Sarcopterygii	ANCESTRAL SPECIES	55	ENSGT00940000157765	ENSGT00940000155627	ENSGT00940000158563	ENSGT00940000159782	ENSGT00940000158415	ENSGT00390000015655.a	ENSGT00940000159933	ENSGT00940000164873	ENSGT00390000002144	ENSGT00410000025596.a.b	ENSGT00940000156761	ENSGT00940000167209	ENSGT00940000160504 #18	ENSGT00940000160992 #19	ENSGT00940000165326	ENSGT00940000157034 #22	ENSGT00940000155393.d	ENSGT00940000157669	ENSGT00940000155543	ENSGT00940000157582	ENSGT00390000003312	ENSGT00950000183168.B.a	ENSGT00940000160073	ENSGT00940000163923	ENSGT00940000157554	ENSGT00390000018883	ENSGT00950000182962.b.a	ENSGT01060000248564.b.a.a.a ##10	ENSGT00940000156338	ENSGT00940000160932	ENSGT00940000154868.a.b
Tetrapoda	ANCESTRAL SPECIES	38	ENSGT00940000156213	ENSGT00940000158264.b	ENSGT00530000063698.b	ENSGT00940000157833	ENSGT00960000189438	ENSGT00940000155019.a.a	ENSGT00940000156139	ENSGT00940000164873	ENSGT00390000002144	ENSGT00410000025596.a.b	ENSGT00940000156761	ENSGT00940000167209	ENSGT00940000160504 #18	ENSGT00940000160992 #19	ENSGT00940000165326	ENSGT00940000157034 #22	ENSGT00940000155393.d	ENSGT00940000157669	ENSGT00940000155543	ENSGT00940000157582	ENSGT00390000003312	ENSGT00950000183168.B.a	ENSGT00940000160073	ENSGT00940000163923	ENSGT00940000157554	ENSGT00390000018883	ENSGT00950000182962.b.a	ENSGT01060000248564.b.a.a.a ##10	ENSGT00940000157531	ENSGT00940000159398	ENSGT00940000160932
Amniota	ANCESTRAL SPECIES	47	ENSGT00530000063698.b	ENSGT00940000157833	ENSGT00960000189438	ENSGT00940000155019.a.a	ENSGT00940000156139	ENSGT00940000162094	ENSGT00940000164873	ENSGT00390000002144	ENSGT00410000025596.a.b	ENSGT01100000263839	ENSGT00940000156761	ENSGT00940000167209	ENSGT00940000160504 #18	ENSGT00940000160992 #19	ENSGT00940000161085 #21	ENSGT00940000157034 #22	ENSGT00940000157669	ENSGT00940000155543	ENSGT00940000157582	ENSGT00390000003312	ENSGT00950000183168.B.a
Mammalia	ANCESTRAL SPECIES	19	ENSGT00390000006264	ENSGT00950000183168.B.a	ENSGT00390000003312	ENSGT00940000157582	ENSGT00940000155543	ENSGT00940000156139	ENSGT00940000162094	ENSGT00940000164873	ENSGT00390000002144	ENSGT00410000025596.a.b	ENSGT01100000263839	ENSGT00940000156761	ENSGT00940000160504 #18	ENSGT00940000160992 #19	ENSGT00940000161085 #21	ENSGT00940000157034 #22	ENSGT00940000153587.b #23	ENSGT00940000153511.a #24	ENSGT01010000222287.B.b.a.b.a	ENSGT00950000182852.A.b #26	ENSGT00940000157193 #27	ENSGT00390000007769 #28	ENSGT00390000002053	ENSGT00950000183034.B
Theria	ANCESTRAL SPECIES	16	ENSGT00940000158669	ENSGT00940000154450 #7	ENSGT00530000063881.a.b #8	ENSGT01030000235992	ENSGT01060000248564.a.b #10	ENSGT00440000035378.c #11	ENSGT00940000158484 #12	ENSGT00940000158000 #13	ENSGT00940000156197 #14	ENSGT00490000043398 #15	ENSGT00390000002428.a #16	ENSGT00910000144211.n.b ##17	ENSGT00940000160504 #18	ENSGT00940000160992 #19	ENSGT00940000161085 #21	ENSGT00940000157034 #22	ENSGT00940000153587.b #23	ENSGT00940000153511.a #24	ENSGT01010000222287.B.b.a.b.a	ENSGT00950000182852.A.b #26	ENSGT00940000157193 #27	ENSGT00390000007769 #28	ENSGT00450000040404.a #29	ENSGT00940000155503 #30	ENSGT00940000161091 #31	ENSGT00940000161227 #32	ENSGT00940000162143 #33	ENSGT00940000160469 #34	ENSGT00930000151052 #35	ENSGT00940000159654 #36	ENSGT00940000153675.a.a.b ##37
Eutheria	ANCESTRAL SPECIES		ENSGT00940000154450 #7	ENSGT00530000063881.a.b #8	ENSGT01030000235992	ENSGT01060000248564.a.b #10	ENSGT00440000035378.c #11	ENSGT00940000158484 #12	ENSGT00940000158000 #13	ENSGT00940000156197 #14	ENSGT00490000043398 #15	ENSGT00390000002428.a #16	ENSGT00910000144211.n.a #17	ENSGT00940000162741.i.a	ENSGT00940000160504 #18	ENSGT00940000160992 #19	ENSGT00940000161085 #21	ENSGT00940000157034 #22	ENSGT00940000153587.b #23	ENSGT00940000153511.a #24	ENSGT01010000222287.B.b.a.b.a	ENSGT00950000182852.A.b #26	ENSGT00940000157193 #27	ENSGT00390000007769 #28	ENSGT00450000040404.a #29	ENSGT00940000155503 #30	ENSGT00940000161091 #31	ENSGT00940000161227 #32	ENSGT00940000162143 #33	ENSGT00940000160469 #34	ENSGT00930000151052 #35	ENSGT00940000159654 #36	ENSGT00940000153675.a.a.b.f ##37
Boreoeutheria	ANCESTRAL SPECIES		ENSGT00940000154450 #7	ENSGT00530000063881.a.b #8	ENSGT00990000204354	ENSGT01060000248564.a.b #10	ENSGT00440000035378.c #11	ENSGT00940000158484 #12	ENSGT00940000158000 #13	ENSGT00940000156197 #14	ENSGT00490000043398 #15	ENSGT00390000002428.a.g.a #16	ENSGT00910000144211.n.a #17	ENSGT00940000162741.i.a	ENSGT00940000160504 #18	ENSGT00940000160992 #19	ENSGT00940000161085 #21	ENSGT00940000157034 #22	ENSGT00940000153587.b #23	ENSGT00940000153511.a #24	ENSGT01010000222287.B.b.a.b.a	ENSGT00950000182852.A.b #26	ENSGT00940000157193 #27	ENSGT00390000007769 #28	ENSGT00450000040404.a #29	ENSGT00940000155503 #30	ENSGT00940000161091 #31	ENSGT00940000161227 #32	ENSGT00940000162143 #33	ENSGT00940000160469 #34	ENSGT00930000151052 #35	ENSGT00940000159654 #36	ENSGT00940000153675.a.a.b.f ##37
Euarchontoglires	ANCESTRAL SPECIES		ENSGT00940000158669	ENSGT00940000154450 #7	ENSGT00530000063881.a.b #8	ENSGT00990000204354	ENSGT01060000248564.a.b #10	ENSGT00440000035378.c #11	ENSGT00940000158484 #12	ENSGT00940000158000 #13	ENSGT00940000156197 #14	ENSGT00490000043398 #15	ENSGT00390000002428.a.g.a #16	ENSGT00910000144211.n.a #17	ENSGT00940000160504 #18	ENSGT00940000160992 #19	ENSGT00940000161085 #21	ENSGT00940000157034 #22	ENSGT00940000153587.b #23	ENSGT00940000153511.a #24	ENSGT01010000222287.B.b.a.b.a	ENSGT00950000182852.A.b #26	ENSGT00940000157193 #27	ENSGT00390000007769 #28	ENSGT00450000040404.a #29	ENSGT00940000155503 #30	ENSGT00940000161091 #31	ENSGT00940000161227 #32	ENSGT00940000162143 #33	ENSGT00940000160469 #34	ENSGT00930000151052 #35	ENSGT00940000159654 #36	ENSGT00940000153675.a.a.b.f ##37
Euarchontoglires_A	ANCESTRAL SPECIES		ENSGT00940000158669	ENSGT00940000154450 #7	ENSGT00530000063881.a.b #8	ENSGT00990000204354	ENSGT01060000248564.a.b #10	ENSGT00440000035378.c #11	ENSGT00940000158484 #12	ENSGT00940000158000 #13	ENSGT00940000156197 #14	ENSGT00490000043398 #15	ENSGT00390000002428.a.g.a #16	ENSGT00910000144211.n.a #17	ENSGT00940000160504 #18	ENSGT00940000160992 #19	ENSGT00940000161085 #21	ENSGT00940000157034 #22	ENSGT00940000153587.b #23	ENSGT00940000153511.a #24	ENSGT01010000222287.B.b.a.b.a	ENSGT00950000182852.A.b #26	ENSGT00940000157193 #27	ENSGT00390000007769 #28	ENSGT00450000040404.a #29	ENSGT00940000155503 #30	ENSGT00940000161091 #31	ENSGT00940000161227 #32	ENSGT00940000162143 #33	ENSGT00940000160469 #34	ENSGT00930000151052 #35	ENSGT00940000159654 #36	ENSGT00940000153675.a.a.a.b #37
Glires	ANCESTRAL SPECIES		ENSGT00940000158669	ENSGT00940000154450 #7	ENSGT00530000063881.a.b #8	ENSGT00990000204354	ENSGT01060000248564.a.b #10	ENSGT00440000035378.c #11	ENSGT00940000158484 #12	ENSGT00940000158000 #13	ENSGT00940000156197 #14	ENSGT00490000043398 #15	ENSGT00390000002428.a.g.a #16	ENSGT00910000144211.n.a #17	ENSGT00940000160504 #18	ENSGT00940000160992 #19	ENSGT00940000161085 #21	ENSGT00940000157034 #22	ENSGT00940000153587.b #23	ENSGT00940000153511.a #24	ENSGT01010000222287.B.b.a.b.a	ENSGT00950000182852.A.b #26	ENSGT00940000157193 #27	ENSGT00390000007769 #28	ENSGT00450000040404.a #29	ENSGT00940000155503 #30	ENSGT00940000161091 #31	ENSGT00940000161227 #32	ENSGT00940000162143 #33	ENSGT00940000160469 #34	ENSGT00930000151052 #35	ENSGT00940000159654 #36	ENSGT00940000153675.a.a.a.b #37
Rodentia	ANCESTRAL SPECIES		ENSGT00940000158669	ENSGT00940000154450 #7	ENSGT00530000063881.a.b #8	ENSGT00990000204354	ENSGT01060000248564.a.b #10	ENSGT00440000035378.c #11	ENSGT00940000158484 #12	ENSGT00940000158000 #13	ENSGT00940000156197 #14	ENSGT00490000043398 #15	ENSGT00390000002428.a.g.a #16	ENSGT00910000144211.n.a.fb #17	ENSGT00940000160504 #18	ENSGT00940000160992 #19	ENSGT00940000161085 #21	ENSGT00940000157034 #22	ENSGT00940000153587.b #23	ENSGT00940000153511.a #24	ENSGT01010000222287.B.b.a.b.a	ENSGT00950000182852.A.b #26	ENSGT00940000157193 #27	ENSGT00390000007769 #28	ENSGT00450000040404.a #29	ENSGT00940000155503 #30	ENSGT00940000161091 #31	ENSGT00940000161227 #32	ENSGT00940000162143 #33	ENSGT00940000160469 #34	ENSGT00930000151052 #35	ENSGT00940000159654 #36	ENSGT00940000153675.a.a.a.b #37
Rodentia_A	ANCESTRAL SPECIES		ENSGT00940000158669	ENSGT00940000154450 #7	ENSGT00530000063881.a.b #8	ENSGT00990000204354	ENSGT01060000248564.a.b #10	ENSGT00440000035378.c #11	ENSGT00940000158484 #12	ENSGT00940000158000 #13	ENSGT00940000156197 #14	ENSGT00490000043398 #15	ENSGT00390000002428.a.g.a #16	ENSGT00910000144211.n.a.fb #17	ENSGT00940000160504 #18	ENSGT00940000160992 #19	ENSGT00940000161085 #21	ENSGT00940000157034 #22	ENSGT00940000153587.b #23	ENSGT00940000153511.a #24	ENSGT01010000222287.B.b.a.b.a	ENSGT00950000182852.A.b #26	ENSGT00940000157193 #27	ENSGT00390000007769 #28	ENSGT00450000040404.a #29	ENSGT00940000155503 #30	ENSGT00940000161091 #31	ENSGT00940000161227 #32	ENSGT00940000162143 #33	ENSGT00940000160469 #34	ENSGT00930000151052 #35	ENSGT00940000159654 #36	ENSGT00940000153675.a.a.a.b #37
Sciuridae	ANCESTRAL SPECIES	3	ENSGT00940000158669	ENSGT00940000154450 #7	ENSGT00530000063881.a.b #8	ENSGT00990000204354	ENSGT01060000248564.a.b #10	ENSGT00440000035378.c #11	ENSGT00940000158484 #12	ENSGT00940000158000 #13	ENSGT00940000156197 #14	ENSGT00490000043398 #15	ENSGT00390000002428.a.g.a #16	ENSGT00910000144211.n.a.fb #17	ENSGT00940000160504 #18	ENSGT00940000160992 #19	ENSGT00940000161085 #21	ENSGT00940000157034 #22	ENSGT00940000153587.b #23	ENSGT00940000153511.a #24	ENSGT01010000222287.B.b.a.b.a	ENSGT00950000182852.A.b #26	ENSGT00940000157193 #27	ENSGT00390000007769 #28	ENSGT00450000040404.a #29	ENSGT00940000155503 #30	ENSGT00940000161091 #31	ENSGT00940000161227 #32	ENSGT00940000162143 #33	ENSGT00940000160469 #34	ENSGT00930000151052 #35	ENSGT00940000159654 #36	ENSGT00940000153675.a.a.a.b #37
Eurasian red squirrel	MODERN SPECIES		SRSF10 (ENSSVLG00005000670) #7	PNRC2 (ENSSVLG00005000620) #8	ENSSVLG00005000604 #9	CNR2 (ENSSVLG00005000589) #10	FUCA1 (ENSSVLG00005000561) #11	HMGCL (ENSSVLG00005000529) #12	GALE (ENSSVLG00005000509) #13	LYPLA2 (ENSSVLG00005000457) #14	PITHD1 (ENSSVLG00005000416) #15	ELOA (ENSSVLG00005000381) #16	RPL11 (ENSSVLG00005000344) #17	ID3 (ENSSVLG00005000320) #18	E2F2 (ENSSVLG00005000151) #19	ENSSVLG00005000104 #20	ASAP3 (ENSSVLG00005006849) #21	TCEA3 (ENSSVLG00005006814) #22	ZNF436 (ENSSVLG00005006783) #23	HNRNPR (ENSSVLG00005006684) #24	HTR1D (ENSSVLG00005006648) #25	LUZP1 (ENSSVLG00005006625) #26	KDM1A (ENSSVLG00005006528) #27	TEX46 (ENSSVLG00005006473) #28	LACTBL1 (ENSSVLG00005006410) #29	EPHB2 (ENSSVLG00005006141) #30	C1QB (ENSSVLG00005006095) #31	C1QC (ENSSVLG00005006074) #32	C1QA (ENSSVLG00005006048) #33	EPHA8 (ENSSVLG00005005942) #34	ZBTB40 (ENSSVLG00005005776) #35	WNT4 (ENSSVLG00005005714) #36	ENSSVLG00005005628 #37
Marmotini	ANCESTRAL SPECIES		ENSGT00940000158669	ENSGT00940000154450 #7	ENSGT00530000063881.a.b #8	ENSGT00990000204354	ENSGT01060000248564.a.b #10	ENSGT00440000035378.c #11	ENSGT00940000158484 #12	ENSGT00940000158000 #13	ENSGT00940000156197 #14	ENSGT00490000043398 #15	ENSGT00390000002428.a.g.a #16	ENSGT00910000144211.n.a.fb #17	ENSGT00940000160504 #18	ENSGT00940000160992 #19	ENSGT00940000161085 #21	ENSGT00940000157034 #22	ENSGT00940000153587.b #23	ENSGT00940000153511.a #24	ENSGT01010000222287.B.b.a.b.a	ENSGT00950000182852.A.b #26	ENSGT00940000157193 #27	ENSGT00390000007769 #28	ENSGT00450000040404.a #29	ENSGT00940000155503 #30	ENSGT00940000161091 #31	ENSGT00940000161227 #32	ENSGT00940000162143 #33	ENSGT00940000160469 #34	ENSGT00930000151052 #35	ENSGT00940000159654 #36	ENSGT00940000153675.a.a.a.b #37
Marmotini_b	ANCESTRAL SPECIES		ENSGT00940000158669	ENSGT00940000154450 #7	ENSGT00530000063881.a.b #8	ENSGT00990000204354	ENSGT01060000248564.a.b #10	ENSGT00440000035378.c #11	ENSGT00940000158484 #12	ENSGT00940000158000 #13	ENSGT00940000156197 #14	ENSGT00490000043398 #15	ENSGT00390000002428.a.g.a #16	ENSGT00910000144211.n.a.fb #17	ENSGT00940000160504 #18	ENSGT00940000160992 #19	ENSGT00940000161085 #21	ENSGT00940000157034 #22	ENSGT00940000153587.b #23	ENSGT00940000153511.a #24	ENSGT01010000222287.B.b.a.b.a	ENSGT00950000182852.A.b #26	ENSGT00940000157193 #27	ENSGT00390000007769 #28	ENSGT00450000040404.a #29	ENSGT00940000155503 #30	ENSGT00940000161091 #31	ENSGT00940000161227 #32	ENSGT00940000162143 #33	ENSGT00940000160469 #34	ENSGT00930000151052 #35	ENSGT00940000159654 #36	ENSGT00940000153675.a.a.a.b #37
Squirrel	MODERN SPECIES	74	IL22RA1 (ENSSTOG00000001510)	MYOM3 (ENSSTOG00000000934)	SRSF10 (ENSSTOG00000000956) #7	PNRC2 (ENSSTOG00000000953) #8	CNR2 (ENSSTOG00000011946) #10	FUCA1 (ENSSTOG00000011938) #11	HMGCL (ENSSTOG00000011933) #12	GALE (ENSSTOG00000011927) #13	LYPLA2 (ENSSTOG00000011918) #14	PITHD1 (ENSSTOG00000028000) #15	ELOA (ENSSTOG00000023412) #16	ENSSTOG00000011904	ID3 (ENSSTOG00000009584) #18	E2F2 (ENSSTOG00000009576) #19	ASAP3 (ENSSTOG00000009547) #21	TCEA3 (ENSSTOG00000021068) #22	ZNF436 (ENSSTOG00000001212) #23	HNRNPR (ENSSTOG00000021981) #24	ENSSTOG00000006804	LUZP1 (ENSSTOG00000022904) #26	KDM1A (ENSSTOG00000002451) #27	LACTBL1 (ENSSTOG00000023903) #29	EPHB2 (ENSSTOG00000015377) #30	C1QB (ENSSTOG00000023153) #31	C1QC (ENSSTOG00000030103) #32	C1QA (ENSSTOG00000034210) #33	EPHA8 (ENSSTOG00000008929) #34	ZBTB40 (ENSSTOG00000009598) #35	WNT4 (ENSSTOG00000000806) #36	ENSSTOG00000000805 #37	ENSSTOG00000028853
Arctic ground squirrel	MODERN SPECIES	294	MYOM3 (ENSUPAG00010021069)	SRSF10 (ENSUPAG00010021046) #7	PNRC2 (ENSUPAG00010021043) #8	ENSUPAG00010021041	CNR2 (ENSUPAG00010021037) #10	FUCA1 (ENSUPAG00010021031) #11	HMGCL (ENSUPAG00010021020) #12	GALE (ENSUPAG00010021009) #13	LYPLA2 (ENSUPAG00010021003) #14	PITHD1 (ENSUPAG00010020991) #15	ELOA (ENSUPAG00010020981) #16	RPL11 (ENSUPAG00010020974) #17	ID3 (ENSUPAG00010020971) #18	E2F2 (ENSUPAG00010020963) #19	ASAP3 (ENSUPAG00010020955) #21	TCEA3 (ENSUPAG00010020944) #22	ZNF436 (ENSUPAG00010020939) #23	HNRNPR (ENSUPAG00010020927) #24	ENSUPAG00010020922	LUZP1 (ENSUPAG00010020907) #26	KDM1A (ENSUPAG00010020880) #27	TEX46 (ENSUPAG00010020875) #28	LACTBL1 (ENSUPAG00010020863) #29	EPHB2 (ENSUPAG00010020830) #30	C1QB (ENSUPAG00010020826) #31	C1QC (ENSUPAG00010020824) #32	C1QA (ENSUPAG00010020820) #33	EPHA8 (ENSUPAG00010020808) #34	ZBTB40 (ENSUPAG00010020801) #35	WNT4 (ENSUPAG00010020796) #36	ENSUPAG00010020784 #37
Alpin marmot	MODERN SPECIES	15	MYOM3 (ENSMMMG00000018557)	SRSF10 (ENSMMMG00000018592) #7	PNRC2 (ENSMMMG00000018622) #8	ENSMMMG00000018624	CNR2 (ENSMMMG00000018629) #10	FUCA1 (ENSMMMG00000018637) #11	HMGCL (ENSMMMG00000018659) #12	GALE (ENSMMMG00000018757) #13	LYPLA2 (ENSMMMG00000018761) #14	PITHD1 (ENSMMMG00000018765) #15	ELOA (ENSMMMG00000018774) #16	RPL11 (ENSMMMG00000018781) #17	ID3 (ENSMMMG00000018787) #18	E2F2 (ENSMMMG00000018795) #19	ASAP3 (ENSMMMG00000018861) #21	TCEA3 (ENSMMMG00000018885) #22	ZNF436 (ENSMMMG00000018891) #23	HNRNPR (ENSMMMG00000018898) #24	ENSMMMG00000018946	LUZP1 (ENSMMMG00000018950) #26	KDM1A (ENSMMMG00000018957) #27	TEX46 (ENSMMMG00000018999) #28	EPHB2 (ENSMMMG00000019007) #30	C1QB (ENSMMMG00000019024) #31	C1QC (ENSMMMG00000019028) #32	C1QA (ENSMMMG00000019033) #33	ZBTB40 (ENSMMMG00000019071) #35	WNT4 (ENSMMMG00000019083) #36	CDC42 (ENSMMMG00000019087) #37	ENSMMMG00000019100	ENSMMMG00000019118
Hystricomorpha	DUPLICATION
Hystricomorpha	ANCESTRAL SPECIES	4	ENSGT00940000161366	ENSGT00940000158669	ENSGT00940000154450.lc #7	ENSGT00530000063881.a.b #8	ENSGT01060000248564.a.b #10	ENSGT00440000035378.c #11	ENSGT00940000158484 #12	ENSGT00940000158000 #13	ENSGT00940000156197 #14	ENSGT00490000043398 #15	ENSGT00390000002428.a.g.a #16	ENSGT00910000144211.n.a.fb #17	ENSGT00940000160504 #18	ENSGT00940000160992 #19	ENSGT00940000161085 #21	ENSGT00940000157034.fb #22	ENSGT00940000153587.b #23	ENSGT00940000153511.a #24	ENSGT01010000222287.B.b.a.b.a	ENSGT00950000182852.A.b #26	ENSGT00940000157193 #27	ENSGT00390000007769 #28	ENSGT00450000040404.a #29	ENSGT00940000155503 #30	ENSGT00940000161091 #31	ENSGT00940000161227 #32	ENSGT00940000162143 #33	ENSGT00940000160469 #34	ENSGT00930000151052 #35	ENSGT00940000159654 #36	ENSGT00940000153675.a.a.b.e.a ##37
Naked mole-rat female	MODERN SPECIES	26	ENSHGLG00000033166	SRSF10 (ENSHGLG00000046721) #7	PNRC2 (ENSHGLG00000044854) #8	CNR2 (ENSHGLG00000042644) #10	FUCA1 (ENSHGLG00000011473) #11	HMGCL (ENSHGLG00000015186) #12	GALE (ENSHGLG00000014688) #13	LYPLA2 (ENSHGLG00000011699) #14	PITHD1 (ENSHGLG00000011193) #15	ELOA (ENSHGLG00000010726) #16	ENSHGLG00000048939	RPL11 (ENSHGLG00000046193) #17	ID3 (ENSHGLG00000015126) #18	E2F2 (ENSHGLG00000013011) #19	ASAP3 (ENSHGLG00000011692) #21	TCEA3 (ENSHGLG00000010028) #22	ZNF436 (ENSHGLG00000047527) #23	HNRNPR (ENSHGLG00000013025) #24	ENSHGLG00000035069	ENSHGLG00000049799	LUZP1 (ENSHGLG00000009891) #26	ENSHGLG00000032038	KDM1A (ENSHGLG00000014570) #27	TEX46 (ENSHGLG00000047177) #28	LACTBL1 (ENSHGLG00000018161) #29	EPHB2 (ENSHGLG00000018029) #30	C1QB (ENSHGLG00000016977) #31	C1QC (ENSHGLG00000013065) #32	C1QA (ENSHGLG00000011009) #33	EPHA8 (ENSHGLG00000009876) #34	ZBTB40 (ENSHGLG00000016950) #35
Hystricomorpha_a	ANCESTRAL SPECIES	1	ENSGT00940000161366	ENSGT00940000158669	ENSGT00940000154450.lc #7	ENSGT00530000063881.a.b #8	ENSGT01060000248564.a.b #10	ENSGT00440000035378.c #11	ENSGT00940000158484 #12	ENSGT00940000158000 #13	ENSGT00940000156197 #14	ENSGT00490000043398 #15	ENSGT00390000002428.a.g.a #16	ENSGT00910000144211.n.a.fb #17	ENSGT00940000160504 #18	ENSGT00940000160992 #19	ENSGT00940000161085 #21	ENSGT00940000157034.fb #22	ENSGT00940000153587.b #23	ENSGT00950000182890.B.b.j	ENSGT00940000153511.a #24	ENSGT01010000222287.B.b.a.b.a	ENSGT00950000182852.A.b #26	ENSGT00940000157193 #27	ENSGT00390000007769 #28	ENSGT00450000040404.a #29	ENSGT00940000155503 #30	ENSGT00940000161091 #31	ENSGT00940000161227 #32	ENSGT00940000162143 #33	ENSGT00940000160469 #34	ENSGT00930000151052 #35	ENSGT00940000159654 #36
Guinea pig	MODERN SPECIES	25	IL22RA1 (ENSCPOG00000024764)	MYOM3 (ENSCPOG00000008018)	SRSF10 (ENSCPOG00000034102) #7	PNRC2 (ENSCPOG00000037509) #8	CNR2 (ENSCPOG00000003537) #10	FUCA1 (ENSCPOG00000003535) #11	HMGCL (ENSCPOG00000008645) #12	GALE (ENSCPOG00000031845) #13	LYPLA2 (ENSCPOG00000033750) #14	PITHD1 (ENSCPOG00000008637) #15	ELOA (ENSCPOG00000008632) #16	RPL11 (ENSCPOG00000008432) #17	ID3 (ENSCPOG00000038307) #18	E2F2 (ENSCPOG00000008746) #19	ASAP3 (ENSCPOG00000023338) #21	ENSCPOG00000000504 #22	ENSCPOG00000030412	HNRNPR (ENSCPOG00000040556) #24	ENSCPOG00000032945	LUZP1 (ENSCPOG00000010753) #26	KDM1A (ENSCPOG00000010744) #27	LACTBL1 (ENSCPOG00000022624) #29	EPHB2 (ENSCPOG00000010844) #30	C1QB (ENSCPOG00000008124) #31	C1QC (ENSCPOG00000031590) #32	C1QA (ENSCPOG00000030985) #33	EPHA8 (ENSCPOG00000021134) #34	ZBTB40 (ENSCPOG00000012844) #35	WNT4 (ENSCPOG00000040292) #36	CDC42 (ENSCPOG00000006543) ##37	ENSCPOG00000030052
Hystricomorpha_b	ANCESTRAL SPECIES	7	ENSGT00940000161366	ENSGT00940000158669	ENSGT00940000154450.lc #7	ENSGT00530000063881.a.b #8	ENSGT01060000248564.a.b #10	ENSGT00440000035378.c #11	ENSGT00940000158484 #12	ENSGT00940000158000 #13	ENSGT00940000156197 #14	ENSGT00490000043398 #15	ENSGT00390000002428.a.g.a #16	ENSGT00910000144211.n.a.fb #17	ENSGT00940000160504 #18	ENSGT00940000160992 #19	ENSGT00940000161085 #21	ENSGT00940000157034.fb #22	ENSGT00940000153587.b #23	ENSGT00950000182890.B.b.j	ENSGT00940000153511.a #24	ENSGT01010000222287.B.b.a.b.a	ENSGT00950000182852.A.b #26	ENSGT00940000157193 #27	ENSGT00390000007769 #28	ENSGT00450000040404.a #29	ENSGT00940000155503 #30	ENSGT00940000161091 #31	ENSGT00940000161227 #32	ENSGT00940000162143 #33	ENSGT00940000160469 #34	ENSGT00930000151052 #35	ENSGT00940000159654 #36
Long-tailed chinchilla	MODERN SPECIES	159	IL22RA1 (ENSCLAG00000014220)	MYOM3 (ENSCLAG00000014590)	ENSCLAG00000015555 #7	ENSCLAG00000014105 #8	CNR2 (ENSCLAG00000014048) #10	FUCA1 (ENSCLAG00000013057) #11	HMGCL (ENSCLAG00000013961) #12	GALE (ENSCLAG00000011611) #13	LYPLA2 (ENSCLAG00000010904) #14	PITHD1 (ENSCLAG00000010044) #15	ELOA (ENSCLAG00000009140) #16	Rpl11 (ENSCLAG00000012453) #17	ID3 (ENSCLAG00000011715) #18	E2F2 (ENSCLAG00000013943) #19	ASAP3 (ENSCLAG00000009066) #21	ENSCLAG00000013324 #22	ENSCLAG00000013386	HNRNPR (ENSCLAG00000012738) #24	ENSCLAG00000012687	LUZP1 (ENSCLAG00000008774) #26	KDM1A (ENSCLAG00000007181) #27	TEX46 (ENSCLAG00000014987) #28	LACTBL1 (ENSCLAG00000009588) #29	EPHB2 (ENSCLAG00000011252) #30	C1QB (ENSCLAG00000011016) #31	C1QC (ENSCLAG00000009600) #32	C1QA (ENSCLAG00000009255) #33	EPHA8 (ENSCLAG00000014518) #34	ENSCLAG00000011831	ZBTB40 (ENSCLAG00000015032) #35	WNT4 (ENSCLAG00000010626) #36
Degu	MODERN SPECIES	133	IL22RA1 (ENSODEG00000015339)	MYOM3 (ENSODEG00000014259)	ENSODEG00000020207	CNR2 (ENSODEG00000014788) #10	FUCA1 (ENSODEG00000013698) #11	HMGCL (ENSODEG00000014361) #12	GALE (ENSODEG00000015082) #13	ENSODEG00000014635 #14	PITHD1 (ENSODEG00000015391) #15	ENSODEG00000014473 #16	ENSODEG00000014098	RPL11 (ENSODEG00000014876) #17	ID3 (ENSODEG00000014895) #18	E2F2 (ENSODEG00000014064) #19	ASAP3 (ENSODEG00000013894) #21	ENSODEG00000014378 #22	ZNF436 (ENSODEG00000014873) #23	ENSODEG00000015161	ENSODEG00000020184	ENSODEG00000020101	LUZP1 (ENSODEG00000014336) #26	KDM1A (ENSODEG00000014755) #27	ENSODEG00000014466	ENSODEG00000014173 #28	LACTBL1 (ENSODEG00000014475) #29	EPHB2 (ENSODEG00000015223) #30	ENSODEG00000020286	C1QB (ENSODEG00000015143) #31	C1QC (ENSODEG00000015249) #32	C1QA (ENSODEG00000016110) #33	EPHA8 (ENSODEG00000014623) #34
Hystricomorpha	ANCESTRAL SPECIES	25	ENSGT00390000016050	ENSGT00940000154956	ENSGT00940000154934.B	ENSGT01050000244827.C.c.a.b	ENSGT00550000075006	ENSGT00950000183061.a.a.b	ENSGT00940000157614.f	ENSGT00940000157257	ENSGT00940000161440	ENSGT00940000161564	ENSGT00390000003602	ENSGT00390000012305.b	ENSGT00610000086058.b	ENSGT00940000158948.b	ENSGT00940000155499	ENSGT00940000157034.gb #22	ENSGT00940000159635	ENSGT00940000162967	ENSGT00390000009484	ENSGT00390000018451	ENSGT00940000158706	ENSGT00390000002316	ENSGT00950000183120.e.b.a.a.a.n	ENSGT00940000156630	ENSGT00390000004952.b	ENSGT00940000155349	ENSGT00950000183026.B	ENSGT00950000183096.a.a.c.b	ENSGT00390000010734.j.p	ENSGT00940000158713	ENSGT00940000164144
Hystricomorpha_a	ANCESTRAL SPECIES	21	ENSGT00390000016050	ENSGT00940000154956	ENSGT00940000154934.B	ENSGT01050000244827.C.c.a.b	ENSGT00550000075006	ENSGT00950000183061.a.a.b	ENSGT00940000157614.f	ENSGT00940000157257	ENSGT00940000161440	ENSGT00940000161564	ENSGT00390000003602	ENSGT00390000012305.b	ENSGT00610000086058.b	ENSGT00940000158948.b	ENSGT00940000155499	ENSGT00940000157034.gb #22	ENSGT00940000159635	ENSGT00940000162967	ENSGT00390000009484	ENSGT00390000018451	ENSGT00940000158706	ENSGT00390000002316	ENSGT00950000183120.e.b.a.a.a.n	ENSGT00940000156630	ENSGT00390000004952.b	ENSGT00940000155349	ENSGT00950000183026.B	ENSGT00950000183096.a.a.c.b	ENSGT00390000010734.j.p	ENSGT00940000158713	ENSGT00940000164144
Guinea pig	MODERN SPECIES	6	SPART (ENSCPOG00000000296)	CCDC169 (ENSCPOG00000037354)	ENSCPOG00000033603	DCLK1 (ENSCPOG00000005030)	NBEA (ENSCPOG00000004513)	RFC3 (ENSCPOG00000008739)	STARD13 (ENSCPOG00000005976)	KL (ENSCPOG00000002058)	PDS5B (ENSCPOG00000033286)	ENSCPOG00000038887	N4BP2L1 (ENSCPOG00000003366)	BRCA2 (ENSCPOG00000005153)	FRY (ENSCPOG00000003917)	RXFP2 (ENSCPOG00000009157)	B3GLCT (ENSCPOG00000007455)	ENSCPOG00000035490 #22	ENSCPOG00000007441	MEDAG (ENSCPOG00000003921)	ALOX5AP (ENSCPOG00000032690)	USPL1 (ENSCPOG00000009937)	HMGB1 (ENSCPOG00000031835)	KATNAL1 (ENSCPOG00000000804)	UBL3 (ENSCPOG00000036242)	SLC7A1 (ENSCPOG00000005590)	ENSCPOG00000005581	SLC46A3 (ENSCPOG00000015460)	POMP (ENSCPOG00000001710)	FLT1 (ENSCPOG00000013357)	PAN3 (ENSCPOG00000013349)	FLT3 (ENSCPOG00000007285)	CDX2 (ENSCPOG00000007276)
Hystricomorpha_b	ANCESTRAL SPECIES	48	ENSGT00390000016050	ENSGT00940000154956	ENSGT00940000154934.B	ENSGT01050000244827.C.c.a.b	ENSGT00550000075006	ENSGT00950000183061.a.a.b	ENSGT00940000157614.f	ENSGT00940000157257	ENSGT00940000161440	ENSGT00940000161564	ENSGT00390000003602	ENSGT00390000012305.b	ENSGT00610000086058.b	ENSGT00940000158948.b	ENSGT00940000155499	ENSGT00940000157034.gb #22	ENSGT00940000159635	ENSGT00940000162967	ENSGT00390000009484	ENSGT00390000018451	ENSGT00940000158706	ENSGT00390000002316	ENSGT00950000183120.e.b.a.a.a.n	ENSGT00940000156630	ENSGT00390000004952.b	ENSGT00940000155349	ENSGT00950000183026.B	ENSGT00950000183096.a.a.c.b	ENSGT00390000010734.j.p	ENSGT00940000158713	ENSGT00940000164144
Degu	MODERN SPECIES	79	MCM5 (ENSODEG00000005912)	ENSODEG00000007112	STARD13 (ENSODEG00000006691)	KL (ENSODEG00000006590)	ENSODEG00000019263	PDS5B (ENSODEG00000006819)	ENSODEG00000006412	N4BP2L2 (ENSODEG00000006521)	ENSODEG00000005727	ENSODEG00000009214	ENSODEG00000007088	ZAR1L (ENSODEG00000005981)	FRY (ENSODEG00000006572)	RXFP2 (ENSODEG00000008146)	B3GLCT (ENSODEG00000005559)	ENSODEG00000019264 #22	HSPH1 (ENSODEG00000005577)	ENSODEG00000006248	MEDAG (ENSODEG00000005967)	ALOX5AP (ENSODEG00000005645)	USPL1 (ENSODEG00000007176)	ENSODEG00000006120	KATNAL1 (ENSODEG00000005926)	UBL3 (ENSODEG00000005571)	ENSODEG00000005438	SLC7A1 (ENSODEG00000005306)	ENSODEG00000005871	ENSODEG00000006635	SLC46A3 (ENSODEG00000006238)	ENSODEG00000005569	ENSODEG00000005111
Long-tailed chinchilla	MODERN SPECIES	138	DCLK1 (ENSCLAG00000006827)	NBEA (ENSCLAG00000005089)	MAB21L1 (ENSCLAG00000017521)	ENSCLAG00000003179	RFC3 (ENSCLAG00000003664)	STARD13 (ENSCLAG00000003814)	KL (ENSCLAG00000004704)	PDS5B (ENSCLAG00000003381)	ENSCLAG00000004607	N4BP2L1 (ENSCLAG00000004721)	BRCA2 (ENSCLAG00000005830)	ZAR1L (ENSCLAG00000004947)	FRY (ENSCLAG00000005912)	RXFP2 (ENSCLAG00000005864)	B3GLCT (ENSCLAG00000003709)	ENSCLAG00000017567 #22	HSPH1 (ENSCLAG00000004472)	ENSCLAG00000004125	TEX26 (ENSCLAG00000005302)	MEDAG (ENSCLAG00000005352)	ALOX5AP (ENSCLAG00000005620)	USPL1 (ENSCLAG00000003130)	HMGB1 (ENSCLAG00000003343)	KATNAL1 (ENSCLAG00000003501)	UBL3 (ENSCLAG00000003772)	SLC7A1 (ENSCLAG00000004045)	ENSCLAG00000004626	GPAM (ENSCLAG00000012305)	TECTB (ENSCLAG00000014020)	ENSCLAG00000003782	ACSL5 (ENSCLAG00000005097)
Naked mole-rat female	DUPLICATION
Naked mole-rat female	MODERN SPECIES	2	PDS5B (ENSHGLG00000006670)	ENSHGLG00000018160	ENSHGLG00000039341	N4BP2L1 (ENSHGLG00000006971)	BRCA2 (ENSHGLG00000008590)	ZAR1L (ENSHGLG00000006253)	ENSHGLG00000041019	ENSHGLG00000009415	ENSHGLG00000036768	ENSHGLG00000009276	ENSHGLG00000002160	ENSHGLG00000006352	ENSHGLG00000018220	ENSHGLG00000047678	ENSHGLG00000013471	ENSHGLG00000039932 #22	HSPH1 (ENSHGLG00000006908)	TEX26 (ENSHGLG00000018916)	MEDAG (ENSHGLG00000037818)	ALOX5AP (ENSHGLG00000013689)	USPL1 (ENSHGLG00000036213)	ENSHGLG00000003352	KATNAL1 (ENSHGLG00000003538)	UBL3 (ENSHGLG00000040587)	ENSHGLG00000033244	ENSHGLG00000019220	ENSHGLG00000013589	ENSHGLG00000012383	ENSHGLG00000039882	SLC46A3 (ENSHGLG00000007999)	ENSHGLG00000008991
Naked mole-rat female	MODERN SPECIES	24	ENSHGLG00000032876	ENSHGLG00000045251	PRCP (ENSHGLG00000036425)	ENSHGLG00000046609	DDIAS (ENSHGLG00000050869)	ENSHGLG00000002759	PCF11 (ENSHGLG00000002473)	ENSHGLG00000002410	ANKRD42 (ENSHGLG00000007952)	ENSHGLG00000014010	ENSHGLG00000043756	ENSHGLG00000046380	ENSHGLG00000042096	DLG2 (ENSHGLG00000004449)	ENSHGLG00000037235	ENSHGLG00000003500 #22	ENSHGLG00000003233	CREBZF (ENSHGLG00000003083)	CCDC89 (ENSHGLG00000037872)	ENSHGLG00000002340	CCDC83 (ENSHGLG00000036065)	PICALM (ENSHGLG00000001052)	ENSHGLG00000001667	EED (ENSHGLG00000001511)	ENSHGLG00000041908	CCDC81 (ENSHGLG00000001095)	ENSHGLG00000038302	ENSHGLG00000001103	ME3 (ENSHGLG00000001044)	ENSHGLG00000000902	PRSS23 (ENSHGLG00000047569)
Rodentia_B	ANCESTRAL SPECIES		ENSGT00940000158669	ENSGT00940000154450 #7	ENSGT00530000063881.a.b #8	ENSGT00990000204354	ENSGT01060000248564.a.b #10	ENSGT00440000035378.c #11	ENSGT00940000158484 #12	ENSGT00940000158000 #13	ENSGT00940000156197 #14	ENSGT00490000043398 #15	ENSGT00390000002428.a.g.a #16	ENSGT00910000144211.n.a.fb #17	ENSGT00940000160504 #18	ENSGT00940000160992 #19	ENSGT00940000161085 #21	ENSGT00940000157034 #22	ENSGT00940000153587.b #23	ENSGT00940000153511.a #24	ENSGT01010000222287.B.b.a.b.a	ENSGT00950000182852.A.b #26	ENSGT00940000157193 #27	ENSGT00390000007769 #28	ENSGT00450000040404.a #29	ENSGT00940000155503 #30	ENSGT00940000161091 #31	ENSGT00940000161227 #32	ENSGT00940000162143 #33	ENSGT00940000160469 #34	ENSGT00930000151052 #35	ENSGT00940000159654 #36	ENSGT00940000153675.a.a.a.b #37
Myomorpha	ANCESTRAL SPECIES	3	ENSGT00940000158669	ENSGT00940000154450 #7	ENSGT00530000063881.a.b #8	ENSGT00990000204354	ENSGT01060000248564.a.b #10	ENSGT00440000035378.c #11	ENSGT00940000158484 #12	ENSGT00940000158000 #13	ENSGT00940000156197 #14	ENSGT00490000043398 #15	ENSGT00390000002428.a.g.a #16	ENSGT00910000144211.n.a.fb #17	ENSGT00940000160504 #18	ENSGT00940000160992 #19	ENSGT00940000161085 #21	ENSGT00940000157034 #22	ENSGT00940000153587.b #23	ENSGT00940000153511.a #24	ENSGT01010000222287.B.b.a.b.a	ENSGT00950000182852.A.b #26	ENSGT00940000157193 #27	ENSGT00390000007769 #28	ENSGT00450000040404.a #29	ENSGT00940000155503 #30	ENSGT00940000161091 #31	ENSGT00940000161227 #32	ENSGT00940000162143 #33	ENSGT00940000160469 #34	ENSGT00930000151052 #35	ENSGT00940000159654 #36	ENSGT00940000153675.a.a.a.b #37
Muroidea	ANCESTRAL SPECIES	3	ENSGT00940000158669	ENSGT00940000154450 #7	ENSGT00530000063881.a.b #8	ENSGT00990000204354	ENSGT01060000248564.a.b #10	ENSGT00440000035378.c #11	ENSGT00940000158484 #12	ENSGT00940000158000 #13	ENSGT00940000156197 #14	ENSGT00490000043398 #15	ENSGT00390000002428.a.g.a #16	ENSGT00910000144211.n.a.fb #17	ENSGT00940000160504 #18	ENSGT00940000160992 #19	ENSGT00940000161085 #21	ENSGT00940000157034 #22	ENSGT00940000153587.b #23	ENSGT00940000153511.a #24	ENSGT01010000222287.B.b.a.b.a	ENSGT00950000182852.A.b #26	ENSGT00940000157193 #27	ENSGT00390000007769 #28	ENSGT00450000040404.a #29	ENSGT00940000155503 #30	ENSGT00940000161091 #31	ENSGT00940000161227 #32	ENSGT00940000162143 #33	ENSGT00940000160469 #34	ENSGT00930000151052 #35	ENSGT00940000159654 #36	ENSGT00940000153675.a.a.a.b #37
Muroidea_A	ANCESTRAL SPECIES	3	ENSGT00940000158669	ENSGT00940000154450 #7	ENSGT00530000063881.a.b #8	ENSGT00990000204354	ENSGT01060000248564.a.b #10	ENSGT00440000035378.c #11	ENSGT00940000158484 #12	ENSGT00940000158000 #13	ENSGT00940000156197 #14	ENSGT00490000043398 #15	ENSGT00390000002428.a.g.a #16	ENSGT00910000144211.n.a.fb #17	ENSGT00940000160504 #18	ENSGT00940000160992 #19	ENSGT00940000161085 #21	ENSGT00940000157034 #22	ENSGT00940000153587.b #23	ENSGT00940000153511.a #24	ENSGT01010000222287.B.b.a.b.a	ENSGT00860000135869	ENSGT00950000182852.A.b #26	ENSGT00940000157193 #27	ENSGT00390000007769 #28	ENSGT00450000040404.a #29	ENSGT00940000155503 #30	ENSGT00940000161091 #31	ENSGT00940000161227 #32	ENSGT00940000162143 #33	ENSGT00940000160469 #34	ENSGT00930000151052 #35	ENSGT00940000159654 #36
Cricetidae	ANCESTRAL SPECIES	2	ENSGT00940000158669	ENSGT00940000154450 #7	ENSGT00530000063881.a.b #8	ENSGT00990000204354	ENSGT01060000248564.a.b #10	ENSGT00440000035378.c #11	ENSGT00940000158484 #12	ENSGT00940000158000 #13	ENSGT00940000156197 #14	ENSGT00490000043398 #15	ENSGT00390000002428.a.g.a #16	ENSGT00910000144211.n.a.fb #17	ENSGT00940000160504 #18	ENSGT00940000160992 #19	ENSGT00940000161085 #21	ENSGT00940000157034 #22	ENSGT00940000153587.b #23	ENSGT00940000153511.a #24	ENSGT01010000222287.B.b.a.b.a	ENSGT00860000135869	ENSGT00950000182852.A.b #26	ENSGT00940000157193 #27	ENSGT00390000007769 #28	ENSGT00450000040404.a #29	ENSGT00940000155503 #30	ENSGT00940000161091 #31	ENSGT00940000161227 #32	ENSGT00940000162143 #33	ENSGT00940000160469 #34	ENSGT00930000151052 #35	ENSGT00940000159654 #36
Cricetinae	ANCESTRAL SPECIES	5	ENSGT00940000161366	ENSGT00940000158669	ENSGT00940000154450 #7	ENSGT00530000063881.a.b #8	ENSGT00990000204354	ENSGT01060000248564.a.b #10	ENSGT00440000035378.c #11	ENSGT00940000158484 #12	ENSGT00940000158000 #13	ENSGT00940000156197 #14	ENSGT00490000043398 #15	ENSGT00390000002428.a.g.a #16	ENSGT00940000160504 #18	ENSGT00940000160992 #19	ENSGT00940000161085 #21	ENSGT00940000157034 #22	ENSGT00940000153587.b #23	ENSGT00940000153511.a #24	ENSGT01010000222287.B.b.a.b.a	ENSGT00860000135869	ENSGT00950000182852.A.b #26	ENSGT00940000157193 #27	ENSGT00390000007769 #28	ENSGT00450000040404.a #29	ENSGT00940000155503 #30	ENSGT00940000161091 #31	ENSGT00940000161227 #32	ENSGT00940000162143 #33	ENSGT00940000160469 #34	ENSGT00930000151052 #35	ENSGT00940000159654 #36
Chinese hamster chok1gshd	MODERN SPECIES	111	Il22ra1 (ENSCGRG00001016910)	Myom3 (ENSCGRG00001025061)	Srsf10 (ENSCGRG00001017946) #7	Pnrc2 (ENSCGRG00001012333) #8	ENSCGRG00001014818	Cnr2 (ENSCGRG00001001683) #10	Fuca1 (ENSCGRG00001023492) #11	Hmgcl (ENSCGRG00001008106) #12	Gale (ENSCGRG00001004708) #13	Lypla2 (ENSCGRG00001024962) #14	Pithd1 (ENSCGRG00001010831) #15	Eloa (ENSCGRG00001020647) #16	Id3 (ENSCGRG00001024231) #18	E2f2 (ENSCGRG00001023971) #19	Asap3 (ENSCGRG00001015362) #21	Tcea3 (ENSCGRG00001016370) #22	Zfp46 (ENSCGRG00001014194) #23	Hnrnpr (ENSCGRG00001012007) #24	Htr1d (ENSCGRG00001001066)	ENSCGRG00001015666	Luzp1 (ENSCGRG00001015729) #26	Kdm1a (ENSCGRG00001017159) #27	Tex46 (ENSCGRG00001023627) #28	Lactbl1 (ENSCGRG00001010932) #29	Ephb2 (ENSCGRG00001024803) #30	C1qb (ENSCGRG00001005823) #31	C1qc (ENSCGRG00001004076) #32	C1qa (ENSCGRG00001024982) #33	Epha8 (ENSCGRG00001024240) #34	Zbtb40 (ENSCGRG00001016016) #35	Wnt4 (ENSCGRG00001013957) #36
Golden Hamster	MODERN SPECIES	726									ENSMAUG00000009505 #15	ENSMAUG00000015589 ##17	ENSMAUG00000010786	Id3 (ENSMAUG00000020929) #18	E2f2 (ENSMAUG00000004295) #19	ENSMAUG00000005430	Asap3 (ENSMAUG00000011596) #21	Tcea3 (ENSMAUG00000018619) #22	Zfp46 (ENSMAUG00000015853) #23	Hnrnpr (ENSMAUG00000013503) #24	Htr1d (ENSMAUG00000015812)	ENSMAUG00000003424	Luzp1 (ENSMAUG00000011708) #26	Kdm1a (ENSMAUG00000018795) #27	Tex46 (ENSMAUG00000013680) #28	Lactbl1 (ENSMAUG00000013696) #29	Ephb2 (ENSMAUG00000010555) #30	C1qb (ENSMAUG00000016429) #31	C1qc (ENSMAUG00000010986) #32	C1qa (ENSMAUG00000012996) #33	Epha8 (ENSMAUG00000021011) #34	Zbtb40 (ENSMAUG00000010466) #35	Wnt4 (ENSMAUG00000011257) #36
Cricetidae_B	ANCESTRAL SPECIES	2	ENSGT00940000158669	ENSGT00940000154450 #7	ENSGT00530000063881.a.b #8	ENSGT00990000204354	ENSGT01060000248564.a.b #10	ENSGT00440000035378.c #11	ENSGT00940000158484 #12	ENSGT00940000158000 #13	ENSGT00940000156197 #14	ENSGT00490000043398 #15	ENSGT00390000002428.a.g.a #16	ENSGT00910000144211.n.a.fb #17	ENSGT00940000160504 #18	ENSGT00940000160992 #19	ENSGT00940000161085 #21	ENSGT00940000157034 #22	ENSGT00940000153587.b #23	ENSGT00940000153511.a #24	ENSGT01010000222287.B.b.a.b.a	ENSGT00860000135869	ENSGT00940000163614	ENSGT00950000182852.A.b #26	ENSGT00940000157193 #27	ENSGT00390000007769 #28	ENSGT00450000040404.a #29	ENSGT00940000155503 #30	ENSGT00940000161091 #31	ENSGT00940000161227 #32	ENSGT00940000162143 #33	ENSGT00940000160469 #34	ENSGT00930000151052 #35
Northern American deer mouse	MODERN SPECIES	11	ENSPEMG00000018087	Srsf10 (ENSPEMG00000025144) #7	Pnrc2 (ENSPEMG00000029931) #8	ENSPEMG00000026104	Cnr2 (ENSPEMG00000029166) #10	Fuca1 (ENSPEMG00000012408) #11	Hmgcl (ENSPEMG00000012287) #12	Gale (ENSPEMG00000012930) #13	Lypla2 (ENSPEMG00000009264) #14	Pithd1 (ENSPEMG00000008471) #15	Eloa (ENSPEMG00000010939) #16	Rpl11 (ENSPEMG00000009906) #17	Id3 (ENSPEMG00000018065) #18	E2f2 (ENSPEMG00000017187) #19	Asap3 (ENSPEMG00000010854) #21	Tcea3 (ENSPEMG00000005770) #22	Zfp46 (ENSPEMG00000028479) #23	ENSPEMG00000005942	Hnrnpr (ENSPEMG00000001783) #24	ENSPEMG00000027229	Htr1d (ENSPEMG00000025951)	ENSPEMG00000030264	Luzp1 (ENSPEMG00000019107) #26	Kdm1a (ENSPEMG00000019071) #27	Tex46 (ENSPEMG00000006030) #28	Lactbl1 (ENSPEMG00000015668) #29	Ephb2 (ENSPEMG00000014712) #30	C1qb (ENSPEMG00000013227) #31	C1qc (ENSPEMG00000029124) #32	C1qa (ENSPEMG00000015448) #33	Epha8 (ENSPEMG00000012548) #34
Prairie vole	MODERN SPECIES	1	Grhl3 (ENSMOCG00000001299)	Myom3 (ENSMOCG00000020835)	Srsf10 (ENSMOCG00000013656) #7	Pnrc2 (ENSMOCG00000004737) #8	Cnr2 (ENSMOCG00000007690) #10	Fuca1 (ENSMOCG00000018859) #11	Hmgcl (ENSMOCG00000010721) #12	Gale (ENSMOCG00000021243) #13	ENSMOCG00000010122 #14	Pithd1 (ENSMOCG00000015587) #15	Eloa (ENSMOCG00000002082) #16	Rpl11 (ENSMOCG00000021255) #17	Id3 (ENSMOCG00000019889) #18	E2f2 (ENSMOCG00000018023) #19	Asap3 (ENSMOCG00000005373) #21	Tcea3 (ENSMOCG00000020931) #22	Zfp46 (ENSMOCG00000018332) #23	Hnrnpr (ENSMOCG00000013434) #24	ENSMOCG00000004611	ENSMOCG00000004277	Luzp1 (ENSMOCG00000008505) #26	Kdm1a (ENSMOCG00000019521) #27	Lactbl1 (ENSMOCG00000017701) #29	Ephb2 (ENSMOCG00000011093) #30	C1qb (ENSMOCG00000007179) #31	C1qc (ENSMOCG00000008224) #32	C1qa (ENSMOCG00000006901) #33	Epha8 (ENSMOCG00000021776) #34	Zbtb40 (ENSMOCG00000013259) #35	Wnt4 (ENSMOCG00000016876) #36	Cdc42 (ENSMOCG00000014890) #37
Murinae	ANCESTRAL SPECIES	2	ENSGT00940000158669	ENSGT00940000154450 #7	ENSGT00530000063881.a.b #8	ENSGT00990000204354	ENSGT01060000248564.a.b #10	ENSGT00440000035378.c #11	ENSGT00940000158484 #12	ENSGT00940000158000 #13	ENSGT00940000156197 #14	ENSGT00490000043398 #15	ENSGT00390000002428.a.g.a #16	ENSGT00910000144211.n.a.fb #17	ENSGT00940000160504 #18	ENSGT00940000160992 #19	ENSGT00940000161085 #21	ENSGT00940000157034 #22	ENSGT00940000153587.b #23	ENSGT00940000153511.a #24	ENSGT01010000222287.B.b.a.b.a	ENSGT00860000135869	ENSGT00950000182852.A.b #26	ENSGT00940000157193 #27	ENSGT00390000007769 #28	ENSGT00450000040404.a #29	ENSGT00940000155503 #30	ENSGT00940000161091 #31	ENSGT00940000161227 #32	ENSGT00940000162143 #33	ENSGT00940000160469 #34	ENSGT00930000151052 #35	ENSGT00940000159654 #36
Mus	ANCESTRAL SPECIES	3	ENSGT00940000158669	ENSGT00940000154450 #7	ENSGT00530000063881.a.b #8	ENSGT00990000204354	ENSGT01060000248564.a.b #10	ENSGT00440000035378.c #11	ENSGT00940000158484 #12	ENSGT00940000158000 #13	ENSGT00940000156197 #14	ENSGT00490000043398 #15	ENSGT00390000002428.a.g.a #16	ENSGT00910000144211.n.a.fb #17	ENSGT00940000160504 #18	ENSGT00940000160992 #19	ENSGT00940000161085 #21	ENSGT00940000157034 #22	ENSGT00940000153587.b #23	ENSGT00940000153511.a #24	ENSGT01010000222287.B.b.a.b.a	ENSGT00860000135869	ENSGT00950000182852.A.b #26	ENSGT00940000157193 #27	ENSGT00390000007769 #28	ENSGT00450000040404.a #29	ENSGT00940000155503 #30	ENSGT00940000161091 #31	ENSGT00940000161227 #32	ENSGT00940000162143 #33	ENSGT00940000160469 #34	ENSGT00930000151052 #35	ENSGT00940000159654 #36
Mus_A	ANCESTRAL SPECIES	3	ENSGT00940000158669	ENSGT00940000154450 #7	ENSGT00530000063881.a.b #8	ENSGT00990000204354	ENSGT01060000248564.a.b #10	ENSGT00440000035378.c #11	ENSGT00940000158484 #12	ENSGT00940000158000 #13	ENSGT00940000156197 #14	ENSGT00490000043398 #15	ENSGT00390000002428.a.g.a #16	ENSGT00910000144211.n.a.fb #17	ENSGT00940000160504 #18	ENSGT00940000160992 #19	ENSGT00940000161085 #21	ENSGT00940000157034 #22	ENSGT00940000153587.b #23	ENSGT00940000153511.a #24	ENSGT01010000222287.B.b.a.b.a	ENSGT00860000135869	ENSGT00950000182852.A.b #26	ENSGT00940000157193 #27	ENSGT00390000007769 #28	ENSGT00450000040404.a #29	ENSGT00940000155503 #30	ENSGT00940000161091 #31	ENSGT00940000161227 #32	ENSGT00940000162143 #33	ENSGT00940000160469 #34	ENSGT00930000151052 #35	ENSGT00940000159654 #36
Ryukyu mouse	MODERN SPECIES	13	Il22ra1 (MGP_CAROLIEiJ_G0026643)	Myom3 (MGP_CAROLIEiJ_G0026644)	Srsf10 (MGP_CAROLIEiJ_G0026645) #7	Pnrc2 (MGP_CAROLIEiJ_G0026646) #8	Cnr2 (MGP_CAROLIEiJ_G0026647) #10	Fuca1 (MGP_CAROLIEiJ_G0026648) #11	Hmgcl (MGP_CAROLIEiJ_G0026649) #12	Gale (MGP_CAROLIEiJ_G0026650) #13	Lypla2 (MGP_CAROLIEiJ_G0026651) #14	Pithd1 (MGP_CAROLIEiJ_G0026652) #15	Eloa (MGP_CAROLIEiJ_G0026653) #16	MGP_CAROLIEiJ_G0026654 ##17	Id3 (MGP_CAROLIEiJ_G0026655) #18	E2f2 (MGP_CAROLIEiJ_G0026656) #19	Asap3 (MGP_CAROLIEiJ_G0026657) #21	Tcea3 (MGP_CAROLIEiJ_G0026658) #22	MGP_CAROLIEiJ_G0026659 ##23	Hnrnpr (MGP_CAROLIEiJ_G0026660) #24	Htr1d (MGP_CAROLIEiJ_G0026661)	MGP_CAROLIEiJ_G0026662	Luzp1 (MGP_CAROLIEiJ_G0026663) #26	Kdm1a (MGP_CAROLIEiJ_G0026664) #27	Tex46 (MGP_CAROLIEiJ_G0026665) #28	Lactbl1 (MGP_CAROLIEiJ_G0026666) #29	Ephb2 (MGP_CAROLIEiJ_G0026667) #30	C1qb (MGP_CAROLIEiJ_G0026668) #31	C1qc (MGP_CAROLIEiJ_G0026669) #32	C1qa (MGP_CAROLIEiJ_G0026670) #33	Epha8 (MGP_CAROLIEiJ_G0026671) #34	Zbtb40 (MGP_CAROLIEiJ_G0026672) #35	Wnt4 (MGP_CAROLIEiJ_G0026673) #36
Mus_B	ANCESTRAL SPECIES	5	ENSGT00940000158669	ENSGT00940000154450 #7	ENSGT00530000063881.a.b #8	ENSGT00990000204354	ENSGT01060000248564.a.b #10	ENSGT00440000035378.c #11	ENSGT00940000158484 #12	ENSGT00940000158000 #13	ENSGT00940000156197 #14	ENSGT00490000043398 #15	ENSGT00390000002428.a.g.a #16	ENSGT00910000144211.n.a.fb #17	ENSGT00940000160504 #18	ENSGT00940000160992 #19	ENSGT00940000161085 #21	ENSGT00940000157034 #22	ENSGT00940000153587.b #23	ENSGT00940000153511.a #24	ENSGT01010000222287.B.b.a.b.a	ENSGT00860000135869	ENSGT00950000182852.A.b #26	ENSGT00940000157193 #27	ENSGT00390000007769 #28	ENSGT00450000040404.a #29	ENSGT00940000155503 #30	ENSGT00940000161091 #31	ENSGT00940000161227 #32	ENSGT00940000162143 #33	ENSGT00940000160469 #34	ENSGT00930000151052 #35	ENSGT00940000159654 #36
Mouse	MODERN SPECIES	13	Il22ra1 (ENSMUSG00000037157)	Myom3 (ENSMUSG00000037139)	Srsf10 (ENSMUSG00000028676) #7	Pnrc2 (ENSMUSG00000028675) #8	Cnr2 (ENSMUSG00000062585) #10	Fuca1 (ENSMUSG00000028673) #11	Hmgcl (ENSMUSG00000028672) #12	Gale (ENSMUSG00000028671) #13	Lypla2 (ENSMUSG00000028670) #14	Pithd1 (ENSMUSG00000028669) #15	Eloa (ENSMUSG00000028668) #16	Rpl11 (ENSMUSG00000059291) #17	Id3 (ENSMUSG00000007872) #18	E2f2 (ENSMUSG00000018983) #19	Asap3 (ENSMUSG00000036995) #21	Tcea3 (ENSMUSG00000001604) #22	Zfp46 (ENSMUSG00000051351) #23	Hnrnpr (ENSMUSG00000066037) #24	Htr1d (ENSMUSG00000070687)	Luzp1 (ENSMUSG00000001089) #26	Kdm1a (ENSMUSG00000036940) #27	Tex46 (ENSMUSG00000036921) #28	Lactbl1 (ENSMUSG00000070683) #29	Ephb2 (ENSMUSG00000028664) #30	C1qb (ENSMUSG00000036905) #31	C1qc (ENSMUSG00000036896) #32	C1qa (ENSMUSG00000036887) #33	Epha8 (ENSMUSG00000028661) #34	Zbtb40 (ENSMUSG00000060862) #35	Wnt4 (ENSMUSG00000036856) #36	Cdc42 (ENSMUSG00000006699) ##37
Mus_C	ANCESTRAL SPECIES	2	ENSGT00940000158669	ENSGT00940000154450 #7	ENSGT00530000063881.a.b #8	ENSGT00990000204354	ENSGT01060000248564.a.b #10	ENSGT00440000035378.c #11	ENSGT00940000158484 #12	ENSGT00940000158000 #13	ENSGT00940000156197 #14	ENSGT00490000043398 #15	ENSGT00390000002428.a.g.a #16	ENSGT00910000144211.n.a.fb #17	ENSGT00940000160504 #18	ENSGT00940000160992 #19	ENSGT00940000161085 #21	ENSGT00940000157034 #22	ENSGT00940000153587.b #23	ENSGT00940000153511.a #24	ENSGT01010000222287.B.b.a.b.a	ENSGT00860000135869	ENSGT00950000182852.A.b #26	ENSGT00940000157193 #27	ENSGT00390000007769 #28	ENSGT00450000040404.a #29	ENSGT00940000155503 #30	ENSGT00940000161091 #31	ENSGT00940000161227 #32	ENSGT00940000162143 #33	ENSGT00940000160469 #34	ENSGT00930000151052 #35	ENSGT00940000159654 #36
Steppe mouse	MODERN SPECIES	3343	Myom3 (ENSMSIG00000003941)	Srsf10 (ENSMSIG00000004072) #7	Pnrc2 (ENSMSIG00000004244) #8	ENSMSIG00000004251	Cnr2 (ENSMSIG00000004270) #10	ENSMSIG00000004292 #11	Gale (ENSMSIG00000004402) #13	ENSMSIG00000004429 #14	Pithd1 (ENSMSIG00000004467) #15	ENSMSIG00000004478 #16	ENSMSIG00000004514 #17	ENSMSIG00000004560	Id3 (ENSMSIG00000004572) #18	E2f2 (ENSMSIG00000004591) #19	Asap3 (ENSMSIG00000004611) #21	Tcea3 (ENSMSIG00000004673) #22	Zfp46 (ENSMSIG00000004704) #23	Hnrnpr (ENSMSIG00000004715) #24	Htr1d (ENSMSIG00000004838)	ENSMSIG00000004861	Luzp1 (ENSMSIG00000004872) #26	Kdm1a (ENSMSIG00000004881) #27	Tex46 (ENSMSIG00000004994) #28	Lactbl1 (ENSMSIG00000005002) #29	Ephb2 (ENSMSIG00000005017) #30	C1qb (ENSMSIG00000005145) #31	C1qc (ENSMSIG00000005167) #32	C1qa (ENSMSIG00000005180) #33	Epha8 (ENSMSIG00000005187) #34	Zbtb40 (ENSMSIG00000005238) #35	Wnt4 (ENSMSIG00000005334) #36
spretus	MODERN SPECIES	13	Il22ra1 (MGP_SPRETEiJ_G0027623)	Myom3 (MGP_SPRETEiJ_G0027624)	MGP_SPRETEiJ_G0027625 #7	Pnrc2 (MGP_SPRETEiJ_G0027626) #8	Cnr2 (MGP_SPRETEiJ_G0027627) #10	Fuca1 (MGP_SPRETEiJ_G0027628) #11	Hmgcl (MGP_SPRETEiJ_G0027629) #12	Gale (MGP_SPRETEiJ_G0027630) #13	Lypla2 (MGP_SPRETEiJ_G0027631) #14	Pithd1 (MGP_SPRETEiJ_G0027632) #15	Eloa (MGP_SPRETEiJ_G0027633) #16	Rpl11 (MGP_SPRETEiJ_G0027634) #17	Id3 (MGP_SPRETEiJ_G0027635) #18	E2f2 (MGP_SPRETEiJ_G0027636) #19	Asap3 (MGP_SPRETEiJ_G0027637) #21	Tcea3 (MGP_SPRETEiJ_G0027638) #22	Zfp46 (MGP_SPRETEiJ_G0027639) #23	Htr1d (MGP_SPRETEiJ_G0027641)	MGP_SPRETEiJ_G0027642	Luzp1 (MGP_SPRETEiJ_G0027643) #26	Kdm1a (MGP_SPRETEiJ_G0027644) #27	Tex46 (MGP_SPRETEiJ_G0027645) #28	Lactbl1 (MGP_SPRETEiJ_G0027646) #29	Ephb2 (MGP_SPRETEiJ_G0027647) #30	C1qb (MGP_SPRETEiJ_G0027648) #31	C1qc (MGP_SPRETEiJ_G0027649) #32	C1qa (MGP_SPRETEiJ_G0027650) #33	Epha8 (MGP_SPRETEiJ_G0027651) #34	Zbtb40 (MGP_SPRETEiJ_G0027652) #35	Wnt4 (MGP_SPRETEiJ_G0027653) #36	Cdc42 (MGP_SPRETEiJ_G0027654) ##37
Shrew mouse	MODERN SPECIES	19	Il22ra1 (MGP_PahariEiJ_G0028976)	Myom3 (MGP_PahariEiJ_G0028977)	MGP_PahariEiJ_G0028978 #7	Pnrc2 (MGP_PahariEiJ_G0028979) #8	Cnr2 (MGP_PahariEiJ_G0028980) #10	Fuca1 (MGP_PahariEiJ_G0028981) #11	Hmgcl (MGP_PahariEiJ_G0028982) #12	Gale (MGP_PahariEiJ_G0028983) #13	Lypla2 (MGP_PahariEiJ_G0028984) #14	Pithd1 (MGP_PahariEiJ_G0028985) #15	Eloa (MGP_PahariEiJ_G0028986) #16	Rpl11 (MGP_PahariEiJ_G0028987) #17	Id3 (MGP_PahariEiJ_G0028988) #18	E2f2 (MGP_PahariEiJ_G0028989) #19	Asap3 (MGP_PahariEiJ_G0028990) #21	Tcea3 (MGP_PahariEiJ_G0028991) #22	Zfp46 (MGP_PahariEiJ_G0028992) #23	Hnrnpr (MGP_PahariEiJ_G0028993) #24	Htr1d (MGP_PahariEiJ_G0028994)	MGP_PahariEiJ_G0028995	Luzp1 (MGP_PahariEiJ_G0028996) #26	Kdm1a (MGP_PahariEiJ_G0028997) #27	Tex46 (MGP_PahariEiJ_G0028998) #28	Lactbl1 (MGP_PahariEiJ_G0028999) #29	Ephb2 (MGP_PahariEiJ_G0029000) #30	C1qb (MGP_PahariEiJ_G0029001) #31	C1qc (MGP_PahariEiJ_G0029002) #32	C1qa (MGP_PahariEiJ_G0029003) #33	Epha8 (MGP_PahariEiJ_G0029004) #34	Zbtb40 (MGP_PahariEiJ_G0029005) #35	Wnt4 (MGP_PahariEiJ_G0029006) #36
Rat	MODERN SPECIES	15	Pnrc2 (ENSRNOG00000070268) #8	Pnrc2 (ENSRNOG00000009248)	Cnr2 (ENSRNOG00000009260) #10	Fuca1 (ENSRNOG00000009325) #11	Hmgcl (ENSRNOG00000009422) #12	Gale (ENSRNOG00000009712) #13	Lypla2 (ENSRNOG00000010067) #14	Pithd1 (ENSRNOG00000010873) #15	ENSRNOG00000070717	Eloa (ENSRNOG00000010902) #16	Rpl11 (ENSRNOG00000026260) #17	Rpl36-ps3 (ENSRNOG00000060478)	Id3 (ENSRNOG00000026124) #18	E2f2 (ENSRNOG00000047741) #19	Asap3 (ENSRNOG00000049714) #21	Tcea3 (ENSRNOG00000011794) #22	Zfp46 (ENSRNOG00000070170)	Hnrnpr (ENSRNOG00000011910) #24	Htr1d (ENSRNOG00000012038)	Luzp1 (ENSRNOG00000022402) #26	Kdm1a (ENSRNOG00000022372) #27	Tex46 (ENSRNOG00000022257) #28	Lactbl1 (ENSRNOG00000065157) #29	Ephb2 (ENSRNOG00000012531) #30	C1qb (ENSRNOG00000012749) #31	C1qc (ENSRNOG00000012804) #32	C1qa (ENSRNOG00000012807) #33	Epha8 (ENSRNOG00000013036) #34	Zbtb40 (ENSRNOG00000022039) #35	Wnt4 (ENSRNOG00000013166) #36	Cdc42 (ENSRNOG00000013536) ##37
Upper Galilee mountains blind mole rat	MODERN SPECIES	1446	Il22ra1 (ENSNGAG00000015232)	Myom3 (ENSNGAG00000011740)	Srsf10 (ENSNGAG00000000067) #7	Pnrc2 (ENSNGAG00000002697) #8	Cnr2 (ENSNGAG00000014997) #10	Fuca1 (ENSNGAG00000000221) #11	Hmgcl (ENSNGAG00000018763) #12	Gale (ENSNGAG00000017158) #13	Lypla2 (ENSNGAG00000015285) #14	Pithd1 (ENSNGAG00000013429) #15	Eloa (ENSNGAG00000013323) #16	Rpl11 (ENSNGAG00000018109) #17	Id3 (ENSNGAG00000001410) #18	E2f2 (ENSNGAG00000015525) #19	Asap3 (ENSNGAG00000008083) #21	Tcea3 (ENSNGAG00000017123) #22	Zfp46 (ENSNGAG00000014531) #23	Hnrnpr (ENSNGAG00000018973) #24	Htr1d (ENSNGAG00000013390)	ENSNGAG00000011666	Kdm1a (ENSNGAG00000010536) #27	Tex46 (ENSNGAG00000016597) #28	Ephb2 (ENSNGAG00000011224) #30	C1qb (ENSNGAG00000015245) #31	C1qc (ENSNGAG00000014944) #32	C1qa (ENSNGAG00000012795) #33	Epha8 (ENSNGAG00000016355) #34	Zbtb40 (ENSNGAG00000019354) #35	Wnt4 (ENSNGAG00000010862) #36	Cdc42 (ENSNGAG00000002880) ##37	ENSNGAG00000014109
Lesser Egyptian jerboa	MODERN SPECIES	63	Il22ra1 (ENSJJAG00000017430)	Myom3 (ENSJJAG00000001690)	ENSJJAG00000009074 #7	ENSJJAG00000005186 #8	Cnr2 (ENSJJAG00000005102) #10	Fuca1 (ENSJJAG00000012173) #11	Hmgcl (ENSJJAG00000013840) #12	Gale (ENSJJAG00000011124) #13	Lypla2 (ENSJJAG00000006819) #14	Pithd1 (ENSJJAG00000010008) #15	ENSJJAG00000016031 #17	ENSJJAG00000004828	Id3 (ENSJJAG00000010712) #18	E2f2 (ENSJJAG00000013012) #19	Asap3 (ENSJJAG00000010949) #21	Tcea3 (ENSJJAG00000010720) #22	Zfp46 (ENSJJAG00000014588) #23	Hnrnpr (ENSJJAG00000017723) #24	Htr1d (ENSJJAG00000005412)	Luzp1 (ENSJJAG00000015238) #26	Kdm1a (ENSJJAG00000012453) #27	Lactbl1 (ENSJJAG00000015220) #29	Ephb2 (ENSJJAG00000013346) #30	C1qb (ENSJJAG00000017879) #31	C1qc (ENSJJAG00000012870) #32	C1qa (ENSJJAG00000016238) #33	Epha8 (ENSJJAG00000015371) #34	Zbtb40 (ENSJJAG00000018013) #35	Wnt4 (ENSJJAG00000015637) #36	ENSJJAG00000011592 #37	ENSJJAG00000009940
Kangaroo rat	MODERN SPECIES	325	Il22ra1 (ENSDORG00000029927)	Myom3 (ENSDORG00000013358)	Srsf10 (ENSDORG00000024574) #7	Pnrc2 (ENSDORG00000009138) #8	Cnr2 (ENSDORG00000025264) #10	Fuca1 (ENSDORG00000000643) #11	Hmgcl (ENSDORG00000011123) #12	Gale (ENSDORG00000011121) #13	Lypla2 (ENSDORG00000011120) #14	Pithd1 (ENSDORG00000025820) #15	Eloa (ENSDORG00000027293) #16	Rpl11 (ENSDORG00000012496) #17	Id3 (ENSDORG00000006203) #18	E2f2 (ENSDORG00000003554) #19	Asap3 (ENSDORG00000003550) #21	Tcea3 (ENSDORG00000007440) #22	Zfp46 (ENSDORG00000007438) #23	Hnrnpr (ENSDORG00000007435) #24	ENSDORG00000024913 #25	Luzp1 (ENSDORG00000024149) #26	Kdm1a (ENSDORG00000011724) #27	Tex46 (ENSDORG00000027716) #28	Lactbl1 (ENSDORG00000028404) #29	Ephb2 (ENSDORG00000012114) #30	C1qb (ENSDORG00000013748) #31	C1qc (ENSDORG00000024738) #32	C1qa (ENSDORG00000023788) #33	Epha8 (ENSDORG00000014542) #34	Zbtb40 (ENSDORG00000016495) #35	Wnt4 (ENSDORG00000016273) #36	Hspg2 (ENSDORG00000013115)
Lagomorpha	ANCESTRAL SPECIES	21	ENSGT00510000048978	ENSGT00940000161366	ENSGT00940000158669	ENSGT00940000154450 #7	ENSGT00530000063881.a.b #8	ENSGT01060000248564.a.b #10	ENSGT00440000035378.c #11	ENSGT00940000158484 #12	ENSGT00940000158000 #13	ENSGT00940000156197 #14	ENSGT00490000043398 #15	ENSGT00390000002428.a.h ##16	ENSGT00940000160504 #18	ENSGT00940000160992 #19	ENSGT00940000161085 #21	ENSGT00940000157034 #22	ENSGT00940000153511.a #24	ENSGT01010000222287.B.b.a.b.a	ENSGT00950000182852.A.b #26	ENSGT00940000157193 #27	ENSGT00390000007769 #28	ENSGT00450000040404.a #29	ENSGT00940000155503 #30	ENSGT00940000161091 #31	ENSGT00940000161227 #32	ENSGT00940000162143 #33	ENSGT00940000160469 #34	ENSGT00930000151052 #35	ENSGT00940000159654 #36	ENSGT00940000153675.a.a.a.b #37	ENSGT01030000234528.B.b.b.g.a
Rabbit	MODERN SPECIES	4	IFNLR1 (ENSOCUG00000001490)	IL22RA1 (ENSOCUG00000006743)	MYOM3 (ENSOCUG00000006728)	SRSF10 (ENSOCUG00000029326) #7	ENSOCUG00000038691 #8	CNR2 (ENSOCUG00000026372) #10	FUCA1 (ENSOCUG00000006507) #11	LYPLA2 (ENSOCUG00000013660) #14	GALE (ENSOCUG00000013674) #13	PITHD1 (ENSOCUG00000013653) #15	ENSOCUG00000012707 ##16	ID3 (ENSOCUG00000022823) #18	ENSOCUG00000023896 #19	ASAP3 (ENSOCUG00000000227) #21	ENSOCUG00000033142	ENSOCUG00000014063 #22	ENSOCUG00000010670	HNRNPR (ENSOCUG00000006686) #24	ENSOCUG00000011102	LUZP1 (ENSOCUG00000001168) #26	KDM1A (ENSOCUG00000001164) #27	ENSOCUG00000031115 #28	LACTBL1 (ENSOCUG00000022450) #29	EPHB2 (ENSOCUG00000013540) #30	C1QB (ENSOCUG00000015143) #31	C1QC (ENSOCUG00000015138) #32	C1QA (ENSOCUG00000029367) #33	EPHA8 (ENSOCUG00000015119) #34	ZBTB40 (ENSOCUG00000005075) #35	ENSOCUG00000022473 #36	ENSOCUG00000009986 #37
Pika	MODERN SPECIES	876															ENSOPRG00000012450 #21	ENSOPRG00000012432 #22	ENSOPRG00000012417
Tree shrew	MODERN SPECIES	5777																ENSTBEG00000003281 #22	ZNF436 (ENSTBEG00000002827) #23	ENSTBEG00000002251
Primates	ANCESTRAL SPECIES	4	ENSGT00940000158669	ENSGT00940000154450 #7	ENSGT00530000063881.a.b #8	ENSGT01100000263986 #9	ENSGT01060000248564.a.b #10	ENSGT00440000035378.c #11	ENSGT00940000158484 #12	ENSGT00940000158000 #13	ENSGT00940000156197 #14	ENSGT00490000043398 #15	ENSGT00390000002428.a.g.a #16	ENSGT00910000144211.n.a #17	ENSGT00940000160504 #18	ENSGT00940000160992 #19	ENSGT00940000161085 #21	ENSGT00940000157034 #22	ENSGT00940000153587.b #23	ENSGT00940000153511.a #24	ENSGT00940000154484.B.a.b #25	ENSGT00950000182852.A.b #26	ENSGT00940000157193 #27	ENSGT00390000007769 #28	ENSGT00450000040404.a #29	ENSGT00940000155503 #30	ENSGT00940000161091 #31	ENSGT00940000161227 #32	ENSGT00940000162143 #33	ENSGT00940000160469 #34	ENSGT00930000151052 #35	ENSGT00940000159654 #36	ENSGT00940000153675.a.a.b.f ##37
Strepsirrhini	ANCESTRAL SPECIES		ENSGT00940000158669	ENSGT00940000154450 #7	ENSGT00530000063881.a.b.i #8	ENSGT01100000263986 #9	ENSGT01060000248564.a.b #10	ENSGT00440000035378.c #11	ENSGT00940000158484 #12	ENSGT00940000158000 #13	ENSGT00940000156197.w.a #14	ENSGT00490000043398 #15	ENSGT00390000002428.a.g.a #16	ENSGT00910000144211.n.a #17	ENSGT00940000160504 #18	ENSGT00940000160992 #19	ENSGT00940000161085 #21	ENSGT00940000157034 #22	ENSGT00940000153587.b #23	ENSGT00940000153511.a #24	ENSGT01010000222287.B.b.a.b.a	ENSGT00950000182852.A.b #26	ENSGT00940000157193 #27	ENSGT00390000007769 #28	ENSGT00450000040404.a #29	ENSGT00940000155503 #30	ENSGT00940000161091 #31	ENSGT00940000161227 #32	ENSGT00940000162143 #33	ENSGT00940000160469 #34	ENSGT00930000151052 #35	ENSGT00940000159654 #36	ENSGT00940000153675.a.a.b.f ##37
Lemuriformes	ANCESTRAL SPECIES		ENSGT00940000158669	ENSGT00940000154450 #7	ENSGT00530000063881.a.b.i #8	ENSGT01100000263986 #9	ENSGT01060000248564.a.b #10	ENSGT00440000035378.c #11	ENSGT00940000158484 #12	ENSGT00940000158000 #13	ENSGT00940000156197.w.a #14	ENSGT00490000043398 #15	ENSGT00390000002428.a.g.a #16	ENSGT00910000144211.n.a #17	ENSGT00940000160504 #18	ENSGT00940000160992 #19	ENSGT00940000161085 #21	ENSGT00940000157034 #22	ENSGT00940000153587.b #23	ENSGT00940000153511.a #24	ENSGT01010000222287.B.b.a.b.a	ENSGT00950000182852.A.b #26	ENSGT00940000157193 #27	ENSGT00390000007769 #28	ENSGT00450000040404.a #29	ENSGT00940000155503 #30	ENSGT00940000161091 #31	ENSGT00940000161227 #32	ENSGT00940000162143 #33	ENSGT00940000160469 #34	ENSGT00930000151052 #35	ENSGT00940000159654 #36	ENSGT00940000153675.a.a.b.f ##37
Lemuriformes_a	ANCESTRAL SPECIES	7	ENSGT00940000158669	ENSGT00940000154450 #7	ENSGT00530000063881.a.b.i #8	ENSGT01100000263986 #9	ENSGT01060000248564.a.b #10	ENSGT00440000035378.c #11	ENSGT00940000158484 #12	ENSGT00940000158000 #13	ENSGT00940000156197.w.a #14	ENSGT00490000043398 #15	ENSGT00390000002428.a.g.a #16	ENSGT00910000144211.n.a #17	ENSGT00940000160504 #18	ENSGT00940000160992 #19	ENSGT00940000161085 #21	ENSGT00940000157034 #22	ENSGT00940000153587.b #23	ENSGT00940000153511.a #24	ENSGT01010000222287.B.b.a.b.a	ENSGT00950000182852.A.b #26	ENSGT00940000157193 #27	ENSGT00390000007769 #28	ENSGT00450000040404.a #29	ENSGT00940000155503 #30	ENSGT00940000161091 #31	ENSGT00940000161227 #32	ENSGT00940000162143 #33	ENSGT00940000160469 #34	ENSGT00930000151052 #35	ENSGT00940000159654 #36	ENSGT00940000153675.a.a.b.e.a ##37
Coquerels sifaka	MODERN SPECIES	481	ENSPCOG00000020307	IL22RA1 (ENSPCOG00000012770)	MYOM3 (ENSPCOG00000021576)	SRSF10 (ENSPCOG00000022379) #7	ENSPCOG00000018607 #9	FUCA1 (ENSPCOG00000015161) #11	HMGCL (ENSPCOG00000016623) #12	GALE (ENSPCOG00000013051) #13	ENSPCOG00000025740 #14	PITHD1 (ENSPCOG00000013971) #15	ELOA (ENSPCOG00000013663) #16	RPL11 (ENSPCOG00000025449) #17	ID3 (ENSPCOG00000008706) #18	E2F2 (ENSPCOG00000002846) #19	ASAP3 (ENSPCOG00000021852) #21	TCEA3 (ENSPCOG00000001782) #22	ZNF436 (ENSPCOG00000024806) #23	ENSPCOG00000014665	HTR1D (ENSPCOG00000010862) #25	LUZP1 (ENSPCOG00000020802) #26	KDM1A (ENSPCOG00000022311) #27	TEX46 (ENSPCOG00000021993) #28	LACTBL1 (ENSPCOG00000024643) #29	EPHB2 (ENSPCOG00000001598) #30	C1QB (ENSPCOG00000028706) #31	C1QC (ENSPCOG00000018070) #32	C1QA (ENSPCOG00000024922) #33	EPHA8 (ENSPCOG00000020705) #34	ZBTB40 (ENSPCOG00000006905) #35	ENSPCOG00000012183	WNT4 (ENSPCOG00000022822) #36
Greater bamboo lemur	MODERN SPECIES	85																TCEA3 (ENSPSMG00000003431) #22	ZNF436 (ENSPSMG00000003454) #23	HNRNPR (ENSPSMG00000003538) #24	ENSPSMG00000003695	LUZP1 (ENSPSMG00000003696) #26	KDM1A (ENSPSMG00000003976) #27	TEX46 (ENSPSMG00000004256) #28	LACTBL1 (ENSPSMG00000004277) #29	EPHB2 (ENSPSMG00000004396) #30	C1QB (ENSPSMG00000004435) #31	C1QC (ENSPSMG00000004437) #32	C1QA (ENSPSMG00000004445) #33	EPHA8 (ENSPSMG00000004467) #34	ZBTB40 (ENSPSMG00000004581) #35	WNT4 (ENSPSMG00000004650) #36
Mouse lemur	MODERN SPECIES	11	MYOM3 (ENSMICG00000000527)	ENSMICG00000047638 #7	ENSMICG00000029165 #9	ENSMICG00000033993	ENSMICG00000033155	FUCA1 (ENSMICG00000007213) #11	HMGCL (ENSMICG00000005852) #12	GALE (ENSMICG00000005846) #13	LYPLA2 (ENSMICG00000005841) #14	PITHD1 (ENSMICG00000048076) #15	ELOA (ENSMICG00000005828) #16	RPL11 (ENSMICG00000044631) #17	ID3 (ENSMICG00000030561) #18	E2F2 (ENSMICG00000012121) #19	ASAP3 (ENSMICG00000033880) #21	TCEA3 (ENSMICG00000005884) #22	ENSMICG00000005876	HNRNPR (ENSMICG00000000748) #24	LUZP1 (ENSMICG00000034030) #26	ENSMICG00000031953	KDM1A (ENSMICG00000013347) #27	TEX46 (ENSMICG00000037936) #28	LACTBL1 (ENSMICG00000037177) #29	EPHB2 (ENSMICG00000005069) #30	ENSMICG00000008763	EIF4G3 (ENSMICG00000008548)	ECE1 (ENSMICG00000005478)	ALPL (ENSMICG00000013905)	RAP1GAP (ENSMICG00000013741)	USP48 (ENSMICG00000013764)	LDLRAD2 (ENSMICG00000013789)
Haplorrhini	ANCESTRAL SPECIES	1	ENSGT00940000161366	ENSGT00940000158669	ENSGT00940000154450 #7	ENSGT00530000063881.a.b #8	ENSGT01060000248564.a.b #10	ENSGT00440000035378.c #11	ENSGT00940000158484 #12	ENSGT00940000158000 #13	ENSGT00940000156197 #14	ENSGT00490000043398 #15	ENSGT00390000002428.a.g.a #16	ENSGT00910000144211.n.a #17	ENSGT00940000160504 #18	ENSGT00940000160992 #19	ENSGT00940000161085 #21	ENSGT00940000157034 #22	ENSGT00940000153587.b #23	ENSGT00940000153511.a #24	ENSGT00940000154484.B.a.b #25	ENSGT00950000182852.A.b #26	ENSGT00940000157193 #27	ENSGT00390000007769 #28	ENSGT00450000040404.a #29	ENSGT00940000155503 #30	ENSGT00940000161091 #31	ENSGT00940000161227 #32	ENSGT00940000162143 #33	ENSGT00940000160469 #34	ENSGT00930000151052 #35	ENSGT00940000159654 #36	ENSGT00940000153675.a.a.b.f ##37
Tarsier	MODERN SPECIES	5103											ENSTSYG00000034724 #16	ELOA (ENSTSYG00000001349) #17	ID3 (ENSTSYG00000037091) #18	E2F2 (ENSTSYG00000010010) #19	ASAP3 (ENSTSYG00000030069) #21	TCEA3 (ENSTSYG00000014762) #22	ZNF436 (ENSTSYG00000035005) #23	HNRNPR (ENSTSYG00000007424) #24
Simiiformes	ANCESTRAL SPECIES	3	ENSGT00940000161366	ENSGT00940000158669	ENSGT00940000154450 #7	ENSGT00530000063881.a.b #8	ENSGT01060000248564.a.b #10	ENSGT00440000035378.c #11	ENSGT00940000158484 #12	ENSGT00940000158000 #13	ENSGT00940000156197 #14	ENSGT00490000043398 #15	ENSGT00390000002428.a.g.a #16	ENSGT00910000144211.n.a #17	ENSGT00940000160504 #18	ENSGT00940000160992 #19	ENSGT00940000161085 #21	ENSGT00940000157034 #22	ENSGT00940000153587.b #23	ENSGT00940000153511.a #24	ENSGT00940000154484.B.a.b #25	ENSGT00950000182852.A.b #26	ENSGT00940000157193 #27	ENSGT00390000007769 #28	ENSGT00450000040404.a #29	ENSGT00940000155503 #30	ENSGT00940000161091 #31	ENSGT00940000161227 #32	ENSGT00940000162143 #33	ENSGT00940000160469 #34	ENSGT00930000151052 #35	ENSGT00940000159654 #36	ENSGT00940000153675.a.a.b.f ##37
Platyrrhini	ANCESTRAL SPECIES		ENSGT00940000158669	ENSGT00940000154450 #7	ENSGT00530000063881.a.b #8	ENSGT01050000246666	ENSGT01060000248564.a.b #10	ENSGT00440000035378.c #11	ENSGT00940000158484 #12	ENSGT00940000158000 #13	ENSGT00940000156197 #14	ENSGT00490000043398 #15	ENSGT00390000002428.a.g.a #16	ENSGT00910000144211.n.a #17	ENSGT00940000160504 #18	ENSGT00940000160992 #19	ENSGT00940000161085 #21	ENSGT00940000157034 #22	ENSGT00940000153587.b #23	ENSGT00940000153511.a #24	ENSGT00940000154484.B.a.b #25	ENSGT00950000182852.A.b #26	ENSGT00940000157193 #27	ENSGT00390000007769 #28	ENSGT00450000040404.a #29	ENSGT00940000155503 #30	ENSGT00940000161091 #31	ENSGT00940000161227.c #32	ENSGT00940000162143 #33	ENSGT00940000160469 #34	ENSGT00930000151052 #35	ENSGT00940000159654 #36	ENSGT00940000153675.a.a.b.f ##37
Cebidae	ANCESTRAL SPECIES	1	ENSGT00940000158669	ENSGT00940000154450 #7	ENSGT00530000063881.a.b #8	ENSGT01050000246666	ENSGT01060000248564.a.b #10	ENSGT00440000035378.c #11	ENSGT00940000158484 #12	ENSGT00940000158000 #13	ENSGT00940000156197 #14	ENSGT00490000043398 #15	ENSGT00390000002428.a.g.a #16	ENSGT00910000144211.n.a #17	ENSGT00940000160504 #18	ENSGT00940000160992 #19	ENSGT00940000161085 #21	ENSGT00940000157034 #22	ENSGT00940000153587.b #23	ENSGT00940000153511.a #24	ENSGT00940000154484.B.a.b #25	ENSGT00950000182852.A.b #26	ENSGT00940000157193 #27	ENSGT00390000007769 #28	ENSGT00450000040404.a #29	ENSGT00940000155503 #30	ENSGT00940000161091 #31	ENSGT00940000161227.c #32	ENSGT00940000162143 #33	ENSGT00940000160469 #34	ENSGT00930000151052 #35	ENSGT00940000159654 #36	ENSGT00940000153675.a.a.b.f ##37
Marmoset	MODERN SPECIES	19	MYOM3 (ENSCJAG00000020880)	ENSCJAG00000044116 #7	ENSCJAG00000074386 #8	ENSCJAG00000042708	ENSCJAG00000079703	CNR2 (ENSCJAG00000033442) #10	FUCA1 (ENSCJAG00000020898) #11	HMGCL (ENSCJAG00000020903) #12	GALE (ENSCJAG00000020906) #13	LYPLA2 (ENSCJAG00000020914) #14	PITHD1 (ENSCJAG00000020925) #15	ELOA (ENSCJAG00000020934) #16	E2F2 (ENSCJAG00000020962) #19	ID3 (ENSCJAG00000040172) #18	ASAP3 (ENSCJAG00000001861) #21	TCEA3 (ENSCJAG00000001850) #22	ZNF436 (ENSCJAG00000048577) #23	HNRNPR (ENSCJAG00000005512) #24	HTR1D (ENSCJAG00000005598) #25	ENSCJAG00000085845	LUZP1 (ENSCJAG00000005604) #26	ENSCJAG00000005607 #27	TEX46 (ENSCJAG00000045285) #28	LACTBL1 (ENSCJAG00000005691) #29	EPHB2 (ENSCJAG00000005696) #30	C1QB (ENSCJAG00000067396) #31	C1QC (ENSCJAG00000074975) #32	C1QA (ENSCJAG00000065906) #33	EPHA8 (ENSCJAG00000005832) #34	ENSCJAG00000070377	ZBTB40 (ENSCJAG00000005869) #35
Cebidae_a	ANCESTRAL SPECIES		ENSGT00940000161366	ENSGT00940000158669	ENSGT00940000154450 #7	ENSGT00910000147109	ENSGT01050000246666	ENSGT00440000035378.c #11	ENSGT00940000158484 #12	ENSGT00940000158000 #13	ENSGT00940000156197 #14	ENSGT00490000043398 #15	ENSGT00390000002428.a.g.a #16	ENSGT00910000144211.n.a #17	ENSGT00940000160504 #18	ENSGT00940000160992 #19	ENSGT00940000161085 #21	ENSGT00940000157034 #22	ENSGT00940000153587.b #23	ENSGT00940000153511.a #24	ENSGT00940000154484.B.a.b #25	ENSGT00950000182852.A.b #26	ENSGT00940000157193 #27	ENSGT00390000007769 #28	ENSGT00450000040404.a #29	ENSGT00940000155503 #30	ENSGT00940000161091 #31	ENSGT00940000161227.c #32	ENSGT00940000162143 #33	ENSGT00940000160469 #34	ENSGT00930000151052 #35	ENSGT00940000159654 #36	ENSGT00940000153675.a.a.b.e.a ##37
Bolivian squirrel monkey	MODERN SPECIES	110	ENSSBOG00000025293	ENSSBOG00000031058	ENSSBOG00000032675	FUCA1 (ENSSBOG00000029265) #11	HMGCL (ENSSBOG00000021529) #12	GALE (ENSSBOG00000014768) #13	LYPLA2 (ENSSBOG00000035575) #14	PITHD1 (ENSSBOG00000027702) #15	ELOA (ENSSBOG00000024311) #16	RPL11 (ENSSBOG00000020669) #17	ENSSBOG00000031305	ENSSBOG00000019584	ID3 (ENSSBOG00000007869) #18	E2F2 (ENSSBOG00000033281) #19	ASAP3 (ENSSBOG00000027636) #21	TCEA3 (ENSSBOG00000018702) #22	ZNF436 (ENSSBOG00000036244) #23	HNRNPR (ENSSBOG00000026580) #24	HTR1D (ENSSBOG00000009946) #25	LUZP1 (ENSSBOG00000015465) #26	KDM1A (ENSSBOG00000025105) #27	TEX46 (ENSSBOG00000003491) #28	ENSSBOG00000025425 #29	EPHB2 (ENSSBOG00000021226) #30	C1QB (ENSSBOG00000021816) #31	C1QC (ENSSBOG00000012337) #32	C1QA (ENSSBOG00000021423) #33	EPHA8 (ENSSBOG00000022604) #34	ZBTB40 (ENSSBOG00000027235) #35	WNT4 (ENSSBOG00000026862) #36	CDC42 (ENSSBOG00000025711) ##37
Capuchin	MODERN SPECIES	87	IL22RA1 (ENSCCAG00000030616)	MYOM3 (ENSCCAG00000032018)	ENSCCAG00000037165	SRSF10 (ENSCCAG00000022497) #7	ENSCCAG00000037107	FUCA1 (ENSCCAG00000031239) #11	HMGCL (ENSCCAG00000023261) #12	GALE (ENSCCAG00000016761) #13	LYPLA2 (ENSCCAG00000034117) #14	PITHD1 (ENSCCAG00000037816) #15	ELOA (ENSCCAG00000037069) #16	RPL11 (ENSCCAG00000027290) #17	ID3 (ENSCCAG00000037548) #18	E2F2 (ENSCCAG00000020963) #19	ASAP3 (ENSCCAG00000022314) #21	TCEA3 (ENSCCAG00000028769) #22	ZNF436 (ENSCCAG00000032317) #23	HNRNPR (ENSCCAG00000023435) #24	HTR1D (ENSCCAG00000005134) #25	LUZP1 (ENSCCAG00000028925) #26	KDM1A (ENSCCAG00000000162) #27	TEX46 (ENSCCAG00000026619) #28	LACTBL1 (ENSCCAG00000027968) #29	EPHB2 (ENSCCAG00000037780) #30	C1QB (ENSCCAG00000021430) #31	C1QC (ENSCCAG00000028119) #32	C1QA (ENSCCAG00000021523) #33	EPHA8 (ENSCCAG00000036287) #34	ZBTB40 (ENSCCAG00000021093) #35
Mas night monkey	MODERN SPECIES	1281	ENSANAG00000033337 #7	PNRC2 (ENSANAG00000014936) #8	ENSANAG00000027454	ENSANAG00000023498	FUCA1 (ENSANAG00000029483) #11	HMGCL (ENSANAG00000023122) #12	GALE (ENSANAG00000030425) #13	LYPLA2 (ENSANAG00000020894) #14	PITHD1 (ENSANAG00000022584) #15	ELOA (ENSANAG00000029136) #16	ENSANAG00000037822 ##17	ENSANAG00000036245	ID3 (ENSANAG00000029486) #18	E2F2 (ENSANAG00000036065) #19	ASAP3 (ENSANAG00000029202) #21	TCEA3 (ENSANAG00000027641) #22	ZNF436 (ENSANAG00000035299) #23	HNRNPR (ENSANAG00000036315) #24	HTR1D (ENSANAG00000016499) #25	LUZP1 (ENSANAG00000036938) #26	KDM1A (ENSANAG00000026300) #27	TEX46 (ENSANAG00000009283) #28	LACTBL1 (ENSANAG00000027538) #29	EPHB2 (ENSANAG00000027036) #30	C1QB (ENSANAG00000032021) #31	C1QC (ENSANAG00000028417) #32	C1QA (ENSANAG00000028574) #33	ENSANAG00000004229 #34	ZBTB40 (ENSANAG00000010550) #35	WNT4 (ENSANAG00000033305) #36	ENSANAG00000035200 ##37
Catarrhini	ANCESTRAL SPECIES	3	ENSGT00940000154450 #7	ENSGT00940000165247	ENSGT00940000155720.j	ENSGT01060000248564.a.b #10	ENSGT00440000035378.c #11	ENSGT00940000158484 #12	ENSGT00940000158000 #13	ENSGT00940000156197 #14	ENSGT00490000043398 #15	ENSGT00390000002428.a.g.a #16	ENSGT00910000144211.n.a #17	ENSGT00390000000704	ENSGT00940000160504 #18	ENSGT00940000160992 #19	ENSGT00940000161085 #21	ENSGT00940000157034 #22	ENSGT00940000153587.b #23	ENSGT00940000153511.a #24	ENSGT00940000154484.B.a.b #25	ENSGT00950000182852.A.b #26	ENSGT00940000157193 #27	ENSGT00390000007769 #28	ENSGT00450000040404.a #29	ENSGT00940000155503 #30	ENSGT00940000161091 #31	ENSGT00940000161227 #32	ENSGT00940000162143 #33	ENSGT00940000160469 #34	ENSGT00930000151052 #35	ENSGT00940000159654 #36	ENSGT00940000153675.a.a.b.f ##37
Cercopithecidae	ANCESTRAL SPECIES	2	ENSGT00910000147109	ENSGT00940000165247	ENSGT00940000155720.j	ENSGT01060000248564.a.b #10	ENSGT00440000035378.c #11	ENSGT00940000158484 #12	ENSGT00940000158000 #13	ENSGT00940000156197 #14	ENSGT00490000043398 #15	ENSGT00390000002428.a.g.a #16	ENSGT00910000144211.n.a #17	ENSGT00390000000704	ENSGT00940000160504 #18	ENSGT00940000160992 #19	ENSGT00940000161085 #21	ENSGT00940000157034 #22	ENSGT00940000153587.b #23	ENSGT00940000153511.a #24	ENSGT00940000154484.B.a.b #25	ENSGT00950000182852.A.b #26	ENSGT00940000157193 #27	ENSGT00390000007769 #28	ENSGT00450000040404.a #29	ENSGT00940000155503 #30	ENSGT00940000161091 #31	ENSGT00940000161227 #32	ENSGT00940000162143 #33	ENSGT00940000160469 #34	ENSGT00930000151052 #35	ENSGT00390000000696.`b	ENSGT00940000159654 #36
Rhinopithecus	ANCESTRAL SPECIES	80	ENSGT00940000154450 #7	ENSGT00910000147109	ENSGT00940000165247	ENSGT00940000155720.j	ENSGT01060000248564.a.b #10	ENSGT00440000035378.c #11	ENSGT00940000158484 #12	ENSGT00940000158000 #13	ENSGT00940000156197 #14	ENSGT00490000043398 #15	ENSGT00390000002428.a.g.a #16	ENSGT00390000000704	ENSGT00940000160504 #18	ENSGT00940000160992 #19	ENSGT00940000161085 #21	ENSGT00940000157034 #22
Golden snub-nosed monkey	MODERN SPECIES	3019	SRSF10 (ENSRROG00000043248) #7	ENSRROG00000034255	ENSRROG00000033982	ENSRROG00000043600	CNR2 (ENSRROG00000010252) #10	FUCA1 (ENSRROG00000031469) #11	HMGCL (ENSRROG00000040170) #12	GALE (ENSRROG00000042647) #13	LYPLA2 (ENSRROG00000030625) #14	PITHD1 (ENSRROG00000039827) #15	ELOA (ENSRROG00000039917) #16	ENSRROG00000038512	ID3 (ENSRROG00000026138) #18	E2F2 (ENSRROG00000029565) #19	ASAP3 (ENSRROG00000041593) #21	TCEA3 (ENSRROG00000019168) #22	ZNF436 (ENSRROG00000044195) #23	HNRNPR (ENSRROG00000036942) #24
Black snub-nosed monkey	MODERN SPECIES	820	ENSRBIG00000042394	ENSRBIG00000041810	ENSRBIG00000040730	CNR2 (ENSRBIG00000029638) #10	FUCA1 (ENSRBIG00000023857) #11	HMGCL (ENSRBIG00000041225) #12	GALE (ENSRBIG00000022474) #13	LYPLA2 (ENSRBIG00000033370) #14	PITHD1 (ENSRBIG00000035100) #15	ELOA (ENSRBIG00000011360) #16	RPL11 (ENSRBIG00000027604) #17	ENSRBIG00000038585	ID3 (ENSRBIG00000039201) #18	E2F2 (ENSRBIG00000039935) #19	ASAP3 (ENSRBIG00000031176) #21	TCEA3 (ENSRBIG00000031356) #22	ZNF436 (ENSRBIG00000042279) #23	HNRNPR (ENSRBIG00000028640) #24	HTR1D (ENSRBIG00000017300) #25	LUZP1 (ENSRBIG00000034178) #26	KDM1A (ENSRBIG00000039880) #27	TEX46 (ENSRBIG00000039313) #28	LACTBL1 (ENSRBIG00000033393) #29	EPHB2 (ENSRBIG00000044791) #30	C1QB (ENSRBIG00000020453) #31	C1QC (ENSRBIG00000020363) #32	C1QA (ENSRBIG00000036287) #33	EPHA8 (ENSRBIG00000042028) #34	ENSRBIG00000029605	ZBTB40 (ENSRBIG00000034608) #35	ENSRBIG00000037287
Cercopithecinae	ANCESTRAL SPECIES		ENSGT00910000147109	ENSGT00940000165247	ENSGT00940000155720.j	ENSGT01060000248564.a.b #10	ENSGT00440000035378.c #11	ENSGT00940000158484 #12	ENSGT00940000158000 #13	ENSGT00940000156197 #14	ENSGT00490000043398 #15	ENSGT00390000002428.a.g.a #16	ENSGT00910000144211.n.a #17	ENSGT00390000000704	ENSGT00940000160504 #18	ENSGT00940000160992 #19	ENSGT00940000161085 #21	ENSGT00940000157034 #22	ENSGT00940000153587.b #23	ENSGT00940000153511.a #24	ENSGT00940000154484.B.a.b #25	ENSGT00950000182852.A.b #26	ENSGT00940000157193 #27	ENSGT00390000007769 #28	ENSGT00450000040404.a #29	ENSGT00940000155503 #30	ENSGT00940000161091 #31	ENSGT00940000161227 #32	ENSGT00940000162143 #33	ENSGT00940000160469 #34	ENSGT00930000151052 #35	ENSGT00390000000696.`b	ENSGT00940000159654 #36
Cercopithecinae_a	ANCESTRAL SPECIES		ENSGT00910000147109	ENSGT00940000165247	ENSGT00940000155720.j	ENSGT01060000248564.a.b #10	ENSGT00440000035378.c #11	ENSGT00940000158484 #12	ENSGT00940000158000 #13	ENSGT00940000156197 #14	ENSGT00490000043398 #15	ENSGT00390000002428.a.g.a #16	ENSGT00910000144211.n.a #17	ENSGT00390000000704	ENSGT00940000160504 #18	ENSGT00940000160992 #19	ENSGT00940000161085 #21	ENSGT00940000157034 #22	ENSGT00940000153587.b #23	ENSGT00940000153511.a #24	ENSGT00940000154484.B.a.b #25	ENSGT00950000182852.A.b #26	ENSGT00940000157193 #27	ENSGT00390000007769 #28	ENSGT00450000040404.a #29	ENSGT00940000155503 #30	ENSGT00940000161091 #31	ENSGT00940000161227 #32	ENSGT00940000162143 #33	ENSGT00940000160469 #34	ENSGT00930000151052 #35	ENSGT00390000000696.`b	ENSGT00940000159654 #36
Macaca	ANCESTRAL SPECIES		ENSGT00910000147109	ENSGT00940000165247	ENSGT00940000155720.j	ENSGT01060000248564.a.b #10	ENSGT00440000035378.c #11	ENSGT00940000158484 #12	ENSGT00940000158000 #13	ENSGT00940000156197 #14	ENSGT00490000043398 #15	ENSGT00390000002428.a.g.a #16	ENSGT00910000144211.n.a #17	ENSGT00390000000704	ENSGT00940000160504 #18	ENSGT00940000160992 #19	ENSGT00940000161085 #21	ENSGT00940000157034 #22	ENSGT00940000153587.b #23	ENSGT00940000153511.a #24	ENSGT00940000154484.B.a.b #25	ENSGT00950000182852.A.b #26	ENSGT00940000157193 #27	ENSGT00390000007769 #28	ENSGT00450000040404.a #29	ENSGT00940000155503 #30	ENSGT00940000161091 #31	ENSGT00940000161227 #32	ENSGT00940000162143 #33	ENSGT00940000160469 #34	ENSGT00930000151052 #35	ENSGT00390000000696.`b	ENSGT00940000159654 #36
Pig-tailed macaque	MODERN SPECIES	217	SRSF10 (ENSMNEG00000041500) #7	ENSMNEG00000038324	ENSMNEG00000038158	CNR2 (ENSMNEG00000005492) #10	FUCA1 (ENSMNEG00000043698) #11	HMGCL (ENSMNEG00000040518) #12	GALE (ENSMNEG00000042645) #13	LYPLA2 (ENSMNEG00000040849) #14	PITHD1 (ENSMNEG00000044066) #15	ELOA (ENSMNEG00000040000) #16	RPL11 (ENSMNEG00000029303) #17	ENSMNEG00000039013	ID3 (ENSMNEG00000037651) #18	E2F2 (ENSMNEG00000041362) #19	ASAP3 (ENSMNEG00000030421) #21	TCEA3 (ENSMNEG00000043937) #22	ZNF436 (ENSMNEG00000030311) #23	HNRNPR (ENSMNEG00000035841) #24	HTR1D (ENSMNEG00000016027) #25	LUZP1 (ENSMNEG00000040324) #26	KDM1A (ENSMNEG00000036380) #27	TEX46 (ENSMNEG00000042138) #28	LACTBL1 (ENSMNEG00000039133) #29	EPHB2 (ENSMNEG00000041730) #30	C1QB (ENSMNEG00000038237) #31	C1QC (ENSMNEG00000015156) #32	ENSMNEG00000033771	EPHA8 (ENSMNEG00000016192) #34	ZBTB40 (ENSMNEG00000032628) #35	ENSMNEG00000033901	WNT4 (ENSMNEG00000029287) #36
Macaca_a	ANCESTRAL SPECIES		ENSGT00940000158669	ENSGT00940000154450 #7	ENSGT00530000063881.a.b #8	ENSGT01060000248564.a.b #10	ENSGT00440000035378.c #11	ENSGT00940000158484 #12	ENSGT00940000158000 #13	ENSGT00940000156197 #14	ENSGT00490000043398 #15	ENSGT00390000002428.a.g.a #16	ENSGT00940000164709.a.b.b.a.b.b.a.b.a.a.b	ENSGT00940000160504 #18	ENSGT00940000160992 #19	ENSGT01100000263493.a.b.a.a.a.a.a.a.a.b.a.a.a	ENSGT00940000161085 #21	ENSGT00940000157034 #22	ENSGT00940000153587.b #23	ENSGT00940000153511.a #24	ENSGT00940000154484.B.a.b #25	ENSGT00950000182852.A.b #26	ENSGT00940000157193 #27	ENSGT00390000007769 #28	ENSGT00450000040404.a #29	ENSGT00940000155503 #30	ENSGT00940000161091 #31	ENSGT00940000161227 #32	ENSGT00940000162143 #33	ENSGT00940000160469 #34	ENSGT00930000151052 #35	ENSGT00390000000696.`b	ENSGT00940000159654 #36
Rhesus	MODERN SPECIES		MYOM3 (ENSMMUG00000023052)	SRSF10 (ENSMMUG00000038562) #7	PNRC2 (ENSMMUG00000013783) #8	CNR2 (ENSMMUG00000004217) #10	FUCA1 (ENSMMUG00000004216) #11	HMGCL (ENSMMUG00000019548) #12	GALE (ENSMMUG00000019549) #13	LYPLA2 (ENSMMUG00000019551) #14	PITHD1 (ENSMMUG00000019554) #15	ELOA (ENSMMUG00000003173) #16	ENSMMUG00000064079	ID3 (ENSMMUG00000043586) #18	E2F2 (ENSMMUG00000011832) #19	ENSMMUG00000061500	ASAP3 (ENSMMUG00000042021) #21	TCEA3 (ENSMMUG00000010977) #22	ZNF436 (ENSMMUG00000010973) #23	HNRNPR (ENSMMUG00000010970) #24	HTR1D (ENSMMUG00000032222) #25	LUZP1 (ENSMMUG00000045584) #26	KDM1A (ENSMMUG00000009773) #27	TEX46 (ENSMMUG00000058332) #28	LACTBL1 (ENSMMUG00000041482) #29	EPHB2 (ENSMMUG00000023382) #30	C1QB (ENSMMUG00000058486) #31	C1QC (ENSMMUG00000020756) #32	ENSMMUG00000063725	ENSMMUG00000058256	EPHA8 (ENSMMUG00000020754) #34	ZBTB40 (ENSMMUG00000018618) #35	ENSMMUG00000046184
Crab-eating macaque	MODERN SPECIES		MYOM3 (ENSMFAG00000035620)	SRSF10 (ENSMFAG00000046011) #7	PNRC2 (ENSMFAG00000041681) #8	CNR2 (ENSMFAG00000009512) #10	FUCA1 (ENSMFAG00000001050) #11	HMGCL (ENSMFAG00000001549) #12	GALE (ENSMFAG00000001926) #13	LYPLA2 (ENSMFAG00000033593) #14	PITHD1 (ENSMFAG00000002599) #15	ELOA (ENSMFAG00000032306) #16	ENSMFAG00000047831	ID3 (ENSMFAG00000041663) #18	E2F2 (ENSMFAG00000032163) #19	ENSMFAG00000062141	ASAP3 (ENSMFAG00000038006) #21	TCEA3 (ENSMFAG00000044184) #22	HNRNPR (ENSMFAG00000039737) #24	HTR1D (ENSMFAG00000029390) #25	LUZP1 (ENSMFAG00000038318) #26	KDM1A (ENSMFAG00000037505) #27	TEX46 (ENSMFAG00000041849) #28	LACTBL1 (ENSMFAG00000032421) #29	EPHB2 (ENSMFAG00000003479) #30	C1QC (ENSMFAG00000038771) #32	C1QA (ENSMFAG00000037955) #33	EPHA8 (ENSMFAG00000037600) #34	ZBTB40 (ENSMFAG00000043032) #35	BCCIP (ENSMFAG00000036436)	WNT4 (ENSMFAG00000045973) #36	ENSMFAG00000032516 ##37	ENSMFAG00000064051
Cercopithecinae_b	ANCESTRAL SPECIES	1	ENSGT00910000147109	ENSGT00940000165247	ENSGT00940000155720.j	ENSGT01060000248564.a.b #10	ENSGT00440000035378.c #11	ENSGT00940000158484 #12	ENSGT00940000158000 #13	ENSGT00940000156197 #14	ENSGT00490000043398 #15	ENSGT00390000002428.a.g.a #16	ENSGT00910000144211.n.a #17	ENSGT00390000000704	ENSGT00940000160504 #18	ENSGT00940000160992 #19	ENSGT00940000161085 #21	ENSGT00940000157034 #22	ENSGT00940000153587.b #23	ENSGT00940000153511.a #24	ENSGT00940000154484.B.a.b #25	ENSGT00950000182852.A.b #26	ENSGT00940000157193 #27	ENSGT00390000007769 #28	ENSGT00450000040404.a #29	ENSGT00940000155503 #30	ENSGT00940000161091 #31	ENSGT00940000161227 #32	ENSGT00940000162143 #33	ENSGT00940000160469 #34	ENSGT00930000151052 #35	ENSGT00390000000696.`b	ENSGT00940000159654 #36
Olive baboon	MODERN SPECIES		ENSPANG00000021680 #7	ENSPANG00000014462	ENSPANG00000011013	CNR2 (ENSPANG00000025470) #10	FUCA1 (ENSPANG00000006868) #11	ENSPANG00000042847	HMGCL (ENSPANG00000010869) #12	GALE (ENSPANG00000018747) #13	LYPLA2 (ENSPANG00000014433) #14	PITHD1 (ENSPANG00000005407) #15	ELOA (ENSPANG00000020341) #16	ENSPANG00000034922	ID3 (ENSPANG00000047110) #18	E2F2 (ENSPANG00000015167) #19	ASAP3 (ENSPANG00000026395) #21	TCEA3 (ENSPANG00000021436) #22	ZNF436 (ENSPANG00000018160) #23	HNRNPR (ENSPANG00000007691) #24	HTR1D (ENSPANG00000016415) #25	LUZP1 (ENSPANG00000011015) #26	KDM1A (ENSPANG00000017802) #27	TEX46 (ENSPANG00000018824) #28	LACTBL1 (ENSPANG00000018748) #29	EPHB2 (ENSPANG00000017803) #30	C1QB (ENSPANG00000038124) #31	C1QC (ENSPANG00000024089) #32	C1QA (ENSPANG00000043785) #33	EPHA8 (ENSPANG00000018751) #34	ZBTB40 (ENSPANG00000018749) #35	ENSPANG00000040082	WNT4 (ENSPANG00000011826) #36
Cercopithecinae_d	ANCESTRAL SPECIES	1	ENSGT00910000147109	ENSGT00940000165247	ENSGT00940000155720.j	ENSGT01060000248564.a.b #10	ENSGT00440000035378.c #11	ENSGT00940000158484 #12	ENSGT00940000158000 #13	ENSGT00940000156197 #14	ENSGT00490000043398 #15	ENSGT00390000002428.a.g.a #16	ENSGT00910000144211.n.a #17	ENSGT00390000000704	ENSGT00940000160504 #18	ENSGT00940000160992 #19	ENSGT00940000161085 #21	ENSGT00940000157034 #22	ENSGT00940000153587.b #23	ENSGT00940000153511.a #24	ENSGT00940000154484.B.a.b #25	ENSGT00950000182852.A.b #26	ENSGT00940000157193 #27	ENSGT00390000007769 #28	ENSGT00450000040404.a #29	ENSGT00940000155503 #30	ENSGT00940000161091 #31	ENSGT00940000161227 #32	ENSGT00940000162143 #33	ENSGT00940000160469 #34	ENSGT00930000151052 #35	ENSGT00390000000696.`b	ENSGT00940000159654 #36
Drill	MODERN SPECIES	691	ENSMLEG00000016013 #7	ENSMLEG00000032459	ENSMLEG00000029313	CNR2 (ENSMLEG00000005287) #10	FUCA1 (ENSMLEG00000029638) #11	HMGCL (ENSMLEG00000034060) #12	GALE (ENSMLEG00000034355) #13	LYPLA2 (ENSMLEG00000007933) #14	ENSMLEG00000023301 #15	ELOA (ENSMLEG00000043523) #16	RPL11 (ENSMLEG00000032521) #17	ENSMLEG00000030604	ID3 (ENSMLEG00000041663) #18	E2F2 (ENSMLEG00000031550) #19	ASAP3 (ENSMLEG00000030024) #21	TCEA3 (ENSMLEG00000039679) #22	ZNF436 (ENSMLEG00000031510) #23	HNRNPR (ENSMLEG00000010732) #24
Sooty mangabey	MODERN SPECIES	227	SRSF10 (ENSCATG00000031598) #7	ENSCATG00000017417	ENSCATG00000033706	CNR2 (ENSCATG00000006881) #10	FUCA1 (ENSCATG00000030013) #11	HMGCL (ENSCATG00000020396) #12	GALE (ENSCATG00000031776) #13	LYPLA2 (ENSCATG00000031699) #14	PITHD1 (ENSCATG00000031682) #15	ELOA (ENSCATG00000017550) #16	RPL11 (ENSCATG00000021760) #17	ENSCATG00000028499	ID3 (ENSCATG00000027221) #18	E2F2 (ENSCATG00000030020) #19	ASAP3 (ENSCATG00000031223) #21	TCEA3 (ENSCATG00000033613) #22	ZNF436 (ENSCATG00000031469) #23	HNRNPR (ENSCATG00000035305) #24	HTR1D (ENSCATG00000006900) #25	LUZP1 (ENSCATG00000033769) #26	KDM1A (ENSCATG00000035213) #27	TEX46 (ENSCATG00000029908) #28	LACTBL1 (ENSCATG00000035607) #29	EPHB2 (ENSCATG00000036561) #30	C1QB (ENSCATG00000032963) #31	C1QC (ENSCATG00000033253) #32	C1QA (ENSCATG00000031472) #33	EPHA8 (ENSCATG00000032359) #34	ZBTB40 (ENSCATG00000031739) #35	ENSCATG00000028522	WNT4 (ENSCATG00000028581) #36
Vervet Monkey	MODERN SPECIES	12	IL22RA1 (ENSCSAG00000000937)	MYOM3 (ENSCSAG00000000936)	SRSF10 (ENSCSAG00000000935) #7	PNRC2 (ENSCSAG00000000644) #8	CNR2 (ENSCSAG00000000643) #10	HMGCL (ENSCSAG00000000934) #12	GALE (ENSCSAG00000000933) #13	LYPLA2 (ENSCSAG00000000932) #14	PITHD1 (ENSCSAG00000000931) #15	ELOA (ENSCSAG00000000930) #16	RPL11 (ENSCSAG00000000929) #17	ENSCSAG00000000928	ID3 (ENSCSAG00000000927) #18	E2F2 (ENSCSAG00000000926) #19	ASAP3 (ENSCSAG00000000925) #21	TCEA3 (ENSCSAG00000000924) #22	ZNF436 (ENSCSAG00000000923) #23	HNRNPR (ENSCSAG00000000922) #24	HTR1D (ENSCSAG00000000642) #25	LUZP1 (ENSCSAG00000000920) #26	KDM1A (ENSCSAG00000000919) #27	TEX46 (ENSCSAG00000000918) #28	LACTBL1 (ENSCSAG00000000917) #29	EPHB2 (ENSCSAG00000000916) #30	C1QB (ENSCSAG00000000915) #31	C1QC (ENSCSAG00000000914) #32	ENSCSAG00000000913	EPHA8 (ENSCSAG00000000912) #34	ZBTB40 (ENSCSAG00000000911) #35	WNT4 (ENSCSAG00000000910) #36	CDC42 (ENSCSAG00000000909) ##37
Hominoidea	ANCESTRAL SPECIES	3	ENSGT00940000154450 #7	ENSGT00940000165247	ENSGT00940000155720.j	ENSGT01060000248564.a.b #10	ENSGT00440000035378.c #11	ENSGT00940000158484 #12	ENSGT00940000158000 #13	ENSGT00940000156197 #14	ENSGT00490000043398 #15	ENSGT00390000002428.a.g.a #16	ENSGT00910000144211.n.a #17	ENSGT00390000000704	ENSGT00940000160504 #18	ENSGT00940000160992 #19	ENSGT00940000161085 #21	ENSGT00940000157034 #22	ENSGT00940000153587.b #23	ENSGT00940000153511.a #24	ENSGT00940000154484.B.a.b #25	ENSGT00950000182852.A.b #26	ENSGT00940000157193 #27	ENSGT00390000007769 #28	ENSGT00450000040404.a #29	ENSGT00940000155503 #30	ENSGT00940000161091 #31	ENSGT00940000161227 #32	ENSGT00940000162143 #33	ENSGT00940000160469 #34	ENSGT00930000151052 #35	ENSGT00940000159654 #36	ENSGT00940000153675.a.a.b.e.a.h ##37
Hominidae	ANCESTRAL SPECIES	3	ENSGT00530000063881.a.b #8	ENSGT00940000165247	ENSGT00940000155720.j	ENSGT01060000248564.a.b #10	ENSGT00440000035378.c #11	ENSGT00940000158484 #12	ENSGT00940000158000 #13	ENSGT00940000156197.s.a #14	ENSGT00490000043398 #15	ENSGT00390000002428.a.g.a #16	ENSGT00910000144211.n.a #17	ENSGT00390000000704	ENSGT00940000160504 #18	ENSGT00940000160992 #19	ENSGT00940000161085 #21	ENSGT00940000157034 #22	ENSGT00940000153587.b #23	ENSGT00940000153511.a #24	ENSGT00940000154484.B.a.b #25	ENSGT00950000182852.A.b #26	ENSGT00940000157193 #27	ENSGT00390000007769 #28	ENSGT00450000040404.a #29	ENSGT00940000155503 #30	ENSGT00940000161091 #31	ENSGT00940000161227 #32	ENSGT00940000162143 #33	ENSGT00940000160469 #34	ENSGT00930000151052 #35	ENSGT00940000159654 #36	ENSGT00940000153675.a.a.b.f ##37
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	3	ENSGT00530000063881.a.b #8	ENSGT00940000165247	ENSGT00940000155720.j	ENSGT01060000248564.a.b #10	ENSGT00440000035378.c #11	ENSGT00940000158484 #12	ENSGT00940000158000 #13	ENSGT00940000156197.s.a.a #14	ENSGT00490000043398 #15	ENSGT00390000002428.a.g.a #16	ENSGT00910000144211.n.a #17	ENSGT00390000000704	ENSGT00940000160504 #18	ENSGT00940000160992 #19	ENSGT00940000161085 #21	ENSGT00940000157034 #22	ENSGT00940000153587.b #23	ENSGT00940000153511.a #24	ENSGT00940000154484.B.a.b #25	ENSGT00950000182852.A.b #26	ENSGT00940000157193 #27	ENSGT00390000007769 #28	ENSGT00450000040404.a #29	ENSGT00940000155503 #30	ENSGT00940000161091 #31	ENSGT00940000161227 #32	ENSGT00940000162143 #33	ENSGT00940000160469 #34	ENSGT00930000151052 #35	ENSGT00940000159654 #36	ENSGT00940000153675.a.a.b.f ##37
Homo/Pan group	ANCESTRAL SPECIES	4	ENSGT00530000063881.a.b #8	ENSGT00940000165247	ENSGT00940000155720.j	ENSGT01060000248564.a.b #10	ENSGT00440000035378.c #11	ENSGT00940000158484 #12	ENSGT00940000158000 #13	ENSGT00940000156197.s.a.a #14	ENSGT00490000043398 #15	ENSGT00390000002428.a.g.a #16	ENSGT00910000144211.n.a #17	ENSGT00390000000704	ENSGT00940000160504 #18	ENSGT00940000160992 #19	ENSGT00940000161085 #21	ENSGT00940000157034 #22	ENSGT00940000153587.b #23	ENSGT00940000153511.a #24	ENSGT00940000154484.B.a.b #25	ENSGT00950000182852.A.b #26	ENSGT00940000157193 #27	ENSGT00390000007769 #28	ENSGT00450000040404.a #29	ENSGT00940000155503 #30	ENSGT00940000161091 #31	ENSGT00940000161227 #32	ENSGT00940000162143 #33	ENSGT00940000160469 #34	ENSGT00930000151052 #35	ENSGT00940000159654 #36	ENSGT00940000153675.a.a.b.f ##37
Pan	ANCESTRAL SPECIES		ENSGT00940000154450 #7	ENSGT00940000165247	ENSGT00940000155720.j	ENSGT01060000248564.a.b #10	ENSGT00440000035378.c #11	ENSGT00940000158484 #12	ENSGT00940000158000 #13	ENSGT00940000156197.s.a.a #14	ENSGT00490000043398 #15	ENSGT00390000002428.a.g.a #16	ENSGT00910000144211.n.a #17	ENSGT00390000000704	ENSGT00940000160504 #18	ENSGT00940000160992 #19	ENSGT00940000161085 #21	ENSGT00940000157034 #22	ENSGT00940000153587.b #23	ENSGT00940000153511.a #24	ENSGT00940000154484.B.a.b #25	ENSGT00950000182852.A.b #26	ENSGT00940000157193 #27	ENSGT00390000007769 #28	ENSGT00450000040404.a #29	ENSGT00940000155503 #30	ENSGT00940000161091 #31	ENSGT00940000161227 #32	ENSGT00940000162143 #33	ENSGT00940000160469 #34	ENSGT00930000151052 #35	ENSGT00940000159654 #36	ENSGT00940000153675.a.a.b.f ##37
Chimpanzee	MODERN SPECIES		SRSF10 (ENSPTRG00000044753) #7	PNRC2 (ENSPTRG00000022763)	ENSPTRG00000039900	CNR2 (ENSPTRG00000024370) #10	FUCA1 (ENSPTRG00000000340) #11	HMGCL (ENSPTRG00000000339) #12	GALE (ENSPTRG00000000338) #13	LYPLA2 (ENSPTRG00000049841) #14	PITHD1 (ENSPTRG00000000336) #15	ELOA (ENSPTRG00000000335) #16	RPL11 (ENSPTRG00000000334) #17	ENSPTRG00000000332	ID3 (ENSPTRG00000000331) #18	E2F2 (ENSPTRG00000000330) #19	ASAP3 (ENSPTRG00000049339) #21	TCEA3 (ENSPTRG00000023819) #22	ZNF436 (ENSPTRG00000050562) #23	HNRNPR (ENSPTRG00000000324) #24	HTR1D (ENSPTRG00000000323) #25	LUZP1 (ENSPTRG00000000322) #26	KDM1A (ENSPTRG00000000321) #27	TEX46 (ENSPTRG00000048035) #28	LACTBL1 (ENSPTRG00000045299) #29	EPHB2 (ENSPTRG00000000320) #30	C1QB (ENSPTRG00000043586) #31	C1QC (ENSPTRG00000000319) #32	C1QA (ENSPTRG00000000318) #33	EPHA8 (ENSPTRG00000000316) #34	ZBTB40 (ENSPTRG00000000315) #35	WNT4 (ENSPTRG00000052708) #36	CDC42 (ENSPTRG00000051031) ##37
Bonobo	MODERN SPECIES		SRSF10 (ENSPPAG00000032557) #7	ENSPPAG00000041814	ENSPPAG00000043708	CNR2 (ENSPPAG00000013056) #10	FUCA1 (ENSPPAG00000040238) #11	HMGCL (ENSPPAG00000035201) #12	GALE (ENSPPAG00000013178) #13	LYPLA2 (ENSPPAG00000019643) #14	PITHD1 (ENSPPAG00000030752) #15	ELOA (ENSPPAG00000005766) #16	RPL11 (ENSPPAG00000032945) #17	ENSPPAG00000040897	ID3 (ENSPPAG00000011462) #18	E2F2 (ENSPPAG00000041397) #19	ASAP3 (ENSPPAG00000031178) #21	TCEA3 (ENSPPAG00000043969) #22	ZNF436 (ENSPPAG00000037405) #23	HNRNPR (ENSPPAG00000040797) #24	HTR1D (ENSPPAG00000015499) #25	LUZP1 (ENSPPAG00000041932) #26	KDM1A (ENSPPAG00000042062) #27	TEX46 (ENSPPAG00000036417) #28	LACTBL1 (ENSPPAG00000039301) #29	EPHB2 (ENSPPAG00000032919) #30	C1QB (ENSPPAG00000039218) #31	C1QC (ENSPPAG00000027943) #32	EPHA8 (ENSPPAG00000040764) #34	ZBTB40 (ENSPPAG00000034112) #35	WNT4 (ENSPPAG00000009237) #36	ENSPPAG00000031108 ##37	ENSPPAG00000043001
Human	MODERN SPECIES		IL22RA1 (ENSG00000142677)	MYOM3 (ENSG00000142661)	SRSF10 (ENSG00000188529) #7	PNRC2 (ENSG00000189266) #8	CNR2 (ENSG00000188822) #10	FUCA1 (ENSG00000179163) #11	HMGCL (ENSG00000117305) #12	GALE (ENSG00000117308) #13	LYPLA2 (ENSG00000011009) #14	PITHD1 (ENSG00000057757) #15	ELOA (ENSG00000011007) #16	RPL11 (ENSG00000142676) #17	ID3 (ENSG00000117318) #18	E2F2 (ENSG00000007968) #19	ASAP3 (ENSG00000088280) #21	TCEA3 (ENSG00000204219) #22	ZNF436 (ENSG00000125945) #23	HNRNPR (ENSG00000125944) #24	HTR1D (ENSG00000179546) #25	LUZP1 (ENSG00000169641) #26	KDM1A (ENSG00000004487) #27	TEX46 (ENSG00000227868) #28	LACTBL1 (ENSG00000215906) #29	EPHB2 (ENSG00000133216) #30	C1QB (ENSG00000173369) #31	C1QC (ENSG00000159189) #32	ENSG00000289692	C1QA (ENSG00000173372) #33	EPHA8 (ENSG00000070886) #34	ZBTB40 (ENSG00000184677) #35	WNT4 (ENSG00000162552) #36
Gorilla	MODERN SPECIES		ENSGGOG00000000392 #7	ENSGGOG00000004412	ENSGGOG00000023737	CNR2 (ENSGGOG00000022619) #10	FUCA1 (ENSGGOG00000006733) #11	HMGCL (ENSGGOG00000004339) #12	GALE (ENSGGOG00000004333) #13	LYPLA2 (ENSGGOG00000004330) #14	PITHD1 (ENSGGOG00000004326) #15	ELOA (ENSGGOG00000015012) #16	RPL11 (ENSGGOG00000014628) #17	ENSGGOG00000023367	ID3 (ENSGGOG00000008431) #18	E2F2 (ENSGGOG00000003033) #19	ASAP3 (ENSGGOG00000001154) #21	TCEA3 (ENSGGOG00000001152) #22	ZNF436 (ENSGGOG00000037368) #23	HNRNPR (ENSGGOG00000013250) #24	HTR1D (ENSGGOG00000002214) #25	LUZP1 (ENSGGOG00000012024) #26	KDM1A (ENSGGOG00000003664) #27	ENSGGOG00000043959 #28	LACTBL1 (ENSGGOG00000014102) #29	EPHB2 (ENSGGOG00000008345) #30	C1QB (ENSGGOG00000041359) #31	C1QC (ENSGGOG00000010043) #32	C1QA (ENSGGOG00000010034) #33	EPHA8 (ENSGGOG00000010020) #34	ZBTB40 (ENSGGOG00000010010) #35	WNT4 (ENSGGOG00000022618) #36	ENSGGOG00000043752 ##37
Orangutan	MODERN SPECIES		IL22RA1 (ENSPPYG00000001723)	MYOM3 (ENSPPYG00000001724)	SRSF10 (ENSPPYG00000001726) #7	PNRC2 (ENSPPYG00000040540) #8	CNR2 (ENSPPYG00000001729) #10	FUCA1 (ENSPPYG00000001730) #11	GALE (ENSPPYG00000001731) #12	LYPLA2 (ENSPPYG00000001733) #14	PITHD1 (ENSPPYG00000001734) #15	ELOA (ENSPPYG00000001735) #16	RPL11 (ENSPPYG00000001736) #17	ENSPPYG00000001737	ID3 (ENSPPYG00000001738) #18	E2F2 (ENSPPYG00000001739) #19	ASAP3 (ENSPPYG00000001740) #21	TCEA3 (ENSPPYG00000001741) #22	ENSPPYG00000031850	ZNF436 (ENSPPYG00000001743) #23	HNRNPR (ENSPPYG00000001744) #24	HTR1D (ENSPPYG00000001745) #25	LUZP1 (ENSPPYG00000001746) #26	KDM1A (ENSPPYG00000001747) #27	TEX46 (ENSPPYG00000035212) #28	LACTBL1 (ENSPPYG00000034082) #29	EPHB2 (ENSPPYG00000029431) #30	C1QB (ENSPPYG00000001748) #31	C1QC (ENSPPYG00000001749) #32	C1QA (ENSPPYG00000001750) #33	EPHA8 (ENSPPYG00000001751) #34	ZBTB40 (ENSPPYG00000001752) #35	WNT4 (ENSPPYG00000001754) #36
Gibbon	MODERN SPECIES	16	IFNLR1 (ENSNLEG00000008884)	IL22RA1 (ENSNLEG00000008862)	MYOM3 (ENSNLEG00000008781)	CNR2 (ENSNLEG00000008780) #10	FUCA1 (ENSNLEG00000008750) #11	HMGCL (ENSNLEG00000008664) #12	GALE (ENSNLEG00000008652) #13	ENSNLEG00000008646 #14	PITHD1 (ENSNLEG00000008633) #15	ELOA (ENSNLEG00000034092) #16	RPL11 (ENSNLEG00000028203) #17	ENSNLEG00000028539	ID3 (ENSNLEG00000031287) #18	E2F2 (ENSNLEG00000008555) #19	ASAP3 (ENSNLEG00000008490) #21	ENSNLEG00000029195 #22	ZNF436 (ENSNLEG00000008477) #23	HNRNPR (ENSNLEG00000008411) #24	LUZP1 (ENSNLEG00000008408) #26	KDM1A (ENSNLEG00000008363) #27	LACTBL1 (ENSNLEG00000008360) #29	EPHB2 (ENSNLEG00000008335) #30	C1QB (ENSNLEG00000008329) #31	C1QC (ENSNLEG00000008324) #32	C1QA (ENSNLEG00000008315) #33	EPHA8 (ENSNLEG00000008246) #34	ZBTB40 (ENSNLEG00000008268) #35	ENSNLEG00000008244	ENSNLEG00000008238 #36	CDC42 (ENSNLEG00000033395) ##37	ENSNLEG00000008196
Laurasiatheria	ANCESTRAL SPECIES		ENSGT00940000154450 #7	ENSGT00530000063881.a.b #8	ENSGT00990000204354	ENSGT01060000248564.a.b #10	ENSGT00440000035378.c #11	ENSGT00940000158484 #12	ENSGT00940000158000 #13	ENSGT00940000156197 #14	ENSGT00490000043398 #15	ENSGT00390000002428.a.g.a #16	ENSGT00910000144211.n.a #17	ENSGT00940000162741.i.a	ENSGT00940000160504 #18	ENSGT00940000160992 #19	ENSGT00940000161085 #21	ENSGT00940000157034 #22	ENSGT00940000153587.b #23	ENSGT00940000153511.a #24	ENSGT00940000154484.B.a.b #25	ENSGT00950000182852.A.b #26	ENSGT00940000157193 #27	ENSGT00390000007769 #28	ENSGT00450000040404.a #29	ENSGT00940000155503 #30	ENSGT00940000161091 #31	ENSGT00940000161227 #32	ENSGT00940000162143 #33	ENSGT00940000160469 #34	ENSGT00930000151052 #35	ENSGT00940000159654 #36	ENSGT00940000153675.a.a.b.f ##37
Laurasiatheria_a	ANCESTRAL SPECIES		ENSGT00940000154450 #7	ENSGT00530000063881.a.b #8	ENSGT00990000204354	ENSGT01060000248564.a.b #10	ENSGT00440000035378.c #11	ENSGT00940000158484 #12	ENSGT00940000158000 #13	ENSGT00940000156197 #14	ENSGT00490000043398 #15	ENSGT00390000002428.a.g.a #16	ENSGT00910000144211.n.a #17	ENSGT00940000162741.i.a	ENSGT00940000160504 #18	ENSGT00940000160992 #19	ENSGT00940000161085 #21	ENSGT00940000157034 #22	ENSGT00940000153587.b #23	ENSGT00940000153511.a #24	ENSGT00940000154484.B.a.b #25	ENSGT00950000182852.A.b #26	ENSGT00940000157193 #27	ENSGT00390000007769 #28	ENSGT00450000040404.a #29	ENSGT00940000155503 #30	ENSGT00940000161091 #31	ENSGT00940000161227 #32	ENSGT00940000162143 #33	ENSGT00940000160469 #34	ENSGT00930000151052 #35	ENSGT00940000159654 #36	ENSGT00940000153675.a.a.b.f.t ##37
Artiodactyla	ANCESTRAL SPECIES		ENSGT00530000063881.a.b #8	ENSGT01030000235992	ENSGT01060000248564.a.b #10	ENSGT00440000035378.c #11	ENSGT00940000158484 #12	ENSGT00940000158000 #13	ENSGT00940000156197 #14	ENSGT00490000043398 #15	ENSGT00390000002428.a.g.a #16	ENSGT00910000144211.n.a #17	ENSGT00910000144211.o ##17	ENSGT00940000162741.i.a	ENSGT00940000160504 #18	ENSGT00940000160992 #19	ENSGT00940000161085 #21	ENSGT00940000157034 #22	ENSGT00940000153587.b #23	ENSGT00940000153511.a #24	ENSGT01010000222287.B.b.a.b.a	ENSGT00950000182852.A.b #26	ENSGT00940000157193 #27	ENSGT00390000007769 #28	ENSGT00450000040404.a #29	ENSGT00940000155503 #30	ENSGT00940000161091 #31	ENSGT00940000161227 #32	ENSGT00940000162143 #33	ENSGT00940000160469 #34	ENSGT00930000151052 #35	ENSGT00940000159654 #36	ENSGT00940000153675.a.a.b.f.t ##37
Suina	ANCESTRAL SPECIES	10	ENSGT00940000154450 #7	ENSGT00530000063881.a.b #8	ENSGT01060000248564.a.b #10	ENSGT00440000035378.c #11	ENSGT00940000158484 #12	ENSGT00940000158000 #13	ENSGT00940000156197 #14	ENSGT00490000043398 #15	ENSGT00390000002428.a.g.a #16	ENSGT00910000144211.n.a #17	ENSGT00910000144211.o ##17	ENSGT00940000162741.i.a	ENSGT00940000160504 #18	ENSGT00940000160992 #19	ENSGT00940000161085 #21	ENSGT00940000157034 #22	ENSGT00940000153587.b #23	ENSGT00940000153511.a #24	ENSGT01010000222287.B.b.a.b.a	ENSGT00950000182852.A.b #26	ENSGT00940000157193 #27	ENSGT00390000007769 #28	ENSGT00450000040404.a #29	ENSGT00940000155503 #30	ENSGT00940000161091 #31	ENSGT00940000161227 #32	ENSGT00940000162143 #33	ENSGT00940000160469 #34	ENSGT00930000151052 #35	ENSGT00940000159654 #36	ENSGT00940000153675.a.a.b.f.t ##37
Chacoan peccary	MODERN SPECIES	808	SRSF10 (ENSCWAG00000003966) #7	PNRC2 (ENSCWAG00000003934) #8	ENSCWAG00000003911	CNR2 (ENSCWAG00000003894) #10	FUCA1 (ENSCWAG00000003736) #11	ENSCWAG00000015862 #12	GALE (ENSCWAG00000015839) #13	LYPLA2 (ENSCWAG00000015712) #14	PITHD1 (ENSCWAG00000015655) #15	ELOA (ENSCWAG00000015633) #16	RPL11 (ENSCWAG00000015539) #17	ENSCWAG00000015487	ID3 (ENSCWAG00000015449) #18	E2F2 (ENSCWAG00000015372) #19	ASAP3 (ENSCWAG00000015207) #21	TCEA3 (ENSCWAG00000015164) #22	ZNF436 (ENSCWAG00000015130) #23	HNRNPR (ENSCWAG00000015020) #24	HTR1D (ENSCWAG00000014997) #25	LUZP1 (ENSCWAG00000014958) #26	KDM1A (ENSCWAG00000014847) #27	TEX46 (ENSCWAG00000014803) #28	LACTBL1 (ENSCWAG00000014714) #29	EPHB2 (ENSCWAG00000014368) #30	C1QB (ENSCWAG00000014330) #31	C1QC (ENSCWAG00000014280) #32	C1QA (ENSCWAG00000014258) #33	EPHA8 (ENSCWAG00000014139) #34	ZBTB40 (ENSCWAG00000014072) #35	WNT4 (ENSCWAG00000014008) #36	CDC42 (ENSCWAG00000013943) ##37
Pig	MODERN SPECIES	14	MYOM3 (ENSSSCG00000036534)	SRSF10 (ENSSSCG00000036293) #7	PNRC2 (ENSSSCG00000023326) #8	CNR2 (ENSSSCG00000027849) #10	FUCA1 (ENSSSCG00000027659) #11	HMGCL (ENSSSCG00000026025) #12	GALE (ENSSSCG00000027827) #13	LYPLA2 (ENSSSCG00000023191) #14	PITHD1 (ENSSSCG00000023495) #15	ELOA (ENSSSCG00000025440) #16	RPL11 (ENSSSCG00000024260) ##17	ENSSSCG00000038035	ID3 (ENSSSCG00000039514) #18	E2F2 (ENSSSCG00000032710) #19	ASAP3 (ENSSSCG00000028108) #21	TCEA3 (ENSSSCG00000032674) #22	ZNF436 (ENSSSCG00000035332) #23	HNRNPR (ENSSSCG00000023761) #24	ENSSSCG00000025500	LUZP1 (ENSSSCG00000003532) #26	KDM1A (ENSSSCG00000003531) #27	TEX46 (ENSSSCG00000003530) #28	LACTBL1 (ENSSSCG00000003529) #29	EPHB2 (ENSSSCG00000003527) #30	C1QB (ENSSSCG00000033512) #31	C1QC (ENSSSCG00000038706) #32	C1QA (ENSSSCG00000003524) #33	EPHA8 (ENSSSCG00000003523) #34	ZBTB40 (ENSSSCG00000026276) #35	ENSSSCG00000003521 #36	CDC42 (ENSSSCG00000003520) ##37
Artiodactyla_a	ANCESTRAL SPECIES		ENSGT00940000154450 #7	ENSGT00530000063881.a.b #8	ENSGT01030000235992	ENSGT00940000165247	ENSGT01060000248564.a.b #10	ENSGT00440000035378.c #11	ENSGT00940000158484 #12	ENSGT00940000158000 #13	ENSGT00940000156197 #14	ENSGT00490000043398 #15	ENSGT00390000002428.a.g.a #16	ENSGT00910000144211.n.a #17	ENSGT00940000160504 #18	ENSGT00940000160992 #19	ENSGT00940000161085 #21	ENSGT00940000157034 #22	ENSGT00940000153587.b #23	ENSGT00940000153511.a #24	ENSGT01010000222287.B.b.a.b.a	ENSGT00950000182852.A.b #26	ENSGT00940000157193 #27	ENSGT00390000007769 #28	ENSGT00450000040404.a #29	ENSGT00940000155503 #30	ENSGT00940000161091 #31	ENSGT00940000161227 #32	ENSGT00940000162143 #33	ENSGT00940000160469 #34	ENSGT00930000151052 #35	ENSGT00940000159654 #36	ENSGT00940000153675.a.a.b.f.t ##37
Camelidae	ANCESTRAL SPECIES	3	ENSGT00940000158669	ENSGT00940000154450 #7	ENSGT00530000063881.a.b #8	ENSGT00940000165247	ENSGT01060000248564.a.b #10	ENSGT00440000035378.c #11	ENSGT00940000158484 #12	ENSGT00940000158000 #13	ENSGT00940000156197 #14	ENSGT00490000043398 #15	ENSGT00390000002428.a.g.a #16	ENSGT00910000144211.n.a #17	ENSGT00940000160504 #18	ENSGT00940000160992 #19	ENSGT00940000161085 #21	ENSGT00940000157034 #22	ENSGT00940000153587.b #23	ENSGT00940000153511.a #24	ENSGT00940000154484.B.a.b #25	ENSGT00950000182852.A.b #26	ENSGT00940000157193 #27	ENSGT00390000007769 #28	ENSGT00450000040404.a #29	ENSGT00940000155503 #30	ENSGT00940000161091 #31	ENSGT00940000161227 #32	ENSGT00940000162143 #33	ENSGT00940000160469 #34	ENSGT00930000151052 #35	ENSGT00940000159654 #36	ENSGT00940000153675.a.a.b.e.a ##37
Arabian camel	MODERN SPECIES	4	MYOM3 (ENSCDRG00005003689)	SRSF10 (ENSCDRG00005003602) #7	PNRC2 (ENSCDRG00005003571) #8	ENSCDRG00005003543	CNR2 (ENSCDRG00005003510) #10	FUCA1 (ENSCDRG00005003479) #11	HMGCL (ENSCDRG00005003396) #12	GALE (ENSCDRG00005003344) #13	LYPLA2 (ENSCDRG00005003312) #14	PITHD1 (ENSCDRG00005018453) #15	ELOA (ENSCDRG00005018386) #16	RPL11 (ENSCDRG00005018317) #17	ENSCDRG00005018301 #18	E2F2 (ENSCDRG00005018277) #19	ASAP3 (ENSCDRG00005017913) #21	TCEA3 (ENSCDRG00005017851) #22	ZNF436 (ENSCDRG00005017814) #23	HNRNPR (ENSCDRG00005017745) #24	HTR1D (ENSCDRG00005017723) #25	ENSCDRG00005017708	LUZP1 (ENSCDRG00005017675) #26	KDM1A (ENSCDRG00005014888) #27	TEX46 (ENSCDRG00005014727) #28	LACTBL1 (ENSCDRG00005014651) #29	EPHB2 (ENSCDRG00005014531) #30	C1QB (ENSCDRG00005014476) #31	C1QC (ENSCDRG00005014455) #32	C1QA (ENSCDRG00005014427) #33	EPHA8 (ENSCDRG00005014357) #34	ZBTB40 (ENSCDRG00005014228) #35	WNT4 (ENSCDRG00005014185) #36
Alpaca	MODERN SPECIES	2262																TCEA3 (ENSVPAG00000006414) #22	ENSVPAG00000006412	ENSVPAG00000006411
Artiodactyla_b	ANCESTRAL SPECIES		ENSGT00940000158669	ENSGT00940000154450 #7	ENSGT00530000063881.a.b #8	ENSGT00940000165247	ENSGT01060000248564.a.b #10	ENSGT00440000035378.c #11	ENSGT00940000158484 #12	ENSGT00940000158000 #13	ENSGT00940000156197 #14	ENSGT00490000043398 #15	ENSGT00390000002428.a.g.a #16	ENSGT00910000144211.n.a #17	ENSGT00940000160504 #18	ENSGT00940000160992 #19	ENSGT00940000161085 #21	ENSGT00940000157034 #22	ENSGT00940000153587.b #23	ENSGT00940000153511.a #24	ENSGT01010000222287.B.b.a.b.a	ENSGT00950000182852.A.b #26	ENSGT00940000157193 #27	ENSGT00390000007769 #28	ENSGT00450000040404.a #29	ENSGT00940000155503 #30	ENSGT00940000161091 #31	ENSGT00940000154431.e.a.a.b.a.d	ENSGT00940000161227 #32	ENSGT00940000162143 #33	ENSGT00940000160469 #34	ENSGT00930000151052 #35	ENSGT00940000159654 #36
Cetacea	ANCESTRAL SPECIES		ENSGT00940000158669	ENSGT00940000154450 #7	ENSGT00530000063881.a.b #8	ENSGT00940000165247	ENSGT01060000248564.a.b #10	ENSGT00440000035378.c #11	ENSGT00940000158484 #12	ENSGT00940000158000 #13	ENSGT00940000156197 #14	ENSGT00490000043398 #15	ENSGT00390000002428.a.g.a #16	ENSGT00910000144211.n.a #17	ENSGT00940000160504 #18	ENSGT00940000160992 #19	ENSGT00940000161085 #21	ENSGT00940000157034 #22	ENSGT00940000153587.b #23	ENSGT00940000153511.a #24	ENSGT01010000222287.B.b.a.b.a	ENSGT00950000182852.A.b #26	ENSGT00940000157193 #27	ENSGT00390000007769 #28	ENSGT00450000040404.a #29	ENSGT00940000155503 #30	ENSGT00940000161091 #31	ENSGT00940000154431.e.a.a.b.a.d.a	ENSGT00940000161227 #32	ENSGT00940000162143 #33	ENSGT00940000160469 #34	ENSGT00930000151052 #35	ENSGT00940000159654 #36
Odontoceti	ANCESTRAL SPECIES		ENSGT00940000158669	ENSGT00940000154450 #7	ENSGT00530000063881.a.b #8	ENSGT00940000165247	ENSGT01060000248564.a.b #10	ENSGT00440000035378.c #11	ENSGT00940000158484 #12	ENSGT00940000158000 #13	ENSGT00940000156197 #14	ENSGT00490000043398 #15	ENSGT00390000002428.a.g.a #16	ENSGT00910000144211.n.a #17	ENSGT00940000160504 #18	ENSGT00940000160992 #19	ENSGT00940000161085 #21	ENSGT00940000157034 #22	ENSGT00940000153587.b #23	ENSGT00940000153511.a #24	ENSGT01010000222287.B.b.a.b.a	ENSGT00950000182852.A.b #26	ENSGT00940000157193 #27	ENSGT00390000007769 #28	ENSGT00450000040404.a #29	ENSGT00940000155503 #30	ENSGT00940000161091 #31	ENSGT00940000154431.e.a.a.b.a.d.a	ENSGT00940000161227 #32	ENSGT00940000162143 #33	ENSGT00940000160469 #34	ENSGT00930000151052 #35	ENSGT00940000159654 #36
Odontoceti_a	ANCESTRAL SPECIES		ENSGT00940000161366	ENSGT00940000158669	ENSGT00940000154450 #7	ENSGT00530000063881.a.b #8	ENSGT01060000248564.a.b #10	ENSGT00440000035378.c #11	ENSGT00940000158484 #12	ENSGT00940000158000 #13	ENSGT00940000156197 #14	ENSGT00490000043398 #15	ENSGT00390000002428.a.g.a #16	ENSGT00910000144211.n.a #17	ENSGT00940000160504 #18	ENSGT00940000160992 #19	ENSGT00940000161085 #21	ENSGT00940000157034 #22	ENSGT00940000153587.b #23	ENSGT00940000153511.a #24	ENSGT01010000222287.B.b.a.b.a	ENSGT00950000182852.A.b #26	ENSGT00940000157193 #27	ENSGT00390000007769 #28	ENSGT00450000040404.a #29	ENSGT00940000155503 #30	ENSGT00940000161091 #31	ENSGT00940000154431.e.a.a.b.a.d.a	ENSGT00940000161227 #32	ENSGT00940000162143 #33	ENSGT00940000160469 #34	ENSGT00930000151052 #35	ENSGT00940000159654 #36
Odontoceti_b	ANCESTRAL SPECIES		ENSGT00530000063881.a.b #8	ENSGT00940000165247	ENSGT00910000148416	ENSGT01060000248564.a.b #10	ENSGT00440000035378.c #11	ENSGT00940000158484 #12	ENSGT00940000158000 #13	ENSGT00940000156197 #14	ENSGT00490000043398 #15	ENSGT00390000002428.a.g.a #16	ENSGT00910000144211.n.a #17	ENSGT01000000221911	ENSGT00940000160504 #18	ENSGT00940000160992 #19	ENSGT00940000161085 #21	ENSGT00940000157034 #22	ENSGT00940000153587.b #23	ENSGT00940000153511.a #24	ENSGT01010000222287.B.b.a.b.a	ENSGT00950000182852.A.b #26	ENSGT00940000157193 #27	ENSGT00390000007769 #28	ENSGT00450000040404.a #29	ENSGT00940000155503 #30	ENSGT00940000161091 #31	ENSGT00940000154431.e.a.a.b.a.d.a	ENSGT00940000161227 #32	ENSGT00940000162143 #33	ENSGT00940000160469 #34	ENSGT00930000151052 #35	ENSGT00940000159654 #36
Monodontidae	ANCESTRAL SPECIES		ENSGT00530000063881.a.b #8	ENSGT00940000165247	ENSGT00910000148416	ENSGT01060000248564.a.b #10	ENSGT00440000035378.c #11	ENSGT00940000158484 #12	ENSGT00940000158000 #13	ENSGT00940000156197 #14	ENSGT00490000043398 #15	ENSGT00390000002428.a.g.a #16	ENSGT00910000144211.n.a #17	ENSGT01000000221911	ENSGT00940000160504 #18	ENSGT00940000160992 #19	ENSGT00940000161085 #21	ENSGT00940000157034 #22	ENSGT00940000153587.b #23	ENSGT00940000153511.a #24	ENSGT01010000222287.B.b.a.b.a	ENSGT00950000182852.A.b #26	ENSGT00940000157193 #27	ENSGT00390000007769 #28	ENSGT00450000040404.a #29	ENSGT00940000155503 #30	ENSGT00940000161091 #31	ENSGT00940000154431.e.a.a.b.a.d.a	ENSGT00940000161227 #32	ENSGT00940000162143 #33	ENSGT00940000160469 #34	ENSGT00930000151052 #35	ENSGT00940000159654 #36
Narwhal	MODERN SPECIES	304	PNRC2 (ENSMMNG00015007804) #8	ENSMMNG00015007815	ENSMMNG00015007823	CNR2 (ENSMMNG00015007838) #10	FUCA1 (ENSMMNG00015007853) #11	HMGCL (ENSMMNG00015007896) #12	GALE (ENSMMNG00015007936) #13	ENSMMNG00015007987 #14	PITHD1 (ENSMMNG00015008027) #15	ELOA (ENSMMNG00015008055) #16	RPL11 (ENSMMNG00015008088) #17	ENSMMNG00015008118	ID3 (ENSMMNG00015008130) #18	E2F2 (ENSMMNG00015008149) #19	ASAP3 (ENSMMNG00015008190) #21	TCEA3 (ENSMMNG00015008237) #22	ZNF436 (ENSMMNG00015008256) #23	HNRNPR (ENSMMNG00015008279) #24	ENSMMNG00015005543	LUZP1 (ENSMMNG00015005565) #26	KDM1A (ENSMMNG00015005608) #27	TEX46 (ENSMMNG00015005658) #28	LACTBL1 (ENSMMNG00015005676) #29	EPHB2 (ENSMMNG00015005718) #30	ENSMMNG00015005792 #31	C1QC (ENSMMNG00015005812) #32	C1QA (ENSMMNG00015005824) #33	EPHA8 (ENSMMNG00015005850) #34	ZBTB40 (ENSMMNG00015005888) #35	WNT4 (ENSMMNG00015005944) #36	CDC42 (ENSMMNG00015006043) ##37
Beluga whale	MODERN SPECIES	51	SRSF10 (ENSDLEG00000010621) #7	PNRC2 (ENSDLEG00000010644) #8	ENSDLEG00000010652	CNR2 (ENSDLEG00000010661) #10	FUCA1 (ENSDLEG00000010671) #11	HMGCL (ENSDLEG00000010741) #12	GALE (ENSDLEG00000010756) #13	LYPLA2 (ENSDLEG00000010775) #14	PITHD1 (ENSDLEG00000010793) #15	ELOA (ENSDLEG00000010824) #16	RPL11 (ENSDLEG00000010852) #17	ENSDLEG00000010866	ID3 (ENSDLEG00000010895) #18	E2F2 (ENSDLEG00000010907) #19	ASAP3 (ENSDLEG00000010923) #21	TCEA3 (ENSDLEG00000010970) #22	ZNF436 (ENSDLEG00000010986) #23	HNRNPR (ENSDLEG00000010998) #24	ENSDLEG00000011020	ENSDLEG00000011025	LUZP1 (ENSDLEG00000011042) #26	KDM1A (ENSDLEG00000011095) #27	TEX46 (ENSDLEG00000011203) #28	LACTBL1 (ENSDLEG00000011226) #29	EPHB2 (ENSDLEG00000011282) #30	C1QB (ENSDLEG00000011312) #31	ENSDLEG00000011334	C1QC (ENSDLEG00000011346) #32	C1QA (ENSDLEG00000011355) #33	EPHA8 (ENSDLEG00000011365) #34	ZBTB40 (ENSDLEG00000011404) #35
Vaquita	MODERN SPECIES		SRSF10 (ENSPSNG00000000799) #7	PNRC2 (ENSPSNG00000000768) #8	ENSPSNG00000000754	CNR2 (ENSPSNG00000000742) #10	FUCA1 (ENSPSNG00000000723) #11	HMGCL (ENSPSNG00000000674) #12	GALE (ENSPSNG00000000630) #13	ENSPSNG00000000573 #14	PITHD1 (ENSPSNG00000000529) #15	ELOA (ENSPSNG00000000503) #16	RPL11 (ENSPSNG00000000481) #17	ENSPSNG00000000461	ID3 (ENSPSNG00000000452) #18	E2F2 (ENSPSNG00000000429) #19	ASAP3 (ENSPSNG00000000355) #21	TCEA3 (ENSPSNG00000000283) #22	ZNF436 (ENSPSNG00000000263) #23	HNRNPR (ENSPSNG00000000225) #24	HTR1D (ENSPSNG00000000194) #25	ENSPSNG00000000186	LUZP1 (ENSPSNG00000000172) #26	KDM1A (ENSPSNG00000000123) #27	TEX46 (ENSPSNG00000000083) #28	LACTBL1 (ENSPSNG00000000066) #29	EPHB2 (ENSPSNG00000000028) #30	C1QB (ENSPSNG00000000017) #31	ENSPSNG00000000015	C1QC (ENSPSNG00000000012) #32	C1QA (ENSPSNG00000000010) #33	EPHA8 (ENSPSNG00000000007) #34	ZBTB40 (ENSPSNG00000003174) #35
Dolphin	MODERN SPECIES	2875															ASAP3 (ENSTTRG00000007788) #21	TCEA3 (ENSTTRG00000007775) #22	ZNF436 (ENSTTRG00000007756) #23	ENSTTRG00000007752	LUZP1 (ENSTTRG00000007747) #26	KDM1A (ENSTTRG00000007737) #27	LACTBL1 (ENSTTRG00000007729) #29
Sperm whale	DUPLICATION
Sperm whale	MODERN SPECIES	974															ENSPCTG00005020634 #21	ENSPCTG00005020667 #22
Sperm whale	MODERN SPECIES	14	IFNLR1 (ENSPCTG00005007312)	GRHL3 (ENSPCTG00005007387)	SRSF10 (ENSPCTG00005007467) #7	PNRC2 (ENSPCTG00005007515) #8	ENSPCTG00005007522	CNR2 (ENSPCTG00005007530) #10	FUCA1 (ENSPCTG00005007572) #11	HMGCL (ENSPCTG00005007679) #12	GALE (ENSPCTG00005007731) #13	LYPLA2 (ENSPCTG00005007766) #14	PITHD1 (ENSPCTG00005007836) #15	ELOA (ENSPCTG00005007856) #16	RPL11 (ENSPCTG00005007888) #17	ENSPCTG00005007932	ENSPCTG00005007949 #21	ENSPCTG00005007963 #22	ZNF436 (ENSPCTG00005007973) #23	HNRNPR (ENSPCTG00005008005) #24	ENSPCTG00005008139	HTR1D (ENSPCTG00005008157)	LUZP1 (ENSPCTG00005008166) #26	ENSPCTG00005008174	KDM1A (ENSPCTG00005008204) #27	TEX46 (ENSPCTG00005008344) #28	C1QB (ENSPCTG00005008370) #31	ENSPCTG00005008386	C1QC (ENSPCTG00005008412) #32	C1QA (ENSPCTG00005008429) #33	EPHA8 (ENSPCTG00005008456) #34	ZBTB40 (ENSPCTG00005008541) #35	CDC42 (ENSPCTG00005008689) ##37
Blue whale	MODERN SPECIES		ENSBMSG00010005073 #8	CNR2 (ENSBMSG00010005035) #10	ENSBMSG00010005030	ENSBMSG00010004987 #11	ENSBMSG00010004976	HMGCL (ENSBMSG00010004967) #12	GALE (ENSBMSG00010004954) #13	ENSBMSG00010004942 #14	ENSBMSG00010004936 #15	ELOA (ENSBMSG00010004932) #16	RPL11 (ENSBMSG00010004925) #17	ENSBMSG00010004917	ID3 (ENSBMSG00010004913) #18	E2F2 (ENSBMSG00010004902) #19	ASAP3 (ENSBMSG00010004825) #21	TCEA3 (ENSBMSG00010004788) #22	ZNF436 (ENSBMSG00010004782) #23	HNRNPR (ENSBMSG00010004760) #24	HTR1D (ENSBMSG00010004745) #25	ENSBMSG00010004733	LUZP1 (ENSBMSG00010003518) #26	KDM1A (ENSBMSG00010003502) #27	TEX46 (ENSBMSG00010003491) #28	LACTBL1 (ENSBMSG00010003484) #29	EPHB2 (ENSBMSG00010003449) #30	C1QB (ENSBMSG00010003440) #31	ENSBMSG00010003435	C1QC (ENSBMSG00010003431) #32	C1QA (ENSBMSG00010003427) #33	EPHA8 (ENSBMSG00010003417) #34	ZBTB40 (ENSBMSG00010003402) #35
Pecora	ANCESTRAL SPECIES	16	ENSGT00940000154450 #7	ENSGT00530000063881.a.b #8	ENSGT01030000235992	ENSGT00940000165247	ENSGT01060000248564.a.b #10	ENSGT00440000035378.c #11	ENSGT00940000158484 #12	ENSGT00940000158000 #13	ENSGT00940000156197.d #14	ENSGT00490000043398 #15	ENSGT00390000002428.a.g.a #16	ENSGT00910000144211.n.a #17	ENSGT00940000160504 #18	ENSGT00940000160992 #19	ENSGT00940000161085 #21	ENSGT00940000157034 #22	ENSGT00940000153587.b #23	ENSGT00940000153511.a #24	ENSGT01010000222287.B.b.a.b.a	ENSGT00950000182852.A.b #26	ENSGT00940000157193 #27	ENSGT00390000007769 #28	ENSGT00450000040404.a #29	ENSGT00940000155503 #30	ENSGT00940000161091 #31	ENSGT00940000154431.e.a.a.b.a.d	ENSGT00940000161227 #32	ENSGT00940000162143 #33	ENSGT00940000160469 #34	ENSGT00930000151052 #35	ENSGT00940000159654 #36
Percora_a	ANCESTRAL SPECIES	5	ENSGT00940000158669	ENSGT00940000154450 #7	ENSGT00530000063881.a.b #8	ENSGT00940000165247	ENSGT01060000248564.a.b #10	ENSGT00440000035378.c #11	ENSGT00940000158484 #12	ENSGT00940000158000 #13	ENSGT00940000156197.c.a #14	ENSGT00490000043398 #15	ENSGT00390000002428.a.g.a #16	ENSGT00910000144211.n.a #17	ENSGT00940000160504 #18	ENSGT00940000160992 #19	ENSGT00940000161085 #21	ENSGT00940000157034 #22	ENSGT00940000153587.b #23	ENSGT00940000153511.a #24	ENSGT01010000222287.B.b.a.b.a	ENSGT00950000182852.A.b #26	ENSGT00940000157193 #27	ENSGT00390000007769 #28	ENSGT00450000040404.a #29	ENSGT00940000155503 #30	ENSGT00940000161091 #31	ENSGT00940000154431.e.a.a.b.a.d	ENSGT00940000161227 #32	ENSGT00940000162143 #33	ENSGT00940000160469 #34	ENSGT00930000151052 #35	ENSGT00940000159654 #36
Bovidae	ANCESTRAL SPECIES	8	ENSGT00940000158669	ENSGT00940000154450 #7	ENSGT00530000063881.a.b #8	ENSGT00940000165247	ENSGT01060000248564.a.b #10	ENSGT00440000035378.c #11	ENSGT00940000158484 #12	ENSGT00940000158000 #13	ENSGT00940000156197.d #14	ENSGT00490000043398 #15	ENSGT00390000002428.a.g.a #16	ENSGT00910000144211.n.a #17	ENSGT00940000160504 #18	ENSGT00940000160992 #19	ENSGT00940000161085 #21	ENSGT00940000157034 #22	ENSGT00940000153587.b #23	ENSGT00940000153511.a #24	ENSGT01010000222287.B.b.a.b.a	ENSGT00950000182852.A.b #26	ENSGT00940000157193 #27	ENSGT00390000007769 #28	ENSGT00450000040404.a #29	ENSGT00940000155503 #30	ENSGT00940000161091 #31	ENSGT00940000154431.e.a.a.b.a.d	ENSGT00940000161227 #32	ENSGT00940000162143 #33	ENSGT00940000160469 #34	ENSGT00930000151052 #35	ENSGT00940000159654 #36
Caprinae	ANCESTRAL SPECIES	5	ENSGT00940000161366	ENSGT00940000158669	ENSGT00940000154450 #7	ENSGT00940000165247	ENSGT01060000248564.a.b #10	ENSGT00440000035378.c #11	ENSGT00940000158484 #12	ENSGT00940000158000 #13	ENSGT00940000156197.d #14	ENSGT00490000043398.v #15	ENSGT00390000002428.a.g.a #16	ENSGT00910000144211.n.a #17	ENSGT00940000160504 #18	ENSGT00940000160992 #19	ENSGT00940000161085 #21	ENSGT00940000157034 #22	ENSGT00940000153587.b #23	ENSGT00940000153511.a #24	ENSGT00940000163614.g.a	ENSGT00950000182852.A.b #26	ENSGT00940000157193 #27	ENSGT00390000007769 #28	ENSGT00450000040404.a #29	ENSGT00940000155503 #30	ENSGT00940000161091 #31	ENSGT00940000154431.e.a.a.b.a.d	ENSGT00940000161227 #32	ENSGT00940000162143 #33	ENSGT00940000160469 #34	ENSGT00930000151052 #35	ENSGT00940000159654 #36
Rambouillet Sheep	MODERN SPECIES	11	MYOM3 (ENSOARG00020012256)	SRSF10 (ENSOARG00020012698) #7	ENSOARG00020012860	ENSOARG00020012913	CNR2 (ENSOARG00020012960) #10	FUCA1 (ENSOARG00020012979) #11	HMGCL (ENSOARG00020013128) #12	GALE (ENSOARG00020013234) #13	LYPLA2 (ENSOARG00020013314) #14	PITHD1 (ENSOARG00020013515) #15	ELOA (ENSOARG00020013593) #16	RPL11 (ENSOARG00020013779) #17	ID3 (ENSOARG00020013911) #18	E2F2 (ENSOARG00020013979) #19	ASAP3 (ENSOARG00020014082) #21	TCEA3 (ENSOARG00020014896) #22	ZNF436 (ENSOARG00020014925) #23	HNRNPR (ENSOARG00020014959) #24	ENSOARG00020015124	ENSOARG00020015143	LUZP1 (ENSOARG00020015164) #26	KDM1A (ENSOARG00020015208) #27	TEX46 (ENSOARG00020016013) #28	LACTBL1 (ENSOARG00020016054) #29	EPHB2 (ENSOARG00020016163) #30	C1QB (ENSOARG00020016982) #31	ENSOARG00020017024	C1QC (ENSOARG00020017086) #32	C1QA (ENSOARG00020017135) #33	EPHA8 (ENSOARG00020017175) #34	ZBTB40 (ENSOARG00020017357) #35
Goat	MODERN SPECIES	11	IL22RA1 (ENSCHIG00000025784)	MYOM3 (ENSCHIG00000008403)	ENSCHIG00000023999	SRSF10 (ENSCHIG00000018516) #7	CNR2 (ENSCHIG00000001088) #10	FUCA1 (ENSCHIG00000005760) #11	HMGCL (ENSCHIG00000026977) #12	GALE (ENSCHIG00000014259) #13	ENSCHIG00000027165 #14	ENSCHIG00000011374 #15	ELOA (ENSCHIG00000020842) #16	RPL11 (ENSCHIG00000020543) #17	ID3 (ENSCHIG00000024360) #18	E2F2 (ENSCHIG00000007326) #19	ASAP3 (ENSCHIG00000014521) #21	TCEA3 (ENSCHIG00000016911) #22	ENSCHIG00000023575	HNRNPR (ENSCHIG00000024030) #24	ENSCHIG00000011193	ENSCHIG00000009762	LUZP1 (ENSCHIG00000026939) #26	KDM1A (ENSCHIG00000009169) #27	TEX46 (ENSCHIG00000008997) #28	LACTBL1 (ENSCHIG00000024958) #29	EPHB2 (ENSCHIG00000022795) #30	C1QB (ENSCHIG00000017414) #31	ENSCHIG00000015804	C1QC (ENSCHIG00000011222) #32	C1QA (ENSCHIG00000024710) #33	EPHA8 (ENSCHIG00000023334) #34	ZBTB40 (ENSCHIG00000007943) #35
Bovinae	ANCESTRAL SPECIES	5	ENSGT00940000158669	ENSGT00940000154450 #7	ENSGT00530000063881.a.b #8	ENSGT00940000165247	ENSGT01060000248564.a.b #10	ENSGT00440000035378.c #11	ENSGT00940000158484 #12	ENSGT00940000158000 #13	ENSGT00940000156197.c.a #14	ENSGT00490000043398 #15	ENSGT00390000002428.a.g.a #16	ENSGT00910000144211.n.a #17	ENSGT00940000160504 #18	ENSGT00940000160992 #19	ENSGT00940000161085 #21	ENSGT00940000157034 #22	ENSGT00940000153587.b #23	ENSGT00940000153511.a #24	ENSGT01010000222287.B.b.a.b.a	ENSGT00950000182852.A.b #26	ENSGT00940000157193 #27	ENSGT00390000007769 #28	ENSGT00450000040404.a #29	ENSGT00940000155503 #30	ENSGT00940000161091 #31	ENSGT00940000154431.e.a.a.b.a.d	ENSGT00940000161227 #32	ENSGT00940000162143 #33	ENSGT00940000160469 #34	ENSGT00930000151052 #35	ENSGT00940000159654 #36
Bos	ANCESTRAL SPECIES	6	ENSGT00940000158669	ENSGT00940000154450 #7	ENSGT00530000063881.a.b #8	ENSGT00940000165247	ENSGT01060000248564.a.b #10	ENSGT00440000035378.c #11	ENSGT00940000158484 #12	ENSGT00940000158000 #13	ENSGT00940000156197.d #14	ENSGT00490000043398 #15	ENSGT00390000002428.a.g.a #16	ENSGT00910000144211.n.a #17	ENSGT00940000160504 #18	ENSGT00940000160992 #19	ENSGT00940000161085 #21	ENSGT00940000157034 #22	ENSGT00940000153587.b #23	ENSGT00940000153511.a #24	ENSGT01010000222287.B.b.a.b.a	ENSGT00950000182852.A.b #26	ENSGT00940000157193 #27	ENSGT00390000007769 #28	ENSGT00450000040404.a #29	ENSGT00940000155503.j #30	ENSGT00940000161091 #31	ENSGT00940000154431.e.a.a.b.a.d	ENSGT00940000161227 #32	ENSGT00940000162143 #33	ENSGT00940000160469 #34	ENSGT00930000151052 #35	ENSGT00940000159654 #36
Bos_b	ANCESTRAL SPECIES	20	ENSGT00940000161366	ENSGT00940000158669	ENSGT00940000154450 #7	ENSGT00530000063881.a.b #8	ENSGT01060000248564.a.b #10	ENSGT00440000035378.c #11	ENSGT00940000158484 #12	ENSGT00940000158000 #13	ENSGT00940000156197.c.a #14	ENSGT00490000043398 #15	ENSGT00390000002428.a.g.a #16	ENSGT00910000144211.n.a #17	ENSGT00940000160504 #18	ENSGT00940000160992 #19	ENSGT00940000161085 #21	ENSGT00940000157034 #22	ENSGT00940000153587.b #23	ENSGT00940000153511.a #24	ENSGT01010000222287.B.b.a.b.a	ENSGT00950000182852.A.b #26	ENSGT00940000157193 #27	ENSGT00390000007769 #28	ENSGT00450000040404.a #29	ENSGT00940000155503.j #30	ENSGT00940000161091 #31	ENSGT00940000154431.e.a.a.b.a.d	ENSGT00940000161227 #32	ENSGT00940000162143 #33	ENSGT00940000160469 #34	ENSGT00930000151052 #35	ENSGT00940000159654 #36
Cow	MODERN SPECIES	11	IL22RA1 (ENSBTAG00000001100)	MYOM3 (ENSBTAG00000014885)	SRSF10 (ENSBTAG00000008072) #7	PNRC2 (ENSBTAG00000030435) #8	CNR2 (ENSBTAG00000019371) #10	FUCA1 (ENSBTAG00000030434) #11	HMGCL (ENSBTAG00000021832) #12	GALE (ENSBTAG00000005002) #13	LYPLA2 (ENSBTAG00000011625) #14	PITHD1 (ENSBTAG00000021620) #15	ELOA (ENSBTAG00000026585) #16	RPL11 (ENSBTAG00000020905) #17	ID3 (ENSBTAG00000030425) #18	E2F2 (ENSBTAG00000014400) #19	ASAP3 (ENSBTAG00000012263) #21	TCEA3 (ENSBTAG00000038865) #22	ZNF436 (ENSBTAG00000002594) #23	HNRNPR (ENSBTAG00000016578) #24	HTR1D (ENSBTAG00000040329)	LUZP1 (ENSBTAG00000009502) #26	KDM1A (ENSBTAG00000009500) #27	TEX46 (ENSBTAG00000053631) #28	LACTBL1 (ENSBTAG00000030413) #29	EPHB2 (ENSBTAG00000045902) #30	C1QB (ENSBTAG00000011196) #31	ENSBTAG00000011195	C1QC (ENSBTAG00000011193) #32	C1QA (ENSBTAG00000007153) #33	EPHA8 (ENSBTAG00000020102) #34	ZBTB40 (ENSBTAG00000016448) #35	WNT4 (ENSBTAG00000051083) #36
Hybrid Bos Indicus	MODERN SPECIES	11	IL22RA1 (ENSBIXG00005030112)	MYOM3 (ENSBIXG00005030177)	SRSF10 (ENSBIXG00005030280) #7	ENSBIXG00005030316 #8	ENSBIXG00005030328	CNR2 (ENSBIXG00005030340) #10	FUCA1 (ENSBIXG00005030361) #11	HMGCL (ENSBIXG00005030396) #12	GALE (ENSBIXG00005030410) #13	ENSBIXG00005030440 #14	ENSBIXG00005030463 #15	ELOA (ENSBIXG00005030482) #16	ID3 (ENSBIXG00005030525) #18	E2F2 (ENSBIXG00005030535) #19	ASAP3 (ENSBIXG00005030546) #21	TCEA3 (ENSBIXG00005030565) #22	ZNF436 (ENSBIXG00005030572) #23	HNRNPR (ENSBIXG00005030608) #24	ENSBIXG00005030641	LUZP1 (ENSBIXG00005030651) #26	KDM1A (ENSBIXG00005030666) #27	TEX46 (ENSBIXG00005030685) #28	LACTBL1 (ENSBIXG00005030699) #29	EPHB2 (ENSBIXG00005030712) #30	C1QB (ENSBIXG00005030741) #31	ENSBIXG00005030749	C1QC (ENSBIXG00005030754) #32	ZBTB40 (ENSBIXG00005030774) #35	EPHA8 (ENSBIXG00005030812) #34	WNT4 (ENSBIXG00005030836) #36	CDC42 (ENSBIXG00005001558) ##37
Bos_a	ANCESTRAL SPECIES	46						ENSGT01060000248564.a.b #10	ENSGT00440000035378.c #11	ENSGT00940000158484 #12	ENSGT00940000158000 #13	ENSGT00940000156197.d #14	ENSGT00490000043398 #15	ENSGT00390000002428.a.g.a #16	ENSGT00940000160504 #18	ENSGT00940000160992 #19	ENSGT00940000161085 #21	ENSGT00940000157034 #22	ENSGT00940000153587.b #23	ENSGT00940000153511.a #24	ENSGT01010000222287.B.b.a.b.a	ENSGT00950000182852.A.b #26	ENSGT00940000157193 #27	ENSGT00390000007769 #28	ENSGT00450000040404.a #29	ENSGT00940000155503.j #30	ENSGT00940000161091 #31	ENSGT00940000154431.e.a.a.b.a.d	ENSGT00940000161227 #32	ENSGT00940000162143 #33	ENSGT00940000160469 #34	ENSGT00930000151052 #35	ENSGT00940000159654 #36
Wild yak	MODERN SPECIES	1753							FUCA1 (ENSBMUG00000013863) #11	HMGCL (ENSBMUG00000013890) #12	GALE (ENSBMUG00000013927) #13	ENSBMUG00000013978 #14	PITHD1 (ENSBMUG00000014027) #15	ELOA (ENSBMUG00000014096) #16	ID3 (ENSBMUG00000014128) #18	E2F2 (ENSBMUG00000014201) #19	ASAP3 (ENSBMUG00000014291) #21	TCEA3 (ENSBMUG00000014332) #22	ZNF436 (ENSBMUG00000014346) #23	HNRNPR (ENSBMUG00000014402) #24	HTR1D (ENSBMUG00000014427) #25	LUZP1 (ENSBMUG00000014443) #26	KDM1A (ENSBMUG00000014489) #27	TEX46 (ENSBMUG00000014525) #28	LACTBL1 (ENSBMUG00000014535) #29	EPHB2 (ENSBMUG00000014918) #30	C1QB (ENSBMUG00000015055) #31	ENSBMUG00000015061	C1QC (ENSBMUG00000015067) #32	C1QA (ENSBMUG00000015089) #33	EPHA8 (ENSBMUG00000015108) #34	ZBTB40 (ENSBMUG00000015163) #35	WNT4 (ENSBMUG00000015211) #36
Domestic yak	MODERN SPECIES	11	IL22RA1 (ENSBGRG00000006043)	MYOM3 (ENSBGRG00000005605)	ENSBGRG00000005382 #7	PNRC2 (ENSBGRG00000005344) #8	ENSBGRG00000005315	CNR2 (ENSBGRG00000005295) #10	FUCA1 (ENSBGRG00000005227) #11	HMGCL (ENSBGRG00000005125) #12	GALE (ENSBGRG00000005007) #13	ENSBGRG00000004874 #14	PITHD1 (ENSBGRG00000004830) #15	ELOA (ENSBGRG00000004602) #16	ID3 (ENSBGRG00000004562) #18	E2F2 (ENSBGRG00000004509) #19	ASAP3 (ENSBGRG00000004358) #21	TCEA3 (ENSBGRG00000004156) #22	ZNF436 (ENSBGRG00000004113) #23	HNRNPR (ENSBGRG00000003976) #24	ENSBGRG00000003957	LUZP1 (ENSBGRG00000003910) #26	KDM1A (ENSBGRG00000003651) #27	TEX46 (ENSBGRG00000003590) #28	LACTBL1 (ENSBGRG00000003569) #29	ENSBGRG00000003557	EPHB2 (ENSBGRG00000003473) #30	C1QB (ENSBGRG00000003451) #31	ENSBGRG00000003435	C1QC (ENSBGRG00000003430) #32	C1QA (ENSBGRG00000003422) #33	EPHA8 (ENSBGRG00000003384) #34	ZBTB40 (ENSBGRG00000003315) #35
American bison	MODERN SPECIES	3363	MYOM3 (ENSBBBG00000014693)	SRSF10 (ENSBBBG00000014740) #7	PNRC2 (ENSBBBG00000003581) #8	ENSBBBG00000014759	CNR2 (ENSBBBG00000003584) #10	FUCA1 (ENSBBBG00000006950) #11	HMGCL (ENSBBBG00000014808) #12	GALE (ENSBBBG00000014832) #13	ENSBBBG00000014887 #14	PITHD1 (ENSBBBG00000003682) #15	ELOA (ENSBBBG00000001205) #16	RPL11 (ENSBBBG00000001179) #17	ID3 (ENSBBBG00000001173) #18	E2F2 (ENSBBBG00000001135) #19	ASAP3 (ENSBBBG00000000993) #21	TCEA3 (ENSBBBG00000000941) #22	ZNF436 (ENSBBBG00000000930) #23	HNRNPR (ENSBBBG00000000856) #24	HTR1D (ENSBBBG00000000846) #25	LUZP1 (ENSBBBG00000000837) #26	KDM1A (ENSBBBG00000003619) #27	TEX46 (ENSBBBG00000003601) #28	LACTBL1 (ENSBBBG00000014948) #29	EPHB2 (ENSBBBG00000007412) #30	C1QB (ENSBBBG00000000810) #31	C1QC (ENSBBBG00000003708) #32	C1QA (ENSBBBG00000000807) #33	EPHA8 (ENSBBBG00000003724) #34	ZBTB40 (ENSBBBG00000015088) #35	WNT4 (ENSBBBG00000015113) #36	CDC42 (ENSBBBG00000015145) #37
Siberian musk deer	MODERN SPECIES	354	ENSMMSG00000008044	SRSF10 (ENSMMSG00000008099) #7	PNRC2 (ENSMMSG00000008137) #8	ENSMMSG00000008145	CNR2 (ENSMMSG00000008162) #10	FUCA1 (ENSMMSG00000008170) #11	ENSMMSG00000008212 #12	GALE (ENSMMSG00000008270) #13	ENSMMSG00000008319 #14	ENSMMSG00000008395 #15	ELOA (ENSMMSG00000008447) #16	RPL11 (ENSMMSG00000008484) #17	ID3 (ENSMMSG00000008599) #18	E2F2 (ENSMMSG00000008615) #19	ASAP3 (ENSMMSG00000008686) #21	TCEA3 (ENSMMSG00000008750) #22	ZNF436 (ENSMMSG00000008791) #23	HNRNPR (ENSMMSG00000008829) #24	ENSMMSG00000008999	ENSMMSG00000009011 #26	ENSMMSG00000009047 #27	TEX46 (ENSMMSG00000009098) #28	LACTBL1 (ENSMMSG00000009130) #29	EPHB2 (ENSMMSG00000009204) #30	C1QB (ENSMMSG00000009419) #31	C1QC (ENSMMSG00000009457) #32	C1QA (ENSMMSG00000009478) #33	EPHA8 (ENSMMSG00000009498) #34	ZBTB40 (ENSMMSG00000009593) #35	WNT4 (ENSMMSG00000009640) #36	CDC42 (ENSMMSG00000009676) ##37
Yarkand deer	MODERN SPECIES	31	MYOM3 (ENSCHYG00000009326)	SRSF10 (ENSCHYG00000008859) #7	PNRC2 (ENSCHYG00000008795) #8	ENSCHYG00000008776	CNR2 (ENSCHYG00000008760) #10	FUCA1 (ENSCHYG00000008690) #11	ENSCHYG00000008499 #13	ENSCHYG00000008375 #14	PITHD1 (ENSCHYG00000008305) #15	ELOA (ENSCHYG00000008253) #16	RPL11 (ENSCHYG00000008204) #17	ID3 (ENSCHYG00000008187) #18	E2F2 (ENSCHYG00000008150) #19	ENSCHYG00000008133	ASAP3 (ENSCHYG00000007826) #21	TCEA3 (ENSCHYG00000007755) #22	ZNF436 (ENSCHYG00000007725) #23	HNRNPR (ENSCHYG00000007645) #24	ENSCHYG00000007625	LUZP1 (ENSCHYG00000007580) #26	KDM1A (ENSCHYG00000007485) #27	TEX46 (ENSCHYG00000007471) #28	LACTBL1 (ENSCHYG00000007423) #29	EPHB2 (ENSCHYG00000007261) #30	C1QB (ENSCHYG00000007220) #31	ENSCHYG00000007207	C1QC (ENSCHYG00000007194) #32	C1QA (ENSCHYG00000007174) #33	EPHA8 (ENSCHYG00000007086) #34	ZBTB40 (ENSCHYG00000006725) #35	WNT4 (ENSCHYG00000006643) #36
Laurasiatheria_b	ANCESTRAL SPECIES		ENSGT00940000154450 #7	ENSGT00530000063881.a.b #8	ENSGT00990000204354	ENSGT01060000248564.a.b #10	ENSGT00440000035378.c #11	ENSGT00940000158484 #12	ENSGT00940000158000 #13	ENSGT00940000156197 #14	ENSGT00490000043398 #15	ENSGT00390000002428.a.g.a #16	ENSGT00910000144211.n.a #17	ENSGT00940000162741.i.a	ENSGT00940000160504 #18	ENSGT00940000160992 #19	ENSGT00940000161085 #21	ENSGT00940000157034 #22	ENSGT00940000153587.b #23	ENSGT00940000153511.a #24	ENSGT00940000154484.B.a.b #25	ENSGT00950000182852.A.b #26	ENSGT00940000157193 #27	ENSGT00390000007769 #28	ENSGT00450000040404.a #29	ENSGT00940000155503 #30	ENSGT00940000161091 #31	ENSGT00940000161227 #32	ENSGT00940000162143 #33	ENSGT00940000160469 #34	ENSGT00930000151052 #35	ENSGT00940000159654 #36	ENSGT00940000153675.a.a.a.b #37
Laurasiatheria_c	ANCESTRAL SPECIES		ENSGT00940000158669	ENSGT00940000154450 #7	ENSGT00530000063881.a.b #8	ENSGT00990000204354	ENSGT01060000248564.a.b #10	ENSGT00440000035378.c #11	ENSGT00940000158484 #12	ENSGT00940000158000 #13	ENSGT00940000156197 #14	ENSGT00490000043398 #15	ENSGT00390000002428.a.g.a #16	ENSGT00910000144211.n.a #17	ENSGT00940000160504 #18	ENSGT00940000160992 #19	ENSGT00940000161085 #21	ENSGT00940000157034 #22	ENSGT00940000153587.b #23	ENSGT00940000153511.a #24	ENSGT00940000154484.B.a.b #25	ENSGT00950000182852.A.b #26	ENSGT00940000157193 #27	ENSGT00390000007769 #28	ENSGT00450000040404.a #29	ENSGT00940000155503 #30	ENSGT00940000161091 #31	ENSGT00940000161227 #32	ENSGT00940000162143 #33	ENSGT00940000160469 #34	ENSGT00930000151052 #35	ENSGT00940000159654 #36	ENSGT00940000153675.a.a.a.b #37
Chiroptera	ANCESTRAL SPECIES		ENSGT00940000158669	ENSGT00940000154450 #7	ENSGT00530000063881.a.b #8	ENSGT00990000204354	ENSGT01060000248564.a.b #10	ENSGT00440000035378.c #11	ENSGT00940000158484 #12	ENSGT00940000158000 #13	ENSGT00940000156197 #14	ENSGT00490000043398 #15	ENSGT00390000002428.a.g.a #16	ENSGT00910000144211.n.a #17	ENSGT00940000160504 #18	ENSGT00940000160992 #19	ENSGT00940000161085 #21	ENSGT00940000157034 #22	ENSGT00940000153587.b #23	ENSGT00940000153511.a #24	ENSGT01010000222287.B.b.a.b.a	ENSGT00950000182852.A.b #26	ENSGT00940000157193 #27	ENSGT00390000007769 #28	ENSGT00450000040404.a #29	ENSGT00940000155503 #30	ENSGT00940000161091 #31	ENSGT00940000161227 #32	ENSGT00940000162143 #33	ENSGT00940000160469 #34	ENSGT00930000151052 #35	ENSGT00940000159654 #36	ENSGT00940000153675.a.a.a.b #37
Microchiroptera	ANCESTRAL SPECIES	1	ENSGT00940000158669	ENSGT00940000154450 #7	ENSGT00530000063881.a.b #8	ENSGT00990000204354	ENSGT01060000248564.a.b #10	ENSGT00440000035378.c #11	ENSGT00940000158484 #12	ENSGT00940000158000 #13	ENSGT00940000156197 #14	ENSGT00490000043398 #15	ENSGT00390000002428.a.g.a #16	ENSGT00910000144211.n.a #17	ENSGT00940000160504 #18	ENSGT00940000160992 #19	ENSGT00940000161085 #21	ENSGT00940000157034 #22	ENSGT00940000153587.b #23	ENSGT00940000153511.a #24	ENSGT01010000222287.B.b.a.b.a	ENSGT00950000182852.A.b #26	ENSGT00940000157193 #27	ENSGT00390000007769 #28	ENSGT00450000040404.a #29	ENSGT00940000155503 #30	ENSGT00940000161091 #31	ENSGT00940000161227 #32	ENSGT00940000162143 #33	ENSGT00940000160469 #34	ENSGT00930000151052 #35	ENSGT00940000159654 #36	ENSGT00940000153675.a.a.b.f.t ##37
Microbat	MODERN SPECIES	1065	IFNLR1 (ENSMLUG00000003176)	IL22RA1 (ENSMLUG00000022398)	MYOM3 (ENSMLUG00000013161)	ENSMLUG00000028520 #7	PNRC2 (ENSMLUG00000005289) #8	ENSMLUG00000005281 #11	HMGCL (ENSMLUG00000005276) #12	GALE (ENSMLUG00000011319) #13	LYPLA2 (ENSMLUG00000024092) #14	PITHD1 (ENSMLUG00000005267) #15	ELOA (ENSMLUG00000005258) #16	RPL11 (ENSMLUG00000008868) #17	ID3 (ENSMLUG00000008862) #18	E2F2 (ENSMLUG00000008836) #19	ASAP3 (ENSMLUG00000007641) #21	TCEA3 (ENSMLUG00000003515) #22	ZNF436 (ENSMLUG00000007596) #23	HNRNPR (ENSMLUG00000007582) #24	ENSMLUG00000004640	LUZP1 (ENSMLUG00000010617) #26	KDM1A (ENSMLUG00000010587) #27	LACTBL1 (ENSMLUG00000026314) #29	ENSMLUG00000003167 #30	ENSMLUG00000003164 #31	EPHA8 (ENSMLUG00000003124) #34	ZBTB40 (ENSMLUG00000003108) #35	CDC42 (ENSMLUG00000013365) ##37	ENSMLUG00000002046	ENSMLUG00000026485	HSPG2 (ENSMLUG00000001997)	USP48 (ENSMLUG00000001985)
Greater horseshoe bat	MODERN SPECIES	27	ENSRFEG00010001898	SRSF10 (ENSRFEG00010001865) #7	PNRC2 (ENSRFEG00010001834) #8	ENSRFEG00010001822	CNR2 (ENSRFEG00010001808) #10	FUCA1 (ENSRFEG00010001794) #11	HMGCL (ENSRFEG00010001760) #12	GALE (ENSRFEG00010001720) #13	ENSRFEG00010001683 #14	PITHD1 (ENSRFEG00010001655) #15	ELOA (ENSRFEG00010001619) #16	RPL11 (ENSRFEG00010001575) #17	ID3 (ENSRFEG00010001555) #18	ENSRFEG00010001536 #19	ASAP3 (ENSRFEG00010001480) #21	TCEA3 (ENSRFEG00010001421) #22	ENSRFEG00010001389	ENSRFEG00010001334	ENSRFEG00010001298	LUZP1 (ENSRFEG00010001286) #26	KDM1A (ENSRFEG00010001242) #27	TEX46 (ENSRFEG00010001193) #28	LACTBL1 (ENSRFEG00010001159) #29	EPHB2 (ENSRFEG00010001020) #30	C1QB (ENSRFEG00010000988) #31	C1QC (ENSRFEG00010000962) #32	C1QA (ENSRFEG00010000948) #33	EPHA8 (ENSRFEG00010000905) #34	ZBTB40 (ENSRFEG00010000832) #35	WNT4 (ENSRFEG00010000789) #36	CDC42 (ENSRFEG00010000759) ##37
Megabat	MODERN SPECIES	5374															ASAP3 (ENSPVAG00000014795) #21	TCEA3 (ENSPVAG00000014800) #22	ZNF436 (ENSPVAG00000014803) #23	HNRNPR (ENSPVAG00000014804) #24
Equus	ANCESTRAL SPECIES	2	ENSGT00940000154450 #7	ENSGT00530000063881.a.b #8	ENSGT01060000248564.a.b #10	ENSGT00440000035378.c #11	ENSGT00940000158484 #12	ENSGT00940000158000 #13	ENSGT00940000156197 #14	ENSGT00490000043398 #15	ENSGT00390000002428.a.h ##16	ENSGT00910000144211.n.a #17	ENSGT00940000162741.j	ENSGT00950000186349	ENSGT00940000160504 #18	ENSGT00940000160992 #19	ENSGT00940000161085 #21	ENSGT00940000157034 #22	ENSGT00940000153587.b #23	ENSGT00940000153511.a #24	ENSGT00940000154484.B.a.b #25	ENSGT00950000182852.A.b #26	ENSGT00940000157193 #27	ENSGT00390000007769 #28	ENSGT00450000040404.a #29	ENSGT00940000155503 #30	ENSGT00940000161091 #31	ENSGT00940000161227 #32	ENSGT00940000162143 #33	ENSGT00940000160469 #34	ENSGT00930000151052 #35	ENSGT00940000169199	ENSGT00940000153675.a.a.b.f.t ##37
Donkey	MODERN SPECIES	25	PNRC2 (ENSEASG00005028450) #8	ENSEASG00005004353	CNR2 (ENSEASG00005027682) #10	FUCA1 (ENSEASG00005004361) #11	HMGCL (ENSEASG00005004364) #12	GALE (ENSEASG00005004377) #13	LYPLA2 (ENSEASG00005024808) #14	PITHD1 (ENSEASG00005035155) #15	ENSEASG00005004732 ##16	RPL11 (ENSEASG00005036468) #17	ENSEASG00005033568	ENSEASG00005004740	ENSEASG00005033751 #18	E2F2 (ENSEASG00005004748) #19	ASAP3 (ENSEASG00005004801) #21	TCEA3 (ENSEASG00005005222) #22	ZNF436 (ENSEASG00005005228) #23	HNRNPR (ENSEASG00005005231) #24	HTR1D (ENSEASG00005038482) #25	LUZP1 (ENSEASG00005005238) #26	KDM1A (ENSEASG00005005392) #27	TEX46 (ENSEASG00005033543) #28	LACTBL1 (ENSEASG00005007026) #29	EPHB2 (ENSEASG00005007064) #30	C1QB (ENSEASG00005007247) #31	C1QC (ENSEASG00005023595) #32	ENSEASG00005007252 #33	EPHA8 (ENSEASG00005007259) #34	ZBTB40 (ENSEASG00005007270) #35	ENSEASG00005028240	CDC42 (ENSEASG00005007276) ##37
Horse	MODERN SPECIES	11	SRSF10 (ENSECAG00000023709) #7	PNRC2 (ENSECAG00000024629) #8	CNR2 (ENSECAG00000005682) #10	FUCA1 (ENSECAG00000024652) #11	HMGCL (ENSECAG00000025131) #12	GALE (ENSECAG00000025140) #13	LYPLA2 (ENSECAG00000010211) #14	PITHD1 (ENSECAG00000017545) #15	ENSECAG00000033631 ##16	ENSECAG00000018195 ##16	ENSECAG00000059190	ENSECAG00000038466	ID3 (ENSECAG00000023322) #18	E2F2 (ENSECAG00000023922) #19	ASAP3 (ENSECAG00000007189) #21	TCEA3 (ENSECAG00000010437) #22	ZNF436 (ENSECAG00000011988) #23	HNRNPR (ENSECAG00000013733) #24	HTR1D (ENSECAG00000005697) #25	LUZP1 (ENSECAG00000000901) #26	KDM1A (ENSECAG00000019669) #27	TEX46 (ENSECAG00000027858) #28	LACTBL1 (ENSECAG00000026933) #29	EPHB2 (ENSECAG00000011631) #30	C1QB (ENSECAG00000019868) #31	C1QC (ENSECAG00000020325) #32	C1QA (ENSECAG00000048305) #33	EPHA8 (ENSECAG00000022132) #34	ZBTB40 (ENSECAG00000016319) #35	WNT4 (ENSECAG00000018933)	CDC42 (ENSECAG00000019180) ##37
Carnivora	ANCESTRAL SPECIES	1	ENSGT00530000063881.a.b #8	ENSGT01100000263986 #9	ENSGT01060000248564.a.b #10	ENSGT00440000035378.c #11	ENSGT00940000158484 #12	ENSGT00940000158000 #13	ENSGT00940000156197 #14	ENSGT00490000043398 #15	ENSGT00390000002428.a.g.a #16	ENSGT00910000144211.n.a #17	ENSGT00940000162741.i.a	ENSGT00980000202934	ENSGT00940000160504 #18	ENSGT00940000160992 #19	ENSGT00940000161085 #21	ENSGT00940000157034 #22	ENSGT00940000153587.b #23	ENSGT00940000153511.a #24	ENSGT00940000154484.B.a.b #25	ENSGT00950000182852.A.b #26	ENSGT00940000157193 #27	ENSGT00390000007769 #28	ENSGT00450000040404.a #29	ENSGT00940000155503 #30	ENSGT00940000161091 #31	ENSGT00940000161227 #32	ENSGT00940000162143 #33	ENSGT00940000160469 #34	ENSGT00930000151052 #35	ENSGT00940000159654 #36	ENSGT00940000153675.a.a.a.b #37
Felidae	DUPLICATION
Felidae	ANCESTRAL SPECIES	18	ENSGT00530000063881.a.b #8	ENSGT01100000263986 #9	ENSGT01060000248564.a.b #10	ENSGT00440000035378.c #11	ENSGT00940000158484 #12	ENSGT00940000158000 #13	ENSGT00940000156197 #14	ENSGT00490000043398 #15	ENSGT00390000002428.a.g.a #16	ENSGT00910000144211.n.a #17	ENSGT00940000162741.i.a	ENSGT00980000202934	ENSGT00940000160504 #18	ENSGT00940000160992 #19	ENSGT00940000161085 #21	ENSGT00940000157034.jb #22	ENSGT00940000153587.b #23	ENSGT00940000153511.a #24	ENSGT00940000154484.B.a.b #25	ENSGT00950000182852.A.b #26	ENSGT00940000157193 #27	ENSGT00390000007769 #28	ENSGT00450000040404.a #29	ENSGT00940000155503 #30	ENSGT00940000161091 #31	ENSGT00940000161227 #32	ENSGT00940000162143 #33	ENSGT00940000160469 #34	ENSGT00930000151052 #35	ENSGT00940000159654 #36	ENSGT00940000153675.a.a.a.b #37
Panthera	ANCESTRAL SPECIES	4	ENSGT00940000161366	ENSGT00940000158669	ENSGT01100000263986 #9	ENSGT01060000248564.a.b #10	ENSGT00440000035378.c #11	ENSGT00940000158484 #12	ENSGT00940000158000 #13	ENSGT00940000156197 #14	ENSGT00490000043398 #15	ENSGT00390000002428.a.g.a #16	ENSGT00910000144211.n.a #17	ENSGT00940000162741.i.a	ENSGT00940000160504 #18	ENSGT00940000160992 #19	ENSGT00940000161085 #21	ENSGT00940000157034.jb #22	ENSGT00940000153587.b #23	ENSGT00940000153511.a #24	ENSGT00940000154484.B.a.b #25	ENSGT00950000182852.A.b #26	ENSGT00940000157193 #27	ENSGT00390000007769 #28	ENSGT00450000040404.a #29	ENSGT00940000155503 #30	ENSGT00940000161091 #31	ENSGT00940000161227 #32	ENSGT00940000162143 #33	ENSGT00940000160469 #34	ENSGT00930000151052 #35	ENSGT00940000159654 #36	ENSGT00940000153675.a.a.a.b #37
Panthera_a	ANCESTRAL SPECIES	14	ENSGT00940000161366	ENSGT00940000158669	ENSGT01100000263986 #9	ENSGT01060000248564.a.b #10	ENSGT00440000035378.c #11	ENSGT00940000158484 #12	ENSGT00940000158000 #13	ENSGT00940000156197 #14	ENSGT00490000043398 #15	ENSGT00390000002428.a.g.a #16	ENSGT00910000144211.n.a #17	ENSGT00940000162741.i.a	ENSGT00940000160504 #18	ENSGT00940000160992 #19	ENSGT00940000161085 #21	ENSGT00940000157034.jb #22	ENSGT00940000153587.b #23	ENSGT00940000153511.a #24	ENSGT00940000154484.B.a.b #25	ENSGT00950000182852.A.b #26	ENSGT00940000157193 #27	ENSGT00390000007769 #28	ENSGT00450000040404.a #29	ENSGT00940000155503 #30	ENSGT00940000161091 #31	ENSGT00940000161227 #32	ENSGT00940000162143 #33	ENSGT00940000160469 #34	ENSGT00930000151052 #35	ENSGT00940000159654 #36	ENSGT00940000153675.a.a.a.b #37
leopard	MODERN SPECIES	37	ENSPPRG00000005806 #7	ENSPPRG00000006224 #9	CNR2 (ENSPPRG00000021440) #10	FUCA1 (ENSPPRG00000006290) #11	HMGCL (ENSPPRG00000006454) #12	GALE (ENSPPRG00000006979) #13	LYPLA2 (ENSPPRG00000007121) #14	ENSPPRG00000007171 #15	ELOA (ENSPPRG00000007599) #16	RPL11 (ENSPPRG00000007647) #17	ENSPPRG00000008525	ID3 (ENSPPRG00000008744) #18	E2F2 (ENSPPRG00000009906) #19	ENSPPRG00000010000 #21	ENSPPRG00000010363 #21	TCEA3 (ENSPPRG00000010437) #22	ZNF436 (ENSPPRG00000010564) #23	HNRNPR (ENSPPRG00000011708) #24	HTR1D (ENSPPRG00000021585) #25	LUZP1 (ENSPPRG00000012103) #26	KDM1A (ENSPPRG00000012548) #27	TEX46 (ENSPPRG00000012790) #28	LACTBL1 (ENSPPRG00000013086) #29	EPHB2 (ENSPPRG00000013935) #30	C1QB (ENSPPRG00000014179) #31	C1QC (ENSPPRG00000014357) #32	C1QA (ENSPPRG00000014789) #33	EPHA8 (ENSPPRG00000015623) #34	ZBTB40 (ENSPPRG00000021468) #35	WNT4 (ENSPPRG00000021723) #36	ENSPPRG00000022022 ##37
lion	MODERN SPECIES	8	SRSF10 (ENSPLOG00000014940) #7	PNRC2 (ENSPLOG00000014964) #8	ENSPLOG00000014980 #9	CNR2 (ENSPLOG00000015018) #10	FUCA1 (ENSPLOG00000015034) #11	HMGCL (ENSPLOG00000015136) #12	GALE (ENSPLOG00000015230) #13	LYPLA2 (ENSPLOG00000015293) #14	PITHD1 (ENSPLOG00000015464) #15	ELOA (ENSPLOG00000015554) #16	RPL11 (ENSPLOG00000007468) #17	ENSPLOG00000007539	ID3 (ENSPLOG00000007632) #18	E2F2 (ENSPLOG00000007656) #19	ASAP3 (ENSPLOG00000007718) #21	ENSPLOG00000007941 #22	ZNF436 (ENSPLOG00000007968) #23	HNRNPR (ENSPLOG00000008006) #24	HTR1D (ENSPLOG00000008052) #25	LUZP1 (ENSPLOG00000008068) #26	KDM1A (ENSPLOG00000008107) #27	TEX46 (ENSPLOG00000008164) #28	LACTBL1 (ENSPLOG00000008191) #29	EPHB2 (ENSPLOG00000008273) #30	C1QB (ENSPLOG00000008431) #31	C1QC (ENSPLOG00000008450) #32	C1QA (ENSPLOG00000008464) #33	EPHA8 (ENSPLOG00000008492) #34	ZBTB40 (ENSPLOG00000008590) #35	WNT4 (ENSPLOG00000008637) #36	ENSPLOG00000008684 #37
Tiger	MODERN SPECIES	187	IFNLR1 (ENSPTIG00000001878)	IL22RA1 (ENSPTIG00000010118)	MYOM3 (ENSPTIG00000011472)	SRSF10 (ENSPTIG00000014137) #7	ENSPTIG00000017652 #9	FUCA1 (ENSPTIG00000018718) #11	HMGCL (ENSPTIG00000019236) #12	GALE (ENSPTIG00000020604) #13	LYPLA2 (ENSPTIG00000021650) #14	ENSPTIG00000021824 #15	ELOA (ENSPTIG00000021949) #16	RPL11 (ENSPTIG00000004366) #17	ENSPTIG00000006939	E2F2 (ENSPTIG00000007443) #19	ASAP3 (ENSPTIG00000008013) #21	TCEA3 (ENSPTIG00000014285) #22	ZNF436 (ENSPTIG00000015061) #23	HNRNPR (ENSPTIG00000015469) #24	HTR1D (ENSPTIG00000005001) #25	LUZP1 (ENSPTIG00000017930) #26	KDM1A (ENSPTIG00000019129) #27	TEX46 (ENSPTIG00000020873) #28	LACTBL1 (ENSPTIG00000021405) #29	EPHB2 (ENSPTIG00000021556) #30	C1QB (ENSPTIG00000007497) #31	C1QC (ENSPTIG00000007570) #32	C1QA (ENSPTIG00000008161) #33	EPHA8 (ENSPTIG00000009325) #34	ZBTB40 (ENSPTIG00000010874) #35	ENSPTIG00000015552 ##37	ENSPTIG00000017247
Cat	MODERN SPECIES	239	MYOM3 (ENSFCAG00000006117)	SRSF10 (ENSFCAG00000045556) #7	PNRC2 (ENSFCAG00000052022) #8	ENSFCAG00000041805 #9	CNR2 (ENSFCAG00000012895) #10	FUCA1 (ENSFCAG00000007927) #11	GALE (ENSFCAG00000011819) #13	LYPLA2 (ENSFCAG00000031177) #14	PITHD1 (ENSFCAG00000043044) #15	ELOA (ENSFCAG00000011818) #16	ENSFCAG00000050364	ENSFCAG00000048182	ID3 (ENSFCAG00000045832) #18	E2F2 (ENSFCAG00000011650) #19	ASAP3 (ENSFCAG00000011649) #21	TCEA3 (ENSFCAG00000011648) #22	ZNF436 (ENSFCAG00000035272) #23	HNRNPR (ENSFCAG00000019123) #24	HTR1D (ENSFCAG00000011645)	LUZP1 (ENSFCAG00000013804) #26	KDM1A (ENSFCAG00000013801) #27	TEX46 (ENSFCAG00000046020) #28	LACTBL1 (ENSFCAG00000044149) #29	EPHB2 (ENSFCAG00000038675) #30	C1QB (ENSFCAG00000000543) #31	C1QC (ENSFCAG00000040814) #32	C1QA (ENSFCAG00000030671) #33	EPHA8 (ENSFCAG00000026563) #34	ZBTB40 (ENSFCAG00000028182) #35	WNT4 (ENSFCAG00000040613) #36	ENSFCAG00000004853 #37
Felidae	ANCESTRAL SPECIES																	ENSGT00940000157034.kb #22
Panthera	ANCESTRAL SPECIES																	ENSGT00940000157034.kb #22
Panthera_a	ANCESTRAL SPECIES	1	ENSGT00390000000217	ENSGT00940000153259.a.b	ENSGT00940000160405	ENSGT00940000155238	ENSGT00950000183003.a.a.b	ENSGT00390000003094	ENSGT00660000095541.a.a	ENSGT00390000013968	ENSGT00940000160517	ENSGT00950000183148.b.b	ENSGT01100000263540.A.a	ENSGT00940000160793	ENSGT00940000158550	ENSGT00440000039984.a	ENSGT00940000160277	ENSGT00940000157034.kb #22	ENSGT00950000183147.B	ENSGT00940000154755.e.b	ENSGT00940000163410.k	ENSGT00940000154755.e.a	ENSGT00940000161877.n	ENSGT00940000163249	ENSGT00950000182865.b.a.b.b.a.b	ENSGT00940000162294	ENSGT00940000165454	ENSGT00940000162636.B	ENSGT00910000144356	ENSGT00900000141212	ENSGT00390000005826.a.b	ENSGT00870000136554	ENSGT00940000162041
lion	MODERN SPECIES	3	EDAR (ENSPLOG00000000113)	SH3RF3 (ENSPLOG00000000136)	SEPTIN10 (ENSPLOG00000000161)	SOWAHC (ENSPLOG00000000181)	NANP (ENSPLOG00000000195)	NINL (ENSPLOG00000000216)	ENSPLOG00000000237	GINS1 (ENSPLOG00000000243)	ABHD12 (ENSPLOG00000000259)	PYGB (ENSPLOG00000000286)	ENTPD6 (ENSPLOG00000000325)	VSX1 (ENSPLOG00000000431)	ACSS1 (ENSPLOG00000000456)	APMAP (ENSPLOG00000000494)	CST7 (ENSPLOG00000000513)	ENSPLOG00000000534 #22	SYNDIG1 (ENSPLOG00000000543)	ENSPLOG00000000559	CST3 (ENSPLOG00000000650)	CST9L (ENSPLOG00000000670)	ENSPLOG00000000686	CST8 (ENSPLOG00000000695)	ENSPLOG00000000715	ENSPLOG00000000735	CST11 (ENSPLOG00000000758)	CSTL1 (ENSPLOG00000000776)	NAPB (ENSPLOG00000000809)	GZF1 (ENSPLOG00000000839)	NXT1 (ENSPLOG00000000844)	CD93 (ENSPLOG00000000855)	THBD (ENSPLOG00000000869)
Caniformia	ANCESTRAL SPECIES	2	ENSGT00990000204354	ENSGT00530000063881.a.b.e.b.a #8	ENSGT01060000248564.a.b #10	ENSGT00440000035378.c #11	ENSGT00940000158484 #12	ENSGT00940000158000 #13	ENSGT00940000156197 #14	ENSGT00490000043398 #15	ENSGT00390000002428.a.g.a #16	ENSGT00910000144211.n.a #17	ENSGT00940000162741.i.a	ENSGT00980000202934	ENSGT00940000160504 #18	ENSGT00940000160992 #19	ENSGT00940000161085 #21	ENSGT00940000157034 #22	ENSGT00940000153587.b #23	ENSGT00940000153511.a #24	ENSGT00940000154484.B.a.b #25	ENSGT00950000182852.A.b #26	ENSGT00940000157193 #27	ENSGT00390000007769 #28	ENSGT00450000040404.a #29	ENSGT00940000155503 #30	ENSGT00940000161091 #31	ENSGT00940000161227 #32	ENSGT00940000162143 #33	ENSGT00940000160469 #34	ENSGT00930000151052 #35	ENSGT00940000159654 #36	ENSGT00940000153675.a.a.b.f.t ##37
Caniformia_b	ANCESTRAL SPECIES	1	ENSGT00530000063881.a.b.e.b.b #8	ENSGT00990000204354	ENSGT01060000248564.a.b #10	ENSGT00440000035378.c #11	ENSGT00940000158484 #12	ENSGT00940000158000 #13	ENSGT00940000156197 #14	ENSGT00490000043398 #15	ENSGT00390000002428.a.g.a #16	ENSGT00910000144211.n.a #17	ENSGT00940000162741.i.a	ENSGT00980000202934	ENSGT00940000160504 #18	ENSGT00940000160992 #19	ENSGT00940000161085 #21	ENSGT00940000157034 #22	ENSGT00940000153587.b #23	ENSGT00940000153511.a #24	ENSGT01010000222287.B.b.a.b.a	ENSGT00950000182852.A.b #26	ENSGT00940000157193 #27	ENSGT00390000007769 #28	ENSGT00450000040404.a #29	ENSGT00940000155503 #30	ENSGT00940000161091 #31	ENSGT00940000161227 #32	ENSGT00940000162143 #33	ENSGT00940000160469 #34	ENSGT00930000151052 #35	ENSGT00940000159654 #36	ENSGT00940000153675.a.a.b.f.t ##37
Ursidae	ANCESTRAL SPECIES		ENSGT00530000063881.a.b.f #8	ENSGT01100000263986 #9	ENSGT01060000248564.a.b #10	ENSGT00440000035378.c #11	ENSGT00940000158484 #12	ENSGT00940000158000 #13	ENSGT00940000156197 #14	ENSGT00490000043398 #15	ENSGT00390000002428.a.g.a #16	ENSGT00910000144211.n.a #17	ENSGT00940000162741.i.a	ENSGT00980000202934	ENSGT00940000160504.b #18	ENSGT00940000160992 #19	ENSGT00940000161085 #21	ENSGT00940000157034 #22	ENSGT00940000153587.b #23	ENSGT00940000153511.a #24	ENSGT00940000154484.B.a.b #25	ENSGT00950000182852.A.b #26	ENSGT00940000157193 #27	ENSGT00390000007769 #28	ENSGT00450000040404.a #29	ENSGT00940000155503 #30	ENSGT00940000161091 #31	ENSGT00940000161227.f #32	ENSGT00940000162143 #33	ENSGT00940000160469 #34	ENSGT00930000151052 #35	ENSGT00940000159654 #36	ENSGT00940000169199
Ursus	ANCESTRAL SPECIES		ENSGT00940000154450 #7	ENSGT00530000063881.a.b.f #8	ENSGT01060000248564.a.b #10	ENSGT00440000035378.c #11	ENSGT00940000158484 #12	ENSGT00940000158000 #13	ENSGT00940000156197 #14	ENSGT00490000043398 #15	ENSGT00390000002428.a.g.a #16	ENSGT00910000144211.n.a #17	ENSGT00940000162741.i.a	ENSGT00980000202934	ENSGT00940000160504.b #18	ENSGT00940000160992 #19	ENSGT00940000161085 #21	ENSGT00940000157034 #22	ENSGT00950000182890.B.b.l	ENSGT00940000153511.a #24	ENSGT00940000154484.B.a.b #25	ENSGT00950000182852.A.b #26	ENSGT00940000157193 #27	ENSGT00390000007769 #28	ENSGT00450000040404.a #29	ENSGT00940000155503 #30	ENSGT00940000161091 #31	ENSGT00940000161227.f #32	ENSGT00940000162143 #33	ENSGT00940000160469 #34	ENSGT00930000151052 #35	ENSGT00940000159654 #36	ENSGT00940000153675.a.a.b.f.t ##37
American black bear	MODERN SPECIES	3371															ASAP3 (ENSUAMG00000027056) #21	TCEA3 (ENSUAMG00000027052) #22	ENSUAMG00000027051	HNRNPR (ENSUAMG00000027050) #24
Polar bear	MODERN SPECIES	189	IL22RA1 (ENSUMAG00000013154)	MYOM3 (ENSUMAG00000013158)	SRSF10 (ENSUMAG00000013183) #7	PNRC2 (ENSUMAG00000013185) #8	FUCA1 (ENSUMAG00000013190) #11	HMGCL (ENSUMAG00000013193) #12	LYPLA2 (ENSUMAG00000013201) #14	PITHD1 (ENSUMAG00000013205) #15	ELOA (ENSUMAG00000013208) #16	RPL11 (ENSUMAG00000013210) #17	ENSUMAG00000013211	ENSUMAG00000013242	ID3 (ENSUMAG00000013244) #18	E2F2 (ENSUMAG00000013249) #19	ENSUMAG00000013272 #21	TCEA3 (ENSUMAG00000013280) #22	ENSUMAG00000013288	HNRNPR (ENSUMAG00000013292) #24	HTR1D (ENSUMAG00000013296) #25	LUZP1 (ENSUMAG00000013303) #26	KDM1A (ENSUMAG00000013305) #27	TEX46 (ENSUMAG00000013311) #28	ENSUMAG00000013315 #29	EPHB2 (ENSUMAG00000013332) #30	C1QB (ENSUMAG00000013490) #31	C1QC (ENSUMAG00000013493) #32	ENSUMAG00000013498 #33	ENSUMAG00000013499 #33	ZBTB40 (ENSUMAG00000013539) #35	WNT4 (ENSUMAG00000013673) #36	ENSUMAG00000013677 ##37
Giant Panda	MODERN SPECIES	11	SRSF10 (ENSAMEG00000009869) #7	PNRC2 (ENSAMEG00000020205) #8	ENSAMEG00000027433 #9	CNR2 (ENSAMEG00000020204) #10	FUCA1 (ENSAMEG00000009835) #11	HMGCL (ENSAMEG00000009804) #12	GALE (ENSAMEG00000009764) #13	LYPLA2 (ENSAMEG00000009741) #14	PITHD1 (ENSAMEG00000009738) #15	ELOA (ENSAMEG00000009709) #16	RPL11 (ENSAMEG00000009704) #17	ENSAMEG00000009677	ID3 (ENSAMEG00000009673) #18	E2F2 (ENSAMEG00000009662) #19	ASAP3 (ENSAMEG00000009594) #21	TCEA3 (ENSAMEG00000009579) #22	ZNF436 (ENSAMEG00000009576) #23	HNRNPR (ENSAMEG00000009537) #24	HTR1D (ENSAMEG00000020218) #25	LUZP1 (ENSAMEG00000014945) #26	KDM1A (ENSAMEG00000014887) #27	TEX46 (ENSAMEG00000029370) #28	LACTBL1 (ENSAMEG00000014880) #29	EPHB2 (ENSAMEG00000014794) #30	C1QB (ENSAMEG00000014789) #31	C1QC (ENSAMEG00000014787) #32	C1QA (ENSAMEG00000014779) #33	EPHA8 (ENSAMEG00000014652) #34	ZBTB40 (ENSAMEG00000014635) #35	ENSAMEG00000014620	CDC42 (ENSAMEG00000014602) ##37
Mustelinae	ANCESTRAL SPECIES		ENSGT00940000158669	ENSGT00940000154450 #7	ENSGT00530000063881.a.b.e.b.b #8	ENSGT00990000204354	ENSGT01060000248564.a.b #10	ENSGT00440000035378.c #11	ENSGT00940000158484 #12	ENSGT00940000158000 #13	ENSGT00940000156197 #14	ENSGT00490000043398 #15	ENSGT00390000002428.a.g.a #16	ENSGT00910000144211.n.a #17	ENSGT00940000160504 #18	ENSGT00940000160992 #19	ENSGT00940000161085 #21	ENSGT00940000157034 #22	ENSGT00940000153587.b #23	ENSGT00940000153511.a.o #24	ENSGT01010000222287.B.b.a.b.a	ENSGT00950000182852.A.b #26	ENSGT00940000157193 #27	ENSGT00390000007769 #28	ENSGT00450000040404.a #29	ENSGT00940000155503 #30	ENSGT00940000161091 #31	ENSGT00940000161227 #32	ENSGT00940000162143 #33	ENSGT00940000160469 #34	ENSGT00930000151052 #35	ENSGT00940000159654 #36	ENSGT00940000153675.a.a.a.b #37
American mink	MODERN SPECIES	9	SRSF10 (ENSNVIG00000023044) #7	ENSNVIG00000023043	ENSNVIG00000023042 #8	ENSNVIG00000023040	CNR2 (ENSNVIG00000023039) #10	FUCA1 (ENSNVIG00000023036) #11	HMGCL (ENSNVIG00000023029) #12	GALE (ENSNVIG00000023020) #13	LYPLA2 (ENSNVIG00000023016) #14	PITHD1 (ENSNVIG00000023015) #15	ELOA (ENSNVIG00000023012) #16	ENSNVIG00000023007 #17	ID3 (ENSNVIG00000023006) #18	E2F2 (ENSNVIG00000023003) #19	ASAP3 (ENSNVIG00000022722) #21	TCEA3 (ENSNVIG00000022716) #22	ZNF436 (ENSNVIG00000022710) #23	ENSNVIG00000022697 #24	ENSNVIG00000022694	LUZP1 (ENSNVIG00000022689) #26	KDM1A (ENSNVIG00000022665) #27	TEX46 (ENSNVIG00000022654) #28	LACTBL1 (ENSNVIG00000022648) #29	EPHB2 (ENSNVIG00000022604) #30	C1QB (ENSNVIG00000022599) #31	C1QC (ENSNVIG00000022588) #32	C1QA (ENSNVIG00000022581) #33	EPHA8 (ENSNVIG00000022572) #34	ZBTB40 (ENSNVIG00000022559) #35	WNT4 (ENSNVIG00000022542) #36	CDC42 (ENSNVIG00000022529) ##37
Ferret	MODERN SPECIES	167	GRHL3 (ENSMPUG00000015840)	IFNLR1 (ENSMPUG00000015842)	IL22RA1 (ENSMPUG00000015843)	MYOM3 (ENSMPUG00000015844)	SRSF10 (ENSMPUG00000015845) #7	CNR2 (ENSMPUG00000018822) #10	FUCA1 (ENSMPUG00000015846) #11	HMGCL (ENSMPUG00000015847) #12	GALE (ENSMPUG00000015848) #13	LYPLA2 (ENSMPUG00000015860) #14	PITHD1 (ENSMPUG00000015871) #15	ELOA (ENSMPUG00000015876) #16	ID3 (ENSMPUG00000015877) #18	E2F2 (ENSMPUG00000015878) #19	ASAP3 (ENSMPUG00000015880) #21	TCEA3 (ENSMPUG00000015883) #22	ZNF436 (ENSMPUG00000015896) #23	ENSMPUG00000015898 #24	ENSMPUG00000018825	LUZP1 (ENSMPUG00000015914) #26	KDM1A (ENSMPUG00000015915) #27	ENSMPUG00000015937 #28	LACTBL1 (ENSMPUG00000015938) #29	EPHB2 (ENSMPUG00000015942) #30	ENSMPUG00000015946	C1QB (ENSMPUG00000015948) #31	C1QC (ENSMPUG00000015952) #32	EPHA8 (ENSMPUG00000015957) #34	ZBTB40 (ENSMPUG00000015961) #35	WNT4 (ENSMPUG00000015964) #36	ENSMPUG00000015999 #37
Canidae	ANCESTRAL SPECIES	14	ENSGT00940000158669	ENSGT00940000154450 #7	ENSGT00530000063881.a.b.e.b.b #8	ENSGT01060000248564.a.b #10	ENSGT00440000035378.c #11	ENSGT00940000158484 #12	ENSGT00940000158000 #13	ENSGT00940000156197 #14	ENSGT00490000043398 #15	ENSGT00390000002428.a.g.a #16	ENSGT00910000144211.n.a #17	ENSGT00940000162741.i.a	ENSGT00940000160504 #18	ENSGT00940000160992 #19	ENSGT00940000161085 #21	ENSGT00940000157034 #22	ENSGT00940000153587.b #23	ENSGT00940000153511.a #24	ENSGT00940000154484.B.a.b #25	ENSGT00950000182852.A.b #26	ENSGT00940000157193 #27	ENSGT00390000007769 #28	ENSGT00450000040404.a #29	ENSGT00940000155503 #30	ENSGT00940000161091 #31	ENSGT00940000161227 #32	ENSGT00940000162143 #33	ENSGT00940000160469 #34	ENSGT00930000151052 #35	ENSGT00940000159654 #36	ENSGT00940000153675.a.a.a.b #37
Red fox	MODERN SPECIES	92	MYOM3 (ENSVVUG00000026907)	SRSF10 (ENSVVUG00000026904) #7	PNRC2 (ENSVVUG00000026903) #8	CNR2 (ENSVVUG00000026902) #10	FUCA1 (ENSVVUG00000026900) #11	HMGCL (ENSVVUG00000026898) #12	GALE (ENSVVUG00000026896) #13	LYPLA2 (ENSVVUG00000026893) #14	PITHD1 (ENSVVUG00000026890) #15	ELOA (ENSVVUG00000026888) #16	RPL11 (ENSVVUG00000026887) #17	ENSVVUG00000026886	ID3 (ENSVVUG00000026885) #18	E2F2 (ENSVVUG00000026884) #19	ASAP3 (ENSVVUG00000026882) #21	TCEA3 (ENSVVUG00000026879) #22	ZNF436 (ENSVVUG00000026877)	HNRNPR (ENSVVUG00000026876) #24	HTR1D (ENSVVUG00000026875) #25	LUZP1 (ENSVVUG00000026869) #26	KDM1A (ENSVVUG00000026002) #27	TEX46 (ENSVVUG00000025950) #28	LACTBL1 (ENSVVUG00000025947) #29	EPHB2 (ENSVVUG00000025928) #30	C1QB (ENSVVUG00000025926) #31	C1QC (ENSVVUG00000025923) #32	C1QA (ENSVVUG00000025920) #33	EPHA8 (ENSVVUG00000025905) #34	ZBTB40 (ENSVVUG00000025752) #35
Canis_lupus	ANCESTRAL SPECIES	6	ENSGT00940000158669	ENSGT00940000154450 #7	ENSGT00530000063881.a.b.e.b.b #8	ENSGT01060000248564.a.b #10	ENSGT00440000035378.c #11	ENSGT00940000158484 #12	ENSGT00940000158000 #13	ENSGT00940000156197 #14	ENSGT00490000043398 #15	ENSGT00390000002428.a.g.a #16	ENSGT00910000144211.n.a #17	ENSGT00940000162741.i.a	ENSGT00940000160504 #18	ENSGT00940000160992 #19	ENSGT00940000161085 #21	ENSGT00940000157034 #22	ENSGT00940000153587.b #23	ENSGT00940000153511.a #24	ENSGT00940000154484.B.a.b #25	ENSGT00950000182852.A.b #26	ENSGT00940000157193 #27	ENSGT00390000007769 #28	ENSGT00450000040404.a #29	ENSGT00940000155503 #30	ENSGT00940000161091 #31	ENSGT00940000161227 #32	ENSGT00940000162143 #33	ENSGT00940000160469 #34	ENSGT00930000151052 #35	ENSGT00940000159654 #36	ENSGT00940000153675.a.a.b.f.t ##37
Dog	DUPLICATION
Dog	MODERN SPECIES	11	IL22RA1 (ENSCAFG00845014526)	MYOM3 (ENSCAFG00845014559)	SRSF10 (ENSCAFG00845014602) #7	ENSCAFG00845014636 #8	CNR2 (ENSCAFG00845014681) #10	FUCA1 (ENSCAFG00845014722) #11	HMGCL (ENSCAFG00845014812) #12	GALE (ENSCAFG00845014844) #13	LYPLA2 (ENSCAFG00845014869) #14	PITHD1 (ENSCAFG00845014919) #15	RPL11 (ENSCAFG00845014952) #16	ENSCAFG00845015043	ID3 (ENSCAFG00845015085) #18	E2F2 (ENSCAFG00845015124) #19	ASAP3 (ENSCAFG00845015178) #21	TCEA3 (ENSCAFG00845015290) #22	ZNF436 (ENSCAFG00845015390) #23	HNRNPR (ENSCAFG00845015456) #24	HTR1D (ENSCAFG00845015510)	LUZP1 (ENSCAFG00845015540) #26	KDM1A (ENSCAFG00845000177) #27	TEX46 (ENSCAFG00845000271) #28	LACTBL1 (ENSCAFG00845000283) #29	EPHB2 (ENSCAFG00845000323) #30	C1QB (ENSCAFG00845000358) #31	C1QC (ENSCAFG00845000378) #32	C1QA (ENSCAFG00845000400) #33	EPHA8 (ENSCAFG00845000509) #34	ZBTB40 (ENSCAFG00845000670) #35	WNT4 (ENSCAFG00845000755) #36	ENSCAFG00845000796 ##37
Dog	MODERN SPECIES	15	ZNF445 (ENSCAFG00845019305)	ENSCAFG00845019227	ENSCAFG00845029250	NANP (ENSCAFG00845029217)	NINL (ENSCAFG00845029110)	GINS1 (ENSCAFG00845029067)	ENSCAFG00845029035	ABHD12 (ENSCAFG00845028992)	PYGB (ENSCAFG00845028916)	ENTPD6 (ENSCAFG00845028707)	VSX1 (ENSCAFG00845028643)	ACSS1 (ENSCAFG00845028598)	APMAP (ENSCAFG00845028549)	ENSCAFG00845028509	ENSCAFG00845028470	ENSCAFG00845028430 #22	SYNDIG1 (ENSCAFG00845028405)	ENSCAFG00845028353	ENSCAFG00845028318	ENSCAFG00845028282	ENSCAFG00845028258
Dingo	DUPLICATION
Dingo	MODERN SPECIES	41	MYOM3 (ENSCAFG00020020819)	SRSF10 (ENSCAFG00020020795) #7	ENSCAFG00020020794 #8	CNR2 (ENSCAFG00020020792) #10	FUCA1 (ENSCAFG00020020481) #11	HMGCL (ENSCAFG00020020448) #12	GALE (ENSCAFG00020020426) #13	LYPLA2 (ENSCAFG00020020050) #14	PITHD1 (ENSCAFG00020020030) #15	ELOA (ENSCAFG00020020022) #16	RPL11 (ENSCAFG00020020012) #17	ENSCAFG00020020007	ID3 (ENSCAFG00020020003) #18	E2F2 (ENSCAFG00020019988) #19	ASAP3 (ENSCAFG00020019759) #21	TCEA3 (ENSCAFG00020019703) #22	ENSCAFG00020019697	ENSCAFG00020019630 #24	HTR1D (ENSCAFG00020019625) #25	LUZP1 (ENSCAFG00020019616) #26	KDM1A (ENSCAFG00020019613) #27	TEX46 (ENSCAFG00020019612) #28	LACTBL1 (ENSCAFG00020019607) #29	EPHB2 (ENSCAFG00020019605) #30	C1QB (ENSCAFG00020019603) #31	C1QC (ENSCAFG00020019601) #32	C1QA (ENSCAFG00020019600) #33	EPHA8 (ENSCAFG00020019592) #34	ZBTB40 (ENSCAFG00020019562) #35	WNT4 (ENSCAFG00020019560) #36	ENSCAFG00020019559 #37
Dingo	MODERN SPECIES	326	TCAIM (ENSCAFG00020005698)	ZNF445 (ENSCAFG00020005703)	ENSCAFG00020005711	ENSCAFG00020005712	ENSCAFG00020005719	NINL (ENSCAFG00020005723)	GINS1 (ENSCAFG00020005786)	ENSCAFG00020005810	PYGB (ENSCAFG00020005902)	ENTPD6 (ENSCAFG00020005916)	VSX1 (ENSCAFG00020005925)	ACSS1 (ENSCAFG00020005947)	APMAP (ENSCAFG00020006264)	CST7 (ENSCAFG00020006277)	ENSCAFG00020006285	ENSCAFG00020006286 #22	SYNDIG1 (ENSCAFG00020006293)	ENSCAFG00020006309	ENSCAFG00020006310	CST9L (ENSCAFG00020006315)
Eulipotyphla	ANCESTRAL SPECIES	456															ENSGT00940000161085 #21	ENSGT00940000157034 #22	ENSGT00940000153587.b #23
Common shrew	MODERN SPECIES	1850															ASAP3 (ENSSARG00000012188) #21	TCEA3 (ENSSARG00000012157) #22	ZNF436 (ENSSARG00000012155) #23
Hedgehog	MODERN SPECIES	7869															ASAP3 (ENSEEUG00000015802) #21	TCEA3 (ENSEEUG00000015776) #22	ENSEEUG00000015719
Atlantogenata	ANCESTRAL SPECIES	4	ENSGT00940000158669	ENSGT00940000154450.b #7	ENSGT00530000063881.a.b #8	ENSGT01060000248564.a.b #10	ENSGT00440000035378.c #11	ENSGT00940000158484 #12	ENSGT00940000158000 #13	ENSGT00940000156197 #14	ENSGT00490000043398 #15	ENSGT00390000002428.a #16	ENSGT00910000144211.n.a #17	ENSGT00940000162741.i.a	ENSGT00940000160504 #18	ENSGT00940000160992 #19	ENSGT00940000161085 #21	ENSGT00940000157034 #22	ENSGT00940000153587.b #23	ENSGT00940000153511.a #24	ENSGT01010000222287.B.b.a.b.a	ENSGT00940000163614	ENSGT00950000182852.A.b #26	ENSGT00940000157193 #27	ENSGT00390000007769 #28	ENSGT00450000040404.a #29	ENSGT00940000155503 #30	ENSGT00940000161091 #31	ENSGT00940000161227 #32	ENSGT00940000162143 #33	ENSGT00940000160469 #34	ENSGT00930000151052 #35	ENSGT00940000159654 #36
Xenarthra	ANCESTRAL SPECIES	27	ENSGT00510000048978	ENSGT00940000161366	ENSGT00940000158669	ENSGT00940000154450.b #7	ENSGT00530000063881.a.b #8	ENSGT01060000248564.a.b #10	ENSGT00440000035378.c #11	ENSGT00940000158484 #12	ENSGT00940000158000 #13	ENSGT00940000156197 #14	ENSGT00490000043398 #15	ENSGT00910000144211.n.a #17	ENSGT00940000160504 #18	ENSGT00940000160992 #19	ENSGT00940000161085 #21	ENSGT00940000157034 #22	ENSGT00940000153104.e.b.b	ENSGT00940000153587.b #23	ENSGT00940000153511.a #24	ENSGT00940000163614	ENSGT00950000182852.A.b #26	ENSGT00940000157193 #27	ENSGT00390000007769 #28
Sloth	MODERN SPECIES	10715																TCEA3 (ENSCHOG00000009821) #22
Armadillo	MODERN SPECIES	2239	ENSDNOG00000038570	IL22RA1 (ENSDNOG00000045320)	MYOM3 (ENSDNOG00000012772)	ENSDNOG00000044047 #7	PNRC2 (ENSDNOG00000023948) #8	CNR2 (ENSDNOG00000011342) #10	ENSDNOG00000011323 #11	HMGCL (ENSDNOG00000038631) #12	GALE (ENSDNOG00000011299) #13	LYPLA2 (ENSDNOG00000011285) #14	PITHD1 (ENSDNOG00000011267) #15	RPL11 (ENSDNOG00000011230) #17	ID3 (ENSDNOG00000033725) #18	E2F2 (ENSDNOG00000034861) #19	ASAP3 (ENSDNOG00000002631) #21	TCEA3 (ENSDNOG00000030804) #22	ENSDNOG00000015883	HNRNPR (ENSDNOG00000011594) #24	ENSDNOG00000011879	LUZP1 (ENSDNOG00000013386) #26	KDM1A (ENSDNOG00000013361) #27	ENSDNOG00000047692 #28
Afrotheria	ANCESTRAL SPECIES	15	ENSGT00940000158669	ENSGT00940000154450.b #7	ENSGT00530000063881.a.b #8	ENSGT01060000248564.a.b #10	ENSGT00440000035378.c #11	ENSGT00940000158484 #12	ENSGT00940000158000 #13	ENSGT00940000156197 #14	ENSGT00490000043398 #15	ENSGT00390000002428.a #16	ENSGT00910000144211.n.a #17	ENSGT00940000162741.i.a	ENSGT00940000160504 #18	ENSGT00940000160992 #19	ENSGT00940000161085 #21	ENSGT00940000157034 #22	ENSGT00940000153587.b #23	ENSGT00940000153511.a #24	ENSGT01010000222287.B.b.a.b.a	ENSGT00950000182852.A.b #26	ENSGT00940000157193 #27	ENSGT00450000040404.a #29	ENSGT00940000155503 #30	ENSGT00940000161091 #31	ENSGT00940000161227 #32	ENSGT00940000162143 #33	ENSGT00940000160469 #34	ENSGT00930000151052 #35	ENSGT00940000159654 #36	ENSGT00940000153675.a.a.a.b #37
Afrotheria_a	ANCESTRAL SPECIES	15	ENSGT00940000158669	ENSGT00940000154450.b #7	ENSGT00530000063881.a.b #8	ENSGT01060000248564.a.b #10	ENSGT00440000035378.c #11	ENSGT00940000158484 #12	ENSGT00940000158000 #13	ENSGT00940000156197 #14	ENSGT00490000043398 #15	ENSGT00390000002428.a #16	ENSGT00910000144211.n.a #17	ENSGT00940000162741.i.a	ENSGT00940000160504 #18	ENSGT00940000160992 #19	ENSGT00940000161085 #21	ENSGT00940000157034 #22	ENSGT00940000153587.b #23	ENSGT00940000153511.a #24	ENSGT01010000222287.B.b.a.b.a	ENSGT00950000182852.A.b #26	ENSGT00940000157193 #27	ENSGT00450000040404.a #29	ENSGT00940000155503 #30	ENSGT00940000161227 #32	ENSGT00940000162143 #33	ENSGT00940000160469 #34	ENSGT00930000151052 #35	ENSGT00940000159654 #36	ENSGT00940000153675.a.a.a.b #37
Elephant	MODERN SPECIES	332	MYOM3 (ENSLAFG00000003712)	SRSF10 (ENSLAFG00000026905) #7	PNRC2 (ENSLAFG00000014701) #8	CNR2 (ENSLAFG00000012676) #10	FUCA1 (ENSLAFG00000015305) #11	HMGCL (ENSLAFG00000017326) #12	GALE (ENSLAFG00000017319) #13	LYPLA2 (ENSLAFG00000017315) #14	PITHD1 (ENSLAFG00000030836) #15	ENSLAFG00000017306 #16	RPL11 (ENSLAFG00000030853) #17	ENSLAFG00000028081	ID3 (ENSLAFG00000030385) #18	E2F2 (ENSLAFG00000004607) #19	ASAP3 (ENSLAFG00000012812) #21	TCEA3 (ENSLAFG00000012805) #22	ENSLAFG00000012795	HNRNPR (ENSLAFG00000012793) #24	ENSLAFG00000017765	LUZP1 (ENSLAFG00000007991) #26	KDM1A (ENSLAFG00000007981) #27	LACTBL1 (ENSLAFG00000021452) #29	EPHB2 (ENSLAFG00000006334) #30	C1QC (ENSLAFG00000011980) #32	C1QA (ENSLAFG00000011973) #33	EPHA8 (ENSLAFG00000011971) #34	ZBTB40 (ENSLAFG00000006483) #35	WNT4 (ENSLAFG00000031555) #36	ENSLAFG00000005817
Hyrax	MODERN SPECIES	1959															ASAP3 (ENSPCAG00000010721) #21	TCEA3 (ENSPCAG00000010635) #22	ZNF436 (ENSPCAG00000010535) #23	HNRNPR (ENSPCAG00000010462) #24
Tenrec	MODERN SPECIES	2410																TCEA3 (ENSETEG00000012084) #22	ENSETEG00000012079
Marsupialia	ANCESTRAL SPECIES	10	ENSGT00940000158669	ENSGT00940000154450 #7	ENSGT00530000063881.a.b #8	ENSGT01060000248564.a.b #10	ENSGT00440000035378.c #11	ENSGT00940000158484 #12	ENSGT00940000158000 #13	ENSGT00940000156197 #14	ENSGT00490000043398 #15	ENSGT00390000002428.a.e.a #16	ENSGT00910000144211.n.a #17	ENSGT00940000160894.d	ENSGT00940000160504 #18	ENSGT00940000160992 #19	ENSGT00940000161085 #21	ENSGT00940000157034 #22	ENSGT00940000153587.b #23	ENSGT00940000153511.a #24	ENSGT00940000163614	ENSGT00950000182852.A.b #26	ENSGT00940000157193 #27	ENSGT00390000007769 #28	ENSGT00450000040404.a #29	ENSGT00940000155503 #30	ENSGT00940000161091 #31	ENSGT00940000161227 #32	ENSGT00940000162143 #33	ENSGT00940000160469 #34	ENSGT00930000151052 #35	ENSGT00940000159654 #36	ENSGT00940000153675.a.a.b ##37
Opossum	MODERN SPECIES	3	ENSMODG00000044411	ENSMODG00000043090	ENSMODG00000046918	ENSMODG00000044348	ENSMODG00000027711	ENSMODG00000037420	ENSMODG00000048683	ENSMODG00000047376	ENSMODG00000043161	ENSMODG00000022869	ENSMODG00000011921	ENSMODG00000028382	OR56B4 (ENSMODG00000011933)	ENSMODG00000045926	ENSMODG00000044219	TCEA3 (ENSMODG00000016146) #22	ENSMODG00000028616	ENSMODG00000016145	HNRNPR (ENSMODG00000016144) #24	LUZP1 (ENSMODG00000016143) #26	KDM1A (ENSMODG00000016138) #27	ENSMODG00000029736 #28	LACTBL1 (ENSMODG00000023966) #29	EPHB2 (ENSMODG00000016114) #30	ENSMODG00000041746	C1QC (ENSMODG00000016105) #32	C1QA (ENSMODG00000047318) #33	EPHA8 (ENSMODG00000016101) #34	ZBTB40 (ENSMODG00000016092) #35	WNT4 (ENSMODG00000044786) #36	CDC42 (ENSMODG00000016078) ##37
Marsupialia_b	ANCESTRAL SPECIES	4	ENSGT00940000154450 #7	ENSGT00530000063881.a.b #8	ENSGT01060000248564.a.b #10	ENSGT00440000035378.c.i #11	ENSGT00440000035378.c.j #11	ENSGT00940000158484 #12	ENSGT00940000158000 #13	ENSGT00940000156197 #14	ENSGT00490000043398 #15	ENSGT00390000002428.a.e.a #16	ENSGT00910000144211.n.a #17	ENSGT00940000160894.d	ENSGT00940000160504 #18	ENSGT00940000160992 #19	ENSGT00940000161085 #21	ENSGT00940000157034 #22	ENSGT00940000153587.b #23	ENSGT00940000153511.a #24	ENSGT00940000163614	ENSGT00950000182852.A.b #26	ENSGT00940000157193 #27	ENSGT00390000007769 #28	ENSGT00450000040404.a #29	ENSGT00940000155503 #30	ENSGT00940000161091 #31	ENSGT00940000161227 #32	ENSGT00940000162143 #33	ENSGT00940000160469 #34	ENSGT00930000151052 #35	ENSGT00940000159654 #36	ENSGT00940000153675.a.a.b ##37
Diprotodontia	ANCESTRAL SPECIES	3	ENSGT00940000154450 #7	ENSGT00530000063881.a.b #8	ENSGT01060000248564.a.b #10	ENSGT00440000035378.c.i #11	ENSGT00440000035378.c.j #11	ENSGT00940000158484 #12	ENSGT00940000158000 #13	ENSGT00940000156197 #14	ENSGT00490000043398 #15	ENSGT00390000002428.a.e.a #16	ENSGT00910000144211.n.a #17	ENSGT00940000160894.d	ENSGT00940000160504 #18	ENSGT00940000160992 #19	ENSGT00940000161085 #21	ENSGT00940000157034 #22	ENSGT00940000153587.b #23	ENSGT00940000153511.a #24	ENSGT00940000163614	ENSGT00950000182852.A.b #26	ENSGT00940000157193 #27	ENSGT00390000007769 #28	ENSGT00450000040404.a #29	ENSGT00940000155503 #30	ENSGT00940000161091 #31	ENSGT00940000161227 #32	ENSGT00940000162143 #33	ENSGT00940000160469 #34	ENSGT00930000151052 #35	ENSGT00940000159654 #36	ENSGT00940000153675.a.a.b ##37
Diprotodontia_a	ANCESTRAL SPECIES	4	ENSGT00940000154450 #7	ENSGT00530000063881.a.b #8	ENSGT01060000248564.a.b #10	ENSGT00440000035378.c.i #11	ENSGT00440000035378.c.j #11	ENSGT00940000158484 #12	ENSGT00940000158000 #13	ENSGT00940000156197 #14	ENSGT00490000043398 #15	ENSGT00390000002428.a.e.a #16	ENSGT00910000144211.n.a #17	ENSGT00940000160894.d	ENSGT00940000160504 #18	ENSGT00940000160992 #19	ENSGT00940000161085 #21	ENSGT00940000157034 #22	ENSGT00940000153587.b #23	ENSGT00940000153511.a #24	ENSGT00940000163614	ENSGT00950000182852.A.b #26	ENSGT00940000157193 #27	ENSGT00390000007769 #28	ENSGT00450000040404.a #29	ENSGT00940000155503 #30	ENSGT00940000161091 #31	ENSGT00940000161227 #32	ENSGT00940000162143 #33	ENSGT00940000160469 #34	ENSGT00930000151052 #35	ENSGT00940000159654 #36	ENSGT00940000153675.a.a.b ##37
koala	MODERN SPECIES	14	IL22RA1 (ENSPCIG00000014266)	MYOM3 (ENSPCIG00000014267)	SRSF10 (ENSPCIG00000014270) #7	PNRC2 (ENSPCIG00000014271) #8	CNR2 (ENSPCIG00000014279) #10	ENSPCIG00000014285 #11	ENSPCIG00000014280 #11	HMGCL (ENSPCIG00000014290) #12	GALE (ENSPCIG00000014297) #13	LYPLA2 (ENSPCIG00000014305) #14	ENSPCIG00000014309 #16	ENSPCIG00000004594 ##17	ID3 (ENSPCIG00000033298) #18	E2F2 (ENSPCIG00000030630) #19	ASAP3 (ENSPCIG00000026165) #21	TCEA3 (ENSPCIG00000026166) #22	ZNF436 (ENSPCIG00000026167) #23	HNRNPR (ENSPCIG00000026168) #24	ENSPCIG00000026170	LUZP1 (ENSPCIG00000026173) #26	KDM1A (ENSPCIG00000026174) #27	ENSPCIG00000026175 #28	ENSPCIG00000034946	LACTBL1 (ENSPCIG00000026176) #29	EPHB2 (ENSPCIG00000026177) #30	C1QB (ENSPCIG00000026420) #31	ENSPCIG00000026421 #32	EPHA8 (ENSPCIG00000026424) #34	ZBTB40 (ENSPCIG00000026425) #35	WNT4 (ENSPCIG00000032945) #36	ENSPCIG00000026434
Common wonbat	MODERN SPECIES	1084	SRSF10 (ENSVURG00010023125) #7	PNRC2 (ENSVURG00010023129) #8	CNR2 (ENSVURG00010023132) #10	ENSVURG00010023134 #11	ENSVURG00010023154 #11	HMGCL (ENSVURG00010023158) #12	GALE (ENSVURG00010023164) #13	ENSVURG00010023175 #14	PITHD1 (ENSVURG00010023178) #15	ENSVURG00010023182 #16	RPL11 (ENSVURG00010023184) #17	ENSVURG00010023186	ID3 (ENSVURG00010023189) #18	E2F2 (ENSVURG00010023191) #19	ASAP3 (ENSVURG00010023221) #21	TCEA3 (ENSVURG00010023300) #22	HNRNPR (ENSVURG00010023303) #24	ENSVURG00010023309	LUZP1 (ENSVURG00010023311) #26	KDM1A (ENSVURG00010023356) #27	LACTBL1 (ENSVURG00010023556) #29	EPHB2 (ENSVURG00010023557) #30	C1QB (ENSVURG00010023562) #31	C1QC (ENSVURG00010023564) #32	C1QA (ENSVURG00010023565) #33	EPHA8 (ENSVURG00010023568) #34	ZBTB40 (ENSVURG00010023571) #35	ENSVURG00010023574	WNT4 (ENSVURG00010023575) #36	CDC42 (ENSVURG00010023579) ##37	ENSVURG00010023584
Wallaby	MODERN SPECIES	3318																TCEA3 (ENSMEUG00000004983) #22
Tasmanian devil	MODERN SPECIES	2	SRSF10 (ENSSHAG00000022691) #7	PNRC2 (ENSSHAG00000028722) #8	CNR2 (ENSSHAG00000021282) #10	ENSSHAG00000003797 #11	ENSSHAG00000026348 #11	HMGCL (ENSSHAG00000028160) #12	GALE (ENSSHAG00000029887) #13	LYPLA2 (ENSSHAG00000021428) #14	PITHD1 (ENSSHAG00000030435) #15	ENSSHAG00000006165 #16	RPL11 (ENSSHAG00000006767) #17	ENSSHAG00000007025	ID3 (ENSSHAG00000029268) #18	ENSSHAG00000021561 #19	ASAP3 (ENSSHAG00000009150) #21	TCEA3 (ENSSHAG00000009516) #22	ENSSHAG00000029105	HNRNPR (ENSSHAG00000010091) #24	ENSSHAG00000024651	LUZP1 (ENSSHAG00000025254) #26	KDM1A (ENSSHAG00000011939) #27	ENSSHAG00000012269 #28	LACTBL1 (ENSSHAG00000030447) #29	EPHB2 (ENSSHAG00000012536) #30	C1QB (ENSSHAG00000028244) #31	C1QC (ENSSHAG00000021711) #32	ENSSHAG00000024110 #33	EPHA8 (ENSSHAG00000014595) #34	ZBTB40 (ENSSHAG00000014880) #35	ENSSHAG00000027198	ENSSHAG00000031737
Platypus	DUPLICATION
Platypus	MODERN SPECIES	7	ENSOANG00000000149	ENSOANG00000038747	ENSOANG00000000475	DNAJC8 (ENSOANG00000048514)	ENSOANG00000049622	SESN2 (ENSOANG00000000634)	MED18 (ENSOANG00000036333)	PHACTR4 (ENSOANG00000001179)	RCC1 (ENSOANG00000001180)	TRNAU1AP (ENSOANG00000038042)	TAF12 (ENSOANG00000050475)	GMEB1 (ENSOANG00000006127)	YTHDF2 (ENSOANG00000006124)	ENSOANG00000037089 #18	ENSOANG00000014967 #19	ENSOANG00000039060 #22	ENSOANG00000047775 #22	ZNF436 (ENSOANG00000043950) #23	ENSOANG00000003962	HNRNPR (ENSOANG00000003961) #24	ENSOANG00000008954	LUZP1 (ENSOANG00000040319) #26	KDM1A (ENSOANG00000004000) #27	ENSOANG00000028498 #28	ZMPSTE24 (ENSOANG00000012761)	RLF (ENSOANG00000037712)	ENSOANG00000046059	CTPS1 (ENSOANG00000004378)	ENSOANG00000004379	ENSOANG00000011247	EYA3 (ENSOANG00000011248)
Platypus	MODERN SPECIES	7	ENSOANG00000038747	ENSOANG00000000475	DNAJC8 (ENSOANG00000048514)	ENSOANG00000049622	SESN2 (ENSOANG00000000634)	MED18 (ENSOANG00000036333)	PHACTR4 (ENSOANG00000001179)	RCC1 (ENSOANG00000001180)	TRNAU1AP (ENSOANG00000038042)	TAF12 (ENSOANG00000050475)	GMEB1 (ENSOANG00000006127)	YTHDF2 (ENSOANG00000006124)	ENSOANG00000037089 #18	ENSOANG00000014967 #19	ENSOANG00000039060 #22	ENSOANG00000047775 #22	ZNF436 (ENSOANG00000043950) #23	ENSOANG00000003962	HNRNPR (ENSOANG00000003961) #24	ENSOANG00000008954	LUZP1 (ENSOANG00000040319) #26	KDM1A (ENSOANG00000004000) #27	ENSOANG00000028498 #28	ZMPSTE24 (ENSOANG00000012761)	RLF (ENSOANG00000037712)	ENSOANG00000046059	CTPS1 (ENSOANG00000004378)	ENSOANG00000004379	ENSOANG00000011247	EYA3 (ENSOANG00000011248)	XKR8 (ENSOANG00000036599)
Sauria	ANCESTRAL SPECIES	23	ENSGT00940000157833	ENSGT00960000189438	ENSGT00940000155019.a.a	ENSGT00940000156139.ab	ENSGT00940000162094	ENSGT00940000164873	ENSGT00390000002144	ENSGT00410000025596.a.b	ENSGT01100000263839	ENSGT00940000156761	ENSGT00940000167209	ENSGT00940000160504 #18	ENSGT00940000161879	ENSGT00940000160992 #19	ENSGT00940000161085 #21	ENSGT00940000157034 #22	ENSGT00940000157669	ENSGT00940000155543	ENSGT00940000157582	ENSGT00390000003312	ENSGT00950000183168.B.a	ENSGT00940000160073	ENSGT00940000163923.e	ENSGT00940000163923.f	ENSGT00940000157554	ENSGT00390000018883	ENSGT00950000182962.b.a	ENSGT01060000248564.b.a.a.a ##10	ENSGT00530000063929.a.b	ENSGT00940000157531	ENSGT00940000159398
Lepidosauria	ANCESTRAL SPECIES	18	ENSGT00530000063698.b	ENSGT00940000157833	ENSGT00940000155019.a.a	ENSGT00940000156139.ab	ENSGT00940000162094	ENSGT00940000164873	ENSGT00390000002144	ENSGT00410000025596.a.b	ENSGT01100000263839	ENSGT00940000156761	ENSGT00940000167209	ENSGT00940000160504 #18	ENSGT00940000161879	ENSGT00940000160992.b #19	ENSGT00940000161085 #21	ENSGT00940000157034 #22	ENSGT00940000157669	ENSGT00940000155543	ENSGT00940000157582	ENSGT00390000003312	ENSGT00950000183168.B.a	ENSGT00940000160073	ENSGT00940000163282.k.a	ENSGT00940000163923.e	ENSGT00940000163923.f	ENSGT00940000157554	ENSGT00390000018883	ENSGT00950000182962.b.a	ENSGT01060000248564.b.a.a.a ##10	ENSGT00530000063929.a.b	ENSGT00940000157531
Episquamata	ANCESTRAL SPECIES	7	ENSGT00530000063698.b	ENSGT00940000157833	ENSGT00940000155019.a.a	ENSGT00940000156139.ab	ENSGT00940000162094	ENSGT00940000164873	ENSGT00390000002144	ENSGT00410000025596.a.b	ENSGT01100000263839	ENSGT00940000156761	ENSGT00940000167209	ENSGT00940000160504 #18	ENSGT00940000161879	ENSGT00940000160992.b #19	ENSGT00940000161085 #21	ENSGT00940000157034 #22	ENSGT00940000157669	ENSGT00940000155543	ENSGT00940000157582	ENSGT00390000003312	ENSGT00950000183168.B.a	ENSGT00940000160073	ENSGT00940000163282.k.a	ENSGT00940000163923.e	ENSGT00940000163923.f	ENSGT00940000157554	ENSGT00390000018883	ENSGT00950000182962.b.a	ENSGT01060000248564.b.a.a.a ##10	ENSGT00530000063929.a.b	ENSGT00940000157531
Toxicofera	ANCESTRAL SPECIES	24	ENSGT00940000157833	ENSGT00940000155019.a.a	ENSGT00940000156139.ab	ENSGT00940000162094	ENSGT00940000164873	ENSGT00390000002144	ENSGT00410000025596.a.b	ENSGT01100000263839	ENSGT00940000156761	ENSGT00940000167209	ENSGT00940000160504 #18	ENSGT00940000161879	ENSGT00940000160992.a #19	ENSGT00940000160992.b #19	ENSGT00940000161085 #21	ENSGT00940000157034 #22	ENSGT00940000157669	ENSGT00940000155543	ENSGT00940000157582	ENSGT00390000003312	ENSGT00950000183168.B.a	ENSGT00940000160073	ENSGT00940000163923.e	ENSGT00940000163923.f	ENSGT00940000157554	ENSGT00390000018883	ENSGT00950000182962.b.a	ENSGT01060000248564.b.a.a.a ##10	ENSGT00530000063929.a.b	ENSGT00940000159398	ENSGT00940000160932
Elapidae	ANCESTRAL SPECIES	9	ENSGT00940000155019.a.a	ENSGT00940000156139.ab	ENSGT01010000229478	ENSGT00940000162094	ENSGT00940000164873	ENSGT00390000002144	ENSGT00410000025596.a.b	ENSGT00940000156761.f	ENSGT01100000263839	ENSGT00940000156761.e	ENSGT00940000167209	ENSGT00940000160504 #18	ENSGT00940000161879	ENSGT00940000160992.b #19	ENSGT00940000161085 #21	ENSGT00940000157034 #22	ENSGT00940000157669	ENSGT00940000155543	ENSGT00940000157582.a	ENSGT00390000003312	ENSGT00950000183168.B.a	ENSGT00940000160073	ENSGT00940000163923.e	ENSGT00940000163923.f	ENSGT00940000157554	ENSGT00390000018883	ENSGT00950000182962.b.a	ENSGT01060000248564.b.a.a.a ##10	ENSGT00530000063929.a.b	ENSGT00940000159398.g	ENSGT00940000160932
Elapidae_a	ANCESTRAL SPECIES	15	ENSGT00940000156139.ab	ENSGT01010000229478	ENSGT00940000162094	ENSGT00940000164873	ENSGT00390000002144	ENSGT00940000157334	ENSGT00410000025596.a.b	ENSGT01100000263839	ENSGT00940000156761.e	ENSGT00940000167209	ENSGT00940000160504 #18	ENSGT00940000161879	ENSGT00940000160992.a #19	ENSGT00940000160992.b #19	ENSGT00940000161085 #21	ENSGT00940000157034 #22	ENSGT00940000157669	ENSGT00940000155543	ENSGT00940000157582.a	ENSGT00390000003312	ENSGT00950000183168.B.a	ENSGT00940000160073	ENSGT00940000163923.e	ENSGT00940000163923.f	ENSGT00940000157554	ENSGT00390000018883	ENSGT00950000182962.b.a	ENSGT01060000248564.b.a.a.a ##10	ENSGT00960000189365	ENSGT00940000159398.g	ENSGT00940000160932
Acanthophiinae	ANCESTRAL SPECIES	22	ENSGT00940000155019.a.a	ENSGT00940000156139.ab	ENSGT01010000229478	ENSGT00940000162094	ENSGT00940000164873	ENSGT00390000002144	ENSGT00410000025596.a.b	ENSGT01100000263839	ENSGT00940000156761.e	ENSGT00940000167209	ENSGT00940000160504 #18	ENSGT00940000161879	ENSGT00940000160992.a #19	ENSGT00940000160992.b #19	ENSGT00940000161085 #21	ENSGT00940000157034 #22	ENSGT00940000157669	ENSGT00940000155543	ENSGT00940000157582.a	ENSGT00390000003312	ENSGT00950000183168.B.a	ENSGT00940000160073	ENSGT00940000163923.e	ENSGT00940000163923.f	ENSGT00940000157554	ENSGT00390000018883	ENSGT00950000182962.b.a	ENSGT01060000248564.b.a.a.a ##10	ENSGT00960000189365	ENSGT00940000159398.g	ENSGT00940000160932
Mainland tiger snake	DUPLICATION
Mainland tiger snake	MODERN SPECIES	80	ENSNSUG00000014049	ENSNSUG00000014047	TMEM200B (ENSNSUG00000014046)	EPB41 (ENSNSUG00000014045)	ENSNSUG00000014044	TRNAU1AP (ENSNSUG00000014043)	ENSNSUG00000014024	TAF12 (ENSNSUG00000014023)	GMEB1 (ENSNSUG00000014015)	ENSNSUG00000014014	ENSNSUG00000014013	ENSNSUG00000014011	ID3 (ENSNSUG00000014010) #18	E2F2 (ENSNSUG00000014009) #19	ASAP3 (ENSNSUG00000013924) #21	ENSNSUG00000013923 #22	ENSNSUG00000013922 #22	OPRD1 (ENSNSUG00000013918)	RCC1 (ENSNSUG00000013917)	ENSNSUG00000013912	ENSNSUG00000013911	MED18 (ENSNSUG00000013910)	FAM76A (ENSNSUG00000013908)	ENSNSUG00000013907	ENSNSUG00000013906	ENSNSUG00000013905	AHDC1 (ENSNSUG00000013903)	WASF2 (ENSNSUG00000013901)	GPR3 (ENSNSUG00000013900) ##10	ENSNSUG00000013899	SYTL1 (ENSNSUG00000013898)
Mainland tiger snake	MODERN SPECIES	80	ENSNSUG00000014047	TMEM200B (ENSNSUG00000014046)	EPB41 (ENSNSUG00000014045)	ENSNSUG00000014044	TRNAU1AP (ENSNSUG00000014043)	ENSNSUG00000014024	TAF12 (ENSNSUG00000014023)	GMEB1 (ENSNSUG00000014015)	ENSNSUG00000014014	ENSNSUG00000014013	ENSNSUG00000014011	ID3 (ENSNSUG00000014010) #18	E2F2 (ENSNSUG00000014009) #19	ASAP3 (ENSNSUG00000013924) #21	ENSNSUG00000013923 #22	ENSNSUG00000013922 #22	OPRD1 (ENSNSUG00000013918)	RCC1 (ENSNSUG00000013917)	ENSNSUG00000013912	ENSNSUG00000013911	MED18 (ENSNSUG00000013910)	FAM76A (ENSNSUG00000013908)	ENSNSUG00000013907	ENSNSUG00000013906	ENSNSUG00000013905	AHDC1 (ENSNSUG00000013903)	WASF2 (ENSNSUG00000013901)	GPR3 (ENSNSUG00000013900) ##10	ENSNSUG00000013899	SYTL1 (ENSNSUG00000013898)	ENSNSUG00000013897
Eastern brown snake	DUPLICATION
Eastern brown snake	MODERN SPECIES	19	TMEM200B (ENSPTXG00000016686)	EPB41 (ENSPTXG00000005359)	TRNAU1AP (ENSPTXG00000005360)	ENSPTXG00000005364	ENSPTXG00000005365	ENSPTXG00000005366	TAF12 (ENSPTXG00000005367)	GMEB1 (ENSPTXG00000005369)	ENSPTXG00000005370	ENSPTXG00000005374	ID3 (ENSPTXG00000005376) #18	CATSPER4 (ENSPTXG00000005377)	ENSPTXG00000005389 #19	ENSPTXG00000005393 #19	ASAP3 (ENSPTXG00000005395) #21	ENSPTXG00000005396 #22	ENSPTXG00000005398 #22	OPRD1 (ENSPTXG00000005399)	RCC1 (ENSPTXG00000005400)	PHACTR4 (ENSPTXG00000005405)	MED18 (ENSPTXG00000005408)	SESN2 (ENSPTXG00000005410)	FAM76A (ENSPTXG00000005413)	ENSPTXG00000005416	ENSPTXG00000005419	FGR (ENSPTXG00000005421)	AHDC1 (ENSPTXG00000005424)	WASF2 (ENSPTXG00000005425)	GPR3 (ENSPTXG00000005428) ##10	ENSPTXG00000005429	MAP3K6 (ENSPTXG00000005442)
Eastern brown snake	MODERN SPECIES	19	EPB41 (ENSPTXG00000005359)	TRNAU1AP (ENSPTXG00000005360)	ENSPTXG00000005364	ENSPTXG00000005365	ENSPTXG00000005366	TAF12 (ENSPTXG00000005367)	GMEB1 (ENSPTXG00000005369)	ENSPTXG00000005370	ENSPTXG00000005374	ID3 (ENSPTXG00000005376) #18	CATSPER4 (ENSPTXG00000005377)	ENSPTXG00000005389 #19	ENSPTXG00000005393 #19	ASAP3 (ENSPTXG00000005395) #21	ENSPTXG00000005396 #22	ENSPTXG00000005398 #22	OPRD1 (ENSPTXG00000005399)	RCC1 (ENSPTXG00000005400)	PHACTR4 (ENSPTXG00000005405)	MED18 (ENSPTXG00000005408)	SESN2 (ENSPTXG00000005410)	FAM76A (ENSPTXG00000005413)	ENSPTXG00000005416	ENSPTXG00000005419	FGR (ENSPTXG00000005421)	AHDC1 (ENSPTXG00000005424)	WASF2 (ENSPTXG00000005425)	GPR3 (ENSPTXG00000005428) ##10	ENSPTXG00000005429	MAP3K6 (ENSPTXG00000005442)	SYTL1 (ENSPTXG00000005487)
Blue-lipped sea krait	MODERN SPECIES	876															ENSLLTG00000015690	TCEA3 (ENSLLTG00000015745) #22
Indian cobra	MODERN SPECIES	11	ENSNNAG00000005215	ENSNNAG00000005058	TRNAU1AP (ENSNNAG00000005026)	ENSNNAG00000004983	ENSNNAG00000004959	ENSNNAG00000004943	TAF12 (ENSNNAG00000004920)	ENSNNAG00000004892	GMEB1 (ENSNNAG00000004843)	YTHDF2 (ENSNNAG00000004825)	ID3 (ENSNNAG00000004796) #18	ENSNNAG00000004723	ENSNNAG00000004700 #19	ENSNNAG00000004689 #19	ASAP3 (ENSNNAG00000004607) #21	TCEA3 (ENSNNAG00000004558) #22	OPRD1 (ENSNNAG00000004544)	RCC1 (ENSNNAG00000004513)	MED18 (ENSNNAG00000004457)	PHACTR4 (ENSNNAG00000004401)	SESN2 (ENSNNAG00000004318)	FAM76A (ENSNNAG00000004205)	ENSNNAG00000004121	ENSNNAG00000004086	FGR (ENSNNAG00000004005)	AHDC1 (ENSNNAG00000003964)	WASF2 (ENSNNAG00000003926)	GPR3 (ENSNNAG00000003904) ##10	CD164L2 (ENSNNAG00000003877)	MAP3K6 (ENSNNAG00000003752)	SYTL1 (ENSNNAG00000003725)
Lizard	MODERN SPECIES	1495															ENSACAG00000004855 #21	ENSACAG00000005034 #22	OPRD1 (ENSACAG00000040477)	ENSACAG00000005128
Laterata	ANCESTRAL SPECIES	27	ENSGT00940000158264.b	ENSGT00530000063698.b	ENSGT00940000157833	ENSGT00940000155019.a.a	ENSGT00940000156139.ab	ENSGT00940000162094	ENSGT00940000164873	ENSGT00390000002144	ENSGT00410000025596.a.b	ENSGT00940000156761	ENSGT00940000167209	ENSGT00940000160504 #18	ENSGT00940000161879	ENSGT00940000160992.b #19	ENSGT00940000161085 #21	ENSGT00940000157034 #22	ENSGT00940000157669	ENSGT00940000155543	ENSGT00940000157582	ENSGT00390000003312	ENSGT00950000183168.B.a	ENSGT00940000160073	ENSGT00940000163282.k.a	ENSGT00940000163923.e	ENSGT00940000163923.f	ENSGT00390000018883	ENSGT00950000182962.b.a	ENSGT01060000248564.b.a.a.a ##10	ENSGT00530000063929.a.b	ENSGT00940000157531	ENSGT00940000159398
Argentine black and white tegu	DUPLICATION
Argentine black and white tegu	MODERN SPECIES	53	ENSSMRG00000002848	ENSSMRG00000002846	ENSSMRG00000002843	RAB42 (ENSSMRG00000002842)	ENSSMRG00000002838	TAF12 (ENSSMRG00000002837)	ENSSMRG00000002828	GMEB1 (ENSSMRG00000002821)	YTHDF2 (ENSSMRG00000002820)	ENSSMRG00000002803	ID3 (ENSSMRG00000002801) #18	ENSSMRG00000002742	E2F2 (ENSSMRG00000002739) #19	ASAP3 (ENSSMRG00000002736) #21	ENSSMRG00000002735 #22	ENSSMRG00000002734 #22	OPRD1 (ENSSMRG00000002731)	RCC1 (ENSSMRG00000002729)	PHACTR4 (ENSSMRG00000002722)	MED18 (ENSSMRG00000002592)	SESN2 (ENSSMRG00000002553)	FAM76A (ENSSMRG00000002548)	ENSSMRG00000002539	ENSSMRG00000002537	ENSSMRG00000002524	ENSSMRG00000002513	AHDC1 (ENSSMRG00000002496)	WASF2 (ENSSMRG00000002478)	GPR3 (ENSSMRG00000002473) ##10	CD164L2 (ENSSMRG00000002466)	ENSSMRG00000002456
Argentine black and white tegu	MODERN SPECIES	53	TRNAU1AP (ENSSMRG00000002863)	ENSSMRG00000002848	ENSSMRG00000002846	ENSSMRG00000002843	RAB42 (ENSSMRG00000002842)	ENSSMRG00000002838	TAF12 (ENSSMRG00000002837)	ENSSMRG00000002828	GMEB1 (ENSSMRG00000002821)	YTHDF2 (ENSSMRG00000002820)	ENSSMRG00000002803	ID3 (ENSSMRG00000002801) #18	ENSSMRG00000002742	E2F2 (ENSSMRG00000002739) #19	ASAP3 (ENSSMRG00000002736) #21	ENSSMRG00000002735 #22	ENSSMRG00000002734 #22	OPRD1 (ENSSMRG00000002731)	RCC1 (ENSSMRG00000002729)	PHACTR4 (ENSSMRG00000002722)	MED18 (ENSSMRG00000002592)	SESN2 (ENSSMRG00000002553)	FAM76A (ENSSMRG00000002548)	ENSSMRG00000002539	ENSSMRG00000002537	ENSSMRG00000002524	ENSSMRG00000002513	AHDC1 (ENSSMRG00000002496)	WASF2 (ENSSMRG00000002478)	GPR3 (ENSSMRG00000002473) ##10	CD164L2 (ENSSMRG00000002466)
Common wall lizard	MODERN SPECIES	16	TMEM200B (ENSPMRG00000008642)	EPB41 (ENSPMRG00000008665)	ENSPMRG00000008737	TRNAU1AP (ENSPMRG00000008815)	RAB42 (ENSPMRG00000008831)	ENSPMRG00000008838	TAF12 (ENSPMRG00000008840)	ENSPMRG00000008846	GMEB1 (ENSPMRG00000008864)	YTHDF2 (ENSPMRG00000008884)	ENSPMRG00000008891	ENSPMRG00000008893	ENSPMRG00000008896	E2F2 (ENSPMRG00000008903) #19	ASAP3 (ENSPMRG00000008909) #21	TCEA3 (ENSPMRG00000008935) #22	ENSPMRG00000008946	OPRD1 (ENSPMRG00000008949)	RCC1 (ENSPMRG00000008955)	ENSPMRG00000008962	SYTL1 (ENSPMRG00000008979)	MAP3K6 (ENSPMRG00000008995)	ENSPMRG00000009031	CD164L2 (ENSPMRG00000009039)	GPR3 (ENSPMRG00000009045) ##10	WASF2 (ENSPMRG00000009056)	AHDC1 (ENSPMRG00000009067)	ENSPMRG00000009078	ENSPMRG00000009089	ENSPMRG00000009104	ENSPMRG00000009115
tuatara	MODERN SPECIES	973											ENSSPUG00000008174	ID3 (ENSSPUG00000008147) #18	CATSPER4 (ENSSPUG00000008125)	E2F2 (ENSSPUG00000008101) #19	ENSSPUG00000008050	TCEA3 (ENSSPUG00000008021) #22
Archelosauria	ANCESTRAL SPECIES	25	ENSGT00940000157833	ENSGT00960000189438	ENSGT00940000155019.a.a	ENSGT00940000156139.ab	ENSGT00940000162094	ENSGT00940000164873	ENSGT00390000002144	ENSGT00410000025596.a.b	ENSGT01100000263839	ENSGT00940000156761	ENSGT00940000167209	ENSGT00940000160504 #18	ENSGT00940000161879	ENSGT00940000160992 #19	ENSGT00940000161085 #21	ENSGT00940000157034 #22	ENSGT00940000157669	ENSGT00940000155543	ENSGT00940000157582	ENSGT00950000183168.B.a	ENSGT00940000160073	ENSGT00940000161215.hc.b	ENSGT00940000163282.j	ENSGT00940000163923.e	ENSGT00940000163923.f	ENSGT00940000157554	ENSGT00390000018883	ENSGT00950000182962.b.a	ENSGT01060000248564.b.a.a.a ##10	ENSGT00530000063929.a.b	ENSGT00940000157531
Archosauria	ANCESTRAL SPECIES	22	ENSGT00530000063698.b	ENSGT00940000157833	ENSGT00960000189438	ENSGT00940000155019.a.a	ENSGT00940000156139.ab	ENSGT00940000162094	ENSGT00940000164873	ENSGT00390000002144	ENSGT00410000025596.a.b	ENSGT01100000263839	ENSGT00940000156761	ENSGT00940000167209	ENSGT00940000160504 #18	ENSGT00940000160992 #19	ENSGT00940000161085 #21	ENSGT00940000157034 #22	ENSGT00940000157669	ENSGT00940000155543	ENSGT00940000157582	ENSGT00950000183168.B.a	ENSGT00940000160073	ENSGT00940000161215.hc.b	ENSGT00940000163282.j	ENSGT00940000163923.e	ENSGT00940000163923.f	ENSGT00940000157554	ENSGT00390000018883	ENSGT00950000182962.b.a	ENSGT01060000248564.b.a.a.a ##10	ENSGT00530000063929.a.b	ENSGT00940000159398
Australian saltwater crocodile	MODERN SPECIES	58	INPP5B (ENSCPRG00005002678)	SF3A3 (ENSCPRG00005002902)	FHL3 (ENSCPRG00005002908)	UTP11 (ENSCPRG00005002913)	ENSCPRG00005002914	RRAGC (ENSCPRG00005002919)	MYCBP (ENSCPRG00005002986)	GJA9 (ENSCPRG00005002991)	RHBDL2 (ENSCPRG00005002996)	CCT8L2 (ENSCPRG00005003003)	ENSCPRG00005003009	YTHDF2 (ENSCPRG00005003013)	CATSPER4 (ENSCPRG00005003024)	E2F2 (ENSCPRG00005003031) #19	ASAP3 (ENSCPRG00005003050) #21	TCEA3 (ENSCPRG00005003102) #22	OPRD1 (ENSCPRG00005003124)	RCC1 (ENSCPRG00005003145)	PHACTR4 (ENSCPRG00005003163)	SESN2 (ENSCPRG00005003191)	FAM76A (ENSCPRG00005003198)	ENSCPRG00005003204	ENSCPRG00005003220	ENSCPRG00005003223	ENSCPRG00005003225	ENSCPRG00005003238	AHDC1 (ENSCPRG00005003254)	WASF2 (ENSCPRG00005003258)	GPR3 (ENSCPRG00005003261) ##10	CD164L2 (ENSCPRG00005003266)	MAP3K6 (ENSCPRG00005003286)
Aves	ANCESTRAL SPECIES	28	ENSGT00530000063698.b	ENSGT00940000157833	ENSGT00960000189438	ENSGT00940000155019.a.a	ENSGT00940000156139.ab	ENSGT00940000162094	ENSGT00940000164873	ENSGT00390000002144	ENSGT00410000025596.a.b	ENSGT01100000263839	ENSGT00940000156761	ENSGT00940000167209	ENSGT00940000160504 #18	ENSGT00940000160992 #19	ENSGT00940000161085 #21	ENSGT00940000157034 #22	ENSGT00940000157669	ENSGT00940000155543	ENSGT00940000157582	ENSGT00950000183168.B.a	ENSGT00940000160073	ENSGT00940000163923.e	ENSGT00940000163923.f	ENSGT00940000157554	ENSGT00390000018883	ENSGT00950000182962.b.a	ENSGT01060000248564.b.a.a.a ##10	ENSGT00530000063929.a.b	ENSGT00940000159398	ENSGT00940000160932	ENSGT00390000007371
African ostrich	MODERN SPECIES	1061														CATSPER4 (ENSSCUG00000019153)	E2F2 (ENSSCUG00000019152) #19	ENSSCUG00000019151 #22	OPRD1 (ENSSCUG00000019150)	RCC1 (ENSSCUG00000019147)	PHACTR4 (ENSSCUG00000019146)	SESN2 (ENSSCUG00000019145)	FAM76A (ENSSCUG00000019144)	ENSSCUG00000019143	ENSSCUG00000019142	ENSSCUG00000019141	ENSSCUG00000019140
Neognathae	ANCESTRAL SPECIES	26	ENSGT00530000063698.b	ENSGT00940000157833	ENSGT00960000189438	ENSGT00940000155019.a.a	ENSGT00940000156139.ab	ENSGT00940000162094	ENSGT00940000164873	ENSGT00390000002144	ENSGT00410000025596.a.b	ENSGT01100000263839	ENSGT00940000156761	ENSGT00940000167209	ENSGT00940000160504 #18	ENSGT00940000160992 #19	ENSGT00940000161085 #21	ENSGT00940000157034 #22	ENSGT00940000157669	ENSGT00940000155543	ENSGT00940000157582	ENSGT00950000183168.B.a	ENSGT00940000160073	ENSGT00940000163923.e	ENSGT00940000163923.f	ENSGT00940000157554	ENSGT00390000018883	ENSGT00950000182962.b.a	ENSGT01060000248564.b.a.a.a ##10	ENSGT00530000063929.a.b	ENSGT00940000159398	ENSGT00940000160932	ENSGT00390000007371
Galloanserae	ANCESTRAL SPECIES	25	ENSGT00530000063698.b	ENSGT00940000157833	ENSGT00960000189438	ENSGT00940000155019.a.a	ENSGT00940000156139.ab	ENSGT00940000162094	ENSGT00940000164873	ENSGT00390000002144	ENSGT00410000025596.a.b	ENSGT01100000263839	ENSGT00940000156761	ENSGT00940000167209	ENSGT00940000160504 #18	ENSGT00940000160992 #19	ENSGT00940000161085 #21	ENSGT00940000157034 #22	ENSGT00940000157669	ENSGT00940000155543	ENSGT00940000157582	ENSGT00950000183168.B.a	ENSGT00940000160073	ENSGT00940000163923.e	ENSGT00940000163923.f	ENSGT00940000157554	ENSGT00390000018883	ENSGT00950000182962.b.a	ENSGT01060000248564.b.a.a.a ##10	ENSGT00530000063929.a.b	ENSGT00940000159398	ENSGT00960000191085	ENSGT00940000160932
Anatidae	ANCESTRAL SPECIES	21	ENSGT00940000156213	ENSGT00940000158264.b	ENSGT00530000063698.b	ENSGT00940000157833	ENSGT00960000189438	ENSGT00940000155019.a.a	ENSGT00940000156139.ab	ENSGT00940000162094	ENSGT00940000164873	ENSGT00390000002144	ENSGT00410000025596.a.b	ENSGT01100000263839	ENSGT00940000156761	ENSGT00940000160992 #19	ENSGT00940000161085 #21	ENSGT00940000157034 #22	ENSGT00940000157669	ENSGT00940000155543	ENSGT00940000157582	ENSGT00950000183168.B.a	ENSGT00940000160073	ENSGT00940000163923.f.b	ENSGT00390000018883	ENSGT00950000182962.b.a	ENSGT01060000248564.b.a.a.a ##10	ENSGT00530000063929.a.b	ENSGT00940000159398	ENSGT00390000007371	ENSGT00950000182900.B	ENSGT00940000156338	ENSGT00940000160747
Pink-footed goose	MODERN SPECIES	73														E2F2 (ENSABRG00000005175) #19	ASAP3 (ENSABRG00000003095) #21	TCEA3 (ENSABRG00000002935) #22	OPRD1 (ENSABRG00000002932)	RCC1 (ENSABRG00000002909)	PHACTR4 (ENSABRG00000002835)	SESN2 (ENSABRG00000002796)	FAM76A (ENSABRG00000002772)	ENSABRG00000002732	ENSABRG00000002709	ENSABRG00000002676	AHDC1 (ENSABRG00000002665)	ENSABRG00000002652	WASF2 (ENSABRG00000002634)	GPR3 (ENSABRG00000002622) ##10	CD164L2 (ENSABRG00000002608)	MAP3K6 (ENSABRG00000002099)	TMEM222 (ENSABRG00000002037)
Duck	MODERN SPECIES	15	SRSF4 (ENSAPLG00000006595)	ENSAPLG00000016290	TMEM200B (ENSAPLG00000023489)	EPB41 (ENSAPLG00000016409)	ENSAPLG00000002488	TRNAU1AP (ENSAPLG00000002606)	RAB42 (ENSAPLG00000017350)	ENSAPLG00000002659	TAF12 (ENSAPLG00000002881)	ENSAPLG00000016740	GMEB1 (ENSAPLG00000002955)	YTHDF2 (ENSAPLG00000020468)	E2F2 (ENSAPLG00000021411) #19	ENSAPLG00000031239 #21	ENSAPLG00000018663	TCEA3 (ENSAPLG00000025037) #22	OPRD1 (ENSAPLG00000002972)	RCC1 (ENSAPLG00000026840)	PHACTR4 (ENSAPLG00000019553)	ENSAPLG00000022334	SESN2 (ENSAPLG00000010959)	FAM76A (ENSAPLG00000004037)	ENSAPLG00000022698	WASF2 (ENSAPLG00000010236)	ENSAPLG00000015805	ENSAPLG00000016993	TMEM222 (ENSAPLG00000021290)	WDTC1 (ENSAPLG00000015930)	SLC9A1 (ENSAPLG00000016147)	TENT5B (ENSAPLG00000001361)	ENSAPLG00000025590
Phasianidae	ANCESTRAL SPECIES	24	ENSGT00940000157715	ENSGT00950000182844.a.b	ENSGT00390000016613.c	ENSGT00940000157118.c.a	ENSGT00940000159312	ENSGT00940000164027	ENSGT00950000183215.c.b	ENSGT00940000164873	ENSGT00390000002144	ENSGT00410000025596.a.b	ENSGT00940000156761	ENSGT00940000167209	ENSGT00940000160504 #18	ENSGT00940000160992 #19	ENSGT00940000161085 #21	ENSGT00940000157034 #22	ENSGT00940000157669	ENSGT00940000155543	ENSGT00940000157582	ENSGT00950000183168.B.a	ENSGT00940000160073	ENSGT00940000163923.e	ENSGT00940000163923.f	ENSGT00940000157554	ENSGT00390000018883	ENSGT00950000182962.b.a	ENSGT00960000189365	ENSGT00940000159398	ENSGT00940000160932	ENSGT00390000007371	ENSGT00950000182900.B
Phasianidae_b	ANCESTRAL SPECIES	23	ENSGT00730000111390	ENSGT00940000157715	ENSGT00950000182844.a.b	ENSGT00390000016613.c	ENSGT00940000157118.c.a	ENSGT00940000159312	ENSGT00940000164027	ENSGT00950000183215.c.b	ENSGT00940000164873	ENSGT00390000002144	ENSGT00410000025596.a.b	ENSGT00940000156761	ENSGT00940000160504 #18	ENSGT00940000160992 #19	ENSGT00940000161085 #21	ENSGT00940000157034 #22	ENSGT00940000157669	ENSGT00940000155543	ENSGT00940000157582	ENSGT00950000183168.B.a	ENSGT00940000160073	ENSGT00940000163923.e	ENSGT00940000163923.f	ENSGT00940000157554	ENSGT00390000018883	ENSGT00950000182962.b.a	ENSGT00960000189365	ENSGT00940000159398	ENSGT00940000160932	ENSGT00390000007371	ENSGT00950000182900.B
Chicken	MODERN SPECIES	15	RHCE (ENSGALG00010015729)	TMEM57 (ENSGALG00010015645)	LDLRAP1 (ENSGALG00010015605)	MAN1C1 (ENSGALG00010015573)	SELENON (ENSGALG00010015516)	MTFR1L (ENSGALG00010015486)	ENSGALG00010015440	TAF12 (ENSGALG00010015384)	GMEB1 (ENSGALG00010015314)	ENSGALG00010015248	YTHDF2 (ENSGALG00010015166)	ENSGALG00010015185	ID3 (ENSGALG00010016447) #18	E2F2 (ENSGALG00010016567) #19	ASAP3 (ENSGALG00010016556) #21	TCEA3 (ENSGALG00010016543) #22	OPRD1 (ENSGALG00010016944)	RCC1 (ENSGALG00010016936)	PHACTR4 (ENSGALG00010016925)	SESN2 (ENSGALG00010016875)	FAM76A (ENSGALG00010018339)	ENSGALG00010016870	ENSGALG00010018329	FGR (ENSGALG00010016861)	AHDC1 (ENSGALG00010016852)	WASF2 (ENSGALG00010016849)	ENSGALG00010016825	MAP3K6 (ENSGALG00010016816)	SYTL1 (ENSGALG00010016809)	TMEM222 (ENSGALG00010016802)	WDTC1 (ENSGALG00010016799)
Turkey	MODERN SPECIES	17	ENSMGAG00000004949	ZBTB8OS (ENSMGAG00000004958)	ENSMGAG00000019210	ENSMGAG00000004985	ENSMGAG00000004561	ENSMGAG00000019581	ENSMGAG00000005107	ENSMGAG00000005063	FNDC5 (ENSMGAG00000005049)	ENSMGAG00000005030	ENSMGAG00000005513	AK2 (ENSMGAG00000005006)	AZIN2 (ENSMGAG00000004993)	ENSMGAG00000019031	ENSMGAG00000001477 #21	ENSMGAG00000001550 #22	E2F2 (ENSMGAG00000021602) #19	ENSMGAG00000001580	ENSMGAG00000001610	ENSMGAG00000001716	ENSMGAG00000001725	ENSMGAG00000001743	ENSMGAG00000018530	ENSMGAG00000001731	ENSMGAG00000001778	ENSMGAG00000001802	ENSMGAG00000021137	MACO1 (ENSMGAG00000001845)	ENSMGAG00000001964	ENSMGAG00000001880	ENSMGAG00000002019
Japanese quail	MODERN SPECIES	15	ENSCJPG00005016300	MACO1 (ENSCJPG00005016299)	LDLRAP1 (ENSCJPG00005016298)	MAN1C1 (ENSCJPG00005016273)	ENSCJPG00005016272	MTFR1L (ENSCJPG00005016271)	ENSCJPG00005016270	TAF12 (ENSCJPG00005016269)	ENSCJPG00005016267	GMEB1 (ENSCJPG00005016263)	YTHDF2 (ENSCJPG00005016262)	ENSCJPG00005016261	ID3 (ENSCJPG00005016260) #18	E2F2 (ENSCJPG00005016258) #19	ASAP3 (ENSCJPG00005016116) #21	TCEA3 (ENSCJPG00005016106) #22	OPRD1 (ENSCJPG00005016105)	RCC1 (ENSCJPG00005016103)	PHACTR4 (ENSCJPG00005016101)	SESN2 (ENSCJPG00005016100)	FAM76A (ENSCJPG00005016099)	ENSCJPG00005016045	ENSCJPG00005016044	FGR (ENSCJPG00005016042)	AHDC1 (ENSCJPG00005016038)	WASF2 (ENSCJPG00005016036)	ENSCJPG00005016033	ENSCJPG00005016032	TMEM222 (ENSCJPG00005016031)	WDTC1 (ENSCJPG00005016030)	SLC9A1 (ENSCJPG00005016029)
Neognathae_b	ANCESTRAL SPECIES	26	ENSGT00940000156213	ENSGT00940000158264.b	ENSGT00530000063698.b	ENSGT00940000157833	ENSGT00940000155019.a.a	ENSGT00940000156139.ab	ENSGT00940000162094	ENSGT00940000164873	ENSGT00390000002144	ENSGT00410000025596.a.b	ENSGT00940000156761	ENSGT00940000167209	ENSGT00940000160504 #18	ENSGT00940000160992 #19	ENSGT00940000161085 #21	ENSGT00940000157034 #22	ENSGT00940000157669	ENSGT00940000155543	ENSGT00940000157582	ENSGT00950000183168.B.a	ENSGT00940000160073	ENSGT00940000163923.e	ENSGT00940000163923.f	ENSGT00940000157554	ENSGT00390000018883	ENSGT00950000182962.b.a	ENSGT01060000248564.b.a.a.a ##10	ENSGT00530000063929.a.b	ENSGT00940000159398	ENSGT00940000160932	ENSGT00390000007371
Passeriformes	ANCESTRAL SPECIES	23													ENSGT00940000160504 #18	ENSGT00940000160992 #19	ENSGT00940000161085 #21	ENSGT00940000157034 #22	ENSGT00940000157669	ENSGT00940000155543	ENSGT00940000157582	ENSGT00950000183168.B.a	ENSGT00940000160073	ENSGT00940000163923.f	ENSGT00940000157554	ENSGT00390000018883	ENSGT00950000182962.b.a	ENSGT01060000248564.b.a.a.a ##10	ENSGT00530000063929.a.b	ENSGT00940000160932	ENSGT00390000007371	ENSGT00950000182900.B	ENSGT00940000156338
Great tit	MODERN SPECIES	15	NCMAP (ENSPMJG00000000242)	SRRM1 (ENSPMJG00000000218)	CLIC4 (ENSPMJG00000000208)	RUNX3 (ENSPMJG00000000197)	ENSPMJG00000000184	SYF2 (ENSPMJG00000000170)	RSRP1 (ENSPMJG00000000148)	TMEM50A (ENSPMJG00000000129)	ENSPMJG00000000112	MACO1 (ENSPMJG00000000097)	ENSPMJG00000000086	LDLRAP1 (ENSPMJG00000000050)	ID3 (ENSPMJG00000018446) #18	E2F2 (ENSPMJG00000018445) #19	ENSPMJG00000018444	TCEA3 (ENSPMJG00000018443) #22	OPRD1 (ENSPMJG00000018442)	RCC1 (ENSPMJG00000018440)	PHACTR4 (ENSPMJG00000018439)	SESN2 (ENSPMJG00000018438)	FAM76A (ENSPMJG00000018437)	ENSPMJG00000018436	FGR (ENSPMJG00000018435)	AHDC1 (ENSPMJG00000018432)	WASF2 (ENSPMJG00000018431)	ENSPMJG00000018428	SYTL1 (ENSPMJG00000018427)	TMEM222 (ENSPMJG00000018426)	WDTC1 (ENSPMJG00000018425)	SLC9A1 (ENSPMJG00000018424)	TENT5B (ENSPMJG00000018423)
Passeriformes_d	ANCESTRAL SPECIES	23													ENSGT00940000160504 #18	ENSGT00940000160992 #19	ENSGT00940000161085 #21	ENSGT00940000157034 #22	ENSGT00940000157669	ENSGT00940000155543	ENSGT00940000157582	ENSGT00950000183168.B.a	ENSGT00940000160073	ENSGT00940000163923.f	ENSGT00940000157554	ENSGT00390000018883	ENSGT00950000182962.b.a	ENSGT01060000248564.b.a.a.a ##10	ENSGT00530000063929.a.b	ENSGT00940000160932	ENSGT00390000007371	ENSGT00950000182900.B	ENSGT00940000156338
Passeriformes_g	ANCESTRAL SPECIES	22													ENSGT00940000160504 #18	ENSGT00940000160992 #19	ENSGT00940000165326	ENSGT00940000157034 #22	ENSGT00940000157669	ENSGT00940000155543	ENSGT00940000157582	ENSGT00950000183168.B.a	ENSGT00940000160073	ENSGT00940000163923.f	ENSGT00940000157554	ENSGT00390000018883	ENSGT00950000182962.b.a	ENSGT01060000248564.b.a.a.a ##10	ENSGT00530000063929.a.b	ENSGT00940000160932	ENSGT00390000007371	ENSGT00950000182900.B	ENSGT00940000156338
Passeroidea	ANCESTRAL SPECIES	22													ENSGT00940000160504 #18	ENSGT00940000160992 #19	ENSGT00940000165326	ENSGT00940000157034 #22	ENSGT00940000157669	ENSGT00940000155543	ENSGT00940000157582	ENSGT00950000183168.B.a	ENSGT00940000160073	ENSGT00940000163923.f	ENSGT00940000157554	ENSGT00390000018883	ENSGT00950000182962.b.a	ENSGT01060000248564.b.a.a.a ##10	ENSGT00530000063929.a.b	ENSGT00940000160932	ENSGT00390000007371	ENSGT00950000182900.B	ENSGT00940000156338
Common canary	MODERN SPECIES	65													ID3 (ENSSCAG00000008336) #18	E2F2 (ENSSCAG00000008329) #19	ENSSCAG00000008039	TCEA3 (ENSSCAG00000008008) #22	OPRD1 (ENSSCAG00000008006)	RCC1 (ENSSCAG00000007998)	PHACTR4 (ENSSCAG00000007987)	SESN2 (ENSSCAG00000007973)	FAM76A (ENSSCAG00000007969)	ENSSCAG00000007964	FGR (ENSSCAG00000007933)	AHDC1 (ENSSCAG00000007925)	WASF2 (ENSSCAG00000007921)	GPR3 (ENSSCAG00000007910) ##10	ENSSCAG00000007899	SYTL1 (ENSSCAG00000007895)	TMEM222 (ENSSCAG00000007892)	WDTC1 (ENSSCAG00000007881)	SLC9A1 (ENSSCAG00000007437)
Zebra finch	MODERN SPECIES	16	CTPS1 (ENSTGUG00000000831)	CITED4 (ENSTGUG00000000843)	STX12 (ENSTGUG00000000844)	PPP1R8 (ENSTGUG00000000851)	SMPDL3B (ENSTGUG00000000856)	RPA2 (ENSTGUG00000000866)	XKR8 (ENSTGUG00000000870)	EYA3 (ENSTGUG00000000872)	PTAFR (ENSTGUG00000023079)	DNAJC8 (ENSTGUG00000000890)	ENSTGUG00000000899	HNRNPR (ENSTGUG00000000880) #24	ID3 (ENSTGUG00000000904) #18	E2F2 (ENSTGUG00000000907) #19	ENSTGUG00000000911	TCEA3 (ENSTGUG00000000930) #22	OPRD1 (ENSTGUG00000000934)	RCC1 (ENSTGUG00000000940)	PHACTR4 (ENSTGUG00000000943)	SESN2 (ENSTGUG00000000945)	FAM76A (ENSTGUG00000000951)	ENSTGUG00000000955	ENSTGUG00000000957	AHDC1 (ENSTGUG00000022877)	WASF2 (ENSTGUG00000000966)	GPR3 (ENSTGUG00000000969) ##10	ENSTGUG00000023189	SYTL1 (ENSTGUG00000025002)	WDTC1 (ENSTGUG00000000973)	SLC9A1 (ENSTGUG00000000976)	TENT5B (ENSTGUG00000000977)
Medium ground finch	MODERN SPECIES	139	TENT5B (ENSGFOG00000006235)	SLC9A1 (ENSGFOG00000006232)	WDTC1 (ENSGFOG00000006223)	TMEM222 (ENSGFOG00000006214)	CD164L2 (ENSGFOG00000006209)	WASF2 (ENSGFOG00000006201)	FGR (ENSGFOG00000006174)	ENSGFOG00000006139	FAM76A (ENSGFOG00000006127)	SESN2 (ENSGFOG00000006120)	PHACTR4 (ENSGFOG00000006113)	RCC1 (ENSGFOG00000006100)	ID3 (ENSGFOG00000006093) #18	E2F2 (ENSGFOG00000006080) #19	ENSGFOG00000006066	TCEA3 (ENSGFOG00000006059) #22	OPRD1 (ENSGFOG00000006052)
Flycatcher	MODERN SPECIES	15													ID3 (ENSFALG00000010806) #18	E2F2 (ENSFALG00000010803) #19	ASAP3 (ENSFALG00000010769) #21	TCEA3 (ENSFALG00000010750) #22	RCC1 (ENSFALG00000010730)	PHACTR4 (ENSFALG00000010715)	SESN2 (ENSFALG00000010708)	ENSFALG00000002817	FGR (ENSFALG00000002793)	WASF2 (ENSFALG00000000708)	GPR3 (ENSFALG00000000702) ##10	CD164L2 (ENSFALG00000023339)	SYTL1 (ENSFALG00000000694)	WDTC1 (ENSFALG00000000691)	ENSFALG00000023022	SLC9A1 (ENSFALG00000000683)	TENT5B (ENSFALG00000014519)	KDF1 (ENSFALG00000006529)	NUDC (ENSFALG00000006516)
Neognathae_c	DUPLICATION
Neognathae_c	ANCESTRAL SPECIES																	ENSGT00940000157034.u #22
Golden eagle	MODERN SPECIES	7	TMEM200B (ENSACCG00020009062)	EPB41 (ENSACCG00020009007)	ENSACCG00020008918	TRNAU1AP (ENSACCG00020008893)	RAB42 (ENSACCG00020010898)	ENSACCG00020010889	TAF12 (ENSACCG00020010879)	ENSACCG00020010861	GMEB1 (ENSACCG00020010845)	YTHDF2 (ENSACCG00020010834)	ENSACCG00020010823	ID3 (ENSACCG00020010811) #18	E2F2 (ENSACCG00020010796) #19	ASAP3 (ENSACCG00020010776) #21	ENSACCG00020010764 #22	ENSACCG00020010744 #22	OPRD1 (ENSACCG00020010727)	RCC1 (ENSACCG00020010714)	PHACTR4 (ENSACCG00020010676)	SESN2 (ENSACCG00020010646)	FAM76A (ENSACCG00020010617)	ENSACCG00020010590	ENSACCG00020010553	ENSACCG00020010496	AHDC1 (ENSACCG00020010469)	WASF2 (ENSACCG00020010443)	GPR3 (ENSACCG00020010424) ##10	ENSACCG00020010410	MAP3K6 (ENSACCG00020010161)	SYTL1 (ENSACCG00020009888)	TMEM222 (ENSACCG00020009875)
Neognathae_c	ANCESTRAL SPECIES	10	ENSGT00940000156213	ENSGT00940000158264.b	ENSGT00530000063698.b	ENSGT00940000157833	ENSGT00940000155019.a.a	ENSGT00940000156139.ab	ENSGT00940000162094	ENSGT00940000164873	ENSGT00390000002144	ENSGT00410000025596.a.b	ENSGT00940000156761	ENSGT00940000167209	ENSGT00940000160504 #18	ENSGT00940000160992 #19	ENSGT00940000161085 #21	ENSGT00940000157034.v #22	ENSGT00940000157669	ENSGT00940000155543	ENSGT00940000157582	ENSGT00950000183168.B.a	ENSGT00940000160073	ENSGT00940000163923.e	ENSGT00940000163923.f	ENSGT00940000155462	ENSGT00940000164855	ENSGT00940000156226	ENSGT00530000063320.B	ENSGT00940000157966	ENSGT00390000007279	ENSGT00390000000510	ENSGT00390000011776
Golden eagle	MODERN SPECIES	7	ENSACCG00020009092	TMEM200B (ENSACCG00020009062)	EPB41 (ENSACCG00020009007)	ENSACCG00020008918	TRNAU1AP (ENSACCG00020008893)	RAB42 (ENSACCG00020010898)	ENSACCG00020010889	TAF12 (ENSACCG00020010879)	ENSACCG00020010861	GMEB1 (ENSACCG00020010845)	YTHDF2 (ENSACCG00020010834)	ENSACCG00020010823	ID3 (ENSACCG00020010811) #18	E2F2 (ENSACCG00020010796) #19	ASAP3 (ENSACCG00020010776) #21	ENSACCG00020010764 #22	ENSACCG00020010744 #22	OPRD1 (ENSACCG00020010727)	RCC1 (ENSACCG00020010714)	PHACTR4 (ENSACCG00020010676)	SESN2 (ENSACCG00020010646)	FAM76A (ENSACCG00020010617)	ENSACCG00020010590	ENSACCG00020010553	ENSACCG00020010496	AHDC1 (ENSACCG00020010469)	WASF2 (ENSACCG00020010443)	GPR3 (ENSACCG00020010424) ##10	ENSACCG00020010410	MAP3K6 (ENSACCG00020010161)	SYTL1 (ENSACCG00020009888)
Kakapo	MODERN SPECIES	6	SRSF10 (ENSSHBG00005005544) #7	PNRC2 (ENSSHBG00005005519) #8	LUZP1 (ENSSHBG00005005420) #26	ENSSHBG00005005399	TRNAU1AP (ENSSHBG00005000886)	ENSSHBG00005017467	TAF12 (ENSSHBG00005017463)	ENSSHBG00005017458	GMEB1 (ENSSHBG00005017456)	YTHDF2 (ENSSHBG00005017454)	ID3 (ENSSHBG00005017453) #18	ENSSHBG00005017452	E2F2 (ENSSHBG00005017450) #19	ASAP3 (ENSSHBG00005008310) #21	ENSSHBG00005007799	TCEA3 (ENSSHBG00005007790) #22	OPRD1 (ENSSHBG00005007780)	RCC1 (ENSSHBG00005007765)	PHACTR4 (ENSSHBG00005007730)	SESN2 (ENSSHBG00005007712)	FAM76A (ENSSHBG00005007686)	ENSSHBG00005007623	ENSSHBG00005007587	ENSSHBG00005007489	WASF2 (ENSSHBG00005007459)	GPR3 (ENSSHBG00005007451) ##10	CD164L2 (ENSSHBG00005007438)	TMEM222 (ENSSHBG00005007411)	WDTC1 (ENSSHBG00005007394)	SLC9A1 (ENSSHBG00005007382)	TENT5B (ENSSHBG00005007375)
Cryptodira	ANCESTRAL SPECIES	50	ENSGT00940000158264.b	ENSGT00530000063698.b	ENSGT00940000157833	ENSGT00940000155019.a.a	ENSGT00940000156139.ab	ENSGT00940000162094	ENSGT00940000164873	ENSGT00390000002144	ENSGT00410000025596.a.b	ENSGT00940000156761	ENSGT00940000167209	ENSGT00940000160504 #18	ENSGT00940000161879	ENSGT00940000160992 #19	ENSGT00940000161085 #21	ENSGT00940000157034 #22	ENSGT00990000210108	ENSGT00940000157669	ENSGT00940000155543	ENSGT00940000157582	ENSGT00950000183168.B.a	ENSGT00940000160073	ENSGT00940000161215.hc.b
Chinese turtle	MODERN SPECIES	190	EPB41 (ENSPSIG00000007374)	ENSPSIG00000007170	TRNAU1AP (ENSPSIG00000006864)	RAB42 (ENSPSIG00000006831)	ENSPSIG00000006606	TAF12 (ENSPSIG00000005932)	ENSPSIG00000005698	GMEB1 (ENSPSIG00000016715)	YTHDF2 (ENSPSIG00000016583)	ENSPSIG00000016454	ID3 (ENSPSIG00000016125) #18	ENSPSIG00000015959	E2F2 (ENSPSIG00000015227) #19	ENSPSIG00000012924	ENSPSIG00000000028	TCEA3 (ENSPSIG00000010799) #22	ENSPSIG00000009544	OPRD1 (ENSPSIG00000009356)
Testudinoidea	ANCESTRAL SPECIES	12	ENSGT00940000158264.b	ENSGT00530000063698.b	ENSGT00940000157833	ENSGT00940000155019.a.a	ENSGT00940000156139.ab	ENSGT00940000162094	ENSGT00940000164873	ENSGT00390000002144	ENSGT00410000025596.a.b	ENSGT00940000156761	ENSGT00940000167209	ENSGT00940000160504 #18	ENSGT00940000161879	ENSGT00940000160992 #19	ENSGT00940000161085 #21	ENSGT00940000157034 #22	ENSGT00990000210108	ENSGT00940000157669	ENSGT00940000155543	ENSGT00940000157582	ENSGT00950000183168.B.a	ENSGT00940000160073	ENSGT00940000161215.hc.b	ENSGT00940000163178	ENSGT00940000163282.j	ENSGT00940000163923.e.c	ENSGT00940000163923.e.d	ENSGT00940000163923.f	ENSGT00940000155462	ENSGT00940000164855	ENSGT00940000156226
Testudinidae	ANCESTRAL SPECIES	53	ENSGT00940000158264.b	ENSGT00530000063698.b	ENSGT00940000157833	ENSGT00940000155019.a.a	ENSGT00940000156139.ab	ENSGT00940000162094	ENSGT00940000164873	ENSGT00390000002144	ENSGT00410000025596.a.b	ENSGT00940000156761	ENSGT00940000167209	ENSGT00940000160504 #18	ENSGT00940000161879	ENSGT00940000160992 #19	ENSGT00940000161085 #21	ENSGT00940000157034 #22	ENSGT00940000157669	ENSGT00940000155543	ENSGT00940000157582	ENSGT00950000183168.B.a	ENSGT00940000160073	ENSGT00940000161215.hc.b	ENSGT00940000163178	ENSGT00940000163282.j	ENSGT00940000163923.e.c	ENSGT00940000163923.e.d	ENSGT00940000163923.f	ENSGT00940000157554	ENSGT00390000018883	ENSGT00950000182962.b.a	ENSGT01060000248564.b.a.a.a ##10
Goode s thornscrub tortoise	DUPLICATION
Goode s thornscrub tortoise	MODERN SPECIES	12	TMEM200B (ENSGEVG00005006276)	EPB41 (ENSGEVG00005006102)	ENSGEVG00005005901	TRNAU1AP (ENSGEVG00005005844)	RAB42 (ENSGEVG00005005806)	ENSGEVG00005005767	TAF12 (ENSGEVG00005005747)	GMEB1 (ENSGEVG00005005710)	YTHDF2 (ENSGEVG00005005693)	ENSGEVG00005005669	ID3 (ENSGEVG00005005643) #18	CATSPER4 (ENSGEVG00005005464)	E2F2 (ENSGEVG00005005385) #19	ENSGEVG00005005358 #21	ENSGEVG00005005311 #22	ENSGEVG00005005264 #22	ENSGEVG00005005245	OPRD1 (ENSGEVG00005005214)	RCC1 (ENSGEVG00005005188)	PHACTR4 (ENSGEVG00005005142)	SESN2 (ENSGEVG00005005043)	ENSGEVG00005004945	ENSGEVG00005004911	ENSGEVG00005004831	ENSGEVG00005004770	ENSGEVG00005004746	FGR (ENSGEVG00005004709)	AHDC1 (ENSGEVG00005004682)	WASF2 (ENSGEVG00005004635)	GPR3 (ENSGEVG00005004575) ##10	CD164L2 (ENSGEVG00005004553)
Goode s thornscrub tortoise	MODERN SPECIES	12	ENSGEVG00005006315	TMEM200B (ENSGEVG00005006276)	EPB41 (ENSGEVG00005006102)	ENSGEVG00005005901	TRNAU1AP (ENSGEVG00005005844)	RAB42 (ENSGEVG00005005806)	ENSGEVG00005005767	TAF12 (ENSGEVG00005005747)	GMEB1 (ENSGEVG00005005710)	YTHDF2 (ENSGEVG00005005693)	ENSGEVG00005005669	ID3 (ENSGEVG00005005643) #18	CATSPER4 (ENSGEVG00005005464)	E2F2 (ENSGEVG00005005385) #19	ENSGEVG00005005358 #21	ENSGEVG00005005311 #22	ENSGEVG00005005264 #22	ENSGEVG00005005245	OPRD1 (ENSGEVG00005005214)	RCC1 (ENSGEVG00005005188)	PHACTR4 (ENSGEVG00005005142)	SESN2 (ENSGEVG00005005043)	ENSGEVG00005004945	ENSGEVG00005004911	ENSGEVG00005004831	ENSGEVG00005004770	ENSGEVG00005004746	FGR (ENSGEVG00005004709)	AHDC1 (ENSGEVG00005004682)	WASF2 (ENSGEVG00005004635)	GPR3 (ENSGEVG00005004575) ##10
Abingdon island giant tortoise	DUPLICATION
Abingdon island giant tortoise	MODERN SPECIES	2225	EPB41 (ENSCABG00000009190)	ENSCABG00000009529	TRNAU1AP (ENSCABG00000009603)	RAB42 (ENSCABG00000009620)	ENSCABG00000009691	TAF12 (ENSCABG00000009693)	ENSCABG00000009697	GMEB1 (ENSCABG00000009700)	YTHDF2 (ENSCABG00000009756)	ENSCABG00000009758	ID3 (ENSCABG00000009760) #18	CATSPER4 (ENSCABG00000009764)	E2F2 (ENSCABG00000009772) #19	ASAP3 (ENSCABG00000009781) #21	ENSCABG00000009791 #22	ENSCABG00000009793 #22	ENSCABG00000009795	OPRD1 (ENSCABG00000009799)	RCC1 (ENSCABG00000009802)	PHACTR4 (ENSCABG00000009807)	ENSCABG00000009809	ENSCABG00000009810	SESN2 (ENSCABG00000009813)	FAM76A (ENSCABG00000009817)	ENSCABG00000009820	IFI6 (ENSCABG00000009824)	ENSCABG00000009827	ENSCABG00000009828	ENSCABG00000009830	ENSCABG00000009835	FGR (ENSCABG00000009837)
Abingdon island giant tortoise	MODERN SPECIES	2225	TMEM200B (ENSCABG00000009170)	EPB41 (ENSCABG00000009190)	ENSCABG00000009529	TRNAU1AP (ENSCABG00000009603)	RAB42 (ENSCABG00000009620)	ENSCABG00000009691	TAF12 (ENSCABG00000009693)	ENSCABG00000009697	GMEB1 (ENSCABG00000009700)	YTHDF2 (ENSCABG00000009756)	ENSCABG00000009758	ID3 (ENSCABG00000009760) #18	CATSPER4 (ENSCABG00000009764)	E2F2 (ENSCABG00000009772) #19	ASAP3 (ENSCABG00000009781) #21	ENSCABG00000009791 #22	ENSCABG00000009793 #22	ENSCABG00000009795	OPRD1 (ENSCABG00000009799)	RCC1 (ENSCABG00000009802)	PHACTR4 (ENSCABG00000009807)	ENSCABG00000009809	ENSCABG00000009810	SESN2 (ENSCABG00000009813)	FAM76A (ENSCABG00000009817)	ENSCABG00000009820	IFI6 (ENSCABG00000009824)	ENSCABG00000009827	ENSCABG00000009828	ENSCABG00000009830	ENSCABG00000009835
Emydidae	ANCESTRAL SPECIES	8	ENSGT00940000158264.b	ENSGT00530000063698.b	ENSGT00940000157833	ENSGT00940000155019.a.a	ENSGT00940000156139.ab	ENSGT00940000162094	ENSGT00940000164873	ENSGT00390000002144	ENSGT00410000025596.a.b	ENSGT00940000156761	ENSGT00940000167209	ENSGT00940000160504 #18	ENSGT00940000161879	ENSGT00940000160992 #19	ENSGT00940000161085 #21	ENSGT00940000157034 #22	ENSGT00990000210108	ENSGT00940000157669	ENSGT00940000155543	ENSGT00940000157582	ENSGT00950000183168.B.a	ENSGT00940000160073	ENSGT00940000161215.hc.b	ENSGT00940000163178	ENSGT00940000163282.j	ENSGT00940000163923.e.c	ENSGT00940000163923.e.d	ENSGT00940000163923.f	ENSGT00940000155462	ENSGT00940000164855	ENSGT00940000156226
Three-toed box turtle	DUPLICATION
Three-toed box turtle	MODERN SPECIES	111	ENSTMTG00000011472	TRNAU1AP (ENSTMTG00000011909)	ENSTMTG00000011926	RAB42 (ENSTMTG00000011941)	ENSTMTG00000011945	TAF12 (ENSTMTG00000011959)	ENSTMTG00000011990	GMEB1 (ENSTMTG00000012025)	YTHDF2 (ENSTMTG00000012040)	ENSTMTG00000012062	ID3 (ENSTMTG00000012078) #18	CATSPER4 (ENSTMTG00000012107)	E2F2 (ENSTMTG00000012225) #19	ENSTMTG00000012260	ENSTMTG00000012313 #22	ENSTMTG00000012345 #22	ENSTMTG00000012357	OPRD1 (ENSTMTG00000012388)	RCC1 (ENSTMTG00000012408)	PHACTR4 (ENSTMTG00000012459)	SESN2 (ENSTMTG00000012540)	FAM76A (ENSTMTG00000012563)	ENSTMTG00000012595	IFI6 (ENSTMTG00000012623)	ENSTMTG00000012637	ENSTMTG00000012680	ENSTMTG00000012689	ENSTMTG00000012703	ENSTMTG00000012717	ENSTMTG00000012746	AHDC1 (ENSTMTG00000012770)
Three-toed box turtle	MODERN SPECIES	111	EPB41 (ENSTMTG00000009904)	ENSTMTG00000011472	TRNAU1AP (ENSTMTG00000011909)	ENSTMTG00000011926	RAB42 (ENSTMTG00000011941)	ENSTMTG00000011945	TAF12 (ENSTMTG00000011959)	ENSTMTG00000011990	GMEB1 (ENSTMTG00000012025)	YTHDF2 (ENSTMTG00000012040)	ENSTMTG00000012062	ID3 (ENSTMTG00000012078) #18	CATSPER4 (ENSTMTG00000012107)	E2F2 (ENSTMTG00000012225) #19	ENSTMTG00000012260	ENSTMTG00000012313 #22	ENSTMTG00000012345 #22	ENSTMTG00000012357	OPRD1 (ENSTMTG00000012388)	RCC1 (ENSTMTG00000012408)	PHACTR4 (ENSTMTG00000012459)	SESN2 (ENSTMTG00000012540)	FAM76A (ENSTMTG00000012563)	ENSTMTG00000012595	IFI6 (ENSTMTG00000012623)	ENSTMTG00000012637	ENSTMTG00000012680	ENSTMTG00000012689	ENSTMTG00000012703	ENSTMTG00000012717	ENSTMTG00000012746
painted turtle	DUPLICATION
painted turtle	DUPLICATION
painted turtle	MODERN SPECIES	713	ENSCPBG00000000181	TRNAU1AP (ENSCPBG00000000121)	RAB42 (ENSCPBG00000011245)	ENSCPBG00000011236	TAF12 (ENSCPBG00000011234)	ENSCPBG00000011226	GMEB1 (ENSCPBG00000011222)	YTHDF2 (ENSCPBG00000011221)	ENSCPBG00000011219	ID3 (ENSCPBG00000011218) #18	CATSPER4 (ENSCPBG00000011215)	E2F2 (ENSCPBG00000011214) #19	ASAP3 (ENSCPBG00000011209) #21	ENSCPBG00000011207 #22	ENSCPBG00000011206 #22	ENSCPBG00000011205 #22	ENSCPBG00000011204	ENSCPBG00000011203	ENSCPBG00000011202	OPRD1 (ENSCPBG00000011201)	RCC1 (ENSCPBG00000011198)	PHACTR4 (ENSCPBG00000011194)	SESN2 (ENSCPBG00000011193)	FAM76A (ENSCPBG00000011191)	ENSCPBG00000011190
painted turtle	MODERN SPECIES	713	ENSCPBG00000008972	ENSCPBG00000000969	ENSCPBG00000000181	TRNAU1AP (ENSCPBG00000000121)	RAB42 (ENSCPBG00000011245)	ENSCPBG00000011236	TAF12 (ENSCPBG00000011234)	ENSCPBG00000011226	GMEB1 (ENSCPBG00000011222)	YTHDF2 (ENSCPBG00000011221)	ENSCPBG00000011219	ID3 (ENSCPBG00000011218) #18	CATSPER4 (ENSCPBG00000011215)	E2F2 (ENSCPBG00000011214) #19	ASAP3 (ENSCPBG00000011209) #21	ENSCPBG00000011207 #22	ENSCPBG00000011206 #22	ENSCPBG00000011205 #22	ENSCPBG00000011204	ENSCPBG00000011203	ENSCPBG00000011202	OPRD1 (ENSCPBG00000011201)	RCC1 (ENSCPBG00000011198)	PHACTR4 (ENSCPBG00000011194)	SESN2 (ENSCPBG00000011193)	FAM76A (ENSCPBG00000011191)	ENSCPBG00000011190
painted turtle	MODERN SPECIES	713	ENSCPBG00000000969	ENSCPBG00000000181	TRNAU1AP (ENSCPBG00000000121)	RAB42 (ENSCPBG00000011245)	ENSCPBG00000011236	TAF12 (ENSCPBG00000011234)	ENSCPBG00000011226	GMEB1 (ENSCPBG00000011222)	YTHDF2 (ENSCPBG00000011221)	ENSCPBG00000011219	ID3 (ENSCPBG00000011218) #18	CATSPER4 (ENSCPBG00000011215)	E2F2 (ENSCPBG00000011214) #19	ASAP3 (ENSCPBG00000011209) #21	ENSCPBG00000011207 #22	ENSCPBG00000011206 #22	ENSCPBG00000011205 #22	ENSCPBG00000011204	ENSCPBG00000011203	ENSCPBG00000011202	OPRD1 (ENSCPBG00000011201)	RCC1 (ENSCPBG00000011198)	PHACTR4 (ENSCPBG00000011194)	SESN2 (ENSCPBG00000011193)	FAM76A (ENSCPBG00000011191)	ENSCPBG00000011190
Coelacanth	MODERN SPECIES	375	ENSLACG00000014955	SCMH1 (ENSLACG00000014533)	SLFNL1 (ENSLACG00000014475)	CTPS1 (ENSLACG00000014319)	CITED4 (ENSLACG00000013269)	ENSLACG00000012890	rab42a (ENSLACG00000012755)	rab42b (ENSLACG00000012674)	TAF12 (ENSLACG00000012470)	ENSLACG00000012084	GMEB1 (ENSLACG00000011757)	YTHDF2 (ENSLACG00000011489)	ID3 (ENSLACG00000009563) #18	E2F2 (ENSLACG00000008759) #19	asap3 (ENSLACG00000007662)	TCEA3 (ENSLACG00000006976) #22	OPRD1 (ENSLACG00000003077)