Chordata ANCESTRAL SPECIES ENSGT00940000155533 #22 Vertebrata DUPLICATION Vertebrata ANCESTRAL SPECIES ENSGT00940000155533.d #22 Gnathostomata ANCESTRAL SPECIES ENSGT00940000155533.d #22 Euteleostomi ANCESTRAL SPECIES 144 ENSGT00940000166969.b ENSGT00940000154766.a.a #21 ENSGT00940000155533.d #22 ENSGT00390000015121 ENSGT00940000156424 ENSGT00940000157811 ENSGT00950000182886.b.b ENSGT00940000153665.a ENSGT00940000161612 ENSGT00390000014501 ENSGT00950000183199.b ENSGT00940000159433 ENSGT00940000160429 ENSGT00940000161198 ENSGT00940000158596 ENSGT00390000010866 ENSGT00390000015775 ENSGT00940000173658 Sarcopterygii ANCESTRAL SPECIES 169 ENSGT00940000166969.b ENSGT00940000154766.a.a #21 ENSGT00940000155533.d #22 ENSGT00390000015121 ENSGT00940000156424 ENSGT00940000157811 ENSGT00950000182886.b.b ENSGT00940000153665.a ENSGT00940000161612 ENSGT00390000014501 ENSGT00950000183199.b ENSGT00940000159433 ENSGT00940000160429 ENSGT00940000161198 ENSGT00940000158596 ENSGT00390000015775 ENSGT00390000010866 ENSGT01030000234574.A.a Tetrapoda ANCESTRAL SPECIES 97 ENSGT00940000166969.b ENSGT00940000154766.a.a #21 ENSGT00940000155533.d #22 ENSGT00940000154952.a.b #24 ENSGT00940000154574.c #25 ENSGT00500000044852.a #26 ENSGT00390000012731.a.a #27 ENSGT00940000155171.a.b #28 ENSGT00940000155171.a.a ##28 ENSGT00390000000183 #29 ENSGT00550000074988 #30 ENSGT00390000014771.a #31 ENSGT01030000235349 ENSGT00940000158036 #33 ENSGT00940000155822 ENSGT01030000234607.A.a.a.a ENSGT00390000015121 ENSGT00940000156424 Amniota ANCESTRAL SPECIES 3 ENSGT00940000154187.a.a #7 ENSGT00940000154187.a.b #9 ENSGT00940000157512 #10 ENSGT00730000111450 ENSGT00940000155469 #11 ENSGT00940000160746 #12 ENSGT00390000018047 #13 ENSGT00940000160025 #14 ENSGT00940000158009 #15 ENSGT00390000012189 #17 ENSGT01090000260321 ENSGT00390000009802.b #18 ENSGT00390000009802.a #19 ENSGT00940000166969.b ENSGT00940000154766.a.a #21 ENSGT00940000155533.d #22 ENSGT00940000154952.a.b #24 ENSGT00940000154574.c #25 ENSGT00500000044852.a #26 ENSGT00390000012731.a.a #27 ENSGT00940000155171.a.b #28 ENSGT00940000155171.a.a ##28 ENSGT00390000000183 #29 ENSGT00550000074988 #30 ENSGT00390000014771.a #31 ENSGT01030000235349 ENSGT00940000158036 #33 ENSGT00940000155822 ENSGT01030000234607.A.a.a.a ENSGT00390000015121 ENSGT00940000156424 Mammalia ANCESTRAL SPECIES 65 ENSGT00940000154187.a.a #7 ENSGT00940000154187.a.b #9 ENSGT00940000157512 #10 ENSGT00730000111450 ENSGT00940000155469 #11 ENSGT00940000160746 #12 ENSGT00390000018047 #13 ENSGT00940000160025 #14 ENSGT00940000158009 #15 ENSGT00390000012189 #17 ENSGT01090000260321 ENSGT00390000009802.b #18 ENSGT00390000009802.a #19 ENSGT00940000166969.b ENSGT00940000154766.a.a #21 ENSGT00940000155533.d #22 ENSGT00940000154952.a.b #24 ENSGT00940000154574.c #25 ENSGT00500000044852.a #26 ENSGT00390000012731.a.a #27 ENSGT00940000155171.a.b #28 ENSGT00940000155171.a.a ##28 ENSGT00390000000183 #29 ENSGT00550000074988 #30 ENSGT00390000014771.a #31 ENSGT01030000235349 ENSGT00940000158036 #33 ENSGT00940000155822 ENSGT01030000234607.A.a.a.a ENSGT00390000015121 ENSGT00940000156424 Theria ANCESTRAL SPECIES 11 ENSGT00940000154187.a.a #7 ENSGT00940000154187.a.b #9 ENSGT00940000157512 #10 ENSGT00730000111450 ENSGT00940000155469 #11 ENSGT00940000160746 #12 ENSGT00390000018047 #13 ENSGT00940000160025 #14 ENSGT00940000158009 #15 ENSGT00390000012189 #17 ENSGT01090000260321 ENSGT00390000009802.b #18 ENSGT00390000009802.a #19 ENSGT00940000166969.b ENSGT00940000154766.a.a #21 ENSGT00940000155533.d #22 ENSGT00940000154952.a.b #24 ENSGT00940000154574.c #25 ENSGT00500000044852.a #26 ENSGT00390000012731.a.a #27 ENSGT00940000155171.a.b #28 ENSGT00940000155171.a.a ##28 ENSGT00390000000183 #29 ENSGT00550000074988 #30 ENSGT00390000014771.a #31 ENSGT01100000263477.E #32 ENSGT00940000158036 #33 ENSGT00940000155822 ENSGT01030000234607.A.a.a.a ENSGT00390000015121 ENSGT00940000156424 Eutheria ANCESTRAL SPECIES 6 ENSGT00940000154187.a.a #7 ENSGT00940000154187.a.b #9 ENSGT00940000157512 #10 ENSGT00730000111450 ENSGT00940000155469 #11 ENSGT00940000160746 #12 ENSGT00390000018047 #13 ENSGT00940000160025 #14 ENSGT00940000158009 #15 ENSGT00390000012189 #17 ENSGT01090000260321 ENSGT00390000009802.b #18 ENSGT00390000009802.a #19 ENSGT00940000166969.b ENSGT00940000154766.a.a #21 ENSGT00940000155533.d #22 ENSGT00940000154952.a.b #24 ENSGT00940000154574.c #25 ENSGT00500000044852.a #26 ENSGT00390000012731.a.a #27 ENSGT00940000155171.a.b #28 ENSGT00940000155171.a.a ##28 ENSGT00390000000183 #29 ENSGT00550000074988 #30 ENSGT00390000014771.a #31 ENSGT01100000263477.E #32 ENSGT00940000158036 #33 ENSGT00940000155822 ENSGT01030000234607.A.a.a.a ENSGT00390000015121 ENSGT00940000156424 Boreoeutheria ANCESTRAL SPECIES 9 ENSGT00940000154187.a.a #7 ENSGT00940000154187.a.b #9 ENSGT00940000157512 #10 ENSGT00730000111450 ENSGT00940000155469 #11 ENSGT00940000160746 #12 ENSGT00390000018047 #13 ENSGT00940000160025 #14 ENSGT00940000158009 #15 ENSGT00390000012189 #17 ENSGT01090000260321 ENSGT00390000009802.b #18 ENSGT00390000009802.a #19 ENSGT00940000166969.b ENSGT00940000154766.a.a #21 ENSGT00940000155533.d #22 ENSGT00940000154952.a.b #24 ENSGT00940000154574.c #25 ENSGT00500000044852.a #26 ENSGT00390000012731.a.a #27 ENSGT00940000155171.a.b #28 ENSGT00940000155171.a.a ##28 ENSGT00390000000183 #29 ENSGT00550000074988 #30 ENSGT00390000014771.a #31 ENSGT01100000263477.E #32 ENSGT00940000158036 #33 ENSGT00940000155822 ENSGT01030000234607.A.a.a.a ENSGT00390000015121 ENSGT00910000148650 Euarchontoglires ANCESTRAL SPECIES 8 ENSGT00940000160496.b ENSGT00940000154187.a.a #7 ENSGT00940000154187.a.b #9 ENSGT00940000157512 #10 ENSGT00730000111450 ENSGT00940000155469 #11 ENSGT00940000160746 #12 ENSGT00390000018047 #13 ENSGT00940000160025 #14 ENSGT00940000158009 #15 ENSGT00390000012189 #17 ENSGT00390000009802.b #18 ENSGT00390000009802.a #19 ENSGT00940000166969.b ENSGT00940000154766.a.a #21 ENSGT00940000155533.d #22 ENSGT00940000154952.a.b #24 ENSGT00940000154574.c #25 ENSGT00500000044852.a #26 ENSGT00390000012731.a.a #27 ENSGT00940000155171.a.b #28 ENSGT00390000000183 #29 ENSGT00550000074988 #30 ENSGT00390000014771.a #31 ENSGT01100000263477.E #32 ENSGT00940000158036 #33 ENSGT00940000155822 ENSGT01030000234607.A.a.a.a ENSGT00390000015121 ENSGT00910000148650 ENSGT00940000156424 Euarchontoglires_A ANCESTRAL SPECIES 8 ENSGT00940000154673.a ENSGT00940000160496.b ENSGT00940000154187.a.a #7 ENSGT00940000154187.a.b #9 ENSGT00940000157512 #10 ENSGT00730000111450 ENSGT00940000155469 #11 ENSGT00940000160746 #12 ENSGT00390000018047 #13 ENSGT00940000160025 #14 ENSGT00940000158009 #15 ENSGT00390000012189 #17 ENSGT00390000009802.b #18 ENSGT00390000009802.a #19 ENSGT00940000154766.a.a #21 ENSGT00940000155533.d #22 ENSGT00940000154952.a.b #24 ENSGT00940000154574.c #25 ENSGT00500000044852.a #26 ENSGT00390000012731.a.a #27 ENSGT00940000155171.a.b #28 ENSGT00390000000183 #29 ENSGT00550000074988 #30 ENSGT00390000014771.a #31 ENSGT01100000263477.E #32 ENSGT00940000158036 #33 ENSGT00940000155822 ENSGT01030000234607.A.a.a.a ENSGT00390000015121 ENSGT00940000156424 ENSGT00940000157811 Glires ANCESTRAL SPECIES 7 ENSGT00940000154673.a ENSGT00940000160496.b ENSGT00940000154187.a.a #7 ENSGT00940000154187.a.b #9 ENSGT00940000157512 #10 ENSGT00730000111450 ENSGT00940000155469 #11 ENSGT00940000160746 #12 ENSGT00390000018047 #13 ENSGT00940000160025 #14 ENSGT00940000158009 #15 ENSGT00390000012189 #17 ENSGT00390000009802.b #18 ENSGT00390000009802.a #19 ENSGT00940000154766.a.a #21 ENSGT00940000155533.d #22 ENSGT00940000154952.a.b #24 ENSGT00940000154574.c #25 ENSGT00500000044852.a #26 ENSGT00390000012731.a.a #27 ENSGT00940000155171.a.b #28 ENSGT00390000000183 #29 ENSGT00550000074988 #30 ENSGT00390000014771.a #31 ENSGT01100000263477.E #32 ENSGT00940000158036 #33 ENSGT00940000155822 ENSGT01030000234607.A.a.a.a ENSGT00390000015121 ENSGT00940000156424 ENSGT00940000157811 Rodentia ANCESTRAL SPECIES 7 ENSGT00940000154673.a ENSGT00940000160496.b ENSGT00940000154187.a.a #7 ENSGT00940000154187.a.b #9 ENSGT00940000157512 #10 ENSGT00730000111450 ENSGT00940000155469 #11 ENSGT00940000160746 #12 ENSGT00390000018047 #13 ENSGT00940000160025 #14 ENSGT00940000158009 #15 ENSGT00390000012189 #17 ENSGT00390000009802.b #18 ENSGT00390000009802.a #19 ENSGT00940000154766.a.a #21 ENSGT00940000155533.d #22 ENSGT00940000154952.a.b #24 ENSGT00940000154574.c #25 ENSGT00500000044852.a #26 ENSGT00390000012731.a.a #27 ENSGT00940000155171.a.b #28 ENSGT00390000000183 #29 ENSGT00550000074988 #30 ENSGT00390000014771.a #31 ENSGT01100000263477.E #32 ENSGT00940000158036 #33 ENSGT00940000155822 ENSGT01030000234607.A.a.a.a ENSGT00390000015121 ENSGT00940000156424 ENSGT00940000157811 Rodentia_B ANCESTRAL SPECIES 4 ENSGT00940000154673.a ENSGT00940000160496.b ENSGT00940000154187.a.a #7 ENSGT00940000154187.a.b #9 ENSGT00940000157512 #10 ENSGT00730000111450 ENSGT00940000155469 #11 ENSGT00940000160746 #12 ENSGT00390000018047 #13 ENSGT00940000160025 #14 ENSGT00940000158009 #15 ENSGT00390000012189 #17 ENSGT00390000009802.b #18 ENSGT00390000009802.a #19 ENSGT00940000154766.a.a #21 ENSGT00940000155533.d #22 ENSGT00940000154952.a.b #24 ENSGT00940000154574.c #25 ENSGT00500000044852.a #26 ENSGT00390000012731.a.a #27 ENSGT00940000155171.a.b #28 ENSGT00390000000183 #29 ENSGT00550000074988 #30 ENSGT00390000014771.a #31 ENSGT01100000263477.E #32 ENSGT00940000158036 #33 ENSGT00940000155822 ENSGT01030000234607.A.a.a.a ENSGT00390000015121 ENSGT00940000156424 ENSGT00940000157811 Myomorpha ANCESTRAL SPECIES 5 ENSGT00940000154673.a ENSGT00940000160496.b ENSGT00940000154187.a.a #7 ENSGT00940000154187.a.b #9 ENSGT00940000157512 #10 ENSGT00730000111450 ENSGT00940000155469 #11 ENSGT00940000160746 #12 ENSGT00390000018047 #13 ENSGT00940000160025 #14 ENSGT00940000158009 #15 ENSGT00390000012189 #17 ENSGT00390000009802.b #18 ENSGT00390000009802.a #19 ENSGT00940000154766.a.a #21 ENSGT00940000155533.d #22 ENSGT00940000154952.a.b #24 ENSGT00940000154574.c #25 ENSGT00500000044852.a #26 ENSGT00390000012731.a.a #27 ENSGT00940000155171.a.b #28 ENSGT00390000000183 #29 ENSGT00550000074988 #30 ENSGT00390000014771.a #31 ENSGT01100000263477.E #32 ENSGT00940000158036 #33 ENSGT00940000155822 ENSGT01030000234607.A.a.a.a ENSGT00390000015121 ENSGT00940000156424 ENSGT00940000157811 Muroidea ANCESTRAL SPECIES 4 ENSGT00940000154673.a ENSGT00940000160496.b ENSGT00940000154187.a.a #7 ENSGT00940000154187.a.b #9 ENSGT00940000157512 #10 ENSGT00730000111450 ENSGT00940000155469 #11 ENSGT00940000160746 #12 ENSGT00390000018047 #13 ENSGT00940000160025 #14 ENSGT00940000158009 #15 ENSGT00390000012189 #17 ENSGT00390000009802.b #18 ENSGT00390000009802.a #19 ENSGT00940000154766.a.a #21 ENSGT00940000155533.d #22 ENSGT00940000154952.a.b #24 ENSGT00940000154574.c #25 ENSGT00500000044852.a #26 ENSGT00390000012731.a.a #27 ENSGT00940000155171.a.b #28 ENSGT00390000000183 #29 ENSGT00550000074988 #30 ENSGT00390000014771.a #31 ENSGT01100000263477.E #32 ENSGT00940000158036 #33 ENSGT00940000153165.a.b.a.a.a.a.a #36 ENSGT00940000155822 ENSGT01030000234607.A.a.a.a ENSGT00390000015121 ENSGT00940000156424 Muroidea_A ANCESTRAL SPECIES 11 ENSGT00940000154673.a ENSGT00940000160496.b ENSGT00940000154187.a.a #7 ENSGT00940000154187.a.b #9 ENSGT00940000157512 #10 ENSGT00730000111450 ENSGT00940000155469 #11 ENSGT00940000160746 #12 ENSGT00390000018047 #13 ENSGT00940000160025 #14 ENSGT00940000158009 #15 ENSGT00390000012189 #17 ENSGT00390000009802.b #18 ENSGT00390000009802.a #19 ENSGT00940000154766.a.a #21 ENSGT00940000155533.d #22 ENSGT00940000154952.a.b #24 ENSGT00940000154574.c #25 ENSGT00500000044852.a #26 ENSGT00390000012731.a.a #27 ENSGT00940000155171.a.b #28 ENSGT00390000000183 #29 ENSGT00550000074988 #30 ENSGT00390000014771.a #31 ENSGT01100000263477.E #32 ENSGT00940000158036 #33 ENSGT00940000155274.a.b.c.b #34 ENSGT00940000153165.a.a.c.a ##36 ENSGT00940000155822 ENSGT01030000234607.A.a.a.a ENSGT00390000015121 Cricetidae ANCESTRAL SPECIES 11 ENSGT00940000154673.a ENSGT00940000160496.b ENSGT00940000154187.a.a.k #7 ENSGT00940000154187.a.b #9 ENSGT00940000157512 #10 ENSGT00730000111450 ENSGT00940000155469 #11 ENSGT00940000160746 #12 ENSGT00390000018047 #13 ENSGT00940000160025 #14 ENSGT00940000158009 #15 ENSGT00390000012189 #17 ENSGT00390000009802.b #18 ENSGT00390000009802.a #19 ENSGT00940000154766.a.a #21 ENSGT00940000155533.d #22 ENSGT00940000154952.a.b #24 ENSGT00940000154574.c #25 ENSGT00500000044852.a #26 ENSGT00390000012731.a.a #27 ENSGT00940000155171.a.b #28 ENSGT00390000000183 #29 ENSGT00550000074988 #30 ENSGT00390000014771.a #31 ENSGT01100000263477.E #32 ENSGT00940000158036 #33 ENSGT00940000155274.a.b.c.b #34 ENSGT00940000155822 ENSGT01030000234607.A.a.a.a ENSGT00390000015121 ENSGT00940000156424 Cricetidae_B ANCESTRAL SPECIES 37 ENSGT00940000154673.a ENSGT00940000160496.b ENSGT00940000154187.a.a.k #7 ENSGT00940000154187.a.b #9 ENSGT00940000157512 #10 ENSGT00730000111450 ENSGT00940000155469 #11 ENSGT00940000160746 #12 ENSGT00390000018047 #13 ENSGT00940000160025 #14 ENSGT00940000158009 #15 ENSGT00390000012189 #17 ENSGT00390000009802.b #18 ENSGT00390000009802.a #19 ENSGT00940000154766.a.a #21 ENSGT00940000155533.d #22 ENSGT00940000154952.a.b #24 ENSGT00940000154574.c #25 ENSGT00500000044852.a #26 ENSGT00390000012731.a.a #27 ENSGT00940000155171.a.b #28 ENSGT00390000000183 #29 ENSGT00550000074988 #30 ENSGT00390000014771.a #31 ENSGT01100000263477.E #32 ENSGT00940000158036 #33 ENSGT00940000155274.a.b.c.b #34 ENSGT00940000155274.a.b.c.a.a.b ##34 ENSGT00940000153165.a.b.a.a.a.b.a.a.a.b ##36 ENSGT00940000153165.a.b.a.a.a.b.a.a.b ##36 ENSGT00940000155822 Northern American deer mouse MODERN SPECIES 6 ENSPEMG00000025057 #7 ENSPEMG00000009396 #8 Cdh12 (ENSPEMG00000019791) #9 Cdh18 (ENSPEMG00000019662) #10 Myo10 (ENSPEMG00000019555) #11 Retreg1 (ENSPEMG00000000999) #12 Zfp622 (ENSPEMG00000019901) #13 Marchf11 (ENSPEMG00000020080) #14 Fbxl7 (ENSPEMG00000019691) #15 ENSPEMG00000028925 #16 Ank (ENSPEMG00000021948) #17 Otulin (ENSPEMG00000021987) #18 Otulinl (ENSPEMG00000021713) #19 ENSPEMG00000029934 #20 Trio (ENSPEMG00000023464) #21 Dnah5 (ENSPEMG00000021827) #22 ENSPEMG00000030112 #23 Ctnnd2 (ENSPEMG00000023801) #24 Dap (ENSPEMG00000030453) #25 Ankrd33b (ENSPEMG00000022398) #26 Ropn1l (ENSPEMG00000021994) #27 Marchf6 (ENSPEMG00000023219) #28 Cmbl (ENSPEMG00000023901) #29 ENSPEMG00000022370 #30 Atpsckmt (ENSPEMG00000014425) #31 Tas2r119 (ENSPEMG00000030438) #32 Sema5a (ENSPEMG00000021663) #33 Zfp712 (ENSPEMG00000021548) #34 ENSPEMG00000030912 #35 ENSPEMG00000008961 #36 ENSPEMG00000027704 #37 Prairie vole MODERN SPECIES 6 Cdh9 (ENSMOCG00000000711) Cdh10 (ENSMOCG00000012651) #7 Cdh12 (ENSMOCG00000001651) #9 Cdh18 (ENSMOCG00000016086) #10 Basp1 (ENSMOCG00000001482) Myo10 (ENSMOCG00000001624) #11 Retreg1 (ENSMOCG00000022687) #12 ENSMOCG00000014111 #13 Marchf11 (ENSMOCG00000005112) #14 Fbxl7 (ENSMOCG00000022587) #15 ENSMOCG00000003518 Ank (ENSMOCG00000015187) #17 Otulin (ENSMOCG00000018018) #18 Otulinl (ENSMOCG00000014807) #19 Trio (ENSMOCG00000017194) #21 Dnah5 (ENSMOCG00000002151) #22 Ctnnd2 (ENSMOCG00000011727) #24 ENSMOCG00000008873 Dap (ENSMOCG00000007932) #25 Ankrd33b (ENSMOCG00000012066) #26 Ropn1l (ENSMOCG00000019170) #27 Marchf6 (ENSMOCG00000005447) #28 Cmbl (ENSMOCG00000000662) #29 Cct5 (ENSMOCG00000011025) #30 Atpsckmt (ENSMOCG00000010214) #31 Sema5a (ENSMOCG00000012532) #33 Zfp712 (ENSMOCG00000002167) #34 ENSMOCG00000012715 #36 ENSMOCG00000017127 Rslcan18 (ENSMOCG00000000365) ##36 Zfp748 (ENSMOCG00000002232) ##34 Cricetinae ANCESTRAL SPECIES 7 ENSGT00940000154673.a ENSGT00940000160496.b ENSGT00940000154187.a.a.k #7 ENSGT00940000154187.a.b #9 ENSGT00940000157512 #10 ENSGT00730000111450 ENSGT00940000155469 #11 ENSGT00940000160746 #12 ENSGT00390000018047 #13 ENSGT00940000160025 #14 ENSGT00940000158009 #15 ENSGT00390000012189 #17 ENSGT00390000009802.b #18 ENSGT00390000009802.a #19 ENSGT00940000154766.a.a #21 ENSGT00940000155533.d #22 ENSGT00940000154952.a.b #24 ENSGT00940000154574.c #25 ENSGT00500000044852.a #26 ENSGT00390000012731.a.a #27 ENSGT00940000155171.a.b #28 ENSGT00390000000183 #29 ENSGT00550000074988 #30 ENSGT00390000014771.a #31 ENSGT01100000263477.E #32 ENSGT00940000158036 #33 ENSGT00940000155274.a.b.c.b #34 ENSGT00940000153165.a.b.a.a.a.a.a.d #36 ENSGT00940000155274.a.b.c.a.b.c ##34 ENSGT00940000154251.A ENSGT00940000155274.a.b.c.a.b.d ##34 Chinese hamster chok1gshd MODERN SPECIES 1 Cdh9 (ENSCGRG00001007635) Cdh10 (ENSCGRG00001001483) #7 Cdh12 (ENSCGRG00001015709) #9 Cdh18 (ENSCGRG00001012079) #10 Basp1 (ENSCGRG00001010849) Myo10 (ENSCGRG00001006922) #11 Retreg1 (ENSCGRG00001003409) #12 Zfp622 (ENSCGRG00001024661) #13 Marchf11 (ENSCGRG00001000995) #14 Fbxl7 (ENSCGRG00001002330) #15 Ank (ENSCGRG00001007186) #17 Otulin (ENSCGRG00001009097) #18 Otulinl (ENSCGRG00001013918) #19 Trio (ENSCGRG00001018514) #21 ENSCGRG00001007408 Dnah5 (ENSCGRG00001002726) #22 ENSCGRG00001008572 ENSCGRG00001009256 Ctnnd2 (ENSCGRG00001012344) #24 ENSCGRG00001009079 Dap (ENSCGRG00001007075) #25 Ankrd33b (ENSCGRG00001016919) #26 Ropn1l (ENSCGRG00001000818) #27 Marchf6 (ENSCGRG00001001973) #28 Cmbl (ENSCGRG00001002936) #29 Cct5 (ENSCGRG00001003625) #30 Atpsckmt (ENSCGRG00001004624) #31 ENSCGRG00001017092 ENSCGRG00001005665 #32 Sema5a (ENSCGRG00001006570) #33 ENSCGRG00001021480 Golden Hamster MODERN SPECIES 729 Cdh12 (ENSMAUG00000014852) #9 Cdh18 (ENSMAUG00000016819) #10 Myo10 (ENSMAUG00000018170) #11 Retreg1 (ENSMAUG00000000079) #12 Zfp622 (ENSMAUG00000010395) #13 Marchf11 (ENSMAUG00000019378) #14 Fbxl7 (ENSMAUG00000002455) #15 Ank (ENSMAUG00000000192) #17 Otulin (ENSMAUG00000004691) #18 ENSMAUG00000007540 #19 Trio (ENSMAUG00000006892) #21 Dnah5 (ENSMAUG00000000528) #22 Murinae ANCESTRAL SPECIES 24 ENSGT00940000154673.a ENSGT00940000160496.b ENSGT00940000154187.a.a #7 ENSGT00940000154187.a.b #9 ENSGT00940000157512 #10 ENSGT00730000111450 ENSGT00940000155469 #11 ENSGT00940000160746 #12 ENSGT00390000018047 #13 ENSGT00940000160025 #14 ENSGT00940000158009 #15 ENSGT00390000012189 #17 ENSGT00390000009802.b #18 ENSGT00390000009802.a #19 ENSGT00940000154766.a.a #21 ENSGT00940000155533.d #22 ENSGT00940000154952.a.b #24 ENSGT00940000154574.c #25 ENSGT00500000044852.a #26 ENSGT00390000012731.a.a #27 ENSGT00940000155171.a.b #28 ENSGT00390000000183 #29 ENSGT00550000074988 #30 ENSGT00390000014771.a #31 ENSGT01100000263477.E #32 ENSGT00940000158036 #33 ENSGT00940000155274.a.b.c.b #34 ENSGT00940000153165.a.a.c.a ##36 Mus ANCESTRAL SPECIES 22 ENSGT00940000154673.a ENSGT00940000160496.b ENSGT00940000154187.a.a #7 ENSGT00940000154187.a.b #9 ENSGT00940000157512 #10 ENSGT00730000111450 ENSGT00940000155469 #11 ENSGT00940000160746 #12 ENSGT00390000018047 #13 ENSGT00940000160025 #14 ENSGT00940000158009 #15 ENSGT00390000012189 #17 ENSGT00390000009802.b #18 ENSGT00390000009802.a #19 ENSGT00940000154766.a.a #21 ENSGT00940000155533.d #22 ENSGT00940000154952.a.b #24 ENSGT00940000154574.c #25 ENSGT00500000044852.a #26 ENSGT00390000012731.a.a #27 ENSGT00940000155171.a.b #28 ENSGT00390000000183 #29 ENSGT00550000074988 #30 ENSGT00390000014771.a #31 ENSGT01100000263477.E #32 ENSGT00940000158036 #33 Mus_A ANCESTRAL SPECIES 13 ENSGT00940000160496.b ENSGT00940000154187.a.a.i #7 ENSGT00940000154187.a.b #9 ENSGT00940000157512 #10 ENSGT00860000135677 ENSGT00730000111450 ENSGT00940000155469 #11 ENSGT00940000160746 #12 ENSGT00390000018047 #13 ENSGT00940000160025 #14 ENSGT00940000158009 #15 ENSGT00390000012189 #17 ENSGT00390000009802.b #18 ENSGT00390000009802.a #19 ENSGT00940000154766.a.a #21 ENSGT00940000155533.d #22 ENSGT00940000154952.a.b #24 ENSGT00940000154574.c #25 ENSGT00500000044852.a #26 ENSGT00390000012731.a.a #27 ENSGT00940000155171.a.b #28 ENSGT00390000000183 #29 ENSGT00550000074988 #30 ENSGT00390000014771.a #31 ENSGT01100000263477.E #32 ENSGT00940000158036 #33 ENSGT00940000157222 ENSGT00950000182878.b.b.o ENSGT00390000018110 ENSGT00940000162862 ENSGT00940000154181.a Mus_B ANCESTRAL SPECIES 12 ENSGT00940000154187.a.a.i #7 ENSGT00390000005330.cb ENSGT00940000154187.a.b #9 ENSGT00940000157512 #10 ENSGT00860000135677 ENSGT00730000111450 ENSGT00940000155469 #11 ENSGT00940000160746 #12 ENSGT00390000018047 #13 ENSGT00940000160025 #14 ENSGT00940000158009 #15 ENSGT00390000012189 #17 ENSGT00390000009802.b #18 ENSGT00390000009802.a #19 ENSGT00940000154766.a.a #21 ENSGT00940000155533.d #22 ENSGT00940000154952.a.b #24 ENSGT00940000154574.c #25 ENSGT00500000044852.a #26 ENSGT00390000012731.a.a #27 ENSGT00940000155171.a.b #28 ENSGT00390000000183 #29 ENSGT00550000074988 #30 ENSGT00390000014771.a #31 ENSGT01100000263477.E #32 ENSGT00940000158036 #33 ENSGT00940000157222 ENSGT00950000182878.b.b.o ENSGT00390000018110 ENSGT00940000162862 ENSGT00940000154181.a Mus_C ANCESTRAL SPECIES 28 ENSGT00940000154187.a.a.i #7 ENSGT00390000005330.cb ENSGT00940000154187.a.b #9 ENSGT00940000157512 #10 ENSGT00860000135677 ENSGT00730000111450 ENSGT00940000155469 #11 ENSGT00940000160746 #12 ENSGT00390000018047 #13 ENSGT00940000160025 #14 ENSGT00940000158009 #15 ENSGT00390000012189 #17 ENSGT00390000009802.b #18 ENSGT00390000009802.a #19 ENSGT00940000154766.a.a #21 ENSGT00940000155533.d #22 ENSGT00940000154952.a.b #24 ENSGT00940000154574.c #25 ENSGT00500000044852.a #26 ENSGT00390000012731.a.a #27 ENSGT00940000155171.a.b #28 ENSGT00390000000183 #29 ENSGT00550000074988 #30 ENSGT00390000014771.a #31 ENSGT01100000263477.E #32 ENSGT00940000158036 #33 ENSGT00940000157222 ENSGT00950000182878.b.b.o ENSGT00390000018110 ENSGT00940000162862 ENSGT00940000154181.a Steppe mouse MODERN SPECIES 3249 ENSMSIG00000021319 Myo10 (ENSMSIG00000021199) #11 Retreg1 (ENSMSIG00000021158) #12 Zfp622 (ENSMSIG00000021146) #13 ENSMSIG00000021139 ENSMSIG00000021134 Marchf11 (ENSMSIG00000021111) #14 Fbxl7 (ENSMSIG00000021074) #15 Ank (ENSMSIG00000020995) #17 Otulin (ENSMSIG00000020973) #18 Otulinl (ENSMSIG00000020899) #19 Trio (ENSMSIG00000020539) #21 Dnah5 (ENSMSIG00000020379) #22 spretus MODERN SPECIES 6 Cdh12 (MGP_SPRETEiJ_G0020585) #9 Cdh18 (MGP_SPRETEiJ_G0020586) #10 MGP_SPRETEiJ_G0020587 Basp1 (MGP_SPRETEiJ_G0020588) MGP_SPRETEiJ_G0020589 Myo10 (MGP_SPRETEiJ_G0020590) #11 Retreg1 (MGP_SPRETEiJ_G0020591) #12 Zfp622 (MGP_SPRETEiJ_G0020592) #13 Marchf11 (MGP_SPRETEiJ_G0020593) #14 Fbxl7 (MGP_SPRETEiJ_G0020594) #15 Ank (MGP_SPRETEiJ_G0020595) #17 Otulin (MGP_SPRETEiJ_G0020596) #18 Otulinl (MGP_SPRETEiJ_G0020597) #19 Trio (MGP_SPRETEiJ_G0020598) #21 MGP_SPRETEiJ_G0020599 Dnah5 (MGP_SPRETEiJ_G0020600) #22 Ctnnd2 (MGP_SPRETEiJ_G0020601) #24 Dap (MGP_SPRETEiJ_G0020602) #25 MGP_SPRETEiJ_G0020603 Ankrd33b (MGP_SPRETEiJ_G0020604) #26 Ropn1l (MGP_SPRETEiJ_G0020605) #27 Marchf6 (MGP_SPRETEiJ_G0020606) #28 Cmbl (MGP_SPRETEiJ_G0020607) #29 Cct5 (MGP_SPRETEiJ_G0020608) #30 Atpsckmt (MGP_SPRETEiJ_G0020609) #31 Tas2r119 (MGP_SPRETEiJ_G0020610) #32 Sema5a (MGP_SPRETEiJ_G0020611) #33 Cpq (MGP_SPRETEiJ_G0020613) Tspyl5 (MGP_SPRETEiJ_G0020614) Mtdh (MGP_SPRETEiJ_G0020615) Laptm4b (MGP_SPRETEiJ_G0020616) Mouse MODERN SPECIES 6 Cdh9 (ENSMUSG00000025370) Cdh10 (ENSMUSG00000022321) #7 Cdh12 (ENSMUSG00000040452) #9 Acot10 (ENSMUSG00000047565) Cdh18 (ENSMUSG00000040420) #10 Basp1 (ENSMUSG00000045763) Myo10 (ENSMUSG00000022272) #11 Retreg1 (ENSMUSG00000022270) #12 Zfp622 (ENSMUSG00000052253) #13 Marchf11 (ENSMUSG00000022269) #14 Fbxl7 (ENSMUSG00000043556) #15 Ank (ENSMUSG00000022265) #17 Otulin (ENSMUSG00000046034) #18 Otulinl (ENSMUSG00000056069) #19 Trio (ENSMUSG00000022263) #21 Dnah5 (ENSMUSG00000022262) #22 Ctnnd2 (ENSMUSG00000022240) #24 Dap (ENSMUSG00000039168) #25 Ankrd33b (ENSMUSG00000022237) #26 Ropn1l (ENSMUSG00000022236) #27 Marchf6 (ENSMUSG00000039100) #28 Cmbl (ENSMUSG00000022235) #29 Cct5 (ENSMUSG00000022234) #30 Atpsckmt (ENSMUSG00000039065) #31 Tas2r119 (ENSMUSG00000045267) #32 Sema5a (ENSMUSG00000022231) #33 Sdc2 (ENSMUSG00000022261) Cpq (ENSMUSG00000039007) Tspyl5 (ENSMUSG00000038984) Mtdh (ENSMUSG00000022255) Laptm4b (ENSMUSG00000022257) Ryukyu mouse MODERN SPECIES 6 Cdh10 (MGP_CAROLIEiJ_G0019690) #7 Cdh12 (MGP_CAROLIEiJ_G0019691) #9 Cdh18 (MGP_CAROLIEiJ_G0019692) #10 MGP_CAROLIEiJ_G0019693 Basp1 (MGP_CAROLIEiJ_G0019694) MGP_CAROLIEiJ_G0019695 Myo10 (MGP_CAROLIEiJ_G0019696) #11 Retreg1 (MGP_CAROLIEiJ_G0019697) #12 Zfp622 (MGP_CAROLIEiJ_G0019698) #13 MGP_CAROLIEiJ_G0019699 #14 Fbxl7 (MGP_CAROLIEiJ_G0019700) #15 Ank (MGP_CAROLIEiJ_G0019701) #17 Otulin (MGP_CAROLIEiJ_G0019702) #18 Otulinl (MGP_CAROLIEiJ_G0019703) #19 Trio (MGP_CAROLIEiJ_G0019704) #21 Dnah5 (MGP_CAROLIEiJ_G0019705) #22 Ctnnd2 (MGP_CAROLIEiJ_G0019706) #24 Dap (MGP_CAROLIEiJ_G0019707) #25 Ankrd33b (MGP_CAROLIEiJ_G0019708) #26 Ropn1l (MGP_CAROLIEiJ_G0019709) #27 Marchf6 (MGP_CAROLIEiJ_G0019710) #28 Cmbl (MGP_CAROLIEiJ_G0019711) #29 Cct5 (MGP_CAROLIEiJ_G0019712) #30 Atpsckmt (MGP_CAROLIEiJ_G0019713) #31 Tas2r119 (MGP_CAROLIEiJ_G0019714) #32 Sema5a (MGP_CAROLIEiJ_G0019715) #33 Sdc2 (MGP_CAROLIEiJ_G0019716) Cpq (MGP_CAROLIEiJ_G0019717) Tspyl5 (MGP_CAROLIEiJ_G0019718) Mtdh (MGP_CAROLIEiJ_G0019719) Laptm4b (MGP_CAROLIEiJ_G0019720) Shrew mouse MODERN SPECIES 2 Cdh10 (MGP_PahariEiJ_G0016066) #7 Cdh12 (MGP_PahariEiJ_G0016067) #9 Cdh18 (MGP_PahariEiJ_G0016068) #10 MGP_PahariEiJ_G0016069 Basp1 (MGP_PahariEiJ_G0016070) MGP_PahariEiJ_G0016071 Myo10 (MGP_PahariEiJ_G0016072) #11 Retreg1 (MGP_PahariEiJ_G0016073) #12 Zfp622 (MGP_PahariEiJ_G0016074) #13 Marchf11 (MGP_PahariEiJ_G0016075) #14 Fbxl7 (MGP_PahariEiJ_G0016076) #15 Ank (MGP_PahariEiJ_G0016077) #17 Otulin (MGP_PahariEiJ_G0016078) #18 Otulinl (MGP_PahariEiJ_G0016079) #19 Trio (MGP_PahariEiJ_G0016080) #21 Dnah5 (MGP_PahariEiJ_G0016081) #22 Ctnnd2 (MGP_PahariEiJ_G0016082) #24 Dap (MGP_PahariEiJ_G0016083) #25 Ankrd33b (MGP_PahariEiJ_G0016084) #26 Ropn1l (MGP_PahariEiJ_G0016085) #27 Marchf6 (MGP_PahariEiJ_G0016086) #28 Cmbl (MGP_PahariEiJ_G0016087) #29 MGP_PahariEiJ_G0016088 #30 Atpsckmt (MGP_PahariEiJ_G0016089) #31 Tas2r119 (MGP_PahariEiJ_G0016090) #32 MGP_PahariEiJ_G0016091 #33 Rat MODERN SPECIES 11 AABR07008724.1 (ENSRNOG00000019037) ENSRNOG00000068483 Cdh18 (ENSRNOG00000010535) #10 Basp1 (ENSRNOG00000066065) Cwc15-ps3 (ENSRNOG00000025157) Myo10 (ENSRNOG00000010161) #11 Zfp622 (ENSRNOG00000010589) #13 AABR07008911.1 (ENSRNOG00000056969) Marchf11 (ENSRNOG00000024461) #14 Fbxl7 (ENSRNOG00000024433) #15 Ankh (ENSRNOG00000010960) #17 Otulin (ENSRNOG00000012017) #18 AABR07008940.1 (ENSRNOG00000011997) Otulinl (ENSRNOG00000012109) #19 Trio (ENSRNOG00000012148) #21 Dnah5 (ENSRNOG00000048363) #22 Ctnnd2 (ENSRNOG00000010649) #24 Dap (ENSRNOG00000010747) Ankrd33b (ENSRNOG00000010888) #26 Ropn1l (ENSRNOG00000042781) #27 Marchf6 (ENSRNOG00000011066) #28 Cmbl (ENSRNOG00000011260) #29 Cct5 (ENSRNOG00000011632) #30 Atpsckmt (ENSRNOG00000022347) #31 Tas2r119 (ENSRNOG00000011963) #32 Sema5a (ENSRNOG00000011977) #33 LOC108350175 (ENSRNOG00000068153) #34 LOC100909688 (ENSRNOG00000049662) ##36 ENSRNOG00000065249 ENSRNOG00000066460 AABR07009105.1 (ENSRNOG00000053325) Upper Galilee mountains blind mole rat MODERN SPECIES 1778 Cdh18 (ENSNGAG00000022603) #10 Basp1 (ENSNGAG00000001116) ENSNGAG00000004229 Myo10 (ENSNGAG00000013287) #11 Retreg1 (ENSNGAG00000011943) #12 Zfp622 (ENSNGAG00000012958) #13 Marchf11 (ENSNGAG00000016639) #14 Fbxl7 (ENSNGAG00000018840) #15 ENSNGAG00000020279 Ank (ENSNGAG00000021196) #17 Otulin (ENSNGAG00000021789) #18 Otulinl (ENSNGAG00000022804) #19 ENSNGAG00000007346 Trio (ENSNGAG00000022178) #21 Dnah5 (ENSNGAG00000000799) #22 Lesser Egyptian jerboa MODERN SPECIES 48 Cdh10 (ENSJJAG00000013847) #7 ENSJJAG00000011202 ENSJJAG00000014686 ENSJJAG00000014963 Cdh12 (ENSJJAG00000018602) #9 Cdh18 (ENSJJAG00000018092) #10 Myo10 (ENSJJAG00000013696) #11 Retreg1 (ENSJJAG00000007779) #12 Zfp622 (ENSJJAG00000000941) #13 ENSJJAG00000019583 Fbxl7 (ENSJJAG00000013915) #15 Ank (ENSJJAG00000010626) #17 Otulin (ENSJJAG00000021711) #18 Otulinl (ENSJJAG00000019612) #19 Trio (ENSJJAG00000019719) #21 Dnah5 (ENSJJAG00000021504) #22 Ctnnd2 (ENSJJAG00000015243) #24 ENSJJAG00000014543 Dap (ENSJJAG00000022373) #25 Ankrd33b (ENSJJAG00000016371) #26 Prr16 (ENSJJAG00000016970) ENSJJAG00000006199 ENSJJAG00000016100 Fam170a (ENSJJAG00000003910) Smim3 (ENSJJAG00000011996) Dctn4 (ENSJJAG00000021369) Rbm22 (ENSJJAG00000009565) Myoz3 (ENSJJAG00000023711) Synpo (ENSJJAG00000022414) Ndst1 (ENSJJAG00000014514) ENSJJAG00000015678 Kangaroo rat MODERN SPECIES 340 ENSDORG00000028346 Cdh9 (ENSDORG00000002684) Cdh10 (ENSDORG00000007213) #7 ENSDORG00000001664 Cdh18 (ENSDORG00000009490) #10 ENSDORG00000026313 Myo10 (ENSDORG00000005883) #11 Retreg1 (ENSDORG00000000940) #12 Zfp622 (ENSDORG00000000939) #13 Marchf11 (ENSDORG00000007351) #14 Fbxl7 (ENSDORG00000030041) #15 Ank (ENSDORG00000001662) #17 Otulin (ENSDORG00000003904) #18 Otulinl (ENSDORG00000003148) #19 Trio (ENSDORG00000011919) #21 Dnah5 (ENSDORG00000012492) #22 ENSDORG00000029046 ENSDORG00000028473 #24 Dap (ENSDORG00000023386) #25 Ropn1l (ENSDORG00000004133) #27 Marchf6 (ENSDORG00000009942) #28 Cmbl (ENSDORG00000008783) #29 Cct5 (ENSDORG00000008787) #30 Sema5a (ENSDORG00000009214) #33 ENSDORG00000030090 Fastkd3 (ENSDORG00000028341) Cfap90 (ENSDORG00000013670) Adcy2 (ENSDORG00000010924) Tent4a (ENSDORG00000023216) Srd5a1 (ENSDORG00000010248) Nsun2 (ENSDORG00000010247) Rodentia_A ANCESTRAL SPECIES 7 ENSGT00940000154673.a ENSGT00940000160496.b ENSGT00940000154187.a.a #7 ENSGT00940000154187.a.b #9 ENSGT00940000157512 #10 ENSGT00730000111450 ENSGT00940000155469 #11 ENSGT00940000160746 #12 ENSGT00390000018047 #13 ENSGT00940000160025 #14 ENSGT00940000158009 #15 ENSGT00390000012189 #17 ENSGT00390000009802.b #18 ENSGT00390000009802.a #19 ENSGT00940000154766.a.a #21 ENSGT00940000155533.d #22 ENSGT00940000154952.a.b #24 ENSGT00940000154574.c #25 ENSGT00500000044852.a #26 ENSGT00390000012731.a.a #27 ENSGT00940000155171.a.b #28 ENSGT00390000000183 #29 ENSGT00550000074988 #30 ENSGT00390000014771.a #31 ENSGT01100000263477.E #32 ENSGT00940000158036 #33 ENSGT00940000155822 ENSGT01030000234607.A.a.a.a ENSGT00390000015121 ENSGT00940000156424 ENSGT00940000157811 Hystricomorpha ANCESTRAL SPECIES 31 ENSGT00940000154673.a ENSGT00940000160496.b ENSGT00940000154187.a.a #7 ENSGT00940000154187.a.b #9 ENSGT00940000157512 #10 ENSGT00730000111450 ENSGT00940000155469 #11 ENSGT00940000160746 #12 ENSGT00390000018047 #13 ENSGT00940000160025 #14 ENSGT00940000158009 #15 ENSGT00390000012189 #17 ENSGT00390000009802.b #18 ENSGT00390000009802.a #19 ENSGT00940000154766.a.a #21 ENSGT00940000155533.d #22 ENSGT00940000154952.a.b #24 ENSGT00940000154574.c #25 ENSGT00500000044852.a #26 ENSGT00390000012731.a.a #27 ENSGT00940000155171.a.b #28 ENSGT00390000000183 #29 ENSGT00550000074988 #30 ENSGT00390000014771.a #31 ENSGT01100000263477.E #32 ENSGT00940000158036 #33 ENSGT00940000155822 ENSGT01030000234607.A.a.a.a ENSGT00390000015121 ENSGT00940000156424 ENSGT00940000157811 Hystricomorpha_a ANCESTRAL SPECIES 29 ENSGT00940000154673.a ENSGT00940000160496.b ENSGT00940000154187.a.a #7 ENSGT00940000154187.a.b #9 ENSGT00940000157512 #10 ENSGT00730000111450 ENSGT00940000155469 #11 ENSGT00940000160746 #12 ENSGT00390000018047 #13 ENSGT00940000160025 #14 ENSGT00940000158009 #15 ENSGT00390000012189 #17 ENSGT00390000009802.b #18 ENSGT00390000009802.a #19 ENSGT00940000154766.a.a #21 ENSGT00940000155533.d #22 ENSGT00940000154952.a.b #24 ENSGT00940000154574.c #25 ENSGT00500000044852.a #26 ENSGT00390000012731.a.a #27 ENSGT00940000155171.a.b #28 ENSGT00390000000183 #29 ENSGT00550000074988 #30 ENSGT00390000014771.a #31 ENSGT01100000263477.E #32 ENSGT00940000158036 #33 ENSGT00940000155822 ENSGT01030000234607.A.a.a.a ENSGT00390000015121 ENSGT00940000156424 ENSGT00940000157811 Hystricomorpha_b ANCESTRAL SPECIES 60 ENSGT00940000154673.a ENSGT00940000160496.b ENSGT00940000154187.a.a #7 ENSGT00940000154187.a.b #9 ENSGT00940000157512 #10 ENSGT00730000111450 ENSGT00940000155469 #11 ENSGT00940000160746 #12 ENSGT00390000018047 #13 ENSGT00940000160025 #14 ENSGT00940000158009 #15 ENSGT00390000012189 #17 ENSGT00390000009802.b #18 ENSGT00390000009802.a #19 ENSGT00940000154766.a.a #21 ENSGT00940000155533.d #22 ENSGT00940000154952.a.b #24 ENSGT00940000154574.c #25 ENSGT00500000044852.a #26 ENSGT00390000012731.a.a #27 ENSGT00940000155171.a.b #28 ENSGT00390000000183 #29 ENSGT00550000074988 #30 ENSGT00390000014771.a #31 ENSGT00940000158036 #33 ENSGT00940000155822 ENSGT01030000234607.A.a.a.a ENSGT00390000015121 ENSGT00940000156424 ENSGT00940000157811 ENSGT00950000182886.b.b Long-tailed chinchilla MODERN SPECIES 133 CDH6 (ENSCLAG00000007448) CDH9 (ENSCLAG00000008482) CDH10 (ENSCLAG00000011884) #7 CDH12 (ENSCLAG00000013527) #9 CDH18 (ENSCLAG00000011951) #10 BASP1 (ENSCLAG00000015086) MYO10 (ENSCLAG00000014503) #11 RETREG1 (ENSCLAG00000014211) #12 ZNF622 (ENSCLAG00000011494) #13 MARCHF11 (ENSCLAG00000010027) #14 FBXL7 (ENSCLAG00000014128) #15 ANKH (ENSCLAG00000011007) #17 OTULIN (ENSCLAG00000012182) #18 OTULINL (ENSCLAG00000015072) #19 TRIO (ENSCLAG00000009822) #21 DNAH5 (ENSCLAG00000013894) #22 CTNND2 (ENSCLAG00000010220) #24 DAP (ENSCLAG00000008486) #25 ANKRD33B (ENSCLAG00000008394) #26 ROPN1L (ENSCLAG00000007892) #27 MARCHF6 (ENSCLAG00000013772) #28 CMBL (ENSCLAG00000012029) #29 CCT5 (ENSCLAG00000008074) #30 ATPSCKMT (ENSCLAG00000007449) #31 ENSCLAG00000009724 Degu MODERN SPECIES 51 ENSODEG00000015179 ENSODEG00000015684 NOC3L (ENSODEG00000015822) PLCE1 (ENSODEG00000016086) ENSODEG00000015694 SLC35G1 (ENSODEG00000016132) ENSODEG00000015909 LGI1 (ENSODEG00000015911) ENSODEG00000014890 FRA10AC1 (ENSODEG00000016002) PDE6C (ENSODEG00000015159) RBP4 (ENSODEG00000015640) FFAR4 (ENSODEG00000016129) CEP55 (ENSODEG00000015163) ENSODEG00000015511 DNAH5 (ENSODEG00000015643) #22 Guinea pig MODERN SPECIES 55 CDH18 (ENSCPOG00000015587) #10 BASP1 (ENSCPOG00000040611) MYO10 (ENSCPOG00000004645) #11 RETREG1 (ENSCPOG00000002278) #12 ZNF622 (ENSCPOG00000002276) #13 MARCHF11 (ENSCPOG00000026502) #14 FBXL7 (ENSCPOG00000013129) #15 ANKH (ENSCPOG00000012339) #17 OTULIN (ENSCPOG00000012126) #18 OTULINL (ENSCPOG00000008574) #19 TRIO (ENSCPOG00000009097) #21 DNAH5 (ENSCPOG00000015078) #22 CTNND2 (ENSCPOG00000023221) #24 ENSCPOG00000040408 #25 ROPN1L (ENSCPOG00000032598) #27 MARCHF6 (ENSCPOG00000000213) #28 CMBL (ENSCPOG00000002024) #29 CCT5 (ENSCPOG00000002023) #30 ATPSCKMT (ENSCPOG00000002022) #31 ENSCPOG00000039180 #32 ENSCPOG00000038189 #32 ENSCPOG00000005307 #32 ENSCPOG00000009427 #32 ENSCPOG00000004094 SEMA5A (ENSCPOG00000006362) #33 MTRR (ENSCPOG00000006609) FASTKD3 (ENSCPOG00000006606) Naked mole-rat female MODERN SPECIES 7 ENSHGLG00000040982 ENSHGLG00000041373 MYO10 (ENSHGLG00000006481) #11 RETREG1 (ENSHGLG00000033002) #12 ZNF622 (ENSHGLG00000040123) #13 ENSHGLG00000042572 ENSHGLG00000047002 #14 ENSHGLG00000005413 FBXL7 (ENSHGLG00000039624) #15 ENSHGLG00000049744 ANKH (ENSHGLG00000009005) #17 OTULIN (ENSHGLG00000008326) #18 ENSHGLG00000040674 OTULINL (ENSHGLG00000007364) #19 ENSHGLG00000004346 #21 ENSHGLG00000004104 #22 ENSHGLG00000034661 ENSHGLG00000017230 ENSHGLG00000034637 ENSHGLG00000032946 ENSHGLG00000007547 #24 ENSHGLG00000015867 ANKRD33B (ENSHGLG00000036584) #26 ENSHGLG00000004654 #27 MARCHF6 (ENSHGLG00000003823) #28 CMBL (ENSHGLG00000044949) #29 CCT5 (ENSHGLG00000015664) #30 ATPSCKMT (ENSHGLG00000033623) #31 ENSHGLG00000036712 ENSHGLG00000039033 ENSHGLG00000039099 #32 Sciuridae ANCESTRAL SPECIES 32 ENSGT00940000154673.a ENSGT00940000160496.b ENSGT00940000154187.a.a #7 ENSGT00940000154187.a.b #9 ENSGT00940000157512 #10 ENSGT00730000111450 ENSGT00940000155469 #11 ENSGT00940000160746 #12 ENSGT00390000018047 #13 ENSGT00940000160025 #14 ENSGT00940000158009 #15 ENSGT00390000012189 #17 ENSGT00390000009802.b #18 ENSGT00390000009802.a #19 ENSGT00940000154766.a.a #21 ENSGT00940000155533.d #22 ENSGT00940000154952.a.b #24 ENSGT00940000154574.c #25 ENSGT00500000044852.a #26 ENSGT00390000012731.a.a #27 ENSGT00940000155171.a.b #28 ENSGT00390000000183 #29 ENSGT00550000074988 #30 ENSGT00390000014771.a #31 ENSGT01100000263477.E #32 ENSGT00940000158036 #33 ENSGT00940000155822 ENSGT01030000234607.A.a.a.a ENSGT00390000015121 ENSGT00940000156424 ENSGT00940000157811 Marmotini ANCESTRAL SPECIES 75 ENSGT00940000160025 #14 ENSGT00940000158009 #15 ENSGT00390000012189 #17 ENSGT00390000009802.b #18 ENSGT00390000009802.a #19 ENSGT00940000154766.a.a #21 ENSGT00940000155533.d #22 ENSGT00940000154952.a.b #24 ENSGT00940000154574.c #25 ENSGT00500000044852.a #26 ENSGT00390000012731.a.a #27 ENSGT00940000155171.a.b #28 ENSGT00390000000183 #29 ENSGT00550000074988 #30 ENSGT00390000014771.a #31 ENSGT01100000263477.E #32 ENSGT00940000158036 #33 ENSGT00940000155822 ENSGT01030000234607.A.a.a.a ENSGT00390000015121 ENSGT00940000156424 ENSGT00940000157811 Marmotini_b ANCESTRAL SPECIES 157 ENSGT00940000160025 #14 ENSGT00940000158009 #15 ENSGT00390000012189 #17 ENSGT00390000009802.b #18 ENSGT00390000009802.a #19 ENSGT00940000154766.a.a #21 ENSGT00940000155533.d #22 ENSGT00940000154952.a.b #24 ENSGT00940000154574.c #25 ENSGT00500000044852.a #26 ENSGT00390000012731.a.a #27 ENSGT00940000155171.a.b #28 ENSGT00390000000183 #29 ENSGT00550000074988 #30 ENSGT00390000014771.a #31 ENSGT01100000263477.E #32 ENSGT00940000158036 #33 ENSGT00940000155822 ENSGT01030000234607.A.a.a.a ENSGT00390000015121 ENSGT00940000156424 ENSGT00940000157811 Arctic ground squirrel MODERN SPECIES 101 MARCHF11 (ENSUPAG00010018880) #14 FBXL7 (ENSUPAG00010018865) #15 ENSUPAG00010018857 ANKH (ENSUPAG00010018838) #17 OTULIN (ENSUPAG00010018826) #18 OTULINL (ENSUPAG00010018805) #19 TRIO (ENSUPAG00010018613) #21 DNAH5 (ENSUPAG00010018491) #22 CTNND2 (ENSUPAG00010018407) #24 Squirrel MODERN SPECIES 265 MARCHF11 (ENSSTOG00000015947) #14 FBXL7 (ENSSTOG00000026709) #15 ANKH (ENSSTOG00000014630) #17 OTULIN (ENSSTOG00000014627) #18 OTULINL (ENSSTOG00000012967) #19 TRIO (ENSSTOG00000012982) #21 DNAH5 (ENSSTOG00000012887) #22 Alpin marmot MODERN SPECIES 27 MROH2B (ENSMMMG00000017369) C6 (ENSMMMG00000017358) PLCXD3 (ENSMMMG00000017352) ENSMMMG00000017300 RIMOC1 (ENSMMMG00000017296) FBXO4 (ENSMMMG00000017291) GHR (ENSMMMG00000017240) CCDC152 (ENSMMMG00000017224) ENSMMMG00000017221 FBXL7 (ENSMMMG00000017213) #15 ANKH (ENSMMMG00000017192) #17 OTULIN (ENSMMMG00000017186) #18 OTULINL (ENSMMMG00000017171) #19 ENSMMMG00000017138 #21 ENSMMMG00000017112 #21 DNAH5 (ENSMMMG00000017061) #22 ENSMMMG00000017037 ENSMMMG00000017027 CTNND2 (ENSMMMG00000016961) #24 DAP (ENSMMMG00000016933) #25 ANKRD33B (ENSMMMG00000016918) #26 ROPN1L (ENSMMMG00000016907) #27 MARCHF6 (ENSMMMG00000016892) #28 CMBL (ENSMMMG00000016882) #29 CCT5 (ENSMMMG00000016876) #30 ATPSCKMT (ENSMMMG00000016857) #31 TAS2R1 (ENSMMMG00000016854) #32 SEMA5A (ENSMMMG00000016842) #33 ENSMMMG00000016828 MTRR (ENSMMMG00000016810) FASTKD3 (ENSMMMG00000016807) Eurasian red squirrel MODERN SPECIES 15 ENSSVLG00005004196 ENSSVLG00005004221 CDH18 (ENSSVLG00005004254) #10 ENSSVLG00005004307 ENSSVLG00005004321 MYO10 (ENSSVLG00005004378) #11 RETREG1 (ENSSVLG00005004440) #12 ZNF622 (ENSSVLG00005004487) #13 MARCHF11 (ENSSVLG00005004512) #14 FBXL7 (ENSSVLG00005004530) #15 ANKH (ENSSVLG00005004559) #17 OTULIN (ENSSVLG00005004587) #18 OTULINL (ENSSVLG00005004612) #19 ENSSVLG00005004640 #21 ENSSVLG00005004695 #21 DNAH5 (ENSSVLG00005004822) #22 CTNND2 (ENSSVLG00005005089) #24 DAP (ENSSVLG00005005317) #25 ANKRD33B (ENSSVLG00005005329) #26 ROPN1L (ENSSVLG00005005364) #27 ENSSVLG00005005490 ##28 ENSSVLG00005005507 CMBL (ENSSVLG00005005537) #29 ENSSVLG00005005577 #30 ATPSCKMT (ENSSVLG00005005707) #31 ENSSVLG00005005790 TAS2R1 (ENSSVLG00005005821) #32 SEMA5A (ENSSVLG00005005842) #33 MTRR (ENSSVLG00005005871) FASTKD3 (ENSSVLG00005005935) CFAP90 (ENSSVLG00005005976) Lagomorpha ANCESTRAL SPECIES 125 ENSGT00940000154673.a ENSGT00940000160496.b ENSGT00940000154187.a.a #7 ENSGT00940000154187.a.b #9 ENSGT00940000157512 #10 ENSGT00730000111450 ENSGT00940000155469 #11 ENSGT00940000160746 #12 ENSGT00390000018047 #13 ENSGT00940000160025 #14 ENSGT00940000158009 #15 ENSGT00390000012189 #17 ENSGT00390000009802.b #18 ENSGT00390000009802.a #19 ENSGT00940000154766.a.a #21 ENSGT00940000155533.d #22 ENSGT00940000154952.a.b #24 ENSGT01050000246290 ENSGT00500000044852.a #26 ENSGT00390000012731.a.a #27 ENSGT00940000155171.a.b #28 ENSGT00390000000183 #29 ENSGT00550000074988 #30 ENSGT00390000014771.a #31 Rabbit MODERN SPECIES 2 ENSOCUG00000024067 BASP1 (ENSOCUG00000039590) MYO10 (ENSOCUG00000017519) #11 RETREG1 (ENSOCUG00000017516) #12 ZNF622 (ENSOCUG00000017508) #13 MARCHF11 (ENSOCUG00000004408) #14 ENSOCUG00000035790 FBXL7 (ENSOCUG00000004406) #15 ENSOCUG00000025979 ENSOCUG00000022356 ANKH (ENSOCUG00000012051) #17 OTULIN (ENSOCUG00000012048) #18 OTULINL (ENSOCUG00000017585) #19 ENSOCUG00000029747 TRIO (ENSOCUG00000012986) #21 DNAH5 (ENSOCUG00000010205) #22 ENSOCUG00000027984 ENSOCUG00000036713 ENSOCUG00000035464 CTNND2 (ENSOCUG00000012709) #24 ENSOCUG00000010666 ANKRD33B (ENSOCUG00000002595) #26 ROPN1L (ENSOCUG00000005753) #27 MARCHF6 (ENSOCUG00000005741) #28 CMBL (ENSOCUG00000006084) #29 CCT5 (ENSOCUG00000021231) #30 ATPSCKMT (ENSOCUG00000025588) #31 RACK1 (ENSOCUG00000023680) ENSOCUG00000003237 TRIM7 (ENSOCUG00000003233) ENSOCUG00000027926 Pika MODERN SPECIES 557 DNAH5 (ENSOPRG00000004192) #22 Tree shrew MODERN SPECIES 5363 ANKH (ENSTBEG00000000792) #17 OTULIN (ENSTBEG00000009314) #18 ENSTBEG00000009023 TRIO (ENSTBEG00000005852) #21 DNAH5 (ENSTBEG00000000652) #22 Primates ANCESTRAL SPECIES 8 ENSGT00940000160496.b ENSGT00940000154187.a.a #7 ENSGT00940000154187.a.b #9 ENSGT00940000157512 #10 ENSGT00730000111450 ENSGT00940000155469 #11 ENSGT00940000160746 #12 ENSGT00390000018047 #13 ENSGT00940000160025 #14 ENSGT00940000158009 #15 ENSGT00390000012189 #17 ENSGT00390000009802.b #18 ENSGT00390000009802.a #19 ENSGT00940000166969.b ENSGT00940000154766.a.a #21 ENSGT00940000155533.d #22 ENSGT00940000154952.a.b #24 ENSGT00940000154574.c #25 ENSGT00500000044852.a #26 ENSGT00390000012731.a.a #27 ENSGT00940000155171.a.b #28 ENSGT00390000000183 #29 ENSGT00550000074988 #30 ENSGT00390000014771.a #31 ENSGT01100000263477.E #32 ENSGT00940000158036 #33 ENSGT00940000155822 ENSGT01030000234607.A.a.a.a ENSGT00390000015121 ENSGT00910000148650 ENSGT00940000156424 Haplorrhini ANCESTRAL SPECIES 4 ENSGT00940000154187.a.a #7 ENSGT00940000154187.a.b #9 ENSGT00940000157512 #10 ENSGT00390000013228.e.b ENSGT00730000111450 ENSGT00940000155469 #11 ENSGT00940000160746 #12 ENSGT00390000018047 #13 ENSGT00940000160025 #14 ENSGT00940000158009 #15 ENSGT00390000012189 #17 ENSGT00390000009802.b #18 ENSGT00390000009802.a #19 ENSGT00940000166969.b ENSGT00940000154766.a.a #21 ENSGT00940000155533.d #22 ENSGT00940000154952.a.b #24 ENSGT00940000154574.c #25 ENSGT00500000044852.a #26 ENSGT00390000012731.a.a #27 ENSGT00940000155171.a.b #28 ENSGT00390000000183 #29 ENSGT00550000074988 #30 ENSGT00390000014771.a #31 ENSGT01100000263477.E #32 ENSGT00940000158036 #33 ENSGT00940000155822 ENSGT01030000234607.A.a.a.a ENSGT00390000015121 ENSGT00910000148650 ENSGT00940000156424 Simiiformes ANCESTRAL SPECIES 6 ENSGT00940000154187.a.a #7 ENSGT00940000154187.a.b #9 ENSGT00940000157512 #10 ENSGT00390000013228.e.b ENSGT00730000111450 ENSGT00940000155469 #11 ENSGT00940000160746 #12 ENSGT00390000018047 #13 ENSGT00940000160025 #14 ENSGT00940000158009 #15 ENSGT00390000012189 #17 ENSGT00390000009802.b #18 ENSGT00390000009802.a #19 ENSGT00940000154766.a.a #21 ENSGT00910000148358 ENSGT00940000155533.d #22 ENSGT00940000154952.a.b #24 ENSGT00940000154574.c #25 ENSGT00500000044852.a #26 ENSGT00390000012731.a.a #27 ENSGT00940000155171.a.b #28 ENSGT00390000000183 #29 ENSGT00550000074988 #30 ENSGT00390000014771.a #31 ENSGT01100000263477.E #32 ENSGT00940000158036 #33 ENSGT00940000155822 ENSGT01030000234607.A.a.a.a ENSGT00390000015121 ENSGT00910000148650 ENSGT00940000156424 Catarrhini ANCESTRAL SPECIES 7 ENSGT00940000157512 #10 ENSGT01100000263504.b ENSGT00390000013228.e.b ENSGT00730000111450 ENSGT00940000155469 #11 ENSGT00940000160746 #12 ENSGT00390000018047 #13 ENSGT00940000160025 #14 ENSGT00940000158009 #15 ENSGT00390000012189 #17 ENSGT00860000135740 ENSGT00390000009802.b #18 ENSGT00390000009802.a #19 ENSGT00940000154766.a.a #21 ENSGT00910000148358 ENSGT00940000155533.d #22 ENSGT00940000154952.a.b #24 ENSGT00940000154574.c #25 ENSGT00500000044852.a #26 ENSGT00390000012138.a.a.j.b ##20 ENSGT00390000012731.a.a #27 ENSGT00940000155171.a.b #28 ENSGT00390000000183 #29 ENSGT00550000074988.u.b #30 ENSGT00390000014771.a #31 ENSGT01100000263477.E #32 ENSGT00940000158036 #33 ENSGT00940000155822 ENSGT01030000234607.A.a.a.a ENSGT00390000015121 ENSGT00910000148650 Hominoidea ANCESTRAL SPECIES 8 ENSGT01100000263504.b ENSGT00390000013228.e.b.i.a ENSGT00390000013228.e.b.j ENSGT00730000111450 ENSGT00940000155469 #11 ENSGT00940000160746 #12 ENSGT00390000018047 #13 ENSGT00940000160025 #14 ENSGT00940000158009 #15 ENSGT00390000012189 #17 ENSGT00860000135740 ENSGT00390000009802.b #18 ENSGT00390000009802.a #19 ENSGT00940000154766.a.a #21 ENSGT00910000148085 ENSGT00940000155533.d #22 ENSGT00940000154952.a.b #24 ENSGT00940000154574.c #25 ENSGT00500000044852.a #26 ENSGT00390000012138.a.a.j.b ##20 ENSGT00390000012731.a.a #27 ENSGT00940000155171.a.b #28 ENSGT00390000000183 #29 ENSGT00550000074988.u.b #30 ENSGT00390000014771.a #31 ENSGT01100000263477.E #32 ENSGT00940000158036 #33 ENSGT00940000155822 ENSGT01030000234607.A.a.a.a ENSGT00390000015121 ENSGT00940000156424 Hominidae ANCESTRAL SPECIES 7 ENSGT00390000013228.e.b.i.b ENSGT01100000263504.b.p ENSGT00390000013228.e.b.j ENSGT00730000111450 ENSGT00940000155469 #11 ENSGT00940000160746 #12 ENSGT00390000018047 #13 ENSGT00940000160025 #14 ENSGT00940000158009 #15 ENSGT00390000012189 #17 ENSGT00860000135740 ENSGT00390000009802.b #18 ENSGT00390000009802.a #19 ENSGT00940000154766.a.a #21 ENSGT00910000148085 ENSGT00940000155533.d #22 ENSGT00940000154952.a.b #24 ENSGT00940000154574.c #25 ENSGT00500000044852.a #26 ENSGT00390000012138.a.a.j.b ##20 ENSGT00390000012731.a.a #27 ENSGT00940000155171.a.b #28 ENSGT00390000000183 #29 ENSGT00550000074988.u.b #30 ENSGT00390000014771.a #31 ENSGT01100000263477.E #32 ENSGT00940000158036 #33 ENSGT00940000155822 ENSGT01030000234607.A.a.a.a ENSGT00390000015121 ENSGT00940000156424 Homo/Pan/Gorilla group ANCESTRAL SPECIES 7 ENSGT01100000263504.b.o ENSGT00390000013228.e.b.i.a.a.a ENSGT00950000182841.b.a.a.b.a.a.b.b.a.b.d.a.b.b ENSGT00730000111450 ENSGT00940000155469 #11 ENSGT00940000160746 #12 ENSGT00390000018047 #13 ENSGT00940000160025 #14 ENSGT00940000158009 #15 ENSGT00390000012189 #17 ENSGT00860000135740 ENSGT00390000009802.b #18 ENSGT00390000009802.a #19 ENSGT00940000154766.a.a #21 ENSGT00910000148085 ENSGT00940000155533.d #22 ENSGT00940000154952.a.b #24 ENSGT00940000154574.c #25 ENSGT00500000044852.a #26 ENSGT00390000012138.a.a.j.b ##20 ENSGT00390000012731.a.a #27 ENSGT00940000155171.a.b #28 ENSGT00390000000183 #29 ENSGT00550000074988.u.b #30 ENSGT00390000014771.a #31 ENSGT01100000263477.E #32 ENSGT00940000158036 #33 ENSGT00940000155822 ENSGT01030000234607.A.a.a.a ENSGT00390000015121 ENSGT00940000156424 Homo/Pan group ANCESTRAL SPECIES 8 ENSGT00940000157512 #10 ENSGT01100000263504.b.o ENSGT00390000013228.e.b.i.a.a.a ENSGT00950000182841.b.a.a.b.a.a.b.b.a.b.d.a.b.b ENSGT00730000111450 ENSGT00940000155469 #11 ENSGT00940000160746 #12 ENSGT00390000018047 #13 ENSGT00940000160025 #14 ENSGT00940000158009 #15 ENSGT00390000012189 #17 ENSGT00390000009802.b #18 ENSGT00390000009802.a #19 ENSGT00940000154766.a.a #21 ENSGT00910000148085 ENSGT00940000155533.d #22 ENSGT00940000154952.a.b.o #24 ENSGT00940000154574.c #25 ENSGT00500000044852.a #26 ENSGT00390000012138.a.a.j.b ##20 ENSGT00390000012731.a.a #27 ENSGT00940000155171.a.b #28 ENSGT00390000000183 #29 ENSGT00550000074988.u.b #30 ENSGT00390000014771.a #31 ENSGT01100000263477.E #32 ENSGT00940000158036 #33 ENSGT00940000155822 ENSGT01030000234607.A.a.a.a ENSGT00390000015121 ENSGT00940000156424 Pan ANCESTRAL SPECIES 21 ENSGT00730000111450 ENSGT00940000155469 #11 ENSGT00940000160746 #12 ENSGT00390000018047 #13 ENSGT00940000160025 #14 ENSGT00940000158009 #15 ENSGT00940000153375.kb.b ENSGT00910000147847 ENSGT00860000135740 ENSGT00390000012189 #17 ENSGT00390000009802.b #18 ENSGT00950000183029.B.c.b.b.b ENSGT00390000009802.a #19 ENSGT00940000154766.a.a #21 ENSGT00910000148085 ENSGT00940000155533.d #22 ENSGT00390000007084.c.a.d.c.a.b.b ENSGT00940000154952.a.b.p #24 ENSGT00910000148267 ENSGT00940000154952.a.b.o #24 ENSGT00940000154574.c #25 ENSGT00500000044852.a #26 ENSGT00390000012138.a.a.j.b ##20 ENSGT00390000012731.a.a #27 ENSGT00940000155171.a.b #28 ENSGT00390000000183 #29 ENSGT00550000074988.u.b #30 ENSGT00390000014771.a #31 ENSGT01100000263477.E #32 ENSGT00940000158036 #33 ENSGT00940000155822 Chimpanzee MODERN SPECIES 18 BASP1 (ENSPTRG00000044904) MYO10 (ENSPTRG00000016745) #11 RETREG1 (ENSPTRG00000016744) #12 ZNF622 (ENSPTRG00000016743) #13 MARCHF11 (ENSPTRG00000016742) #14 FBXL7 (ENSPTRG00000016741) #15 ENSPTRG00000052184 ENSPTRG00000043268 ANKH (ENSPTRG00000016739) #17 OTULIN (ENSPTRG00000016738) #18 ENSPTRG00000051935 ENSPTRG00000045231 OTULINL (ENSPTRG00000045722) #19 ENSPTRG00000043022 TRIO (ENSPTRG00000016735) #21 DNAH5 (ENSPTRG00000016734) #22 ENSPTRG00000044329 CTNND2 (ENSPTRG00000016731) #24 ENSPTRG00000040212 #25 ANKRD33B (ENSPTRG00000016729) #26 ROPN1L (ENSPTRG00000016728) #27 MARCHF6 (ENSPTRG00000016727) #28 CMBL (ENSPTRG00000045109) #29 CCT5 (ENSPTRG00000016725) #30 ATPSCKMT (ENSPTRG00000016724) #31 TAS2R1 (ENSPTRG00000016723) #32 SEMA5A (ENSPTRG00000016722) #33 MTRR (ENSPTRG00000016721) FASTKD3 (ENSPTRG00000016720) CFAP90 (ENSPTRG00000034032) ADCY2 (ENSPTRG00000049665) Bonobo MODERN SPECIES 18 ENSPPAG00000035828 #12 ZNF622 (ENSPPAG00000028322) #13 ENSPPAG00000016393 #14 FBXL7 (ENSPPAG00000020751) #15 ENSPPAG00000016923 ENSPPAG00000040662 ENSPPAG00000015929 ENSPPAG00000021833 ANKH (ENSPPAG00000029143) #17 OTULIN (ENSPPAG00000031497) #18 ENSPPAG00000031191 ENSPPAG00000033437 OTULINL (ENSPPAG00000012785) #19 ENSPPAG00000041606 TRIO (ENSPPAG00000042679) #21 DNAH5 (ENSPPAG00000038258) #22 ENSPPAG00000025352 ENSPPAG00000036981 #24 ENSPPAG00000033743 ENSPPAG00000033895 #24 ENSPPAG00000042372 ENSPPAG00000014499 #26 ENSPPAG00000037114 ##20 ROPN1L (ENSPPAG00000027569) #27 MARCHF6 (ENSPPAG00000036651) #28 CMBL (ENSPPAG00000033069) #29 CCT5 (ENSPPAG00000029058) #30 ATPSCKMT (ENSPPAG00000042235) #31 TAS2R1 (ENSPPAG00000010439) #32 SEMA5A (ENSPPAG00000043389) #33 MTRR (ENSPPAG00000043987) Human MODERN SPECIES 17 TAF11L4 (ENSG00000284283) TAF11L3 (ENSG00000284439) TAF11L2 (ENSG00000284373) H3Y2 (ENSG00000268799) LINC02218 (ENSG00000249662) BASP1 (ENSG00000176788) MYO10 (ENSG00000145555) #11 RETREG1 (ENSG00000154153) #12 ZNF622 (ENSG00000173545) #13 MARCHF11 (ENSG00000183654) #14 FBXL7 (ENSG00000183580) #15 ANKH (ENSG00000154122) #17 OTULIN (ENSG00000154124) #18 OTULINL (ENSG00000145569) #19 TRIO (ENSG00000038382) #21 DNAH5 (ENSG00000039139) #22 CTNND2 (ENSG00000169862) #24 DAP (ENSG00000112977) #25 ANKRD33B (ENSG00000164236) #26 ROPN1L (ENSG00000145491) #27 MARCHF6 (ENSG00000145495) #28 CMBL (ENSG00000164237) #29 CCT5 (ENSG00000150753) #30 ATPSCKMT (ENSG00000150756) #31 TAS2R1 (ENSG00000169777) #32 SEMA5A (ENSG00000112902) #33 FASTKD3 (ENSG00000124279) MTRR (ENSG00000124275) CFAP90 (ENSG00000215217) ADCY2 (ENSG00000078295) TENT4A (ENSG00000112941) Gorilla MODERN SPECIES 8 BASP1 (ENSGGOG00000040563) MYO10 (ENSGGOG00000007641) #11 RETREG1 (ENSGGOG00000010613) #12 ZNF622 (ENSGGOG00000009831) #13 ENSGGOG00000015876 #14 FBXL7 (ENSGGOG00000011159) #15 ENSGGOG00000041512 ANKH (ENSGGOG00000015324) #17 ENSGGOG00000039201 ENSGGOG00000036947 OTULIN (ENSGGOG00000039258) #18 ENSGGOG00000041699 OTULINL (ENSGGOG00000014004) #19 TRIO (ENSGGOG00000013607) #21 ENSGGOG00000043604 DNAH5 (ENSGGOG00000007206) #22 CTNND2 (ENSGGOG00000014843) #24 ENSGGOG00000042335 ENSGGOG00000012480 ANKRD33B (ENSGGOG00000002528) #26 ENSGGOG00000038735 ##20 ROPN1L (ENSGGOG00000004935) #27 MARCHF6 (ENSGGOG00000004929) #28 CMBL (ENSGGOG00000014129) #29 CCT5 (ENSGGOG00000024064) #30 ATPSCKMT (ENSGGOG00000014109) #31 TAS2R1 (ENSGGOG00000013791) #32 SEMA5A (ENSGGOG00000011428) #33 MTRR (ENSGGOG00000000958) FASTKD3 (ENSGGOG00000015994) CFAP90 (ENSGGOG00000011202) Orangutan MODERN SPECIES 18 ENSPPYG00000031629 ENSPPYG00000037527 ENSPPYG00000038058 H3Y2 (ENSPPYG00000039218) BASP1 (ENSPPYG00000015357) MYO10 (ENSPPYG00000015356) #11 RETREG1 (ENSPPYG00000041318) #12 ZNF622 (ENSPPYG00000029803) #13 MARCHF11 (ENSPPYG00000015355) #14 ENSPPYG00000041039 FBXL7 (ENSPPYG00000015354) #15 ANKH (ENSPPYG00000015353) #17 OTULIN (ENSPPYG00000031564) #18 OTULINL (ENSPPYG00000015351) #19 TRIO (ENSPPYG00000015350) #21 DNAH5 (ENSPPYG00000015349) #22 ENSPPYG00000039629 ENSPPYG00000041438 CTNND2 (ENSPPYG00000015348) #24 ENSPPYG00000039207 ANKRD33B (ENSPPYG00000015346) #26 ENSPPYG00000037234 ##20 ENSPPYG00000015345 #27 MARCHF6 (ENSPPYG00000015344) #28 CMBL (ENSPPYG00000015343) #29 CCT5 (ENSPPYG00000015342) #30 ATPSCKMT (ENSPPYG00000015341) #31 TAS2R1 (ENSPPYG00000015340) #32 SEMA5A (ENSPPYG00000015339) #33 MTRR (ENSPPYG00000015338) FASTKD3 (ENSPPYG00000015337) Gibbon MODERN SPECIES 21 ENSNLEG00000011893 ZNF622 (ENSNLEG00000011876) #13 MARCHF11 (ENSNLEG00000032192) #14 FBXL7 (ENSNLEG00000011867) #15 ENSNLEG00000035266 ENSNLEG00000031835 ENSNLEG00000030862 ENSNLEG00000035747 ANKH (ENSNLEG00000011853) #17 OTULIN (ENSNLEG00000011846) #18 ENSNLEG00000036186 ENSNLEG00000018902 OTULINL (ENSNLEG00000011842) #19 ENSNLEG00000033622 TRIO (ENSNLEG00000011777) #21 DNAH5 (ENSNLEG00000030158) #22 CTNND2 (ENSNLEG00000011705) #24 DAP (ENSNLEG00000011695) #25 ANKRD33B (ENSNLEG00000011694) #26 ENSNLEG00000032298 ##20 ROPN1L (ENSNLEG00000011687) #27 MARCHF6 (ENSNLEG00000011608) #28 CMBL (ENSNLEG00000011601) #29 CCT5 (ENSNLEG00000032559) #30 ATPSCKMT (ENSNLEG00000027427) #31 SEMA5A (ENSNLEG00000011566) #33 MTRR (ENSNLEG00000011522) FASTKD3 (ENSNLEG00000011510) CFAP90 (ENSNLEG00000011506) ADCY2 (ENSNLEG00000011468) TENT4A (ENSNLEG00000011434) Cercopithecidae ANCESTRAL SPECIES 5 ENSGT01100000263504.b ENSGT00390000013228.e.b ENSGT00730000111450 ENSGT00940000155469 #11 ENSGT00940000160746 #12 ENSGT00390000018047 #13 ENSGT00940000160025 #14 ENSGT00940000158009 #15 ENSGT00390000012189 #17 ENSGT00860000135740 ENSGT00390000009802.b #18 ENSGT00940000154631.mb ENSGT00390000009802.a #19 ENSGT00940000154766.a.a #21 ENSGT00910000148358 ENSGT00940000155533.d #22 ENSGT00940000154952.a.b #24 ENSGT00940000164737 ENSGT00940000154574.c #25 ENSGT00500000044852.a #26 ENSGT00390000012138.a.a.j.b ##20 ENSGT00390000012731.a.a #27 ENSGT00940000155171.a.b #28 ENSGT00390000000183 #29 ENSGT00550000074988.u.b #30 ENSGT00390000014771.a #31 ENSGT01100000263477.E #32 ENSGT00940000158036 #33 ENSGT00940000155822 ENSGT01030000234607.A.a.a.a ENSGT00390000015121 Cercopithecinae ANCESTRAL SPECIES 9 ENSGT01100000263504.b.r.a ENSGT00390000013228.e.b ENSGT00730000111450 ENSGT00940000155469 #11 ENSGT00940000160746 #12 ENSGT00390000018047 #13 ENSGT00940000160025 #14 ENSGT00940000158009 #15 ENSGT00390000012189 #17 ENSGT00860000135740 ENSGT00390000009802.b #18 ENSGT00940000154631.mb ENSGT00390000009802.a #19 ENSGT00940000154766.a.a #21 ENSGT00910000148358 ENSGT00940000155533.d #22 ENSGT00940000154952.a.b #24 ENSGT00940000164737 ENSGT00940000154574.c #25 ENSGT00500000044852.a #26 ENSGT00390000012731.a.a #27 ENSGT00940000155171.a.b #28 ENSGT00390000000183 #29 ENSGT00550000074988.u.b #30 ENSGT00390000014771.a #31 ENSGT01100000263477.E #32 ENSGT00940000158036 #33 ENSGT00940000155822 ENSGT01030000234607.A.a.a.a ENSGT00390000015121 ENSGT00910000148650 Cercopithecinae_a ANCESTRAL SPECIES 9 ENSGT01100000263504.b.r.b ENSGT00910000147515 ENSGT00730000111450 ENSGT00940000155469 #11 ENSGT00940000160746 #12 ENSGT00390000018047 #13 ENSGT00940000160025 #14 ENSGT00940000158009 #15 ENSGT00390000012189 #17 ENSGT00860000135740 ENSGT00390000009802.b #18 ENSGT00940000154631.mb ENSGT00390000009802.a #19 ENSGT00940000154766.a.a #21 ENSGT00910000148358 ENSGT00940000155533.d #22 ENSGT00940000154952.a.b #24 ENSGT00940000164737 ENSGT00940000154574.c #25 ENSGT00500000044852.a #26 ENSGT00390000012731.a.a #27 ENSGT00940000155171.a.b #28 ENSGT00390000000183 #29 ENSGT00550000074988.u.b #30 ENSGT00390000014771.a #31 ENSGT01100000263477.E #32 ENSGT00940000158036 #33 ENSGT00940000155822 ENSGT01030000234607.A.a.a.a ENSGT00390000015121 ENSGT00910000148650 Macaca ANCESTRAL SPECIES 7 ENSGT00910000147515 ENSGT00730000111450 ENSGT00940000155469 #11 ENSGT00940000160746 #12 ENSGT00390000018047 #13 ENSGT00940000160025 #14 ENSGT00940000158009 #15 ENSGT00390000000950.c.a ENSGT00390000012189 #17 ENSGT00860000135740 ENSGT00390000009802.b #18 ENSGT00940000154631.mb ENSGT00390000009802.a #19 ENSGT00940000154766.a.a #21 ENSGT00910000148358 ENSGT00940000155533.d #22 ENSGT00940000154952.a.b #24 ENSGT00940000164737 ENSGT00940000154574.c #25 ENSGT00500000044852.a #26 ENSGT00390000012731.a.a #27 ENSGT00940000155171.a.b #28 ENSGT00390000000183 #29 ENSGT00550000074988.u.b #30 ENSGT00390000014771.a #31 ENSGT01100000263477.E #32 ENSGT00940000158036 #33 ENSGT00940000155822 ENSGT01030000234607.A.a.a.a ENSGT00390000015121 ENSGT00910000148650 Pig-tailed macaque MODERN SPECIES 189 ENSMNEG00000013688 BASP1 (ENSMNEG00000023203) MYO10 (ENSMNEG00000043997) #11 RETREG1 (ENSMNEG00000041528) #12 ZNF622 (ENSMNEG00000036952) #13 MARCHF11 (ENSMNEG00000014598) #14 FBXL7 (ENSMNEG00000015203) #15 ENSMNEG00000032726 ANKH (ENSMNEG00000033750) #17 ENSMNEG00000039192 OTULIN (ENSMNEG00000028710) #18 ENSMNEG00000033826 OTULINL (ENSMNEG00000035378) #19 TRIO (ENSMNEG00000035913) #21 ENSMNEG00000041446 DNAH5 (ENSMNEG00000033291) #22 Macaca_a ANCESTRAL SPECIES 8 ENSGT00390000013228.e.b.h ENSGT00390000013228.e.b.g.a.b.a ENSGT00730000111450 ENSGT01090000260213.a.a.a.a.a.a ENSGT00940000155469 #11 ENSGT00940000160746 #12 ENSGT00390000018047 #13 ENSGT00940000160025 #14 ENSGT00940000158009 #15 ENSGT00390000012189 #17 ENSGT00390000009802.b #18 ENSGT00390000009802.a #19 ENSGT00940000166969.b ENSGT00940000154766.a.a #21 ENSGT01080000257579.b.a.a ENSGT00940000155533.d #22 ENSGT00940000154952.a.b #24 ENSGT00940000164737 ENSGT00500000044852.a #26 ENSGT00390000012731.a.a #27 ENSGT00940000155171.a.b #28 ENSGT00390000000183 #29 ENSGT00550000074988.u.b #30 ENSGT00390000014771.a #31 ENSGT01100000263477.E #32 ENSGT00940000158036 #33 ENSGT00940000155822 ENSGT01030000234607.A.a.a.a ENSGT00390000015121 ENSGT00910000148650 ENSGT00940000156424 Crab-eating macaque MODERN SPECIES 16 ENSMFAG00000058675 ENSMFAG00000044958 #11 RETREG1 (ENSMFAG00000015961) #12 ZNF622 (ENSMFAG00000058196) #13 FBXL7 (ENSMFAG00000000432) #15 ENSMFAG00000060701 ENSMFAG00000063263 ANKH (ENSMFAG00000038859) #17 OTULIN (ENSMFAG00000037873) #18 OTULINL (ENSMFAG00000037715) #19 ENSMFAG00000064998 ENSMFAG00000054607 ENSMFAG00000062808 #21 ENSMFAG00000035974 #21 ENSMFAG00000057716 DNAH5 (ENSMFAG00000001076) #22 CTNND2 (ENSMFAG00000044186) #24 ENSMFAG00000036456 ENSMFAG00000063851 ENSMFAG00000048413 ENSMFAG00000056679 ROPN1L (ENSMFAG00000000471) #27 MARCHF6 (ENSMFAG00000002411) #28 CMBL (ENSMFAG00000001594) #29 CCT5 (ENSMFAG00000045954) #30 ATPSCKMT (ENSMFAG00000044629) #31 ENSMFAG00000053806 TAS2R1 (ENSMFAG00000041270) #32 SEMA5A (ENSMFAG00000038895) #33 MTRR (ENSMFAG00000036712) FASTKD3 (ENSMFAG00000040312) Rhesus MODERN SPECIES 16 MYO10 (ENSMMUG00000012672) #11 RETREG1 (ENSMMUG00000001375) #12 ZNF622 (ENSMMUG00000055492) #13 MARCHF11 (ENSMMUG00000007069) #14 FBXL7 (ENSMMUG00000013364) #15 ENSMMUG00000059412 ANKH (ENSMMUG00000021942) #17 ENSMMUG00000060654 OTULIN (ENSMMUG00000059554) #18 OTULINL (ENSMMUG00000005665) #19 ENSMMUG00000065193 ENSMMUG00000064349 ENSMMUG00000050304 TRIO (ENSMMUG00000015489) #21 ENSMMUG00000061003 DNAH5 (ENSMMUG00000011026) #22 CTNND2 (ENSMMUG00000023419) #24 DAP (ENSMMUG00000001131) ANKRD33B (ENSMMUG00000001130) #26 ROPN1L (ENSMMUG00000060969) #27 MARCHF6 (ENSMMUG00000009758) #28 CMBL (ENSMMUG00000020113) #29 CCT5 (ENSMMUG00000020112) #30 ATPSCKMT (ENSMMUG00000020111) #31 ENSMMUG00000059787 ENSMMUG00000064218 TAS2R1 (ENSMMUG00000058066) #32 SEMA5A (ENSMMUG00000020160) #33 MTRR (ENSMMUG00000018747) FASTKD3 (ENSMMUG00000018746) CFAP90 (ENSMMUG00000018745) Cercopithecinae_b ANCESTRAL SPECIES 4 ENSGT00940000154187.a.b #9 ENSGT00940000157512 #10 ENSGT00390000013228.e.b ENSGT00730000111450 ENSGT00940000155469 #11 ENSGT00940000160746 #12 ENSGT00390000018047 #13 ENSGT00940000160025 #14 ENSGT00940000158009 #15 ENSGT00390000012189 #17 ENSGT00860000135740 ENSGT00390000009802.b #18 ENSGT00940000154631.mb ENSGT00390000009802.a #19 ENSGT00940000154766.a.a #21 ENSGT00940000155533.d #22 ENSGT00940000154952.a.b #24 ENSGT00940000164737 ENSGT00500000044852.a #26 ENSGT00390000012731.a.a #27 ENSGT00940000155171.a.b #28 ENSGT00390000000183 #29 ENSGT00550000074988.u.b #30 ENSGT00390000014771.a #31 ENSGT01100000263477.E #32 ENSGT00940000158036 #33 ENSGT00940000155822 ENSGT01030000234607.A.a.a.a ENSGT00390000015121 ENSGT00940000156424 ENSGT00940000157811 Cercopithecinae_d ANCESTRAL SPECIES 117 ENSGT00390000013228.e.b ENSGT00730000111450 ENSGT00940000155469 #11 ENSGT00940000160746 #12 ENSGT00390000018047 #13 ENSGT00940000160025 #14 ENSGT00940000158009 #15 ENSGT00940000166073 ENSGT00390000012189 #17 ENSGT00860000135740 ENSGT00390000009802.b #18 ENSGT00940000154631.mb ENSGT00390000009802.a #19 ENSGT00940000154766.a.a #21 ENSGT00940000155533.d #22 ENSGT00940000154952.a.b #24 ENSGT00940000164737 ENSGT00500000044852.a #26 ENSGT00390000012731.a.a #27 ENSGT00940000155171.a.b #28 ENSGT00390000000183 #29 ENSGT00550000074988.u.b #30 ENSGT00390000014771.a #31 ENSGT00940000158036 #33 ENSGT00940000155822 ENSGT01030000234607.A.a.a.a ENSGT00390000015121 ENSGT00940000156424 ENSGT00910000147919 ENSGT00940000157811 Drill MODERN SPECIES 1129 FBXL7 (ENSMLEG00000036522) #15 ENSMLEG00000043587 ANKH (ENSMLEG00000038701) #17 ENSMLEG00000035542 OTULIN (ENSMLEG00000030194) #18 OTULINL (ENSMLEG00000028772) #19 TRIO (ENSMLEG00000040461) #21 DNAH5 (ENSMLEG00000028943) #22 Sooty mangabey MODERN SPECIES 651 LINC02218 (ENSCATG00000032022) BASP1 (ENSCATG00000017063) MYO10 (ENSCATG00000017095) #11 RETREG1 (ENSCATG00000009952) #12 ZNF622 (ENSCATG00000031254) #13 MARCHF11 (ENSCATG00000040604) #14 FBXL7 (ENSCATG00000044863) #15 ENSCATG00000040500 ANKH (ENSCATG00000037767) #17 ENSCATG00000039416 OTULIN (ENSCATG00000036861) #18 ENSCATG00000038885 OTULINL (ENSCATG00000010694) #19 TRIO (ENSCATG00000041897) #21 DNAH5 (ENSCATG00000036141) #22 CTNND2 (ENSCATG00000032880) #24 ENSCATG00000012211 ANKRD33B (ENSCATG00000039092) #26 ROPN1L (ENSCATG00000020298) #27 MARCHF6 (ENSCATG00000013412) #28 CMBL (ENSCATG00000033887) #29 CCT5 (ENSCATG00000030742) #30 ATPSCKMT (ENSCATG00000040712) #31 ENSCATG00000029390 SEMA5A (ENSCATG00000042404) #33 MTRR (ENSCATG00000045027) FASTKD3 (ENSCATG00000028957) CFAP90 (ENSCATG00000036277) ADCY2 (ENSCATG00000033939) ENSCATG00000042677 Olive baboon MODERN SPECIES 15 ENSPANG00000032323 ENSPANG00000039022 ENSPANG00000039610 MYO10 (ENSPANG00000002428) #11 RETREG1 (ENSPANG00000019521) #12 ZNF622 (ENSPANG00000009355) #13 ENSPANG00000046759 MARCHF11 (ENSPANG00000017253) #14 ENSPANG00000046248 FBXL7 (ENSPANG00000012119) #15 ANKH (ENSPANG00000014384) #17 OTULIN (ENSPANG00000016505) #18 OTULINL (ENSPANG00000014910) #19 TRIO (ENSPANG00000016240) #21 ENSPANG00000047693 DNAH5 (ENSPANG00000044963) #22 ENSPANG00000040641 ENSPANG00000007304 ENSPANG00000019790 CTNND2 (ENSPANG00000023864) #24 ENSPANG00000042254 ENSPANG00000009356 ANKRD33B (ENSPANG00000021670) #26 ROPN1L (ENSPANG00000008958) #27 MARCHF6 (ENSPANG00000001813) #28 CMBL (ENSPANG00000004379) #29 CCT5 (ENSPANG00000006999) #30 ATPSCKMT (ENSPANG00000015778) #31 TAS2R1 (ENSPANG00000047467) #32 SEMA5A (ENSPANG00000012025) #33 ENSPANG00000039496 Vervet Monkey MODERN SPECIES 23 CDH18 (ENSCSAG00000017245) #10 ENSCSAG00000017248 ENSCSAG00000018991 ENSCSAG00000018990 ENSCSAG00000018989 BASP1 (ENSCSAG00000018988) MYO10 (ENSCSAG00000017255) #11 RETREG1 (ENSCSAG00000017260) #12 ZNF622 (ENSCSAG00000017262) #13 MARCHF11 (ENSCSAG00000017263) #14 FBXL7 (ENSCSAG00000017265) #15 ANKH (ENSCSAG00000017267) #17 OTULIN (ENSCSAG00000017269) #18 OTULINL (ENSCSAG00000017275) #19 TRIO (ENSCSAG00000017284) #21 DNAH5 (ENSCSAG00000017291) #22 CTNND2 (ENSCSAG00000017304) #24 ENSCSAG00000017308 ANKRD33B (ENSCSAG00000017312) #26 ENSCSAG00000017314 ROPN1L (ENSCSAG00000017316) #27 MARCHF6 (ENSCSAG00000017319) #28 CMBL (ENSCSAG00000017321) #29 CCT5 (ENSCSAG00000017323) #30 ATPSCKMT (ENSCSAG00000017326) #31 TAS2R1 (ENSCSAG00000018987) #32 SEMA5A (ENSCSAG00000017328) #33 MTRR (ENSCSAG00000017329) FASTKD3 (ENSCSAG00000017331) CFAP90 (ENSCSAG00000017332) ADCY2 (ENSCSAG00000017334) Rhinopithecus ANCESTRAL SPECIES 335 ENSGT00910000147515 ENSGT00730000111450 ENSGT00940000155469 #11 ENSGT00940000160746 #12 ENSGT00390000018047 #13 ENSGT00940000160025 #14 ENSGT00940000158009 #15 ENSGT00910000147847 ENSGT00860000135740 ENSGT00390000012189 #17 ENSGT00390000009802.b #18 ENSGT00940000154631.mb ENSGT00390000009802.a #19 ENSGT00940000154766.a.a #21 ENSGT00940000155533.d #22 ENSGT00390000007084.c.a.d.c.a.b Golden snub-nosed monkey MODERN SPECIES 1773 MARCHF11 (ENSRROG00000034909) #14 FBXL7 (ENSRROG00000017801) #15 ENSRROG00000039150 ENSRROG00000029425 ANKH (ENSRROG00000040288) #17 OTULIN (ENSRROG00000028826) #18 ENSRROG00000022524 OTULINL (ENSRROG00000029065) #19 TRIO (ENSRROG00000036518) #21 DNAH5 (ENSRROG00000034442) #22 ENSRROG00000037267 Black snub-nosed monkey MODERN SPECIES 1127 ENSRBIG00000043466 ANKH (ENSRBIG00000032846) #17 OTULIN (ENSRBIG00000015071) #18 ENSRBIG00000034460 OTULINL (ENSRBIG00000039322) #19 TRIO (ENSRBIG00000038517) #21 DNAH5 (ENSRBIG00000041383) #22 ENSRBIG00000031518 Platyrrhini ANCESTRAL SPECIES 7 ENSGT00940000154673.a ENSGT00940000160496.b ENSGT00940000154187.a.a #7 ENSGT00940000154187.a.b #9 ENSGT00940000157512 #10 ENSGT00940000155469 #11 ENSGT00940000160746 #12 ENSGT00390000018047.a #13 ENSGT00940000160025 #14 ENSGT00940000158009 #15 ENSGT00390000012189 #17 ENSGT00390000009802.b #18 ENSGT00390000009802.a #19 ENSGT00940000154766.a.a #21 ENSGT00910000148358 ENSGT00940000155533.d #22 ENSGT00940000154952.a.b #24 ENSGT00940000164737 ENSGT00500000044852.a #26 ENSGT00390000012731.a.a #27 ENSGT00940000155171.a.b #28 ENSGT00390000000183.l #29 ENSGT00550000074988 #30 ENSGT00390000014771.a #31 ENSGT01100000263477.E #32 ENSGT00940000158036 #33 ENSGT00940000155822 ENSGT01030000234607.A.a.a.a ENSGT00390000015121 ENSGT00940000156424 ENSGT00940000157811 Cebidae ANCESTRAL SPECIES 6 ENSGT00940000154673.a ENSGT00940000160496.b ENSGT00940000154187.a.a #7 ENSGT00940000154187.a.b #9 ENSGT00940000157512 #10 ENSGT00940000155469 #11 ENSGT00940000160746 #12 ENSGT00390000018047.a #13 ENSGT00940000160025 #14 ENSGT00940000158009 #15 ENSGT00390000012189 #17 ENSGT00390000009802.b #18 ENSGT00390000009802.a #19 ENSGT00940000154766.a.a #21 ENSGT00910000148358 ENSGT00940000155533.d #22 ENSGT00940000154952.a.b #24 ENSGT00940000164737 ENSGT00500000044852.a #26 ENSGT00390000012731.a.a #27 ENSGT00940000155171.a.b #28 ENSGT00390000000183.l #29 ENSGT00550000074988 #30 ENSGT00390000014771.a #31 ENSGT01100000263477.E #32 ENSGT00940000158036 #33 ENSGT00940000155822 ENSGT01030000234607.A.a.a.a ENSGT00390000015121 ENSGT00940000156424 ENSGT00940000157811 Cebidae_a DUPLICATION Cebidae_a ANCESTRAL SPECIES 82 ENSGT00940000154187.a.b #9 ENSGT00940000157512 #10 ENSGT00940000155469 #11 ENSGT00940000160746 #12 ENSGT00390000018047.a #13 ENSGT00940000160025 #14 ENSGT00940000158009 #15 ENSGT00390000012189 #17 ENSGT00390000009802.b #18 ENSGT00390000009802.a #19 ENSGT00940000154766.a.a #21 ENSGT00940000155533.d.j #22 ENSGT00910000148358 ENSGT00940000155533.d.i #22 ENSGT00940000154952.a.b #24 ENSGT00940000164737 ENSGT00500000044852.a #26 ENSGT00390000012731.a.a #27 ENSGT00940000155171.a.b #28 ENSGT00390000000183.l #29 ENSGT00550000074988 #30 ENSGT00390000014771.a #31 ENSGT00940000158036 #33 ENSGT00940000155822 ENSGT01030000234607.A.a.a.a ENSGT00390000015121 ENSGT00940000156424 ENSGT00940000157811 ENSGT00950000182886.b.b Bolivian squirrel monkey MODERN SPECIES 92 MARCHF11 (ENSSBOG00000035655) #14 FBXL7 (ENSSBOG00000031131) #15 ANKH (ENSSBOG00000024577) #17 OTULIN (ENSSBOG00000026879) #18 OTULINL (ENSSBOG00000027772) #19 TRIO (ENSSBOG00000029501) #21 ENSSBOG00000011358 DNAH5 (ENSSBOG00000021905) #22 CTNND2 (ENSSBOG00000024406) #24 ENSSBOG00000025627 ENSSBOG00000026915 ENSSBOG00000032547 #26 ROPN1L (ENSSBOG00000021335) #27 MARCHF6 (ENSSBOG00000020372) #28 CMBL (ENSSBOG00000021093) #29 CCT5 (ENSSBOG00000022734) #30 ATPSCKMT (ENSSBOG00000021099) #31 SEMA5A (ENSSBOG00000032395) #33 MTRR (ENSSBOG00000028252) FASTKD3 (ENSSBOG00000020653) CFAP90 (ENSSBOG00000024374) ADCY2 (ENSSBOG00000025740) TENT4A (ENSSBOG00000035549) Capuchin MODERN SPECIES 360 ENSCCAG00000022764 #22 Cebidae_a ANCESTRAL SPECIES 82 ENSGT00940000154187.a.b #9 ENSGT00940000157512 #10 ENSGT00940000155469 #11 ENSGT00940000160746 #12 ENSGT00390000018047.a #13 ENSGT00940000160025 #14 ENSGT00940000158009 #15 ENSGT00390000012189 #17 ENSGT00390000009802.b #18 ENSGT00390000009802.a #19 ENSGT00940000154766.a.a #21 ENSGT00940000155533.d.j #22 ENSGT00910000148358 ENSGT00940000155533.d.i #22 ENSGT00940000154952.a.b #24 ENSGT00940000164737 ENSGT00500000044852.a #26 ENSGT00390000012731.a.a #27 ENSGT00940000155171.a.b #28 ENSGT00390000000183.l #29 ENSGT00550000074988 #30 ENSGT00390000014771.a #31 ENSGT00940000158036 #33 ENSGT00940000155822 ENSGT01030000234607.A.a.a.a ENSGT00390000015121 ENSGT00940000156424 Capuchin MODERN SPECIES 35 CDH12 (ENSCCAG00000019124) #9 CDH18 (ENSCCAG00000025772) #10 MYO10 (ENSCCAG00000031156) #11 RETREG1 (ENSCCAG00000037769) #12 ZNF622 (ENSCCAG00000035492) #13 ENSCCAG00000032090 ENSCCAG00000023780 MARCHF11 (ENSCCAG00000024495) #14 FBXL7 (ENSCCAG00000027611) #15 ANKH (ENSCCAG00000011430) #17 OTULIN (ENSCCAG00000025591) #18 OTULINL (ENSCCAG00000037191) #19 TRIO (ENSCCAG00000027836) #21 ENSCCAG00000030740 #22 Marmoset MODERN SPECIES 11 ENSCJAG00000031497 ENSCJAG00000081133 ENSCJAG00000085722 ENSCJAG00000082447 BASP1 (ENSCJAG00000046235) ENSCJAG00000053651 MYO10 (ENSCJAG00000011831) #11 RETREG1 (ENSCJAG00000042515) #12 MARCHF11 (ENSCJAG00000047285) #14 FBXL7 (ENSCJAG00000010823) #15 ANKH (ENSCJAG00000010839) #17 OTULIN (ENSCJAG00000010884) #18 OTULINL (ENSCJAG00000010893) #19 TRIO (ENSCJAG00000010904) #21 ENSCJAG00000072293 DNAH5 (ENSCJAG00000009326) #22 ENSCJAG00000076372 ENSCJAG00000071150 ENSCJAG00000074642 ENSCJAG00000080282 ENSCJAG00000004019 CTNND2 (ENSCJAG00000009238) #24 ENSCJAG00000085149 ENSCJAG00000046611 ANKRD33B (ENSCJAG00000009224) #26 ENSCJAG00000083278 MARCHF6 (ENSCJAG00000009091) #28 ENSCJAG00000045979 #29 ENSCJAG00000008977 #30 ATPSCKMT (ENSCJAG00000070705) #31 TAS2R1 (ENSCJAG00000077757) #32 Mas night monkey MODERN SPECIES 837 CDH12 (ENSANAG00000034476) #9 CDH18 (ENSANAG00000030633) #10 ENSANAG00000019238 MYO10 (ENSANAG00000036842) #11 RETREG1 (ENSANAG00000036598) #12 ENSANAG00000031551 #13 MARCHF11 (ENSANAG00000029893) #14 ENSANAG00000030785 FBXL7 (ENSANAG00000028663) #15 ANKH (ENSANAG00000019438) #17 OTULIN (ENSANAG00000003357) #18 OTULINL (ENSANAG00000035304) #19 ENSANAG00000025539 ##16 TRIO (ENSANAG00000026493) #21 ENSANAG00000019517 DNAH5 (ENSANAG00000030588) #22 CTNND2 (ENSANAG00000036393) #24 ENSANAG00000033682 ANKRD33B (ENSANAG00000027592) #26 ROPN1L (ENSANAG00000021831) #27 MARCHF6 (ENSANAG00000037794) #28 CMBL (ENSANAG00000029875) #29 CCT5 (ENSANAG00000026097) #30 ATPSCKMT (ENSANAG00000022943) #31 SEMA5A (ENSANAG00000021223) #33 MTRR (ENSANAG00000023571) FASTKD3 (ENSANAG00000021217) CFAP90 (ENSANAG00000032842) ADCY2 (ENSANAG00000023768) TENT4A (ENSANAG00000037806) SRD5A1 (ENSANAG00000020870) Tarsier MODERN SPECIES 4584 DNAH5 (ENSTSYG00000009866) #22 Strepsirrhini ANCESTRAL SPECIES 5 ENSGT00940000160496.b ENSGT00940000154187.a.a #7 ENSGT00940000154187.a.b #9 ENSGT00940000157512 #10 ENSGT00730000111450 ENSGT00940000155469 #11 ENSGT00940000160746 #12 ENSGT00390000018047 #13 ENSGT00940000160025 #14 ENSGT00940000158009 #15 ENSGT00390000000950.c.a.n ENSGT00390000012189 #17 ENSGT00390000009802.b #18 ENSGT00390000009802.a #19 ENSGT00940000154766.a.a #21 ENSGT00940000155533.d #22 ENSGT00940000154952.a.b #24 ENSGT00940000154574.c #25 ENSGT00500000044852.a #26 ENSGT00390000012731.a.a #27 ENSGT00940000155171.a.b #28 ENSGT00390000000183 #29 ENSGT00550000074988 #30 ENSGT00390000014771.a #31 ENSGT01100000263477.E #32 ENSGT00940000158036 #33 ENSGT00940000155822 ENSGT01030000234607.A.a.a.a ENSGT00390000015121 ENSGT00940000156424 ENSGT00940000157811 Lemuriformes ANCESTRAL SPECIES 47 ENSGT00940000160496.b ENSGT00940000154187.a.a #7 ENSGT00940000154187.a.b #9 ENSGT00940000157512 #10 ENSGT00730000111450 ENSGT00940000155469 #11 ENSGT00940000160746 #12 ENSGT00390000018047 #13 ENSGT00940000160025 #14 ENSGT00940000158009 #15 ENSGT00390000000950.c.a.n ENSGT00390000012189 #17 ENSGT00390000009802.b #18 ENSGT00390000009802.a #19 ENSGT00940000154766.a.a #21 ENSGT00940000155533.d #22 ENSGT00940000154952.a.b #24 ENSGT00940000154574.c #25 ENSGT00500000044852.a #26 ENSGT00390000012731.a.a #27 ENSGT00940000155171.a.b #28 ENSGT00390000000183 #29 ENSGT00550000074988 #30 ENSGT00390000014771.a #31 ENSGT01100000263477.E #32 ENSGT00940000158036 #33 ENSGT00940000155822 ENSGT01030000234607.A.a.a.a ENSGT00390000015121 ENSGT00940000156424 ENSGT00940000157811 Mouse lemur MODERN SPECIES 3 ZNF366 (ENSMICG00000026789) TNPO1 (ENSMICG00000008468) ENSMICG00000028486 ENSMICG00000035529 ENSMICG00000046999 MYO10 (ENSMICG00000010556) #11 RETREG1 (ENSMICG00000010548) #12 ZNF622 (ENSMICG00000010544) #13 ENSMICG00000047304 #14 FBXL7 (ENSMICG00000010535) #15 ENSMICG00000004970 ANKH (ENSMICG00000017365) #17 OTULIN (ENSMICG00000017364) #18 ENSMICG00000017363 #19 TRIO (ENSMICG00000015477) #21 DNAH5 (ENSMICG00000015344) #22 CTNND2 (ENSMICG00000013931) #24 DAP (ENSMICG00000044020) #25 ANKRD33B (ENSMICG00000017147) #26 ROPN1L (ENSMICG00000035924) #27 MARCHF6 (ENSMICG00000010632) #28 CMBL (ENSMICG00000000533) #29 CCT5 (ENSMICG00000000530) #30 ATPSCKMT (ENSMICG00000043453) #31 ENSMICG00000010134 SEMA5A (ENSMICG00000002641) #33 MTRR (ENSMICG00000002955) FASTKD3 (ENSMICG00000002954) CFAP90 (ENSMICG00000034745) ADCY2 (ENSMICG00000002952) TENT4A (ENSMICG00000016562) Lemuriformes_a ANCESTRAL SPECIES 215 ENSGT00940000154187.a.b #9 ENSGT00940000157512 #10 ENSGT00730000111450 ENSGT00940000155469 #11 ENSGT00940000160746 #12 ENSGT00390000018047 #13 ENSGT00940000160025 #14 ENSGT00940000158009 #15 ENSGT00390000000950.c.a.n ENSGT00390000012189 #17 ENSGT00390000009802.b #18 ENSGT00390000009802.a #19 ENSGT00940000154766.a.a #21 ENSGT00940000155533.d #22 Greater bamboo lemur MODERN SPECIES 1543 DNAH5 (ENSPSMG00000011118) #22 ENSPSMG00000011130 Coquerels sifaka MODERN SPECIES 52 ENSPCOG00000016592 MYO10 (ENSPCOG00000014161) #11 RETREG1 (ENSPCOG00000022290) #12 ZNF622 (ENSPCOG00000020267) #13 MARCHF11 (ENSPCOG00000018629) #14 FBXL7 (ENSPCOG00000016187) #15 ENSPCOG00000021858 ANKH (ENSPCOG00000012875) #17 OTULIN (ENSPCOG00000020862) #18 OTULINL (ENSPCOG00000023521) #19 TRIO (ENSPCOG00000022681) #21 DNAH5 (ENSPCOG00000027561) #22 Bushbaby MODERN SPECIES 148 ENSOGAG00000030812 ENSOGAG00000012971 ENSOGAG00000003705 CDH12 (ENSOGAG00000012968) #9 CDH18 (ENSOGAG00000004532) #10 MYO10 (ENSOGAG00000014841) #11 RETREG1 (ENSOGAG00000014839) #12 ZNF622 (ENSOGAG00000014834) #13 MARCHF11 (ENSOGAG00000011673) #14 FBXL7 (ENSOGAG00000003172) #15 ENSOGAG00000024319 ANKH (ENSOGAG00000006664) #17 OTULIN (ENSOGAG00000008440) #18 OTULINL (ENSOGAG00000014270) #19 TRIO (ENSOGAG00000014252) #21 DNAH5 (ENSOGAG00000009433) #22 CTNND2 (ENSOGAG00000005411) #24 ENSOGAG00000034923 ANKRD33B (ENSOGAG00000009776) #26 ROPN1L (ENSOGAG00000002306) #27 MARCHF6 (ENSOGAG00000002304) #28 CMBL (ENSOGAG00000016909) #29 CCT5 (ENSOGAG00000029948) #30 ATPSCKMT (ENSOGAG00000003583) #31 ENSOGAG00000024134 ENSOGAG00000031227 TAS2R1 (ENSOGAG00000016076) #32 SEMA5A (ENSOGAG00000016380) #33 MTRR (ENSOGAG00000001029) FASTKD3 (ENSOGAG00000001028) CFAP90 (ENSOGAG00000028915) Laurasiatheria ANCESTRAL SPECIES 8 ENSGT00940000154187.a.a #7 ENSGT00940000154187.a.b #9 ENSGT00940000157512 #10 ENSGT00730000111450 ENSGT00940000155469 #11 ENSGT00940000160746 #12 ENSGT00390000018047 #13 ENSGT00940000160025 #14 ENSGT00940000158009 #15 ENSGT00390000012189 #17 ENSGT01090000260321 ENSGT00390000009802.b #18 ENSGT00390000009802.a #19 ENSGT00940000166969.b ENSGT00940000154766.a.a #21 ENSGT00940000155533.d #22 ENSGT00940000154952.a.b #24 ENSGT00940000154574.c #25 ENSGT00500000044852.a #26 ENSGT00390000012731.a.a #27 ENSGT00940000155171.a.b #28 ENSGT00940000155171.a.a ##28 ENSGT00390000000183 #29 ENSGT00550000074988 #30 ENSGT00390000014771.a #31 ENSGT01100000263477.E #32 ENSGT00940000158036 #33 ENSGT00940000155822 ENSGT01030000234607.A.a.a.a ENSGT00390000015121 ENSGT00910000148650 Laurasiatheria_a ANCESTRAL SPECIES 9 ENSGT00940000154187.a.b #9 ENSGT00940000157512 #10 ENSGT00940000159547.d ENSGT00730000111450 ENSGT00940000155469 #11 ENSGT00940000160746 #12 ENSGT00390000018047 #13 ENSGT00940000160025 #14 ENSGT00940000158009 #15 ENSGT00390000012189 #17 ENSGT01090000260321 ENSGT00390000009802.b #18 ENSGT00390000009802.a #19 ENSGT00940000166969.b ENSGT00940000154766.a.a #21 ENSGT00940000155533.d #22 ENSGT00940000154952.a.b #24 ENSGT00940000154574.c #25 ENSGT00500000044852.a #26 ENSGT00390000012731.a.a #27 ENSGT00940000155171.a.b #28 ENSGT00940000155171.a.a ##28 ENSGT00390000000183 #29 ENSGT00550000074988 #30 ENSGT00390000014771.a #31 ENSGT01100000263477.E #32 ENSGT00940000158036 #33 ENSGT00940000155822 ENSGT01030000234607.A.a.a.a ENSGT00390000015121 ENSGT00910000148650 Artiodactyla ANCESTRAL SPECIES 8 ENSGT00940000154187.a.a #7 ENSGT00940000154187.a.b #9 ENSGT00940000157512 #10 ENSGT00940000159547.d ENSGT00730000111450.g.b ENSGT00940000155469 #11 ENSGT00940000160746 #12 ENSGT00390000018047 #13 ENSGT00940000160025 #14 ENSGT00940000158009 #15 ENSGT00390000012189 #17 ENSGT01090000260321 ENSGT00390000009802.b #18 ENSGT00390000009802.a #19 ENSGT00940000154766.a.a #21 ENSGT00940000155533.d #22 ENSGT00940000154952.a.b #24 ENSGT00940000154574.c #25 ENSGT00500000044852.a #26 ENSGT00390000012731.a.a #27 ENSGT00940000155171.a.b #28 ENSGT00390000000183 #29 ENSGT00550000074988 #30 ENSGT00390000014771.a #31 ENSGT01100000263477.E #32 ENSGT00940000158036 #33 ENSGT00940000155822 ENSGT01030000234607.A.a.a.a ENSGT00390000015121 ENSGT00910000148650 ENSGT00940000156424 Suina ANCESTRAL SPECIES 25 ENSGT00940000154187.a.a #7 ENSGT01070000254103 ENSGT00940000154187.a.b #9 ENSGT00940000157512 #10 ENSGT00940000159547.d ENSGT00730000111450.g.b ENSGT00940000155469 #11 ENSGT00940000160746 #12 ENSGT00390000018047 #13 ENSGT00940000160025 #14 ENSGT00940000158009 #15 ENSGT00390000012189 #17 ENSGT00390000009802.b #18 ENSGT00390000009802.a #19 ENSGT00940000154766.a.a #21 ENSGT00940000155533.d #22 ENSGT00940000154952.a.b #24 ENSGT00940000154574.c #25 ENSGT00500000044852.a #26 ENSGT00390000012731.a.a #27 Pig MODERN SPECIES 7 CDH18 (ENSSSCG00000026842) #10 ENSSSCG00000043590 ENSSSCG00000016796 ENSSSCG00000039222 MYO10 (ENSSSCG00000016794) #11 RETREG1 (ENSSSCG00000016792) #12 ZNF622 (ENSSSCG00000016793) #13 ENSSSCG00000016791 MARCHF11 (ENSSSCG00000031525) #14 ENSSSCG00000016789 FBXL7 (ENSSSCG00000028239) #15 ANKH (ENSSSCG00000016784) #17 OTULIN (ENSSSCG00000034714) #18 OTULINL (ENSSSCG00000016782) #19 TRIO (ENSSSCG00000016781) #21 DNAH5 (ENSSSCG00000032827) #22 CTNND2 (ENSSSCG00000016780) #24 DAP (ENSSSCG00000032942) #25 ANKRD33B (ENSSSCG00000039609) #26 ROPN1L (ENSSSCG00000022306) #27 Chacoan peccary MODERN SPECIES 164 OTULINL (ENSCWAG00000020379) #19 TRIO (ENSCWAG00000020416) #21 DNAH5 (ENSCWAG00000020552) #22 CTNND2 (ENSCWAG00000020670) #24 ENSCWAG00000020833 ANKRD33B (ENSCWAG00000020847) #26 ROPN1L (ENSCWAG00000020860) #27 Artiodactyla_a ANCESTRAL SPECIES 7 ENSGT00940000157512 #10 ENSGT00940000159547.d ENSGT00730000111450.h ENSGT00390000013228.e.b ENSGT00730000111450.g.b ENSGT00940000155469 #11 ENSGT00940000160746 #12 ENSGT00390000018047 #13 ENSGT00940000160025 #14 ENSGT00940000158009 #15 ENSGT00390000012189 #17 ENSGT01090000260321 ENSGT00390000009802.b #18 ENSGT00390000009802.a #19 ENSGT00940000154766.a.a #21 ENSGT00940000155533.d #22 ENSGT00940000154952.a.b #24 ENSGT00940000154574.c #25 ENSGT00500000044852.a #26 ENSGT00390000012731.a.a #27 ENSGT00940000155171.a.b #28 ENSGT00390000000183 #29 ENSGT00550000074988 #30 ENSGT00390000014771.a #31 ENSGT01100000263477.E #32 ENSGT00940000158036 #33 ENSGT00940000155822 ENSGT01030000234607.A.a.a.a ENSGT00390000015121 ENSGT00910000148650 ENSGT00940000156424 Artiodactyla_b ANCESTRAL SPECIES 8 ENSGT00940000157512 #10 ENSGT00940000159547.d ENSGT00390000013228.e.b ENSGT00730000111450.h ENSGT00730000111450.g.b ENSGT00940000155469 #11 ENSGT00940000160746 #12 ENSGT00390000018047 #13 ENSGT00940000160025 #14 ENSGT00940000158009 #15 ENSGT00390000012189 #17 ENSGT01090000260321 ENSGT00390000009802.b #18 ENSGT00390000009802.a #19 ENSGT00940000154766.a.a #21 ENSGT00940000155533.d #22 ENSGT00940000154952.a.b #24 ENSGT00940000154574.c #25 ENSGT00500000044852.a #26 ENSGT00390000012731.a.a #27 ENSGT00940000155171.a.b #28 ENSGT00390000000183 #29 ENSGT00550000074988 #30 ENSGT00390000014771.a #31 ENSGT01100000263477.E #32 ENSGT00940000158036 #33 ENSGT00940000155822 ENSGT01030000234607.A.a.a.a ENSGT00390000015121 ENSGT00910000148650 ENSGT00940000156424 Cetacea ANCESTRAL SPECIES 1 ENSGT00940000154187.a.b #9 ENSGT00940000157512 #10 ENSGT00940000159547.d ENSGT00390000013228.e.b ENSGT00730000111450.h ENSGT00940000155469 #11 ENSGT00940000160746 #12 ENSGT00390000018047 #13 ENSGT00940000160025 #14 ENSGT00940000158009 #15 ENSGT00390000012189 #17 ENSGT01090000260321 ENSGT00390000009802.b #18 ENSGT00390000009802.a #19 ENSGT00940000154766.a.a #21 ENSGT00940000155533.d #22 ENSGT00940000154952.a.b #24 ENSGT00940000154574.c #25 ENSGT00500000044852.a #26 ENSGT00390000012731.a.a #27 ENSGT00950000183198.c.b.a.t.a ENSGT00940000155171.a.b #28 ENSGT00390000000183 #29 ENSGT00550000074988 #30 ENSGT00390000014771.a #31 ENSGT01030000235349 ENSGT00940000158036 #33 ENSGT00940000155822 ENSGT01030000234607.A.a.a.a ENSGT00390000015121 ENSGT00940000156424 Odontoceti ANCESTRAL SPECIES 1 ENSGT00940000154187.a.b #9 ENSGT00940000157512 #10 ENSGT00940000159547.d ENSGT00390000013228.e.b ENSGT00730000111450.h ENSGT00940000155469 #11 ENSGT00940000160746 #12 ENSGT00390000018047 #13 ENSGT00940000160025 #14 ENSGT00940000158009 #15 ENSGT00390000012189 #17 ENSGT01090000260321 ENSGT00390000009802.b #18 ENSGT00390000009802.a #19 ENSGT00940000154766.a.a #21 ENSGT00940000155533.d #22 ENSGT00940000154952.a.b #24 ENSGT00940000154574.c #25 ENSGT00500000044852.a #26 ENSGT00390000012731.a.a #27 ENSGT00950000183198.c.b.a.t.a ENSGT00940000155171.a.b #28 ENSGT00390000000183 #29 ENSGT00550000074988 #30 ENSGT00390000014771.a #31 ENSGT00940000158036 #33 ENSGT00940000155822 ENSGT01030000234607.A.a.a.a ENSGT00390000015121 ENSGT00940000156424 ENSGT00940000157811 Odontoceti_a ANCESTRAL SPECIES 1 ENSGT00940000154187.a.a #7 ENSGT00940000154187.a.b #9 ENSGT00940000157512 #10 ENSGT00940000159547.d ENSGT00390000013228.e.b ENSGT00730000111450.h ENSGT00940000155469 #11 ENSGT00940000160746 #12 ENSGT00390000018047 #13 ENSGT00940000160025 #14 ENSGT00940000158009 #15 ENSGT00390000012189 #17 ENSGT00390000009802.b #18 ENSGT00390000009802.a #19 ENSGT00940000154766.a.a #21 ENSGT00940000155533.d #22 ENSGT00940000154952.a.b #24 ENSGT00940000154574.c #25 ENSGT00500000044852.a #26 ENSGT00390000012731.a.a #27 ENSGT00940000155171.a.b #28 ENSGT00390000000183 #29 ENSGT00550000074988 #30 ENSGT00390000014771.a #31 ENSGT00940000158036 #33 ENSGT00940000155822 ENSGT01030000234607.A.a.a.a ENSGT00390000015121 ENSGT00940000156424 ENSGT00940000157811 ENSGT00950000182886.b.b Odontoceti_b ANCESTRAL SPECIES 1 ENSGT00980000202649 ENSGT00940000154187.a.b #9 ENSGT00940000157512 #10 ENSGT00940000159547.d ENSGT00390000013228.e.b ENSGT00730000111450.h ENSGT00940000155469 #11 ENSGT00940000160746 #12 ENSGT00390000018047 #13 ENSGT00940000160025 #14 ENSGT00940000158009 #15 ENSGT00390000012189 #17 ENSGT00390000009802.b #18 ENSGT00390000009802.a #19 ENSGT00940000154766.a.a #21 ENSGT00940000155533.d #22 ENSGT00940000154952.a.b #24 ENSGT00940000154574.c #25 ENSGT00500000044852.a #26 ENSGT00390000012731.a.a #27 ENSGT00940000155171.a.b #28 ENSGT00390000000183 #29 ENSGT00550000074988 #30 ENSGT00390000014771.a #31 ENSGT00940000158036 #33 ENSGT00940000155822 ENSGT01030000234607.A.a.a.a ENSGT00390000015121 ENSGT00940000156424 ENSGT00940000157811 ENSGT00950000182886.b.b Monodontidae ANCESTRAL SPECIES 7 ENSGT00980000202649 ENSGT00940000154187.a.b #9 ENSGT00940000157512 #10 ENSGT00940000159547.d ENSGT00390000013228.e.b ENSGT00730000111450.h ENSGT00940000155469 #11 ENSGT00940000160746 #12 ENSGT00390000018047 #13 ENSGT00940000160025 #14 ENSGT00940000158009 #15 ENSGT00390000012189 #17 ENSGT00390000009802.b #18 ENSGT00390000009802.a #19 ENSGT00940000154766.a.a #21 ENSGT00940000155533.d #22 ENSGT00390000018829.g.b.d ENSGT00530000063929.a.a.e.b ENSGT00940000154952.a.b #24 ENSGT00940000154574.c #25 ENSGT00500000044852.a #26 ENSGT00390000012731.a.a #27 ENSGT00940000155171.a.b #28 ENSGT00390000000183 #29 ENSGT00550000074988 #30 ENSGT00390000014771.a #31 ENSGT00940000158036 #33 ENSGT00940000155822 ENSGT01030000234607.A.a.a.a ENSGT00390000015121 ENSGT00940000156424 Beluga whale MODERN SPECIES 16 ENSDLEG00000003035 ENSDLEG00000003030 MYO10 (ENSDLEG00000002973) #11 RETREG1 (ENSDLEG00000002953) #12 ZNF622 (ENSDLEG00000002935) #13 ENSDLEG00000002924 MARCHF11 (ENSDLEG00000002915) #14 FBXL7 (ENSDLEG00000002908) #15 ENSDLEG00000002904 ENSDLEG00000002893 ANKH (ENSDLEG00000002865) #17 OTULIN (ENSDLEG00000002839) #18 FAM105A (ENSDLEG00000002824) #19 TRIO (ENSDLEG00000001825) #21 ENSDLEG00000001564 DNAH5 (ENSDLEG00000001370) #22 ENSDLEG00000001339 ENSDLEG00000001324 ENSDLEG00000001313 CTNND2 (ENSDLEG00000001157) #24 ENSDLEG00000001124 DAP (ENSDLEG00000001108) #25 ANKRD33B (ENSDLEG00000001095) #26 ROPN1L (ENSDLEG00000001073) #27 MARCH6 (ENSDLEG00000000992) #28 CMBL (ENSDLEG00000000961) #29 CCT5 (ENSDLEG00000000940) #30 ATPSCKMT (ENSDLEG00000000926) #31 SEMA5A (ENSDLEG00000000752) #33 MTRR (ENSDLEG00000000694) FASTKD3 (ENSDLEG00000000670) Narwhal MODERN SPECIES 298 CDH18 (ENSMMNG00015007252) #10 ENSMMNG00015007206 ENSMMNG00015007196 ENSMMNG00015007183 BASP1 (ENSMMNG00015007172) MYO10 (ENSMMNG00015006986) #11 RETREG1 (ENSMMNG00015006854) #12 ZNF622 (ENSMMNG00015006807) #13 ENSMMNG00015006789 MARCHF11 (ENSMMNG00015006768) #14 FBXL7 (ENSMMNG00015006745) #15 ANKH (ENSMMNG00015006722) #17 OTULIN (ENSMMNG00015006695) #18 OTULINL (ENSMMNG00015006675) #19 TRIO (ENSMMNG00015006412) #21 DNAH5 (ENSMMNG00015006185) #22 ENSMMNG00015006148 ENSMMNG00015006124 CTNND2 (ENSMMNG00015005980) #24 DAP (ENSMMNG00015005933) #25 ANKRD33B (ENSMMNG00015005921) #26 ROPN1L (ENSMMNG00015005909) #27 MARCHF6 (ENSMMNG00015005820) #28 CMBL (ENSMMNG00015005779) #29 CCT5 (ENSMMNG00015005728) #30 ATPSCKMT (ENSMMNG00015005677) #31 SEMA5A (ENSMMNG00015005625) #33 ENSMMNG00015005605 ENSMMNG00015005590 MTRR (ENSMMNG00015005557) FASTKD3 (ENSMMNG00015005536) Vaquita MODERN SPECIES 14 CDH12 (ENSPSNG00000008078) #9 CDH18 (ENSPSNG00000008241) #10 ENSPSNG00000008306 ENSPSNG00000008390 BASP1 (ENSPSNG00000008407) MYO10 (ENSPSNG00000008517) #11 RETREG1 (ENSPSNG00000008600) #12 ZNF622 (ENSPSNG00000008731) #13 ENSPSNG00000008763 MARCHF11 (ENSPSNG00000008797) #14 FBXL7 (ENSPSNG00000008848) #15 ANKH (ENSPSNG00000000115) #17 OTULIN (ENSPSNG00000000165) #18 OTULINL (ENSPSNG00000000205) #19 TRIO (ENSPSNG00000000361) #21 DNAH5 (ENSPSNG00000000658) #22 CTNND2 (ENSPSNG00000000871) #24 ENSPSNG00000001006 ANKRD33B (ENSPSNG00000001044) #26 ROPN1L (ENSPSNG00000001126) #27 MARCHF6 (ENSPSNG00000001274) #28 CMBL (ENSPSNG00000001379) #29 CCT5 (ENSPSNG00000001419) #30 ATPSCKMT (ENSPSNG00000001462) #31 SEMA5A (ENSPSNG00000001504) #33 ENSPSNG00000001545 MTRR (ENSPSNG00000001565) FASTKD3 (ENSPSNG00000001602) CFAP90 (ENSPSNG00000001622) ADCY2 (ENSPSNG00000001660) TENT4A (ENSPSNG00000001714) Dolphin MODERN SPECIES 101 TRIO (ENSTTRG00000011119) #21 DNAH5 (ENSTTRG00000011115) #22 Sperm whale MODERN SPECIES 19 BASP1 (ENSPCTG00005003406) MYO10 (ENSPCTG00005003379) #11 ENSPCTG00005003348 #13 RETREG1 (ENSPCTG00005003333) #12 ENSPCTG00005003316 #13 ENSPCTG00005003299 ENSPCTG00005003297 MARCH11 (ENSPCTG00005003284) #14 FBXL7 (ENSPCTG00005003269) #15 ENSPCTG00005003250 ANKH (ENSPCTG00005003239) #17 ENSPCTG00005003233 OTULIN (ENSPCTG00005003221) #18 OTULINL (ENSPCTG00005003212) #19 TRIO (ENSPCTG00005003109) #21 DNAH5 (ENSPCTG00005003015) #22 ENSPCTG00005002988 ENSPCTG00005002979 ENSPCTG00005002965 CTNND2 (ENSPCTG00005002822) #24 DAP (ENSPCTG00005002789) #25 ANKRD33B (ENSPCTG00005002770) #26 ROPN1L (ENSPCTG00005002753) #27 ENSPCTG00005002747 MARCH6 (ENSPCTG00005002477) #28 CMBL (ENSPCTG00005002401) #29 CCT5 (ENSPCTG00005002365) #30 ATPSCKMT (ENSPCTG00005002344) #31 SEMA5A (ENSPCTG00005002330) #33 MTRR (ENSPCTG00005002314) FASTKD3 (ENSPCTG00005002301) Blue whale MODERN SPECIES 14 BASP1 (ENSBMSG00010017687) ENSBMSG00010017662 ENSBMSG00010017604 #11 ENSBMSG00010017567 RETREG1 (ENSBMSG00010017525) #12 ZNF622 (ENSBMSG00010017487) #13 ENSBMSG00010017471 ENSBMSG00010017457 MARCHF11 (ENSBMSG00010017427) #14 FBXL7 (ENSBMSG00010017389) #15 ANKH (ENSBMSG00010017320) #17 ENSBMSG00010017287 ENSBMSG00010017247 #18 OTULINL (ENSBMSG00010017214) #19 TRIO (ENSBMSG00010016884) #21 DNAH5 (ENSBMSG00010016560) #22 ENSBMSG00010016511 ENSBMSG00010016498 ENSBMSG00010016472 CTNND2 (ENSBMSG00010016138) #24 DAP (ENSBMSG00010016082) #25 ANKRD33B (ENSBMSG00010016062) #26 ROPN1L (ENSBMSG00010016036) #27 ENSBMSG00010016023 MARCHF6 (ENSBMSG00010015821) #28 CMBL (ENSBMSG00010015715) #29 CCT5 (ENSBMSG00010015626) #30 ATPSCKMT (ENSBMSG00010015593) #31 ENSBMSG00010015568 SEMA5A (ENSBMSG00010015493) #33 MTRR (ENSBMSG00010015453) Pecora ANCESTRAL SPECIES 25 ENSGT01070000254103 ENSGT00940000154187.a.b #9 ENSGT00940000157512 #10 ENSGT00940000159547.d ENSGT00390000013228.e.b ENSGT00730000111450.g.b ENSGT00940000155469 #11 ENSGT00940000160746 #12 ENSGT00390000018047 #13 ENSGT00940000160025 #14 ENSGT00940000158009 #15 ENSGT00390000012189 #17 ENSGT00390000009802.b #18 ENSGT00390000009802.a #19 ENSGT00940000154766.a.a #21 ENSGT00940000155533.d #22 ENSGT00940000154952.a.b #24 ENSGT00940000154574.c #25 ENSGT00500000044852.a #26 ENSGT00390000012731.a.a #27 ENSGT00940000155171.a.b #28 ENSGT00390000000183 #29 ENSGT00550000074988 #30 ENSGT00390000014771.a #31 ENSGT01100000263477.E #32 ENSGT00940000158036 #33 ENSGT00940000155822 ENSGT01030000234607.A.a.a.a ENSGT00390000015121 ENSGT00910000148650 ENSGT00940000156424 Percora_a ANCESTRAL SPECIES 26 ENSGT01070000254103 ENSGT00940000154187.a.b #9 ENSGT00940000157512 #10 ENSGT00940000159547.d ENSGT00390000013228.e.b ENSGT00730000111450.g.b ENSGT00940000155469 #11 ENSGT00940000160746 #12 ENSGT00390000018047 #13 ENSGT00940000160025 #14 ENSGT00940000158009 #15 ENSGT00390000012189 #17 ENSGT00390000009802.b #18 ENSGT00390000009802.a #19 ENSGT00940000154766.a.a #21 ENSGT00940000155533.d #22 ENSGT00940000154952.a.b #24 ENSGT00940000154574.c #25 ENSGT00500000044852.a #26 ENSGT00390000012731.a.a #27 ENSGT00940000155171.a.b #28 ENSGT00390000000183 #29 ENSGT00550000074988 #30 ENSGT00390000014771.a #31 ENSGT01100000263477.E #32 ENSGT00940000158036 #33 ENSGT00940000155822 ENSGT01030000234607.A.a.a.a ENSGT00390000015121 ENSGT00910000148650 ENSGT00940000156424 Bovidae ANCESTRAL SPECIES 26 ENSGT00940000157512 #10 ENSGT00940000154598.ac.a ENSGT00940000159547.d ENSGT00390000013228.e.b ENSGT00390000008610.a.b.a.a.a ENSGT00730000111450.g.b ENSGT00940000155469 #11 ENSGT00940000160746 #12 ENSGT00390000018047 #13 ENSGT00940000160025 #14 ENSGT00940000158009 #15 ENSGT00390000012189 #17 ENSGT00390000009802.b #18 ENSGT00390000009802.a #19 ENSGT00940000154766.a.a #21 ENSGT00940000155533.d #22 ENSGT00940000154952.a.b #24 ENSGT00940000154574.c #25 ENSGT00500000044852.a #26 ENSGT00390000012731.a.a #27 ENSGT00940000155171.a.b #28 ENSGT00390000000183 #29 ENSGT00550000074988 #30 ENSGT00390000014771.a #31 ENSGT01100000263477.E #32 ENSGT00940000158036 #33 ENSGT00940000155822 ENSGT01030000234607.A.a.a.a ENSGT00390000015121 ENSGT00910000148650 ENSGT00940000156424 Caprinae ANCESTRAL SPECIES 24 ENSGT00390000011864.e ENSGT00940000154187.a.b #9 ENSGT00940000157512 #10 ENSGT00940000154598.ac.a ENSGT00940000159547.d ENSGT00730000111450.g.b ENSGT00940000155469 #11 ENSGT00940000160746 #12 ENSGT00390000018047 #13 ENSGT00940000160025 #14 ENSGT00940000158009 #15 ENSGT00390000012189 #17 ENSGT00390000009802.b #18 ENSGT00390000009802.a #19 ENSGT00940000154766.a.a #21 ENSGT00940000155533.d #22 ENSGT00940000154952.a.b #24 ENSGT00940000154574.c #25 ENSGT00500000044852.a #26 ENSGT00390000012731.a.a #27 ENSGT00940000155171.a.b #28 ENSGT00390000000183 #29 ENSGT00550000074988 #30 ENSGT00390000014771.a #31 ENSGT01100000263477.E #32 ENSGT00940000158036 #33 ENSGT00940000155822 ENSGT01030000234607.A.a.a.a ENSGT00390000015121 ENSGT00940000156424 ENSGT01050000244868.a.a.a.b.a.b.a.a.a.a.b.d Goat MODERN SPECIES 12 ENSCHIG00000019812 ENSCHIG00000000477 ENSCHIG00000012577 BASP1 (ENSCHIG00000006852) ENSCHIG00000010404 MYO10 (ENSCHIG00000023439) #11 RETREG1 (ENSCHIG00000021819) #12 ZNF622 (ENSCHIG00000007951) #13 MARCHF11 (ENSCHIG00000018244) #14 FBXL7 (ENSCHIG00000011704) #15 ANKH (ENSCHIG00000019071) #17 OTULIN (ENSCHIG00000021689) #18 OTULINL (ENSCHIG00000000624) #19 TRIO (ENSCHIG00000016556) #21 ENSCHIG00000016462 DNAH5 (ENSCHIG00000021054) #22 CTNND2 (ENSCHIG00000013482) #24 DAP (ENSCHIG00000018806) #25 ANKRD33B (ENSCHIG00000021552) #26 ROPN1L (ENSCHIG00000024633) #27 MARCHF6 (ENSCHIG00000017175) #28 CMBL (ENSCHIG00000023506) #29 CCT5 (ENSCHIG00000018198) #30 ATPSCKMT (ENSCHIG00000018299) #31 ENSCHIG00000019011 SEMA5A (ENSCHIG00000013180) #33 ENSCHIG00000001904 MTRR (ENSCHIG00000019340) FASTKD3 (ENSCHIG00000018823) CFAP90 (ENSCHIG00000025918) ADCY2 (ENSCHIG00000023502) Rambouillet Sheep MODERN SPECIES 7 ENSOARG00020013447 CDH18 (ENSOARG00020013503) #10 ENSOARG00020013600 ENSOARG00020013658 ENSOARG00020013700 ENSOARG00020013742 MYO10 (ENSOARG00020013822) #11 RETREG1 (ENSOARG00020014626) #12 ZNF622 (ENSOARG00020014823) #13 MARCHF11 (ENSOARG00020014889) #14 FBXL7 (ENSOARG00020014968) #15 ANKH (ENSOARG00020015114) #17 OTULIN (ENSOARG00020015362) #18 OTULINL (ENSOARG00020015405) #19 TRIO (ENSOARG00020015605) #21 DNAH5 (ENSOARG00020019327) #22 ENSOARG00020019873 CTNND2 (ENSOARG00020019950) #24 ENSOARG00020020806 DAP (ENSOARG00020020846) #25 MARCHF6 (ENSOARG00020020993) #28 CMBL (ENSOARG00020021802) #29 CCT5 (ENSOARG00020021843) #30 ATPSCKMT (ENSOARG00020021986) #31 ENSOARG00020022027 #32 SEMA5A (ENSOARG00020022080) #33 ENSOARG00020022435 MTRR (ENSOARG00020022449) FASTKD3 (ENSOARG00020022521) CFAP90 (ENSOARG00020022548) ADCY2 (ENSOARG00020022595) Bovinae ANCESTRAL SPECIES 25 ENSGT00940000154509.y.b.b ENSGT00940000157512 #10 ENSGT00940000154598.ac.a ENSGT00940000159547.d ENSGT00390000013228.e.b ENSGT00730000111450.g.b ENSGT00940000155469 #11 ENSGT00940000160746 #12 ENSGT00390000018047 #13 ENSGT00940000160025 #14 ENSGT00940000158009 #15 ENSGT00390000012189 #17 ENSGT00390000009802.b #18 ENSGT00390000009802.a #19 ENSGT00940000154766.a.a #21 ENSGT00940000155533.d #22 ENSGT00940000154952.a.b #24 ENSGT00940000154574.c #25 ENSGT00500000044852.a #26 ENSGT00390000012731.a.a #27 ENSGT00940000155171.a.b #28 ENSGT00390000000183 #29 ENSGT00550000074988 #30 ENSGT00390000014771.a #31 ENSGT01100000263477.E #32 ENSGT00940000158036 #33 ENSGT00940000155822 ENSGT01030000234607.A.a.a.a ENSGT00390000015121 ENSGT00910000148650 ENSGT00940000156424 Bos ANCESTRAL SPECIES 26 ENSGT00940000154187.a.b #9 ENSGT00940000154509.y.b.b ENSGT00940000157512 #10 ENSGT00940000159547.d ENSGT00390000013228.e.b.a ENSGT00730000111450.g.b ENSGT00940000155469 #11 ENSGT00940000160746 #12 ENSGT00390000018047 #13 ENSGT00940000160025 #14 ENSGT00940000158009 #15 ENSGT00390000012189 #17 ENSGT00390000009802.b #18 ENSGT00390000009802.a #19 ENSGT00940000154766.a.a #21 ENSGT00940000155533.d #22 ENSGT00940000154952.a.b #24 ENSGT00940000154574.c #25 ENSGT00500000044852.a #26 ENSGT00390000012731.a.a #27 ENSGT00940000155171.a.b #28 ENSGT00390000000183 #29 ENSGT00550000074988 #30 ENSGT00390000014771.a #31 ENSGT01100000263477.E #32 ENSGT00940000158036 #33 ENSGT00940000155822 ENSGT01030000234607.A.a.a.a ENSGT00390000015121 ENSGT00940000156424 ENSGT01050000244868.a.a.a.b.a.b.a.a.a.a.b.d Bos_a ANCESTRAL SPECIES 38 ENSGT00940000154187.a.b #9 ENSGT00940000154509.y.b.b ENSGT00940000157512 #10 ENSGT00940000159547.d ENSGT00390000013228.e.b.a ENSGT00730000111450.g.b ENSGT00940000155469 #11 ENSGT00940000160746 #12 ENSGT00390000018047 #13 ENSGT00940000160025 #14 ENSGT00940000158009 #15 ENSGT00390000012189 #17 ENSGT00390000009802.b #18 ENSGT00390000009802.a #19 ENSGT00940000154766.a.a #21 ENSGT00940000155533.d #22 ENSGT00940000154952.a.b #24 ENSGT00940000154574.c #25 ENSGT00500000044852.a #26 ENSGT00390000012731.a.a #27 ENSGT00940000155171.a.b #28 ENSGT00390000000183 #29 ENSGT00550000074988 #30 ENSGT00390000014771.a #31 ENSGT01100000263477.E #32 ENSGT00940000158036 #33 ENSGT00940000155822 ENSGT01030000234607.A.a.a.a ENSGT00390000015121 ENSGT00940000156424 ENSGT00940000157811 Wild yak MODERN SPECIES 40 OTULIN (ENSBMUG00000025500) #18 OTULINL (ENSBMUG00000025496) #19 ENSBMUG00000025491 #21 ENSBMUG00000025487 #21 DNAH5 (ENSBMUG00000025479) #22 Domestic yak MODERN SPECIES 15 ENSBGRG00000007130 CDH18 (ENSBGRG00000006988) #10 ENSBGRG00000021278 ENSBGRG00000021130 ENSBGRG00000021114 MYO10 (ENSBGRG00000020569) #11 FAM134B (ENSBGRG00000020222) #12 ZNF622 (ENSBGRG00000020128) #13 MARCHF11 (ENSBGRG00000020077) #14 FBXL7 (ENSBGRG00000020043) #15 ANKH (ENSBGRG00000019829) #17 OTULIN (ENSBGRG00000019637) #18 OTULINL (ENSBGRG00000019549) #19 ENSBGRG00000019222 #21 ENSBGRG00000018948 #21 DNAH5 (ENSBGRG00000018062) #22 ENSBGRG00000017939 CTNND2 (ENSBGRG00000016883) #24 ENSBGRG00000016754 #25 ANKRD33B (ENSBGRG00000016682) #26 MARCHF6 (ENSBGRG00000013423) #28 CMBL (ENSBGRG00000013187) #29 CCT5 (ENSBGRG00000012720) #30 ATPSCKMT (ENSBGRG00000012505) #31 ENSBGRG00000012367 SEMA5A (ENSBGRG00000011867) #33 MTRR (ENSBGRG00000011588) FASTKD3 (ENSBGRG00000011515) CFAP90 (ENSBGRG00000011468) ADCY2 (ENSBGRG00000009979) TENT4A (ENSBGRG00000009794) Bos_b ANCESTRAL SPECIES 29 ENSGT00940000154187.a.b #9 ENSGT00940000154509.y.b.b ENSGT00940000157512 #10 ENSGT00940000159547.d ENSGT00390000013228.e.b.a ENSGT00730000111450.g.b ENSGT00940000155469 #11 ENSGT00940000160746 #12 ENSGT00390000018047 #13 ENSGT00940000160025 #14 ENSGT00940000158009 #15 ENSGT00390000012189 #17 ENSGT00390000009802.b #18 ENSGT00390000009802.a #19 ENSGT00940000154766.a.a #21 ENSGT00940000155533.d #22 ENSGT00940000154952.a.b #24 ENSGT00940000154574.c #25 ENSGT00500000044852.a #26 ENSGT00390000012731.a.a #27 ENSGT00940000155171.a.b #28 ENSGT00390000000183 #29 ENSGT00550000074988 #30 ENSGT00390000014771.a #31 ENSGT01100000263477.E #32 ENSGT01100000263481.n.a.a.a.a.a.a.b.b.a.a.b.b ENSGT00940000158036 #33 ENSGT00940000155822 ENSGT01030000234607.A.a.a.a ENSGT00390000015121 ENSGT00940000156424 Hybrid Bos Indicus MODERN SPECIES 12 ENSBIXG00005030260 ENSBIXG00005030265 ENSBIXG00005030286 MYO10 (ENSBIXG00005030308) #11 RETREG1 (ENSBIXG00005030325) #12 ZNF622 (ENSBIXG00005030343) #13 MARCHF11 (ENSBIXG00005030353) #14 FBXL7 (ENSBIXG00005030372) #15 ENSBIXG00005030392 ANKH (ENSBIXG00005030407) #17 OTULIN (ENSBIXG00005030412) #18 OTULINL (ENSBIXG00005030429) #19 ENSBIXG00005030443 #21 ENSBIXG00005030459 #21 ENSBIXG00005030473 DNAH5 (ENSBIXG00005030493) #22 CTNND2 (ENSBIXG00005005195) #24 ENSBIXG00005005156 #25 ANKRD33B (ENSBIXG00005001972) #26 ROPN1L (ENSBIXG00005002000) #27 MARCHF6 (ENSBIXG00005005112) #28 ENSBIXG00005005028 #29 CCT5 (ENSBIXG00005005013) #30 ATPSCKMT (ENSBIXG00005028756) #31 TAS2R1 (ENSBIXG00005028671) #32 ENSBIXG00005028663 ENSBIXG00005002382 MTRR (ENSBIXG00005006640) FASTKD3 (ENSBIXG00005028543) CFAP90 (ENSBIXG00005006543) ADCY2 (ENSBIXG00005028463) Cow MODERN SPECIES 12 ENSBTAG00000053920 ENSBTAG00000055246 ENSBTAG00000049518 ENSBTAG00000053528 BASP1 (ENSBTAG00000048565) MYO10 (ENSBTAG00000020126) #11 RETREG1 (ENSBTAG00000016444) #12 ZNF622 (ENSBTAG00000016441) #13 MARCHF11 (ENSBTAG00000037576) #14 FBXL7 (ENSBTAG00000003219) #15 ANKH (ENSBTAG00000013391) #17 OTULIN (ENSBTAG00000003186) #18 OTULINL (ENSBTAG00000000672) #19 TRIO (ENSBTAG00000005514) #21 ENSBTAG00000054860 DNAH5 (ENSBTAG00000021972) #22 ENSBTAG00000053006 ENSBTAG00000049263 CTNND2 (ENSBTAG00000017222) #24 DAP (ENSBTAG00000006346) #25 ANKRD33B (ENSBTAG00000011337) #26 ROPN1L (ENSBTAG00000003539) #27 MARCHF6 (ENSBTAG00000003536) #28 CMBL (ENSBTAG00000010801) #29 CCT5 (ENSBTAG00000017889) #30 ATPSCKMT (ENSBTAG00000017885) #31 TAS2R1 (ENSBTAG00000032508) #32 ENSBTAG00000052324 SEMA5A (ENSBTAG00000005021) #33 ENSBTAG00000051674 MTRR (ENSBTAG00000009401) American bison MODERN SPECIES 3308 ENSBBBG00000020182 MYO10 (ENSBBBG00000007383) #11 RETREG1 (ENSBBBG00000020337) #12 ZNF622 (ENSBBBG00000020347) #13 MARCHF11 (ENSBBBG00000005507) #14 FBXL7 (ENSBBBG00000020366) #15 ANKH (ENSBBBG00000020391) #17 OTULIN (ENSBBBG00000005517) #18 OTULINL (ENSBBBG00000020414) #19 TRIO (ENSBBBG00000005564) #21 DNAH5 (ENSBBBG00000020759) #22 Siberian musk deer MODERN SPECIES 1233 ENSMMSG00000022750 ENSMMSG00000022739 ENSMMSG00000022732 BASP1 (ENSMMSG00000022727) MYO10 (ENSMMSG00000022680) #11 RETREG1 (ENSMMSG00000022645) #12 ZNF622 (ENSMMSG00000022625) #13 MARCHF11 (ENSMMSG00000022610) #14 FBXL7 (ENSMMSG00000022595) #15 ANKH (ENSMMSG00000022568) #17 OTULIN (ENSMMSG00000022546) #18 OTULINL (ENSMMSG00000022534) #19 ENSMMSG00000022506 #21 ENSMMSG00000022496 ENSMMSG00000022427 DNAH5 (ENSMMSG00000022273) #22 CTNND2 (ENSMMSG00000022008) #24 ENSMMSG00000021978 DAP (ENSMMSG00000021965) #25 ANKRD33B (ENSMMSG00000021936) #26 ROPN1L (ENSMMSG00000021911) #27 MARCHF6 (ENSMMSG00000021699) #28 CMBL (ENSMMSG00000021656) #29 CCT5 (ENSMMSG00000021573) #30 ATPSCKMT (ENSMMSG00000021397) #31 ENSMMSG00000021350 #32 ENSMMSG00000021301 SEMA5A (ENSMMSG00000021177) #33 MTRR (ENSMMSG00000021088) FASTKD3 (ENSMMSG00000021063) CFAP90 (ENSMMSG00000021039) Yarkand deer MODERN SPECIES 17 ENSCHYG00000010075 ENSCHYG00000010107 MYO10 (ENSCHYG00000010240) #11 RETREG1 (ENSCHYG00000012421) #12 ZNF622 (ENSCHYG00000012501) #13 MARCHF11 (ENSCHYG00000012594) #14 FBXL7 (ENSCHYG00000012633) #15 ENSCHYG00000012770 ANKH (ENSCHYG00000012797) #17 OTULIN (ENSCHYG00000012858) #18 ENSCHYG00000012895 OTULINL (ENSCHYG00000012915) #19 ENSCHYG00000012999 #21 ENSCHYG00000013264 ENSCHYG00000013334 #21 DNAH5 (ENSCHYG00000013613) #22 CTNND2 (ENSCHYG00000014547) #24 ENSCHYG00000014724 ENSCHYG00000014792 DAP (ENSCHYG00000014843) #25 ANKRD33B (ENSCHYG00000014906) #26 MARCHF6 (ENSCHYG00000015092) #28 CMBL (ENSCHYG00000016335) #29 ENSCHYG00000016373 #30 ATPSCKMT (ENSCHYG00000016616) #31 ENSCHYG00000016710 TAS2R1 (ENSCHYG00000016763) #32 SEMA5A (ENSCHYG00000016807) #33 MTRR (ENSCHYG00000016969) FASTKD3 (ENSCHYG00000017127) CFAP90 (ENSCHYG00000017169) Camelidae ANCESTRAL SPECIES 1 ENSGT00940000157512 #10 ENSGT00940000159547.d ENSGT00730000111450.h ENSGT00940000155469 #11 ENSGT00940000160746 #12 ENSGT00390000018047.m.b #13 ENSGT00390000018047.m.a #13 ENSGT00940000160025 #14 ENSGT00940000158009 #15 ENSGT00390000012189 #17 ENSGT01090000260321 ENSGT00390000009802.b #18 ENSGT00390000009802.a #19 ENSGT00940000166969.b ENSGT00940000154766.a.a #21 ENSGT00940000155533.d #22 ENSGT00940000154952.a.b #24 ENSGT00940000154574.c #25 ENSGT00500000044852.a #26 ENSGT00390000012731.a.a #27 ENSGT00940000155171.a.b #28 ENSGT00390000000183 #29 ENSGT00550000074988 #30 ENSGT00390000014771.a #31 ENSGT01100000263477.E #32 ENSGT00940000158036 #33 ENSGT00940000155822 ENSGT01030000234607.A.a.a.a ENSGT00390000015121 ENSGT00940000156424 ENSGT00940000157811 Arabian camel MODERN SPECIES 22 ENSCDRG00005002502 ENSCDRG00005002517 MYO10 (ENSCDRG00005002542) #11 RETREG1 (ENSCDRG00005002579) #12 ENSCDRG00005002600 #13 ENSCDRG00005002615 #13 MARCHF11 (ENSCDRG00005002629) #14 FBXL7 (ENSCDRG00005002650) #15 ANKH (ENSCDRG00005002678) #17 ENSCDRG00005002709 OTULIN (ENSCDRG00005002724) #18 OTULINL (ENSCDRG00005002746) #19 ENSCDRG00005002774 #21 ENSCDRG00005002834 ENSCDRG00005002883 #21 DNAH5 (ENSCDRG00005002951) #22 CTNND2 (ENSCDRG00005003082) #24 DAP (ENSCDRG00005003120) #25 ANKRD33B (ENSCDRG00005003131) #26 ROPN1L (ENSCDRG00005003147) #27 MARCHF6 (ENSCDRG00005003229) #28 CMBL (ENSCDRG00005003573) #29 CCT5 (ENSCDRG00005003627) #30 ATPSCKMT (ENSCDRG00005003839) #31 TAS2R1 (ENSCDRG00005003868) #32 SEMA5A (ENSCDRG00005003914) #33 ENSCDRG00005004152 MTRR (ENSCDRG00005004184) FASTKD3 (ENSCDRG00005004222) CFAP90 (ENSCDRG00005004257) ADCY2 (ENSCDRG00005004299) Alpaca MODERN SPECIES 279 DNAH5 (ENSVPAG00000000265) #22 Laurasiatheria_b ANCESTRAL SPECIES 9 ENSGT00940000154187.a.b #9 ENSGT00940000157512 #10 ENSGT00940000159547.d ENSGT00730000111450 ENSGT00940000155469 #11 ENSGT00940000160746 #12 ENSGT00390000018047 #13 ENSGT00940000160025 #14 ENSGT00940000158009 #15 ENSGT00390000012189 #17 ENSGT01090000260321 ENSGT00390000009802.b #18 ENSGT00390000009802.a #19 ENSGT00940000166969.b ENSGT00940000154766.a.a #21 ENSGT00940000155533.d #22 ENSGT00940000154952.a.b #24 ENSGT00940000154574.c #25 ENSGT00500000044852.a #26 ENSGT00390000012731.a.a #27 ENSGT00940000155171.a.b #28 ENSGT00940000155171.a.a ##28 ENSGT00390000000183 #29 ENSGT00550000074988 #30 ENSGT00390000014771.a #31 ENSGT01100000263477.E #32 ENSGT00940000158036 #33 ENSGT00940000155822 ENSGT01030000234607.A.a.a.a ENSGT00390000015121 ENSGT00940000156424 Laurasiatheria_c ANCESTRAL SPECIES 7 ENSGT00940000154187.a.a #7 ENSGT00940000154187.a.b #9 ENSGT00940000157512 #10 ENSGT00390000013228.e.b ENSGT00730000111450 ENSGT00940000155469 #11 ENSGT00940000160746 #12 ENSGT00390000018047 #13 ENSGT00940000160025 #14 ENSGT00940000158009 #15 ENSGT00390000012189 #17 ENSGT01090000260321 ENSGT00390000009802.b #18 ENSGT00390000009802.a #19 ENSGT00940000154766.a.a #21 ENSGT00940000155533.d #22 ENSGT00940000154952.a.b #24 ENSGT00940000154574.c #25 ENSGT00500000044852.a #26 ENSGT00390000012731.a.a #27 ENSGT00940000155171.a.b #28 ENSGT00390000000183 #29 ENSGT00550000074988 #30 ENSGT00390000014771.a #31 ENSGT01100000263477.E #32 ENSGT00940000158036 #33 ENSGT00940000155822 ENSGT01030000234607.A.a.a.a ENSGT00390000015121 ENSGT00940000156424 ENSGT00940000157811 Chiroptera ANCESTRAL SPECIES 1 ENSGT00940000154187.a.a #7 ENSGT00940000154673.b ENSGT00940000154187.a.b #9 ENSGT00940000157512 #10 ENSGT00390000013228.e.b ENSGT00730000111450 ENSGT00940000155469 #11 ENSGT00940000160746 #12 ENSGT00390000018047 #13 ENSGT00940000160025 #14 ENSGT00940000158009 #15 ENSGT00390000012189 #17 ENSGT00390000009802.b #18 ENSGT00390000009802.a #19 ENSGT00940000154766.a.a #21 ENSGT00940000155533.d #22 ENSGT00940000154952.a.b #24 ENSGT00940000154574.c #25 ENSGT00500000044852.a #26 ENSGT00390000012731.a.a #27 ENSGT00940000155171.a.b #28 ENSGT00390000000183 #29 ENSGT00550000074988 #30 ENSGT00390000014771.a #31 ENSGT01100000263477.E #32 ENSGT00940000158036 #33 ENSGT00940000155822 ENSGT01030000234607.A.a.a.a ENSGT00390000015121 ENSGT00940000156424 ENSGT00940000157811 Megabat MODERN SPECIES 545 DNAH5 (ENSPVAG00000012440) #22 Microchiroptera ANCESTRAL SPECIES 3 ENSGT00940000154187.a.a #7 ENSGT00940000154673.b ENSGT00940000154187.a.b #9 ENSGT00940000157512 #10 ENSGT00390000013228.e.b ENSGT00730000111450 ENSGT00940000155469 #11 ENSGT00940000160746 #12 ENSGT00390000018047 #13 ENSGT00940000160025 #14 ENSGT00940000158009 #15 ENSGT00390000012189 #17 ENSGT00390000009802.b #18 ENSGT00390000009802.a #19 ENSGT00940000154766.a.a #21 ENSGT00940000155533.d #22 ENSGT00940000154952.a.b #24 ENSGT00940000154574.c #25 ENSGT00500000044852.a #26 ENSGT00390000012731.a.a #27 ENSGT00940000155171.a.b #28 ENSGT00390000000183 #29 ENSGT00550000074988 #30 ENSGT00390000014771.a #31 ENSGT01100000263477.E #32 ENSGT00940000158036 #33 ENSGT00940000155822 ENSGT01030000234607.A.a.a.a ENSGT00390000015121 ENSGT00940000156424 ENSGT00940000157811 Microbat MODERN SPECIES 937 ENSMLUG00000006406 CDH18 (ENSMLUG00000007826) #10 ENSMLUG00000027425 BASP1 (ENSMLUG00000023928) ENSMLUG00000024599 MYO10 (ENSMLUG00000009101) #11 RETREG1 (ENSMLUG00000007101) #12 MARCHF11 (ENSMLUG00000003673) #14 ZNF622 (ENSMLUG00000007088) #13 MYADM (ENSMLUG00000015492) FBXL7 (ENSMLUG00000007857) #15 ANKH (ENSMLUG00000005172) #17 OTULIN (ENSMLUG00000000810) #18 OTULINL (ENSMLUG00000000804) #19 TRIO (ENSMLUG00000000763) #21 DNAH5 (ENSMLUG00000003652) #22 CTNND2 (ENSMLUG00000000833) #24 Greater horseshoe bat MODERN SPECIES 25 CDH18 (ENSRFEG00010004292) #10 BASP1 (ENSRFEG00010004237) ENSRFEG00010004228 MYO10 (ENSRFEG00010004145) #11 ENSRFEG00010004116 RETREG1 (ENSRFEG00010004080) #12 ZNF622 (ENSRFEG00010004066) #13 MARCHF11 (ENSRFEG00010004055) #14 FBXL7 (ENSRFEG00010004038) #15 ENSRFEG00010004021 ANKH (ENSRFEG00010003994) #17 OTULIN (ENSRFEG00010003972) #18 ENSRFEG00010003959 OTULINL (ENSRFEG00010003944) #19 TRIO (ENSRFEG00010003793) #21 DNAH5 (ENSRFEG00010003650) #22 CTNND2 (ENSRFEG00010003516) #24 DAP (ENSRFEG00010003456) #25 ANKRD33B (ENSRFEG00010003433) #26 ROPN1L (ENSRFEG00010003413) #27 MARCHF6 (ENSRFEG00010003360) #28 CMBL (ENSRFEG00010003311) #29 CCT5 (ENSRFEG00010003237) #30 ATPSCKMT (ENSRFEG00010003174) #31 TAS2R1 (ENSRFEG00010003156) #32 SEMA5A (ENSRFEG00010003116) #33 MTRR (ENSRFEG00010003071) FASTKD3 (ENSRFEG00010003029) CFAP90 (ENSRFEG00010003003) ADCY2 (ENSRFEG00010002967) TENT4A (ENSRFEG00010002900) Equus ANCESTRAL SPECIES 23 ENSGT00940000154187.a.a #7 ENSGT00940000154187.a.b #9 ENSGT00940000157512 #10 ENSGT00390000013228.e.b ENSGT00730000111450 ENSGT00940000155469 #11 ENSGT00940000160746 #12 ENSGT00390000018047 #13 ENSGT00940000160025 #14 ENSGT00940000158009 #15 ENSGT00390000012189 #17 ENSGT01090000260321 ENSGT00390000009802.b #18 ENSGT00390000009802.a #19 ENSGT00940000154766.a.a #21 ENSGT00940000155533.d #22 ENSGT00940000154952.a.b #24 ENSGT00940000154574.c #25 ENSGT00500000044852.a #26 ENSGT00390000012731.a.a #27 ENSGT00940000155171.a.b #28 ENSGT00390000000183 #29 ENSGT00550000074988 #30 ENSGT00390000014771.a #31 ENSGT01100000263477.E #32 ENSGT00940000158036 #33 ENSGT00940000155163.a.a ENSGT00940000155822 ENSGT01030000234607.A.a.a.a ENSGT00390000015121 ENSGT00940000156424 Donkey MODERN SPECIES 1 CDH10 (ENSEASG00005007161) #7 CDH12 (ENSEASG00005007168) #9 CDH18 (ENSEASG00005007180) #10 ENSEASG00005007184 BASP1 (ENSEASG00005026829) MYO10 (ENSEASG00005007206) #11 RETREG1 (ENSEASG00005029345) #12 ZNF622 (ENSEASG00005007253) #13 ENSEASG00005033563 MARCHF11 (ENSEASG00005038351) #14 FBXL7 (ENSEASG00005038620) #15 ANKH (ENSEASG00005017738) #17 OTULIN (ENSEASG00005017769) #18 OTULINL (ENSEASG00005017778) #19 TRIO (ENSEASG00005017933) #21 DNAH5 (ENSEASG00005018225) #22 CTNND2 (ENSEASG00005018602) #24 DAP (ENSEASG00005037402) #25 ANKRD33B (ENSEASG00005033374) #26 ROPN1L (ENSEASG00005018599) #27 MARCHF6 (ENSEASG00005018598) #28 CMBL (ENSEASG00005018596) #29 CCT5 (ENSEASG00005018595) #30 ATPSCKMT (ENSEASG00005018594) #31 TAS2R1 (ENSEASG00005018593) #32 SEMA5A (ENSEASG00005018591) #33 ENSEASG00005026990 MTRR (ENSEASG00005018589) FASTKD3 (ENSEASG00005018587) CFAP90 (ENSEASG00005024888) ADCY2 (ENSEASG00005018584) Horse MODERN SPECIES 13 CDH10 (ENSECAG00000004842) #7 CDH12 (ENSECAG00000014223) #9 CDH18 (ENSECAG00000019320) #10 ENSECAG00000005030 BASP1 (ENSECAG00000040740) MYO10 (ENSECAG00000007941) #11 RETREG1 (ENSECAG00000016899) #12 ZNF622 (ENSECAG00000020350) #13 MARCHF11 (ENSECAG00000024858) #14 FBXL7 (ENSECAG00000005529) #15 ANKH (ENSECAG00000006338) #17 OTULIN (ENSECAG00000016599) #18 ENSECAG00000057645 OTULINL (ENSECAG00000017059) #19 TRIO (ENSECAG00000019952) #21 DNAH5 (ENSECAG00000014954) #22 ENSECAG00000048274 CTNND2 (ENSECAG00000010901) #24 ENSECAG00000043848 DAP (ENSECAG00000031921) #25 ANKRD33B (ENSECAG00000033821) #26 ROPN1L (ENSECAG00000011750) #27 ENSECAG00000047348 MARCHF6 (ENSECAG00000012069) #28 CMBL (ENSECAG00000015898) #29 CCT5 (ENSECAG00000019192) #30 ATPSCKMT (ENSECAG00000013194) #31 TAS2R1 (ENSECAG00000005160) #32 SEMA5A (ENSECAG00000016241) #33 ENSECAG00000045308 ENSECAG00000048611 Carnivora ANCESTRAL SPECIES 8 ENSGT00940000154187.a.b #9 ENSGT00940000157512 #10 ENSGT00940000159547.d ENSGT00730000111450 ENSGT00940000155469 #11 ENSGT00940000160746 #12 ENSGT00390000018047 #13 ENSGT00940000160025 #14 ENSGT00940000158009 #15 ENSGT00390000012189 #17 ENSGT01090000260321 ENSGT00390000009802.b #18 ENSGT00390000009802.a #19 ENSGT00940000166969.b ENSGT00940000154766.a.a #21 ENSGT00940000155533.d #22 ENSGT00940000154952.a.b #24 ENSGT00940000154574.c #25 ENSGT00500000044852.a #26 ENSGT00390000012731.a.a #27 ENSGT00940000155171.a.b #28 ENSGT00940000155171.a.a ##28 ENSGT00390000000183 #29 ENSGT00550000074988 #30 ENSGT00390000014771.a #31 ENSGT00950000183210.d.a.c.a.a.a ENSGT01100000263477.E #32 ENSGT00940000158036 #33 ENSGT00940000155822 ENSGT01030000234607.A.a.a.a ENSGT00390000015121 Caniformia ANCESTRAL SPECIES 5 ENSGT00940000154187.a.b #9 ENSGT00940000157512 #10 ENSGT00940000159547.d ENSGT00730000111450 ENSGT00940000155469 #11 ENSGT00940000160746 #12 ENSGT00390000018047 #13 ENSGT00940000160025 #14 ENSGT00940000158009 #15 ENSGT00390000012189 #17 ENSGT01090000260321 ENSGT00390000009802.b #18 ENSGT00390000009802.a #19 ENSGT00940000166969.b ENSGT00940000154766.a.a #21 ENSGT00940000155533.d #22 ENSGT00940000154952.a.b #24 ENSGT00940000154574.c #25 ENSGT00500000044852.a #26 ENSGT00390000012731.a.a #27 ENSGT00940000155171.a.b #28 ENSGT00390000000183 #29 ENSGT00550000074988 #30 ENSGT00390000014771.a #31 ENSGT00950000183210.d.a.c.a.a.a ENSGT01100000263477.E #32 ENSGT00940000158036 #33 ENSGT00940000155822 ENSGT01030000234607.A.a.a.a ENSGT00390000015121 ENSGT00940000156424 Caniformia_b ANCESTRAL SPECIES 4 ENSGT00940000154187.a.a #7 ENSGT00940000154187.a.b #9 ENSGT00940000157512 #10 ENSGT00940000159547.d ENSGT00730000111450.j ENSGT00940000155469 #11 ENSGT00940000160746 #12 ENSGT00390000018047 #13 ENSGT00940000160025 #14 ENSGT00940000158009 #15 ENSGT00390000012189 #17 ENSGT01090000260321 ENSGT00390000009802.b #18 ENSGT00390000009802.a #19 ENSGT00940000154766.a.a #21 ENSGT00940000155533.d #22 ENSGT00940000154952.a.b #24 ENSGT00940000154574.c.d #25 ENSGT00500000044852.a #26 ENSGT00390000012731.a.a #27 ENSGT00940000155171.a.b #28 ENSGT00390000000183 #29 ENSGT00550000074988 #30 ENSGT00390000014771.a #31 ENSGT00950000183210.d.a.c.a.a.a ENSGT01100000263477.E #32 ENSGT00940000158036 #33 ENSGT00940000155822 ENSGT01030000234607.A.a.a.a ENSGT00390000015121 ENSGT00940000156424 Ursidae ANCESTRAL SPECIES 24 ENSGT00940000154187.a.a.g #7 ENSGT00940000154187.a.b #9 ENSGT00940000157512 #10 ENSGT00940000159547.d ENSGT00730000111450.j ENSGT00940000155469 #11 ENSGT00940000160746 #12 ENSGT00390000018047 #13 ENSGT00940000160025 #14 ENSGT00940000158009 #15 ENSGT00390000012189 #17 ENSGT01090000260321 ENSGT00390000009802.b #18 ENSGT00390000009802.a #19 ENSGT00940000154766.a.a.p #21 ENSGT00940000155533.d #22 ENSGT00940000154952.a.b #24 ENSGT00940000154574.c.d #25 ENSGT00500000044852.a #26 ENSGT00390000012731.a.a #27 ENSGT00940000155171.a.b #28 ENSGT00390000000183 #29 ENSGT00550000074988 #30 ENSGT00390000014771.a #31 ENSGT00950000183210.d.a.c.a.a.a ENSGT01100000263477.E #32 ENSGT00940000158036 #33 ENSGT00940000155822 ENSGT01030000234607.A.a.a.a ENSGT00390000015121 ENSGT00940000156424 Ursus ANCESTRAL SPECIES 114 ENSGT00940000157512 #10 ENSGT00940000159547.d ENSGT00940000155469 #11 ENSGT00940000160746 #12 ENSGT00390000018047 #13 ENSGT00940000158009 #15 ENSGT00390000012189 #17 ENSGT01090000260321 ENSGT00390000009802.b #18 ENSGT00390000009802.a #19 ENSGT00940000154766.a.a.p #21 ENSGT00940000155533.d #22 ENSGT00940000154952.a.b #24 ENSGT01090000260283 ENSGT00500000044852.a #26 ENSGT00390000012731.a.a #27 ENSGT00940000155171.a.b #28 ENSGT00390000000183 #29 ENSGT00550000074988 #30 ENSGT00390000014771.a #31 ENSGT01100000263477.E #32 ENSGT00940000158036 #33 ENSGT00940000155822 ENSGT01030000234607.A.a.a.a ENSGT00390000015121 ENSGT00940000156424 ENSGT00940000157811 Polar bear MODERN SPECIES 165 ENSUMAG00000021221 ENSUMAG00000021225 CDH18 (ENSUMAG00000021239) #10 ENSUMAG00000021260 MYO10 (ENSUMAG00000021360) #11 RETREG1 (ENSUMAG00000021712) #12 ZNF622 (ENSUMAG00000021715) #13 FBXL7 (ENSUMAG00000021723) #15 ENSUMAG00000021730 ANKH (ENSUMAG00000021732) #17 ENSUMAG00000021737 OTULIN (ENSUMAG00000021740) #18 OTULINL (ENSUMAG00000021747) #19 TRIO (ENSUMAG00000021795) #21 DNAH5 (ENSUMAG00000021992) #22 ENSUMAG00000021996 #24 ENSUMAG00000022008 #24 ENSUMAG00000022022 ENSUMAG00000022025 #26 ROPN1L (ENSUMAG00000022032) #27 MARCHF6 (ENSUMAG00000022100) #28 CMBL (ENSUMAG00000022374) #29 CCT5 (ENSUMAG00000022376) #30 ATPSCKMT (ENSUMAG00000022378) #31 TAS2R1 (ENSUMAG00000022381) #32 SEMA5A (ENSUMAG00000022395) #33 ENSUMAG00000022414 #16 MTRR (ENSUMAG00000022419) FASTKD3 (ENSUMAG00000022424) CFAP90 (ENSUMAG00000022426) American black bear MODERN SPECIES 6872 ENSUAMG00000028302 #22 Giant Panda MODERN SPECIES 13 CDH12 (ENSAMEG00000030530) #9 CDH18 (ENSAMEG00000007705) #10 ENSAMEG00000024937 ENSAMEG00000019207 ENSAMEG00000026804 MYO10 (ENSAMEG00000015404) #11 RETREG1 (ENSAMEG00000026077) #12 ZNF622 (ENSAMEG00000015369) #13 MARCHF11 (ENSAMEG00000026687) #14 FBXL7 (ENSAMEG00000009793) #15 ANKH (ENSAMEG00000009745) #17 OTULIN (ENSAMEG00000009737) #18 ENSAMEG00000025544 OTULINL (ENSAMEG00000009720) #19 ENSAMEG00000009695 #21 DNAH5 (ENSAMEG00000009669) #22 CTNND2 (ENSAMEG00000013097) #24 DAP (ENSAMEG00000028019) #25 ANKRD33B (ENSAMEG00000025303) #26 ROPN1L (ENSAMEG00000003758) #27 MARCHF6 (ENSAMEG00000003768) #28 CMBL (ENSAMEG00000003820) #29 CCT5 (ENSAMEG00000003838) #30 ATPSCKMT (ENSAMEG00000003866) #31 ENSAMEG00000003878 TAS2R1 (ENSAMEG00000003883) #32 SEMA5A (ENSAMEG00000003884) #33 MTRR (ENSAMEG00000000762) FASTKD3 (ENSAMEG00000000793) ADCY2 (ENSAMEG00000028284) ENSAMEG00000013734 Mustelinae ANCESTRAL SPECIES 149 ENSGT00940000154673.b ENSGT00940000157512 #10 ENSGT00940000159547.d ENSGT00730000111450.j ENSGT00940000155469 #11 ENSGT00940000160746 #12 ENSGT00390000018047 #13 ENSGT00940000160025 #14 ENSGT00940000158009 #15 ENSGT00390000012189 #17 ENSGT00390000009802.b #18 ENSGT00390000009802.a #19 ENSGT00940000154766.a.a #21 ENSGT00940000155533.d #22 ENSGT00940000154426.b.b.y.a.b ENSGT00940000154952.a.b #24 ENSGT00940000154574.c.d #25 ENSGT00500000044852.a #26 ENSGT00390000012731.a.a #27 ENSGT00940000155171.a.b #28 ENSGT00390000000183 #29 ENSGT00550000074988 #30 ENSGT00390000014771.a #31 ENSGT01100000263477.E #32 ENSGT00940000158036 #33 American mink MODERN SPECIES 312 ANKH (ENSNVIG00000010893) #17 OTULIN (ENSNVIG00000010887) #18 OTULINL (ENSNVIG00000010876) #19 TRIO (ENSNVIG00000010801) #21 DNAH5 (ENSNVIG00000010664) #22 Ferret MODERN SPECIES 239 CDH18 (ENSMPUG00000010948) #10 ENSMPUG00000019939 BASP1 (ENSMPUG00000011070) MYO10 (ENSMPUG00000011073) #11 RETREG1 (ENSMPUG00000011093) #12 ZNF622 (ENSMPUG00000011110) #13 ENSMPUG00000011113 MARCHF11 (ENSMPUG00000011114) #14 FBXL7 (ENSMPUG00000011123) #15 ANKH (ENSMPUG00000011126) #17 OTULIN (ENSMPUG00000011131) #18 ENSMPUG00000019940 OTULINL (ENSMPUG00000011140) #19 TRIO (ENSMPUG00000011143) #21 DNAH5 (ENSMPUG00000011161) #22 ENSMPUG00000011188 ENSMPUG00000011198 #24 CTNND2 (ENSMPUG00000011203) #24 ANKRD33B (ENSMPUG00000011211) #26 ENSMPUG00000011222 ROPN1L (ENSMPUG00000011224) #27 MARCHF6 (ENSMPUG00000011228) #28 CMBL (ENSMPUG00000011238) #29 CCT5 (ENSMPUG00000011256) #30 ATPSCKMT (ENSMPUG00000011261) #31 SEMA5A (ENSMPUG00000011293) #33 Canidae ANCESTRAL SPECIES 62 ENSGT00390000009802.b #18 ENSGT00390000009802.a #19 ENSGT00940000166969.b ENSGT00940000154766.a.a #21 ENSGT00940000155533.d #22 ENSGT00940000154952.a.b #24 ENSGT00940000154574.c #25 ENSGT00500000044852.a #26 ENSGT00390000012731.a.a #27 ENSGT00940000155171.a.b #28 ENSGT00390000000183 #29 ENSGT00550000074988 #30 ENSGT00390000014771.a #31 ENSGT01100000263477.E #32 ENSGT00940000158036 #33 ENSGT00940000155822 ENSGT01030000234607.A.a.a.a ENSGT00390000015121 ENSGT00940000156424 ENSGT00940000157811 Canis_lupus ANCESTRAL SPECIES 49 ENSGT00390000009802.b #18 ENSGT00390000009802.a #19 ENSGT00940000166969.b ENSGT00940000154766.a.a #21 ENSGT00940000155533.d #22 ENSGT00940000154952.a.b #24 ENSGT00940000154574.c #25 ENSGT00500000044852.a #26 ENSGT00390000012731.a.a #27 ENSGT00940000155171.a.b #28 ENSGT00390000000183 #29 ENSGT00550000074988 #30 ENSGT00390000014771.a #31 ENSGT00940000153052.c.b.a.a.a.a.b.j.b ENSGT01100000263477.E #32 ENSGT00940000158036 #33 ENSGT00940000155822 ENSGT01030000234607.A.a.a.a ENSGT00390000015121 ENSGT00940000156424 Dingo MODERN SPECIES 159 ENSCAFG00020022335 ENSCAFG00020022336 #18 OTULINL (ENSCAFG00020022340) #19 TRIO (ENSCAFG00020022372) #21 ENSCAFG00020022465 DNAH5 (ENSCAFG00020022467) #22 ENSCAFG00020022470 ENSCAFG00020022471 ENSCAFG00020022472 #24 CTNND2 (ENSCAFG00020022473) #24 DAP (ENSCAFG00020022476) #25 ANKRD33B (ENSCAFG00020022477) #26 ROPN1L (ENSCAFG00020022479) #27 MARCHF6 (ENSCAFG00020022480) #28 ENSCAFG00020022481 ENSCAFG00020022482 ##28 CMBL (ENSCAFG00020022483) #29 CCT5 (ENSCAFG00020022484) #30 ATPSCKMT (ENSCAFG00020022486) #31 ENSCAFG00020022491 TAS2R1 (ENSCAFG00020022493) #32 Dog MODERN SPECIES 27 ENSCAFG00845030917 ENSCAFG00845014823 OTULIN (ENSCAFG00845014835) #18 OTULINL (ENSCAFG00845014899) #19 TRIO (ENSCAFG00845014922) TRIO (ENSCAFG00845014950) #21 ENSCAFG00845015335 #21 DNAH5 (ENSCAFG00845017070) #22 ENSCAFG00845020338 CTNND2 (ENSCAFG00845020488) #24 DAP (ENSCAFG00845021036) #25 ANKRD33B (ENSCAFG00845021111) #26 ROPN1L (ENSCAFG00845021182) #27 MARCHF6 (ENSCAFG00845021339) #28 ENSCAFG00845021651 CMBL (ENSCAFG00845021687) #29 CCT5 (ENSCAFG00845021786) #30 ATPSCKMT (ENSCAFG00845021964) #31 ENSCAFG00845022120 TAS2R1 (ENSCAFG00845022145) #32 SEMA5A (ENSCAFG00845022219) #33 MTRR (ENSCAFG00845022722) FASTKD3 (ENSCAFG00845022802) Red fox MODERN SPECIES 205 OTULIN (ENSVVUG00000006496) #18 OTULINL (ENSVVUG00000006432) #19 ENSVVUG00000006412 ENSVVUG00000006400 TRIO (ENSVVUG00000004613) #21 DNAH5 (ENSVVUG00000003102) #22 Felidae ANCESTRAL SPECIES 6 ENSGT00940000154187.a.b #9 ENSGT00940000157512 #10 ENSGT00940000159547.d ENSGT00730000111450 ENSGT00940000155469 #11 ENSGT00940000160746 #12 ENSGT00390000018047 #13 ENSGT00940000160025 #14 ENSGT00940000158009 #15 ENSGT00390000012189 #17 ENSGT00390000009802.b #18 ENSGT00390000009802.a #19 ENSGT00940000154766.a.a.r #21 ENSGT00940000166969.b ENSGT00940000154766.a.a.q #21 ENSGT00940000155533.d #22 ENSGT00940000154952.a.b #24 ENSGT00940000154574.c #25 ENSGT00500000044852.a #26 ENSGT00390000012731.a.a #27 ENSGT00940000155171.a.b #28 ENSGT00940000155171.a.a ##28 ENSGT00390000000183 #29 ENSGT00550000074988 #30 ENSGT00390000014771.a #31 ENSGT00950000183210.d.a.c.a.a.a ENSGT01100000263477.E #32 ENSGT00940000158036 #33 ENSGT00940000155822 ENSGT01030000234607.A.a.a.a ENSGT00390000015121 Panthera ANCESTRAL SPECIES 6 ENSGT00940000154187.a.a #7 ENSGT00940000154187.a.b #9 ENSGT00940000157512 #10 ENSGT00940000159547.d ENSGT00730000111450 ENSGT00940000155469 #11 ENSGT00940000160746 #12 ENSGT00390000018047 #13 ENSGT00940000160025 #14 ENSGT00940000158009 #15 ENSGT00390000012189 #17 ENSGT00390000009802.b #18 ENSGT00390000009802.a #19 ENSGT00940000166969.b ENSGT00940000154766.a.a.q #21 ENSGT00940000155533.d #22 ENSGT00940000154952.a.b #24 ENSGT00940000154574.c #25 ENSGT00500000044852.a #26 ENSGT00390000012731.a.a #27 ENSGT00940000155171.a.b #28 ENSGT00940000155171.a.a ##28 ENSGT00390000000183 #29 ENSGT00550000074988 #30 ENSGT00390000014771.a #31 ENSGT00950000183210.d.a.c.a.a.a ENSGT01100000263477.E #32 ENSGT00940000158036 #33 ENSGT00940000155822 ENSGT01030000234607.A.a.a.a ENSGT00390000015121 Panthera_a ANCESTRAL SPECIES 3 ENSGT00940000154187.a.b #9 ENSGT00940000157512 #10 ENSGT00940000159547.d ENSGT00730000111450 ENSGT00940000155469 #11 ENSGT00940000160746 #12 ENSGT00390000018047 #13 ENSGT00940000160025 #14 ENSGT00940000158009 #15 ENSGT00390000012189 #17 ENSGT00390000009802.b #18 ENSGT00390000009802.a #19 ENSGT00940000154766.a.a.q #21 ENSGT00940000166969.b ENSGT00940000154766.a.a.r #21 ENSGT00940000155533.d #22 ENSGT00940000154952.a.b #24 ENSGT00940000154574.c #25 ENSGT00500000044852.a #26 ENSGT00390000012731.a.a #27 ENSGT00940000155171.a.b #28 ENSGT00390000000183 #29 ENSGT00550000074988 #30 ENSGT00390000014771.a #31 ENSGT00950000183210.d.a.c.a.a.a ENSGT01100000263477.E #32 ENSGT00940000158036 #33 ENSGT00940000155822 ENSGT01030000234607.A.a.a.a ENSGT00390000015121 ENSGT00940000156424 lion MODERN SPECIES CDH9 (ENSPLOG00000014486) CDH10 (ENSPLOG00000014378) #7 CDH12 (ENSPLOG00000014183) #9 CDH18 (ENSPLOG00000013887) #10 ENSPLOG00000013827 ENSPLOG00000013785 MYO10 (ENSPLOG00000013576) #11 RETREG1 (ENSPLOG00000013464) #12 ZNF622 (ENSPLOG00000013434) #13 MARCHF11 (ENSPLOG00000013400) #14 FBXL7 (ENSPLOG00000013347) #15 ANKH (ENSPLOG00000013310) #17 OTULIN (ENSPLOG00000013270) #18 OTULINL (ENSPLOG00000013236) #19 TRIO (ENSPLOG00000012691) #21 DNAH5 (ENSPLOG00000011942) #22 CTNND2 (ENSPLOG00000011401) #24 ENSPLOG00000011345 #25 ANKRD33B (ENSPLOG00000011323) #26 ROPN1L (ENSPLOG00000011281) #27 MARCHF6 (ENSPLOG00000010780) #28 CMBL (ENSPLOG00000010689) #29 CCT5 (ENSPLOG00000010569) #30 ATPSCKMT (ENSPLOG00000010468) #31 ENSPLOG00000010455 TAS2R1 (ENSPLOG00000010440) #32 SEMA5A (ENSPLOG00000010322) #33 MTRR (ENSPLOG00000010289) FASTKD3 (ENSPLOG00000004196) CFAP90 (ENSPLOG00000004188) ADCY2 (ENSPLOG00000004170) leopard MODERN SPECIES 19 CDH18 (ENSPPRG00000015628) #10 ENSPPRG00000012964 ENSPPRG00000012741 BASP1 (ENSPPRG00000016134) MYO10 (ENSPPRG00000012166) #11 RETREG1 (ENSPPRG00000008874) #12 ENSPPRG00000008393 #13 ENSPPRG00000008274 #13 MARCHF11 (ENSPPRG00000008162) #14 FBXL7 (ENSPPRG00000008025) #15 ANKH (ENSPPRG00000007398) #17 OTULIN (ENSPPRG00000007038) #18 OTULINL (ENSPPRG00000006096) #19 ENSPPRG00000005790 ENSPPRG00000005068 #21 DNAH5 (ENSPPRG00000003569) #22 CTNND2 (ENSPPRG00000000905) #24 DAP (ENSPPRG00000013275) #25 ANKRD33B (ENSPPRG00000013078) #26 ROPN1L (ENSPPRG00000013036) #27 MARCHF6 (ENSPPRG00000012698) #28 CMBL (ENSPPRG00000006791) #29 CCT5 (ENSPPRG00000006386) #30 ATPSCKMT (ENSPPRG00000005698) #31 TAS2R1 (ENSPPRG00000014981) #32 SEMA5A (ENSPPRG00000005014) #33 MTRR (ENSPPRG00000004545) FASTKD3 (ENSPPRG00000004141) CFAP90 (ENSPPRG00000003784) ADCY2 (ENSPPRG00000003380) TENT4A (ENSPPRG00000002409) Tiger MODERN SPECIES 399 CDH18 (ENSPTIG00000010486) #10 ENSPTIG00000008162 ENSPTIG00000010201 MYO10 (ENSPTIG00000009835) #11 RETREG1 (ENSPTIG00000009754) #12 ZNF622 (ENSPTIG00000009603) #13 MARCHF11 (ENSPTIG00000009585) #14 FBXL7 (ENSPTIG00000009515) #15 ENSPTIG00000008154 ANKH (ENSPTIG00000009437) #17 OTULIN (ENSPTIG00000009407) #18 OTULINL (ENSPTIG00000009360) #19 ENSPTIG00000009309 ENSPTIG00000009248 #21 ENSPTIG00000009184 #21 DNAH5 (ENSPTIG00000007989) #22 Cat MODERN SPECIES CDH10 (ENSFCAG00000027287) #7 CDH12 (ENSFCAG00000007961) #9 CDH18 (ENSFCAG00000013641) #10 ENSFCAG00000042777 MYO10 (ENSFCAG00000010325) #11 RETREG1 (ENSFCAG00000041849) #12 ZNF622 (ENSFCAG00000018947) #13 MARCHF11 (ENSFCAG00000005741) #14 FBXL7 (ENSFCAG00000030930) #15 ANKH (ENSFCAG00000012251) #17 OTULIN (ENSFCAG00000006066) #18 OTULINL (ENSFCAG00000026260) #19 ENSFCAG00000052934 #21 ENSFCAG00000043724 ENSFCAG00000046989 #21 DNAH5 (ENSFCAG00000015341) #22 CTNND2 (ENSFCAG00000002522) #24 ENSFCAG00000034118 #25 ANKRD33B (ENSFCAG00000009294) #26 ROPN1L (ENSFCAG00000003135) #27 MARCHF6 (ENSFCAG00000003132) #28 CMBL (ENSFCAG00000028005) #29 CCT5 (ENSFCAG00000003129) #30 ATPSCKMT (ENSFCAG00000027158) #31 ENSFCAG00000048844 TAS2R1 (ENSFCAG00000012611) #32 SEMA5A (ENSFCAG00000012608) #33 MTRR (ENSFCAG00000015105) FASTKD3 (ENSFCAG00000015104) CFAP90 (ENSFCAG00000019341) ADCY2 (ENSFCAG00000015101) Eulipotyphla ANCESTRAL SPECIES ENSGT00940000155533.d #22 Common shrew MODERN SPECIES 1989 DNAH5 (ENSSARG00000000221) #22 Hedgehog MODERN SPECIES 2568 DNAH5 (ENSEEUG00000014663) #22 Atlantogenata ANCESTRAL SPECIES ENSGT00940000154673.a ENSGT00940000160496.b ENSGT00940000154187.a.a #7 ENSGT00940000154187.a.b #9 ENSGT00940000157512 #10 ENSGT00730000111450 ENSGT00940000155469 #11 ENSGT00940000160746 #12 ENSGT00390000018047 #13 ENSGT00940000160025 #14 ENSGT00940000158009 #15 ENSGT00390000012189 #17 ENSGT00390000009802.b #18 ENSGT00390000009802.a #19 ENSGT00940000154766.a.a #21 ENSGT00940000155533.d #22 ENSGT00940000154952.a.b #24 ENSGT00940000154574.c #25 ENSGT00500000044852.a #26 ENSGT00390000012731.a.a #27 ENSGT00940000155171.a.b #28 ENSGT00390000000183 #29 ENSGT00550000074988 #30 ENSGT00390000014771.a #31 ENSGT00940000158036 #33 ENSGT00940000155822 ENSGT01030000234607.A.a.a.a ENSGT00390000015121 ENSGT00940000156424 ENSGT00940000157811 ENSGT00950000182886.b.b Afrotheria ANCESTRAL SPECIES 12 ENSGT00730000111052 ENSGT00940000154673.a ENSGT00940000160496.b ENSGT00940000154187.a.a #7 ENSGT00940000154187.a.b #9 ENSGT00940000157512 #10 ENSGT00940000155469 #11 ENSGT00940000160746 #12 ENSGT00390000018047 #13 ENSGT00940000160025 #14 ENSGT00940000158009 #15 ENSGT00390000012189 #17 ENSGT00390000009802.b #18 ENSGT00390000009802.a #19 ENSGT00940000154766.a.a #21 ENSGT00940000155533.d #22 ENSGT00940000154952.a.b #24 ENSGT00940000154574.c #25 ENSGT00500000044852.a #26 Afrotheria_a ANCESTRAL SPECIES 12 ENSGT00730000111052 ENSGT00940000154673.a ENSGT00940000160496.b ENSGT00940000154187.a.a #7 ENSGT00940000154187.a.b #9 ENSGT00940000157512 #10 ENSGT00940000155469 #11 ENSGT00940000160746 #12 ENSGT00390000018047 #13 ENSGT00940000160025 #14 ENSGT00940000158009 #15 ENSGT00390000012189 #17 ENSGT00390000009802.b #18 ENSGT00390000009802.a #19 ENSGT00940000154766.a.a #21 ENSGT00940000155533.d #22 ENSGT00940000154952.a.b #24 ENSGT00940000154574.c #25 ENSGT00500000044852.a #26 Elephant MODERN SPECIES 526 DROSHA (ENSLAFG00000013831) CDH6 (ENSLAFG00000007375) CDH9 (ENSLAFG00000018440) CDH10 (ENSLAFG00000008284) #7 CDH12 (ENSLAFG00000017027) #9 ENSLAFG00000003845 #10 MYO10 (ENSLAFG00000004123) #11 RETREG1 (ENSLAFG00000018195) #12 ZNF622 (ENSLAFG00000031794) #13 ENSLAFG00000006191 #14 FBXL7 (ENSLAFG00000013099) #15 ANKH (ENSLAFG00000002813) #17 OTULIN (ENSLAFG00000025751) #18 OTULINL (ENSLAFG00000011190) #19 TRIO (ENSLAFG00000007860) #21 DNAH5 (ENSLAFG00000012310) #22 CTNND2 (ENSLAFG00000007728) #24 DAP (ENSLAFG00000011209) #25 ANKRD33B (ENSLAFG00000011206) #26 ENSLAFG00000029202 SLC6A19 (ENSLAFG00000005422) SLC6A18 (ENSLAFG00000006023) TERT (ENSLAFG00000013077) CLPTM1L (ENSLAFG00000012245) SLC6A3 (ENSLAFG00000003040) ENSLAFG00000011431 ENSLAFG00000005707 ENSLAFG00000005708 IRX4 (ENSLAFG00000000460) IRX2 (ENSLAFG00000031893) IRX1 (ENSLAFG00000012017) Hyrax MODERN SPECIES 2133 DNAH5 (ENSPCAG00000014559) #22 Tenrec MODERN SPECIES 2257 DNAH5 (ENSETEG00000017841) #22 Xenarthra ANCESTRAL SPECIES ENSGT00940000155533.d #22 Sloth MODERN SPECIES 2357 DNAH5 (ENSCHOG00000004615) #22 Marsupialia ANCESTRAL SPECIES 1 ENSGT00940000154187.a.a #7 ENSGT00940000154187.a.b #9 ENSGT00940000157512 #10 ENSGT00730000111450 ENSGT00940000155469 #11 ENSGT00940000160746 #12 ENSGT00390000018047 #13 ENSGT00940000160025 #14 ENSGT00940000158009 #15 ENSGT00390000012189 #17 ENSGT00390000009802.b #18 ENSGT00390000009802.a #19 ENSGT00940000154766.a.a.a.a #21 ENSGT00940000166969.b ENSGT00940000154766.a.a.b #21 ENSGT00940000155533.d #22 ENSGT00950000185637 ENSGT00940000154952.a.b #24 ENSGT00940000154574.c #25 ENSGT00500000044852.a #26 ENSGT00390000012731.a.a #27 ENSGT00940000155171.a.b #28 ENSGT00390000000183 #29 ENSGT00550000074988 #30 ENSGT00390000014771.a #31 ENSGT01100000263477.E #32 ENSGT00940000158036 #33 ENSGT00940000155584.db ENSGT00940000155822 ENSGT01030000234607.A.a.a.a ENSGT00390000015121 Marsupialia_b ANCESTRAL SPECIES 2 ENSGT00940000154187.a.a #7 ENSGT00940000154187.a.b #9 ENSGT00940000157512 #10 ENSGT00730000111450 ENSGT00940000155469 #11 ENSGT00940000160746 #12 ENSGT00390000018047 #13 ENSGT00940000160025 #14 ENSGT00940000158009 #15 ENSGT00390000012189 #17 ENSGT00390000009802.b #18 ENSGT00390000009802.a #19 ENSGT00940000154766.a.a.a.a #21 ENSGT00940000166969.b ENSGT00940000154766.a.a.b #21 ENSGT00940000155533.d #22 ENSGT00940000154952.a.b #24 ENSGT00940000154574.c #25 ENSGT00500000044852.a #26 ENSGT00390000012731.a.a #27 ENSGT00940000155171.a.b #28 ENSGT00390000000183 #29 ENSGT00550000074988 #30 ENSGT00390000014771.a #31 ENSGT01100000263477.E #32 ENSGT00940000158036 #33 ENSGT00940000155584.db ENSGT00940000155822 ENSGT01030000234607.A.a.a.a ENSGT00390000015121 ENSGT00940000156424 Diprotodontia ANCESTRAL SPECIES 1 ENSGT00940000154673.a ENSGT00940000160496.b ENSGT00940000154187.a.a #7 ENSGT00940000154187.a.b #9 ENSGT00730000111450 ENSGT00940000155469 #11 ENSGT00940000160746 #12 ENSGT00390000018047 #13 ENSGT00940000160025 #14 ENSGT00940000158009 #15 ENSGT00390000012189 #17 ENSGT00390000009802.b #18 ENSGT00390000009802.a #19 ENSGT00940000166969.b ENSGT00940000154766.a.a.b #21 ENSGT00940000155533.d #22 ENSGT00940000154952.a.b #24 ENSGT00940000154574.c #25 ENSGT00500000044852.a #26 ENSGT00390000012731.a.a #27 ENSGT00940000155171.a.b #28 ENSGT00390000000183 #29 ENSGT00550000074988 #30 ENSGT00390000014771.a #31 ENSGT01100000263477.E #32 ENSGT00940000158036 #33 ENSGT00940000155822 ENSGT01030000234607.A.a.a.a ENSGT00390000015121 ENSGT00940000156424 ENSGT00940000157811 Diprotodontia_a ANCESTRAL SPECIES ENSGT00390000009405.e.a.b ENSGT00940000160496.b ENSGT00940000154187.a.a #7 ENSGT00940000154187.a.b #9 ENSGT00730000111450.b ENSGT00940000155469 #11 ENSGT00940000160746 #12 ENSGT00390000018047 #13 ENSGT00940000160025 #14 ENSGT00940000158009 #15 ENSGT00390000012189 #17 ENSGT00390000009802.b #18 ENSGT00390000009802.a #19 ENSGT00940000166969.b ENSGT00940000154766.a.a.b #21 ENSGT00940000155533.d #22 ENSGT00940000154952.a.b #24 ENSGT00940000154574.c #25 ENSGT00500000044852.a #26 ENSGT00390000012731.a.a #27 ENSGT00940000155171.a.b #28 ENSGT00390000000183 #29 ENSGT00550000074988 #30 ENSGT00390000014771.a #31 ENSGT01100000263477.E #32 ENSGT00940000158036 #33 ENSGT00940000155822 ENSGT01030000234607.A.a.a.a ENSGT00390000015121 ENSGT00940000156424 ENSGT00940000157811 Common wonbat MODERN SPECIES 1028 CDH18 (ENSVURG00010021029) #10 ENSVURG00010021059 ENSVURG00010021063 ENSVURG00010021066 ENSVURG00010021069 MYO10 (ENSVURG00010021079) #11 RETREG1 (ENSVURG00010021092) #12 ZNF622 (ENSVURG00010021097) #13 MARCHF11 (ENSVURG00010021104) #14 FBXL7 (ENSVURG00010021107) #15 ENSVURG00010021114 ANKH (ENSVURG00010021123) #17 OTULIN (ENSVURG00010021135) #18 OTULINL (ENSVURG00010021137) #19 TRIO (ENSVURG00010021149) #21 DNAH5 (ENSVURG00010021185) #22 ENSVURG00010021225 ENSVURG00010021228 ENSVURG00010021256 ENSVURG00010021260 ENSVURG00010021266 #24 DAP (ENSVURG00010021276) #25 ANKRD33B (ENSVURG00010021286) #26 ROPN1L (ENSVURG00010021288) #27 MARCHF6 (ENSVURG00010021297) #28 CMBL (ENSVURG00010021313) #29 CCT5 (ENSVURG00010021320) #30 ATPSCKMT (ENSVURG00010021339) #31 ENSVURG00010021349 #32 ENSVURG00010021351 #32 SEMA5A (ENSVURG00010021360) #33 koala MODERN SPECIES 131 ENSPCIG00000006733 ENSPCIG00000027069 ENSPCIG00000027066 MYO10 (ENSPCIG00000027061) #11 RETREG1 (ENSPCIG00000025061) #12 ZNF622 (ENSPCIG00000025058) #13 MARCHF11 (ENSPCIG00000003964) #14 FBXL7 (ENSPCIG00000004033) #15 ENSPCIG00000024000 ANKH (ENSPCIG00000024004) #17 OTULIN (ENSPCIG00000014035) #18 OTULINL (ENSPCIG00000014039) #19 ENSPCIG00000031853 ENSPCIG00000014044 #21 ENSPCIG00000002846 #21 DNAH5 (ENSPCIG00000024266) #22 ENSPCIG00000026022 ENSPCIG00000026023 Wallaby MODERN SPECIES 3626 DNAH5 (ENSMEUG00000013897) #22 Tasmanian devil MODERN SPECIES ENSSHAG00000032124 ENSSHAG00000027970 CDH18 (ENSSHAG00000007404) #10 ENSSHAG00000025423 BASP1 (ENSSHAG00000024924) ENSSHAG00000007802 RETREG1 (ENSSHAG00000005315) #12 ZNF622 (ENSSHAG00000004315) #13 MARCHF11 (ENSSHAG00000025647) #14 FBXL7 (ENSSHAG00000010989) #15 ANKH (ENSSHAG00000011934) #17 OTULIN (ENSSHAG00000011460) #18 OTULINL (ENSSHAG00000011137) #19 ENSSHAG00000008840 #21 ENSSHAG00000032390 #21 DNAH5 (ENSSHAG00000006224) #22 ENSSHAG00000020832 CTNND2 (ENSSHAG00000026816) #24 DAP (ENSSHAG00000029014) #25 ANKRD33B (ENSSHAG00000025830) #26 MARCHF6 (ENSSHAG00000000452) #28 ENSSHAG00000030222 ENSSHAG00000029153 ##28 CMBL (ENSSHAG00000027779) #29 ENSSHAG00000025425 #30 ATPSCKMT (ENSSHAG00000031295) #31 ENSSHAG00000030169 #32 SEMA5A (ENSSHAG00000025721) #33 ENSSHAG00000004959 MTRR (ENSSHAG00000006711) FASTKD3 (ENSSHAG00000006423) Opossum MODERN SPECIES 2 ENSMODG00000003590 ENSMODG00000003560 MYO10 (ENSMODG00000003552) #11 RETREG1 (ENSMODG00000038378) #12 ZNF622 (ENSMODG00000003459) #13 ENSMODG00000037624 MARCHF11 (ENSMODG00000003445) #14 FBXL7 (ENSMODG00000003438) #15 ENSMODG00000029539 ENSMODG00000036561 ANKH (ENSMODG00000002970) #17 OTULIN (ENSMODG00000002941) #18 OTULINL (ENSMODG00000002927) #19 ENSMODG00000039565 #21 ENSMODG00000002909 #21 DNAH5 (ENSMODG00000002817) #22 ENSMODG00000049658 ENSMODG00000017321 ENSMODG00000036425 CTNND2 (ENSMODG00000002489) #24 ENSMODG00000045468 ENSMODG00000002471 ENSMODG00000025607 #25 ANKRD33B (ENSMODG00000002457) #26 ROPN1L (ENSMODG00000002454) #27 MARCHF6 (ENSMODG00000002440) #28 CMBL (ENSMODG00000002371) #29 CCT5 (ENSMODG00000002356) #30 ATPSCKMT (ENSMODG00000002341) #31 ENSMODG00000002337 ENSMODG00000045390 Platypus MODERN SPECIES 86 CDH6 (ENSOANG00000015746) CDH9 (ENSOANG00000002505) CDH10 (ENSOANG00000002504) #7 CDH12 (ENSOANG00000002500) #9 CDH18 (ENSOANG00000002498) #10 BASP1 (ENSOANG00000041988) MYO10 (ENSOANG00000009146) #11 RETREG1 (ENSOANG00000009147) #12 ZNF622 (ENSOANG00000021071) #13 MARCHF11 (ENSOANG00000009145) #14 FBXL7 (ENSOANG00000036368) #15 ANKH (ENSOANG00000011616) #17 OTULIN (ENSOANG00000011614) #18 OTULINL (ENSOANG00000011613) #19 TRIO (ENSOANG00000011610) #21 DNAH5 (ENSOANG00000011603) #22 CTNND2 (ENSOANG00000011600) #24 DAP (ENSOANG00000011599) #25 ENSOANG00000011598 #26 ROPN1L (ENSOANG00000011597) #27 MARCHF6 (ENSOANG00000011595) #28 CMBL (ENSOANG00000011594) #29 CCT5 (ENSOANG00000011592) #30 ATPSCKMT (ENSOANG00000011590) #31 SEMA5A (ENSOANG00000011586) #33 MTRR (ENSOANG00000011583) C5orf49 (ENSOANG00000036348) ADCY2 (ENSOANG00000011580) TENT4A (ENSOANG00000011579) SRD5A1 (ENSOANG00000041870) NSUN2 (ENSOANG00000009243) Sauria ANCESTRAL SPECIES ENSGT00940000154673.b ENSGT00940000154187.a.b #9 ENSGT00940000157512 #10 ENSGT00730000111450 ENSGT00940000155469 #11 ENSGT00940000160746 #12 ENSGT00390000018047 #13 ENSGT00940000160025 #14 ENSGT00940000158009 #15 ENSGT00390000012189 #17 ENSGT01090000260321 ENSGT00390000009802.b #18 ENSGT00390000009802.a #19 ENSGT00940000166969.b ENSGT00940000154766.a.a #21 ENSGT00940000155533.d #22 ENSGT00940000154952.a.b #24 ENSGT00940000154574.c #25 ENSGT00500000044852.a #26 ENSGT00390000004886 ENSGT00390000012731.a.a #27 ENSGT00940000155171.a.b #28 ENSGT00940000155171.a.a ##28 ENSGT00390000000183.g.b #29 ENSGT00390000000183.g.a #29 ENSGT00550000074988 #30 ENSGT00390000014771.a #31 ENSGT01030000235349 ENSGT00940000158036 #33 ENSGT00940000155822 ENSGT01030000234607.A.a.a.a Archelosauria ANCESTRAL SPECIES 5 ENSGT00940000154187.a.a #7 ENSGT00940000154187.a.b #9 ENSGT00940000157512 #10 ENSGT00730000111450 ENSGT00940000155469 #11 ENSGT00940000160746 #12 ENSGT00390000018047 #13 ENSGT00940000160025 #14 ENSGT00940000158009 #15 ENSGT00390000012189 #17 ENSGT01090000260321 ENSGT00390000009802.b #18 ENSGT00390000009802.a #19 ENSGT00940000166969.b ENSGT00940000154766.a.a #21 ENSGT00940000155533.d #22 ENSGT00940000154952.a.b #24 ENSGT00940000154574.c #25 ENSGT00500000044852.a #26 ENSGT00390000004886 ENSGT00390000012731.a.a #27 ENSGT00940000155171.a.b #28 ENSGT00940000155171.a.a ##28 ENSGT00390000000183.g.b #29 ENSGT00390000000183.g.a #29 ENSGT00940000161663 ENSGT00550000074988 #30 ENSGT00390000014771.a #31 ENSGT00940000158036 #33 ENSGT00940000155822 ENSGT01030000234607.A.a.a.a Archosauria ANCESTRAL SPECIES ENSGT00940000154187.a.a #7 ENSGT00940000154187.a.b #9 ENSGT00940000157512 #10 ENSGT00730000111450 ENSGT00940000155469 #11 ENSGT00940000160746 #12 ENSGT00390000018047 #13 ENSGT00940000160025 #14 ENSGT00940000158009 #15 ENSGT00390000012189 #17 ENSGT01090000260321 ENSGT00390000009802.b #18 ENSGT00390000009802.a #19 ENSGT00940000166969.b ENSGT00940000154766.a.a #21 ENSGT00940000155533.d #22 ENSGT00940000154952.a.b #24 ENSGT00940000154574.c #25 ENSGT00500000044852.a #26 ENSGT00390000004886 ENSGT00390000012731.a.a #27 ENSGT00940000155171.a.b #28 ENSGT00940000155171.a.a ##28 ENSGT00390000000183.g.b #29 ENSGT00390000000183.g.a #29 ENSGT00940000161663 ENSGT00550000074988 #30 ENSGT00390000014771.a #31 ENSGT00940000158036 #33 ENSGT00940000155822 ENSGT01030000234607.A.a.a.a Aves ANCESTRAL SPECIES 24 ENSGT00940000154187.a.a #7 ENSGT00940000154187.a.b #9 ENSGT00940000157512 #10 ENSGT00730000111450 ENSGT00940000155469 #11 ENSGT00940000160746 #12 ENSGT00390000018047 #13 ENSGT00940000160025 #14 ENSGT00940000158009 #15 ENSGT00390000012189 #17 ENSGT01090000260321 ENSGT00390000009802.b #18 ENSGT00390000009802.a #19 ENSGT00940000166969.b ENSGT00940000154766.a.a #21 ENSGT00940000155533.d #22 ENSGT00940000154952.a.b #24 ENSGT00940000154574.c #25 ENSGT00500000044852.a #26 ENSGT00390000004886 ENSGT00390000012731.a.a #27 ENSGT00940000155171.a.b #28 ENSGT00940000155171.a.a ##28 ENSGT00390000000183.g.b #29 ENSGT00390000000183.g.a #29 ENSGT00940000161663 ENSGT00550000074988 #30 ENSGT00390000014771.a #31 ENSGT00940000158036 #33 ENSGT00940000155822 ENSGT01030000234607.A.a.a.a Neognathae ANCESTRAL SPECIES ENSGT00940000154187.a.a #7 ENSGT00940000154187.a.b #9 ENSGT00940000157512 #10 ENSGT00730000111450 ENSGT00940000155469 #11 ENSGT00940000160746 #12 ENSGT00390000018047 #13 ENSGT00940000160025 #14 ENSGT00940000158009 #15 ENSGT00390000012189 #17 ENSGT01090000260321 ENSGT00390000009802.b #18 ENSGT00390000009802.a #19 ENSGT00940000166969.b ENSGT00940000154766.a.a #21 ENSGT00940000155533.d #22 ENSGT00940000154952.a.b #24 ENSGT00940000154574.c #25 ENSGT00500000044852.a #26 ENSGT00390000004886 ENSGT00390000012731.a.a #27 ENSGT00940000155171.a.b #28 ENSGT00940000155171.a.a ##28 ENSGT00390000000183.g.b #29 ENSGT00390000000183.g.a #29 ENSGT00940000161663 ENSGT00550000074988 #30 ENSGT00390000014771.a #31 ENSGT00940000158036 #33 ENSGT00940000155822 ENSGT01030000234607.A.a.a.a Galloanserae ANCESTRAL SPECIES ENSGT00940000160496.b ENSGT00940000154187.a.a #7 ENSGT00940000154187.a.b #9 ENSGT00940000157512 #10 ENSGT00730000111450 ENSGT00940000155469 #11 ENSGT00940000160746 #12 ENSGT00390000018047 #13 ENSGT00940000160025 #14 ENSGT00940000158009 #15 ENSGT00390000012189 #17 ENSGT00390000009802.b #18 ENSGT00390000009802.a #19 ENSGT00940000166969.b ENSGT00940000154766.a.a #21 ENSGT00940000155533.d #22 ENSGT00940000154952.a.b #24 ENSGT00940000154574.c #25 ENSGT00500000044852.a #26 ENSGT00390000004886 ENSGT00390000012731.a.a #27 ENSGT00940000155171.a.b #28 ENSGT00940000155171.a.a ##28 ENSGT00390000000183.g.b #29 ENSGT00390000000183.g.a.a #29 ENSGT00940000161663 ENSGT00550000074988 #30 ENSGT00390000014771.a #31 ENSGT00940000158036 #33 ENSGT00940000155822 ENSGT01030000234607.A.a.a.a Anatidae ANCESTRAL SPECIES 3 ENSGT00940000163866.b ENSGT00390000010872 ENSGT00940000159059 ENSGT00940000157153 ENSGT00940000156563 ENSGT00940000159347 ENSGT00390000004746 ENSGT00940000154150 ENSGT00390000011804 ENSGT00940000157354 ENSGT00390000009209.d ENSGT00940000155562 ENSGT00390000009802.a #19 ENSGT00940000166969.b ENSGT00940000154766.a.a #21 ENSGT00940000155533.d #22 ENSGT00940000154952.a.b #24 ENSGT00940000154574.c #25 ENSGT00500000044852.a #26 ENSGT00390000004886 ENSGT00390000012731.a.a #27 ENSGT00940000155171.a.b #28 ENSGT00940000155171.a.a ##28 ENSGT00390000000183.g.b #29 ENSGT00390000000183.g.a.b #29 ENSGT00390000000183.g.a.a #29 ENSGT00940000161663 ENSGT00550000074988 #30 ENSGT00390000014771.a #31 ENSGT00940000158036 #33 ENSGT00940000155822 Duck DUPLICATION Duck MODERN SPECIES 10 ENSAPLG00000017427 EXOC2 (ENSAPLG00000013910) IRF4 (ENSAPLG00000014646) DUSP22 (ENSAPLG00000015108) NQO2 (ENSAPLG00000015289) RIPK1 (ENSAPLG00000015420) BPHL (ENSAPLG00000015545) TUBB2A (ENSAPLG00000027345) PSMG4 (ENSAPLG00000023970) SLC22A23 (ENSAPLG00000015771) ENSAPLG00000013227 PRPF4B (ENSAPLG00000009869) OTULINL (ENSAPLG00000009753) #19 ENSAPLG00000017143 TRIO (ENSAPLG00000008508) #21 ENSAPLG00000018807 #22 ENSAPLG00000026164 #22 ENSAPLG00000022935 ENSAPLG00000026688 ENSAPLG00000028170 #24 ENSAPLG00000016359 #24 DAP (ENSAPLG00000021887) #25 ANKRD33B (ENSAPLG00000016329) #26 SNRNP48 (ENSAPLG00000016279) ROPN1L (ENSAPLG00000016260) #27 MARCHF6 (ENSAPLG00000013193) #28 ENSAPLG00000023780 ##28 ENSAPLG00000013173 #29 CCT5 (ENSAPLG00000012960) #30 ENSAPLG00000021678 #29 ENSAPLG00000013115 #29 Duck MODERN SPECIES 10 EXOC2 (ENSAPLG00000013910) IRF4 (ENSAPLG00000014646) DUSP22 (ENSAPLG00000015108) NQO2 (ENSAPLG00000015289) RIPK1 (ENSAPLG00000015420) BPHL (ENSAPLG00000015545) TUBB2A (ENSAPLG00000027345) PSMG4 (ENSAPLG00000023970) SLC22A23 (ENSAPLG00000015771) ENSAPLG00000013227 PRPF4B (ENSAPLG00000009869) OTULINL (ENSAPLG00000009753) #19 ENSAPLG00000017143 TRIO (ENSAPLG00000008508) #21 ENSAPLG00000018807 #22 ENSAPLG00000026164 #22 ENSAPLG00000022935 ENSAPLG00000026688 ENSAPLG00000028170 #24 ENSAPLG00000016359 #24 DAP (ENSAPLG00000021887) #25 ANKRD33B (ENSAPLG00000016329) #26 SNRNP48 (ENSAPLG00000016279) ROPN1L (ENSAPLG00000016260) #27 MARCHF6 (ENSAPLG00000013193) #28 ENSAPLG00000023780 ##28 ENSAPLG00000013173 #29 CCT5 (ENSAPLG00000012960) #30 ENSAPLG00000021678 #29 ENSAPLG00000013115 #29 SBK2 (ENSAPLG00000021365) Pink-footed goose MODERN SPECIES 55 EXOC2 (ENSABRG00000011820) IRF4 (ENSABRG00000011809) NQO2 (ENSABRG00000011803) RIPK1 (ENSABRG00000011788) DUSP22 (ENSABRG00000011775) BPHL (ENSABRG00000011769) ENSABRG00000011768 ENSABRG00000011765 ENSABRG00000011762 PSMG4 (ENSABRG00000011758) SLC22A23 (ENSABRG00000011756) PXDC1 (ENSABRG00000011748) PRPF4B (ENSABRG00000011735) OTULINL (ENSABRG00000011720) #19 TRIO (ENSABRG00000005891) #21 DNAH5 (ENSABRG00000004814) #22 Phasianidae ANCESTRAL SPECIES 1 ENSGT00940000154673.a ENSGT00940000160496.b ENSGT00940000154187.a.a #7 ENSGT00940000154187.a.b #9 ENSGT00940000157512 #10 ENSGT00730000111450 ENSGT00940000155469 #11 ENSGT00940000160746 #12 ENSGT00390000018047 #13 ENSGT00940000160025 #14 ENSGT00940000158009 #15 ENSGT00390000012189 #17 ENSGT00390000009802.b #18 ENSGT00390000009802.a #19 ENSGT00940000154766.a.a #21 ENSGT00940000155533.d #22 ENSGT00940000154952.a.b #24 ENSGT00940000154574.c #25 ENSGT00500000044852.a #26 ENSGT00390000004886 ENSGT00390000012731.a.a #27 ENSGT00940000155171.a.b #28 ENSGT00390000000183.g.b #29 ENSGT00390000000183.g.a.a #29 ENSGT00940000161663 ENSGT00550000074988 #30 ENSGT00390000014771.a #31 ENSGT00940000158036 #33 ENSGT00940000155822 ENSGT01030000234607.A.a.a.a ENSGT00390000015121 Phasianidae_b ANCESTRAL SPECIES 1 ENSGT00940000154673.a ENSGT00940000160496.b ENSGT00940000154187.a.a #7 ENSGT00940000154673.b ENSGT00940000157512 #10 ENSGT00730000111450 ENSGT00940000155469 #11 ENSGT00940000160746 #12 ENSGT00390000018047 #13 ENSGT00940000160025 #14 ENSGT00940000158009 #15 ENSGT00390000012189 #17 ENSGT00390000009802.b #18 ENSGT00390000009802.a #19 ENSGT00940000154766.a.a #21 ENSGT00940000155533.d #22 ENSGT00940000154952.a.b #24 ENSGT00940000154574.c #25 ENSGT00500000044852.a #26 ENSGT00390000004886 ENSGT00390000012731.a.a #27 ENSGT00940000155171.a.b #28 ENSGT00390000000183.g.b #29 ENSGT00390000000183.g.a.a #29 ENSGT00940000161663 ENSGT00550000074988 #30 ENSGT00390000014771.a #31 ENSGT00940000158036 #33 ENSGT00940000155822 ENSGT01030000234607.A.a.a.a ENSGT00390000015121 Chicken MODERN SPECIES 11 ENSGALG00010000594 CDH10 (ENSGALG00010000760) #7 ENSGALG00010000768 CDH12 (ENSGALG00010000770) CDH18 (ENSGALG00010000814) #10 BASP1 (ENSGALG00010000822) MYO10 (ENSGALG00010000595) #11 RETREG1 (ENSGALG00010000599) #12 ZNF622 (ENSGALG00010000603) #13 MARCHF11 (ENSGALG00010000605) #14 FBXL7 (ENSGALG00010000714) #15 ANKH (ENSGALG00010000722) #17 OTULIN (ENSGALG00010000728) #18 FAM105A (ENSGALG00010000741) #19 TRIO (ENSGALG00010000753) #21 DNAH5 (ENSGALG00010000590) #22 ENSGALG00010000798 #24 ENSGALG00010000799 #24 DAP (ENSGALG00010000783) #25 ANKRD33B (ENSGALG00010000786) #26 SNRNP48 (ENSGALG00010000787) ROPN1L (ENSGALG00010000789) #27 MARCH6 (ENSGALG00010000790) #28 ENSGALG00010000792 #29 ENSGALG00010000794 ENSGALG00010000797 #29 SBK2 (ENSGALG00010000591) CCT5 (ENSGALG00010000592) #30 ATPSCKMT (ENSGALG00010000593) #31 SEMA5A (ENSGALG00010000802) #33 MTRR (ENSGALG00010000803) Turkey MODERN SPECIES 22 MBOAT1 (ENSMGAG00000002523) ENSMGAG00000018910 CDH18 (ENSMGAG00000005465) #10 ENSMGAG00000017283 ENSMGAG00000005603 BASP1 (ENSMGAG00000015420) MYO10 (ENSMGAG00000005628) #11 RETREG1 (ENSMGAG00000005703) #12 ZNF622 (ENSMGAG00000005719) #13 MARCHF11 (ENSMGAG00000005750) #14 FBXL7 (ENSMGAG00000005758) #15 ANKH (ENSMGAG00000005791) #17 OTULIN (ENSMGAG00000005837) #18 OTULINL (ENSMGAG00000005845) #19 TRIO (ENSMGAG00000005861) #21 DNAH5 (ENSMGAG00000005882) #22 CTNND2 (ENSMGAG00000017240) #24 DAP (ENSMGAG00000006012) #25 ANKRD33B (ENSMGAG00000006014) #26 ENSMGAG00000006037 ROPN1L (ENSMGAG00000006020) #27 MARCHF6 (ENSMGAG00000006048) #28 ENSMGAG00000019350 #29 ENSMGAG00000006110 #29 ENSMGAG00000006120 CCT5 (ENSMGAG00000006124) #30 ATPSCKMT (ENSMGAG00000006177) #31 SEMA5A (ENSMGAG00000006186) #33 MTRR (ENSMGAG00000006215) FASTKD3 (ENSMGAG00000006250) ENSMGAG00000022121 Japanese quail MODERN SPECIES 11 CDH10 (ENSCJPG00005015544) #7 CDH12 (ENSCJPG00005015536) #9 CDH18 (ENSCJPG00005015532) #10 BASP1 (ENSCJPG00005015520) MYO10 (ENSCJPG00005015519) #11 RETREG1 (ENSCJPG00005015518) #12 ZNF622 (ENSCJPG00005015517) #13 MARCHF11 (ENSCJPG00005015515) #14 FBXL7 (ENSCJPG00005015513) #15 ENSCJPG00005015511 OTULIN (ENSCJPG00005015510) #18 OTULINL (ENSCJPG00005015509) #19 ENSCJPG00005015491 #21 ANKH (ENSCJPG00005015490) #17 ENSCJPG00005014953 #21 DNAH5 (ENSCJPG00005014950) #22 CTNND2 (ENSCJPG00005014946) #24 DAP (ENSCJPG00005014944) #25 ANKRD33B (ENSCJPG00005014943) #26 SNRNP48 (ENSCJPG00005014942) ROPN1L (ENSCJPG00005014941) #27 MARCHF6 (ENSCJPG00005014940) #28 ENSCJPG00005014923 #29 ENSCJPG00005014922 #29 SBK2 (ENSCJPG00005014921) CCT5 (ENSCJPG00005014920) #30 ATPSCKMT (ENSCJPG00005014919) #31 SEMA5A (ENSCJPG00005014915) #33 MTRR (ENSCJPG00005014912) FASTKD3 (ENSCJPG00005014911) CFAP90 (ENSCJPG00005014910) Neognathae_b ANCESTRAL SPECIES 3 ENSGT00940000160496.b ENSGT00940000154187.a.a #7 ENSGT00940000154187.a.b #9 ENSGT00940000157512 #10 ENSGT00730000111450 ENSGT00940000155469 #11 ENSGT00940000160746 #12 ENSGT00390000018047 #13 ENSGT00940000160025 #14 ENSGT00940000158009 #15 ENSGT00390000012189 #17 ENSGT01090000260321 ENSGT00390000009802.b #18 ENSGT00390000009802.a #19 ENSGT00940000154766.a.a #21 ENSGT00940000155533.d #22 ENSGT00940000154952.a.b #24 ENSGT00940000154574.c #25 ENSGT00500000044852.a #26 ENSGT00390000004886 ENSGT00390000012731.a.a #27 ENSGT00940000155171.a.b #28 ENSGT00390000000183.g.b #29 ENSGT00390000000183.g.a #29 ENSGT00940000161663 ENSGT00550000074988 #30 ENSGT00390000014771.a #31 ENSGT00940000158036 #33 ENSGT00940000155822 ENSGT01030000234607.A.a.a.a ENSGT00390000015121 Neognathae_c ANCESTRAL SPECIES 1 ENSGT00940000160496.b ENSGT00940000154187.a.a #7 ENSGT00940000154187.a.b #9 ENSGT00940000157512 #10 ENSGT00730000111450 ENSGT00940000155469 #11 ENSGT00940000160746 #12 ENSGT00390000018047 #13 ENSGT00940000160025 #14 ENSGT00940000158009 #15 ENSGT00390000012189 #17 ENSGT01090000260321 ENSGT00390000009802.b #18 ENSGT00390000009802.a #19 ENSGT00940000154766.a.a #21 ENSGT00940000155533.d #22 ENSGT00940000154952.a.b #24 ENSGT00940000154574.c #25 ENSGT00500000044852.a #26 ENSGT00390000004886 ENSGT00390000012731.a.a #27 ENSGT00940000155171.a.b #28 ENSGT00390000000183.g.b #29 ENSGT00390000000183.g.a #29 ENSGT00940000161663 ENSGT00550000074988 #30 ENSGT00390000014771.a #31 ENSGT00940000158036 #33 ENSGT00940000155822 ENSGT01030000234607.A.a.a.a ENSGT00390000015121 Kakapo MODERN SPECIES CDH9 (ENSSHBG00005014849) ENSSHBG00005014843 CDH10 (ENSSHBG00005014826) #7 CDH12 (ENSSHBG00005014815) #9 CDH18 (ENSSHBG00005014801) #10 BASP1 (ENSSHBG00005014787) MYO10 (ENSSHBG00005014633) #11 RETREG1 (ENSSHBG00005014529) #12 ZNF622 (ENSSHBG00005014514) #13 MARCHF11 (ENSSHBG00005014500) #14 FBXL7 (ENSSHBG00005014489) #15 ANKH (ENSSHBG00005014471) #17 OTULIN (ENSSHBG00005014451) #18 OTULINL (ENSSHBG00005014443) #19 TRIO (ENSSHBG00005009169) #21 DNAH5 (ENSSHBG00005008454) #22 NETO1 (ENSSHBG00005008375) CBLN2 (ENSSHBG00005008367) SOCS6 (ENSSHBG00005008363) ENSSHBG00005008344 ENSSHBG00005008316 ENSSHBG00005008294 DOK6 (ENSSHBG00005008281) ENSSHBG00005008264 TMX3 (ENSSHBG00005008246) ENSSHBG00005008208 DSEL (ENSSHBG00005008200) CDH19 (ENSSHBG00005008120) CDH7 (ENSSHBG00005008095) MC2R (ENSSHBG00005008079) MC5R (ENSSHBG00005008066) Golden eagle MODERN SPECIES 9 CDH10 (ENSACCG00020014718) #7 ENSACCG00020014702 ENSACCG00020014679 CDH18 (ENSACCG00020014660) #10 BASP1 (ENSACCG00020014643) ENSACCG00020014615 RETREG1 (ENSACCG00020014595) #12 ZNF622 (ENSACCG00020014572) #13 MARCHF11 (ENSACCG00020014555) #14 FBXL7 (ENSACCG00020014543) #15 ANKH (ENSACCG00020014517) #17 ENSACCG00020014505 OTULIN (ENSACCG00020014488) #18 OTULINL (ENSACCG00020014470) #19 TRIO (ENSACCG00020014021) #21 ENSACCG00020013332 #22 ENSACCG00020013316 #24 ENSACCG00020013278 #24 DAP (ENSACCG00020013235) #25 ENSACCG00020013213 #26 ENSACCG00020013193 #26 SNRNP48 (ENSACCG00020013167) ROPN1L (ENSACCG00020013137) #27 MARCHF6 (ENSACCG00020013077) #28 ENSACCG00020013004 #29 ENSACCG00020012974 #29 SBK2 (ENSACCG00020012949) CCT5 (ENSACCG00020012935) #30 ATPSCKMT (ENSACCG00020012908) #31 SEMA5A (ENSACCG00020012852) #33 MTRR (ENSACCG00020012805) Passeriformes ANCESTRAL SPECIES ENSGT00940000160496.b ENSGT00940000154187.a.a #7 ENSGT00940000154187.a.b #9 ENSGT00940000157512 #10 ENSGT00730000111450 ENSGT00940000155469 #11 ENSGT00940000160746 #12 ENSGT00390000018047 #13 ENSGT00940000160025 #14 ENSGT00940000158009 #15 ENSGT00390000012189 #17 ENSGT01090000260321 ENSGT00390000009802.b #18 ENSGT00390000009802.a #19 ENSGT00940000154766.a.a #21 ENSGT00940000155533.d #22 ENSGT00940000154952.a.b #24 ENSGT00940000154574.c #25 ENSGT00500000044852.a #26 ENSGT00390000004886 ENSGT00390000012731.a.a #27 ENSGT00940000155171.a.b #28 ENSGT00390000000183.g.b #29 ENSGT00390000000183.g.a #29 ENSGT00940000161663 ENSGT00550000074988 #30 ENSGT00390000014771.a #31 ENSGT00940000158036 #33 ENSGT00940000155822 ENSGT01030000234607.A.a.a.a ENSGT00390000015121 Passeriformes_d ANCESTRAL SPECIES ENSGT00940000160496.b ENSGT00940000154187.a.a #7 ENSGT00940000154187.a.b #9 ENSGT00940000157512 #10 ENSGT00730000111450 ENSGT00940000155469 #11 ENSGT00940000160746 #12 ENSGT00390000018047 #13 ENSGT00940000160025 #14 ENSGT00940000158009 #15 ENSGT00390000012189 #17 ENSGT01090000260321 ENSGT00390000009802.b #18 ENSGT00390000009802.a #19 ENSGT00940000154766.a.a #21 ENSGT00940000155533.d #22 ENSGT00940000154952.a.b #24 ENSGT00940000154574.c #25 ENSGT00500000044852.a #26 ENSGT00390000004886 ENSGT00390000012731.a.a #27 ENSGT00940000155171.a.b #28 ENSGT00390000000183.g.b #29 ENSGT00390000000183.g.a #29 ENSGT00940000161663 ENSGT00550000074988 #30 ENSGT00390000014771.a #31 ENSGT00940000158036 #33 ENSGT00940000155822 ENSGT01030000234607.A.a.a.a ENSGT00390000015121 Passeriformes_g DUPLICATION Passeriformes_g ANCESTRAL SPECIES 3 ENSGT00940000154673.a ENSGT00940000160496.b ENSGT00940000154187.a.a #7 ENSGT00940000154187.a.b #9 ENSGT00940000157512 #10 ENSGT00730000111450 ENSGT00940000155469 #11 ENSGT00940000160746 #12 ENSGT00390000018047 #13 ENSGT00940000160025 #14 ENSGT00940000158009 #15 ENSGT00390000012189 #17 ENSGT00390000009802.b #18 ENSGT00390000009802.a #19 ENSGT00940000154766.a.a #21 ENSGT00940000155533.d.c #22 ENSGT00940000154952.a.b #24 ENSGT00940000154574.c #25 ENSGT00500000044852.a #26 ENSGT00390000004886 ENSGT00390000012731.a.a #27 ENSGT00940000155171.a.b #28 ENSGT00390000000183.g.b #29 ENSGT00390000000183.g.a #29 ENSGT00940000161663 ENSGT00550000074988 #30 ENSGT00390000014771.a #31 ENSGT00940000158036 #33 ENSGT00940000155822 ENSGT01030000234607.A.a.a.a ENSGT00390000015121 Passeroidea ANCESTRAL SPECIES 2 ENSGT00940000154673.a ENSGT00940000160496.b ENSGT00940000154187.a.a #7 ENSGT00940000154187.a.b #9 ENSGT00940000157512 #10 ENSGT00730000111450 ENSGT00940000155469 #11 ENSGT00940000160746 #12 ENSGT00390000018047 #13 ENSGT00940000160025 #14 ENSGT00940000158009 #15 ENSGT00390000012189 #17 ENSGT00390000009802.b #18 ENSGT00390000009802.a #19 ENSGT00940000154766.a.a #21 ENSGT00940000155533.d.c #22 ENSGT00940000154952.a.b #24 ENSGT00940000154574.c #25 ENSGT00500000044852.a #26 ENSGT00390000004886 ENSGT00390000012731.a.a #27 ENSGT00940000155171.a.b #28 ENSGT00390000000183.g.b #29 ENSGT00390000000183.g.a #29 ENSGT00940000161663 ENSGT00550000074988 #30 ENSGT00390000014771.a #31 ENSGT00940000158036 #33 ENSGT00940000155822 ENSGT01030000234607.A.a.a.a ENSGT00390000015121 Common canary DUPLICATION Common canary DUPLICATION Common canary MODERN SPECIES CDH10 (ENSSCAG00000004024) #7 ENSSCAG00000004047 CDH12 (ENSSCAG00000004098) #9 CDH18 (ENSSCAG00000004161) #10 BASP1 (ENSSCAG00000004194) MYO10 (ENSSCAG00000004205) #11 RETREG1 (ENSSCAG00000004221) #12 ZNF622 (ENSSCAG00000004227) #13 ENSSCAG00000004232 #14 FBXL7 (ENSSCAG00000004243) #15 ANKH (ENSSCAG00000004265) #17 OTULIN (ENSSCAG00000004273) #18 OTULINL (ENSSCAG00000004288) #19 TRIO (ENSSCAG00000004308) #21 ENSSCAG00000004325 #22 ENSSCAG00000004333 #22 ENSSCAG00000004377 #22 CTNND2 (ENSSCAG00000004440) #24 DAP (ENSSCAG00000004526) #25 ANKRD33B (ENSSCAG00000004533) #26 SNRNP48 (ENSSCAG00000004553) ROPN1L (ENSSCAG00000004562) #27 MARCHF6 (ENSSCAG00000004567) #28 ENSSCAG00000004574 #29 ENSSCAG00000004578 #29 SBK2 (ENSSCAG00000004581) CCT5 (ENSSCAG00000004583) #30 ATPSCKMT (ENSSCAG00000004585) #31 SEMA5A (ENSSCAG00000004619) #33 MTRR (ENSSCAG00000004661) FASTKD3 (ENSSCAG00000004672) Common canary MODERN SPECIES CDH9 (ENSSCAG00000003904) CDH10 (ENSSCAG00000004024) #7 ENSSCAG00000004047 CDH12 (ENSSCAG00000004098) #9 CDH18 (ENSSCAG00000004161) #10 BASP1 (ENSSCAG00000004194) MYO10 (ENSSCAG00000004205) #11 RETREG1 (ENSSCAG00000004221) #12 ZNF622 (ENSSCAG00000004227) #13 ENSSCAG00000004232 #14 FBXL7 (ENSSCAG00000004243) #15 ANKH (ENSSCAG00000004265) #17 OTULIN (ENSSCAG00000004273) #18 OTULINL (ENSSCAG00000004288) #19 TRIO (ENSSCAG00000004308) #21 ENSSCAG00000004325 #22 ENSSCAG00000004333 #22 ENSSCAG00000004377 #22 CTNND2 (ENSSCAG00000004440) #24 DAP (ENSSCAG00000004526) #25 ANKRD33B (ENSSCAG00000004533) #26 SNRNP48 (ENSSCAG00000004553) ROPN1L (ENSSCAG00000004562) #27 MARCHF6 (ENSSCAG00000004567) #28 ENSSCAG00000004574 #29 ENSSCAG00000004578 #29 SBK2 (ENSSCAG00000004581) CCT5 (ENSSCAG00000004583) #30 ATPSCKMT (ENSSCAG00000004585) #31 SEMA5A (ENSSCAG00000004619) #33 MTRR (ENSSCAG00000004661) Common canary MODERN SPECIES ENSSCAG00000004047 CDH12 (ENSSCAG00000004098) #9 CDH18 (ENSSCAG00000004161) #10 BASP1 (ENSSCAG00000004194) MYO10 (ENSSCAG00000004205) #11 RETREG1 (ENSSCAG00000004221) #12 ZNF622 (ENSSCAG00000004227) #13 ENSSCAG00000004232 #14 FBXL7 (ENSSCAG00000004243) #15 ANKH (ENSSCAG00000004265) #17 OTULIN (ENSSCAG00000004273) #18 OTULINL (ENSSCAG00000004288) #19 TRIO (ENSSCAG00000004308) #21 ENSSCAG00000004325 #22 ENSSCAG00000004333 #22 ENSSCAG00000004377 #22 CTNND2 (ENSSCAG00000004440) #24 DAP (ENSSCAG00000004526) #25 ANKRD33B (ENSSCAG00000004533) #26 SNRNP48 (ENSSCAG00000004553) ROPN1L (ENSSCAG00000004562) #27 MARCHF6 (ENSSCAG00000004567) #28 ENSSCAG00000004574 #29 ENSSCAG00000004578 #29 SBK2 (ENSSCAG00000004581) CCT5 (ENSSCAG00000004583) #30 ATPSCKMT (ENSSCAG00000004585) #31 SEMA5A (ENSSCAG00000004619) #33 MTRR (ENSSCAG00000004661) FASTKD3 (ENSSCAG00000004672) CFAP90 (ENSSCAG00000004675) Zebra finch DUPLICATION Zebra finch DUPLICATION Zebra finch MODERN SPECIES 23 UNC93A (ENSTGUG00000009567) ENSTGUG00000023539 CCR6 (ENSTGUG00000009563) CEP43 (ENSTGUG00000009547) RNASET2 (ENSTGUG00000027712) RPS6KA2 (ENSTGUG00000009488) MPC1 (ENSTGUG00000009482) SFT2D1 (ENSTGUG00000009460) TBXT (ENSTGUG00000009448) PDE10A (ENSTGUG00000009390) QKI (ENSTGUG00000009383) PACRG (ENSTGUG00000009376) PRKN (ENSTGUG00000009367) MAP3K4 (ENSTGUG00000009273) ENSTGUG00000015327 #22 ENSTGUG00000014203 #22 SCCPDH (ENSTGUG00000008414) ENSTGUG00000008437 ENSTGUG00000022144 SRD5A2 (ENSTGUG00000008454) MEMO1 (ENSTGUG00000022722) DPY30 (ENSTGUG00000008482) SPAST (ENSTGUG00000008494) ENSTGUG00000027929 SLC30A6 (ENSTGUG00000008515) QPCT (ENSTGUG00000008529) PRKD3 (ENSTGUG00000008543) NDUFAF7 (ENSTGUG00000008574) CEBPZ (ENSTGUG00000008585) CEBPZOS (ENSTGUG00000008616) CRIM1 (ENSTGUG00000008626) Zebra finch MODERN SPECIES 23 AFDN (ENSTGUG00000009578) UNC93A (ENSTGUG00000009567) ENSTGUG00000023539 CCR6 (ENSTGUG00000009563) CEP43 (ENSTGUG00000009547) RNASET2 (ENSTGUG00000027712) RPS6KA2 (ENSTGUG00000009488) MPC1 (ENSTGUG00000009482) SFT2D1 (ENSTGUG00000009460) TBXT (ENSTGUG00000009448) PDE10A (ENSTGUG00000009390) QKI (ENSTGUG00000009383) PACRG (ENSTGUG00000009376) PRKN (ENSTGUG00000009367) MAP3K4 (ENSTGUG00000009273) ENSTGUG00000015327 #22 ENSTGUG00000014203 #22 SCCPDH (ENSTGUG00000008414) ENSTGUG00000008437 ENSTGUG00000022144 SRD5A2 (ENSTGUG00000008454) MEMO1 (ENSTGUG00000022722) DPY30 (ENSTGUG00000008482) SPAST (ENSTGUG00000008494) ENSTGUG00000027929 SLC30A6 (ENSTGUG00000008515) QPCT (ENSTGUG00000008529) PRKD3 (ENSTGUG00000008543) NDUFAF7 (ENSTGUG00000008574) CEBPZ (ENSTGUG00000008585) CEBPZOS (ENSTGUG00000008616) Zebra finch MODERN SPECIES 23 RSPH9 (ENSTGUG00000008150) PLD5 (ENSTGUG00000008155) CEP170 (ENSTGUG00000008164) ENSTGUG00000008192 AKT3 (ENSTGUG00000008212) ZBTB18 (ENSTGUG00000008247) ADSS2 (ENSTGUG00000008252) DESI2 (ENSTGUG00000024880) HNRNPU (ENSTGUG00000008309) EFCAB2 (ENSTGUG00000019448) KIF26B (ENSTGUG00000008377) ENSTGUG00000029207 ENSTGUG00000021382 TFB2M (ENSTGUG00000008396) CNST (ENSTGUG00000008403) ENSTGUG00000009271 #22 ENSTGUG00000009240 ENSTGUG00000009224 MAD2L1BP (ENSTGUG00000025478) GTPBP2 (ENSTGUG00000009198) POLH (ENSTGUG00000009195) XPO5 (ENSTGUG00000009168) POLR1C (ENSTGUG00000009159) YIPF3 (ENSTGUG00000009133) LRRC73 (ENSTGUG00000009122) ENSTGUG00000026328 DLK2 (ENSTGUG00000021435) ENSTGUG00000009082 ZNF318 (ENSTGUG00000009066) FAM98A (ENSTGUG00000009042) RASGRP3 (ENSTGUG00000009015) Medium ground finch MODERN SPECIES 43 CDH12 (ENSGFOG00000001518) #9 CDH18 (ENSGFOG00000001505) #10 BASP1 (ENSGFOG00000013004) MYO10 (ENSGFOG00000012959) #11 RETREG1 (ENSGFOG00000012951) #12 ZNF622 (ENSGFOG00000012949) #13 MARCHF11 (ENSGFOG00000012947) #14 FBXL7 (ENSGFOG00000012944) #15 ANKH (ENSGFOG00000012941) #17 OTULIN (ENSGFOG00000012939) #18 OTULINL (ENSGFOG00000012937) #19 TRIO (ENSGFOG00000012551) #21 DNAH5 (ENSGFOG00000012373) #22 ENSGFOG00000012362 #24 ENSGFOG00000012345 #24 DAP (ENSGFOG00000012339) #25 ANKRD33B (ENSGFOG00000012281) #26 SNRNP48 (ENSGFOG00000012263) ROPN1L (ENSGFOG00000012258) #27 MARCHF6 (ENSGFOG00000012243) #28 ENSGFOG00000012228 #29 ENSGFOG00000012223 #29 SBK2 (ENSGFOG00000012218) CCT5 (ENSGFOG00000012214) #30 ATPSCKMT (ENSGFOG00000012209) #31 Passeriformes_g ANCESTRAL SPECIES ENSGT00940000155533.d.d #22 Passeroidea ANCESTRAL SPECIES ENSGT00940000155533.d.d #22 Zebra finch MODERN SPECIES 12 TNS3 (ENSTGUG00000007104) RAMP3 (ENSTGUG00000025072) ADCY1 (ENSTGUG00000007142) IGFBP1 (ENSTGUG00000007176) IGFBP3 (ENSTGUG00000028736) CDH18 (ENSTGUG00000007189) #10 BASP1 (ENSTGUG00000007269) MYO10 (ENSTGUG00000007271) #11 ZNF622 (ENSTGUG00000007377) #13 MARCHF11 (ENSTGUG00000007392) #14 FBXL7 (ENSTGUG00000027230) #15 ANKH (ENSTGUG00000007404) #17 OTULIN (ENSTGUG00000007427) #18 OTULINL (ENSTGUG00000007437) #19 TRIO (ENSTGUG00000007442) #21 ENSTGUG00000007486 #22 ENSTGUG00000027510 #24 ENSTGUG00000007531 #24 ENSTGUG00000027879 ANKRD33B (ENSTGUG00000026776) #26 SNRNP48 (ENSTGUG00000007575) ROPN1L (ENSTGUG00000007586) #27 MARCHF6 (ENSTGUG00000007587) #28 ENSTGUG00000007618 #29 ENSTGUG00000007622 #29 SBK2 (ENSTGUG00000021210) CCT5 (ENSTGUG00000007632) #30 ATPSCKMT (ENSTGUG00000007661) #31 SEMA5A (ENSTGUG00000007664) #33 MTRR (ENSTGUG00000007702) FASTKD3 (ENSTGUG00000007732) Flycatcher MODERN SPECIES 11 CDH9 (ENSFALG00000012759) CDH10 (ENSFALG00000007598) #7 CDH12 (ENSFALG00000007539) #9 CDH18 (ENSFALG00000007516) #10 BASP1 (ENSFALG00000014299) MYO10 (ENSFALG00000007507) #11 RETREG1 (ENSFALG00000028884) #12 ZNF622 (ENSFALG00000007501) #13 MARCHF11 (ENSFALG00000007497) #14 FBXL7 (ENSFALG00000025992) #15 ANKH (ENSFALG00000007483) #17 ENSFALG00000026822 OTULIN (ENSFALG00000007473) #18 OTULINL (ENSFALG00000024218) #19 TRIO (ENSFALG00000007445) #21 DNAH5 (ENSFALG00000007364) #22 CTNND2 (ENSFALG00000007784) #24 DAP (ENSFALG00000026204) #25 ANKRD33B (ENSFALG00000007796) #26 ENSFALG00000007797 ROPN1L (ENSFALG00000026260) #27 MARCHF6 (ENSFALG00000007802) #28 ENSFALG00000007809 #29 ENSFALG00000007815 #29 ENSFALG00000026087 CCT5 (ENSFALG00000007823) #30 ATPSCKMT (ENSFALG00000007830) #31 SEMA5A (ENSFALG00000007836) #33 MTRR (ENSFALG00000007168) FASTKD3 (ENSFALG00000007171) ENSFALG00000028162 Great tit MODERN SPECIES 11 FIGNL1 (ENSPMJG00000002898) DDC (ENSPMJG00000002903) GRB10 (ENSPMJG00000002920) ENSPMJG00000002985 CDH18 (ENSPMJG00000003298) #10 BASP1 (ENSPMJG00000003334) MYO10 (ENSPMJG00000003347) #11 RETREG1 (ENSPMJG00000003430) #12 ZNF622 (ENSPMJG00000003437) #13 MARCHF11 (ENSPMJG00000003442) #14 FBXL7 (ENSPMJG00000003474) #15 ANKH (ENSPMJG00000003609) #17 OTULIN (ENSPMJG00000003628) #18 OTULINL (ENSPMJG00000003634) #19 TRIO (ENSPMJG00000003674) #21 DNAH5 (ENSPMJG00000003714) #22 CTNND2 (ENSPMJG00000005003) #24 DAP (ENSPMJG00000006187) #25 ENSPMJG00000006188 #26 ENSPMJG00000006189 #26 SNRNP48 (ENSPMJG00000006195) ROPN1L (ENSPMJG00000006209) #27 MARCHF6 (ENSPMJG00000006216) #28 ENSPMJG00000006232 #29 ENSPMJG00000006252 #29 ENSPMJG00000006254 CCT5 (ENSPMJG00000006258) #30 ATPSCKMT (ENSPMJG00000006262) #31 SEMA5A (ENSPMJG00000006304) #33 ENSPMJG00000006493 MTRR (ENSPMJG00000006495) African ostrich MODERN SPECIES 962 OTULINL (ENSSCUG00000018152) #19 TRIO (ENSSCUG00000018130) #21 DNAH5 (ENSSCUG00000018095) #22 Australian saltwater crocodile MODERN SPECIES CDH10 (ENSCPRG00005016543) #7 CDH12 (ENSCPRG00005016516) #9 CDH18 (ENSCPRG00005016488) #10 ENSCPRG00005016472 ENSCPRG00005016456 BASP1 (ENSCPRG00005016454) MYO10 (ENSCPRG00005016306) #11 RETREG1 (ENSCPRG00005016280) #12 ZNF622 (ENSCPRG00005016273) #13 MARCHF11 (ENSCPRG00005016246) #14 FBXL7 (ENSCPRG00005016244) #15 ANKH (ENSCPRG00005016224) #17 OTULIN (ENSCPRG00005016220) #18 OTULINL (ENSCPRG00005016210) #19 TRIO (ENSCPRG00005015283) #21 DNAH5 (ENSCPRG00005015027) #22 CTNND2 (ENSCPRG00005014971) #24 ENSCPRG00005014921 ANKRD33B (ENSCPRG00005014899) #26 ROPN1L (ENSCPRG00005014893) #27 MARCHF6 (ENSCPRG00005014885) #28 CCT5 (ENSCPRG00005014871) #30 ATPSCKMT (ENSCPRG00005014868) #31 SEMA5A (ENSCPRG00005014820) #33 MTRR (ENSCPRG00005014774) CFAP90 (ENSCPRG00005014773) ADCY2 (ENSCPRG00005014765) TENT4A (ENSCPRG00005014739) SRD5A1 (ENSCPRG00005014730) NSUN2 (ENSCPRG00005014722) UBE2QL1 (ENSCPRG00005014720) Cryptodira ANCESTRAL SPECIES 46 ENSGT00940000157512 #10 ENSGT00730000111450 ENSGT00940000155469 #11 ENSGT00940000160746 #12 ENSGT00390000018047 #13 ENSGT00940000160025 #14 ENSGT00940000158009 #15 ENSGT00390000012189 #17 ENSGT01090000260321 ENSGT00390000009802.b #18 ENSGT00390000009802.a #19 ENSGT00940000166969.b ENSGT00940000154766.a.a #21 ENSGT00940000155533.d #22 ENSGT00940000154952.a.b #24 ENSGT00940000154574.c #25 ENSGT00500000044852.a #26 ENSGT00390000004886 ENSGT00390000012731.a.a #27 ENSGT00940000155171.a.b #28 ENSGT00390000000183.g.b #29 ENSGT00390000000183.h #29 ENSGT00390000000183.g.a #29 ENSGT00940000161663 ENSGT00550000074988 #30 ENSGT00390000014771.a #31 ENSGT00940000158036 #33 ENSGT00940000155822 ENSGT01030000234607.A.a.a.a Chinese turtle DUPLICATION Chinese turtle MODERN SPECIES 625 FBXL7 (ENSPSIG00000013846) #15 ANKH (ENSPSIG00000011686) #17 OTULIN (ENSPSIG00000011025) #18 OTULINL (ENSPSIG00000010476) #19 ENSPSIG00000001075 ENSPSIG00000014147 #21 ENSPSIG00000014126 #22 ENSPSIG00000011078 #22 ENSPSIG00000001058 ENSPSIG00000010791 ENSPSIG00000001051 MARCHF11 (ENSPSIG00000010335) #14 Chinese turtle MODERN SPECIES 625 FBXL7 (ENSPSIG00000013846) #15 ANKH (ENSPSIG00000011686) #17 OTULIN (ENSPSIG00000011025) #18 OTULINL (ENSPSIG00000010476) #19 ENSPSIG00000001075 ENSPSIG00000014147 #21 ENSPSIG00000014126 #22 ENSPSIG00000011078 #22 ENSPSIG00000001058 ENSPSIG00000010791 ENSPSIG00000001051 MARCHF11 (ENSPSIG00000010335) #14 Testudinoidea ANCESTRAL SPECIES 8 ENSGT00940000154187.a.b #9 ENSGT00940000157512 #10 ENSGT00730000111450 ENSGT00940000155469 #11 ENSGT00940000160746 #12 ENSGT00390000018047 #13 ENSGT00940000160025 #14 ENSGT00940000158009 #15 ENSGT00390000012189 #17 ENSGT01090000260321 ENSGT00390000009802.b #18 ENSGT00390000009802.a #19 ENSGT00940000154766.a.a.bb #21 ENSGT00940000155533.d #22 ENSGT00940000154952.a.b #24 ENSGT00940000154574.c #25 ENSGT00500000044852.a #26 ENSGT00390000004886 ENSGT00390000012731.a.a #27 ENSGT00940000155171.a.b #28 ENSGT00390000000183.g.b #29 ENSGT00390000000183.h #29 ENSGT00390000000183.g.a #29 ENSGT00940000161663 ENSGT00550000074988 #30 ENSGT00390000014771.a #31 ENSGT00940000158036 #33 ENSGT00940000155822 ENSGT01030000234607.A.a.a.a Emydidae ANCESTRAL SPECIES 58 ENSGT00940000154187.a.b #9 ENSGT00940000157512 #10 ENSGT00730000111450 ENSGT00940000155469 #11 ENSGT00940000160746 #12 ENSGT00390000018047 #13 ENSGT00940000160025 #14 ENSGT00940000158009 #15 ENSGT00390000012189 #17 ENSGT01090000260321 ENSGT00390000009802.b #18 ENSGT00390000009802.a #19 ENSGT00940000154766.a.a.bb #21 ENSGT00940000155533.d #22 ENSGT00940000154952.a.b #24 ENSGT00940000154574.c #25 ENSGT00500000044852.a #26 ENSGT00940000155171.a.b #28 ENSGT00390000000183.g.b #29 ENSGT00390000000183.h #29 ENSGT00390000000183.g.a #29 ENSGT00940000161663 ENSGT00550000074988 #30 ENSGT00390000014771.a #31 ENSGT00940000158036 #33 ENSGT00940000155822 ENSGT01030000234607.A.a.a.a ENSGT00390000015121 ENSGT00940000156424 Three-toed box turtle MODERN SPECIES 280 OTULINL (ENSTMTG00000009575) #19 TRIO (ENSTMTG00000005673) #21 DNAH5 (ENSTMTG00000005075) #22 ENSTMTG00000005004 ENSTMTG00000004965 CTNND2 (ENSTMTG00000004668) #24 DAP (ENSTMTG00000004624) #25 ENSTMTG00000004607 #26 ENSTMTG00000004592 #26 MARCHF6 (ENSTMTG00000004525) #28 ENSTMTG00000004479 #29 ENSTMTG00000004453 #29 SBK2 (ENSTMTG00000004421) CCT5 (ENSTMTG00000004387) #30 ATPSCKMT (ENSTMTG00000004376) #31 SEMA5A (ENSTMTG00000004239) #33 MTRR (ENSTMTG00000004193) FASTKD3 (ENSTMTG00000004174) painted turtle MODERN SPECIES 2416 ANKH (ENSCPBG00000028358) #17 ENSCPBG00000028359 OTULIN (ENSCPBG00000028360) #18 OTULINL (ENSCPBG00000028361) #19 TRIO (ENSCPBG00000028362) #21 DNAH5 (ENSCPBG00000028363) #22 ENSCPBG00000028364 ENSCPBG00000028365 ENSCPBG00000028366 ENSCPBG00000028367 ENSCPBG00000028368 CTNND2 (ENSCPBG00000028369) #24 DAP (ENSCPBG00000028370) #25 ANKRD33B (ENSCPBG00000028371) #26 Testudinidae ANCESTRAL SPECIES 1 ENSGT00940000154187.a.b #9 ENSGT00940000157512 #10 ENSGT00730000111450 ENSGT00940000155469 #11 ENSGT00940000160746 #12 ENSGT00390000018047 #13 ENSGT00940000160025 #14 ENSGT00940000158009 #15 ENSGT00390000012189 #17 ENSGT01090000260321 ENSGT00390000009802.b #18 ENSGT00390000009802.a #19 ENSGT00940000154766.a.a.bb #21 ENSGT00940000155533.d #22 ENSGT00940000154952.a.b #24 ENSGT00940000154574.c #25 ENSGT00500000044852.a #26 ENSGT00390000004886 ENSGT00390000012731.a.a #27 ENSGT00940000155171.a.b #28 ENSGT00390000000183.g.b #29 ENSGT00390000000183.h #29 ENSGT00390000000183.g.a #29 ENSGT00940000161663 ENSGT00550000074988 #30 ENSGT00390000014771.a #31 ENSGT00940000158036 #33 ENSGT00940000155822 ENSGT01030000234607.A.a.a.a Abingdon island giant tortoise MODERN SPECIES 947 ENSCABG00000002277 #22 Goode s thornscrub tortoise MODERN SPECIES 11 ENSGEVG00005000582 ENSGEVG00005000572 ENSGEVG00005000556 CDH12 (ENSGEVG00005000540) #9 CDH18 (ENSGEVG00005000511) #10 BASP1 (ENSGEVG00005000485) MYO10 (ENSGEVG00005000330) #11 RETREG1 (ENSGEVG00005000289) #12 ZNF622 (ENSGEVG00005000274) #13 MARCHF11 (ENSGEVG00005000252) #14 FBXL7 (ENSGEVG00005000212) #15 ANKH (ENSGEVG00005000152) #17 OTULIN (ENSGEVG00005000104) #18 OTULINL (ENSGEVG00005008156) #19 TRIO (ENSGEVG00005004120) #21 DNAH5 (ENSGEVG00005003470) #22 CTNND2 (ENSGEVG00005003403) #24 DAP (ENSGEVG00005003390) #25 ENSGEVG00005003387 #26 ENSGEVG00005003384 #26 SNRNP48 (ENSGEVG00005003377) ROPN1L (ENSGEVG00005003331) #27 MARCHF6 (ENSGEVG00005003254) #28 ENSGEVG00005003162 #29 ENSGEVG00005003097 #29 ENSGEVG00005003084 #29 SBK2 (ENSGEVG00005003071) CCT5 (ENSGEVG00005003051) #30 ATPSCKMT (ENSGEVG00005003039) #31 SEMA5A (ENSGEVG00005003004) #33 ENSGEVG00005002987 Lepidosauria ANCESTRAL SPECIES 2 ENSGT00940000154187.a.a #7 ENSGT00940000154673.b ENSGT00940000157512 #10 ENSGT00730000111450 ENSGT00940000155469 #11 ENSGT00940000160746 #12 ENSGT00390000018047 #13 ENSGT00940000160025 #14 ENSGT00940000158009 #15 ENSGT00390000012189 #17 ENSGT01090000260321 ENSGT00390000009802.b #18 ENSGT00390000009802.a #19 ENSGT00940000166969.b ENSGT00940000154766.a.a #21 ENSGT00940000155533.d #22 ENSGT00940000154952.a.b #24 ENSGT00940000154574.c #25 ENSGT00500000044852.a #26 ENSGT00390000004886 ENSGT00390000012731.a.a #27 ENSGT00940000155171.a.b #28 ENSGT00390000000183.g.b #29 ENSGT00390000000183.g.a #29 ENSGT00940000156325 ENSGT00940000157664 ENSGT00940000157173 ENSGT00940000155783 ENSGT00390000000916 ENSGT01030000234543.F ENSGT00450000040303 tuatara MODERN SPECIES 219 DNAH5 (ENSSPUG00000008989) #22 Episquamata ANCESTRAL SPECIES 1 ENSGT00940000154187.a.a #7 ENSGT00940000154673.b ENSGT00940000157512 #10 ENSGT00730000111450 ENSGT00940000155469 #11 ENSGT00940000160746 #12 ENSGT00390000018047 #13 ENSGT00940000160025 #14 ENSGT00940000158009 #15 ENSGT00390000009802.b #18 ENSGT01090000260321 ENSGT00390000012189 #17 ENSGT00390000009802.a #19 ENSGT00940000166969.b ENSGT00940000154766.a.a #21 ENSGT00940000155533.d #22 ENSGT00940000154952.a.b #24 ENSGT00940000154574.c #25 ENSGT00500000044852.a #26 ENSGT00390000004886 ENSGT00390000012731.a.a #27 ENSGT00940000155171.a.b #28 ENSGT00390000000183.g.b #29 ENSGT00390000000183.g.a #29 ENSGT00940000156325 ENSGT00940000157664 ENSGT00940000157173 ENSGT00940000155783 ENSGT00390000000916 ENSGT01030000234543.F ENSGT00450000040303 Laterata ANCESTRAL SPECIES 5 ENSGT00940000160496.b ENSGT00940000154187.a.a #7 ENSGT00940000154673.b ENSGT00940000157512 #10 ENSGT00730000111450 ENSGT00940000155469 #11 ENSGT00940000160746 #12 ENSGT00390000018047 #13 ENSGT00940000160025 #14 ENSGT00940000158009 #15 ENSGT00390000009802.b #18 ENSGT01090000260321 ENSGT00390000012189 #17 ENSGT00390000009802.a #19 ENSGT00940000154766.a.a #21 ENSGT00940000155533.d #22 ENSGT00940000154952.a.b #24 ENSGT00940000154574.c #25 ENSGT00500000044852.a #26 ENSGT00390000012731.a.a #27 ENSGT00940000155171.a.b #28 ENSGT00390000000183.g.b #29 ENSGT00390000000183.g.a #29 ENSGT00940000156325 ENSGT00940000157664 ENSGT00940000157173 ENSGT00940000155783 ENSGT00390000000916 ENSGT01030000234543.F ENSGT00450000040303 ENSGT00940000156387 Common wall lizard MODERN SPECIES 15 ENSPMRG00000010633 ENSPMRG00000010621 #26 ENSPMRG00000010613 #26 DAP (ENSPMRG00000010609) #25 ENSPMRG00000010602 MYO10 (ENSPMRG00000010277) #11 ENSPMRG00000010209 ZNF622 (ENSPMRG00000010202) #13 MARCHF11 (ENSPMRG00000010197) #14 FBXL7 (ENSPMRG00000010193) #15 OTULIN (ENSPMRG00000010182) #18 ENSPMRG00000010173 ANKH (ENSPMRG00000010162) #17 OTULINL (ENSPMRG00000010151) #19 TRIO (ENSPMRG00000007268) #21 DNAH5 (ENSPMRG00000005858) #22 CTNND2 (ENSPMRG00000005602) #24 BASP1 (ENSPMRG00000005584) ENSPMRG00000005581 ##16 ENSPMRG00000005574 ENSPMRG00000005571 ENSPMRG00000005566 ENSPMRG00000005560 CDH18 (ENSPMRG00000005552) #10 ENSPMRG00000005544 CDH10 (ENSPMRG00000005531) #7 ENSPMRG00000005524 ENSPMRG00000005521 ENSPMRG00000005519 ENSPMRG00000005516 CDH9 (ENSPMRG00000005511) Argentine black and white tegu MODERN SPECIES 36 DNAH5 (ENSSMRG00000014888) #22 ENSSMRG00000015134 ENSSMRG00000015137 CTNND2 (ENSSMRG00000015141) #24 DAP (ENSSMRG00000015144) #25 ENSSMRG00000015145 #26 ENSSMRG00000015146 #26 ROPN1L (ENSSMRG00000015147) #27 MARCHF6 (ENSSMRG00000015148) #28 ENSSMRG00000015149 #29 ENSSMRG00000015150 #29 NFX1 (ENSSMRG00000015151) ANKS6 (ENSSMRG00000015157) GALNT12 (ENSSMRG00000015160) GABBR2 (ENSSMRG00000015161) ENSSMRG00000015163 Toxicofera ANCESTRAL SPECIES 1 ENSGT00940000154187.a.a #7 ENSGT00940000154673.b ENSGT00940000157512 #10 ENSGT00730000111450 ENSGT00940000155469 #11 ENSGT00940000160746 #12 ENSGT00390000018047 #13 ENSGT00940000160025 #14 ENSGT00940000158009 #15 ENSGT00390000009802.b #18 ENSGT01090000260321 ENSGT00390000012189 #17 ENSGT00390000009802.a #19 ENSGT00940000166969.b ENSGT00940000154766.a.a #21 ENSGT00940000155533.d #22 ENSGT00940000154952.a.b #24 ENSGT00940000154574.c #25 ENSGT00500000044852.a #26 ENSGT00390000004886 ENSGT00390000012731.a.a #27 ENSGT00940000155171.a.b #28 ENSGT00390000000183.g.b #29 ENSGT00390000000183.g.a #29 ENSGT00940000156325 ENSGT00940000157664 ENSGT00940000157173 ENSGT00940000155783 ENSGT00390000000916 ENSGT01030000234543.F ENSGT00450000040303 Elapidae ANCESTRAL SPECIES 8 ENSGT00940000160496.b ENSGT00940000154187.a.a #7 ENSGT00940000154673.b ENSGT00940000157512 #10 ENSGT00730000111450 ENSGT00940000155469 #11 ENSGT00940000160746 #12 ENSGT00390000018047 #13 ENSGT00940000160025 #14 ENSGT00940000158009 #15 ENSGT00390000009802.b #18 ENSGT00390000012189 #17 ENSGT00390000009802.a #19 ENSGT00940000166969.b ENSGT00940000154766.a.a #21 ENSGT00940000155533.d #22 ENSGT00940000154952.a.b #24 ENSGT00940000154574.c #25 ENSGT00500000044852.a #26 ENSGT00390000004886 ENSGT00390000012731.a.a #27 ENSGT00940000155171.a.b #28 ENSGT00390000000183.g.b #29 ENSGT00390000000183.g.a #29 ENSGT00940000156325 ENSGT00940000157664 ENSGT00940000157173 ENSGT00940000155783 ENSGT00390000000916 ENSGT01030000234543.F ENSGT00450000040303 Indian cobra MODERN SPECIES 2 CDH10 (ENSNNAG00000007256) #7 ENSNNAG00000007241 ENSNNAG00000007235 ENSNNAG00000007199 CDH18 (ENSNNAG00000007160) #10 BASP1 (ENSNNAG00000007154) ENSNNAG00000007097 RETREG1 (ENSNNAG00000007045) #12 ZNF622 (ENSNNAG00000007008) #13 MARCHF11 (ENSNNAG00000006973) #14 FBXL7 (ENSNNAG00000006960) #15 OTULIN (ENSNNAG00000006936) #18 ANKH (ENSNNAG00000006906) #17 OTULINL (ENSNNAG00000006877) #19 TRIO (ENSNNAG00000003423) #21 DNAH5 (ENSNNAG00000002255) #22 CTNND2 (ENSNNAG00000001906) #24 DAP (ENSNNAG00000001852) #25 ANKRD33B (ENSNNAG00000001844) #26 SNRNP48 (ENSNNAG00000001823) ROPN1L (ENSNNAG00000001800) #27 MARCHF6 (ENSNNAG00000001667) #28 ENSNNAG00000001600 #29 ENSNNAG00000001585 #29 ENSNNAG00000001560 ENSNNAG00000001535 ANKS6 (ENSNNAG00000001492) GALNT12 (ENSNNAG00000001470) GABBR2 (ENSNNAG00000001441) ELP2 (ENSNNAG00000001397) CTNNAL1 (ENSNNAG00000001299) Elapidae_a ANCESTRAL SPECIES 35 ENSGT00940000160496.b ENSGT00940000154187.a.a.e #7 ENSGT00940000154673.b ENSGT00940000157512 #10 ENSGT00730000111450 ENSGT00940000155469 #11 ENSGT00940000160746 #12 ENSGT00390000018047 #13 ENSGT00940000160025 #14 ENSGT00940000158009 #15 ENSGT00390000009802.b #18 ENSGT00390000012189 #17 ENSGT00390000009802.a #19 ENSGT00940000166969.b ENSGT00940000154766.a.a #21 ENSGT00940000155533.d #22 ENSGT00940000154952.a.b #24 ENSGT00940000154574.c #25 ENSGT00500000044852.a #26 ENSGT00390000004886 ENSGT00390000012731.a.a #27 ENSGT00940000155171.a.b #28 ENSGT00390000000183.g.b #29 ENSGT00390000000183.g.a #29 ENSGT00940000156325 ENSGT00940000157664 ENSGT00940000157173 ENSGT00940000155783 ENSGT00390000000916 ENSGT01000000215895 ENSGT01030000234543.F Acanthophiinae ANCESTRAL SPECIES 35 ENSGT00940000154187.a.a.e #7 ENSGT00940000154673.b ENSGT00940000157512 #10 ENSGT00990000212917 ENSGT00730000111450 ENSGT00940000155469 #11 ENSGT00940000160746 #12 ENSGT00390000018047 #13 ENSGT00940000160025 #14 ENSGT00940000158009 #15 ENSGT00390000009802.b #18 ENSGT00390000012189 #17 ENSGT00390000009802.a #19 ENSGT00940000166969.b ENSGT00940000154766.a.a #21 ENSGT00940000155533.d #22 ENSGT00940000154952.a.b #24 ENSGT00940000154574.c.i #25 ENSGT00500000044852.a #26 ENSGT00390000004886 ENSGT00390000012731.a.a #27 ENSGT00940000155171.a.b #28 ENSGT00390000000183.g.b #29 ENSGT00390000000183.g.a #29 ENSGT00940000156325 ENSGT00940000157664 ENSGT00940000157173 ENSGT00940000155783 ENSGT00390000000916 ENSGT01000000215895 ENSGT01030000234543.F Eastern brown snake MODERN SPECIES 15 CDH10 (ENSPTXG00000018105) #7 ENSPTXG00000018102 CDH18 (ENSPTXG00000018100) #10 ENSPTXG00000018098 ENSPTXG00000018097 BASP1 (ENSPTXG00000018096) ENSPTXG00000018083 RETREG1 (ENSPTXG00000018082) #12 ZNF622 (ENSPTXG00000018081) #13 MARCHF11 (ENSPTXG00000018080) #14 FBXL7 (ENSPTXG00000018079) #15 OTULIN (ENSPTXG00000018078) #18 ANKH (ENSPTXG00000018077) #17 OTULINL (ENSPTXG00000018075) #19 TRIO (ENSPTXG00000013305) #21 DNAH5 (ENSPTXG00000013268) #22 CTNND2 (ENSPTXG00000013231) #24 DAP (ENSPTXG00000013228) #25 ANKRD33B (ENSPTXG00000013224) #26 SNRNP48 (ENSPTXG00000013222) ROPN1L (ENSPTXG00000013221) #27 MARCHF6 (ENSPTXG00000013220) #28 ENSPTXG00000013219 #29 ENSPTXG00000013218 #29 NFX1 (ENSPTXG00000004148) ANKS6 (ENSPTXG00000004146) GALNT12 (ENSPTXG00000004143) GABBR2 (ENSPTXG00000004142) ELP2 (ENSPTXG00000004141) ENSPTXG00000004140 CTNNAL1 (ENSPTXG00000004139) Mainland tiger snake MODERN SPECIES 52 CDH18 (ENSNSUG00000008957) #10 ENSNSUG00000008956 BASP1 (ENSNSUG00000008955) MYO10 (ENSNSUG00000008954) #11 RETREG1 (ENSNSUG00000008947) #12 ZNF622 (ENSNSUG00000008946) #13 MARCHF11 (ENSNSUG00000008945) #14 FBXL7 (ENSNSUG00000008944) #15 OTULIN (ENSNSUG00000008942) #18 ANKH (ENSNSUG00000008941) #17 OTULINL (ENSNSUG00000008940) #19 ENSNSUG00000008938 ENSNSUG00000008937 ENSNSUG00000008936 #21 ENSNSUG00000008931 #21 DNAH5 (ENSNSUG00000008930) #22 CTNND2 (ENSNSUG00000008916) #24 ENSNSUG00000008915 #25 ENSNSUG00000008914 #26 ENSNSUG00000008913 #26 SNRNP48 (ENSNSUG00000008912) ROPN1L (ENSNSUG00000008911) #27 ENSNSUG00000008910 MARCHF6 (ENSNSUG00000008391) #28 ENSNSUG00000008384 #29 ENSNSUG00000008372 #29 NFX1 (ENSNSUG00000007856) ANKS6 (ENSNSUG00000007853) GALNT12 (ENSNSUG00000007851) Blue-lipped sea krait MODERN SPECIES 8129 ENSLLTG00000014400 #22 Lizard DUPLICATION Lizard MODERN SPECIES 3 PHACTR1 (ENSACAG00000004337) ENSACAG00000031093 MYO10 (ENSACAG00000000351) #11 RETREG1 (ENSACAG00000000324) #12 ENSACAG00000036779 ZNF622 (ENSACAG00000000306) #13 MARCHF11 (ENSACAG00000000305) #14 FBXL7 (ENSACAG00000000302) #15 ENSACAG00000036252 ENSACAG00000000278 #18 ENSACAG00000034640 ENSACAG00000005537 #17 OTULINL (ENSACAG00000005616) #19 TRIO (ENSACAG00000005742) #21 ENSACAG00000035441 ENSACAG00000005926 #22 ENSACAG00000044167 ENSACAG00000040668 ENSACAG00000038628 ENSACAG00000044597 ENSACAG00000006100 ENSACAG00000035387 CTNND2 (ENSACAG00000002855) #24 ENSACAG00000037772 ENSACAG00000036426 ENSACAG00000023932 ENSACAG00000040490 ENSACAG00000040258 DAP (ENSACAG00000024923) #25 ANKRD33B (ENSACAG00000042057) #26 ENSACAG00000002811 Lizard MODERN SPECIES 1392 ENSACAG00000024115 #22 Anura ANCESTRAL SPECIES 203 ENSGT00940000154766.a.a #21 ENSGT00940000155533.d #22 ENSGT00940000154952.a.b #24 ENSGT00940000154574.c #25 ENSGT00500000044852.a #26 ENSGT00390000012731.a.a #27 ENSGT00940000155171.a.b #28 ENSGT00390000000183.e #29 ENSGT00390000000183.f #29 ENSGT00550000074988 #30 ENSGT00390000014771.a #31 ENSGT00940000158036 #33 ENSGT00940000155822 ENSGT01030000234607.A.a.a.a ENSGT00390000015121 ENSGT00940000156424 Frog DUPLICATION Frog DUPLICATION Frog MODERN SPECIES 7 ENSXETG00000045634 ENSXETG00000043913 ENSXETG00000047661 ENSXETG00000042374 ENSXETG00000047030 ENSXETG00000043561 ENSXETG00000044654 ENSXETG00000039421 ENSXETG00000034075 pzp (ENSXETG00000024227) ENSXETG00000046973 m6pr (ENSXETG00000024225) phc1 (ENSXETG00000024224) ENSXETG00000041581 ENSXETG00000045656 ENSXETG00000047349 #22 ENSXETG00000044283 #22 a2m (ENSXETG00000024219) ENSXETG00000048652 casp2 (ENSXETG00000006978) ENSXETG00000006979 ENSXETG00000043714 ENSXETG00000040568 pzp (ENSXETG00000007942) ENSXETG00000008230 a2ml1 (ENSXETG00000017070) ENSXETG00000042647 ENSXETG00000010226 ENSXETG00000042054 ENSXETG00000006293 prdx3 (ENSXETG00000010230) Frog MODERN SPECIES 7 ENSXETG00000043913 ENSXETG00000047661 ENSXETG00000042374 ENSXETG00000047030 ENSXETG00000043561 ENSXETG00000044654 ENSXETG00000039421 ENSXETG00000034075 pzp (ENSXETG00000024227) ENSXETG00000046973 m6pr (ENSXETG00000024225) phc1 (ENSXETG00000024224) ENSXETG00000041581 ENSXETG00000045656 ENSXETG00000047349 #22 ENSXETG00000044283 #22 a2m (ENSXETG00000024219) ENSXETG00000048652 casp2 (ENSXETG00000006978) ENSXETG00000006979 ENSXETG00000043714 ENSXETG00000040568 pzp (ENSXETG00000007942) ENSXETG00000008230 a2ml1 (ENSXETG00000017070) ENSXETG00000042647 ENSXETG00000010226 ENSXETG00000042054 ENSXETG00000006293 prdx3 (ENSXETG00000010230) rgs10 (ENSXETG00000046414) Frog MODERN SPECIES 6 ENSXETG00000044616 ENSXETG00000049415 ENSXETG00000036948 ENSXETG00000048602 ENSXETG00000043867 slc9a3 (ENSXETG00000023154) atpsckmt (ENSXETG00000023151) #31 cct5 (ENSXETG00000013995) #30 ENSXETG00000047430 ENSXETG00000049467 ENSXETG00000045202 ENSXETG00000030609 msantd3 (ENSXETG00000013983) trio (ENSXETG00000013968) #21 ENSXETG00000042093 dnah5 (ENSXETG00000021408) #22 ctnnd2 (ENSXETG00000022200) #24 dap (ENSXETG00000025633) #25 ankrd33b (ENSXETG00000038702) #26 ENSXETG00000042529 ropn1l (ENSXETG00000003552) #27 marchf6 (ENSXETG00000003553) #28 cmbl (ENSXETG00000025629) #29 ENSXETG00000025628 znfx1.2 (ENSXETG00000003560) ahrr (ENSXETG00000006186) pigm (ENSXETG00000006188) pdcd6 (ENSXETG00000027021) ENSXETG00000046001 anks6 (ENSXETG00000006189) galnt4 (ENSXETG00000006191) Leishan spiny toad MODERN SPECIES 8 ENSLLEG00000025932 SLC6A19 (ENSLLEG00000025994) ENSLLEG00000026065 ENSLLEG00000026137 ENSLLEG00000026808 ENSLLEG00000026856 ENSLLEG00000026881 ENSLLEG00000026968 ENSLLEG00000027015 ENSLLEG00000027104 VWC2 (ENSLLEG00000027128) TRIO (ENSLLEG00000027354) #21 ENSLLEG00000028226 ENSLLEG00000028252 ENSLLEG00000028265 DNAH5 (ENSLLEG00000028329) #22 ENSLLEG00000028571 CTNND2 (ENSLLEG00000028640) #24 ENSLLEG00000028931 ENSLLEG00000028942 ENSLLEG00000028949 DAP (ENSLLEG00000028964) #25 ENSLLEG00000028976 ANKRD33B (ENSLLEG00000028992) #26 ENSLLEG00000029030 MARCHF6 (ENSLLEG00000029060) #28 ENSLLEG00000005336 #29 ENSLLEG00000005370 #29 CCT5 (ENSLLEG00000005409) #30 ATPSCKMT (ENSLLEG00000005487) #31 SEMA5A (ENSLLEG00000005684) #33 Coelacanth MODERN SPECIES 1025 TRIO (ENSLACG00000010439) #21 DNAH5 (ENSLACG00000002629) #22 ENSLACG00000002100 TRGV9 (ENSLACG00000001778) ENSLACG00000001158 ENSLACG00000000671 Actinopterygii ANCESTRAL SPECIES 2 ENSGT00940000176159 ENSGT00940000155365.a.a ENSGT00940000160695 ENSGT00420000029769.a ENSGT00390000007888 ENSGT01100000263542.A ENSGT00940000156004 ENSGT00940000155909 ENSGT00530000063608.A ENSGT01020000230359.A ENSGT01020000230359.B.b ENSGT01020000230359.B.a ENSGT00950000182942.a.a ENSGT00940000166969.b ENSGT00940000154766.a.a #21 ENSGT00940000155533.d #22 ENSGT00390000015121 ENSGT00940000156424 ENSGT00940000157811 ENSGT00950000182886.b.b ENSGT00940000153665.a ENSGT00940000161612 ENSGT00390000014501 ENSGT00950000183199.b ENSGT00940000159433 ENSGT00940000160429.h.a ENSGT00940000161198 ENSGT00940000158596 ENSGT01030000234574.A.a ENSGT00940000161224 ENSGT00530000063461.A Reedfish MODERN SPECIES 4 ano10a (ENSECRG00000018606) rpl14 (ENSECRG00000018656) entpd3 (ENSECRG00000018674) ddc (ENSECRG00000018708) grb10a (ENSECRG00000018751) ENSECRG00000018786 ENSECRG00000018821 CX3CR1 (ENSECRG00000018885) ENSECRG00000011343 ENSECRG00000011368 ENSECRG00000011387 glb1 (ENSECRG00000011418) ENSECRG00000011449 trioa (ENSECRG00000011501) #21 ENSECRG00000011637 DNAH5 (ENSECRG00000011742) #22 CFAP90 (ENSECRG00000011845) adcy2b (ENSECRG00000011869) TENT4A (ENSECRG00000011884) srd5a1 (ENSECRG00000011900) nsun2 (ENSECRG00000011957) ENSECRG00000012012 ENSECRG00000012036 ENSECRG00000012108 tmed3 (ENSECRG00000012180) irx1a (ENSECRG00000012192) irx2a (ENSECRG00000012213) ENSECRG00000012221 irx4a (ENSECRG00000012242) ndufs6 (ENSECRG00000012255) mrpl36 (ENSECRG00000012269) Neopterygii ANCESTRAL SPECIES 23 ENSGT00940000157537 ENSGT00940000176159 ENSGT00940000155365.a.a ENSGT00940000160695 ENSGT00420000029769.a ENSGT01100000263542.A ENSGT00940000156004 ENSGT00940000155909 ENSGT00530000063608.A ENSGT01020000230359.A ENSGT01020000230359.B.b ENSGT01020000230359.B.a ENSGT00950000182942.a.a ENSGT00940000166969.b ENSGT00940000154766.a.a #21 ENSGT00940000155533.d #22 ENSGT00390000015121 ENSGT00940000156424 ENSGT00940000157811 ENSGT00950000182886.b.b ENSGT00940000153665.a ENSGT00940000161612 ENSGT00390000014501 ENSGT00950000183199.b ENSGT00940000159433 ENSGT00940000160429.h.a ENSGT00940000161198 ENSGT00940000158596 ENSGT01030000234574.A.a ENSGT00940000161224 ENSGT00940000159377 Spotted gar MODERN SPECIES 649 snrka (ENSLOCG00000001112) pomgnt2 (ENSLOCG00000018322) GASK1A (ENSLOCG00000001055) rpl14 (ENSLOCG00000001044) entpd3 (ENSLOCG00000001020) ddc (ENSLOCG00000000998) cobl (ENSLOCG00000000944) CX3CR1 (ENSLOCG00000018321) ENSLOCG00000000929 ENSLOCG00000000892 ENSLOCG00000018270 ENSLOCG00000000862 ENSLOCG00000000835 glb1 (ENSLOCG00000000812) trioa (ENSLOCG00000000744) #21 DNAH5 (ENSLOCG00000000680) #22 ENSLOCG00000000645 adcy2b (ENSLOCG00000000614) Osteoglossocephalai ANCESTRAL SPECIES 158 ENSGT00940000157537 ENSGT00940000176159 ENSGT00940000155365.a.a ENSGT00940000160695 ENSGT00420000029769.a ENSGT01100000263542.A ENSGT00940000156004 ENSGT00940000155909.o.a ENSGT00530000063608.A ENSGT01020000230359.A ENSGT01020000230359.B.b ENSGT01020000230359.B.a ENSGT00950000182942.a.a ENSGT00940000166969.b ENSGT00940000154766.a.a #21 ENSGT00940000155533.d #22 ENSGT00940000156424.a ENSGT00940000157811.b.a Osteoglossiformes ANCESTRAL SPECIES 8 ENSGT00940000159099.x.b ENSGT00390000012832 ENSGT00390000012495 ENSGT00390000016277.a.k ENSGT00940000155365.a.a.a ENSGT00940000160695 ENSGT00420000029769.a ENSGT01100000263542.A ENSGT00940000156004 ENSGT00940000155909.o.a.g ENSGT00530000063608.A ENSGT01020000230359.A ENSGT01020000230359.B.b ENSGT01020000230359.B.a ENSGT00950000182942.a.a ENSGT00940000155533.d #22 ENSGT00940000156424.a ENSGT00940000157811.a P. kingsleyae MODERN SPECIES 1 SLA (ENSPKIG00000021885) tg (ENSPKIG00000021671) PHF20L1 (ENSPKIG00000021529) ENSPKIG00000021505 ENSPKIG00000021446 pon1 (ENSPKIG00000021420) dync1i1 (ENSPKIG00000021394) ZFAT (ENSPKIG00000021355) rbfa (ENSPKIG00000021329) zgc:136493 (ENSPKIG00000021305) ENSPKIG00000021286 c1qtnf9 (ENSPKIG00000021279) ENSPKIG00000021262 ENSPKIG00000021251 trioa (ENSPKIG00000021187) #21 DNAH5 (ENSPKIG00000020741) #22 ADCY2 (ENSPKIG00000020549) TENT4A (ENSPKIG00000020499) UBE2QL1 (ENSPKIG00000020483) ice1 (ENSPKIG00000020458) ADAMTS16 (ENSPKIG00000020385) irx1a (ENSPKIG00000020325) irx2a (ENSPKIG00000020276) irx4a (ENSPKIG00000020245) LPCAT1 (ENSPKIG00000020226) slc6a3 (ENSPKIG00000020190) DCDC2 (ENSPKIG00000020174) nrsn1 (ENSPKIG00000020163) sox4b (ENSPKIG00000020154) CDKAL1 (ENSPKIG00000020135) ENSPKIG00000020122 Asian bonytongue MODERN SPECIES 9 ABHD5 (ENSSFOG00015001946) snrka (ENSSFOG00015001970) pomgnt2 (ENSSFOG00015002005) GASK1A (ENSSFOG00015002021) entpd3 (ENSSFOG00015002030) ddc (ENSSFOG00015002454) GRB10 (ENSSFOG00015002512) cobl (ENSSFOG00015002577) ENSSFOG00015002604 CCR8 (ENSSFOG00015002606) CCR8 (ENSSFOG00015002617) glb1 (ENSSFOG00015002680) CCR8 (ENSSFOG00015002711) ENSSFOG00015002733 trioa (ENSSFOG00015002766) #21 DNAH5 (ENSSFOG00015002965) #22 ADCY2 (ENSSFOG00015003228) TENT4A (ENSSFOG00015028711) ENSSFOG00015033114 ENSSFOG00015003528 ADAMTS16 (ENSSFOG00015003545) irx1a (ENSSFOG00015003629) irx2a (ENSSFOG00015003644) irx4a (ENSSFOG00015003670) LPCAT1 (ENSSFOG00015003762) slc6a3 (ENSSFOG00015003829) ENSSFOG00015003896 nrsn1 (ENSSFOG00015024787) ENSSFOG00015003934 CDKAL1 (ENSSFOG00015004003) ENSSFOG00015004019 Clupeocephala ANCESTRAL SPECIES 24 ENSGT00940000160695 ENSGT00420000029769.a ENSGT01100000263542.A ENSGT00940000156004 ENSGT00940000155909.o.a ENSGT00530000063608.A ENSGT01020000230359.A ENSGT01020000230359.B.b ENSGT01020000230359.B.a ENSGT00940000166969.b ENSGT00940000154766.a.a #21 ENSGT00390000015121 ENSGT00940000156424.b ENSGT00940000157811.b.b ENSGT00940000154766.b ##21 ENSGT00940000155533.d #22 ENSGT00940000156424.a ENSGT00940000157811.b.a ENSGT00950000183199.b ENSGT00940000159433 ENSGT00940000160429.h.a ENSGT00940000161198 ENSGT00940000158596.a.a ENSGT00940000177739 ENSGT01030000234574.A.a.e.a ENSGT00940000161224 ENSGT00940000159377 ENSGT00530000063877.b.a ENSGT00940000161470.a.a ENSGT00940000155952 ENSGT00940000155115.a.a.a.b Euteleosteomorpha ANCESTRAL SPECIES 77 ENSGT00390000016277.a.k ENSGT00940000157537 ENSGT00940000176159 ENSGT00940000155365.a.a ENSGT00940000160695 ENSGT00420000029769.a ENSGT01100000263542.A ENSGT00940000156004 ENSGT00940000155909.o.a ENSGT00530000063608.A ENSGT01020000230359.A ENSGT01020000230359.B.b ENSGT01020000230359.B.a ENSGT00940000166969.b ENSGT00940000154766.b ##21 ENSGT00940000155533.d #22 ENSGT00940000156424.a ENSGT00940000157811.b.a ENSGT00950000183199.b ENSGT00940000159433 ENSGT00940000160429.h.a ENSGT00940000161198 ENSGT00940000158596.a.a ENSGT00940000179084 ENSGT00940000177739 ENSGT01030000234574.A.a.e.a ENSGT00940000161224 ENSGT00940000159377 ENSGT00530000063877.b.a ENSGT00940000161470.a.a ENSGT00940000155952 Protacanthopterygii ANCESTRAL SPECIES 91 ENSGT00940000161501 ENSGT01030000234607.A.a.b.a ENSGT00940000160695 ENSGT00420000029769.a ENSGT01100000263542.A ENSGT00940000156004 ENSGT00940000155909.o.a ENSGT00530000063608.A ENSGT01020000230359.A ENSGT01020000230359.B.b ENSGT01020000230359.B.a ENSGT00940000154766.b ##21 ENSGT00940000155533.d #22 ENSGT00390000003062 ENSGT00940000165364.a.a ENSGT01030000234988 ENSGT00940000160908 ENSGT00940000157775 ENSGT00530000067342 ENSGT00390000011918 ENSGT00940000163587.b ENSGT00390000005284.b ENSGT00940000161757 ENSGT00940000154370.d ENSGT00560000077232.A.a ENSGT00940000159733 ENSGT00940000158047 ENSGT00940000156904.a.b Salmoninae ANCESTRAL SPECIES 498 ENSGT00530000063608.A.gb ENSGT01020000230359.A.r ENSGT01020000230359.B.b.b ENSGT01020000230359.B.a.p ENSGT00940000154766.b ##21 ENSGT00940000155533.d #22 ENSGT00390000003062 ENSGT00940000165364.a.a.p ENSGT01030000234988.e ENSGT00940000160908.i ENSGT00940000157775.q.b ENSGT00530000067342.e ENSGT00940000163587.b.g ENSGT00390000005284.b.c ENSGT00940000161757.`b ENSGT00560000077232.A.a.a ENSGT00940000159733.g.a ENSGT00940000158047.l ENSGT00940000156904.a.b.c ENSGT00390000005711.b ENSGT00940000155236.r.b Salmoninae_a DUPLICATION Salmoninae_a ANCESTRAL SPECIES 96 ENSGT01100000263515.a.b.a.b.b.k.a.a.b ENSGT00390000008042.B.o.b.b.a ENSGT00390000020276.kb.b ENSGT00940000161501.a ENSGT01030000234607.A.a.b.a.d ENSGT00940000160695.d ENSGT00420000029769.a.i.a ENSGT01100000263542.A.c ENSGT00940000156004.t ENSGT00940000155909.o.a.a ENSGT00530000063608.A.gb ENSGT01020000230359.A.r ENSGT01020000230359.B.b.b ENSGT01020000230359.B.a.p ENSGT00940000154766.b.t.b ##21 ENSGT00940000155533.d.m #22 ENSGT00390000003062 ENSGT00940000165364.a.a.p ENSGT01030000234988.e ENSGT00940000160908.i ENSGT00940000157775.q.b ENSGT00530000067342.e ENSGT00940000163587.b.g ENSGT00390000005284.b.d ENSGT00940000161757.ab ENSGT00560000077232.A.a.b ENSGT00940000159733.g.a.a ENSGT00940000158047.k ENSGT00940000156904.a.b.c.b ENSGT00390000005711.b Salmo ANCESTRAL SPECIES 32 ENSGT01100000263515.a.b.a.b.b.k.a.a.b ENSGT00390000008042.B.o.b.b.a.a ENSGT00390000020276.kb.b ENSGT00940000161501.a ENSGT01030000234607.A.a.b.a.d ENSGT00940000160695.d ENSGT00420000029769.a.i.a ENSGT01100000263542.A.c ENSGT00940000156004.t ENSGT00940000155909.o.a.a ENSGT00530000063608.A.gb ENSGT01020000230359.A.r ENSGT01020000230359.B.b.b ENSGT01020000230359.B.a.p ENSGT00940000154766.b.t.b ##21 ENSGT00940000155533.d.m #22 ENSGT00390000003062 ENSGT00940000165364.a.a.p ENSGT01030000234988.e ENSGT00940000160908.i ENSGT00940000157775.q.b ENSGT00530000067342.e ENSGT00940000163587.b.g ENSGT00390000005284.b.d ENSGT00940000161757.ab ENSGT00940000154370.d.b.d.c.a ENSGT00560000077232.A.a.b ENSGT00940000159733.g.b.b ENSGT00940000158047.k ENSGT00940000156904.a.b.c.b ENSGT00390000005711.a.a.a River trout MODERN SPECIES 30 steap4 (ENSSTUG00000042311) glipr2l (ENSSTUG00000042236) ENSSTUG00000042211 TBRG4 (ENSSTUG00000042159) pomgnt2 (ENSSTUG00000042138) GASK1A (ENSSTUG00000042120) entpd3 (ENSSTUG00000042104) ENSSTUG00000042101 ddc (ENSSTUG00000041458) GRB10 (ENSSTUG00000039099) cobl (ENSSTUG00000038969) ENSSTUG00000038964 ENSSTUG00000038954 CCR8 (ENSSTUG00000038949) ENSSTUG00000034091 ##21 DNAH5 (ENSSTUG00000032873) #22 ENSSTUG00000032824 ENSSTUG00000032809 g6fl (ENSSTUG00000032734) abhd16a (ENSSTUG00000032516) vars1 (ENSSTUG00000029873) ENSSTUG00000029807 ENSSTUG00000029770 ENSSTUG00000029758 tubb5 (ENSSTUG00000029651) flot1b (ENSSTUG00000029305) ENSSTUG00000029014 gnl1 (ENSSTUG00000028943) znf384b (ENSSTUG00000028925) dcaf13 (ENSSTUG00000028802) RIMS2 (ENSSTUG00000026524) Atlantic salmon MODERN SPECIES 11 ENSSSAG00000042166 steap4 (ENSSSAG00000041680) ENSSSAG00000089316 ENSSSAG00000083385 ENSSSAG00000041485 pomgnt2 (ENSSSAG00000092435) ENSSSAG00000041471 entpd3 (ENSSSAG00000041445) ddc (ENSSSAG00000039933) ENSSSAG00000037403 cobl (ENSSSAG00000036348) ENSSSAG00000036208 ENSSSAG00000035944 ENSSSAG00000089081 ENSSSAG00000072408 ##21 ENSSSAG00000101335 #22 ENSSSAG00000120311 ENSSSAG00000111507 g6fl (ENSSSAG00000072097) abhd16a (ENSSSAG00000071506) vars1 (ENSSSAG00000068921) ENSSSAG00000068860 ENSSSAG00000068858 ENSSSAG00000082007 ENSSSAG00000084585 ENSSSAG00000068852 ENSSSAG00000097531 tubb5 (ENSSSAG00000110640) ENSSSAG00000086685 flot1b (ENSSSAG00000068819) ENSSSAG00000055704 Oncorhynchus ANCESTRAL SPECIES 61 ENSGT01030000235896.A ENSGT00390000008042.B.o.a ENSGT00390000020276.kb.b ENSGT00940000161501.a ENSGT01030000234607.A.a.b.a.d ENSGT00940000160695.d ENSGT00420000029769.a.j.b ENSGT01100000263542.A.c ENSGT00940000156004.t ENSGT00940000155909.o.a.a ENSGT00530000063608.A.gb ENSGT01020000230359.A.r ENSGT01020000230359.B.b.b ENSGT01020000230359.B.a.p ENSGT00940000154766.b.t.b ##21 ENSGT00940000155533.d.m #22 ENSGT00390000003062 ENSGT00940000165364.a.a.p ENSGT01030000234988.e ENSGT00940000160908.i ENSGT00940000157775.q.b ENSGT00530000067342.e ENSGT00940000163587.b.g ENSGT00390000005284.b.c.a ENSGT00940000161757.ab ENSGT00560000077232.A.a.b ENSGT00940000159733.g.a.a ENSGT00940000158047.k ENSGT00940000156904.a.b.c.b ENSGT00390000005711.b ENSGT00940000155236.r.a.a Rainbow trout MODERN SPECIES 21 steap4 (ENSOMYG00000014102) ENSOMYG00000014084 ENSOMYG00000070680 ENSOMYG00000014002 pomgnt2 (ENSOMYG00000013991) ENSOMYG00000013985 entpd3 (ENSOMYG00000013925) ddc (ENSOMYG00000013814) ENSOMYG00000012299 ENSOMYG00000053099 cobl (ENSOMYG00000012164) ENSOMYG00000012147 ENSOMYG00000012144 ENSOMYG00000012124 ENSOMYG00000008537 ##21 ENSOMYG00000005659 #22 ENSOMYG00000066708 ENSOMYG00000004950 g6fl (ENSOMYG00000004908) ENSOMYG00000063643 abhd16a (ENSOMYG00000004403) vars1 (ENSOMYG00000003069) ENSOMYG00000002937 ino80e (ENSOMYG00000002923) ENSOMYG00000002897 ENSOMYG00000002885 mdc1 (ENSOMYG00000074282) ENSOMYG00000057054 flot1b (ENSOMYG00000002799) ENSOMYG00000058988 ENSOMYG00000002617 Oncorhynchus_a ANCESTRAL SPECIES 68 ENSGT00390000008042.B.o.a ENSGT00390000020276.kb.b ENSGT00940000161501.a ENSGT01030000234607.A.a.b.a.d ENSGT00940000160695.d ENSGT00420000029769.a.j.b ENSGT01100000263542.A.c ENSGT00940000156004.t ENSGT00940000155909.o.a.a ENSGT00530000063608.A.gb ENSGT01020000230359.A.r ENSGT01020000230359.B.b.b ENSGT01020000230359.B.a.p ENSGT01030000238767 ENSGT00940000154766.b.t.b ##21 ENSGT00940000155533.d.m #22 ENSGT00390000003062 ENSGT00940000165364.a.a.p ENSGT01030000234988.e ENSGT00940000160908.i ENSGT00940000157775.q.b ENSGT00530000067342.e ENSGT00940000163587.b.g ENSGT00390000005284.b.c.a ENSGT00390000005284.b.d ENSGT00940000161757.ab ENSGT00560000077232.A.a.b ENSGT00940000159733.g.a.a ENSGT00940000158047.k ENSGT00940000156904.a.b.d ENSGT00940000156904.a.b.c.b Chinook salmon MODERN SPECIES 22 ENSOTSG00005010298 pomgnt2 (ENSOTSG00005010297) GASK1A (ENSOTSG00005010296) entpd3 (ENSOTSG00005010295) ddc (ENSOTSG00005010107) GRB10 (ENSOTSG00005006360) cobl (ENSOTSG00005006347) ENSOTSG00005006341 ENSOTSG00005006340 CCR8 (ENSOTSG00005006338) ENSOTSG00005006317 ENSOTSG00005004852 ##21 DNAH5 (ENSOTSG00005004351) #22 ENSOTSG00005004335 ENSOTSG00005004330 DNAH5 (ENSOTSG00005004292) #22 ENSOTSG00005004275 ENSOTSG00005004270 g6fl (ENSOTSG00005004154) abhd16a (ENSOTSG00005002054) vars1 (ENSOTSG00005000173) ENSOTSG00005000121 ENSOTSG00005000118 ENSOTSG00005000117 ENSOTSG00005000115 flot1b (ENSOTSG00005000108) ENSOTSG00005043664 gnl1 (ENSOTSG00005043646) znf384b (ENSOTSG00005043644) dcaf13 (ENSOTSG00005043633) RIMS2 (ENSOTSG00005042270) Coho salmon MODERN SPECIES 11 TBRG4 (ENSOKIG00005007453) ENSOKIG00005007451 pomgnt2 (ENSOKIG00005007447) GASK1A (ENSOKIG00005007442) entpd3 (ENSOKIG00005007409) ddc (ENSOKIG00005007280) ENSOKIG00005007246 ENSOKIG00005007237 GRB10 (ENSOKIG00005004728) cobl (ENSOKIG00005004553) ENSOKIG00005004531 ENSOKIG00005004519 CCR8 (ENSOKIG00005004502) ENSOKIG00005004485 ENSOKIG00005002856 ##21 DNAH5 (ENSOKIG00005002442) #22 ENSOKIG00005002407 ENSOKIG00005002376 g6fl (ENSOKIG00005002329) abhd16a (ENSOKIG00005002152) vars1 (ENSOKIG00005001693) ENSOKIG00005001663 ENSOKIG00005001660 ENSOKIG00005001655 ENSOKIG00005001645 flot1b (ENSOKIG00005001576) DDR1 (ENSOKIG00005001477) GNL1 (ENSOKIG00005001432) znf384b (ENSOKIG00005001416) dcaf13 (ENSOKIG00005001391) RIMS2 (ENSOKIG00005000862) Salmoninae_a ANCESTRAL SPECIES 43 ENSGT00390000008042.B.o.a ENSGT00390000008042.B.o.b.a ENSGT00390000020276.kb.a ENSGT00940000161501.b ENSGT01030000234607.A.a.b.a.c ENSGT00940000160695.c ENSGT00420000029769.a.j ENSGT01100000263542.A.d ENSGT00940000156004.s ENSGT00940000155909.o.a.b ENSGT00530000063608.A.fb ENSGT01020000230359.A.q ENSGT01020000230359.B.b.a ENSGT01020000230359.B.a.o ENSGT00940000154766.b.t.a ##21 ENSGT00940000155533.d.n #22 ENSGT00940000165364.a.a.o ENSGT01030000234988.f ENSGT00940000160908.j ENSGT00940000157775.q.a ENSGT00530000067342.f ENSGT00390000011918 ENSGT00940000163587.b.h ENSGT00390000005284.b.c ENSGT00940000161757.`b ENSGT00940000154370.d.b.d ENSGT00560000077232.A.a.a ENSGT00940000159733.g.a.b ENSGT00940000158047.l ENSGT00940000156904.a.b.c.a ENSGT00390000005711.a.b Salmo ANCESTRAL SPECIES 1 ENSGT00390000008042.B.o.a ENSGT00390000008042.B.o.b.a ENSGT00390000020276.kb.a ENSGT00940000161501.b ENSGT01030000234607.A.a.b.a.c ENSGT00940000160695.c ENSGT00420000029769.a.i.b ENSGT01100000263542.A.d ENSGT00940000156004.s ENSGT00940000155909.o.a.b ENSGT00530000063608.A.fb ENSGT01020000230359.A.q ENSGT01020000230359.B.b.a ENSGT01020000230359.B.a.o ENSGT00940000154766.b.t.a ##21 ENSGT00940000155533.d.n #22 ENSGT00940000165364.a.a.o ENSGT01030000234988.f ENSGT00940000160908.j ENSGT00940000157775.q.a ENSGT00530000067342.f ENSGT00390000011918 ENSGT00940000163587.b.h ENSGT00390000005284.b.c ENSGT00940000161757.`b ENSGT00940000154370.d.b.d.d ENSGT00560000077232.A.a.a ENSGT00940000159733.g.a.b ENSGT00940000158047.l ENSGT00940000156904.a.b.c.a ENSGT00390000005711.a.a.b Atlantic salmon MODERN SPECIES 24 ENSSSAG00000003814 steap4 (ENSSSAG00000003833) steap4 (ENSSSAG00000003949) GAPR1 (ENSSSAG00000004283) ENSSSAG00000089116 ENSSSAG00000004299 ENSSSAG00000004315 pomgnt2 (ENSSSAG00000094248) ENSSSAG00000099606 entpd3 (ENSSSAG00000004418) ddc (ENSSSAG00000004522) ENSSSAG00000004760 cobl (ENSSSAG00000006147) ENSSSAG00000115914 ENSSSAG00000006300 ##21 ENSSSAG00000092363 #22 ENSSSAG00000007499 g6fl (ENSSSAG00000007509) abhd16a (ENSSSAG00000007551) vars1 (ENSSSAG00000008007) ENSSSAG00000015988 ENSSSAG00000113530 ino80e (ENSSSAG00000105425) ENSSSAG00000091411 ENSSSAG00000016135 tubb5 (ENSSSAG00000016311) flot1b (ENSSSAG00000016509) ENSSSAG00000017278 ENSSSAG00000025885 znf384b (ENSSSAG00000026427) dcaf13 (ENSSSAG00000026650) River trout MODERN SPECIES 22 ENSSTUG00000010024 steap4 (ENSSTUG00000010050) glipr2l (ENSSTUG00000010297) ENSSTUG00000010305 TBRG4 (ENSSTUG00000010327) pomgnt2 (ENSSTUG00000010390) GASK1A (ENSSTUG00000010395) entpd3 (ENSSTUG00000010411) ENSSTUG00000010479 ddc (ENSSTUG00000010498) GRB10 (ENSSTUG00000010811) cobl (ENSSTUG00000011846) ENSSTUG00000011872 ENSSTUG00000011880 CCR8 (ENSSTUG00000011887) DNAH5 (ENSSTUG00000012901) #22 ENSSTUG00000013673 g6fl (ENSSTUG00000013694) abhd16a (ENSSTUG00000013737) vars1 (ENSSTUG00000014331) ENSSTUG00000015440 ino80e (ENSSTUG00000015457) ENSSTUG00000015466 ENSSTUG00000015486 mdc1 (ENSSTUG00000015500) ENSSTUG00000015517 flot1b (ENSSTUG00000015542) ENSSTUG00000015658 ENSSTUG00000016047 gnl1 (ENSSTUG00000016056) znf384b (ENSSTUG00000016096) Oncorhynchus ANCESTRAL SPECIES 3 ENSGT00410000028469.e ENSGT00390000008042.B.o.b.a ENSGT00390000020276.kb.a ENSGT00940000161501.b ENSGT01030000234607.A.a.b.a.c ENSGT00940000160695.c ENSGT00420000029769.a.j.a ENSGT01100000263542.A.d ENSGT00940000156004.s ENSGT00940000155909.o.a.b ENSGT00530000063608.A.fb ENSGT01020000230359.A.q ENSGT01020000230359.B.b.a ENSGT01020000230359.B.a.o ENSGT00940000154766.b.t.a ##21 ENSGT00940000155533.d.n #22 ENSGT00940000165364.a.a.o ENSGT01030000234988.f ENSGT00940000160908.j ENSGT00940000157775.q.a ENSGT00530000067342.f ENSGT00390000011918 ENSGT00940000163587.b.h ENSGT00390000005284.b.c.b ENSGT00940000161757.`b ENSGT00940000154370.d.b.d ENSGT00560000077232.A.a.a ENSGT00940000159733.g.a.b ENSGT00940000158047.l ENSGT00940000156904.a.b.c.a ENSGT00390000005711.a.b Rainbow trout MODERN SPECIES 11 glipr2l (ENSOMYG00000016567) ENSOMYG00000016562 ENSOMYG00000016509 ENSOMYG00000071367 pomgnt2 (ENSOMYG00000016503) ENSOMYG00000016494 entpd3 (ENSOMYG00000016443) ddc (ENSOMYG00000016252) ENSOMYG00000015405 cobl (ENSOMYG00000015309) ENSOMYG00000015285 ENSOMYG00000015277 ENSOMYG00000015272 ENSOMYG00000046371 ENSOMYG00000013752 ##21 ENSOMYG00000013009 #22 ENSOMYG00000012842 ENSOMYG00000076564 ENSOMYG00000012827 g6fl (ENSOMYG00000012806) abhd16a (ENSOMYG00000012247) vars1 (ENSOMYG00000010603) ENSOMYG00000010432 ino80e (ENSOMYG00000010423) ENSOMYG00000053020 ENSOMYG00000064233 ENSOMYG00000069395 ENSOMYG00000010396 mdc1 (ENSOMYG00000010376) tubb5 (ENSOMYG00000074503) flot1b (ENSOMYG00000010310) Oncorhynchus_a ANCESTRAL SPECIES 26 ENSGT00410000028469.e ENSGT00390000008042.B.o.b.a ENSGT00390000020276.kb.a ENSGT00940000161501.b ENSGT01030000234607.A.a.b.a.c ENSGT00940000160695.c ENSGT00420000029769.a.j.a ENSGT01100000263542.A.d ENSGT00940000156004.s ENSGT00940000155909.o.a.b ENSGT00530000063608.A.fb ENSGT01020000230359.A.q ENSGT01020000230359.B.b.a ENSGT01020000230359.B.a.o ENSGT00940000154766.b.t.a ##21 ENSGT00940000155533.d.n #22 ENSGT00940000165364.a.a.o ENSGT01030000234988.f ENSGT00940000160908.j ENSGT00940000157775.q.a ENSGT00530000067342.f ENSGT00390000011918 ENSGT00940000163587.b.h ENSGT00390000005284.b.c.b ENSGT00940000161757.`b ENSGT00940000154370.d.b.d ENSGT00560000077232.A.a.a ENSGT00940000159733.g.b.a.a.a ENSGT00940000158047.l ENSGT00940000156904.a.b.c.a ENSGT00390000005711.a.b Coho salmon MODERN SPECIES 4 ENSOKIG00005025072 glipr2l (ENSOKIG00005025079) ENSOKIG00005025122 TBRG4 (ENSOKIG00005025143) pomgnt2 (ENSOKIG00005025268) GASK1A (ENSOKIG00005025288) entpd3 (ENSOKIG00005025311) ddc (ENSOKIG00005025414) GRB10 (ENSOKIG00005026074) cobl (ENSOKIG00005028517) ENSOKIG00005028603 ENSOKIG00005028615 CCR8 (ENSOKIG00005028629) ENSOKIG00005028645 ENSOKIG00005028731 ##21 DNAH5 (ENSOKIG00005030427) #22 ENSOKIG00005031297 g6fl (ENSOKIG00005031333) abhd16a (ENSOKIG00005031436) vars1 (ENSOKIG00005031800) ENSOKIG00005034368 ino80e (ENSOKIG00005034387) ENSOKIG00005034394 ENSOKIG00005034409 ENSOKIG00005034451 ENSOKIG00005034464 flot1b (ENSOKIG00005034473) DDR1 (ENSOKIG00005034530) gnl1 (ENSOKIG00005034632) znf384b (ENSOKIG00005034760) dcaf13 (ENSOKIG00005034798) Chinook salmon MODERN SPECIES 22 steap4 (ENSOTSG00005010313) glipr2l (ENSOTSG00005010302) ENSOTSG00005010301 ENSOTSG00005010298 pomgnt2 (ENSOTSG00005010297) GASK1A (ENSOTSG00005010296) entpd3 (ENSOTSG00005010295) ddc (ENSOTSG00005010107) GRB10 (ENSOTSG00005006360) cobl (ENSOTSG00005006347) ENSOTSG00005006341 ENSOTSG00005006340 CCR8 (ENSOTSG00005006338) ENSOTSG00005006317 ENSOTSG00005004852 ##21 DNAH5 (ENSOTSG00005004351) #22 ENSOTSG00005004335 ENSOTSG00005004330 DNAH5 (ENSOTSG00005004292) #22 ENSOTSG00005004275 ENSOTSG00005004270 g6fl (ENSOTSG00005004154) abhd16a (ENSOTSG00005002054) vars1 (ENSOTSG00005000173) ENSOTSG00005000121 ENSOTSG00005000118 ENSOTSG00005000117 ENSOTSG00005000115 flot1b (ENSOTSG00005000108) ENSOTSG00005043664 gnl1 (ENSOTSG00005043646) Huchen MODERN SPECIES 830 cobl (ENSHHUG00000039092) ENSHHUG00000039088 ENSHHUG00000039086 CCR8 (ENSHHUG00000039060) ENSHHUG00000037719 ##21 DNAH5 (ENSHHUG00000037527) #22 ENSHHUG00000037512 ENSHHUG00000037508 ENSHHUG00000037498 g6fl (ENSHHUG00000037496) abhd16a (ENSHHUG00000037486) vars1 (ENSHHUG00000037484) Northern pike MODERN SPECIES 19 steap4 (ENSELUG00000007369) glipr2l (ENSELUG00000007347) ENSELUG00000026489 TBRG4 (ENSELUG00000007298) pomgnt2 (ENSELUG00000007283) GASK1A (ENSELUG00000007274) entpd3 (ENSELUG00000007261) ddc (ENSELUG00000007243) GRB10 (ENSELUG00000007200) cobl (ENSELUG00000007124) ENSELUG00000007028 ENSELUG00000007016 ENSELUG00000024773 CCR8 (ENSELUG00000007000) ENSELUG00000000232 ##21 DNAH5 (ENSELUG00000006849) #22 ENSELUG00000006760 ENSELUG00000006732 g6fl (ENSELUG00000006691) abhd16a (ENSELUG00000006643) vars1 (ENSELUG00000006550) ENSELUG00000006492 ino80e (ENSELUG00000006479) ENSELUG00000006463 ENSELUG00000006452 ENSELUG00000030380 flot1b (ENSELUG00000006370) DDR1 (ENSELUG00000006327) gnl1 (ENSELUG00000006281) znf384b (ENSELUG00000006251) dcaf13 (ENSELUG00000006191) Acanthomorphata ANCESTRAL SPECIES 124 ENSGT00940000166989 ENSGT00940000153704.A.q ENSGT00560000077278.b ENSGT00940000157131.b ENSGT01100000263542.A ENSGT00940000156004 ENSGT00940000155909.o.a ENSGT00530000063608.A ENSGT01020000230359.A ENSGT01020000230359.B.b ENSGT01020000230359.B.a ENSGT00940000166969.b ENSGT00940000154766.a.a #21 ENSGT00390000015121 ENSGT00940000154766.b ##21 ENSGT00940000155533.d #22 ENSGT00940000156424.a ENSGT00940000157811.b.a ENSGT00950000183199.b ENSGT00940000159433 ENSGT00940000160429.h.a ENSGT00940000161198 ENSGT00940000158596.a.a ENSGT00940000179084 ENSGT00940000177739 ENSGT01030000234574.A.a.e.a ENSGT00940000161224 ENSGT00940000159377 ENSGT00530000063877.b.a ENSGT00940000161470.a.a ENSGT00940000155952 Euacanthomorphacea ANCESTRAL SPECIES 71 ENSGT01050000244890.b ENSGT00940000157621 ENSGT00940000158728.l ENSGT00940000166989 ENSGT00940000153704.A.q ENSGT00940000157131.b ENSGT01100000263542.A ENSGT00940000156004 ENSGT00940000155909.o.a ENSGT00530000063608.A ENSGT01020000230359.A ENSGT01020000230359.B.b ENSGT01020000230359.B.a ENSGT00940000166969.b ENSGT00940000154766.b ##21 ENSGT00940000155533.d #22 ENSGT00940000156424.a ENSGT00940000157811.b.a ENSGT00950000183199.b ENSGT00940000159433 ENSGT00940000160429.h.a ENSGT00940000161198 ENSGT00940000158596.a.a ENSGT00940000179084 ENSGT00940000177739 ENSGT01030000234574.A.a.e.a ENSGT00940000161224 ENSGT00940000159377 ENSGT00530000063877.b.a ENSGT00940000161470.a.a ENSGT00940000155952 Pinecone sodierfish MODERN SPECIES 7 eif3ha (ENSMMDG00005023015) CSMD3 (ENSMMDG00005023065) zgc:110410 (ENSMMDG00005023414) ANKIB1 (ENSMMDG00005023419) eomesb (ENSMMDG00005023437) cmc1 (ENSMMDG00005023465) azi2 (ENSMMDG00005023467) rbms3 (ENSMMDG00005023469) entpd3 (ENSMMDG00005023476) ddc (ENSMMDG00005023491) GRB10 (ENSMMDG00005023522) ENSMMDG00005023933 ENSMMDG00005023935 CCR8 (ENSMMDG00005023940) ENSMMDG00005023954 ##21 DNAH5 (ENSMMDG00005023978) #22 ADCY2 (ENSMMDG00005024018) ENSMMDG00005024084 ENSMMDG00005024091 ENSMMDG00005024094 ENSMMDG00005024095 ADAMTS16 (ENSMMDG00005024097) irx1a (ENSMMDG00005024099) irx2a (ENSMMDG00005024101) irx4a (ENSMMDG00005024102) LPCAT1 (ENSMMDG00005024104) slc6a3 (ENSMMDG00005024105) DCDC2 (ENSMMDG00005024107) nrsn1 (ENSMMDG00005024108) ENSMMDG00005001206 ENSMMDG00005001972 Percomorphaceae ANCESTRAL SPECIES ENSGT01050000244890.b ENSGT00940000157621 ENSGT00940000158728.l ENSGT00940000166989 ENSGT00940000153704.A.q ENSGT00940000157131.b ENSGT01100000263542.A ENSGT00940000156004 ENSGT00940000155909.o.a ENSGT00530000063608.A ENSGT01020000230359.A ENSGT01020000230359.B.b ENSGT01020000230359.B.a ENSGT00940000166969.b ENSGT00940000154766.b ##21 ENSGT00940000155533.d #22 ENSGT00940000156424.a ENSGT00940000157811.b.a ENSGT00950000183199.b ENSGT00940000159433 ENSGT00940000160429.h.a ENSGT00940000161198 ENSGT00940000158596.a.a ENSGT00940000179084 ENSGT00940000177739 ENSGT01030000234574.A.a.f ENSGT01030000234574.A.a.e.a ENSGT00940000161224 ENSGT00940000159377 ENSGT00530000063877.b.a ENSGT00940000161470.a.a Tiger tail seahorse MODERN SPECIES 288 ASCC3 (ENSHCOG00000021142) sim1a (ENSHCOG00000021137) cyb5r4 (ENSHCOG00000021131) cep162 (ENSHCOG00000021128) ENSHCOG00000021125 ADGRB1 (ENSHCOG00000021123) enpp2 (ENSHCOG00000021118) taf2 (ENSHCOG00000021114) cndp1 (ENSHCOG00000021112) GRB10 (ENSHCOG00000021109) cobl (ENSHCOG00000021103) CX3CR1 (ENSHCOG00000021098) ENSHCOG00000021096 CCR8 (ENSHCOG00000021093) ENSHCOG00000021087 ##21 DNAH5 (ENSHCOG00000000887) #22 ADCY2 (ENSHCOG00000000902) TENT4A (ENSHCOG00000000915) ENSHCOG00000000919 ADAMTS16 (ENSHCOG00000000925) irx1a (ENSHCOG00000000932) irx2a (ENSHCOG00000000935) irx4a (ENSHCOG00000000938) LPCAT1 (ENSHCOG00000000944) slc6a3 (ENSHCOG00000000952) ENSHCOG00000000960 nrsn1 (ENSHCOG00000000963) Percomorphaceae_B ANCESTRAL SPECIES 1 ENSGT01050000244890.b ENSGT00940000157621 ENSGT00940000158728.l ENSGT00940000166989 ENSGT00940000153704.A.q ENSGT00940000157131.b ENSGT01100000263542.A ENSGT00940000156004 ENSGT00940000155909.o.a ENSGT00530000063608.A ENSGT01020000230359.A ENSGT01020000230359.B.b ENSGT01020000230359.B.a ENSGT00940000166969.b ENSGT00940000154766.b ##21 ENSGT00940000155533.d #22 ENSGT00940000156424.a ENSGT00940000157811.b.a ENSGT00950000183199.b ENSGT00940000159433 ENSGT00940000160429.h.a ENSGT00940000161198 ENSGT00940000158596.a.a ENSGT00940000179084 ENSGT00940000177739 ENSGT01030000234574.A.a.e.a ENSGT00940000161224 ENSGT00940000159377 ENSGT00530000063877.b.a ENSGT01060000248575.D.c.b.a.b.a ENSGT00940000161470.a.a Ovalentaria ANCESTRAL SPECIES 3 ENSGT01050000244890.b ENSGT00940000157621 ENSGT00940000158728.l ENSGT00940000166989 ENSGT00940000153704.A.q ENSGT00940000157131.b ENSGT01100000263542.A ENSGT00940000156004 ENSGT00940000155909.o.a ENSGT00530000063608.A ENSGT01020000230359.A ENSGT01020000230359.B.b ENSGT01020000230359.B.a ENSGT00940000166969.b ENSGT00940000154766.b ##21 ENSGT00940000155533.d #22 ENSGT00940000156424.a ENSGT00940000157811.b.a ENSGT00950000183199.b ENSGT00940000159433 ENSGT00940000160429.h.a ENSGT00940000161198 ENSGT00940000158596.a.a ENSGT00940000177739 ENSGT01030000234574.A.a.f ENSGT01030000234574.A.a.e.a ENSGT00940000161224 ENSGT00940000159377 ENSGT00530000063877.b.a ENSGT01060000248575.D.c.b.a.b.a ENSGT00940000161470.a.a Atherinomorphae ANCESTRAL SPECIES ENSGT00940000155549.a.b ENSGT01050000244890.b ENSGT00940000157621 ENSGT00940000158728.l ENSGT00940000166989 ENSGT00940000153704.A.q ENSGT00940000157131.b ENSGT01100000263542.A ENSGT00940000156004 ENSGT00940000155909.o.a ENSGT00530000063608.A ENSGT01020000230359.A ENSGT01020000230359.B.b ENSGT01020000230359.B.a ENSGT00940000154766.b ##21 ENSGT00940000155533.d #22 ENSGT00940000156424.a ENSGT00940000157811.b.a ENSGT00950000183199.b ENSGT00940000159433 ENSGT00940000160429.h.a ENSGT00940000161198 ENSGT00940000158596.a.a ENSGT01030000234574.A.a.e.a ENSGT00940000161224 ENSGT00940000159377 ENSGT00530000063877.b.a ENSGT00940000161470.a.a ENSGT00940000155952 ENSGT00940000155115.a.a.a.b ENSGT01030000234564.a.a.a.a.a Cyprinodontiformes ANCESTRAL SPECIES ENSGT00940000155549.a.b ENSGT01050000244890.b ENSGT00940000157621 ENSGT00940000158728.l ENSGT00940000166989 ENSGT00940000153704.A.q ENSGT00940000157131.b ENSGT01100000263542.A ENSGT00940000156004 ENSGT00940000155909.o.a ENSGT00530000063608.A ENSGT01020000230359.A ENSGT01020000230359.B.b ENSGT01020000230359.B.a ENSGT00940000154766.b ##21 ENSGT00940000155533.d #22 ENSGT00940000156424.a ENSGT00940000157811.b.a ENSGT00950000183199.b ENSGT00940000159433 ENSGT00940000160429.h.a ENSGT00940000161198 ENSGT00940000158596.a.a ENSGT01030000234574.A.a.e.a ENSGT00940000161224 ENSGT00940000159377 ENSGT00530000063877.b.a ENSGT00940000161470.a.a ENSGT00940000155952 ENSGT00940000155115.a.a.a.b ENSGT01030000234564.a.a.a.a.a Aplocheiloidei ANCESTRAL SPECIES 26 ENSGT01050000244890.b ENSGT00940000157621 ENSGT00940000158728.l ENSGT00940000166989 ENSGT00940000153704.A.q ENSGT00940000157131.b ENSGT01100000263542.A ENSGT00940000156004 ENSGT00940000155909.o.a ENSGT00530000063608.A ENSGT01020000230359.A ENSGT01020000230359.B.b ENSGT01020000230359.B.a ENSGT00940000166969.b ENSGT00940000154766.b ##21 ENSGT00940000155533.d #22 ENSGT00940000156424.a ENSGT00940000157811.b.a ENSGT00950000183199.b ENSGT00940000159433 ENSGT00940000160429.h.a ENSGT00940000161198 ENSGT00940000158596.a.a ENSGT01030000234574.A.a.e.a ENSGT00940000161224 ENSGT00940000159377 ENSGT00530000063877.b.a ENSGT00940000161470.a.a ENSGT00940000155952 ENSGT00940000155115.a.a.a.b ENSGT01030000234564.a.a.a.a.a Mangrove rivulus MODERN SPECIES 14 CSMD3 (ENSKMAG00000020709) ANKIB1 (ENSKMAG00000020607) eomesb (ENSKMAG00000020587) cmc1 (ENSKMAG00000020538) azi2 (ENSKMAG00000020524) rbms3 (ENSKMAG00000020500) entpd3 (ENSKMAG00000020472) ddc (ENSKMAG00000020433) GRB10 (ENSKMAG00000020363) ENSKMAG00000020324 ENSKMAG00000020309 CCR8 (ENSKMAG00000020303) CCR8 (ENSKMAG00000020291) ENSKMAG00000020257 ENSKMAG00000020157 ##21 DNAH5 (ENSKMAG00000020011) #22 ADCY2 (ENSKMAG00000019954) TENT4A (ENSKMAG00000019925) ENSKMAG00000019901 ADAMTS16 (ENSKMAG00000019844) irx1a (ENSKMAG00000019814) irx2a (ENSKMAG00000019798) irx4a (ENSKMAG00000019771) LPCAT1 (ENSKMAG00000019716) slc6a3 (ENSKMAG00000019572) DCDC2 (ENSKMAG00000019506) nrsn1 (ENSKMAG00000019486) ENSKMAG00000019476 sox4b (ENSKMAG00000019466) CDKAL1 (ENSKMAG00000019441) ENSKMAG00000019420 Turquoise killifish MODERN SPECIES 1614 ANKIB1 (ENSNFUG00015004644) eomesb (ENSNFUG00015004672) CMC1 (ENSNFUG00015004826) azi2 (ENSNFUG00015004843) rbms3 (ENSNFUG00015004881) ENSNFUG00015004976 ENSNFUG00015004981 ENTPD3 (ENSNFUG00015004988) DDC (ENSNFUG00015005032) GRB10 (ENSNFUG00015005208) COBL (ENSNFUG00015005488) ENSNFUG00015005522 ENSNFUG00015005530 CCR8 (ENSNFUG00015005539) ENSNFUG00015005565 ##21 DNAH5 (ENSNFUG00015005683) #22 ENSNFUG00015005785 ADCY2A (ENSNFUG00015005842) ENSNFUG00015006212 PAPD7 (ENSNFUG00015006218) ENSNFUG00015006233 ADAMTS16 (ENSNFUG00015006275) ENSNFUG00015006439 IRX1A (ENSNFUG00015006443) ENSNFUG00015006449 irx2a (ENSNFUG00015006457) ENSNFUG00015006474 ENSNFUG00015006478 ENSNFUG00015006482 irx4a (ENSNFUG00015006485) ENSNFUG00015006495 Cyprinodontoidei ANCESTRAL SPECIES ENSGT00940000155549.a.b ENSGT01050000244890.b ENSGT00940000157621 ENSGT00940000158728.l ENSGT00940000166989 ENSGT00940000153704.A.q ENSGT00940000157131.b ENSGT01100000263542.A ENSGT00940000156004 ENSGT00940000155909.o.a ENSGT00530000063608.A ENSGT01020000230359.A ENSGT01020000230359.B.b ENSGT01020000230359.B.a ENSGT00940000154766.b ##21 ENSGT00940000155533.d #22 ENSGT00940000156424.a ENSGT00940000157811.b.a ENSGT00950000183199.b ENSGT00940000159433 ENSGT00940000160429.h.a ENSGT00940000161198 ENSGT00940000158596.a.a ENSGT01030000234574.A.a.e.a ENSGT00940000161224 ENSGT00940000159377 ENSGT00530000063877.b.a ENSGT00940000161470.a.a ENSGT00940000155952 ENSGT00940000155115.a.a.a.b ENSGT01030000234564.a.a.a.a.a Poeciliinae ANCESTRAL SPECIES 22 ENSGT01050000244890.b ENSGT00940000157621 ENSGT00940000158728.l ENSGT00940000166989 ENSGT00940000153704.A.q ENSGT00940000157131.b ENSGT01100000263542.A ENSGT00940000156004 ENSGT00940000155909.o.a ENSGT00530000063608.A ENSGT01020000230359.A ENSGT01020000230359.B.b ENSGT01020000230359.B.a ENSGT00940000166969.b ENSGT00940000154766.b ##21 ENSGT00940000155533.d #22 ENSGT00940000156424.a ENSGT00940000157811.b.a ENSGT00950000183199.b ENSGT00940000159433 ENSGT00940000160429.h.a ENSGT00940000161198 ENSGT00940000158596.a.a ENSGT01030000234574.A.a.e.a ENSGT00940000161224 ENSGT00940000159377 ENSGT00530000063877.b.a ENSGT00940000161470.a.a ENSGT00940000155952 ENSGT00940000155115.a.a.a.b ENSGT01030000234564.a.a.a.a.a Poecilia ANCESTRAL SPECIES ENSGT01050000244890.b ENSGT00940000157621 ENSGT00940000158728.l ENSGT00940000166989 ENSGT00940000153704.A.q ENSGT00940000157131.b ENSGT01100000263542.A ENSGT00940000156004 ENSGT00940000155909.o.a ENSGT00530000063608.A ENSGT01020000230359.A ENSGT01020000230359.B.b ENSGT01020000230359.B.a ENSGT00940000166969.b ENSGT00940000154766.b ##21 ENSGT00940000155533.d #22 ENSGT00940000156424.a ENSGT00940000157811.b.a ENSGT00950000183199.b ENSGT00940000159433 ENSGT00940000160429.h.a ENSGT00940000161198 ENSGT00940000158596.a.a ENSGT01030000234574.A.a.e.a ENSGT00940000161224 ENSGT00940000159377 ENSGT00530000063877.b.a ENSGT00940000161470.a.a ENSGT00940000155952 ENSGT00940000155115.a.a.a.b ENSGT01030000234564.a.a.a.a.a NAME_6 ANCESTRAL SPECIES 117 ENSGT01050000244890.b ENSGT00940000157621 ENSGT00940000158728.l ENSGT00940000166989 ENSGT00940000153704.A.q ENSGT00940000157131.b ENSGT01100000263542.A ENSGT00940000156004 ENSGT00940000155909.o.a ENSGT00530000063608.A ENSGT01020000230359.A ENSGT01020000230359.B.b ENSGT01020000230359.B.a ENSGT00940000166969.b ENSGT00940000154766.b ##21 ENSGT00940000155533.d #22 ENSGT00940000156424.a ENSGT00940000157811.b.a ENSGT00950000183199.b ENSGT00940000159433 ENSGT00940000160429.h.a ENSGT00940000161198 ENSGT00940000158596.a.a ENSGT01030000234574.A.a.e.a ENSGT00940000161224 ENSGT00940000159377 ENSGT00530000063877.b.a ENSGT00940000161470.a.a ENSGT00940000155952 ENSGT00940000155115.a.a.a.b ENSGT01030000234564.a.a.a.a.a Amazon molly MODERN SPECIES 252 CSMD3 (ENSPFOG00000018059) zgc:110410 (ENSPFOG00000018007) ANKIB1 (ENSPFOG00000017957) eomesb (ENSPFOG00000017938) cmc1 (ENSPFOG00000017932) azi2 (ENSPFOG00000017923) rbms3 (ENSPFOG00000017887) entpd3 (ENSPFOG00000017854) ddc (ENSPFOG00000017822) GRB10 (ENSPFOG00000017779) cobl (ENSPFOG00000017759) ENSPFOG00000017756 CCR8 (ENSPFOG00000017755) CCR8 (ENSPFOG00000020862) ENSPFOG00000017405 ##21 DNAH5 (ENSPFOG00000016948) #22 ADCY2 (ENSPFOG00000016794) TENT4A (ENSPFOG00000016762) ENSPFOG00000016745 ADAMTS16 (ENSPFOG00000016644) irx1a (ENSPFOG00000016622) irx2a (ENSPFOG00000016596) irx4a (ENSPFOG00000016581) ENSPFOG00000016580 LPCAT1 (ENSPFOG00000016509) slc6a3 (ENSPFOG00000016403) DCDC2 (ENSPFOG00000023870) nrsn1 (ENSPFOG00000016379) sox4b (ENSPFOG00000016372) CDKAL1 (ENSPFOG00000016282) E2F3 (ENSPFOG00000016235) Sailfin molly MODERN SPECIES 21 rbms3 (ENSPLAG00000016866) entpd3 (ENSPLAG00000016956) ddc (ENSPLAG00000016979) GRB10 (ENSPLAG00000017017) cobl (ENSPLAG00000017030) ENSPLAG00000017047 ENSPLAG00000017065 ENSPLAG00000017074 CCR8 (ENSPLAG00000017078) ENSPLAG00000017100 ENSPLAG00000017222 ##21 DNAH5 (ENSPLAG00000017597) #22 ADCY2 (ENSPLAG00000017694) INPP4B (ENSPLAG00000017754) Guppy MODERN SPECIES 446 ANKIB1 (ENSPREG00000012074) eomesb (ENSPREG00000012055) ENSPREG00000012043 cmc1 (ENSPREG00000012028) azi2 (ENSPREG00000012001) ENSPREG00000011985 rbms3 (ENSPREG00000011880) entpd3 (ENSPREG00000011705) ddc (ENSPREG00000011646) GRB10 (ENSPREG00000011626) cobl (ENSPREG00000011603) ENSPREG00000011591 ENSPREG00000011565 CCR8 (ENSPREG00000011557) ENSPREG00000011453 ##21 DNAH5 (ENSPREG00000011353) #22 ADCY2 (ENSPREG00000011307) TENT4A (ENSPREG00000011257) ENSPREG00000011244 ENSPREG00000011224 ADAMTS16 (ENSPREG00000011180) ENSPREG00000011164 irx1a (ENSPREG00000011131) irx2a (ENSPREG00000011115) irx4a (ENSPREG00000011089) LPCAT1 (ENSPREG00000011063) slc6a3 (ENSPREG00000011037) DCDC2 (ENSPREG00000011016) nrsn1 (ENSPREG00000010983) sox4b (ENSPREG00000010954) CDKAL1 (ENSPREG00000010873) Platyfish MODERN SPECIES 17 CSMD3 (ENSXMAG00000014146) zgc:110410 (ENSXMAG00000014259) ANKIB1 (ENSXMAG00000014263) eomesb (ENSXMAG00000014284) cmc1 (ENSXMAG00000014309) azi2 (ENSXMAG00000014311) rbms3 (ENSXMAG00000021783) entpd3 (ENSXMAG00000000746) ddc (ENSXMAG00000000755) GRB10 (ENSXMAG00000000791) cobl (ENSXMAG00000025699) ENSXMAG00000020910 ENSXMAG00000025402 CCR8 (ENSXMAG00000000814) ENSXMAG00000000815 ##21 DNAH5 (ENSXMAG00000000884) #22 ADCY2 (ENSXMAG00000000886) TENT4A (ENSXMAG00000026228) ENSXMAG00000013833 ADAMTS16 (ENSXMAG00000013842) irx1a (ENSXMAG00000022002) irx2a (ENSXMAG00000021240) irx4a (ENSXMAG00000005284) slc6a3 (ENSXMAG00000022758) ENSXMAG00000005263 nrsn1 (ENSXMAG00000005256) ENSXMAG00000009656 ENSXMAG00000023721 CDKAL1 (ENSXMAG00000009663) E2F3 (ENSXMAG00000021029) mboat1 (ENSXMAG00000009682) NAME_4 ANCESTRAL SPECIES 179 ENSGT00940000155549.a.b ENSGT01050000244890.b ENSGT00940000157621 ENSGT00940000158728.l ENSGT00940000166989 ENSGT00940000153704.A.q ENSGT00940000157131.b ENSGT01100000263542.A ENSGT00940000156004 ENSGT00940000155909.o.a ENSGT00530000063608.A ENSGT01020000230359.A ENSGT01020000230359.B.b ENSGT01020000230359.B.a ENSGT00940000154766.b ##21 ENSGT00940000155533.d #22 ENSGT00940000156424.a ENSGT00940000157811.b.a ENSGT00950000183199.b ENSGT00940000159433 ENSGT00940000160429.h.a ENSGT00940000161198 ENSGT00940000158596.a.a ENSGT01030000234574.A.a.e.a ENSGT00940000161224 ENSGT00940000159377 ENSGT00530000063877.b.a Sheepshead minnow DUPLICATION Sheepshead minnow MODERN SPECIES 117 DNAH5 (ENSCVAG00000000479) #22 ddx21 (ENSCVAG00000018333) ENSCVAG00000018421 CSMD1 (ENSCVAG00000018638) ENSCVAG00000019232 rnaset2 (ENSCVAG00000019247) ENSCVAG00000019362 immp1l (ENSCVAG00000019383) elp4 (ENSCVAG00000019394) pax6b (ENSCVAG00000000505) RCN1 (ENSCVAG00000019506) wt1b (ENSCVAG00000019529) eif3m (ENSCVAG00000019573) prrg4 (ENSCVAG00000019583) QSER1 (ENSCVAG00000019657) depdc7a (ENSCVAG00000019668) Sheepshead minnow MODERN SPECIES 211 ENSCVAG00000007715 ENSCVAG00000007725 ENSCVAG00000007733 ENSCVAG00000007737 ENSCVAG00000007793 ENSCVAG00000007799 ENSCVAG00000007806 ENSCVAG00000007827 ENSCVAG00000007898 ENSCVAG00000007906 ENSCVAG00000007919 ENSCVAG00000007929 CCN3 (ENSCVAG00000007933) scgn (ENSCVAG00000008001) CARMIL1 (ENSCVAG00000008107) ENSCVAG00000008140 #22 ADCY2 (ENSCVAG00000008423) TENT4A (ENSCVAG00000008463) ENSCVAG00000008487 ADAMTS16 (ENSCVAG00000008587) irx1a (ENSCVAG00000008606) irx2a (ENSCVAG00000008630) Mummichog MODERN SPECIES 2213 CSMD3 (ENSFHEG00000004409) zgc:110410 (ENSFHEG00000004490) ANKIB1 (ENSFHEG00000004570) eomesb (ENSFHEG00000004590) cmc1 (ENSFHEG00000004600) azi2 (ENSFHEG00000004614) rbms3 (ENSFHEG00000004787) entpd3 (ENSFHEG00000004810) ddc (ENSFHEG00000004850) GRB10 (ENSFHEG00000004890) cobl (ENSFHEG00000004950) ENSFHEG00000004960 CCR8 (ENSFHEG00000004985) CCR8 (ENSFHEG00000004989) ENSFHEG00000005122 ##21 DNAH5 (ENSFHEG00000005963) #22 ADCY2 (ENSFHEG00000006074) TENT4A (ENSFHEG00000006086) ENSFHEG00000006100 ADAMTS16 (ENSFHEG00000000773) irx1a (ENSFHEG00000006196) irx2a (ENSFHEG00000006215) Oryzias DUPLICATION Oryzias ANCESTRAL SPECIES ENSGT00940000155533.d.q #22 Oryzias_b ANCESTRAL SPECIES ENSGT00940000155533.d.q #22 Indian medaka MODERN SPECIES 23 DNAJC5 (ENSOMEG00000000662) trim101 (ENSOMEG00000015285) efhd2 (ENSOMEG00000000949) tpd52l2b (ENSOMEG00000015371) ppdpfb (ENSOMEG00000015394) ptk6b (ENSOMEG00000015610) ENSOMEG00000015663 IQSEC2 (ENSOMEG00000015738) ENSOMEG00000015763 ENSOMEG00000015772 ENSOMEG00000015787 ENSOMEG00000015804 edem2 (ENSOMEG00000015851) ENSOMEG00000015892 ENSOMEG00000015914 #22 DNAH5 (ENSOMEG00000016006) #22 ENSOMEG00000016071 snx21 (ENSOMEG00000016098) dnase1l1 (ENSOMEG00000016136) hm13 (ENSOMEG00000016232) mrgbp (ENSOMEG00000016272) SULF2 (ENSOMEG00000016431) ENSOMEG00000016460 ugt5e1 (ENSOMEG00000016471) pfkfb1 (ENSOMEG00000016573) ENSOMEG00000016640 gdi1 (ENSOMEG00000016690) atp6ap1b (ENSOMEG00000016723) taf8 (ENSOMEG00000016765) camk1gb (ENSOMEG00000016801) ENSOMEG00000016818 Javanese ricefish MODERN SPECIES 4 MIPEP (ENSOJAG00000008477) BRWD1 (ENSOJAG00000005641) get1 (ENSOJAG00000005524) ENSOJAG00000005391 ENSOJAG00000005335 ENSOJAG00000005300 ENSOJAG00000005281 ENSOJAG00000005064 zgc:113279 (ENSOJAG00000005033) ENSOJAG00000005023 PHLDB1 (ENSOJAG00000004899) ENSOJAG00000004799 ENSOJAG00000004779 ENSOJAG00000004767 ENSOJAG00000004761 ENSOJAG00000004569 #22 wsb1 (ENSOJAG00000004292) pipox (ENSOJAG00000004235) ENSOJAG00000004215 PHF12 (ENSOJAG00000004195) ENSOJAG00000004174 ENSOJAG00000004151 dhrs13b.1 (ENSOJAG00000004125) dhrs13a.3 (ENSOJAG00000003860) ENSOJAG00000003761 lhx1a (ENSOJAG00000003722) ENSOJAG00000003693 bcas3 (ENSOJAG00000003258) tbx2b (ENSOJAG00000003203) tbx4 (ENSOJAG00000003115) brip1 (ENSOJAG00000003067) Oryzias ANCESTRAL SPECIES ENSGT00940000155533.d.r #22 Oryzias_a ANCESTRAL SPECIES 1 ENSGT00950000183093.A.a ENSGT00810000125439.B.c.b ENSGT00390000013052 ENSGT00530000063868.b ENSGT00940000158792 ENSGT00940000158636 ENSGT00940000170627 ENSGT00940000157529.i.a ENSGT00390000016228.a.b ENSGT00390000013995.b.b.k.b ENSGT00940000156242.c.a ENSGT00950000183062.a.a.b.b.b ENSGT00940000155915.a ENSGT00940000155419.c.a ENSGT00940000154738.a.q ENSGT00940000155533.d.r #22 ENSGT00940000155504.k.a ENSGT00940000154709.a.b.b.c ENSGT00950000182926.a ENSGT01030000234588.b.b.b.a.a.a.a ENSGT01030000234588.b.b.b.a.b ENSGT01030000234588.b.b.b.a.a.b.b ENSGT00940000159018.d ENSGT00390000007427 ENSGT00390000000068.a.b ENSGT00940000158576.a.b ENSGT00940000164299.b.b ENSGT00390000004933.k.b ENSGT00940000154098.a.e ENSGT00940000153525.i.b ENSGT00390000014507.a.a Japanese Medaka HdrR MODERN SPECIES 20 ADAMTS20 (ENSORLG00000003194) ENSORLG00000027602 prickle1a (ENSORLG00000003229) PPHLN1 (ENSORLG00000003241) YAF2 (ENSORLG00000003255) ENSORLG00000023834 ENSORLG00000022854 ENSORLG00000026898 ENSORLG00000024063 ENSORLG00000025720 GXYLT1 (ENSORLG00000003267) PDZRN4 (ENSORLG00000003283) CNTN1 (ENSORLG00000003308) ENSORLG00000003354 ENSORLG00000003382 DNAH5 (ENSORLG00000003542) #22 dnm1l (ENSORLG00000003624) tnnt2d (ENSORLG00000003649) bpgm (ENSORLG00000003667) ENSORLG00000003676 ENSORLG00000003693 tnni4a (ENSORLG00000030419) ENSORLG00000029963 zgc:136858 (ENSORLG00000003706) CNOT4 (ENSORLG00000003727) ENSORLG00000003735 ENSORLG00000003738 ENSORLG00000003741 pthlhb (ENSORLG00000025229) tmpob (ENSORLG00000003751) ldhbb (ENSORLG00000022136) Chinese medaka MODERN SPECIES 766 NUAK1 (ENSOSIG00000023273) ENSOSIG00000023267 NELL2 (ENSOSIG00000023255) TMEM117 (ENSOSIG00000023243) twf1a (ENSOSIG00000023236) irak4 (ENSOSIG00000023217) ADAMTS20 (ENSOSIG00000023063) ENSOSIG00000022964 prickle1a (ENSOSIG00000022962) PPHLN1 (ENSOSIG00000022959) YAF2 (ENSOSIG00000022954) GXYLT1 (ENSOSIG00000022950) CNTN1 (ENSOSIG00000022126) NRCAM (ENSOSIG00000017271) ENSOSIG00000016760 DNAH5 (ENSOSIG00000016749) #22 ENSOSIG00000016741 tnnt2d (ENSOSIG00000016739) ENSOSIG00000016735 ENSOSIG00000016734 ENSOSIG00000016731 tnni4a (ENSOSIG00000016730) ENSOSIG00000016725 zgc:136858 (ENSOSIG00000016721) CNOT4 (ENSOSIG00000016695) KCNA1 (ENSOSIG00000016691) ENSOSIG00000016690 pthlhb (ENSOSIG00000016689) tmpob (ENSOSIG00000016688) ldhbb (ENSOSIG00000016681) slc35b4 (ENSOSIG00000016673) Oryzias_b ANCESTRAL SPECIES ENSGT00940000155533.d.r #22 Indian medaka MODERN SPECIES 23 ENSOMEG00000015241 DNAJC5 (ENSOMEG00000000662) trim101 (ENSOMEG00000015285) efhd2 (ENSOMEG00000000949) tpd52l2b (ENSOMEG00000015371) ppdpfb (ENSOMEG00000015394) ptk6b (ENSOMEG00000015610) ENSOMEG00000015663 IQSEC2 (ENSOMEG00000015738) ENSOMEG00000015763 ENSOMEG00000015772 ENSOMEG00000015787 ENSOMEG00000015804 edem2 (ENSOMEG00000015851) ENSOMEG00000015892 ENSOMEG00000015914 #22 DNAH5 (ENSOMEG00000016006) #22 ENSOMEG00000016071 snx21 (ENSOMEG00000016098) dnase1l1 (ENSOMEG00000016136) hm13 (ENSOMEG00000016232) mrgbp (ENSOMEG00000016272) SULF2 (ENSOMEG00000016431) ENSOMEG00000016460 ugt5e1 (ENSOMEG00000016471) pfkfb1 (ENSOMEG00000016573) ENSOMEG00000016640 gdi1 (ENSOMEG00000016690) atp6ap1b (ENSOMEG00000016723) taf8 (ENSOMEG00000016765) camk1gb (ENSOMEG00000016801) Ovalentaria_B ANCESTRAL SPECIES 1 ENSGT01050000244890.b ENSGT00940000157621 ENSGT00940000158728.l ENSGT00940000166989 ENSGT00940000153704.A.q ENSGT00940000157131.b ENSGT01100000263542.A ENSGT00940000156004 ENSGT00940000155909.o.a ENSGT00530000063608.A ENSGT01020000230359.A ENSGT01020000230359.B.b ENSGT01020000230359.B.a ENSGT00940000166969.b ENSGT00940000154766.b ##21 ENSGT00940000155533.d #22 ENSGT00940000156424.a ENSGT00940000157811.b.a ENSGT00950000183199.b ENSGT00940000159433 ENSGT00940000160429.h.a ENSGT00940000161198 ENSGT00940000158596.a.a ENSGT00940000177739 ENSGT01030000234574.A.a.f ENSGT01030000234574.A.a.e.a ENSGT00940000161224 ENSGT00940000159377 ENSGT00530000063877.b.a ENSGT01060000248575.D.c.b.a.b.a ENSGT00940000161470.a.a Pomacentridae ANCESTRAL SPECIES 23 ENSGT00940000155549.a.b ENSGT01050000244890.b ENSGT00940000157621 ENSGT00940000158728.l ENSGT00940000166989 ENSGT00940000153704.A.q ENSGT00940000157131.b ENSGT01100000263542.A ENSGT00940000156004 ENSGT00940000155909.o.a ENSGT00530000063608.A ENSGT01020000230359.A ENSGT01020000230359.B.b ENSGT01020000230359.B.a ENSGT00940000154766.b ##21 ENSGT00940000155533.d #22 ENSGT00940000156424.a ENSGT00940000157811.b.a ENSGT00950000183199.b ENSGT00940000159433 ENSGT00940000160429.h.a ENSGT00940000161198 ENSGT00940000158596.a.a ENSGT00940000177739 ENSGT01030000234574.A.a.f ENSGT01030000234574.A.a.e.a ENSGT00940000161224 ENSGT00940000159377 ENSGT00530000063877.b.a ENSGT01060000248575.D.c.b.a.b.a ENSGT00940000161470.a.a Pomacentridae_A ANCESTRAL SPECIES 6 ENSGT00940000155549.a.b ENSGT01050000244890.b ENSGT00940000157621 ENSGT00940000158728.l ENSGT00940000166989 ENSGT00940000153704.A.q ENSGT00940000157131.b ENSGT01100000263542.A ENSGT00940000156004 ENSGT00940000155909.o.a ENSGT00530000063608.A ENSGT01020000230359.A ENSGT01020000230359.B.b ENSGT01020000230359.B.a ENSGT00940000154766.b ##21 ENSGT00940000155533.d #22 ENSGT00940000156424.a ENSGT00940000157811.b.a ENSGT00950000183199.b ENSGT00940000159433 ENSGT00940000160429.h.a ENSGT00940000161198 ENSGT00940000158596.a.a ENSGT01030000234574.A.a.e.a ENSGT00940000161224 ENSGT00940000159377 ENSGT00530000063877.b.a ENSGT01060000248575.D.c.b.a.b.a ENSGT00940000161470.a.a ENSGT00940000155952 ENSGT00940000155115.a.a.a.b Amphiprion ANCESTRAL SPECIES 54 ENSGT00940000155549.a.b ENSGT01050000244890.b ENSGT00940000157621 ENSGT00940000158728.l ENSGT00940000166989 ENSGT00940000153704.A.q ENSGT00940000157131.b ENSGT01100000263542.A ENSGT00940000156004 ENSGT00940000155909.o.a ENSGT00530000063608.A ENSGT01020000230359.A ENSGT01020000230359.B.b ENSGT01020000230359.B.a ENSGT00940000154766.b ##21 ENSGT00940000155533.d #22 ENSGT00940000156424.a ENSGT00940000157811.b.a ENSGT00950000183199.b ENSGT00940000159433 ENSGT00940000160429.h.a ENSGT00940000161198 ENSGT00940000158596.a.a ENSGT01030000234574.A.a.e.a ENSGT00940000161224 ENSGT00940000159377 ENSGT00530000063877.b.a ENSGT01060000248575.D.c.b.a.b.a ENSGT00940000161470.a.a ENSGT00940000155952 ENSGT00940000155115.a.a.a.b Clown anemonefish MODERN SPECIES 1360 ddc (ENSAOCG00000002147) GRB10 (ENSAOCG00000012855) cobl (ENSAOCG00000002209) ENSAOCG00000012993 ENSAOCG00000013002 CCR8 (ENSAOCG00000013010) ENSAOCG00000013177 ##21 DNAH5 (ENSAOCG00000013443) #22 ADCY2 (ENSAOCG00000013485) TENT4A (ENSAOCG00000013501) ENSAOCG00000013520 ADAMTS16 (ENSAOCG00000000852) Orange clownfish MODERN SPECIES 21 CSMD3 (ENSAPEG00000016613) zgc:110410 (ENSAPEG00000016550) ANKIB1 (ENSAPEG00000016448) eomesb (ENSAPEG00000016400) cmc1 (ENSAPEG00000016367) azi2 (ENSAPEG00000016346) rbms3 (ENSAPEG00000016299) entpd3 (ENSAPEG00000016291) ddc (ENSAPEG00000016234) GRB10 (ENSAPEG00000016152) cobl (ENSAPEG00000016068) ENSAPEG00000016049 ENSAPEG00000016039 CCR8 (ENSAPEG00000016031) ENSAPEG00000015798 ##21 DNAH5 (ENSAPEG00000015612) #22 ENSAPEG00000015540 TENT4A (ENSAPEG00000015522) ENSAPEG00000015492 ADAMTS16 (ENSAPEG00000015350) irx1a (ENSAPEG00000015338) irx2a (ENSAPEG00000015314) irx4a (ENSAPEG00000015290) LPCAT1 (ENSAPEG00000015191) slc6a3 (ENSAPEG00000015126) DCDC2 (ENSAPEG00000015093) nrsn1 (ENSAPEG00000015059) ENSAPEG00000014975 sox4b (ENSAPEG00000014937) CDKAL1 (ENSAPEG00000014801) E2F3 (ENSAPEG00000014727) Spiny chromis MODERN SPECIES 1430 DNAH5 (ENSAPOG00000000378) #22 pip4p1b (ENSAPOG00000013554) Bicolor damselfish MODERN SPECIES 2179 DNAH5 (ENSSPAG00000009911) #22 Cichlidae ANCESTRAL SPECIES 26 ENSGT01050000244890.b ENSGT00940000157621 ENSGT00940000158728.l ENSGT00940000166989 ENSGT00940000153704.A.q ENSGT00940000157131.b ENSGT01100000263542.A ENSGT00940000156004 ENSGT00940000155909.o.a ENSGT00530000063608.A ENSGT01020000230359.A ENSGT01020000230359.B.b ENSGT01020000230359.B.a ENSGT00940000166969.b ENSGT00940000154766.b ##21 ENSGT00940000155533.d #22 ENSGT00940000156424.a ENSGT00940000157811.b.a ENSGT00950000183199.b ENSGT00940000159433 ENSGT00940000160429.h.a ENSGT00940000161198 ENSGT00940000158596.a.a ENSGT01030000234574.A.a.e.a ENSGT00940000161224 ENSGT00940000159377 ENSGT00530000063877.b.a ENSGT01060000248575.D.c.b.a.b.a ENSGT00940000161470.a.a ENSGT00940000155952 ENSGT00940000155115.a.a.a.b Pseudocrenilabrinae ANCESTRAL SPECIES 2 ENSGT00940000153704.A.q ENSGT00940000157131.b ENSGT01100000263542.A ENSGT00940000156004 ENSGT00940000155909.o.a ENSGT00530000063608.A ENSGT01020000230359.A.f.b ENSGT01020000230359.A.f.a ENSGT01020000230359.A.e.a.a ENSGT01020000230359.A.e.a.b.b.a ENSGT01020000230359.A.e.a.b.a ENSGT01020000230359.B.b ENSGT01020000230359.B.a ENSGT00940000166969.b ENSGT00940000154766.b ##21 ENSGT00940000155533.d #22 ENSGT00940000156424.a ENSGT00940000157811.b.a ENSGT00950000183199.b ENSGT00940000159433 ENSGT00940000160429.h.a ENSGT00940000161198 ENSGT00940000158596.a.a ENSGT01030000234574.A.a.e.a ENSGT00940000161224 ENSGT00940000159377 ENSGT00530000063877.b.a ENSGT01060000248575.D.c.b.a.b.a ENSGT00940000161470.a.a ENSGT00940000155952 ENSGT00940000155115.a.a.a.b Nile tilapia MODERN SPECIES 2 entpd3 (ENSONIG00000007165) ddc (ENSONIG00000007162) GRB10 (ENSONIG00000007158) cobl (ENSONIG00000007157) ENSONIG00000040604 ENSONIG00000022826 ENSONIG00000007156 ENSONIG00000035016 ENSONIG00000043017 ENSONIG00000027997 ENSONIG00000027766 ENSONIG00000035731 CCR8 (ENSONIG00000029685) ENSONIG00000007147 ##21 ENSONIG00000029926 DNAH5 (ENSONIG00000007143) #22 ENSONIG00000032288 ENSONIG00000037862 ADCY2 (ENSONIG00000007131) ENSONIG00000007130 ENSONIG00000007128 ADAMTS16 (ENSONIG00000007117) irx1a (ENSONIG00000007113) irx2a (ENSONIG00000038017) irx4a (ENSONIG00000036951) LPCAT1 (ENSONIG00000007105) slc6a3 (ENSONIG00000007082) DCDC2 (ENSONIG00000031993) nrsn1 (ENSONIG00000007078) ENSONIG00000007077 ENSONIG00000027348 Pseudocrenilabrinae_A ANCESTRAL SPECIES 1 ENSGT00940000166989 ENSGT00940000153704.A.q ENSGT00940000157131.b ENSGT01100000263542.A ENSGT00940000156004 ENSGT00940000155909.o.a ENSGT00530000063608.A ENSGT01020000230359.A.f.b ENSGT01020000230359.A.f.a ENSGT01020000230359.A.e.a.a ENSGT01020000230359.A.e.b ENSGT01020000230359.B.b ENSGT01020000230359.B.a ENSGT00940000166969.b ENSGT00940000154766.b ##21 ENSGT00940000155533.d #22 ENSGT00940000156424.a ENSGT00940000157811.b.a ENSGT00950000183199.b ENSGT00940000159433 ENSGT00940000160429.h.a ENSGT00940000161198 ENSGT00940000158596.a.a ENSGT01030000234574.A.a.e.a ENSGT00940000161224 ENSGT00940000159377 ENSGT00530000063877.b.a ENSGT01060000248575.D.c.b.a.b.a ENSGT00940000161470.a.a ENSGT00940000155952 ENSGT00940000155115.a.a.a.b Lyretail cichlid MODERN SPECIES 411 entpd3 (ENSNBRG00000008214) ddc (ENSNBRG00000008371) GRB10 (ENSNBRG00000008404) cobl (ENSNBRG00000008452) ENSNBRG00000008507 ENSNBRG00000008521 CX3CR1 (ENSNBRG00000008528) ENSNBRG00000008550 ENSNBRG00000008574 ENSNBRG00000008590 ENSNBRG00000008619 CCR8 (ENSNBRG00000008639) ENSNBRG00000008707 ENSNBRG00000008858 ##21 ENSNBRG00000008924 ##21 DNAH5 (ENSNBRG00000009027) #22 ENSNBRG00000009139 ADCY2 (ENSNBRG00000009156) ENSNBRG00000009218 ENSNBRG00000009248 ADAMTS16 (ENSNBRG00000009277) irx1a (ENSNBRG00000009359) irx2a (ENSNBRG00000009422) irx4a (ENSNBRG00000009447) LPCAT1 (ENSNBRG00000009465) slc6a3 (ENSNBRG00000009507) DCDC2 (ENSNBRG00000009546) nrsn1 (ENSNBRG00000009557) sox4b (ENSNBRG00000009576) Haplochromini ANCESTRAL SPECIES 24 ENSGT00940000157131.b ENSGT01100000263542.A ENSGT00940000156004 ENSGT00940000155909.o.a ENSGT00530000063608.A ENSGT01020000230359.A.f.b ENSGT01020000230359.A.f.a ENSGT01020000230359.A.e.a.a ENSGT01020000230359.A.e.a.b.b.b ENSGT01020000230359.A.e.a.b.a ENSGT01020000230359.A.e.b ENSGT01020000230359.B.b ENSGT01020000230359.B.a ENSGT00940000166969.b ENSGT00940000154766.b ##21 ENSGT00940000155533.d #22 ENSGT00940000156424.a ENSGT00940000157811.b.a ENSGT00950000183199.b ENSGT00940000159433 ENSGT00940000160429.h.a ENSGT00940000161198 ENSGT00940000158596.a.a ENSGT01030000234574.A.a.e.a ENSGT00940000161224 ENSGT00940000159377 ENSGT00530000063877.b.a ENSGT01060000248575.D.c.b.a.b.a ENSGT00940000161470.a.a ENSGT00940000155952 ENSGT00940000155115.a.a.a.b Burton s mouthbrooder MODERN SPECIES 465 ENSHBUG00000005868 CCR8 (ENSHBUG00000005857) ENSHBUG00000005837 ##21 DNAH5 (ENSHBUG00000005677) #22 ADCY2 (ENSHBUG00000005498) ENSHBUG00000001038 ENSHBUG00000005427 ADAMTS16 (ENSHBUG00000005402) irx1a (ENSHBUG00000005321) irx2a (ENSHBUG00000000945) irx4a (ENSHBUG00000005281) LPCAT1 (ENSHBUG00000005255) slc6a3 (ENSHBUG00000005189) ENSHBUG00000005117 nrsn1 (ENSHBUG00000005109) Haplochromini_A ANCESTRAL SPECIES 30 ENSGT00940000157131.b ENSGT01100000263542.A ENSGT00940000156004 ENSGT00940000155909.o.a ENSGT00530000063608.A ENSGT01020000230359.A.f.b ENSGT01020000230359.A.f.a ENSGT01020000230359.A.e.a.a.a ENSGT01020000230359.A.e.a.b.b.b ENSGT01020000230359.A.e.a.b.a ENSGT01020000230359.A.e.b ENSGT01020000230359.B.b ENSGT01020000230359.B.a ENSGT00940000166969.b ENSGT00940000154766.b ##21 ENSGT00940000155533.d #22 ENSGT00940000156424.a ENSGT00940000157811.b.a ENSGT00950000183199.b ENSGT00940000159433 ENSGT00940000160429.h.a ENSGT00940000161198 ENSGT00940000158596.a.a ENSGT01030000234574.A.a.e.a ENSGT00940000161224 ENSGT00940000159377 ENSGT00530000063877.b.a ENSGT01060000248575.D.c.b.a.b.a ENSGT00940000161470.a.a ENSGT00940000155952 ENSGT00940000155115.a.a.a.b P. nyererei MODERN SPECIES 423 ddc (ENSPNYG00000010436) GRB10 (ENSPNYG00000010381) cobl (ENSPNYG00000010331) ENSPNYG00000010296 ENSPNYG00000010284 ENSPNYG00000010274 ENSPNYG00000010269 ENSPNYG00000010255 ENSPNYG00000010232 CX3CR1 (ENSPNYG00000010213) ENSPNYG00000010179 ENSPNYG00000010158 CCR8 (ENSPNYG00000010149) ENSPNYG00000009987 ENSPNYG00000009851 ##21 DNAH5 (ENSPNYG00000009634) #22 Haplochromini_B ANCESTRAL SPECIES 70 ENSGT00940000177424.d ENSGT00940000153571.b ENSGT00940000172021 ENSGT00940000175756 ENSGT00940000159969.b.a.b ENSGT00510000048137 ENSGT00940000154607.a ENSGT00940000160303.a.b ENSGT00390000008846 ENSGT00940000163243 ENSGT00950000182913.A.b.a ENSGT00940000155248.vb.g.a ENSGT00940000155248.vb.g.b ENSGT00940000166969.b ENSGT00940000154766.b ##21 ENSGT00940000155533.d #22 ENSGT00940000153866.A.k.b.a.a.a.a ENSGT00390000002188 ENSGT00390000002143.b.b ENSGT00390000016811.g.g.a ENSGT01040000240400.c.a.b.a.b.a.a.b.a.b.b.k.a.a.a.b ENSGT01100000263513.a.a.b.b.b.b.b.a.b.a.a.a ENSGT00940000166049.pb.b ENSGT00940000154365.a.b ENSGT00940000154793.C ENSGT00390000007364.j ENSGT00940000155984.i.b ENSGT00940000159862.b ENSGT00940000159213.q.b ENSGT01040000240400.c.a.b.a.b.a.a.b.a.b.b.k.a.a.a.a.a.a.b ENSGT01040000240400.c.a.b.a.b.a.a.b.a.b.b.k.a.a.a.a.a.a.a.a.a Eastern happy MODERN SPECIES 2 ENSACLG00000018038 CX3CR1 (ENSACLG00000018031) ENSACLG00000018015 ENSACLG00000018007 ENSACLG00000017997 ENSACLG00000017989 ENSACLG00000017980 ENSACLG00000017967 ENSACLG00000017953 ENSACLG00000017737 ENSACLG00000017546 ##21 ENSACLG00000017530 ENSACLG00000017522 ENSACLG00000017508 ENSACLG00000017507 DNAH5 (ENSACLG00000017018) #22 ADCY2 (ENSACLG00000016838) ENSACLG00000016812 ENSACLG00000016786 ADAMTS16 (ENSACLG00000016662) irx1a (ENSACLG00000016599) irx2a (ENSACLG00000016529) ENSACLG00000016515 irx4a (ENSACLG00000016472) LPCAT1 (ENSACLG00000016419) slc6a3 (ENSACLG00000016313) DCDC2 (ENSACLG00000016296) nrsn1 (ENSACLG00000016280) ENSACLG00000016261 ENSACLG00000016234 ENSACLG00000016003 Zebra mbuna DUPLICATION Zebra mbuna DUPLICATION Zebra mbuna DUPLICATION Zebra mbuna DUPLICATION Zebra mbuna MODERN SPECIES 126 ENSMZEG00005027891 #22 ENSMZEG00005027889 ENSMZEG00005027888 ENSMZEG00005027886 ENSMZEG00005027885 ENSMZEG00005027883 #22 ENSMZEG00005027879 ##21 CCR8 (ENSMZEG00005027878) ENSMZEG00005027877 ENSMZEG00005027876 ENSMZEG00005027875 CX3CR1 (ENSMZEG00005027874) ENSMZEG00005027869 ENSMZEG00005027867 Zebra mbuna MODERN SPECIES 393 ENSMZEG00005028476 #22 ENSMZEG00005028475 #22 ENSMZEG00005028474 ENSMZEG00005028473 #22 Zebra mbuna MODERN SPECIES 968 ENSMZEG00005024535 #22 ENSMZEG00005024536 Zebra mbuna MODERN SPECIES 126 ENSMZEG00005027867 ENSMZEG00005027869 CX3CR1 (ENSMZEG00005027874) ENSMZEG00005027875 ENSMZEG00005027876 ENSMZEG00005027877 CCR8 (ENSMZEG00005027878) ENSMZEG00005027879 ##21 ENSMZEG00005027883 #22 ENSMZEG00005027885 ENSMZEG00005027886 ENSMZEG00005027888 ENSMZEG00005027889 ENSMZEG00005027891 #22 Zebra mbuna DUPLICATION Zebra mbuna DUPLICATION Zebra mbuna MODERN SPECIES 393 ENSMZEG00005028473 #22 ENSMZEG00005028474 ENSMZEG00005028475 #22 ENSMZEG00005028476 #22 Zebra mbuna MODERN SPECIES 393 ENSMZEG00005028473 #22 ENSMZEG00005028474 ENSMZEG00005028475 #22 ENSMZEG00005028476 #22 Zebra mbuna MODERN SPECIES 602 ENSMZEG00005026169 ENSMZEG00005026170 ENSMZEG00005026171 #22 Zebra mbuna MODERN SPECIES 941 ENSMZEG00005023076 #22 Midas cichlid DUPLICATION Midas cichlid DUPLICATION Midas cichlid DUPLICATION Midas cichlid MODERN SPECIES 475 tnfrsf21 (ENSACIG00000016609) ENSACIG00000016576 opn5 (ENSACIG00000016555) ENSACIG00000016538 #22 ENSACIG00000016509 #22 Midas cichlid MODERN SPECIES 475 tnfrsf21 (ENSACIG00000016609) ENSACIG00000016576 opn5 (ENSACIG00000016555) ENSACIG00000016538 #22 ENSACIG00000016509 #22 Midas cichlid DUPLICATION Midas cichlid MODERN SPECIES 1218 ENSACIG00000018456 #22 ENSACIG00000018469 #22 Midas cichlid MODERN SPECIES 1218 ENSACIG00000018456 #22 ENSACIG00000018469 #22 Midas cichlid MODERN SPECIES 1613 ENSACIG00000001868 #22 Percomorphaceae_C ANCESTRAL SPECIES 2 ENSGT01050000244890.b ENSGT00940000157621 ENSGT00940000158728.l ENSGT00940000166989 ENSGT00940000153704.A.q ENSGT00940000157131.b ENSGT01100000263542.A ENSGT00940000156004 ENSGT00940000155909.o.a ENSGT00530000063608.A ENSGT01020000230359.A ENSGT01020000230359.B.b ENSGT01020000230359.B.a ENSGT00940000166969.b ENSGT00940000154766.b ##21 ENSGT00940000155533.d #22 ENSGT00940000156424.a ENSGT00940000157811.b.a ENSGT00950000183199.b ENSGT00940000159433 ENSGT00940000160429.h.a ENSGT00940000161198 ENSGT00940000158596.a.a ENSGT01030000234574.A.a.e.a ENSGT00940000161224 ENSGT00940000159377 ENSGT00530000063877.b.a ENSGT01060000248575.D.c.b.a.b.a ENSGT00940000161470.a.a ENSGT00940000155952 ENSGT00940000155115.a.a.a.b Percomorphaceae_D ANCESTRAL SPECIES 2 ENSGT01050000244890.b ENSGT00940000157621 ENSGT00940000158728.l ENSGT00940000166989 ENSGT00940000153704.A.q ENSGT00940000157131.b ENSGT01100000263542.A ENSGT00940000156004 ENSGT00940000155909.o.a ENSGT00530000063608.A ENSGT01020000230359.A ENSGT01020000230359.B.b ENSGT01020000230359.B.a ENSGT00940000166969.b ENSGT00940000154766.b ##21 ENSGT00940000155533.d #22 ENSGT00940000156424.a ENSGT00940000157811.b.a ENSGT00950000183199.b ENSGT00940000159433 ENSGT00940000160429.h.a ENSGT00940000161198 ENSGT00940000158596.a.a ENSGT01030000234574.A.a.e.a ENSGT00940000161224 ENSGT00940000159377 ENSGT00530000063877.b.a ENSGT01060000248575.D.c.b.a.b.a ENSGT00940000161470.a.a ENSGT00940000155952 ENSGT00940000155115.a.a.a.b Carangaria ANCESTRAL SPECIES 1 ENSGT01050000244890.b ENSGT00940000157621 ENSGT00940000158728.l ENSGT00940000166989 ENSGT00940000153704.A.q ENSGT00940000157131.b ENSGT01100000263542.A ENSGT00940000156004 ENSGT00940000155909.o.a ENSGT00530000063608.A ENSGT01020000230359.A ENSGT01020000230359.B.b ENSGT01020000230359.B.a ENSGT00940000166969.b ENSGT00940000154766.b ##21 ENSGT00940000155533.d #22 ENSGT00940000156424.a ENSGT00940000157811.b.a ENSGT00950000183199.b ENSGT00940000159433 ENSGT00940000160429.h.a ENSGT00940000161198 ENSGT00940000158596.a.a ENSGT01030000234574.A.a.e.a ENSGT00940000161224 ENSGT00940000159377 ENSGT00530000063877.b.a ENSGT01060000248575.D.c.b.a.b.a ENSGT00940000161470.a.a ENSGT00940000155952 ENSGT00940000155115.a.a.a.b Carangaria_A ANCESTRAL SPECIES 9 ENSGT00940000155549.a.b ENSGT01050000244890.b ENSGT00940000157621 ENSGT00940000158728.l ENSGT00940000166989 ENSGT00940000153704.A.q ENSGT00940000157131.b ENSGT01100000263542.A ENSGT00940000156004 ENSGT00940000155909.o.a ENSGT00530000063608.A ENSGT01020000230359.A ENSGT01020000230359.B.b ENSGT01020000230359.B.a ENSGT00940000154766.b ##21 ENSGT00940000155533.d #22 ENSGT00940000156424.a ENSGT00940000157811.b.a ENSGT00950000183199.b ENSGT00940000159433 ENSGT00940000160429.h.a ENSGT00940000161198 ENSGT00940000158596.a.a ENSGT01030000234574.A.a.e.a ENSGT00940000161224 ENSGT00940000159377 ENSGT00530000063877.b.a ENSGT01060000248575.D.c.b.a.b.a ENSGT00940000161470.a.a ENSGT00940000155952 ENSGT00940000155115.a.a.a.b Seriola ANCESTRAL SPECIES 16 ENSGT00940000155549.a.b ENSGT01050000244890.b ENSGT00940000157621 ENSGT00940000158728.l ENSGT00940000166989 ENSGT00940000153704.A.q ENSGT00940000157131.b ENSGT01100000263542.A ENSGT00940000156004 ENSGT00940000155909.o.a ENSGT00530000063608.A ENSGT01020000230359.A ENSGT01020000230359.B.b ENSGT01020000230359.B.a ENSGT00940000154766.b ##21 ENSGT00940000155533.d #22 ENSGT00940000156424.a ENSGT00940000157811.b.a ENSGT00950000183199.b ENSGT00940000159433 ENSGT00940000160429.h.a ENSGT00940000161198 ENSGT00940000158596.a.a ENSGT01030000234574.A.a.e.a ENSGT00940000161224 ENSGT00940000159377 ENSGT00530000063877.b.a ENSGT00940000161470.a.a ENSGT00940000155952 ENSGT00940000155115.a.a.a.b ENSGT01030000234564.a.a.a.a.a Greater amberjack MODERN SPECIES 75 CSMD3 (ENSSDUG00000013040) zgc:110410 (ENSSDUG00000013516) ANKIB1 (ENSSDUG00000013545) eomesb (ENSSDUG00000013615) cmc1 (ENSSDUG00000013626) azi2 (ENSSDUG00000013637) rbms3 (ENSSDUG00000013656) entpd3 (ENSSDUG00000013701) ddc (ENSSDUG00000013766) ENSSDUG00000013788 cobl (ENSSDUG00000013828) ENSSDUG00000013869 CCR8 (ENSSDUG00000013878) CCR8 (ENSSDUG00000013883) ENSSDUG00000013907 ##21 DNAH5 (ENSSDUG00000014206) #22 ADCY2 (ENSSDUG00000014787) ENSSDUG00000014825 ENSSDUG00000014846 ADAMTS16 (ENSSDUG00000014889) irx1a (ENSSDUG00000014947) irx2a (ENSSDUG00000014985) irx4a (ENSSDUG00000015004) LPCAT1 (ENSSDUG00000015038) slc6a3 (ENSSDUG00000015097) nrsn1 (ENSSDUG00000015122) ENSSDUG00000015132 sox4b (ENSSDUG00000015143) CDKAL1 (ENSSDUG00000015207) ENSSDUG00000015311 E2F3 (ENSSDUG00000015325) Yellowtail amberjack MODERN SPECIES 2763 CSMD3 (ENSSLDG00000020027) zgc:110410 (ENSSLDG00000020148) ANKIB1 (ENSSLDG00000020179) eomesb (ENSSLDG00000020232) cmc1 (ENSSLDG00000020250) azi2 (ENSSLDG00000020260) rbms3 (ENSSLDG00000020276) entpd3 (ENSSLDG00000020325) ddc (ENSSLDG00000020339) ENSSLDG00000020376 cobl (ENSSLDG00000020495) ENSSLDG00000020532 CCR8 (ENSSLDG00000020542) CCR8 (ENSSLDG00000020557) ENSSLDG00000020586 ##21 DNAH5 (ENSSLDG00000020702) #22 ADCY2 (ENSSLDG00000020843) Barramundi perch MODERN SPECIES 17 eif3ha (ENSLCAG00010017517) CSMD3 (ENSLCAG00010017634) zgc:110410 (ENSLCAG00010017768) ANKIB1 (ENSLCAG00010017775) eomesb (ENSLCAG00010017790) cmc1 (ENSLCAG00010017793) azi2 (ENSLCAG00010017800) rbms3 (ENSLCAG00010017816) entpd3 (ENSLCAG00010017839) ddc (ENSLCAG00010017860) GRB10 (ENSLCAG00010017924) CX3CR1 (ENSLCAG00010018112) CCR8 (ENSLCAG00010018113) CCR8 (ENSLCAG00010018114) ENSLCAG00010018173 ##21 DNAH5 (ENSLCAG00010018352) #22 ADCY2 (ENSLCAG00010018542) TENT4A (ENSLCAG00010018627) ADAMTS16 (ENSLCAG00010018648) irx1a (ENSLCAG00010018670) irx2a (ENSLCAG00010018674) irx4a (ENSLCAG00010018679) LPCAT1 (ENSLCAG00010018686) slc6a3 (ENSLCAG00010018706) ENSLCAG00010001765 nrsn1 (ENSLCAG00010001769) ENSLCAG00010001781 CDKAL1 (ENSLCAG00010001811) sox4b (ENSLCAG00010001830) E2F3 (ENSLCAG00010001834) mboat1 (ENSLCAG00010001847) Pleuronectoidei ANCESTRAL SPECIES 3 ENSGT01050000244890.b ENSGT00940000157621 ENSGT00940000158728.l ENSGT00940000166989 ENSGT00940000153704.A.q ENSGT00940000157131.b ENSGT01100000263542.A ENSGT00940000156004 ENSGT00940000155909.o.a ENSGT00530000063608.A ENSGT01020000230359.A ENSGT01020000230359.B.b ENSGT01020000230359.B.a ENSGT00940000166969.b ENSGT00940000154766.b ##21 ENSGT00940000155533.d #22 ENSGT00940000156424.a ENSGT00940000157811.b.a ENSGT00950000183199.b ENSGT00940000159433 ENSGT00940000160429.h.a ENSGT00940000161198 ENSGT00940000158596.a.a ENSGT01030000234574.A.a.e.a ENSGT00940000161224 ENSGT00940000159377 ENSGT00530000063877.b.a ENSGT00940000161470.a.a ENSGT00940000155952 ENSGT00940000155115.a.a.a.b ENSGT01030000234564.a.a.a.a.a Turbot MODERN SPECIES ENSSMAG00000005310 ENSSMAG00000005274 ENSSMAG00000005243 eomesb (ENSSMAG00000005213) ENSSMAG00000022104 azi2 (ENSSMAG00000005187) RBMS3 (ENSSMAG00000004997) entpd3 (ENSSMAG00000004976) ddc (ENSSMAG00000022350) ENSSMAG00000004849 cobl (ENSSMAG00000004725) ENSSMAG00000004713 ENSSMAG00000004706 ENSSMAG00000025062 ENSSMAG00000004603 ##21 ENSSMAG00000004127 #22 ENSSMAG00000004024 ENSSMAG00000003989 ENSSMAG00000003922 ADAMTS16 (ENSSMAG00000003857) irx1a (ENSSMAG00000003852) irx2a (ENSSMAG00000022904) irx4a (ENSSMAG00000003773) ENSSMAG00000003739 slc6a3 (ENSSMAG00000003672) DCDC2 (ENSSMAG00000003653) nrsn1 (ENSSMAG00000003641) sox4b (ENSSMAG00000003637) CDKAL1 (ENSSMAG00000003573) E2F3 (ENSSMAG00000003546) MBOAT1 (ENSSMAG00000003534) Tongue sole MODERN SPECIES 4 ITGA10 (ENSCSEG00000002443) polr3c (ENSCSEG00000002425) rnf115a (ENSCSEG00000002414) GBA1 (ENSCSEG00000002392) dap3 (ENSCSEG00000002386) ENSCSEG00000002383 ENSCSEG00000002373 fdps (ENSCSEG00000002370) ENSCSEG00000002367 rab13 (ENSCSEG00000002358) rps27.1 (ENSCSEG00000002346) ENSCSEG00000002338 adar (ENSCSEG00000002318) ENSCSEG00000002287 SNX27 (ENSCSEG00000002263) DNAH5 (ENSCSEG00000002215) #22 ENSCSEG00000002205 ENSCSEG00000002203 ENSCSEG00000002199 ENSCSEG00000002186 TMEM107 (ENSCSEG00000002170) TRIM46 (ENSCSEG00000002159) slc50a1 (ENSCSEG00000002153) efna1b (ENSCSEG00000002151) efna3b (ENSCSEG00000002147) ENSCSEG00000002140 ENSCSEG00000002137 ENSCSEG00000002135 ENSCSEG00000002129 SHC1 (ENSCSEG00000002094) pbxip1b (ENSCSEG00000002079) Anabantaria ANCESTRAL SPECIES 2 ENSGT00940000155549.a.b ENSGT01050000244890.b ENSGT00940000157621 ENSGT00940000158728.l ENSGT00940000166989 ENSGT00940000153704.A.q ENSGT00940000157131.b ENSGT01100000263542.A ENSGT00940000156004 ENSGT00940000155909.o.a ENSGT00530000063608.A ENSGT01020000230359.A ENSGT01020000230359.B.b ENSGT01020000230359.B.a ENSGT00940000154766.b ##21 ENSGT00940000155533.d #22 ENSGT00940000156424.a ENSGT00940000157811.b.a ENSGT00950000183199.b ENSGT00940000159433 ENSGT00940000160429.h.a ENSGT00940000161198 ENSGT00940000158596.a.a ENSGT01030000234574.A.a.e.a ENSGT00940000161224 ENSGT00940000159377 ENSGT00530000063877.b.a ENSGT01060000248575.D.c.b.a.b.a ENSGT00940000161470.a.a ENSGT00940000155952 ENSGT00940000155115.a.a.a.b Anabantoidei ANCESTRAL SPECIES 3 ENSGT00940000155549.a.b ENSGT01050000244890.b ENSGT00940000157621 ENSGT00940000158728.l ENSGT00940000166989 ENSGT00940000153704.A.q ENSGT00940000157131.b ENSGT01100000263542.A ENSGT00940000156004 ENSGT00940000155909.o.a ENSGT00530000063608.A ENSGT01020000230359.A ENSGT01020000230359.B.b ENSGT01020000230359.B.a ENSGT00940000154766.b ##21 ENSGT00940000155533.d #22 ENSGT00940000156424.a ENSGT00940000157811.b.a ENSGT00950000183199.b ENSGT00940000159433 ENSGT00940000160429.h.a ENSGT00940000161198 ENSGT00940000158596.a.a ENSGT01030000234574.A.a.e.a ENSGT00940000161224 ENSGT00940000159377 ENSGT00530000063877.b.a ENSGT01060000248575.D.c.b.a.b.a ENSGT00940000161470.a.a ENSGT00940000155952 ENSGT00940000155115.a.a.a.b Climbing perch MODERN SPECIES 7 eomesb (ENSATEG00000024308) ENSATEG00000024305 azi2 (ENSATEG00000024302) RBMS3 (ENSATEG00000024295) entpd3 (ENSATEG00000024293) ddc (ENSATEG00000024290) ENSATEG00000024287 cobl (ENSATEG00000024278) ENSATEG00000030154 ENSATEG00000024261 ENSATEG00000024258 ENSATEG00000024255 ENSATEG00000026108 ENSATEG00000025734 ENSATEG00000024239 ##21 ENSATEG00000024212 #22 ENSATEG00000024202 ENSATEG00000024197 ENSATEG00000024192 ADAMTS16 (ENSATEG00000024185) irx1a (ENSATEG00000024177) irx2a (ENSATEG00000024174) irx4a (ENSATEG00000024168) ENSATEG00000024162 slc6a3 (ENSATEG00000024157) DCDC2 (ENSATEG00000028429) nrsn1 (ENSATEG00000024148) ENSATEG00000024141 ENSATEG00000024120 sox4b (ENSATEG00000024103) CDKAL1 (ENSATEG00000024092) Siamese fighting fish MODERN SPECIES 7 CSMD3 (ENSBSLG00000023305) zgc:110410 (ENSBSLG00000023149) ANKIB1 (ENSBSLG00000023099) eomesb (ENSBSLG00000022981) cmc1 (ENSBSLG00000022927) azi2 (ENSBSLG00000022908) rbms3 (ENSBSLG00000022849) entpd3 (ENSBSLG00000022804) ddc (ENSBSLG00000022416) GRB10 (ENSBSLG00000021356) cobl (ENSBSLG00000021140) ENSBSLG00000021087 ENSBSLG00000021062 ENSBSLG00000021015 ENSBSLG00000020981 DNAH5 (ENSBSLG00000019890) #22 ADCY2 (ENSBSLG00000019448) TENT4A (ENSBSLG00000019278) ENSBSLG00000019271 ADAMTS16 (ENSBSLG00000018867) irx1a (ENSBSLG00000018830) irx2a (ENSBSLG00000018817) irx4a (ENSBSLG00000018764) LPCAT1 (ENSBSLG00000018557) slc6a3 (ENSBSLG00000017958) ENSBSLG00000017917 nrsn1 (ENSBSLG00000017902) ENSBSLG00000017888 sox4b (ENSBSLG00000017876) CDKAL1 (ENSBSLG00000017574) E2F3 (ENSBSLG00000017543) Zig-zag eel MODERN SPECIES 7 ENSMAMG00000024047 eomesb (ENSMAMG00000024046) ENSMAMG00000024045 azi2 (ENSMAMG00000024044) RBMS3 (ENSMAMG00000024043) entpd3 (ENSMAMG00000024042) ddc (ENSMAMG00000024041) ENSMAMG00000024040 cobl (ENSMAMG00000024039) ENSMAMG00000024038 ENSMAMG00000024037 ENSMAMG00000024036 ENSMAMG00000024534 ENSMAMG00000024033 ENSMAMG00000024034 ##21 ENSMAMG00000024032 #22 ENSMAMG00000024031 ENSMAMG00000024030 ADAMTS16 (ENSMAMG00000024028) irx1a (ENSMAMG00000024027) irx2a (ENSMAMG00000024026) irx4a (ENSMAMG00000024025) ENSMAMG00000024024 slc6a3 (ENSMAMG00000024023) DCDC2 (ENSMAMG00000024022) nrsn1 (ENSMAMG00000024021) ENSMAMG00000024018 ENSMAMG00000024019 ENSMAMG00000024020 ENSMAMG00000024916 sox4b (ENSMAMG00000024017) Eupercaria ANCESTRAL SPECIES 1 ENSGT00940000155549.a.b ENSGT01050000244890.b ENSGT00940000157621 ENSGT00940000158728.l ENSGT00940000166989 ENSGT00940000153704.A.q ENSGT00940000157131.b ENSGT01100000263542.A ENSGT00940000156004 ENSGT00940000155909.o.a ENSGT00530000063608.A ENSGT01020000230359.A ENSGT01020000230359.B.b ENSGT01020000230359.B.a ENSGT00940000154766.b ##21 ENSGT00940000155533.d #22 ENSGT00940000156424.a ENSGT00940000157811.b.a ENSGT00950000183199.b ENSGT00940000159433 ENSGT00940000160429.h.a ENSGT00940000161198 ENSGT00940000158596.a.a ENSGT01030000234574.A.a.e.a ENSGT00940000161224 ENSGT00940000159377 ENSGT00530000063877.b.a ENSGT01060000248575.D.c.b.a.b.a ENSGT00940000161470.a.a ENSGT00940000155952 ENSGT00940000155115.a.a.a.b Eupecaria_A ANCESTRAL SPECIES 2 ENSGT00940000155549.a.b ENSGT01050000244890.b ENSGT00940000157621 ENSGT00940000158728.l ENSGT00940000166989 ENSGT00940000153704.A.q ENSGT00940000157131.b ENSGT01100000263542.A ENSGT00940000156004 ENSGT00940000155909.o.a ENSGT00530000063608.A ENSGT01020000230359.A ENSGT01020000230359.B.b ENSGT01020000230359.B.a ENSGT00940000154766.b ##21 ENSGT00940000155533.d #22 ENSGT00940000156424.a ENSGT00940000157811.b.a ENSGT00950000183199.b ENSGT00940000159433 ENSGT00940000160429.h.a ENSGT00940000161198 ENSGT00940000158596.a.a ENSGT01030000234574.A.a.e.a ENSGT00940000161224 ENSGT00940000159377 ENSGT00530000063877.b.a ENSGT01060000248575.D.c.b.a.b.a ENSGT00940000161470.a.a ENSGT00940000155952 ENSGT00940000155115.a.a.a.b Ballan wrasse MODERN SPECIES 69 ENSLBEG00000021026 ##21 DNAH5 (ENSLBEG00000021135) #22 ADCY2 (ENSLBEG00000021518) TENT4A (ENSLBEG00000021596) ENSLBEG00000021621 ADAMTS16 (ENSLBEG00000021681) irx1a (ENSLBEG00000021794) irx2a (ENSLBEG00000021820) irx4a (ENSLBEG00000021844) LPCAT1 (ENSLBEG00000021887) slc6a3 (ENSLBEG00000021954) nrsn1 (ENSLBEG00000022002) ENSLBEG00000022163 sox4b (ENSLBEG00000022430) CDKAL1 (ENSLBEG00000022455) ENSLBEG00000022497 mboat1 (ENSLBEG00000022521) Eupecaria_B ANCESTRAL SPECIES 4 ENSGT00940000155549.a.b ENSGT01050000244890.b ENSGT00940000157621 ENSGT00940000158728.l ENSGT00940000166989 ENSGT00940000153704.A.q ENSGT00940000157131.b ENSGT01100000263542.A ENSGT00940000156004 ENSGT00940000155909.o.a ENSGT00530000063608.A ENSGT01020000230359.A ENSGT01020000230359.B.b ENSGT01020000230359.B.a ENSGT00940000154766.b ##21 ENSGT00940000155533.d #22 ENSGT00940000156424.a ENSGT00940000157811.b.a ENSGT00950000183199.b ENSGT00940000159433 ENSGT00940000160429.h.a ENSGT00940000161198 ENSGT00940000158596.a.a ENSGT01030000234574.A.a.e.a ENSGT00940000161224 ENSGT00940000159377 ENSGT00530000063877.b.a ENSGT01060000248575.D.c.b.a.b.a ENSGT00940000161470.a.a ENSGT00940000155952 ENSGT00940000155115.a.a.a.b Perciformes ANCESTRAL SPECIES 3 ENSGT00940000155549.a.b ENSGT01050000244890.b ENSGT00940000157621 ENSGT00940000158728.l ENSGT00940000166989 ENSGT00940000153704.A.q ENSGT00940000157131.b ENSGT01100000263542.A ENSGT00940000156004 ENSGT00940000155909.o.a ENSGT00530000063608.A ENSGT01020000230359.A ENSGT01020000230359.B.b ENSGT01020000230359.B.a ENSGT00940000154766.b ##21 ENSGT00940000155533.d #22 ENSGT00940000156424.a ENSGT00940000157811.b.a ENSGT00950000183199.b ENSGT00940000159433 ENSGT00940000160429.h.a ENSGT00940000161198 ENSGT00940000158596.a.a ENSGT01030000234574.A.a.e.a ENSGT00940000161224 ENSGT00940000159377 ENSGT00530000063877.b.a ENSGT01060000248575.D.c.b.a.b.a ENSGT00940000161470.a.a ENSGT00940000155952 ENSGT00940000155115.a.a.a.b Perciformes_a ANCESTRAL SPECIES 3 ENSGT00940000155549.a.b ENSGT01050000244890.b ENSGT00940000157621 ENSGT00940000158728.l ENSGT00940000166989 ENSGT00940000153704.A.q ENSGT00940000157131.b ENSGT01100000263542.A ENSGT00940000156004 ENSGT00940000155909.o.a ENSGT00530000063608.A ENSGT01020000230359.A ENSGT01020000230359.B.b ENSGT01020000230359.B.a ENSGT00940000154766.b ##21 ENSGT00940000155533.d #22 ENSGT00940000156424.a ENSGT00940000157811.b.a ENSGT00950000183199.b ENSGT00940000159433 ENSGT00940000160429.h.a ENSGT00940000161198 ENSGT00940000158596.a.a ENSGT01030000234574.A.a.e.a ENSGT00940000161224 ENSGT00940000159377 ENSGT00530000063877.b.a ENSGT01060000248575.D.c.b.a.b.a ENSGT00940000161470.a.a ENSGT00940000155952 ENSGT00940000155115.a.a.a.b Pike perch MODERN SPECIES 15 CCR8 (ENSSLUG00000001353) CCR8 (ENSSLUG00000001356) ENSSLUG00000001747 ##21 DNAH5 (ENSSLUG00000004788) #22 ADCY2 (ENSSLUG00000004890) TENT4A (ENSSLUG00000004991) ENSSLUG00000005027 ADAMTS16 (ENSSLUG00000005044) irx1a (ENSSLUG00000005071) irx2a (ENSSLUG00000005099) irx4a (ENSSLUG00000005163) ENSSLUG00000005191 ENSSLUG00000005197 ENSSLUG00000005204 slc6a3 (ENSSLUG00000005214) DCDC2 (ENSSLUG00000005251) nrsn1 (ENSSLUG00000005268) ENSSLUG00000005276 ENSSLUG00000005310 Channel bull blenny MODERN SPECIES 7 zgc:110410 (ENSCGOG00000021087) ANKIB1 (ENSCGOG00000020947) eomesb (ENSCGOG00000020919) cmc1 (ENSCGOG00000020914) azi2 (ENSCGOG00000020909) rbms3 (ENSCGOG00000019662) entpd3 (ENSCGOG00000019643) ddc (ENSCGOG00000019524) ENSCGOG00000019411 ENSCGOG00000019403 ENSCGOG00000019400 ENSCGOG00000019397 ENSCGOG00000019394 CCR8 (ENSCGOG00000019392) ENSCGOG00000019345 ##21 DNAH5 (ENSCGOG00000019126) #22 ADCY2 (ENSCGOG00000018652) ENSCGOG00000018639 ENSCGOG00000018638 ADAMTS16 (ENSCGOG00000018633) irx1a (ENSCGOG00000018630) irx2a (ENSCGOG00000018629) irx4a (ENSCGOG00000018626) LPCAT1 (ENSCGOG00000018622) slc6a3 (ENSCGOG00000018213) nrsn1 (ENSCGOG00000018198) ENSCGOG00000018191 sox4b (ENSCGOG00000018189) CDKAL1 (ENSCGOG00000017807) E2F3 (ENSCGOG00000017795) mboat1 (ENSCGOG00000017719) Cottioidei ANCESTRAL SPECIES 7 ENSGT00940000155549.a.b ENSGT01050000244890.b ENSGT00940000157621 ENSGT00940000158728.l ENSGT00940000166989 ENSGT00940000153704.A.q ENSGT00940000157131.b ENSGT01100000263542.A ENSGT00940000156004 ENSGT00940000155909.o.a ENSGT00530000063608.A ENSGT01020000230359.A ENSGT01020000230359.B.b ENSGT01020000230359.B.a ENSGT00940000154766.b ##21 ENSGT00940000155533.d #22 ENSGT00940000156424.a ENSGT00940000157811.b.a ENSGT00950000183199.b ENSGT00940000159433 ENSGT00940000160429.h.a ENSGT00940000161198 ENSGT00940000158596.a.a ENSGT01030000234574.A.a.e.a ENSGT00940000161224 ENSGT00940000159377 ENSGT00530000063877.b.a ENSGT00940000161470.a.a ENSGT00940000155952 ENSGT00940000155115.a.a.a.b ENSGT01030000234564.a.a.a.a.a Lumpfish MODERN SPECIES 7 ANKIB1 (ENSCLMG00005006062) eomesb (ENSCLMG00005006084) cmc1 (ENSCLMG00005006158) azi2 (ENSCLMG00005006159) rbms3 (ENSCLMG00005006160) entpd3 (ENSCLMG00005006162) ENSCLMG00005006164 ddc (ENSCLMG00005006173) ddc (ENSCLMG00005009330) ddc (ENSCLMG00005009331) ddc (ENSCLMG00005009335) GRB10 (ENSCLMG00005009342) cobl (ENSCLMG00005009857) CCR8 (ENSCLMG00005009860) ENSCLMG00005009872 ##21 DNAH5 (ENSCLMG00005010582) #22 ADCY2 (ENSCLMG00005010602) TENT4A (ENSCLMG00005010606) ENSCLMG00005010611 ADAMTS16 (ENSCLMG00005010617) irx1a (ENSCLMG00005010621) irx2a (ENSCLMG00005004346) irx4a (ENSCLMG00005004426) ENSCLMG00005004593 slc6a3 (ENSCLMG00005004616) ENSCLMG00005004650 DCDC2 (ENSCLMG00005004675) nrsn1 (ENSCLMG00005004787) sox4b (ENSCLMG00005004791) CDKAL1 (ENSCLMG00005004820) ENSCLMG00005006229 Stickleback MODERN SPECIES 19 CSMD3 (ENSGACG00000006307) zgc:110410 (ENSGACG00000006328) ANKIB1 (ENSGACG00000006337) eomesb (ENSGACG00000006345) cmc1 (ENSGACG00000006355) azi2 (ENSGACG00000006371) rbms3 (ENSGACG00000006377) entpd3 (ENSGACG00000006387) ddc (ENSGACG00000006397) ENSGACG00000006438 cobl (ENSGACG00000006446) ENSGACG00000006455 CCR8 (ENSGACG00000006457) CCR8 (ENSGACG00000006459) ENSGACG00000006462 ##21 DNAH5 (ENSGACG00000006485) #22 ADCY2 (ENSGACG00000006520) TENT4A (ENSGACG00000006531) ENSGACG00000006535 ADAMTS16 (ENSGACG00000006552) irx1a (ENSGACG00000006572) irx2a (ENSGACG00000006581) nrsn1 (ENSGACG00000006587) irx4a (ENSGACG00000006607) LPCAT1 (ENSGACG00000006610) slc6a3 (ENSGACG00000006614) sox4b (ENSGACG00000006620) CDKAL1 (ENSGACG00000006622) E2F3 (ENSGACG00000006632) TMEM65 (ENSGACG00000006642) MTSS1 (ENSGACG00000006650) Eupecaria_C ANCESTRAL SPECIES 2 ENSGT00940000155549.a.b ENSGT01050000244890.b ENSGT00940000157621 ENSGT00940000158728.l ENSGT00940000166989 ENSGT00940000153704.A.q ENSGT00940000157131.b ENSGT01100000263542.A.f ENSGT00940000156004 ENSGT00940000155909.o.a ENSGT00530000063608.A ENSGT01020000230359.A ENSGT01020000230359.B.b ENSGT01020000230359.B.a ENSGT00940000154766.b ##21 ENSGT00940000155533.d #22 ENSGT00940000156424.a ENSGT00940000157811.b.a ENSGT00950000183199.b ENSGT00940000159433 ENSGT00940000160429.h.a ENSGT00940000161198 ENSGT00940000158596.a.a ENSGT01030000234574.A.a.e.a ENSGT00940000161224 ENSGT00940000159377 ENSGT00530000063877.b.a ENSGT01060000248575.D.c.b.a.b.a.l.b ENSGT00940000161470.a.a ENSGT00940000155952 ENSGT00940000155115.a.a.a.b Eupercaria_incertae_sedis ANCESTRAL SPECIES 2 ENSGT00940000155549.a.b ENSGT01050000244890.b ENSGT00940000157621 ENSGT00940000158728.l ENSGT00940000166989 ENSGT00940000153704.A.q ENSGT00940000157131.b ENSGT01100000263542.A.f ENSGT00940000156004 ENSGT00940000155909.o.a ENSGT00530000063608.A ENSGT01020000230359.A ENSGT01020000230359.B.b ENSGT01020000230359.B.a ENSGT00940000154766.b ##21 ENSGT00940000155533.d #22 ENSGT00940000156424.a ENSGT00940000157811.b.a ENSGT00950000183199.b ENSGT00940000159433 ENSGT00940000160429.h.a ENSGT00940000161198 ENSGT00940000158596.a.a ENSGT01030000234574.A.a.e.a ENSGT00940000161224 ENSGT00940000159377 ENSGT00530000063877.b.a ENSGT01060000248575.D.c.b.a.b.a.l.b ENSGT00940000161470.a.a ENSGT00940000155952 ENSGT00940000155115.a.a.a.b European seabass MODERN SPECIES 6 ENSDLAG00005020946 ENSDLAG00005020899 eomesb (ENSDLAG00005020890) ENSDLAG00005030140 azi2 (ENSDLAG00005020872) RBMS3 (ENSDLAG00005020807) entpd3 (ENSDLAG00005020794) ddc (ENSDLAG00005020771) ENSDLAG00005019972 cobl (ENSDLAG00005019888) ENSDLAG00005024611 ENSDLAG00005033027 ENSDLAG00005031638 ENSDLAG00005019868 ENSDLAG00005016176 ##21 ENSDLAG00005015456 #22 ENSDLAG00005014639 ENSDLAG00005014528 ENSDLAG00005014513 ADAMTS16 (ENSDLAG00005014230) ENSDLAG00005029488 ENSDLAG00005034153 irx1a (ENSDLAG00005014217) irx2a (ENSDLAG00005027283) irx4a (ENSDLAG00005014202) ENSDLAG00005014159 slc6a3 (ENSDLAG00005013489) DCDC2 (ENSDLAG00005026563) nrsn1 (ENSDLAG00005032271) ENSDLAG00005013434 ENSDLAG00005013418 Large yellow croaker MODERN SPECIES 484 CSMD3 (ENSLCRG00005019535) ENSLCRG00005019224 ANKIB1 (ENSLCRG00005019157) eomesb (ENSLCRG00005019138) cmc1 (ENSLCRG00005019130) azi2 (ENSLCRG00005019121) rbms3 (ENSLCRG00005018759) entpd3 (ENSLCRG00005018721) ddc (ENSLCRG00005018653) ENSLCRG00005018618 cobl (ENSLCRG00005018600) ENSLCRG00005018584 CCR8 (ENSLCRG00005018582) CCR8 (ENSLCRG00005018580) ENSLCRG00005018467 ##21 DNAH5 (ENSLCRG00005018334) #22 ADCY2 (ENSLCRG00005018148) TENT4A (ENSLCRG00005018122) ENSLCRG00005018119 ADAMTS16 (ENSLCRG00005017931) irx1a (ENSLCRG00005017890) irx2a (ENSLCRG00005017881) irx4a (ENSLCRG00005017874) LPCAT1 (ENSLCRG00005017854) slc6a3 (ENSLCRG00005017387) DCDC2 (ENSLCRG00005017367) nrsn1 (ENSLCRG00005017362) sox4b (ENSLCRG00005017359) CDKAL1 (ENSLCRG00005017341) e2f3 (ENSLCRG00005017336) mboat1 (ENSLCRG00005017319) Gilthead seabream MODERN SPECIES 8 ANKIB1 (ENSSAUG00010020192) eomesb (ENSSAUG00010020207) cmc1 (ENSSAUG00010020208) azi2 (ENSSAUG00010020210) rbms3 (ENSSAUG00010020213) entpd3 (ENSSAUG00010020245) ENSSAUG00010020249 ddc (ENSSAUG00010020250) ENSSAUG00010020297 GRB10 (ENSSAUG00010020325) cobl (ENSSAUG00010021291) ENSSAUG00010021295 CCR8 (ENSSAUG00010021297) CCR8 (ENSSAUG00010021298) ENSSAUG00010021300 ##21 DNAH5 (ENSSAUG00010021567) #22 ADCY2 (ENSSAUG00010021610) TENT4A (ENSSAUG00010021639) ENSSAUG00010021644 ADAMTS16 (ENSSAUG00010021654) irx1a (ENSSAUG00010021667) irx2a (ENSSAUG00010021671) irx4a (ENSSAUG00010021674) LPCAT1 (ENSSAUG00010021683) slc6a3 (ENSSAUG00010021894) ENSSAUG00010021985 DCDC2 (ENSSAUG00010021987) nrsn1 (ENSSAUG00010021988) ENSSAUG00010021993 ENSSAUG00010021996 sox4b (ENSSAUG00010021998) Tetraodontidae ANCESTRAL SPECIES 14 ENSGT00940000155549.a.b ENSGT01050000244890.b ENSGT00940000157621 ENSGT00940000158728.l ENSGT00940000166989 ENSGT00940000153704.A.q ENSGT00940000157131.b ENSGT01100000263542.A ENSGT00940000156004 ENSGT00940000155909.o.a ENSGT00530000063608.A ENSGT01020000230359.A ENSGT01020000230359.B.b ENSGT01020000230359.B.a ENSGT00940000154766.b ##21 ENSGT00940000155533.d #22 ENSGT00940000156424.a ENSGT00940000157811.b.a ENSGT00950000183199.b ENSGT00940000159433 ENSGT00940000160429.h.a ENSGT00940000161198 ENSGT00940000158596.a.a ENSGT01030000234574.A.a.e.a ENSGT00940000161224 ENSGT00940000159377 ENSGT00530000063877.b.a ENSGT00940000161470.a.a ENSGT00940000155952 ENSGT00940000155115.a.a.a.b ENSGT01030000234564.a.a.a.a.a Fugu MODERN SPECIES 19 eif3ha (ENSTRUG00000007425) CSMD3 (ENSTRUG00000010752) ENSTRUG00000008793 ANKIB1 (ENSTRUG00000008837) eomesb (ENSTRUG00000008966) cmc1 (ENSTRUG00000009107) azi2 (ENSTRUG00000026808) rbms3 (ENSTRUG00000021719) entpd3 (ENSTRUG00000009318) ddc (ENSTRUG00000009415) ENSTRUG00000009828 cobl (ENSTRUG00000009979) ENSTRUG00000032932 ENSTRUG00000010075 CCR8 (ENSTRUG00000010083) DNAH5 (ENSTRUG00000003584) #22 ADCY2 (ENSTRUG00000004979) TENT4A (ENSTRUG00000006698) ENSTRUG00000006735 ENSTRUG00000032277 ADAMTS16 (ENSTRUG00000006843) ENSTRUG00000030730 irx1a (ENSTRUG00000007467) irx2a (ENSTRUG00000007607) irx4a (ENSTRUG00000007775) LPCAT1 (ENSTRUG00000007993) DCDC2 (ENSTRUG00000020536) nrsn1 (ENSTRUG00000008167) sox4b (ENSTRUG00000008283) CDKAL1 (ENSTRUG00000008317) E2F3 (ENSTRUG00000025067) Tetraodon DUPLICATION Tetraodon MODERN SPECIES 26 tm2d3 (ENSTNIG00000011927) ENSTNIG00000011928 ulk3 (ENSTNIG00000001896) cplx3a (ENSTNIG00000011930) CSK (ENSTNIG00000011931) cyp1a (ENSTNIG00000011932) ENSTNIG00000011933 ENSTNIG00000012093 rgma (ENSTNIG00000012691) ENSTNIG00000012692 ENSTNIG00000012693 SLCO3A1 (ENSTNIG00000012694) gas2l3 (ENSTNIG00000012950) ENSTNIG00000000605 ENSTNIG00000013985 ENSTNIG00000014165 #22 MATN3 (ENSTNIG00000014166) ENSTNIG00000000004 inhbab (ENSTNIG00000014168) ENSTNIG00000001198 ENSTNIG00000000608 ENSTNIG00000001074 hccsb (ENSTNIG00000014170) ENSTNIG00000001067 ENSTNIG00000014171 ENSTNIG00000014172 ENSTNIG00000014173 cacna1fb (ENSTNIG00000014174) ankrd49 (ENSTNIG00000014179) GPR83 (ENSTNIG00000014180) cdk2ap2 (ENSTNIG00000014181) Tetraodon DUPLICATION Tetraodon MODERN SPECIES 23 ENSTNIG00000019113 zgc:110410 (ENSTNIG00000019114) ENSTNIG00000019115 eomesb (ENSTNIG00000019116) cmc1 (ENSTNIG00000019117) azi2 (ENSTNIG00000019118) rbms3 (ENSTNIG00000013819) entpd3 (ENSTNIG00000019119) ENSTNIG00000019120 cobl (ENSTNIG00000019121) ENSTNIG00000001750 ENSTNIG00000019122 CCR8 (ENSTNIG00000019123) ENSTNIG00000019124 ##21 ENSTNIG00000019063 #22 ENSTNIG00000004421 #22 ADCY2 (ENSTNIG00000004420) ENSTNIG00000003741 ENSTNIG00000000537 ADAMTS16 (ENSTNIG00000003742) irx2a (ENSTNIG00000007221) irx4a (ENSTNIG00000007220) ENSTNIG00000001193 LPCAT1 (ENSTNIG00000007219) slc6a3 (ENSTNIG00000007218) DCDC2 (ENSTNIG00000007217) nrsn1 (ENSTNIG00000007216) sox4b (ENSTNIG00000009619) CDKAL1 (ENSTNIG00000009620) E2F3 (ENSTNIG00000009621) mboat1 (ENSTNIG00000009622) Tetraodon MODERN SPECIES 23 ENSTNIG00000001340 ENSTNIG00000019113 zgc:110410 (ENSTNIG00000019114) ENSTNIG00000019115 eomesb (ENSTNIG00000019116) cmc1 (ENSTNIG00000019117) azi2 (ENSTNIG00000019118) rbms3 (ENSTNIG00000013819) entpd3 (ENSTNIG00000019119) ENSTNIG00000019120 cobl (ENSTNIG00000019121) ENSTNIG00000001750 ENSTNIG00000019122 CCR8 (ENSTNIG00000019123) ENSTNIG00000019124 ##21 ENSTNIG00000019063 #22 ENSTNIG00000004421 #22 ADCY2 (ENSTNIG00000004420) ENSTNIG00000003741 ENSTNIG00000000537 ADAMTS16 (ENSTNIG00000003742) irx2a (ENSTNIG00000007221) irx4a (ENSTNIG00000007220) ENSTNIG00000001193 LPCAT1 (ENSTNIG00000007219) slc6a3 (ENSTNIG00000007218) DCDC2 (ENSTNIG00000007217) nrsn1 (ENSTNIG00000007216) sox4b (ENSTNIG00000009619) CDKAL1 (ENSTNIG00000009620) E2F3 (ENSTNIG00000009621) Otomorpha ANCESTRAL SPECIES 153 ENSGT00390000012832 ENSGT00390000016277.a.k ENSGT00940000157537 ENSGT00940000155365.a.a ENSGT00940000160695 ENSGT00420000029769.a ENSGT01100000263542.A ENSGT00940000156004 ENSGT00940000155909.o.a ENSGT00530000063608.A ENSGT01020000230359.A ENSGT01020000230359.B.b ENSGT01020000230359.B.a ENSGT00940000166969.b ENSGT00940000154766.b ##21 ENSGT00940000155533.d #22 ENSGT00940000156424.a ENSGT00940000157811.b.a ENSGT00950000183199.b Clupeiformes ANCESTRAL SPECIES ENSGT00940000155533.d #22 Denticle herring MODERN SPECIES 15 skap2 (ENSDCDG00000001259) ENSDCDG00000001250 hoxa11b (ENSDCDG00000001236) hoxa13b (ENSDCDG00000001227) hibadhb (ENSDCDG00000001155) tax1bp1b (ENSDCDG00000001131) JAZF1 (ENSDCDG00000001120) CREB5 (ENSDCDG00000001114) cpvl (ENSDCDG00000001071) CHN2 (ENSDCDG00000000940) ENSDCDG00000000907 fkbp14 (ENSDCDG00000000901) plekha8 (ENSDCDG00000000889) COLQ (ENSDCDG00000000876) hacl1 (ENSDCDG00000000855) DNAH5 (ENSDCDG00000000794) #22 TMEM14C (ENSDCDG00000000765) mboat1 (ENSDCDG00000000702) ENSDCDG00000000680 ENSDCDG00000000676 CDKAL1 (ENSDCDG00000000592) sox4b (ENSDCDG00000000547) nrsn1 (ENSDCDG00000000539) DCDC2 (ENSDCDG00000000532) slc6a3 (ENSDCDG00000000384) LPCAT1 (ENSDCDG00000033145) irx4a (ENSDCDG00000033130) irx2a (ENSDCDG00000033126) ENSDCDG00000033125 ENSDCDG00000033123 arglu1b (ENSDCDG00000033120) Otophysi ANCESTRAL SPECIES 58 ENSGT00390000012832 ENSGT00390000016277.a.k ENSGT00940000157537 ENSGT00940000155365.a.a ENSGT00940000160695 ENSGT00420000029769.a ENSGT01100000263542.A ENSGT00940000156004 ENSGT00940000155909.o.a ENSGT00530000063608.A ENSGT01020000230359.A ENSGT01020000230359.B.b ENSGT01020000230359.B.a ENSGT00940000166969.b ENSGT00940000154766.b ##21 ENSGT00940000155533.d #22 ENSGT00940000156424.a ENSGT00940000157811.b.a ENSGT00950000183199.b ENSGT00390000011497 ENSGT00940000164936.a ENSGT00390000000420 ENSGT00940000155778.B ENSGT00940000159963 ENSGT00940000159514 ENSGT00940000159374 ENSGT00940000155167.b.b ENSGT00940000155167.b.a.a ENSGT00940000155112.B.a ENSGT00950000183108.a.c ENSGT00950000183156.a.b.b.b.b.a.d Characiphysae ANCESTRAL SPECIES 49 ENSGT00940000154307.A ENSGT00390000017838 ENSGT00940000159641 ENSGT00940000153801.a ENSGT00440000033742.a.a ENSGT00390000012596.f ENSGT00940000164178.db.a ENSGT00940000156004 ENSGT00940000155909.o.a ENSGT00530000063608.A ENSGT01020000230359.A ENSGT01020000230359.B.b ENSGT01020000230359.B.a ENSGT00940000166969.b ENSGT00940000154766.b ##21 ENSGT00940000155533.d #22 ENSGT00940000156424.a ENSGT00940000157811.b.a ENSGT00950000183199.b ENSGT00390000011497 ENSGT00940000164936.a ENSGT00390000000420 ENSGT00940000155778.B ENSGT00940000159963 ENSGT00940000159514 ENSGT00940000159374 ENSGT00940000155167.b.b ENSGT00940000155167.b.a.a ENSGT00940000155112.B.a ENSGT00950000183108.a.c.c ENSGT00950000183156.a.b.b.b.b.a.d Characiphysae_b ANCESTRAL SPECIES 99 ENSGT00510000049652 ENSGT00940000154307.A ENSGT00390000017838 ENSGT00940000159641 ENSGT00940000153801.a ENSGT00440000033742.a.a ENSGT00390000012596.f ENSGT00940000164178.db.a ENSGT00940000156004 ENSGT00940000155909.o.a ENSGT00530000063608.A ENSGT01020000230359.A ENSGT01020000230359.B.b ENSGT01020000230359.B.a ENSGT00940000154766.b ##21 ENSGT00940000155533.d #22 ENSGT00940000156424.a ENSGT00940000157811.b.a ENSGT00950000183199.b ENSGT00390000011497 ENSGT00940000164936.a ENSGT00390000000420 ENSGT00940000155778.B ENSGT00940000159963 ENSGT00940000159514 ENSGT00940000159374 ENSGT00940000155167.b.b ENSGT00940000155167.b.a.a ENSGT00940000155112.B.a ENSGT00950000183108.a.c.c ENSGT00950000183156.a.b.b.b.b.a.d Characoidei ANCESTRAL SPECIES 60 ENSGT00390000017838 ENSGT00940000154307.A ENSGT01000000218705 ENSGT00940000159641 ENSGT00940000153801.a ENSGT00440000033742.a.a ENSGT00390000012596.f ENSGT00940000164178.db.a ENSGT00940000156004 ENSGT00940000155909.o.a ENSGT00530000063608.A ENSGT01020000230359.A.u ENSGT01020000230359.B.b ENSGT01020000230359.B.a ENSGT00940000154766.b ##21 ENSGT00940000155533.d #22 ENSGT00940000156424.a ENSGT00940000157811.b.a ENSGT00950000183199.b ENSGT00390000011497 ENSGT00390000018360.a ENSGT00940000156893 ENSGT00390000000420 ENSGT00940000155778.B ENSGT00940000159963 ENSGT00940000159514 ENSGT00940000159374 ENSGT00940000155167.b.b ENSGT00940000162635.ob ENSGT00940000155112.B.a ENSGT00950000183108.a.c.c Red-bellied piranha MODERN SPECIES 70 ENSPNAG00000012555 RDH13 (ENSPNAG00000002293) decr2 (ENSPNAG00000002290) rab11fip3 (ENSPNAG00000012528) ENSPNAG00000002266 AGL (ENSPNAG00000012454) ENSPNAG00000012300 ddc (ENSPNAG00000012267) GRB10 (ENSPNAG00000002153) cobl (ENSPNAG00000012144) ENSPNAG00000012073 CCR8 (ENSPNAG00000002086) CCR8 (ENSPNAG00000012062) ENSPNAG00000002082 ENSPNAG00000012018 ##21 DNAH5 (ENSPNAG00000001933) #22 ADCY2 (ENSPNAG00000001857) TENT4A (ENSPNAG00000011603) ice1 (ENSPNAG00000001809) prpf3 (ENSPNAG00000001799) ENSPNAG00000001758 ca14 (ENSPNAG00000001753) taf2 (ENSPNAG00000001742) enpp2 (ENSPNAG00000001739) CCN3 (ENSPNAG00000011433) mal2 (ENSPNAG00000011425) si:ch211-93i7.4 (ENSPNAG00000011397) TNFRSF11B (ENSPNAG00000011418) ENSPNAG00000001714 CARMIL1 (ENSPNAG00000011382) scgn (ENSPNAG00000001675) Mexicana tetra MODERN SPECIES 2 RDH13 (ENSAMXG00000019556) decr2 (ENSAMXG00000040698) rab11fip3 (ENSAMXG00000019520) AGL (ENSAMXG00000019499) ENSAMXG00000019467 ddc (ENSAMXG00000019455) GRB10 (ENSAMXG00000019421) ENSAMXG00000036059 cobl (ENSAMXG00000019415) CX3CR1 (ENSAMXG00000032773) CCR8 (ENSAMXG00000029794) ENSAMXG00000043119 ENSAMXG00000041813 ENSAMXG00000040867 ENSAMXG00000007530 ##21 DNAH5 (ENSAMXG00000007429) #22 ENSAMXG00000038886 ADCY2 (ENSAMXG00000038314) TENT4A (ENSAMXG00000039964) ice1 (ENSAMXG00000042159) prpf3 (ENSAMXG00000007306) ENSAMXG00000038153 ca14 (ENSAMXG00000036060) taf2 (ENSAMXG00000007296) enpp2 (ENSAMXG00000007268) CCN3 (ENSAMXG00000035188) mal2 (ENSAMXG00000040616) si:ch211-93i7.4 (ENSAMXG00000033176) TNFRSF11B (ENSAMXG00000035635) ENSAMXG00000040250 CARMIL1 (ENSAMXG00000007246) Electric eel MODERN SPECIES 174 ENSEEEG00000011893 ##21 DNAH5 (ENSEEEG00000011873) #22 ADCY2 (ENSEEEG00000011871) TENT4A (ENSEEEG00000011867) ENSEEEG00000011864 prpf3 (ENSEEEG00000011861) ENSEEEG00000011859 ca14 (ENSEEEG00000011858) taf2 (ENSEEEG00000011482) ENSEEEG00000011477 enpp2 (ENSEEEG00000011475) ENSEEEG00000011474 cluap1 (ENSEEEG00000011471) NLRC3 (ENSEEEG00000011464) ENSEEEG00000011461 ENSEEEG00000011459 SBK1 (ENSEEEG00000011458) Channel catfish MODERN SPECIES ENSIPUG00000000580 ENSIPUG00000000582 ENSIPUG00000000585 ENSIPUG00000000591 ENSIPUG00000000594 ENSIPUG00000000600 ENSIPUG00000000610 ENSIPUG00000000617 ENSIPUG00000000620 ENSIPUG00000000623 CCR8 (ENSIPUG00000000625) ENSIPUG00000000629 ENSIPUG00000000635 ENSIPUG00000000643 ENSIPUG00000000668 ##21 DNAH5 (ENSIPUG00000000709) #22 Adcy2 (ENSIPUG00000000788) TENT4A (ENSIPUG00000000878) PRPF3 (ENSIPUG00000000902) ENSIPUG00000001009 ENSIPUG00000000997 ENSIPUG00000001016 ice1 (ENSIPUG00000001024) ca14 (ENSIPUG00000001038) taf2 (ENSIPUG00000001047) ENPP2 (ENSIPUG00000001082) ENSIPUG00000001113 Pdcd6 (ENSIPUG00000001129) si:ch211-196f5.2 (ENSIPUG00000001166) ipo4 (ENSIPUG00000001185) nanog (ENSIPUG00000001246) Cyprinoidei ANCESTRAL SPECIES 86 ENSGT00940000159099 ENSGT00390000012832 ENSGT00390000016277.a.k ENSGT00940000157537 ENSGT00940000155365.a.a ENSGT00940000160695 ENSGT00420000029769.a ENSGT01100000263542.A ENSGT00940000156004 ENSGT00940000155909.o.a ENSGT00530000063608.A ENSGT01020000230359.A ENSGT01020000230359.B.b ENSGT01020000230359.B.a ENSGT00940000154766.b ##21 ENSGT00940000155533.d #22 ENSGT00940000156424.a ENSGT00940000157811.b.a ENSGT00950000183199.b ENSGT00390000011497 ENSGT00390000018360.a ENSGT00940000157873.c ENSGT00390000018878 ENSGT00940000156893 ENSGT00390000002049.d ENSGT01030000234542.b.b.a.a.a.a ENSGT00940000157006.m ENSGT00390000000420 ENSGT00940000155778.B ENSGT00940000159514 ENSGT00940000159374 Zebrafish MODERN SPECIES 7 trim71 (ENSDARG00000075593) TCAIM (ENSDARG00000079881) ano10a (ENSDARG00000057736) snrka (ENSDARG00000070832) pomgnt2 (ENSDARG00000010941) GASK1A (ENSDARG00000076862) entpd3 (ENSDARG00000035309) ddc (ENSDARG00000016494) GRB10 (ENSDARG00000035308) cobl (ENSDARG00000091006) ENSDARG00000079829 ENSDARG00000105363 ENSDARG00000105467 CCR8 (ENSDARG00000086616) ENSDARG00000000370 ##21 DNAH5 (ENSDARG00000087373) #22 ADCY2 (ENSDARG00000058392) ice1 (ENSDARG00000058461) ENSDARG00000095789 prpf3 (ENSDARG00000086425) ENSDARG00000078162 ca14 (ENSDARG00000061697) taf2 (ENSDARG00000102307) enpp2 (ENSDARG00000011257) mal2 (ENSDARG00000077637) COLEC10 (ENSDARG00000104752) ENSDARG00000105239 pip5k1ab (ENSDARG00000024642) psmd4b (ENSDARG00000023279) vamp1b (ENSDARG00000097576) ENSDARG00000058351 Cyprininae DUPLICATION Cyprininae DUPLICATION Cyprininae ANCESTRAL SPECIES 195 ENSGT00390000001827.g ENSGT00940000159099.p ENSGT00390000012832.v ENSGT00390000016277.a.k.l ENSGT00940000157537.s ENSGT00940000155365.a.a.d ENSGT00940000160695.b ENSGT00420000029769.a.l ENSGT01100000263542.A.b ENSGT00940000156004.l ENSGT00940000155909.o.a.f ENSGT01020000230359.A.y.b ENSGT01020000230359.B.b.n ENSGT01020000230359.B.a.i.a.b ENSGT00940000154766.b.b ##21 ENSGT00940000155533.d.z.a #22 ENSGT00940000156424.a.a.b Cyprininae_a ANCESTRAL SPECIES 6 ENSGT00390000001827.g ENSGT00940000159099.p ENSGT00390000012832.v ENSGT00390000016277.a.k.l ENSGT00940000157537.s ENSGT00940000155365.a.a.d ENSGT00940000160695.b ENSGT00420000029769.a.l ENSGT01100000263542.A.b ENSGT00940000156004.l ENSGT00940000155909.o.a.f ENSGT01020000230359.A.y.b ENSGT01020000230359.B.b.n ENSGT01020000230359.B.a.i.a.b ENSGT00940000154766.b.b ##21 ENSGT00940000155533.d.z.a #22 ENSGT00940000156424.a.a.b Common carp reference MODERN SPECIES 2 trim71 (ENSCCRG00000063964) TCAIM (ENSCCRG00000012541) ABHD5 (ENSCCRG00000078272) ano10a (ENSCCRG00000051204) snrka (ENSCCRG00000014819) ENSCCRG00000069750 pomgnt2 (ENSCCRG00000076592) GASK1A (ENSCCRG00000016173) entpd3 (ENSCCRG00000075484) ENSCCRG00000066315 ddc (ENSCCRG00000016182) ENSCCRG00000061927 ENSCCRG00000011347 ENSCCRG00000043355 ENSCCRG00000002681 ##21 ENSCCRG00000027590 #22 ENSCCRG00000056647 ENSCCRG00000037006 ENSCCRG00000059157 ENSCCRG00000028204 ENSCCRG00000073712 ENSCCRG00000056601 ENSCCRG00000047414 CDKAL1 (ENSCCRG00000069132) sox4b (ENSCCRG00000079285) ENSCCRG00000053216 ENSCCRG00000075344 nrsn1 (ENSCCRG00000066162) DCDC2 (ENSCCRG00000057874) slc6a3 (ENSCCRG00000069101) ENSCCRG00000062725 Golden-line barbel MODERN SPECIES 309 trim71 (ENSSGRG00000035977) TCAIM (ENSSGRG00000035976) ABHD5 (ENSSGRG00000035973) ano10a (ENSSGRG00000035968) snrka (ENSSGRG00000035965) pomgnt2 (ENSSGRG00000035964) ENSSGRG00000035963 entpd3 (ENSSGRG00000035960) ddc (ENSSGRG00000035834) GRB10 (ENSSGRG00000035822) ENSSGRG00000035812 ENSSGRG00000035811 CCR8 (ENSSGRG00000035809) ENSSGRG00000035808 ENSSGRG00000031892 ##21 DNAH5 (ENSSGRG00000031844) #22 Goldfish MODERN SPECIES 3484 DNAH5 (ENSCARG00000066325) #22 Cyprininae ANCESTRAL SPECIES 1462 ENSGT00940000155533.d.z.b #22 ENSGT00940000156424.a.b Cyprininae_a ANCESTRAL SPECIES 1109 ENSGT00940000155533.d.z.b #22 ENSGT00940000156424.a.b Golden-line barbel MODERN SPECIES 417 TCAIM (ENSSGRG00000017169) ABHD5 (ENSSGRG00000017167) ano10a (ENSSGRG00000016773) snrka (ENSSGRG00000016764) pomgnt2 (ENSSGRG00000016763) pomgnt2 (ENSSGRG00000016762) GASK1A (ENSSGRG00000016761) entpd3 (ENSSGRG00000016760) ddc (ENSSGRG00000016729) GRB10 (ENSSGRG00000015833) cobl (ENSSGRG00000015820) CX3CR1 (ENSSGRG00000015819) CCR8 (ENSSGRG00000015818) CCR8 (ENSSGRG00000015817) ENSSGRG00000015701 ##21 ENSSGRG00000015691 #22 ADCY2 (ENSSGRG00000015615) ENSSGRG00000015612 Cyprininae ANCESTRAL SPECIES 292 ENSGT00940000159099.q ENSGT00390000012832.u ENSGT00390000016277.a.k.k ENSGT00940000157537.t ENSGT00940000155365.a.a.c ENSGT00940000160695.a ENSGT00420000029769.a.k ENSGT01100000263542.A.a ENSGT00940000156004.k ENSGT00940000155909.o.a.e ENSGT00530000063608.A ENSGT01020000230359.A.y.a ENSGT01020000230359.B.b.m ENSGT01020000230359.B.a.i.a.a ENSGT00940000154766.b.a ##21 ENSGT00940000155533.d.`b #22 ENSGT00940000156424.a.a.a ENSGT00940000157811.b.a ENSGT00950000183199.b ENSGT00390000011497.b ENSGT00390000018360.a ENSGT00940000164936.a ENSGT00940000156893.mb ENSGT01020000230359.B.a.i.b Goldfish MODERN SPECIES 7 trim71 (ENSCARG00000014476) TCAIM (ENSCARG00000014463) ABHD5 (ENSCARG00000014438) ano10a (ENSCARG00000014259) pomgnt2 (ENSCARG00000014223) snrka (ENSCARG00000014216) ENSCARG00000014208 entpd3 (ENSCARG00000014180) ddc (ENSCARG00000014053) GRB10 (ENSCARG00000012870) cobl (ENSCARG00000012774) ENSCARG00000012750 CCR8 (ENSCARG00000012742) CCR8 (ENSCARG00000012739) ENSCARG00000004137 ##21 ENSCARG00000003419 #22 ENSCARG00000003417 ADCY2 (ENSCARG00000002599) steap4 (ENSCARG00000002506) ENSCARG00000002483 ENSCARG00000002470 glipr2l (ENSCARG00000002459) TMEM67 (ENSCARG00000002324) rbm12ba (ENSCARG00000002300) ENSCARG00000002292 tex10 (ENSCARG00000002213) erp44 (ENSCARG00000002081) stx17 (ENSCARG00000002041) nr4a3 (ENSCARG00000001995) paqr7b (ENSCARG00000027976) ENSCARG00000027854 Cyprininae_a ANCESTRAL SPECIES 184 ENSGT00940000159099.q ENSGT00390000012832.u ENSGT00390000016277.a.k.k ENSGT00940000157537.t ENSGT00940000155365.a.a.c ENSGT00940000160695.a ENSGT00420000029769.a.k ENSGT01100000263542.A.a ENSGT00940000156004.k ENSGT00940000155909.o.a.e ENSGT00530000063608.A ENSGT01020000230359.A.y.a ENSGT01020000230359.B.b.m ENSGT01020000230359.B.a.i.a.a ENSGT00940000154766.b.a ##21 ENSGT00940000155533.d.`b #22 ENSGT00940000156424.a.a.a ENSGT00940000157811.b.a ENSGT00950000183199.b ENSGT00390000011497.b ENSGT00390000018360.a ENSGT00940000156893.mb ENSGT01020000230359.B.a.i.b ENSGT00390000000420 Common carp reference MODERN SPECIES 47 cnot10 (ENSCCRG00000051108) trim71 (ENSCCRG00000074866) ENSCCRG00000028921 snrka (ENSCCRG00000073103) ABHD5 (ENSCCRG00000051222) ano10a (ENSCCRG00000069517) pomgnt2 (ENSCCRG00000078667) GASK1A (ENSCCRG00000082810) entpd3 (ENSCCRG00000018339) ddc (ENSCCRG00000022014) ENSCCRG00000077123 cobl (ENSCCRG00000022649) ENSCCRG00000028569 ENSCCRG00000018516 ENSCCRG00000037038 ##21 ENSCCRG00000058089 #22 ENSCCRG00000027486 ENSCCRG00000060732 ENSCCRG00000004176 ENSCCRG00000054903 prpf3 (ENSCCRG00000028229) ca14 (ENSCCRG00000073224) ENSCCRG00000000786 ENSCCRG00000065962 ENSCCRG00000021581 ENSCCRG00000059401 ENSCCRG00000032799 ENSCCRG00000070793 CDKAL1 (ENSCCRG00000078434) sox4b (ENSCCRG00000064749) ENSCCRG00000055302 Elephant shark DUPLICATION Elephant shark MODERN SPECIES 1564 hoxa2b (ENSCMIG00000006841) hoxa1a (ENSCMIG00000006844) skap2 (ENSCMIG00000006845) snx10a (ENSCMIG00000006847) cbx3a (ENSCMIG00000006848) ENSCMIG00000006852 ENSCMIG00000006861 ENSCMIG00000006867 ENSCMIG00000006893 cycsb (ENSCMIG00000006898) OSBPL3 (ENSCMIG00000007003) gsdme (ENSCMIG00000007253) BCL2 (ENSCMIG00000007255) kdsr (ENSCMIG00000007261) VPS4B (ENSCMIG00000007311) ENSCMIG00000007470 #22 ENSCMIG00000007590 CFAP90 (ENSCMIG00000007612) adcy2b (ENSCMIG00000007660) TENT4A (ENSCMIG00000007824) srd5a1 (ENSCMIG00000007840) nsun2 (ENSCMIG00000007868) med10 (ENSCMIG00000007979) ENSCMIG00000007981 ADAMTS16 (ENSCMIG00000007997) Elephant shark MODERN SPECIES 1497 ENSCMIG00000019165 edc4 (ENSCMIG00000019113) nutf2 (ENSCMIG00000019042) pgls (ENSCMIG00000019039) ENSCMIG00000019038 ENSCMIG00000019036 ENSCMIG00000019028 ranbp10 (ENSCMIG00000018991) gfod2 (ENSCMIG00000018969) pard6a (ENSCMIG00000018966) ENSCMIG00000018963 ENSCMIG00000018960 ctcf (ENSCMIG00000018957) ripor1 (ENSCMIG00000018934) ENSCMIG00000018923 ENSCMIG00000018910 #22 tmem170a (ENSCMIG00000018883) cfdp1 (ENSCMIG00000018880) bcar1 (ENSCMIG00000018876) ENSCMIG00000018872 ENSCMIG00000018871 ENSCMIG00000018869 si:dkey-148a17.5 (ENSCMIG00000018868) esrp2 (ENSCMIG00000018852) NFATC3 (ENSCMIG00000018822) DUS2 (ENSCMIG00000018801) ddx28 (ENSCMIG00000018796) galr1b (ENSCMIG00000018793) ENSCMIG00000018787 SLC12A4 (ENSCMIG00000018294) ENSCMIG00000017951 Cyclostomata ANCESTRAL SPECIES ENSGT00940000155533.d #22 Hagfish MODERN SPECIES 499 ENSEBUG00000014251 ENSEBUG00000011120 ENSEBUG00000015340 ENSEBUG00000015195 ENSEBUG00000008204 ENSEBUG00000004529 ENSEBUG00000010930 ENSEBUG00000009575 ENSEBUG00000008581 ENSEBUG00000000443 ENSEBUG00000004250 gins2 (ENSEBUG00000014602) ENSEBUG00000012831 DNAH5 (ENSEBUG00000008466) #22 cpne2 (ENSEBUG00000002951) ENSEBUG00000010204 ENSEBUG00000010285 ENSEBUG00000010569 ENSEBUG00000002772 ENSEBUG00000005764 ENSEBUG00000000919 ENSEBUG00000007580 snrpb (ENSEBUG00000007467) ENSEBUG00000005238 ENSEBUG00000007006 exoc3 (ENSEBUG00000009024) ENSEBUG00000012639 Vertebrata DUPLICATION Vertebrata ANCESTRAL SPECIES ENSGT00940000155533.c.a ##22 Gnathostomata ANCESTRAL SPECIES ENSGT00940000155533.c.a ##22 Euteleostomi ANCESTRAL SPECIES ENSGT00940000155533.c.a ##22 Actinopterygii ANCESTRAL SPECIES ENSGT00940000155533.c.a ##22 Neopterygii ANCESTRAL SPECIES ENSGT00940000155533.c.a ##22 Osteoglossocephalai ANCESTRAL SPECIES ENSGT00940000155533.c.a ##22 Clupeocephala ANCESTRAL SPECIES ENSGT00940000155533.c.a ##22 Otomorpha ANCESTRAL SPECIES ENSGT00940000155533.c.a ##22 Clupeiformes ANCESTRAL SPECIES ENSGT00940000155533.c.a ##22 Atlantic herring MODERN SPECIES 2 nrsn1 (ENSCHAG00000010873) slc6a3 (ENSCHAG00000010885) LPCAT1 (ENSCHAG00000010974) irx4a (ENSCHAG00000011003) irx2a (ENSCHAG00000011016) irx1a (ENSCHAG00000011027) ADAMTS16 (ENSCHAG00000011060) cobl (ENSCHAG00000011205) ENSCHAG00000011277 ENSCHAG00000011308 ENSCHAG00000011328 ENSCHAG00000011344 CCR8 (ENSCHAG00000011352) ENSCHAG00000011361 ENSCHAG00000011435 ##21 DNAH5 (ENSCHAG00000013376) ##22 ADCY2 (ENSCHAG00000015587) ENSCHAG00000016139 pycr3 (ENSCHAG00000016190) nagpa (ENSCHAG00000016220) NDUFAF6 (ENSCHAG00000016235) plekhf2 (ENSCHAG00000016451) pimr50 (ENSCHAG00000016456) ENSCHAG00000016475 CFAP418 (ENSCHAG00000016493) ENSCHAG00000016505 ENSCHAG00000016702 slc6a19b (ENSCHAG00000016766) FHOD3 (ENSCHAG00000017110) rxrbb (ENSCHAG00000017392) rcvrn2 (ENSCHAG00000017412) Cyclostomata ANCESTRAL SPECIES ENSGT00940000155533.c.a ##22 Lamprey MODERN SPECIES 957 gmpr (ENSPMAG00000000720) cfap20 (ENSPMAG00000000714) mc1r (ENSPMAG00000000713) CSNK2A2 (ENSPMAG00000000691) nudt21 (ENSPMAG00000000684) ENSPMAG00000000673 ENSPMAG00000000670 ##22 Vertebrata ANCESTRAL SPECIES ENSGT00940000155533.c.b ##22 Cyclostomata ANCESTRAL SPECIES ENSGT00940000155533.c.b ##22 Lamprey MODERN SPECIES 2315 DNAH5 (ENSPMAG00000001214) ##22 Gnathostomata ANCESTRAL SPECIES ENSGT00940000155533.c.b ##22 Euteleostomi ANCESTRAL SPECIES ENSGT00940000155533.c.b ##22 Actinopterygii ANCESTRAL SPECIES ENSGT00940000155533.c.b ##22 Neopterygii ANCESTRAL SPECIES ENSGT00940000155533.c.b ##22 Osteoglossocephalai ANCESTRAL SPECIES ENSGT00940000155533.c.b ##22 Clupeocephala ANCESTRAL SPECIES ENSGT00940000155533.c.b ##22 Euteleosteomorpha ANCESTRAL SPECIES ENSGT00940000155533.c.b ##22 Acanthomorphata ANCESTRAL SPECIES ENSGT00940000155533.c.b ##22 Cod MODERN SPECIES 2 ENSGMOG00000025873 ENSGMOG00000003489 eomesb (ENSGMOG00000003675) ENSGMOG00000022807 azi2 (ENSGMOG00000003761) ENSGMOG00000029549 RBMS3 (ENSGMOG00000032451) entpd3 (ENSGMOG00000003928) ddc (ENSGMOG00000004282) ddc (ENSGMOG00000036492) ENSGMOG00000004480 cobl (ENSGMOG00000032107) ENSGMOG00000004653 ENSGMOG00000036436 ENSGMOG00000033263 ENSGMOG00000022719 ##22 ENSGMOG00000004768 ENSGMOG00000023662 ENSGMOG00000026013 ENSGMOG00000028748 ADAMTS16 (ENSGMOG00000005407) irx1a (ENSGMOG00000006669) ENSGMOG00000033032 irx2a (ENSGMOG00000033075) irx4a (ENSGMOG00000006681) ENSGMOG00000006686 slc6a3 (ENSGMOG00000006703) DCDC2 (ENSGMOG00000029908) nrsn1 (ENSGMOG00000026344) ENSGMOG00000031953 sox4b (ENSGMOG00000031834) Protacanthopterygii ANCESTRAL SPECIES ENSGT00940000155533.c.b ##22 Salmoninae ANCESTRAL SPECIES ENSGT00940000155533.c.b ##22 Huchen MODERN SPECIES 8176 ENSHHUG00000002493 ##22 Ciona ANCESTRAL SPECIES ENSGT00940000155533 #22 Ciona intestinalis DUPLICATION Ciona intestinalis DUPLICATION Ciona intestinalis DUPLICATION Ciona intestinalis MODERN SPECIES 50 ENSCING00000003142 ENSCING00000017701 ENSCING00000003086 ENSCING00000020020 ENSCING00000022033 #22 ENSCING00000019755 #22 ENSCING00000019366 #22 ENSCING00000018726 ENSCING00000021716 zf(c2hc)-2 (ENSCING00000003191) sep15 (ENSCING00000021137) ENSCING00000003175 ENSCING00000023577 ENSCING00000003166 ENSCING00000003121 ENSCING00000023021 Ciona intestinalis MODERN SPECIES 50 ENSCING00000003142 ENSCING00000017701 ENSCING00000003086 ENSCING00000020020 ENSCING00000022033 #22 ENSCING00000019755 #22 ENSCING00000019366 #22 ENSCING00000018726 ENSCING00000021716 zf(c2hc)-2 (ENSCING00000003191) sep15 (ENSCING00000021137) ENSCING00000003175 ENSCING00000023577 ENSCING00000003166 ENSCING00000003121 ENSCING00000023021 Ciona intestinalis MODERN SPECIES 50 ENSCING00000003142 ENSCING00000017701 ENSCING00000003086 ENSCING00000020020 ENSCING00000022033 #22 ENSCING00000019755 #22 ENSCING00000019366 #22 ENSCING00000018726 ENSCING00000021716 zf(c2hc)-2 (ENSCING00000003191) sep15 (ENSCING00000021137) ENSCING00000003175 ENSCING00000023577 ENSCING00000003166 ENSCING00000003121 ENSCING00000023021 Ciona intestinalis MODERN SPECIES 12 ENSCING00000022445 ENSCING00000022047 ENSCING00000013328 ENSCING00000013329 ENSCING00000010010 ENSCING00000013330 ENSCING00000013327 ENSCING00000019602 ENSCING00000018822 ENSCING00000008008 ENSCING00000016347 ENSCING00000008012 ENSCING00000008010 ENSCING00000019133 ENSCING00000008072 ENSCING00000024018 #22 ENSCING00000008030 ENSCING00000024403 ENSCING00000008025 ENSCING00000013324 ENSCING00000019722 ENSCING00000013325 ENSCING00000008020 ENSCING00000023036 ENSCING00000021815 ENSCING00000008016 ENSCING00000008073 ENSCING00000017927 ENSCING00000024965 ENSCING00000024187 ENSCING00000000567