Euteleostomi ANCESTRAL SPECIES 58 ENSGT00940000160514 ENSGT00390000000360 #9 ENSGT00390000012647 ENSGT00940000154783 ENSGT00940000160294 ENSGT00940000159444 ENSGT00940000164188 ENSGT00940000158744 ENSGT00510000047092 ENSGT00530000063582.a #18 ENSGT00950000183055.a.b #21 ENSGT00940000165106 ENSGT01100000263512.a.a.a.a ENSGT00550000075160 ENSGT00510000047733 #22 ENSGT00390000017860.a.a ENSGT00530000063872.A ENSGT00940000158229 ENSGT00940000157209 ENSGT00390000001134.b ENSGT00950000182994.A ENSGT00390000000141 ENSGT00940000159611 ENSGT00520000059318 ENSGT00530000063666.a ENSGT00940000164237 ENSGT00390000008591 ENSGT00940000159242 ENSGT00940000161429 ENSGT00390000017581.a Sarcopterygii ANCESTRAL SPECIES 333 ENSGT00940000158744 ENSGT00510000047092 ENSGT00530000063582.a #18 ENSGT00950000183055.a.b #21 ENSGT00940000165106 ENSGT01100000263512.a.a.a.a ENSGT00550000075160 ENSGT00510000047733 #22 ENSGT00390000017860.a.a ENSGT00530000063872.A ENSGT00940000158229 ENSGT00940000157209 Tetrapoda ANCESTRAL SPECIES 191 ENSGT00940000158744 ENSGT00510000047092 ENSGT00530000063582.a #18 ENSGT00950000183055.a.b #21 ENSGT00940000165106 ENSGT01100000263512.a.a.a.a ENSGT00550000075160 ENSGT00510000047733 #22 ENSGT00390000017860.a.a ENSGT00530000063872.A ENSGT00940000158229 ENSGT00940000157209 Amniota ANCESTRAL SPECIES 48 ENSGT00940000161397 #15 ENSGT00940000162502 ENSGT00530000063484.b.a ENSGT00390000000360 #9 ENSGT00390000006885 #8 ENSGT00390000012647 ENSGT00940000154783 ENSGT00940000160294 ENSGT00940000158744 ENSGT00510000047092 ENSGT00530000063582.a #18 ENSGT00950000183055.a.b #21 ENSGT00940000165106 ENSGT01100000263512.a.a.a.a ENSGT00550000075160 ENSGT00510000047733 #22 ENSGT00390000017860.a.a ENSGT00530000063872.A ENSGT00940000158229 ENSGT00940000157209.jb ENSGT00390000003706.a.b.a ENSGT00390000015364.a.b.a ENSGT00390000015364.a.b.b ENSGT00390000015700.b ENSGT00940000153941.a.b ENSGT00940000166719 ENSGT00940000163673 ENSGT00940000164016 ENSGT00940000161062 ENSGT00510000046908.b ENSGT01030000234752 Mammalia ANCESTRAL SPECIES 54 ENSGT00940000161397 #15 ENSGT00940000162502 ENSGT00530000063484.b.a ENSGT00390000000360 #9 ENSGT00390000006885.a #8 ENSGT00390000012647 ENSGT00940000154783 ENSGT00940000160294 ENSGT00940000158744 ENSGT00510000047092 ENSGT00530000063582.a #18 ENSGT00950000183055.a.b #21 ENSGT00940000165106 ENSGT01100000263512.a.a.a.a ENSGT00550000075160 ENSGT00510000047733 #22 ENSGT00390000017860.a.a ENSGT00530000063872.A ENSGT00940000158229 ENSGT00940000157209.jb ENSGT00390000003706.a.b.a ENSGT00390000015364.a.b.a ENSGT00390000015364.a.b.b ENSGT00390000015700.b ENSGT00940000153941.a.b ENSGT00940000166719 ENSGT00940000163673 ENSGT00940000164016 ENSGT00940000161062 ENSGT00510000046908.b ENSGT01030000234752 Theria ANCESTRAL SPECIES 34 ENSGT00530000063582.a #18 ENSGT00950000183055.a.b #21 ENSGT00510000047733 #22 ENSGT00390000017860.a.a ENSGT00530000063872.A ENSGT00940000158229 ENSGT00940000157209.jb ENSGT00940000164188 ENSGT00940000159444 ENSGT00940000161201 ENSGT00940000155374 ENSGT00940000160946 ENSGT00940000164304 ENSGT00390000017980 ENSGT00940000160515 ENSGT00940000153299.d ENSGT00940000154344.a ENSGT00940000153669.b Eutheria ANCESTRAL SPECIES 16 ENSGT00940000158744 ENSGT00390000005685 ENSGT00390000016992 #17 ENSGT00940000160294 ENSGT00940000154783 ENSGT00390000012647 ENSGT00390000006885.a #8 ENSGT00390000000360 #9 ENSGT00950000183068.a.a #12 ENSGT00390000018904 #13 ENSGT00940000158132 #14 ENSGT00940000161397 #15 ENSGT00940000163020 #16 ENSGT00530000063582.a #18 ENSGT00950000183055.a.b #21 ENSGT00510000047733 #22 ENSGT00530000063872.A ENSGT00940000158229 ENSGT00940000155935 ENSGT00940000162167 ENSGT00940000164188 ENSGT00940000159444 ENSGT00940000154972 ENSGT00940000161201 ENSGT00940000155374 ENSGT00390000006832 ENSGT00940000160946 ENSGT00390000017980 ENSGT00940000160515 ENSGT00940000153299.d ENSGT00940000154344.a Boreoeutheria ANCESTRAL SPECIES 11 ENSGT00940000160294 ENSGT00940000154783.e.b ENSGT00940000163020 #16 ENSGT00390000016992 #17 ENSGT00940000154783.f ENSGT00390000012647 ENSGT00390000006885.a #8 ENSGT00390000000360.r ##9 ENSGT00950000183068.a.a #12 ENSGT00390000018904 #13 ENSGT00910000148519 ENSGT00940000158132 #14 ENSGT00940000161397 #15 ENSGT00530000063582.a #18 ENSGT00950000183055.a.b #21 ENSGT00510000047733 #22 Euarchontoglires ANCESTRAL SPECIES 11 ENSGT00940000160294 ENSGT00940000154783.e.b ENSGT00940000163020 #16 ENSGT00390000016992 #17 ENSGT00940000154783.f ENSGT00390000012647 ENSGT00390000006885.a #8 ENSGT00390000000360.r.b ##9 ENSGT00950000183068.a.a #12 ENSGT00390000018904 #13 ENSGT00910000148519 ENSGT00940000158132 #14 ENSGT00940000161397 #15 ENSGT00530000063582.a #18 ENSGT00950000183055.a.b #21 ENSGT00510000047733 #22 Primates ANCESTRAL SPECIES 23 ENSGT00940000154783.e.b ENSGT00940000163020 #16 ENSGT00390000016992 #17 ENSGT00940000154783.f ENSGT00390000012647 ENSGT00390000006885.a #8 ENSGT00390000000360.q.a ##9 ENSGT00390000000360.r.a.b ##9 ENSGT00950000183068.a.a #12 ENSGT00390000018904 #13 ENSGT00910000148519 ENSGT00940000158132 #14 ENSGT00940000161397 #15 ENSGT00530000063582.a #18 ENSGT00950000183055.a.b #21 ENSGT00510000047733 #22 Haplorrhini ANCESTRAL SPECIES 33 ENSGT00950000182808.b.b ENSGT00950000183004.a.a.a.b ENSGT00530000063435.a ENSGT00530000063808.a ENSGT00410000025802.h ENSGT00940000159803 ENSGT00510000047092 ENSGT00940000158744 ENSGT00390000005685 ENSGT00940000160294 ENSGT00940000154783.f ENSGT00940000163020 #16 ENSGT00390000016992 #17 ENSGT00530000063582.a #18 ENSGT00950000183055.a.b #21 ENSGT00510000047733 #22 ENSGT00940000154783.e.b ENSGT00390000012647 ENSGT00390000006885.a #8 ENSGT00390000000360.q.a ##9 ENSGT00950000183068.a.a #12 ENSGT00390000018904 #13 ENSGT00910000148519 ENSGT00940000158132 #14 ENSGT00940000161397 #15 Simiiformes ANCESTRAL SPECIES 9 ENSGT00390000005685 ENSGT00940000160294 ENSGT00940000163020 #16 ENSGT00940000154783.e.b ENSGT00390000012647 ENSGT00390000006885.a #8 ENSGT00390000000360.q.a ##9 ENSGT00950000183068.a.a #12 ENSGT00390000018904 #13 ENSGT00910000148519 ENSGT00940000158132 #14 ENSGT00940000161397 #15 ENSGT00390000016992 #17 ENSGT00530000063582.a #18 ENSGT00950000183055.a.b #21 ENSGT00510000047733 #22 ENSGT00550000075071 ENSGT00510000049125 #23 Catarrhini ANCESTRAL SPECIES 12 ENSGT00390000005685 ENSGT00940000160294 ENSGT00940000163020 #16 ENSGT00390000016992 #17 ENSGT00940000154783.e.b ENSGT00390000012647 ENSGT00390000006885.a #8 ENSGT00390000000360.q.a ##9 ENSGT00950000183068.a.a #12 ENSGT00390000018904 #13 ENSGT00910000148519 ENSGT00940000158132 #14 ENSGT00940000161397 #15 ENSGT00530000063582.a #18 ENSGT00950000183055.a.b #21 ENSGT00510000047733 #22 ENSGT00550000075071 ENSGT00510000049125 #23 Cercopithecidae ANCESTRAL SPECIES 37 ENSGT00390000005685 ENSGT00940000160294 ENSGT00940000163020 #16 ENSGT00390000016992 #17 ENSGT00940000154783.e.b ENSGT00390000012647 ENSGT00390000006885.a #8 ENSGT00390000000360.q.a ##9 ENSGT00950000183068.a.a #12 ENSGT00390000018904 #13 ENSGT00910000148519 ENSGT00940000158132 #14 ENSGT00940000161397 #15 ENSGT00530000063582.a #18 ENSGT00950000183055.a.b #21 ENSGT00510000047733 #22 ENSGT00510000049125 #23 Cercopithecinae ANCESTRAL SPECIES 25 ENSGT00390000005685 ENSGT00940000160294 ENSGT00940000163020 #16 ENSGT00390000016992 #17 ENSGT00940000154783.e.b ENSGT00390000012647 ENSGT00390000006885.a #8 ENSGT00390000000360.q.a ##9 ENSGT00950000183068.a.a #12 ENSGT00390000018904.hb #13 ENSGT00910000148519 ENSGT00940000158132 #14 ENSGT00940000161397 #15 ENSGT00530000063582.a #18 ENSGT00950000183055.a.b #21 ENSGT00510000047733 #22 ENSGT00510000049125 #23 Cercopithecinae_a ANCESTRAL SPECIES 11 ENSGT00940000160294 ENSGT00390000000950.c.b.d.a.d ENSGT00940000154783.e.b ENSGT00390000012647 ENSGT00390000006885.a #8 ENSGT00390000000360.q.a ##9 ENSGT00950000183068.a.a #12 ENSGT00390000018904.hb #13 ENSGT00910000148519 ENSGT00940000158132 #14 ENSGT00940000161397 #15 ENSGT00940000163020 #16 ENSGT00390000016992 #17 ENSGT00530000063582.a #18 ENSGT00950000183055.a.b #21 ENSGT00510000047733 #22 ENSGT00510000049125 #23 Macaca ANCESTRAL SPECIES 13 ENSGT00940000158744 ENSGT00390000005685 ENSGT00940000160294 ENSGT00940000154783.e.b ENSGT00390000012647 ENSGT00390000006885.a #8 ENSGT00390000000360.q.a ##9 ENSGT00950000183068.a.a #12 ENSGT00390000018904.hb #13 ENSGT00940000158132 #14 ENSGT00940000161397 #15 ENSGT00940000163020 #16 ENSGT00390000016992 #17 ENSGT00530000063582.a #18 ENSGT00950000183055.a.b #21 ENSGT00510000047733 #22 ENSGT00510000049125 #23 Macaca_a ANCESTRAL SPECIES 11 ENSGT00510000047092 ENSGT00940000158744 ENSGT00390000005685 ENSGT00940000160294 ENSGT00940000154783.e.b ENSGT00390000006885.a #8 ENSGT00390000000360.q.a ##9 ENSGT00950000183068.a.a #12 ENSGT00390000018904.hb #13 ENSGT00940000158132 #14 ENSGT00940000161397 #15 ENSGT00940000163020 #16 ENSGT00390000016992 #17 ENSGT00530000063582.a #18 ENSGT00950000183055.a.b #21 ENSGT00510000047733 #22 ENSGT00510000049125 #23 Rhesus MODERN SPECIES 327 CMC4 (ENSMMUG00000050298) #7 MTCP1 (ENSMMUG00000010251) #8 BRCC3 (ENSMMUG00000010253) #9 ENSMMUG00000062127 #10 ENSMMUG00000052111 #11 ENSMMUG00000043981 #12 ENSMMUG00000015095 #13 RAB39B (ENSMMUG00000059069) #14 CLIC2 (ENSMMUG00000061009) #15 H2AB2 (ENSMMUG00000055745) #16 ENSMMUG00000058345 #17 TMLHE (ENSMMUG00000009481) #18 ENSMMUG00000061765 #19 ENSMMUG00000064879 #20 SPRY3 (ENSMMUG00000051319) #21 VAMP7 (ENSMMUG00000002015) #22 IL9R (ENSMMUG00000002016) #23 ENSMMUG00000032340 #24 ENSMMUG00000063448 #25 Crab-eating macaque MODERN SPECIES 175 ENSMFAG00000060522 F8 (ENSMFAG00000039948) FUNDC2 (ENSMFAG00000038031) ENSMFAG00000045993 MTCP1 (ENSMFAG00000052287) #8 BRCC3 (ENSMFAG00000031106) ##9 ENSMFAG00000056611 #12 VBP1 (ENSMFAG00000032032) #13 ENSMFAG00000058523 ENSMFAG00000050091 ENSMFAG00000064770 RAB39B (ENSMFAG00000036188) #14 ENSMFAG00000032659 #15 SPRY3 (ENSMFAG00000014963) #21 ENSMFAG00000053989 VAMP7 (ENSMFAG00000031038) #22 IL9R (ENSMFAG00000000235) #23 Pig-tailed macaque MODERN SPECIES 407 ENSMNEG00000015678 TMLHE (ENSMNEG00000029100) #18 SPRY3 (ENSMNEG00000037832) #21 VAMP7 (ENSMNEG00000024526) #22 IL9R (ENSMNEG00000029519) #23 Cercopithecinae_b ANCESTRAL SPECIES 66 ENSGT00940000159803 ENSGT00510000047092 ENSGT00940000158744 ENSGT00390000005685 ENSGT00940000160294 ENSGT00390000000950.c.b.d.a.d ENSGT00940000154783.e.b ENSGT00390000012647 ENSGT00390000006885.a #8 ENSGT00390000000360.q.a ##9 ENSGT00390000018904.hb #13 ENSGT00910000148519 ENSGT00940000158132 #14 ENSGT00940000161397 #15 ENSGT00530000063582.a #18 ENSGT00510000047733 #22 ENSGT00510000049125 #23 Olive baboon MODERN SPECIES 792 FLNA (ENSPANG00000025614) ENSPANG00000046902 SMIM9 (ENSPANG00000014914) MPP1 (ENSPANG00000013144) DKC1 (ENSPANG00000011978) GAB3 (ENSPANG00000004006) F8 (ENSPANG00000010602) FUNDC2 (ENSPANG00000004381) CMC4 (ENSPANG00000017783) MTCP1 (ENSPANG00000012244) #8 BRCC3 (ENSPANG00000010904) ##9 RAB39B (ENSPANG00000008960) #14 TMLHE (ENSPANG00000024415) #18 CLIC2 (ENSPANG00000008414) #15 VBP1 (ENSPANG00000029954) #13 VAMP7 (ENSPANG00000015780) #22 IL9R (ENSPANG00000004380) #23 Cercopithecinae_d ANCESTRAL SPECIES 265 ENSGT00530000063582.a #18 ENSGT00510000047733 #22 ENSGT00510000049125 #23 Sooty mangabey MODERN SPECIES 476 TMLHE (ENSCATG00000021587) #18 VAMP7 (ENSCATG00000031777) #22 IL9R (ENSCATG00000029289) #23 Drill MODERN SPECIES 1378 VAMP7 (ENSMLEG00000025289) #22 Vervet Monkey MODERN SPECIES 203 MPP1 (ENSCSAG00000006698) SMIM9 (ENSCSAG00000006693) F8 (ENSCSAG00000006668) ENSCSAG00000000521 #16 ENSCSAG00000000520 #16 ENSCSAG00000000519 #17 FUNDC2 (ENSCSAG00000006563) CMC4 (ENSCSAG00000006553) MTCP1 (ENSCSAG00000006547) #8 BRCC3 (ENSCSAG00000006538) ##9 ENSCSAG00000006524 #13 RAB39B (ENSCSAG00000006507) #14 CLIC2 (ENSCSAG00000006505) #15 TMLHE (ENSCSAG00000006499) #18 SPRY3 (ENSCSAG00000000518) #21 VAMP7 (ENSCSAG00000006492) #22 IL9R (ENSCSAG00000006485) #23 Rhinopithecus ANCESTRAL SPECIES 943 ENSGT00510000047733 #22 ENSGT00510000049125 #23 Golden snub-nosed monkey MODERN SPECIES 297 VAMP7 (ENSRROG00000022660) #22 Black snub-nosed monkey MODERN SPECIES 450 VAMP7 (ENSRBIG00000033072) #22 IL9R (ENSRBIG00000025291) #23 Hominoidea ANCESTRAL SPECIES 29 ENSGT00510000047092 ENSGT00940000158744 ENSGT00390000005685 ENSGT00940000160294 ENSGT00940000154783.e.b ENSGT00390000012647 ENSGT00390000006885.a #8 ENSGT00390000000360.q.a ##9 ENSGT00390000018904 #13 ENSGT00940000158132 #14 ENSGT00940000161397 #15 ENSGT00940000163020 #16 ENSGT00390000016992 #17 ENSGT00530000063582.a #18 ENSGT00950000183055.a.b #21 ENSGT00510000047733 #22 ENSGT00510000049125 #23 Gibbon MODERN SPECIES 449 DKC1 (ENSNLEG00000014323) MPP1 (ENSNLEG00000014358) ENSNLEG00000014423 ENSNLEG00000028336 SMIM9 (ENSNLEG00000014424) F8 (ENSNLEG00000014427) ENSNLEG00000018302 #17 ENSNLEG00000014443 CMC4 (ENSNLEG00000027271) MTCP1 (ENSNLEG00000014453) #8 BRCC3 (ENSNLEG00000014460) ##9 VBP1 (ENSNLEG00000014475) #13 RAB39B (ENSNLEG00000014505) #14 CLIC2 (ENSNLEG00000028091) #15 SPRY3 (ENSNLEG00000018303) #21 ENSNLEG00000014513 #22 IL9R (ENSNLEG00000014552) #23 Hominidae ANCESTRAL SPECIES 8 ENSGT00510000047092 ENSGT00940000158744 ENSGT00390000005685 ENSGT00940000160294 ENSGT00940000154783.e.b ENSGT00390000012647 ENSGT00390000006885.a #8 ENSGT00390000000360.q.a ##9 ENSGT00390000018904 #13 ENSGT00940000158132 #14 ENSGT00940000161397 #15 ENSGT00940000163020 #16 ENSGT00390000016992 #17 ENSGT00530000063582.a #18 ENSGT00950000183055.a.b #21 ENSGT00510000047733 #22 ENSGT00510000049125.d.a.a #23 Orangutan MODERN SPECIES 242 ENSPPYG00000038630 #17 FUNDC2 (ENSPPYG00000020897) CMC4 (ENSPPYG00000020898) MTCP1 (ENSPPYG00000035172) #8 BRCC3 (ENSPPYG00000020899) ##9 VBP1 (ENSPPYG00000020900) #13 RAB39B (ENSPPYG00000032989) #14 CLIC2 (ENSPPYG00000020902) #15 ENSPPYG00000037853 #16 ENSPPYG00000038438 #17 ENSPPYG00000032431 #17 ENSPPYG00000030924 #16 ENSPPYG00000033468 TMLHE (ENSPPYG00000020904) #18 SPRY3 (ENSPPYG00000020905) #21 VAMP7 (ENSPPYG00000020906) #22 ENSPPYG00000020907 #23 Homo/Pan/Gorilla group ANCESTRAL SPECIES 9 ENSGT00510000047092 ENSGT00940000158744 ENSGT00390000005685 ENSGT00940000160294 ENSGT00940000163020 #16 ENSGT00390000016992 #17 ENSGT00940000154783.e.b ENSGT00390000012647 ENSGT00390000006885.a #8 ENSGT00390000000360.q.a ##9 ENSGT00390000018904 #13 ENSGT00940000158132 #14 ENSGT00940000161397 #15 ENSGT00530000063582.a #18 ENSGT00950000183055.a.b #21 ENSGT00510000047733 #22 ENSGT00510000049125.d.a.a #23 Gorilla MODERN SPECIES 523 DKC1 (ENSGGOG00000001045) MPP1 (ENSGGOG00000001049) ENSGGOG00000025061 SMIM9 (ENSGGOG00000005354) F8 (ENSGGOG00000003600) ENSGGOG00000003617 #17 FUNDC2 (ENSGGOG00000026954) CMC4 (ENSGGOG00000011528) MTCP1 (ENSGGOG00000037091) #8 BRCC3 (ENSGGOG00000027248) ##9 VBP1 (ENSGGOG00000027061) #13 RAB39B (ENSGGOG00000005567) #14 CLIC2 (ENSGGOG00000023292) #15 ENSGGOG00000024008 #18 SPRY3 (ENSGGOG00000022101) #21 ENSGGOG00000001709 #22 ENSGGOG00000007446 #23 Homo/Pan group ANCESTRAL SPECIES 9 ENSGT00510000047092 ENSGT00940000158744 ENSGT00390000005685 ENSGT00940000160294 ENSGT00940000154783.e.b ENSGT00390000012647 ENSGT00390000006885.a #8 ENSGT00390000000360.q.a ##9 ENSGT00390000018904 #13 ENSGT00940000158132 #14 ENSGT00940000161397 #15 ENSGT00940000163020 #16 ENSGT00390000016992.cb.b #17 ENSGT00530000063582.a #18 ENSGT00950000183055.a.b #21 ENSGT00510000047733 #22 ENSGT00510000049125.c #23 Human MODERN SPECIES 1827 H2AB1 (ENSG00000274183) #16 F8A1 (ENSG00000288722) #17 FUNDC2 (ENSG00000165775) CMC4 (ENSG00000182712) MTCP1 (ENSG00000214827) #8 BRCC3 (ENSG00000185515) ##9 VBP1 (ENSG00000155959) #13 RAB39B (ENSG00000155961) #14 CLIC2 (ENSG00000155962) #15 H2AB2 (ENSG00000277858) #16 F8A2 (ENSG00000288709) #17 F8A3 (ENSG00000277150) #17 H2AB3 (ENSG00000277745) #16 TMLHE (ENSG00000185973) #18 SPRY3 (ENSG00000168939) #21 VAMP7 (ENSG00000124333) #22 IL9R (ENSG00000124334) #23 WASH6P (ENSG00000182484) Pan ANCESTRAL SPECIES 43 ENSGT00940000158744 ENSGT00390000011549.e ENSGT00390000005685 ENSGT00940000160294 ENSGT00940000163020 #16 ENSGT00390000016992.bb #17 ENSGT00940000154783.e.b ENSGT00390000012647 ENSGT00390000006885.a #8 ENSGT00390000000360.q.a ##9 ENSGT00390000018904 #13 ENSGT00940000158132 #14 ENSGT00940000161397 #15 ENSGT00530000063582.a.m #18 ENSGT00950000183055.a.b #21 ENSGT00510000047733 #22 ENSGT00510000049125.d.a.a #23 Bonobo MODERN SPECIES 369 DKC1 (ENSPPAG00000023820) MPP1 (ENSPPAG00000040588) ENSPPAG00000031767 SMIM9 (ENSPPAG00000035097) F8 (ENSPPAG00000033513) ENSPPAG00000022594 #16 FUNDC2 (ENSPPAG00000028980) CMC4 (ENSPPAG00000030202) MTCP1 (ENSPPAG00000029273) #8 BRCC3 (ENSPPAG00000039895) ##9 VBP1 (ENSPPAG00000036017) #13 RAB39B (ENSPPAG00000041186) #14 CLIC2 (ENSPPAG00000041308) #15 ENSPPAG00000037387 #18 SPRY3 (ENSPPAG00000001617) #21 ENSPPAG00000032770 #22 IL9R (ENSPPAG00000035209) #23 Chimpanzee MODERN SPECIES 972 SMIM9 (ENSPTRG00000028167) F8 (ENSPTRG00000022455) ENSPTRG00000052848 #16 ENSPTRG00000052307 #17 FUNDC2 (ENSPTRG00000044160) CMC4 (ENSPTRG00000039562) MTCP1 (ENSPTRG00000022457) #8 BRCC3 (ENSPTRG00000044491) ##9 VBP1 (ENSPTRG00000022460) #13 RAB39B (ENSPTRG00000042083) #14 CLIC2 (ENSPTRG00000022462) #15 ENSPTRG00000044564 #16 ENSPTRG00000046305 #17 ENSPTRG00000045691 #18 SPRY3 (ENSPTRG00000048381) #21 VAMP7 (ENSPTRG00000046127) #22 ENSPTRG00000007524 #23 Platyrrhini ANCESTRAL SPECIES 42 ENSGT00940000158744 ENSGT00390000005685 ENSGT00940000160294 ENSGT00940000154783.f ENSGT00390000012647.g ENSGT00390000006885.a #8 ENSGT00390000000360.q.a ##9 ENSGT00950000183068.a.a #12 ENSGT00390000018904 #13 ENSGT00940000158132 #14 ENSGT00940000161397 #15 ENSGT00390000016992 #17 ENSGT00940000163020 #16 ENSGT00530000063582.a #18 ENSGT00950000183055.a.b #21 ENSGT00510000047733 #22 ENSGT00510000049125 #23 Cebidae ANCESTRAL SPECIES 27 ENSGT00940000158744 ENSGT00390000005685 ENSGT00940000160294 ENSGT00940000154783.e.a.a.a ENSGT00390000012647.g ENSGT00390000006885.a #8 ENSGT00390000000360.q.a ##9 ENSGT00950000183068.a.a #12 ENSGT00390000018904 #13 ENSGT00940000158132 #14 ENSGT00940000161397 #15 ENSGT00390000016992 #17 ENSGT00940000163020 #16 ENSGT00530000063582.a #18 ENSGT00950000183055.a.b #21 ENSGT00510000047733 #22 ENSGT00510000049125 #23 Marmoset MODERN SPECIES 78 ENSCJAG00000076498 #16 ENSCJAG00000079192 #17 ENSCJAG00000004287 CMC4 (ENSCJAG00000078864) MTCP1 (ENSCJAG00000042284) #8 BRCC3 (ENSCJAG00000004308) ##9 ENSCJAG00000085645 #12 VBP1 (ENSCJAG00000004338) #13 RAB39B (ENSCJAG00000064579) #14 CLIC2 (ENSCJAG00000004362) #15 ENSCJAG00000073788 #17 ENSCJAG00000071739 #16 TMLHE (ENSCJAG00000021685) #18 ENSCJAG00000082014 ##25 ENSCJAG00000073952 ##25 VAMP7 (ENSCJAG00000047535) #22 IL9R (ENSCJAG00000008510) #23 ENSCJAG00000071287 Cebidae_a ANCESTRAL SPECIES 78 ENSGT00940000159803 ENSGT00510000047092 ENSGT00940000158744 ENSGT00390000005685 ENSGT00940000160294 ENSGT00940000154783.e.a.a.a ENSGT00390000012647.g ENSGT00390000006885.a #8 ENSGT00390000000360.q.a ##9 ENSGT00390000018904 #13 ENSGT00940000158132 #14 ENSGT00940000161397 #15 ENSGT00390000016992 #17 ENSGT00530000063582.a #18 ENSGT00950000183055.a.b #21 ENSGT00510000047733 #22 ENSGT00510000049125 #23 Capuchin MODERN SPECIES 574 FUNDC2 (ENSCCAG00000019713) MTCP1 (ENSCCAG00000023625) #8 BRCC3 (ENSCCAG00000033753) ##9 VBP1 (ENSCCAG00000022791) #13 RAB39B (ENSCCAG00000030469) #14 CLIC2 (ENSCCAG00000019952) #15 ENSCCAG00000031797 #17 TMLHE (ENSCCAG00000028430) #18 SPRY3 (ENSCCAG00000031944) #21 VAMP7 (ENSCCAG00000023295) #22 IL9R (ENSCCAG00000028031) #23 Bolivian squirrel monkey DUPLICATION Bolivian squirrel monkey MODERN SPECIES 46 NEUROD1 (ENSSBOG00000015587) ITPRID2 (ENSSBOG00000013272) PPP1R1C (ENSSBOG00000032708) ENSSBOG00000030558 PDE1A (ENSSBOG00000034194) ENSSBOG00000035539 DNAJC10 (ENSSBOG00000020962) FRZB (ENSSBOG00000023256) NCKAP1 (ENSSBOG00000031170) DUSP19 (ENSSBOG00000029076) NUP35 (ENSSBOG00000018676) ENSSBOG00000026419 ZNF804A (ENSSBOG00000025383) TMLHE (ENSSBOG00000033577) #18 SPRY3 (ENSSBOG00000011067) #21 ENSSBOG00000026268 #22 IL9R (ENSSBOG00000029398) #23 ENSSBOG00000023734 ENSSBOG00000031371 ENSSBOG00000022772 Bolivian squirrel monkey MODERN SPECIES 43 ENSSBOG00000028612 SV2C (ENSSBOG00000034394) ENSSBOG00000032555 F2RL2 (ENSSBOG00000026294) IQGAP2 (ENSSBOG00000020078) F2R (ENSSBOG00000033584) ENSSBOG00000027642 F2RL1 (ENSSBOG00000028683) S100Z (ENSSBOG00000016013) ENSSBOG00000013156 CRHBP (ENSSBOG00000024077) AGGF1 (ENSSBOG00000019539) ENSSBOG00000032840 PDE8B (ENSSBOG00000020456) WDR41 (ENSSBOG00000019142) ENSSBOG00000021924 #22 OTP (ENSSBOG00000035833) TBCA (ENSSBOG00000031001) AP3B1 (ENSSBOG00000029511) ENSSBOG00000034436 SCAMP1 (ENSSBOG00000029488) LHFPL2 (ENSSBOG00000033083) ARSB (ENSSBOG00000031483) ENSSBOG00000011617 DMGDH (ENSSBOG00000035140) BHMT (ENSSBOG00000030724) JMY (ENSSBOG00000001249) ENSSBOG00000022728 HOMER1 (ENSSBOG00000030696) TENT2 (ENSSBOG00000025595) CMYA5 (ENSSBOG00000035707) Tarsier MODERN SPECIES 2488 VAMP7 (ENSTSYG00000036722) #22 Strepsirrhini ANCESTRAL SPECIES 55 ENSGT00390000005685 ENSGT00940000160294 ENSGT00940000163020 #16 ENSGT00390000016992 #17 ENSGT00940000154783.f ENSGT00390000012647 ENSGT00390000006885.a #8 ENSGT00390000000360.r.b ##9 ENSGT00390000000360.r.a.b ##9 ENSGT00950000183068.a.a #12 ENSGT00390000018904 #13 ENSGT00940000158132 #14 ENSGT00940000161397 #15 ENSGT00530000063582.a #18 ENSGT00950000183055.a.b #21 ENSGT00510000047733 #22 Bushbaby MODERN SPECIES 374 GAB3 (ENSOGAG00000010477) DKC1 (ENSOGAG00000003399) MPP1 (ENSOGAG00000003402) F8 (ENSOGAG00000005241) ENSOGAG00000034494 #17 FUNDC2 (ENSOGAG00000033461) CMC4 (ENSOGAG00000027720) MTCP1 (ENSOGAG00000005252) #8 ENSOGAG00000005255 ##9 ENSOGAG00000029432 #12 VBP1 (ENSOGAG00000016566) #13 RAB39B (ENSOGAG00000025424) #14 ENSOGAG00000034308 #17 SPRY3 (ENSOGAG00000001824) #21 VAMP7 (ENSOGAG00000030896) #22 Lemuriformes ANCESTRAL SPECIES 130 ENSGT00530000063582.a #18 ENSGT00950000183055.a.b #21 ENSGT00510000047733 #22 Mouse lemur MODERN SPECIES 169 ENSMICG00000010404 GPR143 (ENSMICG00000010413) SHROOM2 (ENSMICG00000045523) ENSMICG00000007978 ENSMICG00000014241 SLITRK2 (ENSMICG00000003910) ENSMICG00000027545 ENSMICG00000030858 ENSMICG00000033128 ENSMICG00000034786 ENSMICG00000035061 SLITRK4 (ENSMICG00000036015) ENSMICG00000034247 ENSMICG00000017029 LDOC1 (ENSMICG00000034780) VAMP7 (ENSMICG00000001581) #22 ENSMICG00000032959 ENSMICG00000028484 ARHGEF9 (ENSMICG00000007135) ENSMICG00000043875 ENSMICG00000027801 ENSMICG00000036449 ENSMICG00000030636 ENSMICG00000036554 TMLHE (ENSMICG00000010663) #18 RAB39B (ENSMICG00000044410) #14 VBP1 (ENSMICG00000033175) #13 BRCC3 (ENSMICG00000036150) ##9 MTCP1 (ENSMICG00000037190) #8 CMC4 (ENSMICG00000046262) ENSMICG00000028940 Lemuriformes_a ANCESTRAL SPECIES 316 ENSGT00530000063582.a #18 ENSGT00950000183055.a.b #21 ENSGT00510000047733 #22 Coquerels sifaka MODERN SPECIES 888 TMLHE (ENSPCOG00000021518) #18 SPRY3 (ENSPCOG00000000267) #21 VAMP7 (ENSPCOG00000012613) #22 Greater bamboo lemur DUPLICATION Greater bamboo lemur MODERN SPECIES 132 PWWP2A (ENSPSMG00000006002) CCNJL (ENSPSMG00000005972) C1QTNF2 (ENSPSMG00000005948) FAM200C (ENSPSMG00000005938) SLU7 (ENSPSMG00000005902) ENSPSMG00000005873 ATP10B (ENSPSMG00000005850) GABRB2 (ENSPSMG00000005588) GABRA6 (ENSPSMG00000005527) GABRA1 (ENSPSMG00000005443) GABRG2 (ENSPSMG00000005134) CCNG1 (ENSPSMG00000004885) NUDCD2 (ENSPSMG00000004873) HMMR (ENSPSMG00000004855) MAT2B (ENSPSMG00000004803) ENSPSMG00000004725 #22 ENSPSMG00000004710 TCEAL9 (ENSPSMG00000004701) BEX3 (ENSPSMG00000004694) TCEAL4 (ENSPSMG00000004676) Greater bamboo lemur MODERN SPECIES 1618 SPRY3 (ENSPSMG00000020633) #21 ENSPSMG00000020616 #22 Euarchontoglires_A ANCESTRAL SPECIES 11 ENSGT00940000158744 ENSGT00390000005685 ENSGT00940000160294 ENSGT00940000163020 #16 ENSGT00390000016992 #17 ENSGT00940000154783.f ENSGT00390000012647 ENSGT00390000006885.a #8 ENSGT00390000000360.r.b ##9 ENSGT00950000183068.a.a #12 ENSGT00390000018904 #13 ENSGT00940000158132 #14 ENSGT00940000161397 #15 ENSGT00530000063582.a #18 ENSGT00950000183055.a.b #21 ENSGT00510000047733 #22 Glires ANCESTRAL SPECIES 10 ENSGT00940000158744 ENSGT00390000005685 ENSGT00940000160294 ENSGT00940000163020 #16 ENSGT00390000016992 #17 ENSGT00940000154783.f ENSGT00390000012647.d ENSGT00390000006885.a #8 ENSGT00390000000360.r.b ##9 ENSGT00950000183068.a.a #12 ENSGT00390000018904 #13 ENSGT00940000158132 #14 ENSGT00940000161397 #15 ENSGT00530000063582.a #18 ENSGT00950000183055.a.b #21 ENSGT00510000047733 #22 Lagomorpha ANCESTRAL SPECIES 188 ENSGT00940000159803 ENSGT00510000047092 ENSGT00940000158744 ENSGT00940000160294 ENSGT00940000154783.f ENSGT00390000012647.c.b ENSGT00390000006885.a #8 ENSGT00390000000360.r.b ##9 ENSGT00950000183068.a.a #12 ENSGT00390000018904 #13 ENSGT00940000158132 #14 ENSGT00940000161397 #15 ENSGT00940000163020 #16 ENSGT00530000063582.a #18 ENSGT00950000183055.a.b #21 ENSGT00510000047733 #22 Rabbit DUPLICATION Rabbit MODERN SPECIES 516 MPP1 (ENSOCUG00000012660) ENSOCUG00000036130 F8 (ENSOCUG00000000142) FUNDC2 (ENSOCUG00000024176) ENSOCUG00000027749 MTCP1 (ENSOCUG00000009720) #8 BRCC3 (ENSOCUG00000009730) ##9 ENSOCUG00000023330 #12 ENSOCUG00000017448 #13 RAB39B (ENSOCUG00000004254) #14 ENSOCUG00000037631 CLIC2 (ENSOCUG00000007480) #15 ENSOCUG00000024947 #16 TMLHE (ENSOCUG00000008669) #18 SPRY3 (ENSOCUG00000022218) #21 ENSOCUG00000001270 #22 Rabbit MODERN SPECIES 6 ENSOCUG00000034864 ENSOCUG00000026700 ENSOCUG00000026559 ENSOCUG00000029658 ENSOCUG00000022593 ENSOCUG00000005024 SULT1E1 (ENSOCUG00000029429) ENSOCUG00000009486 CSN2 (ENSOCUG00000009494) ENSOCUG00000028049 ENSOCUG00000003355 ODAM (ENSOCUG00000024016) FDCSP (ENSOCUG00000032150) CSN3 (ENSOCUG00000015167) AMTN (ENSOCUG00000002586) ENSOCUG00000034030 #22 ENSOCUG00000024113 AMBN (ENSOCUG00000022916) ENAM (ENSOCUG00000006609) JCHAIN (ENSOCUG00000027219) UTP3 (ENSOCUG00000010003) RUFY3 (ENSOCUG00000010015) GRSF1 (ENSOCUG00000010029) ENSOCUG00000026385 MOB1B (ENSOCUG00000001806) DCK (ENSOCUG00000001265) ENSOCUG00000034841 SLC4A4 (ENSOCUG00000006500) GC (ENSOCUG00000007986) ENSOCUG00000032384 NPFFR2 (ENSOCUG00000006868) Rodentia ANCESTRAL SPECIES 10 ENSGT00940000158744 ENSGT00390000005685 ENSGT00940000160294 ENSGT00940000163020 #16 ENSGT00390000016992 #17 ENSGT00940000154783.f ENSGT00390000012647.d ENSGT00390000006885.a #8 ENSGT00390000000360.r.b ##9 ENSGT00950000183068.a.a #12 ENSGT00390000018904 #13 ENSGT00940000158132 #14 ENSGT00940000161397 #15 ENSGT00530000063582.a #18 ENSGT00950000183055.a.b #21 ENSGT00510000047733 #22 Rodentia_B ANCESTRAL SPECIES 16 ENSGT00510000047092 ENSGT00940000158744 ENSGT00390000005685 ENSGT00940000160294 ENSGT00940000154783.f ENSGT00390000012647.d ENSGT00390000006885.a #8 ENSGT00390000000360.r.b ##9 ENSGT00390000018904 #13 ENSGT00940000158132 #14 ENSGT00940000161397 #15 ENSGT00940000163020 #16 ENSGT00390000016992 #17 ENSGT00530000063582.a #18 ENSGT00950000183055.a.b #21 ENSGT00510000047733 #22 Kangaroo rat MODERN SPECIES 526 ENSDORG00000000625 Gab3 (ENSDORG00000006809) ENSDORG00000013566 Mpp1 (ENSDORG00000013568) ENSDORG00000024019 F8 (ENSDORG00000013155) ENSDORG00000028874 Fundc2 (ENSDORG00000013156) Mtcp1 (ENSDORG00000013159) #8 ENSDORG00000029487 ENSDORG00000013161 ##9 ENSDORG00000004628 #13 Rab39b (ENSDORG00000029496) #14 F8a (ENSDORG00000028723) #17 ENSDORG00000014658 #18 ENSDORG00000026230 #22 Myomorpha ANCESTRAL SPECIES 6 ENSGT00510000047092 ENSGT00940000158744 ENSGT00390000005685 ENSGT00940000160294 ENSGT00940000154783.f ENSGT00390000012647.d ENSGT00390000006885.a #8 ENSGT00390000000360.r.b ##9 ENSGT00390000018904 #13 ENSGT00940000158132 #14 ENSGT00940000161397 #15 ENSGT00940000163020 #16 ENSGT00390000016992 #17 ENSGT00530000063582.a #18 ENSGT00950000183055.a.b #21 ENSGT00510000047733 #22 Lesser Egyptian jerboa MODERN SPECIES 248 Gab3 (ENSJJAG00000010656) ENSJJAG00000010086 Mpp1 (ENSJJAG00000009953) F8 (ENSJJAG00000003754) Fundc2 (ENSJJAG00000000632) Cmc4 (ENSJJAG00000018410) Mtcp1 (ENSJJAG00000018300) #8 ENSJJAG00000017846 ##9 ENSJJAG00000017143 #13 Rab39b (ENSJJAG00000016977) #14 ENSJJAG00000016928 #15 ENSJJAG00000016876 #18 ENSJJAG00000016767 #21 ENSJJAG00000016374 ENSJJAG00000016041 #22 Muroidea ANCESTRAL SPECIES 13 ENSGT00510000047092 ENSGT00940000158744 ENSGT00390000005685 ENSGT00940000160294 ENSGT00940000154783.f ENSGT00390000012647.d ENSGT00390000006885.a #8 ENSGT00390000000360.r.b ##9 ENSGT00390000018904 #13 ENSGT00940000158132 #14 ENSGT00940000161397 #15 ENSGT00940000163020 #16 ENSGT00390000016992 #17 ENSGT00530000063582.a #18 ENSGT00950000183055.a.b #21 ENSGT00510000047733 #22 Upper Galilee mountains blind mole rat MODERN SPECIES 1181 ENSNGAG00000009939 Gab3 (ENSNGAG00000003725) ENSNGAG00000015724 Mpp1 (ENSNGAG00000017947) F8 (ENSNGAG00000013455) Fundc2 (ENSNGAG00000017968) Cmc4 (ENSNGAG00000019649) Mtcp1 (ENSNGAG00000020777) #8 ENSNGAG00000000120 ##9 Vbp1 (ENSNGAG00000013672) #13 Rab39b (ENSNGAG00000000596) #14 ENSNGAG00000001653 #15 F8a (ENSNGAG00000011651) #17 ENSNGAG00000012650 #18 ENSNGAG00000015269 #21 ENSNGAG00000016000 #22 Muroidea_A ANCESTRAL SPECIES 7 ENSGT01100000263574.b.j ENSGT00940000159803 ENSGT00510000047092 ENSGT00940000158744 ENSGT00390000005685 ENSGT00940000160294 ENSGT00940000154783.f ENSGT00390000012647.d ENSGT00390000006885.a #8 ENSGT00390000000360.r.b.a.a ##9 ENSGT00390000018904 #13 ENSGT00940000158132 #14 ENSGT00940000161397 #15 ENSGT00530000063582.a #18 ENSGT00950000183055.a.b #21 ENSGT00510000047733 #22 Cricetidae ANCESTRAL SPECIES 8 ENSGT01050000244815.B.a.a ENSGT00940000159803 ENSGT00510000047092 ENSGT00940000158744 ENSGT00390000005685 ENSGT00940000160294 ENSGT00940000154783.f.db.b ENSGT00390000012647.d ENSGT00390000006885.a #8 ENSGT00390000000360.r.b.a.a ##9 ENSGT00390000018904 #13 ENSGT00940000158132 #14 ENSGT00940000161397 #15 ENSGT00530000063582.a #18 ENSGT00950000183055.a.b #21 ENSGT00510000047733 #22 Cricetidae_B ANCESTRAL SPECIES 28 ENSGT01050000244815.B.a.a ENSGT00940000159803 ENSGT00510000047092 ENSGT00940000158744 ENSGT00390000005685 ENSGT00940000160294 ENSGT00940000154783.f.db.b ENSGT00390000012647.d ENSGT00390000006885.a #8 ENSGT00390000000360.r.b.a.a ##9 ENSGT00390000018904 #13 ENSGT00940000158132 #14 ENSGT00940000161397 #15 ENSGT00530000063582.a #18 ENSGT00950000183055.a.b #21 ENSGT00510000047733 #22 Northern American deer mouse MODERN SPECIES 475 Gab3 (ENSPEMG00000012634) Dkc1 (ENSPEMG00000013348) ENSPEMG00000022395 Mpp1 (ENSPEMG00000014261) Smim9 (ENSPEMG00000010945) F8 (ENSPEMG00000014119) ENSPEMG00000026725 Cmc4 (ENSPEMG00000024388) Mtcp1 (ENSPEMG00000030977) #8 Brcc3 (ENSPEMG00000014353) ##9 Vbp1 (ENSPEMG00000004677) #13 Rab39b (ENSPEMG00000029552) #14 ENSPEMG00000029793 #15 ENSPEMG00000014227 #18 ENSPEMG00000000399 #21 ENSPEMG00000008468 #22 ENSPEMG00000017331 Ct55 (ENSPEMG00000000280) ENSPEMG00000024706 ENSPEMG00000029185 ENSPEMG00000027347 Prairie vole MODERN SPECIES 168 Gab3 (ENSMOCG00000015626) ENSMOCG00000001169 Mpp1 (ENSMOCG00000000082) Smim9 (ENSMOCG00000003619) ENSMOCG00000001114 F8 (ENSMOCG00000006178) Fundc2 (ENSMOCG00000013641) Mtcp1 (ENSMOCG00000002450) #8 Cmc4 (ENSMOCG00000019858) ENSMOCG00000000841 ##9 Vbp1 (ENSMOCG00000013440) #13 Rab39b (ENSMOCG00000006994) #14 ENSMOCG00000012583 #18 ENSMOCG00000003592 #21 ENSMOCG00000015068 ENSMOCG00000012849 #22 ENSMOCG00000019973 Cricetinae ANCESTRAL SPECIES 46 ENSGT01050000244815.B.a.a ENSGT00410000025802.g.b.q.a ENSGT00940000159803 ENSGT00510000047092 ENSGT00940000158744 ENSGT00390000005685 ENSGT00940000160294 ENSGT00940000154783.f.db.b ENSGT00390000012647.d ENSGT00390000006885.a #8 ENSGT00390000000360.r.b.a.a ##9 ENSGT00390000018904 #13 ENSGT00940000158132 #14 ENSGT00530000063582.a #18 ENSGT00950000183055.a.b #21 ENSGT00510000047733 #22 Chinese hamster chok1gshd MODERN SPECIES 16 ENSCGRG00001018213 ENSCGRG00001000852 Gab3 (ENSCGRG00001024780) ENSCGRG00001014574 Mpp1 (ENSCGRG00001000334) Smim9 (ENSCGRG00001020847) F8 (ENSCGRG00001018172) Fundc2 (ENSCGRG00001005074) Cmc4 (ENSCGRG00001024106) Mtcp1 (ENSCGRG00001021448) #8 Brcc3 (ENSCGRG00001000059) ##9 ENSCGRG00001012855 #13 Rab39b (ENSCGRG00001022502) #14 ENSCGRG00001011867 #18 ENSCGRG00001004214 #21 ENSCGRG00001005752 #22 Golden Hamster MODERN SPECIES 891 ENSMAUG00000006516 Gab3 (ENSMAUG00000000113) Dkc1 (ENSMAUG00000016454) ENSMAUG00000000280 Smim9 (ENSMAUG00000018168) F8 (ENSMAUG00000017844) Fundc2 (ENSMAUG00000013769) Mtcp1 (ENSMAUG00000013746) #8 Cmc4 (ENSMAUG00000012104) Brcc3 (ENSMAUG00000017183) ##9 Vbp1 (ENSMAUG00000012627) #13 Rab39b (ENSMAUG00000011701) #14 ENSMAUG00000011862 #18 ENSMAUG00000010073 #21 ENSMAUG00000000133 #22 Murinae ANCESTRAL SPECIES 81 ENSGT00950000183055.a.b #21 ENSGT00510000047733 #22 Rat MODERN SPECIES 3 AABR07035501.1 (ENSRNOG00000049220) Spn-ps6 (ENSRNOG00000054170) MGC112692 (ENSRNOG00000039282) Spnl1 (ENSRNOG00000028414) ENSRNOG00000063487 Zfp157 (ENSRNOG00000001323) Dhrsx (ENSRNOG00000028323) Asmt (ENSRNOG00000001324) Akap17a (ENSRNOG00000028211) Asmtl (ENSRNOG00000028166) Il3ra (ENSRNOG00000001325) Cyp3a62 (ENSRNOG00000001379) ENSRNOG00000063039 ENSRNOG00000070660 Spry3 (ENSRNOG00000060153) #21 Vamp7 (ENSRNOG00000008372) #22 Cyp3a9 (ENSRNOG00000046643) Rpl31l4 (ENSRNOG00000039249) Gjc3 (ENSRNOG00000001329) Azgp1 (ENSRNOG00000001333) Zkscan1 (ENSRNOG00000001335) LOC103691088 (ENSRNOG00000061371) Zscan21 (ENSRNOG00000039234) Zfp113 (ENSRNOG00000063927) Cops6 (ENSRNOG00000001346) Mcm7 (ENSRNOG00000001349) Ap4m1 (ENSRNOG00000001353) Taf6 (ENSRNOG00000001355) Nxpe5 (ENSRNOG00000068266) LOC680825 (ENSRNOG00000069278) Nxpe5l1 (ENSRNOG00000069743) Mus ANCESTRAL SPECIES 64 ENSGT00950000183055.a.b #21 ENSGT00510000047733 #22 Mus_A ANCESTRAL SPECIES 60 ENSGT00950000183055.a.b #21 ENSGT00510000047733 #22 Mus_B ANCESTRAL SPECIES 78 ENSGT00950000183055.a.b #21 ENSGT00510000047733 #22 Mus_C ANCESTRAL SPECIES 67 ENSGT00950000183055.a.b #21 ENSGT00510000047733 #22 Steppe mouse DUPLICATION Steppe mouse MODERN SPECIES 1828 ENSMSIG00000000978 #21 ENSMSIG00000000993 #22 ENSMSIG00000001025 Steppe mouse MODERN SPECIES 3237 Edn3 (ENSMSIG00000027362) Zfp831 (ENSMSIG00000027355) Prelid3b (ENSMSIG00000027339) Atp5e (ENSMSIG00000027334) Tubb1 (ENSMSIG00000027325) Ctsz (ENSMSIG00000027319) Nelfcd (ENSMSIG00000027285) ENSMSIG00000027279 Gnas (ENSMSIG00000026932) ENSMSIG00000026915 Npepl1 (ENSMSIG00000026902) Stx16 (ENSMSIG00000026872) ENSMSIG00000026862 #22 ENSMSIG00000026853 Vapb (ENSMSIG00000026843) Rab22a (ENSMSIG00000026825) Ankrd60 (ENSMSIG00000026809) 1700021F07Rik (ENSMSIG00000026800) Pmepa1 (ENSMSIG00000026776) Zbp1 (ENSMSIG00000026758) Pck1 (ENSMSIG00000026751) Ctcfl (ENSMSIG00000026727) Rbm38 (ENSMSIG00000026715) Rae1 (ENSMSIG00000026688) Spo11 (ENSMSIG00000026627) Bmp7 (ENSMSIG00000026606) Tfap2c (ENSMSIG00000026572) Fam209 (ENSMSIG00000026567) Rodentia_A ANCESTRAL SPECIES 9 ENSGT00940000158744 ENSGT00390000005685 ENSGT00940000160294 ENSGT00940000163020 #16 ENSGT00390000016992 #17 ENSGT00940000154783.f ENSGT00390000012647.d ENSGT00390000006885.a #8 ENSGT00390000000360.r.b ##9 ENSGT00950000183068.a.a #12 ENSGT00390000018904 #13 ENSGT00940000158132 #14 ENSGT00940000161397 #15 ENSGT00530000063582.a #18 ENSGT00950000183055.a.b #21 ENSGT00510000047733 #22 Hystricomorpha ANCESTRAL SPECIES 54 ENSGT00940000159803 ENSGT00510000047092 ENSGT00940000158744 ENSGT00940000160294 ENSGT00940000154783.f ENSGT00390000012647.d ENSGT00390000006885.a #8 ENSGT00390000000360.r.b ##9 ENSGT00390000000360.r.a.a ##9 ENSGT00950000183068.a.a #12 ENSGT00390000018904 #13 ENSGT00940000158132 #14 ENSGT00940000161397 #15 ENSGT00530000063582.a #18 ENSGT00950000183055.a.b #21 ENSGT00510000047733 #22 Naked mole-rat female MODERN SPECIES 31 F8 (ENSHGLG00000034300) ENSHGLG00000048533 ENSHGLG00000037924 #17 ENSHGLG00000035621 FUNDC2 (ENSHGLG00000001278) MTCP1 (ENSHGLG00000001243) #8 ENSHGLG00000001061 ##9 ENSHGLG00000047377 VBP1 (ENSHGLG00000044108) #13 RAB39B (ENSHGLG00000036840) #14 ENSHGLG00000043926 #15 TMLHE (ENSHGLG00000000101) #18 ENSHGLG00000040623 #21 ENSHGLG00000033454 ENSHGLG00000040335 ENSHGLG00000046871 #22 ENSHGLG00000045337 CNGA2 (ENSHGLG00000002074) PRRG3 (ENSHGLG00000042836) ENSHGLG00000043691 ENSHGLG00000040679 ENSHGLG00000019897 VMA21 (ENSHGLG00000037060) ENSHGLG00000047782 GPR50 (ENSHGLG00000000278) ENSHGLG00000000206 ENSHGLG00000032973 CD99L2 (ENSHGLG00000000568) MTMR1 (ENSHGLG00000000382) ENSHGLG00000044631 MTM1 (ENSHGLG00000000507) Hystricomorpha_a ANCESTRAL SPECIES 61 ENSGT00940000159803 ENSGT00510000047092 ENSGT00940000158744 ENSGT00940000160294 ENSGT00940000154783.f ENSGT00390000012647.d ENSGT00390000006885.a #8 ENSGT00390000000360.r.b ##9 ENSGT00390000000360.r.a.a ##9 ENSGT00950000183068.a.a #12 ENSGT00390000018904 #13 ENSGT00940000158132 #14 ENSGT00940000161397 #15 ENSGT00530000063582.a #18 ENSGT00950000183055.a.b #21 ENSGT00510000047733 #22 Hystricomorpha_b ANCESTRAL SPECIES 120 ENSGT00940000159803 ENSGT00510000047092 ENSGT00940000158744 ENSGT00940000160294 ENSGT00940000154783.f ENSGT00390000012647.d ENSGT00390000006885.a #8 ENSGT00390000000360.r.b ##9 ENSGT00390000000360.r.a.a ##9 ENSGT00950000183068.a.a #12 ENSGT00390000018904 #13 ENSGT00940000158132 #14 ENSGT00940000161397 #15 ENSGT00530000063582.a #18 ENSGT00950000183055.a.b #21 ENSGT00510000047733 #22 Long-tailed chinchilla MODERN SPECIES 301 GAB3 (ENSCLAG00000000759) DKC1 (ENSCLAG00000000720) MPP1 (ENSCLAG00000000595) F8 (ENSCLAG00000000314) FUNDC2 (ENSCLAG00000000230) CMC4 (ENSCLAG00000000217) MTCP1 (ENSCLAG00000000239) #8 BRCC3 (ENSCLAG00000000163) ##9 ENSCLAG00000000125 #12 VBP1 (ENSCLAG00000000117) #13 RAB39B (ENSCLAG00000000113) #14 CLIC2 (ENSCLAG00000000498) #15 TMLHE (ENSCLAG00000000490) #18 SPRY3 (ENSCLAG00000000405) #21 VAMP7 (ENSCLAG00000000352) #22 Guinea pig MODERN SPECIES 148 IKBKG (ENSCPOG00000021550) ENSCPOG00000026136 GAB3 (ENSCPOG00000002987) DKC1 (ENSCPOG00000008825) MPP1 (ENSCPOG00000008826) F8 (ENSCPOG00000007773) FUNDC2 (ENSCPOG00000015635) MTCP1 (ENSCPOG00000034922) #8 CMC4 (ENSCPOG00000033896) ENSCPOG00000001882 ##9 VBP1 (ENSCPOG00000013652) #13 RAB39B (ENSCPOG00000039524) #14 CLIC2 (ENSCPOG00000007641) #15 TMLHE (ENSCPOG00000005415) #18 SPRY3 (ENSCPOG00000038854) #21 VAMP7 (ENSCPOG00000024405) #22 Sciuridae ANCESTRAL SPECIES 62 ENSGT00940000158744 ENSGT00390000005685 ENSGT00940000160294 ENSGT00940000163020 #16 ENSGT00390000016992 #17 ENSGT00940000154783.f ENSGT00390000012647.d ENSGT00390000006885.a #8 ENSGT00390000000360.r.b ##9 ENSGT00950000183068.a.a #12 ENSGT00390000018904 #13 ENSGT00940000158132 #14 ENSGT00940000161397 #15 ENSGT00530000063582.a #18 ENSGT00950000183055.a.b #21 ENSGT00510000047733 #22 Eurasian red squirrel MODERN SPECIES 156 ENSSVLG00005016435 #16 ENSSVLG00005016424 #17 F8 (ENSSVLG00005016200) ENSSVLG00005016124 MTCP1 (ENSSVLG00005016077) #8 ENSSVLG00005015678 ##9 ENSSVLG00005015476 #13 RAB39B (ENSSVLG00005015437) #14 CLIC2 (ENSSVLG00005015403) #15 ENSSVLG00005015390 #16 ENSSVLG00005015367 #17 ENSSVLG00005015345 #16 TMLHE (ENSSVLG00005015282) #18 ENSSVLG00005015225 SPRY3 (ENSSVLG00005015208) #21 VAMP7 (ENSSVLG00005015109) #22 Marmotini ANCESTRAL SPECIES 23 ENSGT00530000063582.a #18 ENSGT00950000183055.a.b #21 ENSGT00510000047733 #22 ENSGT00520000057704 ENSGT00940000155742 ENSGT00950000183158.E ENSGT00940000159700 ENSGT00390000006753.B ENSGT00940000161018 ENSGT00530000063851.b ENSGT01050000244857.C.a.b ENSGT00940000162678 ENSGT00950000183007.a.b.g.a.b.a.c.a ENSGT00390000009443 ENSGT00390000006954 ENSGT00390000002792.bb.a ENSGT00950000183027.a.a ENSGT00950000183054.a.a.b Marmotini_b DUPLICATION Marmotini_b ANCESTRAL SPECIES 16 ENSGT00390000011084 ENSGT00390000006935 ENSGT00940000157199 ENSGT00940000159206 ENSGT00390000014940 ENSGT00940000157703 ENSGT00390000003837 ENSGT00940000154412.A ENSGT00520000057704 ENSGT00530000063582.a #18 ENSGT00950000183055.a.b #21 ENSGT00510000047733.i #22 ENSGT00940000155742 ENSGT00950000183158.E ENSGT00940000159700 ENSGT00390000006753.B ENSGT00940000161018 ENSGT00530000063851.b ENSGT01050000244857.C.a.b ENSGT00940000162678 ENSGT00950000183007.a.b.g.a.b.a.c.a ENSGT00950000183007.a.b.g.a.b.a.c.b ENSGT00390000009443 ENSGT00390000006954 ENSGT00390000002792.bb.a ENSGT00950000183027.a.a ENSGT00950000183054.a.a.b Arctic ground squirrel MODERN SPECIES 646 CLIC2 (ENSUPAG00010008229) #15 RAB39B (ENSUPAG00010008223) #14 VBP1 (ENSUPAG00010008210) #13 ENSUPAG00010008195 #12 BRCC3 (ENSUPAG00010008154) ##9 MTCP1 (ENSUPAG00010008144) #8 CMC4 (ENSUPAG00010008129) ENSUPAG00010008121 ENSUPAG00010007355 ENSUPAG00010007335 #17 TMLHE (ENSUPAG00010007316) #18 SPRY3 (ENSUPAG00010007313) #21 VAMP7 (ENSUPAG00010007306) #22 Squirrel MODERN SPECIES 104 PHAX (ENSSTOG00000002037) TEX43 (ENSSTOG00000030805) LMNB1 (ENSSTOG00000003539) MARCHF3 (ENSSTOG00000003582) C5orf63 (ENSSTOG00000023735) MEGF10 (ENSSTOG00000010069) PRRC1 (ENSSTOG00000003266) CTXN3 (ENSSTOG00000001125) CCDC192 (ENSSTOG00000031225) ENSSTOG00000032140 #22 SLC12A2 (ENSSTOG00000003238) FBN2 (ENSSTOG00000000208) SLC27A6 (ENSSTOG00000007927) ISOC1 (ENSSTOG00000023369) ADAMTS19 (ENSSTOG00000027482) MINAR2 (ENSSTOG00000011777) CHSY3 (ENSSTOG00000021825) ZNF300 (ENSSTOG00000030911) ENSSTOG00000030572 ENSSTOG00000025044 ENSSTOG00000024119 ENSSTOG00000030802 DCTN4 (ENSSTOG00000013446) ENSSTOG00000027197 MYOZ3 (ENSSTOG00000013433) Marmotini_b ANCESTRAL SPECIES ENSGT00510000047733.j #22 Squirrel MODERN SPECIES 540 SPRY3 (ENSSTOG00000025454) #21 ENSSTOG00000031326 ENSSTOG00000025036 #22 Alpin marmot DUPLICATION Alpin marmot MODERN SPECIES 170 ENSMMMG00000003890 TMLHE (ENSMMMG00000003868) #18 SPRY3 (ENSMMMG00000003859) #21 VAMP7 (ENSMMMG00000003845) #22 Alpin marmot MODERN SPECIES ENSMMMG00000020156 ENSMMMG00000020141 ZNF608 (ENSMMMG00000020134) GRAMD2B (ENSMMMG00000020111) ALDH7A1 (ENSMMMG00000020066) PHAX (ENSMMMG00000020058) TEX43 (ENSMMMG00000020056) ENSMMMG00000020047 LMNB1 (ENSMMMG00000020037) MARCHF3 (ENSMMMG00000020035) C5orf63 (ENSMMMG00000020014) ENSMMMG00000020005 MEGF10 (ENSMMMG00000019988) PRRC1 (ENSMMMG00000019979) CTXN3 (ENSMMMG00000019975) ENSMMMG00000019969 #22 CCDC192 (ENSMMMG00000019959) SLC12A2 (ENSMMMG00000019843) FBN2 (ENSMMMG00000019800) SLC27A6 (ENSMMMG00000019780) ISOC1 (ENSMMMG00000019777) ADAMTS19 (ENSMMMG00000019725) MINAR2 (ENSMMMG00000019719) ZNF300 (ENSMMMG00000019706) ENSMMMG00000019702 ENSMMMG00000019661 SMIM3 (ENSMMMG00000019655) DCTN4 (ENSMMMG00000019623) RBM22 (ENSMMMG00000019619) MYOZ3 (ENSMMMG00000019613) SYNPO (ENSMMMG00000019608) Laurasiatheria ANCESTRAL SPECIES 26 ENSGT00390000005685 ENSGT00940000160294 ENSGT00940000163020 #16 ENSGT00390000016992 #17 ENSGT00940000154783.f ENSGT00390000012647 ENSGT00390000006885.a #8 ENSGT00390000000360.r ##9 ENSGT00950000183068.a.a #12 ENSGT00390000018904 #13 ENSGT00910000148519 ENSGT00940000158132 #14 ENSGT00940000161397 #15 ENSGT00530000063582.a #18 ENSGT00950000183055.a.b #21 ENSGT00510000047733 #22 Eulipotyphla ANCESTRAL SPECIES ENSGT00510000047733 #22 Common shrew MODERN SPECIES 1748 VAMP7 (ENSSARG00000004615) #22 Hedgehog MODERN SPECIES 2387 VAMP7 (ENSEEUG00000006561) #22 Laurasiatheria_a ANCESTRAL SPECIES 10 ENSGT00940000163020 #16 ENSGT00390000016992 #17 ENSGT00940000154783.f ENSGT00390000012647 ENSGT00390000006885.a #8 ENSGT00390000000360.r.d ##9 ENSGT00950000183068.a.a #12 ENSGT00390000018904 #13 ENSGT00910000148519 ENSGT00940000158132 #14 ENSGT00940000161397 #15 ENSGT00530000063582.a #18 ENSGT00950000185382 ENSGT00950000183055.a.b #21 ENSGT01030000235464 ENSGT00510000047733 #22 Laurasiatheria_b ANCESTRAL SPECIES 10 ENSGT00940000163020 #16 ENSGT00390000016992 #17 ENSGT00940000154783.f ENSGT00390000012647 ENSGT00390000006885.a #8 ENSGT00390000000360.r.d ##9 ENSGT00950000183068.a.a #12 ENSGT00390000018904 #13 ENSGT00910000148519 ENSGT00940000158132 #14 ENSGT00940000161397 #15 ENSGT00530000063582.a #18 ENSGT00950000185382 ENSGT00950000183055.a.b #21 ENSGT01030000235464 ENSGT00510000047733 #22 Carnivora ANCESTRAL SPECIES 11 ENSGT00940000160294 ENSGT00940000163020 #16 ENSGT00390000016992 #17 ENSGT00940000154783.f ENSGT00390000012647 ENSGT00390000006885.a #8 ENSGT00390000000360.r.d ##9 ENSGT00950000183068.a.a #12 ENSGT00390000018904 #13 ENSGT00910000148519 ENSGT00940000158132 #14 ENSGT00940000161397 #15 ENSGT00530000063582.a #18 ENSGT00950000185382 ENSGT00950000183055.a.b #21 ENSGT00510000047733 #22 Felidae ANCESTRAL SPECIES 29 ENSGT00390000005685 ENSGT00940000160294 ENSGT00940000163020 #16 ENSGT00390000016992 #17 ENSGT00940000154783.f ENSGT00390000012647 ENSGT00390000006885.a #8 ENSGT00390000000360.r.d ##9 ENSGT00950000183068.a.a #12 ENSGT00390000018904 #13 ENSGT00940000158132 #14 ENSGT00940000161397 #15 ENSGT00530000063582.a #18 ENSGT01010000226875 ENSGT00950000183055.a.b #21 ENSGT00510000047733 #22 Panthera ANCESTRAL SPECIES 53 ENSGT00940000160294.k ENSGT00940000163020 #16 ENSGT00390000016992 #17 ENSGT00940000160294.l.a ENSGT00940000154783.f ENSGT00390000012647 ENSGT00390000006885.a #8 ENSGT00390000000360.r.d ##9 ENSGT00950000183068.a.a #12 ENSGT00390000018904 #13 ENSGT00940000158132 #14 ENSGT00940000161397 #15 ENSGT00530000063582.a #18 ENSGT01010000226875 ENSGT00950000183055.a.b #21 ENSGT00510000047733 #22 Panthera_a ANCESTRAL SPECIES 96 ENSGT00530000063582.a #18 ENSGT01010000226875 ENSGT00950000183055.a.b #21 ENSGT00510000047733 #22 leopard MODERN SPECIES 259 SPRY3 (ENSPPRG00000012079) #21 VAMP7 (ENSPPRG00000004989) #22 ENSPPRG00000004932 ENSPPRG00000004918 lion MODERN SPECIES 88 ENSPLOG00000009920 FUNDC2 (ENSPLOG00000009895) CMC4 (ENSPLOG00000009878) MTCP1 (ENSPLOG00000009860) #8 BRCC3 (ENSPLOG00000009840) ##9 ENSPLOG00000009805 #12 VBP1 (ENSPLOG00000009773) #13 RAB39B (ENSPLOG00000009756) #14 ENSPLOG00000009737 ENSPLOG00000009727 #16 ENSPLOG00000009715 #17 ENSPLOG00000009699 #16 TMLHE (ENSPLOG00000009686) #18 ENSPLOG00000009660 SPRY3 (ENSPLOG00000009644) #21 VAMP7 (ENSPLOG00000009591) #22 GTPBP6 (ENSPLOG00000009500) Tiger MODERN SPECIES 352 SPRY3 (ENSPTIG00000010662) #21 VAMP7 (ENSPTIG00000019664) #22 Cat MODERN SPECIES 252 ENSFCAG00000045185 #17 FUNDC2 (ENSFCAG00000031335) CMC4 (ENSFCAG00000023645) MTCP1 (ENSFCAG00000029629) #8 BRCC3 (ENSFCAG00000019258) ##9 ENSFCAG00000027511 #12 VBP1 (ENSFCAG00000022037) #13 RAB39B (ENSFCAG00000038920) #14 CLIC2 (ENSFCAG00000038526) #15 H2AB2 (ENSFCAG00000044576) #16 ENSFCAG00000045412 #17 H2AB3 (ENSFCAG00000044965) #16 TMLHE (ENSFCAG00000023758) #18 ENSFCAG00000047531 SPRY3 (ENSFCAG00000028342) #21 VAMP7 (ENSFCAG00000025706) #22 ENSFCAG00000048570 ENSFCAG00000010308 Caniformia ANCESTRAL SPECIES 22 ENSGT00940000163020 #16 ENSGT00390000016992 #17 ENSGT00940000160294 ENSGT00940000154783.f ENSGT00390000012647 ENSGT00390000006885.a #8 ENSGT00390000000360.r.d ##9 ENSGT00950000183068.a.a #12 ENSGT00390000018904 #13 ENSGT00910000148519 ENSGT00940000158132 #14 ENSGT00940000161397 #15 ENSGT00530000063582.a #18 ENSGT00950000185382 ENSGT00950000183055.a.b #21 ENSGT00510000047733 #22 Caniformia_b ANCESTRAL SPECIES 27 ENSGT00390000005685 ENSGT00940000160294 ENSGT00940000154783.f ENSGT00390000006885.a #8 ENSGT00390000000360.r.c.b ##9 ENSGT00390000012647 ENSGT00390000000360.r.d ##9 ENSGT00950000183068.a.a #12 ENSGT00390000018904 #13 ENSGT00910000148519 ENSGT00940000158132 #14 ENSGT00940000161397 #15 ENSGT00940000163020 #16 ENSGT00530000063582.a #18 ENSGT00950000183055.a.b #21 ENSGT00510000047733 #22 Mustelinae ANCESTRAL SPECIES 272 ENSGT00950000183055.a.b #21 ENSGT00510000047733 #22 American mink MODERN SPECIES 499 GALNT7 (ENSNVIG00000017803) HMGB2 (ENSNVIG00000017827) SAP30 (ENSNVIG00000017852) SCRG1 (ENSNVIG00000017873) SPRY3 (ENSNVIG00000017883) #21 VAMP7 (ENSNVIG00000017903) #22 Ferret DUPLICATION Ferret MODERN SPECIES 463 ENSMPUG00000019547 ENSMPUG00000019545 ENSMPUG00000016145 ENSMPUG00000019543 GAB3 (ENSMPUG00000016143) MPP1 (ENSMPUG00000016141) F8 (ENSMPUG00000016139) DKC1 (ENSMPUG00000016136) BRCC3 (ENSMPUG00000016134) ##9 ENSMPUG00000016133 #12 ENSMPUG00000016131 #13 RAB39B (ENSMPUG00000016129) #14 CLIC2 (ENSMPUG00000016128) #15 ENSMPUG00000019541 #16 TMLHE (ENSMPUG00000016127) #18 ENSMPUG00000016113 #22 Ferret MODERN SPECIES 465 ENSMPUG00000015066 ENSMPUG00000015069 #22 ENSMPUG00000015070 BAMBI (ENSMPUG00000015071) WAC (ENSMPUG00000015072) ENSMPUG00000015074 MPP7 (ENSMPUG00000015076) ENSMPUG00000015078 Ursidae ANCESTRAL SPECIES ENSGT00510000047733 #22 Ursus ANCESTRAL SPECIES ENSGT00510000047733 #22 American black bear MODERN SPECIES 3234 VAMP7 (ENSUAMG00000027670) #22 Polar bear MODERN SPECIES 140 VAMP7 (ENSUMAG00000017420) #22 Giant Panda MODERN SPECIES 2288 F8 (ENSAMEG00000002491) ENSAMEG00000028778 FUNDC2 (ENSAMEG00000011956) ENSAMEG00000024837 CMC4 (ENSAMEG00000011961) MTCP1 (ENSAMEG00000028878) #8 BRCC3 (ENSAMEG00000011969) ##9 ENSAMEG00000011976 #12 VBP1 (ENSAMEG00000030279) #13 ENSAMEG00000028809 RAB39B (ENSAMEG00000009075) #14 CLIC2 (ENSAMEG00000009077) #15 ENSAMEG00000026904 #16 ENSAMEG00000025129 #16 TMLHE (ENSAMEG00000013789) #18 ENSAMEG00000006387 #22 Canidae ANCESTRAL SPECIES 50 ENSGT00940000158744 ENSGT00940000163020 #16 ENSGT00390000016992 #17 ENSGT00940000160294 ENSGT00940000154783.f ENSGT00390000012647.a ENSGT00390000006885.a #8 ENSGT00390000000360.r.d ##9 ENSGT00950000183068.a.a #12 ENSGT00390000018904 #13 ENSGT00940000158132 #14 ENSGT00940000161397 #15 ENSGT00530000063582.a #18 ENSGT00950000185382 ENSGT00950000183055.a.b #21 ENSGT00510000047733 #22 Red fox MODERN SPECIES 304 TMLHE (ENSVVUG00000002892) #18 SPRY3 (ENSVVUG00000002880) #21 VAMP7 (ENSVVUG00000002875) #22 Canis_lupus ANCESTRAL SPECIES 22 ENSGT00510000047092.a ENSGT00940000158744 ENSGT00940000163020 #16 ENSGT00390000016992.m #17 ENSGT00940000160294 ENSGT00940000154783.f ENSGT00390000006885.a #8 ENSGT00390000012647.a ENSGT00390000000360.r.c.a ##9 ENSGT00390000018904 #13 ENSGT00940000158132 #14 ENSGT00940000161397 #15 ENSGT00530000063582.a #18 ENSGT00950000185382 ENSGT00950000183055.a.b #21 ENSGT00510000047733 #22 Dingo MODERN SPECIES 383 ENSCAFG00020008736 #17 F8 (ENSCAFG00020008704) FUNDC2 (ENSCAFG00020008699) MTCP1 (ENSCAFG00020008697) #8 CMC4 (ENSCAFG00020008696) ENSCAFG00020008684 ##9 VBP1 (ENSCAFG00020008675) #13 RAB39B (ENSCAFG00020008673) #14 CLIC2 (ENSCAFG00020008670) #15 ENSCAFG00020008667 #16 ENSCAFG00020008665 #17 ENSCAFG00020008663 #16 TMLHE (ENSCAFG00020008661) #18 ENSCAFG00020008659 SPRY3 (ENSCAFG00020008657) #21 VAMP7 (ENSCAFG00020008654) #22 Dog MODERN SPECIES 144 LAGE3 (ENSCAFG00845029708) ENSCAFG00845029817 DKC1 (ENSCAFG00845029852) MPP1 (ENSCAFG00845029936) F8 (ENSCAFG00845030098) ENSCAFG00845030269 #16 ENSCAFG00845030278 #17 FUNDC2 (ENSCAFG00845030300) ##9 CMC4 (ENSCAFG00845030338) MTCP1 (ENSCAFG00845030350) #8 VBP1 (ENSCAFG00845017867) #13 RAB39B (ENSCAFG00845017965) #14 CLIC2 (ENSCAFG00845017998) #15 ENSCAFG00845018126 #18 SPRY3 (ENSCAFG00845018191) #21 VAMP7 (ENSCAFG00845018278) #22 ENSCAFG00845018459 Laurasiatheria_c ANCESTRAL SPECIES 10 ENSGT00940000160294 ENSGT00940000163020 #16 ENSGT00390000016992 #17 ENSGT00940000154783.f ENSGT00390000012647 ENSGT00390000006885.a #8 ENSGT00390000000360.r.d ##9 ENSGT00950000183068.a.a #12 ENSGT00390000018904 #13 ENSGT00940000158132 #14 ENSGT00940000161397 #15 ENSGT00530000063582.a #18 ENSGT00950000185382 ENSGT00950000183055.a.b #21 ENSGT01030000235464 ENSGT00510000047733 #22 Equus ANCESTRAL SPECIES 52 ENSGT00510000047092 ENSGT00940000158744 ENSGT00390000005685 ENSGT00940000160294 ENSGT00940000154783.f ENSGT00390000012647 ENSGT00390000006885.a #8 ENSGT00390000000360.r.d ##9 ENSGT00390000018904 #13 ENSGT00940000158132 #14 ENSGT00940000161397 #15 ENSGT00530000063582.a #18 ENSGT00950000185382 ENSGT00950000183055.a.b #21 ENSGT01030000235464 ENSGT00510000047733 #22 Horse MODERN SPECIES 480 ENSECAG00000054244 #16 ENSECAG00000029708 #17 ENSECAG00000058802 FUNDC2 (ENSECAG00000026822) MTCP1 (ENSECAG00000043072) #8 BRCC3 (ENSECAG00000021441) ##9 VBP1 (ENSECAG00000001468) #13 ENSECAG00000047761 ENSECAG00000053801 RAB39B (ENSECAG00000007380) #14 CLIC2 (ENSECAG00000008024) #15 TMLHE (ENSECAG00000012334) #18 SPRY3 (ENSECAG00000058224) #21 ENSECAG00000027923 ENSECAG00000030972 VAMP7 (ENSECAG00000014117) #22 Donkey MODERN SPECIES 36 MPP1 (ENSEASG00005007482) SMIM9 (ENSEASG00005025831) ENSEASG00005033689 ENSEASG00005004499 ENSEASG00005034088 ENSEASG00005036735 MTCP1 (ENSEASG00005004486) #8 BRCC3 (ENSEASG00005004482) ##9 VBP1 (ENSEASG00005035328) #13 RAB39B (ENSEASG00005034031) #14 ENSEASG00005024036 ENSEASG00005001752 #16 ENSEASG00005001750 #18 ENSEASG00005038101 #21 ENSEASG00005011059 ENSEASG00005011061 #22 ENSEASG00005036960 ENSEASG00005035090 TCEAL1 (ENSEASG00005025524) MORF4L2 (ENSEASG00005002526) ENSEASG00005002530 TMEM31 (ENSEASG00005002551) PLP1 (ENSEASG00005002561) ENSEASG00005029160 ENSEASG00005038628 MCTS1 (ENSEASG00005023018) CUL4B (ENSEASG00005000286) LAMP2 (ENSEASG00005002906) ENSEASG00005035999 ATP1B4 (ENSEASG00005007677) TMEM255A (ENSEASG00005007676) Chiroptera ANCESTRAL SPECIES 48 ENSGT00390000005685 ENSGT00940000160294 ENSGT00940000163020 #16 ENSGT00390000016992 #17 ENSGT00940000154783.f ENSGT00390000012647 ENSGT00390000006885.a #8 ENSGT00390000000360.r.c.a ##9 ENSGT00390000000360.r.d ##9 ENSGT00950000183068.a.a #12 ENSGT00390000018904 #13 ENSGT00940000158132 #14 ENSGT00940000161397 #15 ENSGT00530000063582.a #18 ENSGT00950000183055.a.b #21 ENSGT00510000047733 #22 Megabat MODERN SPECIES 4379 VAMP7 (ENSPVAG00000000829) #22 Microchiroptera ANCESTRAL SPECIES 45 ENSGT00510000047092 ENSGT00940000158744 ENSGT00940000160294 ENSGT00390000016992 #17 ENSGT00940000154783.f ENSGT00390000012647 ENSGT00390000006885.a #8 ENSGT00390000000360.r.d ##9 ENSGT00950000183068.a.a #12 ENSGT00390000018904 #13 ENSGT00940000158132 #14 ENSGT00940000161397 #15 ENSGT00940000163020 #16 ENSGT00530000063582.a #18 ENSGT00950000183055.a.b #21 ENSGT00510000047733 #22 ENSGT00940000162988 ENSGT00940000163246 ENSGT00940000162502 ENSGT00950000182925.D.a.b.a.a.a.a ENSGT00950000182925.D.a.b.b Microbat MODERN SPECIES 1106 GAB3 (ENSMLUG00000007763) DKC1 (ENSMLUG00000011918) MPP1 (ENSMLUG00000011938) F8 (ENSMLUG00000002117) ENSMLUG00000007776 CMC4 (ENSMLUG00000024035) MTCP1 (ENSMLUG00000003916) #8 BRCC3 (ENSMLUG00000005420) ##9 VBP1 (ENSMLUG00000015396) #13 RAB39B (ENSMLUG00000007660) #14 CLIC2 (ENSMLUG00000002374) #15 ENSMLUG00000029102 #16 ENSMLUG00000025178 #17 ENSMLUG00000022365 #16 SPRY3 (ENSMLUG00000022306) #21 VAMP7 (ENSMLUG00000012765) #22 ENSMLUG00000011370 ENSMLUG00000025240 FAAH2 (ENSMLUG00000017725) ENSMLUG00000002732 ENSMLUG00000006656 SPIN3 (ENSMLUG00000015431) ENSMLUG00000004357 UBQLN2 (ENSMLUG00000007552) KLF8 (ENSMLUG00000016695) RRAGB (ENSMLUG00000015720) USP51 (ENSMLUG00000015717) ENSMLUG00000006806 ALAS2 (ENSMLUG00000016305) ENSMLUG00000016298 PFKFB1 (ENSMLUG00000016291) Greater horseshoe bat MODERN SPECIES ENSRFEG00010002379 #16 ENSRFEG00010002358 #17 F8 (ENSRFEG00010002258) FUNDC2 (ENSRFEG00010002186) MTCP1 (ENSRFEG00010000401) #8 BRCC3 (ENSRFEG00010000187) ##9 ENSRFEG00010000146 #12 VBP1 (ENSRFEG00010000140) #13 RAB39B (ENSRFEG00010000135) #14 CLIC2 (ENSRFEG00010000129) #15 ENSRFEG00010000120 #17 ENSRFEG00010000099 #16 ENSRFEG00010000092 #16 TMLHE (ENSRFEG00010000091) #18 SPRY3 (ENSRFEG00010000089) #21 VAMP7 (ENSRFEG00010000088) #22 ENSRFEG00010000087 ENSRFEG00010000086 ENSRFEG00010000085 ENSRFEG00010000084 FAAH2 (ENSRFEG00010000083) ENSRFEG00010000082 ENSRFEG00010000081 AR (ENSRFEG00010000079) OPHN1 (ENSRFEG00010000078) YIPF6 (ENSRFEG00010000077) STARD8 (ENSRFEG00010000076) EFNB1 (ENSRFEG00010000075) PJA1 (ENSRFEG00010000073) NALF2 (ENSRFEG00010000072) EDA (ENSRFEG00010000071) Artiodactyla ANCESTRAL SPECIES 9 ENSGT00940000160294 ENSGT00940000163020 #16 ENSGT00390000016992 #17 ENSGT00940000154783.f ENSGT00390000012647 ENSGT00390000006885.a #8 ENSGT00390000000360.r.d ##9 ENSGT00950000183068.a.a #12 ENSGT00390000018904 #13 ENSGT00940000158132 #14 ENSGT00940000161397 #15 ENSGT00530000063582.a #18 ENSGT00950000185382 ENSGT00950000183055.a.b #21 ENSGT01030000235464 ENSGT00510000047733 #22 Suina ANCESTRAL SPECIES 7 ENSGT00390000012647 ENSGT00390000006885.a #8 ENSGT00390000000360.q.a ##9 ENSGT00950000183068.a.a #12 ENSGT00390000018904 #13 ENSGT00940000158132 #14 ENSGT00390000016992 #17 ENSGT00940000163020 #16 ENSGT00940000160294 ENSGT00390000005685 ENSGT00940000161397 #15 ENSGT00530000063582.a #18 ENSGT00950000185382 ENSGT00950000183055.a.b #21 ENSGT01030000235464 ENSGT00510000047733 #22 Chacoan peccary MODERN SPECIES 44 ENSCWAG00000000488 #16 ENSCWAG00000000499 #17 FUNDC2 (ENSCWAG00000000516) CMC4 (ENSCWAG00000000535) MTCP1 (ENSCWAG00000000545) #8 BRCC3 (ENSCWAG00000000584) ##9 ENSCWAG00000000727 #13 RAB39B (ENSCWAG00000000758) #14 CLIC2 (ENSCWAG00000000773) #15 ENSCWAG00000000788 #16 ENSCWAG00000000796 TMLHE (ENSCWAG00000000814) #18 ENSCWAG00000000835 SPRY3 (ENSCWAG00000000847) #21 ENSCWAG00000000859 VAMP7 (ENSCWAG00000000883) #22 ENSCWAG00000000908 ENSCWAG00000000922 ENSCWAG00000000971 Pig MODERN SPECIES 300 ENSSSCG00000054901 #17 FUNDC2 (ENSSSCG00000012817) CMC4 (ENSSSCG00000062015) MTCP1 (ENSSSCG00000012816) #8 BRCC3 (ENSSSCG00000012813) ##9 ENSSSCG00000012812 #12 VBP1 (ENSSSCG00000012811) #13 RAB39B (ENSSSCG00000024233) #14 ENSSSCG00000057979 #17 ENSSSCG00000055307 #16 CLIC2 (ENSSSCG00000039998) #15 ENSSSCG00000063292 #16 TMLHE (ENSSSCG00000038442) #18 ENSSSCG00000035312 SPRY3 (ENSSSCG00000034345) #21 VAMP7 (ENSSSCG00000029615) #22 Artiodactyla_a ANCESTRAL SPECIES 9 ENSGT00390000005685 ENSGT00940000160294 ENSGT00940000163020 #16 ENSGT00390000016992 #17 ENSGT00940000154783.f ENSGT00390000012647 ENSGT00390000006885.a #8 ENSGT00390000000360.r.d ##9 ENSGT00950000183068.a.a #12 ENSGT00390000018904 #13 ENSGT00940000158132 #14 ENSGT00940000161397 #15 ENSGT00530000063582.a #18 ENSGT00950000185382 ENSGT00950000183055.a.b #21 ENSGT00510000047733 #22 Camelidae ANCESTRAL SPECIES 107 ENSGT00940000159803 ENSGT00510000047092 ENSGT00940000158744 ENSGT00390000005685 ENSGT00940000160294 ENSGT00940000154783.f ENSGT00390000012647 ENSGT00390000006885.a #8 ENSGT00390000000360.r.d ##9 ENSGT00390000018904 #13 ENSGT00940000158132 #14 ENSGT00940000163020 #16 ENSGT00940000161397 #15 ENSGT00530000063582.a #18 ENSGT00950000183055.a.b #21 ENSGT00510000047733 #22 Arabian camel MODERN SPECIES 204 ENSCDRG00005017097 DKC1 (ENSCDRG00005017117) MPP1 (ENSCDRG00005017184) SMIM9 (ENSCDRG00005017392) F8 (ENSCDRG00005017422) ENSCDRG00005017538 CMC4 (ENSCDRG00005017574) MTCP1 (ENSCDRG00005017604) #8 BRCC3 (ENSCDRG00005017635) ##9 VBP1 (ENSCDRG00005017794) #13 RAB39B (ENSCDRG00005017901) #14 ENSCDRG00005018049 #16 CLIC2 (ENSCDRG00005018062) #15 TMLHE (ENSCDRG00005018097) #18 SPRY3 (ENSCDRG00005018145) #21 VAMP7 (ENSCDRG00005018159) #22 ENSCDRG00005018222 Alpaca MODERN SPECIES 2991 ENSVPAG00000000273 VAMP7 (ENSVPAG00000000274) #22 Artiodactyla_b ANCESTRAL SPECIES 19 ENSGT00390000005685 ENSGT00940000160294 ENSGT00940000163020 #16 ENSGT00390000016992 #17 ENSGT00940000154783.f ENSGT00390000012647 ENSGT00390000006885.a #8 ENSGT00390000000360.r.d ##9 ENSGT00950000183068.a.a #12 ENSGT00390000018904 #13 ENSGT00940000158132 #14 ENSGT00940000161397 #15 ENSGT00530000063582.a #18 ENSGT00950000185382 ENSGT00950000183055.a.b #21 ENSGT00510000047733 #22 Pecora ANCESTRAL SPECIES 28 ENSGT00390000005685 ENSGT00940000160294 ENSGT00390000016992 #17 ENSGT00940000154783.f ENSGT00390000012647 ENSGT00390000006885.a #8 ENSGT00390000000360.r.d.b ##9 ENSGT00950000183068.a.a #12 ENSGT00390000018904 #13 ENSGT00940000158132 #14 ENSGT00940000161397 #15 ENSGT00940000163020.bb #16 ENSGT00530000063582.a #18 ENSGT00950000185382 ENSGT00950000183055.a.b #21 ENSGT00510000047733 #22 ENSGT00530000063872.A ENSGT00940000158229 ENSGT00940000155935 ENSGT00940000162167 ENSGT00940000159444 ENSGT00940000154972 ENSGT00940000161201 ENSGT00940000155374 ENSGT00390000006832 ENSGT00940000160946 ENSGT00530000064765 ENSGT00390000017980 ENSGT00940000160515 ENSGT00940000153299.d ENSGT00940000154344.a Yarkand deer MODERN SPECIES 1323 ENSCHYG00000021132 GAB3 (ENSCHYG00000020865) DKC1 (ENSCHYG00000020555) MPP1 (ENSCHYG00000020123) ENSCHYG00000020059 F8 (ENSCHYG00000019104) FUNDC2 (ENSCHYG00000018987) CMC4 (ENSCHYG00000018917) MTCP1 (ENSCHYG00000018801) #8 ENSCHYG00000018655 ##9 ENSCHYG00000018338 #12 RAB39B (ENSCHYG00000018283) #14 CLIC2 (ENSCHYG00000018163) #15 ENSCHYG00000018139 #16 SPRY3 (ENSCHYG00000018105) #21 VAMP7 (ENSCHYG00000017918) #22 Percora_a ANCESTRAL SPECIES 30 ENSGT00390000005685 ENSGT00940000160294 ENSGT00390000016992 #17 ENSGT00940000154783.f ENSGT00390000012647 ENSGT00390000006885.a #8 ENSGT00390000000360.r.d.b ##9 ENSGT00950000183068.a.a #12 ENSGT00390000018904 #13 ENSGT00940000158132 #14 ENSGT00940000161397 #15 ENSGT00940000163020.bb #16 ENSGT00530000063582.a #18 ENSGT00950000185382 ENSGT00950000183055.a.b #21 ENSGT00510000047733 #22 ENSGT00530000063872.A ENSGT00940000158229 ENSGT00940000155935 ENSGT00940000162167 ENSGT00940000159444 ENSGT00940000154972 ENSGT00940000161201 ENSGT00940000155374 ENSGT00390000006832 ENSGT00940000160946 ENSGT00530000064765 ENSGT00390000017980 ENSGT00940000160515 ENSGT00940000153299.d ENSGT00940000154344.a Siberian musk deer MODERN SPECIES 67 MPP1 (ENSMMSG00000011258) SMIM9 (ENSMMSG00000011384) F8 (ENSMMSG00000011419) ENSMMSG00000011482 CMC4 (ENSMMSG00000011510) MTCP1 (ENSMMSG00000011532) #8 BRCC3 (ENSMMSG00000011560) ##9 VBP1 (ENSMMSG00000011660) #13 RAB39B (ENSMMSG00000011708) #14 ENSMMSG00000011732 #17 CLIC2 (ENSMMSG00000011739) #15 ENSMMSG00000011761 #16 TMLHE (ENSMMSG00000011781) #18 ENSMMSG00000011850 SPRY3 (ENSMMSG00000011861) #21 VAMP7 (ENSMMSG00000011884) #22 ENSMMSG00000012009 ENSMMSG00000013968 ENSMMSG00000013979 ENSMMSG00000014004 Bovidae ANCESTRAL SPECIES 29 ENSGT00940000160294 ENSGT00390000016992.s #17 ENSGT00940000154783.f ENSGT00390000012647 ENSGT00390000006885.a #8 ENSGT00390000000360.r.d.b ##9 ENSGT00950000183068.a.a #12 ENSGT00390000018904 #13 ENSGT00940000158132 #14 ENSGT00390000016992.t #17 ENSGT00940000163020.bb #16 ENSGT00940000161397 #15 ENSGT00530000063582.a #18 ENSGT00950000185382 ENSGT00950000183055.a.b #21 ENSGT00510000047733 #22 ENSGT00940000161825.v.a.a.b ENSGT00960000188264.C ENSGT00530000063872.A ENSGT00940000158229 ENSGT00940000155935 ENSGT00940000162167 ENSGT00940000159444 ENSGT00940000154972 ENSGT00940000161201 ENSGT00940000155374 ENSGT00390000006832 ENSGT00940000160946 ENSGT00530000064765 ENSGT00390000017980 ENSGT00940000160515 Caprinae ANCESTRAL SPECIES 53 ENSGT00390000005685 ENSGT00940000160294 ENSGT00390000016992.s #17 ENSGT00940000154783.f ENSGT00390000012647 ENSGT00390000006885.a #8 ENSGT00390000000360.r.d.b ##9 ENSGT00950000183068.a.a #12 ENSGT00390000018904 #13 ENSGT00940000158132 #14 ENSGT00390000016992.t #17 ENSGT00940000163020.bb #16 ENSGT00940000161397 #15 ENSGT00950000183055.a.b #21 ENSGT00530000063582.a #18 ENSGT00510000047733 #22 ENSGT00940000161825.v.a.a.b ENSGT00960000188264.C Goat MODERN SPECIES 36 ENSCHIG00000015970 #12 VBP1 (ENSCHIG00000019363) #13 RAB39B (ENSCHIG00000000158) #14 ENSCHIG00000018644 #17 ENSCHIG00000000266 CLIC2 (ENSCHIG00000016619) #15 ENSCHIG00000000748 ##24 TMLHE (ENSCHIG00000000055) #18 VAMP7 (ENSCHIG00000000128) #22 Rambouillet Sheep MODERN SPECIES 205 MPP1 (ENSOARG00020015726) SMIM9 (ENSOARG00020015879) F8 (ENSOARG00020015985) ENSOARG00020016962 #17 FUNDC2 (ENSOARG00020017001) CMC4 (ENSOARG00020017081) MTCP1 (ENSOARG00020017110) #8 BRCC3 (ENSOARG00020017169) ##9 VBP1 (ENSOARG00020017496) #13 RAB39B (ENSOARG00020017597) #14 ENSOARG00020017633 #17 ENSOARG00020017655 #16 RIDA (ENSOARG00020017680) CLIC2 (ENSOARG00020017713) #15 SPRY3 (ENSOARG00020017989) #21 VAMP7 (ENSOARG00020018024) #22 ENSOARG00020018236 ENSOARG00020018387 ENSOARG00020018399 ENSOARG00020018429 ENSOARG00020018446 ENSOARG00020018476 ENSOARG00020018489 ENSOARG00020018504 ENSOARG00020018525 ENSOARG00020018581 ENSOARG00020018615 ENSOARG00020018678 ENSOARG00020018703 ENSOARG00020018745 ENSOARG00020018798 Bovinae ANCESTRAL SPECIES 42 ENSGT00940000158744 ENSGT00940000160294 ENSGT00390000016992.s #17 ENSGT00940000154783.f ENSGT00390000012647 ENSGT00390000006885.a #8 ENSGT00390000000360.r.d.b ##9 ENSGT00950000183068.a.a #12 ENSGT00390000018904 #13 ENSGT00940000158132 #14 ENSGT00390000016992.t #17 ENSGT00940000161397 #15 ENSGT00530000063582.a #18 ENSGT00950000185382 ENSGT00950000183055.a.b #21 ENSGT00510000047733 #22 ENSGT00940000161825.v.a.a.b ENSGT00390000012182.i.a ENSGT00940000161825.v.a.b ENSGT00910000144363.g.a.a.a.a.a ENSGT00530000063872.A ENSGT00940000158229 ENSGT00940000155935 ENSGT00940000162167 ENSGT00940000159444 ENSGT00940000154972 ENSGT00940000161201 ENSGT00940000155374 ENSGT00390000006832 ENSGT00940000160946 ENSGT00530000064765 Bos ANCESTRAL SPECIES 36 ENSGT00940000160294 ENSGT00390000016992.s #17 ENSGT00940000154783.f ENSGT00390000012647 ENSGT00390000006885.a #8 ENSGT00390000000360.r.d.b ##9 ENSGT00950000183068.a.a #12 ENSGT00390000018904 #13 ENSGT00390000000673.b.yb.a ENSGT00940000158132 #14 ENSGT00390000016992.t #17 ENSGT00940000161397 #15 ENSGT00530000063582.a #18 ENSGT00950000185382 ENSGT00950000183055.a.b #21 ENSGT00510000047733 #22 ENSGT00940000161825.v.a.a.b ENSGT00390000012182.i.a.a.a ENSGT00390000012182.i.b ENSGT00940000161825.v.b ENSGT00530000063872.A ENSGT00940000158229 ENSGT00940000155935 ENSGT00940000162167 ENSGT01030000235010.e.b ENSGT00940000159444 ENSGT00940000154972 ENSGT00940000161201 ENSGT00940000155374 ENSGT00390000006832 ENSGT00940000160946 Bos_a ANCESTRAL SPECIES 39 ENSGT00510000047092 ENSGT00940000158744 ENSGT00940000160294 ENSGT00940000154783.f ENSGT00390000012647 ENSGT00390000006885.a #8 ENSGT00390000000360.r.d.b ##9 ENSGT00950000183068.a.a #12 ENSGT00390000018904 #13 ENSGT00390000000673.b.yb.a ENSGT00940000158132 #14 ENSGT00390000016992.t #17 ENSGT00940000161397 #15 ENSGT00530000063582.a #18 ENSGT00950000183055.a.b #21 ENSGT00510000047733 #22 ENSGT00940000161825.v.a.a.b ENSGT00390000012182.i.a.a.a Domestic yak MODERN SPECIES 69 ENSBGRG00000017378 #17 F8 (ENSBGRG00000024985) FUNDC2 (ENSBGRG00000024951) ENSBGRG00000024933 MTCP1 (ENSBGRG00000024911) #8 BRCC3 (ENSBGRG00000024843) ##9 ENSBGRG00000024824 ENSBGRG00000024794 #12 VBP1 (ENSBGRG00000024762) #13 ENSBGRG00000024744 RAB39B (ENSBGRG00000024738) #14 ENSBGRG00000024735 #17 CLIC2 (ENSBGRG00000024695) #15 TMLHE (ENSBGRG00000024645) #18 SPRY3 (ENSBGRG00000024611) #21 VAMP7 (ENSBGRG00000024507) #22 ENSBGRG00000024491 ENSBGRG00000024481 ENSBGRG00000024460 ENSBGRG00000024444 ENSBGRG00000024428 ENSBGRG00000024396 MTM1 (ENSBGRG00000024246) MTMR1 (ENSBGRG00000023860) CD99L2 (ENSBGRG00000023715) ENSBGRG00000023671 GPR50 (ENSBGRG00000023639) ENSBGRG00000023594 ENSBGRG00000023537 PRRG3 (ENSBGRG00000023519) ENSBGRG00000023506 Wild yak MODERN SPECIES 1152 CLIC2 (ENSBMUG00000010104) #15 TMLHE (ENSBMUG00000010079) #18 SPRY3 (ENSBMUG00000010058) #21 VAMP7 (ENSBMUG00000010034) #22 ENSBMUG00000010013 ENSBMUG00000010002 Bos_b ANCESTRAL SPECIES 31 ENSGT00940000160294 ENSGT00390000016992.s #17 ENSGT00940000154783.f ENSGT00390000012647 ENSGT00390000006885.a #8 ENSGT00390000000360.r.d.b ##9 ENSGT00950000183068.a.a #12 ENSGT00390000018904 #13 ENSGT00390000000673.b.yb.a ENSGT00940000158132 #14 ENSGT00390000016992.t #17 ENSGT00940000161397 #15 ENSGT00530000063582.a #18 ENSGT00950000185382 ENSGT00950000183055.a.b #21 ENSGT00510000047733 #22 ENSGT00940000161825.v.a.a.b ENSGT00390000012182.i.a.a.a ENSGT00390000012182.i.b ENSGT00940000161825.v.b ENSGT00530000063872.A ENSGT00940000158229 ENSGT00940000155935 ENSGT00940000162167 ENSGT01030000235010.e.b ENSGT00940000159444 ENSGT00940000154972 ENSGT00940000161201 ENSGT00940000155374 ENSGT00390000006832 ENSGT00940000160946 Cow MODERN SPECIES 177 MPP1 (ENSBTAG00000013046) ENSBTAG00000033167 #17 F8 (ENSBTAG00000010726) FUNDC2 (ENSBTAG00000016977) CMC4 (ENSBTAG00000007813) MTCP1 (ENSBTAG00000045697) #8 BRCC3 (ENSBTAG00000007817) ##9 ENSBTAG00000011144 #12 VBP1 (ENSBTAG00000017265) #13 ENSBTAG00000052586 RAB39B (ENSBTAG00000019779) #14 ENSBTAG00000023978 #17 CLIC2 (ENSBTAG00000010948) #15 TMLHE (ENSBTAG00000011648) #18 SPRY3 (ENSBTAG00000010245) #21 VAMP7 (ENSBTAG00000049615) #22 ZNF185 (ENSBTAG00000005776) NSDHL (ENSBTAG00000009231) CETN2 (ENSBTAG00000007844) GABRQ (ENSBTAG00000013002) ENSBTAG00000048998 GABRA3 (ENSBTAG00000006691) ENSBTAG00000012748 GABRE (ENSBTAG00000013548) CNGA2 (ENSBTAG00000020725) FATE1 (ENSBTAG00000006820) PRRG3 (ENSBTAG00000009775) ENSBTAG00000050821 VMA21 (ENSBTAG00000006296) GPR50 (ENSBTAG00000005950) HMGB3 (ENSBTAG00000005150) Hybrid Bos Indicus MODERN SPECIES 315 FUNDC2 (ENSBIXG00005006322) CMC4 (ENSBIXG00005001057) MTCP1 (ENSBIXG00005011273) #8 BRCC3 (ENSBIXG00005001036) ##9 ENSBIXG00005011073 #12 VBP1 (ENSBIXG00005011035) #13 ENSBIXG00005010980 RAB39B (ENSBIXG00005010970) #14 ENSBIXG00005010957 #17 ENSBIXG00005000980 CLIC2 (ENSBIXG00005010938) #15 ENSBIXG00005010929 TMLHE (ENSBIXG00005000964) #18 ENSBIXG00005010854 SPRY3 (ENSBIXG00005010830) #21 VAMP7 (ENSBIXG00005010795) #22 ENSBIXG00005010749 ENSBIXG00005010717 ENSBIXG00005000928 ENSBIXG00005000922 ENSBIXG00005010675 ZNF185 (ENSBIXG00005000655) NSDHL (ENSBIXG00005010561) CETN2 (ENSBIXG00005010528) GABRQ (ENSBIXG00005010442) ENSBIXG00005000879 GABRA3 (ENSBIXG00005001938) MAGEA10 (ENSBIXG00005029058) GABRE (ENSBIXG00005029043) CNGA2 (ENSBIXG00005002074) ENSBIXG00005028994 Cetacea ANCESTRAL SPECIES 19 ENSGT00940000160294 ENSGT00940000163020 #16 ENSGT00390000016992 #17 ENSGT00940000154783.f.d.a ENSGT00390000012647 ENSGT00390000006885.a #8 ENSGT00390000000360.q.a ##9 ENSGT00390000000360.r.d ##9 ENSGT00950000183068.a.a #12 ENSGT00390000018904 #13 ENSGT00940000158132 #14 ENSGT00940000161397 #15 ENSGT00530000063582.a #18 ENSGT00950000185382 ENSGT00950000183055.a.b #21 ENSGT00510000047733 #22 Blue whale MODERN SPECIES 40 ENSBMSG00010021592 #17 ENSBMSG00010021604 CMC4 (ENSBMSG00010021610) MTCP1 (ENSBMSG00010021613) #8 BRCC3 (ENSBMSG00010021621) ##9 ENSBMSG00010021641 #12 VBP1 (ENSBMSG00010021651) #13 RAB39B (ENSBMSG00010021663) #14 ENSBMSG00010021665 #17 ENSBMSG00010021668 #16 CLIC2 (ENSBMSG00010021672) #15 ENSBMSG00010021679 #16 TMLHE (ENSBMSG00010021682) #18 ENSBMSG00010021687 SPRY3 (ENSBMSG00010021692) #21 VAMP7 (ENSBMSG00010021700) #22 Odontoceti ANCESTRAL SPECIES 19 ENSGT00940000160294 ENSGT00940000163020 #16 ENSGT00390000016992 #17 ENSGT00940000154783.f.d.a ENSGT00390000012647 ENSGT00390000006885.a #8 ENSGT00390000000360.q.a ##9 ENSGT00390000000360.r.d ##9 ENSGT00950000183068.a.a #12 ENSGT00390000018904 #13 ENSGT00940000158132 #14 ENSGT00940000161397 #15 ENSGT00530000063582.a #18 ENSGT00950000185382 ENSGT00950000183055.a.b #21 ENSGT00510000047733 #22 Sperm whale DUPLICATION Sperm whale MODERN SPECIES 12 FUT11 (ENSPCTG00005019182) SEC24C (ENSPCTG00005019137) SYNPO2L (ENSPCTG00005019094) MYOZ1 (ENSPCTG00005019062) USP54 (ENSPCTG00005018794) PPP3CB (ENSPCTG00005018219) ENSPCTG00005018112 ANXA7 (ENSPCTG00005018039) ENSPCTG00005018005 CFAP70 (ENSPCTG00005017829) MRPS16 (ENSPCTG00005017751) DNAJC9 (ENSPCTG00005017690) FAM149B1 (ENSPCTG00005017627) ECD (ENSPCTG00005017574) NUDT13 (ENSPCTG00005017423) ENSPCTG00005017352 #22 P4HA1 (ENSPCTG00005017193) PLA2G12B (ENSPCTG00005017127) OIT3 (ENSPCTG00005016947) ENSPCTG00005016898 MCU (ENSPCTG00005016821) MICU1 (ENSPCTG00005016668) ANAPC16 (ENSPCTG00005016583) ASCC1 (ENSPCTG00005016464) ENSPCTG00005016423 CHST3 (ENSPCTG00005016377) VSIR (ENSPCTG00005016352) C20H10orf105 (ENSPCTG00005016335) ENSPCTG00005016034 SLC29A3 (ENSPCTG00005015832) PCBD1 (ENSPCTG00005015772) Sperm whale MODERN SPECIES 13 F8 (ENSPCTG00005015296) ENSPCTG00005015667 #16 F8A1 (ENSPCTG00005015687) #17 FUNDC2 (ENSPCTG00005015711) CMC4 (ENSPCTG00005015746) MTCP1 (ENSPCTG00005015780) #8 BRCC3 (ENSPCTG00005015822) ##9 VBP1 (ENSPCTG00005016073) #13 RAB39B (ENSPCTG00005016182) #14 ENSPCTG00005016223 #16 CLIC2 (ENSPCTG00005016241) #15 ENSPCTG00005016292 #16 TMLHE (ENSPCTG00005016307) #18 ENSPCTG00005016361 SPRY3 (ENSPCTG00005016380) #21 ENSPCTG00005016415 #22 Odontoceti_a ANCESTRAL SPECIES 21 ENSGT00940000160294 ENSGT00940000163020 #16 ENSGT00390000016992 #17 ENSGT00940000154783.f.d.a ENSGT00390000012647 ENSGT00390000006885.a #8 ENSGT00390000000360.q.a ##9 ENSGT00390000000360.r.d ##9 ENSGT00950000183068.a.a #12 ENSGT00390000018904 #13 ENSGT00940000158132 #14 ENSGT00940000161397 #15 ENSGT00530000063582.a #18 ENSGT00950000185382 ENSGT00950000183055.a.b #21 ENSGT00510000047733 #22 Dolphin MODERN SPECIES 6836 VAMP7 (ENSTTRG00000010643) #22 Odontoceti_b ANCESTRAL SPECIES 17 ENSGT00390000016992.x #17 ENSGT00940000154783.f.d.a ENSGT00390000012647 ENSGT00390000006885.a #8 ENSGT00390000000360.q.a ##9 ENSGT00390000000360.r.d ##9 ENSGT00950000183068.a.a #12 ENSGT00390000018904 #13 ENSGT00940000158132 #14 ENSGT00390000016992.w #17 ENSGT00940000163020.z #16 ENSGT00940000161397 #15 ENSGT00530000063582.a #18 ENSGT00950000185382 ENSGT00950000183055.a.b #21 ENSGT00510000047733 #22 Monodontidae ANCESTRAL SPECIES 19 ENSGT00940000163020.z #16 ENSGT00390000016992.w #17 ENSGT00940000154783.f.d.a ENSGT00390000012647 ENSGT00390000006885.a #8 ENSGT00390000000360.q.a ##9 ENSGT00950000183068.a.a #12 ENSGT00390000018904 #13 ENSGT00940000158132 #14 ENSGT00390000016992.x #17 ENSGT00940000161397 #15 ENSGT00940000163020.y #16 ENSGT00530000063582.a #18 ENSGT00950000185382 ENSGT00950000183055.a.b #21 ENSGT00510000047733 #22 Narwhal MODERN SPECIES 310 F8 (ENSMMNG00015013732) ENSMMNG00015013765 #16 ENSMMNG00015013774 ENSMMNG00015013784 CMC4 (ENSMMNG00015013793) MTCP1 (ENSMMNG00015013799) #8 BRCC3 (ENSMMNG00015013819) ##9 ENSMMNG00015013846 #12 VBP1 (ENSMMNG00015013861) #13 RAB39B (ENSMMNG00015013876) #14 CLIC2 (ENSMMNG00015013884) #15 ENSMMNG00015013897 #16 TMLHE (ENSMMNG00015013910) #18 ENSMMNG00015013925 SPRY3 (ENSMMNG00015013931) #21 VAMP7 (ENSMMNG00015013948) #22 DUSP22 (ENSMMNG00015013987) IRF4 (ENSMMNG00015014004) EXOC2 (ENSMMNG00015014030) FOXF2 (ENSMMNG00015014085) FOXC1 (ENSMMNG00015014093) GMDS (ENSMMNG00015014105) ENSMMNG00015010189 MYLK4 (ENSMMNG00015010218) ENSMMNG00015010243 WRNIP1 (ENSMMNG00015010266) ENSMMNG00015010309 NQO2 (ENSMMNG00015010357) RIPK1 (ENSMMNG00015010383) BPHL (ENSMMNG00015010397) TUBB2B (ENSMMNG00015010464) Beluga whale MODERN SPECIES 139 F8 (ENSDLEG00000011690) ENSDLEG00000011965 #16 ENSDLEG00000011977 #17 FUNDC2 (ENSDLEG00000011985) CMC4 (ENSDLEG00000011999) MTCP1 (ENSDLEG00000012008) #8 BRCC3 (ENSDLEG00000012025) ##9 ENSDLEG00000012046 #12 VBP1 (ENSDLEG00000012075) #13 RAB39B (ENSDLEG00000012091) #14 ENSDLEG00000012094 #17 CLIC2 (ENSDLEG00000012100) #15 TMLHE (ENSDLEG00000012114) #18 ENSDLEG00000012124 SPRY3 (ENSDLEG00000012130) #21 VAMP7 (ENSDLEG00000012138) #22 Vaquita MODERN SPECIES 34 ENSPSNG00000022476 #17 ENSPSNG00000022480 MTCP1 (ENSPSNG00000022484) #8 CMC4 (ENSPSNG00000013473) BRCC3 (ENSPSNG00000013597) ##9 ENSPSNG00000013729 #12 VBP1 (ENSPSNG00000013871) #13 RAB39B (ENSPSNG00000014023) #14 ENSPSNG00000014068 #17 CLIC2 (ENSPSNG00000014084) #15 ENSPSNG00000014126 #16 TMLHE (ENSPSNG00000014201) #18 ENSPSNG00000014251 ENSPSNG00000014269 SPRY3 (ENSPSNG00000014299) #21 VAMP7 (ENSPSNG00000014345) #22 Atlantogenata ANCESTRAL SPECIES 70 ENSGT00940000159803 ENSGT00510000047092 ENSGT00940000158744 ENSGT00390000005685 ENSGT00390000016992 #17 ENSGT00940000160294 ENSGT00940000154783 ENSGT00390000012647 ENSGT00390000006885.a #8 ENSGT00390000000360 #9 ENSGT00950000183068.a.a #12 ENSGT00390000018904 #13 ENSGT00940000158132 #14 ENSGT00940000161397 #15 ENSGT00950000183055.a.b #21 ENSGT00510000047733 #22 Xenarthra ANCESTRAL SPECIES 1902 ENSGT00950000183055.a.b #21 ENSGT00510000047733 #22 Armadillo MODERN SPECIES 645 SPRY3 (ENSDNOG00000000635) #21 VAMP7 (ENSDNOG00000037896) #22 Sloth MODERN SPECIES 2074 ENSCHOG00000004846 #22 Afrotheria ANCESTRAL SPECIES 82 ENSGT00510000047092 ENSGT00940000158744 ENSGT00390000005685 ENSGT00390000016992 #17 ENSGT00940000160294 ENSGT00940000154783 ENSGT00390000012647 ENSGT00390000006885.a #8 ENSGT00390000000360 #9 ENSGT00390000018904 #13 ENSGT00940000158132 #14 ENSGT00940000161397 #15 ENSGT00940000163020 #16 ENSGT00530000063582.a #18 ENSGT00950000183055.a.b #21 ENSGT00510000047733 #22 Tenrec MODERN SPECIES 2296 VAMP7 (ENSETEG00000010894) #22 Afrotheria_a ANCESTRAL SPECIES 81 ENSGT00510000047092 ENSGT00940000158744 ENSGT00390000005685 ENSGT00390000016992 #17 ENSGT00940000160294 ENSGT00940000154783 ENSGT00390000012647 ENSGT00390000006885.a #8 ENSGT00390000000360 #9 ENSGT00390000018904 #13 ENSGT00940000158132 #14 ENSGT00940000161397 #15 ENSGT00940000163020 #16 ENSGT00530000063582.a #18 ENSGT00950000183055.a.b #21 ENSGT00510000047733 #22 Elephant MODERN SPECIES 50 MPP1 (ENSLAFG00000011928) SMIM9 (ENSLAFG00000032056) ENSLAFG00000003610 #17 F8 (ENSLAFG00000015274) ENSLAFG00000015289 CMC4 (ENSLAFG00000020599) MTCP1 (ENSLAFG00000028512) #8 BRCC3 (ENSLAFG00000013564) #9 VBP1 (ENSLAFG00000016507) #13 RAB39B (ENSLAFG00000030959) #14 CLIC2 (ENSLAFG00000011243) #15 ENSLAFG00000032481 #16 TMLHE (ENSLAFG00000011892) #18 ENSLAFG00000012249 SPRY3 (ENSLAFG00000029407) #21 VAMP7 (ENSLAFG00000018052) #22 ENSLAFG00000027692 Hyrax MODERN SPECIES 1858 ENSPCAG00000003747 #22 Marsupialia ANCESTRAL SPECIES 39 ENSGT00940000153700.jc.a.a.a.a ENSGT00940000162502 ENSGT00530000063582.a #18 ENSGT00950000183055.a.b #21 ENSGT00510000047733 #22 ENSGT00390000017860.a.a ENSGT00390000016992 #17 ENSGT00940000161397 #15 ENSGT00940000158132 #14 ENSGT00390000018904 #13 ENSGT00950000183068.a.a #12 ENSGT00390000000360 #9 ENSGT00390000006885.a #8 ENSGT00390000012647 ENSGT00940000154783 ENSGT00940000160294 ENSGT00940000158744 ENSGT00510000047092 ENSGT00940000159803 ENSGT01100000263570.B.z Marsupialia_b ANCESTRAL SPECIES 35 ENSGT00940000153700.jc.a.a.a.a ENSGT00940000162502 ENSGT00530000063582.a #18 ENSGT00950000183055.a.b #21 ENSGT00510000047733 #22 ENSGT00390000017860.a.a ENSGT00390000016992 #17 ENSGT00940000161397 #15 ENSGT00940000158132 #14 ENSGT00390000018904.xb #13 ENSGT00950000183068.a.a #12 ENSGT00390000000360 #9 ENSGT00390000006885.a #8 ENSGT00390000012647 ENSGT00940000154783 ENSGT00940000160294 ENSGT00940000158744 ENSGT00510000047092 ENSGT00940000159803 ENSGT01100000263570.B.z Diprotodontia ANCESTRAL SPECIES 79 ENSGT00940000162502 ENSGT00530000063582.a #18 ENSGT00950000183055.a.b #21 ENSGT00510000047733 #22 ENSGT00390000017860.a.a ENSGT00390000016992 #17 ENSGT00940000161397 #15 ENSGT00940000158132 #14 ENSGT00390000018904.xb #13 ENSGT00950000183068.a.a #12 ENSGT00390000000360 #9 ENSGT00390000006885.a #8 ENSGT00390000012647 ENSGT00940000154783 ENSGT00940000160294 ENSGT00940000158744 ENSGT00510000047092 ENSGT00940000159803 ENSGT01030000240148 Diprotodontia_a ANCESTRAL SPECIES 74 ENSGT00940000162502 ENSGT00530000063582.a #18 ENSGT00950000183055.a.b #21 ENSGT00510000047733 #22 ENSGT00390000017860.a.a ENSGT00390000016992 #17 ENSGT00940000161397 #15 ENSGT00940000158132 #14 ENSGT00390000018904.xb #13 ENSGT00950000183068.a.a #12 ENSGT00390000000360 #9 ENSGT00390000006885.a #8 ENSGT00390000012647 ENSGT00940000154783 ENSGT00940000160294 ENSGT00940000158744 ENSGT00510000047092 ENSGT00940000159803 ENSGT01030000240148 Common wonbat MODERN SPECIES 206 ENSVURG00010021065 ENSVURG00010021068 ENSVURG00010021072 ENSVURG00010021076 FAAH2 (ENSVURG00010021078) TMLHE (ENSVURG00010021084) #18 SPRY3 (ENSVURG00010021087) #21 ENSVURG00010021091 #22 ENSVURG00010021094 ENSVURG00010021099 #17 CLIC2 (ENSVURG00010021105) #15 ENSVURG00010021106 koala MODERN SPECIES 275 ENSPCIG00000032358 ENSPCIG00000029323 TMLHE (ENSPCIG00000029328) #18 SPRY3 (ENSPCIG00000029329) #21 VAMP7 (ENSPCIG00000021213) #22 ENSPCIG00000021211 ENSPCIG00000029331 #17 ENSPCIG00000029332 #15 RAB39B (ENSPCIG00000029333) #14 ENSPCIG00000029334 #13 ENSPCIG00000029335 #12 ENSPCIG00000029336 #9 MTCP1 (ENSPCIG00000029337) #8 CMC4 (ENSPCIG00000012830) FUNDC2 (ENSPCIG00000029338) F8 (ENSPCIG00000029339) MPP1 (ENSPCIG00000016705) DKC1 (ENSPCIG00000016706) GAB3 (ENSPCIG00000027141) ENSPCIG00000027140 Wallaby MODERN SPECIES 3179 VAMP7 (ENSMEUG00000015172) #22 Tasmanian devil MODERN SPECIES 21 ENSSHAG00000023331 ENSSHAG00000022828 ENSSHAG00000028949 ENSSHAG00000006530 ENSSHAG00000003260 ENSSHAG00000005152 ENSSHAG00000000642 ENSSHAG00000006338 ENSSHAG00000023175 ENSSHAG00000021768 ENSSHAG00000028800 ENSSHAG00000023544 ENSSHAG00000028680 ENSSHAG00000005076 #18 ENSSHAG00000027931 #21 ENSSHAG00000005274 #22 ENSSHAG00000027010 ENSSHAG00000003431 ENSSHAG00000002237 #15 ENSSHAG00000030857 RAB39B (ENSSHAG00000023435) #14 ENSSHAG00000002823 #13 ENSSHAG00000000499 #12 ENSSHAG00000005392 #9 ENSSHAG00000031991 FUNDC2 (ENSSHAG00000004767) ENSSHAG00000000596 MPP1 (ENSSHAG00000003104) ENSSHAG00000002463 ENSSHAG00000000766 GAB3 (ENSSHAG00000005588) Opossum MODERN SPECIES 627 ENSMODG00000039236 ENSMODG00000009196 ENSMODG00000009214 ENSMODG00000009225 GAB3 (ENSMODG00000009236) ENSMODG00000048987 DKC1 (ENSMODG00000009243) MPP1 (ENSMODG00000009267) ENSMODG00000050119 ENSMODG00000009313 ENSMODG00000048424 FAAH2 (ENSMODG00000006103) ENSMODG00000006108 TMLHE (ENSMODG00000006132) #18 ENSMODG00000025401 #21 VAMP7 (ENSMODG00000006160) #22 ENSMODG00000028790 ENSMODG00000006206 #17 CLIC2 (ENSMODG00000047773) #15 ENSMODG00000040079 ENSMODG00000004295 ENSMODG00000011427 ENSMODG00000027717 ACSL4 (ENSMODG00000011470) ENSMODG00000037806 TMEM164 (ENSMODG00000025395) AMMECR1 (ENSMODG00000011480) ENSMODG00000029221 ENSMODG00000011492 ENSMODG00000045883 ENSMODG00000011507 Platypus MODERN SPECIES 17 CLIC2 (ENSOANG00000048106) #15 FAAH2 (ENSOANG00000045002) ENSOANG00000008721 BRCC3 (ENSOANG00000008720) #9 MTCP1 (ENSOANG00000036945) #8 CMC4 (ENSOANG00000008719) FUNDC2 (ENSOANG00000037235) ENSOANG00000008717 MPP1 (ENSOANG00000008715) DKC1 (ENSOANG00000008713) TMLHE (ENSOANG00000008712) #18 SPRY3 (ENSOANG00000050813) #21 ENSOANG00000036694 ENSOANG00000050513 ENSOANG00000008708 VAMP7 (ENSOANG00000008702) #22 ENSOANG00000008707 ENSOANG00000048871 ENSOANG00000039157 NSDHL (ENSOANG00000008705) CETN1 (ENSOANG00000045309) ENSOANG00000038565 ENSOANG00000028699 ENSOANG00000044598 ENSOANG00000014487 ENSOANG00000014488 ENSOANG00000014489 ENSOANG00000016041 ENSOANG00000009600 ENSOANG00000001989 ENSOANG00000041690 Sauria ANCESTRAL SPECIES 35 ENSGT00940000162502 ENSGT00530000063484.b.a ENSGT00390000000360 #9 ENSGT00390000006885 #8 ENSGT00390000012647 ENSGT00940000154783 ENSGT00940000160294 ENSGT00940000158744 ENSGT00510000047092 ENSGT00390000016992 #17 ENSGT00530000063582.a #18 ENSGT00950000183055.a.b #21 ENSGT00940000165106 ENSGT01100000263512.a.a.a.a ENSGT00550000075160 ENSGT00510000047733 #22 ENSGT00390000017860.a.a ENSGT00530000063872.A ENSGT00940000158229 ENSGT00940000157209.ib.a ENSGT00940000157209.ib.b ENSGT00390000003706.a.b.a ENSGT00390000015364.a.b.a ENSGT00390000015364.a.b.b ENSGT00390000015700.b ENSGT00940000153941.a.b ENSGT00940000166719 ENSGT00940000163673 ENSGT00940000164016 ENSGT00940000161062 ENSGT00510000046908.b Lepidosauria ANCESTRAL SPECIES 41 ENSGT00530000063484.b.a ENSGT00390000000360 #9 ENSGT00390000006885 #8 ENSGT00390000012647 ENSGT00940000154783 ENSGT00940000160294.j.a ENSGT00940000158744 ENSGT00510000047092 ENSGT00390000016992 #17 ENSGT01060000248589.C ENSGT00530000063582.a #18 ENSGT00950000183055.a.b #21 ENSGT00940000165106 ENSGT01100000263512.a.a.a.a ENSGT00550000075160 ENSGT00510000047733 #22 ENSGT00390000017860.a.a ENSGT00530000063872.A ENSGT00940000158229 ENSGT00940000157209.ib.a ENSGT00390000001134.b ENSGT00950000182994.A ENSGT00390000000141 ENSGT00940000159611 ENSGT00520000059318 ENSGT00950000183121.b.b.b.a ENSGT00530000063666.a ENSGT00940000164237 ENSGT00390000008591 ENSGT00940000159242 ENSGT00940000161429 tuatara MODERN SPECIES 1596 ENSSPUG00000005801 POLR1D (ENSSPUG00000005786) VAMP7 (ENSSPUG00000005776) #22 ENSSPUG00000005744 NSDHL (ENSSPUG00000005730) ENSSPUG00000005716 ENSSPUG00000005710 GPR119 (ENSSPUG00000005701) ENOX2 (ENSSPUG00000005666) GLOD5 (ENSSPUG00000005659) ENSSPUG00000005600 SLC25A14 (ENSSPUG00000005586) ENSSPUG00000005578 RAB33A (ENSSPUG00000005574) MARS2 (ENSSPUG00000005569) ENSSPUG00000005555 AIFM1 (ENSSPUG00000005531) BCORL1 (ENSSPUG00000005508) Episquamata ANCESTRAL SPECIES 14 ENSGT00940000162502 ENSGT00530000063484.b.a ENSGT00390000000360 #9 ENSGT00390000006885 #8 ENSGT00390000012647 ENSGT00940000154783 ENSGT00940000160294.j.a ENSGT00940000158744 ENSGT00510000047092 ENSGT00390000016992 #17 ENSGT00530000063582.a #18 ENSGT00950000183055.a.b #21 ENSGT00940000165106 ENSGT01100000263512.a.a.a.a ENSGT00550000075160 ENSGT00510000047733 #22 ENSGT00390000017860.a.a ENSGT00530000063872.A ENSGT00940000158229 ENSGT00940000157209.ib.a ENSGT00390000001134.b ENSGT00950000182994.A ENSGT00390000000141 ENSGT00940000159611 ENSGT00520000059318 ENSGT00950000183121.b.b.b.a ENSGT00530000063666.a ENSGT00940000164237.`b ENSGT00390000008591 ENSGT00940000159242 ENSGT00940000161429 Toxicofera ANCESTRAL SPECIES 17 ENSGT00530000063484.b.a ENSGT00390000000360 #9 ENSGT00390000006885 #8 ENSGT00390000012647 ENSGT00940000154783 ENSGT00940000160294.j.a ENSGT00940000158744 ENSGT00510000047092 ENSGT00390000016992 #17 ENSGT01060000248589.C ENSGT00530000063582.a #18 ENSGT00950000183055.a.b #21 ENSGT00940000165106 ENSGT01100000263512.a.a.a.a ENSGT00550000075160 ENSGT00510000047733 #22 ENSGT00390000017860.a.a ENSGT00530000063872.A ENSGT00940000158229 ENSGT00940000157209.ib.a ENSGT00390000001134.b ENSGT00950000182994.A ENSGT00390000000141 ENSGT00940000159611 ENSGT00520000059318 ENSGT00950000183121.b.b.b.a ENSGT00530000063666.a ENSGT00940000164237.ab ENSGT00940000164237.`b ENSGT00390000008591 ENSGT00940000159242 Elapidae ANCESTRAL SPECIES 14 ENSGT00530000063484.b.a ENSGT00390000000360 #9 ENSGT00390000006885 #8 ENSGT00390000012647 ENSGT00940000154783 ENSGT00940000160294.j.a ENSGT00940000158744 ENSGT00510000047092 ENSGT00390000016992 #17 ENSGT01060000248589.C ENSGT00530000063582.a #18 ENSGT00950000183055.a.b #21 ENSGT00940000165106 ENSGT01100000263512.a.a.a.a ENSGT00550000075160 ENSGT00510000047733 #22 ENSGT00390000017860.a.a ENSGT00530000063872.A ENSGT00940000158229 ENSGT00940000157209.ib.a ENSGT00390000001134.b ENSGT00950000182994.A.l ENSGT00390000000141 ENSGT00940000159611 ENSGT00520000059318 ENSGT00950000183121.b.b.b.a ENSGT00530000063666.a ENSGT00940000164237.ab ENSGT00390000008591 ENSGT00940000159242 ENSGT00940000161429 Elapidae_a ANCESTRAL SPECIES 30 ENSGT00390000000360 #9 ENSGT00390000006885 #8 ENSGT00390000012647 ENSGT00940000154783 ENSGT00940000160294.j.a ENSGT00940000160294.j.b ENSGT00940000158744 ENSGT00510000047092 ENSGT00390000016992 #17 ENSGT01060000248589.C ENSGT00530000063582.a #18 ENSGT00950000183055.a.b #21 ENSGT00940000165106 ENSGT01100000263512.a.a.a.a ENSGT00550000075160 ENSGT00510000047733 #22 ENSGT00390000017860.a.a ENSGT00530000063872.A ENSGT00940000158229 ENSGT00940000157209.ib.a ENSGT00390000001134.b ENSGT00950000182994.A.l ENSGT00390000000141 ENSGT00940000159611 ENSGT00990000205517 ENSGT00950000183121.b.b.b.a ENSGT00530000063666.a ENSGT00940000164237.`b ENSGT00390000008591 ENSGT00940000159242 ENSGT00940000161429 Acanthophiinae ANCESTRAL SPECIES 20 ENSGT00390000000360 #9 ENSGT00390000006885 #8 ENSGT00390000012647 ENSGT00940000154783 ENSGT00940000160294.j.a ENSGT00940000160294.j.b ENSGT00940000158744 ENSGT00510000047092 ENSGT00390000016992 #17 ENSGT01060000248589.C ENSGT00530000063582.a #18 ENSGT00950000183055.a.b #21 ENSGT00940000165106 ENSGT01100000263512.a.a.a.a ENSGT00550000075160 ENSGT00510000047733 #22 ENSGT00390000017860.a.a ENSGT00940000158229 ENSGT00940000157209.ib.a ENSGT00390000001134.b ENSGT00950000182994.A.l ENSGT00390000000141 ENSGT00940000159611 ENSGT00990000205517 ENSGT00950000183121.b.b.b.a ENSGT00530000063666.a ENSGT00940000164237.`b ENSGT00390000008591 ENSGT00940000159242 ENSGT00940000161429 ENSGT00390000017581.a Eastern brown snake MODERN SPECIES 20 FAAH2 (ENSPTXG00000004585) BRCC3 (ENSPTXG00000004587) #9 CMC4 (ENSPTXG00000004591) ENSPTXG00000004594 #8 FUNDC2 (ENSPTXG00000004596) ENSPTXG00000004604 ENSPTXG00000004605 MPP1 (ENSPTXG00000004606) DKC1 (ENSPTXG00000004607) ENSPTXG00000004612 #17 ENSPTXG00000004614 TMLHE (ENSPTXG00000004616) #18 ENSPTXG00000004620 ENSPTXG00000004623 POLR1D (ENSPTXG00000004628) VAMP7 (ENSPTXG00000004629) #22 ENSPTXG00000004630 NSDHL (ENSPTXG00000004632) ENSPTXG00000004633 DACH2 (ENSPTXG00000004636) ENSPTXG00000004640 POF1B (ENSPTXG00000004728) ZNF711 (ENSPTXG00000004741) ENSPTXG00000004745 APOOL (ENSPTXG00000004749) ENSPTXG00000004751 ENSPTXG00000004753 HDX (ENSPTXG00000004754) RPS6KA6 (ENSPTXG00000004755) ENSPTXG00000004757 ENSPTXG00000004758 Mainland tiger snake MODERN SPECIES 64 CLIC2 (ENSNSUG00000000577) #15 BRCC3 (ENSNSUG00000000576) #9 ENSNSUG00000000575 #8 CMC4 (ENSNSUG00000000570) FUNDC2 (ENSNSUG00000000566) ENSNSUG00000000221 MPP1 (ENSNSUG00000000204) DKC1 (ENSNSUG00000000145) ENSNSUG00000000141 #17 ENSNSUG00000000136 TMLHE (ENSNSUG00000000095) #18 SPRY3 (ENSNSUG00000000072) #21 ENSNSUG00000000065 ENSNSUG00000000043 POLR1D (ENSNSUG00000000015) VAMP7 (ENSNSUG00000020640) #22 NSDHL (ENSNSUG00000020639) ENSNSUG00000020638 ENSNSUG00000020637 POF1B (ENSNSUG00000020636) ZNF711 (ENSNSUG00000020635) ENSNSUG00000020634 ENSNSUG00000020633 ENSNSUG00000020631 HDX (ENSNSUG00000020630) RPS6KA6 (ENSNSUG00000020629) POU3F4 (ENSNSUG00000020628) ENSNSUG00000020627 ENSNSUG00000020626 ENSNSUG00000020625 ENSNSUG00000020624 Blue-lipped sea krait MODERN SPECIES 4250 POLR1D (ENSLLTG00000005010) VAMP7 (ENSLLTG00000005028) #22 ENSLLTG00000003010 ENSLLTG00000003028 Indian cobra MODERN SPECIES 13 FAAH2 (ENSNNAG00000012349) ENSNNAG00000012332 BRCC3 (ENSNNAG00000012319) #9 ENSNNAG00000012311 #8 CMC4 (ENSNNAG00000012270) FUNDC2 (ENSNNAG00000012248) ENSNNAG00000011961 MPP1 (ENSNNAG00000011904) DKC1 (ENSNNAG00000011820) ENSNNAG00000011801 #17 ENSNNAG00000011739 TMLHE (ENSNNAG00000011710) #18 SPRY3 (ENSNNAG00000011696) #21 ENSNNAG00000011207 POLR1D (ENSNNAG00000011122) VAMP7 (ENSNNAG00000011027) #22 ENSNNAG00000010868 NSDHL (ENSNNAG00000010830) ENSNNAG00000010804 DACH2 (ENSNNAG00000010642) ENSNNAG00000010418 POF1B (ENSNNAG00000010293) ZNF711 (ENSNNAG00000010263) ENSNNAG00000010213 ENSNNAG00000010176 APOOL (ENSNNAG00000010158) ENSNNAG00000018865 HDX (ENSNNAG00000018861) RPS6KA6 (ENSNNAG00000018764) ENSNNAG00000018731 ENSNNAG00000018723 Lizard MODERN SPECIES 816 ENSACAG00000029095 ENSACAG00000015165 ENSACAG00000043048 ENSACAG00000015305 ENSACAG00000015346 ENSACAG00000015354 ENSACAG00000015500 ENSACAG00000015502 ENSACAG00000015600 ENSACAG00000015665 #17 ENSACAG00000026028 TMLHE (ENSACAG00000015669) #18 SPRY3 (ENSACAG00000015693) #21 ENSACAG00000015705 ENSACAG00000015753 VAMP7 (ENSACAG00000015766) #22 ENSACAG00000015810 ENSACAG00000015811 ENSACAG00000015812 CETN1 (ENSACAG00000042849) DACH2 (ENSACAG00000013802) ENSACAG00000013859 ZNF711 (ENSACAG00000014034) ENSACAG00000031924 ENSACAG00000014050 APOOL (ENSACAG00000014061) ENSACAG00000042317 ENSACAG00000040757 ENSACAG00000036836 ENSACAG00000014086 HDX (ENSACAG00000014116) Laterata ANCESTRAL SPECIES 31 ENSGT00940000165106 ENSGT01100000263512.a.a.a.a ENSGT00550000075160 ENSGT00510000047733 #22 ENSGT00390000017860.a.a ENSGT00530000063872.A ENSGT00940000158229 ENSGT00940000157209.ib.a ENSGT00390000001134.b ENSGT00950000182994.A ENSGT00390000000141 ENSGT00940000159611 ENSGT00520000059318 ENSGT00950000183121.b.b.b.a ENSGT00530000063666.a ENSGT00940000164237.`b ENSGT00390000008591 ENSGT00940000159242 ENSGT00940000161429 Common wall lizard MODERN SPECIES 419 ENSPMRG00000020472 ENSPMRG00000020461 ENSPMRG00000020449 ENSPMRG00000020442 ENSPMRG00000020440 ENSPMRG00000020435 ENSPMRG00000020432 ENSPMRG00000020431 ENSPMRG00000020427 ENSPMRG00000020425 TMLHE (ENSPMRG00000020417) #18 SPRY3 (ENSPMRG00000020410) #21 ENSPMRG00000020405 ENSPMRG00000020402 ENSPMRG00000020394 VAMP7 (ENSPMRG00000020384) #22 ENSPMRG00000020370 ENSPMRG00000020358 NSDHL (ENSPMRG00000020350) ENSPMRG00000020340 DACH2 (ENSPMRG00000020308) ENSPMRG00000020265 POF1B (ENSPMRG00000020241) ZNF711 (ENSPMRG00000020229) ENSPMRG00000020215 ENSPMRG00000020196 APOOL (ENSPMRG00000020173) ENSPMRG00000020137 HDX (ENSPMRG00000020114) ENSPMRG00000020105 RPS6KA6 (ENSPMRG00000019568) Argentine black and white tegu MODERN SPECIES 75 ENSSMRG00000008378 ENSSMRG00000008379 POLR1D (ENSSMRG00000008381) VAMP7 (ENSSMRG00000008383) #22 ENSSMRG00000008384 ENSSMRG00000008386 NSDHL (ENSSMRG00000008401) ENSSMRG00000008408 DACH2 (ENSSMRG00000008420) ENSSMRG00000008459 POF1B (ENSSMRG00000008469) ZNF711 (ENSSMRG00000008476) ENSSMRG00000008481 APOOL (ENSSMRG00000008484) ENSSMRG00000008499 ENSSMRG00000008508 HDX (ENSSMRG00000008512) RPS6KA6 (ENSSMRG00000008523) POU3F4 (ENSSMRG00000008536) Archelosauria ANCESTRAL SPECIES 37 ENSGT00940000162502 ENSGT00530000063484.b.a ENSGT00390000000360 #9 ENSGT00390000006885 #8 ENSGT00390000012647 ENSGT00940000154783 ENSGT00940000160294 ENSGT00940000158744 ENSGT00510000047092 ENSGT00390000016992 #17 ENSGT00530000063582.a #18 ENSGT00950000183055.a.b #21 ENSGT00940000165106 ENSGT01100000263512.a.a.a.a ENSGT00550000075160 ENSGT00510000047733 #22 ENSGT00390000017860.a.a ENSGT00530000063872.A ENSGT00940000158229 ENSGT00940000157209.ib.a ENSGT00940000157209.ib.b ENSGT00390000003706.a.b.a ENSGT00390000015364.a.b.a ENSGT00390000015364.a.b.b ENSGT00390000015700.b ENSGT00940000153941.a.b ENSGT00940000166719 ENSGT00940000163673 ENSGT00940000164016 ENSGT00940000161062 ENSGT00510000046908.b Cryptodira ANCESTRAL SPECIES 64 ENSGT00940000162502 ENSGT00530000063484.b.a ENSGT00390000000360 #9 ENSGT00390000006885 #8 ENSGT00390000012647 ENSGT00940000154783 ENSGT00940000160294 ENSGT00940000158744 ENSGT00510000047092 ENSGT00390000016992 #17 ENSGT00530000063582.a #18 ENSGT00950000183055.a.b #21 ENSGT00940000165106 ENSGT01100000263512.a.a.a.a ENSGT00550000075160 ENSGT00510000047733 #22 ENSGT00390000017860.a.a ENSGT00940000158229 ENSGT00940000157209.ib.a Testudinoidea ANCESTRAL SPECIES 9 ENSGT00530000063484.b.a ENSGT00390000000360 #9 ENSGT00390000006885 #8 ENSGT00390000012647 ENSGT00940000154783 ENSGT00940000160294.g ENSGT00940000160294.h ENSGT00940000158744 ENSGT00510000047092 ENSGT00390000016992 #17 ENSGT00530000063582.a #18 ENSGT00950000183055.a.b #21 ENSGT00940000165106 ENSGT01100000263512.a.a.a.a ENSGT00550000075160 ENSGT00510000047733 #22 ENSGT00390000017860.a.a ENSGT00940000158229 ENSGT00940000157209.ib.a ENSGT00940000161104 ENSGT01030000235137 ENSGT00940000157773 ENSGT00940000156970 ENSGT00940000158597 ENSGT00940000162100 ENSGT00940000157403 ENSGT00940000156474 ENSGT01030000234527.B ENSGT00940000153241.B ENSGT01050000244976.b.b.b.a.a.b ENSGT00940000162689 Emydidae ANCESTRAL SPECIES 3 ENSGT01100000263512.a.a.a.a ENSGT00550000075160 ENSGT00510000047733 #22 ENSGT00390000017860.a.a ENSGT00940000158229 ENSGT00940000157209.ib.a ENSGT00940000161104 ENSGT01030000235137 ENSGT00940000157773 ENSGT00940000158597 ENSGT00940000162100 ENSGT00940000157403 ENSGT00940000156474 ENSGT01030000234527.B ENSGT00940000153241.B ENSGT01050000244976.b.b.b.a.a.b ENSGT00940000160730.g ENSGT00460000041648 Three-toed box turtle MODERN SPECIES 281 ENSTMTG00000010585 POLR1D (ENSTMTG00000010557) VAMP7 (ENSTMTG00000010533) #22 ENSTMTG00000010497 NSDHL (ENSTMTG00000010471) ENSTMTG00000010457 AIRE (ENSTMTG00000010418) ENSTMTG00000010402 SCLY (ENSTMTG00000010329) KLHL30 (ENSTMTG00000010249) ERFE (ENSTMTG00000010209) ILKAP (ENSTMTG00000010168) KIF1A (ENSTMTG00000009870) ENSTMTG00000009720 AGXT (ENSTMTG00000009668) ENSTMTG00000009604 painted turtle MODERN SPECIES 991 ENSCPBG00000004639 POLR1D (ENSCPBG00000004719) VAMP7 (ENSCPBG00000004732) #22 ENSCPBG00000004759 ENSCPBG00000004829 ENSCPBG00000004946 AIRE (ENSCPBG00000004953) ENSCPBG00000004969 SCLY (ENSCPBG00000004976) Testudinidae ANCESTRAL SPECIES 7 ENSGT00530000063484.b.a ENSGT00390000000360 #9 ENSGT00390000006885 #8 ENSGT00390000012647 ENSGT00940000154783 ENSGT00940000160294.g ENSGT00940000160294.h ENSGT00940000158744 ENSGT00510000047092 ENSGT00390000016992 #17 ENSGT00530000063582.a #18 ENSGT00950000183055.a.b #21 ENSGT00940000165106 ENSGT01100000263512.a.a.a.a ENSGT00550000075160 ENSGT00510000047733 #22 ENSGT00390000017860.a.a ENSGT00940000158229 ENSGT00940000157209.ib.a ENSGT00940000161104 ENSGT01030000235137 ENSGT00940000157773 ENSGT00940000158597 ENSGT00940000162100 ENSGT00940000157403 ENSGT00940000156474 ENSGT00940000153241.B ENSGT01050000244976.b.b.b.a.a.b ENSGT00940000162689 ENSGT00940000160730.g ENSGT00460000041648 Goode s thornscrub tortoise MODERN SPECIES 23 BRCC3 (ENSGEVG00005010091) #9 ENSGEVG00005010057 #8 CMC4 (ENSGEVG00005010035) FUNDC2 (ENSGEVG00005010010) ENSGEVG00005009114 ENSGEVG00005008939 MPP1 (ENSGEVG00005008888) DKC1 (ENSGEVG00005008748) ENSGEVG00005008721 #17 ENSGEVG00005008709 TMLHE (ENSGEVG00005008683) #18 SPRY3 (ENSGEVG00005008669) #21 ENSGEVG00005008655 ENSGEVG00005008627 POLR1D (ENSGEVG00005008613) VAMP7 (ENSGEVG00005008594) #22 ENSGEVG00005008577 NSDHL (ENSGEVG00005008557) ENSGEVG00005008542 AIRE (ENSGEVG00005008497) ENSGEVG00005008480 SCLY (ENSGEVG00005008457) KLHL30 (ENSGEVG00005008418) ERFE (ENSGEVG00005008392) ILKAP (ENSGEVG00005008357) KIF1A (ENSGEVG00005005726) AGXT (ENSGEVG00005005094) MAB21L4 (ENSGEVG00005005052) ENSGEVG00005004992 ENSGEVG00005004974 SNED1 (ENSGEVG00005004926) Abingdon island giant tortoise MODERN SPECIES 1816 NAV2 (ENSCABG00000015081) DBX1 (ENSCABG00000015109) HTATIP2 (ENSCABG00000015111) PRMT3 (ENSCABG00000015114) SLC6A5 (ENSCABG00000015405) NELL1 (ENSCABG00000015425) ENSCABG00000000075 POLR1D (ENSCABG00000000127) VAMP7 (ENSCABG00000000260) #22 ENSCABG00000000272 ENSCABG00000000288 Chinese turtle MODERN SPECIES 152 FAAH2 (ENSPSIG00000005227) ENSPSIG00000005176 #8 CMC4 (ENSPSIG00000005138) FUNDC2 (ENSPSIG00000004918) F8 (ENSPSIG00000016737) MPP1 (ENSPSIG00000014074) DKC1 (ENSPSIG00000013765) ENSPSIG00000013696 TMLHE (ENSPSIG00000013371) #18 SPRY3 (ENSPSIG00000000964) #21 BRCC3 (ENSPSIG00000013233) #9 ENSPSIG00000012947 ENSPSIG00000011921 POLR1D (ENSPSIG00000011822) ENSPSIG00000000960 VAMP7 (ENSPSIG00000011813) #22 ENSPSIG00000011350 NSDHL (ENSPSIG00000010828) ENSPSIG00000010782 Archosauria ANCESTRAL SPECIES 15 ENSGT00530000063582.a #18 ENSGT00950000183055.a.b #21 ENSGT00940000165106 ENSGT01100000263512.a.a.a.a ENSGT00550000075160 ENSGT00510000047733 #22 ENSGT00390000017860.a.a ENSGT00530000063872.A ENSGT00940000158229 ENSGT00940000157209.ib.a ENSGT00940000157209.ib.b ENSGT00390000003706.a.b.a ENSGT00390000015364.a.b.a ENSGT00390000015364.a.b.b ENSGT00390000015700.b ENSGT00940000153941.a.b ENSGT00940000166719 ENSGT00940000163673 ENSGT00940000164016 ENSGT00940000161062 ENSGT00510000046908.b Australian saltwater crocodile MODERN SPECIES 43 ENSCPRG00005006996 ENSCPRG00005007011 CNGA2 (ENSCPRG00005007016) ENSCPRG00005007026 PRRG3 (ENSCPRG00005007028) MORC4 (ENSCPRG00005007034) CLDN2 (ENSCPRG00005007070) ENSCPRG00005007078 RBM41 (ENSCPRG00005007080) NUP62 (ENSCPRG00005007086) DNAAF6 (ENSCPRG00005007091) SPRY3 (ENSCPRG00005007095) #21 ENSCPRG00005007102 ENSCPRG00005007110 POLR1D (ENSCPRG00005007123) VAMP7 (ENSCPRG00005007124) #22 ENSCPRG00005007130 ENSCPRG00005007140 NSDHL (ENSCPRG00005007145) ENSCPRG00005007149 ENSCPRG00005007153 ENSCPRG00005007161 ENSCPRG00005007169 GLOD5 (ENSCPRG00005007176) ENSCPRG00005007179 ENSCPRG00005007192 ENSCPRG00005007197 KLF8 (ENSCPRG00005007207) ENSCPRG00005007212 ENSCPRG00005007228 ENSCPRG00005007232 Aves ANCESTRAL SPECIES 23 ENSGT00530000063582.a #18 ENSGT00950000183055.a.b #21 ENSGT00940000165106 ENSGT01100000263512.a.a.a.a ENSGT00550000075160 ENSGT00510000047733 #22 ENSGT00390000017860.a.a ENSGT00530000063872.A ENSGT00940000158229 ENSGT00940000157209.ib.a ENSGT00940000157209.ib.b ENSGT00390000003706.a.b.a ENSGT00390000015364.a.b.a ENSGT00390000015364.a.b.b ENSGT00390000015700.b ENSGT00940000153941.a.b ENSGT00940000166719 ENSGT00940000163673 ENSGT00940000164016 ENSGT00940000161062 ENSGT00950000183031.B African ostrich MODERN SPECIES 113 ENSSCUG00000000470 ENSSCUG00000000473 ENSSCUG00000000480 ENSSCUG00000000490 TMLHE (ENSSCUG00000000492) #18 SPRY3 (ENSSCUG00000000494) #21 ENSSCUG00000000496 ENSSCUG00000000499 POLR1D (ENSSCUG00000000502) VAMP7 (ENSSCUG00000000504) #22 ENSSCUG00000000508 ENSSCUG00000000513 NSDHL (ENSSCUG00000000520) ENSSCUG00000000521 ENSSCUG00000000522 ENSSCUG00000000524 ENSSCUG00000000525 ENSSCUG00000000526 GLOD5 (ENSSCUG00000000528) ENSSCUG00000000531 ENSSCUG00000000547 ENSSCUG00000000556 KLF8 (ENSSCUG00000000559) ENSSCUG00000000563 Neognathae ANCESTRAL SPECIES 22 ENSGT00940000173950 ENSGT00530000063582.a #18 ENSGT00950000183055.a.b #21 ENSGT00940000165106 ENSGT01100000263512.a.a.a.a ENSGT00550000075160 ENSGT00510000047733 #22 ENSGT00390000017860.a.a ENSGT00530000063872.A ENSGT00940000158229 ENSGT00940000157209.ib.a ENSGT00940000157209.ib.b ENSGT00390000003706.a.b.a ENSGT00390000015364.a.b.a ENSGT00390000015364.a.b.b ENSGT00390000015700.b ENSGT00940000153941.a.b ENSGT00940000166719 ENSGT00940000163673 ENSGT00940000164016 ENSGT00940000161062 ENSGT00950000183031.B Galloanserae ANCESTRAL SPECIES 21 ENSGT00940000173950 ENSGT00530000063582.a #18 ENSGT00950000183055.a.b #21 ENSGT00940000165106 ENSGT01100000263512.a.a.a.a ENSGT00550000075160 ENSGT00510000047733 #22 ENSGT00390000017860.a.a ENSGT00530000063872.A ENSGT00940000158229 ENSGT00940000157209.ib.a ENSGT00940000157209.ib.b ENSGT00390000003706.a.b.a ENSGT00390000015364.a.b.a ENSGT00390000015364.a.b.b ENSGT00390000015700.b ENSGT00940000153941.a.b ENSGT00940000166719 ENSGT00940000163673 ENSGT00940000164016 ENSGT00940000161062 ENSGT00950000183031.B Phasianidae ANCESTRAL SPECIES 2 ENSGT00940000162359 ENSGT00940000164188 ENSGT00940000159444 ENSGT00940000161201 ENSGT00940000155374 ENSGT00960000189674 ENSGT00940000160946 ENSGT00940000161952 ENSGT00940000160785 ENSGT00940000173950 ENSGT00530000063582.a #18 ENSGT00950000183055.a.b #21 ENSGT00940000165106 ENSGT01100000263512.a.a.a.a ENSGT00550000075160 ENSGT00510000047733 #22 ENSGT00390000017860.a.a ENSGT00530000063872.A ENSGT00940000158229 ENSGT00940000157209.ib.a ENSGT00940000157209.ib.b ENSGT00390000003706.a.b.a ENSGT00390000015364.a.b.a ENSGT00390000015364.a.b.b ENSGT00390000015700.b ENSGT00940000153941.a.b ENSGT00940000166719 ENSGT00940000163673.l ENSGT00940000164016 ENSGT00940000161062 ENSGT00950000183031.B Japanese quail MODERN SPECIES 22 SOX3 (ENSCJPG00005016837) ENSCJPG00005016866 GABRA3 (ENSCJPG00005016868) GABRE (ENSCJPG00005016871) CNGA2 (ENSCJPG00005016882) ENSCJPG00005016883 PRRG3 (ENSCJPG00005016884) ENSCJPG00005016885 CLDN2 (ENSCJPG00005016886) ENSCJPG00005016888 TMLHE (ENSCJPG00005016890) #18 SPRY3 (ENSCJPG00005016891) #21 ENSCJPG00005016893 EDNRB2 (ENSCJPG00005016895) POLR1D (ENSCJPG00005016896) VAMP7 (ENSCJPG00005016911) #22 ENSCJPG00005016912 NSDHL (ENSCJPG00005016914) ENSCJPG00005016915 ENSCJPG00005016916 ENSCJPG00005016917 ENSCJPG00005016918 ENSCJPG00005016919 ENSCJPG00005016920 GLOD5 (ENSCJPG00005016921) ENSCJPG00005016922 ENSCJPG00005016924 ENSCJPG00005016925 ENSCJPG00005016926 KLF8 (ENSCJPG00005016928) ENSCJPG00005016929 Phasianidae_b ANCESTRAL SPECIES 27 ENSGT00940000173950 ENSGT00530000063582.a #18 ENSGT00950000183055.a.b #21 ENSGT00940000165106 ENSGT01100000263512.a.a.a.a ENSGT00550000075160 ENSGT00510000047733 #22 ENSGT00390000017860.a.a ENSGT00530000063872.A ENSGT00940000158229 ENSGT00940000157209.ib.a ENSGT00940000157209.ib.b ENSGT00390000003706.a.b.a ENSGT00390000015364.a.b.a ENSGT00390000015364.a.b.b ENSGT00390000015700.b ENSGT00940000153941.a.b ENSGT00940000166719 ENSGT00940000163673.l ENSGT00940000164016 ENSGT00940000161062 ENSGT00950000183031.B Chicken MODERN SPECIES 33 SLITRK4 (ENSGALG00010019325) GABRQ (ENSGALG00010015078) GABRA3 (ENSGALG00010015087) GABRE (ENSGALG00010015096) CNGA2 (ENSGALG00010015104) CLDN2 (ENSGALG00010015115) PRRG3 (ENSGALG00010015129) RIPPLY1 (ENSGALG00010015135) ENSGALG00010015149 ENSGALG00010015169 TMLHE (ENSGALG00010015194) #18 SPRY3 (ENSGALG00010011723) #21 POU4F1L (ENSGALG00010011358) EDNRB2 (ENSGALG00010012311) POLR1D (ENSGALG00010012318) VAMP7 (ENSGALG00010012404) #22 ENSGALG00010012456 ENSGALG00010012673 NSDHL (ENSGALG00010012857) CETN1 (ENSGALG00010012469) ENSGALG00010012874 GATD3AL2 (ENSGALG00010011734) ENSGALG00010011648 ENSGALG00010012128 ENSGALG00010012137 GLOD5 (ENSGALG00010012140) ENSGALG00010012145 KCTD12 (ENSGALG00010011333) ENSGALG00010011823 KLF8 (ENSGALG00010011866) RRAGA (ENSGALG00010011898) Turkey MODERN SPECIES 29 ENSMGAG00000004934 ENSMGAG00000005027 ENSMGAG00000015814 ENSMGAG00000018856 ENSMGAG00000005045 GABRA3 (ENSMGAG00000005137) GABRE (ENSMGAG00000005194) CNGA2 (ENSMGAG00000005170) PRRG3 (ENSMGAG00000005238) ENSMGAG00000005246 ENSMGAG00000017674 TMLHE (ENSMGAG00000005254) #18 ENSMGAG00000015816 #21 ENSMGAG00000005304 ENSMGAG00000005322 VAMP7 (ENSMGAG00000005326) #22 ENSMGAG00000005395 ENSMGAG00000018578 ENSMGAG00000005409 ENSMGAG00000005430 ENSMGAG00000019495 ENSMGAG00000005457 ENSMGAG00000005478 ENSMGAG00000005495 ENSMGAG00000005500 ENSMGAG00000005503 ENSMGAG00000005553 ENSMGAG00000005569 ENSMGAG00000020275 ENSMGAG00000005575 ENSMGAG00000005616 Anatidae ANCESTRAL SPECIES 35 ENSGT00940000173950 ENSGT00530000063582.a #18 ENSGT00950000183055.a.b #21 ENSGT00940000165106 ENSGT01100000263512.a.a.a.a ENSGT00550000075160 ENSGT00510000047733 #22 ENSGT00390000017860.a.a ENSGT00530000063872.A ENSGT00940000158229 ENSGT00940000157209.ib.a ENSGT00940000157209.ib.b ENSGT00390000003706.a.b.a ENSGT00390000015364.a.b.a ENSGT00390000015364.a.b.b ENSGT00390000015700.b ENSGT00940000153941.a.b ENSGT00940000166719 ENSGT00940000163673 ENSGT00940000164016 ENSGT00950000183031.B ENSGT00390000008508 Duck MODERN SPECIES 1 ENSAPLG00000000577 MTM1 (ENSAPLG00000002352) MAMLD1 (ENSAPLG00000003254) ENSAPLG00000003441 TMEM185A (ENSAPLG00000003446) IDS (ENSAPLG00000003521) AFF2 (ENSAPLG00000003660) FMR1 (ENSAPLG00000003811) SLITRK2 (ENSAPLG00000001736) ENSAPLG00000016900 TMLHE (ENSAPLG00000012485) #18 SPRY3 (ENSAPLG00000012493) #21 ENSAPLG00000020012 ENSAPLG00000012679 POLR1D (ENSAPLG00000012757) VAMP7 (ENSAPLG00000012771) #22 ENSAPLG00000012884 ENSAPLG00000012906 NSDHL (ENSAPLG00000013097) ENSAPLG00000023224 ENSAPLG00000013441 ENSAPLG00000013521 ENSAPLG00000013596 ENSAPLG00000021197 GLOD5 (ENSAPLG00000020648) ENSAPLG00000013758 ENSAPLG00000001241 ENSAPLG00000019319 C8orf48 (ENSAPLG00000020502) MTMR8 (ENSAPLG00000003847) ASB12 (ENSAPLG00000025193) Pink-footed goose MODERN SPECIES 96 TMLHE (ENSABRG00000019206) #18 SPRY3 (ENSABRG00000019199) #21 ENSABRG00000019190 ENSABRG00000019183 POLR1D (ENSABRG00000019178) VAMP7 (ENSABRG00000019175) #22 ENSABRG00000019173 NSDHL (ENSABRG00000019160) ENSABRG00000019155 ENSABRG00000019147 ENSABRG00000019144 ENSABRG00000019142 ENSABRG00000019141 ENSABRG00000019139 GLOD5 (ENSABRG00000019136) ENSABRG00000019128 ENSABRG00000019124 ENSABRG00000019119 ENSABRG00000019112 ENSABRG00000019105 ENSABRG00000019079 Neognathae_b ANCESTRAL SPECIES ENSGT00550000075136 ENSGT00940000160863 ENSGT00890000139472 ENSGT00940000159471 ENSGT01060000248564.b.b ENSGT00390000006788.a.a ENSGT00940000153904.b ENSGT00940000153763.a ENSGT01040000244068 ENSGT00940000173950 ENSGT00530000063582.a #18 ENSGT00950000183055.a.b #21 ENSGT00940000165106 ENSGT01100000263512.a.a.a.a ENSGT00550000075160 ENSGT00510000047733 #22 ENSGT00390000017860.a.a ENSGT00530000063872.A ENSGT00940000158229 ENSGT00940000157209.ib.a ENSGT00940000157209.ib.b ENSGT00390000003706.a.b.a ENSGT00390000015364.a.b.a ENSGT00390000015364.a.b.b ENSGT00390000015700.b ENSGT00940000153941.a.b ENSGT00940000166719 ENSGT00940000163673 ENSGT00940000164016 ENSGT00940000161062 ENSGT00950000183031.B Passeriformes ANCESTRAL SPECIES 30 ENSGT00550000075136 ENSGT00940000160863 ENSGT00890000139472 ENSGT00940000159471 ENSGT01060000248564.b.b ENSGT00390000006788.a.a ENSGT00940000153904.b ENSGT00940000153763.a ENSGT01040000244068 ENSGT00940000173950 ENSGT00530000063582.a #18 ENSGT00950000183055.a.b #21 ENSGT00940000165106 ENSGT01100000263512.a.a.a.a ENSGT00550000075160 ENSGT00510000047733 #22 ENSGT00390000017860.a.a ENSGT00530000063872.A ENSGT00940000158229 ENSGT00940000157209.ib.a ENSGT00390000003706.a.b.a ENSGT00390000015364.a.b.a ENSGT00390000015364.a.b.b ENSGT00390000015700.b ENSGT00940000153941.a.b ENSGT00940000166719 ENSGT00940000163673 ENSGT00940000164016 ENSGT00940000161062 ENSGT00950000183031.B ENSGT00940000166620 Passeriformes_d ANCESTRAL SPECIES 31 ENSGT00940000156455 ENSGT00550000075136 ENSGT00940000160863 ENSGT00890000139472 ENSGT00940000159471 ENSGT01060000248564.b.b ENSGT00390000006788.a.a ENSGT00940000153904.b ENSGT00940000153763.a ENSGT01040000244068 ENSGT00530000063582.a #18 ENSGT00950000183055.a.b #21 ENSGT00940000165106 ENSGT01100000263512.a.a.a.a ENSGT00550000075160 ENSGT00510000047733 #22 ENSGT00390000017860.a.a ENSGT00530000063872.A ENSGT00940000158229 ENSGT00940000157209.ib.a ENSGT00390000003706.a.b.a ENSGT00390000015364.a.b.a ENSGT00390000015364.a.b.b ENSGT00390000015700.b ENSGT00940000153941.a.b ENSGT00940000166719 ENSGT00940000163673 ENSGT00940000164016 ENSGT00940000161062 ENSGT00950000183031.B ENSGT00940000166620 Flycatcher MODERN SPECIES 23 ENSFALG00000011551 ENSFALG00000011540 ENSFALG00000011529 ENSFALG00000023854 ENSFALG00000025048 ENSFALG00000011510 ENSFALG00000011502 ENSFALG00000027251 ENSFALG00000025631 ENSFALG00000011498 TMLHE (ENSFALG00000011491) #18 ENSFALG00000023744 SPRY3 (ENSFALG00000028293) #21 ENSFALG00000011470 ENSFALG00000011463 VAMP7 (ENSFALG00000011445) #22 ENSFALG00000011433 ENSFALG00000024895 ENSFALG00000011386 ENSFALG00000023638 ENSFALG00000011351 ENSFALG00000011343 ENSFALG00000011333 ENSFALG00000024517 ENSFALG00000011323 ENSFALG00000011318 ENSFALG00000026980 ENSFALG00000011293 ENSFALG00000014669 ENSFALG00000023898 KLF8 (ENSFALG00000023552) Passeriformes_g ANCESTRAL SPECIES 23 ENSGT00940000156455 ENSGT00550000075136 ENSGT00940000160863 ENSGT00890000139472 ENSGT00940000159471 ENSGT01060000248564.b.b ENSGT00390000006788.a.a ENSGT00940000153904.b ENSGT00940000153763.a ENSGT01040000244068 ENSGT00530000063582.a #18 ENSGT00950000183055.a.b #21 ENSGT00940000165106 ENSGT01100000263512.a.a.a.a ENSGT00550000075160 ENSGT00510000047733 #22 ENSGT00390000017860.a.a ENSGT00530000063872.A ENSGT00940000158229 ENSGT00940000157209.ib.a ENSGT00390000003706.a.b.a ENSGT00390000015364.a.b.a ENSGT00390000015364.a.b.b ENSGT00390000015700.b ENSGT00940000153941.a.b ENSGT00940000166719 ENSGT00940000163673 ENSGT00940000164016 ENSGT00940000161062 ENSGT00950000183031.B ENSGT00940000166620 Passeroidea ANCESTRAL SPECIES 25 ENSGT00940000156455 ENSGT00550000075136 ENSGT00940000160863 ENSGT00890000139472 ENSGT00940000159471 ENSGT01060000248564.b.b ENSGT00390000006788.a.a ENSGT00940000153904.b ENSGT00940000153763.a ENSGT01070000253816.a.a.a ENSGT00530000063582.a #18 ENSGT00950000183055.a.b #21 ENSGT00940000165106 ENSGT01100000263512.a.a.a.a ENSGT00550000075160 ENSGT00510000047733 #22 ENSGT00390000017860.a.a ENSGT00530000063872.A ENSGT00940000158229 ENSGT00940000157209.ib.a ENSGT00390000003706.a.b.a ENSGT00390000015364.a.b.a ENSGT00390000015364.a.b.b ENSGT00390000015700.b ENSGT00940000153941.a.b ENSGT00940000166719 ENSGT00940000163673 ENSGT00940000164016 ENSGT00940000161062 ENSGT00950000183031.B ENSGT00940000166620 Zebra finch DUPLICATION Zebra finch MODERN SPECIES 26 RAB33A (ENSTGUG00000005228) ENSTGUG00000005239 SLC25A14 (ENSTGUG00000005241) GPR119 (ENSTGUG00000018290) ENOX2 (ENSTGUG00000005267) ENSTGUG00000005313 ENSTGUG00000004980 ENSTGUG00000020814 ENSTGUG00000021485 ENSTGUG00000005395 ENSTGUG00000028678 #18 ENSTGUG00000018792 #21 ENSTGUG00000023728 ENSTGUG00000005425 ENSTGUG00000005450 ENSTGUG00000024179 #22 ENSTGUG00000005475 ENSTGUG00000005324 ENSTGUG00000027391 ENSTGUG00000022125 ENSTGUG00000005397 #18 ENSTGUG00000025775 ENSTGUG00000022056 ENSTGUG00000028795 ENSTGUG00000005462 #22 ENSTGUG00000027021 ENSTGUG00000023341 ENSTGUG00000023560 NSDHL (ENSTGUG00000005479) CETN2 (ENSTGUG00000005489) ENSTGUG00000005498 Zebra finch MODERN SPECIES 26 ENSTGUG00000005395 ENSTGUG00000028678 #18 ENSTGUG00000018792 #21 ENSTGUG00000023728 ENSTGUG00000005425 ENSTGUG00000005450 ENSTGUG00000024179 #22 ENSTGUG00000005475 ENSTGUG00000005324 ENSTGUG00000027391 ENSTGUG00000022125 ENSTGUG00000005397 #18 ENSTGUG00000025775 ENSTGUG00000022056 ENSTGUG00000028795 ENSTGUG00000005462 #22 ENSTGUG00000027021 ENSTGUG00000023341 ENSTGUG00000023560 NSDHL (ENSTGUG00000005479) CETN2 (ENSTGUG00000005489) ENSTGUG00000005498 ENSTGUG00000005499 ENSTGUG00000027705 ENSTGUG00000005503 GLOD5 (ENSTGUG00000005508) ENSTGUG00000005511 ENSTGUG00000005525 ENSTGUG00000005530 KLF8 (ENSTGUG00000021187) ENSTGUG00000005543 Common canary MODERN SPECIES 13 RAB33A (ENSSCAG00000015985) RBMX2 (ENSSCAG00000015986) SLC25A14 (ENSSCAG00000015989) GPR119 (ENSSCAG00000015993) ENOX2 (ENSSCAG00000015997) ENSSCAG00000016003 ENSSCAG00000016007 CLCN5 (ENSSCAG00000016022) ENSSCAG00000016035 ENSSCAG00000016042 TMLHE (ENSSCAG00000016044) #18 SPRY3 (ENSSCAG00000016048) #21 ENSSCAG00000016053 ENSSCAG00000016058 POLR1D (ENSSCAG00000016071) VAMP7 (ENSSCAG00000016074) #22 ENSSCAG00000016077 ENSSCAG00000016092 NSDHL (ENSSCAG00000016117) CETN1 (ENSSCAG00000016121) ENSSCAG00000016123 ENSSCAG00000016128 ENSSCAG00000016133 GLOD5 (ENSSCAG00000016135) ENSSCAG00000016139 ENSSCAG00000016148 ENSSCAG00000016151 ENSSCAG00000016154 ENSSCAG00000016159 ENSSCAG00000016164 MTMR8 (ENSSCAG00000016167) Medium ground finch MODERN SPECIES 207 ZDHHC9 (ENSGFOG00000009657) ENSGFOG00000009242 BCORL1 (ENSGFOG00000009217) AIFM1 (ENSGFOG00000007687) RAB33A (ENSGFOG00000007600) RBMX2 (ENSGFOG00000007595) SLC25A14 (ENSGFOG00000007592) GPR119 (ENSGFOG00000009498) ENOX2 (ENSGFOG00000009485) ENSGFOG00000009473 CLCN5 (ENSGFOG00000009459) ENSGFOG00000009449 TMLHE (ENSGFOG00000009436) #18 ENSGFOG00000009427 POLR1D (ENSGFOG00000009425) VAMP7 (ENSGFOG00000009418) #22 ENSGFOG00000009410 NSDHL (ENSGFOG00000009399) CETN1 (ENSGFOG00000009390) ENSGFOG00000009380 ENSGFOG00000009363 ENSGFOG00000009351 GLOD5 (ENSGFOG00000009263) ENSGFOG00000009252 ENSGFOG00000009229 Great tit MODERN SPECIES 24 CDX4 (ENSPMJG00000012219) ENSPMJG00000012220 ENSPMJG00000012221 ARHGEF9 (ENSPMJG00000012224) AMER1 (ENSPMJG00000012226) ASB12 (ENSPMJG00000012227) MTMR8 (ENSPMJG00000012233) ENSPMJG00000012265 ENSPMJG00000012266 ENSPMJG00000012268 KLF8 (ENSPMJG00000012269) ENSPMJG00000012271 ENSPMJG00000012273 ENSPMJG00000012274 POLR1D (ENSPMJG00000012275) VAMP7 (ENSPMJG00000012276) #22 ENSPMJG00000012277 ENSPMJG00000012278 NSDHL (ENSPMJG00000012281) CETN1 (ENSPMJG00000012282) ENSPMJG00000012283 ENSPMJG00000012284 ENSPMJG00000012285 ENSPMJG00000012287 GLOD5 (ENSPMJG00000012288) ENSPMJG00000012294 ENSPMJG00000012295 ENSPMJG00000012296 ENSPMJG00000012297 HDAC8 (ENSPMJG00000012298) PHKA1 (ENSPMJG00000012303) Neognathae_c ANCESTRAL SPECIES 4 ENSGT00550000075136 ENSGT00940000160863 ENSGT00890000139472 ENSGT00940000159471 ENSGT01060000248564.b.b ENSGT00390000006788.a.a ENSGT00940000153904.b ENSGT00940000153763.a ENSGT01070000253816.a.a.a ENSGT00940000173950 ENSGT00530000063582.a #18 ENSGT00950000183055.a.b #21 ENSGT00940000165106 ENSGT01100000263512.a.a.a.a ENSGT00550000075160 ENSGT00510000047733 #22 ENSGT00390000017860.a.a ENSGT00940000158229 ENSGT00940000157209.ib.a ENSGT00940000157209.ib.b ENSGT00390000003706.a.b.a ENSGT00390000015364.a.b.a ENSGT00390000015700.b ENSGT00940000153941.a.b ENSGT00940000166719 ENSGT00940000163673 ENSGT00940000164016 ENSGT00940000161062 ENSGT00950000183031.B ENSGT00940000166620 ENSGT00940000162717 Golden eagle MODERN SPECIES 13 RBMX2 (ENSACCG00020007743) SLC25A14 (ENSACCG00020007727) GPR119 (ENSACCG00020007718) ENOX2 (ENSACCG00020007695) ENSACCG00020007661 ENSACCG00020007639 CLCN5 (ENSACCG00020007611) ENSACCG00020007589 ENSACCG00020007570 ENSACCG00020007555 TMLHE (ENSACCG00020007536) #18 SPRY3 (ENSACCG00020007532) #21 ENSACCG00020007522 ENSACCG00020007508 POLR1D (ENSACCG00020007496) VAMP7 (ENSACCG00020007483) #22 ENSACCG00020007462 NSDHL (ENSACCG00020007445) ENSACCG00020007427 ENSACCG00020007416 ENSACCG00020007403 ENSACCG00020007384 ENSACCG00020007368 ENSACCG00020007333 KLF8 (ENSACCG00020007297) ENSACCG00020007279 ENSACCG00020007253 ENSACCG00020007240 MTMR8 (ENSACCG00020007219) ASB12 (ENSACCG00020007207) AMER1 (ENSACCG00020007175) Kakapo MODERN SPECIES 1 AIFM1 (ENSSHBG00005015724) MARS2 (ENSSHBG00005015746) RAB33A (ENSSHBG00005015752) RBMX2 (ENSSHBG00005015755) SLC25A14 (ENSSHBG00005015761) ENOX2 (ENSSHBG00005015764) ENSSHBG00005015772 ENSSHBG00005015782 CLCN5 (ENSSHBG00005015794) ENSSHBG00005015799 TMLHE (ENSSHBG00005000612) #18 SPRY3 (ENSSHBG00005000614) #21 ENSSHBG00005000616 ENSSHBG00005000617 ENSSHBG00005000618 VAMP7 (ENSSHBG00005006450) #22 ENSSHBG00005006484 NSDHL (ENSSHBG00005006505) CETN1 (ENSSHBG00005006526) ENSSHBG00005006536 ENSSHBG00005006551 ENSSHBG00005006567 GLOD5 (ENSSHBG00005006584) ENSSHBG00005006622 ENSSHBG00005006804 ENSSHBG00005006819 KLF8 (ENSSHBG00005006843) ENSSHBG00005006862 ENSSHBG00005006890 ENSSHBG00005006915 MTMR8 (ENSSHBG00005006939) Anura ANCESTRAL SPECIES 19 ENSGT00480000042679.a ENSGT00940000159162 ENSGT00940000157822 ENSGT00940000153737.a ENSGT00500000044890.b ENSGT00940000159092 ENSGT00940000159149 ENSGT00940000159060 ENSGT01100000263519.A.b.b.b.a.a ENSGT01060000248589.C ENSGT00530000063582.a #18 ENSGT00950000183055.a.b #21 ENSGT00940000165106 ENSGT01100000263512.a.a.a.a ENSGT00550000075160 ENSGT00510000047733 #22 ENSGT00390000017860.a.a ENSGT00530000063872.A ENSGT00940000158229 ENSGT00940000157209 ENSGT01100000263536.A.a.a ENSGT01040000240444.A.a.a.a.b ENSGT01100000263536.B.c.b ENSGT00940000163592 ENSGT00940000155097 ENSGT01050000244937.a.b.a ENSGT00940000159971 ENSGT00940000160039 ENSGT00950000183097.a.a.a ENSGT00940000167413 ENSGT01050000244888.b.a.c.a.s Frog MODERN SPECIES 8 chmp1b (ENSXETG00000022122) tbx22 (ENSXETG00000006730) itm2a (ENSXETG00000027280) gpr174 (ENSXETG00000006729) srpx2 (ENSXETG00000006728) sytl4 (ENSXETG00000006723) znf282 (ENSXETG00000035960) ENSXETG00000044600 ENSXETG00000047718 tmlhe (ENSXETG00000018382) #18 ENSXETG00000018385 spry3 (ENSXETG00000045132) #21 pou4f4 (ENSXETG00000018386) ednrb2 (ENSXETG00000018387) polr1d.2 (ENSXETG00000039615) vamp7 (ENSXETG00000018389) #22 slain2l (ENSXETG00000049338) slain2l (ENSXETG00000024794) ENSXETG00000018441 ENSXETG00000046605 cetn1 (ENSXETG00000018443) lpar4 (ENSXETG00000018445) p2ry10 (ENSXETG00000024793) cysltr1 (ENSXETG00000010129) fndc3a (ENSXETG00000010132) taf9b (ENSXETG00000010138) ENSXETG00000045452 htr2c (ENSXETG00000024787) il13ra2 (ENSXETG00000024786) ENSXETG00000033596 lrch2 (ENSXETG00000010141) Leishan spiny toad MODERN SPECIES 12 SRPX2 (ENSLLEG00000019472) SYTL4 (ENSLLEG00000019740) ENSLLEG00000020223 ENSLLEG00000020338 ENSLLEG00000020607 ENSLLEG00000020824 ENSLLEG00000020895 ENSLLEG00000021067 ENSLLEG00000021097 TMLHE (ENSLLEG00000021130) #18 SPRY3 (ENSLLEG00000021216) #21 ENSLLEG00000021239 ENSLLEG00000021277 ENSLLEG00000021305 POLR1D (ENSLLEG00000021388) VAMP7 (ENSLLEG00000021449) #22 ENSLLEG00000021576 ENSLLEG00000021729 NSDHL (ENSLLEG00000021805) CETN1 (ENSLLEG00000021960) ENSLLEG00000022167 ENSLLEG00000022229 P2RY10 (ENSLLEG00000022270) LPAR4 (ENSLLEG00000022296) CYSLTR1 (ENSLLEG00000022331) ENSLLEG00000008117 ENSLLEG00000008292 TAF9 (ENSLLEG00000008327) ENSLLEG00000008602 ENSLLEG00000008615 ENSLLEG00000008638 Coelacanth MODERN SPECIES 442 CLIC2 (ENSLACG00000015629) #15 FAAH2 (ENSLACG00000015066) ENSLACG00000014950 BRCC3 (ENSLACG00000014746) #9 FUNDC2 (ENSLACG00000014683) CMC4 (ENSLACG00000014643) ENSLACG00000014186 DKC1 (ENSLACG00000014025) MPP1 (ENSLACG00000013850) TMLHE (ENSLACG00000013321) #18 SPRY3 (ENSLACG00000012540) #21 pou4f4 (ENSLACG00000010858) ENSLACG00000010536 ENSLACG00000007171 POLR1D (ENSLACG00000006810) VAMP7 (ENSLACG00000006257) #22 zgc:66447 (ENSLACG00000005446) ENSLACG00000002295 NSDHL (ENSLACG00000001805) Actinopterygii ANCESTRAL SPECIES 83 ENSGT01050000244948.d ENSGT00940000162488 ENSGT00950000182832.D.b ENSGT00940000161206 ENSGT00950000183115.b.b ENSGT01100000263536.A.a.b ENSGT01100000263536.A.a.a ENSGT01040000240444.A.a.a.a.b ENSGT00990000203619.B ENSGT01100000263536.B.c.b ENSGT00940000163592 ENSGT01100000263484.C.a ENSGT00950000183031.B ENSGT01100000263512.a.a.a.a ENSGT00550000075160 ENSGT00510000047733 #22 ENSGT00950000182915.a.b ENSGT00940000161737 ENSGT00390000015219 ENSGT00940000155374 ENSGT00730000112379 ENSGT00940000160946 ENSGT00940000161952 ENSGT00940000160785 ENSGT00940000161221 ENSGT00940000166590 ENSGT00530000063786.b ENSGT00940000161062 ENSGT00940000164016 ENSGT00940000165106 ENSGT00950000183055.a.b #21 Neopterygii ANCESTRAL SPECIES 84 ENSGT00940000162488 ENSGT00950000182832.D.b ENSGT00940000161206 ENSGT00950000183115.b.b ENSGT01100000263536.A.a.b ENSGT01100000263536.A.a.a ENSGT01040000240444.A.a.a.a.b ENSGT01030000235435 ENSGT01100000263536.B.c.b ENSGT00940000163592 ENSGT00940000153997.b.a.b ENSGT01100000263484.C.a ENSGT00950000183031.B ENSGT01100000263512.a.a.a.a ENSGT00550000075160 ENSGT00510000047733 #22 ENSGT00950000182915.a.b ENSGT00940000161737 ENSGT00390000015219 ENSGT00940000155374 ENSGT00730000112379 ENSGT00940000160946 ENSGT00940000161952 ENSGT00940000160785 ENSGT00940000166590 ENSGT00530000063786.b ENSGT00940000161062 ENSGT00940000164016 ENSGT00940000165106 ENSGT00950000183055.a.b #21 ENSGT00390000000141 Osteoglossocephalai ANCESTRAL SPECIES 71 ENSGT00950000182802.D ENSGT00950000183107.a.b.b ENSGT01050000244948.d ENSGT00940000162488 ENSGT00950000182832.D.b ENSGT00940000161206 ENSGT00950000183115.b.b ENSGT01100000263536.A.a.b ENSGT01100000263536.A.a.a ENSGT01040000240444.A.a.a.a.b ENSGT01030000235435 ENSGT01100000263536.B.c.b ENSGT00950000183031.B ENSGT01100000263512.a.a.a.a ENSGT00550000075160 ENSGT00510000047733 #22 ENSGT00950000182915.a.b ENSGT00940000161737 ENSGT00940000155374.g.b Osteoglossiformes DUPLICATION Osteoglossiformes ANCESTRAL SPECIES 22 ENSGT00950000183031.B ENSGT01100000263512.a.a.a.a.c ENSGT00550000075160 ENSGT00510000047733.s #22 ENSGT00950000182915.a.b ENSGT00940000161737 ENSGT00940000155374.g.b ENSGT00950000183097.a.a.a.e.b ENSGT00390000012030.b.a.p ENSGT00940000155902.c ENSGT00940000160087 ENSGT00940000158214 ENSGT01020000230412.D.a.b ENSGT00940000156281 ENSGT00940000159746.c ENSGT00940000155753.w ENSGT00940000153941.a.b ENSGT00940000168152 ENSGT00390000015700.b P. kingsleyae MODERN SPECIES 155 TENT5D (ENSPKIG00000021664) ENSPKIG00000021672 TBX22 (ENSPKIG00000021685) ITM2A (ENSPKIG00000021697) ENSPKIG00000021709 p2ry10 (ENSPKIG00000021721) LPAR4 (ENSPKIG00000021733) ENSPKIG00000021741 cysltr1 (ENSPKIG00000021751) ENSPKIG00000021774 MLNR (ENSPKIG00000021830) rraga (ENSPKIG00000021851) ENSPKIG00000021873 polr1d (ENSPKIG00000021891) sybl1 (ENSPKIG00000021911) #22 ENSPKIG00000021942 nup62l (ENSPKIG00000021980) cnga2a (ENSPKIG00000022010) pls3 (ENSPKIG00000022032) magt1 (ENSPKIG00000022098) atrx (ENSPKIG00000022151) fgf16 (ENSPKIG00000022253) zdhhc15b (ENSPKIG00000022279) uprt (ENSPKIG00000022317) abcb7 (ENSPKIG00000022336) NEXMIF (ENSPKIG00000022363) RLIM (ENSPKIG00000022378) ENSPKIG00000022404 irg1l (ENSPKIG00000022434) ENSPKIG00000022450 Asian bonytongue MODERN SPECIES 4 TENT5D (ENSSFOG00015009416) CHMP1B (ENSSFOG00015011796) TBX22 (ENSSFOG00015011756) ITM2A (ENSSFOG00015011735) ENSSFOG00015011728 p2ry10 (ENSSFOG00015031809) LPAR4 (ENSSFOG00015011713) ENSSFOG00015011703 ENSSFOG00015025572 cysltr1 (ENSSFOG00015011692) ENSSFOG00015011676 ENSSFOG00015011499 rraga (ENSSFOG00015011428) ENSSFOG00015011397 polr1d (ENSSFOG00015011375) sybl1 (ENSSFOG00015011335) #22 ENSSFOG00015011310 ENSSFOG00015011299 cnga2a (ENSSFOG00015011265) PLS3 (ENSSFOG00015011231) magt1 (ENSSFOG00015011215) atrx (ENSSFOG00015011142) ENSSFOG00015011208 fgf16 (ENSSFOG00015011113) zdhhc15b (ENSSFOG00015011078) UPRT (ENSSFOG00015011051) abcb7 (ENSSFOG00015010993) zdhhc15b (ENSSFOG00015024846) UPRT (ENSSFOG00015026891) abcb7 (ENSSFOG00015030088) NEXMIF (ENSSFOG00015010970) Osteoglossiformes ANCESTRAL SPECIES 385 ENSGT00940000159242.k ENSGT00940000161429.b ENSGT00950000183107.a.b.b.c ENSGT01050000244948.d ENSGT00950000183107.a.b.b.d ENSGT00940000162488 ENSGT00950000182832.D.b ENSGT00950000183115.b.b.h ENSGT01100000263536.A.a.b.b ENSGT01100000263536.B.c.b.j ENSGT01100000263512.a.a.a.a.d ENSGT00510000047733.t #22 Asian bonytongue MODERN SPECIES 5 TENM1 (ENSSFOG00015009122) SH2D1A (ENSSFOG00015009183) agtr2 (ENSSFOG00015009207) apool (ENSSFOG00015029030) ENSSFOG00015009216 rps6kal (ENSSFOG00015009328) POU3F4 (ENSSFOG00015024608) BRWD3 (ENSSFOG00015009384) ENSSFOG00015030281 TENT5D (ENSSFOG00015032738) chmp1b (ENSSFOG00015028441) ENSSFOG00015009454 ENSSFOG00015009463 CYSLTR1 (ENSSFOG00015009469) ENSSFOG00015009476 sybl1 (ENSSFOG00015029613) #22 mpp1 (ENSSFOG00015009567) dkc1 (ENSSFOG00015009585) TMLHE (ENSSFOG00015009685) #18 taf9 (ENSSFOG00015009760) siah2l (ENSSFOG00015027597) ENSSFOG00015009797 GPR119 (ENSSFOG00015009808) slc25a14 (ENSSFOG00015031016) ENSSFOG00015009846 SPRY3 (ENSSFOG00015009856) #21 pou4f4 (ENSSFOG00015032579) klf5l (ENSSFOG00015009915) klf8 (ENSSFOG00015032620) rbm41 (ENSSFOG00015009956) cldn2 (ENSSFOG00015009964) Clupeocephala ANCESTRAL SPECIES 86 ENSGT00940000156017 ENSGT00950000182802.D ENSGT00950000183107.a.b.b ENSGT00940000162488.b.a ENSGT00950000182832.D.b ENSGT00940000161206 ENSGT00950000183115.b.b ENSGT01100000263536.A.a.b ENSGT01100000263536.A.a.a ENSGT01040000240444.A.a.a.a.b ENSGT01030000235435 ENSGT01100000263536.B.c.b ENSGT00950000183031.B ENSGT01100000263512.a.a.a.a ENSGT00550000075160 ENSGT00510000047733 #22 ENSGT00950000182915.a.b ENSGT00940000161737 ENSGT00940000155374.g.b Otomorpha ANCESTRAL SPECIES 85 ENSGT00940000156017 ENSGT00950000182802.D ENSGT00940000162488.a ENSGT00950000182832.D.b ENSGT00940000161206 ENSGT00950000183115.b.b ENSGT01100000263536.A.a.b ENSGT01100000263536.A.a.a ENSGT01040000240444.A.a.a.a.b ENSGT01030000235435 ENSGT01100000263536.B.c.b ENSGT00940000163592 ENSGT00950000183031.B ENSGT01100000263512.a.a.a.a ENSGT00550000075160 ENSGT00510000047733 #22 ENSGT00950000182915.a.b Clupeiformes ANCESTRAL SPECIES 11 ENSGT00940000156017 ENSGT00950000182802.D ENSGT00940000162488.a ENSGT00950000182832.D.b ENSGT00940000161206 ENSGT00950000183115.b.b ENSGT01100000263536.A.a.b ENSGT01100000263536.A.a.a ENSGT01040000240444.A.a.a.a.b ENSGT01030000235435 ENSGT01100000263536.B.c.b ENSGT00940000163592 ENSGT00950000183031.B ENSGT01100000263512.a.a.a.a ENSGT00550000075160 ENSGT00510000047733 #22 ENSGT00950000182915.a.b ENSGT00390000012030.b.a ENSGT00950000183097.a.a.a.f ENSGT00940000155374.g.b ENSGT00940000161737 ENSGT00940000155902.c ENSGT00940000160087 ENSGT00940000158214.c ENSGT01020000230412.D.a.a.a ENSGT00940000156281 ENSGT00940000159746 ENSGT00940000155753 ENSGT00940000153941.a.b ENSGT00390000015700.b ENSGT00390000015364.a.b.b Denticle herring MODERN SPECIES 9 sh3bgrl (ENSDCDG00000022029) hmgn6 (ENSDCDG00000022026) TENT5D (ENSDCDG00000022024) chmp1b (ENSDCDG00000021747) TBX22 (ENSDCDG00000021734) ITM2A (ENSDCDG00000021727) ENSDCDG00000021725 p2ry10 (ENSDCDG00000021723) LPAR4 (ENSDCDG00000021720) ENSDCDG00000021717 cysltr1 (ENSDCDG00000021715) ENSDCDG00000021712 rraga (ENSDCDG00000021708) ENSDCDG00000021704 polr1d (ENSDCDG00000021702) sybl1 (ENSDCDG00000021700) #22 ENSDCDG00000021694 magt1 (ENSDCDG00000021599) pls3 (ENSDCDG00000016611) cnga2a (ENSDCDG00000016447) nup62l (ENSDCDG00000016444) atrx (ENSDCDG00000012013) fgf16 (ENSDCDG00000011803) zdhhc15b (ENSDCDG00000011776) UPRT (ENSDCDG00000011762) abcb7 (ENSDCDG00000009172) NEXMIF (ENSDCDG00000009034) RLIM (ENSDCDG00000009029) glod5 (ENSDCDG00000009021) irg1l (ENSDCDG00000009009) ENSDCDG00000008996 Atlantic herring MODERN SPECIES 12 LRRTM2 (ENSCHAG00000013524) ctnna1 (ENSCHAG00000012398) ENSCHAG00000012342 tspan17 (ENSCHAG00000012184) ENSCHAG00000012160 dctn4 (ENSCHAG00000012133) gpx3 (ENSCHAG00000011962) tnip1 (ENSCHAG00000011940) anxa6 (ENSCHAG00000010813) ENSCHAG00000010680 ENSCHAG00000010675 N4BP3 (ENSCHAG00000010669) rmnd5b (ENSCHAG00000010409) aldob (ENSCHAG00000010309) ENSCHAG00000010270 sybl1 (ENSCHAG00000010223) #22 ENSCHAG00000010210 magt1 (ENSCHAG00000009608) pls3 (ENSCHAG00000006028) cnga2a (ENSCHAG00000005860) nup62l (ENSCHAG00000005819) atrx (ENSCHAG00000001593) fgf16 (ENSCHAG00000001334) zdhhc15b (ENSCHAG00000001016) UPRT (ENSCHAG00000000613) abcb7 (ENSCHAG00000023875) NEXMIF (ENSCHAG00000023859) RLIM (ENSCHAG00000023856) glod5 (ENSCHAG00000023854) irg1l (ENSCHAG00000023849) ENSCHAG00000023845 Otophysi ANCESTRAL SPECIES 10 ENSGT01100000263536.A.a.b ENSGT01100000263536.A.a.a ENSGT01040000240444.A.a.a.a.b ENSGT01030000235435 ENSGT01100000263536.B.c.b ENSGT00940000163592 ENSGT00950000183031.B ENSGT01100000263512.a.a.a.a ENSGT00550000075160 ENSGT00510000047733 #22 ENSGT00950000182915.a.b ENSGT00940000163331.a.b ENSGT00940000163673 ENSGT00950000182803.B.d.a.n ENSGT00940000161713 ENSGT00940000176232 ENSGT00390000017860.a.a ENSGT00940000159611 ENSGT00950000183035.a.a ENSGT00510000046908.b ENSGT00390000001775.A ENSGT00390000003706.a.b.a ENSGT00390000015364.a.b.a ENSGT00390000015364.a.b.b ENSGT00390000015700.b Characiphysae ANCESTRAL SPECIES 21 ENSGT00950000182802.D.db.a ENSGT00940000162488.a ENSGT00940000166733 ENSGT00940000161206 ENSGT00950000183115.b.b ENSGT01030000234518.D ENSGT01100000263536.A.a.b ENSGT01100000263536.A.a.a ENSGT01040000240444.A.a.a.a.b ENSGT01030000235435 ENSGT01100000263536.B.c.b ENSGT00940000163592 ENSGT00950000183031.B ENSGT01100000263512.a.a.a.a ENSGT00550000075160 ENSGT00510000047733 #22 ENSGT00950000182915.a.b ENSGT00940000163331.a.b ENSGT00940000163673 ENSGT00950000182803.B.d.a.n ENSGT00940000161713 ENSGT00940000176232 ENSGT00390000017860.a.a ENSGT00940000159611 ENSGT00950000183035.a.a ENSGT00510000046908.b ENSGT00390000001775.A ENSGT00390000003706.a.b.a ENSGT00390000015364.a.b.a ENSGT00390000015364.a.b.b ENSGT00390000015700.b Characiphysae_b ANCESTRAL SPECIES 16 ENSGT00950000182802.D.db.a ENSGT00940000162488.a ENSGT00950000182832.D.b ENSGT00940000161206 ENSGT00950000183115.b.b ENSGT01100000263536.A.a.b ENSGT01100000263536.A.a.a ENSGT01040000240444.A.a.a.a.b ENSGT01030000235435 ENSGT01100000263536.B.c.b ENSGT00990000203619.B.b ENSGT00940000163592 ENSGT00950000183031.B ENSGT01100000263512.a.a.a.a ENSGT00550000075160 ENSGT00510000047733 #22 ENSGT00950000182915.a.b ENSGT00940000163331.a.b ENSGT00940000163673 ENSGT00950000182803.B.d.a.n ENSGT00940000161713 ENSGT00940000176232 ENSGT00390000017860.a.a ENSGT00940000159611 ENSGT00950000183035.a.a ENSGT00510000046908.b ENSGT00390000001775.A ENSGT00390000003706.a.b.a ENSGT00390000015364.a.b.a ENSGT00390000015364.a.b.b ENSGT00390000015700.b Characoidei ANCESTRAL SPECIES 47 ENSGT00940000156017 ENSGT00950000182802.D.db.a ENSGT00940000162488.a ENSGT00950000182832.D.b ENSGT00940000161206 ENSGT00950000183115.b.b ENSGT01100000263536.A.a.b ENSGT01100000263536.A.a.a ENSGT01040000240444.A.a.a.a.b ENSGT01030000235435 ENSGT01100000263536.B.c.b ENSGT00940000163592 ENSGT00950000183031.B ENSGT01100000263512.a.a.a.a ENSGT00550000075160 ENSGT00510000047733 #22 ENSGT00950000182915.a.b ENSGT00940000163331.a.b ENSGT00940000163331.b ENSGT00940000163673 ENSGT00950000182803.B.d.a.n ENSGT00940000161713 ENSGT00940000176232 ENSGT00390000017860.a.a ENSGT00940000159611 ENSGT00950000183035.a.a ENSGT00510000046908.b ENSGT00390000001775.A ENSGT00390000003706.a.b.a ENSGT00390000015364.a.b.a ENSGT00390000015364.a.b.b Red-bellied piranha MODERN SPECIES 523 TENT5D (ENSPNAG00000010843) ENSPNAG00000010880 TBX22 (ENSPNAG00000001458) ITM2A (ENSPNAG00000001470) ENSPNAG00000010943 p2ry10 (ENSPNAG00000010948) LPAR4 (ENSPNAG00000010958) ENSPNAG00000010972 cysltr1 (ENSPNAG00000010985) ENSPNAG00000011005 rraga (ENSPNAG00000011028) ENSPNAG00000001501 polr1d (ENSPNAG00000001512) sybl1 (ENSPNAG00000011101) #22 ENSPNAG00000012244 ENSPNAG00000012410 Mexicana tetra MODERN SPECIES 16 sh3bgrl (ENSAMXG00000034050) hmgn6 (ENSAMXG00000031290) TENT5D (ENSAMXG00000013579) ENSAMXG00000037196 TBX22 (ENSAMXG00000013612) ITM2A (ENSAMXG00000013634) ENSAMXG00000026472 p2ry10 (ENSAMXG00000013652) LPAR4 (ENSAMXG00000037358) ENSAMXG00000038062 cysltr1 (ENSAMXG00000026474) ENSAMXG00000013669 rraga (ENSAMXG00000030179) ENSAMXG00000042913 polr1d (ENSAMXG00000036118) sybl1 (ENSAMXG00000035227) #22 ENSAMXG00000013782 rhogd (ENSAMXG00000032903) kctd12b (ENSAMXG00000044100) prps1b (ENSAMXG00000038848) SLC25A53 (ENSAMXG00000042772) SLC25A53 (ENSAMXG00000013810) tmsb1 (ENSAMXG00000040187) zgc:66447 (ENSAMXG00000013821) znf711 (ENSAMXG00000013838) FRMPD3 (ENSAMXG00000013853) ENSAMXG00000029065 zgc:174917 (ENSAMXG00000031887) si:ch211-153b23.5 (ENSAMXG00000013875) si:ch211-153b23.4 (ENSAMXG00000013879) ENSAMXG00000038564 Electric eel MODERN SPECIES 84 rps6kal (ENSEEEG00000000675) POU3F4 (ENSEEEG00000000062) ENSEEEG00000000050 sh3bgrl (ENSEEEG00000022601) TENT5D (ENSEEEG00000022599) TBX22 (ENSEEEG00000022595) ITM2A (ENSEEEG00000022592) ENSEEEG00000022591 p2ry10 (ENSEEEG00000022588) LPAR4 (ENSEEEG00000022587) ENSEEEG00000022585 ENSEEEG00000022581 rraga (ENSEEEG00000022579) ENSEEEG00000022574 polr1d (ENSEEEG00000022571) sybl1 (ENSEEEG00000022570) #22 ENSEEEG00000022563 ENSEEEG00000022561 kctd12b (ENSEEEG00000022559) prps1b (ENSEEEG00000022543) SLC25A53 (ENSEEEG00000022534) tmsb1 (ENSEEEG00000022533) zgc:66447 (ENSEEEG00000022532) znf711 (ENSEEEG00000022531) FRMPD3 (ENSEEEG00000022526) ENSEEEG00000022524 zgc:174917 (ENSEEEG00000022523) ENSEEEG00000022522 Channel catfish MODERN SPECIES 27 ENSIPUG00000014486 sh3bgrl (ENSIPUG00000014499) hmgn6 (ENSIPUG00000014506) TENT5D (ENSIPUG00000014517) TBX22 (ENSIPUG00000014534) ENSIPUG00000014627 Itm2a (ENSIPUG00000014638) Gpr174 (ENSIPUG00000014658) P2RY10 (ENSIPUG00000014664) Lpar4 (ENSIPUG00000014675) cysltr1 (ENSIPUG00000014679) ENSIPUG00000014695 Rraga (ENSIPUG00000014734) ENSIPUG00000014783 polr1d (ENSIPUG00000014810) sybl1 (ENSIPUG00000014826) #22 ENSIPUG00000014878 ENSIPUG00000014903 kctd12b (ENSIPUG00000014922) Prps1 (ENSIPUG00000014929) slc25a53 (ENSIPUG00000015008) tmsb1 (ENSIPUG00000015012) zgc:66447 (ENSIPUG00000015021) znf711 (ENSIPUG00000015037) FRMPD3 (ENSIPUG00000015107) ENSIPUG00000015113 ENSIPUG00000015126 zgc:174917 (ENSIPUG00000015142) si:ch211-153b23.5 (ENSIPUG00000015179) si:ch211-153b23.4 (ENSIPUG00000015205) ENSIPUG00000015213 Cyprinoidei ANCESTRAL SPECIES 74 ENSGT00390000013770 ENSGT00440000033895 ENSGT01090000260076.b.a ENSGT00950000183196.D.b.v ENSGT00390000013284 ENSGT00940000161151 ENSGT00940000157929 ENSGT00940000160541 ENSGT00940000158347.z ENSGT00940000156017 ENSGT00940000162488.a ENSGT01090000260082.d.a.a.c ENSGT00940000153902.b.b ENSGT00940000160622.`b.a ENSGT00550000075160 ENSGT00510000047733 #22 ENSGT00950000182915.a.b ENSGT00940000159242 ENSGT00940000163331.a.b ENSGT00940000163673 ENSGT00950000182803.B.d.a.n ENSGT00940000161713 ENSGT00940000176232 ENSGT00390000017860.a.a ENSGT00940000159611 ENSGT00950000183035.a.a ENSGT00510000046908.b ENSGT00390000001775.A ENSGT00390000003706.a.b.a ENSGT00390000015364.a.b.a ENSGT00390000015364.a.b.b Cyprininae DUPLICATION Cyprininae ANCESTRAL SPECIES 149 ENSGT01100000263536.B.c.b.d ENSGT01090000260076.b.a.u ENSGT00950000183196.D.b.u ENSGT00390000013284 ENSGT00940000161151 ENSGT00940000157929.c ENSGT00940000162488.a.a ENSGT01090000260082.d.a.a.c.a ENSGT00940000153902.b.b ENSGT00940000160622.`b.a ENSGT00940000155920.o.a ENSGT00940000155920.o.b ENSGT00550000075160 ENSGT00510000047733.u #22 ENSGT00950000182915.a.b ENSGT00940000159242.g ENSGT00990000203874 ENSGT01030000234513.B.a.c ENSGT00950000183031.B.a ENSGT00390000008591.a ENSGT00940000160487.c ENSGT00940000176232 ENSGT00390000017860.a.a.d ENSGT00940000159611.j ENSGT00950000183035.a.a.u ENSGT00510000046908.b.b ENSGT00390000001775.A.g ENSGT00390000003706.a.b.a.a ENSGT00390000015364.a.b.a.c Goldfish MODERN SPECIES 5 NEXMIF (ENSCARG00000008738) RLIM (ENSCARG00000008741) glod5 (ENSCARG00000008747) irg1l (ENSCARG00000008757) ENSCARG00000008765 st3gal5 (ENSCARG00000008769) rell2 (ENSCARG00000008774) ENSCARG00000008779 sh3bgrl (ENSCARG00000008784) tbx22 (ENSCARG00000008788) ENSCARG00000008805 asb12b (ENSCARG00000008810) ENSCARG00000008861 SH2D1A (ENSCARG00000009547) polr1d (ENSCARG00000009554) sybl1 (ENSCARG00000009563) #22 rps6kal (ENSCARG00000009682) ENSCARG00000012217 ENSCARG00000012266 ENSCARG00000012270 ENSCARG00000012285 ENSCARG00000012307 ENSCARG00000012333 GJB1 (ENSCARG00000012338) ENSCARG00000012347 GJB1 (ENSCARG00000012350) ENSCARG00000012357 rraga (ENSCARG00000012359) hdac3 (ENSCARG00000012404) ENSCARG00000012563 hspa9 (ENSCARG00000012578) Cyprininae_a ANCESTRAL SPECIES 399 ENSGT00390000013770 ENSGT00440000033895.c.b ENSGT01090000260076.b.a.v ENSGT00950000183196.D.b.v ENSGT00940000157929.d ENSGT00940000160541 ENSGT00940000158347.z ENSGT00940000156017.gb ENSGT00940000155566.r ENSGT00940000162488.a.b ENSGT01090000260082.d.a.a.c.b ENSGT00940000153902.b.b.a ENSGT00940000160622.`b.a.a ENSGT00940000155920.o.b ENSGT00550000075160 ENSGT00510000047733.u #22 ENSGT00950000182915.a.b ENSGT00940000159242.g ENSGT00950000183031.B.a ENSGT00390000008591.a ENSGT00940000160487.c Common carp reference MODERN SPECIES 35 ENSCCRG00000055165 ENSCCRG00000047483 ENSCCRG00000082145 ENSCCRG00000037366 st3gal5 (ENSCCRG00000040488) rell2 (ENSCCRG00000006364) ENSCCRG00000006350 sh3bgrl (ENSCCRG00000059539) tbx22 (ENSCCRG00000032958) ENSCCRG00000073120 msnb (ENSCCRG00000012604) asb12b (ENSCCRG00000077524) ENSCCRG00000012133 ENSCCRG00000075615 polr1d (ENSCCRG00000018978) sybl1 (ENSCCRG00000053058) #22 rps6kal (ENSCCRG00000021930) ENSCCRG00000056191 ENSCCRG00000060135 ENSCCRG00000062555 ENSCCRG00000060968 ENSCCRG00000061496 ENSCCRG00000057983 ENSCCRG00000059705 ENSCCRG00000061820 ENSCCRG00000019462 ENSCCRG00000075926 ENSCCRG00000020259 ENSCCRG00000077721 ENSCCRG00000060028 ENSCCRG00000035119 Golden-line barbel MODERN SPECIES 913 sh3bgrl (ENSSGRG00000023040) ENSSGRG00000023041 msnb (ENSSGRG00000023048) asb12b (ENSSGRG00000023302) arhgef9b (ENSSGRG00000023317) ENSSGRG00000024225 SH2D1A (ENSSGRG00000024226) sybl1 (ENSSGRG00000024227) #22 ENSSGRG00000024228 rps6kal (ENSSGRG00000024235) GJB1 (ENSSGRG00000024319) ENSSGRG00000024320 rraga (ENSSGRG00000024334) hdx (ENSSGRG00000024685) zgc:162858 (ENSSGRG00000024687) ENSSGRG00000024688 ENSSGRG00000024690 ENSSGRG00000024691 ENSSGRG00000024695 ENSSGRG00000024742 ENSSGRG00000024748 Cyprininae ANCESTRAL SPECIES ENSGT00510000047733.v #22 Cyprininae_a ANCESTRAL SPECIES ENSGT00510000047733.v #22 Golden-line barbel MODERN SPECIES 3397 sybl1 (ENSSGRG00000003107) #22 Common carp reference MODERN SPECIES 20 ENSCCRG00000012298 ENSCCRG00000053472 tmem129 (ENSCCRG00000039775) ENSCCRG00000056631 st3gal5 (ENSCCRG00000035930) ENSCCRG00000058087 ENSCCRG00000060456 sh3bgrl (ENSCCRG00000053238) ENSCCRG00000062799 ENSCCRG00000073660 ENSCCRG00000060653 msnb (ENSCCRG00000016511) asb12b (ENSCCRG00000068226) ENSCCRG00000017801 ENSCCRG00000018958 sybl1 (ENSCCRG00000021910) #22 ENSCCRG00000021922 rps6kal (ENSCCRG00000069834) ENSCCRG00000065344 ENSCCRG00000074454 ENSCCRG00000007080 ENSCCRG00000079626 ENSCCRG00000078367 ENSCCRG00000080134 ENSCCRG00000038294 ENSCCRG00000054286 ENSCCRG00000066107 ENSCCRG00000057441 ENSCCRG00000047409 ENSCCRG00000019469 ENSCCRG00000025832 Zebrafish MODERN SPECIES 5 atoh8 (ENSDARG00000037555) ENSDARG00000114748 st3gal5 (ENSDARG00000037556) rell2 (ENSDARG00000071876) ENSDARG00000029890 hmgn6 (ENSDARG00000087636) sh3bgrl (ENSDARG00000058302) tbx22 (ENSDARG00000091748) TENT5D (ENSDARG00000062830) msnb (ENSDARG00000028740) asb12b (ENSDARG00000037558) ENSDARG00000115518 arhgef9b (ENSDARG00000078624) ENSDARG00000074854 polr1d (ENSDARG00000037570) sybl1 (ENSDARG00000030775) #22 ENSDARG00000058579 rps6kal (ENSDARG00000037574) nxf1a (ENSDARG00000086017) ATG2A (ENSDARG00000101507) ENSDARG00000099269 trmt112 (ENSDARG00000071878) ENSDARG00000071879 ENSDARG00000058386 ENSDARG00000071880 ENSDARG00000103286 ENSDARG00000090986 zgc:162144 (ENSDARG00000037603) stx5a (ENSDARG00000025033) ENSDARG00000090997 dnajc4 (ENSDARG00000024090) Euteleosteomorpha ANCESTRAL SPECIES 74 ENSGT00940000164351 ENSGT00390000011425.A ENSGT00940000156017.eb ENSGT00950000182802.D ENSGT00940000162488.b.b ENSGT00940000166733 ENSGT00940000161206 ENSGT00950000183115.b.b ENSGT01100000263536.A.a.b ENSGT01100000263536.A.a.a ENSGT01040000240444.A.a.a.a.b ENSGT01030000235435 ENSGT01100000263536.B.c.b ENSGT01100000263512.a.a.a.a ENSGT00550000075160 ENSGT00510000047733 #22 ENSGT00950000182915.a.b ENSGT00940000155374.g.b ENSGT00950000183097.a.a.a.f.a.b ENSGT00390000012030.b.a Acanthomorphata ANCESTRAL SPECIES 1 ENSGT00390000017581.a ENSGT00940000164351 ENSGT00940000156017.eb ENSGT00950000182802.D ENSGT00940000162488.b.b ENSGT00950000182832.D.b ENSGT00940000161206 ENSGT00950000183115.b.b ENSGT01100000263536.A.a.b ENSGT01100000263536.A.a.a ENSGT01040000240444.A.a.a.a.b ENSGT01030000235435 ENSGT01100000263536.B.c.b ENSGT01100000263512.a.a.a.a ENSGT00550000075160 ENSGT00510000047733 #22 ENSGT01030000235147 ENSGT00950000183026.A.a.a.a ENSGT00390000017153.a ENSGT00940000168334 ENSGT00940000155777.a ENSGT00390000000080.a.a ENSGT00940000153716.B ENSGT00950000183079.A.b.c.a.b ENSGT00940000158380.a ENSGT00730000111282.a ENSGT00940000165786 ENSGT00390000010512 ENSGT00510000047104 ENSGT00390000016655.a.b ENSGT00940000155266 Euacanthomorphacea ANCESTRAL SPECIES 10 ENSGT00390000017581.a ENSGT00940000164351 ENSGT00940000156017.eb ENSGT00950000182802.D ENSGT00940000162488.b.b ENSGT00950000182832.D.b ENSGT00940000161206 ENSGT00950000183115.b.b ENSGT01100000263536.A.a.b ENSGT01100000263536.A.a.a ENSGT01040000240444.A.a.a.a.b ENSGT01030000235435 ENSGT01100000263536.B.c.b ENSGT01100000263512.a.a.a.a ENSGT00550000075160 ENSGT00510000047733 #22 ENSGT01030000235147 ENSGT00950000183026.A.a.a.a ENSGT01060000249241 ENSGT00390000017153.a ENSGT00940000168334 ENSGT00940000155777.a ENSGT00390000000080.a.a ENSGT00940000153716.B ENSGT00950000183079.A.b.c.a.b ENSGT00940000158380.a ENSGT00730000111282.a ENSGT00940000165786 ENSGT00390000010512 ENSGT00510000047104 ENSGT00390000016655.a.b Percomorphaceae ANCESTRAL SPECIES 11 ENSGT00390000017581.a ENSGT00940000164351 ENSGT00940000156017.eb ENSGT00950000182802.D ENSGT00940000162488.b.b ENSGT00950000182832.D.b ENSGT00940000161206 ENSGT00950000183115.b.b ENSGT01100000263536.A.a.b ENSGT01100000263536.A.a.a ENSGT01040000240444.A.a.a.a.b ENSGT01030000235435 ENSGT01100000263536.B.c.b ENSGT01100000263512.a.a.a.a ENSGT00550000075160 ENSGT00510000047733 #22 ENSGT00950000183026.A.a.a.a ENSGT01060000249241 ENSGT00390000017153.a ENSGT00940000168334 ENSGT00940000155777.a ENSGT00390000000080.a.a ENSGT00940000153716.B ENSGT00950000183079.A.b.c.a.b ENSGT00940000158380.a ENSGT00730000111282.a ENSGT00940000165786 ENSGT00390000010512 ENSGT00510000047104 ENSGT00390000016655.a.b ENSGT00940000155266 Tiger tail seahorse MODERN SPECIES 332 hdx (ENSHCOG00000003410) rps6kal (ENSHCOG00000003399) POU3F4 (ENSHCOG00000003369) ENSHCOG00000003355 sh3bgrl (ENSHCOG00000003351) hmgn6 (ENSHCOG00000003344) TENT5D (ENSHCOG00000003335) TBX22 (ENSHCOG00000003323) ITM2A (ENSHCOG00000003314) GPR174 (ENSHCOG00000003307) p2ry10 (ENSHCOG00000003300) LPAR4 (ENSHCOG00000003288) cysltr1 (ENSHCOG00000003281) ENSHCOG00000003271 polr1d (ENSHCOG00000003258) sybl1 (ENSHCOG00000003237) #22 ENSHCOG00000003210 pdgfrl (ENSHCOG00000000095) slc7a2 (ENSHCOG00000003118) mtmr7a (ENSHCOG00000003098) cnot7 (ENSHCOG00000003080) zdhhc2 (ENSHCOG00000003072) eif4ebp3l (ENSHCOG00000003055) ENSHCOG00000003048 TENM2 (ENSHCOG00000003038) ENSHCOG00000002998 ENSHCOG00000002990 hmmr (ENSHCOG00000002975) cyfip2 (ENSHCOG00000002967) itk (ENSHCOG00000002937) ENSHCOG00000000601 Percomorphaceae_B ANCESTRAL SPECIES 14 ENSGT00940000164351 ENSGT00770000121762 ENSGT00940000156017.eb ENSGT00950000182802.D ENSGT00940000162488.b.b ENSGT00940000166733 ENSGT00940000161206 ENSGT00950000183115.b.b ENSGT01100000263536.A.a.b ENSGT01100000263536.A.a.a ENSGT01040000240444.A.a.a.a.b ENSGT01030000235435 ENSGT01100000263536.B.c.b ENSGT01100000263512.a.a.a.a ENSGT00550000075160 ENSGT00510000047733 #22 ENSGT01030000235147 ENSGT00950000183026.A.a.a.a ENSGT01060000249241 ENSGT00390000017153.a ENSGT00940000168334 ENSGT00940000155777.a ENSGT00390000000080.a.a ENSGT00940000153716.B ENSGT00950000183079.A.b.c.a.b ENSGT00940000158380.a ENSGT00730000111282.a ENSGT00940000165786 ENSGT00390000010512 ENSGT00510000047104 ENSGT00390000016655.a.b Ovalentaria ANCESTRAL SPECIES 15 ENSGT00390000017581.a ENSGT00940000164351 ENSGT00770000121762 ENSGT00940000156017.eb ENSGT00950000182802.D ENSGT00940000162488.b.b ENSGT00940000161206 ENSGT00950000183115.b.b ENSGT01100000263536.A.a.b ENSGT01100000263536.A.a.a ENSGT01040000240444.A.a.a.a.b ENSGT01030000235435 ENSGT01100000263536.B.c.b ENSGT01100000263512.a.a.a.a ENSGT00550000075160 ENSGT00510000047733 #22 ENSGT01030000235147 ENSGT00950000183026.A.a.a.a ENSGT00390000017153.a ENSGT00940000168334 ENSGT00940000155777.a ENSGT00390000000080.a.a ENSGT00940000153716.B ENSGT00950000183079.A.b.c.a.b ENSGT00940000158380.a ENSGT00730000111282.a ENSGT00940000165786 ENSGT00390000010512 ENSGT00510000047104 ENSGT00390000016655.a.b ENSGT00940000155266 Atherinomorphae ANCESTRAL SPECIES 9 ENSGT00940000164351 ENSGT00770000121762 ENSGT00940000156017.eb ENSGT00950000182802.D ENSGT00940000162488.b.b ENSGT00950000182832.D.b.c ENSGT00940000161206 ENSGT00950000183115.b.b ENSGT01100000263536.A.a.b ENSGT01100000263536.A.a.a ENSGT01040000240444.A.a.a.a.b ENSGT01030000235435 ENSGT01100000263536.B.c.b ENSGT01100000263512.a.a.a.a ENSGT00550000075160 ENSGT00510000047733 #22 ENSGT00940000177791 ENSGT00950000183026.A.a.a.a ENSGT00390000017153.a ENSGT00940000168334 ENSGT00940000155777.a ENSGT00390000000080.a.a ENSGT00940000153716.B ENSGT00950000183079.A.b.c.a.b ENSGT00940000158380.a ENSGT00730000111282.a ENSGT00940000165786 ENSGT00390000010512 ENSGT00510000047104 ENSGT00390000016655.a.b ENSGT00940000155266 Cyprinodontiformes ANCESTRAL SPECIES 8 ENSGT00940000164351 ENSGT00770000121762 ENSGT00940000156017.eb ENSGT00950000182802.D ENSGT00940000162488.b.b ENSGT00950000182832.D.b.c ENSGT00940000161206 ENSGT00950000183115.b.b ENSGT01100000263536.A.a.b ENSGT01100000263536.A.a.a ENSGT01040000240444.A.a.a.a.b ENSGT01030000235435 ENSGT01100000263536.B.c.b ENSGT01100000263512.a.a.a.a ENSGT00550000075160 ENSGT00510000047733 #22 ENSGT00940000177791 ENSGT00950000183026.A.a.a.a ENSGT00390000017153.a ENSGT00940000168334 ENSGT00940000155777.a ENSGT00390000000080.a.a ENSGT00940000153716.B ENSGT00950000183079.A.b.c.a.b ENSGT00940000158380.a ENSGT00730000111282.a ENSGT00940000165786 ENSGT00390000010512 ENSGT00510000047104 ENSGT00390000016655.a.b ENSGT00940000155266 Aplocheiloidei ANCESTRAL SPECIES 46 ENSGT00940000161429 ENSGT00390000017581.a ENSGT00940000164351 ENSGT00940000156017.eb ENSGT00950000182802.D ENSGT00940000162488.b.b ENSGT00940000161206 ENSGT00950000183115.b.b ENSGT01100000263536.A.a.b ENSGT01100000263536.A.a.a ENSGT01040000240444.A.a.a.a.b ENSGT01030000235435 ENSGT01100000263536.B.c.b ENSGT01100000263512.a.a.a.a ENSGT00550000075160 ENSGT00510000047733 #22 ENSGT00950000183026.A.a.a.a ENSGT00390000017153.a ENSGT00940000168334 ENSGT00940000155777.a ENSGT00390000000080.a.a ENSGT00940000153716.B ENSGT00950000183079.A.b.c.a.b ENSGT00940000158380.a ENSGT00730000111282.a ENSGT00940000165786 ENSGT00390000010512 ENSGT00510000047104 ENSGT00390000016655.a.b ENSGT00940000155266 ENSGT00390000015476 Turquoise killifish MODERN SPECIES 1610 ENSNFUG00015002531 ENSNFUG00015002526 TBX22 (ENSNFUG00015002521) ITM2A (ENSNFUG00015002514) ENSNFUG00015002507 P2RY10 (ENSNFUG00015002502) LPAR4 (ENSNFUG00015002499) ENSNFUG00015002495 ENSNFUG00015002492 CYSLTR1 (ENSNFUG00015002490) ENSNFUG00015002488 ENSNFUG00015002486 ENSNFUG00015002484 ENSNFUG00015002478 ENSNFUG00015002471 SYBL1 (ENSNFUG00015002463) #22 ENSNFUG00015002441 pdgfrl (ENSNFUG00015002432) SLC7A2 (ENSNFUG00015002400) ENSNFUG00015002389 mtmr7a (ENSNFUG00015002346) CNOT7 (ENSNFUG00015002334) ENSNFUG00015002328 FGF20B (ENSNFUG00015002324) EFHA2 (ENSNFUG00015002127) ENSNFUG00015002053 her11 (ENSNFUG00015002050) her5 (ENSNFUG00015002048) C14H8ORF40 (ENSNFUG00015002046) OLA.28460 (ENSNFUG00015002019) GPR137 (ENSNFUG00015002014) Mangrove rivulus MODERN SPECIES 49 ENSKMAG00000015702 ENSKMAG00000015672 sh3bgrl (ENSKMAG00000015648) hmgn6 (ENSKMAG00000015625) ENSKMAG00000015597 ENSKMAG00000015560 TBX22 (ENSKMAG00000015530) ITM2A (ENSKMAG00000015421) ENSKMAG00000015374 p2ry10 (ENSKMAG00000015351) LPAR4 (ENSKMAG00000015324) ENSKMAG00000015302 cysltr1 (ENSKMAG00000015292) ENSKMAG00000015272 polr1d (ENSKMAG00000015256) sybl1 (ENSKMAG00000015225) #22 ENSKMAG00000015133 pdgfrl (ENSKMAG00000015088) slc7a2 (ENSKMAG00000015061) mtmr7a (ENSKMAG00000015002) cnot7 (ENSKMAG00000014969) zdhhc2 (ENSKMAG00000014918) MICU3 (ENSKMAG00000014887) fgf20b (ENSKMAG00000014863) ENSKMAG00000014847 pfdn6 (ENSKMAG00000014819) mmgt1 (ENSKMAG00000014790) ints6l (ENSKMAG00000014767) mospd1 (ENSKMAG00000014739) pabir2 (ENSKMAG00000014691) hprt1 (ENSKMAG00000014644) Cyprinodontoidei ANCESTRAL SPECIES 19 ENSGT00940000164351 ENSGT00770000121762 ENSGT00940000156017.eb ENSGT00950000182802.D ENSGT00940000162488.b.b ENSGT00950000182832.D.b.c ENSGT00940000161206 ENSGT00950000183115.b.b ENSGT01100000263536.A.a.b ENSGT01100000263536.A.a.a ENSGT01040000240444.A.a.a.a.b ENSGT01030000235435 ENSGT01100000263536.B.c.b ENSGT01100000263512.a.a.a.a ENSGT00550000075160 ENSGT00510000047733 #22 ENSGT00940000177791 ENSGT00950000183026.A.a.a.a ENSGT00390000017153.a ENSGT00940000168334 ENSGT00940000155777.a ENSGT00390000000080.a.a ENSGT00940000153716.B ENSGT00950000183079.A.b.c.a.b ENSGT00940000158380.a ENSGT00730000111282.a ENSGT00940000165786 ENSGT00390000010512 ENSGT00510000047104 ENSGT00390000016655.a.b ENSGT00940000155266 Poeciliinae ANCESTRAL SPECIES 11 ENSGT00940000164351 ENSGT00770000121762 ENSGT00940000156017.eb ENSGT00950000182802.D ENSGT00940000162488.b.b ENSGT00950000182832.D.b.c ENSGT00940000161206 ENSGT00950000183115.b.b ENSGT01100000263536.A.a.b ENSGT01100000263536.A.a.a ENSGT01040000240444.A.a.a.a.b ENSGT01030000235435 ENSGT01100000263536.B.c.b ENSGT01100000263512.a.a.a.a ENSGT00550000075160 ENSGT00510000047733 #22 ENSGT00950000183026.A.a.a.a ENSGT00390000017153.a ENSGT00940000168334 ENSGT00940000155777.a ENSGT00390000000080.a.a ENSGT00940000153716.B ENSGT00950000183079.A.b.c.a.b ENSGT00940000158380.a ENSGT00730000111282.a ENSGT00940000165786 ENSGT00390000010512 ENSGT00510000047104 ENSGT00390000016655.a.b ENSGT00940000155266 ENSGT00390000015476 Poecilia ANCESTRAL SPECIES 21 ENSGT00940000164351 ENSGT00770000121762 ENSGT00940000156017.eb ENSGT00950000182802.D ENSGT00940000162488.b.b ENSGT00950000182832.D.b.c ENSGT00940000161206 ENSGT00950000183115.b.b ENSGT01100000263536.A.a.b ENSGT01100000263536.A.a.a ENSGT01040000240444.A.a.a.a.b ENSGT01030000235435 ENSGT01100000263536.B.c.b ENSGT01100000263512.a.a.a.a ENSGT00550000075160 ENSGT00510000047733 #22 ENSGT00950000183026.A.a.a.a ENSGT00390000017153.a ENSGT00940000168334 ENSGT00940000155777.a ENSGT00390000000080.a.a ENSGT00940000153716.B ENSGT00950000183079.A.b.c.a.b ENSGT00940000158380.a ENSGT00730000111282.a ENSGT00940000165786 ENSGT00390000010512 ENSGT00510000047104 ENSGT00390000016655.a.b ENSGT00940000155266 ENSGT00390000015476 NAME_6 ANCESTRAL SPECIES 72 ENSGT00940000164351 ENSGT00770000121762 ENSGT00940000156017.eb ENSGT00950000182802.D ENSGT00940000162488.b.b ENSGT00950000182832.D.b.c ENSGT00940000161206 ENSGT00950000183115.b.b ENSGT01100000263536.A.a.b ENSGT01100000263536.A.a.a ENSGT01040000240444.A.a.a.a.b ENSGT01030000235435 ENSGT01100000263536.B.c.b ENSGT01100000263512.a.a.a.a ENSGT00550000075160 ENSGT00510000047733 #22 ENSGT00950000183026.A.a.a.a ENSGT00390000017153.a ENSGT00940000168334 ENSGT00940000155777.a ENSGT00390000000080.a.a ENSGT00940000153716.B ENSGT00950000183079.A.b.c.a.b ENSGT00940000158380.a ENSGT00730000111282.a ENSGT00940000165786 ENSGT00390000010512 ENSGT00510000047104 ENSGT00390000016655.a.b ENSGT00940000155266 ENSGT00390000015476 Amazon molly MODERN SPECIES 317 ENSPFOG00000024184 sh3bgrl (ENSPFOG00000003408) sh3bgrl (ENSPFOG00000003363) TENT5D (ENSPFOG00000003339) TENT5D (ENSPFOG00000003243) ENSPFOG00000003251 TBX22 (ENSPFOG00000003081) ITM2A (ENSPFOG00000003036) ENSPFOG00000003024 p2ry10 (ENSPFOG00000002972) LPAR4 (ENSPFOG00000002965) ENSPFOG00000021693 cysltr1 (ENSPFOG00000020487) ENSPFOG00000002673 polr1d (ENSPFOG00000023343) sybl1 (ENSPFOG00000002540) #22 ENSPFOG00000002420 pdgfrl (ENSPFOG00000002298) slc7a2 (ENSPFOG00000002011) mtmr7a (ENSPFOG00000001723) cnot7 (ENSPFOG00000001614) zdhhc2 (ENSPFOG00000021730) MICU3 (ENSPFOG00000001365) fgf20b (ENSPFOG00000001230) her11 (ENSPFOG00000024750) her5 (ENSPFOG00000001200) pfdn6 (ENSPFOG00000001138) mmgt1 (ENSPFOG00000001056) ints6l (ENSPFOG00000000878) mospd1 (ENSPFOG00000000719) pabir2 (ENSPFOG00000000689) Sailfin molly MODERN SPECIES 542 ABCC1 (ENSPLAG00000009609) cysltr1 (ENSPLAG00000009624) ENSPLAG00000009660 polr1d (ENSPLAG00000009675) sybl1 (ENSPLAG00000009704) #22 ENSPLAG00000009721 pdgfrl (ENSPLAG00000009728) slc7a2 (ENSPLAG00000009757) mtmr7a (ENSPLAG00000009770) cnot7 (ENSPLAG00000009798) zdhhc2 (ENSPLAG00000009832) Guppy MODERN SPECIES 440 POU3F4 (ENSPREG00000021885) ENSPREG00000021893 ENSPREG00000021898 sh3bgrl (ENSPREG00000021923) hmgn6 (ENSPREG00000021952) ENSPREG00000021963 ENSPREG00000021972 TBX22 (ENSPREG00000021982) ITM2A (ENSPREG00000021993) ENSPREG00000021998 p2ry10 (ENSPREG00000022004) LPAR4 (ENSPREG00000022006) cysltr1 (ENSPREG00000022009) ENSPREG00000022019 polr1d (ENSPREG00000022032) sybl1 (ENSPREG00000022039) #22 ENSPREG00000022054 pdgfrl (ENSPREG00000022081) slc7a2 (ENSPREG00000022094) mtmr7a (ENSPREG00000022118) cnot7 (ENSPREG00000022134) zdhhc2 (ENSPREG00000022155) MICU3 (ENSPREG00000022180) fgf20b (ENSPREG00000022189) her11 (ENSPREG00000022194) her5 (ENSPREG00000022196) pfdn6 (ENSPREG00000022202) mmgt1 (ENSPREG00000022209) ints6l (ENSPREG00000022215) mospd1 (ENSPREG00000022231) pabir2 (ENSPREG00000022239) Platyfish MODERN SPECIES 15 ENSXMAG00000011835 ENSXMAG00000011821 sh3bgrl (ENSXMAG00000011817) ENSXMAG00000029413 hmgn6 (ENSXMAG00000004836) ENSXMAG00000004824 ENSXMAG00000004812 TBX22 (ENSXMAG00000023372) ITM2A (ENSXMAG00000030069) ENSXMAG00000021395 p2ry10 (ENSXMAG00000018321) LPAR4 (ENSXMAG00000018318) ENSXMAG00000023944 ENSXMAG00000017543 polr1d (ENSXMAG00000017538) sybl1 (ENSXMAG00000017522) #22 ENSXMAG00000017509 pdgfrl (ENSXMAG00000017502) slc7a2 (ENSXMAG00000017480) mtmr7a (ENSXMAG00000017456) cnot7 (ENSXMAG00000017447) zdhhc2 (ENSXMAG00000021005) MICU3 (ENSXMAG00000017425) fgf20b (ENSXMAG00000017419) her11 (ENSXMAG00000029186) her5 (ENSXMAG00000025128) pfdn6 (ENSXMAG00000022074) mmgt1 (ENSXMAG00000023938) ints6l (ENSXMAG00000017374) mospd1 (ENSXMAG00000027887) pabir2 (ENSXMAG00000017365) NAME_4 ANCESTRAL SPECIES 64 ENSGT00940000159242 ENSGT00940000161429 ENSGT00390000017581.a ENSGT00940000164351 ENSGT00940000156017.eb ENSGT00950000182802.D ENSGT00940000162488.b.b ENSGT00940000161206 ENSGT00950000183115.b.b ENSGT01100000263536.A.a.b ENSGT01100000263536.A.a.a ENSGT01040000240444.A.a.a.a.b ENSGT01100000263536.B.c.b ENSGT01100000263512.a.a.a.a ENSGT00550000075160 ENSGT00510000047733 #22 ENSGT00940000177791 ENSGT00950000183026.A.a.a.a ENSGT00390000017153.a ENSGT00940000168334 ENSGT00940000155777.a ENSGT00390000000080.a.a ENSGT00940000153716.B ENSGT00950000183079.A.b.c.a.b ENSGT00940000158380.a ENSGT00730000111282.a ENSGT00940000165786 ENSGT00390000010512 ENSGT00510000047104 ENSGT00390000016655.a.b ENSGT00940000155266 Mummichog MODERN SPECIES 2236 rps6kal (ENSFHEG00000014893) POU3F4 (ENSFHEG00000014912) ENSFHEG00000014917 ENSFHEG00000015018 sh3bgrl (ENSFHEG00000015052) hmgn6 (ENSFHEG00000015073) TENT5D (ENSFHEG00000015095) TBX22 (ENSFHEG00000015245) ITM2A (ENSFHEG00000015267) ENSFHEG00000015272 p2ry10 (ENSFHEG00000015284) LPAR4 (ENSFHEG00000015289) cysltr1 (ENSFHEG00000015294) ENSFHEG00000015383 polr1d (ENSFHEG00000015410) sybl1 (ENSFHEG00000015443) #22 ENSFHEG00000015471 pdgfrl (ENSFHEG00000015484) slc7a2 (ENSFHEG00000015532) mtmr7a (ENSFHEG00000015585) cnot7 (ENSFHEG00000015650) zdhhc2 (ENSFHEG00000015693) MICU3 (ENSFHEG00000015711) fgf20b (ENSFHEG00000015732) her11 (ENSFHEG00000015749) her5 (ENSFHEG00000015757) pfdn6 (ENSFHEG00000015772) mmgt1 (ENSFHEG00000015792) ints6l (ENSFHEG00000015799) mospd1 (ENSFHEG00000015824) pabir2 (ENSFHEG00000015871) Sheepshead minnow MODERN SPECIES 164 ENSCVAG00000018131 ELP1 (ENSCVAG00000018220) CPXM1 (ENSCVAG00000018312) SMU1 (ENSCVAG00000018379) CPLX1 (ENSCVAG00000000481) PCGF3 (ENSCVAG00000018442) SLC49A3 (ENSCVAG00000018482) ENSCVAG00000018520 polr1d (ENSCVAG00000018527) sybl1 (ENSCVAG00000018545) #22 ENSCVAG00000018556 ENSCVAG00000018583 pdgfrl (ENSCVAG00000018595) slc7a2 (ENSCVAG00000018667) mtmr7a (ENSCVAG00000018713) cnot7 (ENSCVAG00000018756) zdhhc2 (ENSCVAG00000018868) MICU3 (ENSCVAG00000018888) fgf20b (ENSCVAG00000018896) her11 (ENSCVAG00000018906) her5 (ENSCVAG00000018928) pfdn6 (ENSCVAG00000018951) mmgt1 (ENSCVAG00000000495) ints6l (ENSCVAG00000018973) mospd1 (ENSCVAG00000018981) Oryzias ANCESTRAL SPECIES 17 ENSGT00940000159242 ENSGT00940000161429 ENSGT00390000017581.a ENSGT00940000164351 ENSGT00940000156017.eb ENSGT00950000182802.D ENSGT00940000162488.b.b ENSGT00940000161206 ENSGT00950000183115.b.b ENSGT01100000263536.A.a.b ENSGT01100000263536.A.a.a ENSGT01040000240444.A.a.a.a.b ENSGT01100000263536.B.c.b ENSGT01100000263512.a.a.a.a ENSGT00550000075160 ENSGT00510000047733 #22 ENSGT00950000183026.A.a.a.a ENSGT00390000017153.a ENSGT00940000168334 ENSGT00940000155777.a ENSGT00390000000080.a.a ENSGT00940000153716.B ENSGT00950000183079.A.b.c.a.b ENSGT00940000158380.a ENSGT00730000111282.a ENSGT00940000165786 ENSGT00390000010512 ENSGT00510000047104 ENSGT00390000016655.a.b ENSGT00940000155266 ENSGT00390000015476 Oryzias_a ANCESTRAL SPECIES 47 ENSGT00940000161429 ENSGT00390000017581.a ENSGT00940000164351 ENSGT00940000156017.eb ENSGT00950000182802.D ENSGT00940000162488.b.b ENSGT00940000161206 ENSGT00950000183115.b.b ENSGT01100000263536.A.a.b ENSGT01100000263536.A.a.a ENSGT01040000240444.A.a.a.a.b ENSGT01100000263536.B.c.b ENSGT01100000263512.a.a.a.a ENSGT00550000075160 ENSGT00510000047733 #22 ENSGT00950000183026.A.a.a.a ENSGT00390000017153.a ENSGT00940000168334 ENSGT00940000155777.a ENSGT00390000000080.a.a ENSGT00940000153716.B ENSGT00950000183079.A.b.c.a.b ENSGT00940000158380.a ENSGT00730000111282.a ENSGT00940000165786 ENSGT00390000010512 ENSGT00510000047104 ENSGT00390000016655.a.b ENSGT00940000155266 ENSGT00390000015476 Chinese medaka MODERN SPECIES 1058 POU3F4 (ENSOSIG00000001249) ENSOSIG00000001246 ENSOSIG00000001244 ITM2A (ENSOSIG00000001242) ENSOSIG00000001241 p2ry10 (ENSOSIG00000001240) cysltr1 (ENSOSIG00000001238) ENSOSIG00000001237 polr1d (ENSOSIG00000001236) sybl1 (ENSOSIG00000001235) #22 mtus1a (ENSOSIG00000001230) slc7a2 (ENSOSIG00000001225) mtmr7a (ENSOSIG00000001206) ENSOSIG00000001203 zdhhc2 (ENSOSIG00000000891) MICU3 (ENSOSIG00000000841) fgf20b (ENSOSIG00000000833) ENSOSIG00000000832 her11 (ENSOSIG00000000829) her5 (ENSOSIG00000019105) pfdn6 (ENSOSIG00000019103) mmgt1 (ENSOSIG00000019101) ints6l (ENSOSIG00000018687) mospd1 (ENSOSIG00000018655) pabir2 (ENSOSIG00000018651) Japanese Medaka HdrR MODERN SPECIES 1 hspa9 (ENSORLG00000010637) POU3F4 (ENSORLG00000010578) ENSORLG00000025422 ENSORLG00000010429 sh3bgrl (ENSORLG00000025296) hmgn6 (ENSORLG00000022423) ENSORLG00000028805 TBX22 (ENSORLG00000010380) ITM2A (ENSORLG00000010368) ENSORLG00000010321 p2ry10 (ENSORLG00000023607) lpar4 (ENSORLG00000010315) cysltr1 (ENSORLG00000010305) ednr (ENSORLG00000010292) polr1d (ENSORLG00000010257) sybl1 (ENSORLG00000010247) #22 ENSORLG00000010227 pdgfrl (ENSORLG00000010189) slc7a2 (ENSORLG00000010166) mtmr7a (ENSORLG00000010074) cnot7 (ENSORLG00000029772) zdhhc2 (ENSORLG00000026535) MICU3 (ENSORLG00000029285) fgf20b (ENSORLG00000026768) her5 (ENSORLG00000009833) pfdn6 (ENSORLG00000010004) her11 (ENSORLG00000010016) mmgt1 (ENSORLG00000024701) ints6l (ENSORLG00000009994) mospd1 (ENSORLG00000009968) pabir2 (ENSORLG00000009949) Oryzias_b ANCESTRAL SPECIES 20 ENSGT00940000159242 ENSGT00940000161429 ENSGT00390000017581.a ENSGT00940000164351 ENSGT00940000156017.eb ENSGT00980000199388 ENSGT00940000162488.b.b ENSGT00940000161206 ENSGT00950000183115.b.b ENSGT01100000263536.A.a.b ENSGT01100000263536.A.a.a ENSGT01040000240444.A.a.a.a.b ENSGT01100000263536.B.c.b ENSGT01100000263512.a.a.a.a ENSGT00550000075160 ENSGT00510000047733 #22 ENSGT00950000183026.A.a.a.a ENSGT00390000017153.a ENSGT00940000168334 ENSGT00940000155777.a ENSGT00390000000080.a.a ENSGT00940000153716.B ENSGT00950000183079.A.b.c.a.b ENSGT00940000158380.a ENSGT00730000111282.a ENSGT00940000165786 ENSGT00390000010512 ENSGT00510000047104 ENSGT00390000016655.a.b ENSGT00940000155266 ENSGT00390000015476 Javanese ricefish MODERN SPECIES 1 POU3F4 (ENSOJAG00000010612) ENSOJAG00000010605 ENSOJAG00000010587 ENSOJAG00000010580 ENSOJAG00000010546 sh3bgrl (ENSOJAG00000010496) ENSOJAG00000010481 TBX22 (ENSOJAG00000010463) ITM2A (ENSOJAG00000010416) ENSOJAG00000010409 p2ry10 (ENSOJAG00000010405) LPAR4 (ENSOJAG00000010401) cysltr1 (ENSOJAG00000010396) ENSOJAG00000010383 polr1d (ENSOJAG00000010367) sybl1 (ENSOJAG00000010335) #22 ENSOJAG00000010310 pdgfrl (ENSOJAG00000010298) slc7a2 (ENSOJAG00000010238) mtmr7a (ENSOJAG00000009220) cnot7 (ENSOJAG00000009032) zdhhc2 (ENSOJAG00000008819) MICU3 (ENSOJAG00000008776) fgf20b (ENSOJAG00000008750) her11 (ENSOJAG00000008726) her5 (ENSOJAG00000008702) pfdn6 (ENSOJAG00000008680) mmgt1 (ENSOJAG00000008637) mospd1 (ENSOJAG00000008517) pabir2 (ENSOJAG00000008367) hprt1 (ENSOJAG00000008186) Indian medaka MODERN SPECIES 16 rps6kal (ENSOMEG00000014596) POU3F4 (ENSOMEG00000014622) ENSOMEG00000000363 ENSOMEG00000000905 sh3bgrl (ENSOMEG00000014658) hmgn7 (ENSOMEG00000014678) ENSOMEG00000000367 TBX22 (ENSOMEG00000014761) ITM2A (ENSOMEG00000014792) ENSOMEG00000014809 p2ry10 (ENSOMEG00000014818) LPAR4 (ENSOMEG00000014838) cysltr1 (ENSOMEG00000014852) ENSOMEG00000014885 polr1d (ENSOMEG00000014912) sybl1 (ENSOMEG00000014939) #22 ENSOMEG00000014984 pdgfrl (ENSOMEG00000000378) slc7a2 (ENSOMEG00000015084) mtmr7a (ENSOMEG00000015106) cnot7 (ENSOMEG00000015155) zdhhc2 (ENSOMEG00000015217) MICU3 (ENSOMEG00000015289) fgf20b (ENSOMEG00000015351) her11 (ENSOMEG00000015363) her5 (ENSOMEG00000015379) pfdn6 (ENSOMEG00000015407) mmgt1 (ENSOMEG00000015432) ints6l (ENSOMEG00000000775) mospd1 (ENSOMEG00000015571) pabir2 (ENSOMEG00000015613) Ovalentaria_B ANCESTRAL SPECIES 13 ENSGT00940000159242 ENSGT00940000161429 ENSGT00390000017581.a ENSGT00940000164351 ENSGT00940000156017.eb ENSGT00950000182802.D ENSGT00940000162488.b.b ENSGT00950000183115.b.b ENSGT01100000263536.A.a.b ENSGT01100000263536.A.a.a ENSGT01040000240444.A.a.a.a.b ENSGT01030000235435 ENSGT01100000263536.B.c.b ENSGT01100000263512.a.a.a.a ENSGT00550000075160 ENSGT00510000047733 #22 ENSGT01030000235147 ENSGT00950000183026.A.a.a.a ENSGT00390000017153.a ENSGT00940000168334 ENSGT00940000155777.a ENSGT00390000000080.a.a ENSGT00940000153716.B ENSGT00950000183079.A.b.c.a.b ENSGT00940000158380.a ENSGT00730000111282.a ENSGT00940000165786 ENSGT00390000010512 ENSGT00510000047104 ENSGT00390000016655.a.b ENSGT00940000155266 Pomacentridae ANCESTRAL SPECIES 4 ENSGT00940000159242 ENSGT00940000161429 ENSGT00390000017581.a ENSGT00940000164351 ENSGT00940000156017.eb ENSGT00950000182802.D ENSGT00940000162488.b.b ENSGT00940000161206 ENSGT00950000183115.b.b ENSGT01100000263536.A.a.b ENSGT01100000263536.A.a.a ENSGT01040000240444.A.a.a.a.b ENSGT01100000263536.B.c.b ENSGT01100000263512.a.a.a.a ENSGT00550000075160 ENSGT00510000047733 #22 ENSGT01030000235147 ENSGT00950000183026.A.a.a.a ENSGT00390000017153.a ENSGT00940000168334 ENSGT00940000155777.a ENSGT00390000000080.a.a ENSGT00940000153716.B ENSGT00950000183079.A.b.c.a.b ENSGT00940000158380.a ENSGT00730000111282.a ENSGT00940000165786 ENSGT00390000010512 ENSGT00510000047104 ENSGT00390000016655.a.b ENSGT00940000155266 Pomacentridae_A ANCESTRAL SPECIES 17 ENSGT00940000159242 ENSGT00940000161429 ENSGT00390000017581.a ENSGT00940000164351 ENSGT00940000156017.eb ENSGT00950000182802.D ENSGT00940000162488.b.b ENSGT00940000161206 ENSGT00950000183115.b.b ENSGT01100000263536.A.a.b ENSGT01100000263536.A.a.a ENSGT01040000240444.A.a.a.a.b ENSGT01100000263536.B.c.b ENSGT01100000263512.a.a.a.a ENSGT00550000075160 ENSGT00510000047733 #22 ENSGT01030000235147 ENSGT00950000183026.A.a.a.a ENSGT00390000017153.a ENSGT00940000168334 ENSGT00940000155777.a ENSGT00390000000080.a.a ENSGT00940000153716.B ENSGT00950000183079.A.b.c.a.b ENSGT00940000158380.a ENSGT00730000111282.a ENSGT00940000165786 ENSGT00390000010512 ENSGT00510000047104 ENSGT00390000016655.a.b ENSGT00940000155266 Amphiprion ANCESTRAL SPECIES 26 ENSGT00940000161429 ENSGT00390000017581.a ENSGT00940000164351 ENSGT00940000156017.eb ENSGT00950000182802.D ENSGT00940000162488.b.b ENSGT00950000182832.D.b ENSGT00940000161206 ENSGT00950000183115.b.b ENSGT01100000263536.A.a.b ENSGT01100000263536.A.a.a ENSGT01040000240444.A.a.a.a.b ENSGT01100000263536.B.c.b ENSGT01100000263512.a.a.a.a ENSGT00550000075160 ENSGT00510000047733 #22 ENSGT01030000235147 ENSGT00950000183026.A.a.a.a ENSGT00390000017153.a ENSGT00940000168334 ENSGT00940000155777.a ENSGT00390000000080.a.a ENSGT00940000153716.B ENSGT00950000183079.A.b.c.a.b ENSGT00940000158380.a ENSGT00730000111282.a ENSGT00940000165786 ENSGT00390000010512 ENSGT00510000047104 ENSGT00390000016655.a.b ENSGT00940000155266 Clown anemonefish MODERN SPECIES 1022 POU3F4 (ENSAOCG00000018791) ENSAOCG00000018771 ENSAOCG00000018757 sh3bgrl (ENSAOCG00000018709) hmgn6 (ENSAOCG00000018698) ENSAOCG00000018681 ENSAOCG00000018654 TBX22 (ENSAOCG00000018641) ITM2A (ENSAOCG00000018621) ENSAOCG00000018611 p2ry10 (ENSAOCG00000018571) LPAR4 (ENSAOCG00000018558) cysltr1 (ENSAOCG00000018538) ENSAOCG00000018528 polr1d (ENSAOCG00000018500) sybl1 (ENSAOCG00000018485) #22 ENSAOCG00000018447 pdgfrl (ENSAOCG00000018421) slc7a2 (ENSAOCG00000018408) mtmr7a (ENSAOCG00000018359) cnot7 (ENSAOCG00000018300) zdhhc2 (ENSAOCG00000018272) ENSAOCG00000018238 Orange clownfish MODERN SPECIES 4 POU3F4 (ENSAPEG00000009761) ENSAPEG00000009751 ENSAPEG00000009705 sh3bgrl (ENSAPEG00000009698) hmgn6 (ENSAPEG00000009677) TENT5D (ENSAPEG00000009667) ENSAPEG00000009630 TBX22 (ENSAPEG00000009606) ITM2A (ENSAPEG00000009597) ENSAPEG00000009578 p2ry10 (ENSAPEG00000009570) LPAR4 (ENSAPEG00000009564) cysltr1 (ENSAPEG00000009556) ENSAPEG00000009520 polr1d (ENSAPEG00000009489) sybl1 (ENSAPEG00000009468) #22 ENSAPEG00000009454 ENSAPEG00000009429 pdgfrl (ENSAPEG00000009417) slc7a2 (ENSAPEG00000009377) mtmr7a (ENSAPEG00000009307) cnot7 (ENSAPEG00000009270) zdhhc2 (ENSAPEG00000009211) ENSAPEG00000009182 MICU3 (ENSAPEG00000009168) fgf20b (ENSAPEG00000009149) her11 (ENSAPEG00000009124) her5 (ENSAPEG00000009111) pfdn6 (ENSAPEG00000009090) mmgt1 (ENSAPEG00000009068) ints6l (ENSAPEG00000008998) Spiny chromis MODERN SPECIES 1242 cysltr1 (ENSAPOG00000001000) ENSAPOG00000021904 polr1d (ENSAPOG00000021882) sybl1 (ENSAPOG00000021841) #22 ENSAPOG00000021791 pdgfrl (ENSAPOG00000021748) slc7a2 (ENSAPOG00000021715) mtmr7a (ENSAPOG00000021681) ENSAPOG00000021633 Bicolor damselfish MODERN SPECIES 1216 TBX22 (ENSSPAG00000011619) ITM2A (ENSSPAG00000011655) ENSSPAG00000011668 p2ry10 (ENSSPAG00000011682) LPAR4 (ENSSPAG00000011722) cysltr1 (ENSSPAG00000011732) ENSSPAG00000011735 polr1d (ENSSPAG00000011764) sybl1 (ENSSPAG00000011788) #22 ENSSPAG00000011826 pdgfrl (ENSSPAG00000011883) ENSSPAG00000011891 slc7a2 (ENSSPAG00000011903) mtmr7a (ENSSPAG00000011947) cnot7 (ENSSPAG00000012006) Cichlidae ANCESTRAL SPECIES 8 ENSGT00940000161429 ENSGT00390000017581.a ENSGT00940000164351 ENSGT00940000156017.eb ENSGT00950000182802.D ENSGT00940000162488.b.b ENSGT00940000161206 ENSGT00950000183115.b.b ENSGT01100000263536.A.a.b ENSGT01100000263536.A.a.a ENSGT01040000240444.A.a.a.a.b ENSGT01030000235435 ENSGT01100000263536.B.c.b ENSGT01100000263512.a.a.a.a ENSGT00550000075160 ENSGT00510000047733 #22 ENSGT01030000235147 ENSGT00950000183026.A.a.a.a ENSGT00390000017153.a ENSGT00940000168334 ENSGT00940000155777.a ENSGT00390000000080.a.a ENSGT00940000153716.B ENSGT00950000183079.A.b.c.a.b ENSGT00940000158380.a ENSGT00730000111282.a ENSGT00940000165786 ENSGT00390000010512 ENSGT00510000047104 ENSGT00390000016655.a.b ENSGT00940000155266 Pseudocrenilabrinae ANCESTRAL SPECIES 17 ENSGT00940000161429 ENSGT00390000017581.a ENSGT00940000164351 ENSGT00940000156017.eb ENSGT00950000182802.D ENSGT00940000162488.b.b ENSGT00940000161206 ENSGT00950000183115.b.b ENSGT01100000263536.A.a.b ENSGT01100000263536.A.a.a ENSGT01040000240444.A.a.a.a.b ENSGT01030000235435 ENSGT01100000263536.B.c.b ENSGT01100000263512.a.a.a.a ENSGT00550000075160 ENSGT00510000047733 #22 ENSGT01030000235147 ENSGT00950000183026.A.a.a.a ENSGT00390000017153.a ENSGT00940000168334 ENSGT00940000155777.a ENSGT00390000000080.a.a ENSGT00940000153716.B ENSGT00950000183079.A.b.c.a.b ENSGT00940000158380.a ENSGT00730000111282.a ENSGT00940000165786 ENSGT00390000010512 ENSGT00510000047104 ENSGT00390000016655.a.b ENSGT00940000155266 Pseudocrenilabrinae_A ANCESTRAL SPECIES 20 ENSGT00940000159242 ENSGT00940000161429 ENSGT00390000017581.a ENSGT00940000164351 ENSGT00940000156017.eb ENSGT00950000182802.D ENSGT00940000162488.b.b ENSGT00950000183115.b.b ENSGT01100000263536.A.a.b ENSGT01100000263536.A.a.a ENSGT01040000240444.A.a.a.a.b ENSGT01030000235435 ENSGT01100000263536.B.c.b ENSGT01100000263512.a.a.a.a ENSGT00550000075160 ENSGT00510000047733 #22 ENSGT01030000235147 ENSGT00950000183026.A.a.a.a ENSGT00390000017153.a ENSGT00940000168334 ENSGT00940000155777.a ENSGT00390000000080.a.a ENSGT00940000153716.B ENSGT00950000183079.A.b.c.a.b ENSGT00940000158380.a ENSGT00730000111282.a ENSGT00940000165786 ENSGT00390000010512 ENSGT00510000047104 ENSGT00390000016655.a.b ENSGT00940000155266 Haplochromini ANCESTRAL SPECIES 14 ENSGT00940000159242 ENSGT00940000161429 ENSGT00390000017581.a ENSGT00940000164351 ENSGT00940000156017.eb ENSGT00950000182802.D ENSGT00940000162488.b.b ENSGT00940000161206 ENSGT00950000183115.b.b ENSGT01100000263536.A.a.b ENSGT01100000263536.A.a.a ENSGT01040000240444.A.a.a.a.b ENSGT01100000263536.B.c.b ENSGT01100000263512.a.a.a.a ENSGT00550000075160 ENSGT00510000047733 #22 ENSGT01030000235147 ENSGT00950000183026.A.a.a.a ENSGT00390000017153.a ENSGT00940000168334 ENSGT00940000155777.a ENSGT00390000000080.a.a ENSGT00940000153716.B ENSGT00950000183079.A.b.c.a.b ENSGT00940000158380.a ENSGT00730000111282.a ENSGT00940000165786 ENSGT00390000010512 ENSGT00510000047104 ENSGT00390000016655.a.b ENSGT00940000155266 Haplochromini_A ANCESTRAL SPECIES 13 ENSGT00390000008591 ENSGT00940000159242 ENSGT00940000161429 ENSGT00390000017581.a ENSGT00940000164351 ENSGT00940000156017.eb ENSGT00950000182802.D ENSGT00940000162488.b.b ENSGT00950000183115.b.b ENSGT01100000263536.A.a.b ENSGT01100000263536.A.a.a ENSGT01040000240444.A.a.a.a.b ENSGT01100000263536.B.c.b ENSGT01100000263512.a.a.a.a ENSGT00550000075160 ENSGT00510000047733 #22 ENSGT01030000235147 ENSGT00950000183026.A.a.a.a ENSGT00390000017153.a ENSGT00940000168334 ENSGT00940000155777.a ENSGT00390000000080.a.a ENSGT00940000153716.B ENSGT00950000183079.A.b.c.a.b ENSGT00940000158380.a ENSGT00730000111282.a ENSGT00940000165786 ENSGT00390000010512 ENSGT00510000047104 ENSGT00390000016655.a.b ENSGT00940000155266 Haplochromini_B ANCESTRAL SPECIES 7 ENSGT00940000159242 ENSGT00940000161429 ENSGT00390000017581.a ENSGT00940000164351 ENSGT00940000156017.eb ENSGT00950000182802.D ENSGT00940000162488.b.b ENSGT00940000161206 ENSGT00950000183115.b.b ENSGT01100000263536.A.a.b ENSGT01100000263536.A.a.a ENSGT01040000240444.A.a.a.a.b ENSGT01100000263536.B.c.b ENSGT01100000263512.a.a.a.a ENSGT00550000075160 ENSGT00510000047733 #22 ENSGT01030000235147 ENSGT00950000183026.A.a.a.a ENSGT00390000017153.a ENSGT00940000168334 ENSGT00940000155777.a ENSGT00390000000080.a.a ENSGT00940000153716.B ENSGT00950000183079.A.b.c.a.b ENSGT00940000158380.a ENSGT00730000111282.a ENSGT00940000165786 ENSGT00390000010512 ENSGT00510000047104 ENSGT00390000016655.a.b ENSGT00940000155266 Eastern happy MODERN SPECIES 11 ENSACLG00000024021 ENSACLG00000024014 sh3bgrl (ENSACLG00000023996) hmgn6 (ENSACLG00000023964) ENSACLG00000023943 ENSACLG00000023910 tbx22 (ENSACLG00000023898) ITM2A (ENSACLG00000023891) ENSACLG00000023881 p2ry10 (ENSACLG00000023872) LPAR4 (ENSACLG00000023865) cysltr1 (ENSACLG00000023862) ENSACLG00000023840 ENSACLG00000023834 polr1d (ENSACLG00000023805) sybl1 (ENSACLG00000023763) #22 ENSACLG00000023716 pdgfrl (ENSACLG00000023689) slc7a2 (ENSACLG00000023618) mtmr7a (ENSACLG00000023534) cnot7 (ENSACLG00000023518) zdhhc2 (ENSACLG00000023441) MICU3 (ENSACLG00000023434) fgf20b (ENSACLG00000023421) her11 (ENSACLG00000023368) her5 (ENSACLG00000023360) pfdn6 (ENSACLG00000023348) mmgt1 (ENSACLG00000023332) ints6l (ENSACLG00000023288) mospd1 (ENSACLG00000023279) pabir2 (ENSACLG00000023255) Zebra mbuna MODERN SPECIES 1102 POU3F4 (ENSMZEG00005006874) ENSMZEG00005006859 ENSMZEG00005006824 sh3bgrl (ENSMZEG00005006795) hmgn6 (ENSMZEG00005006773) TENT5D (ENSMZEG00005006756) ENSMZEG00005006729 TBX22 (ENSMZEG00005006713) ITM2A (ENSMZEG00005006703) ENSMZEG00005006693 p2ry10 (ENSMZEG00005006685) LPAR4 (ENSMZEG00005006677) cysltr1 (ENSMZEG00005006664) ENSMZEG00005006645 polr1d (ENSMZEG00005006638) sybl1 (ENSMZEG00005006615) #22 ENSMZEG00005006603 ENSMZEG00005006587 pdgfrl (ENSMZEG00005006572) slc7a2 (ENSMZEG00005006530) mtmr7a (ENSMZEG00005006489) cnot7 (ENSMZEG00005006467) zdhhc2 (ENSMZEG00005006415) MICU3 (ENSMZEG00005006384) fgf20b (ENSMZEG00005006373) her11 (ENSMZEG00005006360) her5 (ENSMZEG00005006352) pfdn6 (ENSMZEG00005006341) mmgt1 (ENSMZEG00005006324) ints6l (ENSMZEG00005006291) mospd1 (ENSMZEG00005006269) P. nyererei MODERN SPECIES 296 ENSPNYG00000000121 ENSPNYG00000000120 ENSPNYG00000000119 sh3bgrl (ENSPNYG00000000118) hmgn6 (ENSPNYG00000000117) TENT5D (ENSPNYG00000000116) ENSPNYG00000000115 TBX22 (ENSPNYG00000000114) ITM2A (ENSPNYG00000000113) ENSPNYG00000000112 p2ry10 (ENSPNYG00000000111) LPAR4 (ENSPNYG00000000110) cysltr1 (ENSPNYG00000000109) ENSPNYG00000000108 polr1d (ENSPNYG00000000107) sybl1 (ENSPNYG00000000106) #22 ENSPNYG00000000105 ENSPNYG00000000104 pdgfrl (ENSPNYG00000000103) slc7a2 (ENSPNYG00000000102) mtmr7a (ENSPNYG00000000101) cnot7 (ENSPNYG00000000100) zdhhc2 (ENSPNYG00000000099) MICU3 (ENSPNYG00000000098) fgf20b (ENSPNYG00000000097) her11 (ENSPNYG00000000096) her5 (ENSPNYG00000000095) pfdn6 (ENSPNYG00000000094) mmgt1 (ENSPNYG00000000093) ints6l (ENSPNYG00000000092) mospd1 (ENSPNYG00000000091) Burton s mouthbrooder MODERN SPECIES 284 ENSHBUG00000002258 ENSHBUG00000002248 sh3bgrl (ENSHBUG00000002233) hmgn6 (ENSHBUG00000002215) ENSHBUG00000002204 ENSHBUG00000002195 tbx22 (ENSHBUG00000002184) ENSHBUG00000002178 ITM2A (ENSHBUG00000002166) ENSHBUG00000002158 p2ry10 (ENSHBUG00000002152) LPAR4 (ENSHBUG00000002149) cysltr1 (ENSHBUG00000000029) ENSHBUG00000002135 polr1d (ENSHBUG00000002111) sybl1 (ENSHBUG00000002095) #22 ENSHBUG00000002073 pdgfrl (ENSHBUG00000002049) slc7a2 (ENSHBUG00000002035) mtmr7a (ENSHBUG00000001980) cnot7 (ENSHBUG00000001954) zdhhc2 (ENSHBUG00000001934) MICU3 (ENSHBUG00000001905) fgf20b (ENSHBUG00000001893) her11 (ENSHBUG00000001888) her5 (ENSHBUG00000001885) pfdn6 (ENSHBUG00000000828) mmgt1 (ENSHBUG00000001870) ints6l (ENSHBUG00000001856) mospd1 (ENSHBUG00000001838) pabir2 (ENSHBUG00000001823) Lyretail cichlid MODERN SPECIES 292 ENSNBRG00000020045 sh3bgrl (ENSNBRG00000020063) hmgn6 (ENSNBRG00000020077) TENT5D (ENSNBRG00000020090) ENSNBRG00000020099 TBX22 (ENSNBRG00000020119) ITM2A (ENSNBRG00000020161) ENSNBRG00000020189 p2ry10 (ENSNBRG00000020247) LPAR4 (ENSNBRG00000020270) ENSNBRG00000020280 cysltr1 (ENSNBRG00000020287) ENSNBRG00000020294 ENSNBRG00000020315 polr1d (ENSNBRG00000020327) sybl1 (ENSNBRG00000020346) #22 ENSNBRG00000020365 mtus1a (ENSNBRG00000020382) pdgfrl (ENSNBRG00000020416) slc7a2 (ENSNBRG00000020438) mtmr7a (ENSNBRG00000020460) cnot7 (ENSNBRG00000020488) zdhhc2 (ENSNBRG00000020515) MICU3 (ENSNBRG00000020556) fgf20b (ENSNBRG00000020602) her11 (ENSNBRG00000020715) her5 (ENSNBRG00000020736) pfdn6 (ENSNBRG00000020755) mmgt1 (ENSNBRG00000020777) ints6l (ENSNBRG00000020805) ENSNBRG00000020911 Nile tilapia MODERN SPECIES 11 rps6kal (ENSONIG00000017654) POU3F4 (ENSONIG00000020587) ENSONIG00000029870 ENSONIG00000017649 sh3bgrl (ENSONIG00000038170) ENSONIG00000035195 ENSONIG00000017644 tbx22 (ENSONIG00000017642) ITM2A (ENSONIG00000017637) ENSONIG00000017636 p2ry10 (ENSONIG00000042965) LPAR4 (ENSONIG00000017634) cysltr1 (ENSONIG00000020586) ENSONIG00000017631 polr1d (ENSONIG00000035873) sybl1 (ENSONIG00000017628) #22 ENSONIG00000017626 pdgfrl (ENSONIG00000017621) slc7a2 (ENSONIG00000017619) mtmr7a (ENSONIG00000017613) cnot7 (ENSONIG00000033024) zdhhc2 (ENSONIG00000017607) MICU3 (ENSONIG00000017605) fgf20b (ENSONIG00000017603) her11 (ENSONIG00000017602) her5 (ENSONIG00000017601) pfdn6 (ENSONIG00000017598) mmgt1 (ENSONIG00000032087) ints6l (ENSONIG00000017592) mospd1 (ENSONIG00000017590) pabir2 (ENSONIG00000031262) Percomorphaceae_C ANCESTRAL SPECIES 16 ENSGT00940000164351 ENSGT00770000121762 ENSGT00940000156017.eb ENSGT00950000182802.D ENSGT00940000162488.b.b ENSGT00940000166733 ENSGT00940000161206 ENSGT00950000183115.b.b ENSGT01100000263536.A.a.b ENSGT01100000263536.A.a.a ENSGT01040000240444.A.a.a.a.b ENSGT01030000235435 ENSGT01100000263536.B.c.b ENSGT01100000263512.a.a.a.a ENSGT00550000075160 ENSGT00510000047733 #22 ENSGT01030000235147 ENSGT00950000183026.A.a.a.a ENSGT01060000249241 ENSGT00390000017153.a ENSGT00940000168334 ENSGT00940000155777.a ENSGT00390000000080.a.a ENSGT00940000153716.B ENSGT00950000183079.A.b.c.a.b ENSGT00940000158380.a ENSGT00730000111282.a ENSGT00940000165786 ENSGT00390000010512 ENSGT00510000047104 ENSGT00390000016655.a.b Eupercaria ANCESTRAL SPECIES 12 ENSGT00940000164351 ENSGT00770000121762 ENSGT00940000156017.eb ENSGT00950000182802.D ENSGT00940000162488.b.b ENSGT00940000166733 ENSGT00940000161206 ENSGT00950000183115.b.b ENSGT01100000263536.A.a.b ENSGT01100000263536.A.a.a ENSGT01040000240444.A.a.a.a.b ENSGT01030000235435 ENSGT01100000263536.B.c.b ENSGT01100000263512.a.a.a.a ENSGT00550000075160 ENSGT00510000047733 #22 ENSGT00950000183026.A.a.a.a ENSGT01060000249241 ENSGT00390000017153.a ENSGT00940000168334 ENSGT00940000155777.a ENSGT00390000000080.a.a ENSGT00940000153716.B ENSGT00950000183079.A.b.c.a.b ENSGT00940000158380.a ENSGT00730000111282.a ENSGT00940000165786 ENSGT00390000010512 ENSGT00510000047104 ENSGT00390000016655.a.b ENSGT00940000155266 Tetraodontidae ANCESTRAL SPECIES 9 ENSGT00940000160111 ENSGT00940000157196 ENSGT00390000017581.a ENSGT00940000164351 ENSGT00940000156017.eb ENSGT00940000162488.b.b ENSGT00940000161206 ENSGT00950000183115.b.b ENSGT01100000263536.A.a.b ENSGT01100000263536.A.a.a ENSGT01040000240444.A.a.a.a.b ENSGT01030000234518.C.b ENSGT01100000263536.B.c.b ENSGT01100000263512.a.a.a.a ENSGT00550000075160 ENSGT00510000047733 #22 ENSGT00950000183026.A.a.a.a ENSGT00390000017153.a ENSGT00940000168334 ENSGT00940000155777.a ENSGT00940000157266.b ENSGT00550000074940 ENSGT00910000144269 ENSGT00550000074935 ENSGT00390000016110 ENSGT00940000164681 ENSGT00390000011180 ENSGT00940000158778.d ENSGT00950000183162.a.a.d ENSGT00940000159674 ENSGT00940000157357.e.b Fugu MODERN SPECIES 5 SASH3 (ENSTRUG00000011295) xpnpep2 (ENSTRUG00000010975) ENSTRUG00000022912 ENSTRUG00000010915 sh3bgrl (ENSTRUG00000010907) ENSTRUG00000032141 tbx22 (ENSTRUG00000010801) ITM2A (ENSTRUG00000010658) ENSTRUG00000010585 p2ry10 (ENSTRUG00000024015) LPAR4 (ENSTRUG00000010206) ENSTRUG00000028862 cysltr1 (ENSTRUG00000010151) ENSTRUG00000009684 polr1d (ENSTRUG00000019741) sybl1 (ENSTRUG00000024278) #22 ENSTRUG00000023953 pdgfrl (ENSTRUG00000009439) slc7a2 (ENSTRUG00000008679) mtmr7a (ENSTRUG00000008364) GABRA2 (ENSTRUG00000008037) GUF1 (ENSTRUG00000007961) PIGG (ENSTRUG00000007856) fnta (ENSTRUG00000007691) ENSTRUG00000007653 aup1 (ENSTRUG00000007392) ctsf (ENSTRUG00000007295) eif1ad (ENSTRUG00000031002) nrg2b (ENSTRUG00000006829) PURA (ENSTRUG00000006789) PSD2 (ENSTRUG00000006675) Tetraodon MODERN SPECIES ENSTNIG00000016861 mid1ip1l (ENSTNIG00000016862) tspan7 (ENSTNIG00000016863) SRPX2 (ENSTNIG00000016864) sytl4 (ENSTNIG00000016865) trmt12 (ENSTNIG00000016866) zdhhc9 (ENSTNIG00000016867) ENSTNIG00000016868 TENT5D (ENSTNIG00000016869) TBX22 (ENSTNIG00000016870) ITM2A (ENSTNIG00000016871) ENSTNIG00000019684 LPAR4 (ENSTNIG00000002953) ENSTNIG00000002954 ENSTNIG00000002955 sybl1 (ENSTNIG00000004212) #22 mtus1a (ENSTNIG00000004213) pdgfrl (ENSTNIG00000004214) slc7a2 (ENSTNIG00000004215) mtmr7a (ENSTNIG00000004216) GABRA2 (ENSTNIG00000004217) GUF1 (ENSTNIG00000004218) ENSTNIG00000001492 ENSTNIG00000006076 PIGG (ENSTNIG00000006077) ENSTNIG00000000283 fnta (ENSTNIG00000006078) aup1 (ENSTNIG00000006079) eif1ad (ENSTNIG00000001342) nrg2b (ENSTNIG00000004640) PURA (ENSTNIG00000004639) Eupecaria_A ANCESTRAL SPECIES 13 ENSGT00940000164351 ENSGT00770000121762 ENSGT00940000156017.eb ENSGT00950000182802.D ENSGT00940000162488.b.b ENSGT00940000166733 ENSGT00940000161206 ENSGT00950000183115.b.b ENSGT01100000263536.A.a.b ENSGT01100000263536.A.a.a ENSGT01040000240444.A.a.a.a.b ENSGT01030000235435 ENSGT01100000263536.B.c.b ENSGT01100000263512.a.a.a.a ENSGT00550000075160 ENSGT00510000047733 #22 ENSGT00950000183026.A.a.a.a ENSGT01060000249241 ENSGT00390000017153.a ENSGT00940000168334 ENSGT00940000155777.a ENSGT00390000000080.a.a ENSGT00940000153716.B ENSGT00950000183079.A.b.c.a.b ENSGT00940000158380.a ENSGT00730000111282.a ENSGT00940000165786 ENSGT00390000010512 ENSGT00510000047104 ENSGT00390000016655.a.b ENSGT00940000155266 Eupecaria_B ANCESTRAL SPECIES 13 ENSGT00940000161429 ENSGT00390000017581.a ENSGT00940000164351 ENSGT00940000156017.eb ENSGT00940000162488.b.b ENSGT00940000166733 ENSGT00940000161206 ENSGT00950000183115.b.b ENSGT01100000263536.A.a.b ENSGT01100000263536.A.a.a ENSGT01040000240444.A.a.a.a.b ENSGT01030000235435 ENSGT01100000263536.B.c.b ENSGT01100000263512.a.a.a.a ENSGT00550000075160 ENSGT00510000047733 #22 ENSGT00950000183026.A.a.a.a ENSGT01060000249241 ENSGT00390000017153.a ENSGT00940000168334 ENSGT00940000155777.a ENSGT00390000000080.a.a ENSGT00940000153716.B ENSGT00950000183079.A.b.c.a.b ENSGT00940000158380.a ENSGT00730000111282.a ENSGT00940000165786 ENSGT00390000010512 ENSGT00510000047104 ENSGT00390000016655.a.b ENSGT00940000155266 Eupecaria_C ANCESTRAL SPECIES 12 ENSGT00940000161429 ENSGT00390000017581.a ENSGT00940000164351 ENSGT00940000156017.eb ENSGT00940000162488.b.b ENSGT00950000182832.D.b ENSGT00940000161206 ENSGT00950000183115.b.b ENSGT01100000263536.A.a.b ENSGT01100000263536.A.a.a ENSGT01040000240444.A.a.a.a.b ENSGT01030000235435 ENSGT01100000263536.B.c.b ENSGT01100000263512.a.a.a.a ENSGT00550000075160 ENSGT00510000047733 #22 ENSGT00950000183026.A.a.a.a ENSGT01060000249241 ENSGT00390000017153.a ENSGT00940000168334 ENSGT00940000155777.a ENSGT00390000000080.a.a ENSGT00940000153716.B ENSGT00950000183079.A.b.c.a.b ENSGT00940000158380.a ENSGT00730000111282.a ENSGT00940000165786 ENSGT00390000010512 ENSGT00510000047104 ENSGT00390000016655.a.b ENSGT00940000155266 Gilthead seabream MODERN SPECIES 9 rps6kal (ENSSAUG00010019152) POU3F4 (ENSSAUG00010019001) ENSSAUG00010019000 ENSSAUG00010018773 sh3bgrl (ENSSAUG00010018763) ENSSAUG00010018762 ENSSAUG00010018760 TBX22 (ENSSAUG00010018759) ITM2A (ENSSAUG00010018757) ENSSAUG00010018754 p2ry10 (ENSSAUG00010018753) LPAR4 (ENSSAUG00010018748) cysltr1 (ENSSAUG00010018747) ENSSAUG00010018742 polr1d (ENSSAUG00010018738) sybl1 (ENSSAUG00010018734) #22 brd8b (ENSSAUG00010018732) gpc4 (ENSSAUG00010018716) gpc3 (ENSSAUG00010018706) cab39l1 (ENSSAUG00010018698) phf6 (ENSSAUG00010018696) hprt1 (ENSSAUG00010018667) pabir2 (ENSSAUG00010018629) mospd1 (ENSSAUG00010018620) ints6l (ENSSAUG00010015516) ENSSAUG00010015461 pfdn6 (ENSSAUG00010015460) her5 (ENSSAUG00010015459) her11 (ENSSAUG00010015456) fgf20b (ENSSAUG00010015452) MICU3 (ENSSAUG00010015447) Eupercaria_incertae_sedis ANCESTRAL SPECIES 14 ENSGT00390000017581.a ENSGT00940000164351 ENSGT00940000156017.eb ENSGT00990000211426 ENSGT00940000162488.b.b ENSGT00950000182832.D.b ENSGT00940000161206 ENSGT00950000183115.b.b ENSGT01100000263536.A.a.b ENSGT01100000263536.A.a.a ENSGT01040000240444.A.a.a.a.b ENSGT01030000235435 ENSGT01100000263536.B.c.b ENSGT01100000263512.a.a.a.a ENSGT00550000075160 ENSGT00510000047733 #22 ENSGT00950000183026.A.a.a.a ENSGT01060000249241 ENSGT00390000017153.a ENSGT00940000168334 ENSGT00940000155777.a ENSGT00390000000080.a.a ENSGT00940000153716.B ENSGT00950000183079.A.b.c.a.b ENSGT00940000158380.a ENSGT00730000111282.a ENSGT00940000165786 ENSGT00390000010512 ENSGT00510000047104 ENSGT00390000016655.a.b ENSGT00940000155266 Large yellow croaker MODERN SPECIES ENSLCRG00005018221 ENSLCRG00005018227 sh3bgrl (ENSLCRG00005018356) ENSLCRG00005018357 ENSLCRG00005018362 ENSLCRG00005018364 TBX22 (ENSLCRG00005018365) ITM2A (ENSLCRG00005018366) ENSLCRG00005018367 p2ry10 (ENSLCRG00005018376) LPAR4 (ENSLCRG00005018378) ENSLCRG00005018379 cysltr1 (ENSLCRG00005018381) ENSLCRG00005018383 polr1d (ENSLCRG00005018385) sybl1 (ENSLCRG00005018387) #22 MTUS1 (ENSLCRG00005018390) ENSLCRG00005018392 pdgfrl (ENSLCRG00005018393) slc7a2 (ENSLCRG00005018394) mtmr7a (ENSLCRG00005018439) cnot7 (ENSLCRG00005018556) zdhhc2 (ENSLCRG00005018565) MICU3 (ENSLCRG00005018690) fgf20b (ENSLCRG00005018693) her11 (ENSLCRG00005018695) her5 (ENSLCRG00005018696) pfdn6 (ENSLCRG00005018697) mmgt1 (ENSLCRG00005018698) ints6l (ENSLCRG00005018703) mospd1 (ENSLCRG00005019305) Perciformes ANCESTRAL SPECIES 13 ENSGT00940000161429 ENSGT00390000017581.a ENSGT00940000164351 ENSGT00940000156017.eb ENSGT00940000162488.b.b ENSGT00940000166733 ENSGT00940000161206 ENSGT00950000183115.b.b ENSGT01100000263536.A.a.b ENSGT01100000263536.A.a.a ENSGT01040000240444.A.a.a.a.b ENSGT01030000235435 ENSGT01100000263536.B.c.b ENSGT01100000263512.a.a.a.a ENSGT00550000075160 ENSGT00510000047733 #22 ENSGT00950000183026.A.a.a.a ENSGT01060000249241 ENSGT00390000017153.a ENSGT00940000168334 ENSGT00940000155777.a ENSGT00390000000080.a.a ENSGT00940000153716.B ENSGT00950000183079.A.b.c.a.b ENSGT00940000158380.a ENSGT00730000111282.a ENSGT00940000165786 ENSGT00390000010512 ENSGT00510000047104 ENSGT00390000016655.a.b ENSGT00940000155266 Cottioidei ANCESTRAL SPECIES 9 ENSGT00390000008591 ENSGT00940000159242 ENSGT00940000161429 ENSGT00390000017581.a ENSGT00940000164351 ENSGT00940000156017.eb ENSGT00940000162488.b.b ENSGT00940000161206 ENSGT00950000183115.b.b ENSGT01100000263536.A.a.b ENSGT01100000263536.A.a.a ENSGT01040000240444.A.a.a.a.b ENSGT01100000263536.B.c.b ENSGT01100000263512.a.a.a.a ENSGT00550000075160 ENSGT00510000047733 #22 ENSGT00950000183026.A.a.a.a ENSGT00390000017153.a ENSGT00940000168334 ENSGT00940000155777.a ENSGT00390000000080.a.a ENSGT00940000153716.B ENSGT00950000183079.A.b.c.a.b ENSGT00940000158380.a ENSGT00730000111282.a ENSGT00940000165786 ENSGT00390000010512 ENSGT00510000047104 ENSGT00390000016655.a.b ENSGT00940000155266 ENSGT00390000015476 Stickleback MODERN SPECIES 3 rps6kal (ENSGACG00000018545) POU3F4 (ENSGACG00000018547) ENSGACG00000018548 ENSGACG00000018550 sh3bgrl (ENSGACG00000018552) ENSGACG00000018556 TENT5D (ENSGACG00000018558) ITM2A (ENSGACG00000018559) ENSGACG00000018571 p2ry10 (ENSGACG00000018572) LPAR4 (ENSGACG00000018574) ENSGACG00000018578 cysltr1 (ENSGACG00000018579) ENSGACG00000018580 polr1d (ENSGACG00000018585) sybl1 (ENSGACG00000018587) #22 mtus1a (ENSGACG00000018595) pdgfrl (ENSGACG00000018598) slc7a2 (ENSGACG00000018601) mtmr7a (ENSGACG00000018602) cnot7 (ENSGACG00000018605) zdhhc2 (ENSGACG00000018608) MICU3 (ENSGACG00000018610) fgf20b (ENSGACG00000018613) her11 (ENSGACG00000018614) her5 (ENSGACG00000018615) pfdn6 (ENSGACG00000018616) mmgt1 (ENSGACG00000018620) ints6l (ENSGACG00000018623) mospd1 (ENSGACG00000018626) pabir2 (ENSGACG00000018631) Lumpfish MODERN SPECIES 1 POU3F4 (ENSCLMG00005000992) ENSCLMG00005000986 ENSCLMG00005000985 sh3bgrl (ENSCLMG00005000981) ENSCLMG00005000978 ENSCLMG00005000974 TBX22 (ENSCLMG00005000966) ITM2A (ENSCLMG00005000962) ENSCLMG00005000958 p2ry10 (ENSCLMG00005000957) LPAR4 (ENSCLMG00005000955) cysltr1 (ENSCLMG00005000952) KLHL10 (ENSCLMG00005000949) ENSCLMG00005000946 polr1d (ENSCLMG00005000938) sybl1 (ENSCLMG00005000935) #22 ENSCLMG00005000932 pdgfrl (ENSCLMG00005000930) slc7a2 (ENSCLMG00005000887) mtmr7a (ENSCLMG00005000860) cnot7 (ENSCLMG00005000845) zdhhc2 (ENSCLMG00005000839) MICU3 (ENSCLMG00005000834) fgf20b (ENSCLMG00005000831) her11 (ENSCLMG00005000829) her5 (ENSCLMG00005000827) pfdn6 (ENSCLMG00005000824) mmgt1 (ENSCLMG00005000822) ints6l (ENSCLMG00005000817) mospd1 (ENSCLMG00005000814) pabir2 (ENSCLMG00005000811) Perciformes_a ANCESTRAL SPECIES 11 ENSGT00940000161429 ENSGT00390000017581.a ENSGT00940000164351 ENSGT00940000156017.eb ENSGT00940000162488.b.b ENSGT00940000166733 ENSGT00940000161206 ENSGT00950000183115.b.b ENSGT01100000263536.A.a.b ENSGT01100000263536.A.a.a ENSGT01040000240444.A.a.a.a.b ENSGT01030000235435 ENSGT01100000263536.B.c.b ENSGT01100000263512.a.a.a.a ENSGT00550000075160 ENSGT00510000047733 #22 ENSGT00950000183026.A.a.a.a ENSGT01060000249241 ENSGT00390000017153.a ENSGT00940000168334 ENSGT00940000155777.a ENSGT00390000000080.a.a ENSGT00940000153716.B ENSGT00950000183079.A.b.c.a.b ENSGT00940000158380.a ENSGT00730000111282.a ENSGT00940000165786 ENSGT00390000010512 ENSGT00510000047104 ENSGT00390000016655.a.b ENSGT00940000155266 Channel bull blenny MODERN SPECIES 1 POU3F4 (ENSCGOG00000024606) ENSCGOG00000024607 ENSCGOG00000004075 sh3bgrl (ENSCGOG00000004120) ENSCGOG00000004156 ENSCGOG00000004160 TBX22 (ENSCGOG00000004171) ITM2A (ENSCGOG00000004199) ENSCGOG00000004202 p2ry10 (ENSCGOG00000004205) LPAR4 (ENSCGOG00000004209) ENSCGOG00000004214 cysltr1 (ENSCGOG00000004220) ENSCGOG00000004233 polr1d (ENSCGOG00000004530) sybl1 (ENSCGOG00000004539) #22 ENSCGOG00000004596 pdgfrl (ENSCGOG00000004607) slc7a2 (ENSCGOG00000004631) mtmr7a (ENSCGOG00000004973) cnot7 (ENSCGOG00000005616) zdhhc2 (ENSCGOG00000005623) MICU3 (ENSCGOG00000005827) fgf20b (ENSCGOG00000005830) her11 (ENSCGOG00000005834) her5 (ENSCGOG00000005835) pfdn6 (ENSCGOG00000005838) mmgt1 (ENSCGOG00000005847) ints6l (ENSCGOG00000005910) mospd1 (ENSCGOG00000007026) pabir2 (ENSCGOG00000007050) Pike perch MODERN SPECIES 52 ENSSLUG00000025572 ENSSLUG00000025573 ENSSLUG00000025575 sh3bgrl (ENSSLUG00000025576) ENSSLUG00000025579 ENSSLUG00000025585 TBX22 (ENSSLUG00000025589) ITM2A (ENSSLUG00000025592) ENSSLUG00000025594 p2ry10 (ENSSLUG00000025597) LPAR4 (ENSSLUG00000025598) ENSSLUG00000025601 cysltr1 (ENSSLUG00000025606) ENSSLUG00000025612 polr1d (ENSSLUG00000025619) sybl1 (ENSSLUG00000025622) #22 ENSSLUG00000025629 ENSSLUG00000025632 pdgfrl (ENSSLUG00000025635) slc7a2 (ENSSLUG00000025640) mtmr7a (ENSSLUG00000025650) cnot7 (ENSSLUG00000025658) zdhhc2 (ENSSLUG00000025662) MICU3 (ENSSLUG00000025669) fgf20b (ENSSLUG00000025673) her11 (ENSSLUG00000025677) her5 (ENSSLUG00000025679) pfdn6 (ENSSLUG00000025682) mmgt1 (ENSSLUG00000025684) ints6l (ENSSLUG00000025714) mospd1 (ENSSLUG00000025748) Ballan wrasse MODERN SPECIES 27 ENSLBEG00000015500 ENSLBEG00000015550 sh3bgrl (ENSLBEG00000015567) hmgn6 (ENSLBEG00000015609) ENSLBEG00000015628 ENSLBEG00000015652 TBX22 (ENSLBEG00000015715) ITM2A (ENSLBEG00000015782) GPR174 (ENSLBEG00000015797) p2ry10 (ENSLBEG00000015813) LPAR4 (ENSLBEG00000015823) ENSLBEG00000015842 cysltr1 (ENSLBEG00000015861) ENSLBEG00000015883 polr1d (ENSLBEG00000015919) sybl1 (ENSLBEG00000015936) #22 ENSLBEG00000015989 ENSLBEG00000016045 ENSLBEG00000016061 pdgfrl (ENSLBEG00000016101) slc7a2 (ENSLBEG00000016206) mtmr7a (ENSLBEG00000016291) cnot7 (ENSLBEG00000016339) zdhhc2 (ENSLBEG00000016354) MICU3 (ENSLBEG00000016412) fgf20b (ENSLBEG00000016457) her11 (ENSLBEG00000016476) her5 (ENSLBEG00000016498) pfdn6 (ENSLBEG00000016513) mmgt1 (ENSLBEG00000016534) ints6l (ENSLBEG00000016586) Percomorphaceae_D ANCESTRAL SPECIES 17 ENSGT00390000017581.a ENSGT00940000164351 ENSGT00940000156017.eb ENSGT00950000182802.D ENSGT00940000162488.b.b ENSGT00950000182832.D.b ENSGT00940000161206 ENSGT00950000183115.b.b ENSGT01100000263536.A.a.b ENSGT01100000263536.A.a.a ENSGT01040000240444.A.a.a.a.b ENSGT01030000235435 ENSGT01100000263536.B.c.b ENSGT01100000263512.a.a.a.a ENSGT00550000075160 ENSGT00510000047733 #22 ENSGT01030000235147 ENSGT00950000183026.A.a.a.a ENSGT01060000249241 ENSGT00390000017153.a ENSGT00940000168334 ENSGT00940000155777.a ENSGT00390000000080.a.a ENSGT00940000153716.B ENSGT00950000183079.A.b.c.a.b ENSGT00940000158380.a ENSGT00730000111282.a ENSGT00940000165786 ENSGT00390000010512 ENSGT00510000047104 ENSGT00390000016655.a.b Anabantaria ANCESTRAL SPECIES 15 ENSGT00940000161429 ENSGT00390000017581.a ENSGT00940000164351 ENSGT00940000156017.eb ENSGT00940000162488.b.b ENSGT00950000182832.D.b ENSGT00940000161206 ENSGT00950000183115.b.b ENSGT01100000263536.A.a.b ENSGT01100000263536.A.a.a ENSGT01040000240444.A.a.a.a.b ENSGT01030000235435 ENSGT01100000263536.B.c.b ENSGT01100000263512.a.a.a.a ENSGT00550000075160 ENSGT00510000047733 #22 ENSGT00940000177791 ENSGT00950000183026.A.a.a.a ENSGT00390000017153.a ENSGT00940000168334 ENSGT00940000155777.a ENSGT00390000000080.a.a ENSGT00940000153716.B ENSGT00950000183079.A.b.c.a.b ENSGT00940000158380.a ENSGT00730000111282.a ENSGT00940000165786 ENSGT00390000010512 ENSGT00510000047104 ENSGT00390000016655.a.b ENSGT00940000155266 Anabantoidei ANCESTRAL SPECIES 11 ENSGT00940000159242 ENSGT00940000161429 ENSGT00390000017581.a ENSGT00940000164351 ENSGT00940000156017.eb ENSGT00940000162488.b.b ENSGT00950000182832.D.b ENSGT00940000161206 ENSGT00950000183115.b.b ENSGT01100000263536.A.a.b ENSGT01100000263536.A.a.a ENSGT01040000240444.A.a.a.a.b ENSGT01100000263536.B.c.b ENSGT01100000263512.a.a.a.a ENSGT00550000075160 ENSGT00510000047733 #22 ENSGT00940000177791 ENSGT00950000183026.A.a.a.a ENSGT00390000017153.a ENSGT00940000168334 ENSGT00940000155777.a ENSGT00390000000080.a.a ENSGT00940000153716.B ENSGT00950000183079.A.b.c.a.b ENSGT00940000158380.a ENSGT00730000111282.a ENSGT00940000165786 ENSGT00390000010512 ENSGT00510000047104 ENSGT00390000016655.a.b ENSGT00940000155266 Climbing perch MODERN SPECIES 1 POU3F4 (ENSATEG00000019531) ENSATEG00000027500 ENSATEG00000019501 SH3BGRL (ENSATEG00000019497) ENSATEG00000027303 ENSATEG00000019471 ENSATEG00000019456 TBX22 (ENSATEG00000019437) ITM2A (ENSATEG00000019420) GPR174 (ENSATEG00000019409) P2RY10 (ENSATEG00000019402) LPAR4 (ENSATEG00000019379) CYSLTR1 (ENSATEG00000019372) ENSATEG00000019351 ENSATEG00000019322 ENSATEG00000019289 #22 ENSATEG00000026711 ENSATEG00000019269 pdgfrl (ENSATEG00000019252) slc7a2 (ENSATEG00000019197) mtmr7a (ENSATEG00000019147) cnot7 (ENSATEG00000019136) zdhhc2 (ENSATEG00000019089) MICU3 (ENSATEG00000019082) fgf20b (ENSATEG00000019056) her11 (ENSATEG00000019043) her5 (ENSATEG00000027385) pfdn6 (ENSATEG00000018997) mmgt1 (ENSATEG00000025621) ints6l (ENSATEG00000018975) mospd1 (ENSATEG00000018965) Siamese fighting fish MODERN SPECIES 1 POU3F4 (ENSBSLG00000011060) ENSBSLG00000011043 ENSBSLG00000010712 ENSBSLG00000010586 ENSBSLG00000010102 ENSBSLG00000010080 TBX22 (ENSBSLG00000010060) ITM2A (ENSBSLG00000010048) ENSBSLG00000010038 p2ry10 (ENSBSLG00000010026) LPAR4 (ENSBSLG00000010006) irgf1 (ENSBSLG00000009986) cysltr1 (ENSBSLG00000009972) ENSBSLG00000009954 polr1d (ENSBSLG00000009941) sybl1 (ENSBSLG00000009903) #22 ENSBSLG00000009876 ENSBSLG00000009859 pdgfrl (ENSBSLG00000009841) slc7a2 (ENSBSLG00000009666) mtmr7a (ENSBSLG00000008812) cnot7 (ENSBSLG00000008789) zdhhc2 (ENSBSLG00000008484) MICU3 (ENSBSLG00000008397) fgf20b (ENSBSLG00000008352) ENSBSLG00000008334 her5 (ENSBSLG00000008321) pfdn6 (ENSBSLG00000008293) mmgt1 (ENSBSLG00000008258) ints6l (ENSBSLG00000016118) mospd1 (ENSBSLG00000016106) Zig-zag eel MODERN SPECIES 1 ENSMAMG00000014380 ENSMAMG00000014395 SH3BGRL (ENSMAMG00000014484) TENT5D (ENSMAMG00000014540) ENSMAMG00000014671 TBX22 (ENSMAMG00000014706) ITM2A (ENSMAMG00000014746) ENSMAMG00000014756 P2RY10 (ENSMAMG00000014768) LPAR4 (ENSMAMG00000014774) ENSMAMG00000014778 CYSLTR1 (ENSMAMG00000014790) ENSMAMG00000026075 ENSMAMG00000014797 ENSMAMG00000014834 ENSMAMG00000014852 #22 ENSMAMG00000014903 ENSMAMG00000014916 ENSMAMG00000027859 gabra4 (ENSMAMG00000014997) ENSMAMG00000015020 ENSMAMG00000015049 ENSMAMG00000015134 ENSMAMG00000015143 ENSMAMG00000015180 ENSMAMG00000015218 eif1ad (ENSMAMG00000015258) ENSMAMG00000015267 nrg2b (ENSMAMG00000015282) ENSMAMG00000015504 ENSMAMG00000015517 Carangaria ANCESTRAL SPECIES 15 ENSGT00390000017581.a ENSGT00940000164351 ENSGT00940000156017.eb ENSGT00950000182802.D ENSGT00940000162488.b.b ENSGT00950000182832.D.b ENSGT00940000161206 ENSGT00950000183115.b.b ENSGT01100000263536.A.a.b ENSGT01100000263536.A.a.a ENSGT01040000240444.A.a.a.a.b ENSGT01030000235435 ENSGT01100000263536.B.c.b ENSGT01100000263512.a.a.a.a ENSGT00550000075160 ENSGT00510000047733 #22 ENSGT01030000235147 ENSGT00950000183026.A.a.a.a ENSGT01060000249241 ENSGT00390000017153.a ENSGT00940000168334 ENSGT00940000155777.a ENSGT00390000000080.a.a ENSGT00940000153716.B ENSGT00950000183079.A.b.c.a.b ENSGT00940000158380.a ENSGT00730000111282.a ENSGT00940000165786 ENSGT00390000010512 ENSGT00510000047104 ENSGT00390000016655.a.b Pleuronectoidei ANCESTRAL SPECIES 18 ENSGT00390000017581.a ENSGT00940000164351 ENSGT00940000156017.eb ENSGT00980000199388 ENSGT00940000162488.b.b ENSGT00950000182832.D.b ENSGT00940000161206 ENSGT00950000183115.b.b ENSGT01100000263536.A.a.b ENSGT01100000263536.A.a.a ENSGT01040000240444.A.a.a.a.b ENSGT01030000235435 ENSGT01100000263536.B.c.b ENSGT01100000263512.a.a.a.a ENSGT00550000075160 ENSGT00510000047733 #22 ENSGT01030000235147 ENSGT00950000183026.A.a.a.a ENSGT00390000017153.a ENSGT00940000168334 ENSGT00940000155777.a ENSGT00390000000080.a.a ENSGT00940000153716.B ENSGT00950000183079.A.b.c.a.b ENSGT00940000158380.a ENSGT00730000111282.a ENSGT00940000165786 ENSGT00390000010512 ENSGT00510000047104 ENSGT00390000016655.a.b ENSGT00940000155266 Tongue sole MODERN SPECIES 6 POU3F4 (ENSCSEG00000018166) ENSCSEG00000018174 sh3bgrl (ENSCSEG00000018177) hmgn7 (ENSCSEG00000018183) ENSCSEG00000018191 ENSCSEG00000018195 TBX22 (ENSCSEG00000018204) ITM2A (ENSCSEG00000018220) ENSCSEG00000018227 p2ry10 (ENSCSEG00000018232) LPAR4 (ENSCSEG00000018235) ENSCSEG00000018245 cysltr1 (ENSCSEG00000018252) ENSCSEG00000018259 polr1d (ENSCSEG00000018268) sybl1 (ENSCSEG00000018275) #22 mtus1a (ENSCSEG00000018279) pdgfrl (ENSCSEG00000018288) slc7a2 (ENSCSEG00000018295) mtmr7a (ENSCSEG00000018326) cnot7 (ENSCSEG00000018340) zdhhc2 (ENSCSEG00000018369) TENM2 (ENSCSEG00000018478) ENSCSEG00000018678 eif4ebp3l (ENSCSEG00000018681) acsl4a (ENSCSEG00000018686) nxt2 (ENSCSEG00000018710) psmd10 (ENSCSEG00000018758) ENSCSEG00000018878 xiap (ENSCSEG00000019890) STAG2 (ENSCSEG00000019895) Turbot MODERN SPECIES 4 RPS6KA6 (ENSSMAG00000011445) POU3F4 (ENSSMAG00000011586) ENSSMAG00000011587 ENSSMAG00000011595 sh3bgrl (ENSSMAG00000011626) ENSSMAG00000011657 ENSSMAG00000011683 ENSSMAG00000011740 ITM2A (ENSSMAG00000011779) GPR174 (ENSSMAG00000011805) P2RY10 (ENSSMAG00000011825) LPAR4 (ENSSMAG00000011832) ENSSMAG00000011835 ENSSMAG00000011837 ENSSMAG00000011861 ENSSMAG00000011888 #22 ENSSMAG00000011938 ENSSMAG00000034549 pdgfrl (ENSSMAG00000011982) slc7a2 (ENSSMAG00000012002) mtmr7a (ENSSMAG00000012037) cnot7 (ENSSMAG00000012086) zdhhc2 (ENSSMAG00000012120) MICU3 (ENSSMAG00000012147) fgf20b (ENSSMAG00000012229) her11 (ENSSMAG00000012236) her5 (ENSSMAG00000012243) ENSSMAG00000012267 pfdn6 (ENSSMAG00000012335) mmgt1 (ENSSMAG00000012344) ints6l (ENSSMAG00000012383) Carangaria_A ANCESTRAL SPECIES 22 ENSGT00940000161429 ENSGT00390000017581.a ENSGT00940000164351 ENSGT00940000156017.eb ENSGT00950000182802.D ENSGT00940000162488.b.b ENSGT00950000182832.D.b ENSGT00940000161206 ENSGT00950000183115.b.b ENSGT01100000263536.A.a.b ENSGT01100000263536.A.a.a ENSGT01040000240444.A.a.a.a.b ENSGT01100000263536.B.c.b ENSGT01100000263512.a.a.a.a ENSGT00550000075160 ENSGT00510000047733 #22 ENSGT00950000183026.A.a.a.a ENSGT01060000249241 ENSGT00390000017153.a ENSGT00940000168334 ENSGT00940000155777.a ENSGT00390000000080.a.a ENSGT00940000153716.B ENSGT00950000183079.A.b.c.a.b ENSGT00940000158380.a ENSGT00730000111282.a ENSGT00940000165786 ENSGT00390000010512 ENSGT00510000047104 ENSGT00390000016655.a.b ENSGT00940000155266 Seriola ANCESTRAL SPECIES 22 ENSGT00940000161429 ENSGT00390000017581.a ENSGT00940000164351 ENSGT00940000156017.eb ENSGT00950000182802.D ENSGT00940000162488.b.b ENSGT00950000182832.D.b ENSGT00940000161206 ENSGT00950000183115.b.b ENSGT01100000263536.A.a.b ENSGT01100000263536.A.a.a ENSGT01040000240444.A.a.a.a.b ENSGT01100000263536.B.c.b ENSGT01100000263512.a.a.a.a ENSGT00550000075160 ENSGT00510000047733 #22 ENSGT00950000183026.A.a.a.a ENSGT01060000249241 ENSGT00390000017153.a ENSGT00940000168334 ENSGT00940000155777.a ENSGT00390000000080.a.a ENSGT00940000153716.B ENSGT00950000183079.A.b.c.a.b ENSGT00940000158380.a ENSGT00730000111282.a ENSGT00940000165786 ENSGT00390000010512 ENSGT00510000047104 ENSGT00390000016655.a.b ENSGT00940000155266 Greater amberjack MODERN SPECIES 67 POU3F4 (ENSSDUG00000011661) ENSSDUG00000011677 ENSSDUG00000011698 sh3bgrl (ENSSDUG00000011728) hmgn6 (ENSSDUG00000011746) ENSSDUG00000011768 ENSSDUG00000011789 TBX22 (ENSSDUG00000011823) ITM2A (ENSSDUG00000011852) ENSSDUG00000011866 p2ry10 (ENSSDUG00000011878) LPAR4 (ENSSDUG00000011885) cysltr1 (ENSSDUG00000011895) ENSSDUG00000011899 polr1d (ENSSDUG00000011930) sybl1 (ENSSDUG00000011947) #22 ENSSDUG00000011976 ENSSDUG00000011996 pdgfrl (ENSSDUG00000012006) slc7a2 (ENSSDUG00000012050) mtmr7a (ENSSDUG00000012316) cnot7 (ENSSDUG00000012370) zdhhc2 (ENSSDUG00000012397) MICU3 (ENSSDUG00000012441) fgf20b (ENSSDUG00000012470) her11 (ENSSDUG00000012485) her5 (ENSSDUG00000012498) pfdn6 (ENSSDUG00000012507) mmgt1 (ENSSDUG00000012533) ints6l (ENSSDUG00000012542) mospd1 (ENSSDUG00000012599) Yellowtail amberjack MODERN SPECIES 3258 POU3F4 (ENSSLDG00000024054) ENSSLDG00000024037 ENSSLDG00000024012 sh3bgrl (ENSSLDG00000023999) hmgn7 (ENSSLDG00000023982) ENSSLDG00000023965 ENSSLDG00000023947 TBX22 (ENSSLDG00000023919) ITM2A (ENSSLDG00000023901) ENSSLDG00000023898 p2ry10 (ENSSLDG00000023892) LPAR4 (ENSSLDG00000023891) ENSSLDG00000023889 ENSSLDG00000023876 polr1d (ENSSLDG00000023871) sybl1 (ENSSLDG00000023861) #22 ENSSLDG00000023834 ENSSLDG00000023823 pdgfrl (ENSSLDG00000023820) slc7a2 (ENSSLDG00000023803) mtmr7a (ENSSLDG00000023783) cnot7 (ENSSLDG00000023768) zdhhc2 (ENSSLDG00000023735) MICU3 (ENSSLDG00000023721) fgf20b (ENSSLDG00000023713) her11 (ENSSLDG00000023696) her5 (ENSSLDG00000023690) pfdn6 (ENSSLDG00000023681) mmgt1 (ENSSLDG00000023672) ints6l (ENSSLDG00000023622) mospd1 (ENSSLDG00000023610) Barramundi perch MODERN SPECIES 63 rps6kal (ENSLCAG00010001927) POU3F4 (ENSLCAG00010001788) ENSLCAG00010001784 ENSLCAG00010001779 sh3bgrl (ENSLCAG00010001775) ENSLCAG00010001767 ENSLCAG00010001762 TBX22 (ENSLCAG00010001754) ITM2A (ENSLCAG00010001749) ENSLCAG00010001747 p2ry10 (ENSLCAG00010001745) LPAR4 (ENSLCAG00010001743) cysltr1 (ENSLCAG00010001742) ENSLCAG00010001737 polr1d (ENSLCAG00010001729) sybl1 (ENSLCAG00010001722) #22 ENSLCAG00010001721 mtus1a (ENSLCAG00010001712) pdgfrl (ENSLCAG00010001703) slc7a2 (ENSLCAG00010001563) mtmr7a (ENSLCAG00010001361) cnot7 (ENSLCAG00010001291) zdhhc2 (ENSLCAG00010001168) MICU3 (ENSLCAG00010001115) fgf20b (ENSLCAG00010001102) Pinecone sodierfish MODERN SPECIES 1 POU3F4 (ENSMMDG00005018402) ENSMMDG00005018401 ENSMMDG00005018399 sh3bgrl (ENSMMDG00005018393) ENSMMDG00005018390 TENT5D (ENSMMDG00005018387) ENSMMDG00005018332 TBX22 (ENSMMDG00005018321) ITM2A (ENSMMDG00005018320) ENSMMDG00005018307 p2ry10 (ENSMMDG00005018304) LPAR4 (ENSMMDG00005018302) cysltr1 (ENSMMDG00005018300) ENSMMDG00005018296 polr1d (ENSMMDG00005018283) sybl1 (ENSMMDG00005018280) #22 ENSMMDG00005018276 ENSMMDG00005018275 pdgfrl (ENSMMDG00005018273) slc7a2 (ENSMMDG00005018260) mtmr7a (ENSMMDG00005018188) cnot7 (ENSMMDG00005018183) zdhhc2 (ENSMMDG00005018181) MICU3 (ENSMMDG00005018178) fgf20b (ENSMMDG00005018177) ENSMMDG00005018175 her5 (ENSMMDG00005018173) pfdn6 (ENSMMDG00005018172) mmgt1 (ENSMMDG00005018169) ints6l (ENSMMDG00005018160) mospd1 (ENSMMDG00005018146) Cod MODERN SPECIES 1 RPS6KA6 (ENSGMOG00000004569) ENSGMOG00000020044 ENSGMOG00000032586 ENSGMOG00000034950 SH3BGRL (ENSGMOG00000036926) ENSGMOG00000024037 ENSGMOG00000030994 TBX22 (ENSGMOG00000025705) ITM2A (ENSGMOG00000027486) ENSGMOG00000036141 P2RY10 (ENSGMOG00000029939) LPAR4 (ENSGMOG00000023727) CYSLTR1 (ENSGMOG00000035961) ENSGMOG00000013737 ENSGMOG00000027407 ENSGMOG00000030516 #22 ENSGMOG00000034654 pdgfrl (ENSGMOG00000022879) slc7a2 (ENSGMOG00000030398) mtmr7a (ENSGMOG00000022414) cnot7 (ENSGMOG00000004954) zdhhc2 (ENSGMOG00000036111) MICU3 (ENSGMOG00000025023) fgf20b (ENSGMOG00000027640) her11 (ENSGMOG00000034035) her5 (ENSGMOG00000036616) pfdn6 (ENSGMOG00000036029) mmgt1 (ENSGMOG00000031158) ints6l (ENSGMOG00000023260) mospd1 (ENSGMOG00000031225) pabir2 (ENSGMOG00000024888) Protacanthopterygii ANCESTRAL SPECIES 11 ENSGT00940000161429 ENSGT00940000164351 ENSGT00530000063666.a ENSGT00940000164237 ENSGT00390000011425.A ENSGT00940000156017.eb ENSGT00980000199388 ENSGT00940000161206 ENSGT00950000183115.b.b ENSGT01100000263536.A.a.b ENSGT01100000263536.A.a.a ENSGT01040000240444.A.a.a.a.b ENSGT01100000263536.B.c.b ENSGT01100000263512.a.a.a.a ENSGT00550000075160 ENSGT00510000047733 #22 ENSGT00950000182915.a.b ENSGT00940000155374.g.b ENSGT00950000183097.a.a.a.f.a.b ENSGT00390000012030.b.a ENSGT00950000183107.a.b.b ENSGT00940000162488.b.a ENSGT00950000182832.D.b ENSGT00950000183031.B ENSGT00940000167119 ENSGT00940000155374.g.a ENSGT00950000183097.a.a.a.f.a.a ENSGT00940000155902.d ENSGT00990000203619.B.a.b ENSGT00940000154133.B ENSGT00940000160033.d Salmoninae DUPLICATION Salmoninae ANCESTRAL SPECIES 1036 ENSGT01100000263512.a.a.a.a ENSGT00550000075160 ENSGT00510000047733.w #22 ENSGT00950000182915.a.b ENSGT00940000155374.g.b.g Salmoninae_a ANCESTRAL SPECIES 201 ENSGT01060000248855 ENSGT00390000008591.d ENSGT00940000156017.eb.b ENSGT00940000161206 ENSGT01040000240444.A.a.a.a.b.f ENSGT01100000263536.B.c.b.g ENSGT00510000047733.w #22 ENSGT00950000182915.a.b ENSGT00940000155374.g.b.g Salmo ANCESTRAL SPECIES 22 ENSGT00390000013063.u.f ENSGT00940000157650.wb ENSGT00940000153936.a.f ENSGT00940000159041.g ENSGT00720000108834.c.a ENSGT00720000108834.c.b ENSGT00940000165093.h ENSGT00940000161440.f.b ENSGT00390000003602 ENSGT01060000248855 ENSGT00390000008591.d ENSGT00940000156017.eb.b ENSGT00940000161206 ENSGT01040000240444.A.a.a.a.b.f ENSGT01100000263536.B.c.b.g ENSGT00510000047733.w #22 ENSGT00950000182915.a.b ENSGT00940000155374.g.b.g Atlantic salmon DUPLICATION Atlantic salmon DUPLICATION Atlantic salmon MODERN SPECIES 28 ENSSSAG00000109101 ENSSSAG00000082996 ENSSSAG00000105540 ENSSSAG00000094961 ENSSSAG00000098968 ENSSSAG00000098602 ENSSSAG00000113182 ENSSSAG00000021509 ENSSSAG00000089563 ENSSSAG00000038996 SH3BGRL (ENSSSAG00000116254) ENSSSAG00000043955 ENSSSAG00000097782 ENSSSAG00000088613 ENSSSAG00000082912 ENSSSAG00000054034 #22 ENSSSAG00000103373 ENSSSAG00000117610 zgc:113162 (ENSSSAG00000080511) ENSSSAG00000115817 SMD3 (ENSSSAG00000097783) ENSSSAG00000108430 ENSSSAG00000001364 ENSSSAG00000093209 pus1 (ENSSSAG00000000636) noc4l (ENSSSAG00000102072) vps29 (ENSSSAG00000116004) gpn3 (ENSSSAG00000097446) arpc3 (ENSSSAG00000030191) ub2g1 (ENSSSAG00000120549) ULK1 (ENSSSAG00000000318) Atlantic salmon MODERN SPECIES 28 ENSSSAG00000103899 ENSSSAG00000085273 ENSSSAG00000119854 ENSSSAG00000113833 ENSSSAG00000102547 ENSSSAG00000107629 ENSSSAG00000116383 ENSSSAG00000082626 ENSSSAG00000094891 ENSSSAG00000107148 ENSSSAG00000110765 ENSSSAG00000117655 ENSSSAG00000114858 ENSSSAG00000087384 ENSSSAG00000082051 ENSSSAG00000118309 #22 ENSSSAG00000042297 ENSSSAG00000097649 ENSSSAG00000104353 ENSSSAG00000118207 ENSSSAG00000042391 ENSSSAG00000042423 zgc:174917 (ENSSSAG00000067386) si:ch211-153b23.5 (ENSSSAG00000067390) ENSSSAG00000095290 irg1l (ENSSSAG00000113071) glod5 (ENSSSAG00000040687) ENSSSAG00000102600 ENSSSAG00000040726 ENSSSAG00000095301 ENSSSAG00000101729 Atlantic salmon MODERN SPECIES 24 cysltr1 (ENSSSAG00000114085) ENSSSAG00000103035 p2ry10 (ENSSSAG00000090284) ENSSSAG00000001471 ENSSSAG00000001469 itm2a (ENSSSAG00000001467) ENSSSAG00000094875 ENSSSAG00000094932 ENSSSAG00000040071 ENSSSAG00000001494 ENSSSAG00000084115 ENSSSAG00000001507 vamp7 (ENSSSAG00000084462) #22 ENSSSAG00000084863 ENSSSAG00000001588 ENSSSAG00000082305 ENSSSAG00000089528 ENSSSAG00000113102 ENSSSAG00000001901 ENSSSAG00000118270 ENSSSAG00000036405 ENSSSAG00000059352 ENSSSAG00000018857 ENSSSAG00000012365 ENSSSAG00000022260 ENSSSAG00000017304 ENSSSAG00000120105 RLIM (ENSSSAG00000117649) River trout DUPLICATION River trout MODERN SPECIES 22 hnmt (ENSSTUG00000029653) cysltr1 (ENSSTUG00000029676) LPAR4 (ENSSTUG00000029680) p2ry10 (ENSSTUG00000029694) GPR174 (ENSSTUG00000029700) ITM2A (ENSSTUG00000029702) rps6kal (ENSSTUG00000029798) hdx (ENSSTUG00000033573) polr1d (ENSSTUG00000033598) sybl1 (ENSSTUG00000033606) #22 ENSSTUG00000033663 si:ch211-153b23.4 (ENSSTUG00000033670) ENSSTUG00000033682 RLIM (ENSSTUG00000033690) ENSSTUG00000033700 ENSSTUG00000033743 ENSSTUG00000033783 fgf16 (ENSSTUG00000033789) abcb7 (ENSSTUG00000033827) ENSSTUG00000034477 gja2 (ENSSTUG00000034496) GJB1 (ENSSTUG00000034509) VMA21 (ENSSTUG00000034528) spink2.1 (ENSSTUG00000034550) neurl1b (ENSSTUG00000034562) River trout MODERN SPECIES 4 ENSSTUG00000039929 fgf12b (ENSSTUG00000039870) ENSSTUG00000039830 ENSSTUG00000039680 cldn15lb (ENSSTUG00000039650) atg16l1 (ENSSTUG00000039624) DGKD (ENSSTUG00000039376) IWS1 (ENSSTUG00000039292) ENSSTUG00000039275 brca2 (ENSSTUG00000039182) ENSSTUG00000039166 SH3BGRL (ENSSTUG00000039155) ENSSTUG00000039145 LPAR4 (ENSSTUG00000039139) cysltr1 (ENSSTUG00000039135) sybl1 (ENSSTUG00000039115) #22 ENSSTUG00000039105 CNGA2 (ENSSTUG00000039093) NEXMIF (ENSSTUG00000039076) si:ch211-153b23.5 (ENSSTUG00000039068) zgc:174917 (ENSSTUG00000039058) ENSSTUG00000039047 zgc:174917 (ENSSTUG00000039053) si:ch211-153b23.5 (ENSSTUG00000039019) ENSSTUG00000039010 ENSSTUG00000039004 magt1 (ENSSTUG00000038898) dusp1 (ENSSTUG00000038885) spink2.1 (ENSSTUG00000038882) ergic1 (ENSSTUG00000038862) ENSSTUG00000038856 Oncorhynchus ANCESTRAL SPECIES 34 ENSGT00940000155753.t ENSGT00940000153941.a.b ENSGT00390000015700.b.w ENSGT00390000015364.a.b.b.j.b ENSGT00390000003706.a.b.a.cb.a.b ENSGT00390000001775.A.k ENSGT00390000001775.A.l ENSGT00390000003706.a.b.a.cb.a.a ENSGT00390000015364.a.b.b.j.a ENSGT01060000248855 ENSGT00390000008591.d ENSGT00940000156017.eb.b ENSGT00940000161206 ENSGT01040000240444.A.a.a.a.b.e ENSGT01100000263536.B.c.b.g ENSGT00510000047733.w #22 ENSGT00950000182915.a.b ENSGT00940000155374.g.b.g Rainbow trout DUPLICATION Rainbow trout MODERN SPECIES 5 ENSOMYG00000061729 ENSOMYG00000027981 ENSOMYG00000070253 ENSOMYG00000074265 ENSOMYG00000077581 ENSOMYG00000002534 ENSOMYG00000052468 polr1d (ENSOMYG00000049665) ENSOMYG00000002598 #22 ENSOMYG00000075997 ENSOMYG00000061142 ENSOMYG00000052112 ENSOMYG00000006560 ENSOMYG00000053488 ENSOMYG00000016203 ENSOMYG00000050340 ZDHHC15 (ENSOMYG00000059209) ENSOMYG00000054742 ENSOMYG00000057721 ABCB7 (ENSOMYG00000002782) ENSOMYG00000016218 ENSOMYG00000016328 ENSOMYG00000062190 ENSOMYG00000051258 Rainbow trout MODERN SPECIES 23 glod5 (ENSOMYG00000033537) irg1l (ENSOMYG00000054761) ENSOMYG00000033695 si:ch211-153b23.5 (ENSOMYG00000061257) ENSOMYG00000073392 zgc:174917 (ENSOMYG00000027079) ENSOMYG00000051753 ENSOMYG00000057659 ENSOMYG00000047929 ENSOMYG00000069452 SH3BGRL (ENSOMYG00000051818) ENSOMYG00000066097 ENSOMYG00000036890 ENSOMYG00000032947 ENSOMYG00000069936 ENSOMYG00000024099 #22 ENSOMYG00000056372 ENSOMYG00000057784 ENSOMYG00000036841 ENSOMYG00000036809 ENSOMYG00000063757 ENSOMYG00000067331 ENSOMYG00000062780 unc5a (ENSOMYG00000073090) ENSOMYG00000037275 pdlim7 (ENSOMYG00000073331) ENSOMYG00000033598 higd2a (ENSOMYG00000056778) faf2 (ENSOMYG00000060172) ENSOMYG00000063556 ENSOMYG00000067249 Oncorhynchus_a ANCESTRAL SPECIES 201 ENSGT01100000263536.B.c.b.h ENSGT01100000263536.A.a.a ENSGT01030000234518.D ENSGT00940000159242 ENSGT00390000008591.c ENSGT01100000263512.a.a.a.a ENSGT00550000075160 ENSGT00510000047733.w #22 ENSGT00950000183097.a.a.a.f.a.b ENSGT00390000012030.b.a.g ENSGT00390000015364.a.b.a.x ENSGT00940000155753.s Coho salmon MODERN SPECIES 10 cysltr1 (ENSOKIG00005029326) p2ry10 (ENSOKIG00005029314) ENSOKIG00005029311 GPR174 (ENSOKIG00005029307) ENSOKIG00005029305 ENSOKIG00005029299 ENSOKIG00005029290 ENSOKIG00005029259 ENSOKIG00005023280 ENSOKIG00005022898 ENSOKIG00005022658 ENSOKIG00005022627 ENSOKIG00005022595 sybl1 (ENSOKIG00005022535) #22 ENSOKIG00005022144 MAGT1 (ENSOKIG00005020726) si:ch211-153b23.4 (ENSOKIG00005020654) ENSOKIG00005020647 ENSOKIG00005020640 ENSOKIG00005020638 ENSOKIG00005020636 LRRTM2 (ENSOKIG00005020625) LRRTM2 (ENSOKIG00005020617) ENSOKIG00005020613 CTNNA1 (ENSOKIG00005019938) ENSOKIG00005019876 ENSOKIG00005019864 ENSOKIG00005019855 ENSOKIG00005019834 Chinook salmon MODERN SPECIES 348 sybl1 (ENSOTSG00005021821) #22 PLS3 (ENSOTSG00005021819) Huchen MODERN SPECIES 7084 sybl1 (ENSHHUG00000011702) #22 Salmoninae ANCESTRAL SPECIES 1143 ENSGT00940000155570.t.e.a ENSGT00940000155496.a.a.f.a.a ENSGT00940000154486.b.a.a.b.e.a.a.b.b ENSGT00510000047733.x #22 Huchen MODERN SPECIES 479 KIF2A (ENSHHUG00000037200) ZSWIM6 (ENSHHUG00000037129) ENSHHUG00000037126 ENSHHUG00000037095 #22 hnrnpdl (ENSHHUG00000037083) enoph1 (ENSHHUG00000037065) TMEM150C (ENSHHUG00000037061) SCD5 (ENSHHUG00000036669) sec31a (ENSHHUG00000036459) lin54 (ENSHHUG00000036430) cops4 (ENSHHUG00000036395) ENSHHUG00000036391 plac8.1 (ENSHHUG00000036390) ENSHHUG00000036374 cwc27 (ENSHHUG00000036254) srek1ip1 (ENSHHUG00000036217) ENSHHUG00000036210 trim23 (ENSHHUG00000036101) lhx5 (ENSHHUG00000036094) Salmoninae_a ANCESTRAL SPECIES 87 ENSGT00390000002172.B.a.a ENSGT00940000155122.b.bc.a ENSGT00990000203619.A.b.b.b.b.a.b.i ENSGT00390000014349.b.a ENSGT00940000167301 ENSGT00940000153594.c.e.b ENSGT00940000157897.a.g ENSGT00940000163293.c.b.c ENSGT00940000155449.u ENSGT00940000155149.jc.a.a ENSGT00500000044984.r ENSGT00940000153849.a.a.b.c ENSGT00940000155570.t.e.a ENSGT00940000155496.a.a.f.a.a ENSGT00940000154486.b.a.a.b.e.a.a.b.b ENSGT00510000047733.x #22 Oncorhynchus ANCESTRAL SPECIES 67 ENSGT00390000014349.b.b ENSGT00990000203619.A.b.b.b.b.a.b.i.b ENSGT00390000014349.b.a ENSGT00940000167301 ENSGT00940000153594.c.e.b ENSGT00940000157897.a.g ENSGT01000000220453.B ENSGT00940000163293.c.b.c ENSGT00940000155449.u ENSGT00940000155149.jc.a.a ENSGT00500000044984.r ENSGT00940000153849.a.a.b.c ENSGT00940000155570.t.e.a ENSGT00940000155496.a.a.f.a.a ENSGT00940000154486.b.a.a.b.e.a.a.b.b ENSGT00510000047733.x #22 Rainbow trout MODERN SPECIES 26 ENSOMYG00000001231 ENSOMYG00000058786 ENSOMYG00000001548 ENSOMYG00000002542 ENSOMYG00000003166 ENSOMYG00000003236 kmt5aa (ENSOMYG00000003262) ENSOMYG00000007077 ENSOMYG00000013783 ENSOMYG00000055276 ENSOMYG00000014145 ENSOMYG00000016978 ENSOMYG00000017505 ENSOMYG00000057598 ENSOMYG00000076747 ENSOMYG00000017971 #22 HNRNPD (ENSOMYG00000070998) hnrnpdl (ENSOMYG00000017992) enoph1 (ENSOMYG00000018003) TMEM150C (ENSOMYG00000018031) SCD5 (ENSOMYG00000018048) sec31a (ENSOMYG00000018142) lin54 (ENSOMYG00000019729) COPS4 (ENSOMYG00000020097) plac8.1 (ENSOMYG00000020117) ADAMTS6 (ENSOMYG00000020127) ENSOMYG00000020145 srek1ip1 (ENSOMYG00000020161) ENSOMYG00000068431 ENSOMYG00000020206 ENSOMYG00000020230 Oncorhynchus_a ANCESTRAL SPECIES 74 ENSGT00390000014349.b.b ENSGT00990000203619.A.b.b.b.b.a.b.i.b ENSGT00390000014349.b.a ENSGT00940000167301 ENSGT00940000153594.c.e.b ENSGT00940000157897.a.g ENSGT01000000220453.B ENSGT00940000163293.c.b.c ENSGT00940000155449.u ENSGT00940000155149.jc.a.a ENSGT00500000044984.r ENSGT00940000153849.a.a.b.c ENSGT00940000155570.t.e.a ENSGT00940000155496.a.a.f.a.a ENSGT00940000154486.b.a.a.b.e.a.a.b.b ENSGT00510000047733.x #22 ENSGT00940000154426.g Chinook salmon MODERN SPECIES 12 denr (ENSOTSG00005038097) ENSOTSG00005038174 ENSOTSG00005038177 denr (ENSOTSG00005038179) ENSOTSG00005038197 HIP1R (ENSOTSG00005038206) RILPL1 (ENSOTSG00005040268) kmt5aa (ENSOTSG00005040273) sbno1 (ENSOTSG00005040327) CDK2AP1 (ENSOTSG00005044679) ENSOTSG00005044680 PITPNM2 (ENSOTSG00005044683) KIF2A (ENSOTSG00005045476) ZSWIM6 (ENSOTSG00005046065) ENSOTSG00005046142 ENSOTSG00005046154 #22 HNRNPD (ENSOTSG00005046156) ENSOTSG00005046157 enoph1 (ENSOTSG00005046160) TMEM150C (ENSOTSG00005046161) ENSOTSG00005046164 sec31a (ENSOTSG00005046166) lin54 (ENSOTSG00005046176) cops4 (ENSOTSG00005046196) plac8.1 (ENSOTSG00005046202) cwc27 (ENSOTSG00005046208) ENSOTSG00005046272 ENSOTSG00005046273 trim23 (ENSOTSG00005046279) lhx5 (ENSOTSG00005046286) ENSOTSG00005046290 Coho salmon MODERN SPECIES 15 DENR (ENSOKIG00005020663) ENSOKIG00005020652 denr (ENSOKIG00005020631) ENSOKIG00005020614 HIP1R (ENSOKIG00005020305) RILPL1 (ENSOKIG00005020204) ENSOKIG00005020181 kmt5aa (ENSOKIG00005020168) SBNO1 (ENSOKIG00005019405) ENSOKIG00005019246 ENSOKIG00005019234 PITPNM2 (ENSOKIG00005019081) KIF2A (ENSOKIG00005017428) ZSWIM6 (ENSOKIG00005016943) ENSOKIG00005016885 ENSOKIG00005016868 #22 hnrnpdl (ENSOKIG00005016837) ENSOKIG00005016830 enoph1 (ENSOKIG00005016806) TMEM150C (ENSOKIG00005016778) SCD5 (ENSOKIG00005015963) sec31a (ENSOKIG00005015034) LIN54 (ENSOKIG00005014104) ENSOKIG00005014052 PLAC8 (ENSOKIG00005014047) COPS4 (ENSOKIG00005013962) ADAMTS6 (ENSOKIG00005013919) cwc27 (ENSOKIG00005013877) srek1ip1 (ENSOKIG00005013859) TRIM23 (ENSOKIG00005013615) lhx5 (ENSOKIG00005013593) Salmo ANCESTRAL SPECIES 54 ENSGT00390000002172.B.a.a.a ENSGT00940000155122.b.bc.a ENSGT00990000203619.A.b.b.b.b.a.b.i ENSGT00390000014349.b.a ENSGT00940000167301 ENSGT00940000153594.c.e.b ENSGT00940000157897.a.g ENSGT00940000163293.c.b.c ENSGT00940000155449.u ENSGT00940000155149.jc.a.a ENSGT00500000044984.r ENSGT00940000153849.a.a.b.c ENSGT00940000155570.t.e.a ENSGT00940000155496.a.a.f.a.a ENSGT00940000154486.b.a.a.b.e.a.a.b.b ENSGT00510000047733.x #22 ENSGT00940000154426.g ENSGT00440000039914.`b ENSGT01030000234578.A.a.j ENSGT00940000162090.c ENSGT00390000003175.a.b.j ENSGT00940000155881.i ENSGT00940000153510.b.m ENSGT00940000157329.i ENSGT00940000156571.ab.b ENSGT00940000155967.e ENSGT00510000047710.d ENSGT00940000158733.d ENSGT00940000158562.i ENSGT00940000166328.c ENSGT00510000048902.a.f.d Atlantic salmon MODERN SPECIES ENSSSAG00000110143 ENSSSAG00000119962 ENSSSAG00000080481 ENSSSAG00000080479 ENSSSAG00000080464 ENSSSAG00000080448 kmt5aa (ENSSSAG00000080440) sbno1 (ENSSSAG00000079755) CDK2AP1 (ENSSSAG00000079661) ENSSSAG00000079650 ENSSSAG00000102116 PITPNM2 (ENSSSAG00000079317) ENSSSAG00000117480 ENSSSAG00000096567 ENSSSAG00000093344 ENSSSAG00000078737 #22 ENSSSAG00000099062 HNRNPD (ENSSSAG00000078731) hnrnpdl (ENSSSAG00000081790) enoph (ENSSSAG00000055658) TMEM150C (ENSSSAG00000078720) sec31a (ENSSSAG00000074760) lin54 (ENSSSAG00000074551) COPS4 (ENSSSAG00000074531) plac8 (ENSSSAG00000074530) ADAMTS6 (ENSSSAG00000074302) cwc27 (ENSSSAG00000074266) S12IP (ENSSSAG00000074261) ENSSSAG00000110043 ENSSSAG00000083041 ENSSSAG00000073451 River trout MODERN SPECIES 15 ENSSTUG00000024023 ENSSTUG00000024014 ENSSTUG00000024010 denr (ENSSTUG00000023820) ENSSTUG00000023793 HIP1R (ENSSTUG00000023701) RILPL1 (ENSSTUG00000023621) rnf170 (ENSSTUG00000023612) kmt5aa (ENSSTUG00000023595) sbno1 (ENSSTUG00000017351) CDK2AP1 (ENSSTUG00000017150) MPHOSPH9 (ENSSTUG00000017112) PITPNM2 (ENSSTUG00000016889) KIF2A (ENSSTUG00000015810) ZSWIM6 (ENSSTUG00000015026) ENSSTUG00000014984 #22 HNRNPD (ENSSTUG00000014967) hnrnpdl (ENSSTUG00000014962) enoph1 (ENSSTUG00000014951) TMEM150C (ENSSTUG00000014936) SCD5 (ENSSTUG00000014929) sec31a (ENSSTUG00000013337) lin54 (ENSSTUG00000012887) cops4 (ENSSTUG00000012760) PLAC8 (ENSSTUG00000012753) ADAMTS6 (ENSSTUG00000012203) cwc27 (ENSSTUG00000011760) srek1ip1 (ENSSTUG00000011717) ENSSTUG00000011656 trim23 (ENSSTUG00000011202) lhx5 (ENSSTUG00000011190) Northern pike MODERN SPECIES 3 POU3F4 (ENSELUG00000005441) ENSELUG00000005402 SH3BGRL (ENSELUG00000025624) ENSELUG00000005265 ENSELUG00000026916 ENSELUG00000005246 TBX22 (ENSELUG00000005210) ITM2A (ENSELUG00000005189) ENSELUG00000005180 p2ry10 (ENSELUG00000029730) LPAR4 (ENSELUG00000005151) cysltr1 (ENSELUG00000026002) ENSELUG00000034066 ENSELUG00000005121 rpac2 (ENSELUG00000005105) sybl1 (ENSELUG00000005074) #22 ENSELUG00000005053 CNGA2 (ENSELUG00000031447) PLS3 (ENSELUG00000005026) magt1 (ENSELUG00000004987) zgc:174917 (ENSELUG00000001452) si:ch211-153b23.5 (ENSELUG00000004946) si:ch211-153b23.4 (ENSELUG00000004961) ENSELUG00000004912 irg1l (ENSELUG00000004905) glod5 (ENSELUG00000004890) RLIM (ENSELUG00000004881) NEXMIF (ENSELUG00000004870) abcb7 (ENSELUG00000004864) uprt (ENSELUG00000004825) zdhhc15b (ENSELUG00000004798) Spotted gar MODERN SPECIES 673 ENSLOCG00000017490 TENT5D (ENSLOCG00000014996) chmp1b (ENSLOCG00000014992) TBX22 (ENSLOCG00000014991) ITM2A (ENSLOCG00000014989) ENSLOCG00000017489 p2ry10 (ENSLOCG00000014987) LPAR4 (ENSLOCG00000017488) ENSLOCG00000014986 cysltr1 (ENSLOCG00000017487) ENSLOCG00000014984 MLNR (ENSLOCG00000014982) rraga (ENSLOCG00000014979) ENSLOCG00000014978 polr1d (ENSLOCG00000014976) sybl1 (ENSLOCG00000014975) #22 ENSLOCG00000014969 NUP62 (ENSLOCG00000014967) dnaaf6 (ENSLOCG00000014965) cnga2a (ENSLOCG00000014964) PRRG3 (ENSLOCG00000014963) cldn2 (ENSLOCG00000017486) zgc:152774 (ENSLOCG00000014959) rbm41 (ENSLOCG00000014958) klf8 (ENSLOCG00000014956) RIPPLY1 (ENSLOCG00000014954) klf5l (ENSLOCG00000014951) pou4f4 (ENSLOCG00000014949) ENSLOCG00000014948 slc25a14 (ENSLOCG00000014944) GPR119 (ENSLOCG00000017485) Reedfish MODERN SPECIES 3 HDX (ENSECRG00000016169) ENSECRG00000016218 APOOL (ENSECRG00000016295) ENSECRG00000016317 znf711 (ENSECRG00000016350) POF1B (ENSECRG00000016431) ENSECRG00000016481 slc25a14 (ENSECRG00000016511) GPR119 (ENSECRG00000016539) cysltr1 (ENSECRG00000016566) ENSECRG00000016592 ENSECRG00000016643 rraga (ENSECRG00000016685) ENSECRG00000016761 polr1d (ENSECRG00000016798) sybl1 (ENSECRG00000011356) #22 ENSECRG00000011428 ENSECRG00000011535 dnaaf6 (ENSECRG00000011569) cnga2a (ENSECRG00000011619) ENSECRG00000011683 PRRG3 (ENSECRG00000011710) RIPPLY1 (ENSECRG00000011720) cldn2 (ENSECRG00000011734) MORC4 (ENSECRG00000011753) ENSECRG00000011777 rbm41 (ENSECRG00000011790) klf8 (ENSECRG00000011816) klf5l (ENSECRG00000011828) pou4f4 (ENSECRG00000011840) SPRY3 (ENSECRG00000011842) #21