Amniota	ANCESTRAL SPECIES	6	ENSGT00940000156832	ENSGT00950000183570	ENSGT00940000157879	ENSGT00530000062962.a.a	ENSGT00940000158054	ENSGT00940000158470	ENSGT00940000156797	ENSGT00940000156712	ENSGT01030000234625.D	ENSGT00940000159893	ENSGT00940000156507	ENSGT00390000017724.a.b	ENSGT00390000002188	ENSGT00940000164632.a	ENSGT00940000153568.B #21	ENSGT00390000011515 #22	ENSGT00940000154817.b.b.b #23	ENSGT00940000159158 #24	ENSGT00940000159213 #25	ENSGT00940000159862 #26	ENSGT00940000155984 #27	ENSGT00940000165735	ENSGT00940000156332 #29	ENSGT00940000157211 #30	ENSGT00390000010354 #32	ENSGT00940000156353	ENSGT00940000160228	ENSGT00940000160532 #20	ENSGT00510000049102 #19	ENSGT00950000182882.A.b.b #17	ENSGT00950000182905.a.b #16
Mammalia	ANCESTRAL SPECIES	59															ENSGT00940000153568.B #21	ENSGT00390000011515 #22	ENSGT00940000154817.b.b.b #23	ENSGT00940000159158 #24	ENSGT00940000159213 #25	ENSGT00940000159862 #26	ENSGT00940000155984 #27	ENSGT00940000165735	ENSGT00940000156332 #29	ENSGT00940000157211 #30	ENSGT00390000010354 #32	ENSGT00940000156353	ENSGT00940000160532 #20	ENSGT00510000049102 #19	ENSGT00950000182882.A.b.b #17	ENSGT00950000182905.a.b #16	ENSGT00390000002204 #15
Theria	ANCESTRAL SPECIES	5	ENSGT00730000111130 #7	ENSGT00390000018525.b #8	ENSGT00940000153518.d.a #9	ENSGT01100000263537.b.a.a.b.a #10	ENSGT00940000166878	ENSGT00940000157247 #11	ENSGT00720000108834 #12	ENSGT00940000165072	ENSGT00940000154505.B #13	ENSGT00940000156884 #14	ENSGT00390000002204 #15	ENSGT00950000182905.a.b #16	ENSGT00950000182882.A.b.b #17	ENSGT00950000182825.A.a.b.a.a	ENSGT00940000153568.B #21	ENSGT00390000011515 #22	ENSGT00940000154817.b.b.b #23	ENSGT00940000159158 #24	ENSGT00940000159213 #25	ENSGT00940000159862 #26	ENSGT00940000155984 #27	ENSGT00940000156332 #29	ENSGT00940000157211 #30	ENSGT00390000010354 #32	ENSGT00390000006925 #33	ENSGT00940000165152	ENSGT00940000160618 #34	ENSGT00390000006225 #35	ENSGT00940000154846.b #36	ENSGT00390000015352 #37	ENSGT00390000008042.A.b
Eutheria	ANCESTRAL SPECIES	10	ENSGT00730000111130 #7	ENSGT00390000018525.b #8	ENSGT00940000153518.d.a #9	ENSGT01100000263537.b.a.a.b.a #10	ENSGT00940000166878	ENSGT00940000157247 #11	ENSGT00720000108834 #12	ENSGT00940000154505.B #13	ENSGT00940000156884 #14	ENSGT00390000002204 #15	ENSGT00950000182905.a.b #16	ENSGT00950000182882.A.b.b #17	ENSGT00510000049102 #19	ENSGT00940000160532 #20	ENSGT00940000153568.B #21	ENSGT00390000011515 #22	ENSGT00940000154817.b.b.b #23	ENSGT00940000159158 #24	ENSGT00940000159213 #25	ENSGT00940000159862 #26	ENSGT00940000155984 #27	ENSGT00940000156332 #29	ENSGT00940000157211 #30	ENSGT00390000010354 #32	ENSGT00390000006925 #33	ENSGT00940000165152	ENSGT00940000160618 #34	ENSGT00390000006225 #35	ENSGT00940000154846.b #36	ENSGT00390000015352 #37	ENSGT00390000008042.A.b
Boreoeutheria	ANCESTRAL SPECIES	14	ENSGT00730000111130 #7	ENSGT00390000018525.b #8	ENSGT00940000153518.d.a #9	ENSGT01100000263537.b.a.a.b.a #10	ENSGT00940000166878	ENSGT00940000157247 #11	ENSGT00720000108834 #12	ENSGT00940000154505.B #13	ENSGT00940000156884 #14	ENSGT00390000002204 #15	ENSGT00950000182905.a.b #16	ENSGT00950000182882.A.b.b #17	ENSGT00510000049102 #19	ENSGT00940000160532 #20	ENSGT00940000153568.B #21	ENSGT00390000011515 #22	ENSGT00940000154817.b.b.b #23	ENSGT00940000159158 #24	ENSGT00940000159213 #25	ENSGT00910000147009	ENSGT00910000148632	ENSGT00940000159862 #26	ENSGT00940000155984 #27	ENSGT00940000163000 #28	ENSGT00940000156332 #29	ENSGT00940000157211 #30	ENSGT00390000010354 #32	ENSGT00390000006925 #33	ENSGT00940000165152	ENSGT00940000160618 #34	ENSGT00390000006225 #35
Euarchontoglires	ANCESTRAL SPECIES	14	ENSGT00390000018525.b #8	ENSGT00940000153518.d.a #9	ENSGT01100000263537.b.a.a.b.a #10	ENSGT00940000166878	ENSGT00940000157247 #11	ENSGT00720000108834 #12	ENSGT00940000154505.B #13	ENSGT00940000156884 #14	ENSGT00390000002204 #15	ENSGT00950000182905.a.b #16	ENSGT00950000182882.A.b.b #17	ENSGT01040000240573 #18	ENSGT00510000049102 #19	ENSGT00940000160532 #20	ENSGT00940000153568.B #21	ENSGT00390000011515 #22	ENSGT00940000154817.b.b.b #23	ENSGT00940000159158 #24	ENSGT00940000159213 #25	ENSGT00910000148632	ENSGT00940000159862 #26	ENSGT00910000147009	ENSGT00940000155984 #27	ENSGT00940000163000 #28	ENSGT00940000156332 #29	ENSGT00940000157211 #30	ENSGT00390000010354 #32	ENSGT00390000006925 #33	ENSGT00940000165152	ENSGT00940000160618 #34	ENSGT00390000006225 #35
Primates	ANCESTRAL SPECIES	13	ENSGT00730000111130 #7	ENSGT00390000018525.b #8	ENSGT01100000263537.b.a.a.b.a #10	ENSGT00940000153518.d.a #9	ENSGT00940000157247 #11	ENSGT00720000108834 #12	ENSGT00940000154505.B #13	ENSGT00940000156884 #14	ENSGT00390000002204 #15	ENSGT00950000182905.a.b #16	ENSGT00950000182882.A.b.b #17	ENSGT01040000240573 #18	ENSGT00510000049102 #19	ENSGT00940000160532 #20	ENSGT00940000153568.B #21	ENSGT00390000011515 #22	ENSGT00940000154817.b.b.b #23	ENSGT00940000159158 #24	ENSGT00940000159213 #25	ENSGT00910000148632	ENSGT00940000159862 #26	ENSGT00910000147009	ENSGT00940000155984 #27	ENSGT00940000163000 #28	ENSGT00940000156332 #29	ENSGT00940000157211 #30	ENSGT00390000010354 #32	ENSGT00390000006925 #33	ENSGT00940000160618 #34	ENSGT00390000006225 #35	ENSGT00940000154846.b #36
Haplorrhini	ANCESTRAL SPECIES	10	ENSGT00730000111130 #7	ENSGT00390000018525.b #8	ENSGT01100000263537.b.a.a.b.a #10	ENSGT00940000153518.d.a #9	ENSGT00940000157247 #11	ENSGT00720000108834 #12	ENSGT00940000154505.B #13	ENSGT00940000156884 #14	ENSGT00390000002204 #15	ENSGT00950000182905.a.b #16	ENSGT00950000182882.A.b.b #17	ENSGT01040000240573 #18	ENSGT00510000049102 #19	ENSGT00940000160532 #20	ENSGT00940000153568.B #21	ENSGT00390000011515 #22	ENSGT00940000154817.b.b.b #23	ENSGT00940000159158 #24	ENSGT00940000159213 #25	ENSGT00910000147009	ENSGT00940000159862 #26	ENSGT00940000155984 #27	ENSGT00940000163000 #28	ENSGT00940000156332 #29	ENSGT00940000157211 #30	ENSGT00390000010354 #32	ENSGT00390000006925 #33	ENSGT00940000160618 #34	ENSGT00390000006225 #35	ENSGT00940000154846.b #36	ENSGT00390000015352 #37
Simiiformes	DUPLICATION
Simiiformes	ANCESTRAL SPECIES	15	ENSGT01100000263537.b.a.a.b.a #10	ENSGT00940000153518.d.a #9	ENSGT00940000157247 #11	ENSGT00720000108834 #12	ENSGT00940000154474.C	ENSGT00910000147148	ENSGT00940000154505.B #13	ENSGT00940000156884 #14	ENSGT00390000002204 #15	ENSGT00950000182905.a.b #16	ENSGT00950000182882.A.b.b #17	ENSGT01040000240573 #18	ENSGT00510000049102 #19	ENSGT00940000160532 #20	ENSGT00940000153568.B #21	ENSGT00390000011515.d #22	ENSGT00940000154817.b.b.b #23	ENSGT00940000159158 #24	ENSGT00940000159213 #25	ENSGT00910000147009	ENSGT00940000159862 #26	ENSGT00940000155984 #27	ENSGT00940000163000 #28	ENSGT00940000156332 #29	ENSGT00940000157211 #30	ENSGT00390000010354 #32	ENSGT00390000006925 #33	ENSGT00940000160618 #34	ENSGT00390000006225 #35	ENSGT00940000154846.b.k.a #36	ENSGT00390000015352 #37
Catarrhini	ANCESTRAL SPECIES	16	ENSGT00390000018525.b #8	ENSGT01100000263537.b.a.a.b.a #10	ENSGT00940000153518.d.a #9	ENSGT00940000157247 #11	ENSGT00720000108834 #12	ENSGT00940000154505.B #13	ENSGT00910000147148	ENSGT00940000156884 #14	ENSGT00390000002204 #15	ENSGT00950000182905.a.b #16	ENSGT00950000182882.A.b.b #17	ENSGT01040000240573 #18	ENSGT00510000049102 #19	ENSGT00940000160532 #20	ENSGT00940000153568.B #21	ENSGT00390000011515.d #22	ENSGT00940000154817.b.b.b #23	ENSGT00940000159158 #24	ENSGT00940000159213 #25	ENSGT00910000147009	ENSGT00940000159862 #26	ENSGT00940000155984 #27	ENSGT00940000163000 #28	ENSGT00940000156332 #29	ENSGT00940000157211 #30	ENSGT00910000146971 #31	ENSGT00390000010354 #32	ENSGT00390000006925 #33	ENSGT00940000160618 #34	ENSGT00390000006225 #35	ENSGT00940000154846.b.k.a #36
Hominoidea	ANCESTRAL SPECIES	15	ENSGT00940000153518.d.a #9	ENSGT00940000157247 #11	ENSGT00720000108834 #12	ENSGT00910000147963	ENSGT00940000154505.B #13	ENSGT00910000147148	ENSGT00940000156884 #14	ENSGT00390000002204 #15	ENSGT00940000162350.b.a	ENSGT00950000182905.a.b #16	ENSGT00950000182882.A.b.b #17	ENSGT01040000240573 #18	ENSGT00510000049102 #19	ENSGT00940000160532 #20	ENSGT00940000153568.B #21	ENSGT00390000011515.d #22	ENSGT00940000154817.b.b.b #23	ENSGT00940000159158 #24	ENSGT00910000147780	ENSGT00940000159213 #25	ENSGT00910000147009	ENSGT00910000148632	ENSGT00940000159862 #26	ENSGT00940000155984 #27	ENSGT00940000163000 #28	ENSGT00940000156332 #29	ENSGT00940000157211 #30	ENSGT00910000146971 #31	ENSGT00390000010354 #32	ENSGT00390000006925 #33	ENSGT00940000160618 #34
Hominidae	ANCESTRAL SPECIES	17	ENSGT01100000263537.b.a.a.b.a #10	ENSGT00940000153518.d.a #9	ENSGT00940000157247 #11	ENSGT00720000108834 #12	ENSGT00910000147963	ENSGT00940000154505.B #13	ENSGT00940000156884 #14	ENSGT00390000002204 #15	ENSGT00940000162350.b.a	ENSGT00950000182905.a.b #16	ENSGT00950000182882.A.b.b #17	ENSGT01040000240573 #18	ENSGT00510000049102 #19	ENSGT00940000160532 #20	ENSGT00940000153568.B #21	ENSGT00390000011515.d #22	ENSGT00940000154817.b.b.b #23	ENSGT00940000159158 #24	ENSGT00910000147780	ENSGT00940000159213 #25	ENSGT00940000159862 #26	ENSGT00940000155984 #27	ENSGT00940000163000 #28	ENSGT00940000156332 #29	ENSGT00940000157211 #30	ENSGT00910000146971 #31	ENSGT00390000010354 #32	ENSGT00390000006925 #33	ENSGT00940000160618 #34	ENSGT00390000006225 #35	ENSGT00940000154846.b.k.a #36
Orangutan	MODERN SPECIES	15	WDR33 (ENSPPYG00000012760) #7	SFT2D3 (ENSPPYG00000012762) #8	LIMS2 (ENSPPYG00000012763) #9	GPR17 (ENSPPYG00000012764) #10	MYO7B (ENSPPYG00000012765) #11	IWS1 (ENSPPYG00000012766) #12	PROC (ENSPPYG00000012767) #13	MAP3K2 (ENSPPYG00000012768) #14	ERCC3 (ENSPPYG00000012769) #15	CYP27C1 (ENSPPYG00000012770) #16	BIN1 (ENSPPYG00000012771) #17	ENSPPYG00000038851 #18	ENSPPYG00000034527 #19	CNTNAP5 (ENSPPYG00000012773) #20	TSN (ENSPPYG00000034006) #21	NIFK (ENSPPYG00000032833) #22	CLASP1 (ENSPPYG00000012776) #23	TFCP2L1 (ENSPPYG00000012777) #24	GLI2 (ENSPPYG00000012778) #25	INHBB (ENSPPYG00000012780) #26	RALB (ENSPPYG00000012781) #27	TMEM185B (ENSPPYG00000033591) #28	EPB41L5 (ENSPPYG00000012783) #29	PTPN4 (ENSPPYG00000012784) #30	ENSPPYG00000040596 #31	TMEM177 (ENSPPYG00000040727) #32	CFAP221 (ENSPPYG00000012785) #33	SCTR (ENSPPYG00000012786) #34	TMEM37 (ENSPPYG00000030402) #35	ENSPPYG00000012788 #36	C2BH2orf76 (ENSPPYG00000012789) #37
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	14	ENSGT01100000263537.b.a.a.b.a #10	ENSGT00940000153518.d.a #9	ENSGT00940000157247 #11	ENSGT00720000108834 #12	ENSGT00910000147963	ENSGT00940000154505.B #13	ENSGT00940000156884 #14	ENSGT00390000002204 #15	ENSGT00940000162350.b.a	ENSGT00950000182905.a.b #16	ENSGT00950000182882.A.b.b #17	ENSGT01040000240573 #18	ENSGT00510000049102 #19	ENSGT00940000160532 #20	ENSGT00940000153568.B #21	ENSGT00390000011515.d #22	ENSGT00940000154817.b.b.b #23	ENSGT00940000159158 #24	ENSGT00910000147780	ENSGT00940000159213 #25	ENSGT00940000159862 #26	ENSGT00940000155984 #27	ENSGT00940000163000 #28	ENSGT00940000156332 #29	ENSGT00940000157211 #30	ENSGT00910000146971 #31	ENSGT00390000010354 #32	ENSGT00390000006925 #33	ENSGT00940000160618 #34	ENSGT00390000006225 #35	ENSGT00940000154846.b.k.a #36
Homo/Pan group	ANCESTRAL SPECIES	13	ENSGT00940000153518.d.a #9	ENSGT00940000157247 #11	ENSGT00720000108834 #12	ENSGT00910000147963	ENSGT00940000154505.B #13	ENSGT00940000156884 #14	ENSGT00390000002204 #15	ENSGT00940000162350.b.a	ENSGT00940000162350.b.b	ENSGT00950000182905.a.b #16	ENSGT00950000182882.A.b.b #17	ENSGT01040000240573 #18	ENSGT00510000049102 #19	ENSGT00940000160532 #20	ENSGT00940000153568.B #21	ENSGT00390000011515.d #22	ENSGT00940000154817.b.b.b #23	ENSGT00940000159158 #24	ENSGT00910000147780	ENSGT00940000159213 #25	ENSGT00940000159862 #26	ENSGT00940000155984 #27	ENSGT00940000163000 #28	ENSGT00940000156332 #29	ENSGT00940000157211 #30	ENSGT00910000146971 #31	ENSGT00390000010354 #32	ENSGT00390000006925 #33	ENSGT00940000160618 #34	ENSGT00390000006225 #35	ENSGT00940000154846.b.k.a #36
Pan	ANCESTRAL SPECIES	12	ENSGT01100000263537.b.a.a.b.a #10	ENSGT00940000153518.d.a #9	ENSGT00940000157247 #11	ENSGT00720000108834 #12	ENSGT00910000147963	ENSGT00940000154505.B #13	ENSGT00940000156884 #14	ENSGT00390000002204 #15	ENSGT00950000182905.a.b #16	ENSGT00950000182882.A.b.b #17	ENSGT01040000240573 #18	ENSGT00510000049102 #19	ENSGT01090000260040.a.a.b	ENSGT00940000160532 #20	ENSGT00940000153568.B #21	ENSGT00390000011515.d #22	ENSGT00940000154817.b.b.b #23	ENSGT00940000159158 #24	ENSGT00910000147780	ENSGT00940000159213 #25	ENSGT00940000159862 #26	ENSGT00940000155984 #27	ENSGT00940000163000 #28	ENSGT00940000156332 #29	ENSGT00940000157211 #30	ENSGT00910000146971 #31	ENSGT00390000010354 #32	ENSGT00390000006925 #33	ENSGT00940000160618 #34	ENSGT00390000006225 #35	ENSGT00940000154846.b.k.a #36
Chimpanzee	MODERN SPECIES	15	LIMS2 (ENSPTRG00000012432) #9	MYO7B (ENSPTRG00000012431) #11	IWS1 (ENSPTRG00000012429) #12	ENSPTRG00000044932	PROC (ENSPTRG00000012428) #13	MAP3K2 (ENSPTRG00000012427) #14	ERCC3 (ENSPTRG00000046940) #15	ENSPTRG00000049647	ENSPTRG00000012425 #16	BIN1 (ENSPTRG00000012423) #17	TEX51 (ENSPTRG00000047984) #18	GYPC (ENSPTRG00000012422) #19	ENSPTRG00000048725	CNTNAP5 (ENSPTRG00000012421) #20	TSN (ENSPTRG00000012420) #21	NIFK (ENSPTRG00000012419) #22	CLASP1 (ENSPTRG00000012416) #23	TFCP2L1 (ENSPTRG00000012415) #24	ENSPTRG00000045024	GLI2 (ENSPTRG00000012413) #25	INHBB (ENSPTRG00000046739) #26	RALB (ENSPTRG00000050663) #27	TMEM185B (ENSPTRG00000044584) #28	EPB41L5 (ENSPTRG00000012408) #29	PTPN4 (ENSPTRG00000012406) #30	ENSPTRG00000047573 #31	ENSPTRG00000045331 #32	CFAP221 (ENSPTRG00000012404) #33	SCTR (ENSPTRG00000012403) #34	TMEM37 (ENSPTRG00000042156) #35	DBI (ENSPTRG00000012401) #36
Bonobo	MODERN SPECIES	15	MYO7B (ENSPPAG00000030917) #11	IWS1 (ENSPPAG00000041331) #12	ENSPPAG00000000728	PROC (ENSPPAG00000038557) #13	MAP3K2 (ENSPPAG00000034915) #14	ERCC3 (ENSPPAG00000036166) #15	ENSPPAG00000035384	CYP27C1 (ENSPPAG00000034792) #16	BIN1 (ENSPPAG00000043916) #17	ENSPPAG00000036231 #18	ENSPPAG00000043590 #19	ENSPPAG00000031077	ENSPPAG00000030268	CNTNAP5 (ENSPPAG00000030731) #20	TSN (ENSPPAG00000032878) #21	NIFK (ENSPPAG00000034981) #22	CLASP1 (ENSPPAG00000043102) #23	TFCP2L1 (ENSPPAG00000028120) #24	ENSPPAG00000042100	GLI2 (ENSPPAG00000036988) #25	ENSPPAG00000003514	RALB (ENSPPAG00000035798) #27	ENSPPAG00000030838 #28	EPB41L5 (ENSPPAG00000037104) #29	PTPN4 (ENSPPAG00000007018) #30	ENSPPAG00000038871 #31	ENSPPAG00000032632 #32	CFAP221 (ENSPPAG00000026562) #33	SCTR (ENSPPAG00000011217) #34	TMEM37 (ENSPPAG00000039178) #35	DBI (ENSPPAG00000038470) #36
Human	MODERN SPECIES	11	SFT2D3 (ENSG00000173349) #8	WDR33 (ENSG00000136709) #7	GPR17 (ENSG00000144230) #10	LIMS2 (ENSG00000072163) #9	MYO7B (ENSG00000169994) #11	IWS1 (ENSG00000163166) #12	PROC (ENSG00000115718) #13	MAP3K2 (ENSG00000169967) #14	ERCC3 (ENSG00000163161) #15	CYP27C1 (ENSG00000186684) #16	BIN1 (ENSG00000136717) #17	TEX51 (ENSG00000237524) #18	GYPC (ENSG00000136732) #19	CNTNAP5 (ENSG00000155052) #20	TSN (ENSG00000211460) #21	NIFK (ENSG00000155438) #22	CLASP1 (ENSG00000074054) #23	TFCP2L1 (ENSG00000115112) #24	GLI2 (ENSG00000074047) #25	INHBB (ENSG00000163083) #26	RALB (ENSG00000144118) #27	TMEM185B (ENSG00000226479) #28	EPB41L5 (ENSG00000115109) #29	PTPN4 (ENSG00000088179) #30	TMEM177 (ENSG00000144120) #32	CFAP221 (ENSG00000163075) #33	SCTR (ENSG00000080293) #34	TMEM37 (ENSG00000171227) #35	DBI (ENSG00000155368) #36	C2orf76 (ENSG00000186132) #37	STEAP3 (ENSG00000115107)
Gorilla	MODERN SPECIES	15	LIMS2 (ENSGGOG00000004750) #9	MYO7B (ENSGGOG00000004731) #11	ENSGGOG00000036448	IWS1 (ENSGGOG00000010404) #12	ENSGGOG00000028437	PROC (ENSGGOG00000016104) #13	MAP3K2 (ENSGGOG00000004601) #14	ERCC3 (ENSGGOG00000015255) #15	ENSGGOG00000040748	ENSGGOG00000005813 #16	BIN1 (ENSGGOG00000016056) #17	ENSGGOG00000039804 #18	ENSGGOG00000025230	CNTNAP5 (ENSGGOG00000002898) #20	TSN (ENSGGOG00000002216) #21	NIFK (ENSGGOG00000023498) #22	CLASP1 (ENSGGOG00000008630) #23	TFCP2L1 (ENSGGOG00000001680) #24	ENSGGOG00000041702	GLI2 (ENSGGOG00000009653) #25	INHBB (ENSGGOG00000015308) #26	RALB (ENSGGOG00000001648) #27	ENSGGOG00000037010 #28	EPB41L5 (ENSGGOG00000005823) #29	PTPN4 (ENSGGOG00000003104) #30	ENSGGOG00000038500 #31	ENSGGOG00000042665 #32	CFAP221 (ENSGGOG00000015489) #33	SCTR (ENSGGOG00000010385) #34	TMEM37 (ENSGGOG00000010383) #35	ENSGGOG00000010372 #36
Gibbon	MODERN SPECIES	12	MYO7B (ENSNLEG00000015810) #11	IWS1 (ENSNLEG00000015759) #12	ENSNLEG00000030079	PROC (ENSNLEG00000015740) #13	ENSNLEG00000032384	MAP3K2 (ENSNLEG00000015690) #14	ERCC3 (ENSNLEG00000015665) #15	ENSNLEG00000006384	ENSNLEG00000015652 #16	BIN1 (ENSNLEG00000015593) #17	ENSNLEG00000029778 #18	CNTNAP5 (ENSNLEG00000015567) #20	ENSNLEG00000028278	ENSNLEG00000028128	TSN (ENSNLEG00000032773) #21	NIFK (ENSNLEG00000001163) #22	CLASP1 (ENSNLEG00000001007) #23	TFCP2L1 (ENSNLEG00000000988) #24	ENSNLEG00000032299	ENSNLEG00000030295	GLI2 (ENSNLEG00000000944) #25	ENSNLEG00000029219 #26	RALB (ENSNLEG00000000919) #27	ENSNLEG00000033832 #28	EPB41L5 (ENSNLEG00000000875) #29	PTPN4 (ENSNLEG00000000805) #30	ENSNLEG00000027828 #31	TMEM177 (ENSNLEG00000031534) #32	CFAP221 (ENSNLEG00000010316) #33	SCTR (ENSNLEG00000010307) #34	TMEM37 (ENSNLEG00000030043) #35
Cercopithecidae	ANCESTRAL SPECIES	13	ENSGT00940000153518.d.a #9	ENSGT01100000263537.b.a.a.b.a #10	ENSGT00940000166878	ENSGT00940000157247 #11	ENSGT00720000108834 #12	ENSGT00940000154505.B #13	ENSGT00910000147148	ENSGT00940000156884 #14	ENSGT00390000002204 #15	ENSGT00950000182905.a.b #16	ENSGT00950000182882.A.b.b #17	ENSGT01040000240573 #18	ENSGT00510000049102 #19	ENSGT00940000160532 #20	ENSGT00940000153568.B #21	ENSGT00390000011515.d #22	ENSGT00940000154817.b.b.b #23	ENSGT00940000159158 #24	ENSGT00940000159213 #25	ENSGT00910000147009	ENSGT00940000159862 #26	ENSGT00940000155984 #27	ENSGT00940000163000 #28	ENSGT00940000156332 #29	ENSGT00940000157211 #30	ENSGT00910000146971 #31	ENSGT00390000010354 #32	ENSGT00390000006925 #33	ENSGT00940000160618 #34	ENSGT00390000006225 #35	ENSGT00940000154846.b.k.a #36
Cercopithecinae	ANCESTRAL SPECIES	11	ENSGT00940000153518.d.a #9	ENSGT01100000263537.b.a.a.b.a #10	ENSGT00940000166878	ENSGT00940000157247 #11	ENSGT00720000108834 #12	ENSGT00940000154505.B #13	ENSGT00910000147148	ENSGT00940000156884 #14	ENSGT00390000002204 #15	ENSGT00950000182905.a.b #16	ENSGT00950000182882.A.b.b #17	ENSGT01040000240573 #18	ENSGT00510000049102 #19	ENSGT00940000160532 #20	ENSGT00940000153568.B #21	ENSGT00390000011515.d #22	ENSGT00940000154817.b.b.b #23	ENSGT00940000159158 #24	ENSGT00940000159213 #25	ENSGT00940000159862 #26	ENSGT00910000147009	ENSGT00940000155984 #27	ENSGT00940000163000 #28	ENSGT00940000156332 #29	ENSGT00940000157211 #30	ENSGT00910000146971 #31	ENSGT00390000010354 #32	ENSGT00390000006925 #33	ENSGT00940000160618 #34	ENSGT00390000006225 #35	ENSGT00940000154846.b.k.a.b #36
Vervet Monkey	MODERN SPECIES	1	POLR2D (ENSCSAG00000016861)	WDR33 (ENSCSAG00000016859) #7	SFT2D3 (ENSCSAG00000018638) #8	LIMS2 (ENSCSAG00000016853) #9	GPR17 (ENSCSAG00000016845) #10	IWS1 (ENSCSAG00000016842) #12	PROC (ENSCSAG00000016837) #13	MAP3K2 (ENSCSAG00000016832) #14	ERCC3 (ENSCSAG00000016827) #15	CYP27C1 (ENSCSAG00000016822) #16	BIN1 (ENSCSAG00000016816) #17	TEX51 (ENSCSAG00000016809) #18	GYPC (ENSCSAG00000016805) #19	CNTNAP5 (ENSCSAG00000016779) #20	TSN (ENSCSAG00000016712) #21	NIFK (ENSCSAG00000016704) #22	CLASP1 (ENSCSAG00000016694) #23	TFCP2L1 (ENSCSAG00000016679) #24	GLI2 (ENSCSAG00000016668) #25	INHBB (ENSCSAG00000016648) #26	RALB (ENSCSAG00000016644) #27	TMEM185B (ENSCSAG00000018639) #28	EPB41L5 (ENSCSAG00000016641) #29	PTPN4 (ENSCSAG00000016630) #30	TMEM177 (ENSCSAG00000018640) #32	CFAP221 (ENSCSAG00000016617) #33	SCTR (ENSCSAG00000016598) #34	TMEM37 (ENSCSAG00000018641) #35	ENSCSAG00000016572 ##36	C2orf76 (ENSCSAG00000016566) #37	STEAP3 (ENSCSAG00000016563)
Cercopithecinae_a	ANCESTRAL SPECIES	16	ENSGT00940000153518.d.a #9	ENSGT01100000263537.b.a.a.b.a #10	ENSGT00940000166878	ENSGT00940000157247 #11	ENSGT00720000108834 #12	ENSGT00940000154505.B #13	ENSGT00910000147148	ENSGT00940000156884 #14	ENSGT00390000002204 #15	ENSGT00950000182905.a.b #16	ENSGT00950000182882.A.b.b #17	ENSGT01040000240573 #18	ENSGT00510000049102 #19	ENSGT00940000160532 #20	ENSGT00940000153568.B #21	ENSGT00390000011515.d #22	ENSGT00940000154817.b.b.b #23	ENSGT00940000159158 #24	ENSGT00940000159213 #25	ENSGT00940000159862 #26	ENSGT00910000147009	ENSGT00940000155984 #27	ENSGT00940000163000 #28	ENSGT00940000156332 #29	ENSGT00940000157211 #30	ENSGT00910000146971 #31	ENSGT00390000010354 #32	ENSGT00390000006925 #33	ENSGT00940000160618 #34	ENSGT00390000006225 #35	ENSGT00940000154846.b.k.a.b #36
Macaca	ANCESTRAL SPECIES	15	ENSGT00730000111130 #7	ENSGT00940000153518.d.a #9	ENSGT01100000263537.b.a.a.b.a #10	ENSGT00940000166878	ENSGT00940000157247 #11	ENSGT00720000108834 #12	ENSGT00940000154505.B #13	ENSGT00940000156884 #14	ENSGT00390000002204 #15	ENSGT00950000182905.a.b #16	ENSGT00950000182882.A.b.b #17	ENSGT01040000240573 #18	ENSGT00510000049102 #19	ENSGT00940000160532 #20	ENSGT00940000153568.B #21	ENSGT00390000011515.d #22	ENSGT00940000154817.b.b.b #23	ENSGT00940000159158 #24	ENSGT00940000159213 #25	ENSGT00940000159862 #26	ENSGT00910000147009	ENSGT00940000155984 #27	ENSGT00940000163000 #28	ENSGT00940000156332 #29	ENSGT00940000157211 #30	ENSGT00910000146971 #31	ENSGT00390000010354 #32	ENSGT00390000006925 #33	ENSGT00940000160618 #34	ENSGT00390000006225 #35	ENSGT00940000154846.b.k.a.b #36
Pig-tailed macaque	MODERN SPECIES	192	WDR33 (ENSMNEG00000038503) #7	LIMS2 (ENSMNEG00000021913) #9	GPR17 (ENSMNEG00000042549) #10	MYO7B (ENSMNEG00000038391) #11	IWS1 (ENSMNEG00000030610) #12	PROC (ENSMNEG00000027654) #13	MAP3K2 (ENSMNEG00000039958) #14	ENSMNEG00000033856	ERCC3 (ENSMNEG00000004215) #15	CYP27C1 (ENSMNEG00000040999) #16	BIN1 (ENSMNEG00000024112) #17	TEX51 (ENSMNEG00000028172) #18	GYPC (ENSMNEG00000037096) #19	CNTNAP5 (ENSMNEG00000032687) #20	TSN (ENSMNEG00000040632) #21	NIFK (ENSMNEG00000035940) #22	CLASP1 (ENSMNEG00000043626) #23	TFCP2L1 (ENSMNEG00000041220) #24	GLI2 (ENSMNEG00000029215) #25	INHBB (ENSMNEG00000030332) #26	ENSMNEG00000041834	RALB (ENSMNEG00000042744) #27	TMEM185B (ENSMNEG00000003238) #28	EPB41L5 (ENSMNEG00000031588) #29	PTPN4 (ENSMNEG00000035285) #30	TMEM177 (ENSMNEG00000041079) #32	CFAP221 (ENSMNEG00000035728) #33	SCTR (ENSMNEG00000044503) #34	TMEM37 (ENSMNEG00000041781) #35	DBI (ENSMNEG00000028613) #36	C2orf76 (ENSMNEG00000005955) #37
Macaca_a	ANCESTRAL SPECIES	17	ENSGT00940000153518.d.a #9	ENSGT01100000263537.b.a.a.b.a #10	ENSGT00940000166878	ENSGT00940000157247 #11	ENSGT00720000108834 #12	ENSGT00940000154505.B #13	ENSGT01100000263539.b.b.b.b.b.a.b.a.b	ENSGT00940000156884 #14	ENSGT00390000002204 #15	ENSGT00950000182905.a.b #16	ENSGT00950000182882.A.b.b #17	ENSGT01040000240573 #18	ENSGT00510000049102 #19	ENSGT00940000160532 #20	ENSGT00940000153568.B #21	ENSGT00390000011515.d #22	ENSGT00940000154817.b.b.b #23	ENSGT00940000159158 #24	ENSGT00940000159213 #25	ENSGT00940000159862 #26	ENSGT00940000155984 #27	ENSGT00940000163000 #28	ENSGT00940000156332 #29	ENSGT00940000157211 #30	ENSGT00910000146971 #31	ENSGT00390000010354 #32	ENSGT00390000006925 #33	ENSGT00940000160618 #34	ENSGT00390000006225 #35	ENSGT00940000154846.b.k.a.b #36	ENSGT00390000015352 #37
Crab-eating macaque	MODERN SPECIES	3	GPR17 (ENSMFAG00000036834) #10	ENSMFAG00000031956	ENSMFAG00000062671 #11	IWS1 (ENSMFAG00000016975) #12	PROC (ENSMFAG00000044923) #13	ENSMFAG00000058484	ENSMFAG00000051897	MAP3K2 (ENSMFAG00000037837) #14	ERCC3 (ENSMFAG00000003370) #15	CYP27C1 (ENSMFAG00000041958) #16	BIN1 (ENSMFAG00000031946) #17	TEX51 (ENSMFAG00000000535) #18	ENSMFAG00000003980 #19	CNTNAP5 (ENSMFAG00000042003) #20	TSN (ENSMFAG00000044217) #21	NIFK (ENSMFAG00000031270) #22	CLASP1 (ENSMFAG00000032753) #23	ENSMFAG00000049923	TFCP2L1 (ENSMFAG00000013698) #24	GLI2 (ENSMFAG00000003477) #25	INHBB (ENSMFAG00000043042) #26	RALB (ENSMFAG00000038532) #27	ENSMFAG00000060262	TMEM185B (ENSMFAG00000016061) #28	EPB41L5 (ENSMFAG00000000388) #29	PTPN4 (ENSMFAG00000037071) #30	ENSMFAG00000044614 #31	TMEM177 (ENSMFAG00000049249) #32	CFAP221 (ENSMFAG00000026339) #33	SCTR (ENSMFAG00000003037) #34	ENSMFAG00000051758 ##36
Rhesus	MODERN SPECIES	3	MYO7B (ENSMMUG00000004177) #11	IWS1 (ENSMMUG00000002799) #12	PROC (ENSMMUG00000049035) #13	ENSMMUG00000056151	MAP3K2 (ENSMMUG00000018568) #14	ERCC3 (ENSMMUG00000064234) #15	CYP27C1 (ENSMMUG00000049635) #16	BIN1 (ENSMMUG00000000376) #17	TEX51 (ENSMMUG00000037719) #18	ENSMMUG00000064775	ENSMMUG00000055743	ENSMMUG00000057571	ENSMMUG00000059960	CNTNAP5 (ENSMMUG00000019739) #20	TSN (ENSMMUG00000021119) #21	NIFK (ENSMMUG00000020928) #22	CLASP1 (ENSMMUG00000007499) #23	TFCP2L1 (ENSMMUG00000008829) #24	ENSMMUG00000047258	GLI2 (ENSMMUG00000001868) #25	INHBB (ENSMMUG00000060196) #26	RALB (ENSMMUG00000046774) #27	TMEM185B (ENSMMUG00000063759) #28	ENSMMUG00000059504	ENSMMUG00000051751	EPB41L5 (ENSMMUG00000001244) #29	PTPN4 (ENSMMUG00000005610) #30	TMEM177 (ENSMMUG00000006446) #32	CFAP221 (ENSMMUG00000011129) #33	SCTR (ENSMMUG00000011128) #34	TMEM37 (ENSMMUG00000060725) #35
Cercopithecinae_b	ANCESTRAL SPECIES	10	ENSGT01100000263537.b.a.a.b.a #10	ENSGT00940000153518.d.a #9	ENSGT00940000157247 #11	ENSGT00720000108834 #12	ENSGT00940000154505.B #13	ENSGT00910000147148	ENSGT00940000156884 #14	ENSGT00390000002204 #15	ENSGT00950000182905.a.b #16	ENSGT00950000182882.A.b.b #17	ENSGT01040000240573 #18	ENSGT00510000049102 #19	ENSGT00940000160532 #20	ENSGT00940000164023	ENSGT00940000153568.B #21	ENSGT00390000011515.d #22	ENSGT00940000154817.b.b.b #23	ENSGT00940000159158 #24	ENSGT00940000159213 #25	ENSGT00940000159862 #26	ENSGT00910000147009	ENSGT00940000155984 #27	ENSGT00940000163000 #28	ENSGT00940000156332 #29	ENSGT00940000157211 #30	ENSGT00910000146971 #31	ENSGT00390000010354 #32	ENSGT00390000006925 #33	ENSGT00940000160618 #34	ENSGT00390000006225 #35	ENSGT00940000154846.b.k.a.b #36
Olive baboon	MODERN SPECIES	1	ERCC3 (ENSPANG00000007699) #15	CYP27C1 (ENSPANG00000022224) #16	ENSPANG00000038622	BIN1 (ENSPANG00000007659) #17	ENSPANG00000030790	TEX51 (ENSPANG00000009097) #18	GYPC (ENSPANG00000000867) #19	ENSPANG00000039144	ENSPANG00000046437	CNTNAP5 (ENSPANG00000010545) #20	ENSPANG00000047618	ENSPANG00000019515	ENSPANG00000040497	ENSPANG00000039774	TSN (ENSPANG00000000733) #21	NIFK (ENSPANG00000009239) #22	CLASP1 (ENSPANG00000006709) #23	TFCP2L1 (ENSPANG00000016702) #24	GLI2 (ENSPANG00000024168) #25	INHBB (ENSPANG00000041444) #26	ENSPANG00000030077	RALB (ENSPANG00000019898) #27	TMEM185B (ENSPANG00000038960) #28	EPB41L5 (ENSPANG00000022430) #29	PTPN4 (ENSPANG00000005006) #30	TMEM177 (ENSPANG00000048408) #32	CFAP221 (ENSPANG00000006516) #33	SCTR (ENSPANG00000012987) #34	TMEM37 (ENSPANG00000004964) #35	ENSPANG00000010073 #36	ENSPANG00000007242 #37
Cercopithecinae_d	ANCESTRAL SPECIES	149													ENSGT00940000160532 #20	ENSGT00940000164023	ENSGT00940000153568.B #21	ENSGT00390000011515.d #22	ENSGT00390000014818.g.b.a.b	ENSGT00940000153294.m.b.s.e.b	ENSGT00940000154817.b.b.b #23	ENSGT00940000159158 #24	ENSGT00940000159213 #25	ENSGT00940000159862 #26	ENSGT00910000147009	ENSGT00940000155984 #27	ENSGT00940000163000 #28	ENSGT00940000156332 #29	ENSGT00940000153095.g.b.a.a.a.a	ENSGT00940000157211 #30	ENSGT00910000146971 #31	ENSGT00390000010354 #32	ENSGT00390000006925 #33
Drill	MODERN SPECIES	871													CNTNAP5 (ENSMLEG00000030564) #20	ENSMLEG00000005825	TSN (ENSMLEG00000038656) #21	NIFK (ENSMLEG00000043516) #22	ENSMLEG00000017424	CLASP1 (ENSMLEG00000044177) #23	TFCP2L1 (ENSMLEG00000019949) #24	GLI2 (ENSMLEG00000000952) #25	ENSMLEG00000042162	RALB (ENSMLEG00000008823) #27	ENSMLEG00000027991 #28	EPB41L5 (ENSMLEG00000032344) #29	ENSMLEG00000039838	PTPN4 (ENSMLEG00000040178) #30	ENSMLEG00000041704 #32	CFAP221 (ENSMLEG00000042134) #33	SCTR (ENSMLEG00000029227) #34	TMEM37 (ENSMLEG00000033060) #35	DBI (ENSMLEG00000001896) #36
Sooty mangabey	MODERN SPECIES	129														ENSCATG00000032734	TSN (ENSCATG00000032155) #21	NIFK (ENSCATG00000015239) #22	ENSCATG00000043436	ENSCATG00000043420	CLASP1 (ENSCATG00000039063) #23	TFCP2L1 (ENSCATG00000044361) #24	GLI2 (ENSCATG00000034671) #25	INHBB (ENSCATG00000010576) #26	ENSCATG00000006617	RALB (ENSCATG00000039216) #27	ENSCATG00000036400 #28	EPB41L5 (ENSCATG00000040081) #29	ENSCATG00000035581	PTPN4 (ENSCATG00000030920) #30	ENSCATG00000012333 #31	ENSCATG00000014934 #32	CFAP221 (ENSCATG00000020702) #33
Rhinopithecus	ANCESTRAL SPECIES	224															ENSGT00940000153568.B #21	ENSGT00390000011515.d #22	ENSGT00940000154817.b.b.b #23	ENSGT00940000159158 #24	ENSGT00390000018086.o.b	ENSGT00940000159213 #25	ENSGT00910000147009	ENSGT00940000159862 #26	ENSGT00940000155984 #27	ENSGT00940000163000 #28	ENSGT00940000156332 #29	ENSGT00940000157211 #30	ENSGT00910000146971 #31	ENSGT00390000010354 #32	ENSGT00390000006925 #33	ENSGT00940000160618 #34	ENSGT00390000006225 #35
Golden snub-nosed monkey	MODERN SPECIES	1324														ENSRROG00000020625	TSN (ENSRROG00000029954) #21	NIFK (ENSRROG00000039485) #22	CLASP1 (ENSRROG00000041335) #23
Black snub-nosed monkey	MODERN SPECIES	1072															TSN (ENSRBIG00000041316) #21	NIFK (ENSRBIG00000035094) #22	CLASP1 (ENSRBIG00000041902) #23	TFCP2L1 (ENSRBIG00000035215) #24	ENSRBIG00000017477	GLI2 (ENSRBIG00000044751) #25	INHBB (ENSRBIG00000028632) #26	RALB (ENSRBIG00000037348) #27	ENSRBIG00000022562 #28	EPB41L5 (ENSRBIG00000028508) #29	PTPN4 (ENSRBIG00000038301) #30	ENSRBIG00000030836 #31	TMEM177 (ENSRBIG00000038177) #32	ENSRBIG00000023952	CFAP221 (ENSRBIG00000031866) #33	SCTR (ENSRBIG00000034380) #34	TMEM37 (ENSRBIG00000037444) #35
Platyrrhini	DUPLICATION
Platyrrhini	ANCESTRAL SPECIES	9	ENSGT00720000108834 #12	ENSGT00940000154474.C	ENSGT00910000147148	ENSGT00940000156884 #14	ENSGT00390000002204 #15	ENSGT00940000167401.b	ENSGT00950000182905.a.b #16	ENSGT00950000182882.A.b.b.a.a #17	ENSGT00950000182825.A.a.b.a.a	ENSGT00950000182825.A.a.b.a.b.a.a.b	ENSGT00950000182882.A.b.b.a.b #17	ENSGT01040000240573 #18	ENSGT00510000049102 #19	ENSGT00940000160532 #20	ENSGT00940000153568.B #21	ENSGT00390000011515.d.a #22	ENSGT00940000154817.b.b.b #23	ENSGT00940000159158 #24	ENSGT00390000000854.c.b.k.b.b.b	ENSGT00940000159213 #25	ENSGT00940000159862 #26	ENSGT00940000155984 #27	ENSGT00550000074972.f.a	ENSGT00940000163000 #28	ENSGT00940000156332 #29	ENSGT00940000157211 #30	ENSGT00550000074831.d	ENSGT00390000010354 #32	ENSGT00390000006925 #33	ENSGT00940000160618 #34	ENSGT00390000006225 #35
Cebidae	ANCESTRAL SPECIES	11												ENSGT01040000240573 #18	ENSGT00510000049102 #19	ENSGT00940000160532 #20	ENSGT00940000153568.B #21	ENSGT00390000011515.d.a #22	ENSGT00940000154817.b.b.b #23	ENSGT00940000159158 #24	ENSGT00390000000854.c.b.k.b.b.b	ENSGT00940000159213 #25	ENSGT00940000159862 #26	ENSGT00940000155984 #27	ENSGT00550000074972.f.a	ENSGT00940000163000 #28	ENSGT00940000156332 #29	ENSGT00940000157211 #30	ENSGT00550000074831.d	ENSGT00390000010354 #32	ENSGT00390000006925 #33	ENSGT00940000160618 #34	ENSGT00390000006225 #35
Marmoset	MODERN SPECIES	18	ENSCJAG00000072123	ENSCJAG00000082288	ENSCJAG00000084079	TMEFF2 (ENSCJAG00000003484)	CAVIN2 (ENSCJAG00000065456)	NABP1 (ENSCJAG00000082844)	MYO1B (ENSCJAG00000003380)	ENSCJAG00000064504	ENSCJAG00000015271	ENSCJAG00000083000 #17	ENSCJAG00000047222	TEX51 (ENSCJAG00000041118) #18	GYPC (ENSCJAG00000084616) #19	CNTNAP5 (ENSCJAG00000018447) #20	ENSCJAG00000071090 #21	NIFK (ENSCJAG00000013386) #22	ENSCJAG00000041121	ENSCJAG00000023039	ENSCJAG00000081768	CLASP1 (ENSCJAG00000013398) #23	ENSCJAG00000082293	TFCP2L1 (ENSCJAG00000013356) #24	GLI2 (ENSCJAG00000013342) #25	INHBB (ENSCJAG00000048402) #26	ENSCJAG00000074220	ENSCJAG00000013326 #27	TMEM185B (ENSCJAG00000004108) #28	EPB41L5 (ENSCJAG00000013283) #29	ENSCJAG00000082465	ENSCJAG00000073015	PTPN4 (ENSCJAG00000013214) #30
Cebidae_a	ANCESTRAL SPECIES	27											ENSGT01040000240573 #18	ENSGT00510000049102 #19	ENSGT00940000160532 #20	ENSGT00910000147318	ENSGT00940000153568.B #21	ENSGT00390000011515.d.a #22	ENSGT00940000154817.b.b.b #23	ENSGT00940000159158 #24	ENSGT00390000000854.c.b.k.b.b.b	ENSGT00940000159213 #25	ENSGT00940000159862 #26	ENSGT00940000155984.a #27	ENSGT00550000074972.f.a	ENSGT00940000163000 #28	ENSGT00940000156332 #29	ENSGT00940000157211 #30	ENSGT00550000074831.d	ENSGT00390000010354 #32	ENSGT00390000006925 #33	ENSGT00940000160618 #34	ENSGT00390000006225 #35
Bolivian squirrel monkey	MODERN SPECIES	87	ENSSBOG00000028881	ENSSBOG00000027864	MAP3K2 (ENSSBOG00000025709) #14	BIN1 (ENSSBOG00000035776) #17	CYP27C1 (ENSSBOG00000030349) #16	ENSSBOG00000033926	ENSSBOG00000031426	ERCC3 (ENSSBOG00000023079) #15	ENSSBOG00000032595	ENSSBOG00000015719 #21	TEX51 (ENSSBOG00000036266) #18	GYPC (ENSSBOG00000036265) #19	CNTNAP5 (ENSSBOG00000019984) #20	ENSSBOG00000030438	TSN (ENSSBOG00000028579) #21	NIFK (ENSSBOG00000033603) #22	CLASP1 (ENSSBOG00000035562) #23	TFCP2L1 (ENSSBOG00000032812) #24	ENSSBOG00000035033	GLI2 (ENSSBOG00000035626) #25	INHBB (ENSSBOG00000027565) #26	ENSSBOG00000025151	ENSSBOG00000032472 #27	ENSSBOG00000015265 #28	EPB41L5 (ENSSBOG00000032246) #29	PTPN4 (ENSSBOG00000026744) #30	ENSSBOG00000027599	ENSSBOG00000022754 #32	CFAP221 (ENSSBOG00000023657) #33	SCTR (ENSSBOG00000006054) #34	TMEM37 (ENSSBOG00000026372) #35
Capuchin	MODERN SPECIES	570																NIFK (ENSCCAG00000025869) #22	ENSCCAG00000026783	ENSCCAG00000028037	ENSCCAG00000023685	CLASP1 (ENSCCAG00000035114) #23	TFCP2L1 (ENSCCAG00000026803) #24	ENSCCAG00000023618	GLI2 (ENSCCAG00000023139) #25
Mas night monkey	MODERN SPECIES	1112				ENSANAG00000033175	SHOC2 (ENSANAG00000020390)	BBIP1 (ENSANAG00000030232)	PDCD4 (ENSANAG00000031719)	ENSANAG00000022490	RBM20 (ENSANAG00000033591)	SMC3 (ENSANAG00000034789)	DUSP5 (ENSANAG00000026860)	ENSANAG00000025072	SMNDC1 (ENSANAG00000032875)	ENSANAG00000025593	MXI1 (ENSANAG00000030766)	ENSANAG00000032684 #22	ADD3 (ENSANAG00000034278)	XPNPEP1 (ENSANAG00000022140)	SORCS1 (ENSANAG00000023100)	ENSANAG00000034346	SORCS3 (ENSANAG00000027085)
Platyrrhini	ANCESTRAL SPECIES																	ENSGT00390000011515.d.b #22
Mas night monkey	MODERN SPECIES	1247										CNTNAP5 (ENSANAG00000026645) #20	ENSANAG00000020285	ENSANAG00000020265	TSN (ENSANAG00000026842) #21	ENSANAG00000035241	ENSANAG00000030445	ENSANAG00000029859 #22	ENSANAG00000013823	ENSANAG00000009837	CLASP1 (ENSANAG00000025292) #23	TFCP2L1 (ENSANAG00000023303) #24	ENSANAG00000034754	GLI2 (ENSANAG00000034664) #25	INHBB (ENSANAG00000029843) #26	RALB (ENSANAG00000038113) #27	ENSANAG00000028366	ENSANAG00000021804 #28	EPB41L5 (ENSANAG00000021697) #29	PTPN4 (ENSANAG00000038024) #30	ENSANAG00000021459	ENSANAG00000037319 #32	CFAP221 (ENSANAG00000030979) #33
Simiiformes	ANCESTRAL SPECIES																	ENSGT00390000011515.c ##22
Catarrhini	DUPLICATION
Catarrhini	ANCESTRAL SPECIES																	ENSGT00390000011515.c.a ##22
Hominoidea	ANCESTRAL SPECIES																	ENSGT00390000011515.c.a ##22
Hominidae	ANCESTRAL SPECIES																	ENSGT00390000011515.c.a ##22
Homo/Pan/Gorilla group	ANCESTRAL SPECIES																	ENSGT00390000011515.c.a ##22
Homo/Pan group	ANCESTRAL SPECIES																	ENSGT00390000011515.c.a ##22
Pan	ANCESTRAL SPECIES	9	ENSGT00940000164046	ENSGT00940000163379	ENSGT00910000148209	ENSGT01020000230438.B.b.b.b.c.a	ENSGT01020000230438.B.b.b.b.c.b	ENSGT00390000010337.A	ENSGT00390000009010	ENSGT01080000257333.C.cb	ENSGT01080000257333.C.bb.a.a	ENSGT00940000163075	ENSGT01080000257333.A.a.b.a.b.b.b.c.a	ENSGT01080000257333.A.a.b.a.b.a.a.a.a.b	ENSGT01080000257333.A.a.b.a.b.a.a.a.b	ENSGT01080000257333.A.a.b.a.b.a.a.b	ENSGT01080000257333.A.a.a.j	ENSGT00390000011515.c.a ##22	ENSGT00660000097488	ENSGT01050000244814.a.a.b.b.b.a.a	ENSGT01050000244814.a.a.b.b.a.a	ENSGT01050000244814.a.a.b.b.a.b	ENSGT00390000009936	ENSGT00940000162314	ENSGT00940000160467.k	ENSGT01080000257333.A.b	ENSGT01080000257333.E.o.b	ENSGT01080000257333.A.a.b.a.b.b.b.c.b	ENSGT01080000257333.A.a.b.a.b.a.a.a.a.a.b	ENSGT01080000257333.A.a.b.a.b.a.a.a.a.a.a	ENSGT00390000001041	ENSGT01020000230389.b.a.b.d.a.b.b	ENSGT01030000234551.k.d.a.d.a.a.b
Bonobo	MODERN SPECIES	10	ZNF613 (ENSPPAG00000037723)	ZNF649 (ENSPPAG00000027177)	ZNF577 (ENSPPAG00000034514)	ENSPPAG00000030462	FPR3 (ENSPPAG00000005403)	FPR1 (ENSPPAG00000020189)	HAS1 (ENSPPAG00000037352)	SPACA6 (ENSPPAG00000042668)	ENSPPAG00000011216	ENSPPAG00000040369	ZNF175 (ENSPPAG00000034934)	SIGLEC12 (ENSPPAG00000011319)	SIGLEC8 (ENSPPAG00000038718)	ENSPPAG00000014762	SIGLEC10 (ENSPPAG00000029787)	ENSPPAG00000040912 ##22	C19orf84 (ENSPPAG00000039582)	ENSPPAG00000040823	NKG7 (ENSPPAG00000039157)	CLDND2 (ENSPPAG00000030259)	ENSPPAG00000036918	VSIG10L (ENSPPAG00000032024)	IGLON5 (ENSPPAG00000043534)	ENSPPAG00000033199	SIGLECL1 (ENSPPAG00000021100)	CD33 (ENSPPAG00000036503)	SIGLEC7 (ENSPPAG00000029509)	SIGLEC9 (ENSPPAG00000042703)	KLK14 (ENSPPAG00000042925)	KLK13 (ENSPPAG00000010784)	KLK12 (ENSPPAG00000038770)
Chimpanzee	MODERN SPECIES	10	ZNF649 (ENSPTRG00000023428)	ZNF577 (ENSPTRG00000011398)	ENSPTRG00000049866	FPR3 (ENSPTRG00000048751)	FPR1 (ENSPTRG00000011395)	HAS1 (ENSPTRG00000011394)	SPACA6 (ENSPTRG00000046520)	ENSPTRG00000050548	ENSPTRG00000011392	ZNF175 (ENSPTRG00000011389)	SIGLEC6 (ENSPTRG00000011388)	SIGLEC8 (ENSPTRG00000032469)	SIGLEC8 (ENSPTRG00000011384)	SIGLEC13 (ENSPTRG00000032470)	SIGLEC10 (ENSPTRG00000011383)	ENSPTRG00000049930 ##22	C19H19orf84 (ENSPTRG00000047981)	LIM2 (ENSPTRG00000011382)	NKG7 (ENSPTRG00000011381)	CLDND2 (ENSPTRG00000011380)	ETFB (ENSPTRG00000011379)	VSIG10L (ENSPTRG00000011378)	IGLON5 (ENSPTRG00000011377)	ENSPTRG00000028906	CD33 (ENSPTRG00000011375)	SIGLEC7 (ENSPTRG00000047753)	SIGLEC9 (ENSPTRG00000011374)	CTU1 (ENSPTRG00000011371)	KLK13 (ENSPTRG00000011370)	KLK12 (ENSPTRG00000011369)	KLK11 (ENSPTRG00000011368)
Gorilla	MODERN SPECIES	1	ENSGGOG00000022019	SFTPA1 (ENSGGOG00000022096)	ENSGGOG00000024380	ENSGGOG00000025726	RAB18 (ENSGGOG00000008086)	MKX (ENSGGOG00000016220)	ODAD2 (ENSGGOG00000014550)	MPP7 (ENSGGOG00000013306)	WAC (ENSGGOG00000005639)	BAMBI (ENSGGOG00000004600)	ENSGGOG00000000756	ENSGGOG00000026771	JCAD (ENSGGOG00000017151)	ENSGGOG00000009335	ENSGGOG00000043632	ENSGGOG00000025617 ##22	MAP3K8 (ENSGGOG00000005573)	ENSGGOG00000022362	ENSGGOG00000037717	ZNF438 (ENSGGOG00000002677)	ZEB1 (ENSGGOG00000010090)	ARHGAP12 (ENSGGOG00000012753)	KIF5B (ENSGGOG00000013417)	ENSGGOG00000040767	ENSGGOG00000043841	EPC1 (ENSGGOG00000008088)	ENSGGOG00000022296	CCDC7 (ENSGGOG00000004506)	ITGB1 (ENSGGOG00000006118)	NRP1 (ENSGGOG00000001496)	PARD3 (ENSGGOG00000005482)
Catarrhini	ANCESTRAL SPECIES																	ENSGT00390000011515.c.b ##22
Cercopithecidae	ANCESTRAL SPECIES	7	ENSGT00950000183119.a.e.b.n.b	ENSGT00940000156049	ENSGT00940000159628	ENSGT00940000155971	ENSGT00940000160781	ENSGT00940000161660	ENSGT00390000005224	ENSGT00390000016068	ENSGT00390000015400	ENSGT00940000155645	ENSGT00940000160936	ENSGT00950000182983.B.b	ENSGT00910000147443	ENSGT00910000147506	ENSGT00940000154146.a	ENSGT00390000011515.c.b ##22	ENSGT00940000161710	ENSGT00940000154740.a.a.d	ENSGT00390000015701	ENSGT00940000154470.b	ENSGT00390000015600.c.a.f.d	ENSGT00940000158357	ENSGT00940000158534.d	ENSGT00390000016025.b.g	ENSGT00940000156422	ENSGT00910000144587.a.b	ENSGT00390000006548.b.j.a.d	ENSGT00940000155524	ENSGT00940000156817	ENSGT00940000158441	ENSGT00510000046704.b.b
Cercopithecinae	ANCESTRAL SPECIES	2	ENSGT00950000183119.a.e.b.n.b	ENSGT00940000156049	ENSGT00940000159628	ENSGT00940000155971	ENSGT00940000160781	ENSGT00940000161660	ENSGT00390000005224	ENSGT00390000016068	ENSGT00390000015400	ENSGT00940000155645	ENSGT00940000160936	ENSGT00950000182983.B.b	ENSGT00910000147443	ENSGT00910000147506	ENSGT00940000154146.a	ENSGT00390000011515.c.b ##22	ENSGT00940000161710	ENSGT00940000154740.a.a.d	ENSGT00390000015701	ENSGT00940000154470.b	ENSGT00390000015600.c.a.f.d	ENSGT00940000158357	ENSGT00940000158534.d	ENSGT00390000016025.b.g	ENSGT00940000156422	ENSGT00910000144587.a.b	ENSGT00390000006548.b.j.a.d	ENSGT00940000155524	ENSGT00940000156817	ENSGT00940000158441	ENSGT00510000046704.b.b
Vervet Monkey	MODERN SPECIES	21	ABHD2 (ENSCSAG00000017178)	MFGE8 (ENSCSAG00000017181)	HAPLN3 (ENSCSAG00000017182)	ENSCSAG00000017184	ENSCSAG00000017186	ISG20 (ENSCSAG00000017194)	AEN (ENSCSAG00000017196)	DET1 (ENSCSAG00000017198)	MRPS11 (ENSCSAG00000017199)	MRPL46 (ENSCSAG00000017201)	NTRK3 (ENSCSAG00000017205)	AGBL1 (ENSCSAG00000017210)	KLHL25 (ENSCSAG00000000368)	ENSCSAG00000000369	AKAP13 (ENSCSAG00000017226)	ENSCSAG00000017231 ##22	ZSCAN2 (ENSCSAG00000017237)	WDR73 (ENSCSAG00000017238)	NMB (ENSCSAG00000017240)	SEC11A (ENSCSAG00000017241)	ZNF592 (ENSCSAG00000017243)	ALPK3 (ENSCSAG00000017246)	SLC28A1 (ENSCSAG00000017257)	PDE8A (ENSCSAG00000017271)	ENSCSAG00000017277	ENSCSAG00000017280	CPEB1 (ENSCSAG00000017282)	AP3B2 (ENSCSAG00000017286)	FSD2 (ENSCSAG00000017289)	WHAMM (ENSCSAG00000017293)	HOMER2 (ENSCSAG00000017295)
Hominoidea	DUPLICATION
Hominoidea	ANCESTRAL SPECIES	28	ENSGT01080000257410.A.f	ENSGT00950000182940.b.a.a	ENSGT00940000156813	ENSGT00390000009453	ENSGT00940000162149	ENSGT00940000159320	ENSGT00390000011608	ENSGT01030000234638.b.b.c.a	ENSGT00940000158881	ENSGT00940000157220	ENSGT00940000156800	ENSGT00390000010652.C	ENSGT00950000183076.a.b.b.a.a	ENSGT00940000163116	ENSGT00940000156876.k.b	ENSGT00390000011515.c.b.a ##22	ENSGT00530000063484.a.d	ENSGT00390000014472	ENSGT00940000161367	ENSGT00390000016718	ENSGT00940000158927	ENSGT00910000148745	ENSGT00940000154870.D	ENSGT00390000012547.a	ENSGT00940000161170	ENSGT00530000064251	ENSGT00970000193421.C.b	ENSGT00940000154876.b	ENSGT00530000063712.a.a.k	ENSGT00530000063712.a.a.l	ENSGT00390000009995
Hominidae	ANCESTRAL SPECIES	27	ENSGT01080000257410.A.f	ENSGT00950000182940.b.a.a	ENSGT00940000156813	ENSGT00390000009453	ENSGT00940000162149	ENSGT00940000159320	ENSGT00390000011608	ENSGT01030000234638.b.b.c.a	ENSGT00940000158881	ENSGT00940000157220	ENSGT00940000156800	ENSGT00390000010652.C	ENSGT00950000183076.a.b.b.a.a	ENSGT00940000163116	ENSGT00940000156876.k.b	ENSGT00390000011515.c.b.a ##22	ENSGT00530000063484.a.d	ENSGT00390000014472	ENSGT00940000161367	ENSGT00390000016718	ENSGT00940000158927	ENSGT00910000148745	ENSGT00940000154870.D	ENSGT00390000012547.a	ENSGT00940000161170	ENSGT00530000064251	ENSGT00970000193421.C.b	ENSGT00940000154876.b	ENSGT00530000063712.a.a.k	ENSGT00530000063712.a.a.l	ENSGT00390000009995
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	30	ENSGT00950000182940.b.a.a	ENSGT00940000156813	ENSGT00390000009453	ENSGT00940000162149	ENSGT00940000159320	ENSGT00390000011608	ENSGT01030000234638.b.b.c.a	ENSGT00940000158881	ENSGT00940000157220	ENSGT00940000156800	ENSGT00390000010652.C	ENSGT00950000183076.a.b.b.a.a	ENSGT00940000163116	ENSGT00940000156876.k.b	ENSGT00530000062932.c.a.a.a.a.a.b.b	ENSGT00390000011515.c.b.a ##22	ENSGT00530000063484.a.d	ENSGT00390000014472	ENSGT00940000161367	ENSGT00390000016718	ENSGT00940000158927	ENSGT00910000148745	ENSGT00940000154870.D	ENSGT00390000012547.a	ENSGT00940000161170	ENSGT00530000064251	ENSGT00970000193421.C.b	ENSGT00940000154876.b	ENSGT00530000063712.a.a.k	ENSGT00530000063712.a.a.l	ENSGT00390000009995
Homo/Pan group	ANCESTRAL SPECIES	29	ENSGT00950000182940.b.a.a	ENSGT00940000156813	ENSGT00390000009453	ENSGT00940000162149	ENSGT00940000159320	ENSGT00390000011608	ENSGT01030000234638.b.b.c.a	ENSGT00940000158881	ENSGT00940000157220	ENSGT00940000156800	ENSGT00390000010652.C	ENSGT00950000183076.a.b.b.a.a	ENSGT00940000163116	ENSGT00940000156876.k.b	ENSGT00530000062932.c.a.a.a.a.a.b.b	ENSGT00390000011515.c.b.a ##22	ENSGT00530000063484.a.d	ENSGT00390000014472	ENSGT00940000161367	ENSGT00390000016718	ENSGT00940000158927	ENSGT00390000018318.u.b.a.b.a.a.b	ENSGT00940000154870.D	ENSGT00390000012547.a	ENSGT00940000161170	ENSGT00530000064251	ENSGT00970000193421.C.b	ENSGT00940000154876.b	ENSGT00530000063712.a.a.k	ENSGT00530000063712.a.a.l	ENSGT00390000009995
Pan	ANCESTRAL SPECIES	34	ENSGT00950000182940.b.a.a	ENSGT00940000156813	ENSGT00390000009453	ENSGT00940000162149	ENSGT00940000159320	ENSGT00390000011608	ENSGT01030000234638.b.b.c.a	ENSGT00940000158881	ENSGT00940000157220	ENSGT00940000156800	ENSGT00390000010652.C	ENSGT00950000183076.a.b.b.a.a	ENSGT00940000163116	ENSGT00940000156876.k.b	ENSGT00530000062932.c.a.a.a.a.a.b.b	ENSGT00390000011515.c.b.a ##22	ENSGT00530000063484.a.d	ENSGT00390000014472	ENSGT00940000161367	ENSGT00390000016718	ENSGT00940000158927	ENSGT00940000154870.D	ENSGT00390000012547.a	ENSGT00940000161170	ENSGT00530000064251	ENSGT00940000154876.b	ENSGT00530000063712.a.a.k	ENSGT00530000063712.a.a.l	ENSGT00390000009995	ENSGT00390000014273.a	ENSGT00950000182920.a
Bonobo	MODERN SPECIES	6	VPS33B (ENSPPAG00000001343)	PRC1 (ENSPPAG00000033888)	RCCD1 (ENSPPAG00000041396)	ENSPPAG00000039645	UNC45A (ENSPPAG00000038005)	ENSPPAG00000029551	MAN2A2 (ENSPPAG00000030909)	FES (ENSPPAG00000035301)	FURIN (ENSPPAG00000034430)	BLM (ENSPPAG00000032173)	CRTC3 (ENSPPAG00000035032)	IQGAP1 (ENSPPAG00000039618)	ZNF774 (ENSPPAG00000028939)	ENSPPAG00000005940	ENSPPAG00000030356	ENSPPAG00000033086 ##22	ENSPPAG00000040877	NGRN (ENSPPAG00000037382)	TTLL13 (ENSPPAG00000025237)	GDPGP1 (ENSPPAG00000003278)	ENSPPAG00000043374	ENSPPAG00000043011	SEMA4B (ENSPPAG00000038630)	IDH2 (ENSPPAG00000032500)	ZNF710 (ENSPPAG00000043381)	ENSPPAG00000040525	ANPEP (ENSPPAG00000009804)	ENSPPAG00000037533	MESP1 (ENSPPAG00000030355)	WDR93 (ENSPPAG00000042043)	PEX11A (ENSPPAG00000037244)
Chimpanzee	MODERN SPECIES	6	SLCO3A1 (ENSPTRG00000007471)	SV2B (ENSPTRG00000007469)	VPS33B (ENSPTRG00000007468)	PRC1 (ENSPTRG00000007467)	RCCD1 (ENSPTRG00000007466)	HDDC3 (ENSPTRG00000007464)	UNC45A (ENSPTRG00000007465)	MAN2A2 (ENSPTRG00000007463)	FES (ENSPTRG00000007462)	FURIN (ENSPTRG00000007461)	BLM (ENSPTRG00000007460)	CRTC3 (ENSPTRG00000007457)	IQGAP1 (ENSPTRG00000007455)	ZNF774 (ENSPTRG00000023856)	ENSPTRG00000040709	ENSPTRG00000043623 ##22	ENSPTRG00000018646	NGRN (ENSPTRG00000034472)	TTLL13 (ENSPTRG00000007451)	GDPGP1 (ENSPTRG00000023568)	CIB1 (ENSPTRG00000007449)	SEMA4B (ENSPTRG00000007448)	IDH2 (ENSPTRG00000007446)	ZNF710 (ENSPTRG00000007445)	ARPIN (ENSPTRG00000007442)	ENSPTRG00000007441	MESP2 (ENSPTRG00000007440)	MESP1 (ENSPTRG00000007439)	WDR93 (ENSPTRG00000007438)	PEX11A (ENSPTRG00000007437)	PLIN1 (ENSPTRG00000007436)
Gibbon	MODERN SPECIES	21	ST8SIA2 (ENSNLEG00000012340)	ENSNLEG00000033581	SV2B (ENSNLEG00000012315)	VPS33B (ENSNLEG00000012278)	PRC1 (ENSNLEG00000012258)	RCCD1 (ENSNLEG00000012251)	ENSNLEG00000034968	UNC45A (ENSNLEG00000012220)	MAN2A2 (ENSNLEG00000012209)	FES (ENSNLEG00000012157)	FURIN (ENSNLEG00000012144)	BLM (ENSNLEG00000012087)	CRTC3 (ENSNLEG00000033347)	IQGAP1 (ENSNLEG00000012014)	ZNF774 (ENSNLEG00000012010)	ENSNLEG00000028987 ##22	ENSNLEG00000030916	NGRN (ENSNLEG00000012007)	TTLL13 (ENSNLEG00000011994)	GDPGP1 (ENSNLEG00000018884)	CIB1 (ENSNLEG00000011967)	ENSNLEG00000031172	SEMA4B (ENSNLEG00000011930)	IDH2 (ENSNLEG00000011819)	ZNF710 (ENSNLEG00000011807)	ENSNLEG00000032838	ANPEP (ENSNLEG00000011767)	MESP2 (ENSNLEG00000011765)	ENSNLEG00000011763	WDR93 (ENSNLEG00000011758)	PEX11A (ENSNLEG00000027966)
Hominoidea	ANCESTRAL SPECIES																	ENSGT00390000011515.c.b.b ##22
Hominidae	ANCESTRAL SPECIES	27	ENSGT00940000154799.rb.b	ENSGT00950000182902.b.a	ENSGT00950000183119.a.e.b.n.b	ENSGT00940000156049	ENSGT00940000159628	ENSGT00940000155971	ENSGT00940000160781	ENSGT00940000161660	ENSGT00390000005224	ENSGT00390000016068	ENSGT00390000015400	ENSGT00940000155645	ENSGT00940000160936	ENSGT00950000182983.B.b	ENSGT00940000154146.a	ENSGT00390000011515.c.b.b ##22	ENSGT00940000161710	ENSGT00940000154740.a.a.d	ENSGT00390000015701	ENSGT00940000154470.b	ENSGT00390000015600.c.a.f.c.a	ENSGT00940000158357	ENSGT00940000158534.d	ENSGT00390000016025.b.g	ENSGT00940000156422	ENSGT00910000144587	ENSGT00390000007252.d.a.a	ENSGT00550000074806.jb.b	ENSGT00390000006548.b.k.mb.a.a.a.b	ENSGT00940000155524	ENSGT00940000156817
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	30	ENSGT00940000154799.rb.b	ENSGT00950000182902.b.a	ENSGT00950000183119.a.e.b.n.b	ENSGT00940000156049	ENSGT00940000159628	ENSGT00940000155971	ENSGT00940000160781	ENSGT00940000161660	ENSGT00390000005224	ENSGT00390000016068	ENSGT00390000015400	ENSGT00940000155645	ENSGT00940000160936	ENSGT00950000182983.B.b	ENSGT00940000154146.a	ENSGT00390000011515.c.b.b ##22	ENSGT00940000156422	ENSGT00390000016025.b.g	ENSGT00940000158534.d	ENSGT00940000158357	ENSGT00390000015600.c.a.f.c.a	ENSGT00940000154470.b	ENSGT00390000015701	ENSGT00940000154740.a.a.d	ENSGT00940000161710
Gorilla	MODERN SPECIES	6	ENSGGOG00000025704	ABHD2 (ENSGGOG00000011681)	ENSGGOG00000036502	MFGE8 (ENSGGOG00000014551)	HAPLN3 (ENSGGOG00000005272)	ACAN (ENSGGOG00000005262)	ISG20 (ENSGGOG00000010365)	AEN (ENSGGOG00000010180)	DET1 (ENSGGOG00000015157)	MRPS11 (ENSGGOG00000015152)	MRPL46 (ENSGGOG00000015148)	NTRK3 (ENSGGOG00000010222)	AGBL1 (ENSGGOG00000034983)	KLHL25 (ENSGGOG00000010730)	AKAP13 (ENSGGOG00000000774)	ENSGGOG00000041210 ##22	PDE8A (ENSGGOG00000014523)	SLC28A1 (ENSGGOG00000009389)	ALPK3 (ENSGGOG00000009380)	ZNF592 (ENSGGOG00000009373)	ENSGGOG00000011129	NMB (ENSGGOG00000014633)	WDR73 (ENSGGOG00000014625)	ENSGGOG00000044133	ZSCAN2 (ENSGGOG00000014609)	ENSGGOG00000042764	ENSGGOG00000008894	ENSGGOG00000012325	ADAMTSL3 (ENSGGOG00000012200)	SH3GL3 (ENSGGOG00000000478)	BNC1 (ENSGGOG00000006610)
Homo/Pan group	ANCESTRAL SPECIES	29	ENSGT00940000154799.rb.b	ENSGT00950000182902.b.a	ENSGT00950000183119.a.e.b.n.b	ENSGT00940000156049	ENSGT00940000159628	ENSGT00940000155971	ENSGT00940000160781	ENSGT00940000161660	ENSGT00390000005224	ENSGT00390000016068	ENSGT00390000015400	ENSGT00940000155645	ENSGT00940000160936	ENSGT00950000182983.B.b	ENSGT00940000154146.a	ENSGT00390000011515.c.b.b ##22	ENSGT00940000156422	ENSGT00390000016025.b.g	ENSGT00940000158534.d	ENSGT00940000158357	ENSGT00390000015600.c.a.f.c.a	ENSGT00940000154470.b	ENSGT00390000015701	ENSGT00940000154740.a.a.d	ENSGT00940000161710
Pan	ANCESTRAL SPECIES	34	ENSGT00940000154799.rb.b	ENSGT00950000182902.b.a	ENSGT00950000183119.a.e.b.n.b	ENSGT00940000156049	ENSGT00940000159628	ENSGT00940000155971	ENSGT00940000160781	ENSGT00940000161660	ENSGT00390000005224	ENSGT00390000016068	ENSGT00390000015400	ENSGT00940000155645	ENSGT00940000160936	ENSGT00950000182983.B.b	ENSGT00940000154146.a	ENSGT00390000011515.c.b.b ##22	ENSGT00940000156422	ENSGT00390000016025.b.g	ENSGT00940000158534.d	ENSGT00940000158357	ENSGT00390000015600.c.a.f.c.a	ENSGT00940000154470.b	ENSGT00390000015701	ENSGT00940000154740.a.a.d	ENSGT00940000161710
Bonobo	MODERN SPECIES	6	ABHD2 (ENSPPAG00000043154)	ENSPPAG00000033380	MFGE8 (ENSPPAG00000027594)	HAPLN3 (ENSPPAG00000035615)	ACAN (ENSPPAG00000038878)	ISG20 (ENSPPAG00000028868)	AEN (ENSPPAG00000039598)	ENSPPAG00000012515	DET1 (ENSPPAG00000042560)	MRPS11 (ENSPPAG00000028073)	MRPL46 (ENSPPAG00000040630)	NTRK3 (ENSPPAG00000042420)	AGBL1 (ENSPPAG00000037816)	KLHL25 (ENSPPAG00000024283)	AKAP13 (ENSPPAG00000039683)	ENSPPAG00000028694 ##22	PDE8A (ENSPPAG00000043724)	SLC28A1 (ENSPPAG00000038512)	ENSPPAG00000036550	ZNF592 (ENSPPAG00000037402)	ENSPPAG00000040737	ENSPPAG00000027246	WDR73 (ENSPPAG00000037416)	ENSPPAG00000007219	ZSCAN2 (ENSPPAG00000027143)	ENSPPAG00000033982	MEX3B (ENSPPAG00000020407)	ENSPPAG00000039672	ENSPPAG00000035324	ADAMTSL3 (ENSPPAG00000036039)	SH3GL3 (ENSPPAG00000006912)
Tarsier	MODERN SPECIES	6742															TSN (ENSTSYG00000004395) #21	NIFK (ENSTSYG00000001411) #22	ENSTSYG00000037213	CLASP1 (ENSTSYG00000008285) #23
Strepsirrhini	ANCESTRAL SPECIES	10	ENSGT00730000111130 #7	ENSGT00390000018525.b #8	ENSGT00940000153518.d.a #9	ENSGT01100000263537.b.a.a.b.a #10	ENSGT00940000157247 #11	ENSGT00720000108834 #12	ENSGT00940000154474.C	ENSGT00940000156884 #14	ENSGT00390000002204 #15	ENSGT00950000182905.a.b #16	ENSGT00950000182882.A.b.b #17	ENSGT01040000240573 #18	ENSGT00510000049102 #19	ENSGT00940000160532 #20	ENSGT00940000153568.B #21	ENSGT00390000011515 #22	ENSGT00940000154817.b.b.b #23	ENSGT00940000159158 #24	ENSGT00940000159213 #25	ENSGT00940000159862 #26	ENSGT00940000155984 #27	ENSGT00940000163000 #28	ENSGT00940000156332 #29	ENSGT00940000157211 #30	ENSGT00390000010354 #32	ENSGT00390000006925 #33	ENSGT00940000160618 #34	ENSGT00390000006225 #35	ENSGT00940000154846.b #36	ENSGT00390000015352 #37	ENSGT00390000008042.A.b
Lemuriformes	ANCESTRAL SPECIES	5	ENSGT00390000018525.b #8	ENSGT01100000263537.b.a.a.b.a #10	ENSGT00940000153518.d.a #9	ENSGT00940000157247 #11	ENSGT00720000108834 #12	ENSGT00940000154505.B #13	ENSGT00940000154474.C	ENSGT00940000156884 #14	ENSGT00390000002204 #15	ENSGT00950000182905.a.b #16	ENSGT00950000182882.A.b.b #17	ENSGT01040000240573 #18	ENSGT00510000049102 #19	ENSGT00940000160532 #20	ENSGT00940000153568.B #21	ENSGT00390000011515 #22	ENSGT00940000154817.b.b.b #23	ENSGT00940000159158 #24	ENSGT00940000159213 #25	ENSGT00940000159862 #26	ENSGT00940000155984 #27	ENSGT00940000163000 #28	ENSGT00940000156332 #29	ENSGT00940000157211 #30	ENSGT00390000010354 #32	ENSGT00390000006925 #33	ENSGT00940000160618 #34	ENSGT00390000006225 #35	ENSGT00940000154846.b.j #36	ENSGT00390000015352 #37	ENSGT00390000008042.A.b
Lemuriformes_a	ANCESTRAL SPECIES	171															ENSGT00940000153568.B #21	ENSGT00390000011515 #22	ENSGT00940000154817.b.b.b #23	ENSGT00940000159158 #24	ENSGT00940000159213 #25	ENSGT00940000159862 #26	ENSGT00940000155984 #27	ENSGT00940000163000 #28	ENSGT00940000156332 #29	ENSGT00940000157211 #30	ENSGT00390000010354 #32	ENSGT00390000006925 #33	ENSGT00940000160618 #34	ENSGT00390000006225 #35	ENSGT00940000154846.b.j #36	ENSGT00390000015352 #37	ENSGT00390000008042.A.b
Coquerels sifaka	MODERN SPECIES	316															TSN (ENSPCOG00000011045) #21	NIFK (ENSPCOG00000023378) #22	CLASP1 (ENSPCOG00000021595) #23	TFCP2L1 (ENSPCOG00000018978) #24	GLI2 (ENSPCOG00000015304) #25	INHBB (ENSPCOG00000018863) #26	RALB (ENSPCOG00000027317) #27	ENSPCOG00000021737 #28	EPB41L5 (ENSPCOG00000018944) #29	PTPN4 (ENSPCOG00000018249) #30	ENSPCOG00000018625 #32	CFAP221 (ENSPCOG00000023409) #33	SCTR (ENSPCOG00000014550) #34	TMEM37 (ENSPCOG00000021830) #35	ENSPCOG00000023484 #36	C2orf76 (ENSPCOG00000024285) #37	STEAP3 (ENSPCOG00000025504)
Greater bamboo lemur	MODERN SPECIES	381															TSN (ENSPSMG00000016511) #21	NIFK (ENSPSMG00000016470) #22	ENSPSMG00000016453	CLASP1 (ENSPSMG00000016057) #23	TFCP2L1 (ENSPSMG00000015106) #24
Mouse lemur	MODERN SPECIES	30	LIMS2 (ENSMICG00000017200) #9	ENSMICG00000032495	MYO7B (ENSMICG00000002875) #11	ENSMICG00000030599	IWS1 (ENSMICG00000009948) #12	ENSMICG00000047595	MAP3K2 (ENSMICG00000009592) #14	ERCC3 (ENSMICG00000009578) #15	BIN1 (ENSMICG00000005344) #17	TEX51 (ENSMICG00000045414) #18	ENSMICG00000044430 #19	ENSMICG00000033871	ENSMICG00000036385	CNTNAP5 (ENSMICG00000013119) #20	TSN (ENSMICG00000015793) #21	NIFK (ENSMICG00000037600) #22	CLASP1 (ENSMICG00000007186) #23	TFCP2L1 (ENSMICG00000007161) #24	ENSMICG00000032165	ENSMICG00000033908	GLI2 (ENSMICG00000008885) #25	INHBB (ENSMICG00000047510) #26	RALB (ENSMICG00000012197) #27	ENSMICG00000042089 #28	ENSMICG00000009529	EPB41L5 (ENSMICG00000000936) #29	PTPN4 (ENSMICG00000046058) #30	ENSMICG00000017224 #32	ENSMICG00000034038	ENSMICG00000011011	CFAP221 (ENSMICG00000017212) #33
Bushbaby	MODERN SPECIES	174											ENSOGAG00000031860	ENSOGAG00000030519	CNTNAP5 (ENSOGAG00000011053) #20	ENSOGAG00000026855	TSN (ENSOGAG00000030436) #21	NIFK (ENSOGAG00000016968) #22	CLASP1 (ENSOGAG00000015062) #23	TFCP2L1 (ENSOGAG00000012031) #24	GLI2 (ENSOGAG00000032438) #25	INHBB (ENSOGAG00000031714) #26	RALB (ENSOGAG00000015936) #27	TMEM185B (ENSOGAG00000007439) #28	EPB41L5 (ENSOGAG00000007435) #29	PTPN4 (ENSOGAG00000007431) #30	ENSOGAG00000026207	ENSOGAG00000034783	TMEM177 (ENSOGAG00000028409) #32	CFAP221 (ENSOGAG00000014557) #33	SCTR (ENSOGAG00000000593) #34	TMEM37 (ENSOGAG00000034872) #35	C2orf76 (ENSOGAG00000008647) #37
Euarchontoglires_A	ANCESTRAL SPECIES	13	ENSGT00730000111130 #7	ENSGT00390000018525.b #8	ENSGT00940000153518.d.a #9	ENSGT01100000263537.b.a.a.b.a #10	ENSGT00940000157247 #11	ENSGT00720000108834 #12	ENSGT00940000154505.B #13	ENSGT00940000156884 #14	ENSGT00390000002204 #15	ENSGT00950000182905.a.b #16	ENSGT00950000182882.A.b.b #17	ENSGT01040000240573 #18	ENSGT00510000049102 #19	ENSGT00940000160532 #20	ENSGT00940000153568.B #21	ENSGT00390000011515 #22	ENSGT00940000154817.b.b.b #23	ENSGT00940000159158 #24	ENSGT00940000159213 #25	ENSGT00910000148632	ENSGT00940000159862 #26	ENSGT00940000155984 #27	ENSGT00940000163000 #28	ENSGT00940000156332 #29	ENSGT00940000157211 #30	ENSGT00390000010354 #32	ENSGT00390000006925 #33	ENSGT00940000165152	ENSGT00940000160618 #34	ENSGT00390000006225 #35	ENSGT00940000154846.b #36
Glires	ANCESTRAL SPECIES	14	ENSGT00730000111130 #7	ENSGT00390000018525.b #8	ENSGT00940000153518.d.a #9	ENSGT01100000263537.b.a.a.b.a #10	ENSGT00940000157247 #11	ENSGT00720000108834 #12	ENSGT00940000154505.B #13	ENSGT00940000156884 #14	ENSGT00390000002204 #15	ENSGT00950000182905.a.b #16	ENSGT00950000182882.A.b.b #17	ENSGT01040000240573 #18	ENSGT00510000049102 #19	ENSGT00940000160532 #20	ENSGT00940000153568.B #21	ENSGT00390000011515 #22	ENSGT00940000154817.b.b.b #23	ENSGT00940000159158 #24	ENSGT00940000159213 #25	ENSGT00910000148632	ENSGT00940000159862 #26	ENSGT00940000155984 #27	ENSGT00940000163000 #28	ENSGT00940000156332 #29	ENSGT00940000157211 #30	ENSGT00390000010354 #32	ENSGT00390000006925 #33	ENSGT00940000165152	ENSGT00940000160618 #34	ENSGT00390000006225 #35	ENSGT00940000154846.b #36
Rodentia	ANCESTRAL SPECIES	14	ENSGT00730000111130 #7	ENSGT00390000018525.b #8	ENSGT00940000153518.d.a #9	ENSGT01100000263537.b.a.a.b.a #10	ENSGT00940000157247 #11	ENSGT00720000108834 #12	ENSGT00940000154505.B #13	ENSGT00940000156884 #14	ENSGT00390000002204 #15	ENSGT00950000182905.a.b #16	ENSGT00950000182882.A.b.b #17	ENSGT01040000240573 #18	ENSGT00510000049102 #19	ENSGT00940000160532 #20	ENSGT00940000153568.B #21	ENSGT00390000011515 #22	ENSGT00940000154817.b.b.b #23	ENSGT00940000159158 #24	ENSGT00940000159213 #25	ENSGT00910000148632	ENSGT00940000159862 #26	ENSGT00940000155984 #27	ENSGT00940000163000 #28	ENSGT00940000156332 #29	ENSGT00940000157211 #30	ENSGT00390000010354 #32	ENSGT00390000006925 #33	ENSGT00940000165152	ENSGT00940000160618 #34	ENSGT00390000006225 #35	ENSGT00940000154846.b #36
Rodentia_B	ANCESTRAL SPECIES	41	ENSGT00390000004912	ENSGT00730000111130 #7	ENSGT00390000018525.b #8	ENSGT00940000153518.d.a #9	ENSGT01100000263537.b.a.a.b.a #10	ENSGT00940000157247 #11	ENSGT00720000108834 #12	ENSGT00940000154505.B #13	ENSGT00940000156884 #14	ENSGT00390000002204 #15	ENSGT00950000182882.A.b.b #17	ENSGT01040000240573 #18	ENSGT00510000049102 #19	ENSGT00940000164023	ENSGT00940000153568.B #21	ENSGT00390000011515 #22	ENSGT00940000154817.b.b.b #23	ENSGT00940000159158 #24	ENSGT00940000159213 #25	ENSGT00940000159862 #26	ENSGT00940000155984 #27	ENSGT00940000163000 #28	ENSGT00940000156332 #29	ENSGT00940000157211 #30	ENSGT00390000010354 #32	ENSGT00390000006925 #33	ENSGT00940000160618 #34	ENSGT00390000006225 #35	ENSGT00940000154846.b #36	ENSGT00390000015352 #37	ENSGT00390000008042.A.b
Myomorpha	ANCESTRAL SPECIES	54														ENSGT00940000164023	ENSGT00940000153568.B #21	ENSGT00390000011515 #22	ENSGT00940000154817.b.b.b #23	ENSGT00940000159158 #24	ENSGT00940000159213 #25	ENSGT00940000159862 #26	ENSGT00940000155984 #27	ENSGT00940000163000 #28	ENSGT00940000156332 #29	ENSGT00940000157211 #30	ENSGT00390000010354 #32	ENSGT00390000006925 #33	ENSGT00940000160618 #34	ENSGT00390000006225 #35	ENSGT00940000154846.b #36	ENSGT00390000015352 #37	ENSGT00390000008042.A.b
Muroidea	ANCESTRAL SPECIES	64														ENSGT00940000164023	ENSGT00940000153568.B #21	ENSGT00390000011515 #22	ENSGT00940000154817.b.b.b #23	ENSGT00940000159158 #24	ENSGT00940000159213 #25	ENSGT00940000159862 #26	ENSGT00940000155984 #27	ENSGT00940000163000 #28	ENSGT00940000156332 #29	ENSGT00940000157211 #30	ENSGT00390000010354 #32	ENSGT00390000006925 #33	ENSGT00940000160618 #34	ENSGT00390000006225 #35	ENSGT00940000154846.b #36	ENSGT00390000015352 #37	ENSGT00390000008042.A.b
Muroidea_A	ANCESTRAL SPECIES	12	ENSGT00940000162214	ENSGT00940000161829	ENSGT00940000160674	ENSGT00940000154973	ENSGT00940000156961	ENSGT01090000260003.a.b.b.a.a.b.a	ENSGT00940000158137.c.a	ENSGT00520000055637.A.a	ENSGT00940000161211	ENSGT00390000004385	ENSGT00390000017600	ENSGT00730000111317	ENSGT00940000158167	ENSGT00940000164023	ENSGT00940000153568.B #21	ENSGT00390000011515 #22	ENSGT00940000154817.b.b.b #23	ENSGT00940000159158 #24	ENSGT00940000159213 #25	ENSGT00940000159862 #26	ENSGT00940000155984 #27	ENSGT00940000163000 #28	ENSGT00940000156332 #29	ENSGT00940000157211 #30	ENSGT00390000010354 #32	ENSGT00390000006925 #33	ENSGT00940000160618 #34	ENSGT00390000006225 #35	ENSGT00940000154846.b #36	ENSGT00390000015352 #37	ENSGT00390000008042.A.b
Cricetidae	ANCESTRAL SPECIES	13	ENSGT00940000162214	ENSGT00940000161829	ENSGT00940000160674	ENSGT00940000154973	ENSGT00940000156961	ENSGT01090000260003.a.b.b.a.a.b.a	ENSGT00940000158137.c.a	ENSGT00520000055637.A.a	ENSGT00940000161211	ENSGT00390000004385	ENSGT00390000017600	ENSGT00730000111317	ENSGT00940000158167	ENSGT00940000164023	ENSGT00940000153568.B #21	ENSGT00390000011515 #22	ENSGT00940000154817.b.b.b #23	ENSGT00940000159158 #24	ENSGT00940000159213 #25	ENSGT00940000159862 #26	ENSGT00940000155984 #27	ENSGT00940000163000 #28	ENSGT00940000156332 #29	ENSGT00940000157211 #30	ENSGT00390000010354 #32	ENSGT00390000006925 #33	ENSGT00940000160618 #34	ENSGT00390000006225 #35	ENSGT00940000154846.b #36	ENSGT00390000015352 #37	ENSGT00390000008042.A.b
Cricetidae_B	ANCESTRAL SPECIES	8	ENSGT00940000162214	ENSGT00940000161829	ENSGT00940000160674	ENSGT00940000154973	ENSGT00940000156961	ENSGT01090000260003.a.b.b.a.a.b.a	ENSGT00940000158137.c.a	ENSGT00520000055637.A.a	ENSGT00940000161211	ENSGT00390000004385	ENSGT00390000017600	ENSGT00730000111317	ENSGT00940000158167	ENSGT00940000164023	ENSGT00940000153568.B #21	ENSGT00390000011515 #22	ENSGT00940000154817.b.b.b #23	ENSGT00940000159158 #24	ENSGT00940000159213 #25	ENSGT00940000159862 #26	ENSGT00940000155984 #27	ENSGT00940000163000 #28	ENSGT00940000156332 #29	ENSGT00940000157211 #30	ENSGT00390000010354 #32	ENSGT00390000006925 #33	ENSGT00940000160618 #34	ENSGT00390000006225 #35	ENSGT00940000154846.b #36	ENSGT00390000015352 #37	ENSGT00390000008042.A.b
Northern American deer mouse	MODERN SPECIES	2	Tmem37 (ENSPEMG00000022811) #35	Sctr (ENSPEMG00000012122) #34	Cfap221 (ENSPEMG00000013124) #33	Tmem177 (ENSPEMG00000010461) #32	Ptpn4 (ENSPEMG00000016685) #30	Epb41l5 (ENSPEMG00000023844) #29	Tmem185b (ENSPEMG00000006946) #28	Ralb (ENSPEMG00000030915) #27	Inhbb (ENSPEMG00000029287) #26	Gli2 (ENSPEMG00000005696) #25	Tfcp2l1 (ENSPEMG00000006693) #24	Clasp1 (ENSPEMG00000001550) #23	ENSPEMG00000011134	ENSPEMG00000028884	Tsn (ENSPEMG00000027108) #21	Nifk (ENSPEMG00000023356) #22	ENSPEMG00000030618	ENSPEMG00000027032	ENSPEMG00000028525	ENSPEMG00000030045	Dsel (ENSPEMG00000019394)	ENSPEMG00000027925	Cdh19 (ENSPEMG00000023161)	ENSPEMG00000005004	ENSPEMG00000001863	ENSPEMG00000027954	Cdh7 (ENSPEMG00000011724)	ENSPEMG00000026890	ENSPEMG00000025253	ENSPEMG00000007977	ENSPEMG00000011900
Prairie vole	MODERN SPECIES	14	Bcl2 (ENSMOCG00000015172)	Phlpp1 (ENSMOCG00000011825)	Zcchc2 (ENSMOCG00000021627)	Tnfrsf11a (ENSMOCG00000001050)	Relch (ENSMOCG00000015326)	Pign (ENSMOCG00000011826)	Rnf152 (ENSMOCG00000020478)	Cdh20 (ENSMOCG00000014345)	ENSMOCG00000001250	ENSMOCG00000010740	ENSMOCG00000000633	ENSMOCG00000019760	ENSMOCG00000010878	ENSMOCG00000018277	Tsn (ENSMOCG00000013248) #21	Nifk (ENSMOCG00000001962) #22	Clasp1 (ENSMOCG00000004583) #23	Tfcp2l1 (ENSMOCG00000016470) #24	Gli2 (ENSMOCG00000015946) #25	Inhbb (ENSMOCG00000023014) #26	Ralb (ENSMOCG00000014139) #27	Epb41l5 (ENSMOCG00000014769) #29	Ptpn4 (ENSMOCG00000019512) #30	Tmem177 (ENSMOCG00000020308) #32	Cfap221 (ENSMOCG00000019701) #33	Sctr (ENSMOCG00000002265) #34	Tmem37 (ENSMOCG00000008468) #35	Dbi (ENSMOCG00000020761) #36	ENSMOCG00000009556 #37	Steap3 (ENSMOCG00000008386)	C1ql2 (ENSMOCG00000015563)
Cricetinae	ANCESTRAL SPECIES	4	ENSGT00940000154520	ENSGT00940000162214	ENSGT00940000161829	ENSGT00940000160674	ENSGT00940000154973	ENSGT00940000156961	ENSGT01090000260003.a.b.b.a.a.b.a	ENSGT00940000158137.c.a	ENSGT00520000055637.A.a	ENSGT00940000161211	ENSGT00390000004385	ENSGT00390000017600	ENSGT00730000111317	ENSGT00940000158167	ENSGT00940000153568.B #21	ENSGT00390000011515 #22	ENSGT00940000154817.b.b.b #23	ENSGT00940000159158 #24	ENSGT00940000159213 #25	ENSGT00940000159862 #26	ENSGT00940000155984 #27	ENSGT00940000163000 #28	ENSGT00940000156332 #29	ENSGT00940000157211 #30	ENSGT00390000010354 #32	ENSGT00390000006925 #33	ENSGT00940000160618 #34	ENSGT00390000006225 #35	ENSGT00940000154846.b.m #36	ENSGT00390000015352 #37	ENSGT00390000008042.A.b
Chinese hamster chok1gshd	MODERN SPECIES	2	ENSCGRG00001017700	Kdsr (ENSCGRG00001003536)	BCL2 (ENSCGRG00001024362)	Phlpp1 (ENSCGRG00001019420)	Zcchc2 (ENSCGRG00001022059)	Tnfrsf11a (ENSCGRG00001018680)	Relch (ENSCGRG00001016605)	Pign (ENSCGRG00001013700)	Rnf152 (ENSCGRG00001008692)	Cdh20 (ENSCGRG00001022413)	ENSCGRG00001021112	ENSCGRG00001007230	ENSCGRG00001022226	ENSCGRG00001007738	TSN (ENSCGRG00001018233) #21	Nifk (ENSCGRG00001016466) #22	Clasp1 (ENSCGRG00001010650) #23	Tfcp2l1 (ENSCGRG00001009789) #24	ENSCGRG00001003252	Gli2 (ENSCGRG00001023112) #25	Inhbb (ENSCGRG00001021419) #26	Ralb (ENSCGRG00001018860) #27	Tmem185b (ENSCGRG00001005950) #28	Epb41l5 (ENSCGRG00001018059) #29	Ptpn4 (ENSCGRG00001004410) #30	Tmem177 (ENSCGRG00001004033) #32	Cfap221 (ENSCGRG00001022638) #33	Sctr (ENSCGRG00001005944) #34	Tmem37 (ENSCGRG00001002385) #35	ENSCGRG00001016035 #36	ENSCGRG00001013961 #37
Golden Hamster	MODERN SPECIES	638													ENSMAUG00000012036	Tsn (ENSMAUG00000018800) #21	ENSMAUG00000009750	Nifk (ENSMAUG00000021255) #22	Clasp1 (ENSMAUG00000021682) #23	Tfcp2l1 (ENSMAUG00000012650) #24	Gli2 (ENSMAUG00000008873) #25	Inhbb (ENSMAUG00000018944) #26	ENSMAUG00000016481 #29	Ptpn4 (ENSMAUG00000003161) #30	Cfap221 (ENSMAUG00000008913) #33	ENSMAUG00000009794	Sctr (ENSMAUG00000018939) #34	Tmem37 (ENSMAUG00000003894) #35	ENSMAUG00000012614 #36	ENSMAUG00000010977 #37	Steap3 (ENSMAUG00000012847)	C1ql2 (ENSMAUG00000001451)	Marco (ENSMAUG00000001107)
Murinae	ANCESTRAL SPECIES	11	ENSGT00940000156961	ENSGT00940000154973	ENSGT00940000160674	ENSGT00940000161829	ENSGT00940000162214	ENSGT00940000154520	ENSGT00940000161560	ENSGT00940000161520	ENSGT00940000161637	ENSGT00940000161205	ENSGT00940000154835.C	ENSGT00940000157031	ENSGT00940000160137	ENSGT00390000006522.a	ENSGT00940000153568.B #21	ENSGT00390000011515 #22	ENSGT00940000154817.b.b.b #23	ENSGT00940000159158 #24	ENSGT00940000159213 #25	ENSGT00940000159862 #26	ENSGT00940000155984 #27	ENSGT00940000163000 #28	ENSGT00940000156332 #29	ENSGT00940000157211 #30	ENSGT00390000010354 #32	ENSGT00390000006925 #33	ENSGT00940000160618 #34	ENSGT00390000006225 #35	ENSGT00940000154846.b #36	ENSGT00390000015352 #37	ENSGT00390000008042.A.b
Mus	ANCESTRAL SPECIES	5	ENSGT00940000156961	ENSGT00940000154973	ENSGT00940000160674	ENSGT00940000161829	ENSGT00940000162214	ENSGT00940000154520.db.a	ENSGT00940000161560	ENSGT00940000161520	ENSGT00940000161637	ENSGT00940000161205	ENSGT00940000154835.C	ENSGT00940000157031	ENSGT00940000160137	ENSGT00390000006522.a	ENSGT00940000153568.B #21	ENSGT00390000011515 #22	ENSGT00940000154817.b.b.b #23	ENSGT00940000159158 #24	ENSGT00940000159213 #25	ENSGT00940000159862 #26	ENSGT00940000155984 #27	ENSGT00940000163000 #28	ENSGT00940000156332 #29	ENSGT00940000157211 #30	ENSGT00390000010354 #32	ENSGT00390000006925 #33	ENSGT00940000160618 #34	ENSGT00390000006225 #35	ENSGT00940000154846.b #36	ENSGT00390000015352 #37	ENSGT00390000008042.A.b
Mus_A	DUPLICATION
Mus_A	ANCESTRAL SPECIES	5	ENSGT00940000154973	ENSGT00940000160674	ENSGT00940000161829	ENSGT00940000162214	ENSGT00940000154520.db.a.a.a	ENSGT00940000154520.db.a.a.b.a.a	ENSGT00940000161560	ENSGT00940000161520	ENSGT00940000161637	ENSGT00940000161205	ENSGT00940000154835.C	ENSGT00940000157031	ENSGT00940000160137	ENSGT00390000006522.a	ENSGT00940000153568.B #21	ENSGT00390000011515.e #22	ENSGT00940000154817.b.b.b #23	ENSGT00940000159158 #24	ENSGT00940000159213 #25	ENSGT00940000159862 #26	ENSGT00940000155984 #27	ENSGT00940000163000 #28	ENSGT00940000156332 #29	ENSGT00940000157211 #30	ENSGT00390000010354 #32	ENSGT00390000006925 #33	ENSGT00940000160618 #34	ENSGT00390000006225 #35	ENSGT00940000154846.b #36	ENSGT00390000015352 #37	ENSGT00390000008042.A.b
Mus_B	ANCESTRAL SPECIES	7	ENSGT00940000161829	ENSGT00940000162214	ENSGT00940000154520.db.a.b	ENSGT00940000154520.db.a.a.b.b	ENSGT00940000161560	ENSGT00940000161520	ENSGT00940000161637	ENSGT00940000161205	ENSGT00940000154835.C	ENSGT00940000157031	ENSGT00940000160137	ENSGT00390000006522.a	ENSGT00940000164023.d	ENSGT00940000166101.b.b.b	ENSGT00940000153568.B #21	ENSGT00390000011515.e #22	ENSGT00940000154817.b.b.b #23	ENSGT00940000159158 #24	ENSGT00940000159213 #25	ENSGT00940000159862 #26	ENSGT00940000155984 #27	ENSGT00940000163000 #28	ENSGT00940000156332 #29	ENSGT00940000157211 #30	ENSGT00390000010354 #32	ENSGT00390000006925 #33	ENSGT00940000160618 #34	ENSGT00390000006225 #35	ENSGT00940000154846.b #36	ENSGT00390000015352 #37	ENSGT00390000008042.A.b
Mus_C	ANCESTRAL SPECIES	1	ENSGT00940000161829	ENSGT00940000162214	ENSGT00940000154520.db.a.b	ENSGT00940000154520.db.a.a.b.b	ENSGT00940000161560	ENSGT00940000161520	ENSGT00940000161637	ENSGT00940000161205	ENSGT00940000154835.C	ENSGT00940000157031	ENSGT00940000160137	ENSGT00390000006522.a	ENSGT00940000164023.d	ENSGT00940000166101.b.b.b	ENSGT00940000153568.B #21	ENSGT00390000011515.e #22	ENSGT00940000154817.b.b.b #23	ENSGT00940000159158 #24	ENSGT00940000159213 #25	ENSGT00940000159862 #26	ENSGT00940000155984 #27	ENSGT00940000163000 #28	ENSGT00940000156332 #29	ENSGT00940000157211 #30	ENSGT00390000010354 #32	ENSGT00390000006925 #33	ENSGT00940000160618 #34	ENSGT00390000006225 #35	ENSGT00940000154846.b #36	ENSGT00390000015352 #37	ENSGT00390000008042.A.b
spretus	MODERN SPECIES		MGP_SPRETEiJ_G0015300	MGP_SPRETEiJ_G0015301	MGP_SPRETEiJ_G0015302	Serpinb11 (MGP_SPRETEiJ_G0015303)	Serpinb7 (MGP_SPRETEiJ_G0015304)	Serpinb2 (MGP_SPRETEiJ_G0015305)	MGP_SPRETEiJ_G0009400	MGP_SPRETEiJ_G0015306	Serpinb8 (MGP_SPRETEiJ_G0015307)	Cdh7 (MGP_SPRETEiJ_G0015308)	Cdh19 (MGP_SPRETEiJ_G0015309)	Dsel (MGP_SPRETEiJ_G0015310)	MGP_SPRETEiJ_G0015311	Cntnap5a (MGP_SPRETEiJ_G0015312)	Tsn (MGP_SPRETEiJ_G0015313) #21	Nifk (MGP_SPRETEiJ_G0015314) #22	Clasp1 (MGP_SPRETEiJ_G0015315) #23	Tfcp2l1 (MGP_SPRETEiJ_G0015316) #24	Gli2 (MGP_SPRETEiJ_G0015317) #25	Inhbb (MGP_SPRETEiJ_G0015318) #26	Ralb (MGP_SPRETEiJ_G0015319) #27	Tmem185b (MGP_SPRETEiJ_G0015320) #28	Epb41l5 (MGP_SPRETEiJ_G0015321) #29	Ptpn4 (MGP_SPRETEiJ_G0015322) #30	Tmem177 (MGP_SPRETEiJ_G0015323) #32	Cfap221 (MGP_SPRETEiJ_G0015324) #33	Sctr (MGP_SPRETEiJ_G0015325) #34	Tmem37 (MGP_SPRETEiJ_G0015326) #35	Dbi (MGP_SPRETEiJ_G0015327) #36	MGP_SPRETEiJ_G0015328 #37	Steap3 (MGP_SPRETEiJ_G0015329)
Steppe mouse	MODERN SPECIES	3366															Tsn (ENSMSIG00000024138) #21	Nifk (ENSMSIG00000024121) #22	Clasp1 (ENSMSIG00000009093) #23	Tfcp2l1 (ENSMSIG00000008871) #24	Gli2 (ENSMSIG00000008829) #25	ENSMSIG00000008818	Inhbb (ENSMSIG00000008806) #26	ENSMSIG00000008800	Ralb (ENSMSIG00000008787) #27	Tmem185b (ENSMSIG00000008782) #28	Epb41l5 (ENSMSIG00000008644) #29	Ptpn4 (ENSMSIG00000008276) #30	Tmem177 (ENSMSIG00000008258) #32	Cfap221 (ENSMSIG00000008192) #33	Sctr (ENSMSIG00000008107) #34	Tmem37 (ENSMSIG00000008095) #35	ENSMSIG00000008032 #36
Mouse	MODERN SPECIES		Serpinb3c (ENSMUSG00000073601)	Serpinb11 (ENSMUSG00000026327)	Serpinb7 (ENSMUSG00000067001)	Serpinb2 (ENSMUSG00000062345)	Serpinb10 (ENSMUSG00000092572)	Serpinb8 (ENSMUSG00000026315)	Cdh7 (ENSMUSG00000026312)	Cdh19 (ENSMUSG00000047216)	Dsel (ENSMUSG00000038702)	Cntnap5a (ENSMUSG00000070695)	Gm19965 (ENSMUSG00000094429)	B020011L13Rik (ENSMUSG00000101303)	Gm7145 (ENSMUSG00000100617)	Gm29106 (ENSMUSG00000102030)	Tsn (ENSMUSG00000026374) #21	Nifk (ENSMUSG00000026377) #22	Clasp1 (ENSMUSG00000064302) #23	Tfcp2l1 (ENSMUSG00000026380) #24	Gli2 (ENSMUSG00000048402) #25	Inhbb (ENSMUSG00000037035) #26	Ralb (ENSMUSG00000004451) #27	Tmem185b (ENSMUSG00000098923) #28	Epb41l5 (ENSMUSG00000026383) #29	Ptpn4 (ENSMUSG00000026384) #30	Tmem177 (ENSMUSG00000036975) #32	Cfap221 (ENSMUSG00000036962) #33	Sctr (ENSMUSG00000026387) #34	Tmem37 (ENSMUSG00000050777) #35	Dbi (ENSMUSG00000026385) #36	3110009E18Rik (ENSMUSG00000026388)	Steap3 (ENSMUSG00000026389)
Ryukyu mouse	MODERN SPECIES		Serpinb13 (MGP_CAROLIEiJ_G0014493)	MGP_CAROLIEiJ_G0014494	MGP_CAROLIEiJ_G0014495	MGP_CAROLIEiJ_G0014496	Serpinb11 (MGP_CAROLIEiJ_G0014497)	Serpinb7 (MGP_CAROLIEiJ_G0014498)	Serpinb2 (MGP_CAROLIEiJ_G0014499)	MGP_CAROLIEiJ_G0008940	MGP_CAROLIEiJ_G0014500	MGP_CAROLIEiJ_G0014501	Cdh7 (MGP_CAROLIEiJ_G0014502)	Cdh19 (MGP_CAROLIEiJ_G0014503)	Dsel (MGP_CAROLIEiJ_G0014504)	Cntnap5a (MGP_CAROLIEiJ_G0014505)	Tsn (MGP_CAROLIEiJ_G0014506) #21	Nifk (MGP_CAROLIEiJ_G0014507) #22	Clasp1 (MGP_CAROLIEiJ_G0014508) #23	Tfcp2l1 (MGP_CAROLIEiJ_G0014509) #24	Gli2 (MGP_CAROLIEiJ_G0014510) #25	Inhbb (MGP_CAROLIEiJ_G0014511) #26	Ralb (MGP_CAROLIEiJ_G0014512) #27	Tmem185b (MGP_CAROLIEiJ_G0014513) #28	Epb41l5 (MGP_CAROLIEiJ_G0014514) #29	Ptpn4 (MGP_CAROLIEiJ_G0014515) #30	Tmem177 (MGP_CAROLIEiJ_G0014516) #32	Cfap221 (MGP_CAROLIEiJ_G0014517) #33	MGP_CAROLIEiJ_G0014518 #34	Tmem37 (MGP_CAROLIEiJ_G0014519) #35	MGP_CAROLIEiJ_G0014520 #36	MGP_CAROLIEiJ_G0014521 #37	Steap3 (MGP_CAROLIEiJ_G0014522)
Mus_A	ANCESTRAL SPECIES																	ENSGT00390000011515.f #22
Mus_B	ANCESTRAL SPECIES																	ENSGT00390000011515.f #22
Mus_C	ANCESTRAL SPECIES																	ENSGT00390000011515.f #22
Steppe mouse	MODERN SPECIES	2862	Mpeg1 (ENSMSIG00000015415)	Dtx4 (ENSMSIG00000015421)	ENSMSIG00000015442	Fam111a (ENSMSIG00000015449)	Gm4952 (ENSMSIG00000015459)	Glyat (ENSMSIG00000015477)	Or5b94 (ENSMSIG00000015501)	Or5b95 (ENSMSIG00000015510)	Keg1 (ENSMSIG00000015519)	Cntf (ENSMSIG00000015547)	Zfp91 (ENSMSIG00000015554)	Lpxn (ENSMSIG00000015616)	Gm5244 (ENSMSIG00000015630)	Or5b21 (ENSMSIG00000015640)	Or5b12b (ENSMSIG00000015650)	ENSMSIG00000015654 #22	Or5b96 (ENSMSIG00000015669)	Or5b97 (ENSMSIG00000015685)	Or5b12 (ENSMSIG00000015701)	Or5b24 (ENSMSIG00000015716)	Or5b98 (ENSMSIG00000015729)	Or5b99 (ENSMSIG00000015749)	Or5b101 (ENSMSIG00000015759)	Or5b102 (ENSMSIG00000015770)	Or5b104 (ENSMSIG00000015776)	Or5b105 (ENSMSIG00000015788)	Or5b106 (ENSMSIG00000015798)	Or5b108 (ENSMSIG00000015813)	Or5b109 (ENSMSIG00000015825)	ENSMSIG00000015855	Or5b112 (ENSMSIG00000015859)
Shrew mouse	MODERN SPECIES	18	MGP_PahariEiJ_G0027728	MGP_PahariEiJ_G0027729	MGP_PahariEiJ_G0027730	MGP_PahariEiJ_G0027731	Serpinb11 (MGP_PahariEiJ_G0027732)	Serpinb7 (MGP_PahariEiJ_G0027733)	Serpinb2 (MGP_PahariEiJ_G0027734)	MGP_PahariEiJ_G0008428	MGP_PahariEiJ_G0027735	Serpinb8 (MGP_PahariEiJ_G0027736)	MGP_PahariEiJ_G0027737	Cdh19 (MGP_PahariEiJ_G0027738)	Dsel (MGP_PahariEiJ_G0027739)	MGP_PahariEiJ_G0027740	Tsn (MGP_PahariEiJ_G0027742) #21	Nifk (MGP_PahariEiJ_G0027743) #22	Clasp1 (MGP_PahariEiJ_G0027744) #23	Tfcp2l1 (MGP_PahariEiJ_G0027745) #24	Gli2 (MGP_PahariEiJ_G0027746) #25	Inhbb (MGP_PahariEiJ_G0027747) #26	Ralb (MGP_PahariEiJ_G0027748) #27	Tmem185b (MGP_PahariEiJ_G0027749) #28	Epb41l5 (MGP_PahariEiJ_G0027750) #29	Ptpn4 (MGP_PahariEiJ_G0027751) #30	Tmem177 (MGP_PahariEiJ_G0027752) #32	Cfap221 (MGP_PahariEiJ_G0027753) #33	MGP_PahariEiJ_G0027754 #34	Tmem37 (MGP_PahariEiJ_G0027755) #35	Dbi (MGP_PahariEiJ_G0027756) #36	MGP_PahariEiJ_G0027757 #37	Steap3 (MGP_PahariEiJ_G0027758)
Rat	MODERN SPECIES	4	Serpinb3 (ENSRNOG00000070387)	Serpinb11 (ENSRNOG00000002583)	Serpinb7 (ENSRNOG00000002555)	Serpinb2 (ENSRNOG00000002460)	Serpinb10 (ENSRNOG00000002417)	Serpinb8 (ENSRNOG00000002396)	RGD1560523 (ENSRNOG00000028513)	LOC108348870 (ENSRNOG00000029410)	ENSRNOG00000063241	Cdh7 (ENSRNOG00000032490)	Cdh19 (ENSRNOG00000029841)	LOC120096235 (ENSRNOG00000070646)	ENSRNOG00000069109	ENSRNOG00000070301	Tsn (ENSRNOG00000002319) #21	Nifk (ENSRNOG00000025701) #22	Clasp1 (ENSRNOG00000002376) #23	Tfcp2l1 (ENSRNOG00000002414) #24	Gli2 (ENSRNOG00000007261)	ENSRNOG00000070618	Inhbb (ENSRNOG00000060237) #26	Ralb (ENSRNOG00000002440) #27	Tmem185b (ENSRNOG00000067956) #28	Epb41l5 (ENSRNOG00000002538) #29	Ptpn4 (ENSRNOG00000002625) #30	Tmem177 (ENSRNOG00000025484) #32	Cfap221 (ENSRNOG00000056781) #33	Sctr (ENSRNOG00000049766) #34	Tmem37 (ENSRNOG00000047714) #35	Dbi (ENSRNOG00000046889) #36	C13h2orf76 (ENSRNOG00000045570) #37
Upper Galilee mountains blind mole rat	MODERN SPECIES	734														ENSNGAG00000007361	Tsn (ENSNGAG00000010353) #21	Nifk (ENSNGAG00000014831) #22	Clasp1 (ENSNGAG00000012260) #23	Tfcp2l1 (ENSNGAG00000008600) #24	Gli2 (ENSNGAG00000012764) #25	Inhbb (ENSNGAG00000004269) #26	Ralb (ENSNGAG00000008242) #27	Tmem185b (ENSNGAG00000003942) #28	Epb41l5 (ENSNGAG00000013984) #29	Ptpn4 (ENSNGAG00000007875) #30
Lesser Egyptian jerboa	MODERN SPECIES	72	Enkur (ENSJJAG00000017061)	ENSJJAG00000018530	Arhgap21 (ENSJJAG00000011661)	Etl4 (ENSJJAG00000019527)	ENSJJAG00000010796	ENSJJAG00000018392	Otud1 (ENSJJAG00000001123)	ENSJJAG00000018286	ENSJJAG00000012725	Gypc (ENSJJAG00000021602) #19	ENSJJAG00000014995	ENSJJAG00000004790	ENSJJAG00000022119	ENSJJAG00000015608	Tsn (ENSJJAG00000006730) #21	Nifk (ENSJJAG00000008547) #22	Clasp1 (ENSJJAG00000021160) #23	Tfcp2l1 (ENSJJAG00000011525) #24	Gli2 (ENSJJAG00000019457) #25	Inhbb (ENSJJAG00000013673) #26	Ralb (ENSJJAG00000017455) #27	ENSJJAG00000024011 #29	ENSJJAG00000009765	Ptpn4 (ENSJJAG00000000961) #30	Tmem177 (ENSJJAG00000009602) #32	Cfap221 (ENSJJAG00000019558) #33	Sctr (ENSJJAG00000012095) #34	Tmem37 (ENSJJAG00000021074) #35	Dbi (ENSJJAG00000015822) #36	ENSJJAG00000013605 #37	Steap3 (ENSJJAG00000016586)
Rodentia_A	ANCESTRAL SPECIES	13	ENSGT00730000111130 #7	ENSGT00390000018525.b #8	ENSGT00940000153518.d.a #9	ENSGT01100000263537.b.a.a.b.a #10	ENSGT00940000157247 #11	ENSGT00720000108834 #12	ENSGT00940000154505.B #13	ENSGT00940000156884 #14	ENSGT00390000002204 #15	ENSGT00950000182905.a.b #16	ENSGT00950000182882.A.b.b #17	ENSGT01040000240573 #18	ENSGT00510000049102 #19	ENSGT00940000160532 #20	ENSGT00940000153568.B #21	ENSGT00390000011515 #22	ENSGT00940000154817.b.b.b #23	ENSGT00940000159158 #24	ENSGT00940000159213 #25	ENSGT00910000148632	ENSGT00940000159862 #26	ENSGT00940000155984 #27	ENSGT00940000163000 #28	ENSGT00940000156332 #29	ENSGT00940000157211 #30	ENSGT00390000010354 #32	ENSGT00390000006925 #33	ENSGT00940000165152	ENSGT00940000160618 #34	ENSGT00390000006225 #35	ENSGT00940000154846.b #36
Hystricomorpha	ANCESTRAL SPECIES	20	ENSGT00390000010397.b.f	ENSGT00390000004912	ENSGT00730000111130.b #7	ENSGT00390000018525.b #8	ENSGT00940000153518.d.a #9	ENSGT01100000263537.b.a.a.b.a #10	ENSGT00940000157247 #11	ENSGT00720000108834 #12	ENSGT00940000154505.B #13	ENSGT00940000156884 #14	ENSGT00390000002204 #15	ENSGT00950000182882.A.b.b #17	ENSGT00510000049102 #19	ENSGT00940000160532 #20	ENSGT00940000153568.B #21	ENSGT00390000011515 #22	ENSGT00940000154817.b.b.b #23	ENSGT00940000159158 #24	ENSGT00940000159213 #25	ENSGT00940000159862 #26	ENSGT00940000155984 #27	ENSGT00940000163000 #28	ENSGT00940000156332.d.b #29	ENSGT00940000157211 #30	ENSGT00390000010354 #32	ENSGT00390000006925 #33	ENSGT00940000160618 #34	ENSGT00390000006225 #35	ENSGT00940000154846.b #36	ENSGT00390000015352 #37	ENSGT00390000008042.A.b
Hystricomorpha_a	ANCESTRAL SPECIES	17	ENSGT00440000037733.d	ENSGT00390000010397.b.f	ENSGT00390000004912	ENSGT00730000111130.b #7	ENSGT00940000153518.d.a #9	ENSGT01100000263537.b.a.a.b.a #10	ENSGT00940000157247 #11	ENSGT00720000108834 #12	ENSGT00940000154505.B #13	ENSGT00940000156884 #14	ENSGT00390000002204 #15	ENSGT00950000182882.A.b.b #17	ENSGT00510000049102 #19	ENSGT00940000160532 #20	ENSGT00940000153568.B #21	ENSGT00390000011515 #22	ENSGT00940000154817.b.b.b #23	ENSGT00940000159158 #24	ENSGT00940000159213 #25	ENSGT00940000159862 #26	ENSGT00940000155984 #27	ENSGT00940000163000 #28	ENSGT00940000156332.d.b #29	ENSGT00940000157211 #30	ENSGT00390000010354 #32	ENSGT00390000006925 #33	ENSGT00940000160618 #34	ENSGT00390000006225 #35	ENSGT00940000154846.b #36	ENSGT00390000015352 #37	ENSGT00390000008042.A.b
Guinea pig	MODERN SPECIES	3	POLR2D (ENSCPOG00000002571)	WDR33 (ENSCPOG00000013783) #7	GPR17 (ENSCPOG00000040431) #10	LIMS2 (ENSCPOG00000001898) #9	ENSCPOG00000001892	IWS1 (ENSCPOG00000009405) #12	PROC (ENSCPOG00000012838) #13	MAP3K2 (ENSCPOG00000002905) #14	ERCC3 (ENSCPOG00000002144) #15	BIN1 (ENSCPOG00000024539) #17	ENSCPOG00000036325 #19	ENSCPOG00000040075	ENSCPOG00000031058	CNTNAP5 (ENSCPOG00000004241) #20	TSN (ENSCPOG00000035645) #21	NIFK (ENSCPOG00000007472) #22	CLASP1 (ENSCPOG00000011527) #23	TFCP2L1 (ENSCPOG00000011523) #24	GLI2 (ENSCPOG00000015189) #25	INHBB (ENSCPOG00000032914) #26	RALB (ENSCPOG00000032717) #27	EPB41L5 (ENSCPOG00000003780) #29	PTPN4 (ENSCPOG00000032764) #30	TMEM177 (ENSCPOG00000037867) #32	ENSCPOG00000004735	SCTR (ENSCPOG00000015317) #34	TMEM37 (ENSCPOG00000032025) #35	ENSCPOG00000019725	DBI (ENSCPOG00000000415) #36	C2orf76 (ENSCPOG00000038860) #37	STEAP3 (ENSCPOG00000006387)
Hystricomorpha_b	ANCESTRAL SPECIES	67	ENSGT00440000037733.d	ENSGT00390000010397.b.f	ENSGT00390000004912	ENSGT00730000111130.b #7	ENSGT00940000153518.d.a #9	ENSGT01100000263537.b.a.a.b.a #10	ENSGT00940000157247 #11	ENSGT00720000108834 #12	ENSGT00940000154505.B #13	ENSGT00940000156884 #14	ENSGT00390000002204 #15	ENSGT00950000182882.A.b.b #17	ENSGT01040000240573 #18	ENSGT00510000049102 #19	ENSGT00940000153568.B #21	ENSGT00390000011515 #22	ENSGT00940000154817.b.b.b #23	ENSGT00940000159158 #24	ENSGT00940000159213 #25	ENSGT00940000159862 #26	ENSGT00940000155984 #27	ENSGT00940000163000 #28	ENSGT00940000156332.d.b #29	ENSGT00940000157211 #30	ENSGT00390000010354 #32	ENSGT00390000006925 #33	ENSGT00940000160618 #34	ENSGT00390000006225 #35	ENSGT00940000154846.b #36	ENSGT00390000015352 #37	ENSGT00390000008042.A.b
Long-tailed chinchilla	MODERN SPECIES	166	WDR33 (ENSCLAG00000005199) #7	LIMS2 (ENSCLAG00000005260) #9	GPR17 (ENSCLAG00000005855) #10	MYO7B (ENSCLAG00000006979) #11	IWS1 (ENSCLAG00000008232) #12	PROC (ENSCLAG00000002690) #13	MAP3K2 (ENSCLAG00000002850) #14	ERCC3 (ENSCLAG00000002965) #15	BIN1 (ENSCLAG00000003943) #17	ENSCLAG00000004213	ENSCLAG00000002170 #19	ENSCLAG00000002210	CNTNAP5 (ENSCLAG00000002809) #20	ENSCLAG00000004414	TSN (ENSCLAG00000006171) #21	NIFK (ENSCLAG00000006296) #22	CLASP1 (ENSCLAG00000003845) #23	TFCP2L1 (ENSCLAG00000003321) #24	GLI2 (ENSCLAG00000003886) #25	INHBB (ENSCLAG00000002594) #26	RALB (ENSCLAG00000002612) #27	ENSCLAG00000002685	EPB41L5 (ENSCLAG00000002942) #29	PTPN4 (ENSCLAG00000002781) #30	TMEM177 (ENSCLAG00000002898) #32	CFAP221 (ENSCLAG00000003127) #33	SCTR (ENSCLAG00000003965) #34	TMEM37 (ENSCLAG00000004567) #35	DBI (ENSCLAG00000002481) #36	ENSCLAG00000002520 #37	STEAP3 (ENSCLAG00000002741)
Degu	MODERN SPECIES	126			ENSODEG00000019073	ENSODEG00000004554	ENSODEG00000005181	HMMR (ENSODEG00000004387)	ENSODEG00000004867	ENSODEG00000005448	TENM2 (ENSODEG00000005069)	WWC1 (ENSODEG00000004850)	RARS1 (ENSODEG00000005980)	ENSODEG00000005759	FBLL1 (ENSODEG00000019199)	PANK3 (ENSODEG00000005503)	SLIT3 (ENSODEG00000005145)	ENSODEG00000006240 #22	INSYN2B (ENSODEG00000006097)	DOCK2 (ENSODEG00000004282)	FOXI1 (ENSODEG00000005115)	LCP2 (ENSODEG00000004197)	KCNMB1 (ENSODEG00000004061)	KCNIP1 (ENSODEG00000005120)	GABRP (ENSODEG00000004715)	ENSODEG00000004642	ENSODEG00000004521	TLX3 (ENSODEG00000004462)	ENSODEG00000004332	CHD9 (ENSODEG00000004466)	RBL2 (ENSODEG00000008958)	ENSODEG00000006168	ENSODEG00000005860
Naked mole-rat female	DUPLICATION
Naked mole-rat female	DUPLICATION
Naked mole-rat female	DUPLICATION
Naked mole-rat female	MODERN SPECIES	22	ENSHGLG00000033075	MAP3K2 (ENSHGLG00000012717) #14	ENSHGLG00000011014 #15	ENSHGLG00000012209 #17	ENSHGLG00000047394	ENSHGLG00000004732	ENSHGLG00000007724	ENSHGLG00000010314	ENSHGLG00000045731 #19	ENSHGLG00000034645	ENSHGLG00000041610	ENSHGLG00000008731	ENSHGLG00000038753	ENSHGLG00000042408	TSN (ENSHGLG00000037915) #21	MKI67IP (ENSHGLG00000008673) #22	CLASP1 (ENSHGLG00000008239) #23	TFCP2L1 (ENSHGLG00000041072) #24	GLI2 (ENSHGLG00000004535) #25	INHBB (ENSHGLG00000009209) #26	ENSHGLG00000004693	ENSHGLG00000032912	RALB (ENSHGLG00000037096) #27	TMEM185B (ENSHGLG00000034185) #28	ENSHGLG00000008402 #29	ENSHGLG00000035501	PTPN4 (ENSHGLG00000008471) #30	TMEM177 (ENSHGLG00000014801) #32	ENSHGLG00000012507	CFAP221 (ENSHGLG00000016525) #33	SCTR (ENSHGLG00000014846) #34
Naked mole-rat female	MODERN SPECIES	15	HPS4 (ENSHGLG00000006487)	SRRD (ENSHGLG00000007556)	TFIP11 (ENSHGLG00000008873)	TPST2 (ENSHGLG00000010327)	CRYBB1 (ENSHGLG00000010592)	CRYBA4 (ENSHGLG00000011408)	ENSHGLG00000047034	MN1 (ENSHGLG00000005808)	ENSHGLG00000006229	ENSHGLG00000035833	TTC28 (ENSHGLG00000007637)	CHEK2 (ENSHGLG00000011056)	HSCB (ENSHGLG00000006538)	CCDC117 (ENSHGLG00000041095)	ENSHGLG00000031902	ENSHGLG00000034713 #22	ENSHGLG00000007746	ENSHGLG00000009079	ENSHGLG00000020861	ENSHGLG00000035063	EMID1 (ENSHGLG00000011236)	RHBDD3 (ENSHGLG00000016038)	EWSR1 (ENSHGLG00000017920)	GAS2L1 (ENSHGLG00000014054)	RASL10A (ENSHGLG00000018990)	AP1B1 (ENSHGLG00000017960)	ENSHGLG00000020800	ENSHGLG00000047035	NEFH (ENSHGLG00000017978)	ENSHGLG00000018396	NIPSNAP1 (ENSHGLG00000034061)
Naked mole-rat female	MODERN SPECIES	27	ENSHGLG00000047329	ENSHGLG00000025225	ENSHGLG00000017149	ENSHGLG00000019355	ENSHGLG00000035747	LRCH3 (ENSHGLG00000019171)	IQCG (ENSHGLG00000018834)	RPL35A (ENSHGLG00000046416)	ENSHGLG00000014676	ENSHGLG00000014650	ENSHGLG00000041896	ENSHGLG00000014589	ATP11B (ENSHGLG00000014553)	SOX2 (ENSHGLG00000046210)	ENSHGLG00000032116	ENSHGLG00000050891 #22	ENSHGLG00000014387	FXR1 (ENSHGLG00000018814)	ENSHGLG00000039606	CCDC39 (ENSHGLG00000016969)	TTC14 (ENSHGLG00000016959)	ENSHGLG00000016952	PEX5L (ENSHGLG00000016946)	USP13 (ENSHGLG00000014472)	NDUFB5 (ENSHGLG00000014377)	MRPL47 (ENSHGLG00000033799)	ACTL6A (ENSHGLG00000013350)	GNB4 (ENSHGLG00000012880)	ENSHGLG00000044219	MFN1 (ENSHGLG00000012515)	ZNF639 (ENSHGLG00000050776)
Naked mole-rat female	MODERN SPECIES	4	ENSHGLG00000010854	ENSHGLG00000049850	ENSHGLG00000044804	ENSHGLG00000033270	MXI1 (ENSHGLG00000037614)	SMNDC1 (ENSHGLG00000013390)	DUSP5 (ENSHGLG00000012607)	ENSHGLG00000045441	SMC3 (ENSHGLG00000014422)	ENSHGLG00000036688	RBM20 (ENSHGLG00000013206)	PDCD4 (ENSHGLG00000010690)	BBIP1 (ENSHGLG00000010067)	ENSHGLG00000010758	ADRA2A (ENSHGLG00000043876)	ENSHGLG00000038445 #22	GPAM (ENSHGLG00000011966)	TECTB (ENSHGLG00000012176)	ENSHGLG00000011463	ACSL5 (ENSHGLG00000010820)	ZDHHC6 (ENSHGLG00000016136)	VTI1A (ENSHGLG00000011937)	ENSHGLG00000038175	ENSHGLG00000012013	HABP2 (ENSHGLG00000014463)	NRAP (ENSHGLG00000011978)	CASP7 (ENSHGLG00000019081)	PLEKHS1 (ENSHGLG00000018715)	DCLRE1A (ENSHGLG00000013938)	NHLRC2 (ENSHGLG00000013432)	ADRB1 (ENSHGLG00000039436)
Sciuridae	ANCESTRAL SPECIES	10	ENSGT00730000111130 #7	ENSGT00390000018525.b #8	ENSGT00940000153518.d.a #9	ENSGT01100000263537.b.a.a.b.a #10	ENSGT00940000157247 #11	ENSGT00720000108834 #12	ENSGT00940000154505.B #13	ENSGT00940000156884 #14	ENSGT00390000002204.h #15	ENSGT00950000182905.a.b #16	ENSGT00950000182882.A.b.b #17	ENSGT01040000240573 #18	ENSGT00510000049102 #19	ENSGT00940000164023	ENSGT00940000153568.B #21	ENSGT00390000011515 #22	ENSGT00940000154817.b.b.b #23	ENSGT00940000159158 #24	ENSGT00940000159213 #25	ENSGT00910000148632	ENSGT00940000159862 #26	ENSGT00940000155984 #27	ENSGT00940000163000 #28	ENSGT00940000156332 #29	ENSGT00940000157211 #30	ENSGT00390000010354 #32	ENSGT00390000006925 #33	ENSGT00940000165152	ENSGT00940000160618 #34	ENSGT00390000006225 #35	ENSGT00940000154846.b #36
Marmotini	DUPLICATION
Marmotini	ANCESTRAL SPECIES	2	ENSGT00390000004912	ENSGT00730000111130 #7	ENSGT00390000018525.b #8	ENSGT00940000153518.d.a #9	ENSGT01100000263537.b.a.a.b.a #10	ENSGT00940000157247 #11	ENSGT00720000108834 #12	ENSGT00940000154505.B #13	ENSGT00940000156884 #14	ENSGT00390000002204.h #15	ENSGT00950000182905.a.b #16	ENSGT00950000182882.A.b.b #17	ENSGT00510000049102 #19	ENSGT00940000164023	ENSGT00940000153568.B #21	ENSGT00390000011515.i #22	ENSGT00940000154817.b.b.b #23	ENSGT00940000159158 #24	ENSGT00940000159213 #25	ENSGT00940000159862 #26	ENSGT00940000155984 #27	ENSGT00940000163000 #28	ENSGT00940000156332 #29	ENSGT00940000157211 #30	ENSGT00390000010354 #32	ENSGT00390000006925 #33	ENSGT00940000165152	ENSGT00940000160618 #34	ENSGT00390000006225 #35	ENSGT00940000154846.b #36	ENSGT00390000015352.h #37
Alpin marmot	DUPLICATION
Alpin marmot	MODERN SPECIES	5	SFT2D3 (ENSMMMG00000020673) #8	GPR17 (ENSMMMG00000020670) #10	LIMS2 (ENSMMMG00000020647) #9	MYO7B (ENSMMMG00000020579) #11	IWS1 (ENSMMMG00000020542) #12	PROC (ENSMMMG00000020528) #13	MAP3K2 (ENSMMMG00000020508) #14	ERCC3 (ENSMMMG00000020488) #15	CYP27C1 (ENSMMMG00000020475) #16	BIN1 (ENSMMMG00000020348) #17	ENSMMMG00000020311 #19	ENSMMMG00000020302	ENSMMMG00000020240	ENSMMMG00000020207	TSN (ENSMMMG00000020190) #21	ENSMMMG00000020184 #22	CLASP1 (ENSMMMG00000015185) #23	TFCP2L1 (ENSMMMG00000015130) #24	GLI2 (ENSMMMG00000015099) #25	ENSMMMG00000015084	SCOC (ENSMMMG00000015060)	MAML3 (ENSMMMG00000015052)	MGST2 (ENSMMMG00000015033)	SETD7 (ENSMMMG00000015001)	RAB33B (ENSMMMG00000014993)	NAA15 (ENSMMMG00000014966)	NDUFC1 (ENSMMMG00000014960)	MGARP (ENSMMMG00000014954)	ELF2 (ENSMMMG00000014882)	NOCT (ENSMMMG00000014877)	SLC7A11 (ENSMMMG00000014855)
Alpin marmot	MODERN SPECIES	6	ENSMMMG00000023800	ENSMMMG00000023802	ENSMMMG00000023805	ENSMMMG00000023807	ALMS1 (ENSMMMG00000000014)	EGR4 (ENSMMMG00000000036)	FBXO41 (ENSMMMG00000000040)	CCT7 (ENSMMMG00000000061)	PRADC1 (ENSMMMG00000000122)	SMYD5 (ENSMMMG00000000161)	NOTO (ENSMMMG00000000180)	RAB11FIP5 (ENSMMMG00000000200)	SFXN5 (ENSMMMG00000000237)	SPR (ENSMMMG00000000283)	EXOC6B (ENSMMMG00000000339)	ENSMMMG00000000391 #22	CYP26B1 (ENSMMMG00000000421)	ENSMMMG00000000440	DYSF (ENSMMMG00000000630)	ZNF638 (ENSMMMG00000003356)	PAIP2B (ENSMMMG00000004342)	NAGK (ENSMMMG00000004369)	TEX261 (ENSMMMG00000004388)	ANKRD53 (ENSMMMG00000004397)	ATP6V1B1 (ENSMMMG00000004412)	VAX2 (ENSMMMG00000004432)	CD207 (ENSMMMG00000004444)	CLEC4F (ENSMMMG00000004473)	ENSMMMG00000004479	FIGLA (ENSMMMG00000004487)	ADD2 (ENSMMMG00000004508)
Marmotini_b	ANCESTRAL SPECIES	10	ENSGT00390000004912	ENSGT00730000111130 #7	ENSGT00390000018525.b #8	ENSGT00940000153518.d.a #9	ENSGT01100000263537.b.a.a.b.a #10	ENSGT00940000157247 #11	ENSGT00720000108834 #12	ENSGT00940000154505.B #13	ENSGT00940000156884 #14	ENSGT00390000002204.h #15	ENSGT00950000182905.a.b #16	ENSGT00950000182882.A.b.b #17	ENSGT00510000049102 #19	ENSGT00940000164023	ENSGT00940000153568.B #21	ENSGT00390000011515.i #22	ENSGT00940000154817.b.b.b #23	ENSGT00940000159158 #24	ENSGT00940000159213 #25	ENSGT00940000159862 #26	ENSGT00940000155984 #27	ENSGT00940000163000 #28	ENSGT00940000156332 #29	ENSGT00940000157211 #30	ENSGT00390000010354 #32	ENSGT00940000165152	ENSGT00940000160618 #34	ENSGT00390000006225 #35	ENSGT00940000154846.b #36	ENSGT00390000015352.h #37	ENSGT00390000008042.A.b
Squirrel	MODERN SPECIES	69	AMMECR1L (ENSSTOG00000005573)	POLR2D (ENSSTOG00000023329)	WDR33 (ENSSTOG00000005531) #7	LIMS2 (ENSSTOG00000015367) #9	GPR17 (ENSSTOG00000027867) #10	MYO7B (ENSSTOG00000015334) #11	IWS1 (ENSSTOG00000028209) #12	PROC (ENSSTOG00000012215) #13	MAP3K2 (ENSSTOG00000011012) #14	ERCC3 (ENSSTOG00000011001) #15	BIN1 (ENSSTOG00000014936) #17	ENSSTOG00000003335 #19	ENSSTOG00000011454	ENSSTOG00000024819	TSN (ENSSTOG00000000972) #21	NIFK (ENSSTOG00000026392) #22	CLASP1 (ENSSTOG00000013087) #23	TFCP2L1 (ENSSTOG00000013080) #24	GLI2 (ENSSTOG00000004582) #25	INHBB (ENSSTOG00000025873) #26	RALB (ENSSTOG00000001208) #27	TMEM185B (ENSSTOG00000020073) #28	EPB41L5 (ENSSTOG00000015989) #29	PTPN4 (ENSSTOG00000015978) #30	TMEM177 (ENSSTOG00000029730) #32	ENSSTOG00000032843	SCTR (ENSSTOG00000006773) #34	TMEM37 (ENSSTOG00000006768) #35	DBI (ENSSTOG00000006759) #36	C2orf76 (ENSSTOG00000006753) #37	STEAP3 (ENSSTOG00000008264)
Arctic ground squirrel	MODERN SPECIES	399															TSN (ENSUPAG00010018700) #21	NIFK (ENSUPAG00010018708) #22	ENSUPAG00010018712	CLASP1 (ENSUPAG00010018726) #23	TFCP2L1 (ENSUPAG00010018983) #24	GLI2 (ENSUPAG00010019007) #25	INHBB (ENSUPAG00010019034) #26	RALB (ENSUPAG00010019038) #27	TMEM185B (ENSUPAG00010019044) #28	EPB41L5 (ENSUPAG00010019049) #29	PTPN4 (ENSUPAG00010019113) #30
Marmotini	ANCESTRAL SPECIES																	ENSGT00390000011515.j #22
Alpin marmot	MODERN SPECIES	105											ENSMMMG00000004260	ENSMMMG00000004268	ENSMMMG00000004271	ENSMMMG00000004279	ENSMMMG00000004285	ENSMMMG00000004287 #22	ENSMMMG00000004303	ENSMMMG00000004313	ZNF84 (ENSMMMG00000004319)	ZNF26 (ENSMMMG00000004328)	ZNF605 (ENSMMMG00000004339)	CHFR (ENSMMMG00000004363)	GOLGA3 (ENSMMMG00000004468)	ANKLE2 (ENSMMMG00000004532)	ENSMMMG00000004629	PXMP2 (ENSMMMG00000004639)	ENSMMMG00000004647	POLE (ENSMMMG00000004659)	ENSMMMG00000004726	GALNT9 (ENSMMMG00000004734)	NOC4L (ENSMMMG00000004756)
Eurasian red squirrel	MODERN SPECIES	12	PROC (ENSSVLG00005022371) #13	MAP3K2 (ENSSVLG00005022438) #14	ERCC3 (ENSSVLG00005022582) #15	CYP27C1 (ENSSVLG00005022797) #16	BIN1 (ENSSVLG00005023022) #17	TEX51 (ENSSVLG00005023271) #18	ENSSVLG00005023314 #19	ENSSVLG00005023335	ENSSVLG00005023373	ENSSVLG00005023517	ENSSVLG00005023548	ENSSVLG00005023566	ENSSVLG00005023597	ENSSVLG00005023632	TSN (ENSSVLG00005023674) #21	NIFK (ENSSVLG00005023724) #22	CLASP1 (ENSSVLG00005023791) #23	TFCP2L1 (ENSSVLG00005023914) #24	GLI2 (ENSSVLG00005023981) #25	ENSSVLG00005023991	ENSSVLG00005024019	INHBB (ENSSVLG00005024036) #26	RALB (ENSSVLG00005024049) #27	TMEM185B (ENSSVLG00005024068) #28	EPB41L5 (ENSSVLG00005024139) #29	PTPN4 (ENSSVLG00005000228) #30	ENSSVLG00005000270	TMEM177 (ENSSVLG00005000277) #32	CFAP221 (ENSSVLG00005000301) #33	SCTR (ENSSVLG00005000343) #34	TMEM37 (ENSSVLG00005000377) #35
Lagomorpha	ANCESTRAL SPECIES	382															ENSGT00940000153568.B #21	ENSGT00390000011515 #22	ENSGT00940000154817.b.b.b #23	ENSGT00940000159158 #24
Rabbit	DUPLICATION
Rabbit	MODERN SPECIES	585															TSN (ENSOCUG00000023529) #21	ENSOCUG00000032320 #22	ENSOCUG00000025571	CLASP1 (ENSOCUG00000009742) #23	TFCP2L1 (ENSOCUG00000006877) #24
Rabbit	MODERN SPECIES	8	KLHDC1 (ENSOCUG00000017367)	ENSOCUG00000031174	POLE2 (ENSOCUG00000015480)	ENSOCUG00000015466	MGAT2 (ENSOCUG00000015463)	ENSOCUG00000027946	LRR1 (ENSOCUG00000000121)	ENSOCUG00000027423	ENSOCUG00000033024	MDGA2 (ENSOCUG00000017002)	RPL10L (ENSOCUG00000015485)	ENSOCUG00000012678	ENSOCUG00000021198	ENSOCUG00000027427	ENSOCUG00000035475	ENSOCUG00000007451 #22	MIS18BP1 (ENSOCUG00000007550)	FANCM (ENSOCUG00000007539)	ENSOCUG00000007535	PRPF39 (ENSOCUG00000007531)	TOGARAM1 (ENSOCUG00000006378)	KLHL28 (ENSOCUG00000006372)	ENSOCUG00000008733	ENSOCUG00000031408	ENSOCUG00000010014	ENSOCUG00000038158	ENSOCUG00000036762	LRFN5 (ENSOCUG00000006290)	ACTG1 (ENSOCUG00000010443)	ENSOCUG00000038774	FBXO33 (ENSOCUG00000002494)
Pika	MODERN SPECIES	3511																ENSOPRG00000006938 #22
Tree shrew	MODERN SPECIES	4179																NIFK (ENSTBEG00000001123) #22
Laurasiatheria	ANCESTRAL SPECIES	12	ENSGT00730000111130 #7	ENSGT00390000018525.b #8	ENSGT00940000153518.d.a #9	ENSGT01100000263537.b.a.a.b.a #10	ENSGT00940000157247 #11	ENSGT00720000108834 #12	ENSGT00940000154505.B #13	ENSGT00940000156884 #14	ENSGT00390000002204 #15	ENSGT00950000182905.a.b #16	ENSGT00950000182882.A.b.b #17	ENSGT00510000049102 #19	ENSGT00940000160532 #20	ENSGT00940000164023	ENSGT00940000153568.B #21	ENSGT00390000011515 #22	ENSGT00940000154817.b.b.b #23	ENSGT00940000159158 #24	ENSGT00940000159213 #25	ENSGT00910000148632	ENSGT00940000159862 #26	ENSGT00910000147009	ENSGT00940000155984 #27	ENSGT00940000163000 #28	ENSGT00940000156332 #29	ENSGT00940000157211 #30	ENSGT00390000010354 #32	ENSGT00390000006925 #33	ENSGT00940000165152	ENSGT00940000160618 #34	ENSGT00390000006225 #35
Laurasiatheria_a	ANCESTRAL SPECIES	16	ENSGT00730000111130 #7	ENSGT00390000018525.b #8	ENSGT00940000153518.d.a #9	ENSGT01100000263537.b.a.a.b.a #10	ENSGT00940000157247 #11	ENSGT00720000108834 #12	ENSGT00940000154505.B #13	ENSGT00940000156884 #14	ENSGT00390000002204 #15	ENSGT00950000182905.a.b #16	ENSGT00950000182882.A.b.b #17	ENSGT01040000240615	ENSGT00510000049102 #19	ENSGT00940000160532 #20	ENSGT00940000153568.B #21	ENSGT00390000011515 #22	ENSGT00940000154817.b.b.b #23	ENSGT00940000159158 #24	ENSGT00910000148632	ENSGT00940000159213 #25	ENSGT00910000147009	ENSGT00940000159862 #26	ENSGT00940000155984 #27	ENSGT00940000163000 #28	ENSGT00940000156332 #29	ENSGT00940000157211 #30	ENSGT00390000010354 #32	ENSGT00390000006925 #33	ENSGT00940000165152	ENSGT00940000160618 #34	ENSGT00390000006225 #35
Artiodactyla	ANCESTRAL SPECIES	13	ENSGT00730000111130 #7	ENSGT00390000018525.b #8	ENSGT00940000153518.d.a #9	ENSGT01100000263537.b.a.a.b.a #10	ENSGT00940000157247 #11	ENSGT00720000108834 #12	ENSGT00940000154505.B #13	ENSGT00940000156884 #14	ENSGT00390000002204 #15	ENSGT00950000182905.a.b #16	ENSGT00950000182882.A.b.b #17	ENSGT01040000240615	ENSGT00510000049102 #19	ENSGT00940000160532 #20	ENSGT00940000153568.B #21	ENSGT00390000011515 #22	ENSGT00940000154817.b.b.b #23	ENSGT00940000159158 #24	ENSGT00910000148632	ENSGT00940000159213 #25	ENSGT00910000147009	ENSGT00940000159862 #26	ENSGT00940000155984 #27	ENSGT00940000163000 #28	ENSGT00940000156332 #29	ENSGT00940000157211 #30	ENSGT00390000010354 #32	ENSGT00390000006925 #33	ENSGT00940000165152	ENSGT00940000160618 #34	ENSGT00390000006225 #35
Suina	ANCESTRAL SPECIES	48							ENSGT00940000154505.B #13	ENSGT00940000156884 #14	ENSGT00390000002204 #15	ENSGT00950000182882.A.b.b #17	ENSGT01040000240615	ENSGT00510000049102 #19	ENSGT00390000010799.u.b.a.b.a.b	ENSGT00940000160532 #20	ENSGT00940000153568.B #21	ENSGT00390000011515 #22	ENSGT00940000154817.b.b.b #23	ENSGT00940000159158 #24	ENSGT00940000159213 #25	ENSGT00940000159862 #26	ENSGT00940000155984 #27	ENSGT00940000163000 #28	ENSGT00940000156332 #29	ENSGT00940000157211 #30	ENSGT00390000010354 #32	ENSGT00390000006925 #33	ENSGT00940000160618 #34	ENSGT00390000006225.b #35	ENSGT00940000154846.b.w.b #36	ENSGT00390000015352 #37	ENSGT00390000008042.A.b
Chacoan peccary	MODERN SPECIES	130	ENSCWAG00000008787	TDRP (ENSCWAG00000008747)	FBXO25 (ENSCWAG00000008583)	NIPA1 (ENSCWAG00000008507)	NIPA2 (ENSCWAG00000008395)	CYFIP1 (ENSCWAG00000008288)	TUBGCP5 (ENSCWAG00000008212)	CCDC115 (ENSCWAG00000008165)	IMP4 (ENSCWAG00000008113)	PTPN18 (ENSCWAG00000007858)	ENSCWAG00000021453	GYPC (ENSCWAG00000021445) #19	ENSCWAG00000021442	CNTNAP5 (ENSCWAG00000021427) #20	TSN (ENSCWAG00000021415) #21	NIFK (ENSCWAG00000021408) #22	CLASP1 (ENSCWAG00000021372) #23	TFCP2L1 (ENSCWAG00000021341) #24	GLI2 (ENSCWAG00000021323) #25	INHBB (ENSCWAG00000021316) #26	RALB (ENSCWAG00000021312) #27	TMEM185B (ENSCWAG00000021304) #28	EPB41L5 (ENSCWAG00000021284) #29	PTPN4 (ENSCWAG00000021254) #30	TMEM177 (ENSCWAG00000021241) #32	CFAP221 (ENSCWAG00000021212) #33	SCTR (ENSCWAG00000021195) #34	ENSCWAG00000021188 #35	ENSCWAG00000021169 #36	ENSCWAG00000021157	C2orf76 (ENSCWAG00000021154) #37
Pig	MODERN SPECIES	6	ENSSSCG00000031239	STEAP3 (ENSSSCG00000029304)	C2orf76 (ENSSSCG00000015718) #37	DBI (ENSSSCG00000032213) #36	ENSSSCG00000055602	PROC (ENSSSCG00000023693) #13	MAP3K2 (ENSSSCG00000030354) #14	ERCC3 (ENSSSCG00000015721) #15	ENSSSCG00000043454	BIN1 (ENSSSCG00000015720) #17	ENSSSCG00000050390	GYPC (ENSSSCG00000040701) #19	ENSSSCG00000026916	CNTNAP5 (ENSSSCG00000015726) #20	TSN (ENSSSCG00000015729) #21	NIFK (ENSSSCG00000015730) #22	CLASP1 (ENSSSCG00000039157) #23	ENSSSCG00000047828	TFCP2L1 (ENSSSCG00000054656) #24	GLI2 (ENSSSCG00000015733) #25	ENSSSCG00000052347	INHBB (ENSSSCG00000038610) #26	RALB (ENSSSCG00000025455) #27	ENSSSCG00000056885	TMEM185B (ENSSSCG00000038305) #28	EPB41L5 (ENSSSCG00000039185) #29	PTPN4 (ENSSSCG00000015743) #30	ENSSSCG00000048752	TMEM177 (ENSSSCG00000015742) #32	CFAP221 (ENSSSCG00000015741) #33	SCTR (ENSSSCG00000029536) #34
Artiodactyla_a	ANCESTRAL SPECIES	13	ENSGT00390000018525.b #8	ENSGT00940000153518.d.a #9	ENSGT01100000263537.b.a.a.b.a #10	ENSGT00940000157247 #11	ENSGT00720000108834 #12	ENSGT00940000154505.B #13	ENSGT00940000154474.C	ENSGT00940000156884 #14	ENSGT00390000002204 #15	ENSGT00950000182905.a.b #16	ENSGT00950000182882.A.b.b #17	ENSGT01040000240615	ENSGT00510000049102 #19	ENSGT00940000160532 #20	ENSGT00940000153568.B #21	ENSGT00390000011515 #22	ENSGT00940000154817.b.b.b #23	ENSGT00940000159158 #24	ENSGT00910000148632	ENSGT00940000159213 #25	ENSGT00910000147009	ENSGT00940000159862 #26	ENSGT00940000155984 #27	ENSGT00940000163000 #28	ENSGT00940000156332 #29	ENSGT00940000157211 #30	ENSGT00390000010354 #32	ENSGT00390000006925 #33	ENSGT00940000165152	ENSGT00940000160618 #34	ENSGT00390000006225 #35
Artiodactyla_b	ANCESTRAL SPECIES	12	ENSGT00730000111130 #7	ENSGT00390000018525.b #8	ENSGT00940000153518.d.a #9	ENSGT01100000263537.b.a.a.b.a #10	ENSGT00940000157247 #11	ENSGT00720000108834 #12	ENSGT00940000154474.C	ENSGT00940000156884 #14	ENSGT00390000002204 #15	ENSGT00950000182905.a.b #16	ENSGT00950000182882.A.b.b #17	ENSGT01040000240615	ENSGT00510000049102 #19	ENSGT00940000160532 #20	ENSGT00940000153568.B #21	ENSGT00390000011515 #22	ENSGT00940000154817.b.b.b #23	ENSGT00940000159158 #24	ENSGT00910000148632	ENSGT00940000159213 #25	ENSGT00910000147009	ENSGT00940000159862 #26	ENSGT00940000155984 #27	ENSGT00940000163000 #28	ENSGT00940000156332 #29	ENSGT00940000157211 #30	ENSGT00390000010354 #32	ENSGT00390000006925 #33	ENSGT00940000165152	ENSGT00940000160618 #34	ENSGT00390000006225 #35
Cetacea	ANCESTRAL SPECIES	14	ENSGT00940000153518.d.a #9	ENSGT01100000263537.b.a.a.b.a #10	ENSGT00940000157247 #11	ENSGT00720000108834 #12	ENSGT00940000154505.B #13	ENSGT00940000156884 #14	ENSGT00390000002204 #15	ENSGT00950000182905.a.b #16	ENSGT00950000182882.A.b.b #17	ENSGT01040000240615	ENSGT00510000049102 #19	ENSGT00940000160532 #20	ENSGT00390000008496.j.a.b	ENSGT00940000168340	ENSGT00940000153568.B #21	ENSGT00390000011515 #22	ENSGT00940000154817.b.b.b #23	ENSGT00940000159158 #24	ENSGT00940000154846.b.x #36	ENSGT00390000015352 #37	ENSGT00390000008042.A.b	ENSGT00940000156913.b	ENSGT00950000183074.C	ENSGT00940000160811	ENSGT00580000081600.c.b	ENSGT00390000011294	ENSGT01010000229817	ENSGT01010000222287.B.a.b.b	ENSGT00680000100037	ENSGT00940000154657.D	ENSGT00940000155065.mb
Odontoceti	ANCESTRAL SPECIES	13	ENSGT01100000263537.b.a.a.b.a #10	ENSGT00940000153518.d.a #9	ENSGT00940000157247 #11	ENSGT00720000108834 #12	ENSGT00940000154505.B #13	ENSGT00940000156884 #14	ENSGT00390000002204 #15	ENSGT00950000182905.a.b #16	ENSGT00950000182882.A.b.b #17	ENSGT01040000240615	ENSGT00510000049102 #19	ENSGT00940000160532 #20	ENSGT00390000008496.j.a.b	ENSGT00940000168340	ENSGT00940000153568.B #21	ENSGT00390000011515 #22	ENSGT00940000154817.b.b.b #23	ENSGT00940000159158 #24	ENSGT00940000154846.b.x #36	ENSGT00390000015352 #37	ENSGT00390000008042.A.b	ENSGT00940000156913.b	ENSGT00950000183074.C	ENSGT00940000160811	ENSGT00580000081600.c.b	ENSGT00390000011294	ENSGT01010000229817	ENSGT01010000222287.B.a.b.b	ENSGT00680000100037	ENSGT00940000154657.D	ENSGT00940000155065.mb
Odontoceti_a	ANCESTRAL SPECIES	10	ENSGT01100000263537.b.a.a.b.a #10	ENSGT00940000153518.d.a #9	ENSGT00940000157247 #11	ENSGT00720000108834 #12	ENSGT00940000154474.C	ENSGT00940000156884 #14	ENSGT00390000002204 #15	ENSGT00950000182905.a.b #16	ENSGT00950000182882.A.b.b #17	ENSGT01040000240615	ENSGT00510000049102 #19	ENSGT00940000160532 #20	ENSGT00390000008496.j.a.b	ENSGT00940000168340	ENSGT00940000153568.B #21	ENSGT00390000011515 #22	ENSGT00940000154817.b.b.b #23	ENSGT00940000159158 #24	ENSGT00940000154846.b.x #36	ENSGT00390000015352 #37	ENSGT00390000008042.A.b	ENSGT00940000156913.b	ENSGT00950000183074.C	ENSGT00940000160811	ENSGT00580000081600.c.b	ENSGT00390000011294	ENSGT01010000229817	ENSGT00680000100037	ENSGT00940000154657.D	ENSGT00940000155065.mb	ENSGT00390000005949
Odontoceti_b	ANCESTRAL SPECIES	12	ENSGT01100000263537.b.a.a.b.a #10	ENSGT00940000157247 #11	ENSGT00720000108834 #12	ENSGT00940000154474.C	ENSGT00940000156884 #14	ENSGT00390000002204 #15	ENSGT00950000182905.a.b #16	ENSGT00950000182882.A.b.b #17	ENSGT01040000240615	ENSGT00510000049102 #19	ENSGT00940000160532 #20	ENSGT00390000012916.y.b.a	ENSGT00390000008496.j.a.b	ENSGT00940000168340	ENSGT00940000153568.B #21	ENSGT00390000011515 #22	ENSGT00940000154817.b.b.b #23	ENSGT00940000159158 #24	ENSGT00940000154846.b.x #36	ENSGT00390000015352 #37	ENSGT00390000008042.A.b	ENSGT00940000156913.b	ENSGT00950000183074.C	ENSGT00940000160811	ENSGT00580000081600.c.b	ENSGT00390000011294	ENSGT01010000229817	ENSGT00680000100037	ENSGT00940000154657.D	ENSGT00940000155065.mb	ENSGT00390000005949
Monodontidae	ANCESTRAL SPECIES	10	ENSGT01100000263537.b.a.a.b.a #10	ENSGT00940000157247 #11	ENSGT00720000108834 #12	ENSGT00940000154474.C	ENSGT00940000156884 #14	ENSGT00390000002204 #15	ENSGT00950000182905.a.b #16	ENSGT00950000182882.A.b.b #17	ENSGT01040000240615	ENSGT00510000049102 #19	ENSGT00940000160532 #20	ENSGT00390000012916.y.b.a	ENSGT00390000008496.j.a.b	ENSGT00940000157629.e.b	ENSGT00940000153568.B #21	ENSGT00390000011515 #22	ENSGT00940000154817.b.b.b #23	ENSGT00940000159158 #24	ENSGT00940000154846.b.x #36	ENSGT00390000015352 #37	ENSGT00390000008042.A.b	ENSGT00940000156913.b	ENSGT00950000183074.C	ENSGT00940000160811	ENSGT00580000081600.c.b	ENSGT00390000011294	ENSGT01010000229817	ENSGT00680000100037	ENSGT00950000183010.a.a.a.b.a.a.a.a.b	ENSGT00940000154657.D	ENSGT00940000155065.mb
Beluga whale	MODERN SPECIES	5	GPR17 (ENSDLEG00000012515) #10	MYO7B (ENSDLEG00000012675) #11	IWS1 (ENSDLEG00000014497) #12	ENSDLEG00000014579	MAP3K2 (ENSDLEG00000014605) #14	ERCC3 (ENSDLEG00000014632) #15	CYP27C1 (ENSDLEG00000014679) #16	BIN1 (ENSDLEG00000014720) #17	ENSDLEG00000014894 #19	CNTNAP5 (ENSDLEG00000015048) #20	ENSDLEG00000015867	ENSDLEG00000015876	ENSDLEG00000015883	ENSDLEG00000015893	TSN (ENSDLEG00000015902) #21	NIFK (ENSDLEG00000015915) #22	CLASP1 (ENSDLEG00000015964) #23	TFCP2L1 (ENSDLEG00000016257) #24	ENSDLEG00000016288	DBI (ENSDLEG00000016300) #36	C2orf76 (ENSDLEG00000016309) #37	STEAP3 (ENSDLEG00000016318)	C1QL2 (ENSDLEG00000016331)	MARCO (ENSDLEG00000016344)	EN1 (ENSDLEG00000016364)	INSIG2 (ENSDLEG00000016370)	CCDC93 (ENSDLEG00000016397)	DDX18 (ENSDLEG00000016447)	ENSDLEG00000016473	DPP10 (ENSDLEG00000016504)	ACTR3 (ENSDLEG00000016689)
Narwhal	MODERN SPECIES	302	IWS1 (ENSMMNG00015008325) #12	ENSMMNG00015008296	MAP3K2 (ENSMMNG00015008282) #14	ERCC3 (ENSMMNG00015008261) #15	CYP27C1 (ENSMMNG00015008248) #16	BIN1 (ENSMMNG00015008145) #17	ENSMMNG00015008015	ENSMMNG00015007992 #19	ENSMMNG00015007979	CNTNAP5 (ENSMMNG00015007938) #20	ENSMMNG00015007917	ENSMMNG00015007905	ENSMMNG00015007894	TIPRL (ENSMMNG00015007877)	TSN (ENSMMNG00015007849) #21	NIFK (ENSMMNG00015007818) #22	CLASP1 (ENSMMNG00015007757) #23	TFCP2L1 (ENSMMNG00015007621) #24	DBI (ENSMMNG00015007543) #36	C2orf76 (ENSMMNG00015007492) #37	STEAP3 (ENSMMNG00015007462)	C1QL2 (ENSMMNG00015007435)	MARCO (ENSMMNG00015007408)	EN1 (ENSMMNG00015007385)	INSIG2 (ENSMMNG00015007370)	CCDC93 (ENSMMNG00015007324)	ENSMMNG00015007310	DDX18 (ENSMMNG00015007294)	ENSMMNG00015007279	DPP10 (ENSMMNG00015007053)	ACTR3 (ENSMMNG00015006959)
Vaquita	MODERN SPECIES	18	IWS1 (ENSPSNG00000021542) #12	PROC (ENSPSNG00000021490) #13	MAP3K2 (ENSPSNG00000021440) #14	ERCC3 (ENSPSNG00000021398) #15	CYP27C1 (ENSPSNG00000021361) #16	BIN1 (ENSPSNG00000021177) #17	ENSPSNG00000020985	ENSPSNG00000020949 #19	ENSPSNG00000020929	CNTNAP5 (ENSPSNG00000020801) #20	ENSPSNG00000020753	ENSPSNG00000020731	ENSPSNG00000020708	ENSPSNG00000020656	TSN (ENSPSNG00000020598) #21	NIFK (ENSPSNG00000020550) #22	CLASP1 (ENSPSNG00000020303) #23	TFCP2L1 (ENSPSNG00000020132) #24	ENSPSNG00000020099	DBI (ENSPSNG00000019962) #36	C2orf76 (ENSPSNG00000019896) #37	STEAP3 (ENSPSNG00000019857)	C1QL2 (ENSPSNG00000019823)	MARCO (ENSPSNG00000019604)	EN1 (ENSPSNG00000019538)	INSIG2 (ENSPSNG00000019505)	CCDC93 (ENSPSNG00000019464)	DDX18 (ENSPSNG00000019409)	DPP10 (ENSPSNG00000018963)	ACTR3 (ENSPSNG00000018767)	SLC35F5 (ENSPSNG00000018619)
Dolphin	MODERN SPECIES	1878															TSN (ENSTTRG00000005854) #21	NIFK (ENSTTRG00000005849) #22	CLASP1 (ENSTTRG00000005799) #23
Sperm whale	MODERN SPECIES	11	LIMS2 (ENSPCTG00005001713) #9	MYO7B (ENSPCTG00005001595) #11	IWS1 (ENSPCTG00005001541) #12	PROC (ENSPCTG00005001516) #13	MAP3K2 (ENSPCTG00005001469) #14	ERCC3 (ENSPCTG00005001437) #15	CYP27C1 (ENSPCTG00005001414) #16	ENSPCTG00005001376	ENSPCTG00005001360 #19	CNTNAP5 (ENSPCTG00005001326) #20	ENSPCTG00005001304	ENSPCTG00005001297	ENSPCTG00005001286	ENSPCTG00005001269	TSN (ENSPCTG00005001244) #21	NIFK (ENSPCTG00005001216) #22	CLASP1 (ENSPCTG00005001140) #23	TFCP2L1 (ENSPCTG00005001081) #24	ENSPCTG00005001064	DBI (ENSPCTG00005001026) #36	C2H2orf76 (ENSPCTG00005001002) #37	C1QL2 (ENSPCTG00005000985)	ENSPCTG00005000944	INSIG2 (ENSPCTG00005000920)	ENSPCTG00005000904	DDX18 (ENSPCTG00005000893)	ENSPCTG00005000885	DPP10 (ENSPCTG00005000715)	ACTR3 (ENSPCTG00005000631)	SLC35F5 (ENSPCTG00005000532)	ENSPCTG00005000510
Blue whale	DUPLICATION
Blue whale	MODERN SPECIES	1	ENSBMSG00010007206	ENSBMSG00010007218	STAB2 (ENSBMSG00010007242)	NT5DC3 (ENSBMSG00010007305)	HSP90B1 (ENSBMSG00010007331)	UQCC6 (ENSBMSG00010007373)	TDG (ENSBMSG00010007381)	GLT8D2 (ENSBMSG00010007404)	HCFC2 (ENSBMSG00010007426)	NFYB (ENSBMSG00010007437)	ENSBMSG00010007446	TXNRD1 (ENSBMSG00010007469)	ENSBMSG00010007543	ENSBMSG00010007559	SLC41A2 (ENSBMSG00010007567)	ENSBMSG00010007578 #22	NOPCHAP1 (ENSBMSG00010007590)	ALDH1L2 (ENSBMSG00010007618)	WASHC4 (ENSBMSG00010007660)	APPL2 (ENSBMSG00010007677)	ENSBMSG00010007699	ENSBMSG00010007719	NUAK1 (ENSBMSG00010007730)	CKAP4 (ENSBMSG00010007754)	TCP11L2 (ENSBMSG00010007768)	POLR3B (ENSBMSG00010007786)	RFX4 (ENSBMSG00010007824)	RIC8B (ENSBMSG00010007882)	TMEM263 (ENSBMSG00010007946)	CRY1 (ENSBMSG00010007959)	ABTB3 (ENSBMSG00010008002)
Blue whale	MODERN SPECIES	18	LIMS2 (ENSBMSG00010006734) #9	GPR17 (ENSBMSG00010006805) #10	MYO7B (ENSBMSG00010006859) #11	IWS1 (ENSBMSG00010006929) #12	PROC (ENSBMSG00010006968) #13	MAP3K2 (ENSBMSG00010006995) #14	ERCC3 (ENSBMSG00010007021) #15	CYP27C1 (ENSBMSG00010007055) #16	BIN1 (ENSBMSG00010007493) #17	ENSBMSG00010008477	GYPC (ENSBMSG00010008508) #19	CNTNAP5 (ENSBMSG00010008532) #20	ENSBMSG00010008579	ENSBMSG00010008591	TSN (ENSBMSG00010008606) #21	ENSBMSG00010008626 #22	CLASP1 (ENSBMSG00010008661) #23	TFCP2L1 (ENSBMSG00010008719) #24	ENSBMSG00010008755 #36	C2orf76 (ENSBMSG00010008794) #37	STEAP3 (ENSBMSG00010008818)	C1QL2 (ENSBMSG00010008829)	MARCO (ENSBMSG00010008865)	EN1 (ENSBMSG00010008910)	INSIG2 (ENSBMSG00010008925)	CCDC93 (ENSBMSG00010008946)	ENSBMSG00010008969	ENSBMSG00010000112	ENSBMSG00010000138	DPP10 (ENSBMSG00010000227)	ACTR3 (ENSBMSG00010000443)
Pecora	ANCESTRAL SPECIES	24											ENSGT01040000240615	ENSGT00510000049102 #19	ENSGT00940000160532 #20	ENSGT01000000221473	ENSGT00940000153568.B #21	ENSGT00390000011515 #22	ENSGT01040000241150	ENSGT00940000154817.b.b.b #23	ENSGT00940000159158 #24	ENSGT00910000148632	ENSGT00940000159213 #25	ENSGT00940000159862 #26	ENSGT00940000155984 #27	ENSGT00940000163000 #28	ENSGT00940000156332 #29	ENSGT00940000157211 #30	ENSGT00390000010354 #32	ENSGT00390000006925 #33	ENSGT00940000165152	ENSGT00940000160618 #34	ENSGT00390000006225 #35
Percora_a	ANCESTRAL SPECIES	5	ENSGT00940000154014.b.b	ENSGT00940000155282	ENSGT00940000160335	ENSGT00940000156056.A	ENSGT00950000182910.a.a.a	ENSGT00940000155812	ENSGT00940000155752	ENSGT01050000244905.D	ENSGT01050000244905.E	ENSGT00390000010463.a.b	ENSGT01040000240615	ENSGT00510000049102 #19	ENSGT00940000160532 #20	ENSGT01000000221473	ENSGT00940000153568.B #21	ENSGT00390000011515 #22	ENSGT01040000241150	ENSGT00940000154817.b.b.b #23	ENSGT00940000159158 #24	ENSGT00910000148632	ENSGT00940000159213 #25	ENSGT00940000159862 #26	ENSGT00940000155984 #27	ENSGT00940000163000 #28	ENSGT00940000156332 #29	ENSGT00940000157211 #30	ENSGT00390000010354 #32	ENSGT00390000006925 #33	ENSGT00940000165152	ENSGT00940000160618 #34	ENSGT00390000006225 #35
Bovidae	ANCESTRAL SPECIES	8	ENSGT00940000160335	ENSGT01030000235049	ENSGT00940000156056.A	ENSGT00950000182910.a.a.a	ENSGT00940000155812	ENSGT00940000155752	ENSGT01050000244905.D	ENSGT01050000244905.E	ENSGT00390000010463.a.b	ENSGT01040000240615	ENSGT00510000049102 #19	ENSGT00940000160532 #20	ENSGT01000000221473	ENSGT00950000183087.A.a.a.a.a.b	ENSGT00940000153568.B #21	ENSGT00390000011515 #22	ENSGT01040000241150	ENSGT00940000154817.b.b.b #23	ENSGT00940000159158 #24	ENSGT00910000148632	ENSGT00940000159213 #25	ENSGT00940000159862 #26	ENSGT00940000155984 #27	ENSGT00940000163000 #28	ENSGT00940000156332 #29	ENSGT00940000157211 #30	ENSGT00390000010354 #32	ENSGT00390000006925 #33	ENSGT00940000165152	ENSGT00940000160618 #34	ENSGT00390000006225 #35
Caprinae	ANCESTRAL SPECIES	5	ENSGT00940000160335	ENSGT01030000235049	ENSGT00940000156056.A	ENSGT00950000182910.a.a.a	ENSGT00940000155812	ENSGT00940000155752	ENSGT01050000244905.D	ENSGT01050000244905.E	ENSGT00390000010463.a.b	ENSGT00510000049102 #19	ENSGT00940000160532 #20	ENSGT00970000198317	ENSGT00950000182802.B.a.a.a.b.a.b	ENSGT00950000183087.A.a.a.a.a.b	ENSGT00940000153568.B #21	ENSGT00390000011515 #22	ENSGT01040000241150	ENSGT00940000154817.b.b.b #23	ENSGT00940000159158 #24	ENSGT00940000159213 #25	ENSGT00940000159862 #26	ENSGT00940000155984 #27	ENSGT00940000163000 #28	ENSGT00940000156332 #29	ENSGT00940000157211 #30	ENSGT00390000010354 #32	ENSGT00390000006925 #33	ENSGT00940000160618 #34	ENSGT00390000006225 #35	ENSGT00940000154846.b.x #36	ENSGT00390000015352 #37
Rambouillet Sheep	MODERN SPECIES	11	ENSOARG00020007893	TMEFF2 (ENSOARG00020007844)	CAVIN2 (ENSOARG00020007809)	ENSOARG00020007703	MYO1B (ENSOARG00020007023)	ENSOARG00020006933	CNTNAP5 (ENSOARG00020006735) #20	ENSOARG00020006673	ENSOARG00020006612	ENSOARG00020006595	ENSOARG00020006557	ENSOARG00020006534	ENSOARG00020024099	ENSOARG00020024083	TSN (ENSOARG00020024047) #21	NIFK (ENSOARG00020024037) #22	ENSOARG00020024020	CLASP1 (ENSOARG00020023927) #23	ENSOARG00020023891	TFCP2L1 (ENSOARG00020023824) #24	GLI2 (ENSOARG00020023763) #25	INHBB (ENSOARG00020023725) #26	RALB (ENSOARG00020023701) #27	TMEM185B (ENSOARG00020023687) #28	EPB41L5 (ENSOARG00020023616) #29	ENSOARG00020023578	PTPN4 (ENSOARG00020023367) #30	TMEM177 (ENSOARG00020023343) #32	CFAP221 (ENSOARG00020023250) #33	SCTR (ENSOARG00020023191) #34	TMEM37 (ENSOARG00020023172) #35
Goat	MODERN SPECIES	11	CAVIN2 (ENSCHIG00000019774)	NABP1 (ENSCHIG00000025573)	MYO1B (ENSCHIG00000013498)	STAT4 (ENSCHIG00000020943)	STAT1 (ENSCHIG00000009728)	GLS (ENSCHIG00000008500)	ENSCHIG00000026149	ENSCHIG00000021291	ENSCHIG00000020984 #19	ENSCHIG00000014237	CNTNAP5 (ENSCHIG00000009353) #20	ENSCHIG00000026511	ENSCHIG00000012076	ENSCHIG00000020518	TSN (ENSCHIG00000010715) #21	NIFK (ENSCHIG00000010512) #22	CLASP1 (ENSCHIG00000022334) #23	ENSCHIG00000010032	TFCP2L1 (ENSCHIG00000014608) #24	GLI2 (ENSCHIG00000017600) #25	INHBB (ENSCHIG00000024398) #26	RALB (ENSCHIG00000019125) #27	TMEM185B (ENSCHIG00000012850) #28	ENSCHIG00000009337 #29	ENSCHIG00000014138 #29	ENSCHIG00000018796	PTPN4 (ENSCHIG00000012348) #30	ENSCHIG00000021745	TMEM177 (ENSCHIG00000013456) #32	CFAP221 (ENSCHIG00000017692) #33	SCTR (ENSCHIG00000023110) #34
Bovinae	ANCESTRAL SPECIES	5	ENSGT00390000012078.b.v	ENSGT01030000235049	ENSGT00940000156056.A	ENSGT00950000182910.a.a.a	ENSGT00940000155812	ENSGT00940000155752	ENSGT01050000244905.D	ENSGT01050000244905.E	ENSGT00390000010463.a.b	ENSGT01040000240615	ENSGT00510000049102 #19	ENSGT00940000160532 #20	ENSGT00970000198317	ENSGT00950000183087.A.a.a.a.a.b	ENSGT00940000153568.B #21	ENSGT00390000011515 #22	ENSGT01040000241150	ENSGT00940000154817.b.b.b #23	ENSGT00940000159158 #24	ENSGT00910000148632	ENSGT00940000159213 #25	ENSGT00940000159862 #26	ENSGT00940000155984 #27	ENSGT00940000163000 #28	ENSGT00940000156332 #29	ENSGT00940000157211 #30	ENSGT00390000010354 #32	ENSGT00390000006925 #33	ENSGT00940000165152	ENSGT00940000160618 #34	ENSGT00390000006225 #35
Bos	ANCESTRAL SPECIES	6	ENSGT00940000156056.A	ENSGT00950000182910.a.a.a	ENSGT00940000155812	ENSGT00940000155752	ENSGT01100000263480.a.b.a.b.a.a.b.a.a.a.a.a	ENSGT01050000244905.D	ENSGT01050000244905.E	ENSGT00390000010463.a.b	ENSGT01040000240615	ENSGT00510000049102 #19	ENSGT00940000160532.i #20	ENSGT00970000198317	ENSGT00950000183087.A.a.a.a.a.b	ENSGT00940000153568.B #21	ENSGT00390000018141.i.a.b.b.b.a.b.a.b.b.a.a.a.a	ENSGT00390000011515 #22	ENSGT01040000241150	ENSGT00940000154817.b.b.b #23	ENSGT00940000159158 #24	ENSGT00940000159213.g #25	ENSGT00910000148632	ENSGT00940000154631.f.c.a	ENSGT00940000159213.h #25	ENSGT00940000159862 #26	ENSGT01100000263480.a.a.b.b.b.a.a.a.a.b.b.a.a.a.a.b.a.b.a.a.a.a	ENSGT00940000155984 #27	ENSGT00940000163000 #28	ENSGT00940000156332 #29	ENSGT00940000157211 #30	ENSGT00390000010354 #32	ENSGT00390000006925 #33
Bos_a	ANCESTRAL SPECIES	4	ENSGT00390000012078.b.v	ENSGT00940000156056.A	ENSGT00950000182910.a.a.a	ENSGT00940000155812	ENSGT00940000155752	ENSGT01100000263480.a.b.a.b.a.a.b.a.a.a.a.a	ENSGT01050000244905.D	ENSGT01050000244905.E	ENSGT00390000010463.a.b	ENSGT01040000240615	ENSGT00510000049102 #19	ENSGT00940000160532.i #20	ENSGT00950000183087.A.a.a.a.a.b	ENSGT00940000153568.B #21	ENSGT00390000018141.i.a.b.b.b.a.b.a.b.b.a.a.a.a	ENSGT00390000011515 #22	ENSGT00940000154817.b.b.b #23	ENSGT00940000159158 #24	ENSGT00940000159213.g #25	ENSGT00910000148632	ENSGT00940000154631.f.c.a	ENSGT00940000159862 #26	ENSGT01100000263480.a.a.b.b.b.a.a.a.a.b.b.a.a.a.a.b.a.b.a.a.a.a	ENSGT00940000155984 #27	ENSGT00940000163000 #28	ENSGT00940000156332 #29	ENSGT00940000157211 #30	ENSGT00390000010354 #32	ENSGT00390000006925 #33	ENSGT00940000160618 #34	ENSGT00390000006225 #35
Domestic yak	MODERN SPECIES	11	TMEFF2 (ENSBGRG00000001495)	CAVIN2 (ENSBGRG00000001540)	NABP1 (ENSBGRG00000001561)	MYO1B (ENSBGRG00000001627)	ENSBGRG00000001748	STAT4 (ENSBGRG00000001762)	STAT1 (ENSBGRG00000001789)	GLS (ENSBGRG00000001930)	ENSBGRG00000002094	ENSBGRG00000002155 #19	ENSBGRG00000002176	CNTNAP5 (ENSBGRG00000002205) #20	ENSBGRG00000002296	TSN (ENSBGRG00000002313) #21	ENSBGRG00000002344	NIFK (ENSBGRG00000002355) #22	CLASP1 (ENSBGRG00000002404) #23	ENSBGRG00000002469	TFCP2L1 (ENSBGRG00000002489) #24	GLI2 (ENSBGRG00000002594) #25	ENSBGRG00000002619	ENSBGRG00000002630	INHBB (ENSBGRG00000002649) #26	ENSBGRG00000002654	RALB (ENSBGRG00000002659) #27	TMEM185B (ENSBGRG00000002677) #28	EPB41L5 (ENSBGRG00000002704) #29	PTPN4 (ENSBGRG00000002760) #30	TMEM177 (ENSBGRG00000002782) #32	CFAP221 (ENSBGRG00000002795) #33	SCTR (ENSBGRG00000002863) #34
Wild yak	MODERN SPECIES	278													ENSBMUG00000002757	ENSBMUG00000002741	TSN (ENSBMUG00000002706) #21	NIFK (ENSBMUG00000002668) #22	ENSBMUG00000002661	ENSBMUG00000002653	CLASP1 (ENSBMUG00000002182) #23	TFCP2L1 (ENSBMUG00000001255) #24
Bos_b	ANCESTRAL SPECIES	3	ENSGT00950000182910.a.a.a	ENSGT00940000155812	ENSGT00940000155752	ENSGT01100000263480.a.b.a.b.a.a.b.a.a.a.a.a	ENSGT01050000244905.D	ENSGT01050000244905.E	ENSGT00390000010463.a.b	ENSGT01040000240615	ENSGT00510000049102 #19	ENSGT00390000014038.d	ENSGT00940000160532.i #20	ENSGT01000000221473	ENSGT00950000183087.A.a.a.a.a.b	ENSGT00940000153568.B #21	ENSGT00390000018141.i.a.b.b.b.a.b.a.b.b.a.a.a.a	ENSGT00390000011515 #22	ENSGT01040000241150	ENSGT00940000154817.b.b.b #23	ENSGT00940000159158 #24	ENSGT00940000159213.g #25	ENSGT00940000154631.f.c.a	ENSGT00940000159213.h #25	ENSGT00940000159862 #26	ENSGT01100000263480.a.a.b.b.b.a.a.a.a.b.b.a.a.a.a.b.a.b.a.a.a.a	ENSGT00940000155984 #27	ENSGT00940000163000 #28	ENSGT00940000156332 #29	ENSGT00940000157211 #30	ENSGT00390000010354 #32	ENSGT00390000006925 #33	ENSGT00940000165152
Hybrid Bos Indicus	MODERN SPECIES	11	MYO1B (ENSBIXG00005010764)	ENSBIXG00005010825	STAT4 (ENSBIXG00005010855)	STAT1 (ENSBIXG00005011100)	GLS (ENSBIXG00005011326)	ENSBIXG00005011436	ENSBIXG00005006423 #19	ENSBIXG00005011594	ENSBIXG00005011625	CNTNAP5 (ENSBIXG00005001154) #20	ENSBIXG00005011809	ENSBIXG00005011845	ENSBIXG00005001185	TSN (ENSBIXG00005011894) #21	ENSBIXG00005001195	NIFK (ENSBIXG00005011934) #22	ENSBIXG00005011943	CLASP1 (ENSBIXG00005012045) #23	TFCP2L1 (ENSBIXG00005012144) #24	GLI2 (ENSBIXG00005012202) #25	ENSBIXG00005012261	INHBB (ENSBIXG00005012280) #26	ENSBIXG00005012282	ENSBIXG00005000394 #27	TMEM185B (ENSBIXG00005006918) #28	ENSBIXG00005001294	EPB41L5 (ENSBIXG00005001310) #29	PTPN4 (ENSBIXG00005012430) #30	TMEM177 (ENSBIXG00005000338) #32	CFAP221 (ENSBIXG00005012511) #33	SCTR (ENSBIXG00005001379) #34
Cow	MODERN SPECIES	11	CAVIN2 (ENSBTAG00000018497)	NABP1 (ENSBTAG00000018653)	MYO1B (ENSBTAG00000011256)	STAT4 (ENSBTAG00000046699)	STAT1 (ENSBTAG00000007867)	ENSBTAG00000051479	GLS (ENSBTAG00000007863)	GYPC (ENSBTAG00000014863) #19	ENSBTAG00000051403	ENSBTAG00000049994	CNTNAP5 (ENSBTAG00000031898) #20	ENSBTAG00000054992	ENSBTAG00000050710	ENSBTAG00000031918	TSN (ENSBTAG00000006059) #21	NIFK (ENSBTAG00000019387) #22	ENSBTAG00000053411	CLASP1 (ENSBTAG00000019781) #23	TFCP2L1 (ENSBTAG00000007765) #24	GLI2 (ENSBTAG00000011682) #25	ENSBTAG00000051422 #25	INHBB (ENSBTAG00000049058) #26	RALB (ENSBTAG00000032021) #27	TMEM185B (ENSBTAG00000026829) #28	EPB41L5 (ENSBTAG00000018236) #29	PTPN4 (ENSBTAG00000020855) #30	TMEM177 (ENSBTAG00000009058) #32	CFAP221 (ENSBTAG00000009057) #33	ENSBTAG00000054356	SCTR (ENSBTAG00000013619) #34	TMEM37 (ENSBTAG00000026825) #35
American bison	MODERN SPECIES	3330	TMEFF2 (ENSBBBG00000003061)	CAVIN2 (ENSBBBG00000013974)	NABP1 (ENSBBBG00000003073)	ENSBBBG00000003077	MYO1B (ENSBBBG00000014136)	STAT4 (ENSBBBG00000003205)	STAT1 (ENSBBBG00000014210)	GLS (ENSBBBG00000014264)	ENSBBBG00000003248	ENSBBBG00000007984 #19	ENSBBBG00000007216	CNTNAP5 (ENSBBBG00000003260) #20	ENSBBBG00000014368	ENSBBBG00000007075	TSN (ENSBBBG00000003304) #21	NIFK (ENSBBBG00000014405) #22	ENSBBBG00000014409	CLASP1 (ENSBBBG00000014831) #23	TFCP2L1 (ENSBBBG00000007171) #24	ENSBBBG00000014905	ENSBBBG00000001239 #25	INHBB (ENSBBBG00000001207) #26	RALB (ENSBBBG00000001195) #27	TMEM185B (ENSBBBG00000001193) #28	EPB41L5 (ENSBBBG00000000921) #29	PTPN4 (ENSBBBG00000000869) #30	TMEM177 (ENSBBBG00000000859) #32	CFAP221 (ENSBBBG00000000832) #33	SCTR (ENSBBBG00000014923) #34	TMEM37 (ENSBBBG00000008749) #35	DBI (ENSBBBG00000003635) #36
Siberian musk deer	MODERN SPECIES	348	CAVIN2 (ENSMMSG00000009885)	ENSMMSG00000009870	NABP1 (ENSMMSG00000009814)	MYO1B (ENSMMSG00000009576)	STAT4 (ENSMMSG00000009440)	STAT1 (ENSMMSG00000009167)	GLS (ENSMMSG00000008990)	ENSMMSG00000008864	ENSMMSG00000008835 #19	ENSMMSG00000008783	CNTNAP5 (ENSMMSG00000008620) #20	ENSMMSG00000008590	ENSMMSG00000008573	ENSMMSG00000008556	TSN (ENSMMSG00000008451) #21	NIFK (ENSMMSG00000008425) #22	ENSMMSG00000008411	CLASP1 (ENSMMSG00000008016) #23	TFCP2L1 (ENSMMSG00000007896) #24	GLI2 (ENSMMSG00000007820) #25	ENSMMSG00000007769	INHBB (ENSMMSG00000007756) #26	RALB (ENSMMSG00000007732) #27	TMEM185B (ENSMMSG00000007717) #28	EPB41L5 (ENSMMSG00000007581) #29	PTPN4 (ENSMMSG00000007520) #30	TMEM177 (ENSMMSG00000007502) #32	CFAP221 (ENSMMSG00000007401) #33	SCTR (ENSMMSG00000007312) #34	TMEM37 (ENSMMSG00000007278) #35	ENSMMSG00000007158 #36
Yarkand deer	MODERN SPECIES	26						ENSCHYG00000017612	ENSCHYG00000017571 #19	ENSCHYG00000017548	ENSCHYG00000017499	CNTNAP5 (ENSCHYG00000017268) #20	ENSCHYG00000017224	ENSCHYG00000017192	ENSCHYG00000017153	ENSCHYG00000017136	ENSCHYG00000016980 #21	NIFK (ENSCHYG00000016920) #22	ENSCHYG00000016875	CLASP1 (ENSCHYG00000015532) #23	TFCP2L1 (ENSCHYG00000015196) #24	ENSCHYG00000023259	ENSCHYG00000023235	GLI2 (ENSCHYG00000023139) #25	INHBB (ENSCHYG00000023113) #26	RALB (ENSCHYG00000023064) #27	TMEM185B (ENSCHYG00000023047) #28	ENSCHYG00000023024	EPB41L5 (ENSCHYG00000022604) #29	ENSCHYG00000022507	PTPN4 (ENSCHYG00000022126) #30	TMEM177 (ENSCHYG00000022080) #32	CFAP221 (ENSCHYG00000022009) #33
Camelidae	ANCESTRAL SPECIES	16	ENSGT00950000183074.C	ENSGT00940000156913.b	ENSGT00390000008042.A.b	ENSGT00390000015352 #37	ENSGT00940000154846.b.x #36	ENSGT00390000006225 #35	ENSGT00940000160618 #34	ENSGT00390000006925 #33	ENSGT00390000010354 #32	ENSGT00940000157211 #30	ENSGT00940000156332 #29	ENSGT00940000163000 #28	ENSGT00940000155984 #27	ENSGT00940000159862 #26	ENSGT00940000159213 #25	ENSGT00390000011515 #22	ENSGT00940000154817.b.b.b #23	ENSGT00940000159158 #24	ENSGT00940000153568.B #21	ENSGT00940000160532 #20	ENSGT00510000049102 #19	ENSGT01040000240615	ENSGT00950000182882.A.b.b #17	ENSGT00950000182905.a.b #16	ENSGT00390000002204 #15	ENSGT00940000156884 #14	ENSGT00940000154505.B #13	ENSGT00720000108834 #12	ENSGT00940000157247 #11	ENSGT01100000263537.b.a.a.b.a #10	ENSGT00940000153518.d.a #9
Arabian camel	MODERN SPECIES	31	MARCO (ENSCDRG00005013731)	C1QL2 (ENSCDRG00005013691)	STEAP3 (ENSCDRG00005013627)	ENSCDRG00005013521 #37	ENSCDRG00005013176 #36	TMEM37 (ENSCDRG00005013093) #35	SCTR (ENSCDRG00005012956) #34	CFAP221 (ENSCDRG00005012865) #33	ENSCDRG00005012821 #32	PTPN4 (ENSCDRG00005012679) #30	EPB41L5 (ENSCDRG00005012411) #29	TMEM185B (ENSCDRG00005012369) #28	RALB (ENSCDRG00005012300) #27	INHBB (ENSCDRG00005012251) #26	GLI2 (ENSCDRG00005011956) #25	NIFK (ENSCDRG00005011872) #22	CLASP1 (ENSCDRG00005011310) #23	TFCP2L1 (ENSCDRG00005011155) #24	TSN (ENSCDRG00005011006) #21	CNTNAP5 (ENSCDRG00005001221) #20	ENSCDRG00005000685 #19	ENSCDRG00005000635	BIN1 (ENSCDRG00005000151) #17	CYP27C1 (ENSCDRG00005004443) #16	ERCC3 (ENSCDRG00005004399) #15	MAP3K2 (ENSCDRG00005004344) #14	PROC (ENSCDRG00005004287) #13	IWS1 (ENSCDRG00005004147) #12	MYO7B (ENSCDRG00005003905) #11	GPR17 (ENSCDRG00005003850) #10	LIMS2 (ENSCDRG00005003791) #9
Alpaca	MODERN SPECIES	1256																NIFK (ENSVPAG00000005847) #22
Laurasiatheria_b	ANCESTRAL SPECIES	16	ENSGT00730000111130 #7	ENSGT00390000018525.b #8	ENSGT01100000263537.b.a.a.b.a #10	ENSGT00940000153518.d.a #9	ENSGT00940000157247 #11	ENSGT00720000108834 #12	ENSGT00940000154505.B #13	ENSGT00940000156884 #14	ENSGT00390000002204 #15	ENSGT00950000182905.a.b #16	ENSGT00950000182882.A.b.b #17	ENSGT01040000240615	ENSGT00510000049102 #19	ENSGT00940000160532 #20	ENSGT00940000153568.B #21	ENSGT00390000011515 #22	ENSGT00940000154817.b.b.b #23	ENSGT00940000159158 #24	ENSGT00940000159213 #25	ENSGT00910000148632	ENSGT00940000159862 #26	ENSGT00910000147009	ENSGT00940000155984 #27	ENSGT00940000163000 #28	ENSGT00940000156332 #29	ENSGT00940000157211 #30	ENSGT00390000010354 #32	ENSGT00390000006925 #33	ENSGT00940000165152	ENSGT00940000160618 #34	ENSGT00390000006225 #35
Carnivora	ANCESTRAL SPECIES	17	ENSGT00730000111130 #7	ENSGT00390000018525.b #8	ENSGT00940000153518.d.a #9	ENSGT01100000263537.b.a.a.b.a #10	ENSGT00940000157247 #11	ENSGT00720000108834 #12	ENSGT00940000154505.B #13	ENSGT00940000156884 #14	ENSGT00390000002204 #15	ENSGT00950000182905.a.b #16	ENSGT00950000182882.A.b.b #17	ENSGT01040000240615	ENSGT00510000049102 #19	ENSGT00940000160532 #20	ENSGT00940000153568.B #21	ENSGT00390000011515 #22	ENSGT00940000154817.b.b.b #23	ENSGT00940000159158 #24	ENSGT00910000148632	ENSGT00940000159213 #25	ENSGT00910000147009	ENSGT00940000159862 #26	ENSGT00940000155984 #27	ENSGT00940000163000 #28	ENSGT00940000156332 #29	ENSGT00940000157211 #30	ENSGT00390000010354 #32	ENSGT00390000006925 #33	ENSGT00940000165152	ENSGT00940000160618 #34	ENSGT00390000006225 #35
Caniformia	ANCESTRAL SPECIES	14	ENSGT00730000111130 #7	ENSGT00390000018525.b #8	ENSGT00940000153518.d.a #9	ENSGT01100000263537.b.a.a.b.a #10	ENSGT00940000157247 #11	ENSGT00720000108834 #12	ENSGT00940000154505.B #13	ENSGT00940000156884 #14	ENSGT00390000002204 #15	ENSGT00950000182905.a.b #16	ENSGT00950000182882.A.b.b #17	ENSGT01040000240615	ENSGT00510000049102 #19	ENSGT00940000160532 #20	ENSGT00940000153568.B #21	ENSGT00390000011515 #22	ENSGT00940000154817.b.b.b #23	ENSGT00940000159158 #24	ENSGT00940000159213 #25	ENSGT00910000148632	ENSGT00940000159862 #26	ENSGT00910000147009	ENSGT00940000155984 #27	ENSGT00940000163000 #28	ENSGT00940000156332 #29	ENSGT00940000157211 #30	ENSGT00390000010354 #32	ENSGT00390000006925 #33	ENSGT00940000165152	ENSGT00940000160618 #34	ENSGT00390000006225 #35
Caniformia_b	ANCESTRAL SPECIES	13	ENSGT00730000111130 #7	ENSGT00390000018525.b #8	ENSGT00940000153518.d.a #9	ENSGT01100000263537.b.a.a.b.a #10	ENSGT00940000157247 #11	ENSGT00720000108834 #12	ENSGT00940000154505.B #13	ENSGT00940000156884 #14	ENSGT00390000002204 #15	ENSGT00950000182905.a.b #16	ENSGT00950000182882.A.b.b #17	ENSGT01040000240615	ENSGT00510000049102 #19	ENSGT00940000160532 #20	ENSGT00940000153568.B #21	ENSGT00390000011515 #22	ENSGT00940000154817.b.b.b #23	ENSGT00940000159158 #24	ENSGT00940000159213 #25	ENSGT00940000159862 #26	ENSGT00910000147009	ENSGT00940000155984 #27	ENSGT00940000163000 #28	ENSGT00940000156332 #29	ENSGT00940000157211 #30	ENSGT00390000010354 #32	ENSGT00390000006925 #33	ENSGT00940000160618 #34	ENSGT00390000006225 #35	ENSGT00940000154846.b.s.a #36	ENSGT00390000015352 #37
Ursidae	ANCESTRAL SPECIES	7	ENSGT00730000111130 #7	ENSGT00390000018525.b #8	ENSGT00940000153518.d.a #9	ENSGT01100000263537.b.a.a.b.a #10	ENSGT00940000157247 #11	ENSGT00720000108834 #12	ENSGT00940000154505.B #13	ENSGT00940000156884 #14	ENSGT00390000002204 #15	ENSGT00950000182905.a.b #16	ENSGT00950000182882.A.b.b #17	ENSGT01040000240615	ENSGT00510000049102 #19	ENSGT00940000160532 #20	ENSGT00940000153568.B #21	ENSGT00390000011515 #22	ENSGT00940000154817.b.b.b #23	ENSGT00940000159158 #24	ENSGT00940000159213 #25	ENSGT00940000159862 #26	ENSGT00910000147009	ENSGT00940000155984 #27	ENSGT00940000163000 #28	ENSGT00940000156332 #29	ENSGT00940000157211 #30	ENSGT00390000010354 #32	ENSGT00390000006925 #33	ENSGT00940000160618 #34	ENSGT00390000006225 #35	ENSGT00940000154846.b.s.a #36	ENSGT00390000015352 #37
Ursus	ANCESTRAL SPECIES	135	ENSGT00390000004912	ENSGT00730000111130 #7	ENSGT00390000018525.b #8	ENSGT00940000153518.d.a #9	ENSGT01100000263537.b.a.a.b.a #10	ENSGT00940000157247 #11	ENSGT00720000108834 #12	ENSGT00390000018318.u.b.a.b.a.a.a	ENSGT00940000156884 #14	ENSGT00390000002204 #15	ENSGT00950000182905.a.b #16	ENSGT00950000182882.A.b.b #17	ENSGT00510000049102 #19	ENSGT00940000160532 #20	ENSGT00940000153568.B #21	ENSGT00390000011515 #22	ENSGT00940000154817.b.b.b #23	ENSGT00940000159158 #24	ENSGT00940000159213 #25	ENSGT00910000147009	ENSGT00940000155984 #27	ENSGT00940000163000 #28	ENSGT00940000156332 #29	ENSGT00940000157211 #30	ENSGT00390000010354 #32	ENSGT00390000006925 #33	ENSGT00940000160618 #34	ENSGT00390000006225 #35	ENSGT00940000154846.b.s.a #36	ENSGT00390000015352 #37	ENSGT00390000008042.A.b
Polar bear	MODERN SPECIES	131	AMMECR1L (ENSUMAG00000008269)	POLR2D (ENSUMAG00000008280)	WDR33 (ENSUMAG00000008286) #7	LIMS2 (ENSUMAG00000008302) #9	GPR17 (ENSUMAG00000008303) #10	MYO7B (ENSUMAG00000008309) #11	IWS1 (ENSUMAG00000008344) #12	ENSUMAG00000008348	MAP3K2 (ENSUMAG00000008354) #14	ERCC3 (ENSUMAG00000008361) #15	CYP27C1 (ENSUMAG00000008369) #16	BIN1 (ENSUMAG00000008385) #17	ENSUMAG00000008433 #19	CNTNAP5 (ENSUMAG00000008471) #20	TSN (ENSUMAG00000008516) #21	NIFK (ENSUMAG00000008522) #22	CLASP1 (ENSUMAG00000008949) #23	ENSUMAG00000013043	TFCP2L1 (ENSUMAG00000013047) #24	ENSUMAG00000013070 #25	ENSUMAG00000013082	RALB (ENSUMAG00000013087) #27	ENSUMAG00000013089 #28	ENSUMAG00000013094 #29	ENSUMAG00000013111 #29	PTPN4 (ENSUMAG00000013175) #30	TMEM177 (ENSUMAG00000013198) #32	CFAP221 (ENSUMAG00000013203) #33	SCTR (ENSUMAG00000013215) #34	ENSUMAG00000013219 #35	ENSUMAG00000013220 #36
American black bear	MODERN SPECIES	5377															TSN (ENSUAMG00000021618) #21	NIFK (ENSUAMG00000021620) #22	ENSUAMG00000021625 ##23
Giant Panda	MODERN SPECIES	11	ENSAMEG00000018568 #8	LIMS2 (ENSAMEG00000011796) #9	GPR17 (ENSAMEG00000018569) #10	MYO7B (ENSAMEG00000011843) #11	IWS1 (ENSAMEG00000011927) #12	PROC (ENSAMEG00000016798) #13	MAP3K2 (ENSAMEG00000016823) #14	ERCC3 (ENSAMEG00000016840) #15	CYP27C1 (ENSAMEG00000016884) #16	BIN1 (ENSAMEG00000016907) #17	ENSAMEG00000026539	ENSAMEG00000006242 #19	CNTNAP5 (ENSAMEG00000008823) #20	ENSAMEG00000028747	TSN (ENSAMEG00000005055) #21	NIFK (ENSAMEG00000005074) #22	CLASP1 (ENSAMEG00000005084) #23	ENSAMEG00000005208	TFCP2L1 (ENSAMEG00000005284) #24	GLI2 (ENSAMEG00000008708) #25	INHBB (ENSAMEG00000008695) #26	ENSAMEG00000029337	RALB (ENSAMEG00000008682) #27	TMEM185B (ENSAMEG00000018858) #28	ENSAMEG00000008640 #29	ENSAMEG00000027265 #29	PTPN4 (ENSAMEG00000008588) #30	CFAP221 (ENSAMEG00000008585) #33	SCTR (ENSAMEG00000008518) #34	TMEM37 (ENSAMEG00000018844) #35	DBI (ENSAMEG00000008509) #36
Mustelinae	ANCESTRAL SPECIES	151														ENSGT00940000160532 #20	ENSGT00940000153568.B #21	ENSGT00390000011515 #22	ENSGT00940000154817.b.b.b #23	ENSGT00940000159158 #24	ENSGT00940000159213 #25	ENSGT00940000159862 #26	ENSGT00940000155984 #27	ENSGT00940000163000 #28	ENSGT00940000156332 #29	ENSGT00940000157211 #30	ENSGT00390000010354 #32	ENSGT00390000006925 #33	ENSGT00940000160618 #34	ENSGT00390000006225 #35	ENSGT00940000154846.b.t #36	ENSGT00390000015352 #37	ENSGT00390000008042.A.b
Ferret	MODERN SPECIES	234													CNTNAP5 (ENSMPUG00000001059) #20	ENSMPUG00000018519	TSN (ENSMPUG00000001056) #21	NIFK (ENSMPUG00000001052) #22	CLASP1 (ENSMPUG00000001042) #23	ENSMPUG00000001050	ENSMPUG00000001040	TFCP2L1 (ENSMPUG00000001036) #24	GLI2 (ENSMPUG00000000986) #25	INHBB (ENSMPUG00000018514) #26	RALB (ENSMPUG00000000983) #27	TMEM185B (ENSMPUG00000018510) #28	EPB41L5 (ENSMPUG00000000976) #29	ENSMPUG00000000973	PTPN4 (ENSMPUG00000000967) #30	ENSMPUG00000000963	TMEM177 (ENSMPUG00000018507) #32	CFAP221 (ENSMPUG00000000958) #33	SCTR (ENSMPUG00000000956) #34
American mink	MODERN SPECIES	517															TSN (ENSNVIG00000023553) #21	NIFK (ENSNVIG00000023556) #22
Canidae	ANCESTRAL SPECIES	56	ENSGT00390000004912	ENSGT00730000111130 #7	ENSGT00390000018525.b #8	ENSGT00940000153518.d.a #9	ENSGT01100000263537.b.a.a.b.a #10	ENSGT00940000157247 #11	ENSGT00720000108834 #12	ENSGT00940000154505.B #13	ENSGT00940000156884 #14	ENSGT00390000002204 #15	ENSGT00950000182905.a.b #16	ENSGT00950000182882.A.b.b #17	ENSGT00510000049102 #19	ENSGT00940000160532 #20	ENSGT00940000153568.B #21	ENSGT00390000011515 #22	ENSGT00940000154817.b.b.b #23	ENSGT00940000159158 #24	ENSGT00940000159213 #25	ENSGT00910000148632	ENSGT00940000159862 #26	ENSGT00940000155984 #27	ENSGT00940000163000 #28	ENSGT00940000156332 #29	ENSGT00940000157211 #30	ENSGT00390000010354 #32	ENSGT00390000006925 #33	ENSGT00940000165152	ENSGT00940000160618 #34	ENSGT00390000006225 #35	ENSGT00940000154846.b.s.a.a #36
Canis_lupus	ANCESTRAL SPECIES	46	ENSGT00390000004912	ENSGT00730000111130 #7	ENSGT00390000018525.b #8	ENSGT00940000153518.d.a #9	ENSGT01100000263537.b.a.a.b.a #10	ENSGT00940000157247 #11	ENSGT00720000108834 #12	ENSGT00940000154505.B #13	ENSGT00940000156884 #14	ENSGT00390000002204 #15	ENSGT00950000182905.a.b #16	ENSGT00950000182882.A.b.b #17	ENSGT00510000049102 #19	ENSGT00950000182891.a.a.b.a.a.a.b.a.a.x.b	ENSGT00940000153568.B #21	ENSGT00390000011515 #22	ENSGT00940000154817.b.b.b #23	ENSGT00940000159158 #24	ENSGT00940000159213 #25	ENSGT00910000148632	ENSGT00940000159862 #26	ENSGT00940000155984 #27	ENSGT00940000163000 #28	ENSGT00940000156332 #29	ENSGT00940000157211 #30	ENSGT00390000010354 #32	ENSGT00390000006925 #33	ENSGT00940000165152	ENSGT00940000160618 #34	ENSGT00390000006225 #35	ENSGT00940000154846.b.s.a.a #36
Dog	MODERN SPECIES	10	PROC (ENSCAFG00845022381) #13	MAP3K2 (ENSCAFG00845022523) #14	ERCC3 (ENSCAFG00845022679) #15	CYP27C1 (ENSCAFG00845022851) #16	BIN1 (ENSCAFG00845023270) #17	ENSCAFG00845024436	ENSCAFG00845024580	GYPC (ENSCAFG00845024613) #19	ENSCAFG00845024641	ENSCAFG00845024678	ENSCAFG00845024766	CNTNAP5 (ENSCAFG00845024893) #20	ENSCAFG00845025188	ENSCAFG00845025240	TSN (ENSCAFG00845025322) #21	NIFK (ENSCAFG00845025461) #22	CLASP1 (ENSCAFG00845025721) #23	TFCP2L1 (ENSCAFG00845026654) #24	GLI2 (ENSCAFG00845026918) #25	ENSCAFG00845027051	INHBB (ENSCAFG00845027084) #26	RALB (ENSCAFG00845027115) #27	TMEM185B (ENSCAFG00845027210) #28	EPB41L5 (ENSCAFG00845027396) #29	PTPN4 (ENSCAFG00845028291) #30	CFAP221 (ENSCAFG00845028563) #33	SCTR (ENSCAFG00845028750) #34	DBI (ENSCAFG00845028816) #36	C2orf76 (ENSCAFG00845028896) #37	STEAP3 (ENSCAFG00845028945)	C1QL2 (ENSCAFG00845028993)
Dingo	MODERN SPECIES	101														ENSCAFG00020011742	TSN (ENSCAFG00020011747) #21	NIFK (ENSCAFG00020011751) #22	CLASP1 (ENSCAFG00020011811) #23	TFCP2L1 (ENSCAFG00020013694) #24	GLI2 (ENSCAFG00020013712) #25	ENSCAFG00020013755	INHBB (ENSCAFG00020013763) #26	RALB (ENSCAFG00020013768) #27	TMEM185B (ENSCAFG00020013775) #28	ENSCAFG00020013778	EPB41L5 (ENSCAFG00020013791) #29	PTPN4 (ENSCAFG00020013960) #30	TMEM177 (ENSCAFG00020014037) #32	ENSCAFG00020014038 #33	ENSCAFG00020014045	SCTR (ENSCAFG00020014048) #34	TMEM37 (ENSCAFG00020014053) #35
Red fox	MODERN SPECIES	140															TSN (ENSVVUG00000027555) #21	NIFK (ENSVVUG00000027544) #22	CLASP1 (ENSVVUG00000018857) #23	TFCP2L1 (ENSVVUG00000018476) #24	ENSVVUG00000018462	ENSVVUG00000018458 #25	INHBB (ENSVVUG00000018451) #26	RALB (ENSVVUG00000018448) #27	TMEM185B (ENSVVUG00000018446) #28	EPB41L5 (ENSVVUG00000018417) #29	PTPN4 (ENSVVUG00000018380) #30	TMEM177 (ENSVVUG00000018368) #32	CFAP221 (ENSVVUG00000018351) #33	SCTR (ENSVVUG00000018344) #34	TMEM37 (ENSVVUG00000018340) #35	DBI (ENSVVUG00000018337) #36	CUNH2orf76 (ENSVVUG00000018334) #37
Felidae	ANCESTRAL SPECIES	15	ENSGT00730000111130 #7	ENSGT00390000018525.b #8	ENSGT01100000263537.b.a.a.b.a #10	ENSGT00940000153518.d.a #9	ENSGT00940000157247 #11	ENSGT00720000108834 #12	ENSGT00940000154474.C	ENSGT00940000156884 #14	ENSGT00390000002204 #15	ENSGT00950000182905.a.b #16	ENSGT00950000182882.A.b.b #17	ENSGT01040000240615	ENSGT00510000049102.k #19	ENSGT00940000160532 #20	ENSGT00940000153568.B #21	ENSGT00390000011515 #22	ENSGT00940000154817.b.b.b #23	ENSGT00940000159158 #24	ENSGT00940000159213 #25	ENSGT00910000147009	ENSGT00940000159862 #26	ENSGT00940000155984 #27	ENSGT00940000163000 #28	ENSGT00940000156332 #29	ENSGT00940000157211 #30	ENSGT00390000010354 #32	ENSGT00390000006925 #33	ENSGT00940000165152	ENSGT00940000160618 #34	ENSGT00390000006225 #35	ENSGT00940000154846.b #36
Panthera	ANCESTRAL SPECIES	9	ENSGT00730000111130 #7	ENSGT00390000018525.b #8	ENSGT01100000263537.b.a.a.b.a #10	ENSGT00940000153518.d.a #9	ENSGT00940000157247 #11	ENSGT00720000108834 #12	ENSGT00940000154474.C	ENSGT00940000156884 #14	ENSGT00390000002204 #15	ENSGT00950000182905.a.b #16	ENSGT00950000182882.A.b.b #17	ENSGT01040000240615	ENSGT00510000049102.k #19	ENSGT00940000160532 #20	ENSGT00940000153568.B #21	ENSGT00390000011515 #22	ENSGT00940000154817.b.b.b #23	ENSGT00940000159158 #24	ENSGT00940000159213 #25	ENSGT00910000147009	ENSGT00940000159862 #26	ENSGT00940000155984 #27	ENSGT00940000163000 #28	ENSGT00940000156332 #29	ENSGT00940000157211 #30	ENSGT00390000010354 #32	ENSGT00390000006925 #33	ENSGT00940000165152	ENSGT00940000160618 #34	ENSGT00390000006225 #35	ENSGT00940000154846.b #36
Tiger	MODERN SPECIES	350															TSN (ENSPTIG00000012953) #21	NIFK (ENSPTIG00000012086) #22	CLASP1 (ENSPTIG00000011172) #23	TFCP2L1 (ENSPTIG00000009065) #24	GLI2 (ENSPTIG00000007707) #25	ENSPTIG00000007477	ENSPTIG00000006857	INHBB (ENSPTIG00000006658) #26	RALB (ENSPTIG00000006419) #27	TMEM185B (ENSPTIG00000005912) #28	EPB41L5 (ENSPTIG00000021414) #29	PTPN4 (ENSPTIG00000020865) #30	ENSPTIG00000020628 #32	CFAP221 (ENSPTIG00000019206) #33	SCTR (ENSPTIG00000017489) #34	TMEM37 (ENSPTIG00000016973) #35	DBI (ENSPTIG00000015369) #36
Panthera_a	ANCESTRAL SPECIES	6	ENSGT00730000111130 #7	ENSGT00390000018525.b #8	ENSGT01100000263537.b.a.a.b.a #10	ENSGT00940000153518.d.a #9	ENSGT00940000157247 #11	ENSGT00720000108834 #12	ENSGT00940000154505.B #13	ENSGT00940000156884 #14	ENSGT00390000002204 #15	ENSGT00950000182905.a.b #16	ENSGT00950000182882.A.b.b #17	ENSGT01040000240615	ENSGT00510000049102.k #19	ENSGT00940000160532 #20	ENSGT00940000153568.B #21	ENSGT00390000011515 #22	ENSGT00940000154817.b.b.b #23	ENSGT00940000159158 #24	ENSGT00940000159213 #25	ENSGT00910000147009	ENSGT00940000159862 #26	ENSGT00940000155984 #27	ENSGT00940000163000 #28	ENSGT00940000156332 #29	ENSGT00940000157211 #30	ENSGT00390000010354 #32	ENSGT00390000006925 #33	ENSGT00940000165152	ENSGT00940000160618 #34	ENSGT00390000006225 #35	ENSGT00940000154846.b #36
lion	MODERN SPECIES	8	WDR33 (ENSPLOG00000011926) #7	SFT2D3 (ENSPLOG00000011891) #8	GPR17 (ENSPLOG00000011875) #10	LIMS2 (ENSPLOG00000011652) #9	MYO7B (ENSPLOG00000011062) #11	IWS1 (ENSPLOG00000011017) #12	PROC (ENSPLOG00000010940) #13	MAP3K2 (ENSPLOG00000010899) #14	ERCC3 (ENSPLOG00000010687) #15	BIN1 (ENSPLOG00000010347) #17	ENSPLOG00000010142	ENSPLOG00000010117 #19	ENSPLOG00000010103	CNTNAP5 (ENSPLOG00000010011) #20	TSN (ENSPLOG00000009940) #21	NIFK (ENSPLOG00000009907) #22	CLASP1 (ENSPLOG00000009822) #23	TFCP2L1 (ENSPLOG00000009730) #24	GLI2 (ENSPLOG00000009554) #25	ENSPLOG00000009528	INHBB (ENSPLOG00000009508) #26	RALB (ENSPLOG00000009480) #27	TMEM185B (ENSPLOG00000009461) #28	EPB41L5 (ENSPLOG00000009400) #29	PTPN4 (ENSPLOG00000009251) #30	ENSPLOG00000009207 #32	CFAP221 (ENSPLOG00000009073) #33	SCTR (ENSPLOG00000008978) #34	TMEM37 (ENSPLOG00000008951) #35	DBI (ENSPLOG00000008854) #36	ENSPLOG00000008802 #37
leopard	MODERN SPECIES	55	WDR33 (ENSPPRG00000024620) #7	SFT2D3 (ENSPPRG00000017581) #8	GPR17 (ENSPPRG00000017623) #10	LIMS2 (ENSPPRG00000024028) #9	MYO7B (ENSPPRG00000023436) #11	IWS1 (ENSPPRG00000022934) #12	ENSPPRG00000000277	MAP3K2 (ENSPPRG00000001222) #14	ERCC3 (ENSPPRG00000001305) #15	CYP27C1 (ENSPPRG00000001706) #16	BIN1 (ENSPPRG00000004647) #17	ENSPPRG00000005191	ENSPPRG00000005298	CNTNAP5 (ENSPPRG00000006234) #20	TSN (ENSPPRG00000006531) #21	NIFK (ENSPPRG00000006683) #22	CLASP1 (ENSPPRG00000015636) #23	TFCP2L1 (ENSPPRG00000017348) #24	GLI2 (ENSPPRG00000020078) #25	ENSPPRG00000020367	INHBB (ENSPPRG00000021958) #26	RALB (ENSPPRG00000022423) #27	TMEM185B (ENSPPRG00000018302) #28	ENSPPRG00000000989	EPB41L5 (ENSPPRG00000001586) #29	PTPN4 (ENSPPRG00000002591) #30	ENSPPRG00000002685 #32	ENSPPRG00000002809 #33	ENSPPRG00000002848	SCTR (ENSPPRG00000003047) #34	TMEM37 (ENSPPRG00000003592) #35
Cat	MODERN SPECIES	239	SFT2D3 (ENSFCAG00000046065) #8	LIMS2 (ENSFCAG00000013177) #9	GPR17 (ENSFCAG00000013178) #10	MYO7B (ENSFCAG00000013176) #11	IWS1 (ENSFCAG00000009026) #12	ENSFCAG00000045272	ERCC3 (ENSFCAG00000006989) #15	CYP27C1 (ENSFCAG00000013628) #16	BIN1 (ENSFCAG00000000531) #17	ENSFCAG00000044901	ENSFCAG00000052078	ENSFCAG00000010478 #19	ENSFCAG00000032756	CNTNAP5 (ENSFCAG00000011127) #20	TSN (ENSFCAG00000027149) #21	NIFK (ENSFCAG00000010787) #22	CLASP1 (ENSFCAG00000012144) #23	TFCP2L1 (ENSFCAG00000012143) #24	ENSFCAG00000046390 #25	ENSFCAG00000050811 #25	INHBB (ENSFCAG00000042797) #26	RALB (ENSFCAG00000029390) #27	TMEM185B (ENSFCAG00000008734) #28	EPB41L5 (ENSFCAG00000022135) #29	PTPN4 (ENSFCAG00000018410) #30	ENSFCAG00000043605 #32	CFAP221 (ENSFCAG00000045807) #33	SCTR (ENSFCAG00000004432) #34	TMEM37 (ENSFCAG00000012415) #35	CC1H2orf76 (ENSFCAG00000004427) #37	DBI (ENSFCAG00000034130) #36
Laurasiatheria_c	ANCESTRAL SPECIES	18	ENSGT00390000018525.b #8	ENSGT01100000263537.b.a.a.b.a #10	ENSGT00940000153518.d.a #9	ENSGT00940000157247 #11	ENSGT00720000108834 #12	ENSGT00940000154505.B #13	ENSGT00940000154474.C	ENSGT00940000156884 #14	ENSGT00390000002204 #15	ENSGT00950000182905.a.b #16	ENSGT00950000182882.A.b.b #17	ENSGT01040000240615	ENSGT00510000049102 #19	ENSGT00940000160532 #20	ENSGT00940000153568.B #21	ENSGT00390000011515 #22	ENSGT00940000154817.b.b.b #23	ENSGT00940000159158 #24	ENSGT00940000159213 #25	ENSGT00910000148632	ENSGT00940000159862 #26	ENSGT00940000155984 #27	ENSGT00940000163000 #28	ENSGT00940000156332 #29	ENSGT00940000157211 #30	ENSGT00390000010354 #32	ENSGT00390000006925 #33	ENSGT00940000160618 #34	ENSGT00390000006225 #35	ENSGT00940000154846.b #36	ENSGT00390000015352 #37
Equus	ANCESTRAL SPECIES	18	ENSGT00730000111130 #7	ENSGT00390000018525.b #8	ENSGT01100000263537.b.a.a.b.a #10	ENSGT00940000153518.d.a #9	ENSGT00940000157247 #11	ENSGT00720000108834 #12	ENSGT00940000154474.C	ENSGT00940000156884 #14	ENSGT00390000002204 #15	ENSGT00950000182905.a.b #16	ENSGT00950000182882.A.b.b #17	ENSGT01040000240615	ENSGT00510000049102 #19	ENSGT00940000160532 #20	ENSGT00940000153568.B #21	ENSGT00390000011515 #22	ENSGT00940000154817.b.b.b #23	ENSGT00940000159158 #24	ENSGT00940000159213 #25	ENSGT00940000159862 #26	ENSGT00940000155984 #27	ENSGT00940000163000 #28	ENSGT00940000156332 #29	ENSGT00940000157211 #30	ENSGT00390000010354.h #32	ENSGT00390000010354.g.b #32	ENSGT00390000006925 #33	ENSGT00940000160618 #34	ENSGT00390000006225 #35	ENSGT00940000154846.b #36	ENSGT00390000015352 #37
Donkey	MODERN SPECIES	24	WDR33 (ENSEASG00005007112) #7	GPR17 (ENSEASG00005032583) #10	ENSEASG00005007130 #9	MYO7B (ENSEASG00005007148) #11	ENSEASG00005031355	ENSEASG00005007152 #12	ENSEASG00005022456	MAP3K2 (ENSEASG00005022464) #14	ERCC3 (ENSEASG00005022466) #15	CYP27C1 (ENSEASG00005022470) #16	BIN1 (ENSEASG00005022486) #17	ENSEASG00005028593	ENSEASG00005029070 #19	CNTNAP5 (ENSEASG00005004781) #20	ENSEASG00005027631 #21	ENSEASG00005004772 #22	ENSEASG00005035166	ENSEASG00005024571 #32	ENSEASG00005026482	ENSEASG00005034559 #33	ENSEASG00005031794 #32	ENSEASG00005014257 #23	ENSEASG00005015834 #24	ENSEASG00005031004	ENSEASG00005004049	ENSEASG00005029059 #32	ENSEASG00005037211 #32	ENSEASG00005024443 #32	PTPN4 (ENSEASG00005011727) #30	EPB41L5 (ENSEASG00005013008) #29	TMEM185B (ENSEASG00005013048) #28
Horse	MODERN SPECIES	9	PROC (ENSECAG00000016570) #13	ENSECAG00000047032	MAP3K2 (ENSECAG00000021505) #14	ERCC3 (ENSECAG00000006589) #15	CYP27C1 (ENSECAG00000017379) #16	BIN1 (ENSECAG00000006957) #17	ENSECAG00000032512	ENSECAG00000030979	ENSECAG00000044368 #19	ENSECAG00000047794	CNTNAP5 (ENSECAG00000017885) #20	ENSECAG00000056484	ENSECAG00000049622	ENSECAG00000044126	TSN (ENSECAG00000015930) #21	NIFK (ENSECAG00000018478) #22	ENSECAG00000052109 #23	CLASP1 (ENSECAG00000021391) #23	TFCP2L1 (ENSECAG00000024837) #24	ENSECAG00000051759	GLI2 (ENSECAG00000008016) #25	INHBB (ENSECAG00000014285) #26	RALB (ENSECAG00000014701) #27	TMEM185B (ENSECAG00000001439) #28	ENSECAG00000030484	EPB41L5 (ENSECAG00000052116) #29	ENSECAG00000053964	ENSECAG00000053729	PTPN4 (ENSECAG00000016313) #30	ENSECAG00000051098 #33	TMEM177 (ENSECAG00000005417) #32
Chiroptera	ANCESTRAL SPECIES	11															ENSGT00940000153568.B #21	ENSGT00390000011515 #22	ENSGT00940000154817.b.b.b.d #23	ENSGT00940000159158 #24	ENSGT00940000159213 #25	ENSGT00910000148632	ENSGT00940000159862 #26	ENSGT00940000155984 #27	ENSGT00940000163000 #28	ENSGT00940000156332 #29	ENSGT00940000157211 #30	ENSGT00390000010354 #32	ENSGT00390000006925 #33	ENSGT00940000160618 #34	ENSGT00390000006225 #35	ENSGT00940000154846.b #36	ENSGT00390000015352.m #37
Microchiroptera	ANCESTRAL SPECIES	15															ENSGT00940000153568.B #21	ENSGT00390000011515 #22	ENSGT00940000154817.b.b.b.d #23	ENSGT00940000159158 #24	ENSGT00940000159213 #25	ENSGT00910000148632	ENSGT00940000159862 #26	ENSGT00940000155984 #27	ENSGT00940000163000 #28	ENSGT00940000156332 #29	ENSGT00940000157211 #30	ENSGT00390000010354 #32	ENSGT00390000006925 #33	ENSGT00940000160618 #34	ENSGT00390000006225 #35	ENSGT00940000154846.b #36	ENSGT00390000015352.m #37
Greater horseshoe bat	MODERN SPECIES	26										ENSRFEG00010008850	ENSRFEG00010008836	CNTNAP5 (ENSRFEG00010008810) #20	ENSRFEG00010008771 #19	ENSRFEG00010008615	TSN (ENSRFEG00010008503) #21	NIFK (ENSRFEG00010008466) #22	CLASP1 (ENSRFEG00010008277) #23	TFCP2L1 (ENSRFEG00010008100) #24	ENSRFEG00010008082 #25	ENSRFEG00010008049	ENSRFEG00010008026 #25	INHBB (ENSRFEG00010007950) #26	RALB (ENSRFEG00010007895) #27	TMEM185B (ENSRFEG00010007871) #28	EPB41L5 (ENSRFEG00010007790) #29	PTPN4 (ENSRFEG00010007725) #30	ENSRFEG00010007679 #32	ENSRFEG00010007146	ENSRFEG00010007078	CFAP221 (ENSRFEG00010007006) #33	SCTR (ENSRFEG00010006931) #34
Microbat	MODERN SPECIES	1469															TSN (ENSMLUG00000012656) #21	NIFK (ENSMLUG00000006481) #22	ENSMLUG00000013252 #23	TFCP2L1 (ENSMLUG00000002967) #24
Megabat	MODERN SPECIES	8240															TSN (ENSPVAG00000016702) #21	NIFK (ENSPVAG00000016707) #22
Eulipotyphla	ANCESTRAL SPECIES																	ENSGT00390000011515 #22
Hedgehog	MODERN SPECIES	4980																ENSEEUG00000008535 #22
Common shrew	MODERN SPECIES	3852																NIFK (ENSSARG00000006252) #22
Atlantogenata	ANCESTRAL SPECIES	134	ENSGT00440000037733	ENSGT00390000010397.b	ENSGT00390000004912	ENSGT00730000111130 #7	ENSGT00390000018525.b #8	ENSGT00940000153518.d.a #9	ENSGT01100000263537.b.a.a.b.a #10	ENSGT00940000157247 #11	ENSGT00720000108834 #12	ENSGT00940000154505.B #13	ENSGT00940000156884 #14	ENSGT00390000002204 #15	ENSGT00950000182882.A.b.b #17	ENSGT00510000049102 #19	ENSGT00940000153568.B #21	ENSGT00390000011515 #22	ENSGT00940000154817.b.b.b #23	ENSGT00940000159158 #24
Afrotheria	ANCESTRAL SPECIES	158	ENSGT00390000010397.b	ENSGT00390000004912	ENSGT00730000111130 #7	ENSGT00390000018525.b #8	ENSGT00940000153518.d.a #9	ENSGT01100000263537.b.a.a.b.a #10	ENSGT00940000157247 #11	ENSGT00720000108834 #12	ENSGT00940000154474.C	ENSGT00940000156884 #14	ENSGT00390000002204 #15	ENSGT00950000182882.A.b.b #17	ENSGT00510000049102 #19	ENSGT00940000160532 #20	ENSGT00940000153568.B #21	ENSGT00390000011515 #22	ENSGT00940000154817.b.b.b #23	ENSGT00940000159158 #24
Tenrec	MODERN SPECIES	7336															ENSETEG00000006008	ENSETEG00000006007 #22
Afrotheria_a	ANCESTRAL SPECIES	159	ENSGT00390000010397.b	ENSGT00390000004912	ENSGT00730000111130 #7	ENSGT00390000018525.b #8	ENSGT00940000153518.d.a #9	ENSGT01100000263537.b.a.a.b.a #10	ENSGT00940000157247 #11	ENSGT00720000108834 #12	ENSGT00940000154474.C	ENSGT00940000156884 #14	ENSGT00390000002204 #15	ENSGT00950000182882.A.b.b #17	ENSGT00510000049102 #19	ENSGT00940000160532 #20	ENSGT00940000153568.B #21	ENSGT00390000011515 #22	ENSGT00940000154817.b.b.b #23	ENSGT00940000159158 #24
Elephant	MODERN SPECIES	408	AMMECR1L (ENSLAFG00000001849)	POLR2D (ENSLAFG00000001848)	WDR33 (ENSLAFG00000011749) #7	LIMS2 (ENSLAFG00000030188) #9	GPR17 (ENSLAFG00000032587) #10	MYO7B (ENSLAFG00000010345) #11	IWS1 (ENSLAFG00000013300) #12	ENSLAFG00000017941	MAP3K2 (ENSLAFG00000005303) #14	ERCC3 (ENSLAFG00000014866) #15	BIN1 (ENSLAFG00000032457) #17	ENSLAFG00000017022 #19	ENSLAFG00000025829	CNTNAP5 (ENSLAFG00000005223) #20	TSN (ENSLAFG00000032428) #21	NIFK (ENSLAFG00000030731) #22	CLASP1 (ENSLAFG00000005805) #23	TFCP2L1 (ENSLAFG00000006873) #24	CCDC115 (ENSLAFG00000013284)	IMP4 (ENSLAFG00000011558)	PTPN18 (ENSLAFG00000013290)	ENSLAFG00000006015	ENSLAFG00000031058	AMER3 (ENSLAFG00000027072)	ENSLAFG00000023345	FAM168B (ENSLAFG00000006185)	ENSLAFG00000030043	ENSLAFG00000027262	ENSLAFG00000026656
Hyrax	MODERN SPECIES	4079																ENSPCAG00000016241 #22
Xenarthra	ANCESTRAL SPECIES	1411															ENSGT00940000153568.B #21	ENSGT00390000011515 #22	ENSGT00940000154817.b.a ##23
Sloth	MODERN SPECIES	12896																NIFK (ENSCHOG00000002227) #22
Armadillo	DUPLICATION
Armadillo	DUPLICATION
Armadillo	MODERN SPECIES	1758														ENSDNOG00000047033	TSN (ENSDNOG00000025740) #21	ENSDNOG00000005017 #22	ENSDNOG00000039077 ##23	ENSDNOG00000034971	CLASP1 (ENSDNOG00000012181) #23
Armadillo	MODERN SPECIES	3047																ENSDNOG00000046092 #22	ENSDNOG00000043316
Armadillo	MODERN SPECIES	1110									BASP1 (ENSDNOG00000035443)	MYO10 (ENSDNOG00000004469)	RETREG1 (ENSDNOG00000018975)	ZNF622 (ENSDNOG00000035990)	ENSDNOG00000031427	FBXL7 (ENSDNOG00000049796)	ENSDNOG00000040727	ENSDNOG00000039978 #22	ACVR1C (ENSDNOG00000004277)	CYTIP (ENSDNOG00000049227)	ERMN (ENSDNOG00000040595)	GALNT5 (ENSDNOG00000033007)	GPD2 (ENSDNOG00000009348)	NR4A2 (ENSDNOG00000031336)	ENSDNOG00000040257	ENSDNOG00000045432
Marsupialia	ANCESTRAL SPECIES	5	ENSGT00390000018525.b #8	ENSGT01100000263537.b.a.a.b.a #10	ENSGT00940000153518.d.a #9	ENSGT00940000166878	ENSGT00940000157247 #11	ENSGT00720000108834 #12	ENSGT00940000165072	ENSGT00940000154505.B #13	ENSGT00940000156884 #14	ENSGT00390000002204 #15	ENSGT00950000182905.a.b #16	ENSGT00950000182882.A.b.b #17	ENSGT00510000049102 #19	ENSGT00940000160532 #20	ENSGT00940000153568.B #21	ENSGT00390000011515 #22	ENSGT00940000154817.b.b.b #23	ENSGT00940000159158 #24	ENSGT00940000159213 #25	ENSGT00940000159862 #26	ENSGT00940000155984 #27	ENSGT00940000156332 #29	ENSGT00940000157211 #30	ENSGT01100000263517.b.d.m.a.a.a.b	ENSGT00390000006925 #33	ENSGT00940000178790	ENSGT00940000160618 #34	ENSGT00390000006225 #35	ENSGT00940000154846.b #36	ENSGT00390000015352 #37	ENSGT00390000008042.A.b
Opossum	DUPLICATION
Opossum	MODERN SPECIES		ENSMODG00000009286	GRK5 (ENSMODG00000009266)	ENSMODG00000024855	RGS10 (ENSMODG00000047360)	ENSMODG00000008865	BAG3 (ENSMODG00000008764)	INPP5F (ENSMODG00000008751)	MCMBP (ENSMODG00000008714)	SEC23IP (ENSMODG00000008685)	ENSMODG00000038446	PLPP4 (ENSMODG00000008644)	ENSMODG00000008634	ENSMODG00000039409	WDR11 (ENSMODG00000008627)	FGFR2 (ENSMODG00000008525)	ENSMODG00000008447 #22	ENSMODG00000036472	ENSMODG00000044877	ATE1 (ENSMODG00000008434)	ENSMODG00000008405	ENSMODG00000008327	ENSMODG00000038482	BTBD16 (ENSMODG00000008285)	PLEKHA1 (ENSMODG00000008263)	HTRA1 (ENSMODG00000008235)	ENSMODG00000008170	ENSMODG00000007900	ENSMODG00000007895	ENSMODG00000040843	CUZD1 (ENSMODG00000007863)	C10orf88 (ENSMODG00000007814)
Opossum	MODERN SPECIES	3	PROC (ENSMODG00000018683) #13	ENSMODG00000028395	MAP3K2 (ENSMODG00000018690) #14	ERCC3 (ENSMODG00000018695) #15	CYP27C1 (ENSMODG00000018698) #16	BIN1 (ENSMODG00000018719) #17	ENSMODG00000041460 #19	ENSMODG00000041329	ENSMODG00000024937	ENSMODG00000048976	CNTNAP5 (ENSMODG00000000099) #20	ENSMODG00000037432	ENSMODG00000039717	ENSMODG00000027466	ENSMODG00000000147 #21	ENSMODG00000000152 #22	CLASP1 (ENSMODG00000000193) #23	TFCP2L1 (ENSMODG00000000229) #24	GLI2 (ENSMODG00000000245) #25	INHBB (ENSMODG00000042727) #26	RALB (ENSMODG00000000264) #27	EPB41L5 (ENSMODG00000028489) #29	PTPN4 (ENSMODG00000000325) #30	ENSMODG00000039980	ENSMODG00000000345	ENSMODG00000000333	CFAP221 (ENSMODG00000000351) #33	SCTR (ENSMODG00000000380) #34	ENSMODG00000000382 #35	DBI (ENSMODG00000000393) #36	C2orf76 (ENSMODG00000043798) #37
Marsupialia_b	ANCESTRAL SPECIES	3	ENSGT00730000111130 #7	ENSGT00390000018525.b #8	ENSGT01100000263537.b.a.a.b.a #10	ENSGT00940000153518.d.a #9	ENSGT00940000157247 #11	ENSGT00720000108834 #12	ENSGT00940000165072	ENSGT00940000154505.B #13	ENSGT00940000156884 #14	ENSGT00390000002204 #15	ENSGT00950000182905.a.b #16	ENSGT00950000182882.A.b.b #17	ENSGT00510000049102 #19	ENSGT00940000160532 #20	ENSGT00940000153568.B #21	ENSGT00390000011515 #22	ENSGT00940000154817.b.b.b #23	ENSGT00940000159158 #24	ENSGT00940000159213 #25	ENSGT00940000159862 #26	ENSGT00940000155984 #27	ENSGT00940000156332 #29	ENSGT00940000157211 #30	ENSGT01100000263517.b.d.m.a.a.a.b	ENSGT00390000006925 #33	ENSGT00940000178790	ENSGT00940000160618 #34	ENSGT00390000006225 #35	ENSGT00940000154846.b #36	ENSGT00390000015352 #37	ENSGT00390000008042.A.b
Tasmanian devil	MODERN SPECIES	2	SFT2D3 (ENSSHAG00000032271) #8	LIMS2 (ENSSHAG00000006129) #9	GPR17 (ENSSHAG00000027196) #10	ENSSHAG00000001977	IWS1 (ENSSHAG00000001665) #12	PROC (ENSSHAG00000021253) #13	MAP3K2 (ENSSHAG00000006267) #14	ERCC3 (ENSSHAG00000007423) #15	CYP27C1 (ENSSHAG00000008122) #16	BIN1 (ENSSHAG00000030412) #17	ENSSHAG00000024800 #19	ENSSHAG00000030206	CNTNAP5 (ENSSHAG00000003854) #20	ENSSHAG00000002654	TSN (ENSSHAG00000011707) #21	NIFK (ENSSHAG00000011786) #22	CLASP1 (ENSSHAG00000012473) #23	TFCP2L1 (ENSSHAG00000013877) #24	GLI2 (ENSSHAG00000004233) #25	INHBB (ENSSHAG00000025885) #26	RALB (ENSSHAG00000012747) #27	EPB41L5 (ENSSHAG00000013685) #29	PTPN4 (ENSSHAG00000027373) #30	ENSSHAG00000015612	CFAP221 (ENSSHAG00000015680) #33	SCTR (ENSSHAG00000016070) #34	TMEM37 (ENSSHAG00000024776) #35	ENSSHAG00000025578 #36	C2orf76 (ENSSHAG00000025069) #37	STEAP3 (ENSSHAG00000016635)	C1QL2 (ENSSHAG00000025877)
Diprotodontia	ANCESTRAL SPECIES	66	ENSGT00390000018525.b #8	ENSGT01100000263537.b.a.a.b.a #10	ENSGT00940000153518.d.a #9	ENSGT00940000157247 #11	ENSGT00720000108834 #12	ENSGT00940000165072	ENSGT00940000154505.B #13	ENSGT00940000154474.C	ENSGT00940000156884 #14	ENSGT00390000002204 #15	ENSGT00950000182905.a.b #16	ENSGT00950000182882.A.b.b #17	ENSGT00510000049102 #19	ENSGT00940000160532 #20	ENSGT00940000153568.B #21	ENSGT00390000011515 #22	ENSGT00940000154817.b.b.b #23	ENSGT00940000159158 #24	ENSGT00940000159213 #25	ENSGT00940000159862 #26	ENSGT00940000155984 #27	ENSGT00940000156332 #29	ENSGT00940000157211 #30	ENSGT01100000263517.b.d.m.a.a.a.b	ENSGT00390000006925 #33	ENSGT00940000178790	ENSGT00940000160618 #34	ENSGT00390000006225 #35	ENSGT00940000154846.b.f #36	ENSGT00390000015352 #37	ENSGT00390000008042.A.b
Wallaby	MODERN SPECIES	6083																ENSMEUG00000001680 #22
Diprotodontia_a	ANCESTRAL SPECIES	63	ENSGT00390000018525.b #8	ENSGT01100000263537.b.a.a.b.a #10	ENSGT00940000153518.d.a #9	ENSGT00940000157247 #11	ENSGT00720000108834 #12	ENSGT00940000165072	ENSGT00940000154505.B #13	ENSGT00940000154474.C	ENSGT00940000156884 #14	ENSGT00390000002204 #15	ENSGT00950000182905.a.b #16	ENSGT00950000182882.A.b.b #17	ENSGT00510000049102 #19	ENSGT00940000160532 #20	ENSGT00940000153568.B #21	ENSGT00390000011515 #22	ENSGT00940000154817.b.b.b #23	ENSGT00940000159158 #24	ENSGT00940000159213 #25	ENSGT00940000159862 #26	ENSGT00940000155984 #27	ENSGT00940000156332 #29	ENSGT00940000157211 #30	ENSGT01100000263517.b.d.m.a.a.a.b	ENSGT00390000006925 #33	ENSGT00940000178790	ENSGT00940000160618 #34	ENSGT00390000006225 #35	ENSGT00940000154846.b.f #36	ENSGT00390000015352 #37	ENSGT00390000008042.A.b
koala	MODERN SPECIES	142													CNTNAP5 (ENSPCIG00000017252) #20	ENSPCIG00000035895	TSN (ENSPCIG00000023491) #21	NIFK (ENSPCIG00000028743) #22	CLASP1 (ENSPCIG00000027831) #23	TFCP2L1 (ENSPCIG00000027847) #24	GLI2 (ENSPCIG00000027851) #25	ENSPCIG00000000246	ENSPCIG00000036246	INHBB (ENSPCIG00000033614) #26	RALB (ENSPCIG00000001367) #27	EPB41L5 (ENSPCIG00000001254) #29	PTPN4 (ENSPCIG00000001209) #30	ENSPCIG00000029979	CFAP221 (ENSPCIG00000029975) #33	ENSPCIG00000033707	SCTR (ENSPCIG00000031644) #34	TMEM37 (ENSPCIG00000002445) #35	DBI (ENSPCIG00000025866) #36
Common wonbat	MODERN SPECIES	669	ENSVURG00010012153	IWS1 (ENSVURG00010012124) #12	ENSVURG00010012108	ENSVURG00010012095	MAP3K2 (ENSVURG00010012081) #14	ERCC3 (ENSVURG00010012067) #15	CYP27C1 (ENSVURG00010012054) #16	BIN1 (ENSVURG00010012015) #17	ENSVURG00010012006 #19	ENSVURG00010012001	ENSVURG00010011993	CNTNAP5 (ENSVURG00010011758) #20	ENSVURG00010011720	ENSVURG00010011718	TSN (ENSVURG00010011706) #21	NIFK (ENSVURG00010011696) #22	ENSVURG00010011690	CLASP1 (ENSVURG00010011624) #23	TFCP2L1 (ENSVURG00010011605) #24	GLI2 (ENSVURG00010011574) #25	INHBB (ENSVURG00010011559) #26	RALB (ENSVURG00010011553) #27	EPB41L5 (ENSVURG00010011543) #29	PTPN4 (ENSVURG00010011502) #30	ENSVURG00010011482	CFAP221 (ENSVURG00010011419) #33	SCTR (ENSVURG00010011391) #34	TMEM37 (ENSVURG00010011386) #35	ENSVURG00010011379 #36	C2orf76 (ENSVURG00010011371) #37	STEAP3 (ENSVURG00010011355)
Platypus	MODERN SPECIES		MSL2 (ENSOANG00000044917)	PCCB (ENSOANG00000047683)	STAG1 (ENSOANG00000004382)	SLC35G2 (ENSOANG00000007966)	NCK1 (ENSOANG00000049693)	IL20RB (ENSOANG00000049139)	SOX14 (ENSOANG00000042295)	CLDN18 (ENSOANG00000049325)	ENSOANG00000036526	A4GNT (ENSOANG00000005279)	DBR1 (ENSOANG00000007783)	ARMC8 (ENSOANG00000015678)	NME9 (ENSOANG00000015676)	ENSOANG00000037109	TSN (ENSOANG00000039726) #21	ENSOANG00000047221 #22	CLASP1 (ENSOANG00000007589) #23	TFCP2L1 (ENSOANG00000007591) #24	GLI2 (ENSOANG00000048401) #25	INHBB (ENSOANG00000042798) #26	RALB (ENSOANG00000005641) #27	ENSOANG00000039667	EPB41L5 (ENSOANG00000012068) #29	PTPN4 (ENSOANG00000012067) #30	MRAS (ENSOANG00000007543)	CNTNAP5 (ENSOANG00000013116) #20	ENSOANG00000048973 #19	BIN1 (ENSOANG00000048048) #17	CYP27C1 (ENSOANG00000047580) #16	ERCC3 (ENSOANG00000046724) #15	MAP3K2 (ENSOANG00000041392) #14
Sauria	ANCESTRAL SPECIES		ENSGT00390000017916	ENSGT00950000183570	ENSGT00940000157879	ENSGT00530000062962.a.a	ENSGT00940000158054	ENSGT00940000158470	ENSGT00940000156797	ENSGT00940000156712	ENSGT01030000234625.D	ENSGT00940000159893	ENSGT00940000156507	ENSGT00390000017724.a.b	ENSGT00390000002188	ENSGT00940000164632.a	ENSGT00940000153568.B #21	ENSGT00390000011515 #22	ENSGT00940000154817.b.b.b #23	ENSGT00940000159158 #24	ENSGT00940000159213 #25	ENSGT00940000159862 #26	ENSGT00940000155984 #27	ENSGT00940000165735	ENSGT00960000190080	ENSGT00940000156332 #29	ENSGT00940000157211 #30	ENSGT00940000164607	ENSGT00390000010354 #32	ENSGT00940000156353	ENSGT00940000160228	ENSGT00940000160532 #20	ENSGT00510000049102 #19
Lepidosauria	ANCESTRAL SPECIES	7	ENSGT00940000156832	ENSGT00950000183570	ENSGT00940000157879	ENSGT00530000062962.a.a	ENSGT00940000158054	ENSGT00940000158470	ENSGT00940000156797	ENSGT00940000156712	ENSGT01030000234625.D	ENSGT00940000159893	ENSGT00940000156507	ENSGT00390000017724.a.b	ENSGT00390000002188	ENSGT00940000164632.a	ENSGT00940000153568.B #21	ENSGT00390000011515 #22	ENSGT00940000154817.b.b.b #23	ENSGT00940000159158 #24	ENSGT00940000159213 #25	ENSGT00940000159862 #26	ENSGT00940000155984 #27	ENSGT00940000165735	ENSGT00960000190080	ENSGT00940000156332 #29	ENSGT00940000157211 #30	ENSGT00940000164607	ENSGT00390000010354 #32	ENSGT00940000156353	ENSGT00940000160532 #20	ENSGT00510000049102 #19	ENSGT00950000182882.A.b.b #17
Episquamata	ANCESTRAL SPECIES	2	ENSGT00950000182899.C.a	ENSGT00940000156941	ENSGT00940000154552	ENSGT00940000156162.C	ENSGT00940000160614	ENSGT00940000154384	ENSGT00950000183189.a.b.a	ENSGT00390000015010	ENSGT00960000190572	ENSGT00390000013701	ENSGT00940000155931	ENSGT00940000157401	ENSGT00390000009980	ENSGT00390000002837	ENSGT00940000156305	ENSGT00390000011515 #22	ENSGT01000000214413.b.a.a	ENSGT00390000013727.d	ENSGT00940000156335	ENSGT01030000235369	ENSGT00940000155531.b	ENSGT00730000111202	ENSGT00950000183039.B.b.a	ENSGT00940000153421.a.b	ENSGT01030000234598.a.b	ENSGT00940000155789	ENSGT00390000015332	ENSGT00940000156299	ENSGT00940000156699	ENSGT01070000253816.b	ENSGT01100000263484.C.b.a
Toxicofera	ANCESTRAL SPECIES	2	ENSGT00950000182899.C.a	ENSGT00940000156941	ENSGT00940000154552	ENSGT00940000156162.C	ENSGT00940000160614	ENSGT00940000154384	ENSGT00950000183189.a.b.a	ENSGT00390000015010	ENSGT00960000190572	ENSGT00390000013701	ENSGT00940000155931	ENSGT00940000157401	ENSGT00390000009980	ENSGT00390000002837	ENSGT00940000156305	ENSGT00390000011515 #22	ENSGT01000000214413.b.a.a	ENSGT00390000013727.d	ENSGT00940000156335	ENSGT01030000235369	ENSGT00940000155531.b	ENSGT00730000111202	ENSGT00950000183039.B.b.a	ENSGT00940000153421.a.b	ENSGT01030000234598.a.b	ENSGT00940000155789	ENSGT00390000015332	ENSGT00940000156299	ENSGT00940000156699	ENSGT01070000253816.b	ENSGT01100000263484.C.b.a
Elapidae	ANCESTRAL SPECIES	4	ENSGT00950000182899.C.a	ENSGT00940000156941	ENSGT00940000154552	ENSGT00940000156162.C	ENSGT00940000160614	ENSGT00940000154384	ENSGT00950000183189.a.b.a	ENSGT00390000015010	ENSGT00960000190572	ENSGT00390000013701	ENSGT00940000155931	ENSGT00940000157401	ENSGT00390000009980	ENSGT00390000002837	ENSGT00940000156305	ENSGT00390000011515 #22	ENSGT01000000214413.b.a.a	ENSGT00390000013727.d	ENSGT00940000156335	ENSGT01030000235369	ENSGT00940000155531.b	ENSGT00730000111202	ENSGT00390000006293.td	ENSGT00950000183039.B.b.a	ENSGT00940000153421.a.b	ENSGT01030000234598.a.b	ENSGT00940000155789	ENSGT00390000015332	ENSGT00940000156299	ENSGT00940000156699	ENSGT01070000253816.b
Indian cobra	MODERN SPECIES	3	ENSNNAG00000011193	MCCC1 (ENSNNAG00000011141)	DCUN1D1 (ENSNNAG00000011093)	ATP11B (ENSNNAG00000010604)	SOX2 (ENSNNAG00000010554)	DNAJC19 (ENSNNAG00000010510)	FXR1 (ENSNNAG00000008767)	CCDC39 (ENSNNAG00000008649)	ENSNNAG00000008598	TTC14 (ENSNNAG00000008565)	PEX5L (ENSNNAG00000008347)	USP13 (ENSNNAG00000008293)	NDUFB5 (ENSNNAG00000008239)	MRPL47 (ENSNNAG00000008025)	ACTL6A (ENSNNAG00000007971)	NIFK (ENSNNAG00000007941) #22	GNB4 (ENSNNAG00000007920)	MFN1 (ENSNNAG00000007861)	ZNF639 (ENSNNAG00000007836)	PIK3CA (ENSNNAG00000007680)	ZMAT3 (ENSNNAG00000007645)	ENSNNAG00000007631	ENSNNAG00000007595	KCNMB2 (ENSNNAG00000016680)	TBL1XR1 (ENSNNAG00000016658)	NAALADL2 (ENSNNAG00000016653)	NLGN1 (ENSNNAG00000016645)	SPATA16 (ENSNNAG00000016632)	ECT2 (ENSNNAG00000016490)	NCEH1 (ENSNNAG00000016440)	TNFSF10 (ENSNNAG00000016427)
Elapidae_a	ANCESTRAL SPECIES		ENSGT00950000182899.C.a	ENSGT00940000156941	ENSGT00940000154552	ENSGT00940000156162.C	ENSGT00940000160614	ENSGT00940000154384	ENSGT00950000183189.a.b.a	ENSGT00390000015010	ENSGT00960000190572	ENSGT00390000013701	ENSGT00940000155931	ENSGT00940000157401	ENSGT00390000009980	ENSGT00390000002837	ENSGT00940000156305	ENSGT00390000011515 #22	ENSGT01000000214413.b.a.a	ENSGT00390000013727.d	ENSGT00940000156335	ENSGT01030000235369	ENSGT00940000155531.b	ENSGT00730000111202	ENSGT00390000006293.td	ENSGT00950000183039.B.b.a	ENSGT00940000153421.a.b.u	ENSGT01030000234598.a.b	ENSGT00940000155789	ENSGT00390000015332	ENSGT00940000156299	ENSGT00940000156699	ENSGT01070000253816.b
Acanthophiinae	ANCESTRAL SPECIES	1	ENSGT00950000182899.C.a	ENSGT00940000156941	ENSGT00940000154552	ENSGT00940000156162.C	ENSGT00940000160614	ENSGT00940000154384	ENSGT00950000183189.a.b.a	ENSGT00390000015010	ENSGT00960000190572	ENSGT00390000013701	ENSGT00940000155931	ENSGT00940000157401	ENSGT00390000009980	ENSGT00390000002837	ENSGT00940000156305	ENSGT00390000011515 #22	ENSGT01000000214413.b.a.a	ENSGT00390000013727.d	ENSGT00940000156335	ENSGT01030000235369	ENSGT00940000155531.b	ENSGT00730000111202	ENSGT00390000006293.td	ENSGT00950000183039.B.b.a	ENSGT00940000153421.a.b.u	ENSGT01030000234598.a.b	ENSGT00940000155789	ENSGT00390000015332	ENSGT00940000156299	ENSGT00940000156699	ENSGT01070000253816.b
Eastern brown snake	MODERN SPECIES	29	MCCC1 (ENSPTXG00000017643)	DCUN1D1 (ENSPTXG00000017644)	ATP11B (ENSPTXG00000017645)	ENSPTXG00000017647	SOX2 (ENSPTXG00000017648)	DNAJC19 (ENSPTXG00000017649)	FXR1 (ENSPTXG00000017650)	ENSPTXG00000017651	ENSPTXG00000017653	TTC14 (ENSPTXG00000017654)	PEX5L (ENSPTXG00000017655)	USP13 (ENSPTXG00000017659)	NDUFB5 (ENSPTXG00000017750)	MRPL47 (ENSPTXG00000017751)	ACTL6A (ENSPTXG00000017752)	NIFK (ENSPTXG00000017754) #22	GNB4 (ENSPTXG00000017756)	MFN1 (ENSPTXG00000017761)	ZNF639 (ENSPTXG00000017805)	PIK3CA (ENSPTXG00000017806)	ZMAT3 (ENSPTXG00000017808)	KCNMB2 (ENSPTXG00000017809)	TBL1XR1 (ENSPTXG00000013314)	NAALADL2 (ENSPTXG00000013319)	NLGN1 (ENSPTXG00000013325)	SPATA16 (ENSPTXG00000013329)	ENSPTXG00000013331	ENSPTXG00000013332	NCEH1 (ENSPTXG00000013334)	TNFSF10 (ENSPTXG00000013335)	GHSR (ENSPTXG00000013337)
Mainland tiger snake	MODERN SPECIES							SOX2 (ENSNSUG00000004653)	DNAJC19 (ENSNSUG00000004600)	FXR1 (ENSNSUG00000004596)	CCDC39 (ENSNSUG00000004589)	TTC14 (ENSNSUG00000004573)	PEX5L (ENSNSUG00000004565)	USP13 (ENSNSUG00000004559)	NDUFB5 (ENSNSUG00000004556)	MRPL47 (ENSNSUG00000004553)	ACTL6A (ENSNSUG00000004551)	NIFK (ENSNSUG00000004538) #22	GNB4 (ENSNSUG00000004440)	MFN1 (ENSNSUG00000004432)	ZNF639 (ENSNSUG00000004427)	ENSNSUG00000004425	PIK3CA (ENSNSUG00000003932)	ZMAT3 (ENSNSUG00000003923)	ENSNSUG00000003919	KCNMB2 (ENSNSUG00000003916)	TBL1XR1 (ENSNSUG00000003899)	NAALADL2 (ENSNSUG00000003894)	NLGN1 (ENSNSUG00000003879)	ENSNSUG00000003867	ENSNSUG00000003858	SPATA16 (ENSNSUG00000003835)	ENSNSUG00000003831
Blue-lipped sea krait	MODERN SPECIES	3690													NDUFB5 (ENSLLTG00000007498)	MRPL47 (ENSLLTG00000007524)	ACTL6A (ENSLLTG00000007568)	NIFK (ENSLLTG00000007602) #22
Lizard	MODERN SPECIES	2	ENSACAG00000038324	ENSACAG00000040070	ENSACAG00000042518	DNAJC19 (ENSACAG00000003917)	FXR1 (ENSACAG00000003918)	CCDC39 (ENSACAG00000004063)	ENSACAG00000040084	ENSACAG00000044880	TTC14 (ENSACAG00000004108)	PEX5L (ENSACAG00000004210)	USP13 (ENSACAG00000004318)	NDUFB5 (ENSACAG00000004465)	MRPL47 (ENSACAG00000043862)	ACTL6A (ENSACAG00000004548)	ENSACAG00000044517	ENSACAG00000004655 #22	GNB4 (ENSACAG00000004667)	MFN1 (ENSACAG00000004702)	ZNF639 (ENSACAG00000044413)	PIK3CA (ENSACAG00000004872)	ZMAT3 (ENSACAG00000005005)	ENSACAG00000042133	KCNMB2 (ENSACAG00000005012)	ENSACAG00000036596	ENSACAG00000040731	ENSACAG00000041605	TBL1XR1 (ENSACAG00000013442)	ENSACAG00000037636	ENSACAG00000034977	NAALADL2 (ENSACAG00000029348)	ENSACAG00000041682
Laterata	ANCESTRAL SPECIES		ENSGT00940000159676	ENSGT00940000164015	ENSGT00940000156941	ENSGT00940000154552	ENSGT00940000156162.C	ENSGT00940000154384	ENSGT00950000183189.a.b.a	ENSGT00390000015010	ENSGT00960000190572	ENSGT00390000013701	ENSGT00940000155931	ENSGT00940000157401	ENSGT00390000009980	ENSGT00390000002837	ENSGT00940000156305	ENSGT00390000011515 #22	ENSGT01000000214413.b.a.a	ENSGT00390000013727.d	ENSGT00940000156335	ENSGT01030000235369	ENSGT00940000155531.b	ENSGT00730000111202	ENSGT00950000183039.B.b.a	ENSGT00940000153421.a.b	ENSGT01030000234598.a.b	ENSGT00940000155789	ENSGT00390000015332	ENSGT00940000156299	ENSGT00940000156699	ENSGT01070000253816.b	ENSGT01100000263484.C.b.a
Common wall lizard	MODERN SPECIES	13	ENSPMRG00000004385	ENSPMRG00000004270	ENSPMRG00000004232	DNAJC19 (ENSPMRG00000004217)	ENSPMRG00000004207	FXR1 (ENSPMRG00000004189)	CCDC39 (ENSPMRG00000004156)	ENSPMRG00000004145	PEX5L (ENSPMRG00000004041)	USP13 (ENSPMRG00000004010)	ENSPMRG00000004003	NDUFB5 (ENSPMRG00000003995)	ENSPMRG00000003984	ENSPMRG00000003959	ACTL6A (ENSPMRG00000003934)	NIFK (ENSPMRG00000003928) #22	ENSPMRG00000003923	GNB4 (ENSPMRG00000003918)	MFN1 (ENSPMRG00000003386)	ZNF639 (ENSPMRG00000003214)	ENSPMRG00000003204	PIK3CA (ENSPMRG00000003186)	ENSPMRG00000003168	ENSPMRG00000003165	ENSPMRG00000003152	KCNMB2 (ENSPMRG00000003126)	ENSPMRG00000003104	ENSPMRG00000003094	TBL1XR1 (ENSPMRG00000003048)	ENSPMRG00000003026	ENSPMRG00000003019
Argentine black and white tegu	MODERN SPECIES	21	MCCC1 (ENSSMRG00000023596)	DCUN1D1 (ENSSMRG00000023597)	ATP11B (ENSSMRG00000023598)	ENSSMRG00000023601	DNAJC19 (ENSSMRG00000023604)	FXR1 (ENSSMRG00000023605)	CCDC39 (ENSSMRG00000023606)	ENSSMRG00000023607	TTC14 (ENSSMRG00000023608)	ENSSMRG00000023609	PEX5L (ENSSMRG00000023610)	USP13 (ENSSMRG00000023611)	NDUFB5 (ENSSMRG00000023612)	MRPL47 (ENSSMRG00000023613)	ACTL6A (ENSSMRG00000023614)	NIFK (ENSSMRG00000023616) #22	ENSSMRG00000023617	ENSSMRG00000023618	MFN1 (ENSSMRG00000023619)	ZNF639 (ENSSMRG00000023620)	ENSSMRG00000023621	PIK3CA (ENSSMRG00000023622)	ZMAT3 (ENSSMRG00000023623)	KCNMB2 (ENSSMRG00000023624)	TBL1XR1 (ENSSMRG00000023626)	NAALADL2 (ENSSMRG00000023630)	NLGN1 (ENSSMRG00000023635)	SPATA16 (ENSSMRG00000023636)	ECT2 (ENSSMRG00000023637)	NCEH1 (ENSSMRG00000023639)	TNFSF10 (ENSSMRG00000023640)
tuatara	MODERN SPECIES	633	ENSSPUG00000016660	ENSSPUG00000016691	CCDC14 (ENSSPUG00000016713)	MYLK (ENSSPUG00000016724)	HACD2 (ENSSPUG00000016748)	ADCY5 (ENSSPUG00000016833)	SEC22A (ENSSPUG00000017100)	PDIA5 (ENSSPUG00000017114)	SEMA5B (ENSSPUG00000017140)	SLC49A4 (ENSSPUG00000017168)	HSPBAP1 (ENSSPUG00000017240)	SLC15A2 (ENSSPUG00000017362)	EAF2 (ENSSPUG00000017376)	IQCB1 (ENSSPUG00000017410)	TSN (ENSSPUG00000017518) #21	NIFK (ENSSPUG00000017537) #22	CLASP1 (ENSSPUG00000017573) #23	TFCP2L1 (ENSSPUG00000017607) #24	GLI2 (ENSSPUG00000017627) #25	ENSSPUG00000017634	INHBB (ENSSPUG00000017644) #26	RALB (ENSSPUG00000017649) #27	ENSSPUG00000017656	ENSSPUG00000017665	EPB41L5 (ENSSPUG00000017674) #29	PTPN4 (ENSSPUG00000017711) #30	TMEM177 (ENSSPUG00000017747) #32	MRAS (ENSSPUG00000017750)
Archelosauria	ANCESTRAL SPECIES	8	ENSGT00390000017916	ENSGT00950000183570	ENSGT00940000157879	ENSGT00530000062962.a.a	ENSGT00940000158054	ENSGT00940000158470	ENSGT00940000156797	ENSGT00940000156712	ENSGT01030000234625.D	ENSGT00940000159893	ENSGT00940000156507	ENSGT00390000017724.a.b	ENSGT00390000002188	ENSGT00940000164632.a	ENSGT00940000153568.B #21	ENSGT00390000011515 #22	ENSGT00940000154817.b.b.b #23	ENSGT00940000159158 #24	ENSGT00940000159213 #25	ENSGT00940000159862 #26	ENSGT00940000155984 #27	ENSGT00940000165735	ENSGT00960000190080	ENSGT00940000156332 #29	ENSGT00940000157211 #30	ENSGT00940000164607	ENSGT00940000163551.c.a	ENSGT00390000010354 #32	ENSGT00940000156353	ENSGT00940000160228	ENSGT00940000160532 #20
Cryptodira	ANCESTRAL SPECIES	5	ENSGT00390000012731.a.b	ENSGT00390000017916	ENSGT00940000157879	ENSGT00530000062962.a.a	ENSGT00940000158054	ENSGT00940000158470	ENSGT00940000156797	ENSGT00940000156712	ENSGT01030000234625.D	ENSGT00940000159893	ENSGT00940000156507	ENSGT00390000017724.a.b	ENSGT00390000002188	ENSGT00940000164632.a	ENSGT00940000153568.B #21	ENSGT00390000011515 #22	ENSGT00940000154817.b.b.b #23	ENSGT00940000159158 #24	ENSGT00940000159213 #25	ENSGT00940000159862 #26	ENSGT00940000155984 #27	ENSGT00940000156332 #29	ENSGT00940000157211 #30	ENSGT00940000164607	ENSGT00940000163551.c.a	ENSGT00390000010354 #32	ENSGT00940000156353	ENSGT00940000160532 #20	ENSGT00510000049102 #19	ENSGT00950000182882.A.b.b #17	ENSGT00950000182905.a.b #16
Testudinoidea	ANCESTRAL SPECIES	11	ENSGT00940000155248	ENSGT00390000012731.a.b	ENSGT00390000017916	ENSGT00940000157879	ENSGT00530000062962.a.a	ENSGT00940000158054	ENSGT00940000158470	ENSGT00940000156797	ENSGT00940000156712.c	ENSGT01030000234625.D	ENSGT00940000159893	ENSGT00940000156507	ENSGT00390000017724.a.b	ENSGT00390000002188	ENSGT00940000153568.B.b #21	ENSGT00390000011515 #22	ENSGT00940000154817.b.b.b #23	ENSGT00940000159158 #24	ENSGT00940000159213 #25	ENSGT00940000159862 #26	ENSGT00940000155984 #27	ENSGT00940000156332 #29	ENSGT00940000157211 #30	ENSGT00940000164607	ENSGT00940000163551.c.a	ENSGT00390000010354 #32	ENSGT00940000156353	ENSGT00940000160532 #20	ENSGT00510000049102 #19	ENSGT00950000182882.A.b.b #17	ENSGT00950000182905.a.b #16
Emydidae	ANCESTRAL SPECIES	4	ENSGT00390000017916	ENSGT00940000157879	ENSGT00530000062962.a.a	ENSGT00940000158054	ENSGT00940000158470	ENSGT00940000156797	ENSGT00940000156712.c	ENSGT01030000234625.D	ENSGT00940000159893	ENSGT00940000156507	ENSGT00390000017724.a.b	ENSGT00390000002188	ENSGT00940000164632.a	ENSGT00940000153568.B.a #21	ENSGT00940000153568.B.b.b #21	ENSGT00390000011515 #22	ENSGT00940000154817.b.b.b #23	ENSGT00940000159158 #24	ENSGT00940000159213 #25	ENSGT00940000159862 #26	ENSGT00940000155984 #27	ENSGT00940000156332 #29	ENSGT00940000157211 #30	ENSGT00390000010354 #32	ENSGT00940000156353	ENSGT00940000160532 #20	ENSGT00510000049102 #19	ENSGT00950000182882.A.b.b #17	ENSGT00950000182905.a.b #16	ENSGT00390000002204 #15	ENSGT00940000156884 #14
painted turtle	MODERN SPECIES	697	ENSCPBG00000013803	CCDC14 (ENSCPBG00000013800)	MYLK (ENSCPBG00000013789)	HACD2 (ENSCPBG00000013787)	ADCY5 (ENSCPBG00000013781)	SEC22A (ENSCPBG00000013778)	PDIA5 (ENSCPBG00000013776)	SEMA5B (ENSCPBG00000013766)	SLC49A4 (ENSCPBG00000013757)	HSPBAP1 (ENSCPBG00000013754)	SLC15A2 (ENSCPBG00000013753)	EAF2 (ENSCPBG00000013751)	IQCB1 (ENSCPBG00000013750)	ENSCPBG00000013745	ENSCPBG00000013741 #21	NIFK (ENSCPBG00000013739) #22	CLASP1 (ENSCPBG00000013734) #23	TFCP2L1 (ENSCPBG00000013730) #24	GLI2 (ENSCPBG00000013726) #25	RALB (ENSCPBG00000013718) #27	EPB41L5 (ENSCPBG00000013701) #29	PTPN4 (ENSCPBG00000013687) #30	TMEM177 (ENSCPBG00000013684) #32	MRAS (ENSCPBG00000013681)	CNTNAP5 (ENSCPBG00000013674) #20	GYPC (ENSCPBG00000013670) #19	BIN1 (ENSCPBG00000013655) #17	CYP27C1 (ENSCPBG00000013644) #16	ERCC3 (ENSCPBG00000013638) #15	MAP3K2 (ENSCPBG00000013632) #14	PECR (ENSCPBG00000013628)
Three-toed box turtle	MODERN SPECIES	25	KALRN (ENSTMTG00000012301)	ENSTMTG00000012262	CCDC14 (ENSTMTG00000012230)	MYLK (ENSTMTG00000012095)	HACD2 (ENSTMTG00000012055)	ADCY5 (ENSTMTG00000010332)	SEC22A (ENSTMTG00000010200)	PDIA5 (ENSTMTG00000010164)	SEMA5B (ENSTMTG00000009643)	SLC49A4 (ENSTMTG00000009574)	HSPBAP1 (ENSTMTG00000009551)	SLC15A2 (ENSTMTG00000009528)	EAF2 (ENSTMTG00000009515)	IQCB1 (ENSTMTG00000009487)	ENSTMTG00000009461 #21	NIFK (ENSTMTG00000009447) #22	CLASP1 (ENSTMTG00000001769) #23	TFCP2L1 (ENSTMTG00000000868) #24	GLI2 (ENSTMTG00000000839) #25	INHBB (ENSTMTG00000000820) #26	RALB (ENSTMTG00000000810) #27	EPB41L5 (ENSTMTG00000000784) #29	PTPN4 (ENSTMTG00000000757) #30	ENSTMTG00000000747 #30	TMEM177 (ENSTMTG00000000740) #32	MRAS (ENSTMTG00000000734)	CNTNAP5 (ENSTMTG00000000702) #20	GYPC (ENSTMTG00000000690) #19	BIN1 (ENSTMTG00000000628) #17	CYP27C1 (ENSTMTG00000000553) #16	ERCC3 (ENSTMTG00000000506) #15
Testudinidae	ANCESTRAL SPECIES	8	ENSGT00940000155248	ENSGT00390000012731.a.b	ENSGT00390000017916	ENSGT00940000157879	ENSGT00530000062962.a.a	ENSGT00940000158054	ENSGT00940000158470	ENSGT00940000156797	ENSGT00940000156712.c	ENSGT01030000234625.D	ENSGT00940000159893	ENSGT00940000156507	ENSGT00390000017724.a.b	ENSGT00390000002188	ENSGT00940000153568.B.b #21	ENSGT00390000011515 #22	ENSGT00940000154817.b.b.b #23	ENSGT00940000159158 #24	ENSGT00940000159213 #25	ENSGT00960000189138	ENSGT00940000159862 #26	ENSGT00940000155984 #27	ENSGT00940000156332 #29	ENSGT00940000157211 #30	ENSGT00940000164607	ENSGT00940000163551.c.a	ENSGT00390000010354 #32	ENSGT00940000156353	ENSGT00940000160532 #20	ENSGT00510000049102 #19	ENSGT00950000182882.A.b.b #17
Abingdon island giant tortoise	MODERN SPECIES	2439									ENSCABG00000017526	ENSCABG00000017531	HSPBAP1 (ENSCABG00000017538)	SLC15A2 (ENSCABG00000017576)	EAF2 (ENSCABG00000017583)	IQCB1 (ENSCABG00000017588)	TSN (ENSCABG00000017597) #21	NIFK (ENSCABG00000017598) #22	ENSCABG00000017601 #23	CLASP1 (ENSCABG00000017608) #23	TFCP2L1 (ENSCABG00000017619) #24
Goode s thornscrub tortoise	MODERN SPECIES	2	ENSGEVG00005005531	ENSGEVG00005005629	CCDC14 (ENSGEVG00005005677)	MYLK (ENSGEVG00005005836)	HACD2 (ENSGEVG00005005945)	ADCY5 (ENSGEVG00005005999)	SEC22A (ENSGEVG00005006147)	PDIA5 (ENSGEVG00005006166)	SEMA5B (ENSGEVG00005006230)	SLC49A4 (ENSGEVG00005006517)	HSPBAP1 (ENSGEVG00005006542)	SLC15A2 (ENSGEVG00005006586)	EAF2 (ENSGEVG00005006655)	IQCB1 (ENSGEVG00005006675)	ENSGEVG00005006699 #21	NIFK (ENSGEVG00005006707) #22	CLASP1 (ENSGEVG00005007832) #23	TFCP2L1 (ENSGEVG00005014777) #24	GLI2 (ENSGEVG00005014900) #25	ENSGEVG00005015153	ENSGEVG00005015168	INHBB (ENSGEVG00005015187) #26	RALB (ENSGEVG00005015239) #27	EPB41L5 (ENSGEVG00005015314) #29	PTPN4 (ENSGEVG00005015469) #30	TMEM177 (ENSGEVG00005015541) #32	MRAS (ENSGEVG00005015556)	CNTNAP5 (ENSGEVG00005015580) #20	GYPC (ENSGEVG00005015675) #19	BIN1 (ENSGEVG00005015838) #17	CYP27C1 (ENSGEVG00005016909) #16
Chinese turtle	MODERN SPECIES	2215	CCDC14 (ENSPSIG00000004045)	MYLK (ENSPSIG00000004151)	HACD2 (ENSPSIG00000005158)	ADCY5 (ENSPSIG00000005196)	SEC22A (ENSPSIG00000006939)	PDIA5 (ENSPSIG00000004534)	SEMA5B (ENSPSIG00000004576)	SLC49A4 (ENSPSIG00000004846)	HSPBAP1 (ENSPSIG00000004951)	ENSPSIG00000005161	SLC15A2 (ENSPSIG00000005215)	ENSPSIG00000005512	IQCB1 (ENSPSIG00000005680)	ENSPSIG00000005987	TSN (ENSPSIG00000006064) #21	NIFK (ENSPSIG00000006103) #22	CLASP1 (ENSPSIG00000006115) #23	TFCP2L1 (ENSPSIG00000008408) #24	GLI2 (ENSPSIG00000008752) #25	RALB (ENSPSIG00000008826) #27	EPB41L5 (ENSPSIG00000008929) #29	PTPN4 (ENSPSIG00000009317) #30	TMEM177 (ENSPSIG00000009364) #32	MRAS (ENSPSIG00000009592)
Archosauria	ANCESTRAL SPECIES	6	ENSGT00390000017916	ENSGT00950000183570	ENSGT00940000157879	ENSGT00530000062962.a.a	ENSGT00940000158054	ENSGT00940000158470	ENSGT00940000156797	ENSGT00940000156712	ENSGT01030000234625.D	ENSGT00940000159893	ENSGT00940000156507	ENSGT00390000017724.a.b	ENSGT00390000002188	ENSGT00940000164632.a	ENSGT00940000153568.B #21	ENSGT00390000011515 #22	ENSGT00940000154817.b.b.b #23	ENSGT00940000159158 #24	ENSGT00940000159213 #25	ENSGT00940000159862 #26	ENSGT00940000155984 #27	ENSGT00940000165735	ENSGT00960000190080	ENSGT00940000156332 #29	ENSGT00940000157211 #30	ENSGT00390000010354 #32	ENSGT00940000156353	ENSGT00940000160228	ENSGT00940000160532 #20	ENSGT00510000049102 #19	ENSGT00950000182882.A.b.b #17
Aves	ANCESTRAL SPECIES	8	ENSGT00390000017916	ENSGT00950000183570	ENSGT00940000157879	ENSGT00530000062962.a.a	ENSGT00940000158054	ENSGT00940000158470	ENSGT00940000156797	ENSGT00940000156712	ENSGT01030000234625.D	ENSGT00940000159893	ENSGT00940000156507	ENSGT00390000017724.a.b	ENSGT00390000002188	ENSGT00940000164632.a	ENSGT00940000153568.B #21	ENSGT00390000011515 #22	ENSGT00940000154817.b.b.b #23	ENSGT00940000159158 #24	ENSGT00940000159213.c #25	ENSGT00940000159862 #26	ENSGT00940000155984 #27	ENSGT00940000165735	ENSGT00960000190080	ENSGT00940000156332 #29	ENSGT00940000157211 #30	ENSGT00390000010354 #32	ENSGT00940000156353	ENSGT00940000160228	ENSGT00940000160532 #20	ENSGT00510000049102 #19	ENSGT00950000182882.A.b.b #17
Neognathae	ANCESTRAL SPECIES	6	ENSGT00390000017916	ENSGT00950000183570	ENSGT00940000157879	ENSGT00530000062962.a.a	ENSGT00940000158054	ENSGT00940000158470	ENSGT00940000156797	ENSGT00940000156712	ENSGT01030000234625.D	ENSGT00940000159893	ENSGT00940000156507	ENSGT00390000017724.a.b	ENSGT00390000002188	ENSGT00940000164632.a	ENSGT00940000153568.B #21	ENSGT00390000011515 #22	ENSGT00940000154817.b.b.b #23	ENSGT00940000159158 #24	ENSGT00940000159213.c #25	ENSGT00940000159862 #26	ENSGT00940000155984 #27	ENSGT00940000165735	ENSGT00960000190080	ENSGT00940000156332 #29	ENSGT00940000157211 #30	ENSGT00390000010354 #32	ENSGT00940000156353	ENSGT00940000160228	ENSGT00940000160532 #20	ENSGT00510000049102 #19	ENSGT00950000182882.A.b.b #17
Galloanserae	ANCESTRAL SPECIES	7	ENSGT00940000155248	ENSGT00390000017916	ENSGT00940000157879	ENSGT00530000062962.a.a	ENSGT00940000158054	ENSGT00940000158470	ENSGT00940000156797	ENSGT00940000156712	ENSGT01030000234625.D	ENSGT00940000159893	ENSGT00940000156507	ENSGT00390000017724.a.b	ENSGT00390000002188	ENSGT00940000164632.a	ENSGT00940000153568.B #21	ENSGT00390000011515 #22	ENSGT00940000154817.b.b.b #23	ENSGT00940000159158 #24	ENSGT00940000159862 #26	ENSGT00940000155984 #27	ENSGT00940000165735	ENSGT00940000156332 #29	ENSGT00940000157211 #30	ENSGT00390000010354 #32	ENSGT00940000156353	ENSGT00940000160532 #20	ENSGT00510000049102 #19	ENSGT00950000182882.A.b.b #17	ENSGT00950000182905.a.b #16	ENSGT00390000002204 #15	ENSGT00940000156884 #14
Phasianidae	ANCESTRAL SPECIES	8	ENSGT00940000155248	ENSGT00390000017916	ENSGT00940000157879	ENSGT00530000062962.a.a	ENSGT00940000158054	ENSGT00940000158470	ENSGT00940000156797	ENSGT00940000156712	ENSGT01030000234625.D	ENSGT00940000159893	ENSGT00940000156507	ENSGT00390000017724.a.b	ENSGT00390000002188	ENSGT00940000164632.a	ENSGT00940000153568.B #21	ENSGT00390000011515 #22	ENSGT00940000154817.b.b.b #23	ENSGT00940000159158 #24	ENSGT00940000159862 #26	ENSGT00940000155984 #27	ENSGT00940000165735	ENSGT00940000156332 #29	ENSGT00940000157211 #30	ENSGT00390000010354 #32	ENSGT00940000156353	ENSGT00940000160532 #20	ENSGT00510000049102 #19	ENSGT00950000182882.A.b.b #17	ENSGT00950000182905.a.b #16	ENSGT00390000002204 #15	ENSGT00940000156884 #14
Phasianidae_b	ANCESTRAL SPECIES	8	ENSGT00390000001856	ENSGT00940000155248	ENSGT00390000017916	ENSGT00940000157879	ENSGT00530000062962.a.a	ENSGT00940000158054	ENSGT00940000158470	ENSGT00940000156797	ENSGT00940000156712	ENSGT00940000159893	ENSGT00940000156507	ENSGT00390000017724.a.b	ENSGT00390000002188	ENSGT00940000164632.a	ENSGT00940000153568.B #21	ENSGT00390000011515 #22	ENSGT00940000154817.b.b.b #23	ENSGT00940000159158 #24	ENSGT00940000159862 #26	ENSGT00940000155984 #27	ENSGT00940000165735	ENSGT00940000156332 #29	ENSGT00940000157211 #30	ENSGT00390000010354 #32	ENSGT00940000156353	ENSGT00940000160532 #20	ENSGT00510000049102 #19	ENSGT00950000182882.A.b.b #17	ENSGT00950000182905.a.b #16	ENSGT00390000002204 #15	ENSGT00940000156884 #14
Turkey	MODERN SPECIES	27	ENSMGAG00000018309	ENSMGAG00000011749 #20	ENSMGAG00000011812	ENSMGAG00000015934 #32	ENSMGAG00000022281	ENSMGAG00000018020 #30	ENSMGAG00000011825 #30	ENSMGAG00000011848 #29	ENSMGAG00000011863	ENSMGAG00000011867 #27	ENSMGAG00000003717 #26	ENSMGAG00000011872 #25	ENSMGAG00000011889 #24	ENSMGAG00000011917 #23	ENSMGAG00000022243 #23	ENSMGAG00000011953 #22	ENSMGAG00000017830	ENSMGAG00000011956 #21	ENSMGAG00000011968	ENSMGAG00000011973	ENSMGAG00000012011	ENSMGAG00000011982	ENSMGAG00000012014	ENSMGAG00000012023	ENSMGAG00000012032	ENSMGAG00000020362	ENSMGAG00000012056	ENSMGAG00000012075	ENSMGAG00000012084	ENSMGAG00000012109	ENSMGAG00000012096
Chicken	MODERN SPECIES	36	UMPS (ENSGALG00010019985)	KALRN (ENSGALG00010019932)	CCDC14 (ENSGALG00010019854)	MYLK (ENSGALG00010018627)	HACD2 (ENSGALG00010018544)	ADCY6 (ENSGALG00010018531)	SEC22A (ENSGALG00010018524)	PDIA5 (ENSGALG00010021338)	SEMA5B (ENSGALG00010018458)	HSPBAP1 (ENSGALG00010018434)	SLC15A2 (ENSGALG00010018413)	EAF2 (ENSGALG00010018514)	IQCB1 (ENSGALG00010018470)	ARHGEF1 (ENSGALG00010021793)	TSN (ENSGALG00010021772) #21	NIFK (ENSGALG00010021759) #22	CLASP1 (ENSGALG00010021749) #23	TFCP2L1 (ENSGALG00010021716) #24	GLI2 (ENSGALG00010018968)	INHBB (ENSGALG00010018937) #26	RALB (ENSGALG00010018919) #27	ENSGALG00010018874	EPB41L5 (ENSGALG00010018858) #29	PTPN4 (ENSGALG00010018829) #30	TMEM177 (ENSGALG00010018764) #32	MRAS (ENSGALG00010018670)	CNTNAP5 (ENSGALG00010021708) #20	GYPC (ENSGALG00010021698) #19	BIN1 (ENSGALG00010021684) #17	CYP27C1 (ENSGALG00010021299) #16	ERCC3 (ENSGALG00010021290) #15
Japanese quail	MODERN SPECIES	25	ENSCJPG00005021051	CCDC14 (ENSCJPG00005021062)	MYLK (ENSCJPG00005021064)	HACD2 (ENSCJPG00005021067)	ADCY5 (ENSCJPG00005021068)	SEC22A (ENSCJPG00005021071)	PDIA5 (ENSCJPG00005021072)	SEMA5B (ENSCJPG00005021075)	SLC49A4 (ENSCJPG00005021076)	HSPBAP1 (ENSCJPG00005021077)	SLC15A2 (ENSCJPG00005021078)	EAF2 (ENSCJPG00005021149)	IQCB1 (ENSCJPG00005021151)	ENSCJPG00005000921	TSN (ENSCJPG00005000928) #21	NIFK (ENSCJPG00005000944) #22	CLASP1 (ENSCJPG00005002113) #23	TFCP2L1 (ENSCJPG00005012935) #24	ENSCJPG00005012936	INHBB (ENSCJPG00005012938) #26	RALB (ENSCJPG00005012939) #27	EPB41L5 (ENSCJPG00005012940) #29	PTPN4 (ENSCJPG00005012941) #30	TMEM177 (ENSCJPG00005013042) #32	MRAS (ENSCJPG00005013043)	CNTNAP5 (ENSCJPG00005013048) #20	GYPC (ENSCJPG00005013052) #19	BIN1 (ENSCJPG00005013056) #17	CYP27C1 (ENSCJPG00005013059) #16	ERCC3 (ENSCJPG00005013060) #15	MAP3K2 (ENSCJPG00005013061) #14
Anatidae	ANCESTRAL SPECIES	10	ENSGT00390000001856	ENSGT00940000155248	ENSGT00390000017916	ENSGT00940000157879	ENSGT00530000062962.a.a	ENSGT00940000158054	ENSGT00940000158470	ENSGT00940000156797	ENSGT00940000156712	ENSGT01030000234625.D	ENSGT00940000159893	ENSGT00940000156507	ENSGT00390000017724.a.b	ENSGT00390000002188	ENSGT00940000153568.B #21	ENSGT00390000011515 #22	ENSGT00940000154817.b.b.b #23	ENSGT00940000159158 #24	ENSGT00940000159862 #26	ENSGT00940000155984 #27	ENSGT00940000165735	ENSGT00940000156332 #29	ENSGT00940000157211 #30	ENSGT00390000010354 #32	ENSGT00940000156353	ENSGT00940000160532 #20	ENSGT00510000049102 #19	ENSGT00950000182882.A.b.b #17	ENSGT00950000182905.a.b #16	ENSGT00390000002204 #15	ENSGT00940000156884 #14
Duck	MODERN SPECIES	25	UMPS (ENSAPLG00000007365)	KALRN (ENSAPLG00000006373)	CCDC14 (ENSAPLG00000006264)	MYLK (ENSAPLG00000005685)	HACD2 (ENSAPLG00000016518)	ADCY5 (ENSAPLG00000005419)	SEC22A (ENSAPLG00000005344)	PDIA5 (ENSAPLG00000005015)	SEMA5B (ENSAPLG00000004815)	SLC49A4 (ENSAPLG00000004155)	HSPBAP1 (ENSAPLG00000003995)	SLC15A2 (ENSAPLG00000003151)	EAF2 (ENSAPLG00000003048)	IQCB1 (ENSAPLG00000002873)	TSN (ENSAPLG00000030910) #21	NIFK (ENSAPLG00000024403) #22	CLASP1 (ENSAPLG00000002082) #23	TFCP2L1 (ENSAPLG00000015648) #24	ENSAPLG00000015141	INHBB (ENSAPLG00000016916) #26	RALB (ENSAPLG00000017843) #27	ENSAPLG00000017402	EPB41L5 (ENSAPLG00000014391) #29	PTPN4 (ENSAPLG00000013704) #30	TMEM177 (ENSAPLG00000001672) #32	MRAS (ENSAPLG00000013435)	CNTNAP5 (ENSAPLG00000013229) #20	GYPC (ENSAPLG00000013213) #19	BIN1 (ENSAPLG00000012452) #17	CYP27C1 (ENSAPLG00000012186) #16	ERCC3 (ENSAPLG00000012068) #15
Pink-footed goose	MODERN SPECIES	147			CCDC14 (ENSABRG00000018060)	MYLK (ENSABRG00000018031)	HACD2 (ENSABRG00000018022)	ADCY5 (ENSABRG00000018007)	SEC22A (ENSABRG00000017995)	PDIA5 (ENSABRG00000017921)	SEMA5B (ENSABRG00000017885)	SLC49A4 (ENSABRG00000017883)	HSPBAP1 (ENSABRG00000017882)	SLC15A2 (ENSABRG00000017871)	EAF2 (ENSABRG00000017869)	IQCB1 (ENSABRG00000017862)	TSN (ENSABRG00000017857) #21	NIFK (ENSABRG00000017848) #22	CLASP1 (ENSABRG00000001120) #23	TFCP2L1 (ENSABRG00000000521) #24	ENSABRG00000000504	INHBB (ENSABRG00000000445) #26	RALB (ENSABRG00000000402) #27	ENSABRG00000000361
Neognathae_b	ANCESTRAL SPECIES	7	ENSGT00390000017916	ENSGT00950000183570	ENSGT00940000157879	ENSGT00530000062962.a.a	ENSGT00940000158054	ENSGT00940000158470	ENSGT00940000156797	ENSGT00940000156712	ENSGT01030000234625.D	ENSGT00940000159893	ENSGT00940000156507	ENSGT00390000017724.a.b	ENSGT00390000002188	ENSGT00940000164632.a	ENSGT00940000153568.B #21	ENSGT00390000011515 #22	ENSGT00940000154817.b.b.b #23	ENSGT00940000159158 #24	ENSGT00940000159213.c #25	ENSGT00940000159862 #26	ENSGT00940000155984 #27	ENSGT00940000165735	ENSGT00960000190080	ENSGT00940000156332 #29	ENSGT00940000157211 #30	ENSGT00390000010354 #32	ENSGT00940000156353	ENSGT00940000160228	ENSGT00940000160532 #20	ENSGT00510000049102 #19	ENSGT00950000182882.A.b.b #17
Neognathae_c	ANCESTRAL SPECIES	9	ENSGT00390000017916	ENSGT00950000183570	ENSGT00940000157879	ENSGT00530000062962.a.a	ENSGT00940000158054	ENSGT00940000158470	ENSGT00940000156797	ENSGT00940000156712	ENSGT01030000234625.D	ENSGT00940000159893	ENSGT00940000156507	ENSGT00390000017724.a.b	ENSGT00390000002188	ENSGT00940000164632.a	ENSGT00940000153568.B #21	ENSGT00390000011515 #22	ENSGT00940000154817.b.b.b #23	ENSGT00940000159158 #24	ENSGT00940000159213.d #25	ENSGT00940000159862 #26	ENSGT00940000155984 #27	ENSGT00940000165735	ENSGT00960000190080	ENSGT00940000156332 #29	ENSGT00940000157211 #30	ENSGT00390000010354 #32	ENSGT00940000156353	ENSGT00940000160532 #20	ENSGT00510000049102 #19	ENSGT00950000182882.A.b.b #17	ENSGT00950000182905.a.b #16
Golden eagle	MODERN SPECIES	22	KALRN (ENSACCG00020004082)	CCDC14 (ENSACCG00020004018)	MYLK (ENSACCG00020003927)	HACD2 (ENSACCG00020003773)	ADCY5 (ENSACCG00020003743)	SEC22A (ENSACCG00020003729)	PDIA5 (ENSACCG00020003711)	SEMA5B (ENSACCG00020003647)	SLC49A4 (ENSACCG00020003542)	HSPBAP1 (ENSACCG00020003529)	SLC15A2 (ENSACCG00020003490)	EAF2 (ENSACCG00020003461)	IQCB1 (ENSACCG00020003440)	ENSACCG00020003425	TSN (ENSACCG00020003407) #21	NIFK (ENSACCG00020003397) #22	CLASP1 (ENSACCG00020003255) #23	TFCP2L1 (ENSACCG00020003144) #24	GLI2 (ENSACCG00020003057) #25	ENSACCG00020003037	INHBB (ENSACCG00020003029) #26	RALB (ENSACCG00020003019) #27	ENSACCG00020003006	ENSACCG00020002992	EPB41L5 (ENSACCG00020002970) #29	PTPN4 (ENSACCG00020002938) #30	TMEM177 (ENSACCG00020002916) #32	MRAS (ENSACCG00020002908)	CNTNAP5 (ENSACCG00020002884) #20	ENSACCG00020002857	GYPC (ENSACCG00020002841) #19
Kakapo	MODERN SPECIES	22	ENSSHBG00005013474	ENSSHBG00005013507	ENSSHBG00005013525	HACD2 (ENSSHBG00005013550)	ADCY5 (ENSSHBG00005013573)	SEC22A (ENSSHBG00005013591)	PDIA5 (ENSSHBG00005013628)	SEMA5B (ENSSHBG00005013784)	SLC49A4 (ENSSHBG00005014404)	HSPBAP1 (ENSSHBG00005014410)	SLC15A2 (ENSSHBG00005014420)	EAF2 (ENSSHBG00005014431)	IQCB1 (ENSSHBG00005014437)	ENSSHBG00005014452	TSN (ENSSHBG00005014465) #21	NIFK (ENSSHBG00005014475) #22	CLASP1 (ENSSHBG00005014747) #23	TFCP2L1 (ENSSHBG00005016752) #24	ENSSHBG00005016760	INHBB (ENSSHBG00005016773) #26	RALB (ENSSHBG00005016778) #27	ENSSHBG00005016797	EPB41L5 (ENSSHBG00005016820) #29	PTPN4 (ENSSHBG00005016891) #30	TMEM177 (ENSSHBG00005016906) #32	MRAS (ENSSHBG00005016912)	CNTNAP5 (ENSSHBG00005017253) #20	GYPC (ENSSHBG00005019857) #19	BIN1 (ENSSHBG00005019859) #17	CYP27C1 (ENSSHBG00005019864) #16	ERCC3 (ENSSHBG00005019867) #15
Passeriformes	ANCESTRAL SPECIES	6	ENSGT00940000155248	ENSGT00390000017916	ENSGT00940000157879	ENSGT00530000062962.a.a	ENSGT00940000158054	ENSGT00940000158470	ENSGT00940000156797	ENSGT00940000156712	ENSGT01030000234625.D	ENSGT00940000159893	ENSGT00940000156507	ENSGT00390000017724.a.b	ENSGT00390000002188	ENSGT00940000164632.a	ENSGT00940000153568.B #21	ENSGT00390000011515 #22	ENSGT00940000154817.b.b.b #23	ENSGT00940000159158 #24	ENSGT00940000159213.c #25	ENSGT00940000159862 #26	ENSGT00940000155984 #27	ENSGT00940000165735	ENSGT00940000156332 #29	ENSGT00940000157211 #30	ENSGT00390000010354 #32	ENSGT00940000156353	ENSGT00940000160228	ENSGT00940000160532 #20	ENSGT00510000049102 #19	ENSGT00950000182882.A.b.b #17	ENSGT00950000182905.a.b #16
Passeriformes_d	ANCESTRAL SPECIES	8	ENSGT00940000155248	ENSGT00390000017916	ENSGT00940000157879	ENSGT00530000062962.a.a	ENSGT00940000158054	ENSGT00940000158470	ENSGT00940000156797	ENSGT00940000156712	ENSGT01030000234625.D	ENSGT00940000159893	ENSGT00940000156507	ENSGT00390000017724.a.b	ENSGT00390000002188	ENSGT00940000164632.a	ENSGT00940000153568.B #21	ENSGT00390000011515 #22	ENSGT00940000154817.b.b.b #23	ENSGT00940000159158 #24	ENSGT00940000159213.c #25	ENSGT00940000159862 #26	ENSGT00940000155984 #27	ENSGT00940000165735	ENSGT00940000156332 #29	ENSGT00940000157211 #30	ENSGT00390000010354 #32	ENSGT00940000156353	ENSGT00940000160228	ENSGT00940000160532 #20	ENSGT00510000049102 #19	ENSGT00950000182882.A.b.b #17	ENSGT00950000182905.a.b #16
Passeriformes_g	ANCESTRAL SPECIES	9	ENSGT00940000155248	ENSGT00390000017916	ENSGT00940000157879	ENSGT00530000062962.a.a	ENSGT00940000158054	ENSGT00940000158470	ENSGT00940000156797	ENSGT00940000156712	ENSGT01030000234625.D	ENSGT00940000159893	ENSGT00940000156507	ENSGT00390000017724.a.b	ENSGT00390000002188	ENSGT00940000164632.a	ENSGT00940000153568.B #21	ENSGT00390000011515 #22	ENSGT00940000154817.b.b.b #23	ENSGT00940000159158 #24	ENSGT00940000159213.c #25	ENSGT00940000159862 #26	ENSGT00940000155984 #27	ENSGT00940000165735	ENSGT00940000156332 #29	ENSGT00940000157211 #30	ENSGT00390000010354 #32	ENSGT00940000156353	ENSGT00940000160228	ENSGT00940000160532 #20	ENSGT00510000049102 #19	ENSGT00950000182882.A.b.b #17	ENSGT00950000182905.a.b #16
Medium ground finch	MODERN SPECIES	1	KALRN (ENSGFOG00000006979)	CCDC14 (ENSGFOG00000011103)	MYLK (ENSGFOG00000011113)	HACD2 (ENSGFOG00000011128)	ADCY5 (ENSGFOG00000011162)	SEC22A (ENSGFOG00000011779)	PDIA5 (ENSGFOG00000011791)	SEMA5B (ENSGFOG00000011815)	SLC49A4 (ENSGFOG00000011879)	HSPBAP1 (ENSGFOG00000011906)	SLC15A2 (ENSGFOG00000011909)	EAF2 (ENSGFOG00000011921)	IQCB1 (ENSGFOG00000011930)	ENSGFOG00000011935	TSN (ENSGFOG00000011938) #21	NIFK (ENSGFOG00000011941) #22	CLASP1 (ENSGFOG00000011986) #23	TFCP2L1 (ENSGFOG00000012568) #24	GLI2 (ENSGFOG00000012599) #25	INHBB (ENSGFOG00000012624) #26	RALB (ENSGFOG00000012626) #27	EPB41L5 (ENSGFOG00000012629) #29	ENSGFOG00000012632 #30	ENSGFOG00000012637 #30	TMEM177 (ENSGFOG00000012639) #32	MRAS (ENSGFOG00000012641)	ENSGFOG00000012643	CNTNAP5 (ENSGFOG00000012647) #20	GYPC (ENSGFOG00000000199) #19	BIN1 (ENSGFOG00000000224) #17	CYP27C1 (ENSGFOG00000000263) #16
Passeroidea	ANCESTRAL SPECIES	8	ENSGT00940000155248	ENSGT00390000017916	ENSGT00940000157879	ENSGT00530000062962.a.a	ENSGT00940000158054	ENSGT00940000158470	ENSGT00940000156797	ENSGT00940000156712	ENSGT01030000234625.D	ENSGT00940000159893	ENSGT00940000156507	ENSGT00390000017724.a.b	ENSGT00390000002188	ENSGT00940000164632.a	ENSGT00940000153568.B #21	ENSGT00390000011515 #22	ENSGT00940000154817.b.b.b #23	ENSGT00940000159158 #24	ENSGT00940000159862 #26	ENSGT00940000155984 #27	ENSGT00940000165735	ENSGT00940000156332 #29	ENSGT00940000157211 #30	ENSGT00390000010354 #32	ENSGT00940000156353	ENSGT00940000160532 #20	ENSGT00510000049102 #19	ENSGT00950000182882.A.b.b #17	ENSGT00950000182905.a.b #16	ENSGT00390000002204 #15	ENSGT00940000156884 #14
Zebra finch	MODERN SPECIES	29	KALRN (ENSTGUG00000004175)	CCDC14 (ENSTGUG00000004227)	MYLK (ENSTGUG00000004238)	HACD2 (ENSTGUG00000025666)	ADCY5 (ENSTGUG00000004293)	SEC22A (ENSTGUG00000004336)	PDIA5 (ENSTGUG00000004344)	SEMA5B (ENSTGUG00000004366)	SLC49A4 (ENSTGUG00000004391)	HSPBAP1 (ENSTGUG00000004406)	SLC15A2 (ENSTGUG00000026244)	EAF2 (ENSTGUG00000020224)	IQCB1 (ENSTGUG00000004420)	ENSTGUG00000004441	TSN (ENSTGUG00000020974) #21	NIFK (ENSTGUG00000004461) #22	CLASP1 (ENSTGUG00000004469) #23	TFCP2L1 (ENSTGUG00000004573) #24	ENSTGUG00000004599	INHBB (ENSTGUG00000018814) #26	RALB (ENSTGUG00000029222) #27	EPB41L5 (ENSTGUG00000004633) #29	PTPN4 (ENSTGUG00000004689) #30	TMEM177 (ENSTGUG00000004726) #32	MRAS (ENSTGUG00000004727)	CNTNAP5 (ENSTGUG00000004748) #20	GYPC (ENSTGUG00000019495) #19	BIN1 (ENSTGUG00000004882) #17	CYP27C1 (ENSTGUG00000004904) #16	ERCC3 (ENSTGUG00000004920) #15	MAP3K2 (ENSTGUG00000004975) #14
Common canary	MODERN SPECIES	8	CCDC14 (ENSSCAG00000011680)	MYLK (ENSSCAG00000011699)	HACD2 (ENSSCAG00000011720)	ADCY5 (ENSSCAG00000011730)	SEC22A (ENSSCAG00000011735)	PDIA5 (ENSSCAG00000011764)	SEMA5B (ENSSCAG00000011850)	SLC49A4 (ENSSCAG00000011876)	ENSSCAG00000011921	HSPBAP1 (ENSSCAG00000011928)	SLC15A2 (ENSSCAG00000011937)	EAF2 (ENSSCAG00000011950)	IQCB1 (ENSSCAG00000011957)	ENSSCAG00000011967	TSN (ENSSCAG00000011970) #21	NIFK (ENSSCAG00000011973) #22	CLASP1 (ENSSCAG00000011981) #23	TFCP2L1 (ENSSCAG00000012018) #24	ENSSCAG00000012138	INHBB (ENSSCAG00000012147) #26	RALB (ENSSCAG00000012158) #27	ENSSCAG00000012164	EPB41L5 (ENSSCAG00000012183) #29	PTPN4 (ENSSCAG00000012204) #30	TMEM177 (ENSSCAG00000012229) #32	MRAS (ENSSCAG00000012240)	CNTNAP5 (ENSSCAG00000012280) #20	GYPC (ENSSCAG00000012425) #19	BIN1 (ENSSCAG00000012432) #17	CYP27C1 (ENSSCAG00000012448) #16	ERCC3 (ENSSCAG00000012453) #15
Flycatcher	MODERN SPECIES	26	KALRN (ENSFALG00000013409)	CCDC14 (ENSFALG00000024474)	MYLK (ENSFALG00000013373)	HACD2 (ENSFALG00000027287)	ADCY5 (ENSFALG00000013350)	SEC22A (ENSFALG00000013337)	PDIA5 (ENSFALG00000013311)	SEMA5B (ENSFALG00000013300)	SLC49A4 (ENSFALG00000013288)	HSPBAP1 (ENSFALG00000024337)	SLC15A2 (ENSFALG00000013274)	ENSFALG00000013268	IQCB1 (ENSFALG00000013262)	ENSFALG00000023350	TSN (ENSFALG00000026940) #21	NIFK (ENSFALG00000013238) #22	CLASP1 (ENSFALG00000013233) #23	TFCP2L1 (ENSFALG00000013230) #24	ENSFALG00000013217	INHBB (ENSFALG00000025610) #26	RALB (ENSFALG00000027363) #27	ENSFALG00000024980	EPB41L5 (ENSFALG00000013207) #29	PTPN4 (ENSFALG00000013202) #30	TMEM177 (ENSFALG00000014091) #32	ENSFALG00000013196	CNTNAP5 (ENSFALG00000013187) #20	GYPC (ENSFALG00000003921) #19	BIN1 (ENSFALG00000003924) #17	CYP27C1 (ENSFALG00000003928) #16	ERCC3 (ENSFALG00000003936) #15
Great tit	MODERN SPECIES	27	KALRN (ENSPMJG00000019890)	CCDC14 (ENSPMJG00000019888)	MYLK (ENSPMJG00000019887)	HACD2 (ENSPMJG00000019886)	ADCY5 (ENSPMJG00000019884)	SEC22A (ENSPMJG00000019883)	PDIA5 (ENSPMJG00000019881)	SEMA5B (ENSPMJG00000019880)	SLC49A4 (ENSPMJG00000019879)	HSPBAP1 (ENSPMJG00000019878)	SLC15A2 (ENSPMJG00000019877)	EAF2 (ENSPMJG00000019876)	IQCB1 (ENSPMJG00000019875)	ENSPMJG00000019874	TSN (ENSPMJG00000019873) #21	NIFK (ENSPMJG00000019872) #22	CLASP1 (ENSPMJG00000019788) #23	TFCP2L1 (ENSPMJG00000019785) #24	ENSPMJG00000019784	ENSPMJG00000019783	INHBB (ENSPMJG00000019782) #26	RALB (ENSPMJG00000019781) #27	EPB41L5 (ENSPMJG00000019780) #29	PTPN4 (ENSPMJG00000019779) #30	TMEM177 (ENSPMJG00000019778) #32	MRAS (ENSPMJG00000019777)	CNTNAP5 (ENSPMJG00000019774) #20	GYPC (ENSPMJG00000019773) #19	BIN1 (ENSPMJG00000019772) #17	CYP27C1 (ENSPMJG00000019771) #16	ERCC3 (ENSPMJG00000019770) #15
Australian saltwater crocodile	MODERN SPECIES	66	ENSCPRG00005001737	ENSCPRG00005001736	MYLK (ENSCPRG00005001711)	HACD2 (ENSCPRG00005001691)	ADCY5 (ENSCPRG00005001637)	SEC22A (ENSCPRG00005001595)	PDIA5 (ENSCPRG00005001581)	SEMA5B (ENSCPRG00005001540)	SLC49A4 (ENSCPRG00005001457)	HSPBAP1 (ENSCPRG00005001424)	SLC15A2 (ENSCPRG00005001404)	EAF2 (ENSCPRG00005001380)	IQCB1 (ENSCPRG00005001378)	ENSCPRG00005001375	TSN (ENSCPRG00005001374) #21	NIFK (ENSCPRG00005001371) #22	CLASP1 (ENSCPRG00005001289) #23	TFCP2L1 (ENSCPRG00005001253) #24	ENSCPRG00005001220	GLI2 (ENSCPRG00005001216) #25	INHBB (ENSCPRG00005001173) #26	RALB (ENSCPRG00005001155) #27	EPB41L5 (ENSCPRG00005001125) #29	PTPN4 (ENSCPRG00005001000) #30	ENSCPRG00005000967	ENSCPRG00005000965	TMEM177 (ENSCPRG00005000964) #32	ENSCPRG00005000960	ENSCPRG00005000934	MRAS (ENSCPRG00005000931)	CNTNAP5 (ENSCPRG00005000884) #20