Laurasiatheria ANCESTRAL SPECIES 26 ENSGT00390000005685 ENSGT00940000160294 ENSGT00940000163020 ENSGT00390000016992 ENSGT00940000154783.f ENSGT00390000012647 ENSGT00390000006885.a ENSGT00390000000360.r ENSGT00950000183068.a.a ENSGT00390000018904 ENSGT00910000148519 ENSGT00940000158132 ENSGT00940000161397 ENSGT00530000063582.a ENSGT00950000183055.a.b ENSGT00510000047733 #22 Laurasiatheria_a ANCESTRAL SPECIES 10 ENSGT00940000163020 ENSGT00390000016992 ENSGT00940000154783.f ENSGT00390000012647 ENSGT00390000006885.a ENSGT00390000000360.r.d ENSGT00950000183068.a.a ENSGT00390000018904 ENSGT00910000148519 ENSGT00940000158132 ENSGT00940000161397 ENSGT00530000063582.a ENSGT00950000185382 ENSGT00950000183055.a.b ENSGT01030000235464 ENSGT00510000047733 #22 Laurasiatheria_b ANCESTRAL SPECIES 10 ENSGT00940000163020 ENSGT00390000016992 ENSGT00940000154783.f ENSGT00390000012647 ENSGT00390000006885.a ENSGT00390000000360.r.d ENSGT00950000183068.a.a ENSGT00390000018904 ENSGT00910000148519 ENSGT00940000158132 ENSGT00940000161397 ENSGT00530000063582.a ENSGT00950000185382 ENSGT00950000183055.a.b ENSGT01030000235464 ENSGT00510000047733 #22 Carnivora ANCESTRAL SPECIES 11 ENSGT00940000160294 ENSGT00940000163020 ENSGT00390000016992 ENSGT00940000154783.f ENSGT00390000012647 ENSGT00390000006885.a ENSGT00390000000360.r.d ENSGT00950000183068.a.a ENSGT00390000018904 ENSGT00910000148519 ENSGT00940000158132 ENSGT00940000161397 ENSGT00530000063582.a ENSGT00950000185382 ENSGT00950000183055.a.b ENSGT00510000047733 #22 Caniformia ANCESTRAL SPECIES 22 ENSGT00940000163020 ENSGT00390000016992 ENSGT00940000160294 ENSGT00940000154783.f ENSGT00390000012647 ENSGT00390000006885.a ENSGT00390000000360.r.d ENSGT00950000183068.a.a ENSGT00390000018904 ENSGT00910000148519 ENSGT00940000158132 ENSGT00940000161397 ENSGT00530000063582.a ENSGT00950000185382 ENSGT00950000183055.a.b ENSGT00510000047733 #22 Caniformia_b ANCESTRAL SPECIES 27 ENSGT00390000005685 ENSGT00940000160294 ENSGT00940000154783.f ENSGT00390000006885.a ENSGT00390000000360.r.c.b ENSGT00390000012647 ENSGT00390000000360.r.d ENSGT00950000183068.a.a ENSGT00390000018904 ENSGT00910000148519 ENSGT00940000158132 ENSGT00940000161397 ENSGT00940000163020 ENSGT00530000063582.a ENSGT00950000183055.a.b ENSGT00510000047733 #22 Ursidae ANCESTRAL SPECIES ENSGT00510000047733 #22 Ursus ANCESTRAL SPECIES ENSGT00510000047733 #22 American black bear MODERN SPECIES 3234 VAMP7 (ENSUAMG00000027670) #22 Polar bear MODERN SPECIES 140 VAMP7 (ENSUMAG00000017420) #22 Giant Panda MODERN SPECIES 2288 F8 (ENSAMEG00000002491) ENSAMEG00000028778 FUNDC2 (ENSAMEG00000011956) ENSAMEG00000024837 CMC4 (ENSAMEG00000011961) MTCP1 (ENSAMEG00000028878) BRCC3 (ENSAMEG00000011969) ENSAMEG00000011976 VBP1 (ENSAMEG00000030279) ENSAMEG00000028809 RAB39B (ENSAMEG00000009075) CLIC2 (ENSAMEG00000009077) ENSAMEG00000026904 ENSAMEG00000025129 TMLHE (ENSAMEG00000013789) ENSAMEG00000006387 #22 Mustelinae ANCESTRAL SPECIES 272 ENSGT00950000183055.a.b ENSGT00510000047733 #22 American mink MODERN SPECIES 499 GALNT7 (ENSNVIG00000017803) HMGB2 (ENSNVIG00000017827) SAP30 (ENSNVIG00000017852) SCRG1 (ENSNVIG00000017873) SPRY3 (ENSNVIG00000017883) VAMP7 (ENSNVIG00000017903) #22 Ferret DUPLICATION Ferret MODERN SPECIES 463 ENSMPUG00000019547 ENSMPUG00000019545 ENSMPUG00000016145 ENSMPUG00000019543 GAB3 (ENSMPUG00000016143) MPP1 (ENSMPUG00000016141) F8 (ENSMPUG00000016139) DKC1 (ENSMPUG00000016136) BRCC3 (ENSMPUG00000016134) ENSMPUG00000016133 ENSMPUG00000016131 RAB39B (ENSMPUG00000016129) CLIC2 (ENSMPUG00000016128) ENSMPUG00000019541 TMLHE (ENSMPUG00000016127) ENSMPUG00000016113 #22 Ferret MODERN SPECIES 465 ENSMPUG00000015066 ENSMPUG00000015069 #22 ENSMPUG00000015070 BAMBI (ENSMPUG00000015071) WAC (ENSMPUG00000015072) ENSMPUG00000015074 MPP7 (ENSMPUG00000015076) ENSMPUG00000015078 Canidae ANCESTRAL SPECIES 50 ENSGT00940000158744 ENSGT00940000163020 ENSGT00390000016992 ENSGT00940000160294 ENSGT00940000154783.f ENSGT00390000012647.a ENSGT00390000006885.a ENSGT00390000000360.r.d ENSGT00950000183068.a.a ENSGT00390000018904 ENSGT00940000158132 ENSGT00940000161397 ENSGT00530000063582.a ENSGT00950000185382 ENSGT00950000183055.a.b ENSGT00510000047733 #22 Red fox MODERN SPECIES 304 TMLHE (ENSVVUG00000002892) SPRY3 (ENSVVUG00000002880) VAMP7 (ENSVVUG00000002875) #22 Canis_lupus ANCESTRAL SPECIES 22 ENSGT00510000047092.a ENSGT00940000158744 ENSGT00940000163020 ENSGT00390000016992.m ENSGT00940000160294 ENSGT00940000154783.f ENSGT00390000006885.a ENSGT00390000012647.a ENSGT00390000000360.r.c.a ENSGT00390000018904 ENSGT00940000158132 ENSGT00940000161397 ENSGT00530000063582.a ENSGT00950000185382 ENSGT00950000183055.a.b ENSGT00510000047733 #22 Dingo MODERN SPECIES 383 ENSCAFG00020008736 F8 (ENSCAFG00020008704) FUNDC2 (ENSCAFG00020008699) MTCP1 (ENSCAFG00020008697) CMC4 (ENSCAFG00020008696) ENSCAFG00020008684 VBP1 (ENSCAFG00020008675) RAB39B (ENSCAFG00020008673) CLIC2 (ENSCAFG00020008670) ENSCAFG00020008667 ENSCAFG00020008665 ENSCAFG00020008663 TMLHE (ENSCAFG00020008661) ENSCAFG00020008659 SPRY3 (ENSCAFG00020008657) VAMP7 (ENSCAFG00020008654) #22 Dog MODERN SPECIES 144 LAGE3 (ENSCAFG00845029708) ENSCAFG00845029817 DKC1 (ENSCAFG00845029852) MPP1 (ENSCAFG00845029936) F8 (ENSCAFG00845030098) ENSCAFG00845030269 ENSCAFG00845030278 FUNDC2 (ENSCAFG00845030300) CMC4 (ENSCAFG00845030338) MTCP1 (ENSCAFG00845030350) VBP1 (ENSCAFG00845017867) RAB39B (ENSCAFG00845017965) CLIC2 (ENSCAFG00845017998) ENSCAFG00845018126 SPRY3 (ENSCAFG00845018191) VAMP7 (ENSCAFG00845018278) #22 ENSCAFG00845018459 Felidae ANCESTRAL SPECIES 29 ENSGT00390000005685 ENSGT00940000160294 ENSGT00940000163020 ENSGT00390000016992 ENSGT00940000154783.f ENSGT00390000012647 ENSGT00390000006885.a ENSGT00390000000360.r.d ENSGT00950000183068.a.a ENSGT00390000018904 ENSGT00940000158132 ENSGT00940000161397 ENSGT00530000063582.a ENSGT01010000226875 ENSGT00950000183055.a.b ENSGT00510000047733 #22 Panthera ANCESTRAL SPECIES 53 ENSGT00940000160294.k ENSGT00940000163020 ENSGT00390000016992 ENSGT00940000160294.l.a ENSGT00940000154783.f ENSGT00390000012647 ENSGT00390000006885.a ENSGT00390000000360.r.d ENSGT00950000183068.a.a ENSGT00390000018904 ENSGT00940000158132 ENSGT00940000161397 ENSGT00530000063582.a ENSGT01010000226875 ENSGT00950000183055.a.b ENSGT00510000047733 #22 Panthera_a ANCESTRAL SPECIES 96 ENSGT00530000063582.a ENSGT01010000226875 ENSGT00950000183055.a.b ENSGT00510000047733 #22 leopard MODERN SPECIES 259 SPRY3 (ENSPPRG00000012079) VAMP7 (ENSPPRG00000004989) #22 ENSPPRG00000004932 ENSPPRG00000004918 lion MODERN SPECIES 88 ENSPLOG00000009920 FUNDC2 (ENSPLOG00000009895) CMC4 (ENSPLOG00000009878) MTCP1 (ENSPLOG00000009860) BRCC3 (ENSPLOG00000009840) ENSPLOG00000009805 VBP1 (ENSPLOG00000009773) RAB39B (ENSPLOG00000009756) ENSPLOG00000009737 ENSPLOG00000009727 ENSPLOG00000009715 ENSPLOG00000009699 TMLHE (ENSPLOG00000009686) ENSPLOG00000009660 SPRY3 (ENSPLOG00000009644) VAMP7 (ENSPLOG00000009591) #22 GTPBP6 (ENSPLOG00000009500) Tiger MODERN SPECIES 352 SPRY3 (ENSPTIG00000010662) VAMP7 (ENSPTIG00000019664) #22 Cat MODERN SPECIES 252 ENSFCAG00000045185 FUNDC2 (ENSFCAG00000031335) CMC4 (ENSFCAG00000023645) MTCP1 (ENSFCAG00000029629) BRCC3 (ENSFCAG00000019258) ENSFCAG00000027511 VBP1 (ENSFCAG00000022037) RAB39B (ENSFCAG00000038920) CLIC2 (ENSFCAG00000038526) H2AB2 (ENSFCAG00000044576) ENSFCAG00000045412 H2AB3 (ENSFCAG00000044965) TMLHE (ENSFCAG00000023758) ENSFCAG00000047531 SPRY3 (ENSFCAG00000028342) VAMP7 (ENSFCAG00000025706) #22 ENSFCAG00000048570 ENSFCAG00000010308 Laurasiatheria_c ANCESTRAL SPECIES 10 ENSGT00940000160294 ENSGT00940000163020 ENSGT00390000016992 ENSGT00940000154783.f ENSGT00390000012647 ENSGT00390000006885.a ENSGT00390000000360.r.d ENSGT00950000183068.a.a ENSGT00390000018904 ENSGT00940000158132 ENSGT00940000161397 ENSGT00530000063582.a ENSGT00950000185382 ENSGT00950000183055.a.b ENSGT01030000235464 ENSGT00510000047733 #22 Equus ANCESTRAL SPECIES 52 ENSGT00510000047092 ENSGT00940000158744 ENSGT00390000005685 ENSGT00940000160294 ENSGT00940000154783.f ENSGT00390000012647 ENSGT00390000006885.a ENSGT00390000000360.r.d ENSGT00390000018904 ENSGT00940000158132 ENSGT00940000161397 ENSGT00530000063582.a ENSGT00950000185382 ENSGT00950000183055.a.b ENSGT01030000235464 ENSGT00510000047733 #22 Horse MODERN SPECIES 480 ENSECAG00000054244 ENSECAG00000029708 ENSECAG00000058802 FUNDC2 (ENSECAG00000026822) MTCP1 (ENSECAG00000043072) BRCC3 (ENSECAG00000021441) VBP1 (ENSECAG00000001468) ENSECAG00000047761 ENSECAG00000053801 RAB39B (ENSECAG00000007380) CLIC2 (ENSECAG00000008024) TMLHE (ENSECAG00000012334) SPRY3 (ENSECAG00000058224) ENSECAG00000027923 ENSECAG00000030972 VAMP7 (ENSECAG00000014117) #22 Donkey MODERN SPECIES 36 MPP1 (ENSEASG00005007482) SMIM9 (ENSEASG00005025831) ENSEASG00005033689 ENSEASG00005004499 ENSEASG00005034088 ENSEASG00005036735 MTCP1 (ENSEASG00005004486) BRCC3 (ENSEASG00005004482) VBP1 (ENSEASG00005035328) RAB39B (ENSEASG00005034031) ENSEASG00005024036 ENSEASG00005001752 ENSEASG00005001750 ENSEASG00005038101 ENSEASG00005011059 ENSEASG00005011061 #22 ENSEASG00005036960 ENSEASG00005035090 TCEAL1 (ENSEASG00005025524) MORF4L2 (ENSEASG00005002526) ENSEASG00005002530 TMEM31 (ENSEASG00005002551) PLP1 (ENSEASG00005002561) ENSEASG00005029160 ENSEASG00005038628 MCTS1 (ENSEASG00005023018) CUL4B (ENSEASG00005000286) LAMP2 (ENSEASG00005002906) ENSEASG00005035999 ATP1B4 (ENSEASG00005007677) TMEM255A (ENSEASG00005007676) Chiroptera ANCESTRAL SPECIES 48 ENSGT00390000005685 ENSGT00940000160294 ENSGT00940000163020 ENSGT00390000016992 ENSGT00940000154783.f ENSGT00390000012647 ENSGT00390000006885.a ENSGT00390000000360.r.c.a ENSGT00390000000360.r.d ENSGT00950000183068.a.a ENSGT00390000018904 ENSGT00940000158132 ENSGT00940000161397 ENSGT00530000063582.a ENSGT00950000183055.a.b ENSGT00510000047733 #22 Megabat MODERN SPECIES 4379 VAMP7 (ENSPVAG00000000829) #22 Microchiroptera ANCESTRAL SPECIES 45 ENSGT00510000047092 ENSGT00940000158744 ENSGT00940000160294 ENSGT00390000016992 ENSGT00940000154783.f ENSGT00390000012647 ENSGT00390000006885.a ENSGT00390000000360.r.d ENSGT00950000183068.a.a ENSGT00390000018904 ENSGT00940000158132 ENSGT00940000161397 ENSGT00940000163020 ENSGT00530000063582.a ENSGT00950000183055.a.b ENSGT00510000047733 #22 ENSGT00940000162988 ENSGT00940000163246 ENSGT00940000162502 ENSGT00950000182925.D.a.b.a.a.a.a ENSGT00950000182925.D.a.b.b Microbat MODERN SPECIES 1106 GAB3 (ENSMLUG00000007763) DKC1 (ENSMLUG00000011918) MPP1 (ENSMLUG00000011938) F8 (ENSMLUG00000002117) ENSMLUG00000007776 CMC4 (ENSMLUG00000024035) MTCP1 (ENSMLUG00000003916) BRCC3 (ENSMLUG00000005420) VBP1 (ENSMLUG00000015396) RAB39B (ENSMLUG00000007660) CLIC2 (ENSMLUG00000002374) ENSMLUG00000029102 ENSMLUG00000025178 ENSMLUG00000022365 SPRY3 (ENSMLUG00000022306) VAMP7 (ENSMLUG00000012765) #22 ENSMLUG00000011370 ENSMLUG00000025240 FAAH2 (ENSMLUG00000017725) ENSMLUG00000002732 ENSMLUG00000006656 SPIN3 (ENSMLUG00000015431) ENSMLUG00000004357 UBQLN2 (ENSMLUG00000007552) KLF8 (ENSMLUG00000016695) RRAGB (ENSMLUG00000015720) USP51 (ENSMLUG00000015717) ENSMLUG00000006806 ALAS2 (ENSMLUG00000016305) ENSMLUG00000016298 PFKFB1 (ENSMLUG00000016291) Greater horseshoe bat MODERN SPECIES ENSRFEG00010002379 ENSRFEG00010002358 F8 (ENSRFEG00010002258) FUNDC2 (ENSRFEG00010002186) MTCP1 (ENSRFEG00010000401) BRCC3 (ENSRFEG00010000187) ENSRFEG00010000146 VBP1 (ENSRFEG00010000140) RAB39B (ENSRFEG00010000135) CLIC2 (ENSRFEG00010000129) ENSRFEG00010000120 ENSRFEG00010000099 ENSRFEG00010000092 TMLHE (ENSRFEG00010000091) SPRY3 (ENSRFEG00010000089) VAMP7 (ENSRFEG00010000088) #22 ENSRFEG00010000087 ENSRFEG00010000086 ENSRFEG00010000085 ENSRFEG00010000084 FAAH2 (ENSRFEG00010000083) ENSRFEG00010000082 ENSRFEG00010000081 AR (ENSRFEG00010000079) OPHN1 (ENSRFEG00010000078) YIPF6 (ENSRFEG00010000077) STARD8 (ENSRFEG00010000076) EFNB1 (ENSRFEG00010000075) PJA1 (ENSRFEG00010000073) NALF2 (ENSRFEG00010000072) EDA (ENSRFEG00010000071) Artiodactyla ANCESTRAL SPECIES 9 ENSGT00940000160294 ENSGT00940000163020 ENSGT00390000016992 ENSGT00940000154783.f ENSGT00390000012647 ENSGT00390000006885.a ENSGT00390000000360.r.d ENSGT00950000183068.a.a ENSGT00390000018904 ENSGT00940000158132 ENSGT00940000161397 ENSGT00530000063582.a ENSGT00950000185382 ENSGT00950000183055.a.b ENSGT01030000235464 ENSGT00510000047733 #22 Suina ANCESTRAL SPECIES 7 ENSGT00390000012647 ENSGT00390000006885.a ENSGT00390000000360.q.a ENSGT00950000183068.a.a ENSGT00390000018904 ENSGT00940000158132 ENSGT00390000016992 ENSGT00940000163020 ENSGT00940000160294 ENSGT00390000005685 ENSGT00940000161397 ENSGT00530000063582.a ENSGT00950000185382 ENSGT00950000183055.a.b ENSGT01030000235464 ENSGT00510000047733 #22 Chacoan peccary MODERN SPECIES 44 ENSCWAG00000000488 ENSCWAG00000000499 FUNDC2 (ENSCWAG00000000516) CMC4 (ENSCWAG00000000535) MTCP1 (ENSCWAG00000000545) BRCC3 (ENSCWAG00000000584) ENSCWAG00000000727 RAB39B (ENSCWAG00000000758) CLIC2 (ENSCWAG00000000773) ENSCWAG00000000788 ENSCWAG00000000796 TMLHE (ENSCWAG00000000814) ENSCWAG00000000835 SPRY3 (ENSCWAG00000000847) ENSCWAG00000000859 VAMP7 (ENSCWAG00000000883) #22 ENSCWAG00000000908 ENSCWAG00000000922 ENSCWAG00000000971 Pig MODERN SPECIES 300 ENSSSCG00000054901 FUNDC2 (ENSSSCG00000012817) CMC4 (ENSSSCG00000062015) MTCP1 (ENSSSCG00000012816) BRCC3 (ENSSSCG00000012813) ENSSSCG00000012812 VBP1 (ENSSSCG00000012811) RAB39B (ENSSSCG00000024233) ENSSSCG00000057979 ENSSSCG00000055307 CLIC2 (ENSSSCG00000039998) ENSSSCG00000063292 TMLHE (ENSSSCG00000038442) ENSSSCG00000035312 SPRY3 (ENSSSCG00000034345) VAMP7 (ENSSSCG00000029615) #22 Artiodactyla_a ANCESTRAL SPECIES 9 ENSGT00390000005685 ENSGT00940000160294 ENSGT00940000163020 ENSGT00390000016992 ENSGT00940000154783.f ENSGT00390000012647 ENSGT00390000006885.a ENSGT00390000000360.r.d ENSGT00950000183068.a.a ENSGT00390000018904 ENSGT00940000158132 ENSGT00940000161397 ENSGT00530000063582.a ENSGT00950000185382 ENSGT00950000183055.a.b ENSGT00510000047733 #22 Camelidae ANCESTRAL SPECIES 107 ENSGT00940000159803 ENSGT00510000047092 ENSGT00940000158744 ENSGT00390000005685 ENSGT00940000160294 ENSGT00940000154783.f ENSGT00390000012647 ENSGT00390000006885.a ENSGT00390000000360.r.d ENSGT00390000018904 ENSGT00940000158132 ENSGT00940000163020 ENSGT00940000161397 ENSGT00530000063582.a ENSGT00950000183055.a.b ENSGT00510000047733 #22 Arabian camel MODERN SPECIES 204 ENSCDRG00005017097 DKC1 (ENSCDRG00005017117) MPP1 (ENSCDRG00005017184) SMIM9 (ENSCDRG00005017392) F8 (ENSCDRG00005017422) ENSCDRG00005017538 CMC4 (ENSCDRG00005017574) MTCP1 (ENSCDRG00005017604) BRCC3 (ENSCDRG00005017635) VBP1 (ENSCDRG00005017794) RAB39B (ENSCDRG00005017901) ENSCDRG00005018049 CLIC2 (ENSCDRG00005018062) TMLHE (ENSCDRG00005018097) SPRY3 (ENSCDRG00005018145) VAMP7 (ENSCDRG00005018159) #22 ENSCDRG00005018222 Alpaca MODERN SPECIES 2991 ENSVPAG00000000273 VAMP7 (ENSVPAG00000000274) #22 Artiodactyla_b ANCESTRAL SPECIES 19 ENSGT00390000005685 ENSGT00940000160294 ENSGT00940000163020 ENSGT00390000016992 ENSGT00940000154783.f ENSGT00390000012647 ENSGT00390000006885.a ENSGT00390000000360.r.d ENSGT00950000183068.a.a ENSGT00390000018904 ENSGT00940000158132 ENSGT00940000161397 ENSGT00530000063582.a ENSGT00950000185382 ENSGT00950000183055.a.b ENSGT00510000047733 #22 Pecora ANCESTRAL SPECIES 28 ENSGT00390000005685 ENSGT00940000160294 ENSGT00390000016992 ENSGT00940000154783.f ENSGT00390000012647 ENSGT00390000006885.a ENSGT00390000000360.r.d.b ENSGT00950000183068.a.a ENSGT00390000018904 ENSGT00940000158132 ENSGT00940000161397 ENSGT00940000163020.bb ENSGT00530000063582.a ENSGT00950000185382 ENSGT00950000183055.a.b ENSGT00510000047733 #22 ENSGT00530000063872.A ENSGT00940000158229 ENSGT00940000155935 ENSGT00940000162167 ENSGT00940000159444 ENSGT00940000154972 ENSGT00940000161201 ENSGT00940000155374 ENSGT00390000006832 ENSGT00940000160946 ENSGT00530000064765 ENSGT00390000017980 ENSGT00940000160515 ENSGT00940000153299.d ENSGT00940000154344.a Yarkand deer MODERN SPECIES 1323 ENSCHYG00000021132 GAB3 (ENSCHYG00000020865) DKC1 (ENSCHYG00000020555) MPP1 (ENSCHYG00000020123) ENSCHYG00000020059 F8 (ENSCHYG00000019104) FUNDC2 (ENSCHYG00000018987) CMC4 (ENSCHYG00000018917) MTCP1 (ENSCHYG00000018801) ENSCHYG00000018655 ENSCHYG00000018338 RAB39B (ENSCHYG00000018283) CLIC2 (ENSCHYG00000018163) ENSCHYG00000018139 SPRY3 (ENSCHYG00000018105) VAMP7 (ENSCHYG00000017918) #22 Percora_a ANCESTRAL SPECIES 30 ENSGT00390000005685 ENSGT00940000160294 ENSGT00390000016992 ENSGT00940000154783.f ENSGT00390000012647 ENSGT00390000006885.a ENSGT00390000000360.r.d.b ENSGT00950000183068.a.a ENSGT00390000018904 ENSGT00940000158132 ENSGT00940000161397 ENSGT00940000163020.bb ENSGT00530000063582.a ENSGT00950000185382 ENSGT00950000183055.a.b ENSGT00510000047733 #22 ENSGT00530000063872.A ENSGT00940000158229 ENSGT00940000155935 ENSGT00940000162167 ENSGT00940000159444 ENSGT00940000154972 ENSGT00940000161201 ENSGT00940000155374 ENSGT00390000006832 ENSGT00940000160946 ENSGT00530000064765 ENSGT00390000017980 ENSGT00940000160515 ENSGT00940000153299.d ENSGT00940000154344.a Siberian musk deer MODERN SPECIES 67 MPP1 (ENSMMSG00000011258) SMIM9 (ENSMMSG00000011384) F8 (ENSMMSG00000011419) ENSMMSG00000011482 CMC4 (ENSMMSG00000011510) MTCP1 (ENSMMSG00000011532) BRCC3 (ENSMMSG00000011560) VBP1 (ENSMMSG00000011660) RAB39B (ENSMMSG00000011708) ENSMMSG00000011732 CLIC2 (ENSMMSG00000011739) ENSMMSG00000011761 TMLHE (ENSMMSG00000011781) ENSMMSG00000011850 SPRY3 (ENSMMSG00000011861) VAMP7 (ENSMMSG00000011884) #22 ENSMMSG00000012009 ENSMMSG00000013968 ENSMMSG00000013979 ENSMMSG00000014004 Bovidae ANCESTRAL SPECIES 29 ENSGT00940000160294 ENSGT00390000016992.s ENSGT00940000154783.f ENSGT00390000012647 ENSGT00390000006885.a ENSGT00390000000360.r.d.b ENSGT00950000183068.a.a ENSGT00390000018904 ENSGT00940000158132 ENSGT00390000016992.t ENSGT00940000163020.bb ENSGT00940000161397 ENSGT00530000063582.a ENSGT00950000185382 ENSGT00950000183055.a.b ENSGT00510000047733 #22 ENSGT00940000161825.v.a.a.b ENSGT00960000188264.C ENSGT00530000063872.A ENSGT00940000158229 ENSGT00940000155935 ENSGT00940000162167 ENSGT00940000159444 ENSGT00940000154972 ENSGT00940000161201 ENSGT00940000155374 ENSGT00390000006832 ENSGT00940000160946 ENSGT00530000064765 ENSGT00390000017980 ENSGT00940000160515 Caprinae ANCESTRAL SPECIES 53 ENSGT00390000005685 ENSGT00940000160294 ENSGT00390000016992.s ENSGT00940000154783.f ENSGT00390000012647 ENSGT00390000006885.a ENSGT00390000000360.r.d.b ENSGT00950000183068.a.a ENSGT00390000018904 ENSGT00940000158132 ENSGT00390000016992.t ENSGT00940000163020.bb ENSGT00940000161397 ENSGT00950000183055.a.b ENSGT00530000063582.a ENSGT00510000047733 #22 ENSGT00940000161825.v.a.a.b ENSGT00960000188264.C Goat MODERN SPECIES 36 ENSCHIG00000015970 VBP1 (ENSCHIG00000019363) RAB39B (ENSCHIG00000000158) ENSCHIG00000018644 ENSCHIG00000000266 CLIC2 (ENSCHIG00000016619) ENSCHIG00000000748 TMLHE (ENSCHIG00000000055) VAMP7 (ENSCHIG00000000128) #22 Rambouillet Sheep MODERN SPECIES 205 MPP1 (ENSOARG00020015726) SMIM9 (ENSOARG00020015879) F8 (ENSOARG00020015985) ENSOARG00020016962 FUNDC2 (ENSOARG00020017001) CMC4 (ENSOARG00020017081) MTCP1 (ENSOARG00020017110) BRCC3 (ENSOARG00020017169) VBP1 (ENSOARG00020017496) RAB39B (ENSOARG00020017597) ENSOARG00020017633 ENSOARG00020017655 RIDA (ENSOARG00020017680) CLIC2 (ENSOARG00020017713) SPRY3 (ENSOARG00020017989) VAMP7 (ENSOARG00020018024) #22 ENSOARG00020018236 ENSOARG00020018387 ENSOARG00020018399 ENSOARG00020018429 ENSOARG00020018446 ENSOARG00020018476 ENSOARG00020018489 ENSOARG00020018504 ENSOARG00020018525 ENSOARG00020018581 ENSOARG00020018615 ENSOARG00020018678 ENSOARG00020018703 ENSOARG00020018745 ENSOARG00020018798 Bovinae ANCESTRAL SPECIES 42 ENSGT00940000158744 ENSGT00940000160294 ENSGT00390000016992.s ENSGT00940000154783.f ENSGT00390000012647 ENSGT00390000006885.a ENSGT00390000000360.r.d.b ENSGT00950000183068.a.a ENSGT00390000018904 ENSGT00940000158132 ENSGT00390000016992.t ENSGT00940000161397 ENSGT00530000063582.a ENSGT00950000185382 ENSGT00950000183055.a.b ENSGT00510000047733 #22 ENSGT00940000161825.v.a.a.b ENSGT00390000012182.i.a ENSGT00940000161825.v.a.b ENSGT00910000144363.g.a.a.a.a.a ENSGT00530000063872.A ENSGT00940000158229 ENSGT00940000155935 ENSGT00940000162167 ENSGT00940000159444 ENSGT00940000154972 ENSGT00940000161201 ENSGT00940000155374 ENSGT00390000006832 ENSGT00940000160946 ENSGT00530000064765 Bos ANCESTRAL SPECIES 36 ENSGT00940000160294 ENSGT00390000016992.s ENSGT00940000154783.f ENSGT00390000012647 ENSGT00390000006885.a ENSGT00390000000360.r.d.b ENSGT00950000183068.a.a ENSGT00390000018904 ENSGT00390000000673.b.yb.a ENSGT00940000158132 ENSGT00390000016992.t ENSGT00940000161397 ENSGT00530000063582.a ENSGT00950000185382 ENSGT00950000183055.a.b ENSGT00510000047733 #22 ENSGT00940000161825.v.a.a.b ENSGT00390000012182.i.a.a.a ENSGT00390000012182.i.b ENSGT00940000161825.v.b ENSGT00530000063872.A ENSGT00940000158229 ENSGT00940000155935 ENSGT00940000162167 ENSGT01030000235010.e.b ENSGT00940000159444 ENSGT00940000154972 ENSGT00940000161201 ENSGT00940000155374 ENSGT00390000006832 ENSGT00940000160946 Bos_a ANCESTRAL SPECIES 39 ENSGT00510000047092 ENSGT00940000158744 ENSGT00940000160294 ENSGT00940000154783.f ENSGT00390000012647 ENSGT00390000006885.a ENSGT00390000000360.r.d.b ENSGT00950000183068.a.a ENSGT00390000018904 ENSGT00390000000673.b.yb.a ENSGT00940000158132 ENSGT00390000016992.t ENSGT00940000161397 ENSGT00530000063582.a ENSGT00950000183055.a.b ENSGT00510000047733 #22 ENSGT00940000161825.v.a.a.b ENSGT00390000012182.i.a.a.a Domestic yak MODERN SPECIES 69 ENSBGRG00000017378 F8 (ENSBGRG00000024985) FUNDC2 (ENSBGRG00000024951) ENSBGRG00000024933 MTCP1 (ENSBGRG00000024911) BRCC3 (ENSBGRG00000024843) ENSBGRG00000024824 ENSBGRG00000024794 VBP1 (ENSBGRG00000024762) ENSBGRG00000024744 RAB39B (ENSBGRG00000024738) ENSBGRG00000024735 CLIC2 (ENSBGRG00000024695) TMLHE (ENSBGRG00000024645) SPRY3 (ENSBGRG00000024611) VAMP7 (ENSBGRG00000024507) #22 ENSBGRG00000024491 ENSBGRG00000024481 ENSBGRG00000024460 ENSBGRG00000024444 ENSBGRG00000024428 ENSBGRG00000024396 MTM1 (ENSBGRG00000024246) MTMR1 (ENSBGRG00000023860) CD99L2 (ENSBGRG00000023715) ENSBGRG00000023671 GPR50 (ENSBGRG00000023639) ENSBGRG00000023594 ENSBGRG00000023537 PRRG3 (ENSBGRG00000023519) ENSBGRG00000023506 Wild yak MODERN SPECIES 1152 CLIC2 (ENSBMUG00000010104) TMLHE (ENSBMUG00000010079) SPRY3 (ENSBMUG00000010058) VAMP7 (ENSBMUG00000010034) #22 ENSBMUG00000010013 ENSBMUG00000010002 Bos_b ANCESTRAL SPECIES 31 ENSGT00940000160294 ENSGT00390000016992.s ENSGT00940000154783.f ENSGT00390000012647 ENSGT00390000006885.a ENSGT00390000000360.r.d.b ENSGT00950000183068.a.a ENSGT00390000018904 ENSGT00390000000673.b.yb.a ENSGT00940000158132 ENSGT00390000016992.t ENSGT00940000161397 ENSGT00530000063582.a ENSGT00950000185382 ENSGT00950000183055.a.b ENSGT00510000047733 #22 ENSGT00940000161825.v.a.a.b ENSGT00390000012182.i.a.a.a ENSGT00390000012182.i.b ENSGT00940000161825.v.b ENSGT00530000063872.A ENSGT00940000158229 ENSGT00940000155935 ENSGT00940000162167 ENSGT01030000235010.e.b ENSGT00940000159444 ENSGT00940000154972 ENSGT00940000161201 ENSGT00940000155374 ENSGT00390000006832 ENSGT00940000160946 Cow MODERN SPECIES 177 MPP1 (ENSBTAG00000013046) ENSBTAG00000033167 F8 (ENSBTAG00000010726) FUNDC2 (ENSBTAG00000016977) CMC4 (ENSBTAG00000007813) MTCP1 (ENSBTAG00000045697) BRCC3 (ENSBTAG00000007817) ENSBTAG00000011144 VBP1 (ENSBTAG00000017265) ENSBTAG00000052586 RAB39B (ENSBTAG00000019779) ENSBTAG00000023978 CLIC2 (ENSBTAG00000010948) TMLHE (ENSBTAG00000011648) SPRY3 (ENSBTAG00000010245) VAMP7 (ENSBTAG00000049615) #22 ZNF185 (ENSBTAG00000005776) NSDHL (ENSBTAG00000009231) CETN2 (ENSBTAG00000007844) GABRQ (ENSBTAG00000013002) ENSBTAG00000048998 GABRA3 (ENSBTAG00000006691) ENSBTAG00000012748 GABRE (ENSBTAG00000013548) CNGA2 (ENSBTAG00000020725) FATE1 (ENSBTAG00000006820) PRRG3 (ENSBTAG00000009775) ENSBTAG00000050821 VMA21 (ENSBTAG00000006296) GPR50 (ENSBTAG00000005950) HMGB3 (ENSBTAG00000005150) Hybrid Bos Indicus MODERN SPECIES 315 FUNDC2 (ENSBIXG00005006322) CMC4 (ENSBIXG00005001057) MTCP1 (ENSBIXG00005011273) BRCC3 (ENSBIXG00005001036) ENSBIXG00005011073 VBP1 (ENSBIXG00005011035) ENSBIXG00005010980 RAB39B (ENSBIXG00005010970) ENSBIXG00005010957 ENSBIXG00005000980 CLIC2 (ENSBIXG00005010938) ENSBIXG00005010929 TMLHE (ENSBIXG00005000964) ENSBIXG00005010854 SPRY3 (ENSBIXG00005010830) VAMP7 (ENSBIXG00005010795) #22 ENSBIXG00005010749 ENSBIXG00005010717 ENSBIXG00005000928 ENSBIXG00005000922 ENSBIXG00005010675 ZNF185 (ENSBIXG00005000655) NSDHL (ENSBIXG00005010561) CETN2 (ENSBIXG00005010528) GABRQ (ENSBIXG00005010442) ENSBIXG00005000879 GABRA3 (ENSBIXG00005001938) MAGEA10 (ENSBIXG00005029058) GABRE (ENSBIXG00005029043) CNGA2 (ENSBIXG00005002074) ENSBIXG00005028994 Cetacea ANCESTRAL SPECIES 19 ENSGT00940000160294 ENSGT00940000163020 ENSGT00390000016992 ENSGT00940000154783.f.d.a ENSGT00390000012647 ENSGT00390000006885.a ENSGT00390000000360.q.a ENSGT00390000000360.r.d ENSGT00950000183068.a.a ENSGT00390000018904 ENSGT00940000158132 ENSGT00940000161397 ENSGT00530000063582.a ENSGT00950000185382 ENSGT00950000183055.a.b ENSGT00510000047733 #22 Blue whale MODERN SPECIES 40 ENSBMSG00010021592 ENSBMSG00010021604 CMC4 (ENSBMSG00010021610) MTCP1 (ENSBMSG00010021613) BRCC3 (ENSBMSG00010021621) ENSBMSG00010021641 VBP1 (ENSBMSG00010021651) RAB39B (ENSBMSG00010021663) ENSBMSG00010021665 ENSBMSG00010021668 CLIC2 (ENSBMSG00010021672) ENSBMSG00010021679 TMLHE (ENSBMSG00010021682) ENSBMSG00010021687 SPRY3 (ENSBMSG00010021692) VAMP7 (ENSBMSG00010021700) #22 Odontoceti ANCESTRAL SPECIES 19 ENSGT00940000160294 ENSGT00940000163020 ENSGT00390000016992 ENSGT00940000154783.f.d.a ENSGT00390000012647 ENSGT00390000006885.a ENSGT00390000000360.q.a ENSGT00390000000360.r.d ENSGT00950000183068.a.a ENSGT00390000018904 ENSGT00940000158132 ENSGT00940000161397 ENSGT00530000063582.a ENSGT00950000185382 ENSGT00950000183055.a.b ENSGT00510000047733 #22 Sperm whale DUPLICATION Sperm whale MODERN SPECIES 12 FUT11 (ENSPCTG00005019182) SEC24C (ENSPCTG00005019137) SYNPO2L (ENSPCTG00005019094) MYOZ1 (ENSPCTG00005019062) USP54 (ENSPCTG00005018794) PPP3CB (ENSPCTG00005018219) ENSPCTG00005018112 ANXA7 (ENSPCTG00005018039) ENSPCTG00005018005 CFAP70 (ENSPCTG00005017829) MRPS16 (ENSPCTG00005017751) DNAJC9 (ENSPCTG00005017690) FAM149B1 (ENSPCTG00005017627) ECD (ENSPCTG00005017574) NUDT13 (ENSPCTG00005017423) ENSPCTG00005017352 #22 P4HA1 (ENSPCTG00005017193) PLA2G12B (ENSPCTG00005017127) OIT3 (ENSPCTG00005016947) ENSPCTG00005016898 MCU (ENSPCTG00005016821) MICU1 (ENSPCTG00005016668) ANAPC16 (ENSPCTG00005016583) ASCC1 (ENSPCTG00005016464) ENSPCTG00005016423 CHST3 (ENSPCTG00005016377) VSIR (ENSPCTG00005016352) C20H10orf105 (ENSPCTG00005016335) ENSPCTG00005016034 SLC29A3 (ENSPCTG00005015832) PCBD1 (ENSPCTG00005015772) Sperm whale MODERN SPECIES 13 F8 (ENSPCTG00005015296) ENSPCTG00005015667 F8A1 (ENSPCTG00005015687) FUNDC2 (ENSPCTG00005015711) CMC4 (ENSPCTG00005015746) MTCP1 (ENSPCTG00005015780) BRCC3 (ENSPCTG00005015822) VBP1 (ENSPCTG00005016073) RAB39B (ENSPCTG00005016182) ENSPCTG00005016223 CLIC2 (ENSPCTG00005016241) ENSPCTG00005016292 TMLHE (ENSPCTG00005016307) ENSPCTG00005016361 SPRY3 (ENSPCTG00005016380) ENSPCTG00005016415 #22 Odontoceti_a ANCESTRAL SPECIES 21 ENSGT00940000160294 ENSGT00940000163020 ENSGT00390000016992 ENSGT00940000154783.f.d.a ENSGT00390000012647 ENSGT00390000006885.a ENSGT00390000000360.q.a ENSGT00390000000360.r.d ENSGT00950000183068.a.a ENSGT00390000018904 ENSGT00940000158132 ENSGT00940000161397 ENSGT00530000063582.a ENSGT00950000185382 ENSGT00950000183055.a.b ENSGT00510000047733 #22 Dolphin MODERN SPECIES 6836 VAMP7 (ENSTTRG00000010643) #22 Odontoceti_b ANCESTRAL SPECIES 17 ENSGT00390000016992.x ENSGT00940000154783.f.d.a ENSGT00390000012647 ENSGT00390000006885.a ENSGT00390000000360.q.a ENSGT00390000000360.r.d ENSGT00950000183068.a.a ENSGT00390000018904 ENSGT00940000158132 ENSGT00390000016992.w ENSGT00940000163020.z ENSGT00940000161397 ENSGT00530000063582.a ENSGT00950000185382 ENSGT00950000183055.a.b ENSGT00510000047733 #22 Monodontidae ANCESTRAL SPECIES 19 ENSGT00940000163020.z ENSGT00390000016992.w ENSGT00940000154783.f.d.a ENSGT00390000012647 ENSGT00390000006885.a ENSGT00390000000360.q.a ENSGT00950000183068.a.a ENSGT00390000018904 ENSGT00940000158132 ENSGT00390000016992.x ENSGT00940000161397 ENSGT00940000163020.y ENSGT00530000063582.a ENSGT00950000185382 ENSGT00950000183055.a.b ENSGT00510000047733 #22 Narwhal MODERN SPECIES 310 F8 (ENSMMNG00015013732) ENSMMNG00015013765 ENSMMNG00015013774 ENSMMNG00015013784 CMC4 (ENSMMNG00015013793) MTCP1 (ENSMMNG00015013799) BRCC3 (ENSMMNG00015013819) ENSMMNG00015013846 VBP1 (ENSMMNG00015013861) RAB39B (ENSMMNG00015013876) CLIC2 (ENSMMNG00015013884) ENSMMNG00015013897 TMLHE (ENSMMNG00015013910) ENSMMNG00015013925 SPRY3 (ENSMMNG00015013931) VAMP7 (ENSMMNG00015013948) #22 DUSP22 (ENSMMNG00015013987) IRF4 (ENSMMNG00015014004) EXOC2 (ENSMMNG00015014030) FOXF2 (ENSMMNG00015014085) FOXC1 (ENSMMNG00015014093) GMDS (ENSMMNG00015014105) ENSMMNG00015010189 MYLK4 (ENSMMNG00015010218) ENSMMNG00015010243 WRNIP1 (ENSMMNG00015010266) ENSMMNG00015010309 NQO2 (ENSMMNG00015010357) RIPK1 (ENSMMNG00015010383) BPHL (ENSMMNG00015010397) TUBB2B (ENSMMNG00015010464) Beluga whale MODERN SPECIES 139 F8 (ENSDLEG00000011690) ENSDLEG00000011965 ENSDLEG00000011977 FUNDC2 (ENSDLEG00000011985) CMC4 (ENSDLEG00000011999) MTCP1 (ENSDLEG00000012008) BRCC3 (ENSDLEG00000012025) ENSDLEG00000012046 VBP1 (ENSDLEG00000012075) RAB39B (ENSDLEG00000012091) ENSDLEG00000012094 CLIC2 (ENSDLEG00000012100) TMLHE (ENSDLEG00000012114) ENSDLEG00000012124 SPRY3 (ENSDLEG00000012130) VAMP7 (ENSDLEG00000012138) #22 Vaquita MODERN SPECIES 34 ENSPSNG00000022476 ENSPSNG00000022480 MTCP1 (ENSPSNG00000022484) CMC4 (ENSPSNG00000013473) BRCC3 (ENSPSNG00000013597) ENSPSNG00000013729 VBP1 (ENSPSNG00000013871) RAB39B (ENSPSNG00000014023) ENSPSNG00000014068 CLIC2 (ENSPSNG00000014084) ENSPSNG00000014126 TMLHE (ENSPSNG00000014201) ENSPSNG00000014251 ENSPSNG00000014269 SPRY3 (ENSPSNG00000014299) VAMP7 (ENSPSNG00000014345) #22 Eulipotyphla ANCESTRAL SPECIES ENSGT00510000047733 #22 Common shrew MODERN SPECIES 1748 VAMP7 (ENSSARG00000004615) #22 Hedgehog MODERN SPECIES 2387 VAMP7 (ENSEEUG00000006561) #22