Rodentia	ANCESTRAL SPECIES		ENSGT00940000158669 #7	ENSGT00940000154450 #8	ENSGT00530000063881.a.b #9	ENSGT00990000204354 #10	ENSGT01060000248564.a.b #11	ENSGT00440000035378.c #12	ENSGT00940000158484 #13	ENSGT00940000158000 #14	ENSGT00940000156197 #15	ENSGT00490000043398 #16	ENSGT00390000002428.a.g.a #17	ENSGT00910000144211.n.a.fb #18	ENSGT00940000160504 #19	ENSGT00940000160992 #20	ENSGT00940000161085 #21	ENSGT00940000157034 #22	ENSGT00940000153587.b #23	ENSGT00940000153511.a #24	ENSGT01010000222287.B.b.a.b.a #25	ENSGT00950000182852.A.b #26	ENSGT00940000157193 #27	ENSGT00390000007769 #28	ENSGT00450000040404.a	ENSGT00940000155503 #29	ENSGT00940000161091 #30	ENSGT00940000161227 #31	ENSGT00940000162143 #32	ENSGT00940000160469	ENSGT00930000151052 #33	ENSGT00940000159654 #34	ENSGT00940000153675.a.a.a.b #35
Rodentia_A	ANCESTRAL SPECIES		ENSGT00940000158669 #7	ENSGT00940000154450 #8	ENSGT00530000063881.a.b #9	ENSGT00990000204354 #10	ENSGT01060000248564.a.b #11	ENSGT00440000035378.c #12	ENSGT00940000158484 #13	ENSGT00940000158000 #14	ENSGT00940000156197 #15	ENSGT00490000043398 #16	ENSGT00390000002428.a.g.a #17	ENSGT00910000144211.n.a.fb #18	ENSGT00940000160504 #19	ENSGT00940000160992 #20	ENSGT00940000161085 #21	ENSGT00940000157034 #22	ENSGT00940000153587.b #23	ENSGT00940000153511.a #24	ENSGT01010000222287.B.b.a.b.a #25	ENSGT00950000182852.A.b #26	ENSGT00940000157193 #27	ENSGT00390000007769 #28	ENSGT00450000040404.a	ENSGT00940000155503 #29	ENSGT00940000161091 #30	ENSGT00940000161227 #31	ENSGT00940000162143 #32	ENSGT00940000160469	ENSGT00930000151052 #33	ENSGT00940000159654 #34	ENSGT00940000153675.a.a.a.b #35
Sciuridae	ANCESTRAL SPECIES	3	ENSGT00940000158669 #7	ENSGT00940000154450 #8	ENSGT00530000063881.a.b #9	ENSGT00990000204354 #10	ENSGT01060000248564.a.b #11	ENSGT00440000035378.c #12	ENSGT00940000158484 #13	ENSGT00940000158000 #14	ENSGT00940000156197 #15	ENSGT00490000043398 #16	ENSGT00390000002428.a.g.a #17	ENSGT00910000144211.n.a.fb #18	ENSGT00940000160504 #19	ENSGT00940000160992 #20	ENSGT00940000161085 #21	ENSGT00940000157034 #22	ENSGT00940000153587.b #23	ENSGT00940000153511.a #24	ENSGT01010000222287.B.b.a.b.a #25	ENSGT00950000182852.A.b #26	ENSGT00940000157193 #27	ENSGT00390000007769 #28	ENSGT00450000040404.a	ENSGT00940000155503 #29	ENSGT00940000161091 #30	ENSGT00940000161227 #31	ENSGT00940000162143 #32	ENSGT00940000160469	ENSGT00930000151052 #33	ENSGT00940000159654 #34	ENSGT00940000153675.a.a.a.b #35
Marmotini	ANCESTRAL SPECIES		ENSGT00940000158669 #7	ENSGT00940000154450 #8	ENSGT00530000063881.a.b #9	ENSGT00990000204354 #10	ENSGT01060000248564.a.b #11	ENSGT00440000035378.c #12	ENSGT00940000158484 #13	ENSGT00940000158000 #14	ENSGT00940000156197 #15	ENSGT00490000043398 #16	ENSGT00390000002428.a.g.a #17	ENSGT00910000144211.n.a.fb #18	ENSGT00940000160504 #19	ENSGT00940000160992 #20	ENSGT00940000161085 #21	ENSGT00940000157034 #22	ENSGT00940000153587.b #23	ENSGT00940000153511.a #24	ENSGT01010000222287.B.b.a.b.a #25	ENSGT00950000182852.A.b #26	ENSGT00940000157193 #27	ENSGT00390000007769 #28	ENSGT00450000040404.a	ENSGT00940000155503 #29	ENSGT00940000161091 #30	ENSGT00940000161227 #31	ENSGT00940000162143 #32	ENSGT00940000160469	ENSGT00930000151052 #33	ENSGT00940000159654 #34	ENSGT00940000153675.a.a.a.b #35
Alpin marmot	MODERN SPECIES	15	MYOM3 (ENSMMMG00000018557) #7	SRSF10 (ENSMMMG00000018592) #8	PNRC2 (ENSMMMG00000018622) #9	ENSMMMG00000018624 #10	CNR2 (ENSMMMG00000018629) #11	FUCA1 (ENSMMMG00000018637) #12	HMGCL (ENSMMMG00000018659) #13	GALE (ENSMMMG00000018757) #14	LYPLA2 (ENSMMMG00000018761) #15	PITHD1 (ENSMMMG00000018765) #16	ELOA (ENSMMMG00000018774) #17	RPL11 (ENSMMMG00000018781) #18	ID3 (ENSMMMG00000018787) #19	E2F2 (ENSMMMG00000018795) #20	ASAP3 (ENSMMMG00000018861) #21	TCEA3 (ENSMMMG00000018885) #22	ZNF436 (ENSMMMG00000018891) #23	HNRNPR (ENSMMMG00000018898) #24	ENSMMMG00000018946 #25	LUZP1 (ENSMMMG00000018950) #26	KDM1A (ENSMMMG00000018957) #27	TEX46 (ENSMMMG00000018999) #28	EPHB2 (ENSMMMG00000019007) #29	C1QB (ENSMMMG00000019024) #30	C1QC (ENSMMMG00000019028) #31	C1QA (ENSMMMG00000019033) #32	ZBTB40 (ENSMMMG00000019071) #33	WNT4 (ENSMMMG00000019083) #34	CDC42 (ENSMMMG00000019087) #35	ENSMMMG00000019100 #36	ENSMMMG00000019118 #37
Marmotini_b	ANCESTRAL SPECIES		ENSGT00940000158669 #7	ENSGT00940000154450 #8	ENSGT00530000063881.a.b #9	ENSGT00990000204354 #10	ENSGT01060000248564.a.b #11	ENSGT00440000035378.c #12	ENSGT00940000158484 #13	ENSGT00940000158000 #14	ENSGT00940000156197 #15	ENSGT00490000043398 #16	ENSGT00390000002428.a.g.a #17	ENSGT00910000144211.n.a.fb #18	ENSGT00940000160504 #19	ENSGT00940000160992 #20	ENSGT00940000161085 #21	ENSGT00940000157034 #22	ENSGT00940000153587.b #23	ENSGT00940000153511.a #24	ENSGT01010000222287.B.b.a.b.a #25	ENSGT00950000182852.A.b #26	ENSGT00940000157193 #27	ENSGT00390000007769 #28	ENSGT00450000040404.a	ENSGT00940000155503 #29	ENSGT00940000161091 #30	ENSGT00940000161227 #31	ENSGT00940000162143 #32	ENSGT00940000160469	ENSGT00930000151052 #33	ENSGT00940000159654 #34	ENSGT00940000153675.a.a.a.b #35
Squirrel	MODERN SPECIES	74	IL22RA1 (ENSSTOG00000001510)	MYOM3 (ENSSTOG00000000934) #7	SRSF10 (ENSSTOG00000000956) #8	PNRC2 (ENSSTOG00000000953) #9	CNR2 (ENSSTOG00000011946) #11	FUCA1 (ENSSTOG00000011938) #12	HMGCL (ENSSTOG00000011933) #13	GALE (ENSSTOG00000011927) #14	LYPLA2 (ENSSTOG00000011918) #15	PITHD1 (ENSSTOG00000028000) #16	ELOA (ENSSTOG00000023412) #17	ENSSTOG00000011904	ID3 (ENSSTOG00000009584) #19	E2F2 (ENSSTOG00000009576) #20	ASAP3 (ENSSTOG00000009547) #21	TCEA3 (ENSSTOG00000021068) #22	ZNF436 (ENSSTOG00000001212) #23	HNRNPR (ENSSTOG00000021981) #24	ENSSTOG00000006804 #25	LUZP1 (ENSSTOG00000022904) #26	KDM1A (ENSSTOG00000002451) #27	LACTBL1 (ENSSTOG00000023903)	EPHB2 (ENSSTOG00000015377) #29	C1QB (ENSSTOG00000023153) #30	C1QC (ENSSTOG00000030103) #31	C1QA (ENSSTOG00000034210) #32	EPHA8 (ENSSTOG00000008929)	ZBTB40 (ENSSTOG00000009598) #33	WNT4 (ENSSTOG00000000806) #34	ENSSTOG00000000805 #35	ENSSTOG00000028853 #36
Arctic ground squirrel	MODERN SPECIES	294	MYOM3 (ENSUPAG00010021069) #7	SRSF10 (ENSUPAG00010021046) #8	PNRC2 (ENSUPAG00010021043) #9	ENSUPAG00010021041 #10	CNR2 (ENSUPAG00010021037) #11	FUCA1 (ENSUPAG00010021031) #12	HMGCL (ENSUPAG00010021020) #13	GALE (ENSUPAG00010021009) #14	LYPLA2 (ENSUPAG00010021003) #15	PITHD1 (ENSUPAG00010020991) #16	ELOA (ENSUPAG00010020981) #17	RPL11 (ENSUPAG00010020974) #18	ID3 (ENSUPAG00010020971) #19	E2F2 (ENSUPAG00010020963) #20	ASAP3 (ENSUPAG00010020955) #21	TCEA3 (ENSUPAG00010020944) #22	ZNF436 (ENSUPAG00010020939) #23	HNRNPR (ENSUPAG00010020927) #24	ENSUPAG00010020922 #25	LUZP1 (ENSUPAG00010020907) #26	KDM1A (ENSUPAG00010020880) #27	TEX46 (ENSUPAG00010020875) #28	LACTBL1 (ENSUPAG00010020863)	EPHB2 (ENSUPAG00010020830) #29	C1QB (ENSUPAG00010020826) #30	C1QC (ENSUPAG00010020824) #31	C1QA (ENSUPAG00010020820) #32	EPHA8 (ENSUPAG00010020808)	ZBTB40 (ENSUPAG00010020801) #33	WNT4 (ENSUPAG00010020796) #34	ENSUPAG00010020784 #35
Eurasian red squirrel	MODERN SPECIES		SRSF10 (ENSSVLG00005000670) #8	PNRC2 (ENSSVLG00005000620) #9	ENSSVLG00005000604	CNR2 (ENSSVLG00005000589) #11	FUCA1 (ENSSVLG00005000561) #12	HMGCL (ENSSVLG00005000529) #13	GALE (ENSSVLG00005000509) #14	LYPLA2 (ENSSVLG00005000457) #15	PITHD1 (ENSSVLG00005000416) #16	ELOA (ENSSVLG00005000381) #17	RPL11 (ENSSVLG00005000344) #18	ID3 (ENSSVLG00005000320) #19	E2F2 (ENSSVLG00005000151) #20	ENSSVLG00005000104	ASAP3 (ENSSVLG00005006849) #21	TCEA3 (ENSSVLG00005006814) #22	ZNF436 (ENSSVLG00005006783) #23	HNRNPR (ENSSVLG00005006684) #24	HTR1D (ENSSVLG00005006648)	LUZP1 (ENSSVLG00005006625) #26	KDM1A (ENSSVLG00005006528) #27	TEX46 (ENSSVLG00005006473) #28	LACTBL1 (ENSSVLG00005006410)	EPHB2 (ENSSVLG00005006141) #29	C1QB (ENSSVLG00005006095) #30	C1QC (ENSSVLG00005006074) #31	C1QA (ENSSVLG00005006048) #32	EPHA8 (ENSSVLG00005005942)	ZBTB40 (ENSSVLG00005005776) #33	WNT4 (ENSSVLG00005005714) #34	ENSSVLG00005005628 #35
Hystricomorpha	DUPLICATION
Hystricomorpha	ANCESTRAL SPECIES	4	ENSGT00940000161366	ENSGT00940000158669 #7	ENSGT00940000154450.lc #8	ENSGT00530000063881.a.b #9	ENSGT01060000248564.a.b #11	ENSGT00440000035378.c #12	ENSGT00940000158484 #13	ENSGT00940000158000 #14	ENSGT00940000156197 #15	ENSGT00490000043398 #16	ENSGT00390000002428.a.g.a #17	ENSGT00910000144211.n.a.fb #18	ENSGT00940000160504 #19	ENSGT00940000160992 #20	ENSGT00940000161085 #21	ENSGT00940000157034.fb #22	ENSGT00940000153587.b #23	ENSGT00940000153511.a #24	ENSGT01010000222287.B.b.a.b.a #25	ENSGT00950000182852.A.b #26	ENSGT00940000157193 #27	ENSGT00390000007769 #28	ENSGT00450000040404.a	ENSGT00940000155503 #29	ENSGT00940000161091 #30	ENSGT00940000161227 #31	ENSGT00940000162143 #32	ENSGT00940000160469	ENSGT00930000151052 #33	ENSGT00940000159654 #34	ENSGT00940000153675.a.a.b.e.a ##35
Naked mole-rat female	MODERN SPECIES	26	ENSHGLG00000033166	SRSF10 (ENSHGLG00000046721) #8	PNRC2 (ENSHGLG00000044854) #9	CNR2 (ENSHGLG00000042644) #11	FUCA1 (ENSHGLG00000011473) #12	HMGCL (ENSHGLG00000015186) #13	GALE (ENSHGLG00000014688) #14	LYPLA2 (ENSHGLG00000011699) #15	PITHD1 (ENSHGLG00000011193) #16	ELOA (ENSHGLG00000010726) #17	ENSHGLG00000048939	RPL11 (ENSHGLG00000046193) #18	ID3 (ENSHGLG00000015126) #19	E2F2 (ENSHGLG00000013011) #20	ASAP3 (ENSHGLG00000011692) #21	TCEA3 (ENSHGLG00000010028) #22	ZNF436 (ENSHGLG00000047527) #23	HNRNPR (ENSHGLG00000013025) #24	ENSHGLG00000035069	ENSHGLG00000049799 #25	LUZP1 (ENSHGLG00000009891) #26	ENSHGLG00000032038	KDM1A (ENSHGLG00000014570) #27	TEX46 (ENSHGLG00000047177) #28	LACTBL1 (ENSHGLG00000018161)	EPHB2 (ENSHGLG00000018029) #29	C1QB (ENSHGLG00000016977) #30	C1QC (ENSHGLG00000013065) #31	C1QA (ENSHGLG00000011009) #32	EPHA8 (ENSHGLG00000009876)	ZBTB40 (ENSHGLG00000016950) #33
Hystricomorpha_a	ANCESTRAL SPECIES	1	ENSGT00940000161366	ENSGT00940000158669 #7	ENSGT00940000154450.lc #8	ENSGT00530000063881.a.b #9	ENSGT01060000248564.a.b #11	ENSGT00440000035378.c #12	ENSGT00940000158484 #13	ENSGT00940000158000 #14	ENSGT00940000156197 #15	ENSGT00490000043398 #16	ENSGT00390000002428.a.g.a #17	ENSGT00910000144211.n.a.fb #18	ENSGT00940000160504 #19	ENSGT00940000160992 #20	ENSGT00940000161085 #21	ENSGT00940000157034.fb #22	ENSGT00940000153587.b #23	ENSGT00950000182890.B.b.j	ENSGT00940000153511.a #24	ENSGT01010000222287.B.b.a.b.a #25	ENSGT00950000182852.A.b #26	ENSGT00940000157193 #27	ENSGT00390000007769 #28	ENSGT00450000040404.a	ENSGT00940000155503 #29	ENSGT00940000161091 #30	ENSGT00940000161227 #31	ENSGT00940000162143 #32	ENSGT00940000160469	ENSGT00930000151052 #33	ENSGT00940000159654 #34
Guinea pig	MODERN SPECIES	25	IL22RA1 (ENSCPOG00000024764)	MYOM3 (ENSCPOG00000008018) #7	SRSF10 (ENSCPOG00000034102) #8	PNRC2 (ENSCPOG00000037509) #9	CNR2 (ENSCPOG00000003537) #11	FUCA1 (ENSCPOG00000003535) #12	HMGCL (ENSCPOG00000008645) #13	GALE (ENSCPOG00000031845) #14	LYPLA2 (ENSCPOG00000033750) #15	PITHD1 (ENSCPOG00000008637) #16	ELOA (ENSCPOG00000008632) #17	RPL11 (ENSCPOG00000008432) #18	ID3 (ENSCPOG00000038307) #19	E2F2 (ENSCPOG00000008746) #20	ASAP3 (ENSCPOG00000023338) #21	ENSCPOG00000000504 #22	ENSCPOG00000030412	HNRNPR (ENSCPOG00000040556) #24	ENSCPOG00000032945 #25	LUZP1 (ENSCPOG00000010753) #26	KDM1A (ENSCPOG00000010744) #27	LACTBL1 (ENSCPOG00000022624)	EPHB2 (ENSCPOG00000010844) #29	C1QB (ENSCPOG00000008124) #30	C1QC (ENSCPOG00000031590) #31	C1QA (ENSCPOG00000030985) #32	EPHA8 (ENSCPOG00000021134)	ZBTB40 (ENSCPOG00000012844) #33	WNT4 (ENSCPOG00000040292) #34	CDC42 (ENSCPOG00000006543) ##35	ENSCPOG00000030052 #36
Hystricomorpha_b	ANCESTRAL SPECIES	7	ENSGT00940000161366	ENSGT00940000158669 #7	ENSGT00940000154450.lc #8	ENSGT00530000063881.a.b #9	ENSGT01060000248564.a.b #11	ENSGT00440000035378.c #12	ENSGT00940000158484 #13	ENSGT00940000158000 #14	ENSGT00940000156197 #15	ENSGT00490000043398 #16	ENSGT00390000002428.a.g.a #17	ENSGT00910000144211.n.a.fb #18	ENSGT00940000160504 #19	ENSGT00940000160992 #20	ENSGT00940000161085 #21	ENSGT00940000157034.fb #22	ENSGT00940000153587.b #23	ENSGT00950000182890.B.b.j	ENSGT00940000153511.a #24	ENSGT01010000222287.B.b.a.b.a #25	ENSGT00950000182852.A.b #26	ENSGT00940000157193 #27	ENSGT00390000007769 #28	ENSGT00450000040404.a	ENSGT00940000155503 #29	ENSGT00940000161091 #30	ENSGT00940000161227 #31	ENSGT00940000162143 #32	ENSGT00940000160469	ENSGT00930000151052 #33	ENSGT00940000159654 #34
Long-tailed chinchilla	MODERN SPECIES	159	IL22RA1 (ENSCLAG00000014220)	MYOM3 (ENSCLAG00000014590) #7	ENSCLAG00000015555 #8	ENSCLAG00000014105 #9	CNR2 (ENSCLAG00000014048) #11	FUCA1 (ENSCLAG00000013057) #12	HMGCL (ENSCLAG00000013961) #13	GALE (ENSCLAG00000011611) #14	LYPLA2 (ENSCLAG00000010904) #15	PITHD1 (ENSCLAG00000010044) #16	ELOA (ENSCLAG00000009140) #17	Rpl11 (ENSCLAG00000012453) #18	ID3 (ENSCLAG00000011715) #19	E2F2 (ENSCLAG00000013943) #20	ASAP3 (ENSCLAG00000009066) #21	ENSCLAG00000013324 #22	ENSCLAG00000013386	HNRNPR (ENSCLAG00000012738) #24	ENSCLAG00000012687 #25	LUZP1 (ENSCLAG00000008774) #26	KDM1A (ENSCLAG00000007181) #27	TEX46 (ENSCLAG00000014987) #28	LACTBL1 (ENSCLAG00000009588)	EPHB2 (ENSCLAG00000011252) #29	C1QB (ENSCLAG00000011016) #30	C1QC (ENSCLAG00000009600) #31	C1QA (ENSCLAG00000009255) #32	EPHA8 (ENSCLAG00000014518)	ENSCLAG00000011831	ZBTB40 (ENSCLAG00000015032) #33	WNT4 (ENSCLAG00000010626) #34
Degu	MODERN SPECIES	133	IL22RA1 (ENSODEG00000015339)	MYOM3 (ENSODEG00000014259) #7	ENSODEG00000020207	CNR2 (ENSODEG00000014788) #11	FUCA1 (ENSODEG00000013698) #12	HMGCL (ENSODEG00000014361) #13	GALE (ENSODEG00000015082) #14	ENSODEG00000014635 #15	PITHD1 (ENSODEG00000015391) #16	ENSODEG00000014473 #17	ENSODEG00000014098	RPL11 (ENSODEG00000014876) #18	ID3 (ENSODEG00000014895) #19	E2F2 (ENSODEG00000014064) #20	ASAP3 (ENSODEG00000013894) #21	ENSODEG00000014378 #22	ZNF436 (ENSODEG00000014873) #23	ENSODEG00000015161	ENSODEG00000020184 #25	ENSODEG00000020101	LUZP1 (ENSODEG00000014336) #26	KDM1A (ENSODEG00000014755) #27	ENSODEG00000014466	ENSODEG00000014173 #28	LACTBL1 (ENSODEG00000014475)	EPHB2 (ENSODEG00000015223) #29	ENSODEG00000020286	C1QB (ENSODEG00000015143) #30	C1QC (ENSODEG00000015249) #31	C1QA (ENSODEG00000016110) #32	EPHA8 (ENSODEG00000014623)
Hystricomorpha	ANCESTRAL SPECIES	25	ENSGT00390000016050	ENSGT00940000154956	ENSGT00940000154934.B	ENSGT01050000244827.C.c.a.b	ENSGT00550000075006	ENSGT00950000183061.a.a.b	ENSGT00940000157614.f	ENSGT00940000157257	ENSGT00940000161440	ENSGT00940000161564	ENSGT00390000003602	ENSGT00390000012305.b	ENSGT00610000086058.b	ENSGT00940000158948.b	ENSGT00940000155499	ENSGT00940000157034.gb #22	ENSGT00940000159635	ENSGT00940000162967	ENSGT00390000009484	ENSGT00390000018451	ENSGT00940000158706	ENSGT00390000002316	ENSGT00950000183120.e.b.a.a.a.n	ENSGT00940000156630	ENSGT00390000004952.b	ENSGT00940000155349	ENSGT00950000183026.B	ENSGT00950000183096.a.a.c.b	ENSGT00390000010734.j.p	ENSGT00940000158713	ENSGT00940000164144
Hystricomorpha_a	ANCESTRAL SPECIES	21	ENSGT00390000016050	ENSGT00940000154956	ENSGT00940000154934.B	ENSGT01050000244827.C.c.a.b	ENSGT00550000075006	ENSGT00950000183061.a.a.b	ENSGT00940000157614.f	ENSGT00940000157257	ENSGT00940000161440	ENSGT00940000161564	ENSGT00390000003602	ENSGT00390000012305.b	ENSGT00610000086058.b	ENSGT00940000158948.b	ENSGT00940000155499	ENSGT00940000157034.gb #22	ENSGT00940000159635	ENSGT00940000162967	ENSGT00390000009484	ENSGT00390000018451	ENSGT00940000158706	ENSGT00390000002316	ENSGT00950000183120.e.b.a.a.a.n	ENSGT00940000156630	ENSGT00390000004952.b	ENSGT00940000155349	ENSGT00950000183026.B	ENSGT00950000183096.a.a.c.b	ENSGT00390000010734.j.p	ENSGT00940000158713	ENSGT00940000164144
Guinea pig	MODERN SPECIES	6	SPART (ENSCPOG00000000296)	CCDC169 (ENSCPOG00000037354)	ENSCPOG00000033603	DCLK1 (ENSCPOG00000005030)	NBEA (ENSCPOG00000004513)	RFC3 (ENSCPOG00000008739)	STARD13 (ENSCPOG00000005976)	KL (ENSCPOG00000002058)	PDS5B (ENSCPOG00000033286)	ENSCPOG00000038887	N4BP2L1 (ENSCPOG00000003366)	BRCA2 (ENSCPOG00000005153)	FRY (ENSCPOG00000003917)	RXFP2 (ENSCPOG00000009157)	B3GLCT (ENSCPOG00000007455)	ENSCPOG00000035490 #22	ENSCPOG00000007441	MEDAG (ENSCPOG00000003921)	ALOX5AP (ENSCPOG00000032690)	USPL1 (ENSCPOG00000009937)	HMGB1 (ENSCPOG00000031835)	KATNAL1 (ENSCPOG00000000804)	UBL3 (ENSCPOG00000036242)	SLC7A1 (ENSCPOG00000005590)	ENSCPOG00000005581	SLC46A3 (ENSCPOG00000015460)	POMP (ENSCPOG00000001710)	FLT1 (ENSCPOG00000013357)	PAN3 (ENSCPOG00000013349)	FLT3 (ENSCPOG00000007285)	CDX2 (ENSCPOG00000007276)
Hystricomorpha_b	ANCESTRAL SPECIES	48	ENSGT00390000016050	ENSGT00940000154956	ENSGT00940000154934.B	ENSGT01050000244827.C.c.a.b	ENSGT00550000075006	ENSGT00950000183061.a.a.b	ENSGT00940000157614.f	ENSGT00940000157257	ENSGT00940000161440	ENSGT00940000161564	ENSGT00390000003602	ENSGT00390000012305.b	ENSGT00610000086058.b	ENSGT00940000158948.b	ENSGT00940000155499	ENSGT00940000157034.gb #22	ENSGT00940000159635	ENSGT00940000162967	ENSGT00390000009484	ENSGT00390000018451	ENSGT00940000158706	ENSGT00390000002316	ENSGT00950000183120.e.b.a.a.a.n	ENSGT00940000156630	ENSGT00390000004952.b	ENSGT00940000155349	ENSGT00950000183026.B	ENSGT00950000183096.a.a.c.b	ENSGT00390000010734.j.p	ENSGT00940000158713	ENSGT00940000164144
Degu	MODERN SPECIES	79	MCM5 (ENSODEG00000005912)	ENSODEG00000007112	STARD13 (ENSODEG00000006691)	KL (ENSODEG00000006590)	ENSODEG00000019263	PDS5B (ENSODEG00000006819)	ENSODEG00000006412	N4BP2L2 (ENSODEG00000006521)	ENSODEG00000005727	ENSODEG00000009214	ENSODEG00000007088	ZAR1L (ENSODEG00000005981)	FRY (ENSODEG00000006572)	RXFP2 (ENSODEG00000008146)	B3GLCT (ENSODEG00000005559)	ENSODEG00000019264 #22	HSPH1 (ENSODEG00000005577)	ENSODEG00000006248	MEDAG (ENSODEG00000005967)	ALOX5AP (ENSODEG00000005645)	USPL1 (ENSODEG00000007176)	ENSODEG00000006120	KATNAL1 (ENSODEG00000005926)	UBL3 (ENSODEG00000005571)	ENSODEG00000005438	SLC7A1 (ENSODEG00000005306)	ENSODEG00000005871	ENSODEG00000006635	SLC46A3 (ENSODEG00000006238)	ENSODEG00000005569	ENSODEG00000005111
Long-tailed chinchilla	MODERN SPECIES	138	DCLK1 (ENSCLAG00000006827)	NBEA (ENSCLAG00000005089)	MAB21L1 (ENSCLAG00000017521)	ENSCLAG00000003179	RFC3 (ENSCLAG00000003664)	STARD13 (ENSCLAG00000003814)	KL (ENSCLAG00000004704)	PDS5B (ENSCLAG00000003381)	ENSCLAG00000004607	N4BP2L1 (ENSCLAG00000004721)	BRCA2 (ENSCLAG00000005830)	ZAR1L (ENSCLAG00000004947)	FRY (ENSCLAG00000005912)	RXFP2 (ENSCLAG00000005864)	B3GLCT (ENSCLAG00000003709)	ENSCLAG00000017567 #22	HSPH1 (ENSCLAG00000004472)	ENSCLAG00000004125	TEX26 (ENSCLAG00000005302)	MEDAG (ENSCLAG00000005352)	ALOX5AP (ENSCLAG00000005620)	USPL1 (ENSCLAG00000003130)	HMGB1 (ENSCLAG00000003343)	KATNAL1 (ENSCLAG00000003501)	UBL3 (ENSCLAG00000003772)	SLC7A1 (ENSCLAG00000004045)	ENSCLAG00000004626	GPAM (ENSCLAG00000012305)	TECTB (ENSCLAG00000014020)	ENSCLAG00000003782	ACSL5 (ENSCLAG00000005097)
Naked mole-rat female	DUPLICATION
Naked mole-rat female	MODERN SPECIES	2	PDS5B (ENSHGLG00000006670)	ENSHGLG00000018160	ENSHGLG00000039341	N4BP2L1 (ENSHGLG00000006971)	BRCA2 (ENSHGLG00000008590)	ZAR1L (ENSHGLG00000006253)	ENSHGLG00000041019	ENSHGLG00000009415	ENSHGLG00000036768	ENSHGLG00000009276	ENSHGLG00000002160	ENSHGLG00000006352	ENSHGLG00000018220	ENSHGLG00000047678	ENSHGLG00000013471	ENSHGLG00000039932 #22	HSPH1 (ENSHGLG00000006908)	TEX26 (ENSHGLG00000018916)	MEDAG (ENSHGLG00000037818)	ALOX5AP (ENSHGLG00000013689)	USPL1 (ENSHGLG00000036213)	ENSHGLG00000003352	KATNAL1 (ENSHGLG00000003538)	UBL3 (ENSHGLG00000040587)	ENSHGLG00000033244	ENSHGLG00000019220	ENSHGLG00000013589	ENSHGLG00000012383	ENSHGLG00000039882	SLC46A3 (ENSHGLG00000007999)	ENSHGLG00000008991
Naked mole-rat female	MODERN SPECIES	24	ENSHGLG00000032876	ENSHGLG00000045251	PRCP (ENSHGLG00000036425)	ENSHGLG00000046609	DDIAS (ENSHGLG00000050869)	ENSHGLG00000002759	PCF11 (ENSHGLG00000002473)	ENSHGLG00000002410	ANKRD42 (ENSHGLG00000007952)	ENSHGLG00000014010	ENSHGLG00000043756	ENSHGLG00000046380	ENSHGLG00000042096	DLG2 (ENSHGLG00000004449)	ENSHGLG00000037235	ENSHGLG00000003500 #22	ENSHGLG00000003233	CREBZF (ENSHGLG00000003083)	CCDC89 (ENSHGLG00000037872)	ENSHGLG00000002340	CCDC83 (ENSHGLG00000036065)	PICALM (ENSHGLG00000001052)	ENSHGLG00000001667	EED (ENSHGLG00000001511)	ENSHGLG00000041908	CCDC81 (ENSHGLG00000001095)	ENSHGLG00000038302	ENSHGLG00000001103	ME3 (ENSHGLG00000001044)	ENSHGLG00000000902	PRSS23 (ENSHGLG00000047569)
Rodentia_B	ANCESTRAL SPECIES		ENSGT00940000158669 #7	ENSGT00940000154450 #8	ENSGT00530000063881.a.b #9	ENSGT00990000204354 #10	ENSGT01060000248564.a.b #11	ENSGT00440000035378.c #12	ENSGT00940000158484 #13	ENSGT00940000158000 #14	ENSGT00940000156197 #15	ENSGT00490000043398 #16	ENSGT00390000002428.a.g.a #17	ENSGT00910000144211.n.a.fb #18	ENSGT00940000160504 #19	ENSGT00940000160992 #20	ENSGT00940000161085 #21	ENSGT00940000157034 #22	ENSGT00940000153587.b #23	ENSGT00940000153511.a #24	ENSGT01010000222287.B.b.a.b.a #25	ENSGT00950000182852.A.b #26	ENSGT00940000157193 #27	ENSGT00390000007769 #28	ENSGT00450000040404.a	ENSGT00940000155503 #29	ENSGT00940000161091 #30	ENSGT00940000161227 #31	ENSGT00940000162143 #32	ENSGT00940000160469	ENSGT00930000151052 #33	ENSGT00940000159654 #34	ENSGT00940000153675.a.a.a.b #35
Myomorpha	ANCESTRAL SPECIES	3	ENSGT00940000158669 #7	ENSGT00940000154450 #8	ENSGT00530000063881.a.b #9	ENSGT00990000204354 #10	ENSGT01060000248564.a.b #11	ENSGT00440000035378.c #12	ENSGT00940000158484 #13	ENSGT00940000158000 #14	ENSGT00940000156197 #15	ENSGT00490000043398 #16	ENSGT00390000002428.a.g.a #17	ENSGT00910000144211.n.a.fb #18	ENSGT00940000160504 #19	ENSGT00940000160992 #20	ENSGT00940000161085 #21	ENSGT00940000157034 #22	ENSGT00940000153587.b #23	ENSGT00940000153511.a #24	ENSGT01010000222287.B.b.a.b.a #25	ENSGT00950000182852.A.b #26	ENSGT00940000157193 #27	ENSGT00390000007769 #28	ENSGT00450000040404.a	ENSGT00940000155503 #29	ENSGT00940000161091 #30	ENSGT00940000161227 #31	ENSGT00940000162143 #32	ENSGT00940000160469	ENSGT00930000151052 #33	ENSGT00940000159654 #34	ENSGT00940000153675.a.a.a.b #35
Muroidea	ANCESTRAL SPECIES	3	ENSGT00940000158669 #7	ENSGT00940000154450 #8	ENSGT00530000063881.a.b #9	ENSGT00990000204354 #10	ENSGT01060000248564.a.b #11	ENSGT00440000035378.c #12	ENSGT00940000158484 #13	ENSGT00940000158000 #14	ENSGT00940000156197 #15	ENSGT00490000043398 #16	ENSGT00390000002428.a.g.a #17	ENSGT00910000144211.n.a.fb #18	ENSGT00940000160504 #19	ENSGT00940000160992 #20	ENSGT00940000161085 #21	ENSGT00940000157034 #22	ENSGT00940000153587.b #23	ENSGT00940000153511.a #24	ENSGT01010000222287.B.b.a.b.a #25	ENSGT00950000182852.A.b #26	ENSGT00940000157193 #27	ENSGT00390000007769 #28	ENSGT00450000040404.a	ENSGT00940000155503 #29	ENSGT00940000161091 #30	ENSGT00940000161227 #31	ENSGT00940000162143 #32	ENSGT00940000160469	ENSGT00930000151052 #33	ENSGT00940000159654 #34	ENSGT00940000153675.a.a.a.b #35
Muroidea_A	ANCESTRAL SPECIES	3	ENSGT00940000158669 #7	ENSGT00940000154450 #8	ENSGT00530000063881.a.b #9	ENSGT00990000204354 #10	ENSGT01060000248564.a.b #11	ENSGT00440000035378.c #12	ENSGT00940000158484 #13	ENSGT00940000158000 #14	ENSGT00940000156197 #15	ENSGT00490000043398 #16	ENSGT00390000002428.a.g.a #17	ENSGT00910000144211.n.a.fb #18	ENSGT00940000160504 #19	ENSGT00940000160992 #20	ENSGT00940000161085 #21	ENSGT00940000157034 #22	ENSGT00940000153587.b #23	ENSGT00940000153511.a #24	ENSGT01010000222287.B.b.a.b.a #25	ENSGT00860000135869	ENSGT00950000182852.A.b #26	ENSGT00940000157193 #27	ENSGT00390000007769 #28	ENSGT00450000040404.a	ENSGT00940000155503 #29	ENSGT00940000161091 #30	ENSGT00940000161227 #31	ENSGT00940000162143 #32	ENSGT00940000160469	ENSGT00930000151052 #33	ENSGT00940000159654 #34
Cricetidae	ANCESTRAL SPECIES	2	ENSGT00940000158669 #7	ENSGT00940000154450 #8	ENSGT00530000063881.a.b #9	ENSGT00990000204354 #10	ENSGT01060000248564.a.b #11	ENSGT00440000035378.c #12	ENSGT00940000158484 #13	ENSGT00940000158000 #14	ENSGT00940000156197 #15	ENSGT00490000043398 #16	ENSGT00390000002428.a.g.a #17	ENSGT00910000144211.n.a.fb #18	ENSGT00940000160504 #19	ENSGT00940000160992 #20	ENSGT00940000161085 #21	ENSGT00940000157034 #22	ENSGT00940000153587.b #23	ENSGT00940000153511.a #24	ENSGT01010000222287.B.b.a.b.a #25	ENSGT00860000135869	ENSGT00950000182852.A.b #26	ENSGT00940000157193 #27	ENSGT00390000007769 #28	ENSGT00450000040404.a	ENSGT00940000155503 #29	ENSGT00940000161091 #30	ENSGT00940000161227 #31	ENSGT00940000162143 #32	ENSGT00940000160469	ENSGT00930000151052 #33	ENSGT00940000159654 #34
Cricetinae	ANCESTRAL SPECIES	5	ENSGT00940000161366	ENSGT00940000158669 #7	ENSGT00940000154450 #8	ENSGT00530000063881.a.b #9	ENSGT00990000204354 #10	ENSGT01060000248564.a.b #11	ENSGT00440000035378.c #12	ENSGT00940000158484 #13	ENSGT00940000158000 #14	ENSGT00940000156197 #15	ENSGT00490000043398 #16	ENSGT00390000002428.a.g.a #17	ENSGT00940000160504 #19	ENSGT00940000160992 #20	ENSGT00940000161085 #21	ENSGT00940000157034 #22	ENSGT00940000153587.b #23	ENSGT00940000153511.a #24	ENSGT01010000222287.B.b.a.b.a #25	ENSGT00860000135869	ENSGT00950000182852.A.b #26	ENSGT00940000157193 #27	ENSGT00390000007769 #28	ENSGT00450000040404.a	ENSGT00940000155503 #29	ENSGT00940000161091 #30	ENSGT00940000161227 #31	ENSGT00940000162143 #32	ENSGT00940000160469	ENSGT00930000151052 #33	ENSGT00940000159654 #34
Chinese hamster chok1gshd	MODERN SPECIES	111	Il22ra1 (ENSCGRG00001016910)	Myom3 (ENSCGRG00001025061) #7	Srsf10 (ENSCGRG00001017946) #8	Pnrc2 (ENSCGRG00001012333) #9	ENSCGRG00001014818 #10	Cnr2 (ENSCGRG00001001683) #11	Fuca1 (ENSCGRG00001023492) #12	Hmgcl (ENSCGRG00001008106) #13	Gale (ENSCGRG00001004708) #14	Lypla2 (ENSCGRG00001024962) #15	Pithd1 (ENSCGRG00001010831) #16	Eloa (ENSCGRG00001020647) #17	Id3 (ENSCGRG00001024231) #19	E2f2 (ENSCGRG00001023971) #20	Asap3 (ENSCGRG00001015362) #21	Tcea3 (ENSCGRG00001016370) #22	Zfp46 (ENSCGRG00001014194) #23	Hnrnpr (ENSCGRG00001012007) #24	Htr1d (ENSCGRG00001001066) #25	ENSCGRG00001015666	Luzp1 (ENSCGRG00001015729) #26	Kdm1a (ENSCGRG00001017159) #27	Tex46 (ENSCGRG00001023627) #28	Lactbl1 (ENSCGRG00001010932)	Ephb2 (ENSCGRG00001024803) #29	C1qb (ENSCGRG00001005823) #30	C1qc (ENSCGRG00001004076) #31	C1qa (ENSCGRG00001024982) #32	Epha8 (ENSCGRG00001024240)	Zbtb40 (ENSCGRG00001016016) #33	Wnt4 (ENSCGRG00001013957) #34
Golden Hamster	MODERN SPECIES	726									ENSMAUG00000009505 #16	ENSMAUG00000015589 ##18	ENSMAUG00000010786	Id3 (ENSMAUG00000020929) #19	E2f2 (ENSMAUG00000004295) #20	ENSMAUG00000005430	Asap3 (ENSMAUG00000011596) #21	Tcea3 (ENSMAUG00000018619) #22	Zfp46 (ENSMAUG00000015853) #23	Hnrnpr (ENSMAUG00000013503) #24	Htr1d (ENSMAUG00000015812) #25	ENSMAUG00000003424	Luzp1 (ENSMAUG00000011708) #26	Kdm1a (ENSMAUG00000018795) #27	Tex46 (ENSMAUG00000013680) #28	Lactbl1 (ENSMAUG00000013696)	Ephb2 (ENSMAUG00000010555) #29	C1qb (ENSMAUG00000016429) #30	C1qc (ENSMAUG00000010986) #31	C1qa (ENSMAUG00000012996) #32	Epha8 (ENSMAUG00000021011)	Zbtb40 (ENSMAUG00000010466) #33	Wnt4 (ENSMAUG00000011257) #34
Cricetidae_B	ANCESTRAL SPECIES	2	ENSGT00940000158669 #7	ENSGT00940000154450 #8	ENSGT00530000063881.a.b #9	ENSGT00990000204354 #10	ENSGT01060000248564.a.b #11	ENSGT00440000035378.c #12	ENSGT00940000158484 #13	ENSGT00940000158000 #14	ENSGT00940000156197 #15	ENSGT00490000043398 #16	ENSGT00390000002428.a.g.a #17	ENSGT00910000144211.n.a.fb #18	ENSGT00940000160504 #19	ENSGT00940000160992 #20	ENSGT00940000161085 #21	ENSGT00940000157034 #22	ENSGT00940000153587.b #23	ENSGT00940000153511.a #24	ENSGT01010000222287.B.b.a.b.a #25	ENSGT00860000135869	ENSGT00940000163614	ENSGT00950000182852.A.b #26	ENSGT00940000157193 #27	ENSGT00390000007769 #28	ENSGT00450000040404.a	ENSGT00940000155503 #29	ENSGT00940000161091 #30	ENSGT00940000161227 #31	ENSGT00940000162143 #32	ENSGT00940000160469	ENSGT00930000151052 #33
Northern American deer mouse	MODERN SPECIES	11	ENSPEMG00000018087	Srsf10 (ENSPEMG00000025144) #8	Pnrc2 (ENSPEMG00000029931) #9	ENSPEMG00000026104 #10	Cnr2 (ENSPEMG00000029166) #11	Fuca1 (ENSPEMG00000012408) #12	Hmgcl (ENSPEMG00000012287) #13	Gale (ENSPEMG00000012930) #14	Lypla2 (ENSPEMG00000009264) #15	Pithd1 (ENSPEMG00000008471) #16	Eloa (ENSPEMG00000010939) #17	Rpl11 (ENSPEMG00000009906) #18	Id3 (ENSPEMG00000018065) #19	E2f2 (ENSPEMG00000017187) #20	Asap3 (ENSPEMG00000010854) #21	Tcea3 (ENSPEMG00000005770) #22	Zfp46 (ENSPEMG00000028479) #23	ENSPEMG00000005942	Hnrnpr (ENSPEMG00000001783) #24	ENSPEMG00000027229	Htr1d (ENSPEMG00000025951) #25	ENSPEMG00000030264	Luzp1 (ENSPEMG00000019107) #26	Kdm1a (ENSPEMG00000019071) #27	Tex46 (ENSPEMG00000006030) #28	Lactbl1 (ENSPEMG00000015668)	Ephb2 (ENSPEMG00000014712) #29	C1qb (ENSPEMG00000013227) #30	C1qc (ENSPEMG00000029124) #31	C1qa (ENSPEMG00000015448) #32	Epha8 (ENSPEMG00000012548)
Prairie vole	MODERN SPECIES	1	Grhl3 (ENSMOCG00000001299)	Myom3 (ENSMOCG00000020835) #7	Srsf10 (ENSMOCG00000013656) #8	Pnrc2 (ENSMOCG00000004737) #9	Cnr2 (ENSMOCG00000007690) #11	Fuca1 (ENSMOCG00000018859) #12	Hmgcl (ENSMOCG00000010721) #13	Gale (ENSMOCG00000021243) #14	ENSMOCG00000010122 #15	Pithd1 (ENSMOCG00000015587) #16	Eloa (ENSMOCG00000002082) #17	Rpl11 (ENSMOCG00000021255) #18	Id3 (ENSMOCG00000019889) #19	E2f2 (ENSMOCG00000018023) #20	Asap3 (ENSMOCG00000005373) #21	Tcea3 (ENSMOCG00000020931) #22	Zfp46 (ENSMOCG00000018332) #23	Hnrnpr (ENSMOCG00000013434) #24	ENSMOCG00000004611	ENSMOCG00000004277	Luzp1 (ENSMOCG00000008505) #26	Kdm1a (ENSMOCG00000019521) #27	Lactbl1 (ENSMOCG00000017701)	Ephb2 (ENSMOCG00000011093) #29	C1qb (ENSMOCG00000007179) #30	C1qc (ENSMOCG00000008224) #31	C1qa (ENSMOCG00000006901) #32	Epha8 (ENSMOCG00000021776)	Zbtb40 (ENSMOCG00000013259) #33	Wnt4 (ENSMOCG00000016876) #34	Cdc42 (ENSMOCG00000014890) #35
Murinae	ANCESTRAL SPECIES	2	ENSGT00940000158669 #7	ENSGT00940000154450 #8	ENSGT00530000063881.a.b #9	ENSGT00990000204354 #10	ENSGT01060000248564.a.b #11	ENSGT00440000035378.c #12	ENSGT00940000158484 #13	ENSGT00940000158000 #14	ENSGT00940000156197 #15	ENSGT00490000043398 #16	ENSGT00390000002428.a.g.a #17	ENSGT00910000144211.n.a.fb #18	ENSGT00940000160504 #19	ENSGT00940000160992 #20	ENSGT00940000161085 #21	ENSGT00940000157034 #22	ENSGT00940000153587.b #23	ENSGT00940000153511.a #24	ENSGT01010000222287.B.b.a.b.a #25	ENSGT00860000135869	ENSGT00950000182852.A.b #26	ENSGT00940000157193 #27	ENSGT00390000007769 #28	ENSGT00450000040404.a	ENSGT00940000155503 #29	ENSGT00940000161091 #30	ENSGT00940000161227 #31	ENSGT00940000162143 #32	ENSGT00940000160469	ENSGT00930000151052 #33	ENSGT00940000159654 #34
Mus	ANCESTRAL SPECIES	3	ENSGT00940000158669 #7	ENSGT00940000154450 #8	ENSGT00530000063881.a.b #9	ENSGT00990000204354 #10	ENSGT01060000248564.a.b #11	ENSGT00440000035378.c #12	ENSGT00940000158484 #13	ENSGT00940000158000 #14	ENSGT00940000156197 #15	ENSGT00490000043398 #16	ENSGT00390000002428.a.g.a #17	ENSGT00910000144211.n.a.fb #18	ENSGT00940000160504 #19	ENSGT00940000160992 #20	ENSGT00940000161085 #21	ENSGT00940000157034 #22	ENSGT00940000153587.b #23	ENSGT00940000153511.a #24	ENSGT01010000222287.B.b.a.b.a #25	ENSGT00860000135869	ENSGT00950000182852.A.b #26	ENSGT00940000157193 #27	ENSGT00390000007769 #28	ENSGT00450000040404.a	ENSGT00940000155503 #29	ENSGT00940000161091 #30	ENSGT00940000161227 #31	ENSGT00940000162143 #32	ENSGT00940000160469	ENSGT00930000151052 #33	ENSGT00940000159654 #34
Mus_A	ANCESTRAL SPECIES	3	ENSGT00940000158669 #7	ENSGT00940000154450 #8	ENSGT00530000063881.a.b #9	ENSGT00990000204354 #10	ENSGT01060000248564.a.b #11	ENSGT00440000035378.c #12	ENSGT00940000158484 #13	ENSGT00940000158000 #14	ENSGT00940000156197 #15	ENSGT00490000043398 #16	ENSGT00390000002428.a.g.a #17	ENSGT00910000144211.n.a.fb #18	ENSGT00940000160504 #19	ENSGT00940000160992 #20	ENSGT00940000161085 #21	ENSGT00940000157034 #22	ENSGT00940000153587.b #23	ENSGT00940000153511.a #24	ENSGT01010000222287.B.b.a.b.a #25	ENSGT00860000135869	ENSGT00950000182852.A.b #26	ENSGT00940000157193 #27	ENSGT00390000007769 #28	ENSGT00450000040404.a	ENSGT00940000155503 #29	ENSGT00940000161091 #30	ENSGT00940000161227 #31	ENSGT00940000162143 #32	ENSGT00940000160469	ENSGT00930000151052 #33	ENSGT00940000159654 #34
Ryukyu mouse	MODERN SPECIES	13	Il22ra1 (MGP_CAROLIEiJ_G0026643)	Myom3 (MGP_CAROLIEiJ_G0026644) #7	Srsf10 (MGP_CAROLIEiJ_G0026645) #8	Pnrc2 (MGP_CAROLIEiJ_G0026646) #9	Cnr2 (MGP_CAROLIEiJ_G0026647) #11	Fuca1 (MGP_CAROLIEiJ_G0026648) #12	Hmgcl (MGP_CAROLIEiJ_G0026649) #13	Gale (MGP_CAROLIEiJ_G0026650) #14	Lypla2 (MGP_CAROLIEiJ_G0026651) #15	Pithd1 (MGP_CAROLIEiJ_G0026652) #16	Eloa (MGP_CAROLIEiJ_G0026653) #17	MGP_CAROLIEiJ_G0026654 ##18	Id3 (MGP_CAROLIEiJ_G0026655) #19	E2f2 (MGP_CAROLIEiJ_G0026656) #20	Asap3 (MGP_CAROLIEiJ_G0026657) #21	Tcea3 (MGP_CAROLIEiJ_G0026658) #22	MGP_CAROLIEiJ_G0026659 ##23	Hnrnpr (MGP_CAROLIEiJ_G0026660) #24	Htr1d (MGP_CAROLIEiJ_G0026661) #25	MGP_CAROLIEiJ_G0026662	Luzp1 (MGP_CAROLIEiJ_G0026663) #26	Kdm1a (MGP_CAROLIEiJ_G0026664) #27	Tex46 (MGP_CAROLIEiJ_G0026665) #28	Lactbl1 (MGP_CAROLIEiJ_G0026666)	Ephb2 (MGP_CAROLIEiJ_G0026667) #29	C1qb (MGP_CAROLIEiJ_G0026668) #30	C1qc (MGP_CAROLIEiJ_G0026669) #31	C1qa (MGP_CAROLIEiJ_G0026670) #32	Epha8 (MGP_CAROLIEiJ_G0026671)	Zbtb40 (MGP_CAROLIEiJ_G0026672) #33	Wnt4 (MGP_CAROLIEiJ_G0026673) #34
Mus_B	ANCESTRAL SPECIES	5	ENSGT00940000158669 #7	ENSGT00940000154450 #8	ENSGT00530000063881.a.b #9	ENSGT00990000204354 #10	ENSGT01060000248564.a.b #11	ENSGT00440000035378.c #12	ENSGT00940000158484 #13	ENSGT00940000158000 #14	ENSGT00940000156197 #15	ENSGT00490000043398 #16	ENSGT00390000002428.a.g.a #17	ENSGT00910000144211.n.a.fb #18	ENSGT00940000160504 #19	ENSGT00940000160992 #20	ENSGT00940000161085 #21	ENSGT00940000157034 #22	ENSGT00940000153587.b #23	ENSGT00940000153511.a #24	ENSGT01010000222287.B.b.a.b.a #25	ENSGT00860000135869	ENSGT00950000182852.A.b #26	ENSGT00940000157193 #27	ENSGT00390000007769 #28	ENSGT00450000040404.a	ENSGT00940000155503 #29	ENSGT00940000161091 #30	ENSGT00940000161227 #31	ENSGT00940000162143 #32	ENSGT00940000160469	ENSGT00930000151052 #33	ENSGT00940000159654 #34
Mouse	MODERN SPECIES	13	Il22ra1 (ENSMUSG00000037157)	Myom3 (ENSMUSG00000037139) #7	Srsf10 (ENSMUSG00000028676) #8	Pnrc2 (ENSMUSG00000028675) #9	Cnr2 (ENSMUSG00000062585) #11	Fuca1 (ENSMUSG00000028673) #12	Hmgcl (ENSMUSG00000028672) #13	Gale (ENSMUSG00000028671) #14	Lypla2 (ENSMUSG00000028670) #15	Pithd1 (ENSMUSG00000028669) #16	Eloa (ENSMUSG00000028668) #17	Rpl11 (ENSMUSG00000059291) #18	Id3 (ENSMUSG00000007872) #19	E2f2 (ENSMUSG00000018983) #20	Asap3 (ENSMUSG00000036995) #21	Tcea3 (ENSMUSG00000001604) #22	Zfp46 (ENSMUSG00000051351) #23	Hnrnpr (ENSMUSG00000066037) #24	Htr1d (ENSMUSG00000070687) #25	Luzp1 (ENSMUSG00000001089) #26	Kdm1a (ENSMUSG00000036940) #27	Tex46 (ENSMUSG00000036921) #28	Lactbl1 (ENSMUSG00000070683)	Ephb2 (ENSMUSG00000028664) #29	C1qb (ENSMUSG00000036905) #30	C1qc (ENSMUSG00000036896) #31	C1qa (ENSMUSG00000036887) #32	Epha8 (ENSMUSG00000028661)	Zbtb40 (ENSMUSG00000060862) #33	Wnt4 (ENSMUSG00000036856) #34	Cdc42 (ENSMUSG00000006699) ##35
Mus_C	ANCESTRAL SPECIES	2	ENSGT00940000158669 #7	ENSGT00940000154450 #8	ENSGT00530000063881.a.b #9	ENSGT00990000204354 #10	ENSGT01060000248564.a.b #11	ENSGT00440000035378.c #12	ENSGT00940000158484 #13	ENSGT00940000158000 #14	ENSGT00940000156197 #15	ENSGT00490000043398 #16	ENSGT00390000002428.a.g.a #17	ENSGT00910000144211.n.a.fb #18	ENSGT00940000160504 #19	ENSGT00940000160992 #20	ENSGT00940000161085 #21	ENSGT00940000157034 #22	ENSGT00940000153587.b #23	ENSGT00940000153511.a #24	ENSGT01010000222287.B.b.a.b.a #25	ENSGT00860000135869	ENSGT00950000182852.A.b #26	ENSGT00940000157193 #27	ENSGT00390000007769 #28	ENSGT00450000040404.a	ENSGT00940000155503 #29	ENSGT00940000161091 #30	ENSGT00940000161227 #31	ENSGT00940000162143 #32	ENSGT00940000160469	ENSGT00930000151052 #33	ENSGT00940000159654 #34
Steppe mouse	MODERN SPECIES	3343	Myom3 (ENSMSIG00000003941) #7	Srsf10 (ENSMSIG00000004072) #8	Pnrc2 (ENSMSIG00000004244) #9	ENSMSIG00000004251 #10	Cnr2 (ENSMSIG00000004270) #11	ENSMSIG00000004292 #12	Gale (ENSMSIG00000004402) #14	ENSMSIG00000004429 #15	Pithd1 (ENSMSIG00000004467) #16	ENSMSIG00000004478 #17	ENSMSIG00000004514 #18	ENSMSIG00000004560	Id3 (ENSMSIG00000004572) #19	E2f2 (ENSMSIG00000004591) #20	Asap3 (ENSMSIG00000004611) #21	Tcea3 (ENSMSIG00000004673) #22	Zfp46 (ENSMSIG00000004704) #23	Hnrnpr (ENSMSIG00000004715) #24	Htr1d (ENSMSIG00000004838) #25	ENSMSIG00000004861	Luzp1 (ENSMSIG00000004872) #26	Kdm1a (ENSMSIG00000004881) #27	Tex46 (ENSMSIG00000004994) #28	Lactbl1 (ENSMSIG00000005002)	Ephb2 (ENSMSIG00000005017) #29	C1qb (ENSMSIG00000005145) #30	C1qc (ENSMSIG00000005167) #31	C1qa (ENSMSIG00000005180) #32	Epha8 (ENSMSIG00000005187)	Zbtb40 (ENSMSIG00000005238) #33	Wnt4 (ENSMSIG00000005334) #34
spretus	MODERN SPECIES	13	Il22ra1 (MGP_SPRETEiJ_G0027623)	Myom3 (MGP_SPRETEiJ_G0027624) #7	MGP_SPRETEiJ_G0027625 #8	Pnrc2 (MGP_SPRETEiJ_G0027626) #9	Cnr2 (MGP_SPRETEiJ_G0027627) #11	Fuca1 (MGP_SPRETEiJ_G0027628) #12	Hmgcl (MGP_SPRETEiJ_G0027629) #13	Gale (MGP_SPRETEiJ_G0027630) #14	Lypla2 (MGP_SPRETEiJ_G0027631) #15	Pithd1 (MGP_SPRETEiJ_G0027632) #16	Eloa (MGP_SPRETEiJ_G0027633) #17	Rpl11 (MGP_SPRETEiJ_G0027634) #18	Id3 (MGP_SPRETEiJ_G0027635) #19	E2f2 (MGP_SPRETEiJ_G0027636) #20	Asap3 (MGP_SPRETEiJ_G0027637) #21	Tcea3 (MGP_SPRETEiJ_G0027638) #22	Zfp46 (MGP_SPRETEiJ_G0027639) #23	Htr1d (MGP_SPRETEiJ_G0027641) #25	MGP_SPRETEiJ_G0027642	Luzp1 (MGP_SPRETEiJ_G0027643) #26	Kdm1a (MGP_SPRETEiJ_G0027644) #27	Tex46 (MGP_SPRETEiJ_G0027645) #28	Lactbl1 (MGP_SPRETEiJ_G0027646)	Ephb2 (MGP_SPRETEiJ_G0027647) #29	C1qb (MGP_SPRETEiJ_G0027648) #30	C1qc (MGP_SPRETEiJ_G0027649) #31	C1qa (MGP_SPRETEiJ_G0027650) #32	Epha8 (MGP_SPRETEiJ_G0027651)	Zbtb40 (MGP_SPRETEiJ_G0027652) #33	Wnt4 (MGP_SPRETEiJ_G0027653) #34	Cdc42 (MGP_SPRETEiJ_G0027654) ##35
Shrew mouse	MODERN SPECIES	19	Il22ra1 (MGP_PahariEiJ_G0028976)	Myom3 (MGP_PahariEiJ_G0028977) #7	MGP_PahariEiJ_G0028978 #8	Pnrc2 (MGP_PahariEiJ_G0028979) #9	Cnr2 (MGP_PahariEiJ_G0028980) #11	Fuca1 (MGP_PahariEiJ_G0028981) #12	Hmgcl (MGP_PahariEiJ_G0028982) #13	Gale (MGP_PahariEiJ_G0028983) #14	Lypla2 (MGP_PahariEiJ_G0028984) #15	Pithd1 (MGP_PahariEiJ_G0028985) #16	Eloa (MGP_PahariEiJ_G0028986) #17	Rpl11 (MGP_PahariEiJ_G0028987) #18	Id3 (MGP_PahariEiJ_G0028988) #19	E2f2 (MGP_PahariEiJ_G0028989) #20	Asap3 (MGP_PahariEiJ_G0028990) #21	Tcea3 (MGP_PahariEiJ_G0028991) #22	Zfp46 (MGP_PahariEiJ_G0028992) #23	Hnrnpr (MGP_PahariEiJ_G0028993) #24	Htr1d (MGP_PahariEiJ_G0028994) #25	MGP_PahariEiJ_G0028995	Luzp1 (MGP_PahariEiJ_G0028996) #26	Kdm1a (MGP_PahariEiJ_G0028997) #27	Tex46 (MGP_PahariEiJ_G0028998) #28	Lactbl1 (MGP_PahariEiJ_G0028999)	Ephb2 (MGP_PahariEiJ_G0029000) #29	C1qb (MGP_PahariEiJ_G0029001) #30	C1qc (MGP_PahariEiJ_G0029002) #31	C1qa (MGP_PahariEiJ_G0029003) #32	Epha8 (MGP_PahariEiJ_G0029004)	Zbtb40 (MGP_PahariEiJ_G0029005) #33	Wnt4 (MGP_PahariEiJ_G0029006) #34
Rat	MODERN SPECIES	15	Pnrc2 (ENSRNOG00000070268) #9	Pnrc2 (ENSRNOG00000009248) #10	Cnr2 (ENSRNOG00000009260) #11	Fuca1 (ENSRNOG00000009325) #12	Hmgcl (ENSRNOG00000009422) #13	Gale (ENSRNOG00000009712) #14	Lypla2 (ENSRNOG00000010067) #15	Pithd1 (ENSRNOG00000010873) #16	ENSRNOG00000070717	Eloa (ENSRNOG00000010902) #17	Rpl11 (ENSRNOG00000026260) #18	Rpl36-ps3 (ENSRNOG00000060478)	Id3 (ENSRNOG00000026124) #19	E2f2 (ENSRNOG00000047741) #20	Asap3 (ENSRNOG00000049714) #21	Tcea3 (ENSRNOG00000011794) #22	Zfp46 (ENSRNOG00000070170)	Hnrnpr (ENSRNOG00000011910) #24	Htr1d (ENSRNOG00000012038) #25	Luzp1 (ENSRNOG00000022402) #26	Kdm1a (ENSRNOG00000022372) #27	Tex46 (ENSRNOG00000022257) #28	Lactbl1 (ENSRNOG00000065157)	Ephb2 (ENSRNOG00000012531) #29	C1qb (ENSRNOG00000012749) #30	C1qc (ENSRNOG00000012804) #31	C1qa (ENSRNOG00000012807) #32	Epha8 (ENSRNOG00000013036)	Zbtb40 (ENSRNOG00000022039) #33	Wnt4 (ENSRNOG00000013166) #34	Cdc42 (ENSRNOG00000013536) ##35
Upper Galilee mountains blind mole rat	MODERN SPECIES	1446	Il22ra1 (ENSNGAG00000015232)	Myom3 (ENSNGAG00000011740) #7	Srsf10 (ENSNGAG00000000067) #8	Pnrc2 (ENSNGAG00000002697) #9	Cnr2 (ENSNGAG00000014997) #11	Fuca1 (ENSNGAG00000000221) #12	Hmgcl (ENSNGAG00000018763) #13	Gale (ENSNGAG00000017158) #14	Lypla2 (ENSNGAG00000015285) #15	Pithd1 (ENSNGAG00000013429) #16	Eloa (ENSNGAG00000013323) #17	Rpl11 (ENSNGAG00000018109) #18	Id3 (ENSNGAG00000001410) #19	E2f2 (ENSNGAG00000015525) #20	Asap3 (ENSNGAG00000008083) #21	Tcea3 (ENSNGAG00000017123) #22	Zfp46 (ENSNGAG00000014531) #23	Hnrnpr (ENSNGAG00000018973) #24	Htr1d (ENSNGAG00000013390) #25	ENSNGAG00000011666	Kdm1a (ENSNGAG00000010536) #27	Tex46 (ENSNGAG00000016597) #28	Ephb2 (ENSNGAG00000011224) #29	C1qb (ENSNGAG00000015245) #30	C1qc (ENSNGAG00000014944) #31	C1qa (ENSNGAG00000012795) #32	Epha8 (ENSNGAG00000016355)	Zbtb40 (ENSNGAG00000019354) #33	Wnt4 (ENSNGAG00000010862) #34	Cdc42 (ENSNGAG00000002880) ##35	ENSNGAG00000014109 #36
Lesser Egyptian jerboa	MODERN SPECIES	63	Il22ra1 (ENSJJAG00000017430)	Myom3 (ENSJJAG00000001690) #7	ENSJJAG00000009074 #8	ENSJJAG00000005186 #9	Cnr2 (ENSJJAG00000005102) #11	Fuca1 (ENSJJAG00000012173) #12	Hmgcl (ENSJJAG00000013840) #13	Gale (ENSJJAG00000011124) #14	Lypla2 (ENSJJAG00000006819) #15	Pithd1 (ENSJJAG00000010008) #16	ENSJJAG00000016031 #18	ENSJJAG00000004828	Id3 (ENSJJAG00000010712) #19	E2f2 (ENSJJAG00000013012) #20	Asap3 (ENSJJAG00000010949) #21	Tcea3 (ENSJJAG00000010720) #22	Zfp46 (ENSJJAG00000014588) #23	Hnrnpr (ENSJJAG00000017723) #24	Htr1d (ENSJJAG00000005412) #25	Luzp1 (ENSJJAG00000015238) #26	Kdm1a (ENSJJAG00000012453) #27	Lactbl1 (ENSJJAG00000015220)	Ephb2 (ENSJJAG00000013346) #29	C1qb (ENSJJAG00000017879) #30	C1qc (ENSJJAG00000012870) #31	C1qa (ENSJJAG00000016238) #32	Epha8 (ENSJJAG00000015371)	Zbtb40 (ENSJJAG00000018013) #33	Wnt4 (ENSJJAG00000015637) #34	ENSJJAG00000011592 #35	ENSJJAG00000009940 #36
Kangaroo rat	MODERN SPECIES	325	Il22ra1 (ENSDORG00000029927)	Myom3 (ENSDORG00000013358) #7	Srsf10 (ENSDORG00000024574) #8	Pnrc2 (ENSDORG00000009138) #9	Cnr2 (ENSDORG00000025264) #11	Fuca1 (ENSDORG00000000643) #12	Hmgcl (ENSDORG00000011123) #13	Gale (ENSDORG00000011121) #14	Lypla2 (ENSDORG00000011120) #15	Pithd1 (ENSDORG00000025820) #16	Eloa (ENSDORG00000027293) #17	Rpl11 (ENSDORG00000012496) #18	Id3 (ENSDORG00000006203) #19	E2f2 (ENSDORG00000003554) #20	Asap3 (ENSDORG00000003550) #21	Tcea3 (ENSDORG00000007440) #22	Zfp46 (ENSDORG00000007438) #23	Hnrnpr (ENSDORG00000007435) #24	ENSDORG00000024913	Luzp1 (ENSDORG00000024149) #26	Kdm1a (ENSDORG00000011724) #27	Tex46 (ENSDORG00000027716) #28	Lactbl1 (ENSDORG00000028404)	Ephb2 (ENSDORG00000012114) #29	C1qb (ENSDORG00000013748) #30	C1qc (ENSDORG00000024738) #31	C1qa (ENSDORG00000023788) #32	Epha8 (ENSDORG00000014542)	Zbtb40 (ENSDORG00000016495) #33	Wnt4 (ENSDORG00000016273) #34	Hspg2 (ENSDORG00000013115)