK3 (ENSOMYG00000010580) #31 ZC3H12A (ENSOMYG00000011243) #32 ENSOMYG00000011247 #34 Oncorhynchus_a ANCESTRAL SPECIES 8 ENSGT00530000063881.a.b.s #7 ENSGT01060000248564.a.b.f #8 ENSGT00940000158787.g.a #9 ENSGT00940000159442.c.b #10 ENSGT01090000260070.C.a.d #11 ENSGT00390000017974.nb.c #12 ENSGT00950000183031.A.a.a.a.a #13 ENSGT00940000165372.c #14 ENSGT00390000005813.i #15 ENSGT00950000183028.a.b.a.e #16 ENSGT00940000158871.c #17 ENSGT00810000125524.c #18 ENSGT00390000003012.l.a #19 ENSGT00940000156553.g #20 ENSGT00940000159398.d #21 ENSGT00950000182941.a.a.b.e.a.b.e #22 ENSGT00940000154063.C.a.a.b.j.a ENSGT00950000183163.a.a.ab.c #23 ENSGT00940000160627.k #24 ENSGT00990000211290.B ENSGT00940000154096.b.b.b.b.b.b #25 ENSGT00950000182986.b.d #26 ENSGT00390000004808.e.b #27 ENSGT01030000235168.c.a ENSGT00390000001737.p #29 ENSGT00940000158915.ab.a #30 ENSGT00940000159465.c.a #31 ENSGT00940000155107.a.a.a.a #32 ENSGT00990000203803.c #34 ENSGT00940000156762.i #35 ENSGT00940000157291.j.b #36 Chinook salmon DUPLICATION Chinook salmon DUPLICATION Chinook salmon MODERN SPECIES 22 dhdds (ENSOTSG00005005996) ENSOTSG00005005997 fam110d (ENSOTSG00005006000) SLC9A1 (ENSOTSG00005006007) ENSOTSG00005006123 ENSOTSG00005006142 ENSOTSG00005007950 pou3f1 (ENSOTSG00005007951) #14 utp11 (ENSOTSG00005007952) #15 FHL3 (ENSOTSG00005007953) #16 rspo1 (ENSOTSG00005007954) #17 gnl2 (ENSOTSG00005007955) #18 dnali1 (ENSOTSG00005007956) #19 SNIP1 (ENSOTSG00005007957) #20 ENSOTSG00005007960 #21 MAP7D1 (ENSOTSG00005008519) #22 ENSOTSG00005008523 THRAP3 (ENSOTSG00005008526) #23 sh3d21 (ENSOTSG00005008530) #24 eva1ba (ENSOTSG00005008534) #25 STK40 (ENSOTSG00005008536) #26 OSCP1 (ENSOTSG00005008539) #27 ENSOTSG00005008583 mrps15 (ENSOTSG00005008585) #29 csf3r (ENSOTSG00005008586) #30 GRIK3 (ENSOTSG00005008615) #31 ZC3H12A (ENSOTSG00005011535) #32 ENSOTSG00005011536 #34 INPP5B (ENSOTSG00005011544) #35 mtf1 (ENSOTSG00005012824) #36 yrdc (ENSOTSG00005000054) #37 Chinook salmon MODERN SPECIES 2926 pou3f1 (ENSOTSG00005029284) #14 utp11 (ENSOTSG00005029286) #15 FHL3 (ENSOTSG00005029287) #16 rspo1 (ENSOTSG00005029290) #17 gnl2 (ENSOTSG00005029292) #18 dnali1 (ENSOTSG00005029295) #19 SNIP1 (ENSOTSG00005029299) #20 ENSOTSG00005029304 #21 MAP7D1 (ENSOTSG00005029313) #22 ENSOTSG00005029324 THRAP3 (ENSOTSG00005029326) #23 sh3d21 (ENSOTSG00005029328) #24 eva1ba (ENSOTSG00005029329) #25 STK40 (ENSOTSG00005029330) #26 OSCP1 (ENSOTSG00005029336) #27 mrps15 (ENSOTSG00005029450) #29 ENSOTSG00005029451 csf3r (ENSOTSG00005029452) #30 GRIK3 (ENSOTSG00005029467) #31 ZC3H12A (ENSOTSG00005033079) #32 ENSOTSG00005033081 #34 INPP5B (ENSOTSG00005033083) #35 mtf1 (ENSOTSG00005033088) #36 yrdc (ENSOTSG00005033091) #37 Chinook salmon MODERN SPECIES 22 WDR26 (ENSOTSG00005002078) CNIH4 (ENSOTSG00005002066) ENSOTSG00005002063 CALHM5 (ENSOTSG00005002062) calhm6 (ENSOTSG00005002060) klhl32 (ENSOTSG00005002042) mms22l (ENSOTSG00005002033) pou3f1 (ENSOTSG00005002026) #14 utp11 (ENSOTSG00005002023) #15 FHL3 (ENSOTSG00005002021) #16 rspo1 (ENSOTSG00005002019) #17 gnl2 (ENSOTSG00005002018) #18 dnali1 (ENSOTSG00005002016) #19 SNIP1 (ENSOTSG00005002012) #20 ENSOTSG00005000717 #21 MAP7D1 (ENSOTSG00005011384) #22 ENSOTSG00005011382 THRAP3 (ENSOTSG00005011377) #23 sh3d21 (ENSOTSG00005011372) #24 eva1ba (ENSOTSG00005011369) #25 STK40 (ENSOTSG00005011356) #26 OSCP1 (ENSOTSG00005011313) #27 ENSOTSG00005011310 mrps15 (ENSOTSG00005011308) #29 csf3r (ENSOTSG00005011303) #30 GRIK3 (ENSOTSG00005007874) #31 ZC3H12A (ENSOTSG00005007864) #32 ENSOTSG00005007863 #34 INPP5B (ENSOTSG00005007623) #35 mtf1 (ENSOTSG00005007615) #36 yrdc (ENSOTSG00005007612) #37 Coho salmon MODERN SPECIES 11 cnr2 (ENSOKIG00005017757) #8 akirin1 (ENSOKIG00005017768) #9 rhbdl2 (ENSOKIG00005017791) #10 GJA9 (ENSOKIG00005017806) #11 ENSOKIG00005017810 #12 rragca (ENSOKIG00005017823) #13 ENSOKIG00005017835 pou3f1 (ENSOKIG00005017836) #14 utp11 (ENSOKIG00005017841) #15 FHL3 (ENSOKIG00005017877) #16 rspo1 (ENSOKIG00005017887) #17 gnl2 (ENSOKIG00005017905) #18 dnali1 (ENSOKIG00005017939) #19 SNIP1 (ENSOKIG00005017975) #20 ENSOKIG00005018009 #21 MAP7D1 (ENSOKIG00005018595) #22 ENSOKIG00005018600 THRAP3 (ENSOKIG00005018602) #23 sh3d21 (ENSOKIG00005018614) #24 ENSOKIG00005018636 eva1ba (ENSOKIG00005018655) #25 STK40 (ENSOKIG00005018666) #26 OSCP1 (ENSOKIG00005018695) #27 mrps15 (ENSOKIG00005018782) #29 csf3r (ENSOKIG00005018820) #30 GRIK3 (ENSOKIG00005018849) #31 ZC3H12A (ENSOKIG00005018878) #32 ENSOKIG00005018888 #34 INPP5B (ENSOKIG00005018928) #35 mtf1 (ENSOKIG00005019448) #36 yrdc (ENSOKIG00005019460) #37 Salmoninae ANCESTRAL SPECIES 85 ENSGT00530000063881.a.b.t #7 ENSGT01060000248564.a.b.e #8 ENSGT00940000158787.g.b #9 ENSGT00940000159442.d #10 ENSGT01090000260070.C.a.c #11 ENSGT00390000017974.nb.d #12 ENSGT00950000183031.A.a.a.a.b #13 ENSGT00940000165372.d #14 ENSGT00390000005813.j #15 ENSGT00950000183028.a.b.a.f #16 ENSGT00940000158871.d #17 ENSGT00810000125524.d #18 ENSGT00940000179482 ENSGT00940000156553.h #20 ENSGT00940000159398.c #21 ENSGT00950000182941.a.a.b.e.a.b.f #22 ENSGT00940000154063.C.a.a.b.j.b ENSGT00950000183163.a.a.ab.d #23 ENSGT00940000160627.l #24 ENSGT00940000154096.b.b.b.b.b.a #25 ENSGT00950000182986.b.c #26 ENSGT00390000004808.e.a #27 ENSGT01030000235168.c.b ENSGT00390000001737.o #29 ENSGT00940000158915.ab.b #30 ENSGT00940000159465.d #31 ENSGT00940000155107.a.a.a.b #32 ENSGT00990000203803.d #34 ENSGT00940000156762.j #35 ENSGT00940000157291.j.a #36 ENSGT00390000015364.b.n #37 Salmoninae_a ANCESTRAL SPECIES 39 ENSGT00530000063881.a.b.t #7 ENSGT01060000248564.a.b.e #8 ENSGT00940000158787.g.b #9 ENSGT00940000159442.d #10 ENSGT01090000260070.C.a.c #11 ENSGT00390000017974.nb.d #12 ENSGT00950000183031.A.a.a.a.b #13 ENSGT00940000165372.d #14 ENSGT00390000005813.j #15 ENSGT00950000183028.a.b.a.f #16 ENSGT00940000158871.d #17 ENSGT00810000125524.d #18 ENSGT00940000179482 ENSGT00940000156553.h #20 ENSGT00940000159398.c #21 ENSGT00950000182941.a.a.b.e.a.b.f #22 ENSGT00940000154063.C.a.a.b.j.b ENSGT00950000183163.a.a.ab.d #23 ENSGT00940000160627.l #24 ENSGT00990000211290.A ENSGT00940000154096.b.b.b.b.b.a #25 ENSGT00950000182986.b.c #26 ENSGT00390000004808.e.a #27 ENSGT01030000235168.c.b ENSGT00390000001737.o #29 ENSGT00940000158915.ab.b #30 ENSGT00940000159465.d #31 ENSGT00940000155107.a.a.a.b #32 ENSGT00990000203803.d #34 ENSGT00940000156762.j #35 ENSGT00940000157291.j.a #36 Oncorhynchus ANCESTRAL SPECIES 38 ENSGT00530000063881.a.b.t #7 ENSGT01060000248564.a.b.e #8 ENSGT00940000158787.g.b #9 ENSGT00940000159442.c.a #10 ENSGT01090000260070.C.a.c #11 ENSGT00390000017974.nb.d #12 ENSGT00950000183031.A.a.a.a.b #13 ENSGT00940000165372.d #14 ENSGT00390000005813.j #15 ENSGT00950000183028.a.b.a.f #16 ENSGT00940000158871.d #17 ENSGT00810000125524.d #18 ENSGT00940000179482 ENSGT00940000156553.h #20 ENSGT00940000159398.c #21 ENSGT00950000182941.a.a.b.e.a.b.f #22 ENSGT00940000154063.C.a.a.b.j.b.d ENSGT00940000154063.C.a.a.b.j.b.c ENSGT00950000183163.a.a.ab.d #23 ENSGT00940000160627.l #24 ENSGT00990000211290.A ENSGT00940000154096.b.b.b.b.b.a #25 ENSGT00950000182986.b.c #26 ENSGT00390000004808.e.a #27 ENSGT01030000235168.c.b ENSGT00390000001737.o #29 ENSGT00940000158915.ab.b #30 ENSGT00940000159465.d #31 ENSGT00940000155107.a.a.a.b #32 ENSGT00990000203803.d #34 ENSGT00940000156762.j #35 Oncorhynchus_a ANCESTRAL SPECIES 127 ENSGT00940000165372.d #14 ENSGT00390000005813.j #15 ENSGT00950000183028.a.b.a.f #16 ENSGT00940000158871.d #17 ENSGT00810000125524.d #18 ENSGT00940000179482 ENSGT00940000156553.h #20 ENSGT00940000159398.c #21 ENSGT00950000182941.a.a.b.e.a.b.f #22 ENSGT00940000154063.C.a.a.b.j.b.d ENSGT00940000154063.C.a.a.b.j.b.c ENSGT00950000183163.a.a.ab.d #23 ENSGT00940000160627.l #24 ENSGT00990000211290.A ENSGT00940000154096.b.b.b.b.b.a #25 ENSGT00950000182986.b.c #26 ENSGT00390000004808.e.a #27 ENSGT01030000235168.c.b ENSGT00390000001737.o #29 ENSGT00940000158915.ab.b #30 ENSGT00940000159465.d #31 ENSGT00940000155107.a.a.a.b #32 ENSGT00990000203803.d #34 ENSGT00940000156762.j #35 Chinook salmon DUPLICATION Chinook salmon MODERN SPECIES 2914 cnr2 (ENSOTSG00005030388) #8 akirin1 (ENSOTSG00005030319) #9 rhbdl2 (ENSOTSG00005030317) #10 GJA9 (ENSOTSG00005030316) #11 ENSOTSG00005030315 #12 rragca (ENSOTSG00005030314) #13 ENSOTSG00005030313 pou3f1 (ENSOTSG00005030312) #14 utp11 (ENSOTSG00005030311) #15 FHL3 (ENSOTSG00005030310) #16 rspo1 (ENSOTSG00005030309) #17 gnl2 (ENSOTSG00005030301) #18 ENSOTSG00005030258 SNIP1 (ENSOTSG00005030257) #20 ENSOTSG00005030207 #21 MAP7D1 (ENSOTSG00005030200) #22 ENSOTSG00005030197 ENSOTSG00005030117 THRAP3 (ENSOTSG00005030112) #23 sh3d21 (ENSOTSG00005030111) #24 ENSOTSG00005030110 eva1ba (ENSOTSG00005030108) #25 STK40 (ENSOTSG00005030106) #26 OSCP1 (ENSOTSG00005030103) #27 ENSOTSG00005030101 mrps15 (ENSOTSG00005030100) #29 ENSOTSG00005030098 #30 GRIK3 (ENSOTSG00005026887) #31 ZC3H12A (ENSOTSG00005026883) #32 ENSOTSG00005026882 #34 INPP5B (ENSOTSG00005026202) #35 Chinook salmon MODERN SPECIES 15 akirin1 (ENSOTSG00005023721) #9 rhbdl2 (ENSOTSG00005023724) #10 GJA9 (ENSOTSG00005023725) #11 ENSOTSG00005002623 rragca (ENSOTSG00005002634) #13 ENSOTSG00005002863 pou3f1 (ENSOTSG00005003033) #14 utp11 (ENSOTSG00005003113) #15 FHL3 (ENSOTSG00005003210) #16 ENSOTSG00005003212 rspo1 (ENSOTSG00005003214) #17 gnl2 (ENSOTSG00005003221) #18 ENSOTSG00005003337 SNIP1 (ENSOTSG00005003366) #20 ENSOTSG00005003369 #21 MAP7D1 (ENSOTSG00005003383) #22 ENSOTSG00005003397 ENSOTSG00005003401 THRAP3 (ENSOTSG00005003479) #23 sh3d21 (ENSOTSG00005003486) #24 ENSOTSG00005003493 eva1ba (ENSOTSG00005003495) #25 STK40 (ENSOTSG00005003497) #26 OSCP1 (ENSOTSG00005003499) #27 ENSOTSG00005003502 mrps15 (ENSOTSG00005003503) #29 GRIK3 (ENSOTSG00005003513) #31 ZC3H12A (ENSOTSG00005004525) #32 ENSOTSG00005004527 #34 INPP5B (ENSOTSG00005004531) #35 mtf1 (ENSOTSG00005006701) #36 Coho salmon MODERN SPECIES 4 akirin1 (ENSOKIG00005013285) #9 rhbdl2 (ENSOKIG00005013262) #10 GJA9 (ENSOKIG00005013255) #11 ENSOKIG00005013247 #12 rragca (ENSOKIG00005013221) #13 ENSOKIG00005013216 pou3f1 (ENSOKIG00005013212) #14 utp11 (ENSOKIG00005013205) #15 FHL3 (ENSOKIG00005013194) #16 rspo1 (ENSOKIG00005013187) #17 gnl2 (ENSOKIG00005012985) #18 ENSOKIG00005012932 SNIP1 (ENSOKIG00005012923) #20 MAP3K6 (ENSOKIG00005012344) #21 ENSOKIG00005012292 MAP7D1 (ENSOKIG00005012228) #22 ENSOKIG00005012207 THRAP3 (ENSOKIG00005012188) #23 sh3d21 (ENSOKIG00005012171) #24 ENSOKIG00005012134 eva1ba (ENSOKIG00005012126) #25 STK40 (ENSOKIG00005012106) #26 ENSOKIG00005012100 ENSOKIG00005012097 OSCP1 (ENSOKIG00005012056) #27 ENSOKIG00005012040 mrps15 (ENSOKIG00005012017) #29 ENSOKIG00005011934 #30 GRIK3 (ENSOKIG00005010276) #31 ZC3H12A (ENSOKIG00005010157) #32 ENSOKIG00005010146 #34 Rainbow trout MODERN SPECIES 11 cnr2 (ENSOMYG00000036009) #8 akirin1 (ENSOMYG00000036028) #9 rhbdl2 (ENSOMYG00000036043) #10 GJA9 (ENSOMYG00000036049) #11 MYCBP (ENSOMYG00000036056) #12 rragca (ENSOMYG00000036070) #13 pou3f1 (ENSOMYG00000036081) #14 utp11 (ENSOMYG00000036096) #15 FHL3 (ENSOMYG00000036105) #16 rspo1 (ENSOMYG00000036112) #17 ENSOMYG00000074317 gnl2 (ENSOMYG00000036245) #18 ENSOMYG00000037484 #20 ENSOMYG00000047915 ENSOMYG00000037595 #21 MAP7D1 (ENSOMYG00000038006) #22 ENSOMYG00000038040 ENSOMYG00000050329 ENSOMYG00000038029 ENSOMYG00000063060 THRAP3 (ENSOMYG00000038051) #23 sh3d21 (ENSOMYG00000038065) #24 eva1ba (ENSOMYG00000055958) #25 STK40 (ENSOMYG00000038106) #26 ENSOMYG00000038134 ENSOMYG00000070784 ENSOMYG00000038157 mrps15 (ENSOMYG00000038191) #29 ENSOMYG00000054305 GRIK3 (ENSOMYG00000027368) #31 ZC3H12A (ENSOMYG00000031296) #32 Salmo ANCESTRAL SPECIES 1 ENSGT00940000154450.uc.c ENSGT00530000063881.a.b.t #7 ENSGT01060000248564.a.b.e #8 ENSGT00940000158787.g.b #9 ENSGT00940000159442.d #10 ENSGT01090000260070.C.a.c #11 ENSGT00980000199494.a.b ENSGT00950000183031.A.a.a.a.b #13 ENSGT00940000165372.d #14 ENSGT00390000005813.j #15 ENSGT00950000183028.a.b.a.f #16 ENSGT00940000158871.d #17 ENSGT00810000125524.d #18 ENSGT00940000156553.h #20 ENSGT00940000159398.c #21 ENSGT00950000182941.a.a.b.e.a.b.f #22 ENSGT00940000154063.C.a.a.b.j.b.b ENSGT00950000183163.a.a.ab.d #23 ENSGT00940000160627.l #24 ENSGT00990000211290.A ENSGT00940000154096.b.b.b.b.b.a #25 ENSGT00950000182986.b.c #26 ENSGT00390000004808.e.a #27 ENSGT00390000001737.o #29 ENSGT00940000158915.ab.b #30 ENSGT00940000159465.c.b.b #31 ENSGT00940000155107.a.a.a.b #32 ENSGT00990000203803.d #34 ENSGT00940000156762.j #35 ENSGT00940000157291.j.a #36 ENSGT00990000213494 River trout MODERN SPECIES 22 SRSF10 (ENSSTUG00000029650) pnrc2 (ENSSTUG00000029646) #7 cnr2 (ENSSTUG00000029643) #8 akirin1 (ENSSTUG00000029596) #9 rhbdl2 (ENSSTUG00000029559) #10 GJA9 (ENSSTUG00000029550) #11 ENSSTUG00000029536 rragca (ENSSTUG00000029518) #13 pou3f1 (ENSSTUG00000029513) #14 utp11 (ENSSTUG00000029502) #15 FHL3 (ENSSTUG00000029489) #16 rspo1 (ENSSTUG00000029480) #17 gnl2 (ENSSTUG00000029330) #18 SNIP1 (ENSSTUG00000029312) #20 ENSSTUG00000029010 #21 MAP7D1 (ENSSTUG00000028932) #22 ENSSTUG00000028926 fam177a1 (ENSSTUG00000028915) fam177a1 (ENSSTUG00000028906) ENSSTUG00000028899 ENSSTUG00000028878 THRAP3 (ENSSTUG00000028821) #23 sh3d21 (ENSSTUG00000028799) #24 eva1ba (ENSSTUG00000028783) #25 STK40 (ENSSTUG00000028762) #26 OSCP1 (ENSSTUG00000028650) #27 mrps15 (ENSSTUG00000028606) #29 ENSSTUG00000010809 GRIK3 (ENSSTUG00000008608) #31 ZC3H12A (ENSSTUG00000008510) #32 ENSSTUG00000008498 #34 Atlantic salmon MODERN SPECIES 24 pnrc2 (ENSSSAG00000100053) #7 cnr2 (ENSSSAG00000027960) #8 ENSSSAG00000084598 ca108 (ENSSSAG00000042312) #9 rhbdl2 (ENSSSAG00000116091) #10 GJA9 (ENSSSAG00000108800) #11 ENSSSAG00000107037 rragca (ENSSSAG00000042174) #13 utp11 (ENSSSAG00000042064) #15 FHL3 (ENSSSAG00000042046) #16 rspo1 (ENSSSAG00000112303) #17 gnl2 (ENSSSAG00000041915) dnali1 (ENSSSAG00000041885) #19 ENSSSAG00000041874 #20 ENSSSAG00000041598 #21 MAP7D1 (ENSSSAG00000041522) #22 ENSSSAG00000010394 ENSSSAG00000039686 ENSSSAG00000114956 THRAP3 (ENSSSAG00000039533) #23 sh3d21 (ENSSSAG00000041288) #24 ENSSSAG00000100766 CA078 (ENSSSAG00000039398) #25 STK40 (ENSSSAG00000039079) #26 OSCP1 (ENSSSAG00000038140) #27 mrps15 (ENSSSAG00000037592) #29 csf3r (ENSSSAG00000072535) #30 GRIK3 (ENSSSAG00000070593) #31 ENSSSAG00000091521 ZC3H12A (ENSSSAG00000070519) #32 ENSSSAG00000121662 #34 Huchen MODERN SPECIES 516 pou3f1 (ENSHHUG00000023677) #14 utp11 (ENSHHUG00000023669) #15 FHL3 (ENSHHUG00000023662) #16 rspo1 (ENSHHUG00000023657) #17 gnl2 (ENSHHUG00000023471) #18 ENSHHUG00000023458 SNIP1 (ENSHHUG00000023456) #20 MAP3K6 (ENSHHUG00000023393) #21 MAP7D1 (ENSHHUG00000023310) #22 ENSHHUG00000023305 THRAP3 (ENSHHUG00000023283) #23 sh3d21 (ENSHHUG00000023275) #24 eva1ba (ENSHHUG00000023251) #25 STK40 (ENSHHUG00000023245) #26 OSCP1 (ENSHHUG00000023235) #27 ENSHHUG00000023196 mrps15 (ENSHHUG00000023165) #29 Northern pike MODERN SPECIES 19 SRSF10 (ENSELUG00000017108) pnrc2 (ENSELUG00000017122) #7 cnr2 (ENSELUG00000017144) #8 rhbdl2 (ENSELUG00000017191) #10 GJA9 (ENSELUG00000017242) #11 ENSELUG00000025351 #12 rragca (ENSELUG00000017293) #13 pou3f1 (ENSELUG00000017309) #14 utp11 (ENSELUG00000017361) #15 FHL3 (ENSELUG00000000657) #16 rspo1 (ENSELUG00000017421) #17 gnl2 (ENSELUG00000000675) #18 dnali1 (ENSELUG00000000681) #19 SNIP1 (ENSELUG00000017487) #20 MAP3K6 (ENSELUG00000017546) #21 map7d1a (ENSELUG00000017646) #22 ENSELUG00000000703 ENSELUG00000017676 ENSELUG00000034553 THRAP3 (ENSELUG00000017733) #23 sh3d21 (ENSELUG00000017766) #24 eva1ba (ENSELUG00000017790) #25 STK40 (ENSELUG00000017831) #26 OSCP1 (ENSELUG00000017885) #27 PL8L1 (ENSELUG00000032488) mrps15 (ENSELUG00000017968) #29 smpdl3b (ENSELUG00000017994) mecr (ENSELUG00000018018) LIN28A (ENSELUG00000018033) MANEAL (ENSELUG00000018058) yrdc (ENSELUG00000018071) #37 Otomorpha ANCESTRAL SPECIES 109 ENSGT00940000159398 #21 ENSGT00950000182941.a.a.b.e.a.b #22 ENSGT00950000183163.a.a.ab #23 ENSGT00940000160627 #24 ENSGT00940000154096.b.b.b.b.b #25 ENSGT00950000182986.b #26 ENSGT00390000004808.e #27 ENSGT01030000235168 ENSGT00390000001737 #29 ENSGT00940000158915 #30 ENSGT00940000159465 #31 ENSGT00940000155107.a.a.a #32 ENSGT00990000203803 #34 ENSGT00940000156762 #35 ENSGT00940000157291 #36 ENSGT00390000015364.b #37 ENSGT00390000016054.b.i Otophysi ANCESTRAL SPECIES 56 ENSGT00940000157582.g ENSGT00950000183053.A.a.b ENSGT00940000157218.A ENSGT01030000234623.a.a.b.a ENSGT00990000203824 ENSGT01030000234597.b.a.b.c.b ENSGT00940000161438 ENSGT00940000157151.c ENSGT00940000164800 ENSGT00940000164873 ENSGT00390000002144 ENSGT00910000144179.b.b.o.a ENSGT00530000063624.C.b ENSGT00940000157999 ENSGT00940000159398 #21 ENSGT00950000182941.a.a.b.e.a.b #22 ENSGT00950000183163.a.a.ab #23 ENSGT00940000160627 #24 ENSGT00940000154096.b.b.b.b.b #25 ENSGT00950000182986.b #26 ENSGT00390000004808.e #27 ENSGT01030000235168 ENSGT00390000001737 #29 ENSGT00940000158915 #30 ENSGT00940000159465 #31 ENSGT00940000155107.a.a.a #32 ENSGT00990000203803 #34 ENSGT00940000156762 #35 ENSGT00940000157291 #36 ENSGT00390000015364.b #37 ENSGT00390000016054.b.i Characiphysae ANCESTRAL SPECIES ENSGT00940000157218.A ENSGT01030000234623.a.a.b.a ENSGT00990000203824 ENSGT01030000234597.b.a.b.c.b ENSGT00940000161438 ENSGT00940000157151.c ENSGT00940000178073 ENSGT00410000025596.a.b.a ENSGT00940000164800 ENSGT00940000164873 ENSGT00390000002144 ENSGT00910000144179.b.b.o.a ENSGT00530000063624.C.b ENSGT00940000157999 ENSGT00940000159398 #21 ENSGT00950000182941.a.a.b.e.a.b #22 ENSGT00950000183163.a.a.ab #23 ENSGT00940000160627 #24 ENSGT00940000154096.b.b.b.b.b #25 ENSGT00950000182986.b #26 ENSGT00390000004808.e #27 ENSGT01030000235168 ENSGT00390000001737 #29 ENSGT00940000158915 #30 ENSGT00940000159465 #31 ENSGT00940000155107.a.a.a #32 ENSGT00990000203803 #34 ENSGT00940000156762 #35 ENSGT00940000157291 #36 ENSGT00390000015364.b #37 ENSGT00390000016054.b.i Characiphysae_b ANCESTRAL SPECIES 2 ENSGT00940000157218.A ENSGT01030000234623.a.a.b.a ENSGT00990000203824 ENSGT01030000234597.b.a.b.c.b ENSGT00940000161438 ENSGT00940000157151.c ENSGT00940000178073 ENSGT00410000025596.a.b.a ENSGT00940000164800 ENSGT00940000164873 ENSGT00390000002144 ENSGT00910000144179.b.b.o.a ENSGT00530000063624.C.b ENSGT00940000157999 ENSGT00940000159398 #21 ENSGT00950000182941.a.a.b.e.a.b #22 ENSGT00950000183163.a.a.ab #23 ENSGT00940000160627 #24 ENSGT00940000154096.b.b.b.b.b #25 ENSGT00950000182986.b #26 ENSGT00390000004808.e #27 ENSGT01030000235168 ENSGT00390000001737 #29 ENSGT00940000158915 #30 ENSGT00940000159465 #31 ENSGT00940000155107.a.a.a #32 ENSGT00990000203803 #34 ENSGT00940000156762 #35 ENSGT00940000157291 #36 ENSGT00390000015364.b #37 ENSGT00390000016054.b.i Characoidei ANCESTRAL SPECIES 7 ENSGT00940000178073 ENSGT00410000025596.a.b.a ENSGT00940000164800 ENSGT00940000164873 ENSGT00390000002144 ENSGT00910000144179.b.b.o.a ENSGT00530000063624.C.b ENSGT00940000157999 ENSGT00940000159398 #21 ENSGT00950000182941.a.a.b.e.a.b #22 ENSGT00950000183163.a.a.ab #23 ENSGT00940000160627 #24 ENSGT00940000154096.b.b.b.b.b #25 ENSGT00950000182986.b #26 ENSGT00390000004808.e #27 ENSGT01030000235168 ENSGT00390000001737 #29 ENSGT00940000158915 #30 ENSGT00940000159465 #31 ENSGT00940000155107.a.a.a #32 ENSGT00990000203803 #34 ENSGT00940000156762 #35 ENSGT00940000157291 #36 ENSGT00390000015364.b #37 ENSGT00390000016054.b.i Red-bellied piranha MODERN SPECIES 138 rab42b (ENSPNAG00000014821) taf12 (ENSPNAG00000003268) ctps1b (ENSPNAG00000014866) cited4b (ENSPNAG00000003315) SCMH1 (ENSPNAG00000014937) MAP3K6 (ENSPNAG00000004700) #21 map7d1a (ENSPNAG00000003361) #22 THRAP3 (ENSPNAG00000015136) #23 sh3d21 (ENSPNAG00000015238) #24 eva1ba (ENSPNAG00000015261) #25 STK40 (ENSPNAG00000015317) #26 OSCP1 (ENSPNAG00000015372) #27 ENSPNAG00000015385 mrps15 (ENSPNAG00000015400) #29 csf3r (ENSPNAG00000015415) #30 GRIK3 (ENSPNAG00000003389) #31 ZC3H12A (ENSPNAG00000015494) #32 ENSPNAG00000015519 #34 INPP5B (ENSPNAG00000015577) #35 mtf1 (ENSPNAG00000015605) #36 yrdc (ENSPNAG00000015625) #37 MANEAL (ENSPNAG00000015638) Mexicana tetra MODERN SPECIES 1 prpf31 (ENSAMXG00000012329) ENSAMXG00000012311 leng1 (ENSAMXG00000012294) RSPO2 (ENSAMXG00000037389) eif3ea (ENSAMXG00000040417) emc2 (ENSAMXG00000039406) ENSAMXG00000040414 ENSAMXG00000032787 ENSAMXG00000001945 rab42b (ENSAMXG00000038342) taf12 (ENSAMXG00000042121) ctps1b (ENSAMXG00000001913) ENSAMXG00000034018 scmh1 (ENSAMXG00000036301) MAP3K6 (ENSAMXG00000001890) #21 map7d1a (ENSAMXG00000001876) #22 THRAP3 (ENSAMXG00000001863) #23 sh3d21 (ENSAMXG00000001850) #24 eva1ba (ENSAMXG00000041799) #25 STK40 (ENSAMXG00000029312) #26 OSCP1 (ENSAMXG00000042434) #27 ENSAMXG00000001798 mrps15 (ENSAMXG00000001781) #29 csf3r (ENSAMXG00000001766) #30 GRIK3 (ENSAMXG00000001749) #31 ENSAMXG00000031100 ENSAMXG00000042004 ZC3H12A (ENSAMXG00000001736) #32 ENSAMXG00000034489 #34 ENSAMXG00000037974 INPP5B (ENSAMXG00000001691) #35 Electric eel MODERN SPECIES 52 HIVEP3 (ENSEEEG00000006754) SERINC2 (ENSEEEG00000006747) ENSEEEG00000006746 ENSEEEG00000006744 paqr7b (ENSEEEG00000006743) ptprub (ENSEEEG00000006734) ENSEEEG00000006731 rab42b (ENSEEEG00000006729) taf12 (ENSEEEG00000006728) ctps1b (ENSEEEG00000006717) cited4b (ENSEEEG00000006711) ENSEEEG00000006710 ENSEEEG00000006709 scmh1 (ENSEEEG00000006708) MAP3K6 (ENSEEEG00000006701) #21 map7d1a (ENSEEEG00000006695) #22 ENSEEEG00000006694 #23 sh3d21 (ENSEEEG00000006689) #24 eva1ba (ENSEEEG00000006686) #25 nsun5 (ENSEEEG00000006685) ripk4 (ENSEEEG00000006681) zgc:110006 (ENSEEEG00000006680) SUPT20H (ENSEEEG00000006261) exosc8 (ENSEEEG00000006234) alg5 (ENSEEEG00000006226) ENSEEEG00000006222 rfxap (ENSEEEG00000006221) SERTM1 (ENSEEEG00000006219) ccna1 (ENSEEEG00000006207) sparta (ENSEEEG00000006205) ENSEEEG00000006204 Channel catfish MODERN SPECIES cyp4t8 (ENSIPUG00000014649) Ppp1r8 (ENSIPUG00000014723) themis2 (ENSIPUG00000014758) Rpa2 (ENSIPUG00000014790) smpdl3b (ENSIPUG00000014863) mecr (ENSIPUG00000014921) LIN28A (ENSIPUG00000014952) ENSIPUG00000014960 MANEAL (ENSIPUG00000014973) yrdc (ENSIPUG00000014985) #37 Mtf1 (ENSIPUG00000015020) #36 inpp5b (ENSIPUG00000015075) #35 ENSIPUG00000015128 #34 Zc3h12a (ENSIPUG00000015158) #32 GRIK3 (ENSIPUG00000015183) #31 map7d1 (ENSIPUG00000015269) #22 THRAP3 (ENSIPUG00000015339) #23 Cd2ap (ENSIPUG00000015399) #24 Eva1b (ENSIPUG00000015458) #25 stk40 (ENSIPUG00000015473) #26 Oscp1 (ENSIPUG00000015510) #27 pl8l1 (ENSIPUG00000015558) mrps15 (ENSIPUG00000015599) #29 csf3r (ENSIPUG00000015617) #30 ENSIPUG00000015639 #21 SCMH1 (ENSIPUG00000015680) CITED3 (ENSIPUG00000015725) ctps1b (ENSIPUG00000015748) taf12 (ENSIPUG00000015799) RAB39B (ENSIPUG00000015874) ENSIPUG00000015908 Cyprinoidei ANCESTRAL SPECIES 60 ENSGT00940000157218.A ENSGT01030000234623.a.a.b.a ENSGT00990000203824 ENSGT01030000234597.b.a.b.c.a ENSGT01030000234597.b.a.b.c.b ENSGT00940000161438 ENSGT00940000157151.c ENSGT00940000164800 ENSGT00940000164873.f ENSGT00940000164873.e ENSGT00390000002144 ENSGT00910000144179.b.b.o.a ENSGT00530000063624.C.b ENSGT00940000157999 ENSGT00940000159398 #21 ENSGT00950000182941.a.a.b.e.a.b #22 ENSGT00950000183163.a.a.ab #23 ENSGT00940000160627 #24 ENSGT00940000154096.b.b.b.b.b #25 ENSGT00950000182986.b #26 ENSGT00390000004808.e #27 ENSGT01030000235168 ENSGT00390000001737 #29 ENSGT00390000018500.b.b.a ENSGT00940000155892 ENSGT00940000155619.j.a ENSGT01030000235403 ENSGT01030000235163 ENSGT00390000016225 ENSGT00940000153801.b ENSGT00950000183108.b.a.b Cyprininae DUPLICATION Cyprininae ANCESTRAL SPECIES 28 ENSGT00940000157218.A.b ENSGT01030000234623.a.a.b.a.e ENSGT00990000203824.b ENSGT01030000234597.b.a.b.c.b ENSGT00940000161438.c ENSGT00940000157151.c.b ENSGT00940000164800.c ENSGT00940000164873.f ENSGT00390000002144.gb ENSGT00940000164873.e.a ENSGT00390000002144.fb.a ENSGT00910000144179.b.b.o.a.d ENSGT00530000063624.C.b.h ENSGT00940000157999.z ENSGT00940000159398.e #21 ENSGT00950000182941.a.a.b.e.a.b.a #22 ENSGT00950000183163.a.a.ab.b #23 ENSGT00940000160627.i #24 ENSGT00940000154096.b.b.b.b.b.d #25 ENSGT00950000182986.b.a #26 ENSGT00390000004808.e.d #27 ENSGT01030000235168.a ENSGT00390000001737.r #29 ENSGT00390000018500.b.b.a.b ENSGT00940000155892.f ENSGT00940000155619.j.a.c ENSGT00390000016225.l ENSGT00940000153801.b.l ENSGT00950000183108.b.a.b.d ENSGT00950000182991.A.a.c.a.b.f ENSGT00390000014242.l.a Goldfish MODERN SPECIES 7 akirin1 (ENSCARG00000012946) #9 rhbdl2 (ENSCARG00000012940) #10 GJA9 (ENSCARG00000012937) #11 rragca (ENSCARG00000012929) #13 pou3f1 (ENSCARG00000012924) #14 utp11 (ENSCARG00000012919) #15 FHL3 (ENSCARG00000012912) #16 ptprub (ENSCARG00000009039) ENSCARG00000008863 rab42b (ENSCARG00000008855) taf12 (ENSCARG00000008850) ctps1b (ENSCARG00000008731) cited4b (ENSCARG00000008702) SCMH1 (ENSCARG00000008621) ENSCARG00000007670 #21 map7d1a (ENSCARG00000007511) #22 THRAP3 (ENSCARG00000007470) #23 sh3d21 (ENSCARG00000007452) #24 eva1ba (ENSCARG00000007440) #25 STK40 (ENSCARG00000007427) #26 OSCP1 (ENSCARG00000007397) #27 ENSCARG00000007365 mrps15 (ENSCARG00000007353) #29 sh3bp5b (ENSCARG00000007340) capn7 (ENSCARG00000007054) ENSCARG00000006998 PIK3R4 (ENSCARG00000006883) decr1 (ENSCARG00000006829) CALB1 (ENSCARG00000006811) pnp4b (ENSCARG00000006776) TDP2 (ENSCARG00000006763) Cyprininae_a ANCESTRAL SPECIES 7 ENSGT00940000157218.A.b ENSGT01030000234623.a.a.b.a.e ENSGT00990000203824.b ENSGT01030000234597.b.a.b.c.b ENSGT00940000161438.c ENSGT00940000157151.c.b ENSGT00940000164800.c ENSGT00940000164873.f ENSGT00390000002144.gb ENSGT00940000164873.e.a ENSGT00390000002144.fb.a ENSGT00910000144179.b.b.o.a.d ENSGT00530000063624.C.b.h ENSGT00940000157999.z ENSGT00940000159398.e #21 ENSGT00950000182941.a.a.b.e.a.b.a #22 ENSGT00950000183163.a.a.ab.b #23 ENSGT00940000160627.i #24 ENSGT00940000154096.b.b.b.b.b.d #25 ENSGT00950000182986.b.a #26 ENSGT00390000004808.e.d #27 ENSGT01030000235168.a ENSGT00390000001737.r #29 ENSGT00390000018500.b.b.a.b ENSGT00940000155892.f ENSGT00940000155619.j.a.c ENSGT00390000016225.l ENSGT00940000153801.b.l ENSGT00950000183108.b.a.b.d ENSGT00950000182991.A.a.c.a.b.f ENSGT00390000014242.l.a Common carp reference MODERN SPECIES 47 ENSCCRG00000012340 ENSCCRG00000061507 ENSCCRG00000046953 ENSCCRG00000076374 ENSCCRG00000057025 paqr7b (ENSCCRG00000081087) ptprub (ENSCCRG00000031387) ENSCCRG00000002646 si:dkey-34d22.2 (ENSCCRG00000046399) taf12 (ENSCCRG00000058395) rab42b (ENSCCRG00000073740) ctps1b (ENSCCRG00000006972) cited4b (ENSCCRG00000065553) ENSCCRG00000006980 ENSCCRG00000006540 #21 map7d1a (ENSCCRG00000065527) #22 THRAP3 (ENSCCRG00000051496) #23 sh3d21 (ENSCCRG00000051498) #24 eva1ba (ENSCCRG00000065911) #25 STK40 (ENSCCRG00000015578) #26 OSCP1 (ENSCCRG00000073652) #27 mrps15 (ENSCCRG00000006421) #29 sh3bp5b (ENSCCRG00000006451) capn7 (ENSCCRG00000005977) ENSCCRG00000007312 ENSCCRG00000003522 decr1 (ENSCCRG00000078230) ENSCCRG00000003497 pnp4b (ENSCCRG00000081736) ENSCCRG00000033400 ENSCCRG00000002659 Golden-line barbel MODERN SPECIES 103 paqr7b (ENSSGRG00000018604) ptprub (ENSSGRG00000014465) ENSSGRG00000014379 rab42b (ENSSGRG00000014377) taf12 (ENSSGRG00000014368) ctps1b (ENSSGRG00000013262) cited4b (ENSSGRG00000013241) SCMH1 (ENSSGRG00000013239) MAP3K6 (ENSSGRG00000013042) #21 map7d1a (ENSSGRG00000013019) #22 THRAP3 (ENSSGRG00000013014) #23 ENSSGRG00000013011 sh3d21 (ENSSGRG00000013008) #24 eva1ba (ENSSGRG00000013005) #25 STK40 (ENSSGRG00000012994) #26 OSCP1 (ENSSGRG00000012853) #27 ENSSGRG00000012851 mrps15 (ENSSGRG00000012849) #29 sh3bp5b (ENSSGRG00000012848) capn7 (ENSSGRG00000012741) ENSSGRG00000012740 ENSSGRG00000012737 PIK3R4 (ENSSGRG00000011694) decr1 (ENSSGRG00000011623) ENSSGRG00000011622 Cyprininae ANCESTRAL SPECIES 99 ENSGT00940000157582.g.b ENSGT00950000183053.A.a.b.c ENSGT00940000157218.A.a ENSGT01030000234623.a.a.b.a.f ENSGT00990000203824.a ENSGT01030000234597.b.a.b.c.a ENSGT00940000161438.d ENSGT00940000157151.c.a ENSGT00940000164800.d ENSGT00940000164873.e.b ENSGT00390000002144.fb.b ENSGT00910000144179.b.b.o.a.c ENSGT00530000063624.C.b.g ENSGT00940000157999.`b ENSGT00940000159398.f #21 ENSGT00950000182941.a.a.b.e.a.b.b #22 ENSGT00950000183163.a.a.ab.a #23 ENSGT00940000160627.j #24 ENSGT00940000154096.b.b.b.b.b.c #25 ENSGT00950000182986.b.b #26 ENSGT00390000004808.e.c #27 ENSGT01030000235168.b ENSGT00390000001737.q #29 ENSGT00390000018500.b.b.a.a ENSGT00940000155892.e ENSGT00940000155619.j.a.d ENSGT01030000235403 ENSGT01030000235163 ENSGT00390000016225.k ENSGT00940000153801.b.k.b ENSGT00940000158130.i.b Goldfish MODERN SPECIES 35 trmt11 (ENSCARG00000054211) ENSCARG00000054317 hint3 (ENSCARG00000054332) rbms3 (ENSCARG00000054410) TGFBR2 (ENSCARG00000055298) ENSCARG00000055375 ENSCARG00000055400 ENSCARG00000055444 rab42b (ENSCARG00000055462) taf12 (ENSCARG00000055487) ctps1b (ENSCARG00000055537) ENSCARG00000055671 cited4b (ENSCARG00000049988) SCMH1 (ENSCARG00000050008) MAP3K6 (ENSCARG00000050052) #21 map7d1a (ENSCARG00000050150) #22 ENSCARG00000050384 THRAP3 (ENSCARG00000050399) #23 sh3d21 (ENSCARG00000050454) #24 eva1ba (ENSCARG00000050535) #25 STK40 (ENSCARG00000050551) #26 OSCP1 (ENSCARG00000050573) #27 mrps15 (ENSCARG00000050614) #29 sh3bp5b (ENSCARG00000050652) capn7 (ENSCARG00000050670) ENSCARG00000050729 dpy19l1l (ENSCARG00000050759) SLC4A7 (ENSCARG00000051769) ANKRD34A (ENSCARG00000054557) txnipb (ENSCARG00000054570) ENSCARG00000054580 Cyprininae_a ANCESTRAL SPECIES 192 ENSGT00940000157151.c.a ENSGT00940000164800.d ENSGT00940000164873.e.b ENSGT00390000002144.fb.b ENSGT00910000144179.b.b.o.a.c ENSGT00530000063624.C.b.g ENSGT00940000157999.`b ENSGT00940000159398.f #21 ENSGT00950000182941.a.a.b.e.a.b.b #22 ENSGT00950000183163.a.a.ab.a #23 ENSGT00940000160627.j #24 ENSGT00940000154096.b.b.b.b.b.c #25 ENSGT00950000182986.b.b #26 ENSGT00390000004808.e.c #27 ENSGT01030000235168.b ENSGT00390000001737.q #29 ENSGT00390000018500.b.b.a.a ENSGT00940000155892.e ENSGT00940000155619.j.a.d ENSGT01030000235403 ENSGT01030000235163 ENSGT00390000016225.k ENSGT00940000153801.b.k.a ENSGT00950000183108.b.a.b.c Common carp reference MODERN SPECIES 2 phactr4b (ENSCCRG00000012094) ENSCCRG00000005202 ENSCCRG00000012346 ENSCCRG00000012366 ENSCCRG00000065016 stmn1b (ENSCCRG00000010471) paqr7b (ENSCCRG00000067636) ptprub (ENSCCRG00000011143) ENSCCRG00000031270 rab42b (ENSCCRG00000006957) ctps1b (ENSCCRG00000053678) ENSCCRG00000054658 cited4b (ENSCCRG00000077681) ENSCCRG00000080902 ENSCCRG00000007359 #21 map7d1a (ENSCCRG00000006475) #22 THRAP3 (ENSCCRG00000008262) #23 sh3d21 (ENSCCRG00000008250) #24 eva1ba (ENSCCRG00000080956) #25 STK40 (ENSCCRG00000053931) #26 OSCP1 (ENSCCRG00000015603) #27 mrps15 (ENSCCRG00000015732) #29 sh3bp5b (ENSCCRG00000015738) capn7 (ENSCCRG00000015763) ENSCCRG00000002746 ENSCCRG00000037667 decr1 (ENSCCRG00000057184) ENSCCRG00000037627 pnp4b (ENSCCRG00000055203) ENSCCRG00000002479 ENSCCRG00000053628 Golden-line barbel MODERN SPECIES 554 SCMH1 (ENSSGRG00000033634) MAP3K6 (ENSSGRG00000033642) #21 map7d1a (ENSSGRG00000034182) #22 THRAP3 (ENSSGRG00000034193) #23 sh3d21 (ENSSGRG00000034198) #24 eva1ba (ENSSGRG00000034201) #25 STK40 (ENSSGRG00000034202) #26 OSCP1 (ENSSGRG00000034217) #27 OSCP1 (ENSSGRG00000034218) #27 ENSSGRG00000034219 mrps15 (ENSSGRG00000034224) #29 sh3bp5b (ENSSGRG00000034229) capn7 (ENSSGRG00000034342) ENSSGRG00000034891 ENSSGRG00000034893 ENSSGRG00000034894 PIK3R4 (ENSSGRG00000034920) decr1 (ENSSGRG00000036119) Zebrafish MODERN SPECIES 7 SERINC2 (ENSDARG00000053425) ENSDARG00000095152 paqr7b (ENSDARG00000034907) stmn1b (ENSDARG00000033655) ptprub (ENSDARG00000101081) ENSDARG00000103181 si:dkey-34d22.2 (ENSDARG00000100379) ENSDARG00000101352 ENSDARG00000104865 rab42b (ENSDARG00000101170) taf12 (ENSDARG00000104030) ctps1b (ENSDARG00000098386) cited4b (ENSDARG00000101009) scmh1 (ENSDARG00000104311) ENSDARG00000104760 #21 map7d1a (ENSDARG00000098802) #22 THRAP3 (ENSDARG00000101989) #23 sh3d21 (ENSDARG00000099448) #24 eva1ba (ENSDARG00000102701) #25 STK40 (ENSDARG00000098135) #26 OSCP1 (ENSDARG00000101888) #27 mrps15 (ENSDARG00000109289) #29 ENSDARG00000114387 sh3bp5b (ENSDARG00000103978) capn7 (ENSDARG00000102987) ENSDARG00000079752 PIK3R4 (ENSDARG00000060469) decr1 (ENSDARG00000003869) CALB1 (ENSDARG00000031598) ENSDARG00000103001 pnp4b (ENSDARG00000029230) Clupeiformes ANCESTRAL SPECIES ENSGT00530000063881.a.b #7 ENSGT01060000248564.a.b #8 ENSGT00940000158787 #9 ENSGT00940000159442 #10 ENSGT01090000260070.C.a #11 ENSGT00950000183031.A.a.a #13 ENSGT00940000165372 #14 ENSGT00390000005813 #15 ENSGT00950000183028.a.b.a #16 ENSGT00390000015257.c ENSGT00390000003012 #19 ENSGT00810000125524 #18 ENSGT00940000158871 #17 ENSGT00940000156553 #20 ENSGT00940000159398 #21 ENSGT00950000182941.a.a.b.e.a.b #22 ENSGT00950000183163.a.a.ab #23 ENSGT00940000160627 #24 ENSGT00940000154096.b.b.b.b.b #25 ENSGT00950000182986.b #26 ENSGT00390000004808.e #27 ENSGT00390000001737 #29 ENSGT00940000158915 #30 ENSGT00940000159465 #31 ENSGT00940000155107.a.a.a #32 ENSGT00990000203803 #34 ENSGT00940000156762 #35 ENSGT00940000157291 #36 ENSGT00390000015364.b #37 ENSGT00390000016054.b.i ENSGT00940000153295.a.a Denticle herring MODERN SPECIES 15 ENSDCDG00000014733 cyb5r4 (ENSDCDG00000014749) sim1a (ENSDCDG00000014778) ASCC3 (ENSDCDG00000014836) GRIK2 (ENSDCDG00000014913) ENSDCDG00000016058 ENSDCDG00000016059 HACE1 (ENSDCDG00000016081) LIN28B (ENSDCDG00000016121) bves (ENSDCDG00000016159) popdc3 (ENSDCDG00000016167) ENSDCDG00000016171 ENSDCDG00000016180 SNIP1 (ENSDCDG00000016195) #20 MAP3K6 (ENSDCDG00000016278) #21 map7d1a (ENSDCDG00000016562) #22 THRAP3 (ENSDCDG00000016601) #23 sh3d21 (ENSDCDG00000016619) #24 eva1ba (ENSDCDG00000016622) #25 STK40 (ENSDCDG00000016626) #26 OSCP1 (ENSDCDG00000016632) #27 mrps15 (ENSDCDG00000016644) #29 csf3r (ENSDCDG00000016649) #30 ENSDCDG00000016659 GRIK3 (ENSDCDG00000016667) #31 ZC3H12A (ENSDCDG00000016680) #32 ENSDCDG00000016681 #34 INPP5B (ENSDCDG00000016709) #35 mtf1 (ENSDCDG00000017280) #36 yrdc (ENSDCDG00000017420) #37 MANEAL (ENSDCDG00000017425) Atlantic herring MODERN SPECIES 2 cnr2 (ENSCHAG00000016500) #8 akirin1 (ENSCHAG00000016529) #9 rhbdl2 (ENSCHAG00000016567) #10 pou3f1 (ENSCHAG00000016607) #14 utp11 (ENSCHAG00000016611) #15 FHL3 (ENSCHAG00000016623) #16 MEAF6 (ENSCHAG00000016643) ENSCHAG00000016660 dnali1 (ENSCHAG00000016663) #19 gnl2 (ENSCHAG00000016691) #18 ENSCHAG00000016810 ENSCHAG00000016824 rspo1 (ENSCHAG00000016833) #17 snip1 (ENSCHAG00000016834) MAP3K6 (ENSCHAG00000016845) #21 map7d1a (ENSCHAG00000017603) #22 THRAP3 (ENSCHAG00000017660) #23 sh3d21 (ENSCHAG00000017676) #24 eva1ba (ENSCHAG00000017699) #25 STK40 (ENSCHAG00000017718) #26 OSCP1 (ENSCHAG00000017793) #27 mrps15 (ENSCHAG00000017903) #29 ENSCHAG00000017916 ENSCHAG00000017931 csf3r (ENSCHAG00000017945) #30 GRIK3 (ENSCHAG00000018120) #31 ZC3H12A (ENSCHAG00000020414) #32 ENSCHAG00000000349 #34 INPP5B (ENSCHAG00000001030) #35 mtf1 (ENSCHAG00000002640) #36 yrdc (ENSCHAG00000002890) #37 Clupeocephala DUPLICATION Clupeocephala ANCESTRAL SPECIES ENSGT00950000182941.a.a.b.e.a.a.a ##22 Otomorpha ANCESTRAL SPECIES ENSGT00950000182941.a.a.b.e.a.a.a ##22 Otophysi DUPLICATION Otophysi ANCESTRAL SPECIES ENSGT00950000182941.a.a.b.e.a.a.a.a ##22 Cyprinoidei ANCESTRAL SPECIES ENSGT00950000182941.a.a.b.e.a.a.a.a ##22 Zebrafish DUPLICATION Zebrafish MODERN SPECIES 10 ENSDARG00000103106 TRAPPC9 (ENSDARG00000099118) rragcb (ENSDARG00000099049) #13 fhl3b (ENSDARG00000104315) ##16 ENSDARG00000100909 ENSDARG00000105241 btr25 (ENSDARG00000102018) ENSDARG00000102143 ENSDARG00000099509 meaf6 (ENSDARG00000101216) stpg1 (ENSDARG00000103765) ENSDARG00000113654 map7d1b (ENSDARG00000104701) ##22 ENSDARG00000101490 ##22 ENSDARG00000103395 ##22 ENSDARG00000102533 ##22 ENSDARG00000089402 ##22 thrap3b (ENSDARG00000098228) ##23 eva1bb (ENSDARG00000100698) ##25 LSM10 (ENSDARG00000101222) oscp1a (ENSDARG00000104403) ##27 zc3h12ab (ENSDARG00000101034) ##32 ENSDARG00000100046 ENSDARG00000105283 ENSDARG00000102913 ENSDARG00000102992 ENSDARG00000100450 btr18 (ENSDARG00000103618) ENSDARG00000100539 ENSDARG00000112881 smim13 (ENSDARG00000089204) Zebrafish MODERN SPECIES 10 TRAPPC9 (ENSDARG00000099118) rragcb (ENSDARG00000099049) #13 fhl3b (ENSDARG00000104315) ##16 ENSDARG00000100909 ENSDARG00000105241 btr25 (ENSDARG00000102018) ENSDARG00000102143 ENSDARG00000099509 meaf6 (ENSDARG00000101216) stpg1 (ENSDARG00000103765) ENSDARG00000113654 map7d1b (ENSDARG00000104701) ##22 ENSDARG00000101490 ##22 ENSDARG00000103395 ##22 ENSDARG00000102533 ##22 ENSDARG00000089402 ##22 thrap3b (ENSDARG00000098228) ##23 eva1bb (ENSDARG00000100698) ##25 LSM10 (ENSDARG00000101222) oscp1a (ENSDARG00000104403) ##27 zc3h12ab (ENSDARG00000101034) ##32 ENSDARG00000100046 ENSDARG00000105283 ENSDARG00000102913 ENSDARG00000102992 ENSDARG00000100450 btr18 (ENSDARG00000103618) ENSDARG00000100539 ENSDARG00000112881 smim13 (ENSDARG00000089204) nedd9 (ENSDARG00000089878) Characiphysae ANCESTRAL SPECIES ENSGT00950000182941.a.a.b.e.a.a.a.a ##22 Characiphysae_b ANCESTRAL SPECIES ENSGT00950000182941.a.a.b.e.a.a.a.a ##22 Characoidei ANCESTRAL SPECIES ENSGT00950000182941.a.a.b.e.a.a.a.a ##22 Mexicana tetra MODERN SPECIES 6 ddx19a (ENSAMXG00000015325) ENSAMXG00000034791 VWA5B1 (ENSAMXG00000032840) CAMK2N1 (ENSAMXG00000032815) mul1b (ENSAMXG00000036074) fam43b (ENSAMXG00000024828) ENSAMXG00000008981 ENSAMXG00000042708 cdaa (ENSAMXG00000034539) pink1 (ENSAMXG00000038123) agmat (ENSAMXG00000030343) DNAJC16 (ENSAMXG00000018083) iyd (ENSAMXG00000030031) selenoi (ENSAMXG00000042381) ppp1r14c (ENSAMXG00000037953) ENSAMXG00000041374 ##22 ENSAMXG00000025984 ENSAMXG00000038595 cyp17a2 (ENSAMXG00000043927) egr4 (ENSAMXG00000030340) ENSAMXG00000034155 DCLK2 (ENSAMXG00000040052) ENSAMXG00000036777 FHIP1A (ENSAMXG00000004939) ENSAMXG00000004935 ENSAMXG00000043047 cptp (ENSAMXG00000004933) ints11 (ENSAMXG00000038758) ENSAMXG00000041584 ACAP3 (ENSAMXG00000004927) ube2j2 (ENSAMXG00000004921) Otophysi ANCESTRAL SPECIES ENSGT00950000182941.a.a.b.e.a.a.a.b ##22 Cyprinoidei ANCESTRAL SPECIES ENSGT00950000182941.a.a.b.e.a.a.a.b ##22 Zebrafish DUPLICATION Zebrafish MODERN SPECIES 10 kcnk9 (ENSDARG00000104563) ENSDARG00000103106 TRAPPC9 (ENSDARG00000099118) rragcb (ENSDARG00000099049) #13 fhl3b (ENSDARG00000104315) ##16 ENSDARG00000100909 ENSDARG00000105241 btr25 (ENSDARG00000102018) ENSDARG00000102143 ENSDARG00000099509 meaf6 (ENSDARG00000101216) stpg1 (ENSDARG00000103765) ENSDARG00000113654 map7d1b (ENSDARG00000104701) ##22 ENSDARG00000101490 ##22 ENSDARG00000103395 ##22 ENSDARG00000102533 ##22 ENSDARG00000089402 ##22 thrap3b (ENSDARG00000098228) ##23 eva1bb (ENSDARG00000100698) ##25 LSM10 (ENSDARG00000101222) oscp1a (ENSDARG00000104403) ##27 zc3h12ab (ENSDARG00000101034) ##32 ENSDARG00000100046 ENSDARG00000105283 ENSDARG00000102913 ENSDARG00000102992 ENSDARG00000100450 btr18 (ENSDARG00000103618) ENSDARG00000100539 ENSDARG00000112881 Zebrafish MODERN SPECIES 10 ENSDARG00000079654 kcnk9 (ENSDARG00000104563) ENSDARG00000103106 TRAPPC9 (ENSDARG00000099118) rragcb (ENSDARG00000099049) #13 fhl3b (ENSDARG00000104315) ##16 ENSDARG00000100909 ENSDARG00000105241 btr25 (ENSDARG00000102018) ENSDARG00000102143 ENSDARG00000099509 meaf6 (ENSDARG00000101216) stpg1 (ENSDARG00000103765) ENSDARG00000113654 map7d1b (ENSDARG00000104701) ##22 ENSDARG00000101490 ##22 ENSDARG00000103395 ##22 ENSDARG00000102533 ##22 ENSDARG00000089402 ##22 thrap3b (ENSDARG00000098228) ##23 eva1bb (ENSDARG00000100698) ##25 LSM10 (ENSDARG00000101222) oscp1a (ENSDARG00000104403) ##27 zc3h12ab (ENSDARG00000101034) ##32 ENSDARG00000100046 ENSDARG00000105283 ENSDARG00000102913 ENSDARG00000102992 ENSDARG00000100450 btr18 (ENSDARG00000103618) ENSDARG00000100539 Euteleosteomorpha ANCESTRAL SPECIES ENSGT00950000182941.a.a.b.e.a.a.a ##22 Acanthomorphata ANCESTRAL SPECIES ENSGT00950000182941.a.a.b.e.a.a.a ##22 Cod MODERN SPECIES 18 ENSGMOG00000025618 ENSGMOG00000027948 gja10a (ENSGMOG00000002098) ##11 ENSGMOG00000029715 ENSGMOG00000030418 ENSGMOG00000036440 ENSGMOG00000001776 ENSGMOG00000031697 ENSGMOG00000029140 ENSGMOG00000028769 ENSGMOG00000030873 ENSGMOG00000019348 ENSGMOG00000027382 ENSGMOG00000029480 ENSGMOG00000019382 ENSGMOG00000029632 ##22 ENSGMOG00000033270 ahi1 (ENSGMOG00000019402) slc18b1 (ENSGMOG00000028735) slc18b1 (ENSGMOG00000030233) slc18b1 (ENSGMOG00000019410) ENSGMOG00000019415 ENSGMOG00000023735 ENSGMOG00000019433 rmnd1 (ENSGMOG00000019502) ENSGMOG00000033787 stx11a (ENSGMOG00000034568) fbxo30a (ENSGMOG00000025323) ENSGMOG00000026983 ENSGMOG00000016082 ENSGMOG00000034655 Clupeocephala ANCESTRAL SPECIES ENSGT00950000182941.a.a.b.e.a.a.b ##22 Euteleosteomorpha ANCESTRAL SPECIES ENSGT00950000182941.a.a.b.e.a.a.b ##22 Acanthomorphata ANCESTRAL SPECIES ENSGT00950000182941.a.a.b.e.a.a.b ##22 Cod MODERN SPECIES 19 ENSGMOG00000025532 ENSGMOG00000022940 ENSGMOG00000033659 ENSGMOG00000029166 ENSGMOG00000028407 etfb (ENSGMOG00000009792) ENSGMOG00000023830 ENSGMOG00000031015 iglon5 (ENSGMOG00000030867) ENSGMOG00000024736 ENSGMOG00000023507 ENSGMOG00000019418 ago1 (ENSGMOG00000019413) dhdds (ENSGMOG00000001113) ENSGMOG00000025369 MAP7D1 (ENSGMOG00000024856) ##22 ENSGMOG00000035895 #23 ENSGMOG00000006557 #24 eva1ba (ENSGMOG00000033967) #25 hint3 (ENSGMOG00000006588) ENSGMOG00000034923 trmt11 (ENSGMOG00000006618) RNF146 (ENSGMOG00000035264) tent5ba (ENSGMOG00000019728) zdhhc18a (ENSGMOG00000001179) pigv (ENSGMOG00000001161) ARID1A (ENSGMOG00000001024) gpn2 (ENSGMOG00000001010) GPATCH3 (ENSGMOG00000000991) nr0b2a (ENSGMOG00000000984) ENSGMOG00000024982 Osteoglossiformes ANCESTRAL SPECIES 101 ENSGT00940000158787 #9 ENSGT00940000159442 #10 ENSGT01030000235133 ENSGT01090000260070.C.a #11 ENSGT00390000017974.nb #12 ENSGT00950000183031.A.a.a #13 ENSGT00940000165372 #14 ENSGT00390000005813 #15 ENSGT00950000183028.a.b.a #16 ENSGT00390000015257 ENSGT00940000158871 #17 ENSGT00810000125524 #18 ENSGT00390000003012 #19 ENSGT00940000156553 #20 ENSGT00940000159398 #21 ENSGT00950000182941.a.a.b.e.a #22 ENSGT00950000183163.a.a.ab #23 ENSGT00940000160627 #24 ENSGT00940000154096.b.b.b.b.b #25 ENSGT00950000182986.b #26 ENSGT00390000004808.e #27 ENSGT01030000235168 ENSGT00390000001737 #29 ENSGT00940000158915 #30 ENSGT00940000159465 #31 ENSGT00940000155107.a.a #32 ENSGT00530000063402.a ENSGT00940000156762 #35 ENSGT00940000157291 #36 ENSGT00390000015364.b #37 ENSGT00390000016054.b P. kingsleyae MODERN SPECIES 185 meaf6 (ENSPKIG00000005531) rspo1 (ENSPKIG00000005509) #17 gnl2 (ENSPKIG00000005438) #18 dnali1 (ENSPKIG00000005377) #19 SNIP1 (ENSPKIG00000005359) #20 ENSPKIG00000005338 #21 map7d1a (ENSPKIG00000005222) #22 THRAP3 (ENSPKIG00000005150) #23 sh3d21 (ENSPKIG00000005110) #24 eva1ba (ENSPKIG00000005092) #25 STK40 (ENSPKIG00000005059) #26 OSCP1 (ENSPKIG00000004997) #27 ENSPKIG00000004957 mrps15 (ENSPKIG00000004939) #29 csf3r (ENSPKIG00000004855) #30 GRIK3 (ENSPKIG00000004789) #31 zc3h12ab (ENSPKIG00000004769) #32 sf3a3 (ENSPKIG00000004719) INPP5B (ENSPKIG00000004669) #35 mtf1 (ENSPKIG00000004616) #36 yrdc (ENSPKIG00000004574) #37 maneal (ENSPKIG00000004548) Asian bonytongue MODERN SPECIES 9 akirin1 (ENSSFOG00015020545) #9 rhbdl2 (ENSSFOG00015020519) #10 GJA9 (ENSSFOG00015020499) #11 MYCBP (ENSSFOG00015020481) #12 rragca (ENSSFOG00015020466) #13 pou3f1 (ENSSFOG00015029682) #14 utp11 (ENSSFOG00015020388) #15 FHL3 (ENSSFOG00015020369) #16 meaf6 (ENSSFOG00015020331) rspo1 (ENSSFOG00015020311) #17 gnl2 (ENSSFOG00015020300) #18 dnali1 (ENSSFOG00015020284) #19 dnali1 (ENSSFOG00015020255) #19 SNIP1 (ENSSFOG00015020244) #20 ENSSFOG00015020153 #21 map7d1a (ENSSFOG00015020090) #22 ENSSFOG00015020057 #23 sh3d21 (ENSSFOG00015020035) #24 ENSSFOG00015020021 ENSSFOG00015020010 lim2.5 (ENSSFOG00015019992) ENSSFOG00015032389 ENSSFOG00015019971 ENSSFOG00015019955 xrcc1 (ENSSFOG00015019923) drd2l (ENSSFOG00015019901) ENSSFOG00015019876 ethe1 (ENSSFOG00015019848) ENSSFOG00015019826 si:dkey-211g8.1 (ENSSFOG00015019812) ENSSFOG00015019774 Osteoglossocephalai ANCESTRAL SPECIES 119 ENSGT01090000260070.C.b ##11 ENSGT00390000017974.ob ##12 ENSGT00950000183028.a.b.b ##16 ENSGT00390000015257 ENSGT00390000011598 ENSGT00950000182941.a.a.b.e.b ##22 ENSGT01050000246199 ENSGT00560000078630 ENSGT00950000183008.a.a.a.b ENSGT00940000160424 ENSGT00940000158242 ENSGT00950000183053.D ENSGT00390000008812.b.a ENSGT00940000158053 ENSGT00940000164496.a.a ENSGT00950000182978.B ENSGT01090000260093.b.f ENSGT01090000260093.b.e ENSGT00940000156213 ENSGT00530000063698.b ENSGT00940000157833.h.a Clupeocephala ANCESTRAL SPECIES 19 ENSGT00940000160140.a.a ENSGT00950000183145.C ENSGT00940000156934.k ENSGT00390000007597 ENSGT00530000063023.A.b ENSGT00940000157751 ENSGT00390000014274 ENSGT00940000156338.b ENSGT00940000164147.b ENSGT00940000154450.tc ENSGT01090000260070.C.b ##11 ENSGT00390000017974.ob ##12 ENSGT00950000183028.a.b.b ##16 ENSGT00390000015257 ENSGT00390000011598 ENSGT00950000182941.a.a.b.e.b ##22 ENSGT00950000183163.a.a.bb ##23 ENSGT00940000154096.b.b.b.b.a ##25 ENSGT00510000048364 ENSGT00390000004808.f ##27 ENSGT00390000010118.c.a.b ENSGT00940000155107.a.a.b ##32 ENSGT00560000078630 ENSGT00950000183008.a.a.a.b ENSGT00940000160424 ENSGT00940000158242 ENSGT00950000183053.D ENSGT00390000008812.b.a ENSGT00940000158053 ENSGT00940000164496.a.a ENSGT00950000182978.B Otomorpha ANCESTRAL SPECIES 9 ENSGT00940000160140.a.a ENSGT00950000183145.C ENSGT00940000156934.k ENSGT00390000007597 ENSGT00530000063023.A.b ENSGT00940000157751 ENSGT00390000014274 ENSGT00940000156338.b ENSGT00940000164147.b ENSGT00940000154450.tc ENSGT01090000260070.C.b ##11 ENSGT00390000017974.ob ##12 ENSGT00950000183028.a.b.b ##16 ENSGT00390000015257 ENSGT00390000011598 ENSGT00950000182941.a.a.b.e.b ##22 ENSGT00950000183163.a.a.bb ##23 ENSGT00940000154096.b.b.b.b.a ##25 ENSGT00510000048364 ENSGT00390000004808.f ##27 ENSGT00390000010118.c.a.b ENSGT00940000155107.a.a.b ##32 ENSGT00560000078630 ENSGT00950000183008.a.a.a.b ENSGT00940000160424 ENSGT00940000158242 ENSGT00950000183053.D ENSGT01030000234575.c.a.a.a.a.a.a.b.b.a.a.b ENSGT00390000008812.b.a ENSGT00940000158053 ENSGT00940000164496.a.a Otophysi ANCESTRAL SPECIES 174 ENSGT00390000002843.b ENSGT00940000154708 ENSGT00910000144740 ENSGT00510000049347.h ENSGT00940000154725.i ENSGT00940000154725.j.a ENSGT00940000157280.l ENSGT00940000156079 ENSGT00940000162238.a.a ENSGT00940000163557.C ENSGT00940000159791 ENSGT00390000006486 ENSGT00950000183028.a.b.b ##16 ENSGT00390000015257 ENSGT00390000011598 ENSGT00950000182941.a.a.b.e.b ##22 ENSGT00950000183163.a.a.bb ##23 ENSGT00940000154096.b.b.b.b.a ##25 ENSGT00510000048364 ENSGT00390000004808.f ##27 ENSGT00390000010118.c.a.b ENSGT00940000155107.a.a.b ##32 ENSGT00560000078630 ENSGT00950000183008.a.a.a.b ENSGT00940000160424 ENSGT00940000158242 ENSGT00950000183053.D ENSGT01030000234575.c.a.a.a.a.a.a.b.b.a.a.b ENSGT00390000004215.a.b.b.c.b.c ENSGT01060000248801 ENSGT00740000117011 Characiphysae ANCESTRAL SPECIES 91 ENSGT00940000154708 ENSGT00910000144740 ENSGT00510000049347.h ENSGT00940000154725.i ENSGT00940000154725.j.a ENSGT00940000157280.l ENSGT00940000156079 ENSGT00940000162238.a.a ENSGT00940000163557.C ENSGT00940000159791 ENSGT00390000006486 ENSGT00950000183031.A.a.a #13 ENSGT00950000183028.a.b.b ##16 ENSGT00390000015257 ENSGT00390000011598 ENSGT00950000182941.a.a.b.e.b ##22 ENSGT00950000183163.a.a.bb ##23 ENSGT00940000154096.b.b.b.b.a ##25 ENSGT00510000048364 ENSGT00390000004808.f ##27 ENSGT00940000177439 ENSGT00940000155107.a.a.b ##32 ENSGT00940000162796 ENSGT01090000260400 ENSGT00950000183175.B.a ENSGT01030000234543.A.b ENSGT00940000160581 ENSGT00940000166166 ENSGT00940000155429.b ENSGT00950000183054.a.a.b ENSGT00390000006954 Characiphysae_b ANCESTRAL SPECIES 92 ENSGT00390000002843.b ENSGT00940000154708 ENSGT00910000144740 ENSGT00510000049347.h ENSGT00940000154725.i ENSGT00940000154725.j.a ENSGT00940000157280.l ENSGT00940000156079 ENSGT00940000162238.a.a ENSGT00940000163557.C ENSGT00940000159791 ENSGT00390000006486 ENSGT00950000183028.a.b.b ##16 ENSGT00390000015257 ENSGT00390000011598 ENSGT00950000182941.a.a.b.e.b ##22 ENSGT00950000183163.a.a.bb ##23 ENSGT00940000154096.b.b.b.b.a ##25 ENSGT00510000048364 ENSGT00390000004808.f ##27 ENSGT00940000177439 ENSGT00940000155107.a.a.b ##32 ENSGT00970000195294 ENSGT00940000162796 ENSGT01090000260400 ENSGT00950000183175.B.a ENSGT01030000234543.A.b ENSGT00940000160581 ENSGT00940000166166 ENSGT00940000155429.b ENSGT00950000183054.a.a.b Characoidei ANCESTRAL SPECIES 178 ENSGT00390000002843.b ENSGT00940000154708 ENSGT00910000144740 ENSGT00510000049347.h ENSGT00940000154725.i ENSGT00940000154725.j.a ENSGT00940000157280.l ENSGT00940000156079 ENSGT00940000162238.a.a ENSGT00940000163557.C ENSGT00940000159791 ENSGT00390000006486 ENSGT00950000183028.a.b.b ##16 ENSGT00390000015257 ENSGT00390000011598 ENSGT00950000182941.a.a.b.e.b ##22 ENSGT00950000183163.a.a.bb ##23 ENSGT00940000154096.b.b.b.b.a ##25 ENSGT00510000048364 ENSGT00390000004808.f ##27 ENSGT00940000177439 ENSGT00940000155107.a.a.b ##32 ENSGT00970000195294 ENSGT00940000162796 ENSGT01090000260400 ENSGT00950000183175.B.a Mexicana tetra MODERN SPECIES 65 FAM135B (ENSAMXG00000017175) ENSAMXG00000036148 ENSAMXG00000019441 kcnk9 (ENSAMXG00000019517) ENSAMXG00000038821 TRAPPC9 (ENSAMXG00000020787) fhl3b (ENSAMXG00000032557) ##16 meaf6 (ENSAMXG00000030458) stpg1 (ENSAMXG00000020849) map7d1b (ENSAMXG00000020859) ##22 thrap3b (ENSAMXG00000020877) ##23 eva1bb (ENSAMXG00000041367) ##25 LSM10 (ENSAMXG00000025301) oscp1a (ENSAMXG00000039731) ##27 ENSAMXG00000041581 ENSAMXG00000031811 zc3h12ab (ENSAMXG00000029641) ##32 ENSAMXG00000041625 ENSAMXG00000030542 sncb (ENSAMXG00000043895) Red-bellied piranha MODERN SPECIES 263 ENSPNAG00000004348 ENSPNAG00000028401 ENSPNAG00000028469 ENSPNAG00000028491 kcnk9 (ENSPNAG00000028505) TRAPPC9 (ENSPNAG00000005622) fhl3b (ENSPNAG00000004889) ##16 meaf6 (ENSPNAG00000028667) stpg1 (ENSPNAG00000004405) map7d1b (ENSPNAG00000004418) ##22 thrap3b (ENSPNAG00000028762) ##23 eva1bb (ENSPNAG00000004796) ##25 LSM10 (ENSPNAG00000028829) oscp1a (ENSPNAG00000004456) ##27 ENSPNAG00000005053 ENSPNAG00000028945 Electric eel MODERN SPECIES 898 rragcb (ENSEEEG00000021258) #13 fhl3b (ENSEEEG00000021257) ##16 meaf6 (ENSEEEG00000021256) stpg1 (ENSEEEG00000021255) map7d1b (ENSEEEG00000021254) ##22 thrap3b (ENSEEEG00000021253) ##23 eva1bb (ENSEEEG00000021251) ##25 LSM10 (ENSEEEG00000021247) ENSEEEG00000021246 Channel catfish MODERN SPECIES 5 ENSIPUG00000004942 ST3GAL1 (ENSIPUG00000004950) ST3GAL1 (ENSIPUG00000004976) khdrbs3 (ENSIPUG00000004984) ENSIPUG00000005001 fam135b (ENSIPUG00000005028) ENSIPUG00000005100 ENSIPUG00000005154 kcnk9 (ENSIPUG00000005285) TRAPPC9 (ENSIPUG00000005309) rragcb (ENSIPUG00000005440) #13 fhl3b (ENSIPUG00000005470) ##16 ENSIPUG00000005538 meaf6 (ENSIPUG00000005566) stpg1 (ENSIPUG00000005620) map7d1b (ENSIPUG00000005646) ##22 thrap3b (ENSIPUG00000005707) ##23 eva1bb (ENSIPUG00000005771) ##25 ENSIPUG00000005788 LSM10 (ENSIPUG00000005808) oscp1a (ENSIPUG00000005816) ##27 zc3h12ab (ENSIPUG00000005852) ##32 ENSIPUG00000005858 sncb (ENSIPUG00000005865) LRRTM2 (ENSIPUG00000005874) CTNNA1 (ENSIPUG00000005901) lrrtm2 (ENSIPUG00000005981) MCHR2 (ENSIPUG00000005988) tspan17 (ENSIPUG00000006010) synpo (ENSIPUG00000006100) dctn4 (ENSIPUG00000006111) Cyprinoidei ANCESTRAL SPECIES 35 ENSGT00730000111283.a ENSGT00940000157595 ENSGT00940000153845.a.a ENSGT00940000154725.j.a.a.a.a.a.a ENSGT00940000154725.j.a.a.a.a.b ENSGT00940000154725.j.b ENSGT00940000157280.l ENSGT00940000156079 ENSGT00940000162238.a.a ENSGT00940000159308 ENSGT00940000159791 ENSGT00390000006486 ENSGT00950000183028.a.b.b ##16 ENSGT00390000015257 ENSGT00390000011598 ENSGT00950000182941.a.a.b.e.b ##22 ENSGT00950000183163.a.a.bb ##23 ENSGT00940000154096.b.b.b.b.a ##25 ENSGT00510000048364 ENSGT00390000004808.f ##27 ENSGT00390000010118.c.a.b ENSGT00940000155107.a.a.b ##32 ENSGT00560000078630 ENSGT00950000183008.a.a.a.b ENSGT00940000160424 ENSGT00940000158242 ENSGT00950000183053.D ENSGT01030000234592.A.a.b.c ENSGT01030000234575.c.a.a.a.a.a.a.b.b.a.a.b.a.a.b ENSGT00390000004215.a.b.b.c.b.c ENSGT01060000248801 Cyprininae DUPLICATION Cyprininae ANCESTRAL SPECIES 143 ENSGT00390000006486.i.b ENSGT00950000183031.A.a.a.sd.a #13 ENSGT00950000183028.a.b.b.g ##16 ENSGT00390000015257.b.b ENSGT00390000011598.b ENSGT00950000182941.a.a.b.e.b.b ##22 ENSGT00950000183163.a.a.bb.a ##23 ENSGT00940000154096.b.b.b.b.a.c ##25 ENSGT00510000048364 ENSGT00390000004808.f.a ##27 ENSGT00390000010118.c.a.b ENSGT00940000155107.a.a.b.a ##32 ENSGT01040000240385.A.b.b.b.a.a.b.a.b.a.b.b.b.a.a.a.b ENSGT00390000015257.a ENSGT00390000011598.a.a ENSGT00950000182941.a.a.b.e.b.a ##22 ENSGT00950000183163.a.a.bb.b ##23 ENSGT00940000154096.b.b.b.b.a.d ##25 ENSGT00940000181189 ENSGT00390000004808.f.b ##27 ENSGT00940000155107.a.a.b.b ##32 ENSGT00560000078630.b ENSGT00560000078630.a.a.a ENSGT00950000183008.a.a.a.b.d ENSGT00940000160424.l ENSGT00940000158242.i ENSGT00950000183053.D.i ENSGT01030000234592.A.a.b.c.b ENSGT01030000234575.c.a.a.a.a.a.a.b.b.a.a.b.a.a.a.a ENSGT01030000234575.c.a.a.a.a.a.a.b.b.a.a.b.b.c ENSGT00390000004215.a.b.b.c.b.c.a Goldfish MODERN SPECIES 10 sdha (ENSCARG00000003802) rxrba (ENSCARG00000004767) col11a2 (ENSCARG00000005224) ENSCARG00000005471 brd2a (ENSCARG00000005514) tap2a (ENSCARG00000005599) ENSCARG00000007227 zdhhc3b (ENSCARG00000007261) ehmt2 (ENSCARG00000007556) ENSCARG00000013613 ENSCARG00000013630 meaf6 (ENSCARG00000013724) ENSCARG00000013777 ENSCARG00000013783 stpg1 (ENSCARG00000013790) map7d1b (ENSCARG00000013800) ##22 thrap3b (ENSCARG00000013814) ##23 eva1bb (ENSCARG00000013820) ##25 LSM10 (ENSCARG00000013829) zc3h12ab (ENSCARG00000013835) ##32 ENSCARG00000013843 smim13 (ENSCARG00000013854) nedd9 (ENSCARG00000013862) TMEM170B (ENSCARG00000013871) HIVEP1 (ENSCARG00000013876) edn1 (ENSCARG00000013880) ENSCARG00000013901 ENSCARG00000013905 ENSCARG00000013915 ENSCARG00000013920 zgc:86598 (ENSCARG00000013937) Cyprininae_a ANCESTRAL SPECIES 43 ENSGT00940000154725.j.a.a.a.a.b ENSGT00940000154725.j.a.a.a.a.a.b.b ENSGT00940000154725.j.b.b ENSGT00940000157280.l.b.a ENSGT00940000156079.d ENSGT00940000162238.a.a ENSGT00940000163557.C ENSGT00940000159791.w ENSGT00390000006486.i.b ENSGT00950000183031.A.a.a.sd.a #13 ENSGT00950000183028.a.b.b.g ##16 ENSGT00390000015257.b.b ENSGT00390000011598.b ENSGT00390000015257.a ENSGT00390000011598.a.a ENSGT00950000182941.a.a.b.e.b.a ##22 ENSGT00950000183163.a.a.bb.b ##23 ENSGT00940000154096.b.b.b.b.a.d ##25 ENSGT00940000181189 ENSGT00390000004808.f.b ##27 ENSGT00940000155107.a.a.b.b ##32 ENSGT00560000078630.a.a.a ENSGT00950000183008.a.a.a.b.d ENSGT00940000160424.l ENSGT00940000158242.i ENSGT00950000183053.D.i ENSGT01030000234592.A.a.b.c.b ENSGT01030000234575.c.a.a.a.a.a.a.b.b.a.a.b.b.c ENSGT00390000004215.a.b.b.c.b.c.a ENSGT00940000163549.d ENSGT00940000161897.b.a.b Golden-line barbel MODERN SPECIES 431 ENSSGRG00000044341 kcnk9 (ENSSGRG00000044345) TRAPPC9 (ENSSGRG00000044348) rragcb (ENSSGRG00000044382) #13 fhl3b (ENSSGRG00000044387) ##16 ENSSGRG00000044389 stpg1 (ENSSGRG00000044390) map7d1b (ENSSGRG00000044391) ##22 thrap3b (ENSSGRG00000044395) ##23 eva1bb (ENSSGRG00000044399) ##25 oscp1a (ENSSGRG00000044401) ##27 ENSSGRG00000044403 zc3h12ab (ENSSGRG00000044406) ##32 smim13 (ENSSGRG00000044408) nedd9 (ENSSGRG00000044409) HIVEP1 (ENSSGRG00000044413) edn1 (ENSSGRG00000044414) ENSSGRG00000044415 ENSSGRG00000044416 Common carp reference MODERN SPECIES 12 ST3GAL1 (ENSCCRG00000035652) KHDRBS3 (ENSCCRG00000071461) FAM135B (ENSCCRG00000067822) ENSCCRG00000066020 ENSCCRG00000064829 ENSCCRG00000034730 kcnk9 (ENSCCRG00000079282) TRAPPC9 (ENSCCRG00000022158) ENSCCRG00000052992 rragcb (ENSCCRG00000018138) #13 fhl3b (ENSCCRG00000024062) ##16 ENSCCRG00000073470 ENSCCRG00000060628 meaf6 (ENSCCRG00000031868) stpg1 (ENSCCRG00000031856) map7d1b (ENSCCRG00000038821) ##22 thrap3b (ENSCCRG00000038825) ##23 eva1bb (ENSCCRG00000038827) ##25 oscp1a (ENSCCRG00000022844) ##27 zc3h12ab (ENSCCRG00000081392) ##32 smim13 (ENSCCRG00000074273) nedd9 (ENSCCRG00000022862) TMEM170B (ENSCCRG00000005805) HIVEP1 (ENSCCRG00000005836) edn1 (ENSCCRG00000005841) ENSCCRG00000058333 ENSCCRG00000070436 ENSCCRG00000044535 si:ch211-133n4.6 (ENSCCRG00000059589) stm (ENSCCRG00000049053) si:ch211-80h18.1 (ENSCCRG00000003110) Cyprininae ANCESTRAL SPECIES 143 ENSGT00940000154725.j.a.a.a.a.a.a.a.b ENSGT00940000154725.j.a.a.a.a.b ENSGT00940000154725.j.a.a.a.a.a.b.b ENSGT00940000154725.j.b.b ENSGT00940000157280.l.b.a ENSGT00940000156079.d ENSGT00940000163557.C ENSGT00940000159791.w ENSGT00390000006486.i.b ENSGT00950000183031.A.a.a.sd.a #13 ENSGT00950000183028.a.b.b.g ##16 ENSGT00390000015257.b.b ENSGT00390000011598.b ENSGT00950000182941.a.a.b.e.b.b ##22 ENSGT00950000183163.a.a.bb.a ##23 ENSGT00940000154096.b.b.b.b.a.c ##25 ENSGT00510000048364 ENSGT00390000004808.f.a ##27 ENSGT00390000010118.c.a.b ENSGT00940000155107.a.a.b.a ##32 ENSGT01040000240385.A.b.b.b.a.a.b.a.b.a.b.b.b.a.a.a.b ENSGT00390000015257.a ENSGT00390000011598.a.a ENSGT00950000182941.a.a.b.e.b.a ##22 ENSGT00950000183163.a.a.bb.b ##23 ENSGT00940000154096.b.b.b.b.a.d ##25 ENSGT00940000181189 ENSGT00390000004808.f.b ##27 ENSGT00940000155107.a.a.b.b ##32 Cyprininae_a ANCESTRAL SPECIES 80 ENSGT00940000159051.a.b ENSGT00730000111283.a.c.b ENSGT00940000157595.h ENSGT00940000153845.a.a.c ENSGT00940000154725.j.a.a.b ENSGT00940000154725.j.a.a.a.a.a.b.a ENSGT00940000154725.j.b.a.a ENSGT00940000154725.j.a.a.a.a.a.a.b ENSGT00940000157280.l.b.b ENSGT00940000156079.c ENSGT00940000159791.x ENSGT00390000006486.i.a ENSGT00950000183031.A.a.a.sd.b #13 ENSGT00950000183028.a.b.b.h ##16 ENSGT00390000015257.b.a.b ENSGT00950000182941.a.a.b.e.b.b ##22 ENSGT00950000183163.a.a.bb.a ##23 ENSGT00940000154096.b.b.b.b.a.c ##25 ENSGT00510000048364 ENSGT00390000004808.f.a ##27 ENSGT00390000010118.c.a.b ENSGT00940000155107.a.a.b.a ##32 ENSGT01040000240385.A.b.b.b.a.a.b.a.b.a.b.b.b.a.a.a.b ENSGT00560000078630.a.b ENSGT00950000183008.a.a.a.b.c ENSGT00940000160424.k ENSGT00940000158242.j ENSGT00950000183053.D.j ENSGT01030000234592.A.a.b.c.a.b.a.a ENSGT01030000234575.c.a.a.a.a.a.a.b.b.a.a.b.a.a.b.b ENSGT01030000234575.c.a.a.a.a.a.a.b.b.a.a.b.a.a.a.b Common carp reference MODERN SPECIES 31 ST3GAL1 (ENSCCRG00000077098) ST3GAL1 (ENSCCRG00000060275) ENSCCRG00000014824 ENSCCRG00000068801 KHDRBS3 (ENSCCRG00000039121) FAM135B (ENSCCRG00000032935) ENSCCRG00000075899 ENSCCRG00000070761 kcnk9 (ENSCCRG00000006675) TRAPPC9 (ENSCCRG00000039699) ENSCCRG00000066644 rragcb (ENSCCRG00000024063) #13 fhl3b (ENSCCRG00000047959) ##16 meaf6 (ENSCCRG00000031916) stpg1 (ENSCCRG00000031912) map7d1b (ENSCCRG00000045480) ##22 thrap3b (ENSCCRG00000039036) ##23 oscp1a (ENSCCRG00000000431) ##27 ENSCCRG00000000453 zc3h12ab (ENSCCRG00000043038) ##32 ENSCCRG00000073888 smim13 (ENSCCRG00000039594) nedd9 (ENSCCRG00000043022) TMEM170B (ENSCCRG00000056870) HIVEP1 (ENSCCRG00000064435) edn1 (ENSCCRG00000072509) ENSCCRG00000005832 ENSCCRG00000079612 ENSCCRG00000062069 ENSCCRG00000066055 ENSCCRG00000058987 Golden-line barbel MODERN SPECIES 693 TRAPPC9 (ENSSGRG00000005537) ENSSGRG00000005851 rragcb (ENSSGRG00000005854) #13 fhl3b (ENSSGRG00000005855) ##16 meaf6 (ENSSGRG00000005860) stpg1 (ENSSGRG00000005863) map7d1b (ENSSGRG00000005866) ##22 thrap3b (ENSSGRG00000005870) ##23 eva1bb (ENSSGRG00000005877) ##25 LSM10 (ENSSGRG00000005878) oscp1a (ENSSGRG00000005880) ##27 zc3h12ab (ENSSGRG00000005885) ##32 ENSSGRG00000005887 smim13 (ENSSGRG00000005888) nedd9 (ENSSGRG00000005890) TMEM170B (ENSSGRG00000005891) HIVEP1 (ENSSGRG00000005892) edn1 (ENSSGRG00000005893) ENSSGRG00000005896 ENSSGRG00000005938 ENSSGRG00000005986 ENSSGRG00000005991 Goldfish DUPLICATION Goldfish MODERN SPECIES 38 stpg1 (ENSCARG00000027732) meaf6 (ENSCARG00000027707) ENSCARG00000027676 ENSCARG00000027669 ENSCARG00000027653 ENSCARG00000027628 zgc:86598 (ENSCARG00000027280) FAM135B (ENSCARG00000027192) ENSCARG00000027155 ENSCARG00000027135 kcnk9 (ENSCARG00000027122) TRAPPC9 (ENSCARG00000027040) rragcb (ENSCARG00000026997) #13 fhl3b (ENSCARG00000026986) ##16 meaf6 (ENSCARG00000026941) map7d1b (ENSCARG00000026890) ##22 thrap3b (ENSCARG00000026833) ##23 eva1bb (ENSCARG00000066705) ##25 LSM10 (ENSCARG00000066701) oscp1a (ENSCARG00000066679) ##27 ENSCARG00000066670 zc3h12ab (ENSCARG00000066658) ##32 ENSCARG00000066574 smim13 (ENSCARG00000066566) nedd9 (ENSCARG00000066558) ENSCARG00000066545 clk2a (ENSCARG00000066066) si:ch211-81a5.8 (ENSCARG00000066027) ENSCARG00000066017 ndufv1 (ENSCARG00000065911) ENSCARG00000065800 Goldfish MODERN SPECIES 38 meaf6 (ENSCARG00000026941) fhl3b (ENSCARG00000026986) ##16 rragcb (ENSCARG00000026997) #13 TRAPPC9 (ENSCARG00000027040) kcnk9 (ENSCARG00000027122) ENSCARG00000027135 ENSCARG00000027155 FAM135B (ENSCARG00000027192) zgc:86598 (ENSCARG00000027280) ENSCARG00000027628 ENSCARG00000027653 ENSCARG00000027669 ENSCARG00000027676 meaf6 (ENSCARG00000027707) stpg1 (ENSCARG00000027732) map7d1b (ENSCARG00000027760) ##22 ENSCARG00000027768 eva1bb (ENSCARG00000027776) ##25 LSM10 (ENSCARG00000027782) oscp1a (ENSCARG00000027787) ##27 ENSCARG00000027799 zc3h12ab (ENSCARG00000027812) ##32 ENSCARG00000027832 smim13 (ENSCARG00000027974) nedd9 (ENSCARG00000027982) ENSCARG00000028022 gsk3aa (ENSCARG00000028048) GRIK5 (ENSCARG00000028160) ENSCARG00000029734 zgc:174904 (ENSCARG00000029741) pdk2b (ENSCARG00000029746) Zebrafish MODERN SPECIES 10 ENSDARG00000079310 ENSDARG00000079654 kcnk9 (ENSDARG00000104563) ENSDARG00000103106 TRAPPC9 (ENSDARG00000099118) rragcb (ENSDARG00000099049) #13 fhl3b (ENSDARG00000104315) ##16 ENSDARG00000100909 ENSDARG00000105241 btr25 (ENSDARG00000102018) ENSDARG00000102143 ENSDARG00000099509 meaf6 (ENSDARG00000101216) stpg1 (ENSDARG00000103765) ENSDARG00000113654 map7d1b (ENSDARG00000104701) ##22 ENSDARG00000101490 ##22 ENSDARG00000103395 ##22 ENSDARG00000102533 ##22 ENSDARG00000089402 ##22 thrap3b (ENSDARG00000098228) ##23 eva1bb (ENSDARG00000100698) ##25 LSM10 (ENSDARG00000101222) oscp1a (ENSDARG00000104403) ##27 zc3h12ab (ENSDARG00000101034) ##32 ENSDARG00000100046 ENSDARG00000105283 ENSDARG00000102913 ENSDARG00000102992 ENSDARG00000100450 btr18 (ENSDARG00000103618) Clupeiformes ANCESTRAL SPECIES 42 ENSGT01030000235133.c ENSGT01090000260070.C.b ##11 ENSGT00390000017974.ob ##12 ENSGT00950000183028.a.b.b ##16 ENSGT00390000015257.d ENSGT00390000011598 ENSGT00950000182941.a.a.b.e.b ##22 ENSGT00950000183163.a.a.bb ##23 ENSGT00940000154096.b.b.b.b.a ##25 ENSGT00510000048364 ENSGT00390000004808.f ##27 ENSGT00390000010118.c.a.b ENSGT00940000155107.a.a.b ##32 ENSGT00560000078630 ENSGT00950000183008.a.a.a.b ENSGT00940000160424 ENSGT00940000158242 ENSGT00950000183053.D ENSGT01030000234575.c.a.a.a.a.a.a.b.b.a.a.b.i ENSGT00390000008812.b.a ENSGT00940000158053 ENSGT00940000164496.a.a Denticle herring MODERN SPECIES 12 ehmt2 (ENSDCDG00000011830) ENSDCDG00000011588 slc44a4 (ENSDCDG00000007527) RNF5 (ENSDCDG00000007104) ENSDCDG00000007061 ENSDCDG00000007050 mhc1zka (ENSDCDG00000006963) ENSDCDG00000006887 gja9b (ENSDCDG00000006875) ##11 mycbp (ENSDCDG00000005973) ##12 ENSDCDG00000005859 ENSDCDG00000005755 #13 fhl3b (ENSDCDG00000035449) ##16 meaf6 (ENSDCDG00000035448) stpg1 (ENSDCDG00000035447) map7d1b (ENSDCDG00000035444) ##22 thrap3b (ENSDCDG00000035440) ##23 eva1bb (ENSDCDG00000035438) ##25 LSM10 (ENSDCDG00000035437) oscp1a (ENSDCDG00000035436) ##27 zc3h12ab (ENSDCDG00000035435) ##32 smim13 (ENSDCDG00000035434) nedd9 (ENSDCDG00000035433) TMEM170B (ENSDCDG00000035431) HIVEP1 (ENSDCDG00000035429) edn1 (ENSDCDG00000035426) illr1 (ENSDCDG00000035425) si:dkeyp-92c9.2 (ENSDCDG00000035424) myo1g (ENSDCDG00000035308) rxrba (ENSDCDG00000035254) col11a2 (ENSDCDG00000035209) Atlantic herring MODERN SPECIES 10 PI4KB (ENSCHAG00000010721) gabpb2a (ENSCHAG00000011246) ENSCHAG00000011296 ctnnb2 (ENSCHAG00000011330) ENSCHAG00000012419 ENSCHAG00000000551 ENSCHAG00000000596 ENSCHAG00000000655 ENSCHAG00000000674 gja9b (ENSCHAG00000000710) ##11 mycbp (ENSCHAG00000000761) ##12 rragca (ENSCHAG00000000775) #13 fhl3b (ENSCHAG00000000790) ##16 meaf6 (ENSCHAG00000000917) stpg1 (ENSCHAG00000001040) map7d1b (ENSCHAG00000001085) ##22 thrap3b (ENSCHAG00000001178) ##23 eva1bb (ENSCHAG00000001235) ##25 LSM10 (ENSCHAG00000001270) oscp1a (ENSCHAG00000001289) ##27 ENSCHAG00000001342 smim13 (ENSCHAG00000001366) nedd9 (ENSCHAG00000001391) TMEM170B (ENSCHAG00000001423) HIVEP1 (ENSCHAG00000001481) edn1 (ENSCHAG00000001595) ENSCHAG00000001663 ENSCHAG00000001909 ENSCHAG00000001932 dlgap3 (ENSCHAG00000002240) ENSCHAG00000002422 Euteleosteomorpha ANCESTRAL SPECIES 12 ENSGT00950000183145.C ENSGT00940000156934.k ENSGT00390000007597 ENSGT00530000063023.A.b ENSGT00940000157751 ENSGT00390000014274 ENSGT00940000156338.b ENSGT00940000164147.b ENSGT00940000160519.a.b ENSGT00940000154450.tc ENSGT01090000260070.C.b ##11 ENSGT00390000017974.ob ##12 ENSGT00950000183028.a.b.b ##16 ENSGT00390000015257 ENSGT00390000011598 ENSGT00950000182941.a.a.b.e.b ##22 ENSGT00950000183163.a.a.bb ##23 ENSGT00940000154096.b.b.b.b.a ##25 ENSGT00510000048364 ENSGT00390000004808.f ##27 ENSGT00390000010118.c.a.b ENSGT00940000155107.a.a.b ##32 ENSGT00560000078630 ENSGT00950000183008.a.a.a.b ENSGT00940000160424 ENSGT00940000158242 ENSGT00950000183053.D ENSGT00390000008812.b.a ENSGT00940000158053 ENSGT00940000164496.a.a ENSGT00950000182978.B Acanthomorphata ANCESTRAL SPECIES 70 ENSGT00390000008551 ENSGT00940000163648.b ENSGT00940000158729 ENSGT00390000012738 ENSGT00940000169005 ENSGT00390000010028 ENSGT00640000091536 ENSGT00950000182848.c.b.b.a ENSGT00390000013601 ENSGT00940000157613 ENSGT00390000017955.c ENSGT00940000156790 ENSGT00950000183028.a.b.b ##16 ENSGT00390000015257 ENSGT00390000011598 ENSGT00950000182941.a.a.b.e.b ##22 ENSGT00950000183163.a.a.bb ##23 ENSGT00940000154096.b.b.b.b.a ##25 ENSGT00510000048364 ENSGT00390000004808.f ##27 ENSGT00390000010118.c.a.b ENSGT00940000155107.a.a.b ##32 ENSGT00560000078630 ENSGT00950000183008.a.a.a.b ENSGT00940000160424 ENSGT00940000158242 ENSGT00950000183053.D ENSGT00390000008812.b.a ENSGT00940000158053 ENSGT00940000164496.a.a ENSGT00950000182978.B Euacanthomorphacea ANCESTRAL SPECIES 24 ENSGT00390000008551 ENSGT00940000163648.b ENSGT00940000158729 ENSGT00390000012738 ENSGT00940000169005 ENSGT00390000010028 ENSGT00640000091536 ENSGT00950000182848.c.b.b.a ENSGT00390000013601 ENSGT00940000157613 ENSGT00390000017955.c ENSGT00940000156790 ENSGT00950000183028.a.b.b ##16 ENSGT00390000015257 ENSGT00390000011598 ENSGT00950000182941.a.a.b.e.b ##22 ENSGT00950000183163.a.a.bb ##23 ENSGT00940000154096.b.b.b.b.a ##25 ENSGT00510000048364 ENSGT00390000004808.f ##27 ENSGT00390000010118.c.a.b ENSGT00940000155107.a.a.b ##32 ENSGT00560000078630 ENSGT00950000183008.a.a.a.b ENSGT00940000160424 ENSGT00940000158242 ENSGT00950000183053.D ENSGT00390000008812.b.a ENSGT00940000158053 ENSGT00940000164496.a.a ENSGT00950000182978.B Pinecone sodierfish MODERN SPECIES 2 ENSMMDG00005021937 ago4 (ENSMMDG00005021010) CLSPN (ENSMMDG00005020985) ENSMMDG00005020984 cdca5 (ENSMMDG00005020983) psmb2 (ENSMMDG00005020981) tfap2e (ENSMMDG00005020979) NCDN (ENSMMDG00005020974) KIAA0319L (ENSMMDG00005019489) cap1 (ENSMMDG00005019452) ppt1 (ENSMMDG00005019225) rragcb (ENSMMDG00005019217) #13 fhl3b (ENSMMDG00005019214) ##16 meaf6 (ENSMMDG00005019209) stpg1 (ENSMMDG00005019205) map7d1b (ENSMMDG00005019203) ##22 thrap3b (ENSMMDG00005019200) ##23 eva1bb (ENSMMDG00005019196) ##25 LSM10 (ENSMMDG00005019195) oscp1a (ENSMMDG00005019191) ##27 ENSMMDG00005019189 ENSMMDG00005019186 ENSMMDG00005019184 ##32 zc3h12ab (ENSMMDG00005019182) ##32 smim13 (ENSMMDG00005019180) nedd9 (ENSMMDG00005019178) TMEM170B (ENSMMDG00005019175) HIVEP1 (ENSMMDG00005019157) edn1 (ENSMMDG00005019150) ENSMMDG00005019149 myo1g (ENSMMDG00005019146) Percomorphaceae ANCESTRAL SPECIES 10 ENSGT00390000008551 ENSGT00940000163648.b ENSGT00940000158729 ENSGT00390000012738 ENSGT00940000169005 ENSGT00390000010028 ENSGT00640000091536 ENSGT00950000182848.c.b.b.a ENSGT00390000013601 ENSGT00940000157613 ENSGT00390000017955.c ENSGT00940000156790 ENSGT00950000183028.a.b.b ##16 ENSGT00390000015257 ENSGT00390000011598 ENSGT00950000182941.a.a.b.e.b ##22 ENSGT00950000183163.a.a.bb ##23 ENSGT00940000154096.b.b.b.b.a ##25 ENSGT00510000048364 ENSGT00390000004808.f ##27 ENSGT00390000010118.c.a.b ENSGT00940000155107.a.a.b ##32 ENSGT00560000078630 ENSGT00950000183008.a.a.a.b ENSGT00940000160424 ENSGT00940000158242 ENSGT00950000183053.D ENSGT00390000008812.b.a ENSGT00940000158053 ENSGT00940000164496.a.a ENSGT00950000182978.B Tiger tail seahorse MODERN SPECIES 328 c19h1orf109 (ENSHCOG00000003649) cdca8 (ENSHCOG00000003685) ago4 (ENSHCOG00000003725) CLSPN (ENSHCOG00000003741) ENSHCOG00000003758 ENSHCOG00000003772 psmb2 (ENSHCOG00000003803) tfap2e (ENSHCOG00000003827) NCDN (ENSHCOG00000003839) KIAA0319L (ENSHCOG00000003961) cap1 (ENSHCOG00000003977) rragcb (ENSHCOG00000003986) #13 ppt1 (ENSHCOG00000004004) fhl3b (ENSHCOG00000004026) ##16 meaf6 (ENSHCOG00000004069) ENSHCOG00000004092 ##22 thrap3b (ENSHCOG00000004098) ##23 eva1bb (ENSHCOG00000004121) ##25 oscp1a (ENSHCOG00000004224) ##27 zc3h12ab (ENSHCOG00000004255) ##32 smim13 (ENSHCOG00000004269) nedd9 (ENSHCOG00000004279) Percomorphaceae_B ANCESTRAL SPECIES 15 ENSGT00390000008551 ENSGT00940000163648.b ENSGT00940000158729 ENSGT00390000012738 ENSGT00940000169005 ENSGT00390000010028 ENSGT00640000091536 ENSGT00950000182848.c.b.b.a ENSGT00390000013601 ENSGT00940000157613 ENSGT00390000017955.c ENSGT00940000156790 ENSGT00950000183028.a.b.b ##16 ENSGT00390000015257 ENSGT00390000011598 ENSGT00950000182941.a.a.b.e.b ##22 ENSGT00950000183163.a.a.bb ##23 ENSGT00940000154096.b.b.b.b.a ##25 ENSGT00510000048364 ENSGT00390000004808.f ##27 ENSGT00390000010118.c.a.b ENSGT00940000155107.a.a.b ##32 ENSGT00560000078630 ENSGT00950000183008.a.a.a.b ENSGT00940000160424 ENSGT00940000158242 ENSGT00950000183053.D ENSGT00390000008812.b.a ENSGT00940000158053 ENSGT00940000164496.a.a ENSGT00950000182978.B Ovalentaria ANCESTRAL SPECIES 12 ENSGT00390000008551 ENSGT00940000163648.b ENSGT00940000158729 ENSGT00390000012738 ENSGT00940000169005 ENSGT00390000010028 ENSGT00640000091536 ENSGT00950000182848.c.b.b.a ENSGT00390000013601 ENSGT00940000157613 ENSGT00390000017955.c ENSGT00940000156790 ENSGT00950000183028.a.b.b ##16 ENSGT00390000015257 ENSGT00390000011598 ENSGT00950000182941.a.a.b.e.b ##22 ENSGT00950000183163.a.a.bb ##23 ENSGT00940000154096.b.b.b.b.a ##25 ENSGT00510000048364 ENSGT00390000004808.f ##27 ENSGT00390000010118.c.a.b ENSGT00940000155107.a.a.b ##32 ENSGT00560000078630 ENSGT00950000183008.a.a.a.b ENSGT00940000160424 ENSGT00940000158242 ENSGT00950000183053.D ENSGT00390000008812.b.a ENSGT00940000158053 ENSGT00940000164496.a.a ENSGT00950000182978.B Atherinomorphae ANCESTRAL SPECIES 52 ENSGT00390000011115 ENSGT00390000008551 ENSGT00940000163648.b ENSGT00940000158729 ENSGT00390000012738 ENSGT00940000169005 ENSGT00390000010028 ENSGT00640000091536 ENSGT00950000182848.c.b.b.a ENSGT00390000013601 ENSGT00940000157613 ENSGT00390000017955.c ENSGT00940000156790 ENSGT00950000183028.a.b.b ##16 ENSGT00390000015257 ENSGT00950000182941.a.a.b.e.b ##22 ENSGT00950000183163.a.a.bb ##23 ENSGT00940000154096.b.b.b.b.a ##25 ENSGT00510000048364 ENSGT00390000004808.f ##27 ENSGT00940000177439 ENSGT00940000155107.a.a.b ##32 ENSGT00560000078630 Oryzias ANCESTRAL SPECIES 23 ENSGT00390000011115 ENSGT00390000008551 ENSGT00940000163648.b ENSGT00940000158729 ENSGT00390000012738 ENSGT00940000169005 ENSGT00390000010028 ENSGT00640000091536 ENSGT00950000182848.c.b.b.a ENSGT00390000013601 ENSGT00940000157613 ENSGT00390000017955.c ENSGT00940000156790 ENSGT00950000183028.a.b.b ##16 ENSGT00390000015257 ENSGT00950000182941.a.a.b.e.b ##22 ENSGT00950000183163.a.a.bb ##23 ENSGT00940000154096.b.b.b.b.a ##25 ENSGT00510000048364 ENSGT00390000004808.f ##27 ENSGT00940000177439.a ENSGT00940000177439.b ENSGT00940000155107.a.a.b ##32 ENSGT00560000078630 ENSGT00530000064067 ENSGT00940000156213.q.b ENSGT00940000156213.q.a ENSGT01090000260093.b.e ENSGT01090000260093.b.f ENSGT00950000182978.B ENSGT00940000164496.a.a Oryzias_a ANCESTRAL SPECIES 18 ENSGT00390000011115 ENSGT00390000008551 ENSGT00940000163648.b ENSGT00940000158729 ENSGT00390000012738 ENSGT00940000169005 ENSGT00390000010028 ENSGT00640000091536 ENSGT00950000182848.c.b.b.a ENSGT00390000013601 ENSGT00940000157613 ENSGT00390000017955.c ENSGT00940000156790 ENSGT00950000183028.a.b.b ##16 ENSGT00390000015257 ENSGT00950000182941.a.a.b.e.b ##22 ENSGT00950000183163.a.a.bb ##23 ENSGT00940000154096.b.b.b.b.a ##25 ENSGT00510000048364 ENSGT00390000004808.f ##27 ENSGT00390000010118.c.a.b ENSGT00940000177439.b ENSGT00940000155107.a.a.b ##32 ENSGT00560000078630 ENSGT00530000064067 ENSGT00940000156213.q.b ENSGT00940000156213.q.a ENSGT01090000260093.b.e ENSGT01090000260093.b.f ENSGT00950000182978.B ENSGT00940000164496.a.a Japanese Medaka HdrR MODERN SPECIES 2 cdca8 (ENSORLG00000009938) c19h1orf109 (ENSORLG00000009883) ENSORLG00000009875 ago4 (ENSORLG00000009865) CLSPN (ENSORLG00000009781) ENSORLG00000027383 cdca5 (ENSORLG00000009754) psmb2 (ENSORLG00000009748) tfap2e (ENSORLG00000022744) NCDN (ENSORLG00000009735) KIAA0319L (ENSORLG00000009728) cap1 (ENSORLG00000009709) ppt1 (ENSORLG00000009676) rragcb (ENSORLG00000009645) #13 meaf6 (ENSORLG00000021858) map7d1b (ENSORLG00000009561) ##22 thrap3b (ENSORLG00000009543) ##23 eva1bb (ENSORLG00000009511) ##25 LSM10 (ENSORLG00000009504) ENSORLG00000028326 oscp1a (ENSORLG00000009500) ##27 ENSORLG00000028537 ENSORLG00000027497 ENSORLG00000009473 ##32 smim13 (ENSORLG00000023911) msto1 (ENSORLG00000009462) ENSORLG00000009430 ENSORLG00000028783 xkr8.3 (ENSORLG00000009411) ENSORLG00000009399 eya3 (ENSORLG00000009396) Oryzias_b ANCESTRAL SPECIES 27 ENSGT00390000008551 ENSGT00940000163648.b ENSGT00940000158729 ENSGT00390000012738 ENSGT00940000169005 ENSGT00390000010028 ENSGT00640000091536 ENSGT00950000182848.c.b.b.a ENSGT00390000013601 ENSGT00940000157613 ENSGT00390000017955.c ENSGT00940000156790 ENSGT00950000183031.A.a.a #13 ENSGT00950000183028.a.b.b ##16 ENSGT00390000015257 ENSGT00950000182941.a.a.b.e.b ##22 ENSGT00950000183163.a.a.bb ##23 ENSGT00940000154096.b.b.b.b.a ##25 ENSGT00510000048364 ENSGT00390000004808.f ##27 ENSGT00940000177439.a ENSGT00940000177439.b ENSGT00940000155107.a.a.b ##32 ENSGT00560000078630 ENSGT00530000064067 ENSGT00940000156213.r ENSGT01090000260093.b.e ENSGT01090000260093.b.f ENSGT00950000182978.B ENSGT00940000164496.a.a ENSGT00940000158053 Javanese ricefish MODERN SPECIES 2 ENSOJAG00000014949 ENSOJAG00000015107 cdca8 (ENSOJAG00000015123) c19h1orf109 (ENSOJAG00000015238) ENSOJAG00000015245 EIF2C4 (ENSOJAG00000015300) ENSOJAG00000017111 psmb2 (ENSOJAG00000017149) tfap2e (ENSOJAG00000017207) KIAA0319L (ENSOJAG00000017300) cap1 (ENSOJAG00000018135) ENSOJAG00000018375 rragcb (ENSOJAG00000018406) #13 fhl3b (ENSOJAG00000018420) ##16 meaf6 (ENSOJAG00000018430) map7d1b (ENSOJAG00000018478) ##22 thrap3b (ENSOJAG00000018559) ##23 eva1bb (ENSOJAG00000018573) ##25 LSM10 (ENSOJAG00000018606) oscp1a (ENSOJAG00000018623) ##27 ENSOJAG00000001622 ENSOJAG00000001634 zc3h12ab (ENSOJAG00000001643) ##32 smim13 (ENSOJAG00000001654) msto1 (ENSOJAG00000001662) srsf4 (ENSOJAG00000001676) ENSOJAG00000001693 xkr8.3 (ENSOJAG00000001703) ENSOJAG00000001723 eya3 (ENSOJAG00000001877) si:ch211-195b13.1 (ENSOJAG00000002602) Indian medaka MODERN SPECIES 3 ENSOMEG00000006427 ago4 (ENSOMEG00000006399) CLSPN (ENSOMEG00000006343) ENSOMEG00000006270 cdca5 (ENSOMEG00000006255) psmb2 (ENSOMEG00000006246) ENSOMEG00000006212 tfap2e (ENSOMEG00000000143) NCDN (ENSOMEG00000006095) KIAA0319L (ENSOMEG00000006068) cap1 (ENSOMEG00000006049) ppt1 (ENSOMEG00000006005) rragcb (ENSOMEG00000000957) #13 fhl3b (ENSOMEG00000005944) ##16 meaf6 (ENSOMEG00000005907) map7d1b (ENSOMEG00000005865) ##22 thrap3b (ENSOMEG00000005716) ##23 eva1bb (ENSOMEG00000005691) ##25 ENSOMEG00000005680 oscp1a (ENSOMEG00000005663) ##27 ENSOMEG00000005633 ENSOMEG00000005619 ENSOMEG00000005607 zc3h12ab (ENSOMEG00000005602) ##32 smim13 (ENSOMEG00000000693) msto1 (ENSOMEG00000005580) srsf4 (ENSOMEG00000005541) xkr8.3 (ENSOMEG00000005514) ENSOMEG00000005502 eya3 (ENSOMEG00000005472) si:ch211-195b13.1 (ENSOMEG00000022573) Cyprinodontiformes ANCESTRAL SPECIES 10 ENSGT00390000008551 ENSGT00940000163648.b ENSGT00940000158729 ENSGT00390000012738 ENSGT00940000169005 ENSGT00390000010028 ENSGT00640000091536 ENSGT00950000182848.c.b.b.a ENSGT00390000013601 ENSGT00940000157613 ENSGT00390000017955.c ENSGT00940000156790 ENSGT00950000183028.a.b.b ##16 ENSGT00390000015257 ENSGT00390000011598 ENSGT00950000182941.a.a.b.e.b ##22 ENSGT00950000183163.a.a.bb ##23 ENSGT00940000154096.b.b.b.b.a ##25 ENSGT00510000048364 ENSGT00390000004808.f ##27 ENSGT00390000010118.c.a.b ENSGT00940000155107.a.a.b ##32 ENSGT00560000078630 ENSGT00940000164496.a.a ENSGT00950000182978.B ENSGT01090000260093.b.f ENSGT01090000260093.b.e ENSGT00940000156213.r ENSGT00940000156213.q.a ENSGT00940000156213.q.b ENSGT00530000064067 Aplocheiloidei ANCESTRAL SPECIES 129 ENSGT00390000008551 ENSGT00940000163648.b ENSGT00940000158729 ENSGT00390000012738 ENSGT00940000169005 ENSGT00390000010028 ENSGT00640000091536 ENSGT00950000182848.c.b.b.a ENSGT00390000013601 ENSGT00940000157613 ENSGT00390000017955.c ENSGT00940000156790 ENSGT00950000183028.a.b.b ##16 ENSGT00390000015257 ENSGT00390000011598 ENSGT00950000182941.a.a.b.e.b ##22 ENSGT00950000183163.a.a.bb ##23 ENSGT00940000154096.b.b.b.b.a ##25 ENSGT00510000048364 ENSGT00390000004808.f ##27 Turquoise killifish MODERN SPECIES 411 cap1 (ENSNFUG00015020221) ppt1 (ENSNFUG00015020397) ENSNFUG00015020420 MEAF6 (ENSNFUG00015020423) map7d1b (ENSNFUG00015020435) ##22 thrap3b (ENSNFUG00015020457) ##23 Cyprinodontoidei ANCESTRAL SPECIES 60 ENSGT00940000166692 ENSGT00390000010887.b ENSGT00940000163960.a ENSGT00940000158729 ENSGT00390000012738 ENSGT00940000169005 ENSGT00390000010028 ENSGT00640000091536 ENSGT00950000182848.c.b.b.a ENSGT00390000013601 ENSGT00940000157613 ENSGT00390000017955.c ENSGT00940000156790 ENSGT00950000183028.a.b.b ##16 ENSGT00390000015257 ENSGT00950000182941.a.a.b.e.b ##22 ENSGT00950000183163.a.a.bb ##23 ENSGT00940000154096.b.b.b.b.a ##25 ENSGT00510000048364 ENSGT00390000004808.f ##27 ENSGT00390000010118.c.a.b ENSGT00940000155107.a.a.b ##32 ENSGT00560000078630 ENSGT00940000164496.a.a ENSGT00950000182978.B NAME_4 ANCESTRAL SPECIES 178 ENSGT00940000166692 ENSGT00390000010887.b ENSGT00940000163960.a ENSGT00940000158729.n ENSGT00390000012738 ENSGT00940000169005 ENSGT00390000010028 ENSGT00640000091536 ENSGT00950000182848.c.b.b.a ENSGT00390000013601 ENSGT00940000157613 ENSGT00390000017955.c ENSGT00940000156790 ENSGT00950000183028.a.b.b ##16 ENSGT00390000015257 ENSGT00950000182941.a.a.b.e.b ##22 ENSGT00950000183163.a.a.bb ##23 ENSGT00940000154096.b.b.b.b.a ##25 ENSGT00510000048364 ENSGT00390000004808.f ##27 ENSGT00390000010118.c.a.b ENSGT00940000155107.a.a.b ##32 ENSGT00560000078630 ENSGT00940000164496.a.a ENSGT00950000182978.B Mummichog MODERN SPECIES 1085 meaf6 (ENSFHEG00000001037) map7d1b (ENSFHEG00000001044) ##22 thrap3b (ENSFHEG00000001051) ##23 ENSFHEG00000001054 LSM10 (ENSFHEG00000001058) oscp1a (ENSFHEG00000001061) ##27 ENSFHEG00000001064 Poeciliinae ANCESTRAL SPECIES 24 ENSGT00940000166692 ENSGT00390000010887.b ENSGT00940000163960.a ENSGT00940000158729 ENSGT00390000012738 ENSGT00940000169005 ENSGT00390000010028 ENSGT00640000091536 ENSGT00950000182848.c.b.b.a ENSGT00390000013601 ENSGT00940000157613 ENSGT00390000017955.c ENSGT00940000156790 ENSGT00950000183028.a.b.b ##16 ENSGT00390000015257 ENSGT00950000182941.a.a.b.e.b ##22 ENSGT00950000183163.a.a.bb ##23 ENSGT00940000154096.b.b.b.b.a ##25 ENSGT00510000048364 ENSGT00390000004808.f ##27 ENSGT00390000010118.c.a.b ENSGT00950000182978.B ENSGT00940000164496.a.a ENSGT00560000078630 ENSGT00940000155107.a.a.b ##32 ENSGT01090000260093.b.f.o ENSGT01090000260093.b.e ENSGT00940000156213.r ENSGT00940000156213.q.a ENSGT00940000156213.q.b ENSGT00530000064067 Platyfish MODERN SPECIES 4 ENSXMAG00000016688 ENSXMAG00000027954 ago4 (ENSXMAG00000016657) CLSPN (ENSXMAG00000016634) ENSXMAG00000021351 cdca5 (ENSXMAG00000022429) psmb2 (ENSXMAG00000016616) tfap2e (ENSXMAG00000003446) NCDN (ENSXMAG00000027698) KIAA0319L (ENSXMAG00000003454) cap1 (ENSXMAG00000028529) ppt1 (ENSXMAG00000003488) rragcb (ENSXMAG00000013223) #13 fhl3b (ENSXMAG00000003516) ##16 meaf6 (ENSXMAG00000003525) map7d1b (ENSXMAG00000003534) ##22 thrap3b (ENSXMAG00000017962) ##23 eva1bb (ENSXMAG00000017970) ##25 LSM10 (ENSXMAG00000019963) ENSXMAG00000004775 ##27 ENSXMAG00000028561 ##27 ENSXMAG00000028082 ENSXMAG00000017971 eya3 (ENSXMAG00000017972) si:ch211-195b13.1 (ENSXMAG00000017993) smim13 (ENSXMAG00000019893) zc3h12ab (ENSXMAG00000025043) ##32 ENSXMAG00000029667 XKR8 (ENSXMAG00000021722) xkr8.3 (ENSXMAG00000005543) ENSXMAG00000021549 Poecilia ANCESTRAL SPECIES 73 ENSGT00940000166692 ENSGT00390000010887.b ENSGT00940000163960.a ENSGT00940000158729 ENSGT00390000012738 ENSGT00940000169005 ENSGT00390000010028 ENSGT00640000091536 ENSGT00950000182848.c.b.b.a ENSGT00390000013601 ENSGT00940000157613 ENSGT00390000017955.c ENSGT00940000156790 ENSGT00950000183028.a.b.b ##16 ENSGT00390000015257 ENSGT00950000182941.a.a.b.e.b ##22 ENSGT00950000183163.a.a.bb ##23 ENSGT00940000154096.b.b.b.b.a ##25 ENSGT00510000048364 ENSGT00390000004808.f ##27 ENSGT00390000010118.c.a.b ENSGT00940000170176 ENSGT00950000182978.B ENSGT00940000164496.a.a ENSGT00560000078630 ENSGT01090000260093.b.f.o ENSGT01090000260093.b.e ENSGT00940000156213.r ENSGT00530000064067 ENSGT00530000063023.A.b ENSGT00390000007597 NAME_6 ANCESTRAL SPECIES 199 ENSGT00940000166692 ENSGT00390000010887.b ENSGT00940000163960.a ENSGT00940000158729 ENSGT00390000012738 ENSGT00940000169005 ENSGT00390000010028 ENSGT00640000091536 ENSGT00950000182848.c.b.b.a ENSGT00390000013601 ENSGT00940000157613 ENSGT00390000017955.c ENSGT00940000156790 ENSGT00950000183028.a.b.b ##16 ENSGT00390000015257 ENSGT00950000182941.a.a.b.e.b ##22 ENSGT00950000183163.a.a.bb ##23 ENSGT00940000154096.b.b.b.b.a ##25 ENSGT00510000048364 ENSGT00390000004808.f ##27 ENSGT00390000010118.c.a.b ENSGT00940000170176 ENSGT00950000182978.B ENSGT00940000164496.a.a Amazon molly MODERN SPECIES 658 zgc:114119 (ENSPFOG00000002726) ENSPFOG00000002334 ago4 (ENSPFOG00000001935) CLSPN (ENSPFOG00000001788) ENSPFOG00000024371 cdca5 (ENSPFOG00000001777) psmb2 (ENSPFOG00000001718) tfap2e (ENSPFOG00000001600) NCDN (ENSPFOG00000001489) KIAA0319L (ENSPFOG00000001224) cap1 (ENSPFOG00000001012) ppt1 (ENSPFOG00000000883) rragcb (ENSPFOG00000000814) #13 fhl3b (ENSPFOG00000000748) ##16 meaf6 (ENSPFOG00000000680) map7d1b (ENSPFOG00000000581) ##22 thrap3b (ENSPFOG00000000525) ##23 eva1bb (ENSPFOG00000000508) ##25 LSM10 (ENSPFOG00000020490) oscp1a (ENSPFOG00000000446) ##27 ENSPFOG00000020489 ENSPFOG00000000423 eya3 (ENSPFOG00000000356) si:ch211-195b13.1 (ENSPFOG00000000288) Ovalentaria_B ANCESTRAL SPECIES 15 ENSGT00390000008551 ENSGT00940000163648.b ENSGT00940000158729 ENSGT00390000012738 ENSGT00940000169005 ENSGT00390000010028 ENSGT00640000091536 ENSGT00950000182848.c.b.b.a ENSGT00390000013601 ENSGT00940000157613 ENSGT00390000017955.c ENSGT00940000156790 ENSGT00950000183028.a.b.b ##16 ENSGT00390000015257 ENSGT00390000011598 ENSGT00950000182941.a.a.b.e.b ##22 ENSGT00950000183163.a.a.bb ##23 ENSGT00940000154096.b.b.b.b.a ##25 ENSGT00510000048364 ENSGT00390000004808.f ##27 ENSGT00390000010118.c.a.b ENSGT00940000155107.a.a.b ##32 ENSGT00560000078630 ENSGT00950000183008.a.a.a.b ENSGT00940000160424 ENSGT00940000158242 ENSGT00950000183053.D ENSGT00390000008812.b.a ENSGT00940000158053 ENSGT00940000164496.a.a ENSGT00950000182978.B Cichlidae ANCESTRAL SPECIES 7 ENSGT00390000008551 ENSGT00940000163648.b ENSGT00940000158729 ENSGT00390000012738 ENSGT00940000169005 ENSGT00390000010028 ENSGT00640000091536 ENSGT00950000182848.c.b.b.a ENSGT00390000013601 ENSGT00940000157613 ENSGT00390000017955.c ENSGT00940000156790 ENSGT00950000183028.a.b.b ##16 ENSGT00390000015257 ENSGT00390000011598 ENSGT00950000182941.a.a.b.e.b ##22 ENSGT00950000183163.a.a.bb ##23 ENSGT00940000154096.b.b.b.b.a ##25 ENSGT00510000048364 ENSGT00390000004808.f ##27 ENSGT00390000010118.c.a.b ENSGT00940000155107.a.a.b ##32 ENSGT00560000078630 ENSGT00950000183008.a.a.a.b ENSGT00940000160424 ENSGT00940000158242 ENSGT00950000183053.D ENSGT00390000008812.b.a ENSGT00940000158053 ENSGT00940000164496.a.a ENSGT00950000182978.B Pseudocrenilabrinae ANCESTRAL SPECIES 12 ENSGT00390000008551 ENSGT00940000163648.b ENSGT00940000158729 ENSGT00390000012738 ENSGT00940000169005 ENSGT00390000010028 ENSGT00640000091536 ENSGT00950000182848.c.b.b.a ENSGT00390000013601 ENSGT00940000157613 ENSGT00390000017955.c ENSGT00940000156790 ENSGT00950000183028.a.b.b ##16 ENSGT00390000015257 ENSGT00390000011598 ENSGT00950000182941.a.a.b.e.b ##22 ENSGT00950000183163.a.a.bb ##23 ENSGT00940000154096.b.b.b.b.a ##25 ENSGT00510000048364 ENSGT00390000004808.f ##27 ENSGT00390000010118.c.a.b.j ENSGT00940000155107.a.a.b ##32 ENSGT00560000078630 ENSGT00950000183008.a.a.a.b ENSGT00940000178420 ENSGT00940000160424 ENSGT00940000158242 ENSGT00950000183053.D ENSGT00390000008812.b.a ENSGT00940000158053 ENSGT00940000164496.a.a Pseudocrenilabrinae_A ANCESTRAL SPECIES 9 ENSGT00390000008551 ENSGT00940000163648.b ENSGT00940000158729 ENSGT00390000012738 ENSGT00940000169005 ENSGT00390000010028 ENSGT00640000091536 ENSGT00950000182848.c.b.b.a ENSGT00390000013601 ENSGT00940000157613 ENSGT00390000017955.c ENSGT00940000156790 ENSGT00950000183028.a.b.b ##16 ENSGT00390000015257 ENSGT00390000011598 ENSGT00950000182941.a.a.b.e.b ##22 ENSGT00950000183163.a.a.bb ##23 ENSGT00940000154096.b.b.b.b.a ##25 ENSGT00510000048364 ENSGT00390000004808.f ##27 ENSGT00390000010118.c.a.b.j ENSGT00940000155107.a.a.b ##32 ENSGT00560000078630 ENSGT00950000183008.a.a.a.b ENSGT00940000178420 ENSGT00940000160424 ENSGT00940000158242 ENSGT00950000183053.D ENSGT00390000008812.b.a ENSGT00940000158053 ENSGT00940000164496.a.a Haplochromini ANCESTRAL SPECIES 5 ENSGT00390000008551 ENSGT00940000163648.b ENSGT00940000158729 ENSGT00390000012738 ENSGT00940000169005 ENSGT00390000010028 ENSGT00640000091536 ENSGT00950000182848.c.b.b.a ENSGT00390000013601 ENSGT00940000157613 ENSGT00390000017955.c ENSGT00940000156790 ENSGT00950000183028.a.b.b ##16 ENSGT00390000015257 ENSGT00390000011598 ENSGT00950000182941.a.a.b.e.b ##22 ENSGT00950000183163.a.a.bb ##23 ENSGT00940000154096.b.b.b.b.a ##25 ENSGT00510000048364 ENSGT00390000004808.f ##27 ENSGT01100000263769.b ENSGT01070000254348 ENSGT00940000155107.a.a.b ##32 ENSGT00560000078630 ENSGT00950000183008.a.a.a.b ENSGT00940000178420 ENSGT00940000160424 ENSGT00940000158242 ENSGT00950000183053.D ENSGT00390000008812.b.a ENSGT00940000158053 Burton s mouthbrooder MODERN SPECIES 524 c19h1orf109 (ENSHBUG00000001509) ago4 (ENSHBUG00000001525) CLSPN (ENSHBUG00000001542) ENSHBUG00000001554 cdca5 (ENSHBUG00000001559) psmb2 (ENSHBUG00000001568) tfap2e (ENSHBUG00000001580) NCDN (ENSHBUG00000001587) KIAA0319L (ENSHBUG00000001599) cap1 (ENSHBUG00000001615) ppt1 (ENSHBUG00000001625) rragcb (ENSHBUG00000001632) #13 fhl3b (ENSHBUG00000001636) ##16 meaf6 (ENSHBUG00000001648) stpg1 (ENSHBUG00000001653) map7d1b (ENSHBUG00000001680) ##22 thrap3b (ENSHBUG00000001708) ##23 eva1bb (ENSHBUG00000001719) ##25 LSM10 (ENSHBUG00000001722) oscp1a (ENSHBUG00000001728) ##27 ENSHBUG00000001735 ENSHBUG00000001743 Haplochromini_A ANCESTRAL SPECIES 5 ENSGT00390000008551 ENSGT00940000163648.b ENSGT00940000158729 ENSGT00390000012738 ENSGT00940000169005 ENSGT00390000010028 ENSGT00640000091536 ENSGT00950000182848.c.b.b.a ENSGT00390000013601 ENSGT00940000157613 ENSGT00390000017955.c ENSGT00940000156790 ENSGT00950000183028.a.b.b ##16 ENSGT00390000015257 ENSGT00390000011598 ENSGT00950000182941.a.a.b.e.b ##22 ENSGT00950000183163.a.a.bb ##23 ENSGT00940000154096.b.b.b.b.a ##25 ENSGT00510000048364 ENSGT00390000004808.f ##27 ENSGT01100000263769.b ENSGT01070000254348 ENSGT00940000155107.a.a.b ##32 ENSGT00560000078630 ENSGT00950000183008.a.a.a.b ENSGT00940000178420 ENSGT00940000160424 ENSGT00940000158242 ENSGT00950000183053.D ENSGT00390000008812.b.a ENSGT00940000158053 P. nyererei MODERN SPECIES 388 ENSPNYG00000002046 ago4 (ENSPNYG00000002089) CLSPN (ENSPNYG00000002159) ENSPNYG00000002405 cdca5 (ENSPNYG00000002457) psmb2 (ENSPNYG00000002470) tfap2e (ENSPNYG00000002494) NCDN (ENSPNYG00000002533) KIAA0319L (ENSPNYG00000002650) cap1 (ENSPNYG00000002687) ppt1 (ENSPNYG00000002732) rragcb (ENSPNYG00000002775) #13 fhl3b (ENSPNYG00000002809) ##16 meaf6 (ENSPNYG00000002859) stpg1 (ENSPNYG00000002988) map7d1b (ENSPNYG00000003016) ##22 thrap3b (ENSPNYG00000003062) ##23 eva1bb (ENSPNYG00000003106) ##25 LSM10 (ENSPNYG00000003138) oscp1a (ENSPNYG00000003173) ##27 ENSPNYG00000003238 ENSPNYG00000003253 ENSPNYG00000003267 ENSPNYG00000003289 zc3h12ab (ENSPNYG00000003297) ##32 smim13 (ENSPNYG00000003320) nedd9 (ENSPNYG00000003335) ENSPNYG00000003341 TMEM170B (ENSPNYG00000003350) HIVEP1 (ENSPNYG00000003371) edn1 (ENSPNYG00000003412) Haplochromini_B ANCESTRAL SPECIES 1 ENSGT00390000008551 ENSGT00940000163648.b ENSGT00940000158729 ENSGT00390000012738 ENSGT00940000169005 ENSGT00390000010028 ENSGT00640000091536 ENSGT00950000182848.c.b.b.a ENSGT00390000013601 ENSGT00940000157613 ENSGT00390000017955.c ENSGT00940000156790 ENSGT00950000183028.a.b.b ##16 ENSGT00390000015257 ENSGT00390000011598 ENSGT00950000182941.a.a.b.e.b ##22 ENSGT00950000183163.a.a.bb ##23 ENSGT00940000154096.b.b.b.b.a ##25 ENSGT00510000048364 ENSGT00390000004808.f ##27 ENSGT00390000010118.c.a.b.j ENSGT01090000260364.b.b.a ENSGT00390000010118.c.a.b.i.a ENSGT01060000249788.a ENSGT01070000254348.a ENSGT01070000254348.b ENSGT00940000155107.a.a.b ##32 ENSGT00560000078630 ENSGT00940000178420 ENSGT00950000183008.a.a.a.b ENSGT00940000160424 Eastern happy MODERN SPECIES 13 ENSACLG00000005287 ago4 (ENSACLG00000005181) CLSPN (ENSACLG00000005132) ENSACLG00000005127 ENSACLG00000005115 psmb2 (ENSACLG00000005086) tfap2e (ENSACLG00000005058) NCDN (ENSACLG00000005026) KIAA0319L (ENSACLG00000004999) cap1 (ENSACLG00000004977) ppt1 (ENSACLG00000004957) rragcb (ENSACLG00000004938) #13 fhl3b (ENSACLG00000004926) ##16 meaf6 (ENSACLG00000004907) stpg1 (ENSACLG00000004902) map7d1b (ENSACLG00000004864) ##22 thrap3b (ENSACLG00000004763) ##23 eva1bb (ENSACLG00000004750) ##25 LSM10 (ENSACLG00000004728) oscp1a (ENSACLG00000004687) ##27 ENSACLG00000004680 ENSACLG00000004674 ENSACLG00000004658 ENSACLG00000004641 ENSACLG00000004617 ENSACLG00000004607 ENSACLG00000004542 ENSACLG00000004517 ENSACLG00000004502 zc3h12ab (ENSACLG00000004488) ##32 smim13 (ENSACLG00000004481) Zebra mbuna MODERN SPECIES 1104 ENSMZEG00005026347 ago4 (ENSMZEG00005026346) CLSPN (ENSMZEG00005026344) ENSMZEG00005026343 ENSMZEG00005026340 psmb2 (ENSMZEG00005026338) tfap2e (ENSMZEG00005026336) NCDN (ENSMZEG00005026335) KIAA0319L (ENSMZEG00005026332) cap1 (ENSMZEG00005026329) ppt1 (ENSMZEG00005026327) rragcb (ENSMZEG00005026324) #13 fhl3b (ENSMZEG00005026323) ##16 meaf6 (ENSMZEG00005026320) stpg1 (ENSMZEG00005026316) map7d1b (ENSMZEG00005026312) ##22 thrap3b (ENSMZEG00005026309) ##23 eva1bb (ENSMZEG00005026308) ##25 LSM10 (ENSMZEG00005026307) oscp1a (ENSMZEG00005026304) ##27 ENSMZEG00005026303 ENSMZEG00005026301 ENSMZEG00005026299 ENSMZEG00005026298 ENSMZEG00005026296 ENSMZEG00005026294 ENSMZEG00005026293 ENSMZEG00005026291 ENSMZEG00005026289 zc3h12ab (ENSMZEG00005026287) ##32 smim13 (ENSMZEG00005026286) Lyretail cichlid MODERN SPECIES 322 ENSNBRG00000013473 ago4 (ENSNBRG00000013492) CLSPN (ENSNBRG00000013539) ENSNBRG00000013713 ENSNBRG00000013760 psmb2 (ENSNBRG00000013797) tfap2e (ENSNBRG00000013819) ENSNBRG00000013858 ENSNBRG00000013921 cap1 (ENSNBRG00000013979) ppt1 (ENSNBRG00000014017) rragcb (ENSNBRG00000014036) #13 fhl3b (ENSNBRG00000014055) ##16 meaf6 (ENSNBRG00000014080) stpg1 (ENSNBRG00000014134) map7d1b (ENSNBRG00000014183) ##22 thrap3b (ENSNBRG00000014237) ##23 eva1bb (ENSNBRG00000014294) ##25 LSM10 (ENSNBRG00000014306) oscp1a (ENSNBRG00000014319) ##27 ENSNBRG00000014359 zc3h12ab (ENSNBRG00000014376) ##32 smim13 (ENSNBRG00000014425) nedd9 (ENSNBRG00000014432) ENSNBRG00000014486 TMEM170B (ENSNBRG00000014493) HIVEP1 (ENSNBRG00000014508) edn1 (ENSNBRG00000014550) si:dkeyp-92c9.2 (ENSNBRG00000014568) myo1g (ENSNBRG00000014579) si:ch211-195b13.1 (ENSNBRG00000014644) Nile tilapia MODERN SPECIES 13 ENSONIG00000020903 ago4 (ENSONIG00000013603) CLSPN (ENSONIG00000013618) ENSONIG00000032443 cdca5 (ENSONIG00000013627) psmb2 (ENSONIG00000013628) tfap2e (ENSONIG00000013632) NCDN (ENSONIG00000013638) KIAA0319L (ENSONIG00000013646) cap1 (ENSONIG00000013650) ppt1 (ENSONIG00000013654) rragcb (ENSONIG00000013658) #13 fhl3b (ENSONIG00000016304) ##16 meaf6 (ENSONIG00000013665) stpg1 (ENSONIG00000013668) map7d1b (ENSONIG00000013670) ##22 thrap3b (ENSONIG00000013673) ##23 eva1bb (ENSONIG00000013681) ##25 LSM10 (ENSONIG00000020904) oscp1a (ENSONIG00000013682) ##27 ENSONIG00000032030 ENSONIG00000039124 ENSONIG00000013684 ENSONIG00000028012 ENSONIG00000032847 ENSONIG00000035261 zc3h12ab (ENSONIG00000013685) ##32 smim13 (ENSONIG00000042839) nedd9 (ENSONIG00000013688) ENSONIG00000027700 tmem170b (ENSONIG00000027709) Midas cichlid MODERN SPECIES 1145 ago4 (ENSACIG00000014548) ENSACIG00000014590 CLSPN (ENSACIG00000014619) ENSACIG00000014975 cdca5 (ENSACIG00000014987) psmb2 (ENSACIG00000014995) tfap2e (ENSACIG00000015015) ENSACIG00000015036 KIAA0319L (ENSACIG00000015054) cap1 (ENSACIG00000015108) ppt1 (ENSACIG00000015133) rragcb (ENSACIG00000015168) #13 fhl3b (ENSACIG00000015186) ##16 meaf6 (ENSACIG00000015202) stpg1 (ENSACIG00000015255) map7d1b (ENSACIG00000015299) ##22 thrap3b (ENSACIG00000015331) ##23 eva1bb (ENSACIG00000015385) ##25 LSM10 (ENSACIG00000015420) oscp1a (ENSACIG00000015426) ##27 ENSACIG00000015456 ENSACIG00000015467 ENSACIG00000015475 Pomacentridae ANCESTRAL SPECIES 95 ENSGT00390000008551 ENSGT00940000163648.b ENSGT00940000158729.o ENSGT00390000012738 ENSGT00940000169005 ENSGT00390000010028 ENSGT00640000091536.u ENSGT00950000182848.c.b.b.a ENSGT00390000013601 ENSGT00940000157613 ENSGT00390000017955.c ENSGT00940000156790 ENSGT00950000183028.a.b.b ##16 ENSGT00390000015257 ENSGT00390000011598 ENSGT00950000182941.a.a.b.e.b ##22 ENSGT00950000183163.a.a.bb ##23 ENSGT00940000154096.b.b.b.b.a ##25 ENSGT00510000048364 ENSGT00390000004808.f ##27 ENSGT00390000010118.c.a.b ENSGT00940000155107.a.a.b ##32 ENSGT00560000078630 ENSGT00950000183008.a.a.a.b ENSGT00940000160424 ENSGT00940000158242 ENSGT00950000183053.D ENSGT00390000008812.b.a ENSGT00940000158053 ENSGT00940000164496.a.a ENSGT00950000182978.B Pomacentridae_A ANCESTRAL SPECIES ENSGT00950000182941.a.a.b.e.b ##22 Spiny chromis MODERN SPECIES 328 map7d1b (ENSAPOG00000002841) ##22 ncln (ENSAPOG00000002896) s1pr4 (ENSAPOG00000002927) MYO9B (ENSAPOG00000003038) use1 (ENSAPOG00000003076) ENSAPOG00000003094 insrb (ENSAPOG00000003154) ARHGEF18 (ENSAPOG00000003252) Amphiprion ANCESTRAL SPECIES ENSGT00950000182941.a.a.b.e.b ##22 Clown anemonefish MODERN SPECIES 3609 map7d1b (ENSAOCG00000002968) ##22 mitd1 (ENSAOCG00000002973) mrpl30 (ENSAOCG00000002976) txndc9 (ENSAOCG00000002981) Bicolor damselfish DUPLICATION Bicolor damselfish MODERN SPECIES 1878 ppt1 (ENSSPAG00000014289) rragcb (ENSSPAG00000014315) #13 fhl3b (ENSSPAG00000014341) ##16 meaf6 (ENSSPAG00000014360) map7d1b (ENSSPAG00000014371) ##22 ENSSPAG00000014399 ENSSPAG00000014411 ##22 Bicolor damselfish MODERN SPECIES 1878 ppt1 (ENSSPAG00000014289) rragcb (ENSSPAG00000014315) #13 fhl3b (ENSSPAG00000014341) ##16 meaf6 (ENSSPAG00000014360) map7d1b (ENSSPAG00000014371) ##22 ENSSPAG00000014399 ENSSPAG00000014411 ##22 Percomorphaceae_C ANCESTRAL SPECIES 15 ENSGT00390000008551 ENSGT00940000163648.b ENSGT00940000158729 ENSGT00390000012738 ENSGT00940000169005 ENSGT00390000010028 ENSGT00640000091536 ENSGT00950000182848.c.b.b.a ENSGT00390000013601 ENSGT00940000157613 ENSGT00390000017955.c ENSGT00940000156790 ENSGT00950000183028.a.b.b ##16 ENSGT00390000015257 ENSGT00390000011598 ENSGT00950000182941.a.a.b.e.b ##22 ENSGT00950000183163.a.a.bb ##23 ENSGT00940000154096.b.b.b.b.a ##25 ENSGT00510000048364 ENSGT00390000004808.f ##27 ENSGT00390000010118.c.a.b ENSGT00940000155107.a.a.b ##32 ENSGT00560000078630 ENSGT00950000183008.a.a.a.b ENSGT00940000160424 ENSGT00940000158242 ENSGT00950000183053.D ENSGT00390000008812.b.a ENSGT00940000158053 ENSGT00940000164496.a.a ENSGT00950000182978.B Percomorphaceae_D ANCESTRAL SPECIES 14 ENSGT00390000008551 ENSGT00940000163648.b ENSGT00940000158729 ENSGT00390000012738 ENSGT00940000169005 ENSGT00390000010028 ENSGT00640000091536 ENSGT00950000182848.c.b.b.a ENSGT00390000013601 ENSGT00940000157613 ENSGT00390000017955.c ENSGT00940000156790 ENSGT00950000183028.a.b.b ##16 ENSGT00390000015257 ENSGT00390000011598 ENSGT00950000182941.a.a.b.e.b ##22 ENSGT00950000183163.a.a.bb ##23 ENSGT00940000154096.b.b.b.b.a ##25 ENSGT00510000048364 ENSGT00390000004808.f ##27 ENSGT00390000010118.c.a.b ENSGT00940000155107.a.a.b ##32 ENSGT00560000078630 ENSGT00950000183008.a.a.a.b ENSGT00940000160424 ENSGT00940000158242 ENSGT00950000183053.D ENSGT00390000008812.b.a ENSGT00940000158053 ENSGT00940000164496.a.a ENSGT00950000182978.B Carangaria ANCESTRAL SPECIES 14 ENSGT00390000008551 ENSGT00940000163648.b ENSGT00940000158729 ENSGT00390000012738 ENSGT00940000169005 ENSGT00390000010028 ENSGT00640000091536 ENSGT00950000182848.c.b.b.a ENSGT00390000013601 ENSGT00940000157613 ENSGT00390000017955.c ENSGT00940000156790 ENSGT00950000183028.a.b.b ##16 ENSGT00390000015257 ENSGT00390000011598 ENSGT00950000182941.a.a.b.e.b ##22 ENSGT00950000183163.a.a.bb ##23 ENSGT00940000154096.b.b.b.b.a ##25 ENSGT00510000048364 ENSGT00390000004808.f ##27 ENSGT00390000010118.c.a.b ENSGT00940000155107.a.a.b ##32 ENSGT00560000078630 ENSGT00950000183008.a.a.a.b ENSGT00940000160424 ENSGT00940000158242 ENSGT00950000183053.D ENSGT00390000008812.b.a ENSGT00940000158053 ENSGT00940000164496.a.a ENSGT00950000182978.B Carangaria_A ANCESTRAL SPECIES 16 ENSGT00390000008551 ENSGT00940000163648.b ENSGT00940000158729 ENSGT00390000012738 ENSGT00940000169005 ENSGT00390000010028 ENSGT00640000091536 ENSGT00950000182848.c.b.b.a ENSGT00390000013601 ENSGT00940000157613 ENSGT00390000017955.c ENSGT00940000156790 ENSGT00950000183028.a.b.b ##16 ENSGT00390000015257 ENSGT00390000011598 ENSGT00950000182941.a.a.b.e.b ##22 ENSGT00950000183163.a.a.bb ##23 ENSGT00940000154096.b.b.b.b.a ##25 ENSGT00510000048364 ENSGT00390000004808.f ##27 ENSGT00390000010118.c.a.b ENSGT00940000155107.a.a.b ##32 ENSGT00560000078630 ENSGT00950000183008.a.a.a.b ENSGT00940000160424 ENSGT00940000158242 ENSGT00950000183053.D ENSGT00390000008812.b.a ENSGT00940000158053 ENSGT00940000164496.a.a ENSGT00950000182978.B Barramundi perch MODERN SPECIES 14 LOXL4 (ENSLCAG00010004189) zgc:123010 (ENSLCAG00010004184) pyroxd2 (ENSLCAG00010004145) slc25a28 (ENSLCAG00010004135) nkx3.3 (ENSLCAG00010004133) nkx2.3 (ENSLCAG00010004130) got1 (ENSLCAG00010004125) CNNM1 (ENSLCAG00010004120) HPSE2 (ENSLCAG00010004113) hps1 (ENSLCAG00010004110) st3gal7 (ENSLCAG00010004103) ENSLCAG00010004098 morn4 (ENSLCAG00010004090) ENSLCAG00010004086 ENSLCAG00010004083 map7d1b (ENSLCAG00010004081) ##22 ENSLCAG00010004074 LSM10 (ENSLCAG00010004071) oscp1a (ENSLCAG00010004068) ##27 ENSLCAG00010004066 zc3h12ab (ENSLCAG00010004058) ##32 smim13 (ENSLCAG00010004056) Seriola ANCESTRAL SPECIES 42 ENSGT00390000015257 ENSGT00390000011598 ENSGT00950000182941.a.a.b.e.b ##22 ENSGT00950000183163.a.a.bb ##23 ENSGT00940000154096.b.b.b.b.a ##25 ENSGT00510000048364 ENSGT00390000004808.f ##27 ENSGT00390000010118.c.a.b ENSGT00940000155107.a.a.b ##32 ENSGT00560000078630 ENSGT00950000183008.a.a.a.b ENSGT00940000160424 ENSGT00940000158242 ENSGT00950000183053.D ENSGT00390000008812.b.a ENSGT00940000158053 ENSGT00940000164496.a.a ENSGT00950000182978.B Greater amberjack MODERN SPECIES 94 meaf6 (ENSSDUG00000006968) stpg1 (ENSSDUG00000006981) map7d1b (ENSSDUG00000007025) ##22 thrap3b (ENSSDUG00000007054) ##23 eva1bb (ENSSDUG00000007086) ##25 LSM10 (ENSSDUG00000007090) oscp1a (ENSSDUG00000007103) ##27 ENSSDUG00000007130 ENSSDUG00000007152 zc3h12ab (ENSSDUG00000007162) ##32 smim13 (ENSSDUG00000007168) nedd9 (ENSSDUG00000007176) TMEM170B (ENSSDUG00000007203) HIVEP1 (ENSSDUG00000007210) edn1 (ENSSDUG00000007218) si:dkeyp-92c9.2 (ENSSDUG00000007223) myo1g (ENSSDUG00000007234) si:ch211-195b13.1 (ENSSDUG00000007289) Yellowtail amberjack MODERN SPECIES 2850 ENSSLDG00000009021 meaf6 (ENSSLDG00000009035) stpg1 (ENSSLDG00000009059) map7d1b (ENSSLDG00000009085) ##22 ENSSLDG00000009184 thrap3b (ENSSLDG00000009210) ##23 eva1bb (ENSSLDG00000009233) ##25 oscp1a (ENSSLDG00000009259) ##27 ENSSLDG00000009301 zc3h12ab (ENSSLDG00000009317) ##32 smim13 (ENSSLDG00000009331) nedd9 (ENSSLDG00000009345) TMEM170B (ENSSLDG00000009358) HIVEP1 (ENSSLDG00000009376) Pleuronectoidei ANCESTRAL SPECIES 33 ENSGT00940000163648.b ENSGT00940000158729 ENSGT00390000012738 ENSGT00940000169005 ENSGT00390000010028 ENSGT00640000091536 ENSGT00950000182848.c.b.b.a ENSGT00390000013601 ENSGT00940000157613 ENSGT00390000017955.c ENSGT00940000156790 ENSGT00950000183031.A.a.a #13 ENSGT00950000183028.a.b.b ##16 ENSGT00390000015257 ENSGT00390000011598 ENSGT00950000182941.a.a.b.e.b ##22 ENSGT00950000183163.a.a.bb ##23 ENSGT00940000154096.b.b.b.b.a ##25 ENSGT00510000048364 ENSGT00390000004808.f ##27 ENSGT00940000177439 ENSGT00940000155107.a.a.b ##32 ENSGT00560000078630 ENSGT00950000183008.a.a.a.b ENSGT00940000160424 ENSGT00940000158242 ENSGT00950000183053.D ENSGT00390000008812.b.a ENSGT00940000158053 ENSGT00940000164496.a.a ENSGT00950000182978.B Tongue sole MODERN SPECIES 9 ENSCSEG00000010728 ago4 (ENSCSEG00000010696) CLSPN (ENSCSEG00000010681) ENSCSEG00000010661 cdca5 (ENSCSEG00000010655) psmb2 (ENSCSEG00000010643) tfap2e (ENSCSEG00000010632) NCDN (ENSCSEG00000010623) ENSCSEG00000010571 cap1 (ENSCSEG00000010543) ppt1 (ENSCSEG00000010527) rragcb (ENSCSEG00000010508) #13 fhl3b (ENSCSEG00000010500) ##16 meaf6 (ENSCSEG00000010482) stpg1 (ENSCSEG00000010471) map7d1b (ENSCSEG00000010416) ##22 thrap3b (ENSCSEG00000010392) ##23 eva1bb (ENSCSEG00000010382) ##25 LSM10 (ENSCSEG00000010374) oscp1a (ENSCSEG00000010362) ##27 zc3h12ab (ENSCSEG00000010348) ##32 smim13 (ENSCSEG00000010342) nedd9 (ENSCSEG00000010325) TMEM170B (ENSCSEG00000010318) HIVEP1 (ENSCSEG00000010301) edn1 (ENSCSEG00000010290) si:dkeyp-92c9.2 (ENSCSEG00000010283) myo1g (ENSCSEG00000010242) si:ch211-195b13.1 (ENSCSEG00000010202) eya3 (ENSCSEG00000010177) ENSCSEG00000010138 Turbot MODERN SPECIES 14 ENSSMAG00000000763 ENSSMAG00000000785 ago4 (ENSSMAG00000000808) CLSPN (ENSSMAG00000000941) ENSSMAG00000000955 ENSSMAG00000037330 TFAP2E (ENSSMAG00000000991) NCDN (ENSSMAG00000001017) KIAA0319L (ENSSMAG00000001024) ENSSMAG00000001063 ppt1 (ENSSMAG00000001080) rragcb (ENSSMAG00000001115) #13 fhl3b (ENSSMAG00000001140) ##16 meaf6 (ENSSMAG00000001163) stpg1 (ENSSMAG00000035705) map7d1b (ENSSMAG00000001191) ##22 thrap3b (ENSSMAG00000001259) ##23 eva1bb (ENSSMAG00000001280) ##25 LSM10 (ENSSMAG00000001297) oscp1a (ENSSMAG00000001314) ##27 ENSSMAG00000021680 zc3h12ab (ENSSMAG00000001367) ##32 smim13 (ENSSMAG00000030110) nedd9 (ENSSMAG00000001395) TMEM170B (ENSSMAG00000030357) HIVEP1 (ENSSMAG00000001439) edn1 (ENSSMAG00000001461) si:dkeyp-92c9.2 (ENSSMAG00000001471) myo1g (ENSSMAG00000001483) si:ch211-195b13.1 (ENSSMAG00000001608) eya3 (ENSSMAG00000001662) Anabantaria ANCESTRAL SPECIES 16 ENSGT00940000163648.b ENSGT00940000158729 ENSGT00390000012738 ENSGT00940000169005 ENSGT00390000010028 ENSGT00640000091536 ENSGT00950000182848.c.b.b.a ENSGT00390000013601 ENSGT00940000157613 ENSGT00390000017955.c ENSGT00940000156790 ENSGT00950000183031.A.a.a #13 ENSGT00950000183028.a.b.b ##16 ENSGT00390000015257 ENSGT00390000011598 ENSGT00950000182941.a.a.b.e.b ##22 ENSGT00950000183163.a.a.bb ##23 ENSGT00940000154096.b.b.b.b.a ##25 ENSGT00510000048364 ENSGT00390000004808.f ##27 ENSGT00390000010118.c.a.b ENSGT00940000155107.a.a.b ##32 ENSGT00560000078630 ENSGT00950000183008.a.a.a.b ENSGT00940000160424 ENSGT00940000158242 ENSGT00950000183053.D ENSGT00390000008812.b.a ENSGT00940000158053 ENSGT00940000164496.a.a ENSGT00950000182978.B Zig-zag eel MODERN SPECIES 2 ENSMAMG00000003839 ago4 (ENSMAMG00000003874) CLSPN (ENSMAMG00000003927) ENSMAMG00000003980 ENSMAMG00000003988 psmb2 (ENSMAMG00000003992) TFAP2E (ENSMAMG00000004022) NCDN (ENSMAMG00000004058) KIAA0319L (ENSMAMG00000004065) ENSMAMG00000004094 ppt1 (ENSMAMG00000004148) rragcb (ENSMAMG00000004171) #13 fhl3b (ENSMAMG00000004199) ##16 meaf6 (ENSMAMG00000004214) stpg1 (ENSMAMG00000004237) map7d1b (ENSMAMG00000004292) ##22 thrap3b (ENSMAMG00000004348) ##23 eva1bb (ENSMAMG00000025345) ##25 ENSMAMG00000028468 oscp1a (ENSMAMG00000004443) ##27 ENSMAMG00000027271 ENSMAMG00000004529 zc3h12ab (ENSMAMG00000004483) ##32 smim13 (ENSMAMG00000028528) nedd9 (ENSMAMG00000004548) TMEM170B (ENSMAMG00000024794) HIVEP1 (ENSMAMG00000004590) edn1 (ENSMAMG00000004638) si:dkeyp-92c9.2 (ENSMAMG00000027420) myo1g (ENSMAMG00000004681) si:ch211-195b13.1 (ENSMAMG00000004750) Anabantoidei ANCESTRAL SPECIES 19 ENSGT00390000008551 ENSGT00940000163648.b ENSGT00940000158729 ENSGT00390000012738 ENSGT00940000169005 ENSGT00390000010028 ENSGT00640000091536 ENSGT00950000182848.c.b.b.a ENSGT00390000013601 ENSGT00940000157613 ENSGT00390000017955.c ENSGT00940000156790 ENSGT00950000183028.a.b.b ##16 ENSGT00390000015257 ENSGT00390000011598 ENSGT00950000182941.a.a.b.e.b ##22 ENSGT00950000183163.a.a.bb ##23 ENSGT00940000154096.b.b.b.b.a ##25 ENSGT00510000048364 ENSGT00390000004808.f ##27 ENSGT00390000010118.c.a.b ENSGT00940000155107.a.a.b ##32 ENSGT00560000078630 ENSGT00950000183008.a.a.a.b ENSGT00940000160424 ENSGT00940000158242 ENSGT00950000183053.D ENSGT00390000008812.b.a ENSGT00940000158053 ENSGT00940000164496.a.a ENSGT00950000182978.B Siamese fighting fish MODERN SPECIES 2 ENSBSLG00000019513 ago4 (ENSBSLG00000019879) CLSPN (ENSBSLG00000020294) ENSBSLG00000020312 cdca5 (ENSBSLG00000020313) psmb2 (ENSBSLG00000020317) tfap2e (ENSBSLG00000020341) NCDN (ENSBSLG00000020347) KIAA0319L (ENSBSLG00000021191) cap1 (ENSBSLG00000021643) ppt1 (ENSBSLG00000021676) rragcb (ENSBSLG00000021829) #13 fhl3b (ENSBSLG00000021855) ##16 meaf6 (ENSBSLG00000021881) stpg1 (ENSBSLG00000021909) map7d1b (ENSBSLG00000021935) ##22 thrap3b (ENSBSLG00000021994) ##23 eva1bb (ENSBSLG00000022015) ##25 LSM10 (ENSBSLG00000022026) oscp1a (ENSBSLG00000022029) ##27 ENSBSLG00000022042 ENSBSLG00000022051 ##32 smim13 (ENSBSLG00000022059) nedd9 (ENSBSLG00000022070) TMEM170B (ENSBSLG00000022084) HIVEP1 (ENSBSLG00000022092) edn1 (ENSBSLG00000022107) si:dkeyp-92c9.2 (ENSBSLG00000022111) myo1g (ENSBSLG00000022131) si:ch211-195b13.1 (ENSBSLG00000022497) eya3 (ENSBSLG00000023364) Climbing perch MODERN SPECIES 2 ENSATEG00000006755 ago4 (ENSATEG00000006717) CLSPN (ENSATEG00000006697) ENSATEG00000006685 ENSATEG00000006679 psmb2 (ENSATEG00000006643) TFAP2E (ENSATEG00000006627) NCDN (ENSATEG00000006619) KIAA0319L (ENSATEG00000006607) ENSATEG00000006592 ppt1 (ENSATEG00000028900) rragcb (ENSATEG00000006525) #13 fhl3b (ENSATEG00000006513) ##16 meaf6 (ENSATEG00000006466) stpg1 (ENSATEG00000006457) map7d1b (ENSATEG00000006432) ##22 thrap3b (ENSATEG00000006350) ##23 eva1bb (ENSATEG00000006328) ##25 LSM10 (ENSATEG00000006310) oscp1a (ENSATEG00000006263) ##27 ENSATEG00000006247 zc3h12ab (ENSATEG00000006140) ##32 smim13 (ENSATEG00000006130) nedd9 (ENSATEG00000006076) TMEM170B (ENSATEG00000028130) HIVEP1 (ENSATEG00000005949) edn1 (ENSATEG00000026028) si:dkeyp-92c9.2 (ENSATEG00000005914) myo1g (ENSATEG00000005817) si:ch211-195b13.1 (ENSATEG00000028776) eya3 (ENSATEG00000005730) Eupercaria ANCESTRAL SPECIES 11 ENSGT00390000008551 ENSGT00940000163648.b ENSGT00940000158729 ENSGT00390000012738 ENSGT00940000169005 ENSGT00390000010028 ENSGT00640000091536 ENSGT00950000182848.c.b.b.a ENSGT00390000013601 ENSGT00940000157613 ENSGT00390000017955.c ENSGT00940000156790 ENSGT00950000183028.a.b.b ##16 ENSGT00390000015257 ENSGT00390000011598 ENSGT00950000182941.a.a.b.e.b ##22 ENSGT00950000183163.a.a.bb ##23 ENSGT00940000154096.b.b.b.b.a ##25 ENSGT00510000048364 ENSGT00390000004808.f ##27 ENSGT00390000010118.c.a.b ENSGT00940000155107.a.a.b ##32 ENSGT00560000078630 ENSGT00950000183008.a.a.a.b ENSGT00940000160424 ENSGT00940000158242 ENSGT00950000183053.D ENSGT00390000008812.b.a ENSGT00940000158053 ENSGT00940000164496.a.a ENSGT00950000182978.B Tetraodontidae ANCESTRAL SPECIES 43 ENSGT00390000011115 ENSGT00390000008551 ENSGT00940000163648.b ENSGT00940000158729 ENSGT00390000012738 ENSGT00940000169005 ENSGT00390000010028 ENSGT00640000091536 ENSGT00950000182848.c.b.b.a ENSGT00390000013601 ENSGT00940000157613 ENSGT00390000017955.c ENSGT00940000156790 ENSGT00950000183028.a.b.b ##16 ENSGT00390000015257 ENSGT00950000182941.a.a.b.e.b ##22 ENSGT00950000183163.a.a.bb ##23 ENSGT00940000154096.b.b.b.b.a ##25 ENSGT00510000048364 ENSGT00390000010118.c.a.b ENSGT00940000155107.a.a.b ##32 ENSGT00560000078630 ENSGT00950000183008.a.a.a.b.e ENSGT00940000160424 ENSGT00940000158242 ENSGT00950000183053.D ENSGT00390000008812.b.a ENSGT00940000158053 ENSGT00940000164496.a.a ENSGT00950000182978.B ENSGT01090000260093.b.f Fugu MODERN SPECIES 3 C1orf109 (ENSTRUG00000024339) ENSTRUG00000007934 ago4 (ENSTRUG00000008052) CLSPN (ENSTRUG00000008616) ENSTRUG00000019824 cdca5 (ENSTRUG00000008868) psmb2 (ENSTRUG00000008871) tfap2e (ENSTRUG00000008956) NCDN (ENSTRUG00000009054) KIAA0319L (ENSTRUG00000009252) cap1 (ENSTRUG00000009345) ppt1 (ENSTRUG00000009602) rragcb (ENSTRUG00000009884) #13 fhl3b (ENSTRUG00000010010) ##16 meaf6 (ENSTRUG00000010159) map7d1b (ENSTRUG00000010226) ##22 thrap3b (ENSTRUG00000010336) ##23 eva1bb (ENSTRUG00000010516) ##25 LSM10 (ENSTRUG00000010531) ENSTRUG00000025207 ENSTRUG00000010565 ##32 smim13 (ENSTRUG00000020110) smim13 (ENSTRUG00000025620) nedd9 (ENSTRUG00000010644) TMEM170B (ENSTRUG00000024077) HIVEP1 (ENSTRUG00000010871) edn1 (ENSTRUG00000024552) si:dkeyp-92c9.2 (ENSTRUG00000011007) myo1g (ENSTRUG00000011023) si:ch211-195b13.1 (ENSTRUG00000011468) eya3 (ENSTRUG00000011700) Tetraodon MODERN SPECIES 16 ENSTNIG00000017737 ENSTNIG00000017736 cdca8 (ENSTNIG00000001048) ENSTNIG00000006333 ENSTNIG00000006332 ago4 (ENSTNIG00000006331) CLSPN (ENSTNIG00000006330) ENSTNIG00000004591 NCDN (ENSTNIG00000004590) KIAA0319L (ENSTNIG00000004589) cap1 (ENSTNIG00000004588) ppt1 (ENSTNIG00000004587) rragcb (ENSTNIG00000004586) #13 fhl3b (ENSTNIG00000004585) ##16 meaf6 (ENSTNIG00000004584) map7d1b (ENSTNIG00000004583) ##22 thrap3b (ENSTNIG00000004582) ##23 eva1bb (ENSTNIG00000004581) ##25 oscp1a (ENSTNIG00000019817) ##27 zc3h12ab (ENSTNIG00000001274) ##32 msto1 (ENSTNIG00000005572) srsf4 (ENSTNIG00000005573) xkr8.3 (ENSTNIG00000005574) eya3 (ENSTNIG00000000209) si:ch211-195b13.1 (ENSTNIG00000005575) ENSTNIG00000005576 srsf4 (ENSTNIG00000000115) xkr8.3 (ENSTNIG00000003808) eya3 (ENSTNIG00000008190) si:ch211-195b13.1 (ENSTNIG00000002279) myo1g (ENSTNIG00000004555) Eupecaria_A ANCESTRAL SPECIES 12 ENSGT00390000008551 ENSGT00940000163648.b ENSGT00940000158729 ENSGT00390000012738 ENSGT00940000169005 ENSGT00390000010028 ENSGT00640000091536 ENSGT00950000182848.c.b.b.a ENSGT00390000013601 ENSGT00940000157613 ENSGT00390000017955.c ENSGT00940000156790 ENSGT00950000183028.a.b.b ##16 ENSGT00390000015257 ENSGT00390000011598 ENSGT00950000182941.a.a.b.e.b ##22 ENSGT00950000183163.a.a.bb ##23 ENSGT00940000154096.b.b.b.b.a ##25 ENSGT00510000048364 ENSGT00390000004808.f ##27 ENSGT00390000010118.c.a.b ENSGT00940000155107.a.a.b ##32 ENSGT00560000078630 ENSGT00950000183008.a.a.a.b ENSGT00940000160424 ENSGT00940000158242 ENSGT00950000183053.D ENSGT00390000008812.b.a ENSGT00940000158053 ENSGT00940000164496.a.a ENSGT00950000182978.B Ballan wrasse MODERN SPECIES 178 cap1 (ENSLBEG00000018203) ppt1 (ENSLBEG00000018087) rragcb (ENSLBEG00000018067) #13 fhl3b (ENSLBEG00000018044) ##16 meaf6 (ENSLBEG00000018002) stpg1 (ENSLBEG00000017959) map7d1b (ENSLBEG00000017860) ##22 thrap3b (ENSLBEG00000017803) ##23 eva1bb (ENSLBEG00000017790) ##25 LSM10 (ENSLBEG00000017764) ENSLBEG00000017744 oscp1a (ENSLBEG00000017707) ##27 ENSLBEG00000017687 ENSLBEG00000017654 zc3h12ab (ENSLBEG00000017593) ##32 smim13 (ENSLBEG00000017560) nedd9 (ENSLBEG00000017548) TMEM170B (ENSLBEG00000017533) HIVEP1 (ENSLBEG00000017512) edn1 (ENSLBEG00000017479) si:dkeyp-92c9.2 (ENSLBEG00000017467) myo1g (ENSLBEG00000017408) Eupecaria_B ANCESTRAL SPECIES 12 ENSGT00390000008551 ENSGT00940000163648.b ENSGT00940000158729 ENSGT00390000012738 ENSGT00940000169005 ENSGT00390000010028 ENSGT00640000091536 ENSGT00950000182848.c.b.b.a ENSGT00390000013601 ENSGT00940000157613 ENSGT00390000017955.c ENSGT00940000156790 ENSGT00950000183028.a.b.b ##16 ENSGT00390000015257 ENSGT00390000011598 ENSGT00950000182941.a.a.b.e.b ##22 ENSGT00950000183163.a.a.bb ##23 ENSGT00940000154096.b.b.b.b.a ##25 ENSGT00510000048364 ENSGT00390000004808.f ##27 ENSGT00390000010118.c.a.b ENSGT00940000155107.a.a.b ##32 ENSGT00560000078630 ENSGT00950000183008.a.a.a.b ENSGT00940000160424 ENSGT00940000158242 ENSGT00950000183053.D ENSGT00390000008812.b.a ENSGT00940000158053 ENSGT00940000164496.a.a ENSGT00950000182978.B Perciformes ANCESTRAL SPECIES 11 ENSGT00390000008551 ENSGT00940000163648.b ENSGT00940000158729 ENSGT00390000012738 ENSGT00940000169005 ENSGT00390000010028 ENSGT00640000091536 ENSGT00950000182848.c.b.b.a ENSGT00390000013601 ENSGT00940000157613 ENSGT00390000017955.c ENSGT00940000156790 ENSGT00950000183028.a.b.b ##16 ENSGT00390000015257 ENSGT00390000011598 ENSGT00950000182941.a.a.b.e.b ##22 ENSGT00950000183163.a.a.bb ##23 ENSGT00940000154096.b.b.b.b.a ##25 ENSGT00510000048364 ENSGT00390000004808.f ##27 ENSGT00390000010118.c.a.b ENSGT00940000155107.a.a.b ##32 ENSGT00560000078630 ENSGT00950000183008.a.a.a.b ENSGT00940000160424 ENSGT00940000158242 ENSGT00950000183053.D ENSGT00390000008812.b.a ENSGT00940000158053 ENSGT00940000164496.a.a ENSGT00950000182978.B Cottioidei ANCESTRAL SPECIES 16 ENSGT00390000008551 ENSGT00940000163648.b ENSGT00940000158729 ENSGT00390000012738 ENSGT00940000169005 ENSGT00390000010028 ENSGT00640000091536 ENSGT00950000182848.c.b.b.a ENSGT00390000013601 ENSGT00940000157613 ENSGT00390000017955.c ENSGT00940000156790 ENSGT00950000183028.a.b.b ##16 ENSGT00390000015257 ENSGT00390000011598 ENSGT00950000182941.a.a.b.e.b ##22 ENSGT00950000183163.a.a.bb ##23 ENSGT00940000154096.b.b.b.b.a ##25 ENSGT00510000048364 ENSGT00390000004808.f ##27 ENSGT00940000155107.a.a.b ##32 ENSGT00560000078630 ENSGT00950000183008.a.a.a.b ENSGT00940000160424 ENSGT00940000158242 ENSGT00950000183053.D ENSGT00390000008812.b.a ENSGT00940000158053 ENSGT00940000164496.a.a ENSGT00950000182978.B ENSGT01090000260093.b.f Lumpfish MODERN SPECIES 2 ENSCLMG00005022728 ago4 (ENSCLMG00005022462) CLSPN (ENSCLMG00005022434) ENSCLMG00005022430 cdca5 (ENSCLMG00005022429) psmb2 (ENSCLMG00005022422) tfap2e (ENSCLMG00005022419) NCDN (ENSCLMG00005022416) KIAA0319L (ENSCLMG00005022250) cap1 (ENSCLMG00005022185) ppt1 (ENSCLMG00005022130) rragcb (ENSCLMG00005022126) #13 fhl3b (ENSCLMG00005022125) ##16 meaf6 (ENSCLMG00005022124) stpg1 (ENSCLMG00005022122) map7d1b (ENSCLMG00005022121) ##22 thrap3b (ENSCLMG00005022119) ##23 eva1bb (ENSCLMG00005022118) ##25 LSM10 (ENSCLMG00005022117) oscp1a (ENSCLMG00005022114) ##27 zc3h12ab (ENSCLMG00005022113) ##32 smim13 (ENSCLMG00005022112) nedd9 (ENSCLMG00005022110) TMEM170B (ENSCLMG00005022109) HIVEP1 (ENSCLMG00005022108) ENSCLMG00005022107 ENSCLMG00005022106 edn1 (ENSCLMG00005022105) si:dkeyp-92c9.2 (ENSCLMG00005022104) myo1g (ENSCLMG00005021011) si:ch211-195b13.1 (ENSCLMG00005020929) Stickleback MODERN SPECIES 9 c19h1orf109 (ENSGACG00000002689) ENSGACG00000002688 ago4 (ENSGACG00000002683) ENSGACG00000002679 ENSGACG00000002678 cdca5 (ENSGACG00000002675) psmb2 (ENSGACG00000002674) tfap2e (ENSGACG00000002672) NCDN (ENSGACG00000002669) KIAA0319L (ENSGACG00000002660) cap1 (ENSGACG00000002653) ppt1 (ENSGACG00000002641) rragcb (ENSGACG00000002629) #13 fhl3b (ENSGACG00000002619) ##16 meaf6 (ENSGACG00000002615) map7d1b (ENSGACG00000002607) ##22 pkhd1l1.2 (ENSGACG00000002583) nudcd1 (ENSGACG00000002575) trhrb (ENSGACG00000002573) pleca (ENSGACG00000002566) ENSGACG00000002563 ENSGACG00000002562 slc52a2 (ENSGACG00000002556) ENSGACG00000002548 nfatc1 (ENSGACG00000002545) atp9b (ENSGACG00000002539) sall3b (ENSGACG00000002533) GALR1 (ENSGACG00000002526) ENSGACG00000002525 ENSGACG00000002516 scn1bb (ENSGACG00000002503) Perciformes_a ANCESTRAL SPECIES 14 ENSGT00940000163648.b ENSGT00940000158729 ENSGT00390000012738 ENSGT00940000169005 ENSGT00390000010028 ENSGT00640000091536 ENSGT00950000182848.c.b.b.a ENSGT00390000013601 ENSGT00940000157613 ENSGT00390000017955.c ENSGT00940000156790 ENSGT00950000183031.A.a.a #13 ENSGT00950000183028.a.b.b ##16 ENSGT00390000015257 ENSGT00390000011598 ENSGT00950000182941.a.a.b.e.b ##22 ENSGT00950000183163.a.a.bb ##23 ENSGT00940000154096.b.b.b.b.a ##25 ENSGT00510000048364 ENSGT00390000004808.f ##27 ENSGT00390000010118.c.a.b ENSGT00940000155107.a.a.b ##32 ENSGT00560000078630 ENSGT00950000183008.a.a.a.b ENSGT00940000160424 ENSGT00940000158242 ENSGT00950000183053.D ENSGT00390000008812.b.a ENSGT00940000158053 ENSGT00940000164496.a.a ENSGT00950000182978.B Pike perch MODERN SPECIES 13 ENSSLUG00000011352 ago4 (ENSSLUG00000006092) CLSPN (ENSSLUG00000005829) ENSSLUG00000005827 cdca5 (ENSSLUG00000005818) psmb2 (ENSSLUG00000005805) tfap2e (ENSSLUG00000005788) NCDN (ENSSLUG00000005782) KIAA0319L (ENSSLUG00000004935) cap1 (ENSSLUG00000004853) ppt1 (ENSSLUG00000004585) rragcb (ENSSLUG00000004552) #13 fhl3b (ENSSLUG00000004540) ##16 meaf6 (ENSSLUG00000004526) stpg1 (ENSSLUG00000004518) map7d1b (ENSSLUG00000004454) ##22 thrap3b (ENSSLUG00000004422) ##23 eva1bb (ENSSLUG00000004412) ##25 LSM10 (ENSSLUG00000004403) oscp1a (ENSSLUG00000004327) ##27 ENSSLUG00000004314 ENSSLUG00000004309 ENSSLUG00000004301 zc3h12ab (ENSSLUG00000004297) ##32 smim13 (ENSSLUG00000004292) nedd9 (ENSSLUG00000004286) TMEM170B (ENSSLUG00000004281) HIVEP1 (ENSSLUG00000004271) edn1 (ENSSLUG00000004261) si:dkeyp-92c9.2 (ENSSLUG00000004255) myo1g (ENSSLUG00000004127) Channel bull blenny MODERN SPECIES 2 ENSCGOG00000005608 ago4 (ENSCGOG00000005647) CLSPN (ENSCGOG00000008234) ENSCGOG00000008245 cdca5 (ENSCGOG00000008246) psmb2 (ENSCGOG00000008253) tfap2e (ENSCGOG00000008293) NCDN (ENSCGOG00000008308) KIAA0319L (ENSCGOG00000008351) cap1 (ENSCGOG00000009184) ppt1 (ENSCGOG00000009478) rragcb (ENSCGOG00000009623) #13 fhl3b (ENSCGOG00000009706) ##16 meaf6 (ENSCGOG00000009716) stpg1 (ENSCGOG00000009789) map7d1b (ENSCGOG00000009797) ##22 thrap3b (ENSCGOG00000009838) ##23 eva1bb (ENSCGOG00000009852) ##25 LSM10 (ENSCGOG00000009858) oscp1a (ENSCGOG00000009863) ##27 ENSCGOG00000009889 zc3h12ab (ENSCGOG00000009896) ##32 smim13 (ENSCGOG00000009899) nedd9 (ENSCGOG00000009901) TMEM170B (ENSCGOG00000009902) ENSCGOG00000009908 ENSCGOG00000009927 ENSCGOG00000009931 ENSCGOG00000009936 ENSCGOG00000009965 ENSCGOG00000009966 Eupecaria_C ANCESTRAL SPECIES 13 ENSGT00940000164552 ENSGT00390000011115 ENSGT00390000008551 ENSGT00940000163648.b ENSGT00940000158729 ENSGT00390000012738 ENSGT00640000091536 ENSGT00950000182848.c.b.b.a ENSGT00390000013601 ENSGT00940000157613 ENSGT00390000017955.c ENSGT00940000156790 ENSGT00950000183028.a.b.b ##16 ENSGT00390000015257 ENSGT00390000011598 ENSGT00950000182941.a.a.b.e.b ##22 ENSGT00950000183163.a.a.bb ##23 ENSGT00940000154096.b.b.b.b.a ##25 ENSGT00510000048364 ENSGT00390000004808.f ##27 ENSGT00390000010118.c.a.b ENSGT00940000155107.a.a.b ##32 ENSGT00560000078630 ENSGT00950000183008.a.a.a.b ENSGT00940000160424 ENSGT00940000158242 ENSGT00950000183053.D ENSGT00390000008812.b.a ENSGT00940000158053 ENSGT00940000164496.a.a ENSGT00950000182978.B Eupercaria_incertae_sedis ANCESTRAL SPECIES 10 ENSGT00390000011115 ENSGT00390000008551 ENSGT00940000163648.b ENSGT00940000158729 ENSGT00390000012738 ENSGT00640000091536 ENSGT00950000182848.c.b.b.a ENSGT00390000013601 ENSGT00940000157613 ENSGT00390000017955.c ENSGT00940000156790 ENSGT00950000183031.A.a.a #13 ENSGT00950000183028.a.b.b ##16 ENSGT00390000015257 ENSGT00390000011598 ENSGT00950000182941.a.a.b.e.b ##22 ENSGT00950000183163.a.a.bb ##23 ENSGT00940000154096.b.b.b.b.a ##25 ENSGT00510000048364 ENSGT00390000004808.f ##27 ENSGT00390000010118.c.a.b ENSGT00940000155107.a.a.b ##32 ENSGT00560000078630 ENSGT00950000183008.a.a.a.b ENSGT00940000160424 ENSGT00940000158242 ENSGT00950000183053.D ENSGT00390000008812.b.a ENSGT00940000158053 ENSGT00940000164496.a.a ENSGT00950000182978.B European seabass MODERN SPECIES 22 ENSDLAG00005030850 ENSDLAG00005013457 AGO4 (ENSDLAG00005013573) CLSPN (ENSDLAG00005016583) beta 2 (ENSDLAG00005034806) ENSDLAG00005016605 tfap2e (ENSDLAG00005016618) NCDN (ENSDLAG00005016625) KIAA0319L (ENSDLAG00005016664) ENSDLAG00005017641 ppt1 (ENSDLAG00005032737) rragcb (ENSDLAG00005018704) #13 fhl3b (ENSDLAG00005018713) ##16 meaf6 (ENSDLAG00005018732) stpg1 (ENSDLAG00005026697) map7d1b (ENSDLAG00005018751) ##22 thrap3b (ENSDLAG00005018774) ##23 eva1bb (ENSDLAG00005002280) ##25 LSM10 (ENSDLAG00005002297) oscp1a (ENSDLAG00005002331) ##27 ENSDLAG00005035131 zc3h12ab (ENSDLAG00005002900) ##32 smim13 (ENSDLAG00005002917) nedd9 (ENSDLAG00005002936) TMEM170B (ENSDLAG00005030210) HIVEP1 (ENSDLAG00005002969) edn1 (ENSDLAG00005002998) si:dkeyp-92c9.2 (ENSDLAG00005030433) myo1g (ENSDLAG00005003113) si:ch211-195b13.1 (ENSDLAG00005033105) eya3 (ENSDLAG00005005939) Large yellow croaker MODERN SPECIES 484 ago4 (ENSLCRG00005004900) CLSPN (ENSLCRG00005004867) ENSLCRG00005004866 cdca5 (ENSLCRG00005004865) psmb2 (ENSLCRG00005004853) tfap2e (ENSLCRG00005004851) NCDN (ENSLCRG00005004849) ENSLCRG00005004848 KIAA0319L (ENSLCRG00005002018) cap1 (ENSLCRG00005001693) ppt1 (ENSLCRG00005000758) rragcb (ENSLCRG00005000695) #13 fhl3b (ENSLCRG00005000684) ##16 meaf6 (ENSLCRG00005000657) stpg1 (ENSLCRG00005000640) map7d1b (ENSLCRG00005020478) ##22 thrap3b (ENSLCRG00005020473) ##23 eva1bb (ENSLCRG00005020472) ##25 LSM10 (ENSLCRG00005020471) oscp1a (ENSLCRG00005020381) ##27 ENSLCRG00005020362 zc3h12ab (ENSLCRG00005020357) ##32 smim13 (ENSLCRG00005020351) nedd9 (ENSLCRG00005020348) pip5k1aa (ENSLCRG00005020307) psmd4a (ENSLCRG00005020248) znf687b (ENSLCRG00005020231) aqp10b (ENSLCRG00005020225) hax1 (ENSLCRG00005020218) ubap2l (ENSLCRG00005020158) C1orf43 (ENSLCRG00005020121) Gilthead seabream MODERN SPECIES 17 ENSSAUG00010010430 c19h1orf109 (ENSSAUG00010010428) ago4 (ENSSAUG00010008440) CLSPN (ENSSAUG00010008404) ENSSAUG00010008403 cdca5 (ENSSAUG00010008401) psmb2 (ENSSAUG00010008400) tfap2e (ENSSAUG00010008399) NCDN (ENSSAUG00010008396) KIAA0319L (ENSSAUG00010005044) cap1 (ENSSAUG00010004535) rragcb (ENSSAUG00010004527) #13 fhl3b (ENSSAUG00010004524) ##16 ppt1 (ENSSAUG00010004438) stpg1 (ENSSAUG00010004417) map7d1b (ENSSAUG00010004404) ##22 thrap3b (ENSSAUG00010004395) ##23 eva1bb (ENSSAUG00010004385) ##25 LSM10 (ENSSAUG00010004379) ENSSAUG00010004375 oscp1a (ENSSAUG00010004367) ##27 zc3h12ab (ENSSAUG00010004363) ##32 smim13 (ENSSAUG00010004360) nedd9 (ENSSAUG00010004355) TMEM170B (ENSSAUG00010004349) HIVEP1 (ENSSAUG00010004340) edn1 (ENSSAUG00010004330) si:dkeyp-92c9.2 (ENSSAUG00010004322) myo1g (ENSSAUG00010003283) si:ch211-195b13.1 (ENSSAUG00010027518) eya3 (ENSSAUG00010027490) Cod MODERN SPECIES 14 ENSGMOG00000037177 ENSGMOG00000009525 psmb2 (ENSGMOG00000028958) TFAP2E (ENSGMOG00000009513) NCDN (ENSGMOG00000022584) KIAA0319L (ENSGMOG00000012803) ENSGMOG00000029342 ENSGMOG00000024806 ENSGMOG00000035476 ENSGMOG00000015918 ENSGMOG00000015901 rragcb (ENSGMOG00000015890) #13 fhl3b (ENSGMOG00000033464) ##16 meaf6 (ENSGMOG00000007357) stpg1 (ENSGMOG00000024695) map7d1b (ENSGMOG00000022540) ##22 ENSGMOG00000001665 thrap3b (ENSGMOG00000023763) ##23 eva1bb (ENSGMOG00000017569) ##25 LSM10 (ENSGMOG00000019832) oscp1a (ENSGMOG00000017579) ##27 ENSGMOG00000017593 ENSGMOG00000026488 zc3h12ab (ENSGMOG00000030776) ##32 smim13 (ENSGMOG00000025692) nedd9 (ENSGMOG00000030633) TMEM170B (ENSGMOG00000029827) HIVEP1 (ENSGMOG00000011398) edn1 (ENSGMOG00000034660) myo1g (ENSGMOG00000011448) si:ch211-195b13.1 (ENSGMOG00000012874) Protacanthopterygii ANCESTRAL SPECIES 12 ENSGT00940000158669 ENSGT00940000164147.a ENSGT00940000160519.a.a ENSGT00940000154450.uc ENSGT00530000063881.a.b #7 ENSGT01060000248564.a.b #8 ENSGT00940000158787 #9 ENSGT00940000159442 #10 ENSGT00390000017974.ob ##12 ENSGT01090000260070.C.a #11 ENSGT00390000017974.nb #12 ENSGT00950000183031.A.a.a #13 ENSGT00950000183028.a.b.b ##16 ENSGT00390000015257 ENSGT00390000011598 ENSGT00950000182941.a.a.b.e.b ##22 ENSGT00950000183163.a.a.bb ##23 ENSGT00940000154096.b.b.b.b.a ##25 ENSGT00510000048364 ENSGT00390000004808.f ##27 ENSGT00390000010118.c.a.b ENSGT00940000155107.a.a.b ##32 ENSGT00560000078630 ENSGT00950000183008.a.a.a.b ENSGT00940000160424 ENSGT00940000158242 ENSGT00950000183053.D ENSGT00390000008812.b.a ENSGT00940000158053 ENSGT00940000164496.a.a ENSGT00950000182978.B Salmoninae DUPLICATION Salmoninae ANCESTRAL SPECIES 362 ENSGT00550000074870.y.b.b ENSGT00910000144277.f.b.a ENSGT00390000014274 ENSGT00940000156338.b.d ENSGT00940000159312.d ENSGT00940000164147.b ENSGT00940000154450.tc.a ENSGT00940000158787.h.a #9 ENSGT01090000260070.C.b.d ##11 ENSGT00390000017974.ob.f ##12 ENSGT00950000183031.A.a.a.b #13 ENSGT00950000183028.a.b.b.f ##16 ENSGT00390000015257.h ENSGT00390000011598 ENSGT00950000182941.a.a.b.e.b.e ##22 ENSGT00950000183163.a.a.bb.c ##23 ENSGT00940000154096.b.b.b.b.a.b ##25 ENSGT00940000181189 ENSGT00510000049601.j ENSGT00390000004808.f ##27 ENSGT00390000010118.c.a.b.c ENSGT00940000155107.a.a.b.d ##32 ENSGT00560000078630 ENSGT00950000183008.a.a.a.b.g ENSGT00940000160424 ENSGT00940000158242.k ENSGT00950000183053.D.g ENSGT00990000212595 ENSGT00390000008812.b.a.c ENSGT00940000158053.u Salmoninae_a ANCESTRAL SPECIES 5 ENSGT00940000159104.d.d ENSGT00940000158587.c.a ENSGT00390000014274 ENSGT00940000156338.b.d ENSGT00940000159312.d ENSGT00940000164147.b ENSGT00940000154450.tc.a ENSGT00990000212118 ENSGT00940000158787.h.a #9 ENSGT01090000260070.C.b.d ##11 ENSGT00390000017974.ob.f ##12 ENSGT00950000183031.A.a.a.b #13 ENSGT00950000183028.a.b.b.f ##16 ENSGT00390000015257.h ENSGT00390000011598 ENSGT00950000182941.a.a.b.e.b.e ##22 ENSGT00950000183163.a.a.bb.c ##23 ENSGT00940000154096.b.b.b.b.a.b ##25 ENSGT00940000181189 ENSGT00510000049601.j ENSGT00390000004808.f ##27 ENSGT00390000010118.c.a.b.c ENSGT00940000155107.a.a.b.d ##32 ENSGT00560000078630.h ENSGT00950000183008.a.a.a.b.g ENSGT00940000160424 ENSGT00940000158242.k ENSGT00950000183053.D.g ENSGT00990000212595 ENSGT00390000008812.b.a.c ENSGT00940000158053.u Salmo ANCESTRAL SPECIES 2 ENSGT00550000074870.y.b.b ENSGT00910000144277.f.b.a ENSGT00390000014274 ENSGT00940000156338.b.d ENSGT00940000159312.d ENSGT00940000164147.b ENSGT00940000154450.tc.a ENSGT00990000212118 ENSGT00940000158787.h.a #9 ENSGT01090000260070.C.b.d ##11 ENSGT00390000017974.ob.f ##12 ENSGT00950000183031.A.a.a.b #13 ENSGT00950000183028.a.b.b.f ##16 ENSGT00390000015257.h ENSGT00390000011598 ENSGT00950000182941.a.a.b.e.b.e ##22 ENSGT00950000183163.a.a.bb.c ##23 ENSGT00940000154096.b.b.b.b.a.b ##25 ENSGT00940000181189 ENSGT00510000049601.j ENSGT00390000004808.f ##27 ENSGT00390000010118.c.a.b.c ENSGT00940000155107.a.a.b.d ##32 ENSGT00560000078630.h ENSGT00950000183008.a.a.a.b.g ENSGT00940000160424.c ENSGT00940000158242.k ENSGT00950000183053.D.g ENSGT00390000008812.b.a.c ENSGT00940000158053.u ENSGT00940000164496.a.a.b Atlantic salmon MODERN SPECIES 5 PSA2 (ENSSSAG00000026601) ENSSSAG00000020652 ccdc127 (ENSSSAG00000020001) ENSSSAG00000018117 slc9a1b (ENSSSAG00000017046) ENSSSAG00000009871 srsf10b (ENSSSAG00000104443) ENSSSAG00000009809 ENSSSAG00000009802 #9 gja9b (ENSSSAG00000009793) ##11 mycbp (ENSSSAG00000115673) ##12 ENSSSAG00000101880 #13 fhl3 (ENSSSAG00000009766) ##16 meaf6 (ENSSSAG00000009744) stpg1 (ENSSSAG00000009729) map7d1b (ENSSSAG00000009702) ##22 thrap3b (ENSSSAG00000009695) ##23 CA078 (ENSSSAG00000009689) ##25 ENSSSAG00000106209 oscp1a (ENSSSAG00000009407) ##27 ENSSSAG00000009391 zc3h12ab (ENSSSAG00000087542) ##32 ENSSSAG00000092580 nedd9 (ENSSSAG00000009361) TMEM170B (ENSSSAG00000112888) HIVEP1 (ENSSSAG00000009332) edn1 (ENSSSAG00000119261) ENSSSAG00000119580 si:dkeyp-92c9.2 (ENSSSAG00000103119) myo1g (ENSSSAG00000008639) si:ch211-195b13.1 (ENSSSAG00000008591) River trout MODERN SPECIES 29 ENSSTUG00000037835 sdha (ENSSTUG00000037969) ccdc127b (ENSSTUG00000038676) CFAP69 (ENSSTUG00000038689) slc9a1b (ENSSTUG00000038794) MAN1C1 (ENSSTUG00000039533) ENSSTUG00000039655 srsf10b (ENSSTUG00000039664) ENSSTUG00000039678 ENSSTUG00000039683 #9 mycbp (ENSSTUG00000039721) ##12 ENSSTUG00000039736 #13 fhl3b (ENSSTUG00000039744) ##16 meaf6 (ENSSTUG00000039757) stpg1 (ENSSTUG00000039823) map7d1b (ENSSTUG00000039850) ##22 thrap3b (ENSSTUG00000039900) ##23 eva1bb (ENSSTUG00000039941) ##25 ENSSTUG00000039956 gstr (ENSSTUG00000039963) oscp1a (ENSSTUG00000039983) ##27 ENSSTUG00000040003 zc3h12ab (ENSSTUG00000040008) ##32 smim13 (ENSSTUG00000040014) nedd9 (ENSSTUG00000040022) TMEM170B (ENSSTUG00000040049) HIVEP1 (ENSSTUG00000040056) edn1 (ENSSTUG00000040060) si:dkeyp-92c9.2 (ENSSTUG00000040079) myo1g (ENSSTUG00000040110) si:ch211-195b13.1 (ENSSTUG00000040952) Oncorhynchus ANCESTRAL SPECIES 16 ENSGT00390000008818 ENSGT00940000164635 ENSGT00390000014274 ENSGT00940000156338.b.d ENSGT00940000159312.d ENSGT00940000164147.b ENSGT00940000154450.tc.a ENSGT00990000212118 ENSGT00940000158787.h.a #9 ENSGT01090000260070.C.b.d ##11 ENSGT00390000017974.ob.f ##12 ENSGT00950000183031.A.a.a.b #13 ENSGT00950000183028.a.b.b.f ##16 ENSGT00390000015257.h ENSGT00390000011598 ENSGT00950000182941.a.a.b.e.b.e ##22 ENSGT00950000183163.a.a.bb.c ##23 ENSGT00940000154096.b.b.b.b.a.b ##25 ENSGT00940000181189 ENSGT00510000049601.j ENSGT00390000004808.f ##27 ENSGT00390000010118.c.a.b.c ENSGT00940000155107.a.a.b.d ##32 ENSGT00560000078630.h ENSGT00950000183008.a.a.a.b.g ENSGT00940000160424.f ENSGT00940000158242.k ENSGT00950000183053.D.g ENSGT00990000212595 ENSGT00390000008812.b.a.c ENSGT00940000158053.u Oncorhynchus_a ANCESTRAL SPECIES 6 ENSGT00550000074870.y.b.a.b ENSGT00910000144277.f.b.a ENSGT00390000014274 ENSGT00940000156338.b.d ENSGT00940000159312.d ENSGT00940000164147.b ENSGT00940000154450.tc.a ENSGT00990000212118 ENSGT00940000158787.h.a #9 ENSGT01090000260070.C.b.d ##11 ENSGT00390000017974.ob.f ##12 ENSGT00950000183031.A.a.a.b #13 ENSGT00950000183028.a.b.b.f ##16 ENSGT00390000015257.h ENSGT00390000011598 ENSGT00950000182941.a.a.b.e.b.e ##22 ENSGT00950000183163.a.a.bb.c ##23 ENSGT00940000154096.b.b.b.b.a.b ##25 ENSGT00940000181189 ENSGT00510000049601.j ENSGT00390000004808.f ##27 ENSGT00390000010118.c.a.b.c ENSGT00940000155107.a.a.b.d ##32 ENSGT00560000078630.h ENSGT00950000183008.a.a.a.b.g ENSGT00940000160424.f ENSGT00940000158242.k ENSGT00950000183053.D.g ENSGT00990000212595 ENSGT00390000008812.b.a.c ENSGT00940000158053.u Coho salmon MODERN SPECIES 5 ccdc127b (ENSOKIG00005005635) ENSOKIG00005005629 CFAP69 (ENSOKIG00005005523) slc9a1b (ENSOKIG00005004498) MAN1C1 (ENSOKIG00005022347) ENSOKIG00005022330 srsf10b (ENSOKIG00005022322) ENSOKIG00005022314 ENSOKIG00005022300 #9 gja9b (ENSOKIG00005022289) ##11 mycbp (ENSOKIG00005022266) ##12 ENSOKIG00005022253 #13 fhl3b (ENSOKIG00005022242) ##16 meaf6 (ENSOKIG00005022194) stpg1 (ENSOKIG00005022179) map7d1b (ENSOKIG00005022142) ##22 thrap3b (ENSOKIG00005022125) ##23 eva1bb (ENSOKIG00005022113) ##25 ENSOKIG00005022105 gstr (ENSOKIG00005022094) oscp1a (ENSOKIG00005022041) ##27 ENSOKIG00005022035 zc3h12ab (ENSOKIG00005022030) ##32 smim13 (ENSOKIG00005022016) nedd9 (ENSOKIG00005022006) TMEM170B (ENSOKIG00005021995) HIVEP1 (ENSOKIG00005021986) edn1 (ENSOKIG00005021979) ENSOKIG00005021969 si:dkeyp-92c9.2 (ENSOKIG00005021966) myo1g (ENSOKIG00005021794) Chinook salmon MODERN SPECIES 24 sdha (ENSOTSG00005006359) ccdc127b (ENSOTSG00005006427) ENSOTSG00005006428 CFAP69 (ENSOTSG00005006429) slc9a1b (ENSOTSG00005006434) MAN1C1 (ENSOTSG00005006586) ENSOTSG00005006591 srsf10b (ENSOTSG00005006592) ENSOTSG00005006595 #9 gja9b (ENSOTSG00005006597) ##11 mycbp (ENSOTSG00005006599) ##12 ENSOTSG00005006600 #13 fhl3b (ENSOTSG00005006601) ##16 meaf6 (ENSOTSG00005006603) stpg1 (ENSOTSG00005006604) map7d1b (ENSOTSG00005006605) ##22 thrap3b (ENSOTSG00005006607) ##23 eva1bb (ENSOTSG00005006608) ##25 ENSOTSG00005006609 gstr (ENSOTSG00005006610) oscp1a (ENSOTSG00005006612) ##27 ENSOTSG00005006617 zc3h12ab (ENSOTSG00005006618) ##32 ENSOTSG00005006620 smim13 (ENSOTSG00005006622) nedd9 (ENSOTSG00005006624) TMEM170B (ENSOTSG00005006626) HIVEP1 (ENSOTSG00005006631) edn1 (ENSOTSG00005006634) si:dkeyp-92c9.2 (ENSOTSG00005006642) myo1g (ENSOTSG00005006644) Rainbow trout MODERN SPECIES 24 ENSOMYG00000000281 ENSOMYG00000006505 ENSOMYG00000006584 slc9a1b (ENSOMYG00000007199) ENSOMYG00000008042 ENSOMYG00000008120 srsf10b (ENSOMYG00000071968) ENSOMYG00000008154 ENSOMYG00000008192 #9 gja9b (ENSOMYG00000069617) ##11 mycbp (ENSOMYG00000008266) ##12 ENSOMYG00000008221 #13 fhl3b (ENSOMYG00000008287) ##16 meaf6 (ENSOMYG00000008396) stpg1 (ENSOMYG00000008440) map7d1b (ENSOMYG00000008563) ##22 thrap3b (ENSOMYG00000008733) ##23 eva1bb (ENSOMYG00000008754) ##25 ENSOMYG00000054099 ENSOMYG00000008773 ENSOMYG00000008805 oscp1a (ENSOMYG00000008917) ##27 ENSOMYG00000008955 zc3h12ab (ENSOMYG00000058082) ##32 smim13 (ENSOMYG00000008986) nedd9 (ENSOMYG00000009014) TMEM170B (ENSOMYG00000048814) HIVEP1 (ENSOMYG00000009085) ENSOMYG00000074796 edn1 (ENSOMYG00000077425) si:dkeyp-92c9.2 (ENSOMYG00000009133) Huchen MODERN SPECIES 249 sdha (ENSHHUG00000028697) ccdc127b (ENSHHUG00000029169) ENSHHUG00000029171 CFAP69 (ENSHHUG00000029173) slc9a1b (ENSHHUG00000029191) MAN1C1 (ENSHHUG00000029227) ENSHHUG00000029263 srsf10b (ENSHHUG00000029267) ENSHHUG00000029272 #9 gja9b (ENSHHUG00000029286) ##11 mycbp (ENSHHUG00000029287) ##12 ENSHHUG00000029301 #13 fhl3b (ENSHHUG00000029346) ##16 meaf6 (ENSHHUG00000029351) stpg1 (ENSHHUG00000029428) map7d1b (ENSHHUG00000029434) ##22 thrap3b (ENSHHUG00000029460) ##23 eva1bb (ENSHHUG00000029470) ##25 ENSHHUG00000029474 gstr (ENSHHUG00000029478) oscp1a (ENSHHUG00000029498) ##27 ENSHHUG00000029507 zc3h12ab (ENSHHUG00000029509) ##32 ENSHHUG00000029512 nedd9 (ENSHHUG00000029518) TMEM170B (ENSHHUG00000029522) HIVEP1 (ENSHHUG00000029527) edn1 (ENSHHUG00000029529) ENSHHUG00000029540 si:dkeyp-92c9.2 (ENSHHUG00000029553) ENSHHUG00000029556 Salmoninae ANCESTRAL SPECIES 513 ENSGT00950000182941.a.a.b.e.b.f ##22 ENSGT00950000183163.a.a.bb.d ##23 ENSGT00940000154096.b.b.b.b.a.a ##25 ENSGT00390000010118.c.a.b.d ENSGT00940000155107.a.a.b.c ##32 ENSGT00950000183008.a.a.a.b.h ENSGT00940000158242.l ENSGT00950000183053.D.h ENSGT00390000008812.b.a.d ENSGT00940000158053.v ENSGT00940000164496.a.a.a ENSGT00950000182978.B.f ENSGT01090000260093.b.f.u ENSGT01090000260093.b.e ENSGT00940000156213.q.a ENSGT00940000156213.q.b.b Salmoninae_a ANCESTRAL SPECIES 28 ENSGT00940000157893.c.b ENSGT00390000014398 ENSGT00550000074870.y.b.a ENSGT00910000144277.f.b.b ENSGT00990000212686 ENSGT00940000157751 ENSGT00940000156338.b.c ENSGT01090000260268.B ENSGT01060000251440 ENSGT00940000154450.tc.b ENSGT00940000158787.h.b #9 ENSGT01090000260070.C.b.c ##11 ENSGT00390000017974.ob.e ##12 ENSGT00950000183028.a.b.b.e ##16 ENSGT00390000015257.g ENSGT00950000182941.a.a.b.e.b.f ##22 ENSGT00950000183163.a.a.bb.d ##23 ENSGT00940000154096.b.b.b.b.a.a ##25 ENSGT00390000010118.c.a.b.d ENSGT00940000155107.a.a.b.c ##32 ENSGT00940000156772.b.d.a ENSGT00560000078630.g ENSGT00950000183008.a.a.a.b.h ENSGT00940000158242.l ENSGT00950000183053.D.h ENSGT00390000008812.b.a.d ENSGT00940000158053.v ENSGT00940000164496.a.a.a ENSGT00950000182978.B.f ENSGT01090000260093.b.f.u ENSGT01090000260093.b.e Oncorhynchus ANCESTRAL SPECIES 29 ENSGT00980000199189.c ENSGT00530000063461.A.b.a ENSGT00940000157893.c.b ENSGT00390000014398 ENSGT00550000074870.y.b.a ENSGT00910000144277.f.b.b ENSGT00990000212686 ENSGT00940000157751 ENSGT01060000251440 ENSGT00940000154450.tc.b ENSGT00940000158787.h.b #9 ENSGT01090000260070.C.b.c ##11 ENSGT00390000017974.ob.e ##12 ENSGT00950000183028.a.b.b.e ##16 ENSGT00390000015257.g ENSGT00950000182941.a.a.b.e.b.f ##22 ENSGT00950000183163.a.a.bb.d ##23 ENSGT00940000154096.b.b.b.b.a.a ##25 ENSGT00390000010118.c.a.b.d ENSGT00940000155107.a.a.b.c ##32 ENSGT00940000156772.b.d.a ENSGT00560000078630.g ENSGT00950000183008.a.a.a.b.h ENSGT00940000160424.e.a ENSGT00940000158242.l ENSGT00950000183053.D.h ENSGT00390000008812.b.a.d ENSGT00940000158053.v ENSGT00940000164496.a.a.a ENSGT00950000182978.B.f ENSGT01090000260093.b.f.u Oncorhynchus_a ANCESTRAL SPECIES 29 ENSGT00950000182901 ENSGT00940000157893.c.b ENSGT00390000014398 ENSGT00550000074870.y.b.a.a ENSGT00910000144277.f.b.b ENSGT00990000212686 ENSGT00940000157751 ENSGT01010000222294.c.b.b.b.c.a.a.b.b.b ENSGT01060000251440 ENSGT00940000154450.tc.b ENSGT00940000158787.h.b #9 ENSGT01090000260070.C.b.c ##11 ENSGT00390000017974.ob.e ##12 ENSGT00950000183028.a.b.b.e ##16 ENSGT00390000015257.g ENSGT00950000182941.a.a.b.e.b.f ##22 ENSGT00950000183163.a.a.bb.d ##23 ENSGT00940000154096.b.b.b.b.a.a ##25 ENSGT00390000010118.c.a.b.d ENSGT00940000155107.a.a.b.c ##32 ENSGT00940000156772.b.d.a ENSGT00560000078630.g ENSGT00950000183008.a.a.a.b.h ENSGT00940000158242.l ENSGT00950000183053.D.h ENSGT00390000008812.b.a.d ENSGT00940000158053.v ENSGT00940000164496.a.a.a ENSGT00950000182978.B.f ENSGT01090000260093.b.f.u ENSGT01090000260093.b.e Coho salmon MODERN SPECIES 8 wdyhv1 (ENSOKIG00005011861) PSMA2 (ENSOKIG00005011832) SDHA (ENSOKIG00005011241) ENSOKIG00005011197 KDM1B (ENSOKIG00005008784) ENSOKIG00005008619 ENSOKIG00005008596 srsf10b (ENSOKIG00005008586) ENSOKIG00005008560 #9 gja9b (ENSOKIG00005008547) ##11 mycbp (ENSOKIG00005008503) ##12 ENSOKIG00005008490 fhl3b (ENSOKIG00005008474) ##16 meaf6 (ENSOKIG00005008377) ENSOKIG00005008358 map7d1b (ENSOKIG00005008325) ##22 thrap3b (ENSOKIG00005008296) ##23 eva1bb (ENSOKIG00005008280) ##25 ENSOKIG00005008272 ENSOKIG00005008256 zc3h12ab (ENSOKIG00005008248) ##32 ENSOKIG00005008239 smim13 (ENSOKIG00005008230) nedd9 (ENSOKIG00005008220) ENSOKIG00005008209 HIVEP1 (ENSOKIG00005008183) edn1 (ENSOKIG00005008167) si:dkeyp-92c9.2 (ENSOKIG00005008159) myo1g (ENSOKIG00005008044) si:ch211-195b13.1 (ENSOKIG00005007972) eya3 (ENSOKIG00005007614) Chinook salmon MODERN SPECIES 168 map7d1b (ENSOTSG00005040502) ##22 thrap3b (ENSOTSG00005040504) ##23 eva1bb (ENSOTSG00005040505) ##25 ENSOTSG00005040507 ENSOTSG00005040508 zc3h12ab (ENSOTSG00005040509) ##32 ENSOTSG00005040511 smim13 (ENSOTSG00005040513) nedd9 (ENSOTSG00005040514) ENSOTSG00005040515 Salmo ANCESTRAL SPECIES 2 ENSGT00940000157893.c.b ENSGT00390000014398 ENSGT00550000074870.z ENSGT00910000144277.f.b.b ENSGT00990000212686 ENSGT00940000157751 ENSGT00940000156338.b.c ENSGT01090000260268.B ENSGT01060000251440 ENSGT00940000154450.tc.b ENSGT00940000158787.h.b #9 ENSGT01090000260070.C.b.c ##11 ENSGT00390000017974.ob.e ##12 ENSGT00950000183028.a.b.b.e ##16 ENSGT00390000015257.g ENSGT00950000182941.a.a.b.e.b.f ##22 ENSGT00950000183163.a.a.bb.d ##23 ENSGT00940000154096.b.b.b.b.a.a ##25 ENSGT00390000010118.c.a.b.d ENSGT00940000155107.a.a.b.c ##32 ENSGT00940000156772.b.d.a ENSGT00560000078630.g ENSGT00950000183008.a.a.a.b.h ENSGT00940000160424.d ENSGT00940000158242.l ENSGT00950000183053.D.h ENSGT00390000008812.b.a.d ENSGT00940000158053.v ENSGT00940000164496.a.a.a ENSGT00950000182978.B.f ENSGT01090000260093.b.f.u Atlantic salmon MODERN SPECIES 19 ENSSSAG00000065020 ENSSSAG00000095756 ENSSSAG00000095425 PSA2 (ENSSSAG00000065065) sdha (ENSSSAG00000065157) ENSSSAG00000065391 ENSSSAG00000065417 ENSSSAG00000065537 ENSSSAG00000065544 fusip (ENSSSAG00000065557) ENSSSAG00000065563 #9 ENSSSAG00000065568 ##11 MYCBP (ENSSSAG00000065576) ##12 fhl3b (ENSSSAG00000029717) ##16 meaf6 (ENSSSAG00000065622) map7d1b (ENSSSAG00000065668) ##22 ENSSSAG00000120157 ENSSSAG00000107737 thrap3b (ENSSSAG00000065686) ##23 ENSSSAG00000112097 eva1bb (ENSSSAG00000065693) ##25 ENSSSAG00000097800 ENSSSAG00000082376 zc3h12ab (ENSSSAG00000065703) ##32 ENSSSAG00000065705 nedd9 (ENSSSAG00000065717) TMEM170B (ENSSSAG00000113777) HIVEP1 (ENSSSAG00000065742) edn1 (ENSSSAG00000101758) ENSSSAG00000115447 si:dkeyp-92c9.2 (ENSSSAG00000100702) River trout MODERN SPECIES 27 trps1 (ENSSTUG00000049546) ENSSTUG00000049547 wdyhv1 (ENSSTUG00000049549) ENSSTUG00000049554 sdha (ENSSTUG00000049562) ENSSTUG00000049646 KDM1B (ENSSTUG00000049671) ENSSTUG00000049820 ENSSTUG00000049824 srsf10b (ENSSTUG00000049827) ENSSTUG00000049828 #9 gja9b (ENSSTUG00000049829) ##11 mycbp (ENSSTUG00000049830) ##12 fhl3b (ENSSTUG00000049833) ##16 meaf6 (ENSSTUG00000049837) map7d1b (ENSSTUG00000049845) ##22 thrap3b (ENSSTUG00000049859) ##23 eva1bb (ENSSTUG00000049862) ##25 ENSSTUG00000049864 ENSSTUG00000049865 zc3h12ab (ENSSTUG00000049867) ##32 ENSSTUG00000049870 ENSSTUG00000049873 smim13 (ENSSTUG00000049875) nedd9 (ENSSTUG00000049876) TMEM170B (ENSSTUG00000049879) ENSSTUG00000049882 ENSSTUG00000049883 HIVEP1 (ENSSTUG00000049885) edn1 (ENSSTUG00000049892) ENSSTUG00000049896 Northern pike MODERN SPECIES 9 KDM1B (ENSELUG00000008094) CFAP69 (ENSELUG00000007995) slc9a1b (ENSELUG00000007970) ENSELUG00000034496 ENSELUG00000000287 ENSELUG00000007901 srsf10b (ENSELUG00000007888) ENSELUG00000029192 akirin1 (ENSELUG00000007858) #9 gja9b (ENSELUG00000007830) ##11 mycbp (ENSELUG00000031004) ##12 ENSELUG00000007786 #13 fhl3b (ENSELUG00000007755) ##16 meaf6 (ENSELUG00000028481) stpg1 (ENSELUG00000007684) map7d1b (ENSELUG00000007639) ##22 thrap3b (ENSELUG00000007499) ##23 eva1bb (ENSELUG00000030974) ##25 LSM10 (ENSELUG00000007452) oscp1a (ENSELUG00000007413) ##27 ENSELUG00000007378 ENSELUG00000029369 zc3h12ab (ENSELUG00000007368) ##32 smim13 (ENSELUG00000030404) nedd9 (ENSELUG00000007314) TMEM170B (ENSELUG00000007252) HIVEP1 (ENSELUG00000007223) edn1 (ENSELUG00000007183) rbm24a (ENSELUG00000007163) cap2 (ENSELUG00000007130) ENSELUG00000027226 Osteoglossiformes ANCESTRAL SPECIES 1 ENSGT00990000203527.b ENSGT00950000182894.D ENSGT00940000156338.b ENSGT00390000017974.ob ##12 ENSGT00950000183028.a.b.b ##16 ENSGT00390000011598 ENSGT00950000182941.a.a.b.e.b ##22 ENSGT00950000183163.a.a.bb ##23 ENSGT00390000010118.c.a.b ENSGT00390000004808.f ##27 ENSGT00510000048364 ENSGT00560000078630 ENSGT00950000183008.a.a.a.b ENSGT00940000160424 ENSGT00940000158242 ENSGT00950000183053.D.b ENSGT00390000008812.b.a ENSGT00940000158053.r ENSGT01100000263475.f.b.b ENSGT00940000173852 ENSGT00940000164496.a.a.i ENSGT00950000182978.B P. kingsleyae MODERN SPECIES 13 dtnbp1b (ENSPKIG00000002974) mylipa (ENSPKIG00000002991) gmpr (ENSPKIG00000003016) atxn1a (ENSPKIG00000003054) ENSPKIG00000003088 lim2.4 (ENSPKIG00000003113) USF2 (ENSPKIG00000003150) ENSPKIG00000003201 tekt2 (ENSPKIG00000003234) slc9a1b (ENSPKIG00000003284) srsf10b (ENSPKIG00000003304) ENSPKIG00000003346 #9 mycbp (ENSPKIG00000003459) ##12 fhl3b (ENSPKIG00000003480) ##16 stpg1 (ENSPKIG00000003521) map7d1b (ENSPKIG00000003598) ##22 thrap3b (ENSPKIG00000003697) ##23 LSM10 (ENSPKIG00000003728) smim13 (ENSPKIG00000003755) nedd9 (ENSPKIG00000003771) TMEM170B (ENSPKIG00000003794) HIVEP1 (ENSPKIG00000003860) edn1 (ENSPKIG00000003920) si:dkeyp-92c9.2 (ENSPKIG00000003949) myo1g (ENSPKIG00000003975) ENSPKIG00000004118 ENSPKIG00000004298 Osteoglossocephalai ANCESTRAL SPECIES ENSGT00950000182941.a.a.b.f ##22 Clupeocephala ANCESTRAL SPECIES ENSGT00950000182941.a.a.b.f ##22 Euteleosteomorpha ANCESTRAL SPECIES ENSGT00950000182941.a.a.b.f ##22 Protacanthopterygii ANCESTRAL SPECIES ENSGT00950000182941.a.a.b.f ##22 Salmoninae ANCESTRAL SPECIES ENSGT00950000182941.a.a.b.f ##22 Salmoninae_a ANCESTRAL SPECIES ENSGT00950000182941.a.a.b.f ##22 Oncorhynchus ANCESTRAL SPECIES ENSGT00950000182941.a.a.b.f ##22 Rainbow trout MODERN SPECIES 25 ENSOMYG00000049293 sh3bgrl2 (ENSOMYG00000048234) ENSOMYG00000066355 ENSOMYG00000069660 eya4 (ENSOMYG00000063960) tcf21 (ENSOMYG00000075719) ENSOMYG00000049685 ENSOMYG00000039735 ENSOMYG00000053078 ENSOMYG00000062827 aldh8a1 (ENSOMYG00000025589) ENSOMYG00000065177 myb (ENSOMYG00000061659) mtfr2 (ENSOMYG00000028410) ENSOMYG00000063382 ENSOMYG00000062619 ##22 ENSOMYG00000065195 ENSOMYG00000058349 DDX1 (ENSOMYG00000031111) nbas (ENSOMYG00000055190) ENSOMYG00000049178 ENSOMYG00000065531 ENSOMYG00000053131 lratd1 (ENSOMYG00000039116) sec63 (ENSOMYG00000068521) ENSOMYG00000061905 ENSOMYG00000077259 ENSOMYG00000026864 ENSOMYG00000071150 ENSOMYG00000031152 ENSOMYG00000067714 Spotted gar MODERN SPECIES 672 ldlrap1b (ENSLOCG00000002632) maco1b (ENSLOCG00000002652) rhd (ENSLOCG00000002671) tmem50a (ENSLOCG00000002702) mgst3b (ENSLOCG00000002714) syf2 (ENSLOCG00000002728) runx3 (ENSLOCG00000002744) clic4 (ENSLOCG00000002762) SRRM1 (ENSLOCG00000002785) rcan3 (ENSLOCG00000002797) nipal3 (ENSLOCG00000002817) ENSLOCG00000002832 ENSLOCG00000002868 stpg1 (ENSLOCG00000002882) MAP3K6 (ENSLOCG00000002899) #21 map7d1a (ENSLOCG00000002929) #22 ENSLOCG00000002939 sh3d21 (ENSLOCG00000002978) #24 cited4b (ENSLOCG00000018276) ENSLOCG00000002995 SCMH1 (ENSLOCG00000003009) foxo6b (ENSLOCG00000003028) med18 (ENSLOCG00000003042) ppp1r8a (ENSLOCG00000003050) THEMIS2 (ENSLOCG00000003069) rpa2 (ENSLOCG00000003082) eva1bb (ENSLOCG00000003102) ##25 STK40 (ENSLOCG00000003116) #26 LSM10 (ENSLOCG00000018277) oscp1a (ENSLOCG00000003127) #27 mrps15 (ENSLOCG00000003165) #29 Reedfish MODERN SPECIES 5 pigv (ENSECRG00000018504) ARID1A (ENSECRG00000018433) tbxta (ENSECRG00000018388) gpn2 (ENSECRG00000018368) gpatch3 (ENSECRG00000018324) nudc (ENSECRG00000018283) nr0b2a (ENSECRG00000018264) ENSECRG00000018244 tpbga (ENSECRG00000018227) tmem222a (ENSECRG00000018153) wdtc1 (ENSECRG00000018055) ENSECRG00000018025 ENSECRG00000017999 ENSECRG00000017973 ENSECRG00000017909 #21 map7d1a (ENSECRG00000017823) #22 ENSECRG00000017791 ENSECRG00000017775 THRAP3 (ENSECRG00000017732) #23 sh3d21 (ENSECRG00000017668) #24 ENSECRG00000017616 #30 mrps15 (ENSECRG00000017586) #29 ENSECRG00000017570 ENSECRG00000017548 oscp1a (ENSECRG00000017499) #27 LSM10 (ENSECRG00000017463) STK40 (ENSECRG00000017419) #26 eva1ba (ENSECRG00000017402) #25 GRIK3 (ENSECRG00000017341) #31 ENSECRG00000017297 #31 zc3h12ab (ENSECRG00000017281) #32 Sarcopterygii ANCESTRAL SPECIES 53 ENSGT00390000003465.b.a ENSGT00940000157613 ENSGT00390000013601 ENSGT00950000182848.c.b.b.a ENSGT00640000091536 ENSGT00390000001867 ENSGT00390000012738 ENSGT00940000158729 ENSGT00940000158568 ENSGT00940000155256 ENSGT00950000182894.D ENSGT00390000015369 ENSGT00940000154317.a.a ENSGT00390000003880.b.a ENSGT00940000164972 ENSGT00950000182941.a.a.b #22 ENSGT00950000183163.a.a #23 ENSGT00940000160627 #24 ENSGT00940000154096.b.b.b.b.a ##25 ENSGT00950000182986.b #26 ENSGT00510000048364 ENSGT00390000004808 #27 ENSGT00390000001737 #29 ENSGT00940000158915 #30 ENSGT00940000159465 #31 ENSGT00940000155107.a.a #32 ENSGT00990000203803 #34 ENSGT00390000015257 ENSGT00940000156553 #20 ENSGT00390000003012 #19 ENSGT00810000125524 #18 Tetrapoda ANCESTRAL SPECIES 60 ENSGT00390000003465.b.a ENSGT00940000157613 ENSGT00390000013601 ENSGT00950000182848.c.b.b.a ENSGT00640000091536 ENSGT00390000001867 ENSGT00390000012738 ENSGT00940000158729 ENSGT00940000158568 ENSGT00940000155256 ENSGT00950000182894.D ENSGT00390000015369 ENSGT00940000154317.a.a ENSGT00390000003880.b.a ENSGT00940000164972 ENSGT00950000182941.a.a.b #22 ENSGT00950000183163.a.a #23 ENSGT00940000160627 #24 ENSGT00940000154096.b.b.b.b.a ##25 ENSGT00950000182986.b #26 ENSGT00510000048364 ENSGT00390000004808 #27 ENSGT00940000153981.B ENSGT00940000160262 ENSGT00940000161202.b ENSGT00390000001737 #29 ENSGT00940000158915 #30 ENSGT00940000159465 #31 ENSGT00940000155107.a.a #32 ENSGT00990000203803 #34 ENSGT00390000015257 Amniota ANCESTRAL SPECIES 39 ENSGT00940000155018 ENSGT00940000157613 ENSGT00390000013601 ENSGT00950000182848.c.b.b.a ENSGT00640000091536 ENSGT00390000001867 ENSGT00390000012738 ENSGT00940000158729 ENSGT00940000158568 ENSGT00940000155256 ENSGT00950000182894.D ENSGT00390000015369 ENSGT00940000154317.a.a ENSGT00390000003880.b.a ENSGT00940000164972 ENSGT00950000182941.a.a.b #22 ENSGT00950000183163.a.a #23 ENSGT00940000160627 #24 ENSGT00940000154096.b.b.b.b.a ##25 ENSGT00950000182986.b #26 ENSGT00510000048364 ENSGT00390000004808 #27 ENSGT00940000153981.B ENSGT00940000160262 ENSGT00940000161202.b ENSGT00390000001737 #29 ENSGT00940000158915 #30 ENSGT00940000159465 #31 ENSGT00940000155107.a.a #32 ENSGT00390000015257 ENSGT00940000156553 #20 Sauria ANCESTRAL SPECIES 23 ENSGT00940000155018 ENSGT00940000157613 ENSGT00390000013601 ENSGT00950000182848.c.b.b.a ENSGT00640000091536 ENSGT00390000001867 ENSGT00390000012738 ENSGT00940000158729 ENSGT00940000158568 ENSGT00940000155256 ENSGT00950000182894.D ENSGT00390000015369 ENSGT00940000154317.a.a ENSGT00390000003880.b.a ENSGT00940000164972 ENSGT00950000182941.a.a.b #22 ENSGT00950000183163.a.a #23 ENSGT00940000160627 #24 ENSGT00940000154096.b.b.b.b.a ##25 ENSGT00950000182986.b #26 ENSGT00510000048364 ENSGT00390000004808 #27 ENSGT00940000161202.b ENSGT00390000001737 #29 ENSGT00940000158915 #30 ENSGT00940000159465 #31 ENSGT00940000155107.a.a #32 ENSGT00390000015257 ENSGT00940000156553 #20 ENSGT00390000003012 #19 ENSGT00810000125524 #18 Archelosauria ANCESTRAL SPECIES 25 ENSGT00940000155018 ENSGT00940000157613 ENSGT00390000013601 ENSGT00950000182848.c.b.b.a ENSGT00640000091536 ENSGT00390000001867 ENSGT00390000012738 ENSGT00940000158729 ENSGT00940000158568 ENSGT00940000155256 ENSGT00950000182894.D ENSGT00390000015369 ENSGT00940000154317.a.a ENSGT00390000003880.b.a ENSGT00940000164972 ENSGT00950000182941.a.a.b #22 ENSGT00950000183163.a.a #23 ENSGT00940000160627 #24 ENSGT00940000154096.b.b.b.b.a ##25 ENSGT00950000182986.b #26 ENSGT00510000048364 ENSGT00390000004808 #27 ENSGT00940000161202.b ENSGT00390000001737 #29 ENSGT00940000158915 #30 ENSGT00940000159465 #31 ENSGT00940000155107.a.a #32 ENSGT00390000015257 ENSGT00940000156553 #20 ENSGT00390000003012 #19 ENSGT00810000125524 #18 Archosauria ANCESTRAL SPECIES 22 ENSGT00940000165614 ENSGT00940000155018 ENSGT00940000157613 ENSGT00390000013601 ENSGT00950000182848.c.b.b.a ENSGT00640000091536 ENSGT00390000001867 ENSGT00390000012738 ENSGT00940000158729 ENSGT00940000158568 ENSGT00940000155256 ENSGT00950000182894.D ENSGT00390000015369 ENSGT00940000154317.a.a ENSGT00390000003880.b.a ENSGT00950000182941.a.a.b #22 ENSGT00950000183163.a.a #23 ENSGT00940000154096.b.b.b.b.a ##25 ENSGT00950000182986.b #26 ENSGT00510000048364 ENSGT00390000004808 #27 ENSGT00390000001737 #29 ENSGT00940000158915 #30 ENSGT00940000159465 #31 ENSGT00940000155107.a.a #32 ENSGT00390000015257 ENSGT00940000156553 #20 ENSGT00390000003012 #19 ENSGT00810000125524 #18 ENSGT00940000158871 #17 ENSGT00390000008551 Aves ANCESTRAL SPECIES 28 ENSGT00940000165614 ENSGT00940000155018 ENSGT00940000157613 ENSGT00390000013601 ENSGT00950000182848.c.b.b.a ENSGT00640000091536 ENSGT00390000001867 ENSGT00390000012738 ENSGT00940000158729 ENSGT00940000158568 ENSGT00940000155256 ENSGT00950000182894.D ENSGT00390000015369 ENSGT00940000154317.a.a ENSGT00390000003880.b.a ENSGT00950000182941.a.a.b #22 ENSGT00950000183163.a.a #23 ENSGT00940000154096.b.b.b.b.a ##25 ENSGT00950000182986.b #26 ENSGT00510000048364 ENSGT00390000004808 #27 ENSGT00390000001737 #29 ENSGT00940000158915 #30 ENSGT00940000159465 #31 ENSGT00940000155107.a.a #32 ENSGT00390000015257 ENSGT00940000156553 #20 ENSGT00390000003012 #19 ENSGT00810000125524 #18 ENSGT00940000158871 #17 ENSGT00390000008551 Neognathae ANCESTRAL SPECIES 26 ENSGT00940000165614 ENSGT00940000155018 ENSGT00940000157613 ENSGT00390000013601 ENSGT00950000182848.c.b.b.a ENSGT00640000091536 ENSGT00390000001867 ENSGT00390000012738 ENSGT00940000158729 ENSGT00940000158568 ENSGT00940000155256 ENSGT00950000182894.D ENSGT00390000015369 ENSGT00940000154317.a.a ENSGT00390000003880.b.a ENSGT00950000182941.a.a.b #22 ENSGT00950000183163.a.a #23 ENSGT00940000154096.b.b.b.b.a ##25 ENSGT00950000182986.b #26 ENSGT00510000048364 ENSGT00390000004808 #27 ENSGT00390000001737 #29 ENSGT00940000158915 #30 ENSGT00940000159465 #31 ENSGT00940000155107.a.a #32 ENSGT00390000015257 ENSGT00940000156553 #20 ENSGT00390000003012 #19 ENSGT00810000125524 #18 ENSGT00940000158871 #17 ENSGT00390000008551 Galloanserae ANCESTRAL SPECIES 25 ENSGT00940000159550 ENSGT00940000165614 ENSGT00940000157613 ENSGT00390000013601 ENSGT00950000182848.c.b.b.a ENSGT00640000091536 ENSGT00390000001867 ENSGT00390000012738 ENSGT00940000158729 ENSGT00940000158568 ENSGT00940000155256 ENSGT00950000182894.D ENSGT00390000015369 ENSGT00940000154317.a.a ENSGT00390000003880.b.a ENSGT00950000182941.a.a.b #22 ENSGT00950000183163.a.a #23 ENSGT00940000154096.b.b.b.b.a ##25 ENSGT00950000182986.b #26 ENSGT00510000048364 ENSGT00390000004808 #27 ENSGT00390000001737 #29 ENSGT00940000158915 #30 ENSGT00940000159465 #31 ENSGT00940000155107.a.a #32 ENSGT00390000015257 ENSGT00940000156553 #20 ENSGT00390000003012 #19 ENSGT00810000125524 #18 ENSGT00940000158871 #17 ENSGT00390000008551 Phasianidae ANCESTRAL SPECIES 24 ENSGT00940000159550 ENSGT00940000165614 ENSGT00940000157613 ENSGT00390000013601 ENSGT00950000182848.c.b.b.a.a ENSGT00640000091536 ENSGT00390000001867 ENSGT00390000012738 ENSGT00940000158729 ENSGT00940000158568 ENSGT00940000155256 ENSGT00950000182894.D ENSGT00390000015369 ENSGT00940000154317.a.a ENSGT00390000003880.b.a ENSGT00950000182941.a.a.b #22 ENSGT00950000183163.a.a #23 ENSGT00940000154096.b.b.b.b.a ##25 ENSGT00950000182986.b #26 ENSGT00510000048364 ENSGT00390000004808 #27 ENSGT00390000001737 #29 ENSGT00940000158915 #30 ENSGT00940000159465 #31 ENSGT00940000155107.a.a #32 ENSGT00390000015257 ENSGT00940000156553 #20 ENSGT00390000003012 #19 ENSGT00810000125524 #18 ENSGT00940000158871 #17 ENSGT00390000008551 Phasianidae_b ANCESTRAL SPECIES 23 ENSGT00940000156221 ENSGT00940000159550 ENSGT00940000157613 ENSGT00390000013601 ENSGT00950000182848.c.b.b.a.a ENSGT00640000091536 ENSGT00390000001867 ENSGT00390000012738 ENSGT00940000158729 ENSGT00940000158568 ENSGT00940000155256 ENSGT00950000182894.D ENSGT00390000015369 ENSGT00940000154317.a.a ENSGT00390000003880.b.a ENSGT00950000182941.a.a.b #22 ENSGT00950000183163.a.a #23 ENSGT00940000154096.b.b.b.b.a ##25 ENSGT00950000182986.b #26 ENSGT00510000048364 ENSGT00390000004808 #27 ENSGT00390000001737 #29 ENSGT00940000158915 #30 ENSGT00940000159465 #31 ENSGT00940000155107.a.a #32 ENSGT00390000015257 ENSGT00940000156553 #20 ENSGT00390000003012 #19 ENSGT00810000125524 #18 ENSGT00940000158871 #17 ENSGT00390000008551 Chicken MODERN SPECIES 15 ZMYM4 (ENSGALG00010013880) IFI27L2 (ENSGALG00010013837) KIAA0319L (ENSGALG00010013772) NCDN (ENSGALG00010013719) TFAP2E (ENSGALG00010013698) PSMB2 (ENSGALG00010015046) C1orf216 (ENSGALG00010015032) CLSPN (ENSGALG00010015027) AGO4 (ENSGALG00010015009) AGO1 (ENSGALG00010014990) AGO3 (ENSGALG00010014949) TEKT2 (ENSGALG00010014905) ADPRHL2 (ENSGALG00010018267) COL8A2 (ENSGALG00010014897) TRAPPC3 (ENSGALG00010014859) MAP7D1 (ENSGALG00010014806) #22 THRAP3 (ENSGALG00010014795) #23 EVA1B (ENSGALG00010014780) ##25 STK40 (ENSGALG00010014762) #26 LSM10 (ENSGALG00010014745) OSCP1 (ENSGALG00010018258) #27 MRPS15 (ENSGALG00010014729) #29 CSF3R (ENSGALG00010014690) #30 GRIK3 (ENSGALG00010016578) #31 ZC3H12A (ENSGALG00010016458) #32 MEAF6 (ENSGALG00010016677) SNIP1 (ENSGALG00010016613) #20 DNALI1 (ENSGALG00010016611) #19 GNL2 (ENSGALG00010016600) #18 RSPO1 (ENSGALG00010013311) #17 C1orf109 (ENSGALG00010013103) Turkey MODERN SPECIES 17 DNALI1 (ENSMGAG00000003325) #19 ENSMGAG00000003267 #18 RSPO1 (ENSMGAG00000003245) #17 ENSMGAG00000003330 #20 ENSMGAG00000003361 ENSMGAG00000003371 #32 ENSMGAG00000003413 #31 CSF3R (ENSMGAG00000003526) #30 ENSMGAG00000003573 #27 ENSMGAG00000003562 #29 ENSMGAG00000015707 ENSMGAG00000003614 #26 ENSMGAG00000018617 ##25 ENSMGAG00000003640 #23 ENSMGAG00000021587 #23 ENSMGAG00000003386 #22 ENSMGAG00000003713 ENSMGAG00000021309 ENSMGAG00000003732 TEKT2 (ENSMGAG00000003750) AGO1 (ENSMGAG00000003822) ENSMGAG00000019105 ENSMGAG00000003851 ENSMGAG00000018964 ENSMGAG00000003920 ENSMGAG00000003986 ENSMGAG00000004014 ENSMGAG00000004027 ENSMGAG00000004047 ZMYM4 (ENSMGAG00000004092) ENSMGAG00000017895 Japanese quail MODERN SPECIES 15 ENSCJPG00005017090 KIAA0319L (ENSCJPG00005017087) NCDN (ENSCJPG00005017086) ENSCJPG00005017085 ENSCJPG00005017083 PSMB2 (ENSCJPG00005017082) C1orf216 (ENSCJPG00005017080) CLSPN (ENSCJPG00005017068) AGO4 (ENSCJPG00005017064) AGO1 (ENSCJPG00005017061) AGO3 (ENSCJPG00005017055) TEKT2 (ENSCJPG00005017051) ADPRS (ENSCJPG00005017049) COL8A2 (ENSCJPG00005017048) TRAPPC3 (ENSCJPG00005017040) MAP7D1 (ENSCJPG00005017036) #22 THRAP3 (ENSCJPG00005017025) #23 EVA1B (ENSCJPG00005017024) ##25 STK40 (ENSCJPG00005017020) #26 LSM10 (ENSCJPG00005017018) OSCP1 (ENSCJPG00005016941) #27 CSF3R (ENSCJPG00005016940) #30 GRIK3 (ENSCJPG00005016444) #31 ZC3H12A (ENSCJPG00005016443) #32 MEAF6 (ENSCJPG00005016442) SNIP1 (ENSCJPG00005016441) #20 DNALI1 (ENSCJPG00005016440) #19 GNL2 (ENSCJPG00005016439) #18 RSPO1 (ENSCJPG00005016438) #17 C1orf109 (ENSCJPG00005016437) MANEAL (ENSCJPG00005016436) Anatidae DUPLICATION Anatidae ANCESTRAL SPECIES ENSGT00950000182941.a.a.b.a #22 Duck MODERN SPECIES 980 ENSAPLG00000016464 #22 Anatidae ANCESTRAL SPECIES 21 ENSGT00940000159550 ENSGT01030000238234 ENSGT00940000157613 ENSGT00390000013601 ENSGT00950000182848.c.b.b.a ENSGT00640000091536 ENSGT00390000001867 ENSGT00390000012738 ENSGT00940000158729 ENSGT00940000158568 ENSGT00940000155256 ENSGT00950000182894.D ENSGT00390000015369 ENSGT00940000154317.a.a ENSGT00390000003880.b.a ENSGT00950000182941.a.a.b.b #22 ENSGT00950000183163.a.a #23 ENSGT00940000154096.b.b.b.b.a ##25 ENSGT00950000182986.b #26 ENSGT00390000004808 #27 ENSGT00940000158915 #30 ENSGT00940000159465 #31 ENSGT00940000155107.a.a #32 ENSGT00390000015257 ENSGT00940000156553 #20 ENSGT00390000003012 #19 ENSGT00810000125524 #18 ENSGT00940000158871 #17 ENSGT00390000008551 ENSGT00390000011115 ENSGT00940000164552 Pink-footed goose MODERN SPECIES 73 TMEM35B (ENSABRG00000020823) ENSABRG00000020825 ZMYM4 (ENSABRG00000020832) ENSABRG00000020838 KIAA0319L (ENSABRG00000020845) NCDN (ENSABRG00000020848) TFAP2E (ENSABRG00000020852) PSMB2 (ENSABRG00000020856) C1orf216 (ENSABRG00000020859) CLSPN (ENSABRG00000020864) AGO3 (ENSABRG00000020889) TEKT2 (ENSABRG00000020906) ADPRS (ENSABRG00000020915) COL8A2 (ENSABRG00000020919) TRAPPC3 (ENSABRG00000020920) MAP7D1 (ENSABRG00000020951) #22 THRAP3 (ENSABRG00000021040) #23 STK40 (ENSABRG00000021045) #26 OSCP1 (ENSABRG00000021050) #27 CSF3R (ENSABRG00000021053) #30 GRIK3 (ENSABRG00000021061) #31 ZC3H12A (ENSABRG00000021065) #32 MEAF6 (ENSABRG00000021072) SNIP1 (ENSABRG00000021080) #20 DNALI1 (ENSABRG00000021085) #19 GNL2 (ENSABRG00000021088) #18 RSPO1 (ENSABRG00000021097) #17 C1orf109 (ENSABRG00000021103) CDCA8 (ENSABRG00000021106) ENSABRG00000021121 MANEAL (ENSABRG00000021131) Duck MODERN SPECIES 2794 ENSAPLG00000019608 #22 Neognathae_b ANCESTRAL SPECIES 26 ENSGT00940000165614 ENSGT00940000155018 ENSGT00940000157613 ENSGT00390000013601 ENSGT00950000182848.c.b.b.a ENSGT00640000091536 ENSGT00390000001867 ENSGT00390000012738 ENSGT00940000158729 ENSGT00940000158568 ENSGT00940000155256 ENSGT00950000182894.D ENSGT00390000015369 ENSGT00940000154317.a.a ENSGT00390000003880.b.a ENSGT00950000182941.a.a.b #22 ENSGT00950000183163.a.a #23 ENSGT00940000154096.b.b.b.b.a ##25 ENSGT00950000182986.b #26 ENSGT00510000048364 ENSGT00390000004808 #27 ENSGT00390000001737 #29 ENSGT00940000158915 #30 ENSGT00940000159465 #31 ENSGT00940000155107.a.a #32 ENSGT00390000015257 ENSGT00940000156553 #20 ENSGT00390000003012 #19 ENSGT00810000125524 #18 ENSGT00940000158871 #17 ENSGT00390000008551 Passeriformes ANCESTRAL SPECIES 23 ENSGT00940000165614 ENSGT00940000155018 ENSGT00940000157613 ENSGT00390000013601 ENSGT00950000182848.c.b.b.a ENSGT00640000091536 ENSGT00390000001867 ENSGT00390000012738 ENSGT00940000158729 ENSGT00940000158568 ENSGT00940000155256 ENSGT00950000182894.D ENSGT00390000015369 ENSGT00940000154317.a.a ENSGT00390000003880.b.a ENSGT00950000182941.a.a.b #22 ENSGT00950000183163.a.a #23 ENSGT00940000154096.b.b.b.b.a ##25 ENSGT00950000182986.b #26 ENSGT00510000048364 ENSGT00390000004808 #27 ENSGT00390000001737 #29 ENSGT00940000158915 #30 ENSGT00940000159465 #31 ENSGT00940000155107.a.a #32 ENSGT00390000015257 ENSGT00940000156553 #20 ENSGT00390000003012 #19 ENSGT00810000125524 #18 ENSGT00940000158871 #17 ENSGT00390000008551 Great tit MODERN SPECIES 15 ENSPMJG00000006658 KIAA0319L (ENSPMJG00000006673) NCDN (ENSPMJG00000006675) TFAP2E (ENSPMJG00000006676) PSMB2 (ENSPMJG00000006678) C1orf216 (ENSPMJG00000006680) CLSPN (ENSPMJG00000006682) AGO4 (ENSPMJG00000006688) ENSPMJG00000006707 ENSPMJG00000006708 AGO3 (ENSPMJG00000006709) TEKT2 (ENSPMJG00000006712) ADPRS (ENSPMJG00000006718) COL8A2 (ENSPMJG00000006720) TRAPPC3 (ENSPMJG00000006723) MAP7D1 (ENSPMJG00000006724) #22 THRAP3 (ENSPMJG00000006749) #23 EVA1B (ENSPMJG00000006755) ##25 STK40 (ENSPMJG00000006758) #26 LSM10 (ENSPMJG00000006760) OSCP1 (ENSPMJG00000006764) #27 MRPS15 (ENSPMJG00000006766) #29 CSF3R (ENSPMJG00000006768) #30 GRIK3 (ENSPMJG00000006831) #31 ZC3H12A (ENSPMJG00000006834) #32 MEAF6 (ENSPMJG00000006841) SNIP1 (ENSPMJG00000006845) #20 DNALI1 (ENSPMJG00000006847) #19 ENSPMJG00000006852 RSPO1 (ENSPMJG00000006854) #17 ENSPMJG00000006855 Passeriformes_d ANCESTRAL SPECIES 23 ENSGT00940000165614 ENSGT00940000155018 ENSGT00940000157613 ENSGT00390000013601 ENSGT00950000182848.c.b.b.a ENSGT00640000091536 ENSGT00390000001867 ENSGT00390000012738 ENSGT00940000158729 ENSGT00940000158568 ENSGT00940000155256 ENSGT00950000182894.D ENSGT00390000015369 ENSGT00940000154317.a.a ENSGT00390000003880.b.a ENSGT00950000182941.a.a.b #22 ENSGT00950000183163.a.a #23 ENSGT00940000154096.b.b.b.b.a ##25 ENSGT00950000182986.b #26 ENSGT00510000048364 ENSGT00390000004808 #27 ENSGT00390000001737 #29 ENSGT00940000158915 #30 ENSGT00940000159465 #31 ENSGT00940000155107.a.a #32 ENSGT00390000015257 ENSGT00940000156553 #20 ENSGT00390000003012 #19 ENSGT00810000125524 #18 ENSGT00940000158871 #17 ENSGT00390000008551 Passeriformes_g ANCESTRAL SPECIES 22 ENSGT00940000159550 ENSGT00940000165614 ENSGT00940000157613 ENSGT00390000013601 ENSGT00950000182848.c.b.b.a ENSGT00640000091536 ENSGT00390000001867 ENSGT00390000012738 ENSGT00940000158729 ENSGT00940000158568 ENSGT00940000155256 ENSGT00950000182894.D ENSGT00390000015369 ENSGT00940000154317.a.a ENSGT00390000003880.b.a ENSGT00950000182941.a.a.b #22 ENSGT00950000183163.a.a #23 ENSGT00940000154096.b.b.b.b.a ##25 ENSGT00950000182986.b #26 ENSGT00510000048364 ENSGT00390000004808 #27 ENSGT00390000001737 #29 ENSGT00940000158915 #30 ENSGT00940000159465 #31 ENSGT00940000155107.a.a #32 ENSGT00390000015257 ENSGT00940000156553 #20 ENSGT00390000003012 #19 ENSGT00810000125524 #18 ENSGT00940000158871 #17 ENSGT00940000164552.f.a Passeroidea ANCESTRAL SPECIES 22 ENSGT00940000159550 ENSGT00940000165614 ENSGT00940000157613 ENSGT00390000013601 ENSGT00950000182848.c.b.b.a ENSGT00640000091536 ENSGT00390000001867 ENSGT00390000012738 ENSGT00940000158729 ENSGT00940000158568 ENSGT00940000155256 ENSGT00950000182894.D ENSGT00390000015369 ENSGT00940000154317.a.a ENSGT00390000003880.b.a ENSGT00950000182941.a.a.b #22 ENSGT00950000183163.a.a #23 ENSGT00940000154096.b.b.b.b.a ##25 ENSGT00950000182986.b #26 ENSGT00510000048364 ENSGT00390000004808 #27 ENSGT00390000001737 #29 ENSGT00940000158915 #30 ENSGT00940000159465 #31 ENSGT00940000155107.a.a #32 ENSGT00390000015257 ENSGT00940000156553 #20 ENSGT00390000003012 #19 ENSGT00810000125524 #18 ENSGT00940000158871 #17 ENSGT00390000008551 Zebra finch MODERN SPECIES 16 ZMYM4 (ENSTGUG00000001709) KIAA0319L (ENSTGUG00000001687) NCDN (ENSTGUG00000001681) TFAP2E (ENSTGUG00000001672) PSMB2 (ENSTGUG00000001663) C1orf216 (ENSTGUG00000029067) CLSPN (ENSTGUG00000001651) AGO4 (ENSTGUG00000024123) ENSTGUG00000021564 AGO1 (ENSTGUG00000001631) AGO3 (ENSTGUG00000014986) TEKT2 (ENSTGUG00000001625) ADPRS (ENSTGUG00000001622) COL8A2 (ENSTGUG00000001619) TRAPPC3 (ENSTGUG00000001616) MAP7D1 (ENSTGUG00000020289) #22 THRAP3 (ENSTGUG00000001606) #23 EVA1B (ENSTGUG00000025865) ##25 STK40 (ENSTGUG00000001603) #26 LSM10 (ENSTGUG00000022736) OSCP1 (ENSTGUG00000001590) #27 MRPS15 (ENSTGUG00000024895) #29 CSF3R (ENSTGUG00000001588) #30 GRIK3 (ENSTGUG00000001569) #31 ZC3H12A (ENSTGUG00000026131) #32 MEAF6 (ENSTGUG00000001560) SNIP1 (ENSTGUG00000001544) #20 DNALI1 (ENSTGUG00000001557) #19 GNL2 (ENSTGUG00000001547) #18 RSPO1 (ENSTGUG00000001536) #17 ENSTGUG00000019470 Common canary MODERN SPECIES 49 KIAA0319L (ENSSCAG00000015436) NCDN (ENSSCAG00000015432) TFAP2E (ENSSCAG00000015421) PSMB2 (ENSSCAG00000015418) C1orf216 (ENSSCAG00000015416) CLSPN (ENSSCAG00000015411) ENSSCAG00000015409 ENSSCAG00000015404 ENSSCAG00000015403 ENSSCAG00000015399 AGO3 (ENSSCAG00000015396) TEKT2 (ENSSCAG00000015389) ADPRS (ENSSCAG00000015386) COL8A2 (ENSSCAG00000015381) TRAPPC3 (ENSSCAG00000015380) MAP7D1 (ENSSCAG00000015376) #22 THRAP3 (ENSSCAG00000015371) #23 EVA1B (ENSSCAG00000015366) ##25 STK40 (ENSSCAG00000015361) #26 OSCP1 (ENSSCAG00000015356) #27 MRPS15 (ENSSCAG00000015349) #29 CSF3R (ENSSCAG00000015342) #30 ENSSCAG00000015339 ENSSCAG00000015337 GRIK3 (ENSSCAG00000015246) #31 ZC3H12A (ENSSCAG00000015215) #32 MEAF6 (ENSSCAG00000015214) DNALI1 (ENSSCAG00000015210) #19 GNL2 (ENSSCAG00000015204) #18 RSPO1 (ENSSCAG00000015200) #17 ENSSCAG00000015197 Flycatcher MODERN SPECIES 15 SFPQ (ENSFALG00000000731) ZMYM4 (ENSFALG00000000734) ENSFALG00000024613 KIAA0319L (ENSFALG00000000740) NCDN (ENSFALG00000000742) TFAP2E (ENSFALG00000027366) PSMB2 (ENSFALG00000024999) C1orf216 (ENSFALG00000014273) CLSPN (ENSFALG00000000773) AGO1 (ENSFALG00000000790) ADPRS (ENSFALG00000028684) ENSFALG00000023448 TRAPPC3 (ENSFALG00000000832) ENSFALG00000000835 ENSFALG00000000824 MAP7D1 (ENSFALG00000000837) #22 THRAP3 (ENSFALG00000000840) #23 ENSFALG00000028751 ##25 STK40 (ENSFALG00000000846) #26 LSM10 (ENSFALG00000028374) OSCP1 (ENSFALG00000000855) #27 MRPS15 (ENSFALG00000000866) #29 CSF3R (ENSFALG00000000875) #30 GRIK3 (ENSFALG00000000886) #31 ZC3H12A (ENSFALG00000000890) #32 MEAF6 (ENSFALG00000000895) SNIP1 (ENSFALG00000000898) #20 DNALI1 (ENSFALG00000000901) #19 GNL2 (ENSFALG00000000909) #18 RSPO1 (ENSFALG00000029044) #17 ENSFALG00000023058 Neognathae_c ANCESTRAL SPECIES 31 ENSGT01050000245043 ENSGT01080000259115 ENSGT00940000157613 ENSGT00390000013601 ENSGT00950000182848.c.b.b.a ENSGT00640000091536 ENSGT00390000001867 ENSGT00390000012738 ENSGT00940000158729 ENSGT00940000158568 ENSGT00940000155256 ENSGT00950000182894.D ENSGT00390000015369 ENSGT00940000154317.a.a ENSGT00390000003880.b.a ENSGT00950000182941.a.a.b #22 ENSGT00950000183163.a.a #23 ENSGT00940000154096.b.b.b.b.a ##25 ENSGT00950000182986.b #26 ENSGT00510000048364 ENSGT00390000004808 #27 ENSGT00390000001737 #29 ENSGT00940000158915 #30 ENSGT00940000159465 #31 ENSGT00940000155107.a.a #32 ENSGT00390000015257 ENSGT00940000156553 #20 ENSGT00390000003012 #19 ENSGT00810000125524 #18 ENSGT00940000158871 #17 ENSGT00390000008551 Golden eagle MODERN SPECIES 7 ZMYM4 (ENSACCG00020007551) ENSACCG00020007509 ENSACCG00020007498 KIAA0319L (ENSACCG00020007466) NCDN (ENSACCG00020007449) TFAP2E (ENSACCG00020007424) PSMB2 (ENSACCG00020007392) CLSPN (ENSACCG00020007318) AGO4 (ENSACCG00020007268) AGO1 (ENSACCG00020007246) AGO3 (ENSACCG00020007221) TEKT2 (ENSACCG00020007198) ADPRS (ENSACCG00020007187) COL8A2 (ENSACCG00020007180) TRAPPC3 (ENSACCG00020007167) MAP7D1 (ENSACCG00020007137) #22 THRAP3 (ENSACCG00020007064) #23 EVA1B (ENSACCG00020007041) ##25 STK40 (ENSACCG00020007023) #26 LSM10 (ENSACCG00020007012) OSCP1 (ENSACCG00020016654) #27 MRPS15 (ENSACCG00020016648) #29 CSF3R (ENSACCG00020016644) #30 GRIK3 (ENSACCG00020016533) #31 ZC3H12A (ENSACCG00020016403) #32 MEAF6 (ENSACCG00020016352) SNIP1 (ENSACCG00020016338) #20 DNALI1 (ENSACCG00020016330) #19 GNL2 (ENSACCG00020016319) #18 RSPO1 (ENSACCG00020016309) #17 ENSACCG00020016301 Kakapo MODERN SPECIES 6 ENSSHBG00005010728 ENSSHBG00005010707 KIAA0319L (ENSSHBG00005005834) NCDN (ENSSHBG00005005408) TFAP2E (ENSSHBG00005005377) PSMB2 (ENSSHBG00005000735) C1orf216 (ENSSHBG00005000717) CLSPN (ENSSHBG00005000707) AGO4 (ENSSHBG00005019185) AGO1 (ENSSHBG00005017278) AGO3 (ENSSHBG00005017167) TEKT2 (ENSSHBG00005017157) ADPRS (ENSSHBG00005017149) COL8A2 (ENSSHBG00005017145) TRAPPC3 (ENSSHBG00005017143) MAP7D1 (ENSSHBG00005017141) #22 THRAP3 (ENSSHBG00005017133) #23 EVA1B (ENSSHBG00005017124) ##25 STK40 (ENSSHBG00005017111) #26 LSM10 (ENSSHBG00005017106) OSCP1 (ENSSHBG00005017104) #27 MRPS15 (ENSSHBG00005017100) #29 CSF3R (ENSSHBG00005017091) #30 GRIK3 (ENSSHBG00005017083) #31 ENSSHBG00005017076 #32 MEAF6 (ENSSHBG00005017069) SNIP1 (ENSSHBG00005017055) #20 DNALI1 (ENSSHBG00005017051) #19 GNL2 (ENSSHBG00005017044) #18 RSPO1 (ENSSHBG00005017035) #17 C1orf109 (ENSSHBG00005017031) Australian saltwater crocodile MODERN SPECIES 58 ENSCPRG00005002419 MAP7D1 (ENSCPRG00005002420) #22 THRAP3 (ENSCPRG00005002448) #23 STK40 (ENSCPRG00005002499) #26 LSM10 (ENSCPRG00005002502) OSCP1 (ENSCPRG00005002504) #27 MRPS15 (ENSCPRG00005002507) #29 ENSCPRG00005002521 #30 GRIK3 (ENSCPRG00005002528) #31 ZC3H12A (ENSCPRG00005002535) #32 MEAF6 (ENSCPRG00005002540) SNIP1 (ENSCPRG00005002543) #20 DNALI1 (ENSCPRG00005002547) #19 GNL2 (ENSCPRG00005002554) #18 RSPO1 (ENSCPRG00005002591) #17 CDCA8 (ENSCPRG00005002599) C1orf109 (ENSCPRG00005002620) Cryptodira ANCESTRAL SPECIES 31 ENSGT00940000155018 ENSGT00940000157613 ENSGT00390000013601 ENSGT00950000182848.c.b.b.a ENSGT00640000091536 ENSGT00390000001867 ENSGT00390000012738 ENSGT00940000158729 ENSGT00940000158568 ENSGT00940000155256 ENSGT00950000182894.D ENSGT00390000015369 ENSGT00940000154317.a.a ENSGT00390000003880.b.a ENSGT00940000164972 ENSGT00950000182941.a.a.b #22 ENSGT00950000183163.a.a #23 ENSGT00940000160627 #24 ENSGT00940000154096.b.b.b.b.a ##25 ENSGT00950000182986.b #26 ENSGT00510000048364 ENSGT00390000004808 #27 ENSGT00940000161202.b ENSGT00390000001737 #29 ENSGT00940000158915 #30 ENSGT00940000159465 #31 ENSGT00940000155107.a.a #32 ENSGT00390000015257 ENSGT00940000156553 #20 ENSGT00390000003012 #19 ENSGT00810000125524 #18 Testudinoidea ANCESTRAL SPECIES 27 ENSGT00940000155018 ENSGT00940000157613 ENSGT00390000013601 ENSGT00950000182848.c.b.b.a ENSGT00640000091536 ENSGT00390000001867 ENSGT00390000012738 ENSGT00940000158729 ENSGT00940000158568 ENSGT00940000155256 ENSGT00950000182894.D ENSGT00390000015369 ENSGT00940000154317.a.a ENSGT00390000003880.b.a ENSGT00940000164972 ENSGT00950000182941.a.a.b #22 ENSGT00950000183163.a.a #23 ENSGT00990000210150 ENSGT00940000154096.b.b.b.b.a ##25 ENSGT00950000182986.b #26 ENSGT00510000048364 ENSGT00390000004808 #27 ENSGT00940000161202.b ENSGT00390000001737 #29 ENSGT00940000158915 #30 ENSGT00940000159465 #31 ENSGT00940000155107.a.a #32 ENSGT00390000015257 ENSGT00940000156553 #20 ENSGT00390000003012 #19 ENSGT00810000125524 #18 Emydidae ANCESTRAL SPECIES 39 ENSGT00940000155018 ENSGT00940000157613 ENSGT00390000013601 ENSGT00950000182848.c.b.b.a ENSGT00640000091536 ENSGT00390000001867 ENSGT00390000012738 ENSGT00940000158729 ENSGT00940000158568 ENSGT00940000155256 ENSGT00950000182894.D ENSGT00390000015369 ENSGT00940000154317.a.a ENSGT00390000003880.b.a ENSGT00940000164972 ENSGT00950000182941.a.a.b #22 ENSGT00950000183163.a.a #23 ENSGT00990000210150 ENSGT00940000154096.b.b.b.b.a ##25 ENSGT00950000182986.b #26 ENSGT00510000048364 ENSGT00390000004808 #27 ENSGT00940000161202.b ENSGT00390000001737 #29 ENSGT00940000158915 #30 ENSGT00940000159465 #31 ENSGT00940000155107.a.a #32 ENSGT00390000015257 ENSGT00940000156553 #20 ENSGT00390000003012 #19 ENSGT00810000125524 #18 painted turtle MODERN SPECIES 6 ENSCPBG00000018635 KIAA0319L (ENSCPBG00000018629) NCDN (ENSCPBG00000018626) TFAP2E (ENSCPBG00000018622) PSMB2 (ENSCPBG00000018619) C1orf216 (ENSCPBG00000018616) CLSPN (ENSCPBG00000018609) AGO4 (ENSCPBG00000018602) AGO1 (ENSCPBG00000018594) AGO3 (ENSCPBG00000018583) TEKT2 (ENSCPBG00000018573) ADPRS (ENSCPBG00000018548) COL8A2 (ENSCPBG00000018546) TRAPPC3 (ENSCPBG00000018543) ENSCPBG00000018540 MAP7D1 (ENSCPBG00000018535) #22 THRAP3 (ENSCPBG00000018530) #23 EVA1B (ENSCPBG00000018526) ##25 STK40 (ENSCPBG00000018522) #26 OSCP1 (ENSCPBG00000018516) #27 ENSCPBG00000018513 MRPS15 (ENSCPBG00000018508) #29 ENSCPBG00000018503 #30 GRIK3 (ENSCPBG00000018496) #31 ZC3H12A (ENSCPBG00000018492) #32 MEAF6 (ENSCPBG00000018490) SNIP1 (ENSCPBG00000018488) #20 DNALI1 (ENSCPBG00000018486) #19 GNL2 (ENSCPBG00000018483) #18 RSPO1 (ENSCPBG00000018476) #17 C1orf109 (ENSCPBG00000018470) Three-toed box turtle MODERN SPECIES 111 KIAA0319L (ENSTMTG00000006239) NCDN (ENSTMTG00000006282) TFAP2E (ENSTMTG00000006307) PSMB2 (ENSTMTG00000006329) C1orf216 (ENSTMTG00000006346) CLSPN (ENSTMTG00000006379) AGO4 (ENSTMTG00000006524) AGO1 (ENSTMTG00000006686) AGO3 (ENSTMTG00000008722) TEKT2 (ENSTMTG00000009035) ADPRS (ENSTMTG00000009056) ENSTMTG00000009071 ENSTMTG00000009081 TRAPPC3 (ENSTMTG00000009095) ENSTMTG00000009113 MAP7D1 (ENSTMTG00000009142) #22 THRAP3 (ENSTMTG00000009191) #23 ENSTMTG00000009216 EVA1B (ENSTMTG00000009227) ##25 STK40 (ENSTMTG00000009239) #26 LSM10 (ENSTMTG00000009262) OSCP1 (ENSTMTG00000009274) #27 ENSTMTG00000009300 MRPS15 (ENSTMTG00000009309) #29 ENSTMTG00000009333 #30 GRIK3 (ENSTMTG00000009387) #31 ZC3H12A (ENSTMTG00000009698) #32 MEAF6 (ENSTMTG00000009714) SNIP1 (ENSTMTG00000009743) #20 DNALI1 (ENSTMTG00000009756) #19 GNL2 (ENSTMTG00000009773) #18 Testudinidae ANCESTRAL SPECIES 4 ENSGT00940000155018 ENSGT00940000157613 ENSGT00390000013601 ENSGT00950000182848.c.b.b.a ENSGT00640000091536 ENSGT00390000001867 ENSGT00390000012738 ENSGT00940000158729 ENSGT00940000158568 ENSGT00940000155256 ENSGT00950000182894.D ENSGT00390000015369 ENSGT00940000154317.a.a ENSGT00390000003880.b.a ENSGT00940000164972 ENSGT00950000182941.a.a.b #22 ENSGT00950000183163.a.a #23 ENSGT00940000154096.b.b.b.b.a ##25 ENSGT00950000182986.b #26 ENSGT00510000048364 ENSGT00390000004808 #27 ENSGT00940000161202.b ENSGT00390000001737 #29 ENSGT00940000158915 #30 ENSGT00940000159465 #31 ENSGT00940000155107.a.a #32 ENSGT00390000015257 ENSGT00940000156553 #20 ENSGT00390000003012 #19 ENSGT00810000125524 #18 ENSGT00940000158871 #17 Abingdon island giant tortoise MODERN SPECIES 2577 KIAA0319L (ENSCABG00000007240) NCDN (ENSCABG00000007342) TFAP2E (ENSCABG00000007343) PSMB2 (ENSCABG00000007345) C1orf216 (ENSCABG00000007347) CLSPN (ENSCABG00000007352) AGO4 (ENSCABG00000007476) AGO1 (ENSCABG00000013412) ENSCABG00000015096 AGO3 (ENSCABG00000015112) TEKT2 (ENSCABG00000015179) ADPRS (ENSCABG00000015185) COL8A2 (ENSCABG00000015187) TRAPPC3 (ENSCABG00000015191) ENSCABG00000015195 MAP7D1 (ENSCABG00000015201) #22 THRAP3 (ENSCABG00000015214) #23 EVA1B (ENSCABG00000015223) ##25 STK40 (ENSCABG00000015228) #26 LSM10 (ENSCABG00000015234) OSCP1 (ENSCABG00000015236) #27 ENSCABG00000015238 MRPS15 (ENSCABG00000015239) #29 CSF3R (ENSCABG00000015240) #30 Goode s thornscrub tortoise MODERN SPECIES 12 KIAA0319L (ENSGEVG00005006206) NCDN (ENSGEVG00005006175) TFAP2E (ENSGEVG00005006139) PSMB2 (ENSGEVG00005006128) C1orf216 (ENSGEVG00005006043) CLSPN (ENSGEVG00005005870) AGO4 (ENSGEVG00005005791) AGO1 (ENSGEVG00005005703) AGO3 (ENSGEVG00005005639) TEKT2 (ENSGEVG00005005594) ADPRS (ENSGEVG00005005570) ENSGEVG00005005550 ENSGEVG00005005522 TRAPPC3 (ENSGEVG00005005507) ENSGEVG00005005474 MAP7D1 (ENSGEVG00005005319) #22 THRAP3 (ENSGEVG00005005253) #23 ENSGEVG00005005227 EVA1B (ENSGEVG00005005210) ##25 STK40 (ENSGEVG00005005164) #26 LSM10 (ENSGEVG00005005145) OSCP1 (ENSGEVG00005005115) #27 ENSGEVG00005005085 MRPS15 (ENSGEVG00005005058) #29 CSF3R (ENSGEVG00005005019) #30 GRIK3 (ENSGEVG00005004662) #31 ZC3H12A (ENSGEVG00005004569) #32 MEAF6 (ENSGEVG00005004388) SNIP1 (ENSGEVG00005004359) #20 DNALI1 (ENSGEVG00005004338) #19 GNL2 (ENSGEVG00005004309) #18 Lepidosauria ANCESTRAL SPECIES 18 ENSGT01050000245043 ENSGT00940000157613 ENSGT00390000013601 ENSGT00950000182848.c.b.b.a ENSGT00640000091536 ENSGT00390000001867 ENSGT00390000012738 ENSGT00940000158729 ENSGT00940000158568 ENSGT00940000155256 ENSGT00950000182894.D ENSGT00390000015369 ENSGT00940000154317.a.a ENSGT00390000003880.b.a ENSGT00940000164972 ENSGT00950000182941.a.a.b #22 ENSGT00950000183163.a.a #23 ENSGT00940000160627 #24 ENSGT00990000210150 ENSGT00940000154096.b.b.b.b.a ##25 ENSGT00950000182986.b #26 ENSGT00510000048364 ENSGT00390000004808 #27 ENSGT00940000166129 #28 ENSGT00390000001737 #29 ENSGT00940000158915 #30 ENSGT00940000159465 #31 ENSGT00940000155107.a.a #32 ENSGT00390000015257 ENSGT00940000156553 #20 ENSGT00390000003012 #19 tuatara DUPLICATION tuatara MODERN SPECIES 1024 ENSSPUG00000000939 TRAPPC3 (ENSSPUG00000000968) ENSSPUG00000000984 ENSSPUG00000001000 #22 ENSSPUG00000001075 #22 THRAP3 (ENSSPUG00000001120) #23 EVA1B (ENSSPUG00000001155) ##25 STK40 (ENSSPUG00000001174) #26 OSCP1 (ENSSPUG00000001212) #27 ENSSPUG00000001378 MRPS15 (ENSSPUG00000001388) #29 ENSSPUG00000001395 #30 ENSSPUG00000001404 #30 ENSSPUG00000001413 tuatara MODERN SPECIES 1024 ENSSPUG00000000939 TRAPPC3 (ENSSPUG00000000968) ENSSPUG00000000984 ENSSPUG00000001000 #22 ENSSPUG00000001075 #22 THRAP3 (ENSSPUG00000001120) #23 EVA1B (ENSSPUG00000001155) ##25 STK40 (ENSSPUG00000001174) #26 OSCP1 (ENSSPUG00000001212) #27 ENSSPUG00000001378 MRPS15 (ENSSPUG00000001388) #29 ENSSPUG00000001395 #30 ENSSPUG00000001404 #30 ENSSPUG00000001413 Episquamata ANCESTRAL SPECIES 7 ENSGT00390000005318.b.b.b ENSGT00940000157613 ENSGT00390000013601 ENSGT00950000182848.c.b.b.a ENSGT00640000091536 ENSGT00390000001867 ENSGT00390000012738 ENSGT00940000158729 ENSGT00940000158568 ENSGT00940000155256 ENSGT00950000182894.D ENSGT00390000015369 ENSGT00940000154317.a.a ENSGT00390000003880.b.a ENSGT00940000164972 ENSGT00950000182941.a.a.b #22 ENSGT01050000245043 ENSGT00940000159550 ENSGT00940000156221 ENSGT00940000154325.b ENSGT01100000263536.A.b ENSGT00940000159513 ENSGT00390000009435 ENSGT01090000260070.B ##11 ENSGT00980000199132 ENSGT01030000234513.A.a.a.a.a ENSGT01030000234513.A.a.a.a.b.a ENSGT01030000234513.A.a.a.a.b.b ENSGT00390000017672 ENSGT00940000164318 ENSGT00940000166312.b.a Toxicofera ANCESTRAL SPECIES 29 ENSGT00940000164972 ENSGT00950000182941.a.a.b #22 ENSGT00940000159550 ENSGT00940000156221 ENSGT00940000154325.b ENSGT01100000263536.A.b ENSGT00940000159513 ENSGT00390000009435 ENSGT01090000260070.B ##11 ENSGT00980000199132 ENSGT01030000234513.A.a.a.a.a ENSGT01030000234513.A.a.a.a.b.a ENSGT01030000234513.A.a.a.a.b.b ENSGT00390000017672 ENSGT00940000164318 ENSGT00940000166312.b.a ENSGT00940000159768 Elapidae ANCESTRAL SPECIES 9 ENSGT00390000005318.b.b.b ENSGT00940000157613 ENSGT00390000013601 ENSGT00950000182848.c.b.b.a ENSGT00640000091536 ENSGT00390000001867 ENSGT00390000012738 ENSGT00940000158729 ENSGT00940000158568.bb.b ENSGT00940000155256 ENSGT00390000003880.b.a ENSGT00940000154317.a.a ENSGT00390000015369 ENSGT00950000182894.D ENSGT00940000164972 ENSGT00950000182941.a.a.b #22 ENSGT00940000159550 ENSGT00940000154325.b ENSGT01100000263536.A.b ENSGT00940000159513.b ENSGT00940000159513.a ENSGT00390000009435 ENSGT01090000260070.B ##11 ENSGT01030000234513.A.a.a.a.a ENSGT01030000234911 ENSGT01030000234513.A.a.a.a.b.b ENSGT00390000017672 ENSGT00940000164318 ENSGT00940000166312.b.b ENSGT00940000155549.a.b ENSGT00960000189425 Elapidae_a ANCESTRAL SPECIES 15 ENSGT00390000005318.b.b.b ENSGT00940000157613 ENSGT00390000013601 ENSGT00950000182848.c.b.b.a ENSGT00640000091536 ENSGT00390000001867 ENSGT00390000012738 ENSGT00940000158729 ENSGT00940000158568.bb.b ENSGT00940000155256 ENSGT00390000003880.b.a ENSGT00940000154317.a.a ENSGT00390000015369 ENSGT00950000182894.D ENSGT00940000164972 ENSGT00950000182941.a.a.b #22 ENSGT00940000159550 ENSGT00940000154325.b ENSGT01100000263536.A.b ENSGT00940000159513.b ENSGT00940000159513.a ENSGT00390000009435 ENSGT01090000260070.B ##11 ENSGT01030000234513.A.a.a.a.a ENSGT01030000234911 ENSGT01030000234513.A.a.a.a.b.b ENSGT00940000159768 ENSGT00960000189425 ENSGT00940000158387 ENSGT00940000159332 ENSGT00940000155689 Blue-lipped sea krait MODERN SPECIES 7905 MAP7D1 (ENSLLTG00000003599) #22 Acanthophiinae ANCESTRAL SPECIES 22 ENSGT00390000005318.b.b.b ENSGT00940000157613 ENSGT00390000013601 ENSGT00950000182848.c.b.b.a ENSGT00640000091536 ENSGT00390000001867 ENSGT00390000012738 ENSGT00940000158729 ENSGT00940000158568.bb.b ENSGT00940000155256 ENSGT00390000003880.b.a ENSGT00940000154317.a.a ENSGT00390000015369 ENSGT00950000182894.D ENSGT00940000164972 ENSGT00950000182941.a.a.b #22 ENSGT00940000159550 ENSGT00940000154325.b ENSGT01100000263536.A.b ENSGT00940000159513.b ENSGT00940000159513.a ENSGT00390000009435 ENSGT01090000260070.B ##11 ENSGT01030000234513.A.a.a.a.a ENSGT01030000234911 ENSGT01030000234513.A.a.a.a.b.b ENSGT01030000239398 Mainland tiger snake MODERN SPECIES 138 MFSD2A (ENSNSUG00000019799) KIAA0319L (ENSNSUG00000019796) NCDN (ENSNSUG00000019783) TFAP2E (ENSNSUG00000019781) PSMB2 (ENSNSUG00000019780) C1orf216 (ENSNSUG00000019779) CLSPN (ENSNSUG00000019773) AGO4 (ENSNSUG00000019763) AGO1 (ENSNSUG00000019762) AGO3 (ENSNSUG00000019741) TRAPPC3 (ENSNSUG00000019740) ENSNSUG00000019738 ADPRS (ENSNSUG00000019737) TEKT2 (ENSNSUG00000019736) ENSNSUG00000019735 ENSNSUG00000019732 #22 ZMYM4 (ENSNSUG00000019714) ENSNSUG00000019713 TMEM35B (ENSNSUG00000019712) ENSNSUG00000019711 ENSNSUG00000019710 ENSNSUG00000019709 ENSNSUG00000019708 SMIM12 (ENSNSUG00000019707) GJB3 (ENSNSUG00000019705) ENSNSUG00000019704 ENSNSUG00000019703 ENSNSUG00000019702 Indian cobra MODERN SPECIES 11 NCDN (ENSNNAG00000004667) TFAP2E (ENSNNAG00000004641) PSMB2 (ENSNNAG00000004625) C1orf216 (ENSNNAG00000004613) CLSPN (ENSNNAG00000004320) AGO4 (ENSNNAG00000004226) ENSNNAG00000004037 ENSNNAG00000003994 AGO3 (ENSNNAG00000003944) TRAPPC3 (ENSNNAG00000003916) ENSNNAG00000003869 ENSNNAG00000003814 ADPRS (ENSNNAG00000003788) TEKT2 (ENSNNAG00000003765) ENSNNAG00000003741 MAP7D1 (ENSNNAG00000003692) #22 ZMYM4 (ENSNNAG00000018098) ENSNNAG00000018044 TMEM35B (ENSNNAG00000018038) ENSNNAG00000018032 DLGAP3 (ENSNNAG00000018007) SMIM12 (ENSNNAG00000017988) GJA4 (ENSNNAG00000017982) ##11 GJB3 (ENSNNAG00000017979) ENSNNAG00000017976 GJB5 (ENSNNAG00000017972) C1orf94 (ENSNNAG00000017969) ENSNNAG00000017963 CSMD2 (ENSNNAG00000017865) COL9A2 (ENSNNAG00000017827) SMAP2 (ENSNNAG00000017818) Lizard MODERN SPECIES 1169 ENSACAG00000013072 ENSACAG00000013159 #22 ENSACAG00000027692 ENSACAG00000038686 ZMYM4 (ENSACAG00000013198) SFPQ (ENSACAG00000013307) TMEM35B (ENSACAG00000013378) ENSACAG00000013383 ENSACAG00000013385 Laterata ANCESTRAL SPECIES 36 ENSGT00390000005318.b.b.b ENSGT00940000157613 ENSGT00390000013601 ENSGT00950000182848.c.b.b.a ENSGT00640000091536 ENSGT00390000001867 ENSGT00390000012738 ENSGT00940000158729 ENSGT00940000158568 ENSGT00940000155256 ENSGT00950000182894.D ENSGT00390000015369 ENSGT00940000154317.a.a ENSGT00390000003880.b.a ENSGT00940000164972 ENSGT00950000182941.a.a.b #22 ENSGT01050000245043 ENSGT00940000159550 ENSGT00940000156221 ENSGT00940000154325.b ENSGT01100000263536.A.b ENSGT00940000159513 ENSGT00390000009435 ENSGT00980000199132 ENSGT01090000260070.B ##11 ENSGT01030000234513.A.a.a.a.a ENSGT01030000234513.A.a.a.a.b.a ENSGT01030000234513.A.a.a.a.b.b ENSGT00390000017672 ENSGT00940000159768 ENSGT00950000182933.C Common wall lizard MODERN SPECIES 16 ENSPMRG00000009664 NCDN (ENSPMRG00000009848) TFAP2E (ENSPMRG00000009858) PSMB2 (ENSPMRG00000009867) C1orf216 (ENSPMRG00000009878) CLSPN (ENSPMRG00000009895) AGO4 (ENSPMRG00000009986) AGO1 (ENSPMRG00000010343) AGO3 (ENSPMRG00000011185) TEKT2 (ENSPMRG00000011285) ADPRS (ENSPMRG00000011296) COL8A2 (ENSPMRG00000011302) ENSPMRG00000011325 TRAPPC3 (ENSPMRG00000011329) ENSPMRG00000011336 MAP7D1 (ENSPMRG00000011347) #22 ZMYM4 (ENSPMRG00000011364) ENSPMRG00000011405 ENSPMRG00000011406 DLGAP3 (ENSPMRG00000011410) SMIM12 (ENSPMRG00000011417) GJA4 (ENSPMRG00000011419) ##11 GJB3 (ENSPMRG00000011422) GJB4 (ENSPMRG00000011424) ENSPMRG00000011426 ENSPMRG00000011429 ENSPMRG00000011431 C1orf94 (ENSPMRG00000011438) CSMD2 (ENSPMRG00000011468) ENSPMRG00000008198 COL9A2 (ENSPMRG00000008217) Argentine black and white tegu MODERN SPECIES 82 ENSSMRG00000011666 MAP7D1 (ENSSMRG00000011671) #22 ENSSMRG00000011673 ENSSMRG00000011674 ENSSMRG00000011675 ZMYM4 (ENSSMRG00000011677) SFPQ (ENSSMRG00000011683) TMEM35B (ENSSMRG00000011690) ENSSMRG00000011691 DLGAP3 (ENSSMRG00000011699) SMIM12 (ENSSMRG00000011700) ENSSMRG00000011701 GJA4 (ENSSMRG00000011702) ##11 GJB3 (ENSSMRG00000011703) ENSSMRG00000011708 GJB5 (ENSSMRG00000011709) C1orf94 (ENSSMRG00000011719) Mammalia ANCESTRAL SPECIES 19 ENSGT00940000159550 ENSGT00940000155018 ENSGT00940000157613 ENSGT00390000013601 ENSGT00950000182848.c.b.b.a ENSGT00640000091536 ENSGT00390000001867 ENSGT00390000012738 ENSGT00940000158729 ENSGT00940000158568 ENSGT00940000155256 ENSGT00950000182894.D ENSGT00390000015369 ENSGT00940000154317.a.a ENSGT00390000003880.b.a ENSGT00950000182941.a.a.b #22 ENSGT00950000183163.a.a #23 ENSGT00940000160627 #24 ENSGT00940000154096.b.b.b.b.a ##25 ENSGT00950000182986.b #26 ENSGT00510000048364 ENSGT00390000004808 #27 ENSGT00390000001737 #29 ENSGT00940000158915 #30 ENSGT00940000159465 #31 ENSGT00940000155107.a.a #32 ENSGT00390000015257 ENSGT00940000156553 #20 ENSGT00390000003012 #19 ENSGT00810000125524 #18 ENSGT00940000158871 #17 Theria ANCESTRAL SPECIES 36 ENSGT00940000156221 ENSGT00940000159550 ENSGT00940000157613 ENSGT00390000013601 ENSGT00950000182848.c.b.b.a ENSGT00640000091536 ENSGT00390000001867 ENSGT00390000012738 ENSGT00940000158729 ENSGT00940000158568 ENSGT00940000155256 ENSGT00950000182894.D ENSGT00390000015369 ENSGT00940000154317.a.a ENSGT00390000003880.b.a ENSGT00950000182941.a.a.b #22 ENSGT00950000183163.a.a #23 ENSGT00940000160627 #24 ENSGT00940000154096.b.b.b.b.a ##25 ENSGT00950000182986.b #26 ENSGT00510000048364 ENSGT00390000004808 #27 ENSGT00390000001737 #29 ENSGT00940000158915 #30 ENSGT00940000159465 #31 ENSGT00940000155107.a.a #32 ENSGT00390000015257 ENSGT00940000156553 #20 ENSGT00390000003012 #19 ENSGT00810000125524 #18 ENSGT00940000158871 #17 Marsupialia ANCESTRAL SPECIES 10 ENSGT00940000156221 ENSGT00940000159550 ENSGT00940000157613 ENSGT00390000013601 ENSGT00950000182848.c.b.b.a ENSGT00640000091536 ENSGT00390000001867 ENSGT00390000012738 ENSGT00940000158729 ENSGT00940000158568 ENSGT00940000155256 ENSGT00950000182894.D ENSGT00390000015369 ENSGT00940000154317.a.a ENSGT00390000003880.b.a.i ENSGT00950000182941.a.a.b #22 ENSGT00950000183163.a.a #23 ENSGT00940000154096.b.b.b.b.a ##25 ENSGT00950000182986.b #26 ENSGT00510000048364 ENSGT00390000004808 #27 ENSGT00390000001737 #29 ENSGT00940000158915 #30 ENSGT00940000159465 #31 ENSGT00940000155107.a.a #32 ENSGT00390000015257 ENSGT00940000156553 #20 ENSGT00390000003012 #19 ENSGT00810000125524 #18 ENSGT00940000158871 #17 ENSGT00390000008551 Marsupialia_b ANCESTRAL SPECIES 4 ENSGT00940000156221 ENSGT00940000159550 ENSGT00940000157613 ENSGT00390000013601 ENSGT00950000182848.c.b.b.a ENSGT00640000091536 ENSGT00390000001867 ENSGT00390000012738 ENSGT00940000158729 ENSGT00940000158568 ENSGT00940000155256 ENSGT00950000182894.D ENSGT00390000015369 ENSGT00940000154317.a.a ENSGT00390000003880.b.a.i ENSGT00950000182941.a.a.b #22 ENSGT00950000183163.a.a #23 ENSGT00940000154096.b.b.b.b.a ##25 ENSGT00950000182986.b #26 ENSGT00510000048364 ENSGT00390000004808 #27 ENSGT00390000001737 #29 ENSGT00940000158915 #30 ENSGT00940000159465 #31 ENSGT00940000155107.a.a #32 ENSGT00390000015257 ENSGT00940000156553 #20 ENSGT00390000003012 #19 ENSGT00810000125524 #18 ENSGT00940000158871 #17 ENSGT00390000008551 Diprotodontia ANCESTRAL SPECIES 3 ENSGT00940000156221 ENSGT00940000159550 ENSGT00940000157613 ENSGT00390000013601 ENSGT00950000182848.c.b.b.a ENSGT00640000091536 ENSGT00390000001867 ENSGT00390000012738 ENSGT00940000158729 ENSGT00940000158568 ENSGT00940000155256 ENSGT00950000182894.D ENSGT00390000015369 ENSGT00940000154317.a.a ENSGT00390000003880.b.a.i ENSGT00950000182941.a.a.b #22 ENSGT00950000183163.a.a #23 ENSGT00940000154096.b.b.b.b.a ##25 ENSGT00950000182986.b #26 ENSGT00510000048364 ENSGT00390000004808 #27 ENSGT00390000001737 #29 ENSGT00940000158915 #30 ENSGT00940000159465 #31 ENSGT00940000155107.a.a #32 ENSGT00390000015257 ENSGT00940000156553 #20 ENSGT00390000003012 #19 ENSGT00810000125524 #18 ENSGT00940000158871 #17 ENSGT00390000008551 Diprotodontia_a ANCESTRAL SPECIES 4 ENSGT00940000156221 ENSGT00940000159550 ENSGT00940000157613 ENSGT00390000013601 ENSGT00950000182848.c.b.b.a ENSGT00640000091536.a ENSGT00390000001867 ENSGT00390000012738 ENSGT00940000158729 ENSGT00940000158568 ENSGT00940000155256 ENSGT00950000182894.D ENSGT00390000015369 ENSGT00940000154317.a.a ENSGT00390000003880.b.a.i ENSGT00950000182941.a.a.b #22 ENSGT00950000183163.a.a #23 ENSGT00940000154096.b.b.b.b.a ##25 ENSGT00950000182986.b #26 ENSGT00510000048364 ENSGT00390000004808 #27 ENSGT00390000001737 #29 ENSGT00940000158915 #30 ENSGT00940000159465 #31 ENSGT00940000155107.a.a #32 ENSGT00390000015257 ENSGT00940000156553 #20 ENSGT00390000003012 #19 ENSGT00810000125524 #18 ENSGT00940000158871 #17 ENSGT00390000008551 koala MODERN SPECIES 14 ZMYM4 (ENSPCIG00000000748) ENSPCIG00000005735 KIAA0319L (ENSPCIG00000000705) NCDN (ENSPCIG00000000687) TFAP2E (ENSPCIG00000000674) PSMB2 (ENSPCIG00000000656) ENSPCIG00000000636 CLSPN (ENSPCIG00000000623) AGO4 (ENSPCIG00000000092) AGO1 (ENSPCIG00000000172) AGO3 (ENSPCIG00000000198) TEKT2 (ENSPCIG00000000226) ADPRS (ENSPCIG00000000248) COL8A2 (ENSPCIG00000000274) TRAPPC3 (ENSPCIG00000000307) MAP7D1 (ENSPCIG00000024807) #22 THRAP3 (ENSPCIG00000024805) #23 EVA1B (ENSPCIG00000014860) ##25 STK40 (ENSPCIG00000014864) #26 LSM10 (ENSPCIG00000014865) OSCP1 (ENSPCIG00000014866) #27 ENSPCIG00000014874 #30 GRIK3 (ENSPCIG00000014898) #31 ZC3H12A (ENSPCIG00000035700) #32 ENSPCIG00000036821 SNIP1 (ENSPCIG00000000204) #20 DNALI1 (ENSPCIG00000000162) #19 GNL2 (ENSPCIG00000000135) #18 RSPO1 (ENSPCIG00000025743) #17 C1orf109 (ENSPCIG00000025741) CDCA8 (ENSPCIG00000025739) Common wonbat MODERN SPECIES 1014 DLGAP3 (ENSVURG00010004031) ENSVURG00010004017 SFPQ (ENSVURG00010003967) ZMYM4 (ENSVURG00010003887) KIAA0319L (ENSVURG00010003844) NCDN (ENSVURG00010003829) TFAP2E (ENSVURG00010003800) ENSVURG00010003776 C1orf216 (ENSVURG00010003767) CLSPN (ENSVURG00010003394) AGO1 (ENSVURG00010003341) AGO4 (ENSVURG00010003234) TEKT2 (ENSVURG00010003190) ADPRS (ENSVURG00010003186) COL8A2 (ENSVURG00010003181) MAP7D1 (ENSVURG00010003157) #22 THRAP3 (ENSVURG00010003132) #23 ENSVURG00010003118 ##25 STK40 (ENSVURG00010003108) #26 LSM10 (ENSVURG00010003089) OSCP1 (ENSVURG00010003056) #27 MRPS15 (ENSVURG00010003030) #29 CSF3R (ENSVURG00010003017) #30 ENSVURG00010002992 GRIK3 (ENSVURG00010002934) #31 ZC3H12A (ENSVURG00010002872) #32 MEAF6 (ENSVURG00010002849) SNIP1 (ENSVURG00010002829) #20 DNALI1 (ENSVURG00010002806) #19 GNL2 (ENSVURG00010002781) #18 RSPO1 (ENSVURG00010002763) #17 Wallaby MODERN SPECIES 2583 MAP7D1 (ENSMEUG00000016239) #22 Tasmanian devil MODERN SPECIES 2 ENSSHAG00000016107 ZMYM4 (ENSSHAG00000016398) KIAA0319L (ENSSHAG00000016681) NCDN (ENSSHAG00000016854) TFAP2E (ENSSHAG00000016887) PSMB2 (ENSSHAG00000021782) ENSSHAG00000030808 CLSPN (ENSSHAG00000017175) ENSSHAG00000017320 AGO1 (ENSSHAG00000017468) AGO3 (ENSSHAG00000029487) TEKT2 (ENSSHAG00000005473) ADPRS (ENSSHAG00000029452) COL8A2 (ENSSHAG00000017647) ENSSHAG00000023429 MAP7D1 (ENSSHAG00000017810) #22 THRAP3 (ENSSHAG00000017932) #23 EVA1B (ENSSHAG00000017973) ##25 STK40 (ENSSHAG00000017985) #26 OSCP1 (ENSSHAG00000021302) #27 LSM10 (ENSSHAG00000022746) MRPS15 (ENSSHAG00000018120) #29 ENSSHAG00000018138 #30 GRIK3 (ENSSHAG00000025082) #31 ZC3H12A (ENSSHAG00000021632) #32 MEAF6 (ENSSHAG00000011910) ENSSHAG00000012118 #20 DNALI1 (ENSSHAG00000012158) #19 GNL2 (ENSSHAG00000012267) #18 RSPO1 (ENSSHAG00000012546) #17 C1orf109 (ENSSHAG00000013153) Opossum MODERN SPECIES 3 ENSMODG00000029270 ENSMODG00000047620 KIAA0319L (ENSMODG00000017916) NCDN (ENSMODG00000017906) TFAP2E (ENSMODG00000017904) ENSMODG00000017902 ENSMODG00000017899 CLSPN (ENSMODG00000017895) AGO4 (ENSMODG00000017888) AGO1 (ENSMODG00000023335) AGO3 (ENSMODG00000017869) TEKT2 (ENSMODG00000017883) ADPRS (ENSMODG00000017880) COL8A2 (ENSMODG00000047645) TRAPPC3 (ENSMODG00000017848) ENSMODG00000048565 #22 ENSMODG00000017834 #23 ENSMODG00000050671 #23 EVA1B (ENSMODG00000017827) ##25 STK40 (ENSMODG00000017824) #26 LSM10 (ENSMODG00000023328) OSCP1 (ENSMODG00000017817) #27 MRPS15 (ENSMODG00000017813) #29 CSF3R (ENSMODG00000017810) #30 GRIK3 (ENSMODG00000017802) #31 ZC3H12A (ENSMODG00000017794) #32 ENSMODG00000017787 SNIP1 (ENSMODG00000017778) #20 DNALI1 (ENSMODG00000047771) #19 GNL2 (ENSMODG00000017773) #18 RSPO1 (ENSMODG00000023326) #17 Eutheria ANCESTRAL SPECIES ENSGT00940000156221 ENSGT00940000159550 ENSGT00940000157613 ENSGT00390000013601 ENSGT00950000182848.c.b.b.a ENSGT00640000091536 ENSGT00390000001867 ENSGT00390000012738 ENSGT00940000158729 ENSGT00940000158568 ENSGT00940000155256 ENSGT00950000182894.D ENSGT00390000015369 ENSGT00940000154317.a.a ENSGT00390000003880.b.a ENSGT00950000182941.a.a.b #22 ENSGT00950000183163.a.a #23 ENSGT00940000160627 #24 ENSGT00940000154096.b.b.b.b.a ##25 ENSGT00950000182986.b #26 ENSGT00510000048364 ENSGT00390000004808 #27 ENSGT00390000001737 #29 ENSGT00940000158915 #30 ENSGT00940000159465 #31 ENSGT00940000155107.a.a #32 ENSGT00390000015257 ENSGT00940000156553 #20 ENSGT00390000003012 #19 ENSGT00810000125524 #18 ENSGT00940000158871 #17 Atlantogenata ANCESTRAL SPECIES 4 ENSGT00940000156221 ENSGT00940000159550 ENSGT00940000157613 ENSGT00390000013601 ENSGT00950000182848.c.b.b.a ENSGT00640000091536 ENSGT00390000001867 ENSGT00390000012738 ENSGT00940000158729 ENSGT00940000158568 ENSGT00940000155256 ENSGT00950000182894.D ENSGT00390000015369 ENSGT00940000154317.a.a ENSGT00390000003880.b.a ENSGT00950000182941.a.a.b #22 ENSGT00950000183163.a.a #23 ENSGT00940000160627 #24 ENSGT00940000154096.b.b.b.b.a ##25 ENSGT00950000182986.b #26 ENSGT00510000048364 ENSGT00390000004808 #27 ENSGT00390000001737 #29 ENSGT00940000158915 #30 ENSGT00940000159465 #31 ENSGT00940000155107.a.a #32 ENSGT00390000015257 ENSGT00940000156553 #20 ENSGT00390000003012 #19 ENSGT00810000125524 #18 ENSGT00940000158871 #17 Afrotheria ANCESTRAL SPECIES 15 ENSGT00940000156221 ENSGT00940000159550 ENSGT00940000157613 ENSGT00390000013601 ENSGT00950000182848.c.b.b.a ENSGT00640000091536 ENSGT00390000001867 ENSGT00390000012738 ENSGT00940000158729 ENSGT00940000158568 ENSGT00940000155256 ENSGT00950000182894.D ENSGT00390000015369 ENSGT00940000154317.a.a ENSGT00390000003880.b.a ENSGT00950000182941.a.a.b #22 ENSGT00950000183163.a.a #23 ENSGT00940000160627 #24 ENSGT00940000154096.b.b.b.b.a ##25 ENSGT00950000182986.b #26 ENSGT00510000048364 ENSGT00390000004808 #27 ENSGT00390000001737 #29 ENSGT00940000158915 #30 ENSGT00940000159465 #31 ENSGT00940000155107.a.a #32 ENSGT00390000015257 ENSGT00940000156553 #20 ENSGT00390000003012 #19 ENSGT00810000125524 #18 ENSGT00940000158871 #17 Afrotheria_a ANCESTRAL SPECIES 15 ENSGT00940000157337 ENSGT00940000156221 ENSGT00940000159550 ENSGT00940000157613 ENSGT00390000013601 ENSGT00950000182848.c.b.b.a ENSGT00640000091536 ENSGT00390000001867 ENSGT00390000012738 ENSGT00940000158729 ENSGT00940000158568 ENSGT00940000155256 ENSGT00950000182894.D ENSGT00390000015369 ENSGT00390000003880.b.a ENSGT00950000182941.a.a.b #22 ENSGT00950000183163.a.a #23 ENSGT00940000160627 #24 ENSGT00940000154096.b.b.b.b.a ##25 ENSGT00950000182986.b #26 ENSGT00510000048364 ENSGT00390000004808 #27 ENSGT00390000001737 #29 ENSGT00940000158915 #30 ENSGT00940000159465 #31 ENSGT00940000155107.a.a #32 ENSGT00390000015257 ENSGT00940000156553 #20 ENSGT00390000003012 #19 ENSGT00810000125524 #18 ENSGT00940000158871 #17 Elephant MODERN SPECIES 332 SFPQ (ENSLAFG00000015951) ZMYM4 (ENSLAFG00000007332) KIAA0319L (ENSLAFG00000007339) NCDN (ENSLAFG00000007345) TFAP2E (ENSLAFG00000029444) PSMB2 (ENSLAFG00000007353) C1orf216 (ENSLAFG00000027891) CLSPN (ENSLAFG00000007905) AGO4 (ENSLAFG00000010394) AGO1 (ENSLAFG00000010835) AGO3 (ENSLAFG00000002744) TEKT2 (ENSLAFG00000017273) ADPRS (ENSLAFG00000017280) ENSLAFG00000030120 TRAPPC3 (ENSLAFG00000009853) MAP7D1 (ENSLAFG00000009850) #22 THRAP3 (ENSLAFG00000009587) #23 ENSLAFG00000028055 #24 ENSLAFG00000000070 #24 EVA1B (ENSLAFG00000008194) ##25 STK40 (ENSLAFG00000009594) #26 LSM10 (ENSLAFG00000009600) OSCP1 (ENSLAFG00000021988) #27 MRPS15 (ENSLAFG00000011450) #29 CSF3R (ENSLAFG00000014447) #30 GRIK3 (ENSLAFG00000015216) #31 ENSLAFG00000030279 RSPO1 (ENSLAFG00000006813) #17 ZC3H12A (ENSLAFG00000018720) #32 MEAF6 (ENSLAFG00000018721) SNIP1 (ENSLAFG00000030689) #20 Hyrax MODERN SPECIES 3122 TRAPPC3 (ENSPCAG00000002504) MAP7D1 (ENSPCAG00000002540) #22 Tenrec MODERN SPECIES 1754 MAP7D1 (ENSETEG00000012550) #22 Xenarthra ANCESTRAL SPECIES 36 ENSGT00940000156221 ENSGT00940000159550 ENSGT00940000157613 ENSGT00390000013601 ENSGT00950000182848.c.b.b.a ENSGT00640000091536 ENSGT00390000001867 ENSGT00390000012738 ENSGT00940000158729 ENSGT00940000158568 ENSGT00940000155256 ENSGT00950000182894.D ENSGT00390000015369 ENSGT00940000154317.a.a ENSGT00390000003880.b.a ENSGT00950000182941.a.a.b #22 ENSGT00950000183163.a.a #23 ENSGT00940000160627 #24 ENSGT00940000154096.b.b.b.b.a ##25 ENSGT00950000182986.b #26 ENSGT00510000048364 ENSGT00390000004808 #27 ENSGT00390000001737 #29 ENSGT00940000158915 #30 ENSGT00940000159465 #31 ENSGT00940000155107.a.a #32 ENSGT00390000015257 ENSGT00940000156553 #20 ENSGT00390000003012 #19 ENSGT00810000125524 #18 ENSGT00940000158871 #17 Armadillo MODERN SPECIES 2908 ENSDNOG00000032775 ZMYM4 (ENSDNOG00000017647) KIAA0319L (ENSDNOG00000017653) NCDN (ENSDNOG00000017658) TFAP2E (ENSDNOG00000036871) PSMB2 (ENSDNOG00000017663) C1orf216 (ENSDNOG00000017576) CLSPN (ENSDNOG00000015628) AGO4 (ENSDNOG00000015674) AGO1 (ENSDNOG00000008077) AGO3 (ENSDNOG00000008106) TEKT2 (ENSDNOG00000040733) ADPRS (ENSDNOG00000025495) COL8A2 (ENSDNOG00000043920) TRAPPC3 (ENSDNOG00000039424) MAP7D1 (ENSDNOG00000005516) #22 THRAP3 (ENSDNOG00000031470) #23 SH3D21 (ENSDNOG00000023808) #24 EVA1B (ENSDNOG00000010513) ##25 ENSDNOG00000023624 STK40 (ENSDNOG00000041875) #26 LSM10 (ENSDNOG00000036662) OSCP1 (ENSDNOG00000040997) #27 MRPS15 (ENSDNOG00000046736) #29 CSF3R (ENSDNOG00000018916) #30 GRIK3 (ENSDNOG00000008042) #31 ZC3H12A (ENSDNOG00000035006) #32 MEAF6 (ENSDNOG00000038956) ENSDNOG00000014381 #20 DNALI1 (ENSDNOG00000031070) #19 ENSDNOG00000016466 #18 Boreoeutheria ANCESTRAL SPECIES ENSGT00940000157613 ENSGT00940000168628 ENSGT00390000013601 ENSGT00950000182848.c.b.b.a ENSGT00640000091536 ENSGT00390000001867 ENSGT00390000012738 ENSGT00940000158729 ENSGT00940000158568 ENSGT00940000155256 ENSGT00390000012030.a ENSGT00950000182894.D ENSGT00390000015369 ENSGT00940000154317.a.a ENSGT00390000003880.b.a ENSGT00950000182941.a.a.b #22 ENSGT00950000183163.a.a #23 ENSGT00940000160627 #24 ENSGT00940000154096.b.b.b.b.a ##25 ENSGT00950000182986.b #26 ENSGT00510000048364 ENSGT00390000004808 #27 ENSGT00390000001737 #29 ENSGT00940000158915 #30 ENSGT00940000159465 #31 ENSGT00940000155107.a.a #32 ENSGT00390000015257 ENSGT00940000156553 #20 ENSGT00390000003012 #19 ENSGT00810000125524 #18 ENSGT00940000158871 #17 Laurasiatheria ANCESTRAL SPECIES ENSGT00940000157613 ENSGT00940000168628 ENSGT00390000013601 ENSGT00950000182848.c.b.b.a ENSGT00640000091536 ENSGT00390000001867 ENSGT00390000012738 ENSGT00940000158729 ENSGT00940000158568 ENSGT00940000155256 ENSGT00390000012030.a ENSGT00950000182894.D ENSGT00390000015369 ENSGT00940000154317.a.a ENSGT00390000003880.b.a ENSGT00950000182941.a.a.b #22 ENSGT00950000183163.a.a #23 ENSGT00940000160627 #24 ENSGT00940000168963 ENSGT00990000210150 ENSGT00940000154096.b.b.b.b.a ##25 ENSGT00950000182986.b #26 ENSGT00510000048364 ENSGT00390000004808 #27 ENSGT00390000001737 #29 ENSGT00940000158915 #30 ENSGT00940000159465 #31 ENSGT00940000155107.a.a #32 ENSGT00390000015257 ENSGT00940000156553 #20 ENSGT00390000003012 #19 Laurasiatheria_a ANCESTRAL SPECIES ENSGT00940000157613 ENSGT00940000168628 ENSGT00390000013601 ENSGT00950000182848.c.b.b.a ENSGT00640000091536 ENSGT00390000001867 ENSGT00390000012738 ENSGT00940000158729 ENSGT00940000158568 ENSGT00940000155256 ENSGT00390000012030.a ENSGT00950000182894.D ENSGT00390000015369 ENSGT00940000154317.a.a ENSGT00390000003880.b.a ENSGT00950000182941.a.a.b #22 ENSGT00950000183163.a.a #23 ENSGT00940000160627 #24 ENSGT00940000154096.b.b.b.b.a ##25 ENSGT00950000182986.b #26 ENSGT00510000048364 ENSGT00390000004808 #27 ENSGT00390000001737 #29 ENSGT00940000158915 #30 ENSGT00940000159465 #31 ENSGT00940000155107.a.a #32 ENSGT00390000015257 ENSGT00940000156553 #20 ENSGT00390000003012 #19 ENSGT00810000125524 #18 ENSGT00940000158871 #17 Laurasiatheria_b ANCESTRAL SPECIES ENSGT00940000159550 ENSGT00940000157613 ENSGT00940000168628 ENSGT00390000013601 ENSGT00950000182848.c.b.b.a ENSGT00640000091536 ENSGT00390000001867 ENSGT00390000012738 ENSGT00940000158729 ENSGT00940000158568 ENSGT00940000155256 ENSGT00950000182894.D ENSGT00390000015369 ENSGT00940000154317.a.a ENSGT00390000003880.b.a ENSGT00950000182941.a.a.b #22 ENSGT00950000183163.a.a #23 ENSGT00940000160627 #24 ENSGT00940000154096.b.b.b.b.a ##25 ENSGT00950000182986.b #26 ENSGT00510000048364 ENSGT00390000004808 #27 ENSGT00390000001737 #29 ENSGT00940000158915 #30 ENSGT00940000159465 #31 ENSGT00940000155107.a.a #32 ENSGT00390000015257 ENSGT00940000156553 #20 ENSGT00390000003012 #19 ENSGT00810000125524 #18 ENSGT00940000158871 #17 Carnivora ANCESTRAL SPECIES 1 ENSGT00940000159550 ENSGT00940000157613 ENSGT00940000168628 ENSGT00390000013601 ENSGT00950000182848.c.b.b.a ENSGT00640000091536 ENSGT00390000001867 ENSGT00390000012738 ENSGT00940000158729 ENSGT00940000158568 ENSGT00940000155256 ENSGT00950000182894.D ENSGT00390000015369 ENSGT00940000154317.a.a ENSGT00390000003880.b.a ENSGT00950000182941.a.a.b #22 ENSGT00950000183163.a.a #23 ENSGT00940000160627 #24 ENSGT00940000154096.b.b.b.b.a ##25 ENSGT00950000182986.b #26 ENSGT00510000048364 ENSGT00390000004808 #27 ENSGT00390000001737 #29 ENSGT00940000158915 #30 ENSGT00940000159465 #31 ENSGT00940000155107.a.a #32 ENSGT00390000015257 ENSGT00940000156553 #20 ENSGT00390000003012 #19 ENSGT00810000125524 #18 ENSGT00940000158871 #17 Caniformia ANCESTRAL SPECIES 2 ENSGT00940000159550 ENSGT00940000157613 ENSGT00940000168628 ENSGT00390000013601 ENSGT00950000182848.c.b.b.a ENSGT00640000091536 ENSGT00390000001867 ENSGT00390000012738 ENSGT00940000158729 ENSGT00940000158568 ENSGT00940000155256 ENSGT00950000182894.D ENSGT00390000015369 ENSGT00940000154317.a.a ENSGT00390000003880.b.a ENSGT00950000182941.a.a.b #22 ENSGT00950000183163.a.a #23 ENSGT00940000160627 #24 ENSGT00940000154096.b.b.b.b.a ##25 ENSGT00950000182986.b #26 ENSGT00510000048364 ENSGT00390000004808 #27 ENSGT00390000001737 #29 ENSGT00940000158915 #30 ENSGT00940000159465 #31 ENSGT00940000155107.a.a #32 ENSGT00390000015257 ENSGT00940000156553 #20 ENSGT00390000003012 #19 ENSGT00810000125524 #18 ENSGT00940000158871 #17 Canidae ANCESTRAL SPECIES 12 ENSGT00940000156221.a ENSGT00940000159550 ENSGT00940000157613 ENSGT00390000013601 ENSGT00950000182848.c.b.b.a ENSGT00640000091536 ENSGT00390000001867 ENSGT00390000012738 ENSGT00940000158729 ENSGT00940000158568 ENSGT00940000155256 ENSGT00950000182894.D ENSGT00390000015369 ENSGT00940000154317.a.a ENSGT00390000003880.b.a ENSGT00950000182941.a.a.b #22 ENSGT00950000183163.a.a #23 ENSGT00940000160627 #24 ENSGT00940000154096.b.b.b.b.a ##25 ENSGT00950000182986.b #26 ENSGT00510000048364 ENSGT00390000004808 #27 ENSGT00390000001737 #29 ENSGT00940000158915 #30 ENSGT00940000159465 #31 ENSGT00940000155107.a.a #32 ENSGT00390000015257 ENSGT00940000156553 #20 ENSGT00390000003012 #19 ENSGT00810000125524 #18 ENSGT00940000158871 #17 Canis_lupus ANCESTRAL SPECIES 16 ENSGT00940000157337 ENSGT00940000156221.a ENSGT00940000159550 ENSGT00940000157613 ENSGT00390000013601 ENSGT00950000182848.c.b.b.a ENSGT00640000091536 ENSGT00390000001867 ENSGT00390000012738.k ENSGT00940000158568 ENSGT00940000155256 ENSGT00950000182894.D ENSGT00390000015369 ENSGT00940000154317.a.a ENSGT00390000003880.b.a ENSGT00950000182941.a.a.b #22 ENSGT00950000183163.a.a #23 ENSGT00940000160627 #24 ENSGT00940000154096.b.b.b.b.a ##25 ENSGT00950000182986.b #26 ENSGT00510000048364 ENSGT00390000004808 #27 ENSGT00390000001737 #29 ENSGT00940000158915 #30 ENSGT00940000159465 #31 ENSGT00940000155107.a.a #32 ENSGT00390000015257 ENSGT00940000156553 #20 ENSGT00390000003012 #19 ENSGT00810000125524 #18 ENSGT00940000158871 #17 Dog MODERN SPECIES 6 ZMYM4 (ENSCAFG00845014825) KIAA0319L (ENSCAFG00845014738) NCDN (ENSCAFG00845014699) TFAP2E (ENSCAFG00845014665) PSMB2 (ENSCAFG00845014631) C15H1orf216 (ENSCAFG00845014608) CLSPN (ENSCAFG00845014565) AGO1 (ENSCAFG00845030992) AGO3 (ENSCAFG00845030956) ADPRHL2 (ENSCAFG00845030916) COL8A2 (ENSCAFG00845030898) TRAPPC3 (ENSCAFG00845030892) THRAP3 (ENSCAFG00845030875) #23 ENSCAFG00845030851 ##25 ENSCAFG00845030827 #24 ENSCAFG00845030799 #22 STK40 (ENSCAFG00845030786) #26 LSM10 (ENSCAFG00845030776) OSCP1 (ENSCAFG00845030771) #27 ENSCAFG00845030768 #29 CSF3R (ENSCAFG00845030757) #30 GRIK3 (ENSCAFG00845030735) #31 ZC3H12A (ENSCAFG00845030728) #32 MEAF6 (ENSCAFG00845030711) SNIP1 (ENSCAFG00845030697) #20 DNALI1 (ENSCAFG00845030680) #19 GNL2 (ENSCAFG00845030665) #18 RSPO1 (ENSCAFG00845030653) #17 C15H1orf109 (ENSCAFG00845030642) CDCA8 (ENSCAFG00845030636) EPHA10 (ENSCAFG00845030611) Dingo MODERN SPECIES 344 ZMYM6 (ENSCAFG00020010705) ENSCAFG00020010702 ZMYM4 (ENSCAFG00020009999) KIAA0319L (ENSCAFG00020009949) NCDN (ENSCAFG00020009945) TFAP2E (ENSCAFG00020009931) PSMB2 (ENSCAFG00020009927) ENSCAFG00020009913 ENSCAFG00020009910 AGO1 (ENSCAFG00020009251) AGO3 (ENSCAFG00020009051) TEKT2 (ENSCAFG00020009035) ADPRS (ENSCAFG00020009028) COL8A2 (ENSCAFG00020009026) TRAPPC3 (ENSCAFG00020009022) MAP7D1 (ENSCAFG00020009006) #22 THRAP3 (ENSCAFG00020008982) #23 ENSCAFG00020008975 ##25 SH3D21 (ENSCAFG00020008955) #24 STK40 (ENSCAFG00020008930) #26 LSM10 (ENSCAFG00020008920) OSCP1 (ENSCAFG00020008914) #27 MRPS15 (ENSCAFG00020008912) #29 CSF3R (ENSCAFG00020008854) #30 ENSCAFG00020008853 GRIK3 (ENSCAFG00020008653) #31 ZC3H12A (ENSCAFG00020008620) #32 MEAF6 (ENSCAFG00020008613) ENSCAFG00020008608 SNIP1 (ENSCAFG00020008599) #20 DNALI1 (ENSCAFG00020008587) #19 Red fox MODERN SPECIES 9 ZMYM4 (ENSVVUG00000000796) KIAA0319L (ENSVVUG00000000742) NCDN (ENSVVUG00000000730) PSMB2 (ENSVVUG00000000594) CUNH1orf216 (ENSVVUG00000000576) ENSVVUG00000000567 ENSVVUG00000000502 ENSVVUG00000000479 ENSVVUG00000000465 AGO1 (ENSVVUG00000000405) AGO3 (ENSVVUG00000000362) ENSVVUG00000000300 ADPRS (ENSVVUG00000000243) COL8A2 (ENSVVUG00000000223) TRAPPC3 (ENSVVUG00000000193) MAP7D1 (ENSVVUG00000000164) #22 THRAP3 (ENSVVUG00000000118) #23 SH3D21 (ENSVVUG00000023237) #24 ENSVVUG00000023229 STK40 (ENSVVUG00000023215) #26 LSM10 (ENSVVUG00000023209) OSCP1 (ENSVVUG00000023202) #27 MRPS15 (ENSVVUG00000023194) #29 CSF3R (ENSVVUG00000023189) #30 GRIK3 (ENSVVUG00000023178) #31 ZC3H12A (ENSVVUG00000023171) #32 MEAF6 (ENSVVUG00000023163) SNIP1 (ENSVVUG00000023160) #20 DNALI1 (ENSVVUG00000023159) #19 GNL2 (ENSVVUG00000023157) #18 RSPO1 (ENSVVUG00000023149) #17 Caniformia_b ANCESTRAL SPECIES 1 ENSGT00940000159550 ENSGT00940000157613 ENSGT00940000168628 ENSGT00390000013601 ENSGT00950000182848.c.b.b.a ENSGT00640000091536 ENSGT00390000001867 ENSGT00390000012738 ENSGT00940000158729 ENSGT00940000158568 ENSGT00940000155256 ENSGT00950000182894.D ENSGT00390000015369 ENSGT00940000154317.a.a ENSGT00390000003880.b.a ENSGT00950000182941.a.a.b #22 ENSGT00950000183163.a.a #23 ENSGT00940000160627 #24 ENSGT00940000154096.b.b.b.b.a ##25 ENSGT00950000182986.b #26 ENSGT00510000048364 ENSGT00390000004808 #27 ENSGT00390000001737 #29 ENSGT00940000158915 #30 ENSGT00940000159465 #31 ENSGT00940000155107.a.a #32 ENSGT00390000015257 ENSGT00940000156553 #20 ENSGT00390000003012 #19 ENSGT00810000125524 #18 ENSGT00940000158871 #17 Mustelinae ANCESTRAL SPECIES ENSGT00940000156221 ENSGT00940000159550 ENSGT00940000157613 ENSGT00390000013601 ENSGT00950000182848.c.b.b.a ENSGT00640000091536 ENSGT00390000001867 ENSGT00390000012738 ENSGT00940000158729 ENSGT00940000158568 ENSGT00940000155256 ENSGT00950000182894.D ENSGT00390000015369 ENSGT00940000154317.a.a ENSGT00390000003880.b.a ENSGT00950000182941.a.a.b #22 ENSGT00950000183163.a.a #23 ENSGT00940000160627 #24 ENSGT00940000154096.b.b.b.b.a ##25 ENSGT00950000182986.b #26 ENSGT00510000048364 ENSGT00390000004808 #27 ENSGT00390000001737 #29 ENSGT00940000158915 #30 ENSGT00940000159465 #31 ENSGT00940000155107.a.a #32 ENSGT00390000015257 ENSGT00940000156553 #20 ENSGT00390000003012 #19 ENSGT00810000125524 #18 ENSGT00940000158871 #17 American mink MODERN SPECIES 99 ZMYM1 (ENSNVIG00000011646) SFPQ (ENSNVIG00000011654) ZMYM4 (ENSNVIG00000011677) KIAA0319L (ENSNVIG00000011748) NCDN (ENSNVIG00000011790) TFAP2E (ENSNVIG00000011827) PSMB2 (ENSNVIG00000011855) CA216 (ENSNVIG00000011868) CLSPN (ENSNVIG00000011881) AGO1 (ENSNVIG00000012004) ENSNVIG00000012133 TEKT2 (ENSNVIG00000012158) ADPRS (ENSNVIG00000012218) COL8A2 (ENSNVIG00000012227) TPPC3 (ENSNVIG00000012239) MAP7D1 (ENSNVIG00000012295) #22 THRAP3 (ENSNVIG00000012429) #23 ENSNVIG00000012530 #24 EVA1B (ENSNVIG00000012547) ##25 STK40 (ENSNVIG00000012562) #26 LSM10 (ENSNVIG00000012589) OSCP1 (ENSNVIG00000012600) #27 ENSNVIG00000012683 #29 CSF3R (ENSNVIG00000012698) #30 GRIK3 (ENSNVIG00000012775) #31 ZC3H12A (ENSNVIG00000012804) #32 MEAF6 (ENSNVIG00000012809) SNIP1 (ENSNVIG00000012822) #20 DNALI1 (ENSNVIG00000012831) #19 GNL2 (ENSNVIG00000012836) #18 RSPO1 (ENSNVIG00000012862) #17 Ferret MODERN SPECIES 167 ZMYM4 (ENSMPUG00000014924) KIAA0319L (ENSMPUG00000014917) NCDN (ENSMPUG00000014913) TFAP2E (ENSMPUG00000014894) PSMB2 (ENSMPUG00000014891) C1orf216 (ENSMPUG00000018596) CLSPN (ENSMPUG00000014881) AGO4 (ENSMPUG00000014876) AGO1 (ENSMPUG00000014872) ENSMPUG00000014871 TEKT2 (ENSMPUG00000014823) ADPRS (ENSMPUG00000014821) COL8A2 (ENSMPUG00000014818) TRAPPC3 (ENSMPUG00000014815) ENSMPUG00000018594 MAP7D1 (ENSMPUG00000014812) #22 THRAP3 (ENSMPUG00000014809) #23 ENSMPUG00000014783 #24 EVA1B (ENSMPUG00000014781) ##25 STK40 (ENSMPUG00000014777) #26 LSM10 (ENSMPUG00000018593) OSCP1 (ENSMPUG00000014774) #27 CSF3R (ENSMPUG00000014768) #30 GRIK3 (ENSMPUG00000014760) #31 ZC3H12A (ENSMPUG00000014758) #32 MEAF6 (ENSMPUG00000014722) SNIP1 (ENSMPUG00000014718) #20 DNALI1 (ENSMPUG00000014714) #19 GNL2 (ENSMPUG00000014709) #18 RSPO1 (ENSMPUG00000014706) #17 C1orf109 (ENSMPUG00000014702) Ursidae ANCESTRAL SPECIES ENSGT00940000159550 ENSGT00940000157613 ENSGT00940000168628 ENSGT00390000013601 ENSGT00950000182848.c.b.b.a ENSGT00640000091536.f ENSGT00390000001867 ENSGT00390000012738 ENSGT00940000158729 ENSGT00940000158568 ENSGT00940000155256 ENSGT00950000182894.D ENSGT00390000015369 ENSGT00940000154317.a.a ENSGT00390000003880.b.a ENSGT00950000182941.a.a.b #22 ENSGT00950000183163.a.a #23 ENSGT00940000160627 #24 ENSGT00940000154096.b.b.b.b.a ##25 ENSGT00950000182986.b #26 ENSGT00510000048364 ENSGT00390000004808 #27 ENSGT00390000001737 #29 ENSGT00940000158915 #30 ENSGT00940000159465 #31 ENSGT00940000155107.a.a #32 ENSGT00390000015257 ENSGT00940000156553 #20 ENSGT00390000003012 #19 ENSGT00810000125524 #18 ENSGT00940000158871 #17 Ursus ANCESTRAL SPECIES ENSGT00940000159550 ENSGT00940000157613 ENSGT00940000168628 ENSGT00390000013601 ENSGT00950000182848.c.b.b.a ENSGT00640000091536.f ENSGT00390000001867 ENSGT00390000012738 ENSGT00940000158729 ENSGT00940000158568 ENSGT00940000155256 ENSGT00950000182894.D ENSGT00390000015369 ENSGT00940000154317.a.a ENSGT00390000003880.b.a ENSGT00950000182941.a.a.b #22 ENSGT00950000183163.a.a #23 ENSGT00940000160627 #24 ENSGT00940000154096.b.b.b.b.a ##25 ENSGT00950000182986.b #26 ENSGT00510000048364 ENSGT00390000004808.a #27 ENSGT00390000001737 #29 ENSGT00940000158915 #30 ENSGT00940000159465 #31 ENSGT00940000155107.a.a #32 ENSGT00390000015257 ENSGT00940000156553 #20 ENSGT00390000003012 #19 ENSGT00810000125524 #18 ENSGT00940000158871 #17 Polar bear MODERN SPECIES 189 ENSUMAG00000007559 NCDN (ENSUMAG00000007557) TFAP2E (ENSUMAG00000007555) PSMB2 (ENSUMAG00000007547) C1orf216 (ENSUMAG00000007539) ENSUMAG00000007536 ENSUMAG00000007529 AGO4 (ENSUMAG00000006297) AGO1 (ENSUMAG00000002480) ENSUMAG00000002065 ENSUMAG00000002033 TEKT2 (ENSUMAG00000002004) ADPRS (ENSUMAG00000001988) COL8A2 (ENSUMAG00000001984) TRAPPC3 (ENSUMAG00000001979) MAP7D1 (ENSUMAG00000001773) #22 THRAP3 (ENSUMAG00000001744) #23 ENSUMAG00000001726 #24 STK40 (ENSUMAG00000001453) #26 LSM10 (ENSUMAG00000001438) ENSUMAG00000001369 #27 MRPS15 (ENSUMAG00000001358) #29 CSF3R (ENSUMAG00000001333) #30 GRIK3 (ENSUMAG00000001150) #31 ZC3H12A (ENSUMAG00000001122) #32 MEAF6 (ENSUMAG00000001101) SNIP1 (ENSUMAG00000001093) #20 DNALI1 (ENSUMAG00000001085) #19 GNL2 (ENSUMAG00000000413) #18 RSPO1 (ENSUMAG00000000320) #17 C1orf109 (ENSUMAG00000000310) American black bear MODERN SPECIES 7064 MAP7D1 (ENSUAMG00000023752) #22 Giant Panda MODERN SPECIES 11 SFPQ (ENSAMEG00000000815) ZMYM4 (ENSAMEG00000000760) KIAA0319L (ENSAMEG00000000737) NCDN (ENSAMEG00000000724) TFAP2E (ENSAMEG00000028474) PSMB2 (ENSAMEG00000000715) C1orf216 (ENSAMEG00000018544) CLSPN (ENSAMEG00000000679) AGO4 (ENSAMEG00000000573) AGO1 (ENSAMEG00000000504) AGO3 (ENSAMEG00000000497) TEKT2 (ENSAMEG00000000473) ADPRS (ENSAMEG00000025564) COL8A2 (ENSAMEG00000000461) TRAPPC3 (ENSAMEG00000000457) MAP7D1 (ENSAMEG00000000412) #22 ENSAMEG00000024644 #23 ENSAMEG00000028122 #23 ENSAMEG00000001385 #24 EVA1B (ENSAMEG00000031396) ##25 STK40 (ENSAMEG00000001415) #26 LSM10 (ENSAMEG00000019854) OSCP1 (ENSAMEG00000001437) #27 MRPS15 (ENSAMEG00000001463) #29 CSF3R (ENSAMEG00000001480) #30 GRIK3 (ENSAMEG00000001517) #31 ZC3H12A (ENSAMEG00000000991) #32 MEAF6 (ENSAMEG00000027272) SNIP1 (ENSAMEG00000001009) #20 DNALI1 (ENSAMEG00000001019) #19 GNL2 (ENSAMEG00000001032) #18 Felidae ANCESTRAL SPECIES 18 ENSGT00940000159550 ENSGT00940000157613 ENSGT00910000144152.b.b.b ENSGT00390000013601 ENSGT00950000182848.c.b.b.a ENSGT00640000091536 ENSGT00390000001867 ENSGT00390000012738 ENSGT00940000158729 ENSGT00940000158568 ENSGT00940000155256 ENSGT00950000182894.D ENSGT00390000015369 ENSGT00940000154317.a.a ENSGT00390000003880.b.a ENSGT00950000182941.a.a.b #22 ENSGT00950000183163.a.a #23 ENSGT00940000160627 #24 ENSGT00940000154096.b.b.b.b.a ##25 ENSGT00950000182986.b #26 ENSGT00510000048364 ENSGT00390000004808 #27 ENSGT00390000001737 #29 ENSGT00940000158915 #30 ENSGT00550000074698.k.a.b.a.a.a ENSGT00940000159465 #31 ENSGT00940000155107.a.a #32 ENSGT00390000015257 ENSGT00940000156553 #20 ENSGT00390000003012 #19 ENSGT00810000125524 #18 Panthera ANCESTRAL SPECIES 4 ENSGT00940000159550 ENSGT00940000157613 ENSGT00910000144152.b.b.b ENSGT00390000013601 ENSGT00950000182848.c.b.b.a ENSGT00640000091536 ENSGT00390000001867 ENSGT00390000012738 ENSGT00940000158729 ENSGT00940000158568 ENSGT00940000155256 ENSGT00950000182894.D ENSGT00390000015369 ENSGT00940000154317.a.a ENSGT00390000003880.b.a ENSGT00950000182941.a.a.b #22 ENSGT00950000183163.a.a #23 ENSGT00940000160627 #24 ENSGT00940000154096.b.b.b.b.a ##25 ENSGT00950000182986.b #26 ENSGT00510000048364 ENSGT00390000004808 #27 ENSGT00390000001737 #29 ENSGT00940000158915 #30 ENSGT00550000074698.k.a.b.a.a.a ENSGT00940000159465 #31 ENSGT00940000155107.a.a #32 ENSGT00390000015257 ENSGT00940000156553 #20 ENSGT00390000003012 #19 ENSGT00810000125524 #18 Panthera_a ANCESTRAL SPECIES 14 ENSGT00940000159550 ENSGT00940000157613 ENSGT00910000144152.b.b.b ENSGT00390000013601 ENSGT00950000182848.c.b.b.a ENSGT00640000091536 ENSGT00390000001867 ENSGT00390000012738 ENSGT00940000158729 ENSGT00940000158568 ENSGT00940000155256 ENSGT00950000182894.D ENSGT00390000015369 ENSGT00940000154317.a.a ENSGT00390000003880.b.a ENSGT00950000182941.a.a.b #22 ENSGT00950000183163.a.a #23 ENSGT00940000160627 #24 ENSGT00940000154096.b.b.b.b.a ##25 ENSGT00950000182986.b #26 ENSGT00510000048364 ENSGT00390000004808 #27 ENSGT00390000001737 #29 ENSGT00940000158915 #30 ENSGT00550000074698.k.a.b.a.a.a ENSGT00940000159465 #31 ENSGT00940000155107.a.a #32 ENSGT00390000015257 ENSGT00940000156553 #20 ENSGT00390000003012 #19 ENSGT00810000125524 #18 lion MODERN SPECIES 8 ZMYM4 (ENSPLOG00000004756) KIAA0319L (ENSPLOG00000022058) NCDN (ENSPLOG00000022040) TFAP2E (ENSPLOG00000022025) PSMB2 (ENSPLOG00000022003) C1orf216 (ENSPLOG00000021988) ENSPLOG00000021982 CLSPN (ENSPLOG00000021959) AGO1 (ENSPLOG00000021894) AGO4 (ENSPLOG00000021693) ENSPLOG00000021615 TEKT2 (ENSPLOG00000021579) ADPRS (ENSPLOG00000021546) COL8A2 (ENSPLOG00000021527) TRAPPC3 (ENSPLOG00000021495) MAP7D1 (ENSPLOG00000021300) #22 THRAP3 (ENSPLOG00000021215) #23 ENSPLOG00000021161 EVA1B (ENSPLOG00000021132) ##25 STK40 (ENSPLOG00000021083) #26 ENSPLOG00000021048 OSCP1 (ENSPLOG00000020969) #27 MRPS15 (ENSPLOG00000020901) #29 CSF3R (ENSPLOG00000020805) #30 GRIK3 (ENSPLOG00000020707) #31 ZC3H12A (ENSPLOG00000020649) #32 MEAF6 (ENSPLOG00000020523) SNIP1 (ENSPLOG00000020485) #20 DNALI1 (ENSPLOG00000020424) #19 GNL2 (ENSPLOG00000020381) #18 RSPO1 (ENSPLOG00000020291) #17 leopard MODERN SPECIES 130 ZMYM4 (ENSPPRG00000013260) KIAA0319L (ENSPPRG00000012492) ENSPPRG00000011950 NCDN (ENSPPRG00000010663) TFAP2E (ENSPPRG00000010109) PSMB2 (ENSPPRG00000009440) C1orf216 (ENSPPRG00000015355) CLSPN (ENSPPRG00000008963) AGO4 (ENSPPRG00000006520) AGO1 (ENSPPRG00000006475) AGO3 (ENSPPRG00000005934) TEKT2 (ENSPPRG00000005344) ADPRS (ENSPPRG00000004988) COL8A2 (ENSPPRG00000004825) TRAPPC3 (ENSPPRG00000004660) MAP7D1 (ENSPPRG00000003580) #22 THRAP3 (ENSPPRG00000001735) #23 SH3D21 (ENSPPRG00000001082) #24 EVA1B (ENSPPRG00000023067) ##25 STK40 (ENSPPRG00000023089) #26 LSM10 (ENSPPRG00000014619) OSCP1 (ENSPPRG00000024092) #27 MRPS15 (ENSPPRG00000024277) #29 CSF3R (ENSPPRG00000024429) #30 ENSPPRG00000019275 GRIK3 (ENSPPRG00000017558) #31 ZC3H12A (ENSPPRG00000014359) #32 MEAF6 (ENSPPRG00000012769) SNIP1 (ENSPPRG00000011313) #20 DNALI1 (ENSPPRG00000010993) #19 GNL2 (ENSPPRG00000010528) #18 Tiger MODERN SPECIES 383 ENSPTIG00000007710 ZMYM4 (ENSPTIG00000008677) KIAA0319L (ENSPTIG00000011048) NCDN (ENSPTIG00000012074) TFAP2E (ENSPTIG00000014612) PSMB2 (ENSPTIG00000015407) C1orf216 (ENSPTIG00000003921) CLSPN (ENSPTIG00000016555) AGO4 (ENSPTIG00000020262) AGO1 (ENSPTIG00000020991) AGO3 (ENSPTIG00000001029) TEKT2 (ENSPTIG00000009996) ADPRS (ENSPTIG00000010575) COL8A2 (ENSPTIG00000011151) TRAPPC3 (ENSPTIG00000011666) MAP7D1 (ENSPTIG00000012934) #22 THRAP3 (ENSPTIG00000016888) #23 SH3D21 (ENSPTIG00000017828) #24 ENSPTIG00000020226 STK40 (ENSPTIG00000020622) #26 LSM10 (ENSPTIG00000004613) OSCP1 (ENSPTIG00000021848) #27 MRPS15 (ENSPTIG00000022020) #29 CSF3R (ENSPTIG00000002473) #30 ENSPTIG00000009786 GRIK3 (ENSPTIG00000010943) #31 ZC3H12A (ENSPTIG00000012943) #32 MEAF6 (ENSPTIG00000013885) SNIP1 (ENSPTIG00000014216) #20 DNALI1 (ENSPTIG00000014464) #19 GNL2 (ENSPTIG00000015095) #18 Cat MODERN SPECIES 239 ZMYM4 (ENSFCAG00000029162) KIAA0319L (ENSFCAG00000013873) ENSFCAG00000038220 NCDN (ENSFCAG00000013876) TFAP2E (ENSFCAG00000013878) PSMB2 (ENSFCAG00000030845) CC1H1orf216 (ENSFCAG00000013881) CLSPN (ENSFCAG00000013882) AGO4 (ENSFCAG00000006218) AGO1 (ENSFCAG00000000746) AGO3 (ENSFCAG00000000747) TEKT2 (ENSFCAG00000012461) ADPRS (ENSFCAG00000012465) COL8A2 (ENSFCAG00000042990) TRAPPC3 (ENSFCAG00000043644) MAP7D1 (ENSFCAG00000012469) #22 THRAP3 (ENSFCAG00000014127) #23 SH3D21 (ENSFCAG00000051592) #24 EVA1B (ENSFCAG00000026800) ##25 STK40 (ENSFCAG00000005262) #26 LSM10 (ENSFCAG00000047113) OSCP1 (ENSFCAG00000005258) #27 MRPS15 (ENSFCAG00000005265) #29 CSF3R (ENSFCAG00000013269) #30 ENSFCAG00000029626 GRIK3 (ENSFCAG00000005150) #31 ZC3H12A (ENSFCAG00000008757) #32 MEAF6 (ENSFCAG00000038230) SNIP1 (ENSFCAG00000008758) #20 DNALI1 (ENSFCAG00000008759) #19 GNL2 (ENSFCAG00000008760) #18 Laurasiatheria_c ANCESTRAL SPECIES ENSGT00940000156221 ENSGT00940000159550 ENSGT00940000157613 ENSGT00390000013601 ENSGT00950000182848.c.b.b.a ENSGT00640000091536 ENSGT00390000001867 ENSGT00390000012738 ENSGT00940000158729 ENSGT00940000158568 ENSGT00940000155256 ENSGT00950000182894.D ENSGT00390000015369 ENSGT00940000154317.a.a ENSGT00390000003880.b.a ENSGT00950000182941.a.a.b #22 ENSGT00950000183163.a.a #23 ENSGT00940000160627 #24 ENSGT00940000154096.b.b.b.b.a ##25 ENSGT00950000182986.b #26 ENSGT00510000048364 ENSGT00390000004808 #27 ENSGT00390000001737 #29 ENSGT00940000158915 #30 ENSGT00940000159465 #31 ENSGT00940000155107.a.a #32 ENSGT00390000015257 ENSGT00940000156553 #20 ENSGT00390000003012 #19 ENSGT00810000125524 #18 ENSGT00940000158871 #17 Equus ANCESTRAL SPECIES 2 ENSGT00940000156221 ENSGT00940000159550 ENSGT00940000157613 ENSGT00390000013601 ENSGT00950000182848.c.b.b.a ENSGT00640000091536 ENSGT00390000001867 ENSGT00390000012738 ENSGT00940000158729 ENSGT00940000158568 ENSGT00940000155256 ENSGT00950000182894.D ENSGT00390000015369 ENSGT00940000154317.a.a ENSGT00390000003880.b.a ENSGT00950000182941.a.a.b #22 ENSGT00950000183163.a.a #23 ENSGT00940000160627 #24 ENSGT00940000154096.b.b.b.b.a ##25 ENSGT00950000182986.b #26 ENSGT00510000048364 ENSGT00390000004808 #27 ENSGT00390000001737 #29 ENSGT00940000158915 #30 ENSGT01030000238136 ENSGT00940000159465 #31 ENSGT00940000171437 ENSGT00940000155107.a.a #32 ENSGT00390000015257 ENSGT00940000156553 #20 ENSGT00390000003012 #19 Donkey MODERN SPECIES 25 SFPQ (ENSEASG00005012012) ZMYM4 (ENSEASG00005012020) KIAA0319L (ENSEASG00005012027) NCDN (ENSEASG00005012034) TFAP2E (ENSEASG00005012037) PSMB2 (ENSEASG00005012040) C1orf216 (ENSEASG00005029553) CLSPN (ENSEASG00005012055) AGO4 (ENSEASG00005012079) AGO1 (ENSEASG00005012086) AGO3 (ENSEASG00005012089) TEKT2 (ENSEASG00005012098) ADPRS (ENSEASG00005012163) COL8A2 (ENSEASG00005012168) TRAPPC3 (ENSEASG00005038259) MAP7D1 (ENSEASG00005012176) #22 THRAP3 (ENSEASG00005012182) #23 ENSEASG00005012187 #24 EVA1B (ENSEASG00005012191) ##25 STK40 (ENSEASG00005012192) #26 LSM10 (ENSEASG00005031673) OSCP1 (ENSEASG00005012195) #27 MRPS15 (ENSEASG00005032042) #29 CSF3R (ENSEASG00005012209) #30 ENSEASG00005012213 GRIK3 (ENSEASG00005012214) #31 ENSEASG00005012219 MEAF6 (ENSEASG00005012221) SNIP1 (ENSEASG00005012223) #20 DNALI1 (ENSEASG00005024722) #19 GNL2 (ENSEASG00005012227) #18 Horse MODERN SPECIES 11 ENSECAG00000055111 ZMYM4 (ENSECAG00000008800) NCDN (ENSECAG00000008891) KIAA0319L (ENSECAG00000012927) TFAP2E (ENSECAG00000003027) PSMB2 (ENSECAG00000021615) C2H1orf216 (ENSECAG00000005102) CLSPN (ENSECAG00000009472) AGO4 (ENSECAG00000023972) AGO1 (ENSECAG00000024353) AGO3 (ENSECAG00000051188) TEKT2 (ENSECAG00000017670) ADPRS (ENSECAG00000013445) COL8A2 (ENSECAG00000012799) TRAPPC3 (ENSECAG00000012569) MAP7D1 (ENSECAG00000001581) #22 THRAP3 (ENSECAG00000021207) #23 SH3D21 (ENSECAG00000020556) #24 STK40 (ENSECAG00000015678) #26 LSM10 (ENSECAG00000005071) OSCP1 (ENSECAG00000008850) #27 MRPS15 (ENSECAG00000000933) #29 CSF3R (ENSECAG00000013457) #30 ENSECAG00000040086 GRIK3 (ENSECAG00000010275) #31 ENSECAG00000032155 ZC3H12A (ENSECAG00000009562) #32 MEAF6 (ENSECAG00000022449) SNIP1 (ENSECAG00000021869) #20 DNALI1 (ENSECAG00000018337) #19 GNL2 (ENSECAG00000008068) #18 Chiroptera ANCESTRAL SPECIES ENSGT00940000156221 ENSGT00940000159550 ENSGT00940000157613 ENSGT00390000013601 ENSGT00950000182848.c.b.b.a ENSGT00640000091536 ENSGT00390000001867 ENSGT00390000012738 ENSGT00940000158729 ENSGT00940000158568 ENSGT00940000155256 ENSGT00950000182894.D ENSGT00390000015369 ENSGT00940000154317.a.a ENSGT00390000003880.b.a ENSGT00950000182941.a.a.b #22 ENSGT00950000183163.a.a #23 ENSGT00940000160627 #24 ENSGT00940000154096.b.b.b.b.a ##25 ENSGT00950000182986.b #26 ENSGT00510000048364 ENSGT00390000004808 #27 ENSGT00390000001737 #29 ENSGT00940000158915 #30 ENSGT00940000159465 #31 ENSGT00940000155107.a.a #32 ENSGT00390000015257 ENSGT00940000156553 #20 ENSGT00390000003012 #19 ENSGT00810000125524 #18 ENSGT00940000158871 #17 Microchiroptera ANCESTRAL SPECIES 1 ENSGT00940000156221 ENSGT00940000159550 ENSGT00940000157613 ENSGT00390000013601 ENSGT00950000182848.c.b.b.a ENSGT00640000091536 ENSGT00390000001867 ENSGT00390000012738 ENSGT00940000158729 ENSGT00940000158568 ENSGT00940000155256 ENSGT00950000182894.D ENSGT00390000015369 ENSGT00940000154317.a.a ENSGT00390000003880.b.a ENSGT00950000182941.a.a.b #22 ENSGT00950000183163.a.a #23 ENSGT00940000160627 #24 ENSGT00940000154096.b.b.b.b.a ##25 ENSGT00950000182986.b #26 ENSGT00510000048364 ENSGT00390000004808 #27 ENSGT00390000001737 #29 ENSGT00940000158915 #30 ENSGT00940000159465 #31 ENSGT00940000155107.a.a #32 ENSGT00390000015257 ENSGT00940000156553 #20 ENSGT00390000003012 #19 ENSGT00810000125524 #18 ENSGT00940000158871 #17 Greater horseshoe bat MODERN SPECIES 27 SFPQ (ENSRFEG00010001256) ZMYM4 (ENSRFEG00010001311) KIAA0319L (ENSRFEG00010001380) NCDN (ENSRFEG00010001441) TFAP2E (ENSRFEG00010001481) ENSRFEG00010001507 C1orf216 (ENSRFEG00010001522) CLSPN (ENSRFEG00010001591) AGO4 (ENSRFEG00010001742) AGO1 (ENSRFEG00010001802) AGO3 (ENSRFEG00010001891) TEKT2 (ENSRFEG00010001943) ADPRS (ENSRFEG00010001958) COL8A2 (ENSRFEG00010001979) TRAPPC3 (ENSRFEG00010002008) MAP7D1 (ENSRFEG00010002111) #22 THRAP3 (ENSRFEG00010002289) #23 ENSRFEG00010002356 EVA1B (ENSRFEG00010002372) ##25 STK40 (ENSRFEG00010002403) #26 LSM10 (ENSRFEG00010002437) OSCP1 (ENSRFEG00010002458) #27 MRPS15 (ENSRFEG00010002496) #29 CSF3R (ENSRFEG00010002521) #30 ENSRFEG00010002566 GRIK3 (ENSRFEG00010002581) #31 ZC3H12A (ENSRFEG00010002614) #32 MEAF6 (ENSRFEG00010002688) SNIP1 (ENSRFEG00010002767) #20 DNALI1 (ENSRFEG00010002793) #19 GNL2 (ENSRFEG00010002826) #18 Microbat MODERN SPECIES 1068 ZMYM4 (ENSMLUG00000004018) ENSMLUG00000026401 KIAA0319L (ENSMLUG00000004024) NCDN (ENSMLUG00000009374) TFAP2E (ENSMLUG00000009852) PSMB2 (ENSMLUG00000009862) C1orf216 (ENSMLUG00000017091) CLSPN (ENSMLUG00000017093) AGO4 (ENSMLUG00000017102) AGO1 (ENSMLUG00000009628) AGO3 (ENSMLUG00000009668) TEKT2 (ENSMLUG00000011491) ADPRS (ENSMLUG00000027862) COL8A2 (ENSMLUG00000011023) TRAPPC3 (ENSMLUG00000002140) MAP7D1 (ENSMLUG00000012362) #22 THRAP3 (ENSMLUG00000006447) #23 ENSMLUG00000006453 #24 ENSMLUG00000006458 EVA1B (ENSMLUG00000024745) ##25 STK40 (ENSMLUG00000006463) #26 LSM10 (ENSMLUG00000023895) OSCP1 (ENSMLUG00000006472) #27 MRPS15 (ENSMLUG00000006475) #29 CSF3R (ENSMLUG00000006479) #30 Megabat MODERN SPECIES 650 AGO4 (ENSPVAG00000005079) AGO1 (ENSPVAG00000005082) AGO3 (ENSPVAG00000005086) TEKT2 (ENSPVAG00000005089) ADPRS (ENSPVAG00000005090) ENSPVAG00000005091 TRAPPC3 (ENSPVAG00000005094) MAP7D1 (ENSPVAG00000005095) #22 Artiodactyla ANCESTRAL SPECIES ENSGT00940000159550 ENSGT00940000157613 ENSGT00390000013601 ENSGT00950000182848.c.b.b.a ENSGT00640000091536 ENSGT00390000001867 ENSGT00390000012738 ENSGT00940000158729 ENSGT00940000158568 ENSGT00940000155256 ENSGT00390000012030.a ENSGT00950000182894.D ENSGT00390000015369 ENSGT00940000154317.a.a ENSGT00390000003880.b.a ENSGT00950000182941.a.a.b #22 ENSGT00950000183163.a.a #23 ENSGT00940000160627 #24 ENSGT00940000154096.b.b.b.b.a ##25 ENSGT00950000182986.b #26 ENSGT00510000048364 ENSGT00390000004808 #27 ENSGT00390000001737 #29 ENSGT00940000158915 #30 ENSGT00940000159465 #31 ENSGT00940000155107.a.a #32 ENSGT00390000015257 ENSGT00940000156553 #20 ENSGT00390000003012 #19 ENSGT00810000125524 #18 ENSGT00940000158871 #17 Suina ANCESTRAL SPECIES 10 ENSGT00940000156221 ENSGT00940000159550 ENSGT00940000157613 ENSGT00390000013601 ENSGT00950000182848.c.b.b.a ENSGT00640000091536 ENSGT00390000001867 ENSGT00390000012738 ENSGT00940000158729 ENSGT00940000158568 ENSGT00940000155256 ENSGT00950000182894.D ENSGT00390000015369 ENSGT00940000154317.a.a ENSGT00390000003880.b.a ENSGT00950000182941.a.a.b #22 ENSGT00950000183163.a.a #23 ENSGT00940000160627 #24 ENSGT00940000154096.b.b.b.b.a ##25 ENSGT00950000182986.b #26 ENSGT00510000048364 ENSGT00390000004808 #27 ENSGT00390000001737 #29 ENSGT00940000158915 #30 ENSGT00940000159465 #31 ENSGT00940000155107.a.a #32 ENSGT00390000015257 ENSGT00940000156553 #20 ENSGT00390000003012 #19 ENSGT00810000125524 #18 ENSGT00940000158871 #17 Chacoan peccary MODERN SPECIES 39 KIAA0319L (ENSCWAG00000009706) NCDN (ENSCWAG00000009618) TFAP2E (ENSCWAG00000009465) PSMB2 (ENSCWAG00000009415) C1orf216 (ENSCWAG00000009403) CLSPN (ENSCWAG00000009253) ENSCWAG00000009201 AGO4 (ENSCWAG00000009127) AGO1 (ENSCWAG00000009026) ENSCWAG00000008976 ENSCWAG00000008735 TEKT2 (ENSCWAG00000008694) ADPRS (ENSCWAG00000008618) COL8A2 (ENSCWAG00000008567) TRAPPC3 (ENSCWAG00000008474) MAP7D1 (ENSCWAG00000008245) #22 THRAP3 (ENSCWAG00000008133) #23 ENSCWAG00000008017 EVA1B (ENSCWAG00000007937) ##25 STK40 (ENSCWAG00000007890) #26 LSM10 (ENSCWAG00000007870) OSCP1 (ENSCWAG00000007749) #27 MRPS15 (ENSCWAG00000007709) #29 CSF3R (ENSCWAG00000007434) #30 GRIK3 (ENSCWAG00000007280) #31 ENSCWAG00000007239 #32 MEAF6 (ENSCWAG00000007151) SNIP1 (ENSCWAG00000007114) #20 DNALI1 (ENSCWAG00000007051) #19 GNL2 (ENSCWAG00000007009) #18 RSPO1 (ENSCWAG00000006919) #17 Pig MODERN SPECIES 14 KIAA0319L (ENSSSCG00000037121) ENSSSCG00000062913 NCDN (ENSSSCG00000031786) TFAP2E (ENSSSCG00000040097) PSMB2 (ENSSSCG00000035914) ENSSSCG00000037699 C1orf216 (ENSSSCG00000037600) CLSPN (ENSSSCG00000003628) AGO3 (ENSSSCG00000003630) ENSSSCG00000055207 ENSSSCG00000003632 TEKT2 (ENSSSCG00000003633) ADPRS (ENSSSCG00000003634) COL8A2 (ENSSSCG00000033641) TRAPPC3 (ENSSSCG00000037213) MAP7D1 (ENSSSCG00000003637) #22 THRAP3 (ENSSSCG00000029954) #23 ENSSSCG00000028892 #24 EVA1B (ENSSSCG00000033892) ##25 STK40 (ENSSSCG00000036832) #26 LSM10 (ENSSSCG00000038916) OSCP1 (ENSSSCG00000036709) #27 MRPS15 (ENSSSCG00000034647) #29 CSF3R (ENSSSCG00000025795) #30 GRIK3 (ENSSSCG00000003640) #31 ZC3H12A (ENSSSCG00000037815) #32 MEAF6 (ENSSSCG00000034611) SNIP1 (ENSSSCG00000029991) #20 DNALI1 (ENSSSCG00000058884) #19 GNL2 (ENSSSCG00000031631) #18 RSPO1 (ENSSSCG00000032240) #17 Artiodactyla_a ANCESTRAL SPECIES ENSGT00940000159550 ENSGT00940000157613 ENSGT00390000013601 ENSGT00950000182848.c.b.b.a ENSGT00640000091536 ENSGT00390000001867 ENSGT00390000012738 ENSGT00940000158729 ENSGT00940000158568 ENSGT00940000155256 ENSGT00390000012030.a ENSGT00950000182894.D ENSGT00390000015369 ENSGT00940000154317.a.a ENSGT00390000003880.b.a ENSGT00950000182941.a.a.b #22 ENSGT00950000183163.a.a #23 ENSGT00940000160627 #24 ENSGT00940000154096.b.b.b.b.a ##25 ENSGT00950000182986.b #26 ENSGT00510000048364 ENSGT00390000004808 #27 ENSGT00390000001737 #29 ENSGT00940000158915 #30 ENSGT00940000159465 #31 ENSGT00940000155107.a.a #32 ENSGT00390000015257 ENSGT00940000156553 #20 ENSGT00390000003012 #19 ENSGT00810000125524 #18 ENSGT00940000158871 #17 Artiodactyla_b ANCESTRAL SPECIES ENSGT00940000159550 ENSGT00940000157613 ENSGT00390000013601 ENSGT00950000182848.c.b.b.a ENSGT00640000091536 ENSGT00390000001867 ENSGT00390000012738 ENSGT00940000158729 ENSGT00940000158568 ENSGT00940000155256 ENSGT00390000012030.a ENSGT00950000182894.D ENSGT00390000015369 ENSGT00940000154317.a.a ENSGT00390000003880.b.a ENSGT00950000182941.a.a.b #22 ENSGT00950000183163.a.a #23 ENSGT00940000160627 #24 ENSGT00940000154096.b.b.b.b.a ##25 ENSGT00950000182986.b #26 ENSGT00510000048364 ENSGT00390000004808 #27 ENSGT00390000001737 #29 ENSGT00940000158915 #30 ENSGT00940000159465 #31 ENSGT00940000155107.a.a #32 ENSGT00390000015257 ENSGT00940000156553 #20 ENSGT00390000003012 #19 ENSGT00810000125524 #18 ENSGT00940000158871 #17 Pecora ANCESTRAL SPECIES 2 ENSGT00940000159550 ENSGT00940000157613 ENSGT00390000013601 ENSGT00950000182848.c.b.b.a ENSGT00640000091536 ENSGT00390000001867 ENSGT00390000012738 ENSGT00940000158729 ENSGT00940000158568 ENSGT00940000155256 ENSGT00390000012030.a ENSGT00950000182894.D ENSGT00390000015369 ENSGT00940000154317.a.a ENSGT00390000003880.b.a ENSGT00950000182941.a.a.b #22 ENSGT00950000183163.a.a #23 ENSGT00940000160627 #24 ENSGT00940000154096.b.b.b.b.a ##25 ENSGT00950000182986.b #26 ENSGT00510000048364 ENSGT00390000004808 #27 ENSGT00390000001737 #29 ENSGT00940000158915 #30 ENSGT00940000159465 #31 ENSGT00940000155107.a.a #32 ENSGT00390000015257 ENSGT00940000156553 #20 ENSGT00390000003012 #19 ENSGT00810000125524 #18 ENSGT00940000158871 #17 Yarkand deer MODERN SPECIES 12 KIAA0319L (ENSCHYG00000027073) NCDN (ENSCHYG00000027067) TFAP2E (ENSCHYG00000027065) PSMB2 (ENSCHYG00000027060) C1orf216 (ENSCHYG00000027059) CLSPN (ENSCHYG00000027053) ENSCHYG00000027052 AGO4 (ENSCHYG00000027041) ENSCHYG00000027036 AGO3 (ENSCHYG00000027029) ENSCHYG00000027026 TEKT2 (ENSCHYG00000027024) ADPRS (ENSCHYG00000027021) COL8A2 (ENSCHYG00000027017) TRAPPC3 (ENSCHYG00000027012) MAP7D1 (ENSCHYG00000027002) #22 ENSCHYG00000026996 THRAP3 (ENSCHYG00000026991) #23 SH3D21 (ENSCHYG00000026983) #24 EVA1B (ENSCHYG00000026978) ##25 STK40 (ENSCHYG00000026974) #26 LSM10 (ENSCHYG00000026972) OSCP1 (ENSCHYG00000026967) #27 MRPS15 (ENSCHYG00000026961) #29 CSF3R (ENSCHYG00000026959) #30 GRIK3 (ENSCHYG00000026942) #31 ENSCHYG00000026936 ZC3H12A (ENSCHYG00000026932) #32 SNIP1 (ENSCHYG00000026912) #20 DNALI1 (ENSCHYG00000026895) #19 GNL2 (ENSCHYG00000026865) #18 Percora_a ANCESTRAL SPECIES 1 ENSGT00940000159550 ENSGT00940000157613 ENSGT00390000013601 ENSGT00950000182848.c.b.b.a ENSGT00640000091536 ENSGT00390000001867 ENSGT00390000012738 ENSGT00940000158729 ENSGT00940000158568 ENSGT00940000155256 ENSGT00390000012030.a ENSGT00950000182894.D ENSGT00390000015369 ENSGT00940000154317.a.a ENSGT00390000003880.b.a ENSGT00950000182941.a.a.b #22 ENSGT00950000183163.a.a #23 ENSGT00940000160627 #24 ENSGT00940000154096.b.b.b.b.a ##25 ENSGT00950000182986.b #26 ENSGT00510000048364 ENSGT00390000004808 #27 ENSGT00390000001737 #29 ENSGT00940000158915 #30 ENSGT00940000159465 #31 ENSGT00940000155107.a.a #32 ENSGT00390000015257 ENSGT00940000156553 #20 ENSGT00390000003012 #19 ENSGT00810000125524 #18 ENSGT00940000158871 #17 Siberian musk deer MODERN SPECIES 4 ZMYM4 (ENSMMSG00000009791) KIAA0319L (ENSMMSG00000009718) NCDN (ENSMMSG00000009667) TFAP2E (ENSMMSG00000009625) PSMB2 (ENSMMSG00000009599) C1orf216 (ENSMMSG00000009587) CLSPN (ENSMMSG00000009515) AGO4 (ENSMMSG00000009404) AGO1 (ENSMMSG00000009238) AGO3 (ENSMMSG00000009092) ENSMMSG00000009060 TEKT2 (ENSMMSG00000008997) ADPRS (ENSMMSG00000008967) COL8A2 (ENSMMSG00000008947) TRAPPC3 (ENSMMSG00000008867) MAP7D1 (ENSMMSG00000008733) #22 THRAP3 (ENSMMSG00000008671) #23 SH3D21 (ENSMMSG00000008627) #24 EVA1B (ENSMMSG00000008604) ##25 STK40 (ENSMMSG00000008536) #26 LSM10 (ENSMMSG00000008521) OSCP1 (ENSMMSG00000008440) #27 MRPS15 (ENSMMSG00000008409) #29 CSF3R (ENSMMSG00000008372) #30 GRIK3 (ENSMMSG00000008231) #31 ZC3H12A (ENSMMSG00000008185) #32 MEAF6 (ENSMMSG00000008080) ENSMMSG00000008041 #20 DNALI1 (ENSMMSG00000007981) #19 GNL2 (ENSMMSG00000007948) #18 RSPO1 (ENSMMSG00000007885) #17 Bovidae ANCESTRAL SPECIES 1 ENSGT00940000159550 ENSGT00940000157613 ENSGT00390000013601 ENSGT00950000182848.c.b.b.a ENSGT00640000091536 ENSGT00390000001867 ENSGT00390000012738 ENSGT00940000158729 ENSGT00940000158568 ENSGT00940000155256 ENSGT00390000012030.a ENSGT00950000182894.D ENSGT00390000015369 ENSGT00940000154317.a.a ENSGT00390000003880.b.a ENSGT00950000182941.a.a.b #22 ENSGT00950000183163.a.a #23 ENSGT00940000160627 #24 ENSGT00940000154096.b.b.b.b.a ##25 ENSGT00950000182986.b #26 ENSGT00510000048364 ENSGT00390000004808 #27 ENSGT00390000001737 #29 ENSGT00940000158915 #30 ENSGT00940000159465 #31 ENSGT00940000155107.a.a #32 ENSGT00390000015257 ENSGT00940000156553 #20 ENSGT00390000003012 #19 ENSGT00810000125524 #18 ENSGT00940000158871 #17 Caprinae ANCESTRAL SPECIES 2 ENSGT00940000159550 ENSGT00940000157613 ENSGT00390000013601 ENSGT00950000182848.c.b.b.a ENSGT00640000091536 ENSGT00390000001867 ENSGT00390000012738 ENSGT00940000158729 ENSGT00940000158568 ENSGT00940000155256 ENSGT00390000012030.a ENSGT00950000182894.D ENSGT00390000015369 ENSGT00940000154317.a.a ENSGT00390000003880.b.a ENSGT00950000182941.a.a.b #22 ENSGT00950000183163.a.a #23 ENSGT00940000160627 #24 ENSGT00940000154096.b.b.b.b.a ##25 ENSGT00950000182986.b #26 ENSGT00510000048364 ENSGT00390000004808 #27 ENSGT00390000001737.j #29 ENSGT00940000158915 #30 ENSGT00940000159465 #31 ENSGT00940000155107.a.a #32 ENSGT00390000015257 ENSGT00940000156553 #20 ENSGT00390000003012 #19 ENSGT00810000125524 #18 ENSGT00940000158871 #17 Rambouillet Sheep MODERN SPECIES ENSOARG00020010396 KIAA0319L (ENSOARG00020010426) NCDN (ENSOARG00020010602) TFAP2E (ENSOARG00020010658) PSMB2 (ENSOARG00020010787) C1orf216 (ENSOARG00020010859) CLSPN (ENSOARG00020010932) AGO4 (ENSOARG00020012103) AGO1 (ENSOARG00020012325) AGO3 (ENSOARG00020012702) ENSOARG00020012933 TEKT2 (ENSOARG00020012976) ADPRS (ENSOARG00020013078) COL8A2 (ENSOARG00020013134) TRAPPC3 (ENSOARG00020013190) MAP7D1 (ENSOARG00020013418) #22 THRAP3 (ENSOARG00020013606) #23 ENSOARG00020013812 #24 EVA1B (ENSOARG00020014434) ##25 STK40 (ENSOARG00020014470) #26 LSM10 (ENSOARG00020014526) OSCP1 (ENSOARG00020014556) #27 MRPS15 (ENSOARG00020014966) #29 CSF3R (ENSOARG00020015107) #30 GRIK3 (ENSOARG00020015177) #31 ZC3H12A (ENSOARG00020015441) #32 MEAF6 (ENSOARG00020015561) SNIP1 (ENSOARG00020015736) #20 DNALI1 (ENSOARG00020015777) #19 GNL2 (ENSOARG00020015915) #18 RSPO1 (ENSOARG00020016022) #17 Goat MODERN SPECIES 22 ENSCHIG00000026273 KIAA0319L (ENSCHIG00000020470) ENSCHIG00000016571 NCDN (ENSCHIG00000026559) TFAP2E (ENSCHIG00000021809) PSMB2 (ENSCHIG00000016929) C1orf216 (ENSCHIG00000008904) CLSPN (ENSCHIG00000023309) AGO4 (ENSCHIG00000026564) ENSCHIG00000011848 AGO3 (ENSCHIG00000011536) TEKT2 (ENSCHIG00000026732) ADPRS (ENSCHIG00000011636) COL8A2 (ENSCHIG00000023849) TRAPPC3 (ENSCHIG00000015948) MAP7D1 (ENSCHIG00000003118) #22 THRAP3 (ENSCHIG00000022784) #23 ENSCHIG00000018156 #24 EVA1B (ENSCHIG00000011422) ##25 STK40 (ENSCHIG00000020883) #26 LSM10 (ENSCHIG00000009398) OSCP1 (ENSCHIG00000012198) #27 ENSCHIG00000016923 #29 CSF3R (ENSCHIG00000006768) #30 GRIK3 (ENSCHIG00000021730) #31 ZC3H12A (ENSCHIG00000021957) #32 MEAF6 (ENSCHIG00000002979) SNIP1 (ENSCHIG00000013452) #20 DNALI1 (ENSCHIG00000007466) #19 GNL2 (ENSCHIG00000015731) #18 RSPO1 (ENSCHIG00000023675) #17 Bovinae ANCESTRAL SPECIES 1 ENSGT00940000159550 ENSGT00940000157613 ENSGT00390000013601 ENSGT00950000182848.c.b.b.a ENSGT00640000091536 ENSGT00390000001867 ENSGT00390000012738 ENSGT00940000158729 ENSGT00940000158568 ENSGT00940000155256 ENSGT00390000012030.a ENSGT00950000182894.D ENSGT00390000015369 ENSGT00940000154317.a.a ENSGT00390000003880.b.a ENSGT00950000182941.a.a.b #22 ENSGT00950000183163.a.a #23 ENSGT00940000160627 #24 ENSGT00940000154096.b.b.b.b.a ##25 ENSGT00950000182986.b #26 ENSGT00510000048364 ENSGT00390000004808 #27 ENSGT00390000001737 #29 ENSGT00940000158915 #30 ENSGT00940000159465 #31 ENSGT00940000155107.a.a #32 ENSGT00390000015257 ENSGT00940000156553 #20 ENSGT00390000003012 #19 ENSGT00810000125524 #18 ENSGT00940000158871 #17 Bos ANCESTRAL SPECIES ENSGT00940000159550 ENSGT00940000157613 ENSGT00390000013601 ENSGT00950000182848.c.b.b.a ENSGT00640000091536 ENSGT00390000001867 ENSGT00390000012738 ENSGT00940000158729 ENSGT00940000158568 ENSGT00940000155256 ENSGT00390000012030.a ENSGT00950000182894.D ENSGT00390000015369 ENSGT00940000154317.a.a ENSGT00390000003880.b.a ENSGT00950000182941.a.a.b #22 ENSGT00950000183163.a.a #23 ENSGT00940000160627 #24 ENSGT00940000154096.b.b.b.b.a ##25 ENSGT00950000182986.b #26 ENSGT00510000048364 ENSGT00390000004808 #27 ENSGT00390000001737 #29 ENSGT00940000158915 #30 ENSGT00940000159465 #31 ENSGT00940000155107.a.a #32 ENSGT00390000015257 ENSGT00940000156553 #20 ENSGT00390000003012 #19 ENSGT00810000125524 #18 ENSGT00940000158871 #17 Bos_a ANCESTRAL SPECIES 1 ENSGT00940000159550 ENSGT00940000157613 ENSGT00390000013601 ENSGT00950000182848.c.b.b.a ENSGT00640000091536 ENSGT00390000001867 ENSGT00390000012738 ENSGT00940000158729 ENSGT00940000158568 ENSGT00940000155256 ENSGT00390000012030.a ENSGT00950000182894.D ENSGT00390000015369 ENSGT00940000154317.a.a ENSGT00390000003880.b.a ENSGT00950000182941.a.a.b #22 ENSGT00950000183163.a.a #23 ENSGT00940000160627 #24 ENSGT00940000154096.b.b.b.b.a ##25 ENSGT00950000182986.b #26 ENSGT00510000048364 ENSGT00390000004808 #27 ENSGT00390000001737 #29 ENSGT00940000158915 #30 ENSGT00940000159465 #31 ENSGT00940000155107.a.a #32 ENSGT00940000156553 #20 ENSGT00390000003012 #19 ENSGT00810000125524 #18 ENSGT00940000158871 #17 ENSGT00390000008551 Domestic yak MODERN SPECIES 22 KIAA0319L (ENSBGRG00000011159) NCDN (ENSBGRG00000010990) TFAP2E (ENSBGRG00000010881) PSMB2 (ENSBGRG00000010708) C1orf216 (ENSBGRG00000010647) CLSPN (ENSBGRG00000010482) ENSBGRG00000010448 AGO1 (ENSBGRG00000010203) ENSBGRG00000010165 AGO4 (ENSBGRG00000009562) ENSBGRG00000009506 TEKT2 (ENSBGRG00000009332) ADPRS (ENSBGRG00000009212) COL8A2 (ENSBGRG00000009153) TRAPPC3 (ENSBGRG00000009085) MAP7D1 (ENSBGRG00000008399) #22 ENSBGRG00000008330 THRAP3 (ENSBGRG00000008220) #23 SH3D21 (ENSBGRG00000008077) #24 ENSBGRG00000008041 ##25 STK40 (ENSBGRG00000007897) #26 LSM10 (ENSBGRG00000007878) OSCP1 (ENSBGRG00000007695) #27 CSF3R (ENSBGRG00000007254) #30 ENSBGRG00000007155 GRIK3 (ENSBGRG00000006888) #31 ZC3H12A (ENSBGRG00000006725) #32 SNIP1 (ENSBGRG00000006583) #20 DNALI1 (ENSBGRG00000006531) #19 GNL2 (ENSBGRG00000006437) #18 RSPO1 (ENSBGRG00000006342) #17 Wild yak MODERN SPECIES 504 NCDN (ENSBMUG00000021543) TFAP2E (ENSBMUG00000021558) PSMB2 (ENSBMUG00000021571) ENSBMUG00000021576 C1orf216 (ENSBMUG00000021588) CLSPN (ENSBMUG00000021706) AGO4 (ENSBMUG00000021730) AGO1 (ENSBMUG00000021749) AGO3 (ENSBMUG00000021761) ENSBMUG00000021797 ENSBMUG00000021805 TEKT2 (ENSBMUG00000021822) ADPRS (ENSBMUG00000021835) COL8A2 (ENSBMUG00000021845) TRAPPC3 (ENSBMUG00000021877) MAP7D1 (ENSBMUG00000021965) #22 THRAP3 (ENSBMUG00000022036) #23 SH3D21 (ENSBMUG00000022061) #24 EVA1B (ENSBMUG00000022076) ##25 STK40 (ENSBMUG00000022119) #26 LSM10 (ENSBMUG00000022140) NPHP4 (ENSBMUG00000000118) KCNAB2 (ENSBMUG00000000324) CHD5 (ENSBMUG00000000423) RPL22 (ENSBMUG00000000473) RNF207 (ENSBMUG00000000544) ICMT (ENSBMUG00000000568) GPR153 (ENSBMUG00000000578) ACOT7 (ENSBMUG00000000671) ENSBMUG00000000699 ENSBMUG00000000714 Bos_b ANCESTRAL SPECIES 1 ENSGT00940000159550 ENSGT00940000157613 ENSGT00390000013601 ENSGT00950000182848.c.b.b.a ENSGT00640000091536 ENSGT00390000001867 ENSGT00390000012738 ENSGT00940000158729 ENSGT00940000158568 ENSGT00940000155256 ENSGT00390000012030.a ENSGT00950000182894.D ENSGT00390000015369 ENSGT00940000154317.a.a ENSGT00390000003880.b.a ENSGT00950000182941.a.a.b #22 ENSGT00950000183163.a.a #23 ENSGT00940000160627 #24 ENSGT00940000154096.b.b.b.b.a ##25 ENSGT00950000182986.b #26 ENSGT00510000048364 ENSGT00390000004808 #27 ENSGT00390000001737 #29 ENSGT00940000158915 #30 ENSGT00940000159465 #31 ENSGT00940000155107.a.a #32 ENSGT00390000015257 ENSGT00940000156553 #20 ENSGT00390000003012 #19 ENSGT00810000125524 #18 ENSGT00940000158871 #17 Cow MODERN SPECIES 22 ZMYM4 (ENSBTAG00000021023) KIAA0319L (ENSBTAG00000016694) NCDN (ENSBTAG00000016696) TFAP2E (ENSBTAG00000001959) PSMB2 (ENSBTAG00000002377) C3H1orf216 (ENSBTAG00000038292) CLSPN (ENSBTAG00000002826) AGO4 (ENSBTAG00000015220) AGO1 (ENSBTAG00000012253) AGO3 (ENSBTAG00000018324) ENSBTAG00000055249 TEKT2 (ENSBTAG00000021714) ADPRS (ENSBTAG00000021715) COL8A2 (ENSBTAG00000010175) TRAPPC3 (ENSBTAG00000005732) MAP7D1 (ENSBTAG00000030301) #22 THRAP3 (ENSBTAG00000024095) #23 SH3D21 (ENSBTAG00000038617) #24 EVA1B (ENSBTAG00000014358) ##25 STK40 (ENSBTAG00000015969) #26 LSM10 (ENSBTAG00000024096) OSCP1 (ENSBTAG00000007994) #27 MRPS15 (ENSBTAG00000024097) #29 CSF3R (ENSBTAG00000013334) #30 GRIK3 (ENSBTAG00000009269) #31 ZC3H12A (ENSBTAG00000011316) #32 MEAF6 (ENSBTAG00000010506) SNIP1 (ENSBTAG00000016852) #20 DNALI1 (ENSBTAG00000002583) #19 GNL2 (ENSBTAG00000003849) #18 RSPO1 (ENSBTAG00000003837) #17 Hybrid Bos Indicus MODERN SPECIES 22 NCDN (ENSBIXG00005026659) KIAA0319L (ENSBIXG00005026746) TFAP2E (ENSBIXG00005026820) PSMB2 (ENSBIXG00005026844) C1orf216 (ENSBIXG00005026857) CLSPN (ENSBIXG00005004592) ENSBIXG00005026903 ENSBIXG00005026911 AGO1 (ENSBIXG00005026944) ENSBIXG00005026966 AGO3 (ENSBIXG00005027246) ENSBIXG00005005614 TEKT2 (ENSBIXG00005027402) COL8A2 (ENSBIXG00005027444) TRAPPC3 (ENSBIXG00005007591) MAP7D1 (ENSBIXG00005027608) #22 THRAP3 (ENSBIXG00005027648) #23 ENSBIXG00005004754 #24 EVA1B (ENSBIXG00005027691) ##25 STK40 (ENSBIXG00005027735) #26 LSM10 (ENSBIXG00005027748) OSCP1 (ENSBIXG00005027790) #27 MRPS15 (ENSBIXG00005027828) #29 CSF3R (ENSBIXG00005027869) #30 GRIK3 (ENSBIXG00005027987) #31 ZC3H12A (ENSBIXG00005028023) #32 SNIP1 (ENSBIXG00005028139) #20 DNALI1 (ENSBIXG00005028180) #19 GNL2 (ENSBIXG00005028205) #18 RSPO1 (ENSBIXG00005028242) #17 C1orf109 (ENSBIXG00005028256) American bison MODERN SPECIES 3081 ZMYM4 (ENSBBBG00000021494) KIAA0319L (ENSBBBG00000008471) NCDN (ENSBBBG00000021563) ENSBBBG00000021575 PSMB2 (ENSBBBG00000021588) C1orf216 (ENSBBBG00000021593) CLSPN (ENSBBBG00000021717) AGO4 (ENSBBBG00000021763) AGO1 (ENSBBBG00000021806) AGO3 (ENSBBBG00000008372) ENSBBBG00000007681 TEKT2 (ENSBBBG00000021903) ADPRS (ENSBBBG00000021910) COL8A2 (ENSBBBG00000021919) TRAPPC3 (ENSBBBG00000021943) MAP7D1 (ENSBBBG00000022091) #22 THRAP3 (ENSBBBG00000022137) #23 ENSBBBG00000022154 #24 EVA1B (ENSBBBG00000007200) ##25 STK40 (ENSBBBG00000022179) #26 LSM10 (ENSBBBG00000022186) OSCP1 (ENSBBBG00000022249) #27 MRPS15 (ENSBBBG00000022276) #29 CSF3R (ENSBBBG00000005872) #30 GRIK3 (ENSBBBG00000022330) #31 Cetacea ANCESTRAL SPECIES ENSGT00940000159550 ENSGT00940000157613 ENSGT00390000013601 ENSGT00950000182848.c.b.b.a ENSGT00640000091536 ENSGT00390000001867 ENSGT00390000012738 ENSGT00940000158729 ENSGT00940000158568 ENSGT00940000155256 ENSGT00390000012030.a ENSGT00950000182894.D ENSGT00390000015369 ENSGT00940000154317.a.a ENSGT00390000003880.b.a ENSGT00950000182941.a.a.b #22 ENSGT00950000183163.a.a #23 ENSGT00990000210150 ENSGT00940000160627 #24 ENSGT00940000154096.b.b.b.b.a ##25 ENSGT00950000182986.b #26 ENSGT00510000048364 ENSGT00390000004808 #27 ENSGT00390000001737.g #29 ENSGT00940000158915 #30 ENSGT00940000159465 #31 ENSGT00940000155107.a.a #32 ENSGT00390000015257 ENSGT00940000156553 #20 ENSGT00390000003012 #19 ENSGT00810000125524 #18 Odontoceti ANCESTRAL SPECIES ENSGT00940000159550 ENSGT00940000157613 ENSGT00390000013601 ENSGT00950000182848.c.b.b.a ENSGT00640000091536 ENSGT00390000001867 ENSGT00390000012738 ENSGT00940000158729 ENSGT00940000158568 ENSGT00940000155256 ENSGT00390000012030.a ENSGT00950000182894.D ENSGT00390000015369 ENSGT00940000154317.a.a ENSGT00390000003880.b.a ENSGT00950000182941.a.a.b #22 ENSGT00950000183163.a.a #23 ENSGT00990000210150 ENSGT00940000160627 #24 ENSGT00940000154096.b.b.b.b.a ##25 ENSGT00950000182986.b #26 ENSGT00510000048364 ENSGT00390000004808 #27 ENSGT00390000001737.g #29 ENSGT00940000158915 #30 ENSGT00940000159465 #31 ENSGT00940000155107.a.a #32 ENSGT00390000015257 ENSGT00940000156553 #20 ENSGT00390000003012 #19 ENSGT00810000125524 #18 Odontoceti_a ANCESTRAL SPECIES ENSGT00940000159550 ENSGT00940000157613 ENSGT00390000013601 ENSGT00950000182848.c.b.b.a ENSGT00640000091536 ENSGT00390000001867 ENSGT00390000012738 ENSGT00940000158729 ENSGT00940000158568 ENSGT00940000155256 ENSGT00390000012030.a ENSGT00950000182894.D ENSGT00390000015369 ENSGT00940000154317.a.a ENSGT00390000003880.b.a ENSGT00950000182941.a.a.b #22 ENSGT00950000183163.a.a #23 ENSGT00990000210150 ENSGT00940000160627 #24 ENSGT00940000154096.b.b.b.b.a ##25 ENSGT00950000182986.b #26 ENSGT00510000048364 ENSGT00390000004808 #27 ENSGT00390000001737.g #29 ENSGT00940000158915 #30 ENSGT00940000159465 #31 ENSGT00940000155107.a.a #32 ENSGT00390000015257 ENSGT00940000156553 #20 ENSGT00390000003012 #19 ENSGT00810000125524 #18 Odontoceti_b ANCESTRAL SPECIES ENSGT00940000159550 ENSGT00940000157613 ENSGT00390000013601 ENSGT00950000182848.c.b.b.a ENSGT00640000091536 ENSGT00390000001867 ENSGT00390000012738 ENSGT00940000158729 ENSGT00940000158568 ENSGT00940000155256 ENSGT00390000012030.a ENSGT00950000182894.D ENSGT00390000015369 ENSGT00940000154317.a.a ENSGT00390000003880.b.a ENSGT00950000182941.a.a.b #22 ENSGT00950000183163.a.a #23 ENSGT00990000210150 ENSGT00940000154096.b.b.b.b.a ##25 ENSGT00950000182986.b #26 ENSGT00510000048364 ENSGT00390000004808 #27 ENSGT00390000001737.g #29 ENSGT00940000158915 #30 ENSGT00940000159465 #31 ENSGT00940000154717.ib ENSGT00940000155107.a.a #32 ENSGT00390000015257 ENSGT00940000156553 #20 ENSGT00390000003012 #19 ENSGT00810000125524 #18 Monodontidae ANCESTRAL SPECIES ENSGT00940000159550 ENSGT00940000157613 ENSGT00390000013601 ENSGT00950000182848.c.b.b.a ENSGT00640000091536 ENSGT00390000001867 ENSGT00390000012738 ENSGT00940000158729 ENSGT00940000158568 ENSGT00940000155256 ENSGT00390000012030.a ENSGT00950000182894.D ENSGT00390000015369 ENSGT00940000154317.a.a ENSGT00390000003880.b.a ENSGT00950000182941.a.a.b #22 ENSGT00950000183163.a.a #23 ENSGT00990000210150 ENSGT00940000154096.b.b.b.b.a ##25 ENSGT00950000182986.b #26 ENSGT00510000048364 ENSGT00390000004808 #27 ENSGT00390000001737.g #29 ENSGT00940000158915 #30 ENSGT00940000159465 #31 ENSGT00940000154717.ib ENSGT00940000155107.a.a #32 ENSGT00390000015257 ENSGT00940000156553 #20 ENSGT00390000003012 #19 ENSGT00810000125524 #18 Beluga whale MODERN SPECIES 74 SFPQ (ENSDLEG00000020526) ZMYM4 (ENSDLEG00000020543) KIAA0319L (ENSDLEG00000020588) NCDN (ENSDLEG00000020601) TFAP2E (ENSDLEG00000020609) PSMB2 (ENSDLEG00000020616) CUNH1orf216 (ENSDLEG00000020623) CLSPN (ENSDLEG00000020638) AGO4 (ENSDLEG00000020706) AGO1 (ENSDLEG00000020718) AGO3 (ENSDLEG00000020726) ENSDLEG00000020733 TEKT2 (ENSDLEG00000020737) COL8A2 (ENSDLEG00000020743) TRAPPC3 (ENSDLEG00000020746) MAP7D1 (ENSDLEG00000020755) #22 THRAP3 (ENSDLEG00000020766) #23 ENSDLEG00000020772 EVA1B (ENSDLEG00000020774) ##25 STK40 (ENSDLEG00000020778) #26 LSM10 (ENSDLEG00000020785) OSCP1 (ENSDLEG00000020789) #27 ENSDLEG00000020797 #29 CSF3R (ENSDLEG00000020804) #30 GRIK3 (ENSDLEG00000020811) #31 ENSDLEG00000020819 ZC3H12A (ENSDLEG00000020831) #32 MEAF6 (ENSDLEG00000020839) SNIP1 (ENSDLEG00000020851) #20 DNALI1 (ENSDLEG00000020862) #19 GNL2 (ENSDLEG00000007944) #18 Narwhal MODERN SPECIES 304 ZMYM4 (ENSMMNG00015009519) KIAA0319L (ENSMMNG00015009434) NCDN (ENSMMNG00015009414) TFAP2E (ENSMMNG00015009400) PSMB2 (ENSMMNG00015009386) C1orf216 (ENSMMNG00015009379) CLSPN (ENSMMNG00015009362) AGO1 (ENSMMNG00015009304) AGO4 (ENSMMNG00015009235) ENSMMNG00015009200 ENSMMNG00015009194 TEKT2 (ENSMMNG00015009187) ADPRS (ENSMMNG00015009176) COL8A2 (ENSMMNG00015009172) TRAPPC3 (ENSMMNG00015009162) MAP7D1 (ENSMMNG00015009143) #22 THRAP3 (ENSMMNG00015009123) #23 ENSMMNG00015009102 EVA1B (ENSMMNG00015009093) ##25 STK40 (ENSMMNG00015009085) #26 LSM10 (ENSMMNG00015009078) OSCP1 (ENSMMNG00015009023) #27 MRPS15 (ENSMMNG00015009004) #29 CSF3R (ENSMMNG00015008991) #30 GRIK3 (ENSMMNG00015008981) #31 ZC3H12A (ENSMMNG00015008939) #32 MEAF6 (ENSMMNG00015008912) SNIP1 (ENSMMNG00015008842) #20 DNALI1 (ENSMMNG00015008824) #19 GNL2 (ENSMMNG00015008807) #18 RSPO1 (ENSMMNG00015008781) #17 Vaquita MODERN SPECIES ZMYM4 (ENSPSNG00000014647) KIAA0319L (ENSPSNG00000014729) NCDN (ENSPSNG00000014884) TFAP2E (ENSPSNG00000015021) PSMB2 (ENSPSNG00000015130) C1orf216 (ENSPSNG00000015213) CLSPN (ENSPSNG00000015267) AGO4 (ENSPSNG00000015400) AGO1 (ENSPSNG00000015633) AGO3 (ENSPSNG00000015767) ENSPSNG00000015925 TEKT2 (ENSPSNG00000016008) ADPRS (ENSPSNG00000016066) COL8A2 (ENSPSNG00000016120) TRAPPC3 (ENSPSNG00000016166) MAP7D1 (ENSPSNG00000016291) #22 THRAP3 (ENSPSNG00000016451) #23 ENSPSNG00000016520 EVA1B (ENSPSNG00000016616) ##25 STK40 (ENSPSNG00000016665) #26 LSM10 (ENSPSNG00000016792) OSCP1 (ENSPSNG00000016833) #27 ENSPSNG00000017018 #29 CSF3R (ENSPSNG00000017067) #30 GRIK3 (ENSPSNG00000017499) #31 ENSPSNG00000017843 ZC3H12A (ENSPSNG00000017941) #32 MEAF6 (ENSPSNG00000018028) SNIP1 (ENSPSNG00000018177) #20 DNALI1 (ENSPSNG00000018223) #19 GNL2 (ENSPSNG00000018313) #18 Dolphin MODERN SPECIES 740 CLSPN (ENSTTRG00000015081) AGO4 (ENSTTRG00000015086) AGO1 (ENSTTRG00000015088) AGO3 (ENSTTRG00000015092) TEKT2 (ENSTTRG00000015093) ADPRS (ENSTTRG00000015096) COL8A2 (ENSTTRG00000015097) TRAPPC3 (ENSTTRG00000015098) MAP7D1 (ENSTTRG00000015100) #22 THRAP3 (ENSTTRG00000015101) #23 Sperm whale MODERN SPECIES 192 TRAPPC3 (ENSPCTG00005019743) MAP7D1 (ENSPCTG00005019665) #22 Blue whale MODERN SPECIES ZMYM4 (ENSBMSG00010000862) KIAA0319L (ENSBMSG00010000897) NCDN (ENSBMSG00010000921) TFAP2E (ENSBMSG00010000953) PSMB2 (ENSBMSG00010000988) C1orf216 (ENSBMSG00010001008) CLSPN (ENSBMSG00010001054) AGO4 (ENSBMSG00010001125) AGO1 (ENSBMSG00010001153) AGO3 (ENSBMSG00010001203) ENSBMSG00010001236 TEKT2 (ENSBMSG00010001253) ADPRS (ENSBMSG00010001262) COL8A2 (ENSBMSG00010001272) TRAPPC3 (ENSBMSG00010001294) MAP7D1 (ENSBMSG00010001348) #22 THRAP3 (ENSBMSG00010001398) #23 EVA1B (ENSBMSG00010001412) ##25 STK40 (ENSBMSG00010001425) #26 ENSBMSG00010001447 OSCP1 (ENSBMSG00010001473) #27 MRPS15 (ENSBMSG00010001557) #29 CSF3R (ENSBMSG00010001575) #30 GRIK3 (ENSBMSG00010001634) #31 ZC3H12A (ENSBMSG00010001681) #32 ENSBMSG00010001718 SNIP1 (ENSBMSG00010001754) #20 DNALI1 (ENSBMSG00010001767) #19 GNL2 (ENSBMSG00010001802) #18 RSPO1 (ENSBMSG00010001901) #17 C1orf109 (ENSBMSG00010001923) Camelidae ANCESTRAL SPECIES 3 ENSGT00940000157337 ENSGT00940000156221 ENSGT00940000159550 ENSGT00940000157613 ENSGT00390000013601 ENSGT00640000091536 ENSGT00390000012738 ENSGT00940000158729 ENSGT00940000158568 ENSGT00940000155256 ENSGT00390000012030.a ENSGT00950000182894.D ENSGT00390000015369 ENSGT00940000154317.a.a ENSGT00390000003880.b.a ENSGT00950000182941.a.a.b #22 ENSGT00950000183163.a.a #23 ENSGT00940000160627 #24 ENSGT00940000154096.b.b.b.b.a ##25 ENSGT00950000182986.b #26 ENSGT00510000048364 ENSGT00390000004808 #27 ENSGT00390000001737 #29 ENSGT00940000158915 #30 ENSGT00940000159465 #31 ENSGT00940000155107.a.a #32 ENSGT00390000015257 ENSGT00940000156553 #20 ENSGT00390000003012 #19 ENSGT00810000125524 #18 ENSGT00940000158871 #17 Arabian camel MODERN SPECIES 4 ZMYM1 (ENSCDRG00005021216) SFPQ (ENSCDRG00005021228) ZMYM4 (ENSCDRG00005021241) KIAA0319L (ENSCDRG00005021261) NCDN (ENSCDRG00005021273) PSMB2 (ENSCDRG00005021286) CLSPN (ENSCDRG00005021303) AGO4 (ENSCDRG00005021335) AGO1 (ENSCDRG00005006649) AGO3 (ENSCDRG00005006758) ENSCDRG00005006892 TEKT2 (ENSCDRG00005007020) ADPRS (ENSCDRG00005007072) COL8A2 (ENSCDRG00005007112) TRAPPC3 (ENSCDRG00005007149) MAP7D1 (ENSCDRG00005007249) #22 THRAP3 (ENSCDRG00005008001) #23 ENSCDRG00005008118 #24 EVA1B (ENSCDRG00005008175) ##25 STK40 (ENSCDRG00005008254) #26 LSM10 (ENSCDRG00005008343) OSCP1 (ENSCDRG00005008387) #27 MRPS15 (ENSCDRG00005008579) #29 CSF3R (ENSCDRG00005008687) #30 GRIK3 (ENSCDRG00005008818) #31 ZC3H12A (ENSCDRG00005008948) #32 MEAF6 (ENSCDRG00005009070) SNIP1 (ENSCDRG00005009364) #20 DNALI1 (ENSCDRG00005009434) #19 GNL2 (ENSCDRG00005009550) #18 RSPO1 (ENSCDRG00005009641) #17 Eulipotyphla ANCESTRAL SPECIES 1643 ENSGT00390000003880.b.a ENSGT00950000182941.a.a.b #22 Hedgehog MODERN SPECIES 1853 MAP7D1 (ENSEEUG00000005074) #22 Common shrew MODERN SPECIES 2756 TRAPPC3 (ENSSARG00000013968) MAP7D1 (ENSSARG00000013974) #22 Euarchontoglires ANCESTRAL SPECIES ENSGT00940000157613 ENSGT00940000168628 ENSGT00390000013601 ENSGT00950000182848.c.b.b.a ENSGT00640000091536 ENSGT00390000001867 ENSGT00390000012738 ENSGT00940000158729 ENSGT00940000158568 ENSGT00940000155256 ENSGT00390000012030.a ENSGT00950000182894.D ENSGT00390000015369 ENSGT00940000154317.a.a ENSGT00390000003880.b.a ENSGT00950000182941.a.a.b #22 ENSGT00950000183163.a.a #23 ENSGT00940000160627 #24 ENSGT00940000154096.b.b.b.b.a ##25 ENSGT00950000182986.b #26 ENSGT00510000048364 ENSGT00390000004808 #27 ENSGT00390000001737 #29 ENSGT00940000158915 #30 ENSGT00940000159465 #31 ENSGT00940000155107.a.a #32 ENSGT00390000015257 ENSGT00940000156553 #20 ENSGT00390000003012 #19 ENSGT00810000125524 #18 ENSGT00940000158871 #17 Primates ANCESTRAL SPECIES 4 ENSGT00940000159550 ENSGT00940000157613 ENSGT00390000013601 ENSGT00950000182848.c.b.b.a ENSGT00640000091536 ENSGT00390000001867 ENSGT00390000012738 ENSGT00940000158729 ENSGT00940000158568 ENSGT00940000155256 ENSGT00390000012030.a ENSGT00950000182894.D ENSGT00390000015369 ENSGT00940000154317.a.a ENSGT00390000003880.b.a ENSGT00950000182941.a.a.b #22 ENSGT00950000183163.a.a #23 ENSGT00940000160627 #24 ENSGT00940000154096.b.b.b.b.a ##25 ENSGT00950000182986.b #26 ENSGT00510000048364 ENSGT00390000004808 #27 ENSGT00390000001737 #29 ENSGT00940000158915 #30 ENSGT00940000159465 #31 ENSGT00940000155107.a.a #32 ENSGT00390000015257 ENSGT00940000156553 #20 ENSGT00390000003012 #19 ENSGT00810000125524 #18 ENSGT00940000158871 #17 Haplorrhini ANCESTRAL SPECIES 1 ENSGT00940000159550 ENSGT00940000157613 ENSGT00390000013601 ENSGT00950000182848.c.b.b.a ENSGT00640000091536 ENSGT00390000001867 ENSGT00390000012738 ENSGT00940000158729 ENSGT00940000158568 ENSGT00940000155256 ENSGT00390000012030.a ENSGT00950000182894.D ENSGT00390000015369 ENSGT00940000154317.a.a ENSGT00390000003880.b.a ENSGT00950000182941.a.a.b #22 ENSGT00950000183163.a.a #23 ENSGT00940000160627 #24 ENSGT00940000154096.b.b.b.b.a ##25 ENSGT00950000182986.b #26 ENSGT00510000048364 ENSGT00390000004808 #27 ENSGT00390000001737 #29 ENSGT00940000158915 #30 ENSGT00940000159465 #31 ENSGT00940000155107.a.a #32 ENSGT00390000015257 ENSGT00940000156553 #20 ENSGT00390000003012 #19 ENSGT00810000125524 #18 ENSGT00940000158871 #17 Simiiformes ANCESTRAL SPECIES 3 ENSGT00940000159550 ENSGT00940000157613 ENSGT00390000013601 ENSGT00950000182848.c.b.b.a ENSGT00640000091536 ENSGT00390000001867 ENSGT00390000012738 ENSGT00940000158729 ENSGT00940000158568 ENSGT00940000155256 ENSGT00390000012030.a ENSGT00950000182894.D ENSGT00390000015369 ENSGT00940000154317.a.a ENSGT00390000003880.b.a ENSGT00950000182941.a.a.b #22 ENSGT00950000183163.a.a #23 ENSGT00940000160627 #24 ENSGT00940000154096.b.b.b.b.a ##25 ENSGT00950000182986.b #26 ENSGT00510000048364 ENSGT00390000004808 #27 ENSGT00390000001737 #29 ENSGT00940000158915 #30 ENSGT00940000159465 #31 ENSGT00940000155107.a.a #32 ENSGT00390000015257 ENSGT00940000156553 #20 ENSGT00390000003012 #19 ENSGT00810000125524 #18 ENSGT00940000158871 #17 Catarrhini ANCESTRAL SPECIES 3 ENSGT00940000159550 ENSGT00940000157613 ENSGT00390000013601 ENSGT00950000182848.c.b.b.a ENSGT00640000091536 ENSGT00390000001867 ENSGT00390000012738 ENSGT00940000158729 ENSGT00940000158568 ENSGT00940000155256 ENSGT00390000012030.a ENSGT00950000182894.D ENSGT00390000015369 ENSGT00940000154317.a.a ENSGT00390000003880.b.a ENSGT00950000182941.a.a.b #22 ENSGT00950000183163.a.a #23 ENSGT00940000160627 #24 ENSGT00940000154096.b.b.b.b.a ##25 ENSGT00950000182986.b #26 ENSGT00510000048364 ENSGT00390000004808 #27 ENSGT00390000001737 #29 ENSGT00940000158915 #30 ENSGT00940000159465 #31 ENSGT00940000155107.a.a #32 ENSGT00390000015257.t ENSGT00940000156553 #20 ENSGT00390000003012 #19 ENSGT00810000125524 #18 ENSGT00940000158871 #17 Hominoidea ANCESTRAL SPECIES 3 ENSGT00940000159550 ENSGT00940000157613 ENSGT00390000013601 ENSGT00950000182848.c.b.b.a ENSGT00640000091536 ENSGT00390000001867 ENSGT00390000012738 ENSGT00940000158729 ENSGT00940000158568 ENSGT00940000155256 ENSGT00390000012030.a ENSGT00950000182894.D ENSGT00390000015369 ENSGT00940000154317.a.a ENSGT00390000003880.b.a ENSGT00950000182941.a.a.b #22 ENSGT00950000183163.a.a #23 ENSGT00940000160627 #24 ENSGT00940000154096.b.b.b.b.a ##25 ENSGT00950000182986.b #26 ENSGT00510000048364 ENSGT00390000004808 #27 ENSGT00390000001737 #29 ENSGT00940000158915 #30 ENSGT00940000159465 #31 ENSGT00940000155107.a.a #32 ENSGT00390000015257.t ENSGT00940000156553 #20 ENSGT00390000003012 #19 ENSGT00810000125524 #18 ENSGT00940000158871 #17 Gibbon MODERN SPECIES 2 ENSNLEG00000018998 ENSNLEG00000031618 KIAA0319L (ENSNLEG00000011001) NCDN (ENSNLEG00000011043) TFAP2E (ENSNLEG00000011088) PSMB2 (ENSNLEG00000034792) C1orf216 (ENSNLEG00000035826) CLSPN (ENSNLEG00000011110) AGO4 (ENSNLEG00000011125) AGO1 (ENSNLEG00000011181) AGO3 (ENSNLEG00000027092) TEKT2 (ENSNLEG00000011235) ADPRS (ENSNLEG00000011265) ENSNLEG00000011300 TRAPPC3 (ENSNLEG00000031818) ENSNLEG00000011317 #22 THRAP3 (ENSNLEG00000011359) #23 SH3D21 (ENSNLEG00000011391) #24 EVA1B (ENSNLEG00000030121) ##25 STK40 (ENSNLEG00000011406) #26 LSM10 (ENSNLEG00000033754) OSCP1 (ENSNLEG00000011442) #27 MRPS15 (ENSNLEG00000030022) #29 CSF3R (ENSNLEG00000011482) #30 GRIK3 (ENSNLEG00000011524) #31 ZC3H12A (ENSNLEG00000011545) #32 MEAF6 (ENSNLEG00000011546) SNIP1 (ENSNLEG00000011577) #20 DNALI1 (ENSNLEG00000011584) #19 GNL2 (ENSNLEG00000011599) #18 RSPO1 (ENSNLEG00000011628) #17 Hominidae ANCESTRAL SPECIES 3 ENSGT00940000159550 ENSGT00940000157613 ENSGT00390000013601 ENSGT00950000182848.c.b.b.a ENSGT00640000091536 ENSGT00390000001867 ENSGT00390000012738 ENSGT00940000158729 ENSGT00940000158568 ENSGT00940000155256 ENSGT00390000012030.a ENSGT00950000182894.D ENSGT00390000015369 ENSGT00940000154317.a.a ENSGT00390000003880.b.a ENSGT00950000182941.a.a.b #22 ENSGT00950000183163.a.a #23 ENSGT00940000160627 #24 ENSGT00940000154096.b.b.b.b.a ##25 ENSGT00950000182986.b #26 ENSGT00510000048364 ENSGT00390000004808 #27 ENSGT00390000001737 #29 ENSGT00940000158915 #30 ENSGT00940000159465 #31 ENSGT00940000155107.a.a #32 ENSGT00390000015257.t ENSGT00940000156553 #20 ENSGT00950000182891.a.a.b.a.a.a.b.a.b.a ENSGT00390000003012 #19 ENSGT00810000125524 #18 Orangutan MODERN SPECIES ZMYM4 (ENSPPYG00000001559) KIAA0319L (ENSPPYG00000001558) NCDN (ENSPPYG00000001557) TFAP2E (ENSPPYG00000001556) PSMB2 (ENSPPYG00000001555) C1orf216 (ENSPPYG00000001554) CLSPN (ENSPPYG00000001553) AGO4 (ENSPPYG00000001552) AGO1 (ENSPPYG00000001551) AGO3 (ENSPPYG00000001550) ENSPPYG00000040273 TEKT2 (ENSPPYG00000001549) ADPRS (ENSPPYG00000001548) COL8A2 (ENSPPYG00000001547) TRAPPC3 (ENSPPYG00000001546) MAP7D1 (ENSPPYG00000001545) #22 THRAP3 (ENSPPYG00000001544) #23 SH3D21 (ENSPPYG00000001543) #24 EVA1B (ENSPPYG00000030005) ##25 STK40 (ENSPPYG00000001540) #26 LSM10 (ENSPPYG00000001539) OSCP1 (ENSPPYG00000001538) #27 MRPS15 (ENSPPYG00000001537) #29 CSF3R (ENSPPYG00000001536) #30 GRIK3 (ENSPPYG00000001535) #31 ZC3H12A (ENSPPYG00000001534) #32 MEAF6 (ENSPPYG00000034713) SNIP1 (ENSPPYG00000001532) #20 ENSPPYG00000001531 DNALI1 (ENSPPYG00000001530) #19 GNL2 (ENSPPYG00000001529) #18 Homo/Pan/Gorilla group ANCESTRAL SPECIES 3 ENSGT00940000159550 ENSGT00940000157613 ENSGT00390000013601 ENSGT00950000182848.c.b.b.a ENSGT00640000091536 ENSGT00390000001867 ENSGT00390000012738 ENSGT00940000158729 ENSGT00940000158568 ENSGT00940000155256 ENSGT00390000012030.a ENSGT00950000182894.D ENSGT00390000015369 ENSGT00940000154317.a.a ENSGT00390000003880.b.a ENSGT00950000182941.a.a.b #22 ENSGT00950000183163.a.a #23 ENSGT00940000160627 #24 ENSGT00940000154096.b.b.b.b.a ##25 ENSGT00950000182986.b #26 ENSGT00510000048364 ENSGT00390000004808 #27 ENSGT00390000001737 #29 ENSGT00940000158915 #30 ENSGT00940000159465 #31 ENSGT00940000155107.a.a #32 ENSGT00390000015257.t ENSGT00940000156553 #20 ENSGT00950000182891.a.a.b.a.a.a.b.a.b.a ENSGT00390000003012 #19 ENSGT00810000125524 #18 Gorilla MODERN SPECIES ENSGGOG00000023775 KIAA0319L (ENSGGOG00000012068) NCDN (ENSGGOG00000009754) TFAP2E (ENSGGOG00000009762) PSMB2 (ENSGGOG00000009771) C1orf216 (ENSGGOG00000043887) CLSPN (ENSGGOG00000005981) AGO4 (ENSGGOG00000036532) AGO1 (ENSGGOG00000003316) AGO3 (ENSGGOG00000036711) ENSGGOG00000043836 TEKT2 (ENSGGOG00000003766) ADPRS (ENSGGOG00000003770) COL8A2 (ENSGGOG00000003772) TRAPPC3 (ENSGGOG00000004752) MAP7D1 (ENSGGOG00000003219) #22 THRAP3 (ENSGGOG00000006917) #23 SH3D21 (ENSGGOG00000006931) #24 EVA1B (ENSGGOG00000006937) ##25 STK40 (ENSGGOG00000011597) #26 LSM10 (ENSGGOG00000003556) OSCP1 (ENSGGOG00000007041) #27 MRPS15 (ENSGGOG00000013565) #29 CSF3R (ENSGGOG00000013573) #30 GRIK3 (ENSGGOG00000011315) #31 ZC3H12A (ENSGGOG00000009268) #32 MEAF6 (ENSGGOG00000017191) SNIP1 (ENSGGOG00000022697) #20 ENSGGOG00000042544 DNALI1 (ENSGGOG00000007698) #19 GNL2 (ENSGGOG00000007704) #18 Homo/Pan group ANCESTRAL SPECIES 4 ENSGT00950000183210.d.a.c.b.b.a.b.a ENSGT00940000159550 ENSGT00940000157613 ENSGT00390000013601 ENSGT00950000182848.c.b.b.a ENSGT00640000091536 ENSGT00390000001867 ENSGT00390000012738 ENSGT00940000158729 ENSGT00940000158568 ENSGT00940000155256 ENSGT00950000182894.D ENSGT00390000015369 ENSGT00940000154317.a.a ENSGT00390000003880.b.a ENSGT00950000182941.a.a.b #22 ENSGT00950000183163.a.a #23 ENSGT00940000160627 #24 ENSGT00940000154096.b.b.b.b.a ##25 ENSGT00950000182986.b #26 ENSGT00510000048364 ENSGT00390000004808 #27 ENSGT00390000001737 #29 ENSGT00940000158915 #30 ENSGT00940000159465 #31 ENSGT00940000155107.a.a #32 ENSGT00390000015257.t ENSGT00940000156553 #20 ENSGT00950000182891.a.a.b.a.a.a.b.a.b.a ENSGT00390000003012 #19 ENSGT00810000125524 #18 Human MODERN SPECIES SFPQ (ENSG00000116560) ZMYM4 (ENSG00000146463) KIAA0319L (ENSG00000142687) NCDN (ENSG00000020129) TFAP2E (ENSG00000116819) PSMB2 (ENSG00000126067) C1orf216 (ENSG00000142686) CLSPN (ENSG00000092853) AGO4 (ENSG00000134698) AGO1 (ENSG00000092847) AGO3 (ENSG00000126070) TEKT2 (ENSG00000092850) ADPRS (ENSG00000116863) COL8A2 (ENSG00000171812) TRAPPC3 (ENSG00000054116) MAP7D1 (ENSG00000116871) #22 THRAP3 (ENSG00000054118) #23 SH3D21 (ENSG00000214193) #24 EVA1B (ENSG00000142694) ##25 STK40 (ENSG00000196182) #26 LSM10 (ENSG00000181817) OSCP1 (ENSG00000116885) #27 MRPS15 (ENSG00000116898) #29 CSF3R (ENSG00000119535) #30 GRIK3 (ENSG00000163873) #31 ZC3H12A (ENSG00000163874) #32 MEAF6 (ENSG00000163875) SNIP1 (ENSG00000163877) #20 DNALI1 (ENSG00000163879) #19 GNL2 (ENSG00000134697) #18 RSPO1 (ENSG00000169218) #17 Pan ANCESTRAL SPECIES ENSGT00950000183210.d.a.c.b.b.a.b.a ENSGT00940000159550 ENSGT00940000157613 ENSGT00390000013601 ENSGT00950000182848.c.b.b.a ENSGT00640000091536 ENSGT00390000001867 ENSGT00390000012738 ENSGT00940000158729 ENSGT00940000158568 ENSGT00940000155256 ENSGT00950000182894.D ENSGT00390000015369 ENSGT00940000154317.a.a ENSGT00390000003880.b.a ENSGT00950000182941.a.a.b #22 ENSGT00950000183163.a.a #23 ENSGT00940000160627 #24 ENSGT00940000154096.b.b.b.b.a ##25 ENSGT00950000182986.b #26 ENSGT00510000048364 ENSGT00390000004808 #27 ENSGT00390000001737 #29 ENSGT00940000158915 #30 ENSGT00940000159465 #31 ENSGT00940000155107.a.a #32 ENSGT00390000015257.t ENSGT00940000156553 #20 ENSGT00950000182891.a.a.b.a.a.a.b.a.b.a ENSGT00390000003012 #19 ENSGT00810000125524 #18 Bonobo MODERN SPECIES ZMYM4 (ENSPPAG00000031498) ENSPPAG00000043691 KIAA0319L (ENSPPAG00000033357) NCDN (ENSPPAG00000040334) TFAP2E (ENSPPAG00000039587) PSMB2 (ENSPPAG00000043554) C1orf216 (ENSPPAG00000004841) CLSPN (ENSPPAG00000029163) AGO4 (ENSPPAG00000031752) AGO1 (ENSPPAG00000034838) AGO3 (ENSPPAG00000031959) TEKT2 (ENSPPAG00000032256) ADPRS (ENSPPAG00000041931) COL8A2 (ENSPPAG00000031750) TRAPPC3 (ENSPPAG00000041117) MAP7D1 (ENSPPAG00000039211) #22 THRAP3 (ENSPPAG00000028961) #23 SH3D21 (ENSPPAG00000028393) #24 EVA1B (ENSPPAG00000028458) ##25 STK40 (ENSPPAG00000038002) #26 LSM10 (ENSPPAG00000023465) OSCP1 (ENSPPAG00000032111) #27 MRPS15 (ENSPPAG00000025884) #29 CSF3R (ENSPPAG00000037401) #30 GRIK3 (ENSPPAG00000029669) #31 ZC3H12A (ENSPPAG00000041054) #32 MEAF6 (ENSPPAG00000028352) SNIP1 (ENSPPAG00000039865) #20 ENSPPAG00000001093 DNALI1 (ENSPPAG00000032274) #19 GNL2 (ENSPPAG00000001559) #18 Chimpanzee MODERN SPECIES SFPQ (ENSPTRG00000000518) ZMYM4 (ENSPTRG00000000519) KIAA0319L (ENSPTRG00000000521) NCDN (ENSPTRG00000000522) TFAP2E (ENSPTRG00000000523) PSMB2 (ENSPTRG00000000524) C1H1orf216 (ENSPTRG00000052130) CLSPN (ENSPTRG00000000526) AGO4 (ENSPTRG00000000527) AGO1 (ENSPTRG00000000528) AGO3 (ENSPTRG00000000529) TEKT2 (ENSPTRG00000024371) ADPRS (ENSPTRG00000000531) COL8A2 (ENSPTRG00000000532) TRAPPC3 (ENSPTRG00000000533) MAP7D1 (ENSPTRG00000000534) #22 THRAP3 (ENSPTRG00000000535) #23 SH3D21 (ENSPTRG00000034515) #24 EVA1B (ENSPTRG00000000537) ##25 STK40 (ENSPTRG00000000538) #26 LSM10 (ENSPTRG00000000539) OSCP1 (ENSPTRG00000000540) #27 MRPS15 (ENSPTRG00000000541) #29 CSF3R (ENSPTRG00000000542) #30 GRIK3 (ENSPTRG00000000543) #31 ZC3H12A (ENSPTRG00000000544) #32 MEAF6 (ENSPTRG00000047980) SNIP1 (ENSPTRG00000000547) #20 ENSPTRG00000045895 DNALI1 (ENSPTRG00000000548) #19 GNL2 (ENSPTRG00000000549) #18 Cercopithecidae ANCESTRAL SPECIES 2 ENSGT00940000159550 ENSGT00940000157613 ENSGT00390000013601 ENSGT00950000182848.c.b.b.a ENSGT00640000091536 ENSGT00390000001867 ENSGT00390000012738 ENSGT00940000158729 ENSGT00940000158568 ENSGT00940000155256 ENSGT00390000012030.a ENSGT00950000182894.D ENSGT00390000015369 ENSGT00940000154317.a.a ENSGT00390000003880.b.a ENSGT00950000182941.a.a.b #22 ENSGT00950000183163.a.a #23 ENSGT00940000160627 #24 ENSGT00940000154096.b.b.b.b.a ##25 ENSGT00950000182986.b #26 ENSGT00510000048364 ENSGT00390000004808 #27 ENSGT00390000001737 #29 ENSGT00940000158915 #30 ENSGT00940000159465 #31 ENSGT00940000155107.a.a #32 ENSGT00390000015257.t ENSGT00940000156553 #20 ENSGT00390000003012 #19 ENSGT00810000125524 #18 ENSGT00940000158871 #17 Cercopithecinae ANCESTRAL SPECIES ENSGT00940000159550 ENSGT00940000157613 ENSGT00390000013601 ENSGT00950000182848.c.b.b.a ENSGT00640000091536 ENSGT00390000001867 ENSGT00390000012738 ENSGT00940000158729 ENSGT00940000158568 ENSGT00940000155256 ENSGT00390000012030.a ENSGT00950000182894.D ENSGT00390000015369 ENSGT00940000154317.a.a ENSGT00390000003880.b.a ENSGT00950000182941.a.a.b #22 ENSGT00950000183163.a.a #23 ENSGT00940000160627 #24 ENSGT00940000154096.b.b.b.b.a ##25 ENSGT00950000182986.b #26 ENSGT00510000048364 ENSGT00390000004808 #27 ENSGT00390000001737.d #29 ENSGT00940000158915 #30 ENSGT00940000159465 #31 ENSGT00940000155107.a.a #32 ENSGT00390000015257.t ENSGT00940000156553 #20 ENSGT00390000003012 #19 ENSGT00810000125524 #18 ENSGT00940000158871 #17 Vervet Monkey MODERN SPECIES 12 KIAA0319L (ENSCSAG00000001084) NCDN (ENSCSAG00000001085) TFAP2E (ENSCSAG00000001086) PSMB2 (ENSCSAG00000001087) C1orf216 (ENSCSAG00000000132) ENSCSAG00000001088 ENSCSAG00000001089 AGO4 (ENSCSAG00000001090) AGO1 (ENSCSAG00000001091) AGO3 (ENSCSAG00000001092) ENSCSAG00000000133 TEKT2 (ENSCSAG00000001093) ADPRS (ENSCSAG00000001094) COL8A2 (ENSCSAG00000001095) TRAPPC3 (ENSCSAG00000001096) MAP7D1 (ENSCSAG00000001097) #22 THRAP3 (ENSCSAG00000001098) #23 SH3D21 (ENSCSAG00000001100) #24 EVA1B (ENSCSAG00000001099) ##25 STK40 (ENSCSAG00000001101) #26 LSM10 (ENSCSAG00000000134) OSCP1 (ENSCSAG00000001102) #27 MRPS15 (ENSCSAG00000001103) #29 CSF3R (ENSCSAG00000001104) #30 GRIK3 (ENSCSAG00000001105) #31 ZC3H12A (ENSCSAG00000001106) #32 MEAF6 (ENSCSAG00000001107) SNIP1 (ENSCSAG00000001108) #20 DNALI1 (ENSCSAG00000001109) #19 GNL2 (ENSCSAG00000001110) #18 RSPO1 (ENSCSAG00000001111) #17 Cercopithecinae_a ANCESTRAL SPECIES ENSGT00940000159550 ENSGT00940000157613 ENSGT00390000013601 ENSGT00950000182848.c.b.b.a ENSGT00640000091536 ENSGT00390000001867 ENSGT00390000012738 ENSGT00940000158729.d ENSGT00940000158568 ENSGT00940000155256 ENSGT00390000012030.a ENSGT00950000182894.D ENSGT00390000015369 ENSGT00940000154317.a.a ENSGT00390000003880.b.a ENSGT00950000182941.a.a.b #22 ENSGT00950000183163.a.a #23 ENSGT00940000160627 #24 ENSGT00940000154096.b.b.b.b.a ##25 ENSGT00950000182986.b #26 ENSGT00510000048364 ENSGT00390000004808 #27 ENSGT00390000001737.d #29 ENSGT00940000158915 #30 ENSGT00940000159465 #31 ENSGT00940000155107.a.a #32 ENSGT00390000015257.t ENSGT00940000156553 #20 ENSGT00390000003012 #19 ENSGT00810000125524 #18 ENSGT00940000158871 #17 Macaca ANCESTRAL SPECIES ENSGT00940000159550 ENSGT00940000157613 ENSGT00390000013601 ENSGT00950000182848.c.b.b.a ENSGT00640000091536 ENSGT00390000001867 ENSGT00390000012738 ENSGT00940000158729.d ENSGT00940000158568 ENSGT00940000155256 ENSGT00390000012030.a ENSGT00950000182894.D ENSGT00390000015369 ENSGT00940000154317.a.a ENSGT00390000003880.b.a ENSGT00950000182941.a.a.b #22 ENSGT00950000183163.a.a #23 ENSGT00940000160627 #24 ENSGT00940000154096.b.b.b.b.a ##25 ENSGT00950000182986.b #26 ENSGT00510000048364 ENSGT00390000004808 #27 ENSGT00390000001737.c #29 ENSGT00940000158915 #30 ENSGT00940000159465 #31 ENSGT00940000155107.a.a #32 ENSGT00390000015257.t ENSGT00940000156553 #20 ENSGT00390000003012 #19 ENSGT00810000125524 #18 ENSGT00940000158871 #17 Macaca_a ANCESTRAL SPECIES ENSGT00940000159550 ENSGT00940000157613 ENSGT00390000013601 ENSGT00950000182848.c.b.b.a ENSGT00640000091536 ENSGT00390000001867 ENSGT00390000012738 ENSGT00940000158729.c.b ENSGT00940000158729.c.a ENSGT00940000158568 ENSGT00940000155256 ENSGT00950000182894.D ENSGT00390000015369 ENSGT00940000154317.a.a ENSGT00390000003880.b.a ENSGT00950000182941.a.a.b #22 ENSGT00950000183163.a.a #23 ENSGT00940000160627 #24 ENSGT00940000154096.b.b.b.b.a ##25 ENSGT00950000182986.b #26 ENSGT00510000048364 ENSGT00390000004808 #27 ENSGT00390000001737.d #29 ENSGT00940000158915 #30 ENSGT00940000159465 #31 ENSGT00940000155107.a.a #32 ENSGT00390000015257.t ENSGT00940000156553 #20 ENSGT00390000003012 #19 ENSGT00810000125524 #18 ENSGT00940000158871 #17 Rhesus MODERN SPECIES KIAA0319L (ENSMMUG00000019806) NCDN (ENSMMUG00000019812) TFAP2E (ENSMMUG00000019815) PSMB2 (ENSMMUG00000013090) C1H1orf216 (ENSMMUG00000059270) CLSPN (ENSMMUG00000010961) ENSMMUG00000053265 ENSMMUG00000050423 AGO4 (ENSMMUG00000003343) AGO1 (ENSMMUG00000006251) AGO3 (ENSMMUG00000006252) TEKT2 (ENSMMUG00000012028) ADPRS (ENSMMUG00000050632) COL8A2 (ENSMMUG00000012031) TRAPPC3 (ENSMMUG00000022499) MAP7D1 (ENSMMUG00000022500) #22 THRAP3 (ENSMMUG00000014622) #23 SH3D21 (ENSMMUG00000011688) #24 EVA1B (ENSMMUG00000057604) ##25 STK40 (ENSMMUG00000016212) #26 LSM10 (ENSMMUG00000017338) OSCP1 (ENSMMUG00000020432) #27 MRPS15 (ENSMMUG00000020433) #29 CSF3R (ENSMMUG00000020434) #30 ENSMMUG00000053885 GRIK3 (ENSMMUG00000009679) #31 ZC3H12A (ENSMMUG00000010323) #32 MEAF6 (ENSMMUG00000010328) SNIP1 (ENSMMUG00000059855) #20 DNALI1 (ENSMMUG00000008418) #19 GNL2 (ENSMMUG00000008419) #18 Pig-tailed macaque MODERN SPECIES 217 KIAA0319L (ENSMNEG00000034746) ENSMNEG00000042114 NCDN (ENSMNEG00000036209) TFAP2E (ENSMNEG00000026563) PSMB2 (ENSMNEG00000042680) C1orf216 (ENSMNEG00000011640) CLSPN (ENSMNEG00000031665) AGO4 (ENSMNEG00000037723) AGO1 (ENSMNEG00000028881) AGO3 (ENSMNEG00000039518) ENSMNEG00000022567 TEKT2 (ENSMNEG00000034182) ADPRS (ENSMNEG00000038272) COL8A2 (ENSMNEG00000043231) TRAPPC3 (ENSMNEG00000014589) MAP7D1 (ENSMNEG00000035413) #22 THRAP3 (ENSMNEG00000018987) #23 SH3D21 (ENSMNEG00000043158) #24 EVA1B (ENSMNEG00000041849) ##25 STK40 (ENSMNEG00000038686) #26 LSM10 (ENSMNEG00000020023) OSCP1 (ENSMNEG00000043487) #27 MRPS15 (ENSMNEG00000042543) #29 CSF3R (ENSMNEG00000033813) #30 GRIK3 (ENSMNEG00000035057) #31 ZC3H12A (ENSMNEG00000040453) #32 MEAF6 (ENSMNEG00000034129) SNIP1 (ENSMNEG00000004331) #20 DNALI1 (ENSMNEG00000035462) #19 GNL2 (ENSMNEG00000043438) #18 RSPO1 (ENSMNEG00000034664) #17 Cercopithecinae_b ANCESTRAL SPECIES 1 ENSGT00940000159550 ENSGT00940000157613 ENSGT00390000013601 ENSGT00950000182848.c.b.b.a ENSGT00640000091536 ENSGT00390000001867 ENSGT00390000012738 ENSGT00940000158729.d ENSGT00940000158568 ENSGT00940000155256 ENSGT00390000012030.a ENSGT00950000182894.D ENSGT00390000015369 ENSGT00940000154317.a.a ENSGT00390000003880.b.a ENSGT00950000182941.a.a.b #22 ENSGT00950000183163.a.a #23 ENSGT00940000160627 #24 ENSGT00940000154096.b.b.b.b.a ##25 ENSGT00950000182986.b #26 ENSGT00510000048364 ENSGT00390000004808 #27 ENSGT00390000001737.d #29 ENSGT00940000158915 #30 ENSGT00940000159465 #31 ENSGT00940000155107.a.a #32 ENSGT00390000015257.t ENSGT00940000156553 #20 ENSGT00390000003012 #19 ENSGT00810000125524 #18 ENSGT00940000158871 #17 Olive baboon MODERN SPECIES KIAA0319L (ENSPANG00000010535) NCDN (ENSPANG00000017888) TFAP2E (ENSPANG00000004801) PSMB2 (ENSPANG00000007342) ENSPANG00000047679 C1orf216 (ENSPANG00000023261) CLSPN (ENSPANG00000023877) AGO4 (ENSPANG00000007232) AGO1 (ENSPANG00000009060) AGO3 (ENSPANG00000007682) ENSPANG00000032150 TEKT2 (ENSPANG00000010534) ADPRS (ENSPANG00000010533) COL8A2 (ENSPANG00000011822) TRAPPC3 (ENSPANG00000013869) MAP7D1 (ENSPANG00000006397) #22 THRAP3 (ENSPANG00000010532) #23 SH3D21 (ENSPANG00000019295) #24 EVA1B (ENSPANG00000023876) ##25 STK40 (ENSPANG00000026394) #26 LSM10 (ENSPANG00000023172) OSCP1 (ENSPANG00000009801) #27 ENSPANG00000009486 #29 CSF3R (ENSPANG00000004799) #30 ENSPANG00000002642 GRIK3 (ENSPANG00000005822) #31 ZC3H12A (ENSPANG00000011821) #32 MEAF6 (ENSPANG00000023016) SNIP1 (ENSPANG00000016943) #20 DNALI1 (ENSPANG00000025521) #19 GNL2 (ENSPANG00000025285) #18 Cercopithecinae_d ANCESTRAL SPECIES 1 ENSGT00940000159550 ENSGT00940000157613 ENSGT00390000013601 ENSGT00950000182848.c.b.b.a ENSGT00640000091536 ENSGT00390000001867 ENSGT00390000012738 ENSGT00940000158729.d ENSGT00940000158568 ENSGT00940000155256 ENSGT00390000012030.a ENSGT00950000182894.D ENSGT00390000015369 ENSGT00940000154317.a.a ENSGT00390000003880.b.a ENSGT00950000182941.a.a.b #22 ENSGT00950000183163.a.a #23 ENSGT00940000160627 #24 ENSGT00940000154096.b.b.b.b.a ##25 ENSGT00950000182986.b #26 ENSGT00510000048364 ENSGT00390000004808 #27 ENSGT00390000001737.d #29 ENSGT00940000158915 #30 ENSGT00940000159465 #31 ENSGT00940000155107.a.a #32 ENSGT00950000185476 ENSGT00390000015257.t ENSGT00940000156553 #20 ENSGT00390000003012 #19 ENSGT00810000125524 #18 Sooty mangabey MODERN SPECIES 227 ENSCATG00000042306 KIAA0319L (ENSCATG00000043672) NCDN (ENSCATG00000043234) TFAP2E (ENSCATG00000032602) PSMB2 (ENSCATG00000038881) C1orf216 (ENSCATG00000006919) CLSPN (ENSCATG00000044080) AGO4 (ENSCATG00000043421) AGO1 (ENSCATG00000031521) AGO3 (ENSCATG00000029748) ENSCATG00000005617 TEKT2 (ENSCATG00000042764) ADPRS (ENSCATG00000042745) COL8A2 (ENSCATG00000032341) TRAPPC3 (ENSCATG00000041647) MAP7D1 (ENSCATG00000038724) #22 THRAP3 (ENSCATG00000038343) #23 SH3D21 (ENSCATG00000044150) #24 EVA1B (ENSCATG00000039327) ##25 STK40 (ENSCATG00000039453) #26 LSM10 (ENSCATG00000006589) OSCP1 (ENSCATG00000038966) #27 ENSCATG00000044771 #29 CSF3R (ENSCATG00000038990) #30 GRIK3 (ENSCATG00000038812) #31 ZC3H12A (ENSCATG00000037700) #32 ENSCATG00000006010 ENSCATG00000037164 SNIP1 (ENSCATG00000039335) #20 DNALI1 (ENSCATG00000037101) #19 GNL2 (ENSCATG00000026503) #18 Drill MODERN SPECIES 996 AGO4 (ENSMLEG00000039490) AGO1 (ENSMLEG00000038388) AGO3 (ENSMLEG00000027912) ENSMLEG00000006923 TEKT2 (ENSMLEG00000019450) ADPRS (ENSMLEG00000040472) COL8A2 (ENSMLEG00000044213) TRAPPC3 (ENSMLEG00000030351) MAP7D1 (ENSMLEG00000038403) #22 THRAP3 (ENSMLEG00000028924) #23 SH3D21 (ENSMLEG00000021402) #24 STK40 (ENSMLEG00000029415) #26 LSM10 (ENSMLEG00000025150) OSCP1 (ENSMLEG00000018880) #27 ENSMLEG00000040975 #29 CSF3R (ENSMLEG00000039105) #30 GRIK3 (ENSMLEG00000031025) #31 ZC3H12A (ENSMLEG00000034570) #32 ENSMLEG00000021493 Rhinopithecus ANCESTRAL SPECIES 37 ENSGT00950000182960.a.a.a.a.b.rb.v ENSGT00390000015109 ENSGT00390000013601 ENSGT00950000182848.c.b.b.a ENSGT00640000091536 ENSGT00390000001867 ENSGT00390000012738 ENSGT00940000158729 ENSGT00940000158568 ENSGT00940000155256 ENSGT00390000012030.a ENSGT00950000182894.D ENSGT00390000015369 ENSGT00940000154317.a.a ENSGT00390000003880.b.a ENSGT00950000182941.a.a.b #22 ENSGT00950000183163.a.a #23 ENSGT00940000160627 #24 ENSGT00940000154096.b.b.b.b.a ##25 ENSGT00950000182986.b #26 ENSGT00510000048364 ENSGT00390000004808 #27 ENSGT00390000001737 #29 ENSGT00940000158915 #30 Golden snub-nosed monkey MODERN SPECIES 880 KIAA0319L (ENSRROG00000033805) ENSRROG00000033752 NCDN (ENSRROG00000042808) TFAP2E (ENSRROG00000042239) PSMB2 (ENSRROG00000029102) C1orf216 (ENSRROG00000023698) CLSPN (ENSRROG00000030857) AGO4 (ENSRROG00000035783) AGO1 (ENSRROG00000044469) AGO3 (ENSRROG00000042180) ENSRROG00000027570 TEKT2 (ENSRROG00000039414) ADPRS (ENSRROG00000030199) COL8A2 (ENSRROG00000030627) TRAPPC3 (ENSRROG00000034420) MAP7D1 (ENSRROG00000045698) #22 THRAP3 (ENSRROG00000028592) #23 SH3D21 (ENSRROG00000042801) #24 EVA1B (ENSRROG00000034651) ##25 STK40 (ENSRROG00000025639) #26 LSM10 (ENSRROG00000011414) OSCP1 (ENSRROG00000032439) #27 MRPS15 (ENSRROG00000045410) #29 CSF3R (ENSRROG00000040755) #30 IQCF3 (ENSRROG00000035667) IQCF2 (ENSRROG00000042169) IQCF5 (ENSRROG00000011279) IQCF1 (ENSRROG00000037019) Black snub-nosed monkey MODERN SPECIES 766 KIAA0319L (ENSRBIG00000040947) ENSRBIG00000041273 NCDN (ENSRBIG00000023812) TFAP2E (ENSRBIG00000038962) PSMB2 (ENSRBIG00000034620) C1orf216 (ENSRBIG00000010891) CLSPN (ENSRBIG00000030748) AGO4 (ENSRBIG00000040185) AGO1 (ENSRBIG00000032611) AGO3 (ENSRBIG00000043774) ENSRBIG00000006280 TEKT2 (ENSRBIG00000044673) ADPRS (ENSRBIG00000004132) COL8A2 (ENSRBIG00000043182) TRAPPC3 (ENSRBIG00000043692) MAP7D1 (ENSRBIG00000032601) #22 THRAP3 (ENSRBIG00000031284) #23 SH3D21 (ENSRBIG00000031442) #24 EVA1B (ENSRBIG00000035344) ##25 STK40 (ENSRBIG00000036383) #26 LSM10 (ENSRBIG00000001561) OSCP1 (ENSRBIG00000032588) #27 MRPS15 (ENSRBIG00000038467) #29 CSF3R (ENSRBIG00000036474) #30 Platyrrhini ANCESTRAL SPECIES ENSGT00940000156221.e.a ENSGT00940000159550 ENSGT00940000157613 ENSGT00390000013601 ENSGT00950000182848.c.b.b.a ENSGT00640000091536.k.a ENSGT00390000001867 ENSGT00390000012738 ENSGT00940000158729 ENSGT00940000158568 ENSGT00940000155256 ENSGT00950000182894.D ENSGT00390000015369 ENSGT00940000154317.a.a ENSGT00390000003880.b.a ENSGT00950000182941.a.a.b #22 ENSGT00950000183163.a.a #23 ENSGT00940000160627 #24 ENSGT00940000154096.b.b.b.b.a ##25 ENSGT00950000182986.b #26 ENSGT00510000048364.i ENSGT00390000004808 #27 ENSGT00390000001737 #29 ENSGT00940000158915 #30 ENSGT00940000159465 #31 ENSGT00940000155107.a.a #32 ENSGT00390000015257 ENSGT00940000156553 #20 ENSGT00390000003012 #19 ENSGT00810000125524 #18 ENSGT00940000158871 #17 Cebidae ANCESTRAL SPECIES 1 ENSGT00940000156221.e.a ENSGT00940000159550 ENSGT00940000157613 ENSGT00390000013601 ENSGT00950000182848.c.b.b.a ENSGT00640000091536.k.a ENSGT00390000001867 ENSGT00390000012738 ENSGT00940000158729 ENSGT00940000158568 ENSGT00940000155256 ENSGT00950000182894.D ENSGT00390000015369 ENSGT00940000154317.a.a ENSGT00390000003880.b.a ENSGT00950000182941.a.a.b #22 ENSGT00950000183163.a.a #23 ENSGT00940000160627 #24 ENSGT00940000154096.b.b.b.b.a ##25 ENSGT00950000182986.b #26 ENSGT00510000048364.i ENSGT00390000004808 #27 ENSGT00390000001737 #29 ENSGT00940000158915 #30 ENSGT00940000159465 #31 ENSGT00940000155107.a.a #32 ENSGT00390000015257 ENSGT00940000156553 #20 ENSGT00390000003012 #19 ENSGT00810000125524 #18 ENSGT00940000158871 #17 Marmoset MODERN SPECIES 19 SFPQ (ENSCJAG00000001431) ZMYM4 (ENSCJAG00000001447) KIAA0319L (ENSCJAG00000001486) NCDN (ENSCJAG00000001525) TFAP2E (ENSCJAG00000001531) PSMB2 (ENSCJAG00000038344) C1orf216 (ENSCJAG00000044395) CLSPN (ENSCJAG00000001559) AGO4 (ENSCJAG00000001610) AGO1 (ENSCJAG00000032023) AGO3 (ENSCJAG00000031580) TEKT2 (ENSCJAG00000001705) ADPRS (ENSCJAG00000001719) COL8A2 (ENSCJAG00000046041) TRAPPC3 (ENSCJAG00000001734) MAP7D1 (ENSCJAG00000001746) #22 THRAP3 (ENSCJAG00000001754) #23 SH3D21 (ENSCJAG00000001796) #24 EVA1B (ENSCJAG00000001807) ##25 STK40 (ENSCJAG00000001818) #26 LSM10 (ENSCJAG00000044880) OSCP1 (ENSCJAG00000001826) #27 MRPS15 (ENSCJAG00000001852) #29 CSF3R (ENSCJAG00000001860) #30 GRIK3 (ENSCJAG00000001873) #31 ZC3H12A (ENSCJAG00000056482) #32 MEAF6 (ENSCJAG00000001927) SNIP1 (ENSCJAG00000001963) #20 DNALI1 (ENSCJAG00000057297) #19 ENSCJAG00000001998 #18 C1orf109 (ENSCJAG00000062886) Cebidae_a ANCESTRAL SPECIES ENSGT00940000156221.e.a ENSGT00940000159550 ENSGT00940000157613 ENSGT00390000013601 ENSGT00950000182848.c.b.b.a ENSGT00640000091536.k.a ENSGT00390000001867 ENSGT00390000012738 ENSGT00940000158729 ENSGT00940000158568 ENSGT00940000155256 ENSGT00950000182894.D ENSGT00390000015369 ENSGT00940000154317.a.a ENSGT00390000003880.b.a ENSGT00950000182941.a.a.b #22 ENSGT00950000183163.a.a #23 ENSGT00940000160627 #24 ENSGT00940000154096.b.b.b.b.a ##25 ENSGT00950000182986.b #26 ENSGT00510000048364.i ENSGT00390000004808 #27 ENSGT00390000001737 #29 ENSGT00940000158915 #30 ENSGT00940000159465 #31 ENSGT00940000155107.a.a #32 ENSGT00390000015257 ENSGT00940000156553.r #20 ENSGT00390000003012 #19 ENSGT00810000125524 #18 ENSGT00940000158871 #17 Bolivian squirrel monkey MODERN SPECIES 135 ZMYM1 (ENSSBOG00000024618) ENSSBOG00000024972 ZMYM4 (ENSSBOG00000033026) KIAA0319L (ENSSBOG00000030468) NCDN (ENSSBOG00000036150) TFAP2E (ENSSBOG00000035566) ENSSBOG00000035339 CLSPN (ENSSBOG00000034344) AGO4 (ENSSBOG00000026529) AGO1 (ENSSBOG00000020867) AGO3 (ENSSBOG00000029981) TEKT2 (ENSSBOG00000022674) ADPRS (ENSSBOG00000028837) COL8A2 (ENSSBOG00000027384) TRAPPC3 (ENSSBOG00000033429) MAP7D1 (ENSSBOG00000032444) #22 THRAP3 (ENSSBOG00000029130) #23 SH3D21 (ENSSBOG00000032808) #24 EVA1B (ENSSBOG00000023166) ##25 STK40 (ENSSBOG00000030732) #26 ENSSBOG00000036413 OSCP1 (ENSSBOG00000014944) #27 MRPS15 (ENSSBOG00000034679) #29 CSF3R (ENSSBOG00000029331) #30 ENSSBOG00000025138 ENSSBOG00000032606 GRIK3 (ENSSBOG00000034275) #31 ZC3H12A (ENSSBOG00000028357) #32 MEAF6 (ENSSBOG00000033011) Capuchin MODERN SPECIES 277 NCDN (ENSCCAG00000035361) TFAP2E (ENSCCAG00000014473) ENSCCAG00000025604 ENSCCAG00000020290 C1orf216 (ENSCCAG00000032404) ENSCCAG00000032336 CLSPN (ENSCCAG00000020740) ENSCCAG00000007055 AGO4 (ENSCCAG00000001397) AGO1 (ENSCCAG00000011823) AGO3 (ENSCCAG00000034189) TEKT2 (ENSCCAG00000034337) ADPRS (ENSCCAG00000029534) COL8A2 (ENSCCAG00000034498) TRAPPC3 (ENSCCAG00000016538) MAP7D1 (ENSCCAG00000023770) #22 THRAP3 (ENSCCAG00000028401) #23 SH3D21 (ENSCCAG00000027849) #24 EVA1B (ENSCCAG00000025930) ##25 STK40 (ENSCCAG00000035718) #26 ENSCCAG00000037064 CEP63 (ENSCCAG00000027864) KY (ENSCCAG00000017585) EPHB1 (ENSCCAG00000024853) PPP2R3A (ENSCCAG00000034294) MSL2 (ENSCCAG00000018654) ENSCCAG00000036817 Mas night monkey MODERN SPECIES 957 ZMYM4 (ENSANAG00000032379) ENSANAG00000027043 KIAA0319L (ENSANAG00000030578) NCDN (ENSANAG00000030003) TFAP2E (ENSANAG00000033962) PSMB2 (ENSANAG00000034782) C1orf216 (ENSANAG00000017316) CLSPN (ENSANAG00000037355) AGO4 (ENSANAG00000031428) AGO1 (ENSANAG00000037711) AGO3 (ENSANAG00000037735) TEKT2 (ENSANAG00000027050) ADPRS (ENSANAG00000027244) COL8A2 (ENSANAG00000030537) TRAPPC3 (ENSANAG00000029327) MAP7D1 (ENSANAG00000015395) #22 ENSANAG00000032677 ENSANAG00000024479 #23 SH3D21 (ENSANAG00000028854) #24 EVA1B (ENSANAG00000029581) ##25 STK40 (ENSANAG00000026859) #26 ENSANAG00000018759 OSCP1 (ENSANAG00000026578) #27 MRPS15 (ENSANAG00000024978) #29 CSF3R (ENSANAG00000031691) #30 ENSANAG00000029021 GRIK3 (ENSANAG00000037814) #31 ZC3H12A (ENSANAG00000009908) #32 ENSANAG00000028024 SNIP1 (ENSANAG00000019123) #20 DNALI1 (ENSANAG00000014001) #19 Tarsier MODERN SPECIES 4773 TEKT2 (ENSTSYG00000000204) ADPRHL2 (ENSTSYG00000011188) COL8A2 (ENSTSYG00000035637) TRAPPC3 (ENSTSYG00000000393) MAP7D1 (ENSTSYG00000001484) #22 THRAP3 (ENSTSYG00000012214) #23 SH3D21 (ENSTSYG00000035793) #24 STK40 (ENSTSYG00000005872) #26 OSCP1 (ENSTSYG00000010954) #27 CSF3R (ENSTSYG00000007230) #30 GRIK3 (ENSTSYG00000000594) #31 Strepsirrhini ANCESTRAL SPECIES ENSGT00940000159550 ENSGT00940000157613 ENSGT00390000013601 ENSGT00950000182848.c.b.b.a ENSGT00640000091536 ENSGT00390000001867 ENSGT00390000012738 ENSGT00940000158729.e ENSGT00940000158568 ENSGT00940000155256 ENSGT00390000012030.a ENSGT00950000182894.D ENSGT00390000015369 ENSGT00940000154317.a.a ENSGT00390000003880.b.a ENSGT00950000182941.a.a.b #22 ENSGT00950000183163.a.a #23 ENSGT00940000160627 #24 ENSGT00940000154096.b.b.b.b.a ##25 ENSGT00950000182986.b #26 ENSGT00510000048364 ENSGT00390000004808 #27 ENSGT00390000001737 #29 ENSGT00940000158915 #30 ENSGT00940000159465 #31 ENSGT00940000155107.a.a #32 ENSGT00390000015257 ENSGT00940000156553 #20 ENSGT00390000003012 #19 ENSGT00810000125524 #18 ENSGT00940000158871 #17 Lemuriformes ANCESTRAL SPECIES ENSGT00940000159550 ENSGT00940000157613 ENSGT00390000013601 ENSGT00950000182848.c.b.b.a ENSGT00640000091536 ENSGT00390000001867 ENSGT00390000012738 ENSGT00940000158729.e ENSGT00940000158568 ENSGT00940000155256 ENSGT00390000012030.a ENSGT00950000182894.D ENSGT00390000015369 ENSGT00940000154317.a.a ENSGT00390000003880.b.a ENSGT00950000182941.a.a.b #22 ENSGT00950000183163.a.a #23 ENSGT00940000160627 #24 ENSGT00940000154096.b.b.b.b.a ##25 ENSGT00950000182986.b #26 ENSGT00510000048364 ENSGT00390000004808 #27 ENSGT00390000001737 #29 ENSGT00940000158915 #30 ENSGT00940000159465 #31 ENSGT00940000155107.a.a #32 ENSGT00390000015257 ENSGT00940000156553 #20 ENSGT00390000003012 #19 ENSGT00810000125524 #18 ENSGT00940000158871 #17 Mouse lemur MODERN SPECIES 11 ZMYM4 (ENSMICG00000031294) KIAA0319L (ENSMICG00000006428) ENSMICG00000035693 NCDN (ENSMICG00000006440) TFAP2E (ENSMICG00000046802) PSMB2 (ENSMICG00000006460) CLSPN (ENSMICG00000005691) AGO4 (ENSMICG00000033507) ENSMICG00000044276 AGO1 (ENSMICG00000016147) AGO3 (ENSMICG00000016158) TEKT2 (ENSMICG00000016171) ADPRS (ENSMICG00000016186) COL8A2 (ENSMICG00000033642) TRAPPC3 (ENSMICG00000016250) MAP7D1 (ENSMICG00000016257) #22 THRAP3 (ENSMICG00000007920) #23 SH3D21 (ENSMICG00000027388) #24 EVA1B (ENSMICG00000044326) ##25 STK40 (ENSMICG00000007931) #26 OSCP1 (ENSMICG00000007944) #27 MRPS15 (ENSMICG00000047526) #29 CSF3R (ENSMICG00000007970) #30 GRIK3 (ENSMICG00000016437) #31 ZC3H12A (ENSMICG00000004790) #32 MEAF6 (ENSMICG00000030115) SNIP1 (ENSMICG00000044466) #20 DNALI1 (ENSMICG00000011878) #19 ENSMICG00000011884 RSPO1 (ENSMICG00000011909) #17 C1orf109 (ENSMICG00000030638) Lemuriformes_a ANCESTRAL SPECIES 58 ENSGT00940000159550 ENSGT00940000157613 ENSGT00390000013601 ENSGT00950000182848.c.b.b.a ENSGT00640000091536 ENSGT00390000001867 ENSGT00390000012738 ENSGT00940000158729.e ENSGT00940000158568 ENSGT00940000155256 ENSGT00390000012030.a ENSGT00950000182894.D ENSGT00390000015369 ENSGT00940000154317.a.a ENSGT00390000003880.b.a ENSGT00950000182941.a.a.b #22 ENSGT00950000183163.a.a #23 ENSGT00940000160627 #24 ENSGT00940000154096.b.b.b.b.a ##25 ENSGT00950000182986.b #26 ENSGT00510000048364 ENSGT00390000004808 #27 ENSGT00390000001737 #29 ENSGT00940000158915 #30 ENSGT00940000159465 #31 Coquerels sifaka MODERN SPECIES 257 ENSPCOG00000006560 ZMYM4 (ENSPCOG00000018590) KIAA0319L (ENSPCOG00000025777) NCDN (ENSPCOG00000023262) TFAP2E (ENSPCOG00000017621) PSMB2 (ENSPCOG00000024983) ENSPCOG00000007974 CLSPN (ENSPCOG00000017966) AGO4 (ENSPCOG00000015935) AGO1 (ENSPCOG00000022061) AGO3 (ENSPCOG00000028390) TEKT2 (ENSPCOG00000026680) ADPRS (ENSPCOG00000015295) COL8A2 (ENSPCOG00000018858) TRAPPC3 (ENSPCOG00000021901) MAP7D1 (ENSPCOG00000024366) #22 ENSPCOG00000028655 THRAP3 (ENSPCOG00000027521) #23 SH3D21 (ENSPCOG00000013355) #24 EVA1B (ENSPCOG00000022411) ##25 STK40 (ENSPCOG00000024517) #26 OSCP1 (ENSPCOG00000021088) #27 MRPS15 (ENSPCOG00000014731) #29 CSF3R (ENSPCOG00000019162) #30 GRIK3 (ENSPCOG00000025879) #31 Greater bamboo lemur MODERN SPECIES 1104 AGO4 (ENSPSMG00000008413) AGO1 (ENSPSMG00000008155) AGO3 (ENSPSMG00000007852) ENSPSMG00000007627 TEKT2 (ENSPSMG00000007624) ADPRS (ENSPSMG00000007612) COL8A2 (ENSPSMG00000007598) TRAPPC3 (ENSPSMG00000007582) MAP7D1 (ENSPSMG00000007504) #22 THRAP3 (ENSPSMG00000007350) #23 SH3D21 (ENSPSMG00000007326) #24 EVA1B (ENSPSMG00000007322) ##25 STK40 (ENSPSMG00000007309) #26 LSM10 (ENSPSMG00000007286) OSCP1 (ENSPSMG00000007256) #27 MRPS15 (ENSPSMG00000007209) #29 CSF3R (ENSPSMG00000007169) #30 GRIK3 (ENSPSMG00000007001) #31 Bushbaby MODERN SPECIES 140 ZMYM4 (ENSOGAG00000017019) KIAA0319L (ENSOGAG00000002092) NCDN (ENSOGAG00000034366) TFAP2E (ENSOGAG00000029197) PSMB2 (ENSOGAG00000002097) C1orf216 (ENSOGAG00000004230) CLSPN (ENSOGAG00000004231) ENSOGAG00000032752 ENSOGAG00000004233 AGO1 (ENSOGAG00000010279) AGO3 (ENSOGAG00000010290) TEKT2 (ENSOGAG00000032145) ADPRS (ENSOGAG00000026312) COL8A2 (ENSOGAG00000034217) TRAPPC3 (ENSOGAG00000029810) MAP7D1 (ENSOGAG00000013476) #22 THRAP3 (ENSOGAG00000002648) #23 ENSOGAG00000028592 #24 EVA1B (ENSOGAG00000025550) ##25 STK40 (ENSOGAG00000002651) #26 LSM10 (ENSOGAG00000002653) OSCP1 (ENSOGAG00000002654) #27 ENSOGAG00000002656 #29 CSF3R (ENSOGAG00000002660) #30 GRIK3 (ENSOGAG00000002138) #31 ZC3H12A (ENSOGAG00000030940) #32 MEAF6 (ENSOGAG00000006773) SNIP1 (ENSOGAG00000008634) #20 DNALI1 (ENSOGAG00000008639) #19 GNL2 (ENSOGAG00000008643) #18 RSPO1 (ENSOGAG00000008648) #17 Euarchontoglires_A ANCESTRAL SPECIES ENSGT00940000157613 ENSGT00940000168628 ENSGT00390000013601 ENSGT00950000182848.c.b.b.a ENSGT00640000091536 ENSGT00390000001867 ENSGT00390000012738 ENSGT00940000158729 ENSGT00940000158568 ENSGT00940000155256 ENSGT00390000012030.a ENSGT00950000182894.D ENSGT00390000015369 ENSGT00940000154317.a.a ENSGT00390000003880.b.a ENSGT00950000182941.a.a.b #22 ENSGT00950000183163.a.a #23 ENSGT00940000160627 #24 ENSGT00940000154096.b.b.b.b.a ##25 ENSGT00950000182986.b #26 ENSGT00510000048364 ENSGT00390000004808 #27 ENSGT00390000001737 #29 ENSGT00940000158915 #30 ENSGT00940000159465 #31 ENSGT00940000155107.a.a #32 ENSGT00390000015257 ENSGT00940000156553 #20 ENSGT00390000003012 #19 ENSGT00810000125524 #18 ENSGT00940000158871 #17 Tree shrew MODERN SPECIES 694 ENSTBEG00000009249 #22 TRAPPC3 (ENSTBEG00000001735) Glires ANCESTRAL SPECIES ENSGT00940000157613 ENSGT00940000168628 ENSGT00390000013601 ENSGT00950000182848.c.b.b.a ENSGT00640000091536 ENSGT00390000001867 ENSGT00390000012738 ENSGT00940000158729 ENSGT00940000158568 ENSGT00940000155256 ENSGT00390000012030.a ENSGT00950000182894.D ENSGT00390000015369 ENSGT00940000154317.a.a ENSGT00390000003880.b.a ENSGT00950000182941.a.a.b #22 ENSGT00950000183163.a.a #23 ENSGT00940000160627 #24 ENSGT00940000154096.b.b.b.b.a ##25 ENSGT00950000182986.b #26 ENSGT00510000048364 ENSGT00390000004808 #27 ENSGT00390000001737 #29 ENSGT00940000158915 #30 ENSGT00940000159465 #31 ENSGT00940000155107.a.a #32 ENSGT00390000015257 ENSGT00940000156553 #20 ENSGT00390000003012 #19 ENSGT00810000125524 #18 ENSGT00940000158871 #17 Rodentia ANCESTRAL SPECIES ENSGT00940000159550 ENSGT00940000157613 ENSGT00940000168628 ENSGT00390000013601 ENSGT00950000182848.c.b.b.a ENSGT00640000091536 ENSGT00390000001867 ENSGT00390000012738 ENSGT00940000158729 ENSGT00940000158568 ENSGT00940000155256 ENSGT00950000182894.D ENSGT00390000015369 ENSGT00940000154317.a.a ENSGT00390000003880.b.a ENSGT00950000182941.a.a.b #22 ENSGT00950000183163.a.a #23 ENSGT00940000160627 #24 ENSGT00940000154096.b.b.b.b.a ##25 ENSGT00950000182986.b #26 ENSGT00510000048364 ENSGT00390000004808 #27 ENSGT00390000001737 #29 ENSGT00940000158915 #30 ENSGT00940000159465 #31 ENSGT00940000155107.a.a #32 ENSGT00390000015257 ENSGT00940000156553 #20 ENSGT00390000003012 #19 ENSGT00810000125524 #18 ENSGT00940000158871 #17 Rodentia_A ANCESTRAL SPECIES ENSGT00940000156221 ENSGT00940000159550 ENSGT00940000157613 ENSGT00390000013601 ENSGT00950000182848.c.b.b.a ENSGT00640000091536 ENSGT00390000001867 ENSGT00390000012738 ENSGT00940000158729 ENSGT00940000158568 ENSGT00940000155256 ENSGT00950000182894.D ENSGT00390000015369 ENSGT00940000154317.a.a ENSGT00390000003880.b.a ENSGT00950000182941.a.a.b #22 ENSGT00950000183163.a.a #23 ENSGT00940000160627 #24 ENSGT00940000154096.b.b.b.b.a ##25 ENSGT00950000182986.b #26 ENSGT00510000048364 ENSGT00390000004808 #27 ENSGT00390000001737 #29 ENSGT00940000158915 #30 ENSGT00940000159465 #31 ENSGT00940000155107.a.a #32 ENSGT00390000015257 ENSGT00940000156553 #20 ENSGT00390000003012 #19 ENSGT00810000125524 #18 ENSGT00940000158871 #17 Hystricomorpha ANCESTRAL SPECIES 4 ENSGT00940000156221 ENSGT00940000159550 ENSGT00940000157613 ENSGT00390000013601 ENSGT00950000182848.c.b.b.a ENSGT00640000091536 ENSGT00390000001867 ENSGT00390000012738 ENSGT00940000158729 ENSGT00940000158568 ENSGT00940000155256 ENSGT00950000182894.D ENSGT00390000015369 ENSGT00940000154317.a.a ENSGT00390000003880.b.a ENSGT00950000182941.a.a.b #22 ENSGT00950000183163.a.a #23 ENSGT00940000160627 #24 ENSGT00940000154096.b.b.b.b.a ##25 ENSGT00950000182986.b #26 ENSGT00510000048364 ENSGT00390000004808 #27 ENSGT00390000001737 #29 ENSGT00940000158915 #30 ENSGT00940000159465 #31 ENSGT00940000155107.a.a #32 ENSGT00390000015257 ENSGT00940000156553 #20 ENSGT00390000003012 #19 ENSGT00810000125524 #18 ENSGT00940000158871 #17 Hystricomorpha_a ANCESTRAL SPECIES 1 ENSGT00940000156221 ENSGT00940000159550 ENSGT00940000157613 ENSGT00390000013601 ENSGT00950000182848.c.b.b.a ENSGT00640000091536 ENSGT00390000001867 ENSGT00390000012738 ENSGT00940000158729 ENSGT00940000158568 ENSGT00940000155256 ENSGT00950000182894.D ENSGT00390000015369 ENSGT00940000154317.a.a ENSGT00390000003880.b.a ENSGT00950000182941.a.a.b #22 ENSGT00950000183163.a.a #23 ENSGT00940000160627 #24 ENSGT00940000154096.b.b.b.b.a ##25 ENSGT00950000182986.b #26 ENSGT00510000048364 ENSGT00390000004808 #27 ENSGT00390000001737 #29 ENSGT00940000158915 #30 ENSGT00940000159465 #31 ENSGT00940000155107.a.a #32 ENSGT00390000015257 ENSGT00940000156553 #20 ENSGT00390000003012 #19 ENSGT00810000125524 #18 ENSGT00940000158871 #17 Hystricomorpha_b ANCESTRAL SPECIES 7 ENSGT00940000156221 ENSGT00940000159550 ENSGT00940000157613 ENSGT00390000013601 ENSGT00950000182848.c.b.b.a ENSGT00640000091536 ENSGT00390000001867 ENSGT00390000012738 ENSGT00940000158729 ENSGT00940000158568 ENSGT00940000155256 ENSGT00950000182894.D ENSGT00390000015369 ENSGT00940000154317.a.a ENSGT00390000003880.b.a ENSGT00950000182941.a.a.b #22 ENSGT00950000183163.a.a #23 ENSGT00940000160627 #24 ENSGT00940000154096.b.b.b.b.a ##25 ENSGT00950000182986.b #26 ENSGT00510000048364 ENSGT00390000004808 #27 ENSGT00390000001737 #29 ENSGT00940000158915 #30 ENSGT00940000159465 #31 ENSGT00940000155107.a.a #32 ENSGT00390000015257 ENSGT00940000156553 #20 ENSGT00390000003012 #19 ENSGT00810000125524 #18 ENSGT00940000158871 #17 Long-tailed chinchilla MODERN SPECIES 159 ENSCLAG00000009583 ZMYM4 (ENSCLAG00000009236) KIAA0319L (ENSCLAG00000012151) NCDN (ENSCLAG00000008627) TFAP2E (ENSCLAG00000014043) PSMB2 (ENSCLAG00000011404) C1orf216 (ENSCLAG00000014133) CLSPN (ENSCLAG00000009173) AGO4 (ENSCLAG00000012097) AGO1 (ENSCLAG00000011507) AGO3 (ENSCLAG00000013184) TEKT2 (ENSCLAG00000011534) ADPRS (ENSCLAG00000013083) COL8A2 (ENSCLAG00000007777) TRAPPC3 (ENSCLAG00000007951) MAP7D1 (ENSCLAG00000011145) #22 THRAP3 (ENSCLAG00000013043) #23 ENSCLAG00000014941 #24 EVA1B (ENSCLAG00000012665) ##25 STK40 (ENSCLAG00000008274) #26 LSM10 (ENSCLAG00000008633) OSCP1 (ENSCLAG00000008808) #27 MRPS15 (ENSCLAG00000015562) #29 CSF3R (ENSCLAG00000013775) #30 GRIK3 (ENSCLAG00000012617) #31 ZC3H12A (ENSCLAG00000008722) #32 MEAF6 (ENSCLAG00000011410) SNIP1 (ENSCLAG00000014140) #20 DNALI1 (ENSCLAG00000014051) #19 GNL2 (ENSCLAG00000012504) #18 RSPO1 (ENSCLAG00000016364) #17 Degu MODERN SPECIES 171 NCDN (ENSODEG00000006887) TFAP2E (ENSODEG00000004925) PSMB2 (ENSODEG00000006435) ENSODEG00000019417 CLSPN (ENSODEG00000006133) AGO4 (ENSODEG00000006355) ENSODEG00000007754 AGO1 (ENSODEG00000005321) AGO3 (ENSODEG00000005161) ENSODEG00000019305 ENSODEG00000006322 TEKT2 (ENSODEG00000007150) ADPRS (ENSODEG00000006213) ENSODEG00000006340 ENSODEG00000007410 MAP7D1 (ENSODEG00000005198) #22 ENSODEG00000006090 #23 SH3D21 (ENSODEG00000005155) #24 EVA1B (ENSODEG00000006459) ##25 STK40 (ENSODEG00000005380) #26 LSM10 (ENSODEG00000019161) OSCP1 (ENSODEG00000005227) #27 MRPS15 (ENSODEG00000005390) #29 CSF3R (ENSODEG00000006285) #30 GRIK3 (ENSODEG00000005952) #31 ENSODEG00000019238 ZC3H12A (ENSODEG00000005643) #32 ENSODEG00000007741 SNIP1 (ENSODEG00000005648) #20 DNALI1 (ENSODEG00000006719) #19 ENSODEG00000005679 Guinea pig MODERN SPECIES 25 ENSCPOG00000015018 ZMYM4 (ENSCPOG00000008336) KIAA0319L (ENSCPOG00000008350) NCDN (ENSCPOG00000023962) TFAP2E (ENSCPOG00000024445) PSMB2 (ENSCPOG00000036531) C1orf216 (ENSCPOG00000031562) ENSCPOG00000011544 AGO4 (ENSCPOG00000011557) AGO1 (ENSCPOG00000011568) AGO3 (ENSCPOG00000030524) TEKT2 (ENSCPOG00000006152) ADPRS (ENSCPOG00000031369) COL8A2 (ENSCPOG00000039740) TRAPPC3 (ENSCPOG00000038851) MAP7D1 (ENSCPOG00000000559) #22 ENSCPOG00000037255 THRAP3 (ENSCPOG00000015742) #23 EVA1B (ENSCPOG00000020754) ##25 STK40 (ENSCPOG00000027226) #26 LSM10 (ENSCPOG00000039302) OSCP1 (ENSCPOG00000010874) #27 MRPS15 (ENSCPOG00000010877) #29 CSF3R (ENSCPOG00000010879) #30 GRIK3 (ENSCPOG00000025605) #31 ZC3H12A (ENSCPOG00000011081) #32 MEAF6 (ENSCPOG00000025988) SNIP1 (ENSCPOG00000011083) #20 DNALI1 (ENSCPOG00000011086) #19 GNL2 (ENSCPOG00000026804) #18 RSPO1 (ENSCPOG00000038977) #17 Naked mole-rat female MODERN SPECIES 26 ENSHGLG00000048349 KIAA0319L (ENSHGLG00000010433) NCDN (ENSHGLG00000012088) TFAP2E (ENSHGLG00000035632) PSMB2 (ENSHGLG00000039477) C1orf216 (ENSHGLG00000013004) ENSHGLG00000039952 CLSPN (ENSHGLG00000013282) AGO4 (ENSHGLG00000010241) AGO1 (ENSHGLG00000011540) AGO3 (ENSHGLG00000012538) TEKT2 (ENSHGLG00000019203) ADPRS (ENSHGLG00000018720) ENSHGLG00000033231 ENSHGLG00000013854 MAP7D1 (ENSHGLG00000014101) #22 THRAP3 (ENSHGLG00000019374) #23 ENSHGLG00000011928 ENSHGLG00000035766 ##25 STK40 (ENSHGLG00000010896) #26 ENSHGLG00000011625 OSCP1 (ENSHGLG00000011822) #27 ENSHGLG00000047064 #29 ENSHGLG00000044262 CSF3R (ENSHGLG00000010743) #30 GRIK3 (ENSHGLG00000011776) #31 ENSHGLG00000046483 ZC3H12A (ENSHGLG00000012808) #32 MEAF6 (ENSHGLG00000013675) SNIP1 (ENSHGLG00000045104) #20 DNALI1 (ENSHGLG00000012722) #19 Sciuridae ANCESTRAL SPECIES 3 ENSGT00940000156221 ENSGT00940000159550 ENSGT00940000157613 ENSGT00390000013601 ENSGT00950000182848.c.b.b.a ENSGT00640000091536 ENSGT00390000001867 ENSGT00390000012738 ENSGT00940000158729 ENSGT00940000158568 ENSGT00940000155256.f ENSGT00950000182894.D ENSGT00390000015369 ENSGT00940000154317.a.a ENSGT00390000003880.b.a ENSGT00950000182941.a.a.b #22 ENSGT00950000183163.a.a #23 ENSGT00940000160627 #24 ENSGT00940000154096.b.b.b.b.a ##25 ENSGT00950000182986.b #26 ENSGT00510000048364 ENSGT00390000004808 #27 ENSGT00390000001737 #29 ENSGT00940000158915 #30 ENSGT00940000159465 #31 ENSGT00940000155107.a.a #32 ENSGT00390000015257 ENSGT00940000156553 #20 ENSGT00390000003012 #19 ENSGT00810000125524 #18 ENSGT00940000158871 #17 Marmotini ANCESTRAL SPECIES ENSGT00940000156221.i ENSGT00940000159550 ENSGT00940000157613 ENSGT00390000013601 ENSGT00950000182848.c.b.b.a ENSGT00640000091536 ENSGT00390000001867 ENSGT00390000012738 ENSGT00940000158729 ENSGT00940000158568 ENSGT00940000155256.f ENSGT00950000182894.D ENSGT00390000015369 ENSGT00940000154317.a.a ENSGT00390000003880.b.a ENSGT00950000182941.a.a.b #22 ENSGT00950000183163.a.a #23 ENSGT00940000160627 #24 ENSGT00940000154096.b.b.b.b.a ##25 ENSGT00950000182986.b #26 ENSGT00510000048364 ENSGT00390000004808 #27 ENSGT00390000001737 #29 ENSGT00940000158915 #30 ENSGT00940000159465 #31 ENSGT00940000155107.a.a #32 ENSGT00390000015257 ENSGT00940000156553 #20 ENSGT00390000003012 #19 ENSGT00810000125524 #18 ENSGT00940000158871 #17 Marmotini_b ANCESTRAL SPECIES ENSGT00940000156221.i ENSGT00940000159550 ENSGT00940000157613 ENSGT00390000013601 ENSGT00950000182848.c.b.b.a ENSGT00640000091536 ENSGT00390000001867 ENSGT00390000012738 ENSGT00940000158729 ENSGT00940000158568 ENSGT00940000155256.f ENSGT00950000182894.D ENSGT00390000015369 ENSGT00940000154317.a.a ENSGT00390000003880.b.a ENSGT00950000182941.a.a.b #22 ENSGT00950000183163.a.a #23 ENSGT00940000160627 #24 ENSGT00940000154096.b.b.b.b.a ##25 ENSGT00950000182986.b #26 ENSGT00510000048364 ENSGT00390000004808 #27 ENSGT00390000001737 #29 ENSGT00940000158915 #30 ENSGT00940000159465 #31 ENSGT00940000155107.a.a #32 ENSGT00390000015257 ENSGT00940000156553 #20 ENSGT00390000003012 #19 ENSGT00810000125524 #18 ENSGT00940000158871 #17 Arctic ground squirrel MODERN SPECIES 120 ENSUPAG00010000666 ZMYM4 (ENSUPAG00010000592) KIAA0319L (ENSUPAG00010000550) NCDN (ENSUPAG00010000503) TFAP2E (ENSUPAG00010000482) PSMB2 (ENSUPAG00010000458) C1orf216 (ENSUPAG00010000447) CLSPN (ENSUPAG00010000278) AGO4 (ENSUPAG00010000240) AGO1 (ENSUPAG00010000213) AGO3 (ENSUPAG00010000133) TEKT2 (ENSUPAG00010000079) ADPRS (ENSUPAG00010000029) COL8A2 (ENSUPAG00010017659) TRAPPC3 (ENSUPAG00010017653) MAP7D1 (ENSUPAG00010017568) #22 THRAP3 (ENSUPAG00010017531) #23 SH3D21 (ENSUPAG00010017516) #24 EVA1B (ENSUPAG00010017508) ##25 STK40 (ENSUPAG00010017491) #26 ENSUPAG00010017484 OSCP1 (ENSUPAG00010017454) #27 MRPS15 (ENSUPAG00010017437) #29 CSF3R (ENSUPAG00010017417) #30 GRIK3 (ENSUPAG00010017396) #31 ZC3H12A (ENSUPAG00010017379) #32 MEAF6 (ENSUPAG00010017344) SNIP1 (ENSUPAG00010017338) #20 DNALI1 (ENSUPAG00010017332) #19 ENSUPAG00010017290 RSPO1 (ENSUPAG00010017283) #17 Squirrel MODERN SPECIES 74 KIAA0319L (ENSSTOG00000001767) ENSSTOG00000022215 NCDN (ENSSTOG00000025477) TFAP2E (ENSSTOG00000001781) PSMB2 (ENSSTOG00000001795) ENSSTOG00000025789 C1orf216 (ENSSTOG00000000870) CLSPN (ENSSTOG00000021294) AGO4 (ENSSTOG00000004725) AGO1 (ENSSTOG00000010857) AGO3 (ENSSTOG00000025904) TEKT2 (ENSSTOG00000010245) ADPRS (ENSSTOG00000010251) COL8A2 (ENSSTOG00000023344) TRAPPC3 (ENSSTOG00000010270) MAP7D1 (ENSSTOG00000010274) #22 THRAP3 (ENSSTOG00000000602) #23 EVA1B (ENSSTOG00000023164) ##25 STK40 (ENSSTOG00000027085) #26 LSM10 (ENSSTOG00000000606) OSCP1 (ENSSTOG00000000607) #27 MRPS15 (ENSSTOG00000000608) #29 CSF3R (ENSSTOG00000000615) #30 GRIK3 (ENSSTOG00000010632) #31 ZC3H12A (ENSSTOG00000026842) #32 MEAF6 (ENSSTOG00000005166) SNIP1 (ENSSTOG00000025511) #20 DNALI1 (ENSSTOG00000005196) #19 GNL2 (ENSSTOG00000005217) #18 RSPO1 (ENSSTOG00000005254) #17 C1orf109 (ENSSTOG00000000834) Alpin marmot MODERN SPECIES 15 ENSMMMG00000008037 ZMYM4 (ENSMMMG00000007967) KIAA0319L (ENSMMMG00000007937) NCDN (ENSMMMG00000007929) TFAP2E (ENSMMMG00000007915) PSMB2 (ENSMMMG00000007906) C1orf216 (ENSMMMG00000007900) CLSPN (ENSMMMG00000007847) AGO4 (ENSMMMG00000007806) AGO1 (ENSMMMG00000007780) AGO3 (ENSMMMG00000007745) TEKT2 (ENSMMMG00000007715) ADPRS (ENSMMMG00000007700) COL8A2 (ENSMMMG00000007686) TRAPPC3 (ENSMMMG00000007674) MAP7D1 (ENSMMMG00000006325) #22 THRAP3 (ENSMMMG00000006271) #23 SH3D21 (ENSMMMG00000006222) #24 EVA1B (ENSMMMG00000006211) ##25 STK40 (ENSMMMG00000006181) #26 LSM10 (ENSMMMG00000006179) ENSMMMG00000006174 #27 MRPS15 (ENSMMMG00000006160) #29 CSF3R (ENSMMMG00000006145) #30 ENSMMMG00000006132 GRIK3 (ENSMMMG00000006114) #31 ZC3H12A (ENSMMMG00000006073) #32 SNIP1 (ENSMMMG00000006068) #20 DNALI1 (ENSMMMG00000006059) #19 GNL2 (ENSMMMG00000006031) #18 RSPO1 (ENSMMMG00000006021) #17 Eurasian red squirrel MODERN SPECIES ENSSVLG00005001170 ZMYM4 (ENSSVLG00005001206) KIAA0319L (ENSSVLG00005001304) NCDN (ENSSVLG00005001362) TFAP2E (ENSSVLG00005001387) PSMB2 (ENSSVLG00005001408) C1orf216 (ENSSVLG00005001422) CLSPN (ENSSVLG00005001487) AGO4 (ENSSVLG00005001696) AGO1 (ENSSVLG00005001765) AGO3 (ENSSVLG00005001834) TEKT2 (ENSSVLG00005001949) ADPRS (ENSSVLG00005001975) COL8A2 (ENSSVLG00005001986) TRAPPC3 (ENSSVLG00005002006) MAP7D1 (ENSSVLG00005002056) #22 THRAP3 (ENSSVLG00005002113) #23 ENSSVLG00005002147 ENSSVLG00005002157 #24 EVA1B (ENSSVLG00005002184) ##25 STK40 (ENSSVLG00005002214) #26 LSM10 (ENSSVLG00005002235) OSCP1 (ENSSVLG00005002261) #27 MRPS15 (ENSSVLG00005002313) #29 CSF3R (ENSSVLG00005002340) #30 GRIK3 (ENSSVLG00005002397) #31 ZC3H12A (ENSSVLG00005002445) #32 MEAF6 (ENSSVLG00005002483) SNIP1 (ENSSVLG00005002539) #20 DNALI1 (ENSSVLG00005002552) #19 GNL2 (ENSSVLG00005002574) #18 Rodentia_B ANCESTRAL SPECIES ENSGT00940000159550 ENSGT00940000157613 ENSGT00940000168628 ENSGT00390000013601 ENSGT00950000182848.c.b.b.a ENSGT00640000091536 ENSGT00390000001867 ENSGT00390000012738 ENSGT00940000158729 ENSGT00940000158568 ENSGT00940000155256 ENSGT00950000182894.D ENSGT00390000015369 ENSGT00940000154317.a.a ENSGT00390000003880.b.a ENSGT00950000182941.a.a.b #22 ENSGT00950000183163.a.a #23 ENSGT00940000160627 #24 ENSGT00940000154096.b.b.b.b.a ##25 ENSGT00950000182986.b #26 ENSGT00510000048364 ENSGT00390000004808 #27 ENSGT00390000001737 #29 ENSGT00940000158915 #30 ENSGT00940000159465 #31 ENSGT00940000155107.a.a #32 ENSGT00390000015257 ENSGT00940000156553 #20 ENSGT00390000003012 #19 ENSGT00810000125524 #18 ENSGT00940000158871 #17 Kangaroo rat MODERN SPECIES 144 ENSDORG00000014136 #22 Myomorpha ANCESTRAL SPECIES 3 ENSGT00940000159550 ENSGT00940000157613 ENSGT00940000168628 ENSGT00390000013601 ENSGT00950000182848.c.b.b.a ENSGT00640000091536 ENSGT00390000001867 ENSGT00390000012738 ENSGT00940000158729 ENSGT00940000158568 ENSGT00940000155256 ENSGT00950000182894.D ENSGT00390000015369 ENSGT00940000154317.a.a ENSGT00390000003880.b.a ENSGT00950000182941.a.a.b #22 ENSGT00950000183163.a.a #23 ENSGT00940000160627 #24 ENSGT00940000154096.b.b.b.b.a ##25 ENSGT00950000182986.b #26 ENSGT00510000048364 ENSGT00390000004808 #27 ENSGT00390000001737 #29 ENSGT00940000158915 #30 ENSGT00940000159465 #31 ENSGT00940000155107.a.a #32 ENSGT00390000015257 ENSGT00940000156553 #20 ENSGT00390000003012 #19 ENSGT00810000125524 #18 ENSGT00940000158871 #17 Lesser Egyptian jerboa MODERN SPECIES 117 Sfpq (ENSJJAG00000015633) Zmym4 (ENSJJAG00000011913) AU040320 (ENSJJAG00000023709) Ncdn (ENSJJAG00000012057) Tfap2e (ENSJJAG00000023486) ENSJJAG00000015159 5730409E04Rik (ENSJJAG00000009869) Clspn (ENSJJAG00000023223) ENSJJAG00000003401 Ago1 (ENSJJAG00000019449) Ago3 (ENSJJAG00000017436) Tekt2 (ENSJJAG00000012392) Adprs (ENSJJAG00000001557) Col8a2 (ENSJJAG00000010113) Trappc3 (ENSJJAG00000021017) Map7d1 (ENSJJAG00000018805) #22 ENSJJAG00000024064 #23 ENSJJAG00000013087 #24 Eva1b (ENSJJAG00000000205) ##25 Stk40 (ENSJJAG00000013773) #26 Oscp1 (ENSJJAG00000023834) #27 Mrps15 (ENSJJAG00000022198) #29 Csf3r (ENSJJAG00000017669) #30 Grik3 (ENSJJAG00000017762) #31 Zc3h12a (ENSJJAG00000004252) #32 ENSJJAG00000013630 ENSJJAG00000000604 Snip1 (ENSJJAG00000023710) #20 Dnali1 (ENSJJAG00000002274) #19 Gnl2 (ENSJJAG00000010798) #18 Rspo1 (ENSJJAG00000001617) #17 Muroidea ANCESTRAL SPECIES 3 ENSGT00940000159550 ENSGT00940000157613 ENSGT00940000168628 ENSGT00390000013601 ENSGT00950000182848.c.b.b.a ENSGT00640000091536 ENSGT00390000001867 ENSGT00390000012738 ENSGT00940000158729 ENSGT00940000158568 ENSGT00940000155256 ENSGT00950000182894.D ENSGT00390000015369 ENSGT00940000154317.a.a ENSGT00390000003880.b.a ENSGT00950000182941.a.a.b #22 ENSGT00950000183163.a.a #23 ENSGT00940000160627 #24 ENSGT00940000154096.b.b.b.b.a ##25 ENSGT00950000182986.b #26 ENSGT00510000048364 ENSGT00390000004808 #27 ENSGT00390000001737 #29 ENSGT00940000158915 #30 ENSGT00940000159465 #31 ENSGT00940000155107.a.a #32 ENSGT00390000015257 ENSGT00940000156553 #20 ENSGT00390000003012 #19 ENSGT00810000125524 #18 ENSGT00940000158871 #17 Upper Galilee mountains blind mole rat MODERN SPECIES 775 Zmym4 (ENSNGAG00000004986) ENSNGAG00000013255 ENSNGAG00000019339 Ncdn (ENSNGAG00000016923) Tfap2e (ENSNGAG00000020679) Psmb2 (ENSNGAG00000002741) 5730409E04Rik (ENSNGAG00000004304) Clspn (ENSNGAG00000017502) Ago4 (ENSNGAG00000020544) Ago1 (ENSNGAG00000017448) Ago3 (ENSNGAG00000012607) Tekt2 (ENSNGAG00000015353) Adprs (ENSNGAG00000015743) Col8a2 (ENSNGAG00000017271) Trappc3 (ENSNGAG00000017785) Map7d1 (ENSNGAG00000019773) #22 Thrap3 (ENSNGAG00000010876) #23 Sh3d21 (ENSNGAG00000013731) #24 Eva1b (ENSNGAG00000021220) ##25 Stk40 (ENSNGAG00000021449) #26 Lsm10 (ENSNGAG00000015011) Oscp1 (ENSNGAG00000015958) #27 Mrps15 (ENSNGAG00000018718) #29 Csf3r (ENSNGAG00000020143) #30 Muroidea_A ANCESTRAL SPECIES 3 ENSGT00940000159550 ENSGT00940000157613 ENSGT00940000168628 ENSGT00390000013601 ENSGT00950000182848.c.b.b.a ENSGT00640000091536 ENSGT00390000001867 ENSGT00390000012738 ENSGT00940000158729 ENSGT00940000158568 ENSGT00940000155256 ENSGT00950000182894.D ENSGT00390000015369 ENSGT00940000154317.a.a ENSGT00390000003880.b.a ENSGT00950000182941.a.a.b #22 ENSGT00950000183163.a.a #23 ENSGT00940000160627 #24 ENSGT00940000154096.b.b.b.b.a ##25 ENSGT00950000182986.b #26 ENSGT00510000048364 ENSGT00390000004808 #27 ENSGT00390000001737 #29 ENSGT00940000158915 #30 ENSGT00940000159465 #31 ENSGT00940000155107.a.a #32 ENSGT00390000015257 ENSGT00940000156553 #20 ENSGT00390000003012 #19 ENSGT00810000125524 #18 ENSGT00940000158871 #17 Murinae ANCESTRAL SPECIES 2 ENSGT00940000156221 ENSGT00940000159550 ENSGT00940000157613 ENSGT00390000013601 ENSGT00950000182848.c.b.b.a ENSGT00640000091536 ENSGT00390000001867 ENSGT00390000012738 ENSGT00940000158729 ENSGT00940000158568 ENSGT00940000155256 ENSGT00950000182894.D ENSGT00390000015369 ENSGT00940000154317.a.a ENSGT00390000003880.b.a ENSGT00950000182941.a.a.b #22 ENSGT00950000183163.a.a #23 ENSGT00940000160627 #24 ENSGT00940000154096.b.b.b.b.a ##25 ENSGT00950000182986.b #26 ENSGT00510000048364 ENSGT00390000004808 #27 ENSGT00390000001737 #29 ENSGT00940000158915 #30 ENSGT00940000159465 #31 ENSGT00940000155107.a.a #32 ENSGT00390000015257 ENSGT00940000156553 #20 ENSGT00390000003012 #19 ENSGT00810000125524 #18 ENSGT00940000158871 #17 Mus ANCESTRAL SPECIES 3 ENSGT00940000156221 ENSGT00940000159550 ENSGT00940000157613 ENSGT00390000013601 ENSGT00950000182848.c.b.b.a ENSGT00640000091536 ENSGT00390000001867 ENSGT00390000012738 ENSGT00940000158729 ENSGT00940000158568 ENSGT00940000155256 ENSGT00950000182894.D ENSGT00390000015369 ENSGT00940000154317.a.a ENSGT00390000003880.b.a ENSGT00950000182941.a.a.b #22 ENSGT00950000183163.a.a #23 ENSGT00940000160627 #24 ENSGT00940000154096.b.b.b.b.a ##25 ENSGT00950000182986.b #26 ENSGT00510000048364 ENSGT00390000004808 #27 ENSGT00390000001737 #29 ENSGT00940000158915 #30 ENSGT00940000159465 #31 ENSGT00940000155107.a.a #32 ENSGT00390000015257 ENSGT00940000156553 #20 ENSGT00390000003012 #19 ENSGT00810000125524 #18 ENSGT00940000158871 #17 Mus_A ANCESTRAL SPECIES 3 ENSGT00940000156221 ENSGT00940000159550 ENSGT00940000157613 ENSGT00390000013601 ENSGT00950000182848.c.b.b.a ENSGT00640000091536 ENSGT00390000001867 ENSGT00390000012738 ENSGT00940000158729 ENSGT00940000158568 ENSGT00940000155256 ENSGT00950000182894.D ENSGT00390000015369 ENSGT00940000154317.a.a ENSGT00390000003880.b.a ENSGT00950000182941.a.a.b #22 ENSGT00950000183163.a.a.f #23 ENSGT00940000160627 #24 ENSGT00940000154096.b.b.b.b.a ##25 ENSGT00950000182986.b #26 ENSGT00510000048364 ENSGT00390000004808 #27 ENSGT00390000001737 #29 ENSGT00940000158915 #30 ENSGT00940000159465 #31 ENSGT00940000155107.a.a #32 ENSGT00390000015257 ENSGT00940000156553 #20 ENSGT00390000003012 #19 ENSGT00810000125524 #18 ENSGT00940000158871 #17 Mus_B ANCESTRAL SPECIES 5 ENSGT00940000156221 ENSGT00940000159550 ENSGT00940000157613 ENSGT00390000013601 ENSGT00950000182848.c.b.b.a ENSGT00640000091536 ENSGT00390000001867 ENSGT00390000012738 ENSGT00940000158729 ENSGT00940000158568 ENSGT00940000155256 ENSGT00950000182894.D ENSGT00390000015369 ENSGT00940000154317.a.a ENSGT00390000003880.b.a ENSGT00950000182941.a.a.b #22 ENSGT00950000183163.a.a.f #23 ENSGT00940000160627 #24 ENSGT00940000154096.b.b.b.b.a ##25 ENSGT00950000182986.b #26 ENSGT00510000048364 ENSGT00390000004808 #27 ENSGT00390000001737 #29 ENSGT00940000158915 #30 ENSGT00940000159465 #31 ENSGT00940000155107.a.a #32 ENSGT00390000015257 ENSGT00940000156553 #20 ENSGT00390000003012 #19 ENSGT00810000125524 #18 ENSGT00940000158871 #17 Mus_C ANCESTRAL SPECIES 2 ENSGT00940000156221 ENSGT00940000159550 ENSGT00940000157613 ENSGT00390000013601 ENSGT00950000182848.c.b.b.a ENSGT00640000091536 ENSGT00390000001867 ENSGT00390000012738 ENSGT00940000158729 ENSGT00940000158568 ENSGT00940000155256 ENSGT00950000182894.D ENSGT00390000015369 ENSGT00940000154317.a.a ENSGT00390000003880.b.a ENSGT00950000182941.a.a.b #22 ENSGT00950000183163.a.a.f #23 ENSGT00940000160627 #24 ENSGT00940000154096.b.b.b.b.a ##25 ENSGT00950000182986.b #26 ENSGT00510000048364 ENSGT00390000004808 #27 ENSGT00390000001737 #29 ENSGT00940000158915 #30 ENSGT00940000159465 #31 ENSGT00940000155107.a.a #32 ENSGT00390000015257 ENSGT00940000156553 #20 ENSGT00390000003012 #19 ENSGT00810000125524 #18 ENSGT00940000158871 #17 spretus MODERN SPECIES 13 Sfpq (MGP_SPRETEiJ_G0027466) Zmym4 (MGP_SPRETEiJ_G0027465) AU040320 (MGP_SPRETEiJ_G0027464) Ncdn (MGP_SPRETEiJ_G0027463) Tfap2e (MGP_SPRETEiJ_G0027462) Psmb2 (MGP_SPRETEiJ_G0027461) 5730409E04Rik (MGP_SPRETEiJ_G0027460) Clspn (MGP_SPRETEiJ_G0027459) Ago4 (MGP_SPRETEiJ_G0027458) Ago1 (MGP_SPRETEiJ_G0027457) Ago3 (MGP_SPRETEiJ_G0027456) Tekt2 (MGP_SPRETEiJ_G0027455) Adprs (MGP_SPRETEiJ_G0027454) Col8a2 (MGP_SPRETEiJ_G0027453) Trappc3 (MGP_SPRETEiJ_G0027452) Map7d1 (MGP_SPRETEiJ_G0027451) #22 Thrap3 (MGP_SPRETEiJ_G0027450) #23 Sh3d21 (MGP_SPRETEiJ_G0027449) #24 Eva1b (MGP_SPRETEiJ_G0027448) ##25 Stk40 (MGP_SPRETEiJ_G0027447) #26 Lsm10 (MGP_SPRETEiJ_G0027446) Oscp1 (MGP_SPRETEiJ_G0027445) #27 Mrps15 (MGP_SPRETEiJ_G0027444) #29 Csf3r (MGP_SPRETEiJ_G0027443) #30 Grik3 (MGP_SPRETEiJ_G0027442) #31 Zc3h12a (MGP_SPRETEiJ_G0027441) #32 Meaf6 (MGP_SPRETEiJ_G0027440) Snip1 (MGP_SPRETEiJ_G0027439) #20 Dnali1 (MGP_SPRETEiJ_G0027438) #19 Gnl2 (MGP_SPRETEiJ_G0027437) #18 Rspo1 (MGP_SPRETEiJ_G0027436) #17 Steppe mouse MODERN SPECIES 3362 AU040320 (ENSMSIG00000016743) Ncdn (ENSMSIG00000016728) Tfap2e (ENSMSIG00000016711) Psmb2 (ENSMSIG00000016704) ENSMSIG00000016700 5730409E04Rik (ENSMSIG00000016696) ENSMSIG00000016695 Clspn (ENSMSIG00000016630) Ago4 (ENSMSIG00000016601) Ago1 (ENSMSIG00000016559) Ago3 (ENSMSIG00000016468) Tekt2 (ENSMSIG00000016431) Adprs (ENSMSIG00000016412) Col8a2 (ENSMSIG00000016393) Trappc3 (ENSMSIG00000016379) Map7d1 (ENSMSIG00000016217) #22 Thrap3 (ENSMSIG00000016164) #23 Sh3d21 (ENSMSIG00000016082) #24 Eva1b (ENSMSIG00000016045) ##25 Stk40 (ENSMSIG00000016008) #26 Lsm10 (ENSMSIG00000016001) Oscp1 (ENSMSIG00000015894) #27 Mrps15 (ENSMSIG00000015874) #29 Csf3r (ENSMSIG00000015810) #30 Grik3 (ENSMSIG00000015725) #31 Zc3h12a (ENSMSIG00000015699) #32 Meaf6 (ENSMSIG00000015611) Snip1 (ENSMSIG00000015594) #20 ENSMSIG00000015561 #19 Gnl2 (ENSMSIG00000015516) #18 Rspo1 (ENSMSIG00000015498) #17 Mouse MODERN SPECIES 13 Sfpq (ENSMUSG00000028820) Zmym4 (ENSMUSG00000042446) AU040320 (ENSMUSG00000028830) Ncdn (ENSMUSG00000028833) Tfap2e (ENSMUSG00000042477) Psmb2 (ENSMUSG00000028837) 5730409E04Rik (ENSMUSG00000073755) Clspn (ENSMUSG00000042489) Ago4 (ENSMUSG00000042500) Ago1 (ENSMUSG00000041530) Ago3 (ENSMUSG00000028842) Tekt2 (ENSMUSG00000028845) Adprs (ENSMUSG00000042558) Col8a2 (ENSMUSG00000056174) Trappc3 (ENSMUSG00000028847) Map7d1 (ENSMUSG00000028849) #22 Thrap3 (ENSMUSG00000043962) #23 Sh3d21 (ENSMUSG00000073758) #24 Eva1b (ENSMUSG00000050212) ##25 Stk40 (ENSMUSG00000042608) #26 Lsm10 (ENSMUSG00000050188) Oscp1 (ENSMUSG00000042616) #27 Mrps15 (ENSMUSG00000028861) #29 Csf3r (ENSMUSG00000028859) #30 Grik3 (ENSMUSG00000001985) #31 Zc3h12a (ENSMUSG00000042677) #32 Meaf6 (ENSMUSG00000028863) Snip1 (ENSMUSG00000050213) #20 Dnali1 (ENSMUSG00000042707) #19 Gnl2 (ENSMUSG00000028869) #18 Rspo1 (ENSMUSG00000028871) #17 Ryukyu mouse MODERN SPECIES 13 Sfpq (MGP_CAROLIEiJ_G0026487) Zmym4 (MGP_CAROLIEiJ_G0026486) AU040320 (MGP_CAROLIEiJ_G0026485) Ncdn (MGP_CAROLIEiJ_G0026484) Tfap2e (MGP_CAROLIEiJ_G0026483) Psmb2 (MGP_CAROLIEiJ_G0026482) 5730409E04Rik (MGP_CAROLIEiJ_G0026481) MGP_CAROLIEiJ_G0026480 Ago4 (MGP_CAROLIEiJ_G0026479) Ago1 (MGP_CAROLIEiJ_G0026478) Ago3 (MGP_CAROLIEiJ_G0026477) Tekt2 (MGP_CAROLIEiJ_G0026476) Adprs (MGP_CAROLIEiJ_G0026475) Col8a2 (MGP_CAROLIEiJ_G0026474) Trappc3 (MGP_CAROLIEiJ_G0026473) Map7d1 (MGP_CAROLIEiJ_G0026472) #22 MGP_CAROLIEiJ_G0026471 #23 Sh3d21 (MGP_CAROLIEiJ_G0026470) #24 Eva1b (MGP_CAROLIEiJ_G0026469) ##25 Stk40 (MGP_CAROLIEiJ_G0026468) #26 Lsm10 (MGP_CAROLIEiJ_G0026467) Oscp1 (MGP_CAROLIEiJ_G0026466) #27 Mrps15 (MGP_CAROLIEiJ_G0026465) #29 Csf3r (MGP_CAROLIEiJ_G0026464) #30 Grik3 (MGP_CAROLIEiJ_G0026463) #31 Zc3h12a (MGP_CAROLIEiJ_G0026462) #32 Meaf6 (MGP_CAROLIEiJ_G0026461) Snip1 (MGP_CAROLIEiJ_G0026460) #20 Dnali1 (MGP_CAROLIEiJ_G0026459) #19 Gnl2 (MGP_CAROLIEiJ_G0026458) #18 Rspo1 (MGP_CAROLIEiJ_G0026457) #17 Shrew mouse MODERN SPECIES 19 Sfpq (MGP_PahariEiJ_G0028818) Zmym4 (MGP_PahariEiJ_G0028817) AU040320 (MGP_PahariEiJ_G0028816) Ncdn (MGP_PahariEiJ_G0028815) Tfap2e (MGP_PahariEiJ_G0028814) Psmb2 (MGP_PahariEiJ_G0028813) 5730409E04Rik (MGP_PahariEiJ_G0028812) Clspn (MGP_PahariEiJ_G0028811) Ago4 (MGP_PahariEiJ_G0028810) Ago1 (MGP_PahariEiJ_G0028809) Ago3 (MGP_PahariEiJ_G0028808) Tekt2 (MGP_PahariEiJ_G0028807) Adprs (MGP_PahariEiJ_G0028806) Col8a2 (MGP_PahariEiJ_G0028805) Trappc3 (MGP_PahariEiJ_G0028804) Map7d1 (MGP_PahariEiJ_G0028803) #22 MGP_PahariEiJ_G0028802 #23 MGP_PahariEiJ_G0028801 #24 Eva1b (MGP_PahariEiJ_G0028800) ##25 Stk40 (MGP_PahariEiJ_G0028799) #26 Lsm10 (MGP_PahariEiJ_G0028798) Oscp1 (MGP_PahariEiJ_G0028797) #27 Mrps15 (MGP_PahariEiJ_G0028796) #29 Csf3r (MGP_PahariEiJ_G0028795) #30 Grik3 (MGP_PahariEiJ_G0028794) #31 Zc3h12a (MGP_PahariEiJ_G0028793) #32 Meaf6 (MGP_PahariEiJ_G0028792) Snip1 (MGP_PahariEiJ_G0028791) #20 Dnali1 (MGP_PahariEiJ_G0028790) #19 Gnl2 (MGP_PahariEiJ_G0028789) #18 Rspo1 (MGP_PahariEiJ_G0028788) #17 Rat MODERN SPECIES 15 AABR07049918.1 (ENSRNOG00000029310) Zmym4 (ENSRNOG00000012397) LOC100294508 (ENSRNOG00000012204) Ncdn (ENSRNOG00000011751) Tfap2e (ENSRNOG00000027595) Psmb2 (ENSRNOG00000011463) RGD1563072 (ENSRNOG00000021609) Clspn (ENSRNOG00000011332) Ago4 (ENSRNOG00000025596) Ago1 (ENSRNOG00000055915) Ago3 (ENSRNOG00000034269) Tekt2 (ENSRNOG00000011033) Adprs (ENSRNOG00000010849) Col8a2 (ENSRNOG00000010841) Trappc3 (ENSRNOG00000010550) Map7d1 (ENSRNOG00000010237) #22 Thrap3 (ENSRNOG00000009977) #23 Sh3d21 (ENSRNOG00000024566) #24 Eva1b (ENSRNOG00000024818) ##25 Stk40 (ENSRNOG00000025679) #26 Lsm10 (ENSRNOG00000068296) Oscp1 (ENSRNOG00000026978) #27 Mrps15 (ENSRNOG00000008279) #29 Csf3r (ENSRNOG00000008759) #30 ENSRNOG00000063670 Grik3 (ENSRNOG00000008992) #31 Zc3h12a (ENSRNOG00000009131) #32 Meaf6 (ENSRNOG00000009309) Snip1 (ENSRNOG00000024889) #20 Dnali1 (ENSRNOG00000024957) #19 Gnl2 (ENSRNOG00000009430) #18 Cricetidae ANCESTRAL SPECIES 2 ENSGT00940000159550 ENSGT00940000157613 ENSGT00940000168628 ENSGT00390000013601 ENSGT00950000182848.c.b.b.a ENSGT00640000091536 ENSGT00390000001867 ENSGT00390000012738 ENSGT00940000158729 ENSGT00940000158568 ENSGT00940000155256 ENSGT00950000182894.D ENSGT00390000015369 ENSGT00940000154317.a.a ENSGT00390000003880.b.a ENSGT00950000182941.a.a.b #22 ENSGT00950000183163.a.a #23 ENSGT00940000160627 #24 ENSGT00940000154096.b.b.b.b.a ##25 ENSGT00950000182986.b #26 ENSGT00510000048364 ENSGT00390000004808 #27 ENSGT00390000001737 #29 ENSGT00940000158915 #30 ENSGT00940000159465 #31 ENSGT00940000155107.a.a #32 ENSGT00390000015257 ENSGT00940000156553 #20 ENSGT00390000003012 #19 ENSGT00810000125524 #18 ENSGT00940000158871 #17 Cricetidae_B ANCESTRAL SPECIES 2 ENSGT00940000159550 ENSGT00940000157613 ENSGT00940000168628 ENSGT00390000013601 ENSGT00950000182848.c.b.b.a ENSGT00640000091536 ENSGT00390000001867 ENSGT00390000012738 ENSGT00940000158729 ENSGT00940000158568 ENSGT00940000155256 ENSGT00950000182894.D ENSGT00390000015369 ENSGT00940000154317.a.a ENSGT00390000003880.b.a ENSGT00950000182941.a.a.b #22 ENSGT00950000183163.a.a #23 ENSGT00940000160627 #24 ENSGT00940000154096.b.b.b.b.a ##25 ENSGT00950000182986.b #26 ENSGT00510000048364 ENSGT00390000004808 #27 ENSGT00390000001737 #29 ENSGT00940000158915 #30 ENSGT00940000159465 #31 ENSGT00940000155107.a.a #32 ENSGT00390000015257 ENSGT00940000156553 #20 ENSGT00390000003012 #19 ENSGT00810000125524 #18 ENSGT00940000158871 #17 Prairie vole MODERN SPECIES 1 Zmym4 (ENSMOCG00000000547) ENSMOCG00000003001 ENSMOCG00000010938 Ncdn (ENSMOCG00000002663) Tfap2e (ENSMOCG00000008257) ENSMOCG00000003664 5730409E04Rik (ENSMOCG00000007468) Clspn (ENSMOCG00000018907) Ago4 (ENSMOCG00000005772) Ago1 (ENSMOCG00000000537) Ago3 (ENSMOCG00000020568) Tekt2 (ENSMOCG00000017440) Adprs (ENSMOCG00000019508) Col8a2 (ENSMOCG00000012957) Trappc3 (ENSMOCG00000013847) Map7d1 (ENSMOCG00000019568) #22 ENSMOCG00000005500 #23 ENSMOCG00000015795 Eva1b (ENSMOCG00000017606) ##25 Stk40 (ENSMOCG00000019033) #26 Lsm10 (ENSMOCG00000021943) Oscp1 (ENSMOCG00000001484) #27 Mrps15 (ENSMOCG00000004474) #29 Csf3r (ENSMOCG00000015592) #30 Grik3 (ENSMOCG00000009075) #31 ENSMOCG00000009417 Zc3h12a (ENSMOCG00000001899) #32 Meaf6 (ENSMOCG00000019012) Snip1 (ENSMOCG00000008716) #20 Dnali1 (ENSMOCG00000003328) #19 Gnl2 (ENSMOCG00000016365) #18 Northern American deer mouse MODERN SPECIES 11 Sfpq (ENSPEMG00000009794) Zmym4 (ENSPEMG00000022163) AU040320 (ENSPEMG00000004246) Ncdn (ENSPEMG00000013918) Tfap2e (ENSPEMG00000023893) Psmb2 (ENSPEMG00000001295) 5730409E04Rik (ENSPEMG00000029022) Clspn (ENSPEMG00000024140) ENSPEMG00000022651 Ago1 (ENSPEMG00000023313) Ago3 (ENSPEMG00000024271) Tekt2 (ENSPEMG00000007126) Adprs (ENSPEMG00000015344) Col8a2 (ENSPEMG00000030728) Trappc3 (ENSPEMG00000017774) Map7d1 (ENSPEMG00000018714) #22 Thrap3 (ENSPEMG00000023512) #23 Sh3d21 (ENSPEMG00000022518) #24 Eva1b (ENSPEMG00000017056) ##25 Stk40 (ENSPEMG00000010968) #26 Lsm10 (ENSPEMG00000029690) Oscp1 (ENSPEMG00000021248) #27 Mrps15 (ENSPEMG00000022897) #29 Csf3r (ENSPEMG00000021902) #30 Grik3 (ENSPEMG00000020816) #31 Zc3h12a (ENSPEMG00000024080) #32 Meaf6 (ENSPEMG00000023877) Snip1 (ENSPEMG00000021090) #20 Dnali1 (ENSPEMG00000020987) #19 Gnl2 (ENSPEMG00000021234) #18 Rspo1 (ENSPEMG00000021279) #17 Cricetinae ANCESTRAL SPECIES 5 ENSGT00940000156221 ENSGT00940000159550 ENSGT00940000157613 ENSGT00390000013601 ENSGT00950000182848.c.b.b.a ENSGT00640000091536 ENSGT00390000001867 ENSGT00390000012738 ENSGT00940000158729 ENSGT00940000158568 ENSGT00940000155256 ENSGT00950000182894.D ENSGT00390000015369 ENSGT00940000154317.a.a ENSGT00390000003880.b.a ENSGT00950000182941.a.a.b #22 ENSGT00950000183163.a.a #23 ENSGT00940000160627 #24 ENSGT00940000154096.b.b.b.b.a ##25 ENSGT00950000182986.b.e #26 ENSGT00950000182986.b.f #26 ENSGT00510000048364 ENSGT00390000004808 #27 ENSGT00390000001737 #29 ENSGT00940000158915 #30 ENSGT00940000159465 #31 ENSGT00940000155107.a.a #32 ENSGT00390000015257 ENSGT00940000156553 #20 ENSGT00390000003012 #19 ENSGT00810000125524 #18 Golden Hamster MODERN SPECIES 783 5730409E04Rik (ENSMAUG00000019105) Clspn (ENSMAUG00000016563) Ago4 (ENSMAUG00000021743) Ago1 (ENSMAUG00000015189) Ago3 (ENSMAUG00000010128) Tekt2 (ENSMAUG00000011830) Adprs (ENSMAUG00000017195) Col8a2 (ENSMAUG00000000665) Trappc3 (ENSMAUG00000019950) ENSMAUG00000016543 #22 Thrap3 (ENSMAUG00000019723) #23 Sh3d21 (ENSMAUG00000014506) #24 Eva1b (ENSMAUG00000010494) ##25 Stk40 (ENSMAUG00000014659) #26 Oscp1 (ENSMAUG00000004945) #27 Mrps15 (ENSMAUG00000021202) #29 Csf3r (ENSMAUG00000001404) #30 Grik3 (ENSMAUG00000018300) #31 Zc3h12a (ENSMAUG00000012893) #32 Meaf6 (ENSMAUG00000009391) Snip1 (ENSMAUG00000015995) #20 Dnali1 (ENSMAUG00000008689) #19 Gnl2 (ENSMAUG00000018529) #18 Rspo1 (ENSMAUG00000017138) #17 9930104L06Rik (ENSMAUG00000001306) Chinese hamster chok1gshd MODERN SPECIES 111 AU040320 (ENSCGRG00001012798) Ncdn (ENSCGRG00001016309) Tfap2e (ENSCGRG00001004504) Psmb2 (ENSCGRG00001009469) ENSCGRG00001003912 5730409E04Rik (ENSCGRG00001001609) Clspn (ENSCGRG00001014483) Ago4 (ENSCGRG00001002701) Ago1 (ENSCGRG00001022708) Ago3 (ENSCGRG00001024614) Tekt2 (ENSCGRG00001021518) Adprs (ENSCGRG00001023363) Col8a2 (ENSCGRG00001019144) ENSCGRG00001020476 Trappc3 (ENSCGRG00001020776) Map7d1 (ENSCGRG00001022850) #22 Thrap3 (ENSCGRG00001003105) #23 Sh3d21 (ENSCGRG00001013521) #24 Eva1b (ENSCGRG00001016486) ##25 ENSCGRG00001000587 #26 ENSCGRG00001004317 Oscp1 (ENSCGRG00001012967) #27 Mrps15 (ENSCGRG00001019050) #29 Csf3r (ENSCGRG00001021810) #30 Grik3 (ENSCGRG00001012192) #31 Zc3h12a (ENSCGRG00001015497) #32 Meaf6 (ENSCGRG00001006760) Snip1 (ENSCGRG00001010414) #20 Dnali1 (ENSCGRG00001012511) #19 Gnl2 (ENSCGRG00001016733) #18 Rspo1 (ENSCGRG00001017490) #17 Lagomorpha ANCESTRAL SPECIES 36 ENSGT00940000159550 ENSGT00940000157613 ENSGT00390000013601 ENSGT00950000182848.c.b.b.a ENSGT00640000091536 ENSGT00390000001867 ENSGT00390000012738 ENSGT00940000158729 ENSGT00940000158568 ENSGT00940000155256 ENSGT00390000012030.a ENSGT00950000182894.D ENSGT00390000015369 ENSGT00940000154317.a.a ENSGT00390000003880.b.a ENSGT00950000182941.a.a.b #22 ENSGT00950000183163.a.a #23 ENSGT00940000160627 #24 ENSGT00940000168963 ENSGT00940000154096.b.b.b.b.a ##25 ENSGT00950000182986.b #26 ENSGT00510000048364 ENSGT00390000004808 #27 ENSGT00390000001737 #29 ENSGT00940000158915 #30 ENSGT00940000159465 #31 ENSGT00940000155107.a.a #32 ENSGT00390000015257 ENSGT00940000156553 #20 ENSGT00390000003012 #19 ENSGT00810000125524 #18 Pika MODERN SPECIES 5162 TEKT2 (ENSOPRG00000013852) ADPRS (ENSOPRG00000013870) COL8A2 (ENSOPRG00000013887) TRAPPC3 (ENSOPRG00000013890) ENSOPRG00000013899 #22 Rabbit MODERN SPECIES 437 NCDN (ENSOCUG00000013183) TFAP2E (ENSOCUG00000013190) PSMB2 (ENSOCUG00000013198) C1orf216 (ENSOCUG00000009123) CLSPN (ENSOCUG00000017387) AGO4 (ENSOCUG00000004076) ENSOCUG00000008679 AGO1 (ENSOCUG00000023116) AGO3 (ENSOCUG00000006255) ENSOCUG00000035817 ENSOCUG00000027798 TEKT2 (ENSOCUG00000029722) ADPRS (ENSOCUG00000011038) COL8A2 (ENSOCUG00000011042) TRAPPC3 (ENSOCUG00000011044) MAP7D1 (ENSOCUG00000001551) #22 THRAP3 (ENSOCUG00000005323) #23 ENSOCUG00000003260 #24 ENSOCUG00000002287 ##25 STK40 (ENSOCUG00000005325) #26 OSCP1 (ENSOCUG00000005337) #27 MRPS15 (ENSOCUG00000005675) #29 CSF3R (ENSOCUG00000011231) #30 GRIK3 (ENSOCUG00000005581) #31 ZC3H12A (ENSOCUG00000010856) #32 MEAF6 (ENSOCUG00000010862) SNIP1 (ENSOCUG00000010867) #20 DNALI1 (ENSOCUG00000010871) #19 GNL2 (ENSOCUG00000010877) #18 ENSOCUG00000010888 #17 ENSOCUG00000021550 Platypus MODERN SPECIES 7 SFPQ (ENSOANG00000047356) ZMYM4 (ENSOANG00000010569) ENSOANG00000049345 ENSOANG00000010567 NCDN (ENSOANG00000047629) TFAP2E (ENSOANG00000013427) PSMB2 (ENSOANG00000013424) ENSOANG00000002084 AGO4 (ENSOANG00000002082) AGO1 (ENSOANG00000002080) AGO3 (ENSOANG00000002078) TEKT2 (ENSOANG00000002075) ADPRS (ENSOANG00000038562) ENSOANG00000050098 TRAPPC3 (ENSOANG00000002072) MAP7D1 (ENSOANG00000036062) #22 THRAP3 (ENSOANG00000002070) #23 EVA1B (ENSOANG00000038945) ##25 STK40 (ENSOANG00000002067) #26 ENSOANG00000042771 OSCP1 (ENSOANG00000002064) #27 MRPS15 (ENSOANG00000042130) #29 ENSOANG00000002062 #30 GRIK3 (ENSOANG00000002061) #31 ZC3H12A (ENSOANG00000002060) #32 MEAF6 (ENSOANG00000002059) SNIP1 (ENSOANG00000036482) #20 DNALI1 (ENSOANG00000002058) #19 GNL2 (ENSOANG00000002057) #18 RSPO1 (ENSOANG00000002054) #17 ENSOANG00000002053 Anura ANCESTRAL SPECIES 132 ENSGT00940000159550 ENSGT00940000157613 ENSGT00390000013601 ENSGT00950000182848.c.b.b.a ENSGT00640000091536 ENSGT00390000001867 ENSGT00390000012738 ENSGT00940000158729 ENSGT00940000158568 ENSGT00940000155256 ENSGT00950000182894.D ENSGT00390000015369 ENSGT00940000154317.a.a ENSGT00390000003880.b.a ENSGT00940000164972 ENSGT00950000182941.a.a.b #22 ENSGT00950000183163.a.a #23 ENSGT00940000160627 #24 ENSGT00940000158915 #30 ENSGT00390000001737 #29 ENSGT00390000004808 #27 ENSGT00510000048364 ENSGT00950000182986.b #26 ENSGT00940000154096.b.b.b.b.b #25 Leishan spiny toad MODERN SPECIES 5 SNIP1 (ENSLLEG00000002127) #20 ENSLLEG00000002120 ENSLLEG00000002106 RSPO1 (ENSLLEG00000002099) #17 GNL2 (ENSLLEG00000001992) #18 ENSLLEG00000001946 ENSLLEG00000001934 ENSLLEG00000001930 ENSLLEG00000001896 ENSLLEG00000001882 COL8A2 (ENSLLEG00000001867) TRAPPC3 (ENSLLEG00000001844) ENSLLEG00000001831 ENSLLEG00000001791 ENSLLEG00000001767 MAP7D1 (ENSLLEG00000001739) #22 ENSLLEG00000001718 THRAP3 (ENSLLEG00000001669) #23 ENSLLEG00000001645 ENSLLEG00000001593 #24 ENSLLEG00000001571 CSF3R (ENSLLEG00000001535) #30 MRPS15 (ENSLLEG00000001489) #29 OSCP1 (ENSLLEG00000001452) #27 ENSLLEG00000001440 LSM10 (ENSLLEG00000001424) STK40 (ENSLLEG00000001376) #26 ENSLLEG00000001354 #25 ENSLLEG00000001334 ENSLLEG00000001308 ENSLLEG00000001154 Frog MODERN SPECIES 2 zmym4 (ENSXETG00000009675) kiaa0319l (ENSXETG00000039085) ncdn (ENSXETG00000009669) tfap2e (ENSXETG00000027719) c1orf216 (ENSXETG00000009667) ago4 (ENSXETG00000009664) clspn (ENSXETG00000009662) psmb2 (ENSXETG00000009668) ago1 (ENSXETG00000004364) ago3 (ENSXETG00000042716) tekt2 (ENSXETG00000004373) adprs (ENSXETG00000004374) col8a2 (ENSXETG00000004376) trappc3 (ENSXETG00000004378) ENSXETG00000004379 map7d1 (ENSXETG00000004382) #22 ENSXETG00000047207 thrap3 (ENSXETG00000003925) #23 sh3d21 (ENSXETG00000030848) #24 csf3r (ENSXETG00000003916) #30 zbtb8b (ENSXETG00000003914) nipal3 (ENSXETG00000003907) stpg1 (ENSXETG00000031811) grhl3 (ENSXETG00000003899) cyp4f2 (ENSXETG00000027109) ENSXETG00000037297 ifnlr1 (ENSXETG00000031947) il22ra1 (ENSXETG00000048975) myom3 (ENSXETG00000005275) XB5907626 [provisional:fabp1] (ENSXETG00000005274) srsf10 (ENSXETG00000036317) Coelacanth MODERN SPECIES 249 KIAA0319L (ENSLACG00000015470) NCDN (ENSLACG00000015791) TFAP2E (ENSLACG00000015883) PSMB2 (ENSLACG00000016163) C1orf216 (ENSLACG00000016550) CLSPN (ENSLACG00000016826) AGO4 (ENSLACG00000016888) AGO1 (ENSLACG00000017009) TEKT2 (ENSLACG00000017301) ADPRS (ENSLACG00000017349) ENSLACG00000017370 COL8A2 (ENSLACG00000017396) TRAPPC3 (ENSLACG00000017830) angpt2b (ENSLACG00000017925) ENSLACG00000017969 MAP7D1 (ENSLACG00000018102) #22 THRAP3 (ENSLACG00000018229) #23 ENSLACG00000018225 eva1ba (ENSLACG00000022189) #25 CHD1 (ENSLACG00000018415) ENSLACG00000018455 RGMB (ENSLACG00000018463)