Sarcopterygii	ANCESTRAL SPECIES	169														ENSGT00940000166969.b	ENSGT00940000154766.a.a #20	ENSGT00940000155533.d #22	ENSGT00390000015121	ENSGT00940000156424	ENSGT00940000157811	ENSGT00950000182886.b.b	ENSGT00940000153665.a	ENSGT00940000161612	ENSGT00390000014501	ENSGT00950000183199.b	ENSGT00940000159433	ENSGT00940000160429	ENSGT00940000161198	ENSGT00940000158596	ENSGT00390000015775	ENSGT00390000010866	ENSGT01030000234574.A.a
Tetrapoda	ANCESTRAL SPECIES	97														ENSGT00940000166969.b	ENSGT00940000154766.a.a #20	ENSGT00940000155533.d #22	ENSGT00940000154952.a.b #23	ENSGT00940000154574.c #24	ENSGT00500000044852.a #26	ENSGT00390000012731.a.a #27	ENSGT00940000155171.a.b #28	ENSGT00940000155171.a.a ##28	ENSGT00390000000183 #29	ENSGT00550000074988 #30	ENSGT00390000014771.a #31	ENSGT01030000235349	ENSGT00940000158036 #33	ENSGT00940000155822	ENSGT01030000234607.A.a.a.a	ENSGT00390000015121	ENSGT00940000156424
Amniota	ANCESTRAL SPECIES	3	ENSGT00940000154187.a.a ##7	ENSGT00940000154187.a.b #7	ENSGT00940000157512 #8	ENSGT00730000111450 #10	ENSGT00940000155469 #12	ENSGT00940000160746 #13	ENSGT00390000018047 #14	ENSGT00940000160025 #15	ENSGT00940000158009 #16	ENSGT00390000012189 #17	ENSGT01090000260321	ENSGT00390000009802.b #18	ENSGT00390000009802.a #19	ENSGT00940000166969.b	ENSGT00940000154766.a.a #20	ENSGT00940000155533.d #22	ENSGT00940000154952.a.b #23	ENSGT00940000154574.c #24	ENSGT00500000044852.a #26	ENSGT00390000012731.a.a #27	ENSGT00940000155171.a.b #28	ENSGT00940000155171.a.a ##28	ENSGT00390000000183 #29	ENSGT00550000074988 #30	ENSGT00390000014771.a #31	ENSGT01030000235349	ENSGT00940000158036 #33	ENSGT00940000155822	ENSGT01030000234607.A.a.a.a	ENSGT00390000015121	ENSGT00940000156424
Mammalia	ANCESTRAL SPECIES	65	ENSGT00940000154187.a.a ##7	ENSGT00940000154187.a.b #7	ENSGT00940000157512 #8	ENSGT00730000111450 #10	ENSGT00940000155469 #12	ENSGT00940000160746 #13	ENSGT00390000018047 #14	ENSGT00940000160025 #15	ENSGT00940000158009 #16	ENSGT00390000012189 #17	ENSGT01090000260321	ENSGT00390000009802.b #18	ENSGT00390000009802.a #19	ENSGT00940000166969.b	ENSGT00940000154766.a.a #20	ENSGT00940000155533.d #22	ENSGT00940000154952.a.b #23	ENSGT00940000154574.c #24	ENSGT00500000044852.a #26	ENSGT00390000012731.a.a #27	ENSGT00940000155171.a.b #28	ENSGT00940000155171.a.a ##28	ENSGT00390000000183 #29	ENSGT00550000074988 #30	ENSGT00390000014771.a #31	ENSGT01030000235349	ENSGT00940000158036 #33	ENSGT00940000155822	ENSGT01030000234607.A.a.a.a	ENSGT00390000015121	ENSGT00940000156424
Theria	ANCESTRAL SPECIES	11	ENSGT00940000154187.a.a ##7	ENSGT00940000154187.a.b #7	ENSGT00940000157512 #8	ENSGT00730000111450 #10	ENSGT00940000155469 #12	ENSGT00940000160746 #13	ENSGT00390000018047 #14	ENSGT00940000160025 #15	ENSGT00940000158009 #16	ENSGT00390000012189 #17	ENSGT01090000260321	ENSGT00390000009802.b #18	ENSGT00390000009802.a #19	ENSGT00940000166969.b	ENSGT00940000154766.a.a #20	ENSGT00940000155533.d #22	ENSGT00940000154952.a.b #23	ENSGT00940000154574.c #24	ENSGT00500000044852.a #26	ENSGT00390000012731.a.a #27	ENSGT00940000155171.a.b #28	ENSGT00940000155171.a.a ##28	ENSGT00390000000183 #29	ENSGT00550000074988 #30	ENSGT00390000014771.a #31	ENSGT01100000263477.E #32	ENSGT00940000158036 #33	ENSGT00940000155822	ENSGT01030000234607.A.a.a.a	ENSGT00390000015121	ENSGT00940000156424
Eutheria	ANCESTRAL SPECIES	6	ENSGT00940000154187.a.a ##7	ENSGT00940000154187.a.b #7	ENSGT00940000157512 #8	ENSGT00730000111450 #10	ENSGT00940000155469 #12	ENSGT00940000160746 #13	ENSGT00390000018047 #14	ENSGT00940000160025 #15	ENSGT00940000158009 #16	ENSGT00390000012189 #17	ENSGT01090000260321	ENSGT00390000009802.b #18	ENSGT00390000009802.a #19	ENSGT00940000166969.b	ENSGT00940000154766.a.a #20	ENSGT00940000155533.d #22	ENSGT00940000154952.a.b #23	ENSGT00940000154574.c #24	ENSGT00500000044852.a #26	ENSGT00390000012731.a.a #27	ENSGT00940000155171.a.b #28	ENSGT00940000155171.a.a ##28	ENSGT00390000000183 #29	ENSGT00550000074988 #30	ENSGT00390000014771.a #31	ENSGT01100000263477.E #32	ENSGT00940000158036 #33	ENSGT00940000155822	ENSGT01030000234607.A.a.a.a	ENSGT00390000015121	ENSGT00940000156424
Boreoeutheria	ANCESTRAL SPECIES	9	ENSGT00940000154187.a.a ##7	ENSGT00940000154187.a.b #7	ENSGT00940000157512 #8	ENSGT00730000111450 #10	ENSGT00940000155469 #12	ENSGT00940000160746 #13	ENSGT00390000018047 #14	ENSGT00940000160025 #15	ENSGT00940000158009 #16	ENSGT00390000012189 #17	ENSGT01090000260321	ENSGT00390000009802.b #18	ENSGT00390000009802.a #19	ENSGT00940000166969.b	ENSGT00940000154766.a.a #20	ENSGT00940000155533.d #22	ENSGT00940000154952.a.b #23	ENSGT00940000154574.c #24	ENSGT00500000044852.a #26	ENSGT00390000012731.a.a #27	ENSGT00940000155171.a.b #28	ENSGT00940000155171.a.a ##28	ENSGT00390000000183 #29	ENSGT00550000074988 #30	ENSGT00390000014771.a #31	ENSGT01100000263477.E #32	ENSGT00940000158036 #33	ENSGT00940000155822	ENSGT01030000234607.A.a.a.a	ENSGT00390000015121	ENSGT00910000148650
Euarchontoglires	ANCESTRAL SPECIES	8	ENSGT00940000160496.b	ENSGT00940000154187.a.a ##7	ENSGT00940000154187.a.b #7	ENSGT00940000157512 #8	ENSGT00730000111450 #10	ENSGT00940000155469 #12	ENSGT00940000160746 #13	ENSGT00390000018047 #14	ENSGT00940000160025 #15	ENSGT00940000158009 #16	ENSGT00390000012189 #17	ENSGT00390000009802.b #18	ENSGT00390000009802.a #19	ENSGT00940000166969.b	ENSGT00940000154766.a.a #20	ENSGT00940000155533.d #22	ENSGT00940000154952.a.b #23	ENSGT00940000154574.c #24	ENSGT00500000044852.a #26	ENSGT00390000012731.a.a #27	ENSGT00940000155171.a.b #28	ENSGT00390000000183 #29	ENSGT00550000074988 #30	ENSGT00390000014771.a #31	ENSGT01100000263477.E #32	ENSGT00940000158036 #33	ENSGT00940000155822	ENSGT01030000234607.A.a.a.a	ENSGT00390000015121	ENSGT00910000148650	ENSGT00940000156424
Euarchontoglires_A	ANCESTRAL SPECIES	8	ENSGT00940000154673.a	ENSGT00940000160496.b	ENSGT00940000154187.a.a ##7	ENSGT00940000154187.a.b #7	ENSGT00940000157512 #8	ENSGT00730000111450 #10	ENSGT00940000155469 #12	ENSGT00940000160746 #13	ENSGT00390000018047 #14	ENSGT00940000160025 #15	ENSGT00940000158009 #16	ENSGT00390000012189 #17	ENSGT00390000009802.b #18	ENSGT00390000009802.a #19	ENSGT00940000154766.a.a #20	ENSGT00940000155533.d #22	ENSGT00940000154952.a.b #23	ENSGT00940000154574.c #24	ENSGT00500000044852.a #26	ENSGT00390000012731.a.a #27	ENSGT00940000155171.a.b #28	ENSGT00390000000183 #29	ENSGT00550000074988 #30	ENSGT00390000014771.a #31	ENSGT01100000263477.E #32	ENSGT00940000158036 #33	ENSGT00940000155822	ENSGT01030000234607.A.a.a.a	ENSGT00390000015121	ENSGT00940000156424	ENSGT00940000157811
Glires	ANCESTRAL SPECIES	7	ENSGT00940000154673.a	ENSGT00940000160496.b	ENSGT00940000154187.a.a ##7	ENSGT00940000154187.a.b #7	ENSGT00940000157512 #8	ENSGT00730000111450 #10	ENSGT00940000155469 #12	ENSGT00940000160746 #13	ENSGT00390000018047 #14	ENSGT00940000160025 #15	ENSGT00940000158009 #16	ENSGT00390000012189 #17	ENSGT00390000009802.b #18	ENSGT00390000009802.a #19	ENSGT00940000154766.a.a #20	ENSGT00940000155533.d #22	ENSGT00940000154952.a.b #23	ENSGT00940000154574.c #24	ENSGT00500000044852.a #26	ENSGT00390000012731.a.a #27	ENSGT00940000155171.a.b #28	ENSGT00390000000183 #29	ENSGT00550000074988 #30	ENSGT00390000014771.a #31	ENSGT01100000263477.E #32	ENSGT00940000158036 #33	ENSGT00940000155822	ENSGT01030000234607.A.a.a.a	ENSGT00390000015121	ENSGT00940000156424	ENSGT00940000157811
Rodentia	ANCESTRAL SPECIES	7	ENSGT00940000154673.a	ENSGT00940000160496.b	ENSGT00940000154187.a.a ##7	ENSGT00940000154187.a.b #7	ENSGT00940000157512 #8	ENSGT00730000111450 #10	ENSGT00940000155469 #12	ENSGT00940000160746 #13	ENSGT00390000018047 #14	ENSGT00940000160025 #15	ENSGT00940000158009 #16	ENSGT00390000012189 #17	ENSGT00390000009802.b #18	ENSGT00390000009802.a #19	ENSGT00940000154766.a.a #20	ENSGT00940000155533.d #22	ENSGT00940000154952.a.b #23	ENSGT00940000154574.c #24	ENSGT00500000044852.a #26	ENSGT00390000012731.a.a #27	ENSGT00940000155171.a.b #28	ENSGT00390000000183 #29	ENSGT00550000074988 #30	ENSGT00390000014771.a #31	ENSGT01100000263477.E #32	ENSGT00940000158036 #33	ENSGT00940000155822	ENSGT01030000234607.A.a.a.a	ENSGT00390000015121	ENSGT00940000156424	ENSGT00940000157811
Rodentia_B	ANCESTRAL SPECIES	4	ENSGT00940000154673.a	ENSGT00940000160496.b	ENSGT00940000154187.a.a ##7	ENSGT00940000154187.a.b #7	ENSGT00940000157512 #8	ENSGT00730000111450 #10	ENSGT00940000155469 #12	ENSGT00940000160746 #13	ENSGT00390000018047 #14	ENSGT00940000160025 #15	ENSGT00940000158009 #16	ENSGT00390000012189 #17	ENSGT00390000009802.b #18	ENSGT00390000009802.a #19	ENSGT00940000154766.a.a #20	ENSGT00940000155533.d #22	ENSGT00940000154952.a.b #23	ENSGT00940000154574.c #24	ENSGT00500000044852.a #26	ENSGT00390000012731.a.a #27	ENSGT00940000155171.a.b #28	ENSGT00390000000183 #29	ENSGT00550000074988 #30	ENSGT00390000014771.a #31	ENSGT01100000263477.E #32	ENSGT00940000158036 #33	ENSGT00940000155822	ENSGT01030000234607.A.a.a.a	ENSGT00390000015121	ENSGT00940000156424	ENSGT00940000157811
Myomorpha	ANCESTRAL SPECIES	5	ENSGT00940000154673.a	ENSGT00940000160496.b	ENSGT00940000154187.a.a ##7	ENSGT00940000154187.a.b #7	ENSGT00940000157512 #8	ENSGT00730000111450 #10	ENSGT00940000155469 #12	ENSGT00940000160746 #13	ENSGT00390000018047 #14	ENSGT00940000160025 #15	ENSGT00940000158009 #16	ENSGT00390000012189 #17	ENSGT00390000009802.b #18	ENSGT00390000009802.a #19	ENSGT00940000154766.a.a #20	ENSGT00940000155533.d #22	ENSGT00940000154952.a.b #23	ENSGT00940000154574.c #24	ENSGT00500000044852.a #26	ENSGT00390000012731.a.a #27	ENSGT00940000155171.a.b #28	ENSGT00390000000183 #29	ENSGT00550000074988 #30	ENSGT00390000014771.a #31	ENSGT01100000263477.E #32	ENSGT00940000158036 #33	ENSGT00940000155822	ENSGT01030000234607.A.a.a.a	ENSGT00390000015121	ENSGT00940000156424	ENSGT00940000157811
Muroidea	ANCESTRAL SPECIES	4	ENSGT00940000154673.a	ENSGT00940000160496.b	ENSGT00940000154187.a.a ##7	ENSGT00940000154187.a.b #7	ENSGT00940000157512 #8	ENSGT00730000111450 #10	ENSGT00940000155469 #12	ENSGT00940000160746 #13	ENSGT00390000018047 #14	ENSGT00940000160025 #15	ENSGT00940000158009 #16	ENSGT00390000012189 #17	ENSGT00390000009802.b #18	ENSGT00390000009802.a #19	ENSGT00940000154766.a.a #20	ENSGT00940000155533.d #22	ENSGT00940000154952.a.b #23	ENSGT00940000154574.c #24	ENSGT00500000044852.a #26	ENSGT00390000012731.a.a #27	ENSGT00940000155171.a.b #28	ENSGT00390000000183 #29	ENSGT00550000074988 #30	ENSGT00390000014771.a #31	ENSGT01100000263477.E #32	ENSGT00940000158036 #33	ENSGT00940000153165.a.b.a.a.a.a.a	ENSGT00940000155822	ENSGT01030000234607.A.a.a.a	ENSGT00390000015121	ENSGT00940000156424
Muroidea_A	ANCESTRAL SPECIES	11	ENSGT00940000154673.a	ENSGT00940000160496.b	ENSGT00940000154187.a.a ##7	ENSGT00940000154187.a.b #7	ENSGT00940000157512 #8	ENSGT00730000111450 #10	ENSGT00940000155469 #12	ENSGT00940000160746 #13	ENSGT00390000018047 #14	ENSGT00940000160025 #15	ENSGT00940000158009 #16	ENSGT00390000012189 #17	ENSGT00390000009802.b #18	ENSGT00390000009802.a #19	ENSGT00940000154766.a.a #20	ENSGT00940000155533.d #22	ENSGT00940000154952.a.b #23	ENSGT00940000154574.c #24	ENSGT00500000044852.a #26	ENSGT00390000012731.a.a #27	ENSGT00940000155171.a.b #28	ENSGT00390000000183 #29	ENSGT00550000074988 #30	ENSGT00390000014771.a #31	ENSGT01100000263477.E #32	ENSGT00940000158036 #33	ENSGT00940000155274.a.b.c.b	ENSGT00940000153165.a.a.c.a	ENSGT00940000155822	ENSGT01030000234607.A.a.a.a	ENSGT00390000015121
Murinae	ANCESTRAL SPECIES	24	ENSGT00940000154673.a	ENSGT00940000160496.b	ENSGT00940000154187.a.a ##7	ENSGT00940000154187.a.b #7	ENSGT00940000157512 #8	ENSGT00730000111450 #10	ENSGT00940000155469 #12	ENSGT00940000160746 #13	ENSGT00390000018047 #14	ENSGT00940000160025 #15	ENSGT00940000158009 #16	ENSGT00390000012189 #17	ENSGT00390000009802.b #18	ENSGT00390000009802.a #19	ENSGT00940000154766.a.a #20	ENSGT00940000155533.d #22	ENSGT00940000154952.a.b #23	ENSGT00940000154574.c #24	ENSGT00500000044852.a #26	ENSGT00390000012731.a.a #27	ENSGT00940000155171.a.b #28	ENSGT00390000000183 #29	ENSGT00550000074988 #30	ENSGT00390000014771.a #31	ENSGT01100000263477.E #32	ENSGT00940000158036 #33	ENSGT00940000155274.a.b.c.b	ENSGT00940000153165.a.a.c.a
Mus	ANCESTRAL SPECIES	22	ENSGT00940000154673.a	ENSGT00940000160496.b	ENSGT00940000154187.a.a ##7	ENSGT00940000154187.a.b #7	ENSGT00940000157512 #8	ENSGT00730000111450 #10	ENSGT00940000155469 #12	ENSGT00940000160746 #13	ENSGT00390000018047 #14	ENSGT00940000160025 #15	ENSGT00940000158009 #16	ENSGT00390000012189 #17	ENSGT00390000009802.b #18	ENSGT00390000009802.a #19	ENSGT00940000154766.a.a #20	ENSGT00940000155533.d #22	ENSGT00940000154952.a.b #23	ENSGT00940000154574.c #24	ENSGT00500000044852.a #26	ENSGT00390000012731.a.a #27	ENSGT00940000155171.a.b #28	ENSGT00390000000183 #29	ENSGT00550000074988 #30	ENSGT00390000014771.a #31	ENSGT01100000263477.E #32	ENSGT00940000158036 #33
Mus_A	ANCESTRAL SPECIES	13	ENSGT00940000160496.b	ENSGT00940000154187.a.a.i ##7	ENSGT00940000154187.a.b #7	ENSGT00940000157512 #8	ENSGT00860000135677 #9	ENSGT00730000111450 #10	ENSGT00940000155469 #12	ENSGT00940000160746 #13	ENSGT00390000018047 #14	ENSGT00940000160025 #15	ENSGT00940000158009 #16	ENSGT00390000012189 #17	ENSGT00390000009802.b #18	ENSGT00390000009802.a #19	ENSGT00940000154766.a.a #20	ENSGT00940000155533.d #22	ENSGT00940000154952.a.b #23	ENSGT00940000154574.c #24	ENSGT00500000044852.a #26	ENSGT00390000012731.a.a #27	ENSGT00940000155171.a.b #28	ENSGT00390000000183 #29	ENSGT00550000074988 #30	ENSGT00390000014771.a #31	ENSGT01100000263477.E #32	ENSGT00940000158036 #33	ENSGT00940000157222	ENSGT00950000182878.b.b.o	ENSGT00390000018110 #34	ENSGT00940000162862 #35	ENSGT00940000154181.a #36
Mus_B	ANCESTRAL SPECIES	12	ENSGT00940000154187.a.a.i ##7	ENSGT00390000005330.cb	ENSGT00940000154187.a.b #7	ENSGT00940000157512 #8	ENSGT00860000135677 #9	ENSGT00730000111450 #10	ENSGT00940000155469 #12	ENSGT00940000160746 #13	ENSGT00390000018047 #14	ENSGT00940000160025 #15	ENSGT00940000158009 #16	ENSGT00390000012189 #17	ENSGT00390000009802.b #18	ENSGT00390000009802.a #19	ENSGT00940000154766.a.a #20	ENSGT00940000155533.d #22	ENSGT00940000154952.a.b #23	ENSGT00940000154574.c #24	ENSGT00500000044852.a #26	ENSGT00390000012731.a.a #27	ENSGT00940000155171.a.b #28	ENSGT00390000000183 #29	ENSGT00550000074988 #30	ENSGT00390000014771.a #31	ENSGT01100000263477.E #32	ENSGT00940000158036 #33	ENSGT00940000157222	ENSGT00950000182878.b.b.o	ENSGT00390000018110 #34	ENSGT00940000162862 #35	ENSGT00940000154181.a #36
Mus_C	ANCESTRAL SPECIES	28	ENSGT00940000154187.a.a.i ##7	ENSGT00390000005330.cb	ENSGT00940000154187.a.b #7	ENSGT00940000157512 #8	ENSGT00860000135677 #9	ENSGT00730000111450 #10	ENSGT00940000155469 #12	ENSGT00940000160746 #13	ENSGT00390000018047 #14	ENSGT00940000160025 #15	ENSGT00940000158009 #16	ENSGT00390000012189 #17	ENSGT00390000009802.b #18	ENSGT00390000009802.a #19	ENSGT00940000154766.a.a #20	ENSGT00940000155533.d #22	ENSGT00940000154952.a.b #23	ENSGT00940000154574.c #24	ENSGT00500000044852.a #26	ENSGT00390000012731.a.a #27	ENSGT00940000155171.a.b #28	ENSGT00390000000183 #29	ENSGT00550000074988 #30	ENSGT00390000014771.a #31	ENSGT01100000263477.E #32	ENSGT00940000158036 #33	ENSGT00940000157222	ENSGT00950000182878.b.b.o	ENSGT00390000018110 #34	ENSGT00940000162862 #35	ENSGT00940000154181.a #36
spretus	MODERN SPECIES	6	Cdh12 (MGP_SPRETEiJ_G0020585) #7	Cdh18 (MGP_SPRETEiJ_G0020586) #8	MGP_SPRETEiJ_G0020587 #9	Basp1 (MGP_SPRETEiJ_G0020588) #10	MGP_SPRETEiJ_G0020589 #11	Myo10 (MGP_SPRETEiJ_G0020590) #12	Retreg1 (MGP_SPRETEiJ_G0020591) #13	Zfp622 (MGP_SPRETEiJ_G0020592) #14	Marchf11 (MGP_SPRETEiJ_G0020593) #15	Fbxl7 (MGP_SPRETEiJ_G0020594) #16	Ank (MGP_SPRETEiJ_G0020595) #17	Otulin (MGP_SPRETEiJ_G0020596) #18	Otulinl (MGP_SPRETEiJ_G0020597) #19	Trio (MGP_SPRETEiJ_G0020598) #20	MGP_SPRETEiJ_G0020599 #21	Dnah5 (MGP_SPRETEiJ_G0020600) #22	Ctnnd2 (MGP_SPRETEiJ_G0020601) #23	Dap (MGP_SPRETEiJ_G0020602) #24	MGP_SPRETEiJ_G0020603 #25	Ankrd33b (MGP_SPRETEiJ_G0020604) #26	Ropn1l (MGP_SPRETEiJ_G0020605) #27	Marchf6 (MGP_SPRETEiJ_G0020606) #28	Cmbl (MGP_SPRETEiJ_G0020607) #29	Cct5 (MGP_SPRETEiJ_G0020608) #30	Atpsckmt (MGP_SPRETEiJ_G0020609) #31	Tas2r119 (MGP_SPRETEiJ_G0020610) #32	Sema5a (MGP_SPRETEiJ_G0020611) #33	Cpq (MGP_SPRETEiJ_G0020613) #34	Tspyl5 (MGP_SPRETEiJ_G0020614) #35	Mtdh (MGP_SPRETEiJ_G0020615) #36	Laptm4b (MGP_SPRETEiJ_G0020616) #37
Steppe mouse	MODERN SPECIES	3249				ENSMSIG00000021319	Myo10 (ENSMSIG00000021199) #12	Retreg1 (ENSMSIG00000021158) #13	Zfp622 (ENSMSIG00000021146) #14	ENSMSIG00000021139	ENSMSIG00000021134	Marchf11 (ENSMSIG00000021111) #15	Fbxl7 (ENSMSIG00000021074) #16	Ank (ENSMSIG00000020995) #17	Otulin (ENSMSIG00000020973) #18	Otulinl (ENSMSIG00000020899) #19	Trio (ENSMSIG00000020539) #20	Dnah5 (ENSMSIG00000020379) #22
Mouse	MODERN SPECIES	6	Cdh9 (ENSMUSG00000025370)	Cdh10 (ENSMUSG00000022321) ##7	Cdh12 (ENSMUSG00000040452) #7	Acot10 (ENSMUSG00000047565)	Cdh18 (ENSMUSG00000040420) #8	Basp1 (ENSMUSG00000045763) #10	Myo10 (ENSMUSG00000022272) #12	Retreg1 (ENSMUSG00000022270) #13	Zfp622 (ENSMUSG00000052253) #14	Marchf11 (ENSMUSG00000022269) #15	Fbxl7 (ENSMUSG00000043556) #16	Ank (ENSMUSG00000022265) #17	Otulin (ENSMUSG00000046034) #18	Otulinl (ENSMUSG00000056069) #19	Trio (ENSMUSG00000022263) #20	Dnah5 (ENSMUSG00000022262) #22	Ctnnd2 (ENSMUSG00000022240) #23	Dap (ENSMUSG00000039168) #24	Ankrd33b (ENSMUSG00000022237) #26	Ropn1l (ENSMUSG00000022236) #27	Marchf6 (ENSMUSG00000039100) #28	Cmbl (ENSMUSG00000022235) #29	Cct5 (ENSMUSG00000022234) #30	Atpsckmt (ENSMUSG00000039065) #31	Tas2r119 (ENSMUSG00000045267) #32	Sema5a (ENSMUSG00000022231) #33	Sdc2 (ENSMUSG00000022261)	Cpq (ENSMUSG00000039007) #34	Tspyl5 (ENSMUSG00000038984) #35	Mtdh (ENSMUSG00000022255) #36	Laptm4b (ENSMUSG00000022257) #37
Ryukyu mouse	MODERN SPECIES	6	Cdh10 (MGP_CAROLIEiJ_G0019690) ##7	Cdh12 (MGP_CAROLIEiJ_G0019691) #7	Cdh18 (MGP_CAROLIEiJ_G0019692) #8	MGP_CAROLIEiJ_G0019693 #9	Basp1 (MGP_CAROLIEiJ_G0019694) #10	MGP_CAROLIEiJ_G0019695	Myo10 (MGP_CAROLIEiJ_G0019696) #12	Retreg1 (MGP_CAROLIEiJ_G0019697) #13	Zfp622 (MGP_CAROLIEiJ_G0019698) #14	MGP_CAROLIEiJ_G0019699 #15	Fbxl7 (MGP_CAROLIEiJ_G0019700) #16	Ank (MGP_CAROLIEiJ_G0019701) #17	Otulin (MGP_CAROLIEiJ_G0019702) #18	Otulinl (MGP_CAROLIEiJ_G0019703) #19	Trio (MGP_CAROLIEiJ_G0019704) #20	Dnah5 (MGP_CAROLIEiJ_G0019705) #22	Ctnnd2 (MGP_CAROLIEiJ_G0019706) #23	Dap (MGP_CAROLIEiJ_G0019707) #24	Ankrd33b (MGP_CAROLIEiJ_G0019708) #26	Ropn1l (MGP_CAROLIEiJ_G0019709) #27	Marchf6 (MGP_CAROLIEiJ_G0019710) #28	Cmbl (MGP_CAROLIEiJ_G0019711) #29	Cct5 (MGP_CAROLIEiJ_G0019712) #30	Atpsckmt (MGP_CAROLIEiJ_G0019713) #31	Tas2r119 (MGP_CAROLIEiJ_G0019714) #32	Sema5a (MGP_CAROLIEiJ_G0019715) #33	Sdc2 (MGP_CAROLIEiJ_G0019716)	Cpq (MGP_CAROLIEiJ_G0019717) #34	Tspyl5 (MGP_CAROLIEiJ_G0019718) #35	Mtdh (MGP_CAROLIEiJ_G0019719) #36	Laptm4b (MGP_CAROLIEiJ_G0019720) #37
Shrew mouse	MODERN SPECIES	2	Cdh10 (MGP_PahariEiJ_G0016066) ##7	Cdh12 (MGP_PahariEiJ_G0016067) #7	Cdh18 (MGP_PahariEiJ_G0016068) #8	MGP_PahariEiJ_G0016069	Basp1 (MGP_PahariEiJ_G0016070) #10	MGP_PahariEiJ_G0016071	Myo10 (MGP_PahariEiJ_G0016072) #12	Retreg1 (MGP_PahariEiJ_G0016073) #13	Zfp622 (MGP_PahariEiJ_G0016074) #14	Marchf11 (MGP_PahariEiJ_G0016075) #15	Fbxl7 (MGP_PahariEiJ_G0016076) #16	Ank (MGP_PahariEiJ_G0016077) #17	Otulin (MGP_PahariEiJ_G0016078) #18	Otulinl (MGP_PahariEiJ_G0016079) #19	Trio (MGP_PahariEiJ_G0016080) #20	Dnah5 (MGP_PahariEiJ_G0016081) #22	Ctnnd2 (MGP_PahariEiJ_G0016082) #23	Dap (MGP_PahariEiJ_G0016083) #24	Ankrd33b (MGP_PahariEiJ_G0016084) #26	Ropn1l (MGP_PahariEiJ_G0016085) #27	Marchf6 (MGP_PahariEiJ_G0016086) #28	Cmbl (MGP_PahariEiJ_G0016087) #29	MGP_PahariEiJ_G0016088 #30	Atpsckmt (MGP_PahariEiJ_G0016089) #31	Tas2r119 (MGP_PahariEiJ_G0016090) #32	MGP_PahariEiJ_G0016091 #33
Rat	MODERN SPECIES	11	AABR07008724.1 (ENSRNOG00000019037)	ENSRNOG00000068483	Cdh18 (ENSRNOG00000010535) #8	Basp1 (ENSRNOG00000066065) #10	Cwc15-ps3 (ENSRNOG00000025157)	Myo10 (ENSRNOG00000010161) #12	Zfp622 (ENSRNOG00000010589) #14	AABR07008911.1 (ENSRNOG00000056969)	Marchf11 (ENSRNOG00000024461) #15	Fbxl7 (ENSRNOG00000024433) #16	Ankh (ENSRNOG00000010960) #17	Otulin (ENSRNOG00000012017) #18	AABR07008940.1 (ENSRNOG00000011997)	Otulinl (ENSRNOG00000012109) #19	Trio (ENSRNOG00000012148) #20	Dnah5 (ENSRNOG00000048363) #22	Ctnnd2 (ENSRNOG00000010649) #23	Dap (ENSRNOG00000010747)	Ankrd33b (ENSRNOG00000010888) #26	Ropn1l (ENSRNOG00000042781) #27	Marchf6 (ENSRNOG00000011066) #28	Cmbl (ENSRNOG00000011260) #29	Cct5 (ENSRNOG00000011632) #30	Atpsckmt (ENSRNOG00000022347) #31	Tas2r119 (ENSRNOG00000011963) #32	Sema5a (ENSRNOG00000011977) #33	LOC108350175 (ENSRNOG00000068153)	LOC100909688 (ENSRNOG00000049662)	ENSRNOG00000065249	ENSRNOG00000066460	AABR07009105.1 (ENSRNOG00000053325)
Cricetidae	ANCESTRAL SPECIES	11	ENSGT00940000154673.a	ENSGT00940000160496.b	ENSGT00940000154187.a.a.k ##7	ENSGT00940000154187.a.b #7	ENSGT00940000157512 #8	ENSGT00730000111450 #10	ENSGT00940000155469 #12	ENSGT00940000160746 #13	ENSGT00390000018047 #14	ENSGT00940000160025 #15	ENSGT00940000158009 #16	ENSGT00390000012189 #17	ENSGT00390000009802.b #18	ENSGT00390000009802.a #19	ENSGT00940000154766.a.a #20	ENSGT00940000155533.d #22	ENSGT00940000154952.a.b #23	ENSGT00940000154574.c #24	ENSGT00500000044852.a #26	ENSGT00390000012731.a.a #27	ENSGT00940000155171.a.b #28	ENSGT00390000000183 #29	ENSGT00550000074988 #30	ENSGT00390000014771.a #31	ENSGT01100000263477.E #32	ENSGT00940000158036 #33	ENSGT00940000155274.a.b.c.b	ENSGT00940000155822	ENSGT01030000234607.A.a.a.a	ENSGT00390000015121	ENSGT00940000156424
Cricetinae	ANCESTRAL SPECIES	7	ENSGT00940000154673.a	ENSGT00940000160496.b	ENSGT00940000154187.a.a.k ##7	ENSGT00940000154187.a.b #7	ENSGT00940000157512 #8	ENSGT00730000111450 #10	ENSGT00940000155469 #12	ENSGT00940000160746 #13	ENSGT00390000018047 #14	ENSGT00940000160025 #15	ENSGT00940000158009 #16	ENSGT00390000012189 #17	ENSGT00390000009802.b #18	ENSGT00390000009802.a #19	ENSGT00940000154766.a.a #20	ENSGT00940000155533.d #22	ENSGT00940000154952.a.b #23	ENSGT00940000154574.c #24	ENSGT00500000044852.a #26	ENSGT00390000012731.a.a #27	ENSGT00940000155171.a.b #28	ENSGT00390000000183 #29	ENSGT00550000074988 #30	ENSGT00390000014771.a #31	ENSGT01100000263477.E #32	ENSGT00940000158036 #33	ENSGT00940000155274.a.b.c.b	ENSGT00940000153165.a.b.a.a.a.a.a.d	ENSGT00940000155274.a.b.c.a.b.c	ENSGT00940000154251.A	ENSGT00940000155274.a.b.c.a.b.d
Chinese hamster chok1gshd	MODERN SPECIES	1	Cdh9 (ENSCGRG00001007635)	Cdh10 (ENSCGRG00001001483) ##7	Cdh12 (ENSCGRG00001015709) #7	Cdh18 (ENSCGRG00001012079) #8	Basp1 (ENSCGRG00001010849) #10	Myo10 (ENSCGRG00001006922) #12	Retreg1 (ENSCGRG00001003409) #13	Zfp622 (ENSCGRG00001024661) #14	Marchf11 (ENSCGRG00001000995) #15	Fbxl7 (ENSCGRG00001002330) #16	Ank (ENSCGRG00001007186) #17	Otulin (ENSCGRG00001009097) #18	Otulinl (ENSCGRG00001013918) #19	Trio (ENSCGRG00001018514) #20	ENSCGRG00001007408	Dnah5 (ENSCGRG00001002726) #22	ENSCGRG00001008572	ENSCGRG00001009256	Ctnnd2 (ENSCGRG00001012344) #23	ENSCGRG00001009079	Dap (ENSCGRG00001007075) #24	Ankrd33b (ENSCGRG00001016919) #26	Ropn1l (ENSCGRG00001000818) #27	Marchf6 (ENSCGRG00001001973) #28	Cmbl (ENSCGRG00001002936) #29	Cct5 (ENSCGRG00001003625) #30	Atpsckmt (ENSCGRG00001004624) #31	ENSCGRG00001017092	ENSCGRG00001005665 #32	Sema5a (ENSCGRG00001006570) #33	ENSCGRG00001021480
Golden Hamster	MODERN SPECIES	729					Cdh12 (ENSMAUG00000014852) #7	Cdh18 (ENSMAUG00000016819) #8	Myo10 (ENSMAUG00000018170) #12	Retreg1 (ENSMAUG00000000079) #13	Zfp622 (ENSMAUG00000010395) #14	Marchf11 (ENSMAUG00000019378) #15	Fbxl7 (ENSMAUG00000002455) #16	Ank (ENSMAUG00000000192) #17	Otulin (ENSMAUG00000004691) #18	ENSMAUG00000007540 #19	Trio (ENSMAUG00000006892) #20	Dnah5 (ENSMAUG00000000528) #22
Cricetidae_B	ANCESTRAL SPECIES	37	ENSGT00940000154673.a	ENSGT00940000160496.b	ENSGT00940000154187.a.a.k ##7	ENSGT00940000154187.a.b #7	ENSGT00940000157512 #8	ENSGT00730000111450 #10	ENSGT00940000155469 #12	ENSGT00940000160746 #13	ENSGT00390000018047 #14	ENSGT00940000160025 #15	ENSGT00940000158009 #16	ENSGT00390000012189 #17	ENSGT00390000009802.b #18	ENSGT00390000009802.a #19	ENSGT00940000154766.a.a #20	ENSGT00940000155533.d #22	ENSGT00940000154952.a.b #23	ENSGT00940000154574.c #24	ENSGT00500000044852.a #26	ENSGT00390000012731.a.a #27	ENSGT00940000155171.a.b #28	ENSGT00390000000183 #29	ENSGT00550000074988 #30	ENSGT00390000014771.a #31	ENSGT01100000263477.E #32	ENSGT00940000158036 #33	ENSGT00940000155274.a.b.c.b	ENSGT00940000155274.a.b.c.a.a.b	ENSGT00940000153165.a.b.a.a.a.b.a.a.a.b	ENSGT00940000153165.a.b.a.a.a.b.a.a.b	ENSGT00940000155822
Prairie vole	MODERN SPECIES	6	Cdh9 (ENSMOCG00000000711)	Cdh10 (ENSMOCG00000012651) ##7	Cdh12 (ENSMOCG00000001651) #7	Cdh18 (ENSMOCG00000016086) #8	Basp1 (ENSMOCG00000001482) #10	Myo10 (ENSMOCG00000001624) #12	Retreg1 (ENSMOCG00000022687) #13	ENSMOCG00000014111 #14	Marchf11 (ENSMOCG00000005112) #15	Fbxl7 (ENSMOCG00000022587) #16	ENSMOCG00000003518	Ank (ENSMOCG00000015187) #17	Otulin (ENSMOCG00000018018) #18	Otulinl (ENSMOCG00000014807) #19	Trio (ENSMOCG00000017194) #20	Dnah5 (ENSMOCG00000002151) #22	Ctnnd2 (ENSMOCG00000011727) #23	ENSMOCG00000008873	Dap (ENSMOCG00000007932) #24	Ankrd33b (ENSMOCG00000012066) #26	Ropn1l (ENSMOCG00000019170) #27	Marchf6 (ENSMOCG00000005447) #28	Cmbl (ENSMOCG00000000662) #29	Cct5 (ENSMOCG00000011025) #30	Atpsckmt (ENSMOCG00000010214) #31	Sema5a (ENSMOCG00000012532) #33	Zfp712 (ENSMOCG00000002167)	ENSMOCG00000012715	ENSMOCG00000017127	Rslcan18 (ENSMOCG00000000365)	Zfp748 (ENSMOCG00000002232)
Northern American deer mouse	MODERN SPECIES	6	ENSPEMG00000025057 ##7	ENSPEMG00000009396	Cdh12 (ENSPEMG00000019791) #7	Cdh18 (ENSPEMG00000019662) #8	Myo10 (ENSPEMG00000019555) #12	Retreg1 (ENSPEMG00000000999) #13	Zfp622 (ENSPEMG00000019901) #14	Marchf11 (ENSPEMG00000020080) #15	Fbxl7 (ENSPEMG00000019691) #16	ENSPEMG00000028925	Ank (ENSPEMG00000021948) #17	Otulin (ENSPEMG00000021987) #18	Otulinl (ENSPEMG00000021713) #19	ENSPEMG00000029934	Trio (ENSPEMG00000023464) #20	Dnah5 (ENSPEMG00000021827) #22	ENSPEMG00000030112	Ctnnd2 (ENSPEMG00000023801) #23	Dap (ENSPEMG00000030453) #24	Ankrd33b (ENSPEMG00000022398) #26	Ropn1l (ENSPEMG00000021994) #27	Marchf6 (ENSPEMG00000023219) #28	Cmbl (ENSPEMG00000023901) #29	ENSPEMG00000022370 #30	Atpsckmt (ENSPEMG00000014425) #31	Tas2r119 (ENSPEMG00000030438) #32	Sema5a (ENSPEMG00000021663) #33	Zfp712 (ENSPEMG00000021548)	ENSPEMG00000030912	ENSPEMG00000008961	ENSPEMG00000027704
Upper Galilee mountains blind mole rat	MODERN SPECIES	1778		Cdh18 (ENSNGAG00000022603) #8	Basp1 (ENSNGAG00000001116) #10	ENSNGAG00000004229	Myo10 (ENSNGAG00000013287) #12	Retreg1 (ENSNGAG00000011943) #13	Zfp622 (ENSNGAG00000012958) #14	Marchf11 (ENSNGAG00000016639) #15	Fbxl7 (ENSNGAG00000018840) #16	ENSNGAG00000020279	Ank (ENSNGAG00000021196) #17	Otulin (ENSNGAG00000021789) #18	Otulinl (ENSNGAG00000022804) #19	ENSNGAG00000007346	Trio (ENSNGAG00000022178) #20	Dnah5 (ENSNGAG00000000799) #22
Lesser Egyptian jerboa	MODERN SPECIES	48	Cdh10 (ENSJJAG00000013847) ##7	ENSJJAG00000011202	ENSJJAG00000014686	ENSJJAG00000014963	Cdh12 (ENSJJAG00000018602) #7	Cdh18 (ENSJJAG00000018092) #8	Myo10 (ENSJJAG00000013696) #12	Retreg1 (ENSJJAG00000007779) #13	Zfp622 (ENSJJAG00000000941) #14	ENSJJAG00000019583	Fbxl7 (ENSJJAG00000013915) #16	Ank (ENSJJAG00000010626) #17	Otulin (ENSJJAG00000021711) #18	Otulinl (ENSJJAG00000019612) #19	Trio (ENSJJAG00000019719) #20	Dnah5 (ENSJJAG00000021504) #22	Ctnnd2 (ENSJJAG00000015243) #23	ENSJJAG00000014543	Dap (ENSJJAG00000022373) #24	Ankrd33b (ENSJJAG00000016371) #26	Prr16 (ENSJJAG00000016970)	ENSJJAG00000006199	ENSJJAG00000016100	Fam170a (ENSJJAG00000003910)	Smim3 (ENSJJAG00000011996)	Dctn4 (ENSJJAG00000021369)	Rbm22 (ENSJJAG00000009565)	Myoz3 (ENSJJAG00000023711)	Synpo (ENSJJAG00000022414)	Ndst1 (ENSJJAG00000014514)	ENSJJAG00000015678
Kangaroo rat	MODERN SPECIES	340	ENSDORG00000028346	Cdh9 (ENSDORG00000002684)	Cdh10 (ENSDORG00000007213) ##7	ENSDORG00000001664	Cdh18 (ENSDORG00000009490) #8	ENSDORG00000026313	Myo10 (ENSDORG00000005883) #12	Retreg1 (ENSDORG00000000940) #13	Zfp622 (ENSDORG00000000939) #14	Marchf11 (ENSDORG00000007351) #15	Fbxl7 (ENSDORG00000030041) #16	Ank (ENSDORG00000001662) #17	Otulin (ENSDORG00000003904) #18	Otulinl (ENSDORG00000003148) #19	Trio (ENSDORG00000011919) #20	Dnah5 (ENSDORG00000012492) #22	ENSDORG00000029046	ENSDORG00000028473 #23	Dap (ENSDORG00000023386) #24	Ropn1l (ENSDORG00000004133) #27	Marchf6 (ENSDORG00000009942) #28	Cmbl (ENSDORG00000008783) #29	Cct5 (ENSDORG00000008787) #30	Sema5a (ENSDORG00000009214) #33	ENSDORG00000030090	Fastkd3 (ENSDORG00000028341)	Cfap90 (ENSDORG00000013670)	Adcy2 (ENSDORG00000010924)	Tent4a (ENSDORG00000023216)	Srd5a1 (ENSDORG00000010248)	Nsun2 (ENSDORG00000010247)
Rodentia_A	ANCESTRAL SPECIES	7	ENSGT00940000154673.a	ENSGT00940000160496.b	ENSGT00940000154187.a.a ##7	ENSGT00940000154187.a.b #7	ENSGT00940000157512 #8	ENSGT00730000111450 #10	ENSGT00940000155469 #12	ENSGT00940000160746 #13	ENSGT00390000018047 #14	ENSGT00940000160025 #15	ENSGT00940000158009 #16	ENSGT00390000012189 #17	ENSGT00390000009802.b #18	ENSGT00390000009802.a #19	ENSGT00940000154766.a.a #20	ENSGT00940000155533.d #22	ENSGT00940000154952.a.b #23	ENSGT00940000154574.c #24	ENSGT00500000044852.a #26	ENSGT00390000012731.a.a #27	ENSGT00940000155171.a.b #28	ENSGT00390000000183 #29	ENSGT00550000074988 #30	ENSGT00390000014771.a #31	ENSGT01100000263477.E #32	ENSGT00940000158036 #33	ENSGT00940000155822	ENSGT01030000234607.A.a.a.a	ENSGT00390000015121	ENSGT00940000156424	ENSGT00940000157811
Hystricomorpha	ANCESTRAL SPECIES	31	ENSGT00940000154673.a	ENSGT00940000160496.b	ENSGT00940000154187.a.a ##7	ENSGT00940000154187.a.b #7	ENSGT00940000157512 #8	ENSGT00730000111450 #10	ENSGT00940000155469 #12	ENSGT00940000160746 #13	ENSGT00390000018047 #14	ENSGT00940000160025 #15	ENSGT00940000158009 #16	ENSGT00390000012189 #17	ENSGT00390000009802.b #18	ENSGT00390000009802.a #19	ENSGT00940000154766.a.a #20	ENSGT00940000155533.d #22	ENSGT00940000154952.a.b #23	ENSGT00940000154574.c #24	ENSGT00500000044852.a #26	ENSGT00390000012731.a.a #27	ENSGT00940000155171.a.b #28	ENSGT00390000000183 #29	ENSGT00550000074988 #30	ENSGT00390000014771.a #31	ENSGT01100000263477.E #32	ENSGT00940000158036 #33	ENSGT00940000155822	ENSGT01030000234607.A.a.a.a	ENSGT00390000015121	ENSGT00940000156424	ENSGT00940000157811
Hystricomorpha_a	ANCESTRAL SPECIES	29	ENSGT00940000154673.a	ENSGT00940000160496.b	ENSGT00940000154187.a.a ##7	ENSGT00940000154187.a.b #7	ENSGT00940000157512 #8	ENSGT00730000111450 #10	ENSGT00940000155469 #12	ENSGT00940000160746 #13	ENSGT00390000018047 #14	ENSGT00940000160025 #15	ENSGT00940000158009 #16	ENSGT00390000012189 #17	ENSGT00390000009802.b #18	ENSGT00390000009802.a #19	ENSGT00940000154766.a.a #20	ENSGT00940000155533.d #22	ENSGT00940000154952.a.b #23	ENSGT00940000154574.c #24	ENSGT00500000044852.a #26	ENSGT00390000012731.a.a #27	ENSGT00940000155171.a.b #28	ENSGT00390000000183 #29	ENSGT00550000074988 #30	ENSGT00390000014771.a #31	ENSGT01100000263477.E #32	ENSGT00940000158036 #33	ENSGT00940000155822	ENSGT01030000234607.A.a.a.a	ENSGT00390000015121	ENSGT00940000156424	ENSGT00940000157811
Hystricomorpha_b	ANCESTRAL SPECIES	60	ENSGT00940000154673.a	ENSGT00940000160496.b	ENSGT00940000154187.a.a ##7	ENSGT00940000154187.a.b #7	ENSGT00940000157512 #8	ENSGT00730000111450 #10	ENSGT00940000155469 #12	ENSGT00940000160746 #13	ENSGT00390000018047 #14	ENSGT00940000160025 #15	ENSGT00940000158009 #16	ENSGT00390000012189 #17	ENSGT00390000009802.b #18	ENSGT00390000009802.a #19	ENSGT00940000154766.a.a #20	ENSGT00940000155533.d #22	ENSGT00940000154952.a.b #23	ENSGT00940000154574.c #24	ENSGT00500000044852.a #26	ENSGT00390000012731.a.a #27	ENSGT00940000155171.a.b #28	ENSGT00390000000183 #29	ENSGT00550000074988 #30	ENSGT00390000014771.a #31	ENSGT00940000158036 #33	ENSGT00940000155822	ENSGT01030000234607.A.a.a.a	ENSGT00390000015121	ENSGT00940000156424	ENSGT00940000157811	ENSGT00950000182886.b.b
Long-tailed chinchilla	MODERN SPECIES	133	CDH6 (ENSCLAG00000007448)	CDH9 (ENSCLAG00000008482)	CDH10 (ENSCLAG00000011884) ##7	CDH12 (ENSCLAG00000013527) #7	CDH18 (ENSCLAG00000011951) #8	BASP1 (ENSCLAG00000015086) #10	MYO10 (ENSCLAG00000014503) #12	RETREG1 (ENSCLAG00000014211) #13	ZNF622 (ENSCLAG00000011494) #14	MARCHF11 (ENSCLAG00000010027) #15	FBXL7 (ENSCLAG00000014128) #16	ANKH (ENSCLAG00000011007) #17	OTULIN (ENSCLAG00000012182) #18	OTULINL (ENSCLAG00000015072) #19	TRIO (ENSCLAG00000009822) #20	DNAH5 (ENSCLAG00000013894) #22	CTNND2 (ENSCLAG00000010220) #23	DAP (ENSCLAG00000008486) #24	ANKRD33B (ENSCLAG00000008394) #26	ROPN1L (ENSCLAG00000007892) #27	MARCHF6 (ENSCLAG00000013772) #28	CMBL (ENSCLAG00000012029) #29	CCT5 (ENSCLAG00000008074) #30	ATPSCKMT (ENSCLAG00000007449) #31	ENSCLAG00000009724
Degu	MODERN SPECIES	51	ENSODEG00000015179	ENSODEG00000015684	NOC3L (ENSODEG00000015822)	PLCE1 (ENSODEG00000016086)	ENSODEG00000015694	SLC35G1 (ENSODEG00000016132)	ENSODEG00000015909	LGI1 (ENSODEG00000015911)	ENSODEG00000014890	FRA10AC1 (ENSODEG00000016002)	PDE6C (ENSODEG00000015159)	RBP4 (ENSODEG00000015640)	FFAR4 (ENSODEG00000016129)	CEP55 (ENSODEG00000015163)	ENSODEG00000015511	DNAH5 (ENSODEG00000015643) #22
Guinea pig	MODERN SPECIES	55					CDH18 (ENSCPOG00000015587) #8	BASP1 (ENSCPOG00000040611) #10	MYO10 (ENSCPOG00000004645) #12	RETREG1 (ENSCPOG00000002278) #13	ZNF622 (ENSCPOG00000002276) #14	MARCHF11 (ENSCPOG00000026502) #15	FBXL7 (ENSCPOG00000013129) #16	ANKH (ENSCPOG00000012339) #17	OTULIN (ENSCPOG00000012126) #18	OTULINL (ENSCPOG00000008574) #19	TRIO (ENSCPOG00000009097) #20	DNAH5 (ENSCPOG00000015078) #22	CTNND2 (ENSCPOG00000023221) #23	ENSCPOG00000040408 #24	ROPN1L (ENSCPOG00000032598) #27	MARCHF6 (ENSCPOG00000000213) #28	CMBL (ENSCPOG00000002024) #29	CCT5 (ENSCPOG00000002023) #30	ATPSCKMT (ENSCPOG00000002022) #31	ENSCPOG00000039180 #32	ENSCPOG00000038189 #32	ENSCPOG00000005307 #32	ENSCPOG00000009427 #32	ENSCPOG00000004094	SEMA5A (ENSCPOG00000006362) #33	MTRR (ENSCPOG00000006609)	FASTKD3 (ENSCPOG00000006606)
Naked mole-rat female	MODERN SPECIES	7	ENSHGLG00000040982	ENSHGLG00000041373 #10	MYO10 (ENSHGLG00000006481) #12	RETREG1 (ENSHGLG00000033002) #13	ZNF622 (ENSHGLG00000040123) #14	ENSHGLG00000042572	ENSHGLG00000047002 #15	ENSHGLG00000005413	FBXL7 (ENSHGLG00000039624) #16	ENSHGLG00000049744	ANKH (ENSHGLG00000009005) #17	OTULIN (ENSHGLG00000008326) #18	ENSHGLG00000040674	OTULINL (ENSHGLG00000007364) #19	ENSHGLG00000004346 #20	ENSHGLG00000004104 #22	ENSHGLG00000034661	ENSHGLG00000017230	ENSHGLG00000034637	ENSHGLG00000032946	ENSHGLG00000007547 #23	ENSHGLG00000015867	ANKRD33B (ENSHGLG00000036584) #26	ENSHGLG00000004654 #27	MARCHF6 (ENSHGLG00000003823) #28	CMBL (ENSHGLG00000044949) #29	CCT5 (ENSHGLG00000015664) #30	ATPSCKMT (ENSHGLG00000033623) #31	ENSHGLG00000036712	ENSHGLG00000039033	ENSHGLG00000039099 #32
Sciuridae	ANCESTRAL SPECIES	32	ENSGT00940000154673.a	ENSGT00940000160496.b	ENSGT00940000154187.a.a ##7	ENSGT00940000154187.a.b #7	ENSGT00940000157512 #8	ENSGT00730000111450 #10	ENSGT00940000155469 #12	ENSGT00940000160746 #13	ENSGT00390000018047 #14	ENSGT00940000160025 #15	ENSGT00940000158009 #16	ENSGT00390000012189 #17	ENSGT00390000009802.b #18	ENSGT00390000009802.a #19	ENSGT00940000154766.a.a #20	ENSGT00940000155533.d #22	ENSGT00940000154952.a.b #23	ENSGT00940000154574.c #24	ENSGT00500000044852.a #26	ENSGT00390000012731.a.a #27	ENSGT00940000155171.a.b #28	ENSGT00390000000183 #29	ENSGT00550000074988 #30	ENSGT00390000014771.a #31	ENSGT01100000263477.E #32	ENSGT00940000158036 #33	ENSGT00940000155822	ENSGT01030000234607.A.a.a.a	ENSGT00390000015121	ENSGT00940000156424	ENSGT00940000157811
Marmotini	ANCESTRAL SPECIES	75										ENSGT00940000160025 #15	ENSGT00940000158009 #16	ENSGT00390000012189 #17	ENSGT00390000009802.b #18	ENSGT00390000009802.a #19	ENSGT00940000154766.a.a #20	ENSGT00940000155533.d #22	ENSGT00940000154952.a.b #23	ENSGT00940000154574.c #24	ENSGT00500000044852.a #26	ENSGT00390000012731.a.a #27	ENSGT00940000155171.a.b #28	ENSGT00390000000183 #29	ENSGT00550000074988 #30	ENSGT00390000014771.a #31	ENSGT01100000263477.E #32	ENSGT00940000158036 #33	ENSGT00940000155822	ENSGT01030000234607.A.a.a.a	ENSGT00390000015121	ENSGT00940000156424	ENSGT00940000157811
Marmotini_b	ANCESTRAL SPECIES	157										ENSGT00940000160025 #15	ENSGT00940000158009 #16	ENSGT00390000012189 #17	ENSGT00390000009802.b #18	ENSGT00390000009802.a #19	ENSGT00940000154766.a.a #20	ENSGT00940000155533.d #22	ENSGT00940000154952.a.b #23	ENSGT00940000154574.c #24	ENSGT00500000044852.a #26	ENSGT00390000012731.a.a #27	ENSGT00940000155171.a.b #28	ENSGT00390000000183 #29	ENSGT00550000074988 #30	ENSGT00390000014771.a #31	ENSGT01100000263477.E #32	ENSGT00940000158036 #33	ENSGT00940000155822	ENSGT01030000234607.A.a.a.a	ENSGT00390000015121	ENSGT00940000156424	ENSGT00940000157811
Arctic ground squirrel	MODERN SPECIES	101									MARCHF11 (ENSUPAG00010018880) #15	FBXL7 (ENSUPAG00010018865) #16	ENSUPAG00010018857	ANKH (ENSUPAG00010018838) #17	OTULIN (ENSUPAG00010018826) #18	OTULINL (ENSUPAG00010018805) #19	TRIO (ENSUPAG00010018613) #20	DNAH5 (ENSUPAG00010018491) #22	CTNND2 (ENSUPAG00010018407) #23
Squirrel	MODERN SPECIES	265										MARCHF11 (ENSSTOG00000015947) #15	FBXL7 (ENSSTOG00000026709) #16	ANKH (ENSSTOG00000014630) #17	OTULIN (ENSSTOG00000014627) #18	OTULINL (ENSSTOG00000012967) #19	TRIO (ENSSTOG00000012982) #20	DNAH5 (ENSSTOG00000012887) #22
Alpin marmot	MODERN SPECIES	27	MROH2B (ENSMMMG00000017369)	C6 (ENSMMMG00000017358)	PLCXD3 (ENSMMMG00000017352)	ENSMMMG00000017300	RIMOC1 (ENSMMMG00000017296)	FBXO4 (ENSMMMG00000017291)	GHR (ENSMMMG00000017240)	CCDC152 (ENSMMMG00000017224)	ENSMMMG00000017221	FBXL7 (ENSMMMG00000017213) #16	ANKH (ENSMMMG00000017192) #17	OTULIN (ENSMMMG00000017186) #18	OTULINL (ENSMMMG00000017171) #19	ENSMMMG00000017138 #20	ENSMMMG00000017112 #20	DNAH5 (ENSMMMG00000017061) #22	ENSMMMG00000017037	ENSMMMG00000017027	CTNND2 (ENSMMMG00000016961) #23	DAP (ENSMMMG00000016933) #24	ANKRD33B (ENSMMMG00000016918) #26	ROPN1L (ENSMMMG00000016907) #27	MARCHF6 (ENSMMMG00000016892) #28	CMBL (ENSMMMG00000016882) #29	CCT5 (ENSMMMG00000016876) #30	ATPSCKMT (ENSMMMG00000016857) #31	TAS2R1 (ENSMMMG00000016854) #32	SEMA5A (ENSMMMG00000016842) #33	ENSMMMG00000016828	MTRR (ENSMMMG00000016810)	FASTKD3 (ENSMMMG00000016807)
Eurasian red squirrel	MODERN SPECIES	15	ENSSVLG00005004196	ENSSVLG00005004221	CDH18 (ENSSVLG00005004254) #8	ENSSVLG00005004307	ENSSVLG00005004321 #10	MYO10 (ENSSVLG00005004378) #12	RETREG1 (ENSSVLG00005004440) #13	ZNF622 (ENSSVLG00005004487) #14	MARCHF11 (ENSSVLG00005004512) #15	FBXL7 (ENSSVLG00005004530) #16	ANKH (ENSSVLG00005004559) #17	OTULIN (ENSSVLG00005004587) #18	OTULINL (ENSSVLG00005004612) #19	ENSSVLG00005004640 #20	ENSSVLG00005004695 #20	DNAH5 (ENSSVLG00005004822) #22	CTNND2 (ENSSVLG00005005089) #23	DAP (ENSSVLG00005005317) #24	ANKRD33B (ENSSVLG00005005329) #26	ROPN1L (ENSSVLG00005005364) #27	ENSSVLG00005005490 ##28	ENSSVLG00005005507	CMBL (ENSSVLG00005005537) #29	ENSSVLG00005005577 #30	ATPSCKMT (ENSSVLG00005005707) #31	ENSSVLG00005005790	TAS2R1 (ENSSVLG00005005821) #32	SEMA5A (ENSSVLG00005005842) #33	MTRR (ENSSVLG00005005871)	FASTKD3 (ENSSVLG00005005935)	CFAP90 (ENSSVLG00005005976)
Lagomorpha	ANCESTRAL SPECIES	125	ENSGT00940000154673.a	ENSGT00940000160496.b	ENSGT00940000154187.a.a ##7	ENSGT00940000154187.a.b #7	ENSGT00940000157512 #8	ENSGT00730000111450 #10	ENSGT00940000155469 #12	ENSGT00940000160746 #13	ENSGT00390000018047 #14	ENSGT00940000160025 #15	ENSGT00940000158009 #16	ENSGT00390000012189 #17	ENSGT00390000009802.b #18	ENSGT00390000009802.a #19	ENSGT00940000154766.a.a #20	ENSGT00940000155533.d #22	ENSGT00940000154952.a.b #23	ENSGT01050000246290	ENSGT00500000044852.a #26	ENSGT00390000012731.a.a #27	ENSGT00940000155171.a.b #28	ENSGT00390000000183 #29	ENSGT00550000074988 #30	ENSGT00390000014771.a #31
Rabbit	MODERN SPECIES	2	ENSOCUG00000024067	BASP1 (ENSOCUG00000039590) #10	MYO10 (ENSOCUG00000017519) #12	RETREG1 (ENSOCUG00000017516) #13	ZNF622 (ENSOCUG00000017508) #14	MARCHF11 (ENSOCUG00000004408) #15	ENSOCUG00000035790	FBXL7 (ENSOCUG00000004406) #16	ENSOCUG00000025979	ENSOCUG00000022356	ANKH (ENSOCUG00000012051) #17	OTULIN (ENSOCUG00000012048) #18	OTULINL (ENSOCUG00000017585) #19	ENSOCUG00000029747	TRIO (ENSOCUG00000012986) #20	DNAH5 (ENSOCUG00000010205) #22	ENSOCUG00000027984	ENSOCUG00000036713	ENSOCUG00000035464	CTNND2 (ENSOCUG00000012709) #23	ENSOCUG00000010666	ANKRD33B (ENSOCUG00000002595) #26	ROPN1L (ENSOCUG00000005753) #27	MARCHF6 (ENSOCUG00000005741) #28	CMBL (ENSOCUG00000006084) #29	CCT5 (ENSOCUG00000021231) #30	ATPSCKMT (ENSOCUG00000025588) #31	RACK1 (ENSOCUG00000023680)	ENSOCUG00000003237	TRIM7 (ENSOCUG00000003233)	ENSOCUG00000027926
Pika	MODERN SPECIES	557																DNAH5 (ENSOPRG00000004192) #22
Tree shrew	MODERN SPECIES	5363												ANKH (ENSTBEG00000000792) #17	OTULIN (ENSTBEG00000009314) #18	ENSTBEG00000009023	TRIO (ENSTBEG00000005852) #20	DNAH5 (ENSTBEG00000000652) #22
Primates	ANCESTRAL SPECIES	8	ENSGT00940000160496.b	ENSGT00940000154187.a.a ##7	ENSGT00940000154187.a.b #7	ENSGT00940000157512 #8	ENSGT00730000111450 #10	ENSGT00940000155469 #12	ENSGT00940000160746 #13	ENSGT00390000018047 #14	ENSGT00940000160025 #15	ENSGT00940000158009 #16	ENSGT00390000012189 #17	ENSGT00390000009802.b #18	ENSGT00390000009802.a #19	ENSGT00940000166969.b	ENSGT00940000154766.a.a #20	ENSGT00940000155533.d #22	ENSGT00940000154952.a.b #23	ENSGT00940000154574.c #24	ENSGT00500000044852.a #26	ENSGT00390000012731.a.a #27	ENSGT00940000155171.a.b #28	ENSGT00390000000183 #29	ENSGT00550000074988 #30	ENSGT00390000014771.a #31	ENSGT01100000263477.E #32	ENSGT00940000158036 #33	ENSGT00940000155822	ENSGT01030000234607.A.a.a.a	ENSGT00390000015121	ENSGT00910000148650	ENSGT00940000156424
Haplorrhini	ANCESTRAL SPECIES	4	ENSGT00940000154187.a.a ##7	ENSGT00940000154187.a.b #7	ENSGT00940000157512 #8	ENSGT00390000013228.e.b	ENSGT00730000111450 #10	ENSGT00940000155469 #12	ENSGT00940000160746 #13	ENSGT00390000018047 #14	ENSGT00940000160025 #15	ENSGT00940000158009 #16	ENSGT00390000012189 #17	ENSGT00390000009802.b #18	ENSGT00390000009802.a #19	ENSGT00940000166969.b	ENSGT00940000154766.a.a #20	ENSGT00940000155533.d #22	ENSGT00940000154952.a.b #23	ENSGT00940000154574.c #24	ENSGT00500000044852.a #26	ENSGT00390000012731.a.a #27	ENSGT00940000155171.a.b #28	ENSGT00390000000183 #29	ENSGT00550000074988 #30	ENSGT00390000014771.a #31	ENSGT01100000263477.E #32	ENSGT00940000158036 #33	ENSGT00940000155822	ENSGT01030000234607.A.a.a.a	ENSGT00390000015121	ENSGT00910000148650	ENSGT00940000156424
Simiiformes	ANCESTRAL SPECIES	6	ENSGT00940000154187.a.a ##7	ENSGT00940000154187.a.b #7	ENSGT00940000157512 #8	ENSGT00390000013228.e.b	ENSGT00730000111450 #10	ENSGT00940000155469 #12	ENSGT00940000160746 #13	ENSGT00390000018047 #14	ENSGT00940000160025 #15	ENSGT00940000158009 #16	ENSGT00390000012189 #17	ENSGT00390000009802.b #18	ENSGT00390000009802.a #19	ENSGT00940000154766.a.a #20	ENSGT00910000148358	ENSGT00940000155533.d #22	ENSGT00940000154952.a.b #23	ENSGT00940000154574.c #24	ENSGT00500000044852.a #26	ENSGT00390000012731.a.a #27	ENSGT00940000155171.a.b #28	ENSGT00390000000183 #29	ENSGT00550000074988 #30	ENSGT00390000014771.a #31	ENSGT01100000263477.E #32	ENSGT00940000158036 #33	ENSGT00940000155822	ENSGT01030000234607.A.a.a.a	ENSGT00390000015121	ENSGT00910000148650	ENSGT00940000156424
Catarrhini	ANCESTRAL SPECIES	7	ENSGT00940000157512 #8	ENSGT01100000263504.b	ENSGT00390000013228.e.b	ENSGT00730000111450 #10	ENSGT00940000155469 #12	ENSGT00940000160746 #13	ENSGT00390000018047 #14	ENSGT00940000160025 #15	ENSGT00940000158009 #16	ENSGT00390000012189 #17	ENSGT00860000135740	ENSGT00390000009802.b #18	ENSGT00390000009802.a #19	ENSGT00940000154766.a.a #20	ENSGT00910000148358	ENSGT00940000155533.d #22	ENSGT00940000154952.a.b #23	ENSGT00940000154574.c #24	ENSGT00500000044852.a #26	ENSGT00390000012138.a.a.j.b	ENSGT00390000012731.a.a #27	ENSGT00940000155171.a.b #28	ENSGT00390000000183 #29	ENSGT00550000074988.u.b #30	ENSGT00390000014771.a #31	ENSGT01100000263477.E #32	ENSGT00940000158036 #33	ENSGT00940000155822	ENSGT01030000234607.A.a.a.a	ENSGT00390000015121	ENSGT00910000148650
Hominoidea	ANCESTRAL SPECIES	8	ENSGT01100000263504.b	ENSGT00390000013228.e.b.i.a	ENSGT00390000013228.e.b.j	ENSGT00730000111450 #10	ENSGT00940000155469 #12	ENSGT00940000160746 #13	ENSGT00390000018047 #14	ENSGT00940000160025 #15	ENSGT00940000158009 #16	ENSGT00390000012189 #17	ENSGT00860000135740	ENSGT00390000009802.b #18	ENSGT00390000009802.a #19	ENSGT00940000154766.a.a #20	ENSGT00910000148085	ENSGT00940000155533.d #22	ENSGT00940000154952.a.b #23	ENSGT00940000154574.c #24	ENSGT00500000044852.a #26	ENSGT00390000012138.a.a.j.b	ENSGT00390000012731.a.a #27	ENSGT00940000155171.a.b #28	ENSGT00390000000183 #29	ENSGT00550000074988.u.b #30	ENSGT00390000014771.a #31	ENSGT01100000263477.E #32	ENSGT00940000158036 #33	ENSGT00940000155822	ENSGT01030000234607.A.a.a.a	ENSGT00390000015121	ENSGT00940000156424
Hominidae	ANCESTRAL SPECIES	7	ENSGT00390000013228.e.b.i.b	ENSGT01100000263504.b.p	ENSGT00390000013228.e.b.j	ENSGT00730000111450 #10	ENSGT00940000155469 #12	ENSGT00940000160746 #13	ENSGT00390000018047 #14	ENSGT00940000160025 #15	ENSGT00940000158009 #16	ENSGT00390000012189 #17	ENSGT00860000135740	ENSGT00390000009802.b #18	ENSGT00390000009802.a #19	ENSGT00940000154766.a.a #20	ENSGT00910000148085	ENSGT00940000155533.d #22	ENSGT00940000154952.a.b #23	ENSGT00940000154574.c #24	ENSGT00500000044852.a #26	ENSGT00390000012138.a.a.j.b	ENSGT00390000012731.a.a #27	ENSGT00940000155171.a.b #28	ENSGT00390000000183 #29	ENSGT00550000074988.u.b #30	ENSGT00390000014771.a #31	ENSGT01100000263477.E #32	ENSGT00940000158036 #33	ENSGT00940000155822	ENSGT01030000234607.A.a.a.a	ENSGT00390000015121	ENSGT00940000156424
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	7	ENSGT01100000263504.b.o	ENSGT00390000013228.e.b.i.a.a.a	ENSGT00950000182841.b.a.a.b.a.a.b.b.a.b.d.a.b.b	ENSGT00730000111450 #10	ENSGT00940000155469 #12	ENSGT00940000160746 #13	ENSGT00390000018047 #14	ENSGT00940000160025 #15	ENSGT00940000158009 #16	ENSGT00390000012189 #17	ENSGT00860000135740	ENSGT00390000009802.b #18	ENSGT00390000009802.a #19	ENSGT00940000154766.a.a #20	ENSGT00910000148085	ENSGT00940000155533.d #22	ENSGT00940000154952.a.b #23	ENSGT00940000154574.c #24	ENSGT00500000044852.a #26	ENSGT00390000012138.a.a.j.b	ENSGT00390000012731.a.a #27	ENSGT00940000155171.a.b #28	ENSGT00390000000183 #29	ENSGT00550000074988.u.b #30	ENSGT00390000014771.a #31	ENSGT01100000263477.E #32	ENSGT00940000158036 #33	ENSGT00940000155822	ENSGT01030000234607.A.a.a.a	ENSGT00390000015121	ENSGT00940000156424
Homo/Pan group	ANCESTRAL SPECIES	8	ENSGT00940000157512 #8	ENSGT01100000263504.b.o	ENSGT00390000013228.e.b.i.a.a.a	ENSGT00950000182841.b.a.a.b.a.a.b.b.a.b.d.a.b.b	ENSGT00730000111450 #10	ENSGT00940000155469 #12	ENSGT00940000160746 #13	ENSGT00390000018047 #14	ENSGT00940000160025 #15	ENSGT00940000158009 #16	ENSGT00390000012189 #17	ENSGT00390000009802.b #18	ENSGT00390000009802.a #19	ENSGT00940000154766.a.a #20	ENSGT00910000148085	ENSGT00940000155533.d #22	ENSGT00940000154952.a.b.o #23	ENSGT00940000154574.c #24	ENSGT00500000044852.a #26	ENSGT00390000012138.a.a.j.b	ENSGT00390000012731.a.a #27	ENSGT00940000155171.a.b #28	ENSGT00390000000183 #29	ENSGT00550000074988.u.b #30	ENSGT00390000014771.a #31	ENSGT01100000263477.E #32	ENSGT00940000158036 #33	ENSGT00940000155822	ENSGT01030000234607.A.a.a.a	ENSGT00390000015121	ENSGT00940000156424
Pan	ANCESTRAL SPECIES	21	ENSGT00730000111450 #10	ENSGT00940000155469 #12	ENSGT00940000160746 #13	ENSGT00390000018047 #14	ENSGT00940000160025 #15	ENSGT00940000158009 #16	ENSGT00940000153375.kb.b	ENSGT00910000147847	ENSGT00860000135740	ENSGT00390000012189 #17	ENSGT00390000009802.b #18	ENSGT00950000183029.B.c.b.b.b	ENSGT00390000009802.a #19	ENSGT00940000154766.a.a #20	ENSGT00910000148085	ENSGT00940000155533.d #22	ENSGT00390000007084.c.a.d.c.a.b.b	ENSGT00940000154952.a.b.p #23	ENSGT00910000148267	ENSGT00940000154952.a.b.o #23	ENSGT00940000154574.c #24	ENSGT00500000044852.a #26	ENSGT00390000012138.a.a.j.b	ENSGT00390000012731.a.a #27	ENSGT00940000155171.a.b #28	ENSGT00390000000183 #29	ENSGT00550000074988.u.b #30	ENSGT00390000014771.a #31	ENSGT01100000263477.E #32	ENSGT00940000158036 #33	ENSGT00940000155822
Chimpanzee	MODERN SPECIES	18	BASP1 (ENSPTRG00000044904) #10	MYO10 (ENSPTRG00000016745) #12	RETREG1 (ENSPTRG00000016744) #13	ZNF622 (ENSPTRG00000016743) #14	MARCHF11 (ENSPTRG00000016742) #15	FBXL7 (ENSPTRG00000016741) #16	ENSPTRG00000052184	ENSPTRG00000043268	ANKH (ENSPTRG00000016739) #17	OTULIN (ENSPTRG00000016738) #18	ENSPTRG00000051935	ENSPTRG00000045231	OTULINL (ENSPTRG00000045722) #19	ENSPTRG00000043022	TRIO (ENSPTRG00000016735) #20	DNAH5 (ENSPTRG00000016734) #22	ENSPTRG00000044329	CTNND2 (ENSPTRG00000016731) #23	ENSPTRG00000040212 #24	ANKRD33B (ENSPTRG00000016729) #26	ROPN1L (ENSPTRG00000016728) #27	MARCHF6 (ENSPTRG00000016727) #28	CMBL (ENSPTRG00000045109) #29	CCT5 (ENSPTRG00000016725) #30	ATPSCKMT (ENSPTRG00000016724) #31	TAS2R1 (ENSPTRG00000016723) #32	SEMA5A (ENSPTRG00000016722) #33	MTRR (ENSPTRG00000016721)	FASTKD3 (ENSPTRG00000016720)	CFAP90 (ENSPTRG00000034032)	ADCY2 (ENSPTRG00000049665)
Bonobo	MODERN SPECIES	18	ENSPPAG00000035828 #13	ZNF622 (ENSPPAG00000028322) #14	ENSPPAG00000016393 #15	FBXL7 (ENSPPAG00000020751) #16	ENSPPAG00000016923	ENSPPAG00000040662	ENSPPAG00000015929	ENSPPAG00000021833	ANKH (ENSPPAG00000029143) #17	OTULIN (ENSPPAG00000031497) #18	ENSPPAG00000031191	ENSPPAG00000033437	OTULINL (ENSPPAG00000012785) #19	ENSPPAG00000041606	TRIO (ENSPPAG00000042679) #20	DNAH5 (ENSPPAG00000038258) #22	ENSPPAG00000025352	ENSPPAG00000036981 #23	ENSPPAG00000033743	ENSPPAG00000033895 #23	ENSPPAG00000042372	ENSPPAG00000014499 #26	ENSPPAG00000037114	ROPN1L (ENSPPAG00000027569) #27	MARCHF6 (ENSPPAG00000036651) #28	CMBL (ENSPPAG00000033069) #29	CCT5 (ENSPPAG00000029058) #30	ATPSCKMT (ENSPPAG00000042235) #31	TAS2R1 (ENSPPAG00000010439) #32	SEMA5A (ENSPPAG00000043389) #33	MTRR (ENSPPAG00000043987)
Human	MODERN SPECIES	17	TAF11L4 (ENSG00000284283)	TAF11L3 (ENSG00000284439)	TAF11L2 (ENSG00000284373)	H3Y2 (ENSG00000268799)	LINC02218 (ENSG00000249662)	BASP1 (ENSG00000176788) #10	MYO10 (ENSG00000145555) #12	RETREG1 (ENSG00000154153) #13	ZNF622 (ENSG00000173545) #14	MARCHF11 (ENSG00000183654) #15	FBXL7 (ENSG00000183580) #16	ANKH (ENSG00000154122) #17	OTULIN (ENSG00000154124) #18	OTULINL (ENSG00000145569) #19	TRIO (ENSG00000038382) #20	DNAH5 (ENSG00000039139) #22	CTNND2 (ENSG00000169862) #23	DAP (ENSG00000112977) #24	ANKRD33B (ENSG00000164236) #26	ROPN1L (ENSG00000145491) #27	MARCHF6 (ENSG00000145495) #28	CMBL (ENSG00000164237) #29	CCT5 (ENSG00000150753) #30	ATPSCKMT (ENSG00000150756) #31	TAS2R1 (ENSG00000169777) #32	SEMA5A (ENSG00000112902) #33	FASTKD3 (ENSG00000124279)	MTRR (ENSG00000124275)	CFAP90 (ENSG00000215217)	ADCY2 (ENSG00000078295)	TENT4A (ENSG00000112941)
Gorilla	MODERN SPECIES	8	BASP1 (ENSGGOG00000040563) #10	MYO10 (ENSGGOG00000007641) #12	RETREG1 (ENSGGOG00000010613) #13	ZNF622 (ENSGGOG00000009831) #14	ENSGGOG00000015876 #15	FBXL7 (ENSGGOG00000011159) #16	ENSGGOG00000041512	ANKH (ENSGGOG00000015324) #17	ENSGGOG00000039201	ENSGGOG00000036947	OTULIN (ENSGGOG00000039258) #18	ENSGGOG00000041699	OTULINL (ENSGGOG00000014004) #19	TRIO (ENSGGOG00000013607) #20	ENSGGOG00000043604	DNAH5 (ENSGGOG00000007206) #22	CTNND2 (ENSGGOG00000014843) #23	ENSGGOG00000042335	ENSGGOG00000012480	ANKRD33B (ENSGGOG00000002528) #26	ENSGGOG00000038735	ROPN1L (ENSGGOG00000004935) #27	MARCHF6 (ENSGGOG00000004929) #28	CMBL (ENSGGOG00000014129) #29	CCT5 (ENSGGOG00000024064) #30	ATPSCKMT (ENSGGOG00000014109) #31	TAS2R1 (ENSGGOG00000013791) #32	SEMA5A (ENSGGOG00000011428) #33	MTRR (ENSGGOG00000000958)	FASTKD3 (ENSGGOG00000015994)	CFAP90 (ENSGGOG00000011202)
Orangutan	MODERN SPECIES	18	ENSPPYG00000031629	ENSPPYG00000037527	ENSPPYG00000038058	H3Y2 (ENSPPYG00000039218)	BASP1 (ENSPPYG00000015357) #10	MYO10 (ENSPPYG00000015356) #12	RETREG1 (ENSPPYG00000041318) #13	ZNF622 (ENSPPYG00000029803) #14	MARCHF11 (ENSPPYG00000015355) #15	ENSPPYG00000041039	FBXL7 (ENSPPYG00000015354) #16	ANKH (ENSPPYG00000015353) #17	OTULIN (ENSPPYG00000031564) #18	OTULINL (ENSPPYG00000015351) #19	TRIO (ENSPPYG00000015350) #20	DNAH5 (ENSPPYG00000015349) #22	ENSPPYG00000039629	ENSPPYG00000041438	CTNND2 (ENSPPYG00000015348) #23	ENSPPYG00000039207	ANKRD33B (ENSPPYG00000015346) #26	ENSPPYG00000037234	ENSPPYG00000015345 #27	MARCHF6 (ENSPPYG00000015344) #28	CMBL (ENSPPYG00000015343) #29	CCT5 (ENSPPYG00000015342) #30	ATPSCKMT (ENSPPYG00000015341) #31	TAS2R1 (ENSPPYG00000015340) #32	SEMA5A (ENSPPYG00000015339) #33	MTRR (ENSPPYG00000015338)	FASTKD3 (ENSPPYG00000015337)
Gibbon	MODERN SPECIES	21	ENSNLEG00000011893	ZNF622 (ENSNLEG00000011876) #14	MARCHF11 (ENSNLEG00000032192) #15	FBXL7 (ENSNLEG00000011867) #16	ENSNLEG00000035266	ENSNLEG00000031835	ENSNLEG00000030862	ENSNLEG00000035747	ANKH (ENSNLEG00000011853) #17	OTULIN (ENSNLEG00000011846) #18	ENSNLEG00000036186	ENSNLEG00000018902	OTULINL (ENSNLEG00000011842) #19	ENSNLEG00000033622	TRIO (ENSNLEG00000011777) #20	DNAH5 (ENSNLEG00000030158) #22	CTNND2 (ENSNLEG00000011705) #23	DAP (ENSNLEG00000011695) #24	ANKRD33B (ENSNLEG00000011694) #26	ENSNLEG00000032298	ROPN1L (ENSNLEG00000011687) #27	MARCHF6 (ENSNLEG00000011608) #28	CMBL (ENSNLEG00000011601) #29	CCT5 (ENSNLEG00000032559) #30	ATPSCKMT (ENSNLEG00000027427) #31	SEMA5A (ENSNLEG00000011566) #33	MTRR (ENSNLEG00000011522)	FASTKD3 (ENSNLEG00000011510)	CFAP90 (ENSNLEG00000011506)	ADCY2 (ENSNLEG00000011468)	TENT4A (ENSNLEG00000011434)
Cercopithecidae	ANCESTRAL SPECIES	5	ENSGT01100000263504.b	ENSGT00390000013228.e.b	ENSGT00730000111450 #10	ENSGT00940000155469 #12	ENSGT00940000160746 #13	ENSGT00390000018047 #14	ENSGT00940000160025 #15	ENSGT00940000158009 #16	ENSGT00390000012189 #17	ENSGT00860000135740	ENSGT00390000009802.b #18	ENSGT00940000154631.mb	ENSGT00390000009802.a #19	ENSGT00940000154766.a.a #20	ENSGT00910000148358	ENSGT00940000155533.d #22	ENSGT00940000154952.a.b #23	ENSGT00940000164737	ENSGT00940000154574.c #24	ENSGT00500000044852.a #26	ENSGT00390000012138.a.a.j.b	ENSGT00390000012731.a.a #27	ENSGT00940000155171.a.b #28	ENSGT00390000000183 #29	ENSGT00550000074988.u.b #30	ENSGT00390000014771.a #31	ENSGT01100000263477.E #32	ENSGT00940000158036 #33	ENSGT00940000155822	ENSGT01030000234607.A.a.a.a	ENSGT00390000015121
Cercopithecinae	ANCESTRAL SPECIES	9	ENSGT01100000263504.b.r.a	ENSGT00390000013228.e.b	ENSGT00730000111450 #10	ENSGT00940000155469 #12	ENSGT00940000160746 #13	ENSGT00390000018047 #14	ENSGT00940000160025 #15	ENSGT00940000158009 #16	ENSGT00390000012189 #17	ENSGT00860000135740	ENSGT00390000009802.b #18	ENSGT00940000154631.mb	ENSGT00390000009802.a #19	ENSGT00940000154766.a.a #20	ENSGT00910000148358	ENSGT00940000155533.d #22	ENSGT00940000154952.a.b #23	ENSGT00940000164737	ENSGT00940000154574.c #24	ENSGT00500000044852.a #26	ENSGT00390000012731.a.a #27	ENSGT00940000155171.a.b #28	ENSGT00390000000183 #29	ENSGT00550000074988.u.b #30	ENSGT00390000014771.a #31	ENSGT01100000263477.E #32	ENSGT00940000158036 #33	ENSGT00940000155822	ENSGT01030000234607.A.a.a.a	ENSGT00390000015121	ENSGT00910000148650
Cercopithecinae_a	ANCESTRAL SPECIES	9	ENSGT01100000263504.b.r.b	ENSGT00910000147515	ENSGT00730000111450 #10	ENSGT00940000155469 #12	ENSGT00940000160746 #13	ENSGT00390000018047 #14	ENSGT00940000160025 #15	ENSGT00940000158009 #16	ENSGT00390000012189 #17	ENSGT00860000135740	ENSGT00390000009802.b #18	ENSGT00940000154631.mb	ENSGT00390000009802.a #19	ENSGT00940000154766.a.a #20	ENSGT00910000148358	ENSGT00940000155533.d #22	ENSGT00940000154952.a.b #23	ENSGT00940000164737	ENSGT00940000154574.c #24	ENSGT00500000044852.a #26	ENSGT00390000012731.a.a #27	ENSGT00940000155171.a.b #28	ENSGT00390000000183 #29	ENSGT00550000074988.u.b #30	ENSGT00390000014771.a #31	ENSGT01100000263477.E #32	ENSGT00940000158036 #33	ENSGT00940000155822	ENSGT01030000234607.A.a.a.a	ENSGT00390000015121	ENSGT00910000148650
Macaca	ANCESTRAL SPECIES	7	ENSGT00910000147515	ENSGT00730000111450 #10	ENSGT00940000155469 #12	ENSGT00940000160746 #13	ENSGT00390000018047 #14	ENSGT00940000160025 #15	ENSGT00940000158009 #16	ENSGT00390000000950.c.a	ENSGT00390000012189 #17	ENSGT00860000135740	ENSGT00390000009802.b #18	ENSGT00940000154631.mb	ENSGT00390000009802.a #19	ENSGT00940000154766.a.a #20	ENSGT00910000148358	ENSGT00940000155533.d #22	ENSGT00940000154952.a.b #23	ENSGT00940000164737	ENSGT00940000154574.c #24	ENSGT00500000044852.a #26	ENSGT00390000012731.a.a #27	ENSGT00940000155171.a.b #28	ENSGT00390000000183 #29	ENSGT00550000074988.u.b #30	ENSGT00390000014771.a #31	ENSGT01100000263477.E #32	ENSGT00940000158036 #33	ENSGT00940000155822	ENSGT01030000234607.A.a.a.a	ENSGT00390000015121	ENSGT00910000148650
Pig-tailed macaque	MODERN SPECIES	189	ENSMNEG00000013688	BASP1 (ENSMNEG00000023203) #10	MYO10 (ENSMNEG00000043997) #12	RETREG1 (ENSMNEG00000041528) #13	ZNF622 (ENSMNEG00000036952) #14	MARCHF11 (ENSMNEG00000014598) #15	FBXL7 (ENSMNEG00000015203) #16	ENSMNEG00000032726	ANKH (ENSMNEG00000033750) #17	ENSMNEG00000039192	OTULIN (ENSMNEG00000028710) #18	ENSMNEG00000033826	OTULINL (ENSMNEG00000035378) #19	TRIO (ENSMNEG00000035913) #20	ENSMNEG00000041446	DNAH5 (ENSMNEG00000033291) #22
Macaca_a	ANCESTRAL SPECIES	8	ENSGT00390000013228.e.b.h	ENSGT00390000013228.e.b.g.a.b.a	ENSGT00730000111450 #10	ENSGT01090000260213.a.a.a.a.a.a	ENSGT00940000155469 #12	ENSGT00940000160746 #13	ENSGT00390000018047 #14	ENSGT00940000160025 #15	ENSGT00940000158009 #16	ENSGT00390000012189 #17	ENSGT00390000009802.b #18	ENSGT00390000009802.a #19	ENSGT00940000166969.b	ENSGT00940000154766.a.a #20	ENSGT01080000257579.b.a.a	ENSGT00940000155533.d #22	ENSGT00940000154952.a.b #23	ENSGT00940000164737	ENSGT00500000044852.a #26	ENSGT00390000012731.a.a #27	ENSGT00940000155171.a.b #28	ENSGT00390000000183 #29	ENSGT00550000074988.u.b #30	ENSGT00390000014771.a #31	ENSGT01100000263477.E #32	ENSGT00940000158036 #33	ENSGT00940000155822	ENSGT01030000234607.A.a.a.a	ENSGT00390000015121	ENSGT00910000148650	ENSGT00940000156424
Crab-eating macaque	MODERN SPECIES	16	ENSMFAG00000058675	ENSMFAG00000044958 #12	RETREG1 (ENSMFAG00000015961) #13	ZNF622 (ENSMFAG00000058196) #14	FBXL7 (ENSMFAG00000000432) #16	ENSMFAG00000060701	ENSMFAG00000063263	ANKH (ENSMFAG00000038859) #17	OTULIN (ENSMFAG00000037873) #18	OTULINL (ENSMFAG00000037715) #19	ENSMFAG00000064998	ENSMFAG00000054607	ENSMFAG00000062808 #20	ENSMFAG00000035974 #20	ENSMFAG00000057716	DNAH5 (ENSMFAG00000001076) #22	CTNND2 (ENSMFAG00000044186) #23	ENSMFAG00000036456	ENSMFAG00000063851	ENSMFAG00000048413	ENSMFAG00000056679	ROPN1L (ENSMFAG00000000471) #27	MARCHF6 (ENSMFAG00000002411) #28	CMBL (ENSMFAG00000001594) #29	CCT5 (ENSMFAG00000045954) #30	ATPSCKMT (ENSMFAG00000044629) #31	ENSMFAG00000053806	TAS2R1 (ENSMFAG00000041270) #32	SEMA5A (ENSMFAG00000038895) #33	MTRR (ENSMFAG00000036712)	FASTKD3 (ENSMFAG00000040312)
Rhesus	MODERN SPECIES	16	MYO10 (ENSMMUG00000012672) #12	RETREG1 (ENSMMUG00000001375) #13	ZNF622 (ENSMMUG00000055492) #14	MARCHF11 (ENSMMUG00000007069) #15	FBXL7 (ENSMMUG00000013364) #16	ENSMMUG00000059412	ANKH (ENSMMUG00000021942) #17	ENSMMUG00000060654	OTULIN (ENSMMUG00000059554) #18	OTULINL (ENSMMUG00000005665) #19	ENSMMUG00000065193	ENSMMUG00000064349	ENSMMUG00000050304	TRIO (ENSMMUG00000015489) #20	ENSMMUG00000061003	DNAH5 (ENSMMUG00000011026) #22	CTNND2 (ENSMMUG00000023419) #23	DAP (ENSMMUG00000001131)	ANKRD33B (ENSMMUG00000001130) #26	ROPN1L (ENSMMUG00000060969) #27	MARCHF6 (ENSMMUG00000009758) #28	CMBL (ENSMMUG00000020113) #29	CCT5 (ENSMMUG00000020112) #30	ATPSCKMT (ENSMMUG00000020111) #31	ENSMMUG00000059787	ENSMMUG00000064218	TAS2R1 (ENSMMUG00000058066) #32	SEMA5A (ENSMMUG00000020160) #33	MTRR (ENSMMUG00000018747)	FASTKD3 (ENSMMUG00000018746)	CFAP90 (ENSMMUG00000018745)
Cercopithecinae_b	ANCESTRAL SPECIES	4	ENSGT00940000154187.a.b #7	ENSGT00940000157512 #8	ENSGT00390000013228.e.b	ENSGT00730000111450 #10	ENSGT00940000155469 #12	ENSGT00940000160746 #13	ENSGT00390000018047 #14	ENSGT00940000160025 #15	ENSGT00940000158009 #16	ENSGT00390000012189 #17	ENSGT00860000135740	ENSGT00390000009802.b #18	ENSGT00940000154631.mb	ENSGT00390000009802.a #19	ENSGT00940000154766.a.a #20	ENSGT00940000155533.d #22	ENSGT00940000154952.a.b #23	ENSGT00940000164737	ENSGT00500000044852.a #26	ENSGT00390000012731.a.a #27	ENSGT00940000155171.a.b #28	ENSGT00390000000183 #29	ENSGT00550000074988.u.b #30	ENSGT00390000014771.a #31	ENSGT01100000263477.E #32	ENSGT00940000158036 #33	ENSGT00940000155822	ENSGT01030000234607.A.a.a.a	ENSGT00390000015121	ENSGT00940000156424	ENSGT00940000157811
Cercopithecinae_d	ANCESTRAL SPECIES	117		ENSGT00390000013228.e.b	ENSGT00730000111450 #10	ENSGT00940000155469 #12	ENSGT00940000160746 #13	ENSGT00390000018047 #14	ENSGT00940000160025 #15	ENSGT00940000158009 #16	ENSGT00940000166073	ENSGT00390000012189 #17	ENSGT00860000135740	ENSGT00390000009802.b #18	ENSGT00940000154631.mb	ENSGT00390000009802.a #19	ENSGT00940000154766.a.a #20	ENSGT00940000155533.d #22	ENSGT00940000154952.a.b #23	ENSGT00940000164737	ENSGT00500000044852.a #26	ENSGT00390000012731.a.a #27	ENSGT00940000155171.a.b #28	ENSGT00390000000183 #29	ENSGT00550000074988.u.b #30	ENSGT00390000014771.a #31	ENSGT00940000158036 #33	ENSGT00940000155822	ENSGT01030000234607.A.a.a.a	ENSGT00390000015121	ENSGT00940000156424	ENSGT00910000147919	ENSGT00940000157811
Drill	MODERN SPECIES	1129									FBXL7 (ENSMLEG00000036522) #16	ENSMLEG00000043587	ANKH (ENSMLEG00000038701) #17	ENSMLEG00000035542	OTULIN (ENSMLEG00000030194) #18	OTULINL (ENSMLEG00000028772) #19	TRIO (ENSMLEG00000040461) #20	DNAH5 (ENSMLEG00000028943) #22
Sooty mangabey	MODERN SPECIES	651		LINC02218 (ENSCATG00000032022)	BASP1 (ENSCATG00000017063) #10	MYO10 (ENSCATG00000017095) #12	RETREG1 (ENSCATG00000009952) #13	ZNF622 (ENSCATG00000031254) #14	MARCHF11 (ENSCATG00000040604) #15	FBXL7 (ENSCATG00000044863) #16	ENSCATG00000040500	ANKH (ENSCATG00000037767) #17	ENSCATG00000039416	OTULIN (ENSCATG00000036861) #18	ENSCATG00000038885	OTULINL (ENSCATG00000010694) #19	TRIO (ENSCATG00000041897) #20	DNAH5 (ENSCATG00000036141) #22	CTNND2 (ENSCATG00000032880) #23	ENSCATG00000012211	ANKRD33B (ENSCATG00000039092) #26	ROPN1L (ENSCATG00000020298) #27	MARCHF6 (ENSCATG00000013412) #28	CMBL (ENSCATG00000033887) #29	CCT5 (ENSCATG00000030742) #30	ATPSCKMT (ENSCATG00000040712) #31	ENSCATG00000029390	SEMA5A (ENSCATG00000042404) #33	MTRR (ENSCATG00000045027)	FASTKD3 (ENSCATG00000028957)	CFAP90 (ENSCATG00000036277)	ADCY2 (ENSCATG00000033939)	ENSCATG00000042677
Olive baboon	MODERN SPECIES	15	ENSPANG00000032323	ENSPANG00000039022	ENSPANG00000039610	MYO10 (ENSPANG00000002428) #12	RETREG1 (ENSPANG00000019521) #13	ZNF622 (ENSPANG00000009355) #14	ENSPANG00000046759	MARCHF11 (ENSPANG00000017253) #15	ENSPANG00000046248	FBXL7 (ENSPANG00000012119) #16	ANKH (ENSPANG00000014384) #17	OTULIN (ENSPANG00000016505) #18	OTULINL (ENSPANG00000014910) #19	TRIO (ENSPANG00000016240) #20	ENSPANG00000047693	DNAH5 (ENSPANG00000044963) #22	ENSPANG00000040641	ENSPANG00000007304	ENSPANG00000019790	CTNND2 (ENSPANG00000023864) #23	ENSPANG00000042254	ENSPANG00000009356	ANKRD33B (ENSPANG00000021670) #26	ROPN1L (ENSPANG00000008958) #27	MARCHF6 (ENSPANG00000001813) #28	CMBL (ENSPANG00000004379) #29	CCT5 (ENSPANG00000006999) #30	ATPSCKMT (ENSPANG00000015778) #31	TAS2R1 (ENSPANG00000047467) #32	SEMA5A (ENSPANG00000012025) #33	ENSPANG00000039496
Vervet Monkey	MODERN SPECIES	23	CDH18 (ENSCSAG00000017245) #8	ENSCSAG00000017248	ENSCSAG00000018991	ENSCSAG00000018990	ENSCSAG00000018989	BASP1 (ENSCSAG00000018988) #10	MYO10 (ENSCSAG00000017255) #12	RETREG1 (ENSCSAG00000017260) #13	ZNF622 (ENSCSAG00000017262) #14	MARCHF11 (ENSCSAG00000017263) #15	FBXL7 (ENSCSAG00000017265) #16	ANKH (ENSCSAG00000017267) #17	OTULIN (ENSCSAG00000017269) #18	OTULINL (ENSCSAG00000017275) #19	TRIO (ENSCSAG00000017284) #20	DNAH5 (ENSCSAG00000017291) #22	CTNND2 (ENSCSAG00000017304) #23	ENSCSAG00000017308	ANKRD33B (ENSCSAG00000017312) #26	ENSCSAG00000017314	ROPN1L (ENSCSAG00000017316) #27	MARCHF6 (ENSCSAG00000017319) #28	CMBL (ENSCSAG00000017321) #29	CCT5 (ENSCSAG00000017323) #30	ATPSCKMT (ENSCSAG00000017326) #31	TAS2R1 (ENSCSAG00000018987) #32	SEMA5A (ENSCSAG00000017328) #33	MTRR (ENSCSAG00000017329)	FASTKD3 (ENSCSAG00000017331)	CFAP90 (ENSCSAG00000017332)	ADCY2 (ENSCSAG00000017334)
Rhinopithecus	ANCESTRAL SPECIES	335		ENSGT00910000147515	ENSGT00730000111450 #10	ENSGT00940000155469 #12	ENSGT00940000160746 #13	ENSGT00390000018047 #14	ENSGT00940000160025 #15	ENSGT00940000158009 #16	ENSGT00910000147847	ENSGT00860000135740	ENSGT00390000012189 #17	ENSGT00390000009802.b #18	ENSGT00940000154631.mb	ENSGT00390000009802.a #19	ENSGT00940000154766.a.a #20	ENSGT00940000155533.d #22	ENSGT00390000007084.c.a.d.c.a.b
Golden snub-nosed monkey	MODERN SPECIES	1773							MARCHF11 (ENSRROG00000034909) #15	FBXL7 (ENSRROG00000017801) #16	ENSRROG00000039150	ENSRROG00000029425	ANKH (ENSRROG00000040288) #17	OTULIN (ENSRROG00000028826) #18	ENSRROG00000022524	OTULINL (ENSRROG00000029065) #19	TRIO (ENSRROG00000036518) #20	DNAH5 (ENSRROG00000034442) #22	ENSRROG00000037267
Black snub-nosed monkey	MODERN SPECIES	1127										ENSRBIG00000043466	ANKH (ENSRBIG00000032846) #17	OTULIN (ENSRBIG00000015071) #18	ENSRBIG00000034460	OTULINL (ENSRBIG00000039322) #19	TRIO (ENSRBIG00000038517) #20	DNAH5 (ENSRBIG00000041383) #22	ENSRBIG00000031518
Platyrrhini	ANCESTRAL SPECIES	7	ENSGT00940000154673.a	ENSGT00940000160496.b	ENSGT00940000154187.a.a ##7	ENSGT00940000154187.a.b #7	ENSGT00940000157512 #8	ENSGT00940000155469 #12	ENSGT00940000160746 #13	ENSGT00390000018047.a #14	ENSGT00940000160025 #15	ENSGT00940000158009 #16	ENSGT00390000012189 #17	ENSGT00390000009802.b #18	ENSGT00390000009802.a #19	ENSGT00940000154766.a.a #20	ENSGT00910000148358	ENSGT00940000155533.d #22	ENSGT00940000154952.a.b #23	ENSGT00940000164737	ENSGT00500000044852.a #26	ENSGT00390000012731.a.a #27	ENSGT00940000155171.a.b #28	ENSGT00390000000183.l #29	ENSGT00550000074988 #30	ENSGT00390000014771.a #31	ENSGT01100000263477.E #32	ENSGT00940000158036 #33	ENSGT00940000155822	ENSGT01030000234607.A.a.a.a	ENSGT00390000015121	ENSGT00940000156424	ENSGT00940000157811
Cebidae	ANCESTRAL SPECIES	6	ENSGT00940000154673.a	ENSGT00940000160496.b	ENSGT00940000154187.a.a ##7	ENSGT00940000154187.a.b #7	ENSGT00940000157512 #8	ENSGT00940000155469 #12	ENSGT00940000160746 #13	ENSGT00390000018047.a #14	ENSGT00940000160025 #15	ENSGT00940000158009 #16	ENSGT00390000012189 #17	ENSGT00390000009802.b #18	ENSGT00390000009802.a #19	ENSGT00940000154766.a.a #20	ENSGT00910000148358	ENSGT00940000155533.d #22	ENSGT00940000154952.a.b #23	ENSGT00940000164737	ENSGT00500000044852.a #26	ENSGT00390000012731.a.a #27	ENSGT00940000155171.a.b #28	ENSGT00390000000183.l #29	ENSGT00550000074988 #30	ENSGT00390000014771.a #31	ENSGT01100000263477.E #32	ENSGT00940000158036 #33	ENSGT00940000155822	ENSGT01030000234607.A.a.a.a	ENSGT00390000015121	ENSGT00940000156424	ENSGT00940000157811
Cebidae_a	DUPLICATION
Cebidae_a	ANCESTRAL SPECIES	82			ENSGT00940000154187.a.b #7	ENSGT00940000157512 #8	ENSGT00940000155469 #12	ENSGT00940000160746 #13	ENSGT00390000018047.a #14	ENSGT00940000160025 #15	ENSGT00940000158009 #16	ENSGT00390000012189 #17	ENSGT00390000009802.b #18	ENSGT00390000009802.a #19	ENSGT00940000154766.a.a #20	ENSGT00940000155533.d.j #22	ENSGT00910000148358	ENSGT00940000155533.d.i #22	ENSGT00940000154952.a.b #23	ENSGT00940000164737	ENSGT00500000044852.a #26	ENSGT00390000012731.a.a #27	ENSGT00940000155171.a.b #28	ENSGT00390000000183.l #29	ENSGT00550000074988 #30	ENSGT00390000014771.a #31	ENSGT00940000158036 #33	ENSGT00940000155822	ENSGT01030000234607.A.a.a.a	ENSGT00390000015121	ENSGT00940000156424	ENSGT00940000157811	ENSGT00950000182886.b.b
Bolivian squirrel monkey	MODERN SPECIES	92									MARCHF11 (ENSSBOG00000035655) #15	FBXL7 (ENSSBOG00000031131) #16	ANKH (ENSSBOG00000024577) #17	OTULIN (ENSSBOG00000026879) #18	OTULINL (ENSSBOG00000027772) #19	TRIO (ENSSBOG00000029501) #20	ENSSBOG00000011358	DNAH5 (ENSSBOG00000021905) #22	CTNND2 (ENSSBOG00000024406) #23	ENSSBOG00000025627	ENSSBOG00000026915	ENSSBOG00000032547 #26	ROPN1L (ENSSBOG00000021335) #27	MARCHF6 (ENSSBOG00000020372) #28	CMBL (ENSSBOG00000021093) #29	CCT5 (ENSSBOG00000022734) #30	ATPSCKMT (ENSSBOG00000021099) #31	SEMA5A (ENSSBOG00000032395) #33	MTRR (ENSSBOG00000028252)	FASTKD3 (ENSSBOG00000020653)	CFAP90 (ENSSBOG00000024374)	ADCY2 (ENSSBOG00000025740)	TENT4A (ENSSBOG00000035549)
Capuchin	MODERN SPECIES	360																ENSCCAG00000022764 #22
Cebidae_a	ANCESTRAL SPECIES	82					ENSGT00940000154187.a.b #7	ENSGT00940000157512 #8	ENSGT00940000155469 #12	ENSGT00940000160746 #13	ENSGT00390000018047.a #14	ENSGT00940000160025 #15	ENSGT00940000158009 #16	ENSGT00390000012189 #17	ENSGT00390000009802.b #18	ENSGT00390000009802.a #19	ENSGT00940000154766.a.a #20	ENSGT00940000155533.d.j #22	ENSGT00910000148358	ENSGT00940000155533.d.i #22	ENSGT00940000154952.a.b #23	ENSGT00940000164737	ENSGT00500000044852.a #26	ENSGT00390000012731.a.a #27	ENSGT00940000155171.a.b #28	ENSGT00390000000183.l #29	ENSGT00550000074988 #30	ENSGT00390000014771.a #31	ENSGT00940000158036 #33	ENSGT00940000155822	ENSGT01030000234607.A.a.a.a	ENSGT00390000015121	ENSGT00940000156424
Capuchin	MODERN SPECIES	35			CDH12 (ENSCCAG00000019124) #7	CDH18 (ENSCCAG00000025772) #8	MYO10 (ENSCCAG00000031156) #12	RETREG1 (ENSCCAG00000037769) #13	ZNF622 (ENSCCAG00000035492) #14	ENSCCAG00000032090	ENSCCAG00000023780	MARCHF11 (ENSCCAG00000024495) #15	FBXL7 (ENSCCAG00000027611) #16	ANKH (ENSCCAG00000011430) #17	OTULIN (ENSCCAG00000025591) #18	OTULINL (ENSCCAG00000037191) #19	TRIO (ENSCCAG00000027836) #20	ENSCCAG00000030740 #22
Marmoset	MODERN SPECIES	11	ENSCJAG00000031497	ENSCJAG00000081133	ENSCJAG00000085722	ENSCJAG00000082447	BASP1 (ENSCJAG00000046235) #10	ENSCJAG00000053651	MYO10 (ENSCJAG00000011831) #12	RETREG1 (ENSCJAG00000042515) #13	MARCHF11 (ENSCJAG00000047285) #15	FBXL7 (ENSCJAG00000010823) #16	ANKH (ENSCJAG00000010839) #17	OTULIN (ENSCJAG00000010884) #18	OTULINL (ENSCJAG00000010893) #19	TRIO (ENSCJAG00000010904) #20	ENSCJAG00000072293	DNAH5 (ENSCJAG00000009326) #22	ENSCJAG00000076372	ENSCJAG00000071150	ENSCJAG00000074642	ENSCJAG00000080282	ENSCJAG00000004019	CTNND2 (ENSCJAG00000009238) #23	ENSCJAG00000085149	ENSCJAG00000046611	ANKRD33B (ENSCJAG00000009224) #26	ENSCJAG00000083278	MARCHF6 (ENSCJAG00000009091) #28	ENSCJAG00000045979 #29	ENSCJAG00000008977 #30	ATPSCKMT (ENSCJAG00000070705) #31	TAS2R1 (ENSCJAG00000077757) #32
Mas night monkey	MODERN SPECIES	837	CDH12 (ENSANAG00000034476) #7	CDH18 (ENSANAG00000030633) #8	ENSANAG00000019238	MYO10 (ENSANAG00000036842) #12	RETREG1 (ENSANAG00000036598) #13	ENSANAG00000031551 #14	MARCHF11 (ENSANAG00000029893) #15	ENSANAG00000030785	FBXL7 (ENSANAG00000028663) #16	ANKH (ENSANAG00000019438) #17	OTULIN (ENSANAG00000003357) #18	OTULINL (ENSANAG00000035304) #19	ENSANAG00000025539	TRIO (ENSANAG00000026493) #20	ENSANAG00000019517	DNAH5 (ENSANAG00000030588) #22	CTNND2 (ENSANAG00000036393) #23	ENSANAG00000033682	ANKRD33B (ENSANAG00000027592) #26	ROPN1L (ENSANAG00000021831) #27	MARCHF6 (ENSANAG00000037794) #28	CMBL (ENSANAG00000029875) #29	CCT5 (ENSANAG00000026097) #30	ATPSCKMT (ENSANAG00000022943) #31	SEMA5A (ENSANAG00000021223) #33	MTRR (ENSANAG00000023571)	FASTKD3 (ENSANAG00000021217)	CFAP90 (ENSANAG00000032842)	ADCY2 (ENSANAG00000023768)	TENT4A (ENSANAG00000037806)	SRD5A1 (ENSANAG00000020870)
Tarsier	MODERN SPECIES	4584																DNAH5 (ENSTSYG00000009866) #22
Strepsirrhini	ANCESTRAL SPECIES	5	ENSGT00940000160496.b	ENSGT00940000154187.a.a ##7	ENSGT00940000154187.a.b #7	ENSGT00940000157512 #8	ENSGT00730000111450 #10	ENSGT00940000155469 #12	ENSGT00940000160746 #13	ENSGT00390000018047 #14	ENSGT00940000160025 #15	ENSGT00940000158009 #16	ENSGT00390000000950.c.a.n	ENSGT00390000012189 #17	ENSGT00390000009802.b #18	ENSGT00390000009802.a #19	ENSGT00940000154766.a.a #20	ENSGT00940000155533.d #22	ENSGT00940000154952.a.b #23	ENSGT00940000154574.c #24	ENSGT00500000044852.a #26	ENSGT00390000012731.a.a #27	ENSGT00940000155171.a.b #28	ENSGT00390000000183 #29	ENSGT00550000074988 #30	ENSGT00390000014771.a #31	ENSGT01100000263477.E #32	ENSGT00940000158036 #33	ENSGT00940000155822	ENSGT01030000234607.A.a.a.a	ENSGT00390000015121	ENSGT00940000156424	ENSGT00940000157811
Lemuriformes	ANCESTRAL SPECIES	47	ENSGT00940000160496.b	ENSGT00940000154187.a.a ##7	ENSGT00940000154187.a.b #7	ENSGT00940000157512 #8	ENSGT00730000111450 #10	ENSGT00940000155469 #12	ENSGT00940000160746 #13	ENSGT00390000018047 #14	ENSGT00940000160025 #15	ENSGT00940000158009 #16	ENSGT00390000000950.c.a.n	ENSGT00390000012189 #17	ENSGT00390000009802.b #18	ENSGT00390000009802.a #19	ENSGT00940000154766.a.a #20	ENSGT00940000155533.d #22	ENSGT00940000154952.a.b #23	ENSGT00940000154574.c #24	ENSGT00500000044852.a #26	ENSGT00390000012731.a.a #27	ENSGT00940000155171.a.b #28	ENSGT00390000000183 #29	ENSGT00550000074988 #30	ENSGT00390000014771.a #31	ENSGT01100000263477.E #32	ENSGT00940000158036 #33	ENSGT00940000155822	ENSGT01030000234607.A.a.a.a	ENSGT00390000015121	ENSGT00940000156424	ENSGT00940000157811
Mouse lemur	MODERN SPECIES	3	ZNF366 (ENSMICG00000026789)	TNPO1 (ENSMICG00000008468)	ENSMICG00000028486	ENSMICG00000035529	ENSMICG00000046999 #10	MYO10 (ENSMICG00000010556) #12	RETREG1 (ENSMICG00000010548) #13	ZNF622 (ENSMICG00000010544) #14	ENSMICG00000047304 #15	FBXL7 (ENSMICG00000010535) #16	ENSMICG00000004970	ANKH (ENSMICG00000017365) #17	OTULIN (ENSMICG00000017364) #18	ENSMICG00000017363 #19	TRIO (ENSMICG00000015477) #20	DNAH5 (ENSMICG00000015344) #22	CTNND2 (ENSMICG00000013931) #23	DAP (ENSMICG00000044020) #24	ANKRD33B (ENSMICG00000017147) #26	ROPN1L (ENSMICG00000035924) #27	MARCHF6 (ENSMICG00000010632) #28	CMBL (ENSMICG00000000533) #29	CCT5 (ENSMICG00000000530) #30	ATPSCKMT (ENSMICG00000043453) #31	ENSMICG00000010134	SEMA5A (ENSMICG00000002641) #33	MTRR (ENSMICG00000002955)	FASTKD3 (ENSMICG00000002954)	CFAP90 (ENSMICG00000034745)	ADCY2 (ENSMICG00000002952)	TENT4A (ENSMICG00000016562)
Lemuriformes_a	ANCESTRAL SPECIES	215			ENSGT00940000154187.a.b #7	ENSGT00940000157512 #8	ENSGT00730000111450 #10	ENSGT00940000155469 #12	ENSGT00940000160746 #13	ENSGT00390000018047 #14	ENSGT00940000160025 #15	ENSGT00940000158009 #16	ENSGT00390000000950.c.a.n	ENSGT00390000012189 #17	ENSGT00390000009802.b #18	ENSGT00390000009802.a #19	ENSGT00940000154766.a.a #20	ENSGT00940000155533.d #22
Greater bamboo lemur	MODERN SPECIES	1543																DNAH5 (ENSPSMG00000011118) #22	ENSPSMG00000011130
Coquerels sifaka	MODERN SPECIES	52					ENSPCOG00000016592	MYO10 (ENSPCOG00000014161) #12	RETREG1 (ENSPCOG00000022290) #13	ZNF622 (ENSPCOG00000020267) #14	MARCHF11 (ENSPCOG00000018629) #15	FBXL7 (ENSPCOG00000016187) #16	ENSPCOG00000021858	ANKH (ENSPCOG00000012875) #17	OTULIN (ENSPCOG00000020862) #18	OTULINL (ENSPCOG00000023521) #19	TRIO (ENSPCOG00000022681) #20	DNAH5 (ENSPCOG00000027561) #22
Bushbaby	MODERN SPECIES	148	ENSOGAG00000030812	ENSOGAG00000012971	ENSOGAG00000003705	CDH12 (ENSOGAG00000012968) #7	CDH18 (ENSOGAG00000004532) #8	MYO10 (ENSOGAG00000014841) #12	RETREG1 (ENSOGAG00000014839) #13	ZNF622 (ENSOGAG00000014834) #14	MARCHF11 (ENSOGAG00000011673) #15	FBXL7 (ENSOGAG00000003172) #16	ENSOGAG00000024319	ANKH (ENSOGAG00000006664) #17	OTULIN (ENSOGAG00000008440) #18	OTULINL (ENSOGAG00000014270) #19	TRIO (ENSOGAG00000014252) #20	DNAH5 (ENSOGAG00000009433) #22	CTNND2 (ENSOGAG00000005411) #23	ENSOGAG00000034923	ANKRD33B (ENSOGAG00000009776) #26	ROPN1L (ENSOGAG00000002306) #27	MARCHF6 (ENSOGAG00000002304) #28	CMBL (ENSOGAG00000016909) #29	CCT5 (ENSOGAG00000029948) #30	ATPSCKMT (ENSOGAG00000003583) #31	ENSOGAG00000024134	ENSOGAG00000031227	TAS2R1 (ENSOGAG00000016076) #32	SEMA5A (ENSOGAG00000016380) #33	MTRR (ENSOGAG00000001029)	FASTKD3 (ENSOGAG00000001028)	CFAP90 (ENSOGAG00000028915)
Laurasiatheria	ANCESTRAL SPECIES	8	ENSGT00940000154187.a.a ##7	ENSGT00940000154187.a.b #7	ENSGT00940000157512 #8	ENSGT00730000111450 #10	ENSGT00940000155469 #12	ENSGT00940000160746 #13	ENSGT00390000018047 #14	ENSGT00940000160025 #15	ENSGT00940000158009 #16	ENSGT00390000012189 #17	ENSGT01090000260321	ENSGT00390000009802.b #18	ENSGT00390000009802.a #19	ENSGT00940000166969.b	ENSGT00940000154766.a.a #20	ENSGT00940000155533.d #22	ENSGT00940000154952.a.b #23	ENSGT00940000154574.c #24	ENSGT00500000044852.a #26	ENSGT00390000012731.a.a #27	ENSGT00940000155171.a.b #28	ENSGT00940000155171.a.a ##28	ENSGT00390000000183 #29	ENSGT00550000074988 #30	ENSGT00390000014771.a #31	ENSGT01100000263477.E #32	ENSGT00940000158036 #33	ENSGT00940000155822	ENSGT01030000234607.A.a.a.a	ENSGT00390000015121	ENSGT00910000148650
Laurasiatheria_a	ANCESTRAL SPECIES	9	ENSGT00940000154187.a.b #7	ENSGT00940000157512 #8	ENSGT00940000159547.d	ENSGT00730000111450 #10	ENSGT00940000155469 #12	ENSGT00940000160746 #13	ENSGT00390000018047 #14	ENSGT00940000160025 #15	ENSGT00940000158009 #16	ENSGT00390000012189 #17	ENSGT01090000260321	ENSGT00390000009802.b #18	ENSGT00390000009802.a #19	ENSGT00940000166969.b	ENSGT00940000154766.a.a #20	ENSGT00940000155533.d #22	ENSGT00940000154952.a.b #23	ENSGT00940000154574.c #24	ENSGT00500000044852.a #26	ENSGT00390000012731.a.a #27	ENSGT00940000155171.a.b #28	ENSGT00940000155171.a.a ##28	ENSGT00390000000183 #29	ENSGT00550000074988 #30	ENSGT00390000014771.a #31	ENSGT01100000263477.E #32	ENSGT00940000158036 #33	ENSGT00940000155822	ENSGT01030000234607.A.a.a.a	ENSGT00390000015121	ENSGT00910000148650
Artiodactyla	ANCESTRAL SPECIES	8	ENSGT00940000154187.a.a ##7	ENSGT00940000154187.a.b #7	ENSGT00940000157512 #8	ENSGT00940000159547.d	ENSGT00730000111450.g.b #10	ENSGT00940000155469 #12	ENSGT00940000160746 #13	ENSGT00390000018047 #14	ENSGT00940000160025 #15	ENSGT00940000158009 #16	ENSGT00390000012189 #17	ENSGT01090000260321	ENSGT00390000009802.b #18	ENSGT00390000009802.a #19	ENSGT00940000154766.a.a #20	ENSGT00940000155533.d #22	ENSGT00940000154952.a.b #23	ENSGT00940000154574.c #24	ENSGT00500000044852.a #26	ENSGT00390000012731.a.a #27	ENSGT00940000155171.a.b #28	ENSGT00390000000183 #29	ENSGT00550000074988 #30	ENSGT00390000014771.a #31	ENSGT01100000263477.E #32	ENSGT00940000158036 #33	ENSGT00940000155822	ENSGT01030000234607.A.a.a.a	ENSGT00390000015121	ENSGT00910000148650	ENSGT00940000156424
Suina	ANCESTRAL SPECIES	25	ENSGT00940000154187.a.a ##7	ENSGT01070000254103	ENSGT00940000154187.a.b #7	ENSGT00940000157512 #8	ENSGT00940000159547.d	ENSGT00730000111450.g.b #10	ENSGT00940000155469 #12	ENSGT00940000160746 #13	ENSGT00390000018047 #14	ENSGT00940000160025 #15	ENSGT00940000158009 #16	ENSGT00390000012189 #17	ENSGT00390000009802.b #18	ENSGT00390000009802.a #19	ENSGT00940000154766.a.a #20	ENSGT00940000155533.d #22	ENSGT00940000154952.a.b #23	ENSGT00940000154574.c #24	ENSGT00500000044852.a #26	ENSGT00390000012731.a.a #27
Pig	MODERN SPECIES	7	CDH18 (ENSSSCG00000026842) #8	ENSSSCG00000043590	ENSSSCG00000016796	ENSSSCG00000039222 #10	MYO10 (ENSSSCG00000016794) #12	RETREG1 (ENSSSCG00000016792) #13	ZNF622 (ENSSSCG00000016793) #14	ENSSSCG00000016791	MARCHF11 (ENSSSCG00000031525) #15	ENSSSCG00000016789	FBXL7 (ENSSSCG00000028239) #16	ANKH (ENSSSCG00000016784) #17	OTULIN (ENSSSCG00000034714) #18	OTULINL (ENSSSCG00000016782) #19	TRIO (ENSSSCG00000016781) #20	DNAH5 (ENSSSCG00000032827) #22	CTNND2 (ENSSSCG00000016780) #23	DAP (ENSSSCG00000032942) #24	ANKRD33B (ENSSSCG00000039609) #26	ROPN1L (ENSSSCG00000022306) #27
Chacoan peccary	MODERN SPECIES	164														OTULINL (ENSCWAG00000020379) #19	TRIO (ENSCWAG00000020416) #20	DNAH5 (ENSCWAG00000020552) #22	CTNND2 (ENSCWAG00000020670) #23	ENSCWAG00000020833	ANKRD33B (ENSCWAG00000020847) #26	ROPN1L (ENSCWAG00000020860) #27
Artiodactyla_a	ANCESTRAL SPECIES	7	ENSGT00940000157512 #8	ENSGT00940000159547.d	ENSGT00730000111450.h #10	ENSGT00390000013228.e.b	ENSGT00730000111450.g.b #10	ENSGT00940000155469 #12	ENSGT00940000160746 #13	ENSGT00390000018047 #14	ENSGT00940000160025 #15	ENSGT00940000158009 #16	ENSGT00390000012189 #17	ENSGT01090000260321	ENSGT00390000009802.b #18	ENSGT00390000009802.a #19	ENSGT00940000154766.a.a #20	ENSGT00940000155533.d #22	ENSGT00940000154952.a.b #23	ENSGT00940000154574.c #24	ENSGT00500000044852.a #26	ENSGT00390000012731.a.a #27	ENSGT00940000155171.a.b #28	ENSGT00390000000183 #29	ENSGT00550000074988 #30	ENSGT00390000014771.a #31	ENSGT01100000263477.E #32	ENSGT00940000158036 #33	ENSGT00940000155822	ENSGT01030000234607.A.a.a.a	ENSGT00390000015121	ENSGT00910000148650	ENSGT00940000156424
Artiodactyla_b	ANCESTRAL SPECIES	8	ENSGT00940000157512 #8	ENSGT00940000159547.d	ENSGT00390000013228.e.b	ENSGT00730000111450.h #10	ENSGT00730000111450.g.b #10	ENSGT00940000155469 #12	ENSGT00940000160746 #13	ENSGT00390000018047 #14	ENSGT00940000160025 #15	ENSGT00940000158009 #16	ENSGT00390000012189 #17	ENSGT01090000260321	ENSGT00390000009802.b #18	ENSGT00390000009802.a #19	ENSGT00940000154766.a.a #20	ENSGT00940000155533.d #22	ENSGT00940000154952.a.b #23	ENSGT00940000154574.c #24	ENSGT00500000044852.a #26	ENSGT00390000012731.a.a #27	ENSGT00940000155171.a.b #28	ENSGT00390000000183 #29	ENSGT00550000074988 #30	ENSGT00390000014771.a #31	ENSGT01100000263477.E #32	ENSGT00940000158036 #33	ENSGT00940000155822	ENSGT01030000234607.A.a.a.a	ENSGT00390000015121	ENSGT00910000148650	ENSGT00940000156424
Cetacea	ANCESTRAL SPECIES	1	ENSGT00940000154187.a.b #7	ENSGT00940000157512 #8	ENSGT00940000159547.d	ENSGT00390000013228.e.b	ENSGT00730000111450.h #10	ENSGT00940000155469 #12	ENSGT00940000160746 #13	ENSGT00390000018047 #14	ENSGT00940000160025 #15	ENSGT00940000158009 #16	ENSGT00390000012189 #17	ENSGT01090000260321	ENSGT00390000009802.b #18	ENSGT00390000009802.a #19	ENSGT00940000154766.a.a #20	ENSGT00940000155533.d #22	ENSGT00940000154952.a.b #23	ENSGT00940000154574.c #24	ENSGT00500000044852.a #26	ENSGT00390000012731.a.a #27	ENSGT00950000183198.c.b.a.t.a	ENSGT00940000155171.a.b #28	ENSGT00390000000183 #29	ENSGT00550000074988 #30	ENSGT00390000014771.a #31	ENSGT01030000235349	ENSGT00940000158036 #33	ENSGT00940000155822	ENSGT01030000234607.A.a.a.a	ENSGT00390000015121	ENSGT00940000156424
Odontoceti	ANCESTRAL SPECIES	1	ENSGT00940000154187.a.b #7	ENSGT00940000157512 #8	ENSGT00940000159547.d	ENSGT00390000013228.e.b	ENSGT00730000111450.h #10	ENSGT00940000155469 #12	ENSGT00940000160746 #13	ENSGT00390000018047 #14	ENSGT00940000160025 #15	ENSGT00940000158009 #16	ENSGT00390000012189 #17	ENSGT01090000260321	ENSGT00390000009802.b #18	ENSGT00390000009802.a #19	ENSGT00940000154766.a.a #20	ENSGT00940000155533.d #22	ENSGT00940000154952.a.b #23	ENSGT00940000154574.c #24	ENSGT00500000044852.a #26	ENSGT00390000012731.a.a #27	ENSGT00950000183198.c.b.a.t.a	ENSGT00940000155171.a.b #28	ENSGT00390000000183 #29	ENSGT00550000074988 #30	ENSGT00390000014771.a #31	ENSGT00940000158036 #33	ENSGT00940000155822	ENSGT01030000234607.A.a.a.a	ENSGT00390000015121	ENSGT00940000156424	ENSGT00940000157811
Odontoceti_a	ANCESTRAL SPECIES	1	ENSGT00940000154187.a.a ##7	ENSGT00940000154187.a.b #7	ENSGT00940000157512 #8	ENSGT00940000159547.d	ENSGT00390000013228.e.b	ENSGT00730000111450.h #10	ENSGT00940000155469 #12	ENSGT00940000160746 #13	ENSGT00390000018047 #14	ENSGT00940000160025 #15	ENSGT00940000158009 #16	ENSGT00390000012189 #17	ENSGT00390000009802.b #18	ENSGT00390000009802.a #19	ENSGT00940000154766.a.a #20	ENSGT00940000155533.d #22	ENSGT00940000154952.a.b #23	ENSGT00940000154574.c #24	ENSGT00500000044852.a #26	ENSGT00390000012731.a.a #27	ENSGT00940000155171.a.b #28	ENSGT00390000000183 #29	ENSGT00550000074988 #30	ENSGT00390000014771.a #31	ENSGT00940000158036 #33	ENSGT00940000155822	ENSGT01030000234607.A.a.a.a	ENSGT00390000015121	ENSGT00940000156424	ENSGT00940000157811	ENSGT00950000182886.b.b
Odontoceti_b	ANCESTRAL SPECIES	1	ENSGT00980000202649	ENSGT00940000154187.a.b #7	ENSGT00940000157512 #8	ENSGT00940000159547.d	ENSGT00390000013228.e.b	ENSGT00730000111450.h #10	ENSGT00940000155469 #12	ENSGT00940000160746 #13	ENSGT00390000018047 #14	ENSGT00940000160025 #15	ENSGT00940000158009 #16	ENSGT00390000012189 #17	ENSGT00390000009802.b #18	ENSGT00390000009802.a #19	ENSGT00940000154766.a.a #20	ENSGT00940000155533.d #22	ENSGT00940000154952.a.b #23	ENSGT00940000154574.c #24	ENSGT00500000044852.a #26	ENSGT00390000012731.a.a #27	ENSGT00940000155171.a.b #28	ENSGT00390000000183 #29	ENSGT00550000074988 #30	ENSGT00390000014771.a #31	ENSGT00940000158036 #33	ENSGT00940000155822	ENSGT01030000234607.A.a.a.a	ENSGT00390000015121	ENSGT00940000156424	ENSGT00940000157811	ENSGT00950000182886.b.b
Monodontidae	ANCESTRAL SPECIES	7	ENSGT00980000202649	ENSGT00940000154187.a.b #7	ENSGT00940000157512 #8	ENSGT00940000159547.d	ENSGT00390000013228.e.b	ENSGT00730000111450.h #10	ENSGT00940000155469 #12	ENSGT00940000160746 #13	ENSGT00390000018047 #14	ENSGT00940000160025 #15	ENSGT00940000158009 #16	ENSGT00390000012189 #17	ENSGT00390000009802.b #18	ENSGT00390000009802.a #19	ENSGT00940000154766.a.a #20	ENSGT00940000155533.d #22	ENSGT00390000018829.g.b.d	ENSGT00530000063929.a.a.e.b	ENSGT00940000154952.a.b #23	ENSGT00940000154574.c #24	ENSGT00500000044852.a #26	ENSGT00390000012731.a.a #27	ENSGT00940000155171.a.b #28	ENSGT00390000000183 #29	ENSGT00550000074988 #30	ENSGT00390000014771.a #31	ENSGT00940000158036 #33	ENSGT00940000155822	ENSGT01030000234607.A.a.a.a	ENSGT00390000015121	ENSGT00940000156424
Beluga whale	MODERN SPECIES	16	ENSDLEG00000003035	ENSDLEG00000003030 #10	MYO10 (ENSDLEG00000002973) #12	RETREG1 (ENSDLEG00000002953) #13	ZNF622 (ENSDLEG00000002935) #14	ENSDLEG00000002924	MARCHF11 (ENSDLEG00000002915) #15	FBXL7 (ENSDLEG00000002908) #16	ENSDLEG00000002904	ENSDLEG00000002893	ANKH (ENSDLEG00000002865) #17	OTULIN (ENSDLEG00000002839) #18	FAM105A (ENSDLEG00000002824) #19	TRIO (ENSDLEG00000001825) #20	ENSDLEG00000001564	DNAH5 (ENSDLEG00000001370) #22	ENSDLEG00000001339	ENSDLEG00000001324	ENSDLEG00000001313	CTNND2 (ENSDLEG00000001157) #23	ENSDLEG00000001124	DAP (ENSDLEG00000001108) #24	ANKRD33B (ENSDLEG00000001095) #26	ROPN1L (ENSDLEG00000001073) #27	MARCH6 (ENSDLEG00000000992) #28	CMBL (ENSDLEG00000000961) #29	CCT5 (ENSDLEG00000000940) #30	ATPSCKMT (ENSDLEG00000000926) #31	SEMA5A (ENSDLEG00000000752) #33	MTRR (ENSDLEG00000000694)	FASTKD3 (ENSDLEG00000000670)
Narwhal	MODERN SPECIES	298	CDH18 (ENSMMNG00015007252) #8	ENSMMNG00015007206	ENSMMNG00015007196	ENSMMNG00015007183	BASP1 (ENSMMNG00015007172) #10	MYO10 (ENSMMNG00015006986) #12	RETREG1 (ENSMMNG00015006854) #13	ZNF622 (ENSMMNG00015006807) #14	ENSMMNG00015006789	MARCHF11 (ENSMMNG00015006768) #15	FBXL7 (ENSMMNG00015006745) #16	ANKH (ENSMMNG00015006722) #17	OTULIN (ENSMMNG00015006695) #18	OTULINL (ENSMMNG00015006675) #19	TRIO (ENSMMNG00015006412) #20	DNAH5 (ENSMMNG00015006185) #22	ENSMMNG00015006148	ENSMMNG00015006124	CTNND2 (ENSMMNG00015005980) #23	DAP (ENSMMNG00015005933) #24	ANKRD33B (ENSMMNG00015005921) #26	ROPN1L (ENSMMNG00015005909) #27	MARCHF6 (ENSMMNG00015005820) #28	CMBL (ENSMMNG00015005779) #29	CCT5 (ENSMMNG00015005728) #30	ATPSCKMT (ENSMMNG00015005677) #31	SEMA5A (ENSMMNG00015005625) #33	ENSMMNG00015005605	ENSMMNG00015005590	MTRR (ENSMMNG00015005557)	FASTKD3 (ENSMMNG00015005536)
Vaquita	MODERN SPECIES	14	CDH12 (ENSPSNG00000008078) #7	CDH18 (ENSPSNG00000008241) #8	ENSPSNG00000008306	ENSPSNG00000008390	BASP1 (ENSPSNG00000008407) #10	MYO10 (ENSPSNG00000008517) #12	RETREG1 (ENSPSNG00000008600) #13	ZNF622 (ENSPSNG00000008731) #14	ENSPSNG00000008763	MARCHF11 (ENSPSNG00000008797) #15	FBXL7 (ENSPSNG00000008848) #16	ANKH (ENSPSNG00000000115) #17	OTULIN (ENSPSNG00000000165) #18	OTULINL (ENSPSNG00000000205) #19	TRIO (ENSPSNG00000000361) #20	DNAH5 (ENSPSNG00000000658) #22	CTNND2 (ENSPSNG00000000871) #23	ENSPSNG00000001006	ANKRD33B (ENSPSNG00000001044) #26	ROPN1L (ENSPSNG00000001126) #27	MARCHF6 (ENSPSNG00000001274) #28	CMBL (ENSPSNG00000001379) #29	CCT5 (ENSPSNG00000001419) #30	ATPSCKMT (ENSPSNG00000001462) #31	SEMA5A (ENSPSNG00000001504) #33	ENSPSNG00000001545	MTRR (ENSPSNG00000001565)	FASTKD3 (ENSPSNG00000001602)	CFAP90 (ENSPSNG00000001622)	ADCY2 (ENSPSNG00000001660)	TENT4A (ENSPSNG00000001714)
Dolphin	MODERN SPECIES	101															TRIO (ENSTTRG00000011119) #20	DNAH5 (ENSTTRG00000011115) #22
Sperm whale	MODERN SPECIES	19	BASP1 (ENSPCTG00005003406) #10	MYO10 (ENSPCTG00005003379) #12	ENSPCTG00005003348 #14	RETREG1 (ENSPCTG00005003333) #13	ENSPCTG00005003316 #14	ENSPCTG00005003299	ENSPCTG00005003297	MARCH11 (ENSPCTG00005003284) #15	FBXL7 (ENSPCTG00005003269) #16	ENSPCTG00005003250	ANKH (ENSPCTG00005003239) #17	ENSPCTG00005003233	OTULIN (ENSPCTG00005003221) #18	OTULINL (ENSPCTG00005003212) #19	TRIO (ENSPCTG00005003109) #20	DNAH5 (ENSPCTG00005003015) #22	ENSPCTG00005002988	ENSPCTG00005002979	ENSPCTG00005002965	CTNND2 (ENSPCTG00005002822) #23	DAP (ENSPCTG00005002789) #24	ANKRD33B (ENSPCTG00005002770) #26	ROPN1L (ENSPCTG00005002753) #27	ENSPCTG00005002747	MARCH6 (ENSPCTG00005002477) #28	CMBL (ENSPCTG00005002401) #29	CCT5 (ENSPCTG00005002365) #30	ATPSCKMT (ENSPCTG00005002344) #31	SEMA5A (ENSPCTG00005002330) #33	MTRR (ENSPCTG00005002314)	FASTKD3 (ENSPCTG00005002301)
Blue whale	MODERN SPECIES	14	BASP1 (ENSBMSG00010017687) #10	ENSBMSG00010017662	ENSBMSG00010017604 #12	ENSBMSG00010017567	RETREG1 (ENSBMSG00010017525) #13	ZNF622 (ENSBMSG00010017487) #14	ENSBMSG00010017471	ENSBMSG00010017457	MARCHF11 (ENSBMSG00010017427) #15	FBXL7 (ENSBMSG00010017389) #16	ANKH (ENSBMSG00010017320) #17	ENSBMSG00010017287	ENSBMSG00010017247 #18	OTULINL (ENSBMSG00010017214) #19	TRIO (ENSBMSG00010016884) #20	DNAH5 (ENSBMSG00010016560) #22	ENSBMSG00010016511	ENSBMSG00010016498	ENSBMSG00010016472	CTNND2 (ENSBMSG00010016138) #23	DAP (ENSBMSG00010016082) #24	ANKRD33B (ENSBMSG00010016062) #26	ROPN1L (ENSBMSG00010016036) #27	ENSBMSG00010016023	MARCHF6 (ENSBMSG00010015821) #28	CMBL (ENSBMSG00010015715) #29	CCT5 (ENSBMSG00010015626) #30	ATPSCKMT (ENSBMSG00010015593) #31	ENSBMSG00010015568	SEMA5A (ENSBMSG00010015493) #33	MTRR (ENSBMSG00010015453)
Pecora	ANCESTRAL SPECIES	25	ENSGT01070000254103	ENSGT00940000154187.a.b #7	ENSGT00940000157512 #8	ENSGT00940000159547.d	ENSGT00390000013228.e.b	ENSGT00730000111450.g.b #10	ENSGT00940000155469 #12	ENSGT00940000160746 #13	ENSGT00390000018047 #14	ENSGT00940000160025 #15	ENSGT00940000158009 #16	ENSGT00390000012189 #17	ENSGT00390000009802.b #18	ENSGT00390000009802.a #19	ENSGT00940000154766.a.a #20	ENSGT00940000155533.d #22	ENSGT00940000154952.a.b #23	ENSGT00940000154574.c #24	ENSGT00500000044852.a #26	ENSGT00390000012731.a.a #27	ENSGT00940000155171.a.b #28	ENSGT00390000000183 #29	ENSGT00550000074988 #30	ENSGT00390000014771.a #31	ENSGT01100000263477.E #32	ENSGT00940000158036 #33	ENSGT00940000155822	ENSGT01030000234607.A.a.a.a	ENSGT00390000015121	ENSGT00910000148650	ENSGT00940000156424
Percora_a	ANCESTRAL SPECIES	26	ENSGT01070000254103	ENSGT00940000154187.a.b #7	ENSGT00940000157512 #8	ENSGT00940000159547.d	ENSGT00390000013228.e.b	ENSGT00730000111450.g.b #10	ENSGT00940000155469 #12	ENSGT00940000160746 #13	ENSGT00390000018047 #14	ENSGT00940000160025 #15	ENSGT00940000158009 #16	ENSGT00390000012189 #17	ENSGT00390000009802.b #18	ENSGT00390000009802.a #19	ENSGT00940000154766.a.a #20	ENSGT00940000155533.d #22	ENSGT00940000154952.a.b #23	ENSGT00940000154574.c #24	ENSGT00500000044852.a #26	ENSGT00390000012731.a.a #27	ENSGT00940000155171.a.b #28	ENSGT00390000000183 #29	ENSGT00550000074988 #30	ENSGT00390000014771.a #31	ENSGT01100000263477.E #32	ENSGT00940000158036 #33	ENSGT00940000155822	ENSGT01030000234607.A.a.a.a	ENSGT00390000015121	ENSGT00910000148650	ENSGT00940000156424
Bovidae	ANCESTRAL SPECIES	26	ENSGT00940000157512 #8	ENSGT00940000154598.ac.a	ENSGT00940000159547.d	ENSGT00390000013228.e.b	ENSGT00390000008610.a.b.a.a.a	ENSGT00730000111450.g.b #10	ENSGT00940000155469 #12	ENSGT00940000160746 #13	ENSGT00390000018047 #14	ENSGT00940000160025 #15	ENSGT00940000158009 #16	ENSGT00390000012189 #17	ENSGT00390000009802.b #18	ENSGT00390000009802.a #19	ENSGT00940000154766.a.a #20	ENSGT00940000155533.d #22	ENSGT00940000154952.a.b #23	ENSGT00940000154574.c #24	ENSGT00500000044852.a #26	ENSGT00390000012731.a.a #27	ENSGT00940000155171.a.b #28	ENSGT00390000000183 #29	ENSGT00550000074988 #30	ENSGT00390000014771.a #31	ENSGT01100000263477.E #32	ENSGT00940000158036 #33	ENSGT00940000155822	ENSGT01030000234607.A.a.a.a	ENSGT00390000015121	ENSGT00910000148650	ENSGT00940000156424
Caprinae	ANCESTRAL SPECIES	24	ENSGT00390000011864.e	ENSGT00940000154187.a.b #7	ENSGT00940000157512 #8	ENSGT00940000154598.ac.a	ENSGT00940000159547.d	ENSGT00730000111450.g.b #10	ENSGT00940000155469 #12	ENSGT00940000160746 #13	ENSGT00390000018047 #14	ENSGT00940000160025 #15	ENSGT00940000158009 #16	ENSGT00390000012189 #17	ENSGT00390000009802.b #18	ENSGT00390000009802.a #19	ENSGT00940000154766.a.a #20	ENSGT00940000155533.d #22	ENSGT00940000154952.a.b #23	ENSGT00940000154574.c #24	ENSGT00500000044852.a #26	ENSGT00390000012731.a.a #27	ENSGT00940000155171.a.b #28	ENSGT00390000000183 #29	ENSGT00550000074988 #30	ENSGT00390000014771.a #31	ENSGT01100000263477.E #32	ENSGT00940000158036 #33	ENSGT00940000155822	ENSGT01030000234607.A.a.a.a	ENSGT00390000015121	ENSGT00940000156424	ENSGT01050000244868.a.a.a.b.a.b.a.a.a.a.b.d
Goat	MODERN SPECIES	12	ENSCHIG00000019812	ENSCHIG00000000477	ENSCHIG00000012577	BASP1 (ENSCHIG00000006852) #10	ENSCHIG00000010404	MYO10 (ENSCHIG00000023439) #12	RETREG1 (ENSCHIG00000021819) #13	ZNF622 (ENSCHIG00000007951) #14	MARCHF11 (ENSCHIG00000018244) #15	FBXL7 (ENSCHIG00000011704) #16	ANKH (ENSCHIG00000019071) #17	OTULIN (ENSCHIG00000021689) #18	OTULINL (ENSCHIG00000000624) #19	TRIO (ENSCHIG00000016556) #20	ENSCHIG00000016462	DNAH5 (ENSCHIG00000021054) #22	CTNND2 (ENSCHIG00000013482) #23	DAP (ENSCHIG00000018806) #24	ANKRD33B (ENSCHIG00000021552) #26	ROPN1L (ENSCHIG00000024633) #27	MARCHF6 (ENSCHIG00000017175) #28	CMBL (ENSCHIG00000023506) #29	CCT5 (ENSCHIG00000018198) #30	ATPSCKMT (ENSCHIG00000018299) #31	ENSCHIG00000019011	SEMA5A (ENSCHIG00000013180) #33	ENSCHIG00000001904	MTRR (ENSCHIG00000019340)	FASTKD3 (ENSCHIG00000018823)	CFAP90 (ENSCHIG00000025918)	ADCY2 (ENSCHIG00000023502)
Rambouillet Sheep	MODERN SPECIES	7	ENSOARG00020013447	CDH18 (ENSOARG00020013503) #8	ENSOARG00020013600	ENSOARG00020013658	ENSOARG00020013700	ENSOARG00020013742 #10	MYO10 (ENSOARG00020013822) #12	RETREG1 (ENSOARG00020014626) #13	ZNF622 (ENSOARG00020014823) #14	MARCHF11 (ENSOARG00020014889) #15	FBXL7 (ENSOARG00020014968) #16	ANKH (ENSOARG00020015114) #17	OTULIN (ENSOARG00020015362) #18	OTULINL (ENSOARG00020015405) #19	TRIO (ENSOARG00020015605) #20	DNAH5 (ENSOARG00020019327) #22	ENSOARG00020019873	CTNND2 (ENSOARG00020019950) #23	ENSOARG00020020806	DAP (ENSOARG00020020846) #24	MARCHF6 (ENSOARG00020020993) #28	CMBL (ENSOARG00020021802) #29	CCT5 (ENSOARG00020021843) #30	ATPSCKMT (ENSOARG00020021986) #31	ENSOARG00020022027 #32	SEMA5A (ENSOARG00020022080) #33	ENSOARG00020022435	MTRR (ENSOARG00020022449)	FASTKD3 (ENSOARG00020022521)	CFAP90 (ENSOARG00020022548)	ADCY2 (ENSOARG00020022595)
Bovinae	ANCESTRAL SPECIES	25	ENSGT00940000154509.y.b.b	ENSGT00940000157512 #8	ENSGT00940000154598.ac.a	ENSGT00940000159547.d	ENSGT00390000013228.e.b	ENSGT00730000111450.g.b #10	ENSGT00940000155469 #12	ENSGT00940000160746 #13	ENSGT00390000018047 #14	ENSGT00940000160025 #15	ENSGT00940000158009 #16	ENSGT00390000012189 #17	ENSGT00390000009802.b #18	ENSGT00390000009802.a #19	ENSGT00940000154766.a.a #20	ENSGT00940000155533.d #22	ENSGT00940000154952.a.b #23	ENSGT00940000154574.c #24	ENSGT00500000044852.a #26	ENSGT00390000012731.a.a #27	ENSGT00940000155171.a.b #28	ENSGT00390000000183 #29	ENSGT00550000074988 #30	ENSGT00390000014771.a #31	ENSGT01100000263477.E #32	ENSGT00940000158036 #33	ENSGT00940000155822	ENSGT01030000234607.A.a.a.a	ENSGT00390000015121	ENSGT00910000148650	ENSGT00940000156424
Bos	ANCESTRAL SPECIES	26	ENSGT00940000154187.a.b #7	ENSGT00940000154509.y.b.b	ENSGT00940000157512 #8	ENSGT00940000159547.d	ENSGT00390000013228.e.b.a	ENSGT00730000111450.g.b #10	ENSGT00940000155469 #12	ENSGT00940000160746 #13	ENSGT00390000018047 #14	ENSGT00940000160025 #15	ENSGT00940000158009 #16	ENSGT00390000012189 #17	ENSGT00390000009802.b #18	ENSGT00390000009802.a #19	ENSGT00940000154766.a.a #20	ENSGT00940000155533.d #22	ENSGT00940000154952.a.b #23	ENSGT00940000154574.c #24	ENSGT00500000044852.a #26	ENSGT00390000012731.a.a #27	ENSGT00940000155171.a.b #28	ENSGT00390000000183 #29	ENSGT00550000074988 #30	ENSGT00390000014771.a #31	ENSGT01100000263477.E #32	ENSGT00940000158036 #33	ENSGT00940000155822	ENSGT01030000234607.A.a.a.a	ENSGT00390000015121	ENSGT00940000156424	ENSGT01050000244868.a.a.a.b.a.b.a.a.a.a.b.d
Bos_a	ANCESTRAL SPECIES	38	ENSGT00940000154187.a.b #7	ENSGT00940000154509.y.b.b	ENSGT00940000157512 #8	ENSGT00940000159547.d	ENSGT00390000013228.e.b.a	ENSGT00730000111450.g.b #10	ENSGT00940000155469 #12	ENSGT00940000160746 #13	ENSGT00390000018047 #14	ENSGT00940000160025 #15	ENSGT00940000158009 #16	ENSGT00390000012189 #17	ENSGT00390000009802.b #18	ENSGT00390000009802.a #19	ENSGT00940000154766.a.a #20	ENSGT00940000155533.d #22	ENSGT00940000154952.a.b #23	ENSGT00940000154574.c #24	ENSGT00500000044852.a #26	ENSGT00390000012731.a.a #27	ENSGT00940000155171.a.b #28	ENSGT00390000000183 #29	ENSGT00550000074988 #30	ENSGT00390000014771.a #31	ENSGT01100000263477.E #32	ENSGT00940000158036 #33	ENSGT00940000155822	ENSGT01030000234607.A.a.a.a	ENSGT00390000015121	ENSGT00940000156424	ENSGT00940000157811
Wild yak	MODERN SPECIES	40												OTULIN (ENSBMUG00000025500) #18	OTULINL (ENSBMUG00000025496) #19	ENSBMUG00000025491 #20	ENSBMUG00000025487 #20	DNAH5 (ENSBMUG00000025479) #22
Domestic yak	MODERN SPECIES	15	ENSBGRG00000007130	CDH18 (ENSBGRG00000006988) #8	ENSBGRG00000021278	ENSBGRG00000021130	ENSBGRG00000021114 #10	MYO10 (ENSBGRG00000020569) #12	FAM134B (ENSBGRG00000020222) #13	ZNF622 (ENSBGRG00000020128) #14	MARCHF11 (ENSBGRG00000020077) #15	FBXL7 (ENSBGRG00000020043) #16	ANKH (ENSBGRG00000019829) #17	OTULIN (ENSBGRG00000019637) #18	OTULINL (ENSBGRG00000019549) #19	ENSBGRG00000019222 #20	ENSBGRG00000018948 #20	DNAH5 (ENSBGRG00000018062) #22	ENSBGRG00000017939	CTNND2 (ENSBGRG00000016883) #23	ENSBGRG00000016754 #24	ANKRD33B (ENSBGRG00000016682) #26	MARCHF6 (ENSBGRG00000013423) #28	CMBL (ENSBGRG00000013187) #29	CCT5 (ENSBGRG00000012720) #30	ATPSCKMT (ENSBGRG00000012505) #31	ENSBGRG00000012367	SEMA5A (ENSBGRG00000011867) #33	MTRR (ENSBGRG00000011588)	FASTKD3 (ENSBGRG00000011515)	CFAP90 (ENSBGRG00000011468)	ADCY2 (ENSBGRG00000009979)	TENT4A (ENSBGRG00000009794)
Bos_b	ANCESTRAL SPECIES	29	ENSGT00940000154187.a.b #7	ENSGT00940000154509.y.b.b	ENSGT00940000157512 #8	ENSGT00940000159547.d	ENSGT00390000013228.e.b.a	ENSGT00730000111450.g.b #10	ENSGT00940000155469 #12	ENSGT00940000160746 #13	ENSGT00390000018047 #14	ENSGT00940000160025 #15	ENSGT00940000158009 #16	ENSGT00390000012189 #17	ENSGT00390000009802.b #18	ENSGT00390000009802.a #19	ENSGT00940000154766.a.a #20	ENSGT00940000155533.d #22	ENSGT00940000154952.a.b #23	ENSGT00940000154574.c #24	ENSGT00500000044852.a #26	ENSGT00390000012731.a.a #27	ENSGT00940000155171.a.b #28	ENSGT00390000000183 #29	ENSGT00550000074988 #30	ENSGT00390000014771.a #31	ENSGT01100000263477.E #32	ENSGT01100000263481.n.a.a.a.a.a.a.b.b.a.a.b.b	ENSGT00940000158036 #33	ENSGT00940000155822	ENSGT01030000234607.A.a.a.a	ENSGT00390000015121	ENSGT00940000156424
Hybrid Bos Indicus	MODERN SPECIES	12	ENSBIXG00005030260	ENSBIXG00005030265	ENSBIXG00005030286 #10	MYO10 (ENSBIXG00005030308) #12	RETREG1 (ENSBIXG00005030325) #13	ZNF622 (ENSBIXG00005030343) #14	MARCHF11 (ENSBIXG00005030353) #15	FBXL7 (ENSBIXG00005030372) #16	ENSBIXG00005030392	ANKH (ENSBIXG00005030407) #17	OTULIN (ENSBIXG00005030412) #18	OTULINL (ENSBIXG00005030429) #19	ENSBIXG00005030443 #20	ENSBIXG00005030459 #20	ENSBIXG00005030473	DNAH5 (ENSBIXG00005030493) #22	CTNND2 (ENSBIXG00005005195) #23	ENSBIXG00005005156 #24	ANKRD33B (ENSBIXG00005001972) #26	ROPN1L (ENSBIXG00005002000) #27	MARCHF6 (ENSBIXG00005005112) #28	ENSBIXG00005005028 #29	CCT5 (ENSBIXG00005005013) #30	ATPSCKMT (ENSBIXG00005028756) #31	TAS2R1 (ENSBIXG00005028671) #32	ENSBIXG00005028663	ENSBIXG00005002382	MTRR (ENSBIXG00005006640)	FASTKD3 (ENSBIXG00005028543)	CFAP90 (ENSBIXG00005006543)	ADCY2 (ENSBIXG00005028463)
Cow	MODERN SPECIES	12	ENSBTAG00000053920	ENSBTAG00000055246	ENSBTAG00000049518	ENSBTAG00000053528	BASP1 (ENSBTAG00000048565) #10	MYO10 (ENSBTAG00000020126) #12	RETREG1 (ENSBTAG00000016444) #13	ZNF622 (ENSBTAG00000016441) #14	MARCHF11 (ENSBTAG00000037576) #15	FBXL7 (ENSBTAG00000003219) #16	ANKH (ENSBTAG00000013391) #17	OTULIN (ENSBTAG00000003186) #18	OTULINL (ENSBTAG00000000672) #19	TRIO (ENSBTAG00000005514) #20	ENSBTAG00000054860	DNAH5 (ENSBTAG00000021972) #22	ENSBTAG00000053006	ENSBTAG00000049263	CTNND2 (ENSBTAG00000017222) #23	DAP (ENSBTAG00000006346) #24	ANKRD33B (ENSBTAG00000011337) #26	ROPN1L (ENSBTAG00000003539) #27	MARCHF6 (ENSBTAG00000003536) #28	CMBL (ENSBTAG00000010801) #29	CCT5 (ENSBTAG00000017889) #30	ATPSCKMT (ENSBTAG00000017885) #31	TAS2R1 (ENSBTAG00000032508) #32	ENSBTAG00000052324	SEMA5A (ENSBTAG00000005021) #33	ENSBTAG00000051674	MTRR (ENSBTAG00000009401)
American bison	MODERN SPECIES	3308						ENSBBBG00000020182	MYO10 (ENSBBBG00000007383) #12	RETREG1 (ENSBBBG00000020337) #13	ZNF622 (ENSBBBG00000020347) #14	MARCHF11 (ENSBBBG00000005507) #15	FBXL7 (ENSBBBG00000020366) #16	ANKH (ENSBBBG00000020391) #17	OTULIN (ENSBBBG00000005517) #18	OTULINL (ENSBBBG00000020414) #19	TRIO (ENSBBBG00000005564) #20	DNAH5 (ENSBBBG00000020759) #22
Siberian musk deer	MODERN SPECIES	1233	ENSMMSG00000022750	ENSMMSG00000022739	ENSMMSG00000022732	BASP1 (ENSMMSG00000022727) #10	MYO10 (ENSMMSG00000022680) #12	RETREG1 (ENSMMSG00000022645) #13	ZNF622 (ENSMMSG00000022625) #14	MARCHF11 (ENSMMSG00000022610) #15	FBXL7 (ENSMMSG00000022595) #16	ANKH (ENSMMSG00000022568) #17	OTULIN (ENSMMSG00000022546) #18	OTULINL (ENSMMSG00000022534) #19	ENSMMSG00000022506 #20	ENSMMSG00000022496	ENSMMSG00000022427	DNAH5 (ENSMMSG00000022273) #22	CTNND2 (ENSMMSG00000022008) #23	ENSMMSG00000021978	DAP (ENSMMSG00000021965) #24	ANKRD33B (ENSMMSG00000021936) #26	ROPN1L (ENSMMSG00000021911) #27	MARCHF6 (ENSMMSG00000021699) #28	CMBL (ENSMMSG00000021656) #29	CCT5 (ENSMMSG00000021573) #30	ATPSCKMT (ENSMMSG00000021397) #31	ENSMMSG00000021350 #32	ENSMMSG00000021301	SEMA5A (ENSMMSG00000021177) #33	MTRR (ENSMMSG00000021088)	FASTKD3 (ENSMMSG00000021063)	CFAP90 (ENSMMSG00000021039)
Yarkand deer	MODERN SPECIES	17	ENSCHYG00000010075	ENSCHYG00000010107 #10	MYO10 (ENSCHYG00000010240) #12	RETREG1 (ENSCHYG00000012421) #13	ZNF622 (ENSCHYG00000012501) #14	MARCHF11 (ENSCHYG00000012594) #15	FBXL7 (ENSCHYG00000012633) #16	ENSCHYG00000012770	ANKH (ENSCHYG00000012797) #17	OTULIN (ENSCHYG00000012858) #18	ENSCHYG00000012895	OTULINL (ENSCHYG00000012915) #19	ENSCHYG00000012999 #20	ENSCHYG00000013264	ENSCHYG00000013334 #20	DNAH5 (ENSCHYG00000013613) #22	CTNND2 (ENSCHYG00000014547) #23	ENSCHYG00000014724	ENSCHYG00000014792	DAP (ENSCHYG00000014843) #24	ANKRD33B (ENSCHYG00000014906) #26	MARCHF6 (ENSCHYG00000015092) #28	CMBL (ENSCHYG00000016335) #29	ENSCHYG00000016373 #30	ATPSCKMT (ENSCHYG00000016616) #31	ENSCHYG00000016710	TAS2R1 (ENSCHYG00000016763) #32	SEMA5A (ENSCHYG00000016807) #33	MTRR (ENSCHYG00000016969)	FASTKD3 (ENSCHYG00000017127)	CFAP90 (ENSCHYG00000017169)
Camelidae	ANCESTRAL SPECIES	1	ENSGT00940000157512 #8	ENSGT00940000159547.d	ENSGT00730000111450.h #10	ENSGT00940000155469 #12	ENSGT00940000160746 #13	ENSGT00390000018047.m.b #14	ENSGT00390000018047.m.a #14	ENSGT00940000160025 #15	ENSGT00940000158009 #16	ENSGT00390000012189 #17	ENSGT01090000260321	ENSGT00390000009802.b #18	ENSGT00390000009802.a #19	ENSGT00940000166969.b	ENSGT00940000154766.a.a #20	ENSGT00940000155533.d #22	ENSGT00940000154952.a.b #23	ENSGT00940000154574.c #24	ENSGT00500000044852.a #26	ENSGT00390000012731.a.a #27	ENSGT00940000155171.a.b #28	ENSGT00390000000183 #29	ENSGT00550000074988 #30	ENSGT00390000014771.a #31	ENSGT01100000263477.E #32	ENSGT00940000158036 #33	ENSGT00940000155822	ENSGT01030000234607.A.a.a.a	ENSGT00390000015121	ENSGT00940000156424	ENSGT00940000157811
Arabian camel	MODERN SPECIES	22	ENSCDRG00005002502	ENSCDRG00005002517 #10	MYO10 (ENSCDRG00005002542) #12	RETREG1 (ENSCDRG00005002579) #13	ENSCDRG00005002600 #14	ENSCDRG00005002615 #14	MARCHF11 (ENSCDRG00005002629) #15	FBXL7 (ENSCDRG00005002650) #16	ANKH (ENSCDRG00005002678) #17	ENSCDRG00005002709	OTULIN (ENSCDRG00005002724) #18	OTULINL (ENSCDRG00005002746) #19	ENSCDRG00005002774 #20	ENSCDRG00005002834	ENSCDRG00005002883 #20	DNAH5 (ENSCDRG00005002951) #22	CTNND2 (ENSCDRG00005003082) #23	DAP (ENSCDRG00005003120) #24	ANKRD33B (ENSCDRG00005003131) #26	ROPN1L (ENSCDRG00005003147) #27	MARCHF6 (ENSCDRG00005003229) #28	CMBL (ENSCDRG00005003573) #29	CCT5 (ENSCDRG00005003627) #30	ATPSCKMT (ENSCDRG00005003839) #31	TAS2R1 (ENSCDRG00005003868) #32	SEMA5A (ENSCDRG00005003914) #33	ENSCDRG00005004152	MTRR (ENSCDRG00005004184)	FASTKD3 (ENSCDRG00005004222)	CFAP90 (ENSCDRG00005004257)	ADCY2 (ENSCDRG00005004299)
Alpaca	MODERN SPECIES	279																DNAH5 (ENSVPAG00000000265) #22
Laurasiatheria_b	ANCESTRAL SPECIES	9	ENSGT00940000154187.a.b #7	ENSGT00940000157512 #8	ENSGT00940000159547.d	ENSGT00730000111450 #10	ENSGT00940000155469 #12	ENSGT00940000160746 #13	ENSGT00390000018047 #14	ENSGT00940000160025 #15	ENSGT00940000158009 #16	ENSGT00390000012189 #17	ENSGT01090000260321	ENSGT00390000009802.b #18	ENSGT00390000009802.a #19	ENSGT00940000166969.b	ENSGT00940000154766.a.a #20	ENSGT00940000155533.d #22	ENSGT00940000154952.a.b #23	ENSGT00940000154574.c #24	ENSGT00500000044852.a #26	ENSGT00390000012731.a.a #27	ENSGT00940000155171.a.b #28	ENSGT00940000155171.a.a ##28	ENSGT00390000000183 #29	ENSGT00550000074988 #30	ENSGT00390000014771.a #31	ENSGT01100000263477.E #32	ENSGT00940000158036 #33	ENSGT00940000155822	ENSGT01030000234607.A.a.a.a	ENSGT00390000015121	ENSGT00940000156424
Laurasiatheria_c	ANCESTRAL SPECIES	7	ENSGT00940000154187.a.a ##7	ENSGT00940000154187.a.b #7	ENSGT00940000157512 #8	ENSGT00390000013228.e.b	ENSGT00730000111450 #10	ENSGT00940000155469 #12	ENSGT00940000160746 #13	ENSGT00390000018047 #14	ENSGT00940000160025 #15	ENSGT00940000158009 #16	ENSGT00390000012189 #17	ENSGT01090000260321	ENSGT00390000009802.b #18	ENSGT00390000009802.a #19	ENSGT00940000154766.a.a #20	ENSGT00940000155533.d #22	ENSGT00940000154952.a.b #23	ENSGT00940000154574.c #24	ENSGT00500000044852.a #26	ENSGT00390000012731.a.a #27	ENSGT00940000155171.a.b #28	ENSGT00390000000183 #29	ENSGT00550000074988 #30	ENSGT00390000014771.a #31	ENSGT01100000263477.E #32	ENSGT00940000158036 #33	ENSGT00940000155822	ENSGT01030000234607.A.a.a.a	ENSGT00390000015121	ENSGT00940000156424	ENSGT00940000157811
Chiroptera	ANCESTRAL SPECIES	1	ENSGT00940000154187.a.a ##7	ENSGT00940000154673.b	ENSGT00940000154187.a.b #7	ENSGT00940000157512 #8	ENSGT00390000013228.e.b	ENSGT00730000111450 #10	ENSGT00940000155469 #12	ENSGT00940000160746 #13	ENSGT00390000018047 #14	ENSGT00940000160025 #15	ENSGT00940000158009 #16	ENSGT00390000012189 #17	ENSGT00390000009802.b #18	ENSGT00390000009802.a #19	ENSGT00940000154766.a.a #20	ENSGT00940000155533.d #22	ENSGT00940000154952.a.b #23	ENSGT00940000154574.c #24	ENSGT00500000044852.a #26	ENSGT00390000012731.a.a #27	ENSGT00940000155171.a.b #28	ENSGT00390000000183 #29	ENSGT00550000074988 #30	ENSGT00390000014771.a #31	ENSGT01100000263477.E #32	ENSGT00940000158036 #33	ENSGT00940000155822	ENSGT01030000234607.A.a.a.a	ENSGT00390000015121	ENSGT00940000156424	ENSGT00940000157811
Megabat	MODERN SPECIES	545																DNAH5 (ENSPVAG00000012440) #22
Microchiroptera	ANCESTRAL SPECIES	3	ENSGT00940000154187.a.a ##7	ENSGT00940000154673.b	ENSGT00940000154187.a.b #7	ENSGT00940000157512 #8	ENSGT00390000013228.e.b	ENSGT00730000111450 #10	ENSGT00940000155469 #12	ENSGT00940000160746 #13	ENSGT00390000018047 #14	ENSGT00940000160025 #15	ENSGT00940000158009 #16	ENSGT00390000012189 #17	ENSGT00390000009802.b #18	ENSGT00390000009802.a #19	ENSGT00940000154766.a.a #20	ENSGT00940000155533.d #22	ENSGT00940000154952.a.b #23	ENSGT00940000154574.c #24	ENSGT00500000044852.a #26	ENSGT00390000012731.a.a #27	ENSGT00940000155171.a.b #28	ENSGT00390000000183 #29	ENSGT00550000074988 #30	ENSGT00390000014771.a #31	ENSGT01100000263477.E #32	ENSGT00940000158036 #33	ENSGT00940000155822	ENSGT01030000234607.A.a.a.a	ENSGT00390000015121	ENSGT00940000156424	ENSGT00940000157811
Microbat	MODERN SPECIES	937	ENSMLUG00000006406	CDH18 (ENSMLUG00000007826) #8	ENSMLUG00000027425	BASP1 (ENSMLUG00000023928) #10	ENSMLUG00000024599	MYO10 (ENSMLUG00000009101) #12	RETREG1 (ENSMLUG00000007101) #13	MARCHF11 (ENSMLUG00000003673) #15	ZNF622 (ENSMLUG00000007088) #14	MYADM (ENSMLUG00000015492)	FBXL7 (ENSMLUG00000007857) #16	ANKH (ENSMLUG00000005172) #17	OTULIN (ENSMLUG00000000810) #18	OTULINL (ENSMLUG00000000804) #19	TRIO (ENSMLUG00000000763) #20	DNAH5 (ENSMLUG00000003652) #22	CTNND2 (ENSMLUG00000000833) #23
Greater horseshoe bat	MODERN SPECIES	25	CDH18 (ENSRFEG00010004292) #8	BASP1 (ENSRFEG00010004237) #10	ENSRFEG00010004228	MYO10 (ENSRFEG00010004145) #12	ENSRFEG00010004116	RETREG1 (ENSRFEG00010004080) #13	ZNF622 (ENSRFEG00010004066) #14	MARCHF11 (ENSRFEG00010004055) #15	FBXL7 (ENSRFEG00010004038) #16	ENSRFEG00010004021	ANKH (ENSRFEG00010003994) #17	OTULIN (ENSRFEG00010003972) #18	ENSRFEG00010003959	OTULINL (ENSRFEG00010003944) #19	TRIO (ENSRFEG00010003793) #20	DNAH5 (ENSRFEG00010003650) #22	CTNND2 (ENSRFEG00010003516) #23	DAP (ENSRFEG00010003456) #24	ANKRD33B (ENSRFEG00010003433) #26	ROPN1L (ENSRFEG00010003413) #27	MARCHF6 (ENSRFEG00010003360) #28	CMBL (ENSRFEG00010003311) #29	CCT5 (ENSRFEG00010003237) #30	ATPSCKMT (ENSRFEG00010003174) #31	TAS2R1 (ENSRFEG00010003156) #32	SEMA5A (ENSRFEG00010003116) #33	MTRR (ENSRFEG00010003071)	FASTKD3 (ENSRFEG00010003029)	CFAP90 (ENSRFEG00010003003)	ADCY2 (ENSRFEG00010002967)	TENT4A (ENSRFEG00010002900)
Equus	ANCESTRAL SPECIES	23	ENSGT00940000154187.a.a ##7	ENSGT00940000154187.a.b #7	ENSGT00940000157512 #8	ENSGT00390000013228.e.b	ENSGT00730000111450 #10	ENSGT00940000155469 #12	ENSGT00940000160746 #13	ENSGT00390000018047 #14	ENSGT00940000160025 #15	ENSGT00940000158009 #16	ENSGT00390000012189 #17	ENSGT01090000260321	ENSGT00390000009802.b #18	ENSGT00390000009802.a #19	ENSGT00940000154766.a.a #20	ENSGT00940000155533.d #22	ENSGT00940000154952.a.b #23	ENSGT00940000154574.c #24	ENSGT00500000044852.a #26	ENSGT00390000012731.a.a #27	ENSGT00940000155171.a.b #28	ENSGT00390000000183 #29	ENSGT00550000074988 #30	ENSGT00390000014771.a #31	ENSGT01100000263477.E #32	ENSGT00940000158036 #33	ENSGT00940000155163.a.a	ENSGT00940000155822	ENSGT01030000234607.A.a.a.a	ENSGT00390000015121	ENSGT00940000156424
Donkey	MODERN SPECIES	1	CDH10 (ENSEASG00005007161) ##7	CDH12 (ENSEASG00005007168) #7	CDH18 (ENSEASG00005007180) #8	ENSEASG00005007184	BASP1 (ENSEASG00005026829) #10	MYO10 (ENSEASG00005007206) #12	RETREG1 (ENSEASG00005029345) #13	ZNF622 (ENSEASG00005007253) #14	ENSEASG00005033563	MARCHF11 (ENSEASG00005038351) #15	FBXL7 (ENSEASG00005038620) #16	ANKH (ENSEASG00005017738) #17	OTULIN (ENSEASG00005017769) #18	OTULINL (ENSEASG00005017778) #19	TRIO (ENSEASG00005017933) #20	DNAH5 (ENSEASG00005018225) #22	CTNND2 (ENSEASG00005018602) #23	DAP (ENSEASG00005037402) #24	ANKRD33B (ENSEASG00005033374) #26	ROPN1L (ENSEASG00005018599) #27	MARCHF6 (ENSEASG00005018598) #28	CMBL (ENSEASG00005018596) #29	CCT5 (ENSEASG00005018595) #30	ATPSCKMT (ENSEASG00005018594) #31	TAS2R1 (ENSEASG00005018593) #32	SEMA5A (ENSEASG00005018591) #33	ENSEASG00005026990	MTRR (ENSEASG00005018589)	FASTKD3 (ENSEASG00005018587)	CFAP90 (ENSEASG00005024888)	ADCY2 (ENSEASG00005018584)
Horse	MODERN SPECIES	13	CDH10 (ENSECAG00000004842) ##7	CDH12 (ENSECAG00000014223) #7	CDH18 (ENSECAG00000019320) #8	ENSECAG00000005030	BASP1 (ENSECAG00000040740) #10	MYO10 (ENSECAG00000007941) #12	RETREG1 (ENSECAG00000016899) #13	ZNF622 (ENSECAG00000020350) #14	MARCHF11 (ENSECAG00000024858) #15	FBXL7 (ENSECAG00000005529) #16	ANKH (ENSECAG00000006338) #17	OTULIN (ENSECAG00000016599) #18	ENSECAG00000057645	OTULINL (ENSECAG00000017059) #19	TRIO (ENSECAG00000019952) #20	DNAH5 (ENSECAG00000014954) #22	ENSECAG00000048274	CTNND2 (ENSECAG00000010901) #23	ENSECAG00000043848	DAP (ENSECAG00000031921) #24	ANKRD33B (ENSECAG00000033821) #26	ROPN1L (ENSECAG00000011750) #27	ENSECAG00000047348	MARCHF6 (ENSECAG00000012069) #28	CMBL (ENSECAG00000015898) #29	CCT5 (ENSECAG00000019192) #30	ATPSCKMT (ENSECAG00000013194) #31	TAS2R1 (ENSECAG00000005160) #32	SEMA5A (ENSECAG00000016241) #33	ENSECAG00000045308	ENSECAG00000048611
Carnivora	ANCESTRAL SPECIES	8	ENSGT00940000154187.a.b #7	ENSGT00940000157512 #8	ENSGT00940000159547.d	ENSGT00730000111450 #10	ENSGT00940000155469 #12	ENSGT00940000160746 #13	ENSGT00390000018047 #14	ENSGT00940000160025 #15	ENSGT00940000158009 #16	ENSGT00390000012189 #17	ENSGT01090000260321	ENSGT00390000009802.b #18	ENSGT00390000009802.a #19	ENSGT00940000166969.b	ENSGT00940000154766.a.a #20	ENSGT00940000155533.d #22	ENSGT00940000154952.a.b #23	ENSGT00940000154574.c #24	ENSGT00500000044852.a #26	ENSGT00390000012731.a.a #27	ENSGT00940000155171.a.b #28	ENSGT00940000155171.a.a ##28	ENSGT00390000000183 #29	ENSGT00550000074988 #30	ENSGT00390000014771.a #31	ENSGT00950000183210.d.a.c.a.a.a	ENSGT01100000263477.E #32	ENSGT00940000158036 #33	ENSGT00940000155822	ENSGT01030000234607.A.a.a.a	ENSGT00390000015121
Caniformia	ANCESTRAL SPECIES	5	ENSGT00940000154187.a.b #7	ENSGT00940000157512 #8	ENSGT00940000159547.d	ENSGT00730000111450 #10	ENSGT00940000155469 #12	ENSGT00940000160746 #13	ENSGT00390000018047 #14	ENSGT00940000160025 #15	ENSGT00940000158009 #16	ENSGT00390000012189 #17	ENSGT01090000260321	ENSGT00390000009802.b #18	ENSGT00390000009802.a #19	ENSGT00940000166969.b	ENSGT00940000154766.a.a #20	ENSGT00940000155533.d #22	ENSGT00940000154952.a.b #23	ENSGT00940000154574.c #24	ENSGT00500000044852.a #26	ENSGT00390000012731.a.a #27	ENSGT00940000155171.a.b #28	ENSGT00390000000183 #29	ENSGT00550000074988 #30	ENSGT00390000014771.a #31	ENSGT00950000183210.d.a.c.a.a.a	ENSGT01100000263477.E #32	ENSGT00940000158036 #33	ENSGT00940000155822	ENSGT01030000234607.A.a.a.a	ENSGT00390000015121	ENSGT00940000156424
Caniformia_b	ANCESTRAL SPECIES	4	ENSGT00940000154187.a.a ##7	ENSGT00940000154187.a.b #7	ENSGT00940000157512 #8	ENSGT00940000159547.d	ENSGT00730000111450.j #10	ENSGT00940000155469 #12	ENSGT00940000160746 #13	ENSGT00390000018047 #14	ENSGT00940000160025 #15	ENSGT00940000158009 #16	ENSGT00390000012189 #17	ENSGT01090000260321	ENSGT00390000009802.b #18	ENSGT00390000009802.a #19	ENSGT00940000154766.a.a #20	ENSGT00940000155533.d #22	ENSGT00940000154952.a.b #23	ENSGT00940000154574.c.d #24	ENSGT00500000044852.a #26	ENSGT00390000012731.a.a #27	ENSGT00940000155171.a.b #28	ENSGT00390000000183 #29	ENSGT00550000074988 #30	ENSGT00390000014771.a #31	ENSGT00950000183210.d.a.c.a.a.a	ENSGT01100000263477.E #32	ENSGT00940000158036 #33	ENSGT00940000155822	ENSGT01030000234607.A.a.a.a	ENSGT00390000015121	ENSGT00940000156424
Ursidae	ANCESTRAL SPECIES	24	ENSGT00940000154187.a.a.g ##7	ENSGT00940000154187.a.b #7	ENSGT00940000157512 #8	ENSGT00940000159547.d	ENSGT00730000111450.j #10	ENSGT00940000155469 #12	ENSGT00940000160746 #13	ENSGT00390000018047 #14	ENSGT00940000160025 #15	ENSGT00940000158009 #16	ENSGT00390000012189 #17	ENSGT01090000260321	ENSGT00390000009802.b #18	ENSGT00390000009802.a #19	ENSGT00940000154766.a.a.p #20	ENSGT00940000155533.d #22	ENSGT00940000154952.a.b #23	ENSGT00940000154574.c.d #24	ENSGT00500000044852.a #26	ENSGT00390000012731.a.a #27	ENSGT00940000155171.a.b #28	ENSGT00390000000183 #29	ENSGT00550000074988 #30	ENSGT00390000014771.a #31	ENSGT00950000183210.d.a.c.a.a.a	ENSGT01100000263477.E #32	ENSGT00940000158036 #33	ENSGT00940000155822	ENSGT01030000234607.A.a.a.a	ENSGT00390000015121	ENSGT00940000156424
Ursus	ANCESTRAL SPECIES	114					ENSGT00940000157512 #8	ENSGT00940000159547.d	ENSGT00940000155469 #12	ENSGT00940000160746 #13	ENSGT00390000018047 #14	ENSGT00940000158009 #16	ENSGT00390000012189 #17	ENSGT01090000260321	ENSGT00390000009802.b #18	ENSGT00390000009802.a #19	ENSGT00940000154766.a.a.p #20	ENSGT00940000155533.d #22	ENSGT00940000154952.a.b #23	ENSGT01090000260283	ENSGT00500000044852.a #26	ENSGT00390000012731.a.a #27	ENSGT00940000155171.a.b #28	ENSGT00390000000183 #29	ENSGT00550000074988 #30	ENSGT00390000014771.a #31	ENSGT01100000263477.E #32	ENSGT00940000158036 #33	ENSGT00940000155822	ENSGT01030000234607.A.a.a.a	ENSGT00390000015121	ENSGT00940000156424	ENSGT00940000157811
Polar bear	MODERN SPECIES	165		ENSUMAG00000021221	ENSUMAG00000021225	CDH18 (ENSUMAG00000021239) #8	ENSUMAG00000021260	MYO10 (ENSUMAG00000021360) #12	RETREG1 (ENSUMAG00000021712) #13	ZNF622 (ENSUMAG00000021715) #14	FBXL7 (ENSUMAG00000021723) #16	ENSUMAG00000021730	ANKH (ENSUMAG00000021732) #17	ENSUMAG00000021737	OTULIN (ENSUMAG00000021740) #18	OTULINL (ENSUMAG00000021747) #19	TRIO (ENSUMAG00000021795) #20	DNAH5 (ENSUMAG00000021992) #22	ENSUMAG00000021996 #23	ENSUMAG00000022008 #23	ENSUMAG00000022022	ENSUMAG00000022025 #26	ROPN1L (ENSUMAG00000022032) #27	MARCHF6 (ENSUMAG00000022100) #28	CMBL (ENSUMAG00000022374) #29	CCT5 (ENSUMAG00000022376) #30	ATPSCKMT (ENSUMAG00000022378) #31	TAS2R1 (ENSUMAG00000022381) #32	SEMA5A (ENSUMAG00000022395) #33	ENSUMAG00000022414	MTRR (ENSUMAG00000022419)	FASTKD3 (ENSUMAG00000022424)	CFAP90 (ENSUMAG00000022426)
American black bear	MODERN SPECIES	6872																ENSUAMG00000028302 #22
Giant Panda	MODERN SPECIES	13	CDH12 (ENSAMEG00000030530) #7	CDH18 (ENSAMEG00000007705) #8	ENSAMEG00000024937	ENSAMEG00000019207	ENSAMEG00000026804 #10	MYO10 (ENSAMEG00000015404) #12	RETREG1 (ENSAMEG00000026077) #13	ZNF622 (ENSAMEG00000015369) #14	MARCHF11 (ENSAMEG00000026687) #15	FBXL7 (ENSAMEG00000009793) #16	ANKH (ENSAMEG00000009745) #17	OTULIN (ENSAMEG00000009737) #18	ENSAMEG00000025544	OTULINL (ENSAMEG00000009720) #19	ENSAMEG00000009695 #20	DNAH5 (ENSAMEG00000009669) #22	CTNND2 (ENSAMEG00000013097) #23	DAP (ENSAMEG00000028019) #24	ANKRD33B (ENSAMEG00000025303) #26	ROPN1L (ENSAMEG00000003758) #27	MARCHF6 (ENSAMEG00000003768) #28	CMBL (ENSAMEG00000003820) #29	CCT5 (ENSAMEG00000003838) #30	ATPSCKMT (ENSAMEG00000003866) #31	ENSAMEG00000003878	TAS2R1 (ENSAMEG00000003883) #32	SEMA5A (ENSAMEG00000003884) #33	MTRR (ENSAMEG00000000762)	FASTKD3 (ENSAMEG00000000793)	ADCY2 (ENSAMEG00000028284)	ENSAMEG00000013734
Mustelinae	ANCESTRAL SPECIES	149			ENSGT00940000154673.b	ENSGT00940000157512 #8	ENSGT00940000159547.d	ENSGT00730000111450.j #10	ENSGT00940000155469 #12	ENSGT00940000160746 #13	ENSGT00390000018047 #14	ENSGT00940000160025 #15	ENSGT00940000158009 #16	ENSGT00390000012189 #17	ENSGT00390000009802.b #18	ENSGT00390000009802.a #19	ENSGT00940000154766.a.a #20	ENSGT00940000155533.d #22	ENSGT00940000154426.b.b.y.a.b	ENSGT00940000154952.a.b #23	ENSGT00940000154574.c.d #24	ENSGT00500000044852.a #26	ENSGT00390000012731.a.a #27	ENSGT00940000155171.a.b #28	ENSGT00390000000183 #29	ENSGT00550000074988 #30	ENSGT00390000014771.a #31	ENSGT01100000263477.E #32	ENSGT00940000158036 #33
American mink	MODERN SPECIES	312												ANKH (ENSNVIG00000010893) #17	OTULIN (ENSNVIG00000010887) #18	OTULINL (ENSNVIG00000010876) #19	TRIO (ENSNVIG00000010801) #20	DNAH5 (ENSNVIG00000010664) #22
Ferret	MODERN SPECIES	239		CDH18 (ENSMPUG00000010948) #8	ENSMPUG00000019939	BASP1 (ENSMPUG00000011070) #10	MYO10 (ENSMPUG00000011073) #12	RETREG1 (ENSMPUG00000011093) #13	ZNF622 (ENSMPUG00000011110) #14	ENSMPUG00000011113	MARCHF11 (ENSMPUG00000011114) #15	FBXL7 (ENSMPUG00000011123) #16	ANKH (ENSMPUG00000011126) #17	OTULIN (ENSMPUG00000011131) #18	ENSMPUG00000019940	OTULINL (ENSMPUG00000011140) #19	TRIO (ENSMPUG00000011143) #20	DNAH5 (ENSMPUG00000011161) #22	ENSMPUG00000011188	ENSMPUG00000011198 #23	CTNND2 (ENSMPUG00000011203) #23	ANKRD33B (ENSMPUG00000011211) #26	ENSMPUG00000011222	ROPN1L (ENSMPUG00000011224) #27	MARCHF6 (ENSMPUG00000011228) #28	CMBL (ENSMPUG00000011238) #29	CCT5 (ENSMPUG00000011256) #30	ATPSCKMT (ENSMPUG00000011261) #31	SEMA5A (ENSMPUG00000011293) #33
Canidae	ANCESTRAL SPECIES	62												ENSGT00390000009802.b #18	ENSGT00390000009802.a #19	ENSGT00940000166969.b	ENSGT00940000154766.a.a #20	ENSGT00940000155533.d #22	ENSGT00940000154952.a.b #23	ENSGT00940000154574.c #24	ENSGT00500000044852.a #26	ENSGT00390000012731.a.a #27	ENSGT00940000155171.a.b #28	ENSGT00390000000183 #29	ENSGT00550000074988 #30	ENSGT00390000014771.a #31	ENSGT01100000263477.E #32	ENSGT00940000158036 #33	ENSGT00940000155822	ENSGT01030000234607.A.a.a.a	ENSGT00390000015121	ENSGT00940000156424	ENSGT00940000157811
Canis_lupus	ANCESTRAL SPECIES	49												ENSGT00390000009802.b #18	ENSGT00390000009802.a #19	ENSGT00940000166969.b	ENSGT00940000154766.a.a #20	ENSGT00940000155533.d #22	ENSGT00940000154952.a.b #23	ENSGT00940000154574.c #24	ENSGT00500000044852.a #26	ENSGT00390000012731.a.a #27	ENSGT00940000155171.a.b #28	ENSGT00390000000183 #29	ENSGT00550000074988 #30	ENSGT00390000014771.a #31	ENSGT00940000153052.c.b.a.a.a.a.b.j.b	ENSGT01100000263477.E #32	ENSGT00940000158036 #33	ENSGT00940000155822	ENSGT01030000234607.A.a.a.a	ENSGT00390000015121	ENSGT00940000156424
Dingo	MODERN SPECIES	159											ENSCAFG00020022335	ENSCAFG00020022336 #18	OTULINL (ENSCAFG00020022340) #19	TRIO (ENSCAFG00020022372) #20	ENSCAFG00020022465	DNAH5 (ENSCAFG00020022467) #22	ENSCAFG00020022470	ENSCAFG00020022471	ENSCAFG00020022472 #23	CTNND2 (ENSCAFG00020022473) #23	DAP (ENSCAFG00020022476) #24	ANKRD33B (ENSCAFG00020022477) #26	ROPN1L (ENSCAFG00020022479) #27	MARCHF6 (ENSCAFG00020022480) #28	ENSCAFG00020022481	ENSCAFG00020022482 ##28	CMBL (ENSCAFG00020022483) #29	CCT5 (ENSCAFG00020022484) #30	ATPSCKMT (ENSCAFG00020022486) #31	ENSCAFG00020022491	TAS2R1 (ENSCAFG00020022493) #32
Dog	MODERN SPECIES	27									ENSCAFG00845030917	ENSCAFG00845014823	OTULIN (ENSCAFG00845014835) #18	OTULINL (ENSCAFG00845014899) #19	TRIO (ENSCAFG00845014922)	TRIO (ENSCAFG00845014950) #20	ENSCAFG00845015335 #20	DNAH5 (ENSCAFG00845017070) #22	ENSCAFG00845020338	CTNND2 (ENSCAFG00845020488) #23	DAP (ENSCAFG00845021036) #24	ANKRD33B (ENSCAFG00845021111) #26	ROPN1L (ENSCAFG00845021182) #27	MARCHF6 (ENSCAFG00845021339) #28	ENSCAFG00845021651	CMBL (ENSCAFG00845021687) #29	CCT5 (ENSCAFG00845021786) #30	ATPSCKMT (ENSCAFG00845021964) #31	ENSCAFG00845022120	TAS2R1 (ENSCAFG00845022145) #32	SEMA5A (ENSCAFG00845022219) #33	MTRR (ENSCAFG00845022722)	FASTKD3 (ENSCAFG00845022802)
Red fox	MODERN SPECIES	205											OTULIN (ENSVVUG00000006496) #18	OTULINL (ENSVVUG00000006432) #19	ENSVVUG00000006412	ENSVVUG00000006400	TRIO (ENSVVUG00000004613) #20	DNAH5 (ENSVVUG00000003102) #22
Felidae	ANCESTRAL SPECIES	6	ENSGT00940000154187.a.b #7	ENSGT00940000157512 #8	ENSGT00940000159547.d	ENSGT00730000111450 #10	ENSGT00940000155469 #12	ENSGT00940000160746 #13	ENSGT00390000018047 #14	ENSGT00940000160025 #15	ENSGT00940000158009 #16	ENSGT00390000012189 #17	ENSGT00390000009802.b #18	ENSGT00390000009802.a #19	ENSGT00940000154766.a.a.r #20	ENSGT00940000166969.b	ENSGT00940000154766.a.a.q #20	ENSGT00940000155533.d #22	ENSGT00940000154952.a.b #23	ENSGT00940000154574.c #24	ENSGT00500000044852.a #26	ENSGT00390000012731.a.a #27	ENSGT00940000155171.a.b #28	ENSGT00940000155171.a.a ##28	ENSGT00390000000183 #29	ENSGT00550000074988 #30	ENSGT00390000014771.a #31	ENSGT00950000183210.d.a.c.a.a.a	ENSGT01100000263477.E #32	ENSGT00940000158036 #33	ENSGT00940000155822	ENSGT01030000234607.A.a.a.a	ENSGT00390000015121
Panthera	ANCESTRAL SPECIES	6	ENSGT00940000154187.a.a ##7	ENSGT00940000154187.a.b #7	ENSGT00940000157512 #8	ENSGT00940000159547.d	ENSGT00730000111450 #10	ENSGT00940000155469 #12	ENSGT00940000160746 #13	ENSGT00390000018047 #14	ENSGT00940000160025 #15	ENSGT00940000158009 #16	ENSGT00390000012189 #17	ENSGT00390000009802.b #18	ENSGT00390000009802.a #19	ENSGT00940000166969.b	ENSGT00940000154766.a.a.q #20	ENSGT00940000155533.d #22	ENSGT00940000154952.a.b #23	ENSGT00940000154574.c #24	ENSGT00500000044852.a #26	ENSGT00390000012731.a.a #27	ENSGT00940000155171.a.b #28	ENSGT00940000155171.a.a ##28	ENSGT00390000000183 #29	ENSGT00550000074988 #30	ENSGT00390000014771.a #31	ENSGT00950000183210.d.a.c.a.a.a	ENSGT01100000263477.E #32	ENSGT00940000158036 #33	ENSGT00940000155822	ENSGT01030000234607.A.a.a.a	ENSGT00390000015121
Panthera_a	ANCESTRAL SPECIES	3	ENSGT00940000154187.a.b #7	ENSGT00940000157512 #8	ENSGT00940000159547.d	ENSGT00730000111450 #10	ENSGT00940000155469 #12	ENSGT00940000160746 #13	ENSGT00390000018047 #14	ENSGT00940000160025 #15	ENSGT00940000158009 #16	ENSGT00390000012189 #17	ENSGT00390000009802.b #18	ENSGT00390000009802.a #19	ENSGT00940000154766.a.a.q #20	ENSGT00940000166969.b	ENSGT00940000154766.a.a.r #20	ENSGT00940000155533.d #22	ENSGT00940000154952.a.b #23	ENSGT00940000154574.c #24	ENSGT00500000044852.a #26	ENSGT00390000012731.a.a #27	ENSGT00940000155171.a.b #28	ENSGT00390000000183 #29	ENSGT00550000074988 #30	ENSGT00390000014771.a #31	ENSGT00950000183210.d.a.c.a.a.a	ENSGT01100000263477.E #32	ENSGT00940000158036 #33	ENSGT00940000155822	ENSGT01030000234607.A.a.a.a	ENSGT00390000015121	ENSGT00940000156424
lion	MODERN SPECIES		CDH9 (ENSPLOG00000014486)	CDH10 (ENSPLOG00000014378) ##7	CDH12 (ENSPLOG00000014183) #7	CDH18 (ENSPLOG00000013887) #8	ENSPLOG00000013827	ENSPLOG00000013785 #10	MYO10 (ENSPLOG00000013576) #12	RETREG1 (ENSPLOG00000013464) #13	ZNF622 (ENSPLOG00000013434) #14	MARCHF11 (ENSPLOG00000013400) #15	FBXL7 (ENSPLOG00000013347) #16	ANKH (ENSPLOG00000013310) #17	OTULIN (ENSPLOG00000013270) #18	OTULINL (ENSPLOG00000013236) #19	TRIO (ENSPLOG00000012691) #20	DNAH5 (ENSPLOG00000011942) #22	CTNND2 (ENSPLOG00000011401) #23	ENSPLOG00000011345 #24	ANKRD33B (ENSPLOG00000011323) #26	ROPN1L (ENSPLOG00000011281) #27	MARCHF6 (ENSPLOG00000010780) #28	CMBL (ENSPLOG00000010689) #29	CCT5 (ENSPLOG00000010569) #30	ATPSCKMT (ENSPLOG00000010468) #31	ENSPLOG00000010455	TAS2R1 (ENSPLOG00000010440) #32	SEMA5A (ENSPLOG00000010322) #33	MTRR (ENSPLOG00000010289)	FASTKD3 (ENSPLOG00000004196)	CFAP90 (ENSPLOG00000004188)	ADCY2 (ENSPLOG00000004170)
leopard	MODERN SPECIES	19	CDH18 (ENSPPRG00000015628) #8	ENSPPRG00000012964	ENSPPRG00000012741	BASP1 (ENSPPRG00000016134) #10	MYO10 (ENSPPRG00000012166) #12	RETREG1 (ENSPPRG00000008874) #13	ENSPPRG00000008393 #14	ENSPPRG00000008274 #14	MARCHF11 (ENSPPRG00000008162) #15	FBXL7 (ENSPPRG00000008025) #16	ANKH (ENSPPRG00000007398) #17	OTULIN (ENSPPRG00000007038) #18	OTULINL (ENSPPRG00000006096) #19	ENSPPRG00000005790	ENSPPRG00000005068 #20	DNAH5 (ENSPPRG00000003569) #22	CTNND2 (ENSPPRG00000000905) #23	DAP (ENSPPRG00000013275) #24	ANKRD33B (ENSPPRG00000013078) #26	ROPN1L (ENSPPRG00000013036) #27	MARCHF6 (ENSPPRG00000012698) #28	CMBL (ENSPPRG00000006791) #29	CCT5 (ENSPPRG00000006386) #30	ATPSCKMT (ENSPPRG00000005698) #31	TAS2R1 (ENSPPRG00000014981) #32	SEMA5A (ENSPPRG00000005014) #33	MTRR (ENSPPRG00000004545)	FASTKD3 (ENSPPRG00000004141)	CFAP90 (ENSPPRG00000003784)	ADCY2 (ENSPPRG00000003380)	TENT4A (ENSPPRG00000002409)
Tiger	MODERN SPECIES	399	CDH18 (ENSPTIG00000010486) #8	ENSPTIG00000008162	ENSPTIG00000010201	MYO10 (ENSPTIG00000009835) #12	RETREG1 (ENSPTIG00000009754) #13	ZNF622 (ENSPTIG00000009603) #14	MARCHF11 (ENSPTIG00000009585) #15	FBXL7 (ENSPTIG00000009515) #16	ENSPTIG00000008154	ANKH (ENSPTIG00000009437) #17	OTULIN (ENSPTIG00000009407) #18	OTULINL (ENSPTIG00000009360) #19	ENSPTIG00000009309	ENSPTIG00000009248 #20	ENSPTIG00000009184 #20	DNAH5 (ENSPTIG00000007989) #22
Cat	MODERN SPECIES		CDH10 (ENSFCAG00000027287) ##7	CDH12 (ENSFCAG00000007961) #7	CDH18 (ENSFCAG00000013641) #8	ENSFCAG00000042777 #10	MYO10 (ENSFCAG00000010325) #12	RETREG1 (ENSFCAG00000041849) #13	ZNF622 (ENSFCAG00000018947) #14	MARCHF11 (ENSFCAG00000005741) #15	FBXL7 (ENSFCAG00000030930) #16	ANKH (ENSFCAG00000012251) #17	OTULIN (ENSFCAG00000006066) #18	OTULINL (ENSFCAG00000026260) #19	ENSFCAG00000052934 #20	ENSFCAG00000043724	ENSFCAG00000046989 #20	DNAH5 (ENSFCAG00000015341) #22	CTNND2 (ENSFCAG00000002522) #23	ENSFCAG00000034118 #24	ANKRD33B (ENSFCAG00000009294) #26	ROPN1L (ENSFCAG00000003135) #27	MARCHF6 (ENSFCAG00000003132) #28	CMBL (ENSFCAG00000028005) #29	CCT5 (ENSFCAG00000003129) #30	ATPSCKMT (ENSFCAG00000027158) #31	ENSFCAG00000048844	TAS2R1 (ENSFCAG00000012611) #32	SEMA5A (ENSFCAG00000012608) #33	MTRR (ENSFCAG00000015105)	FASTKD3 (ENSFCAG00000015104)	CFAP90 (ENSFCAG00000019341)	ADCY2 (ENSFCAG00000015101)
Eulipotyphla	ANCESTRAL SPECIES																	ENSGT00940000155533.d #22
Common shrew	MODERN SPECIES	1989																DNAH5 (ENSSARG00000000221) #22
Hedgehog	MODERN SPECIES	2568																DNAH5 (ENSEEUG00000014663) #22
Atlantogenata	ANCESTRAL SPECIES		ENSGT00940000154673.a	ENSGT00940000160496.b	ENSGT00940000154187.a.a ##7	ENSGT00940000154187.a.b #7	ENSGT00940000157512 #8	ENSGT00730000111450 #10	ENSGT00940000155469 #12	ENSGT00940000160746 #13	ENSGT00390000018047 #14	ENSGT00940000160025 #15	ENSGT00940000158009 #16	ENSGT00390000012189 #17	ENSGT00390000009802.b #18	ENSGT00390000009802.a #19	ENSGT00940000154766.a.a #20	ENSGT00940000155533.d #22	ENSGT00940000154952.a.b #23	ENSGT00940000154574.c #24	ENSGT00500000044852.a #26	ENSGT00390000012731.a.a #27	ENSGT00940000155171.a.b #28	ENSGT00390000000183 #29	ENSGT00550000074988 #30	ENSGT00390000014771.a #31	ENSGT00940000158036 #33	ENSGT00940000155822	ENSGT01030000234607.A.a.a.a	ENSGT00390000015121	ENSGT00940000156424	ENSGT00940000157811	ENSGT00950000182886.b.b
Afrotheria	ANCESTRAL SPECIES	12	ENSGT00730000111052	ENSGT00940000154673.a	ENSGT00940000160496.b	ENSGT00940000154187.a.a ##7	ENSGT00940000154187.a.b #7	ENSGT00940000157512 #8	ENSGT00940000155469 #12	ENSGT00940000160746 #13	ENSGT00390000018047 #14	ENSGT00940000160025 #15	ENSGT00940000158009 #16	ENSGT00390000012189 #17	ENSGT00390000009802.b #18	ENSGT00390000009802.a #19	ENSGT00940000154766.a.a #20	ENSGT00940000155533.d #22	ENSGT00940000154952.a.b #23	ENSGT00940000154574.c #24	ENSGT00500000044852.a #26
Afrotheria_a	ANCESTRAL SPECIES	12	ENSGT00730000111052	ENSGT00940000154673.a	ENSGT00940000160496.b	ENSGT00940000154187.a.a ##7	ENSGT00940000154187.a.b #7	ENSGT00940000157512 #8	ENSGT00940000155469 #12	ENSGT00940000160746 #13	ENSGT00390000018047 #14	ENSGT00940000160025 #15	ENSGT00940000158009 #16	ENSGT00390000012189 #17	ENSGT00390000009802.b #18	ENSGT00390000009802.a #19	ENSGT00940000154766.a.a #20	ENSGT00940000155533.d #22	ENSGT00940000154952.a.b #23	ENSGT00940000154574.c #24	ENSGT00500000044852.a #26
Elephant	MODERN SPECIES	526	DROSHA (ENSLAFG00000013831)	CDH6 (ENSLAFG00000007375)	CDH9 (ENSLAFG00000018440)	CDH10 (ENSLAFG00000008284) ##7	CDH12 (ENSLAFG00000017027) #7	ENSLAFG00000003845 #8	MYO10 (ENSLAFG00000004123) #12	RETREG1 (ENSLAFG00000018195) #13	ZNF622 (ENSLAFG00000031794) #14	ENSLAFG00000006191 #15	FBXL7 (ENSLAFG00000013099) #16	ANKH (ENSLAFG00000002813) #17	OTULIN (ENSLAFG00000025751) #18	OTULINL (ENSLAFG00000011190) #19	TRIO (ENSLAFG00000007860) #20	DNAH5 (ENSLAFG00000012310) #22	CTNND2 (ENSLAFG00000007728) #23	DAP (ENSLAFG00000011209) #24	ANKRD33B (ENSLAFG00000011206) #26	ENSLAFG00000029202	SLC6A19 (ENSLAFG00000005422)	SLC6A18 (ENSLAFG00000006023)	TERT (ENSLAFG00000013077)	CLPTM1L (ENSLAFG00000012245)	SLC6A3 (ENSLAFG00000003040)	ENSLAFG00000011431	ENSLAFG00000005707	ENSLAFG00000005708	IRX4 (ENSLAFG00000000460)	IRX2 (ENSLAFG00000031893)	IRX1 (ENSLAFG00000012017)
Hyrax	MODERN SPECIES	2133																DNAH5 (ENSPCAG00000014559) #22
Tenrec	MODERN SPECIES	2257																DNAH5 (ENSETEG00000017841) #22
Xenarthra	ANCESTRAL SPECIES																	ENSGT00940000155533.d #22
Sloth	MODERN SPECIES	2357																DNAH5 (ENSCHOG00000004615) #22
Marsupialia	ANCESTRAL SPECIES	1	ENSGT00940000154187.a.a ##7	ENSGT00940000154187.a.b #7	ENSGT00940000157512 #8	ENSGT00730000111450 #10	ENSGT00940000155469 #12	ENSGT00940000160746 #13	ENSGT00390000018047 #14	ENSGT00940000160025 #15	ENSGT00940000158009 #16	ENSGT00390000012189 #17	ENSGT00390000009802.b #18	ENSGT00390000009802.a #19	ENSGT00940000154766.a.a.a.a #20	ENSGT00940000166969.b	ENSGT00940000154766.a.a.b #20	ENSGT00940000155533.d #22	ENSGT00950000185637	ENSGT00940000154952.a.b #23	ENSGT00940000154574.c #24	ENSGT00500000044852.a #26	ENSGT00390000012731.a.a #27	ENSGT00940000155171.a.b #28	ENSGT00390000000183 #29	ENSGT00550000074988 #30	ENSGT00390000014771.a #31	ENSGT01100000263477.E #32	ENSGT00940000158036 #33	ENSGT00940000155584.db	ENSGT00940000155822	ENSGT01030000234607.A.a.a.a	ENSGT00390000015121
Marsupialia_b	ANCESTRAL SPECIES	2	ENSGT00940000154187.a.a ##7	ENSGT00940000154187.a.b #7	ENSGT00940000157512 #8	ENSGT00730000111450 #10	ENSGT00940000155469 #12	ENSGT00940000160746 #13	ENSGT00390000018047 #14	ENSGT00940000160025 #15	ENSGT00940000158009 #16	ENSGT00390000012189 #17	ENSGT00390000009802.b #18	ENSGT00390000009802.a #19	ENSGT00940000154766.a.a.a.a #20	ENSGT00940000166969.b	ENSGT00940000154766.a.a.b #20	ENSGT00940000155533.d #22	ENSGT00940000154952.a.b #23	ENSGT00940000154574.c #24	ENSGT00500000044852.a #26	ENSGT00390000012731.a.a #27	ENSGT00940000155171.a.b #28	ENSGT00390000000183 #29	ENSGT00550000074988 #30	ENSGT00390000014771.a #31	ENSGT01100000263477.E #32	ENSGT00940000158036 #33	ENSGT00940000155584.db	ENSGT00940000155822	ENSGT01030000234607.A.a.a.a	ENSGT00390000015121	ENSGT00940000156424
Diprotodontia	ANCESTRAL SPECIES	1	ENSGT00940000154673.a	ENSGT00940000160496.b	ENSGT00940000154187.a.a ##7	ENSGT00940000154187.a.b #7	ENSGT00730000111450 #10	ENSGT00940000155469 #12	ENSGT00940000160746 #13	ENSGT00390000018047 #14	ENSGT00940000160025 #15	ENSGT00940000158009 #16	ENSGT00390000012189 #17	ENSGT00390000009802.b #18	ENSGT00390000009802.a #19	ENSGT00940000166969.b	ENSGT00940000154766.a.a.b #20	ENSGT00940000155533.d #22	ENSGT00940000154952.a.b #23	ENSGT00940000154574.c #24	ENSGT00500000044852.a #26	ENSGT00390000012731.a.a #27	ENSGT00940000155171.a.b #28	ENSGT00390000000183 #29	ENSGT00550000074988 #30	ENSGT00390000014771.a #31	ENSGT01100000263477.E #32	ENSGT00940000158036 #33	ENSGT00940000155822	ENSGT01030000234607.A.a.a.a	ENSGT00390000015121	ENSGT00940000156424	ENSGT00940000157811
Diprotodontia_a	ANCESTRAL SPECIES		ENSGT00390000009405.e.a.b	ENSGT00940000160496.b	ENSGT00940000154187.a.a ##7	ENSGT00940000154187.a.b #7	ENSGT00730000111450.b #10	ENSGT00940000155469 #12	ENSGT00940000160746 #13	ENSGT00390000018047 #14	ENSGT00940000160025 #15	ENSGT00940000158009 #16	ENSGT00390000012189 #17	ENSGT00390000009802.b #18	ENSGT00390000009802.a #19	ENSGT00940000166969.b	ENSGT00940000154766.a.a.b #20	ENSGT00940000155533.d #22	ENSGT00940000154952.a.b #23	ENSGT00940000154574.c #24	ENSGT00500000044852.a #26	ENSGT00390000012731.a.a #27	ENSGT00940000155171.a.b #28	ENSGT00390000000183 #29	ENSGT00550000074988 #30	ENSGT00390000014771.a #31	ENSGT01100000263477.E #32	ENSGT00940000158036 #33	ENSGT00940000155822	ENSGT01030000234607.A.a.a.a	ENSGT00390000015121	ENSGT00940000156424	ENSGT00940000157811
Common wonbat	MODERN SPECIES	1028	CDH18 (ENSVURG00010021029) #8	ENSVURG00010021059	ENSVURG00010021063	ENSVURG00010021066	ENSVURG00010021069 #10	MYO10 (ENSVURG00010021079) #12	RETREG1 (ENSVURG00010021092) #13	ZNF622 (ENSVURG00010021097) #14	MARCHF11 (ENSVURG00010021104) #15	FBXL7 (ENSVURG00010021107) #16	ENSVURG00010021114	ANKH (ENSVURG00010021123) #17	OTULIN (ENSVURG00010021135) #18	OTULINL (ENSVURG00010021137) #19	TRIO (ENSVURG00010021149) #20	DNAH5 (ENSVURG00010021185) #22	ENSVURG00010021225	ENSVURG00010021228	ENSVURG00010021256	ENSVURG00010021260	ENSVURG00010021266 #23	DAP (ENSVURG00010021276) #24	ANKRD33B (ENSVURG00010021286) #26	ROPN1L (ENSVURG00010021288) #27	MARCHF6 (ENSVURG00010021297) #28	CMBL (ENSVURG00010021313) #29	CCT5 (ENSVURG00010021320) #30	ATPSCKMT (ENSVURG00010021339) #31	ENSVURG00010021349 #32	ENSVURG00010021351 #32	SEMA5A (ENSVURG00010021360) #33
koala	MODERN SPECIES	131	ENSPCIG00000006733	ENSPCIG00000027069	ENSPCIG00000027066 #10	MYO10 (ENSPCIG00000027061) #12	RETREG1 (ENSPCIG00000025061) #13	ZNF622 (ENSPCIG00000025058) #14	MARCHF11 (ENSPCIG00000003964) #15	FBXL7 (ENSPCIG00000004033) #16	ENSPCIG00000024000	ANKH (ENSPCIG00000024004) #17	OTULIN (ENSPCIG00000014035) #18	OTULINL (ENSPCIG00000014039) #19	ENSPCIG00000031853	ENSPCIG00000014044 #20	ENSPCIG00000002846 #20	DNAH5 (ENSPCIG00000024266) #22	ENSPCIG00000026022	ENSPCIG00000026023
Wallaby	MODERN SPECIES	3626																DNAH5 (ENSMEUG00000013897) #22
Tasmanian devil	MODERN SPECIES		ENSSHAG00000032124	ENSSHAG00000027970	CDH18 (ENSSHAG00000007404) #8	ENSSHAG00000025423	BASP1 (ENSSHAG00000024924) #10	ENSSHAG00000007802	RETREG1 (ENSSHAG00000005315) #13	ZNF622 (ENSSHAG00000004315) #14	MARCHF11 (ENSSHAG00000025647) #15	FBXL7 (ENSSHAG00000010989) #16	ANKH (ENSSHAG00000011934) #17	OTULIN (ENSSHAG00000011460) #18	OTULINL (ENSSHAG00000011137) #19	ENSSHAG00000008840 #20	ENSSHAG00000032390 #20	DNAH5 (ENSSHAG00000006224) #22	ENSSHAG00000020832	CTNND2 (ENSSHAG00000026816) #23	DAP (ENSSHAG00000029014) #24	ANKRD33B (ENSSHAG00000025830) #26	MARCHF6 (ENSSHAG00000000452) #28	ENSSHAG00000030222	ENSSHAG00000029153 ##28	CMBL (ENSSHAG00000027779) #29	ENSSHAG00000025425 #30	ATPSCKMT (ENSSHAG00000031295) #31	ENSSHAG00000030169 #32	SEMA5A (ENSSHAG00000025721) #33	ENSSHAG00000004959	MTRR (ENSSHAG00000006711)	FASTKD3 (ENSSHAG00000006423)
Opossum	MODERN SPECIES	2	ENSMODG00000003590	ENSMODG00000003560 #10	MYO10 (ENSMODG00000003552) #12	RETREG1 (ENSMODG00000038378) #13	ZNF622 (ENSMODG00000003459) #14	ENSMODG00000037624	MARCHF11 (ENSMODG00000003445) #15	FBXL7 (ENSMODG00000003438) #16	ENSMODG00000029539	ENSMODG00000036561	ANKH (ENSMODG00000002970) #17	OTULIN (ENSMODG00000002941) #18	OTULINL (ENSMODG00000002927) #19	ENSMODG00000039565 #20	ENSMODG00000002909 #20	DNAH5 (ENSMODG00000002817) #22	ENSMODG00000049658	ENSMODG00000017321	ENSMODG00000036425	CTNND2 (ENSMODG00000002489) #23	ENSMODG00000045468	ENSMODG00000002471	ENSMODG00000025607 #24	ANKRD33B (ENSMODG00000002457) #26	ROPN1L (ENSMODG00000002454) #27	MARCHF6 (ENSMODG00000002440) #28	CMBL (ENSMODG00000002371) #29	CCT5 (ENSMODG00000002356) #30	ATPSCKMT (ENSMODG00000002341) #31	ENSMODG00000002337	ENSMODG00000045390
Platypus	MODERN SPECIES	86	CDH6 (ENSOANG00000015746)	CDH9 (ENSOANG00000002505)	CDH10 (ENSOANG00000002504) ##7	CDH12 (ENSOANG00000002500) #7	CDH18 (ENSOANG00000002498) #8	BASP1 (ENSOANG00000041988) #10	MYO10 (ENSOANG00000009146) #12	RETREG1 (ENSOANG00000009147) #13	ZNF622 (ENSOANG00000021071) #14	MARCHF11 (ENSOANG00000009145) #15	FBXL7 (ENSOANG00000036368) #16	ANKH (ENSOANG00000011616) #17	OTULIN (ENSOANG00000011614) #18	OTULINL (ENSOANG00000011613) #19	TRIO (ENSOANG00000011610) #20	DNAH5 (ENSOANG00000011603) #22	CTNND2 (ENSOANG00000011600) #23	DAP (ENSOANG00000011599) #24	ENSOANG00000011598 #26	ROPN1L (ENSOANG00000011597) #27	MARCHF6 (ENSOANG00000011595) #28	CMBL (ENSOANG00000011594) #29	CCT5 (ENSOANG00000011592) #30	ATPSCKMT (ENSOANG00000011590) #31	SEMA5A (ENSOANG00000011586) #33	MTRR (ENSOANG00000011583)	C5orf49 (ENSOANG00000036348)	ADCY2 (ENSOANG00000011580)	TENT4A (ENSOANG00000011579)	SRD5A1 (ENSOANG00000041870)	NSUN2 (ENSOANG00000009243)
Sauria	ANCESTRAL SPECIES		ENSGT00940000154673.b	ENSGT00940000154187.a.b #7	ENSGT00940000157512 #8	ENSGT00730000111450 #10	ENSGT00940000155469 #12	ENSGT00940000160746 #13	ENSGT00390000018047 #14	ENSGT00940000160025 #15	ENSGT00940000158009 #16	ENSGT00390000012189 #17	ENSGT01090000260321	ENSGT00390000009802.b #18	ENSGT00390000009802.a #19	ENSGT00940000166969.b	ENSGT00940000154766.a.a #20	ENSGT00940000155533.d #22	ENSGT00940000154952.a.b #23	ENSGT00940000154574.c #24	ENSGT00500000044852.a #26	ENSGT00390000004886	ENSGT00390000012731.a.a #27	ENSGT00940000155171.a.b #28	ENSGT00940000155171.a.a ##28	ENSGT00390000000183.g.b #29	ENSGT00390000000183.g.a #29	ENSGT00550000074988 #30	ENSGT00390000014771.a #31	ENSGT01030000235349	ENSGT00940000158036 #33	ENSGT00940000155822	ENSGT01030000234607.A.a.a.a
Archelosauria	ANCESTRAL SPECIES	5	ENSGT00940000154187.a.a ##7	ENSGT00940000154187.a.b #7	ENSGT00940000157512 #8	ENSGT00730000111450 #10	ENSGT00940000155469 #12	ENSGT00940000160746 #13	ENSGT00390000018047 #14	ENSGT00940000160025 #15	ENSGT00940000158009 #16	ENSGT00390000012189 #17	ENSGT01090000260321	ENSGT00390000009802.b #18	ENSGT00390000009802.a #19	ENSGT00940000166969.b	ENSGT00940000154766.a.a #20	ENSGT00940000155533.d #22	ENSGT00940000154952.a.b #23	ENSGT00940000154574.c #24	ENSGT00500000044852.a #26	ENSGT00390000004886	ENSGT00390000012731.a.a #27	ENSGT00940000155171.a.b #28	ENSGT00940000155171.a.a ##28	ENSGT00390000000183.g.b #29	ENSGT00390000000183.g.a #29	ENSGT00940000161663	ENSGT00550000074988 #30	ENSGT00390000014771.a #31	ENSGT00940000158036 #33	ENSGT00940000155822	ENSGT01030000234607.A.a.a.a
Archosauria	ANCESTRAL SPECIES		ENSGT00940000154187.a.a ##7	ENSGT00940000154187.a.b #7	ENSGT00940000157512 #8	ENSGT00730000111450 #10	ENSGT00940000155469 #12	ENSGT00940000160746 #13	ENSGT00390000018047 #14	ENSGT00940000160025 #15	ENSGT00940000158009 #16	ENSGT00390000012189 #17	ENSGT01090000260321	ENSGT00390000009802.b #18	ENSGT00390000009802.a #19	ENSGT00940000166969.b	ENSGT00940000154766.a.a #20	ENSGT00940000155533.d #22	ENSGT00940000154952.a.b #23	ENSGT00940000154574.c #24	ENSGT00500000044852.a #26	ENSGT00390000004886	ENSGT00390000012731.a.a #27	ENSGT00940000155171.a.b #28	ENSGT00940000155171.a.a ##28	ENSGT00390000000183.g.b #29	ENSGT00390000000183.g.a #29	ENSGT00940000161663	ENSGT00550000074988 #30	ENSGT00390000014771.a #31	ENSGT00940000158036 #33	ENSGT00940000155822	ENSGT01030000234607.A.a.a.a
Aves	ANCESTRAL SPECIES	24	ENSGT00940000154187.a.a ##7	ENSGT00940000154187.a.b #7	ENSGT00940000157512 #8	ENSGT00730000111450 #10	ENSGT00940000155469 #12	ENSGT00940000160746 #13	ENSGT00390000018047 #14	ENSGT00940000160025 #15	ENSGT00940000158009 #16	ENSGT00390000012189 #17	ENSGT01090000260321	ENSGT00390000009802.b #18	ENSGT00390000009802.a #19	ENSGT00940000166969.b	ENSGT00940000154766.a.a #20	ENSGT00940000155533.d #22	ENSGT00940000154952.a.b #23	ENSGT00940000154574.c #24	ENSGT00500000044852.a #26	ENSGT00390000004886	ENSGT00390000012731.a.a #27	ENSGT00940000155171.a.b #28	ENSGT00940000155171.a.a ##28	ENSGT00390000000183.g.b #29	ENSGT00390000000183.g.a #29	ENSGT00940000161663	ENSGT00550000074988 #30	ENSGT00390000014771.a #31	ENSGT00940000158036 #33	ENSGT00940000155822	ENSGT01030000234607.A.a.a.a
Neognathae	ANCESTRAL SPECIES		ENSGT00940000154187.a.a ##7	ENSGT00940000154187.a.b #7	ENSGT00940000157512 #8	ENSGT00730000111450 #10	ENSGT00940000155469 #12	ENSGT00940000160746 #13	ENSGT00390000018047 #14	ENSGT00940000160025 #15	ENSGT00940000158009 #16	ENSGT00390000012189 #17	ENSGT01090000260321	ENSGT00390000009802.b #18	ENSGT00390000009802.a #19	ENSGT00940000166969.b	ENSGT00940000154766.a.a #20	ENSGT00940000155533.d #22	ENSGT00940000154952.a.b #23	ENSGT00940000154574.c #24	ENSGT00500000044852.a #26	ENSGT00390000004886	ENSGT00390000012731.a.a #27	ENSGT00940000155171.a.b #28	ENSGT00940000155171.a.a ##28	ENSGT00390000000183.g.b #29	ENSGT00390000000183.g.a #29	ENSGT00940000161663	ENSGT00550000074988 #30	ENSGT00390000014771.a #31	ENSGT00940000158036 #33	ENSGT00940000155822	ENSGT01030000234607.A.a.a.a
Galloanserae	ANCESTRAL SPECIES		ENSGT00940000160496.b	ENSGT00940000154187.a.a ##7	ENSGT00940000154187.a.b #7	ENSGT00940000157512 #8	ENSGT00730000111450 #10	ENSGT00940000155469 #12	ENSGT00940000160746 #13	ENSGT00390000018047 #14	ENSGT00940000160025 #15	ENSGT00940000158009 #16	ENSGT00390000012189 #17	ENSGT00390000009802.b #18	ENSGT00390000009802.a #19	ENSGT00940000166969.b	ENSGT00940000154766.a.a #20	ENSGT00940000155533.d #22	ENSGT00940000154952.a.b #23	ENSGT00940000154574.c #24	ENSGT00500000044852.a #26	ENSGT00390000004886	ENSGT00390000012731.a.a #27	ENSGT00940000155171.a.b #28	ENSGT00940000155171.a.a ##28	ENSGT00390000000183.g.b #29	ENSGT00390000000183.g.a.a #29	ENSGT00940000161663	ENSGT00550000074988 #30	ENSGT00390000014771.a #31	ENSGT00940000158036 #33	ENSGT00940000155822	ENSGT01030000234607.A.a.a.a
Anatidae	ANCESTRAL SPECIES	3	ENSGT00940000163866.b	ENSGT00390000010872	ENSGT00940000159059	ENSGT00940000157153	ENSGT00940000156563	ENSGT00940000159347	ENSGT00390000004746	ENSGT00940000154150	ENSGT00390000011804	ENSGT00940000157354	ENSGT00390000009209.d	ENSGT00940000155562	ENSGT00390000009802.a #19	ENSGT00940000166969.b	ENSGT00940000154766.a.a #20	ENSGT00940000155533.d #22	ENSGT00940000154952.a.b #23	ENSGT00940000154574.c #24	ENSGT00500000044852.a #26	ENSGT00390000004886	ENSGT00390000012731.a.a #27	ENSGT00940000155171.a.b #28	ENSGT00940000155171.a.a ##28	ENSGT00390000000183.g.b #29	ENSGT00390000000183.g.a.b #29	ENSGT00390000000183.g.a.a #29	ENSGT00940000161663	ENSGT00550000074988 #30	ENSGT00390000014771.a #31	ENSGT00940000158036 #33	ENSGT00940000155822
Duck	DUPLICATION
Duck	MODERN SPECIES	10	ENSAPLG00000017427	EXOC2 (ENSAPLG00000013910)	IRF4 (ENSAPLG00000014646)	DUSP22 (ENSAPLG00000015108)	NQO2 (ENSAPLG00000015289)	RIPK1 (ENSAPLG00000015420)	BPHL (ENSAPLG00000015545)	TUBB2A (ENSAPLG00000027345)	PSMG4 (ENSAPLG00000023970)	SLC22A23 (ENSAPLG00000015771)	ENSAPLG00000013227	PRPF4B (ENSAPLG00000009869)	OTULINL (ENSAPLG00000009753) #19	ENSAPLG00000017143	TRIO (ENSAPLG00000008508) #20	ENSAPLG00000018807 #22	ENSAPLG00000026164 #22	ENSAPLG00000022935	ENSAPLG00000026688	ENSAPLG00000028170 #23	ENSAPLG00000016359 #23	DAP (ENSAPLG00000021887) #24	ANKRD33B (ENSAPLG00000016329) #26	SNRNP48 (ENSAPLG00000016279)	ROPN1L (ENSAPLG00000016260) #27	MARCHF6 (ENSAPLG00000013193) #28	ENSAPLG00000023780 ##28	ENSAPLG00000013173 #29	CCT5 (ENSAPLG00000012960) #30	ENSAPLG00000021678 #29	ENSAPLG00000013115 #29
Duck	MODERN SPECIES	10	EXOC2 (ENSAPLG00000013910)	IRF4 (ENSAPLG00000014646)	DUSP22 (ENSAPLG00000015108)	NQO2 (ENSAPLG00000015289)	RIPK1 (ENSAPLG00000015420)	BPHL (ENSAPLG00000015545)	TUBB2A (ENSAPLG00000027345)	PSMG4 (ENSAPLG00000023970)	SLC22A23 (ENSAPLG00000015771)	ENSAPLG00000013227	PRPF4B (ENSAPLG00000009869)	OTULINL (ENSAPLG00000009753) #19	ENSAPLG00000017143	TRIO (ENSAPLG00000008508) #20	ENSAPLG00000018807 #22	ENSAPLG00000026164 #22	ENSAPLG00000022935	ENSAPLG00000026688	ENSAPLG00000028170 #23	ENSAPLG00000016359 #23	DAP (ENSAPLG00000021887) #24	ANKRD33B (ENSAPLG00000016329) #26	SNRNP48 (ENSAPLG00000016279)	ROPN1L (ENSAPLG00000016260) #27	MARCHF6 (ENSAPLG00000013193) #28	ENSAPLG00000023780 ##28	ENSAPLG00000013173 #29	CCT5 (ENSAPLG00000012960) #30	ENSAPLG00000021678 #29	ENSAPLG00000013115 #29	SBK2 (ENSAPLG00000021365)
Pink-footed goose	MODERN SPECIES	55	EXOC2 (ENSABRG00000011820)	IRF4 (ENSABRG00000011809)	NQO2 (ENSABRG00000011803)	RIPK1 (ENSABRG00000011788)	DUSP22 (ENSABRG00000011775)	BPHL (ENSABRG00000011769)	ENSABRG00000011768	ENSABRG00000011765	ENSABRG00000011762	PSMG4 (ENSABRG00000011758)	SLC22A23 (ENSABRG00000011756)	PXDC1 (ENSABRG00000011748)	PRPF4B (ENSABRG00000011735)	OTULINL (ENSABRG00000011720) #19	TRIO (ENSABRG00000005891) #20	DNAH5 (ENSABRG00000004814) #22
Phasianidae	ANCESTRAL SPECIES	1	ENSGT00940000154673.a	ENSGT00940000160496.b	ENSGT00940000154187.a.a ##7	ENSGT00940000154187.a.b #7	ENSGT00940000157512 #8	ENSGT00730000111450 #10	ENSGT00940000155469 #12	ENSGT00940000160746 #13	ENSGT00390000018047 #14	ENSGT00940000160025 #15	ENSGT00940000158009 #16	ENSGT00390000012189 #17	ENSGT00390000009802.b #18	ENSGT00390000009802.a #19	ENSGT00940000154766.a.a #20	ENSGT00940000155533.d #22	ENSGT00940000154952.a.b #23	ENSGT00940000154574.c #24	ENSGT00500000044852.a #26	ENSGT00390000004886	ENSGT00390000012731.a.a #27	ENSGT00940000155171.a.b #28	ENSGT00390000000183.g.b #29	ENSGT00390000000183.g.a.a #29	ENSGT00940000161663	ENSGT00550000074988 #30	ENSGT00390000014771.a #31	ENSGT00940000158036 #33	ENSGT00940000155822	ENSGT01030000234607.A.a.a.a	ENSGT00390000015121
Phasianidae_b	ANCESTRAL SPECIES	1	ENSGT00940000154673.a	ENSGT00940000160496.b	ENSGT00940000154187.a.a ##7	ENSGT00940000154673.b	ENSGT00940000157512 #8	ENSGT00730000111450 #10	ENSGT00940000155469 #12	ENSGT00940000160746 #13	ENSGT00390000018047 #14	ENSGT00940000160025 #15	ENSGT00940000158009 #16	ENSGT00390000012189 #17	ENSGT00390000009802.b #18	ENSGT00390000009802.a #19	ENSGT00940000154766.a.a #20	ENSGT00940000155533.d #22	ENSGT00940000154952.a.b #23	ENSGT00940000154574.c #24	ENSGT00500000044852.a #26	ENSGT00390000004886	ENSGT00390000012731.a.a #27	ENSGT00940000155171.a.b #28	ENSGT00390000000183.g.b #29	ENSGT00390000000183.g.a.a #29	ENSGT00940000161663	ENSGT00550000074988 #30	ENSGT00390000014771.a #31	ENSGT00940000158036 #33	ENSGT00940000155822	ENSGT01030000234607.A.a.a.a	ENSGT00390000015121
Chicken	MODERN SPECIES	11	ENSGALG00010000594	CDH10 (ENSGALG00010000760) ##7	ENSGALG00010000768	CDH12 (ENSGALG00010000770)	CDH18 (ENSGALG00010000814) #8	BASP1 (ENSGALG00010000822) #10	MYO10 (ENSGALG00010000595) #12	RETREG1 (ENSGALG00010000599) #13	ZNF622 (ENSGALG00010000603) #14	MARCHF11 (ENSGALG00010000605) #15	FBXL7 (ENSGALG00010000714) #16	ANKH (ENSGALG00010000722) #17	OTULIN (ENSGALG00010000728) #18	FAM105A (ENSGALG00010000741) #19	TRIO (ENSGALG00010000753) #20	DNAH5 (ENSGALG00010000590) #22	ENSGALG00010000798 #23	ENSGALG00010000799 #23	DAP (ENSGALG00010000783) #24	ANKRD33B (ENSGALG00010000786) #26	SNRNP48 (ENSGALG00010000787)	ROPN1L (ENSGALG00010000789) #27	MARCH6 (ENSGALG00010000790) #28	ENSGALG00010000792 #29	ENSGALG00010000794	ENSGALG00010000797 #29	SBK2 (ENSGALG00010000591)	CCT5 (ENSGALG00010000592) #30	ATPSCKMT (ENSGALG00010000593) #31	SEMA5A (ENSGALG00010000802) #33	MTRR (ENSGALG00010000803)
Turkey	MODERN SPECIES	22	MBOAT1 (ENSMGAG00000002523)	ENSMGAG00000018910	CDH18 (ENSMGAG00000005465) #8	ENSMGAG00000017283	ENSMGAG00000005603	BASP1 (ENSMGAG00000015420) #10	MYO10 (ENSMGAG00000005628) #12	RETREG1 (ENSMGAG00000005703) #13	ZNF622 (ENSMGAG00000005719) #14	MARCHF11 (ENSMGAG00000005750) #15	FBXL7 (ENSMGAG00000005758) #16	ANKH (ENSMGAG00000005791) #17	OTULIN (ENSMGAG00000005837) #18	OTULINL (ENSMGAG00000005845) #19	TRIO (ENSMGAG00000005861) #20	DNAH5 (ENSMGAG00000005882) #22	CTNND2 (ENSMGAG00000017240) #23	DAP (ENSMGAG00000006012) #24	ANKRD33B (ENSMGAG00000006014) #26	ENSMGAG00000006037	ROPN1L (ENSMGAG00000006020) #27	MARCHF6 (ENSMGAG00000006048) #28	ENSMGAG00000019350 #29	ENSMGAG00000006110 #29	ENSMGAG00000006120	CCT5 (ENSMGAG00000006124) #30	ATPSCKMT (ENSMGAG00000006177) #31	SEMA5A (ENSMGAG00000006186) #33	MTRR (ENSMGAG00000006215)	FASTKD3 (ENSMGAG00000006250)	ENSMGAG00000022121
Japanese quail	MODERN SPECIES	11	CDH10 (ENSCJPG00005015544) ##7	CDH12 (ENSCJPG00005015536) #7	CDH18 (ENSCJPG00005015532) #8	BASP1 (ENSCJPG00005015520) #10	MYO10 (ENSCJPG00005015519) #12	RETREG1 (ENSCJPG00005015518) #13	ZNF622 (ENSCJPG00005015517) #14	MARCHF11 (ENSCJPG00005015515) #15	FBXL7 (ENSCJPG00005015513) #16	ENSCJPG00005015511	OTULIN (ENSCJPG00005015510) #18	OTULINL (ENSCJPG00005015509) #19	ENSCJPG00005015491 #20	ANKH (ENSCJPG00005015490) #17	ENSCJPG00005014953 #20	DNAH5 (ENSCJPG00005014950) #22	CTNND2 (ENSCJPG00005014946) #23	DAP (ENSCJPG00005014944) #24	ANKRD33B (ENSCJPG00005014943) #26	SNRNP48 (ENSCJPG00005014942)	ROPN1L (ENSCJPG00005014941) #27	MARCHF6 (ENSCJPG00005014940) #28	ENSCJPG00005014923 #29	ENSCJPG00005014922 #29	SBK2 (ENSCJPG00005014921)	CCT5 (ENSCJPG00005014920) #30	ATPSCKMT (ENSCJPG00005014919) #31	SEMA5A (ENSCJPG00005014915) #33	MTRR (ENSCJPG00005014912)	FASTKD3 (ENSCJPG00005014911)	CFAP90 (ENSCJPG00005014910)
Neognathae_b	ANCESTRAL SPECIES	3	ENSGT00940000160496.b	ENSGT00940000154187.a.a ##7	ENSGT00940000154187.a.b #7	ENSGT00940000157512 #8	ENSGT00730000111450 #10	ENSGT00940000155469 #12	ENSGT00940000160746 #13	ENSGT00390000018047 #14	ENSGT00940000160025 #15	ENSGT00940000158009 #16	ENSGT00390000012189 #17	ENSGT01090000260321	ENSGT00390000009802.b #18	ENSGT00390000009802.a #19	ENSGT00940000154766.a.a #20	ENSGT00940000155533.d #22	ENSGT00940000154952.a.b #23	ENSGT00940000154574.c #24	ENSGT00500000044852.a #26	ENSGT00390000004886	ENSGT00390000012731.a.a #27	ENSGT00940000155171.a.b #28	ENSGT00390000000183.g.b #29	ENSGT00390000000183.g.a #29	ENSGT00940000161663	ENSGT00550000074988 #30	ENSGT00390000014771.a #31	ENSGT00940000158036 #33	ENSGT00940000155822	ENSGT01030000234607.A.a.a.a	ENSGT00390000015121
Neognathae_c	ANCESTRAL SPECIES	1	ENSGT00940000160496.b	ENSGT00940000154187.a.a ##7	ENSGT00940000154187.a.b #7	ENSGT00940000157512 #8	ENSGT00730000111450 #10	ENSGT00940000155469 #12	ENSGT00940000160746 #13	ENSGT00390000018047 #14	ENSGT00940000160025 #15	ENSGT00940000158009 #16	ENSGT00390000012189 #17	ENSGT01090000260321	ENSGT00390000009802.b #18	ENSGT00390000009802.a #19	ENSGT00940000154766.a.a #20	ENSGT00940000155533.d #22	ENSGT00940000154952.a.b #23	ENSGT00940000154574.c #24	ENSGT00500000044852.a #26	ENSGT00390000004886	ENSGT00390000012731.a.a #27	ENSGT00940000155171.a.b #28	ENSGT00390000000183.g.b #29	ENSGT00390000000183.g.a #29	ENSGT00940000161663	ENSGT00550000074988 #30	ENSGT00390000014771.a #31	ENSGT00940000158036 #33	ENSGT00940000155822	ENSGT01030000234607.A.a.a.a	ENSGT00390000015121
Kakapo	MODERN SPECIES		CDH9 (ENSSHBG00005014849)	ENSSHBG00005014843	CDH10 (ENSSHBG00005014826) ##7	CDH12 (ENSSHBG00005014815) #7	CDH18 (ENSSHBG00005014801) #8	BASP1 (ENSSHBG00005014787) #10	MYO10 (ENSSHBG00005014633) #12	RETREG1 (ENSSHBG00005014529) #13	ZNF622 (ENSSHBG00005014514) #14	MARCHF11 (ENSSHBG00005014500) #15	FBXL7 (ENSSHBG00005014489) #16	ANKH (ENSSHBG00005014471) #17	OTULIN (ENSSHBG00005014451) #18	OTULINL (ENSSHBG00005014443) #19	TRIO (ENSSHBG00005009169) #20	DNAH5 (ENSSHBG00005008454) #22	NETO1 (ENSSHBG00005008375)	CBLN2 (ENSSHBG00005008367)	SOCS6 (ENSSHBG00005008363)	ENSSHBG00005008344	ENSSHBG00005008316	ENSSHBG00005008294	DOK6 (ENSSHBG00005008281)	ENSSHBG00005008264	TMX3 (ENSSHBG00005008246)	ENSSHBG00005008208	DSEL (ENSSHBG00005008200)	CDH19 (ENSSHBG00005008120)	CDH7 (ENSSHBG00005008095)	MC2R (ENSSHBG00005008079)	MC5R (ENSSHBG00005008066)
Golden eagle	MODERN SPECIES	9	CDH10 (ENSACCG00020014718) ##7	ENSACCG00020014702	ENSACCG00020014679	CDH18 (ENSACCG00020014660) #8	BASP1 (ENSACCG00020014643) #10	ENSACCG00020014615	RETREG1 (ENSACCG00020014595) #13	ZNF622 (ENSACCG00020014572) #14	MARCHF11 (ENSACCG00020014555) #15	FBXL7 (ENSACCG00020014543) #16	ANKH (ENSACCG00020014517) #17	ENSACCG00020014505	OTULIN (ENSACCG00020014488) #18	OTULINL (ENSACCG00020014470) #19	TRIO (ENSACCG00020014021) #20	ENSACCG00020013332 #22	ENSACCG00020013316 #23	ENSACCG00020013278 #23	DAP (ENSACCG00020013235) #24	ENSACCG00020013213 #26	ENSACCG00020013193 #26	SNRNP48 (ENSACCG00020013167)	ROPN1L (ENSACCG00020013137) #27	MARCHF6 (ENSACCG00020013077) #28	ENSACCG00020013004 #29	ENSACCG00020012974 #29	SBK2 (ENSACCG00020012949)	CCT5 (ENSACCG00020012935) #30	ATPSCKMT (ENSACCG00020012908) #31	SEMA5A (ENSACCG00020012852) #33	MTRR (ENSACCG00020012805)
Passeriformes	ANCESTRAL SPECIES		ENSGT00940000160496.b	ENSGT00940000154187.a.a ##7	ENSGT00940000154187.a.b #7	ENSGT00940000157512 #8	ENSGT00730000111450 #10	ENSGT00940000155469 #12	ENSGT00940000160746 #13	ENSGT00390000018047 #14	ENSGT00940000160025 #15	ENSGT00940000158009 #16	ENSGT00390000012189 #17	ENSGT01090000260321	ENSGT00390000009802.b #18	ENSGT00390000009802.a #19	ENSGT00940000154766.a.a #20	ENSGT00940000155533.d #22	ENSGT00940000154952.a.b #23	ENSGT00940000154574.c #24	ENSGT00500000044852.a #26	ENSGT00390000004886	ENSGT00390000012731.a.a #27	ENSGT00940000155171.a.b #28	ENSGT00390000000183.g.b #29	ENSGT00390000000183.g.a #29	ENSGT00940000161663	ENSGT00550000074988 #30	ENSGT00390000014771.a #31	ENSGT00940000158036 #33	ENSGT00940000155822	ENSGT01030000234607.A.a.a.a	ENSGT00390000015121
Passeriformes_d	ANCESTRAL SPECIES		ENSGT00940000160496.b	ENSGT00940000154187.a.a ##7	ENSGT00940000154187.a.b #7	ENSGT00940000157512 #8	ENSGT00730000111450 #10	ENSGT00940000155469 #12	ENSGT00940000160746 #13	ENSGT00390000018047 #14	ENSGT00940000160025 #15	ENSGT00940000158009 #16	ENSGT00390000012189 #17	ENSGT01090000260321	ENSGT00390000009802.b #18	ENSGT00390000009802.a #19	ENSGT00940000154766.a.a #20	ENSGT00940000155533.d #22	ENSGT00940000154952.a.b #23	ENSGT00940000154574.c #24	ENSGT00500000044852.a #26	ENSGT00390000004886	ENSGT00390000012731.a.a #27	ENSGT00940000155171.a.b #28	ENSGT00390000000183.g.b #29	ENSGT00390000000183.g.a #29	ENSGT00940000161663	ENSGT00550000074988 #30	ENSGT00390000014771.a #31	ENSGT00940000158036 #33	ENSGT00940000155822	ENSGT01030000234607.A.a.a.a	ENSGT00390000015121
Passeriformes_g	DUPLICATION
Passeriformes_g	ANCESTRAL SPECIES	3	ENSGT00940000154673.a	ENSGT00940000160496.b	ENSGT00940000154187.a.a ##7	ENSGT00940000154187.a.b #7	ENSGT00940000157512 #8	ENSGT00730000111450 #10	ENSGT00940000155469 #12	ENSGT00940000160746 #13	ENSGT00390000018047 #14	ENSGT00940000160025 #15	ENSGT00940000158009 #16	ENSGT00390000012189 #17	ENSGT00390000009802.b #18	ENSGT00390000009802.a #19	ENSGT00940000154766.a.a #20	ENSGT00940000155533.d.c #22	ENSGT00940000154952.a.b #23	ENSGT00940000154574.c #24	ENSGT00500000044852.a #26	ENSGT00390000004886	ENSGT00390000012731.a.a #27	ENSGT00940000155171.a.b #28	ENSGT00390000000183.g.b #29	ENSGT00390000000183.g.a #29	ENSGT00940000161663	ENSGT00550000074988 #30	ENSGT00390000014771.a #31	ENSGT00940000158036 #33	ENSGT00940000155822	ENSGT01030000234607.A.a.a.a	ENSGT00390000015121
Passeroidea	ANCESTRAL SPECIES	2	ENSGT00940000154673.a	ENSGT00940000160496.b	ENSGT00940000154187.a.a ##7	ENSGT00940000154187.a.b #7	ENSGT00940000157512 #8	ENSGT00730000111450 #10	ENSGT00940000155469 #12	ENSGT00940000160746 #13	ENSGT00390000018047 #14	ENSGT00940000160025 #15	ENSGT00940000158009 #16	ENSGT00390000012189 #17	ENSGT00390000009802.b #18	ENSGT00390000009802.a #19	ENSGT00940000154766.a.a #20	ENSGT00940000155533.d.c #22	ENSGT00940000154952.a.b #23	ENSGT00940000154574.c #24	ENSGT00500000044852.a #26	ENSGT00390000004886	ENSGT00390000012731.a.a #27	ENSGT00940000155171.a.b #28	ENSGT00390000000183.g.b #29	ENSGT00390000000183.g.a #29	ENSGT00940000161663	ENSGT00550000074988 #30	ENSGT00390000014771.a #31	ENSGT00940000158036 #33	ENSGT00940000155822	ENSGT01030000234607.A.a.a.a	ENSGT00390000015121
Common canary	DUPLICATION
Common canary	DUPLICATION
Common canary	MODERN SPECIES		CDH10 (ENSSCAG00000004024) ##7	ENSSCAG00000004047	CDH12 (ENSSCAG00000004098) #7	CDH18 (ENSSCAG00000004161) #8	BASP1 (ENSSCAG00000004194) #10	MYO10 (ENSSCAG00000004205) #12	RETREG1 (ENSSCAG00000004221) #13	ZNF622 (ENSSCAG00000004227) #14	ENSSCAG00000004232 #15	FBXL7 (ENSSCAG00000004243) #16	ANKH (ENSSCAG00000004265) #17	OTULIN (ENSSCAG00000004273) #18	OTULINL (ENSSCAG00000004288) #19	TRIO (ENSSCAG00000004308) #20	ENSSCAG00000004325 #22	ENSSCAG00000004333 #22	ENSSCAG00000004377 #22	CTNND2 (ENSSCAG00000004440) #23	DAP (ENSSCAG00000004526) #24	ANKRD33B (ENSSCAG00000004533) #26	SNRNP48 (ENSSCAG00000004553)	ROPN1L (ENSSCAG00000004562) #27	MARCHF6 (ENSSCAG00000004567) #28	ENSSCAG00000004574 #29	ENSSCAG00000004578 #29	SBK2 (ENSSCAG00000004581)	CCT5 (ENSSCAG00000004583) #30	ATPSCKMT (ENSSCAG00000004585) #31	SEMA5A (ENSSCAG00000004619) #33	MTRR (ENSSCAG00000004661)	FASTKD3 (ENSSCAG00000004672)
Common canary	MODERN SPECIES		CDH9 (ENSSCAG00000003904)	CDH10 (ENSSCAG00000004024) ##7	ENSSCAG00000004047	CDH12 (ENSSCAG00000004098) #7	CDH18 (ENSSCAG00000004161) #8	BASP1 (ENSSCAG00000004194) #10	MYO10 (ENSSCAG00000004205) #12	RETREG1 (ENSSCAG00000004221) #13	ZNF622 (ENSSCAG00000004227) #14	ENSSCAG00000004232 #15	FBXL7 (ENSSCAG00000004243) #16	ANKH (ENSSCAG00000004265) #17	OTULIN (ENSSCAG00000004273) #18	OTULINL (ENSSCAG00000004288) #19	TRIO (ENSSCAG00000004308) #20	ENSSCAG00000004325 #22	ENSSCAG00000004333 #22	ENSSCAG00000004377 #22	CTNND2 (ENSSCAG00000004440) #23	DAP (ENSSCAG00000004526) #24	ANKRD33B (ENSSCAG00000004533) #26	SNRNP48 (ENSSCAG00000004553)	ROPN1L (ENSSCAG00000004562) #27	MARCHF6 (ENSSCAG00000004567) #28	ENSSCAG00000004574 #29	ENSSCAG00000004578 #29	SBK2 (ENSSCAG00000004581)	CCT5 (ENSSCAG00000004583) #30	ATPSCKMT (ENSSCAG00000004585) #31	SEMA5A (ENSSCAG00000004619) #33	MTRR (ENSSCAG00000004661)
Common canary	MODERN SPECIES		ENSSCAG00000004047	CDH12 (ENSSCAG00000004098) #7	CDH18 (ENSSCAG00000004161) #8	BASP1 (ENSSCAG00000004194) #10	MYO10 (ENSSCAG00000004205) #12	RETREG1 (ENSSCAG00000004221) #13	ZNF622 (ENSSCAG00000004227) #14	ENSSCAG00000004232 #15	FBXL7 (ENSSCAG00000004243) #16	ANKH (ENSSCAG00000004265) #17	OTULIN (ENSSCAG00000004273) #18	OTULINL (ENSSCAG00000004288) #19	TRIO (ENSSCAG00000004308) #20	ENSSCAG00000004325 #22	ENSSCAG00000004333 #22	ENSSCAG00000004377 #22	CTNND2 (ENSSCAG00000004440) #23	DAP (ENSSCAG00000004526) #24	ANKRD33B (ENSSCAG00000004533) #26	SNRNP48 (ENSSCAG00000004553)	ROPN1L (ENSSCAG00000004562) #27	MARCHF6 (ENSSCAG00000004567) #28	ENSSCAG00000004574 #29	ENSSCAG00000004578 #29	SBK2 (ENSSCAG00000004581)	CCT5 (ENSSCAG00000004583) #30	ATPSCKMT (ENSSCAG00000004585) #31	SEMA5A (ENSSCAG00000004619) #33	MTRR (ENSSCAG00000004661)	FASTKD3 (ENSSCAG00000004672)	CFAP90 (ENSSCAG00000004675)
Zebra finch	DUPLICATION
Zebra finch	DUPLICATION
Zebra finch	MODERN SPECIES	23	UNC93A (ENSTGUG00000009567)	ENSTGUG00000023539	CCR6 (ENSTGUG00000009563)	CEP43 (ENSTGUG00000009547)	RNASET2 (ENSTGUG00000027712)	RPS6KA2 (ENSTGUG00000009488)	MPC1 (ENSTGUG00000009482)	SFT2D1 (ENSTGUG00000009460)	TBXT (ENSTGUG00000009448)	PDE10A (ENSTGUG00000009390)	QKI (ENSTGUG00000009383)	PACRG (ENSTGUG00000009376)	PRKN (ENSTGUG00000009367)	MAP3K4 (ENSTGUG00000009273)	ENSTGUG00000015327 #22	ENSTGUG00000014203 #22	SCCPDH (ENSTGUG00000008414)	ENSTGUG00000008437	ENSTGUG00000022144	SRD5A2 (ENSTGUG00000008454)	MEMO1 (ENSTGUG00000022722)	DPY30 (ENSTGUG00000008482)	SPAST (ENSTGUG00000008494)	ENSTGUG00000027929	SLC30A6 (ENSTGUG00000008515)	QPCT (ENSTGUG00000008529)	PRKD3 (ENSTGUG00000008543)	NDUFAF7 (ENSTGUG00000008574)	CEBPZ (ENSTGUG00000008585)	CEBPZOS (ENSTGUG00000008616)	CRIM1 (ENSTGUG00000008626)
Zebra finch	MODERN SPECIES	23	AFDN (ENSTGUG00000009578)	UNC93A (ENSTGUG00000009567)	ENSTGUG00000023539	CCR6 (ENSTGUG00000009563)	CEP43 (ENSTGUG00000009547)	RNASET2 (ENSTGUG00000027712)	RPS6KA2 (ENSTGUG00000009488)	MPC1 (ENSTGUG00000009482)	SFT2D1 (ENSTGUG00000009460)	TBXT (ENSTGUG00000009448)	PDE10A (ENSTGUG00000009390)	QKI (ENSTGUG00000009383)	PACRG (ENSTGUG00000009376)	PRKN (ENSTGUG00000009367)	MAP3K4 (ENSTGUG00000009273)	ENSTGUG00000015327 #22	ENSTGUG00000014203 #22	SCCPDH (ENSTGUG00000008414)	ENSTGUG00000008437	ENSTGUG00000022144	SRD5A2 (ENSTGUG00000008454)	MEMO1 (ENSTGUG00000022722)	DPY30 (ENSTGUG00000008482)	SPAST (ENSTGUG00000008494)	ENSTGUG00000027929	SLC30A6 (ENSTGUG00000008515)	QPCT (ENSTGUG00000008529)	PRKD3 (ENSTGUG00000008543)	NDUFAF7 (ENSTGUG00000008574)	CEBPZ (ENSTGUG00000008585)	CEBPZOS (ENSTGUG00000008616)
Zebra finch	MODERN SPECIES	23	RSPH9 (ENSTGUG00000008150)	PLD5 (ENSTGUG00000008155)	CEP170 (ENSTGUG00000008164)	ENSTGUG00000008192	AKT3 (ENSTGUG00000008212)	ZBTB18 (ENSTGUG00000008247)	ADSS2 (ENSTGUG00000008252)	DESI2 (ENSTGUG00000024880)	HNRNPU (ENSTGUG00000008309)	EFCAB2 (ENSTGUG00000019448)	KIF26B (ENSTGUG00000008377)	ENSTGUG00000029207	ENSTGUG00000021382	TFB2M (ENSTGUG00000008396)	CNST (ENSTGUG00000008403)	ENSTGUG00000009271 #22	ENSTGUG00000009240	ENSTGUG00000009224	MAD2L1BP (ENSTGUG00000025478)	GTPBP2 (ENSTGUG00000009198)	POLH (ENSTGUG00000009195)	XPO5 (ENSTGUG00000009168)	POLR1C (ENSTGUG00000009159)	YIPF3 (ENSTGUG00000009133)	LRRC73 (ENSTGUG00000009122)	ENSTGUG00000026328	DLK2 (ENSTGUG00000021435)	ENSTGUG00000009082	ZNF318 (ENSTGUG00000009066)	FAM98A (ENSTGUG00000009042)	RASGRP3 (ENSTGUG00000009015)
Medium ground finch	MODERN SPECIES	43				CDH12 (ENSGFOG00000001518) #7	CDH18 (ENSGFOG00000001505) #8	BASP1 (ENSGFOG00000013004) #10	MYO10 (ENSGFOG00000012959) #12	RETREG1 (ENSGFOG00000012951) #13	ZNF622 (ENSGFOG00000012949) #14	MARCHF11 (ENSGFOG00000012947) #15	FBXL7 (ENSGFOG00000012944) #16	ANKH (ENSGFOG00000012941) #17	OTULIN (ENSGFOG00000012939) #18	OTULINL (ENSGFOG00000012937) #19	TRIO (ENSGFOG00000012551) #20	DNAH5 (ENSGFOG00000012373) #22	ENSGFOG00000012362 #23	ENSGFOG00000012345 #23	DAP (ENSGFOG00000012339) #24	ANKRD33B (ENSGFOG00000012281) #26	SNRNP48 (ENSGFOG00000012263)	ROPN1L (ENSGFOG00000012258) #27	MARCHF6 (ENSGFOG00000012243) #28	ENSGFOG00000012228 #29	ENSGFOG00000012223 #29	SBK2 (ENSGFOG00000012218)	CCT5 (ENSGFOG00000012214) #30	ATPSCKMT (ENSGFOG00000012209) #31
Passeriformes_g	ANCESTRAL SPECIES																	ENSGT00940000155533.d.d #22
Passeroidea	ANCESTRAL SPECIES																	ENSGT00940000155533.d.d #22
Zebra finch	MODERN SPECIES	12	TNS3 (ENSTGUG00000007104)	RAMP3 (ENSTGUG00000025072)	ADCY1 (ENSTGUG00000007142)	IGFBP1 (ENSTGUG00000007176)	IGFBP3 (ENSTGUG00000028736)	CDH18 (ENSTGUG00000007189) #8	BASP1 (ENSTGUG00000007269) #10	MYO10 (ENSTGUG00000007271) #12	ZNF622 (ENSTGUG00000007377) #14	MARCHF11 (ENSTGUG00000007392) #15	FBXL7 (ENSTGUG00000027230) #16	ANKH (ENSTGUG00000007404) #17	OTULIN (ENSTGUG00000007427) #18	OTULINL (ENSTGUG00000007437) #19	TRIO (ENSTGUG00000007442) #20	ENSTGUG00000007486 #22	ENSTGUG00000027510 #23	ENSTGUG00000007531 #23	ENSTGUG00000027879	ANKRD33B (ENSTGUG00000026776) #26	SNRNP48 (ENSTGUG00000007575)	ROPN1L (ENSTGUG00000007586) #27	MARCHF6 (ENSTGUG00000007587) #28	ENSTGUG00000007618 #29	ENSTGUG00000007622 #29	SBK2 (ENSTGUG00000021210)	CCT5 (ENSTGUG00000007632) #30	ATPSCKMT (ENSTGUG00000007661) #31	SEMA5A (ENSTGUG00000007664) #33	MTRR (ENSTGUG00000007702)	FASTKD3 (ENSTGUG00000007732)
Flycatcher	MODERN SPECIES	11	CDH9 (ENSFALG00000012759)	CDH10 (ENSFALG00000007598) ##7	CDH12 (ENSFALG00000007539) #7	CDH18 (ENSFALG00000007516) #8	BASP1 (ENSFALG00000014299) #10	MYO10 (ENSFALG00000007507) #12	RETREG1 (ENSFALG00000028884) #13	ZNF622 (ENSFALG00000007501) #14	MARCHF11 (ENSFALG00000007497) #15	FBXL7 (ENSFALG00000025992) #16	ANKH (ENSFALG00000007483) #17	ENSFALG00000026822	OTULIN (ENSFALG00000007473) #18	OTULINL (ENSFALG00000024218) #19	TRIO (ENSFALG00000007445) #20	DNAH5 (ENSFALG00000007364) #22	CTNND2 (ENSFALG00000007784) #23	DAP (ENSFALG00000026204) #24	ANKRD33B (ENSFALG00000007796) #26	ENSFALG00000007797	ROPN1L (ENSFALG00000026260) #27	MARCHF6 (ENSFALG00000007802) #28	ENSFALG00000007809 #29	ENSFALG00000007815 #29	ENSFALG00000026087	CCT5 (ENSFALG00000007823) #30	ATPSCKMT (ENSFALG00000007830) #31	SEMA5A (ENSFALG00000007836) #33	MTRR (ENSFALG00000007168)	FASTKD3 (ENSFALG00000007171)	ENSFALG00000028162
Great tit	MODERN SPECIES	11	FIGNL1 (ENSPMJG00000002898)	DDC (ENSPMJG00000002903)	GRB10 (ENSPMJG00000002920)	ENSPMJG00000002985	CDH18 (ENSPMJG00000003298) #8	BASP1 (ENSPMJG00000003334) #10	MYO10 (ENSPMJG00000003347) #12	RETREG1 (ENSPMJG00000003430) #13	ZNF622 (ENSPMJG00000003437) #14	MARCHF11 (ENSPMJG00000003442) #15	FBXL7 (ENSPMJG00000003474) #16	ANKH (ENSPMJG00000003609) #17	OTULIN (ENSPMJG00000003628) #18	OTULINL (ENSPMJG00000003634) #19	TRIO (ENSPMJG00000003674) #20	DNAH5 (ENSPMJG00000003714) #22	CTNND2 (ENSPMJG00000005003) #23	DAP (ENSPMJG00000006187) #24	ENSPMJG00000006188 #26	ENSPMJG00000006189 #26	SNRNP48 (ENSPMJG00000006195)	ROPN1L (ENSPMJG00000006209) #27	MARCHF6 (ENSPMJG00000006216) #28	ENSPMJG00000006232 #29	ENSPMJG00000006252 #29	ENSPMJG00000006254	CCT5 (ENSPMJG00000006258) #30	ATPSCKMT (ENSPMJG00000006262) #31	SEMA5A (ENSPMJG00000006304) #33	ENSPMJG00000006493	MTRR (ENSPMJG00000006495)
African ostrich	MODERN SPECIES	962														OTULINL (ENSSCUG00000018152) #19	TRIO (ENSSCUG00000018130) #20	DNAH5 (ENSSCUG00000018095) #22
Australian saltwater crocodile	MODERN SPECIES		CDH10 (ENSCPRG00005016543) ##7	CDH12 (ENSCPRG00005016516) #7	CDH18 (ENSCPRG00005016488) #8	ENSCPRG00005016472	ENSCPRG00005016456	BASP1 (ENSCPRG00005016454) #10	MYO10 (ENSCPRG00005016306) #12	RETREG1 (ENSCPRG00005016280) #13	ZNF622 (ENSCPRG00005016273) #14	MARCHF11 (ENSCPRG00005016246) #15	FBXL7 (ENSCPRG00005016244) #16	ANKH (ENSCPRG00005016224) #17	OTULIN (ENSCPRG00005016220) #18	OTULINL (ENSCPRG00005016210) #19	TRIO (ENSCPRG00005015283) #20	DNAH5 (ENSCPRG00005015027) #22	CTNND2 (ENSCPRG00005014971) #23	ENSCPRG00005014921	ANKRD33B (ENSCPRG00005014899) #26	ROPN1L (ENSCPRG00005014893) #27	MARCHF6 (ENSCPRG00005014885) #28	CCT5 (ENSCPRG00005014871) #30	ATPSCKMT (ENSCPRG00005014868) #31	SEMA5A (ENSCPRG00005014820) #33	MTRR (ENSCPRG00005014774)	CFAP90 (ENSCPRG00005014773)	ADCY2 (ENSCPRG00005014765)	TENT4A (ENSCPRG00005014739)	SRD5A1 (ENSCPRG00005014730)	NSUN2 (ENSCPRG00005014722)	UBE2QL1 (ENSCPRG00005014720)
Cryptodira	ANCESTRAL SPECIES	46			ENSGT00940000157512 #8	ENSGT00730000111450 #10	ENSGT00940000155469 #12	ENSGT00940000160746 #13	ENSGT00390000018047 #14	ENSGT00940000160025 #15	ENSGT00940000158009 #16	ENSGT00390000012189 #17	ENSGT01090000260321	ENSGT00390000009802.b #18	ENSGT00390000009802.a #19	ENSGT00940000166969.b	ENSGT00940000154766.a.a #20	ENSGT00940000155533.d #22	ENSGT00940000154952.a.b #23	ENSGT00940000154574.c #24	ENSGT00500000044852.a #26	ENSGT00390000004886	ENSGT00390000012731.a.a #27	ENSGT00940000155171.a.b #28	ENSGT00390000000183.g.b #29	ENSGT00390000000183.h #29	ENSGT00390000000183.g.a #29	ENSGT00940000161663	ENSGT00550000074988 #30	ENSGT00390000014771.a #31	ENSGT00940000158036 #33	ENSGT00940000155822	ENSGT01030000234607.A.a.a.a
Chinese turtle	DUPLICATION
Chinese turtle	MODERN SPECIES	625									FBXL7 (ENSPSIG00000013846) #16	ANKH (ENSPSIG00000011686) #17	OTULIN (ENSPSIG00000011025) #18	OTULINL (ENSPSIG00000010476) #19	ENSPSIG00000001075	ENSPSIG00000014147 #20	ENSPSIG00000014126 #22	ENSPSIG00000011078 #22	ENSPSIG00000001058	ENSPSIG00000010791	ENSPSIG00000001051	MARCHF11 (ENSPSIG00000010335) #15
Chinese turtle	MODERN SPECIES	625										FBXL7 (ENSPSIG00000013846) #16	ANKH (ENSPSIG00000011686) #17	OTULIN (ENSPSIG00000011025) #18	OTULINL (ENSPSIG00000010476) #19	ENSPSIG00000001075	ENSPSIG00000014147 #20	ENSPSIG00000014126 #22	ENSPSIG00000011078 #22	ENSPSIG00000001058	ENSPSIG00000010791	ENSPSIG00000001051	MARCHF11 (ENSPSIG00000010335) #15
Testudinoidea	ANCESTRAL SPECIES	8			ENSGT00940000154187.a.b #7	ENSGT00940000157512 #8	ENSGT00730000111450 #10	ENSGT00940000155469 #12	ENSGT00940000160746 #13	ENSGT00390000018047 #14	ENSGT00940000160025 #15	ENSGT00940000158009 #16	ENSGT00390000012189 #17	ENSGT01090000260321	ENSGT00390000009802.b #18	ENSGT00390000009802.a #19	ENSGT00940000154766.a.a.bb #20	ENSGT00940000155533.d #22	ENSGT00940000154952.a.b #23	ENSGT00940000154574.c #24	ENSGT00500000044852.a #26	ENSGT00390000004886	ENSGT00390000012731.a.a #27	ENSGT00940000155171.a.b #28	ENSGT00390000000183.g.b #29	ENSGT00390000000183.h #29	ENSGT00390000000183.g.a #29	ENSGT00940000161663	ENSGT00550000074988 #30	ENSGT00390000014771.a #31	ENSGT00940000158036 #33	ENSGT00940000155822	ENSGT01030000234607.A.a.a.a
Emydidae	ANCESTRAL SPECIES	58			ENSGT00940000154187.a.b #7	ENSGT00940000157512 #8	ENSGT00730000111450 #10	ENSGT00940000155469 #12	ENSGT00940000160746 #13	ENSGT00390000018047 #14	ENSGT00940000160025 #15	ENSGT00940000158009 #16	ENSGT00390000012189 #17	ENSGT01090000260321	ENSGT00390000009802.b #18	ENSGT00390000009802.a #19	ENSGT00940000154766.a.a.bb #20	ENSGT00940000155533.d #22	ENSGT00940000154952.a.b #23	ENSGT00940000154574.c #24	ENSGT00500000044852.a #26	ENSGT00940000155171.a.b #28	ENSGT00390000000183.g.b #29	ENSGT00390000000183.h #29	ENSGT00390000000183.g.a #29	ENSGT00940000161663	ENSGT00550000074988 #30	ENSGT00390000014771.a #31	ENSGT00940000158036 #33	ENSGT00940000155822	ENSGT01030000234607.A.a.a.a	ENSGT00390000015121	ENSGT00940000156424
Three-toed box turtle	MODERN SPECIES	280														OTULINL (ENSTMTG00000009575) #19	TRIO (ENSTMTG00000005673) #20	DNAH5 (ENSTMTG00000005075) #22	ENSTMTG00000005004	ENSTMTG00000004965	CTNND2 (ENSTMTG00000004668) #23	DAP (ENSTMTG00000004624) #24	ENSTMTG00000004607 #26	ENSTMTG00000004592 #26	MARCHF6 (ENSTMTG00000004525) #28	ENSTMTG00000004479 #29	ENSTMTG00000004453 #29	SBK2 (ENSTMTG00000004421)	CCT5 (ENSTMTG00000004387) #30	ATPSCKMT (ENSTMTG00000004376) #31	SEMA5A (ENSTMTG00000004239) #33	MTRR (ENSTMTG00000004193)	FASTKD3 (ENSTMTG00000004174)
painted turtle	MODERN SPECIES	2416											ANKH (ENSCPBG00000028358) #17	ENSCPBG00000028359	OTULIN (ENSCPBG00000028360) #18	OTULINL (ENSCPBG00000028361) #19	TRIO (ENSCPBG00000028362) #20	DNAH5 (ENSCPBG00000028363) #22	ENSCPBG00000028364	ENSCPBG00000028365	ENSCPBG00000028366	ENSCPBG00000028367	ENSCPBG00000028368	CTNND2 (ENSCPBG00000028369) #23	DAP (ENSCPBG00000028370) #24	ANKRD33B (ENSCPBG00000028371) #26
Testudinidae	ANCESTRAL SPECIES	1			ENSGT00940000154187.a.b #7	ENSGT00940000157512 #8	ENSGT00730000111450 #10	ENSGT00940000155469 #12	ENSGT00940000160746 #13	ENSGT00390000018047 #14	ENSGT00940000160025 #15	ENSGT00940000158009 #16	ENSGT00390000012189 #17	ENSGT01090000260321	ENSGT00390000009802.b #18	ENSGT00390000009802.a #19	ENSGT00940000154766.a.a.bb #20	ENSGT00940000155533.d #22	ENSGT00940000154952.a.b #23	ENSGT00940000154574.c #24	ENSGT00500000044852.a #26	ENSGT00390000004886	ENSGT00390000012731.a.a #27	ENSGT00940000155171.a.b #28	ENSGT00390000000183.g.b #29	ENSGT00390000000183.h #29	ENSGT00390000000183.g.a #29	ENSGT00940000161663	ENSGT00550000074988 #30	ENSGT00390000014771.a #31	ENSGT00940000158036 #33	ENSGT00940000155822	ENSGT01030000234607.A.a.a.a
Abingdon island giant tortoise	MODERN SPECIES	947																ENSCABG00000002277 #22
Goode s thornscrub tortoise	MODERN SPECIES	11	ENSGEVG00005000582	ENSGEVG00005000572	ENSGEVG00005000556	CDH12 (ENSGEVG00005000540) #7	CDH18 (ENSGEVG00005000511) #8	BASP1 (ENSGEVG00005000485) #10	MYO10 (ENSGEVG00005000330) #12	RETREG1 (ENSGEVG00005000289) #13	ZNF622 (ENSGEVG00005000274) #14	MARCHF11 (ENSGEVG00005000252) #15	FBXL7 (ENSGEVG00005000212) #16	ANKH (ENSGEVG00005000152) #17	OTULIN (ENSGEVG00005000104) #18	OTULINL (ENSGEVG00005008156) #19	TRIO (ENSGEVG00005004120) #20	DNAH5 (ENSGEVG00005003470) #22	CTNND2 (ENSGEVG00005003403) #23	DAP (ENSGEVG00005003390) #24	ENSGEVG00005003387 #26	ENSGEVG00005003384 #26	SNRNP48 (ENSGEVG00005003377)	ROPN1L (ENSGEVG00005003331) #27	MARCHF6 (ENSGEVG00005003254) #28	ENSGEVG00005003162 #29	ENSGEVG00005003097 #29	ENSGEVG00005003084 #29	SBK2 (ENSGEVG00005003071)	CCT5 (ENSGEVG00005003051) #30	ATPSCKMT (ENSGEVG00005003039) #31	SEMA5A (ENSGEVG00005003004) #33	ENSGEVG00005002987
Lepidosauria	ANCESTRAL SPECIES	2	ENSGT00940000154187.a.a ##7	ENSGT00940000154673.b	ENSGT00940000157512 #8	ENSGT00730000111450 #10	ENSGT00940000155469 #12	ENSGT00940000160746 #13	ENSGT00390000018047 #14	ENSGT00940000160025 #15	ENSGT00940000158009 #16	ENSGT00390000012189 #17	ENSGT01090000260321	ENSGT00390000009802.b #18	ENSGT00390000009802.a #19	ENSGT00940000166969.b	ENSGT00940000154766.a.a #20	ENSGT00940000155533.d #22	ENSGT00940000154952.a.b #23	ENSGT00940000154574.c #24	ENSGT00500000044852.a #26	ENSGT00390000004886	ENSGT00390000012731.a.a #27	ENSGT00940000155171.a.b #28	ENSGT00390000000183.g.b #29	ENSGT00390000000183.g.a #29	ENSGT00940000156325	ENSGT00940000157664	ENSGT00940000157173	ENSGT00940000155783	ENSGT00390000000916	ENSGT01030000234543.F	ENSGT00450000040303
tuatara	MODERN SPECIES	219																DNAH5 (ENSSPUG00000008989) #22
Episquamata	ANCESTRAL SPECIES	1	ENSGT00940000154187.a.a ##7	ENSGT00940000154673.b	ENSGT00940000157512 #8	ENSGT00730000111450 #10	ENSGT00940000155469 #12	ENSGT00940000160746 #13	ENSGT00390000018047 #14	ENSGT00940000160025 #15	ENSGT00940000158009 #16	ENSGT00390000009802.b #18	ENSGT01090000260321	ENSGT00390000012189 #17	ENSGT00390000009802.a #19	ENSGT00940000166969.b	ENSGT00940000154766.a.a #20	ENSGT00940000155533.d #22	ENSGT00940000154952.a.b #23	ENSGT00940000154574.c #24	ENSGT00500000044852.a #26	ENSGT00390000004886	ENSGT00390000012731.a.a #27	ENSGT00940000155171.a.b #28	ENSGT00390000000183.g.b #29	ENSGT00390000000183.g.a #29	ENSGT00940000156325	ENSGT00940000157664	ENSGT00940000157173	ENSGT00940000155783	ENSGT00390000000916	ENSGT01030000234543.F	ENSGT00450000040303
Laterata	ANCESTRAL SPECIES	5	ENSGT00940000160496.b	ENSGT00940000154187.a.a ##7	ENSGT00940000154673.b	ENSGT00940000157512 #8	ENSGT00730000111450 #10	ENSGT00940000155469 #12	ENSGT00940000160746 #13	ENSGT00390000018047 #14	ENSGT00940000160025 #15	ENSGT00940000158009 #16	ENSGT00390000009802.b #18	ENSGT01090000260321	ENSGT00390000012189 #17	ENSGT00390000009802.a #19	ENSGT00940000154766.a.a #20	ENSGT00940000155533.d #22	ENSGT00940000154952.a.b #23	ENSGT00940000154574.c #24	ENSGT00500000044852.a #26	ENSGT00390000012731.a.a #27	ENSGT00940000155171.a.b #28	ENSGT00390000000183.g.b #29	ENSGT00390000000183.g.a #29	ENSGT00940000156325	ENSGT00940000157664	ENSGT00940000157173	ENSGT00940000155783	ENSGT00390000000916	ENSGT01030000234543.F	ENSGT00450000040303	ENSGT00940000156387
Common wall lizard	MODERN SPECIES	15	ENSPMRG00000010633	ENSPMRG00000010621 #26	ENSPMRG00000010613 #26	DAP (ENSPMRG00000010609) #24	ENSPMRG00000010602	MYO10 (ENSPMRG00000010277) #12	ENSPMRG00000010209	ZNF622 (ENSPMRG00000010202) #14	MARCHF11 (ENSPMRG00000010197) #15	FBXL7 (ENSPMRG00000010193) #16	OTULIN (ENSPMRG00000010182) #18	ENSPMRG00000010173	ANKH (ENSPMRG00000010162) #17	OTULINL (ENSPMRG00000010151) #19	TRIO (ENSPMRG00000007268) #20	DNAH5 (ENSPMRG00000005858) #22	CTNND2 (ENSPMRG00000005602) #23	BASP1 (ENSPMRG00000005584) #10	ENSPMRG00000005581	ENSPMRG00000005574	ENSPMRG00000005571	ENSPMRG00000005566	ENSPMRG00000005560	CDH18 (ENSPMRG00000005552) #8	ENSPMRG00000005544	CDH10 (ENSPMRG00000005531) ##7	ENSPMRG00000005524	ENSPMRG00000005521	ENSPMRG00000005519	ENSPMRG00000005516	CDH9 (ENSPMRG00000005511)
Argentine black and white tegu	MODERN SPECIES	36																DNAH5 (ENSSMRG00000014888) #22	ENSSMRG00000015134	ENSSMRG00000015137	CTNND2 (ENSSMRG00000015141) #23	DAP (ENSSMRG00000015144) #24	ENSSMRG00000015145 #26	ENSSMRG00000015146 #26	ROPN1L (ENSSMRG00000015147) #27	MARCHF6 (ENSSMRG00000015148) #28	ENSSMRG00000015149 #29	ENSSMRG00000015150 #29	NFX1 (ENSSMRG00000015151)	ANKS6 (ENSSMRG00000015157)	GALNT12 (ENSSMRG00000015160)	GABBR2 (ENSSMRG00000015161)	ENSSMRG00000015163
Toxicofera	ANCESTRAL SPECIES	1	ENSGT00940000154187.a.a ##7	ENSGT00940000154673.b	ENSGT00940000157512 #8	ENSGT00730000111450 #10	ENSGT00940000155469 #12	ENSGT00940000160746 #13	ENSGT00390000018047 #14	ENSGT00940000160025 #15	ENSGT00940000158009 #16	ENSGT00390000009802.b #18	ENSGT01090000260321	ENSGT00390000012189 #17	ENSGT00390000009802.a #19	ENSGT00940000166969.b	ENSGT00940000154766.a.a #20	ENSGT00940000155533.d #22	ENSGT00940000154952.a.b #23	ENSGT00940000154574.c #24	ENSGT00500000044852.a #26	ENSGT00390000004886	ENSGT00390000012731.a.a #27	ENSGT00940000155171.a.b #28	ENSGT00390000000183.g.b #29	ENSGT00390000000183.g.a #29	ENSGT00940000156325	ENSGT00940000157664	ENSGT00940000157173	ENSGT00940000155783	ENSGT00390000000916	ENSGT01030000234543.F	ENSGT00450000040303
Elapidae	ANCESTRAL SPECIES	8	ENSGT00940000160496.b	ENSGT00940000154187.a.a ##7	ENSGT00940000154673.b	ENSGT00940000157512 #8	ENSGT00730000111450 #10	ENSGT00940000155469 #12	ENSGT00940000160746 #13	ENSGT00390000018047 #14	ENSGT00940000160025 #15	ENSGT00940000158009 #16	ENSGT00390000009802.b #18	ENSGT00390000012189 #17	ENSGT00390000009802.a #19	ENSGT00940000166969.b	ENSGT00940000154766.a.a #20	ENSGT00940000155533.d #22	ENSGT00940000154952.a.b #23	ENSGT00940000154574.c #24	ENSGT00500000044852.a #26	ENSGT00390000004886	ENSGT00390000012731.a.a #27	ENSGT00940000155171.a.b #28	ENSGT00390000000183.g.b #29	ENSGT00390000000183.g.a #29	ENSGT00940000156325	ENSGT00940000157664	ENSGT00940000157173	ENSGT00940000155783	ENSGT00390000000916	ENSGT01030000234543.F	ENSGT00450000040303
Indian cobra	MODERN SPECIES	2	CDH10 (ENSNNAG00000007256) ##7	ENSNNAG00000007241	ENSNNAG00000007235	ENSNNAG00000007199	CDH18 (ENSNNAG00000007160) #8	BASP1 (ENSNNAG00000007154) #10	ENSNNAG00000007097	RETREG1 (ENSNNAG00000007045) #13	ZNF622 (ENSNNAG00000007008) #14	MARCHF11 (ENSNNAG00000006973) #15	FBXL7 (ENSNNAG00000006960) #16	OTULIN (ENSNNAG00000006936) #18	ANKH (ENSNNAG00000006906) #17	OTULINL (ENSNNAG00000006877) #19	TRIO (ENSNNAG00000003423) #20	DNAH5 (ENSNNAG00000002255) #22	CTNND2 (ENSNNAG00000001906) #23	DAP (ENSNNAG00000001852) #24	ANKRD33B (ENSNNAG00000001844) #26	SNRNP48 (ENSNNAG00000001823)	ROPN1L (ENSNNAG00000001800) #27	MARCHF6 (ENSNNAG00000001667) #28	ENSNNAG00000001600 #29	ENSNNAG00000001585 #29	ENSNNAG00000001560	ENSNNAG00000001535	ANKS6 (ENSNNAG00000001492)	GALNT12 (ENSNNAG00000001470)	GABBR2 (ENSNNAG00000001441)	ELP2 (ENSNNAG00000001397)	CTNNAL1 (ENSNNAG00000001299)
Elapidae_a	ANCESTRAL SPECIES	35	ENSGT00940000160496.b	ENSGT00940000154187.a.a.e ##7	ENSGT00940000154673.b	ENSGT00940000157512 #8	ENSGT00730000111450 #10	ENSGT00940000155469 #12	ENSGT00940000160746 #13	ENSGT00390000018047 #14	ENSGT00940000160025 #15	ENSGT00940000158009 #16	ENSGT00390000009802.b #18	ENSGT00390000012189 #17	ENSGT00390000009802.a #19	ENSGT00940000166969.b	ENSGT00940000154766.a.a #20	ENSGT00940000155533.d #22	ENSGT00940000154952.a.b #23	ENSGT00940000154574.c #24	ENSGT00500000044852.a #26	ENSGT00390000004886	ENSGT00390000012731.a.a #27	ENSGT00940000155171.a.b #28	ENSGT00390000000183.g.b #29	ENSGT00390000000183.g.a #29	ENSGT00940000156325	ENSGT00940000157664	ENSGT00940000157173	ENSGT00940000155783	ENSGT00390000000916	ENSGT01000000215895	ENSGT01030000234543.F
Acanthophiinae	ANCESTRAL SPECIES	35	ENSGT00940000154187.a.a.e ##7	ENSGT00940000154673.b	ENSGT00940000157512 #8	ENSGT00990000212917	ENSGT00730000111450 #10	ENSGT00940000155469 #12	ENSGT00940000160746 #13	ENSGT00390000018047 #14	ENSGT00940000160025 #15	ENSGT00940000158009 #16	ENSGT00390000009802.b #18	ENSGT00390000012189 #17	ENSGT00390000009802.a #19	ENSGT00940000166969.b	ENSGT00940000154766.a.a #20	ENSGT00940000155533.d #22	ENSGT00940000154952.a.b #23	ENSGT00940000154574.c.i #24	ENSGT00500000044852.a #26	ENSGT00390000004886	ENSGT00390000012731.a.a #27	ENSGT00940000155171.a.b #28	ENSGT00390000000183.g.b #29	ENSGT00390000000183.g.a #29	ENSGT00940000156325	ENSGT00940000157664	ENSGT00940000157173	ENSGT00940000155783	ENSGT00390000000916	ENSGT01000000215895	ENSGT01030000234543.F
Eastern brown snake	MODERN SPECIES	15	CDH10 (ENSPTXG00000018105) ##7	ENSPTXG00000018102	CDH18 (ENSPTXG00000018100) #8	ENSPTXG00000018098	ENSPTXG00000018097	BASP1 (ENSPTXG00000018096) #10	ENSPTXG00000018083	RETREG1 (ENSPTXG00000018082) #13	ZNF622 (ENSPTXG00000018081) #14	MARCHF11 (ENSPTXG00000018080) #15	FBXL7 (ENSPTXG00000018079) #16	OTULIN (ENSPTXG00000018078) #18	ANKH (ENSPTXG00000018077) #17	OTULINL (ENSPTXG00000018075) #19	TRIO (ENSPTXG00000013305) #20	DNAH5 (ENSPTXG00000013268) #22	CTNND2 (ENSPTXG00000013231) #23	DAP (ENSPTXG00000013228) #24	ANKRD33B (ENSPTXG00000013224) #26	SNRNP48 (ENSPTXG00000013222)	ROPN1L (ENSPTXG00000013221) #27	MARCHF6 (ENSPTXG00000013220) #28	ENSPTXG00000013219 #29	ENSPTXG00000013218 #29	NFX1 (ENSPTXG00000004148)	ANKS6 (ENSPTXG00000004146)	GALNT12 (ENSPTXG00000004143)	GABBR2 (ENSPTXG00000004142)	ELP2 (ENSPTXG00000004141)	ENSPTXG00000004140	CTNNAL1 (ENSPTXG00000004139)
Mainland tiger snake	MODERN SPECIES	52	CDH18 (ENSNSUG00000008957) #8	ENSNSUG00000008956	BASP1 (ENSNSUG00000008955) #10	MYO10 (ENSNSUG00000008954) #12	RETREG1 (ENSNSUG00000008947) #13	ZNF622 (ENSNSUG00000008946) #14	MARCHF11 (ENSNSUG00000008945) #15	FBXL7 (ENSNSUG00000008944) #16	OTULIN (ENSNSUG00000008942) #18	ANKH (ENSNSUG00000008941) #17	OTULINL (ENSNSUG00000008940) #19	ENSNSUG00000008938	ENSNSUG00000008937	ENSNSUG00000008936 #20	ENSNSUG00000008931 #20	DNAH5 (ENSNSUG00000008930) #22	CTNND2 (ENSNSUG00000008916) #23	ENSNSUG00000008915 #24	ENSNSUG00000008914 #26	ENSNSUG00000008913 #26	SNRNP48 (ENSNSUG00000008912)	ROPN1L (ENSNSUG00000008911) #27	ENSNSUG00000008910	MARCHF6 (ENSNSUG00000008391) #28	ENSNSUG00000008384 #29	ENSNSUG00000008372 #29	NFX1 (ENSNSUG00000007856)	ANKS6 (ENSNSUG00000007853)	GALNT12 (ENSNSUG00000007851)
Blue-lipped sea krait	MODERN SPECIES	8129																ENSLLTG00000014400 #22
Lizard	DUPLICATION
Lizard	MODERN SPECIES	3	PHACTR1 (ENSACAG00000004337)	ENSACAG00000031093	MYO10 (ENSACAG00000000351) #12	RETREG1 (ENSACAG00000000324) #13	ENSACAG00000036779	ZNF622 (ENSACAG00000000306) #14	MARCHF11 (ENSACAG00000000305) #15	FBXL7 (ENSACAG00000000302) #16	ENSACAG00000036252	ENSACAG00000000278 #18	ENSACAG00000034640	ENSACAG00000005537 #17	OTULINL (ENSACAG00000005616) #19	TRIO (ENSACAG00000005742) #20	ENSACAG00000035441	ENSACAG00000005926 #22	ENSACAG00000044167	ENSACAG00000040668	ENSACAG00000038628	ENSACAG00000044597	ENSACAG00000006100	ENSACAG00000035387	CTNND2 (ENSACAG00000002855) #23	ENSACAG00000037772	ENSACAG00000036426	ENSACAG00000023932	ENSACAG00000040490	ENSACAG00000040258	DAP (ENSACAG00000024923) #24	ANKRD33B (ENSACAG00000042057) #26	ENSACAG00000002811
Lizard	MODERN SPECIES	1392																ENSACAG00000024115 #22
Anura	ANCESTRAL SPECIES	203															ENSGT00940000154766.a.a #20	ENSGT00940000155533.d #22	ENSGT00940000154952.a.b #23	ENSGT00940000154574.c #24	ENSGT00500000044852.a #26	ENSGT00390000012731.a.a #27	ENSGT00940000155171.a.b #28	ENSGT00390000000183.e #29	ENSGT00390000000183.f #29	ENSGT00550000074988 #30	ENSGT00390000014771.a #31	ENSGT00940000158036 #33	ENSGT00940000155822	ENSGT01030000234607.A.a.a.a	ENSGT00390000015121	ENSGT00940000156424
Frog	DUPLICATION
Frog	DUPLICATION
Frog	MODERN SPECIES	7	ENSXETG00000045634	ENSXETG00000043913	ENSXETG00000047661	ENSXETG00000042374	ENSXETG00000047030	ENSXETG00000043561	ENSXETG00000044654	ENSXETG00000039421	ENSXETG00000034075	pzp (ENSXETG00000024227)	ENSXETG00000046973	m6pr (ENSXETG00000024225)	phc1 (ENSXETG00000024224)	ENSXETG00000041581	ENSXETG00000045656	ENSXETG00000047349 #22	ENSXETG00000044283 #22	a2m (ENSXETG00000024219)	ENSXETG00000048652	casp2 (ENSXETG00000006978)	ENSXETG00000006979	ENSXETG00000043714	ENSXETG00000040568	pzp (ENSXETG00000007942)	ENSXETG00000008230	a2ml1 (ENSXETG00000017070)	ENSXETG00000042647	ENSXETG00000010226	ENSXETG00000042054	ENSXETG00000006293	prdx3 (ENSXETG00000010230)
Frog	MODERN SPECIES	7	ENSXETG00000043913	ENSXETG00000047661	ENSXETG00000042374	ENSXETG00000047030	ENSXETG00000043561	ENSXETG00000044654	ENSXETG00000039421	ENSXETG00000034075	pzp (ENSXETG00000024227)	ENSXETG00000046973	m6pr (ENSXETG00000024225)	phc1 (ENSXETG00000024224)	ENSXETG00000041581	ENSXETG00000045656	ENSXETG00000047349 #22	ENSXETG00000044283 #22	a2m (ENSXETG00000024219)	ENSXETG00000048652	casp2 (ENSXETG00000006978)	ENSXETG00000006979	ENSXETG00000043714	ENSXETG00000040568	pzp (ENSXETG00000007942)	ENSXETG00000008230	a2ml1 (ENSXETG00000017070)	ENSXETG00000042647	ENSXETG00000010226	ENSXETG00000042054	ENSXETG00000006293	prdx3 (ENSXETG00000010230)	rgs10 (ENSXETG00000046414)
Frog	MODERN SPECIES	6	ENSXETG00000044616	ENSXETG00000049415	ENSXETG00000036948	ENSXETG00000048602	ENSXETG00000043867	slc9a3 (ENSXETG00000023154)	atpsckmt (ENSXETG00000023151) #31	cct5 (ENSXETG00000013995) #30	ENSXETG00000047430	ENSXETG00000049467	ENSXETG00000045202	ENSXETG00000030609	msantd3 (ENSXETG00000013983)	trio (ENSXETG00000013968) #20	ENSXETG00000042093	dnah5 (ENSXETG00000021408) #22	ctnnd2 (ENSXETG00000022200) #23	dap (ENSXETG00000025633) #24	ankrd33b (ENSXETG00000038702) #26	ENSXETG00000042529	ropn1l (ENSXETG00000003552) #27	marchf6 (ENSXETG00000003553) #28	cmbl (ENSXETG00000025629) #29	ENSXETG00000025628	znfx1.2 (ENSXETG00000003560)	ahrr (ENSXETG00000006186)	pigm (ENSXETG00000006188)	pdcd6 (ENSXETG00000027021)	ENSXETG00000046001	anks6 (ENSXETG00000006189)	galnt4 (ENSXETG00000006191)
Leishan spiny toad	MODERN SPECIES	8	ENSLLEG00000025932	SLC6A19 (ENSLLEG00000025994)	ENSLLEG00000026065	ENSLLEG00000026137	ENSLLEG00000026808	ENSLLEG00000026856	ENSLLEG00000026881	ENSLLEG00000026968	ENSLLEG00000027015	ENSLLEG00000027104	VWC2 (ENSLLEG00000027128)	TRIO (ENSLLEG00000027354) #20	ENSLLEG00000028226	ENSLLEG00000028252	ENSLLEG00000028265	DNAH5 (ENSLLEG00000028329) #22	ENSLLEG00000028571	CTNND2 (ENSLLEG00000028640) #23	ENSLLEG00000028931	ENSLLEG00000028942	ENSLLEG00000028949	DAP (ENSLLEG00000028964) #24	ENSLLEG00000028976	ANKRD33B (ENSLLEG00000028992) #26	ENSLLEG00000029030	MARCHF6 (ENSLLEG00000029060) #28	ENSLLEG00000005336 #29	ENSLLEG00000005370 #29	CCT5 (ENSLLEG00000005409) #30	ATPSCKMT (ENSLLEG00000005487) #31	SEMA5A (ENSLLEG00000005684) #33
Coelacanth	MODERN SPECIES	1025															TRIO (ENSLACG00000010439) #20	DNAH5 (ENSLACG00000002629) #22	ENSLACG00000002100	TRGV9 (ENSLACG00000001778)	ENSLACG00000001158	ENSLACG00000000671