Chordata ANCESTRAL SPECIES ENSGT00720000108833 #22 Vertebrata ANCESTRAL SPECIES 795 ENSGT00720000108833 #22 ENSGT00950000182976.a.a Gnathostomata ANCESTRAL SPECIES ENSGT00720000108833 #22 Euteleostomi ANCESTRAL SPECIES 489 ENSGT00500000045001 #14 ENSGT00390000015968 ENSGT00600000084428.b #21 ENSGT00940000154572 #17 ENSGT00940000157710 #15 ENSGT00390000018647 ENSGT00940000157835 ENSGT00720000108833 #22 Sarcopterygii ANCESTRAL SPECIES 454 ENSGT00500000045001 #14 ENSGT00390000015968 ENSGT00600000084428.b #21 ENSGT00940000154572 #17 ENSGT00940000157710 #15 ENSGT00390000018647 ENSGT00940000157835 ENSGT00720000108833 #22 Tetrapoda ANCESTRAL SPECIES 5 ENSGT00500000045001 #14 ENSGT00390000015968 ENSGT00600000084428.b #21 ENSGT00940000154572 #17 ENSGT00940000157710 #15 ENSGT00390000018647 ENSGT00940000157835 ENSGT00720000108833 #22 ENSGT00950000182976.a.a ENSGT00880000138031 #23 ENSGT00940000158187 #24 ENSGT00940000158037 #25 ENSGT00940000159389 #26 ENSGT00940000158600 #27 ENSGT00940000155166.A #28 ENSGT00390000016813 #30 ENSGT00940000155118 #31 ENSGT00940000155067.a #32 ENSGT00940000158254 #33 ENSGT00950000183117.a.a #34 ENSGT00390000000062 #35 ENSGT00390000006747 #36 ENSGT01030000234578.B.a #37 Amniota ANCESTRAL SPECIES 5 ENSGT00390000008645 ENSGT00390000009047.b ENSGT00940000156375 ENSGT00940000157129 #7 ENSGT00940000155834 #8 ENSGT00940000162970 #9 ENSGT01030000235320 #10 ENSGT00940000162446 ENSGT00390000001561 #11 ENSGT00940000154098.a #12 ENSGT00390000008708 #13 ENSGT00500000045001 #14 ENSGT00940000157710 #15 ENSGT00940000154572 #17 ENSGT00600000084428.b #21 ENSGT00720000108833 #22 ENSGT00950000182976.a.a ENSGT00880000138031 #23 ENSGT00940000158187 #24 ENSGT00940000158037 #25 ENSGT00940000159389 #26 ENSGT00940000158600 #27 ENSGT00940000155166.A #28 ENSGT00390000016813 #30 ENSGT00940000155118 #31 ENSGT00940000155067.a #32 ENSGT00940000158254 #33 ENSGT00950000183117.a.a #34 ENSGT00390000000062 #35 ENSGT00390000006747 #36 ENSGT01030000234578.B.a #37 Mammalia ANCESTRAL SPECIES 8 ENSGT00390000008645 ENSGT00390000009047.b ENSGT00940000156375 ENSGT00940000157129 #7 ENSGT00940000155834 #8 ENSGT00940000162970 #9 ENSGT01030000235320 #10 ENSGT00940000162446 ENSGT00390000001561 #11 ENSGT00940000154098.a.d #12 ENSGT00390000008708 #13 ENSGT00500000045001 #14 ENSGT00940000157710 #15 ENSGT00940000154572 #17 ENSGT00600000084428.b #21 ENSGT00720000108833 #22 ENSGT00950000182976.a.a ENSGT00880000138031 #23 ENSGT00940000158187 #24 ENSGT00940000158037 #25 ENSGT00940000159389 #26 ENSGT00940000158600 #27 ENSGT00940000155166.A #28 ENSGT00390000016813 #30 ENSGT00940000155118 #31 ENSGT00940000155067.a #32 ENSGT00940000158254 #33 ENSGT00950000183117.a.a #34 ENSGT00390000000062 #35 ENSGT00390000006747 #36 ENSGT01030000234578.B.a #37 Theria ANCESTRAL SPECIES 2 ENSGT00390000008645 ENSGT00390000009047.b ENSGT00940000156375 ENSGT00940000157129 #7 ENSGT00940000155834 #8 ENSGT00940000162970 #9 ENSGT01030000235320 #10 ENSGT00940000162446 ENSGT00390000001561 #11 ENSGT00940000154098.a.d #12 ENSGT00390000008708 #13 ENSGT00500000045001 #14 ENSGT00940000157710 #15 ENSGT00940000154572 #17 ENSGT00600000084428.b #21 ENSGT00720000108833 #22 ENSGT00950000182976.a.a ENSGT00880000138031 #23 ENSGT00940000158187 #24 ENSGT00940000158037 #25 ENSGT00940000159389 #26 ENSGT00940000158600 #27 ENSGT00940000155166.A #28 ENSGT00390000016813 #30 ENSGT00900000143486 ENSGT00940000155118 #31 ENSGT00940000155067.a #32 ENSGT00940000158254 #33 ENSGT00950000183117.a.a #34 ENSGT00390000000062 #35 ENSGT00390000006747 #36 Eutheria ANCESTRAL SPECIES 1 ENSGT00390000008645 ENSGT00390000009047.b ENSGT00940000156375 ENSGT00940000157129 #7 ENSGT00940000155834 #8 ENSGT00940000162970 #9 ENSGT01030000235320 #10 ENSGT00940000162446 ENSGT00390000001561 #11 ENSGT00940000154098.a.d #12 ENSGT00390000008708 #13 ENSGT00500000045001 #14 ENSGT00940000157710 #15 ENSGT00940000154572 #17 ENSGT00600000084428.b #21 ENSGT00720000108833 #22 ENSGT00950000182976.a.a ENSGT00880000138031 #23 ENSGT00940000158187 #24 ENSGT00940000158037 #25 ENSGT00940000159389 #26 ENSGT00940000158600 #27 ENSGT00940000155166.A #28 ENSGT00390000016813 #30 ENSGT00900000143486 ENSGT00940000155118 #31 ENSGT00940000155067.a #32 ENSGT00940000158254 #33 ENSGT00950000183117.a.a #34 ENSGT00390000000062.x.a #35 ENSGT00390000006747 #36 Boreoeutheria ANCESTRAL SPECIES 6 ENSGT00390000009047.b ENSGT00940000156375 ENSGT00940000157129 #7 ENSGT00940000155834 #8 ENSGT00940000162970 #9 ENSGT01030000235320 #10 ENSGT00940000162446 ENSGT00390000001561 #11 ENSGT00940000154098.a.d #12 ENSGT00390000008708 #13 ENSGT00500000045001 #14 ENSGT00940000157710 #15 ENSGT00940000154572.`c #17 ENSGT00940000163320 #18 ENSGT00600000084428.b #21 ENSGT00720000108833 #22 ENSGT00950000182976.a.a ENSGT00880000138031 #23 ENSGT00940000158187 #24 ENSGT00940000158037 #25 ENSGT00940000159389 #26 ENSGT00940000158600 #27 ENSGT00940000155166.A #28 ENSGT00390000016813 #30 ENSGT00900000143486 ENSGT00940000155118 #31 ENSGT00940000155067.a #32 ENSGT00940000158254 #33 ENSGT00950000183117.a.a #34 ENSGT00390000000062.x.a #35 ENSGT00390000006747 #36 Euarchontoglires ANCESTRAL SPECIES 6 ENSGT00390000009047.b ENSGT00940000156375 ENSGT00940000157129 #7 ENSGT00940000155834 #8 ENSGT00940000162970 #9 ENSGT00940000164546 ENSGT00940000162446 ENSGT00390000001561 #11 ENSGT00940000154098.a.d #12 ENSGT00390000008708 #13 ENSGT00500000045001 #14 ENSGT00940000157710 #15 ENSGT00940000154572.`c #17 ENSGT00940000163320 #18 ENSGT00600000084428.b #21 ENSGT00720000108833 #22 ENSGT00950000182976.a.a ENSGT00880000138031 #23 ENSGT00940000158187 #24 ENSGT00940000158037 #25 ENSGT00940000159389 #26 ENSGT00940000158600 #27 ENSGT00940000155166.A #28 ENSGT00390000016813 #30 ENSGT00900000143486 ENSGT00940000155118 #31 ENSGT00940000155067.a #32 ENSGT00940000158254 #33 ENSGT00950000183117.a.a #34 ENSGT00390000000062.x.a #35 ENSGT00390000006747 #36 Euarchontoglires_A ANCESTRAL SPECIES 5 ENSGT00390000009047.b ENSGT00940000156375 ENSGT00940000157129 #7 ENSGT00940000155834 #8 ENSGT00940000162970 #9 ENSGT00940000164546 ENSGT00940000162446 ENSGT00390000001561 #11 ENSGT00940000154098.a.d #12 ENSGT00390000008708 #13 ENSGT00500000045001 #14 ENSGT00940000157710 #15 ENSGT00940000154572.`c #17 ENSGT00940000163320 #18 ENSGT00600000084428.b #21 ENSGT00720000108833 #22 ENSGT00950000182976.a.a ENSGT00880000138031 #23 ENSGT00940000158187 #24 ENSGT00940000158037 #25 ENSGT00940000159389 #26 ENSGT00940000158600 #27 ENSGT00940000155166.A #28 ENSGT00390000016813 #30 ENSGT00900000143486 ENSGT00940000155118 #31 ENSGT00940000155067.a #32 ENSGT00940000158254 #33 ENSGT00950000183117.a.a #34 ENSGT00390000000062.x.a #35 ENSGT00390000006747 #36 Glires ANCESTRAL SPECIES 4 ENSGT00390000009047.b ENSGT00940000156375 ENSGT00940000157129 #7 ENSGT00940000155834 #8 ENSGT00940000162970 #9 ENSGT00940000164546 ENSGT00940000162446 ENSGT00390000001561 #11 ENSGT00940000154098.a.d #12 ENSGT00390000008708 #13 ENSGT00500000045001 #14 ENSGT00940000157710 #15 ENSGT00940000154572.`c #17 ENSGT00940000163320 #18 ENSGT00600000084428.b #21 ENSGT00720000108833 #22 ENSGT00950000182976.a.a ENSGT00880000138031 #23 ENSGT00940000158187 #24 ENSGT00940000158037 #25 ENSGT00940000159389 #26 ENSGT00940000158600 #27 ENSGT00940000155166.A #28 ENSGT00390000016813 #30 ENSGT00900000143486 ENSGT00940000155118 #31 ENSGT00940000155067.a #32 ENSGT00940000158254 #33 ENSGT00950000183117.a.a #34 ENSGT00390000000062.x.a #35 ENSGT00390000006747 #36 Rodentia ANCESTRAL SPECIES 5 ENSGT00390000009047.b ENSGT00940000156375 ENSGT00940000157129 #7 ENSGT00940000155834 #8 ENSGT00940000162970 #9 ENSGT00940000164546 ENSGT00940000162446 ENSGT00390000001561 #11 ENSGT00940000154098.a.d #12 ENSGT00390000008708 #13 ENSGT00500000045001 #14 ENSGT00940000157710 #15 ENSGT00940000154572.`c #17 ENSGT00940000163320 #18 ENSGT00600000084428.b #21 ENSGT00720000108833 #22 ENSGT00880000138031 #23 ENSGT00940000158187 #24 ENSGT00940000158037 #25 ENSGT00940000159389 #26 ENSGT00940000158600 #27 ENSGT00940000155166.A #28 ENSGT00390000016813 #30 ENSGT00940000155118 #31 ENSGT00940000155067.a #32 ENSGT00940000158254 #33 ENSGT00950000183117.a.a #34 ENSGT00390000000062.x.a #35 ENSGT00390000006747 #36 ENSGT01030000234578.B.a #37 ENSGT00390000014084 Rodentia_A ANCESTRAL SPECIES 4 ENSGT00390000009047.b ENSGT00940000156375 ENSGT00940000157129 #7 ENSGT00940000155834 #8 ENSGT00940000162970 #9 ENSGT00940000164546 ENSGT00940000162446 ENSGT00390000001561 #11 ENSGT00940000154098.a.d #12 ENSGT00390000008708 #13 ENSGT00500000045001 #14 ENSGT00940000157710 #15 ENSGT00940000154572.`c #17 ENSGT00940000163320 #18 ENSGT00600000084428.b #21 ENSGT00720000108833 #22 ENSGT00880000138031 #23 ENSGT00940000158187 #24 ENSGT00940000158037 #25 ENSGT00940000159389 #26 ENSGT00940000158600 #27 ENSGT00940000155166.A #28 ENSGT00390000016813 #30 ENSGT00940000155118 #31 ENSGT00940000155067.a #32 ENSGT00940000158254 #33 ENSGT00950000183117.a.a #34 ENSGT00390000000062.x.a #35 ENSGT00390000006747 #36 ENSGT01030000234578.B.a #37 ENSGT00390000014084 Sciuridae ANCESTRAL SPECIES 14 ENSGT00390000009047.b ENSGT00940000156375 ENSGT00940000157129 #7 ENSGT00940000155834 #8 ENSGT00940000162970 #9 ENSGT00940000164546 ENSGT00940000162446 ENSGT00390000001561 #11 ENSGT00940000154098.a.d #12 ENSGT00390000008708 #13 ENSGT00500000045001 #14 ENSGT00940000157710 #15 ENSGT00940000154572.`c #17 ENSGT00940000163320 #18 ENSGT00600000084428.b #21 ENSGT00720000108833 #22 ENSGT00880000138031 #23 ENSGT00940000158187 #24 ENSGT00940000158037 #25 ENSGT00940000159389 #26 ENSGT00940000158600 #27 ENSGT00940000155166.A #28 ENSGT00390000016813 #30 ENSGT00940000155118 #31 ENSGT00940000155067.a #32 ENSGT00940000158254 #33 ENSGT00950000183117.a.a #34 ENSGT00390000000062.x.a #35 ENSGT00390000006747 #36 ENSGT01030000234578.B.a #37 ENSGT00390000014084 Eurasian red squirrel MODERN SPECIES 14 ELK3 (ENSSVLG00005005685) #7 ENSSVLG00005005745 #8 ENSSVLG00005005778 #9 ENSSVLG00005005829 #10 NEDD1 (ENSSVLG00005005868) #11 ENSSVLG00005006011 #12 ENSSVLG00005006115 #13 IKBIP (ENSSVLG00005006279) #14 APAF1 (ENSSVLG00005006518) #15 ENSSVLG00005007229 #16 ANKS1B (ENSSVLG00005007585) #17 GARIN6 (ENSSVLG00005008609) #18 ENSSVLG00005008635 #19 ENSSVLG00005008665 #20 BLTP3B (ENSSVLG00005008712) #21 ACTR6 (ENSSVLG00005008778) #22 ENSSVLG00005008897 #23 SLC17A8 (ENSSVLG00005009180) #24 NR1H4 (ENSSVLG00005009339) #25 GAS2L3 (ENSSVLG00005009544) #26 ANO4 (ENSSVLG00005009692) #27 SLC5A8 (ENSSVLG00005010200) #28 ENSSVLG00005010295 #29 UTP20 (ENSSVLG00005010358) #30 ARL1 (ENSSVLG00005007015) #31 ENSSVLG00005007121 #32 MYBPC1 (ENSSVLG00005007401) #33 CHPT1 (ENSSVLG00005008570) #34 SYCP3 (ENSSVLG00005008597) #35 GNPTAB (ENSSVLG00005008675) #36 DRAM1 (ENSSVLG00005008749) #37 Marmotini ANCESTRAL SPECIES 4 ENSGT00390000009047.b ENSGT00940000156375 ENSGT00940000157129 #7 ENSGT00940000155834 #8 ENSGT00940000162970 #9 ENSGT00940000164546 ENSGT00940000162446 ENSGT00390000001561 #11 ENSGT00940000154098.a.d #12 ENSGT00390000008708 #13 ENSGT00500000045001 #14 ENSGT00940000157710 #15 ENSGT00940000154572.`c #17 ENSGT00940000163320 #18 ENSGT00600000084428.b #21 ENSGT00720000108833 #22 ENSGT00880000138031 #23 ENSGT00940000158187 #24 ENSGT00940000158037 #25 ENSGT00940000159389 #26 ENSGT00940000158600 #27 ENSGT00940000155166.A #28 ENSGT00390000016813 #30 ENSGT00940000155118 #31 ENSGT00940000155067.a.e #32 ENSGT00940000158254 #33 ENSGT00950000183117.a.a #34 ENSGT00390000000062.x.a #35 ENSGT00390000006747 #36 ENSGT01030000234578.B.a #37 ENSGT00390000014084 Alpin marmot MODERN SPECIES 11 HAL (ENSMMMG00000020025) LTA4H (ENSMMMG00000020008) ELK3 (ENSMMMG00000020001) #7 CDK17 (ENSMMMG00000019989) #8 ENSMMMG00000019968 #9 ENSMMMG00000019958 NEDD1 (ENSMMMG00000019953) #11 ENSMMMG00000019863 #12 SLC25A3 (ENSMMMG00000019846) #13 IKBIP (ENSMMMG00000019840) #14 APAF1 (ENSMMMG00000019774) #15 ENSMMMG00000019768 GARIN6 (ENSMMMG00000019762) #18 ANKS1B (ENSMMMG00000018366) #17 BLTP3B (ENSMMMG00000018268) #21 ACTR6 (ENSMMMG00000018236) #22 SCYL2 (ENSMMMG00000018205) #23 SLC17A8 (ENSMMMG00000018190) #24 NR1H4 (ENSMMMG00000018110) #25 GAS2L3 (ENSMMMG00000018095) #26 ANO4 (ENSMMMG00000017942) #27 SLC5A8 (ENSMMMG00000017894) #28 UTP20 (ENSMMMG00000017841) #30 ARL1 (ENSMMMG00000017821) #31 SPIC (ENSMMMG00000017812) #32 MYBPC1 (ENSMMMG00000017763) #33 CHPT1 (ENSMMMG00000017731) #34 SYCP3 (ENSMMMG00000017715) #35 GNPTAB (ENSMMMG00000017694) #36 DRAM1 (ENSMMMG00000017688) #37 WASHC3 (ENSMMMG00000017678) Marmotini_b ANCESTRAL SPECIES 3 ENSGT00940000153110.B ENSGT00390000008645 ENSGT00390000009047.b ENSGT00940000156375 ENSGT00940000157129 #7 ENSGT00940000155834 #8 ENSGT00940000162446 ENSGT00390000001561 #11 ENSGT00940000154098.a.d #12 ENSGT00390000008708 #13 ENSGT00500000045001 #14 ENSGT00940000157710 #15 ENSGT00940000154572.`c #17 ENSGT00940000163320 #18 ENSGT00600000084428.b #21 ENSGT00720000108833 #22 ENSGT00880000138031 #23 ENSGT00940000158187 #24 ENSGT00940000158037 #25 ENSGT00940000159389 #26 ENSGT00940000158600 #27 ENSGT00940000155166.A #28 ENSGT00390000016813 #30 ENSGT00940000155118 #31 ENSGT00940000155067.a.e #32 ENSGT00940000158254 #33 ENSGT00950000183117.a.a #34 ENSGT00390000000062.x.a #35 ENSGT00390000006747 #36 ENSGT01030000234578.B.a #37 ENSGT00390000014084 Squirrel MODERN SPECIES 92 TMPO (ENSSTOG00000009169) ##12 SLC25A3 (ENSSTOG00000027633) #13 IKBIP (ENSSTOG00000026100) #14 APAF1 (ENSSTOG00000028539) #15 ANKS1B (ENSSTOG00000012238) #17 BLTP3B (ENSSTOG00000004850) #21 ACTR6 (ENSSTOG00000004895) #22 SCYL2 (ENSSTOG00000011753) #23 SLC17A8 (ENSSTOG00000011763) #24 NR1H4 (ENSSTOG00000011771) #25 GAS2L3 (ENSSTOG00000011780) #26 ANO4 (ENSSTOG00000016283) #27 SLC5A8 (ENSSTOG00000016289) #28 UTP20 (ENSSTOG00000015995) #30 ARL1 (ENSSTOG00000016022) #31 ENSSTOG00000015457 #32 MYBPC1 (ENSSTOG00000003034) #33 CHPT1 (ENSSTOG00000011736) #34 SYCP3 (ENSSTOG00000001853) #35 GNPTAB (ENSSTOG00000001855) #36 DRAM1 (ENSSTOG00000001865) #37 WASHC3 (ENSSTOG00000029775) Arctic ground squirrel MODERN SPECIES 6 AMDHD1 (ENSUPAG00010006490) HAL (ENSUPAG00010006474) LTA4H (ENSUPAG00010006436) ELK3 (ENSUPAG00010006425) #7 ENSUPAG00010006422 CDK17 (ENSUPAG00010006388) #8 CFAP54 (ENSUPAG00010006280) NEDD1 (ENSUPAG00010006247) #11 ENSUPAG00010006109 #12 SLC25A3 (ENSUPAG00010006073) #13 IKBIP (ENSUPAG00010006055) #14 APAF1 (ENSUPAG00010006002) #15 GARIN6 (ENSUPAG00010005992) #18 ANKS1B (ENSUPAG00010003556) #17 BLTP3B (ENSUPAG00010003512) #21 ACTR6 (ENSUPAG00010003498) #22 SCYL2 (ENSUPAG00010003458) #23 SLC17A8 (ENSUPAG00010003443) #24 NR1H4 (ENSUPAG00010003387) #25 GAS2L3 (ENSUPAG00010003356) #26 ENSUPAG00010003346 ANO4 (ENSUPAG00010003185) #27 SLC5A8 (ENSUPAG00010003154) #28 UTP20 (ENSUPAG00010003081) #30 ARL1 (ENSUPAG00010003075) #31 MYBPC1 (ENSUPAG00010002997) #33 CHPT1 (ENSUPAG00010002983) #34 SYCP3 (ENSUPAG00010002966) #35 GNPTAB (ENSUPAG00010002938) #36 DRAM1 (ENSUPAG00010002927) #37 WASHC3 (ENSUPAG00010002918) Hystricomorpha ANCESTRAL SPECIES 9 ENSGT00940000154818.a.b ENSGT00940000153110.B ENSGT00390000008645 ENSGT00390000009047.b ENSGT00940000156375 ENSGT00940000157129 #7 ENSGT00940000155834 #8 ENSGT00940000162446 ENSGT00390000001561 #11 ENSGT00940000154098.a.d #12 ENSGT00390000008708 #13 ENSGT00500000045001 #14 ENSGT00940000157710 #15 ENSGT00940000154572.`c #17 ENSGT00600000084428.b #21 ENSGT00720000108833 #22 ENSGT00880000138031 #23 ENSGT00940000158187 #24 ENSGT00940000158037 #25 ENSGT00940000159389 #26 ENSGT00940000158600 #27 ENSGT00940000155166.A #28 ENSGT00390000016813 #30 ENSGT00940000155118 #31 ENSGT00940000155067.a #32 ENSGT00940000158254 #33 ENSGT00950000183117.a.a #34 ENSGT00390000000062.x.a #35 ENSGT00390000006747 #36 ENSGT01030000234578.B.a #37 ENSGT00390000014084 Hystricomorpha_a ANCESTRAL SPECIES 7 ENSGT00940000154818.a.b ENSGT00940000153110.B ENSGT00390000008645 ENSGT00390000009047.b ENSGT00940000156375 ENSGT00940000157129 #7 ENSGT00940000155834 #8 ENSGT00940000162446 ENSGT00390000001561 #11 ENSGT00940000154098.a.d #12 ENSGT00390000008708 #13 ENSGT00500000045001 #14 ENSGT00940000157710 #15 ENSGT00940000154572.`c #17 ENSGT00600000084428.b #21 ENSGT00720000108833 #22 ENSGT00880000138031 #23 ENSGT00940000158187 #24 ENSGT00940000158037 #25 ENSGT00940000159389 #26 ENSGT00940000158600 #27 ENSGT00940000155166.A #28 ENSGT00390000016813 #30 ENSGT00940000155118 #31 ENSGT00940000155067.a #32 ENSGT00940000158254 #33 ENSGT00950000183117.a.a #34 ENSGT00390000000062.x.a #35 ENSGT00390000006747 #36 ENSGT01030000234578.B.a #37 ENSGT00390000014084 Guinea pig MODERN SPECIES 9 CCDC38 (ENSCPOG00000013904) AMDHD1 (ENSCPOG00000001031) HAL (ENSCPOG00000013043) LTA4H (ENSCPOG00000013048) ELK3 (ENSCPOG00000005065) #7 CDK17 (ENSCPOG00000005070) #8 CFAP54 (ENSCPOG00000009624) NEDD1 (ENSCPOG00000009631) #11 ENSCPOG00000004978 TMPO (ENSCPOG00000011604) ##12 SLC25A3 (ENSCPOG00000011606) #13 IKBIP (ENSCPOG00000040634) #14 APAF1 (ENSCPOG00000015196) #15 ANKS1B (ENSCPOG00000015197) #17 BLTP3B (ENSCPOG00000009379) #21 ACTR6 (ENSCPOG00000024022) #22 SCYL2 (ENSCPOG00000015459) #23 SLC17A8 (ENSCPOG00000009083) #24 NR1H4 (ENSCPOG00000002168) #25 GAS2L3 (ENSCPOG00000036868) #26 ANO4 (ENSCPOG00000008963) #27 SLC5A8 (ENSCPOG00000010055) #28 UTP20 (ENSCPOG00000003129) #30 ARL1 (ENSCPOG00000026014) #31 SPIC (ENSCPOG00000007301) #32 MYBPC1 (ENSCPOG00000011180) #33 CHPT1 (ENSCPOG00000001199) #34 SYCP3 (ENSCPOG00000001202) #35 GNPTAB (ENSCPOG00000022501) #36 ENSCPOG00000034099 #37 WASHC3 (ENSCPOG00000036997) Hystricomorpha_b ANCESTRAL SPECIES 13 ENSGT00940000154818.a.a ENSGT00940000153110.B ENSGT00390000008645 ENSGT00390000009047.b ENSGT00940000156375 ENSGT00940000157129 #7 ENSGT00940000155834 #8 ENSGT00940000162446 ENSGT00390000001561 #11 ENSGT00940000154098.a.d #12 ENSGT00390000008708 #13 ENSGT00500000045001 #14 ENSGT00940000157710 #15 ENSGT00940000154572.`c #17 ENSGT00600000084428.b #21 ENSGT00720000108833 #22 ENSGT00880000138031 #23 ENSGT00940000158187 #24 ENSGT00940000158037 #25 ENSGT00940000159389 #26 ENSGT00940000158600 #27 ENSGT00940000155166.A #28 ENSGT00390000016813 #30 ENSGT00940000155118.y.a #31 ENSGT00940000155067.a #32 ENSGT00940000158254 #33 ENSGT00950000183117.a.a #34 ENSGT00390000000062.x.a #35 ENSGT00390000006747 #36 ENSGT01030000234578.B.a #37 ENSGT00390000014084 Long-tailed chinchilla MODERN SPECIES 112 AMDHD1 (ENSCLAG00000010790) HAL (ENSCLAG00000009969) Lta4h (ENSCLAG00000011828) ELK3 (ENSCLAG00000014957) #7 CDK17 (ENSCLAG00000012821) #8 CFAP54 (ENSCLAG00000008151) NEDD1 (ENSCLAG00000013064) #11 ENSCLAG00000007083 TMPO (ENSCLAG00000007244) ##12 SLC25A3 (ENSCLAG00000007243) #13 IKBIP (ENSCLAG00000008628) #14 APAF1 (ENSCLAG00000009227) #15 ANKS1B (ENSCLAG00000009661) #17 ENSCLAG00000009179 BLTP3B (ENSCLAG00000012501) #21 ACTR6 (ENSCLAG00000007878) #22 SCYL2 (ENSCLAG00000010496) #23 SLC17A8 (ENSCLAG00000011320) #24 ENSCLAG00000015655 NR1H4 (ENSCLAG00000012775) #25 GAS2L3 (ENSCLAG00000007654) #26 ANO4 (ENSCLAG00000014090) #27 SLC5A8 (ENSCLAG00000009574) #28 UTP20 (ENSCLAG00000011569) #30 ARL1 (ENSCLAG00000008180) #31 SPIC (ENSCLAG00000016048) #32 MYBPC1 (ENSCLAG00000006936) #33 ENSCLAG00000012024 #34 SYCP3 (ENSCLAG00000006962) #35 GNPTAB (ENSCLAG00000007404) #36 DRAM1 (ENSCLAG00000008068) #37 Degu DUPLICATION Degu DUPLICATION Degu MODERN SPECIES 168 ENSODEG00000005475 SIPA1L2 (ENSODEG00000005861) NTPCR (ENSODEG00000004704) PCNX2 (ENSODEG00000004978) MAP3K21 (ENSODEG00000006318) KCNK1 (ENSODEG00000006201) ENSODEG00000019357 SLC35F3 (ENSODEG00000005836) ENSODEG00000005008 TARBP1 (ENSODEG00000005238) ENSODEG00000007350 IRF2BP2 (ENSODEG00000007656) ENSODEG00000005252 RBM34 (ENSODEG00000006130) ARID4B (ENSODEG00000005373) ENSODEG00000006205 #22 ENSODEG00000006253 ENSODEG00000007467 TBCE (ENSODEG00000007759) ENSODEG00000006722 GNG4 (ENSODEG00000005790) LYST (ENSODEG00000005832) NID1 (ENSODEG00000007141) GPR137B (ENSODEG00000005781) ERO1B (ENSODEG00000005305) EDARADD (ENSODEG00000008012) LGALS8 (ENSODEG00000006705) ENSODEG00000006801 ENSODEG00000005900 ACTN2 (ENSODEG00000006161) MTR (ENSODEG00000006892) Degu MODERN SPECIES 157 CASQ1 (ENSODEG00000007881) PEA15 (ENSODEG00000008919) ENSODEG00000008689 DCAF8 (ENSODEG00000008873) PEX19 (ENSODEG00000008129) ENSODEG00000019505 COPA (ENSODEG00000007358) NCSTN (ENSODEG00000007729) NHLH1 (ENSODEG00000007624) VANGL2 (ENSODEG00000007301) ENSODEG00000019372 ENSODEG00000019654 CD84 (ENSODEG00000007652) SLAMF1 (ENSODEG00000009203) ENSODEG00000008491 ENSODEG00000009874 #22 ENSODEG00000008141 ENSODEG00000009437 ENSODEG00000008083 ENSODEG00000007745 ENSODEG00000007561 ENSODEG00000007329 ENSODEG00000008250 #31 F11R (ENSODEG00000007564) ENSODEG00000008881 TSTD1 (ENSODEG00000010923) ENSODEG00000012848 ENSODEG00000012487 NECTIN4 (ENSODEG00000009227) KLHDC9 (ENSODEG00000008140) ENSODEG00000007376 Degu MODERN SPECIES 45 ENSODEG00000012494 ENSODEG00000010263 ENSODEG00000019742 ENSODEG00000019648 ENSODEG00000013377 #12 SLC25A3 (ENSODEG00000009995) #13 ENSODEG00000010948 #14 APAF1 (ENSODEG00000010122) #15 ENSODEG00000019813 ENSODEG00000010313 #17 ENSODEG00000010573 ENSODEG00000010991 ENSODEG00000010669 #17 ENSODEG00000011572 BLTP3B (ENSODEG00000010196) #21 ENSODEG00000010649 #22 ENSODEG00000011114 #23 SLC17A8 (ENSODEG00000010869) #24 NR1H4 (ENSODEG00000012027) #25 ENSODEG00000010407 #26 ENSODEG00000009780 ANO4 (ENSODEG00000011009) #27 ENSODEG00000010202 SLC5A8 (ENSODEG00000010696) #28 UTP20 (ENSODEG00000013411) #30 ENSODEG00000010531 #31 SPIC (ENSODEG00000010078) #32 ENSODEG00000010424 MYBPC1 (ENSODEG00000012077) #33 CHPT1 (ENSODEG00000011230) #34 SYCP3 (ENSODEG00000011961) #35 Naked mole-rat female DUPLICATION Naked mole-rat female DUPLICATION Naked mole-rat female MODERN SPECIES 8 ELK3 (ENSHGLG00000008439) #7 ENSHGLG00000006066 #8 CFAP54 (ENSHGLG00000004618) ENSHGLG00000011260 NEDD1 (ENSHGLG00000012733) #11 ENSHGLG00000037736 ENSHGLG00000032527 ENSHGLG00000010848 #12 ENSHGLG00000008601 #13 IKBIP (ENSHGLG00000047603) #14 ENSHGLG00000049820 APAF1 (ENSHGLG00000007198) #15 ENSHGLG00000016527 #17 ENSHGLG00000041800 #17 BLTP3B (ENSHGLG00000008977) #21 ACTR6 (ENSHGLG00000006255) #22 SCYL2 (ENSHGLG00000004458) #23 SLC17A8 (ENSHGLG00000004252) #24 NR1H4 (ENSHGLG00000038152) #25 ENSHGLG00000006370 ENSHGLG00000039506 ANO4 (ENSHGLG00000010936) #27 SLC5A8 (ENSHGLG00000008465) #28 ENSHGLG00000046315 #31 ENSHGLG00000044877 SPIC (ENSHGLG00000039584) #32 ENSHGLG00000050337 #33 ENSHGLG00000039302 ENSHGLG00000005709 #34 SYCP3 (ENSHGLG00000004845) #35 ENSHGLG00000034643 #36 Naked mole-rat female MODERN SPECIES 22 ENSHGLG00000009497 ENSHGLG00000039209 ENSHGLG00000035617 ENSHGLG00000015539 ENSHGLG00000015109 ENSHGLG00000047841 ENSHGLG00000045830 ENSHGLG00000042261 ENSHGLG00000009393 KYNU (ENSHGLG00000014874) ENSHGLG00000005612 ARHGAP15 (ENSHGLG00000018323) GTDC1 (ENSHGLG00000012745) ZEB2 (ENSHGLG00000018878) ENSHGLG00000007625 ENSHGLG00000033112 #22 ENSHGLG00000043585 ENSHGLG00000036243 ACVR2A (ENSHGLG00000046847) ORC4 (ENSHGLG00000035874) ENSHGLG00000042968 ENSHGLG00000012065 MBD5 (ENSHGLG00000000588) ENSHGLG00000045749 ENSHGLG00000042407 EPC2 (ENSHGLG00000001526) KIF5C (ENSHGLG00000002894) ENSHGLG00000003241 ENSHGLG00000020241 LYPD6B (ENSHGLG00000037498) ENSHGLG00000008540 Naked mole-rat female MODERN SPECIES 10 ENSHGLG00000004684 ENSHGLG00000045561 ENSHGLG00000049269 ENSHGLG00000007932 ENSHGLG00000006551 ENSHGLG00000032551 CCDC18 (ENSHGLG00000004402) ENSHGLG00000004219 FNBP1L (ENSHGLG00000033036) BCAR3 (ENSHGLG00000009405) ENSHGLG00000016483 GCLM (ENSHGLG00000049623) ABCA4 (ENSHGLG00000016293) ENSHGLG00000037982 ARHGAP29 (ENSHGLG00000013186) ENSHGLG00000012570 #22 ABCD3 (ENSHGLG00000009521) ENSHGLG00000034361 F3 (ENSHGLG00000008407) SLC44A3 (ENSHGLG00000010239) CNN3 (ENSHGLG00000008972) ALG14 (ENSHGLG00000008610) ENSHGLG00000007651 RWDD3 (ENSHGLG00000041595) ENSHGLG00000036777 ENSHGLG00000047422 ENSHGLG00000041535 ENSHGLG00000005205 ENSHGLG00000033443 ENSHGLG00000034783 ENSHGLG00000004138 Rodentia_B ANCESTRAL SPECIES 3 ENSGT00390000008645 ENSGT00390000009047.b ENSGT00940000156375 ENSGT00940000157129 #7 ENSGT00940000155834 #8 ENSGT00940000162970 #9 ENSGT00940000164546 ENSGT00940000162446 ENSGT00390000001561 #11 ENSGT00940000154098.a.d #12 ENSGT00390000008708 #13 ENSGT00500000045001 #14 ENSGT00940000157710 #15 ENSGT00940000154572.`c #17 ENSGT00600000084428.b #21 ENSGT00720000108833 #22 ENSGT00880000138031 #23 ENSGT00940000158187 #24 ENSGT00940000158037 #25 ENSGT00940000159389 #26 ENSGT00940000158600 #27 ENSGT00940000155166.A #28 ENSGT00390000016813 #30 ENSGT00940000155118 #31 ENSGT00940000155067.a #32 ENSGT00940000158254 #33 ENSGT00950000183117.a.a #34 ENSGT00390000000062.x.a #35 ENSGT00390000006747 #36 ENSGT01030000234578.B.a #37 ENSGT00390000014084 Kangaroo rat MODERN SPECIES 322 Elk3 (ENSDORG00000025916) #7 Cdk17 (ENSDORG00000014799) #8 ENSDORG00000025108 ENSDORG00000005572 #9 ENSDORG00000025279 ENSDORG00000026947 Nedd1 (ENSDORG00000001204) #11 ENSDORG00000027259 ENSDORG00000023396 ##12 Slc25a3 (ENSDORG00000011431) #13 Ikbip (ENSDORG00000011434) #14 Apaf1 (ENSDORG00000009253) #15 ENSDORG00000009254 #17 ENSDORG00000028031 #17 Uhrf1bp1l (ENSDORG00000024278) #21 Actr6 (ENSDORG00000012723) #22 ENSDORG00000003101 #23 Slc17a8 (ENSDORG00000029543) #24 Nr1h4 (ENSDORG00000001224) #25 ENSDORG00000001225 #26 Ano4 (ENSDORG00000001013) #27 Slc5a8 (ENSDORG00000013252) #28 Utp20 (ENSDORG00000014762) #30 Arl1 (ENSDORG00000014770) #31 Spic (ENSDORG00000003709) #32 Mybpc1 (ENSDORG00000004026) #33 Chpt1 (ENSDORG00000004030) #34 ENSDORG00000004032 #35 Gnptab (ENSDORG00000023503) #36 Dram1 (ENSDORG00000003107) #37 Washc3 (ENSDORG00000029910) Myomorpha ANCESTRAL SPECIES 2 ENSGT00390000008645 ENSGT00390000009047.b ENSGT00940000156375 ENSGT00940000157129 #7 ENSGT00940000155834 #8 ENSGT00940000162970 #9 ENSGT00940000164546 ENSGT00940000162446 ENSGT00390000001561 #11 ENSGT00940000154098.a.d #12 ENSGT00390000008708 #13 ENSGT00500000045001 #14 ENSGT00940000157710 #15 ENSGT00940000154572.`c #17 ENSGT00600000084428.b #21 ENSGT00720000108833 #22 ENSGT00880000138031 #23 ENSGT00940000158187 #24 ENSGT00940000158037 #25 ENSGT00940000159389 #26 ENSGT00940000158600 #27 ENSGT00940000155166.A #28 ENSGT00390000016813 #30 ENSGT00940000155118 #31 ENSGT00940000155067.a #32 ENSGT00940000158254 #33 ENSGT00950000183117.a.a #34 ENSGT00390000000062.x.a.b #35 ENSGT00390000006747 #36 ENSGT01030000234578.B.a #37 ENSGT00390000014084 Lesser Egyptian jerboa MODERN SPECIES 42 Amdhd1 (ENSJJAG00000010274) Hal (ENSJJAG00000010741) Lta4h (ENSJJAG00000011318) Elk3 (ENSJJAG00000010853) #7 Cdk17 (ENSJJAG00000013291) #8 ENSJJAG00000014966 #9 ENSJJAG00000017399 Nedd1 (ENSJJAG00000010994) #11 Tmpo (ENSJJAG00000018127) #12 Slc25a3 (ENSJJAG00000013339) #13 ENSJJAG00000017372 #14 Apaf1 (ENSJJAG00000014169) #15 ENSJJAG00000023848 #17 ENSJJAG00000018878 #17 Uhrf1bp1l (ENSJJAG00000023679) #21 Actr6 (ENSJJAG00000012412) #22 ENSJJAG00000014007 #23 Slc17a8 (ENSJJAG00000016274) #24 Nr1h4 (ENSJJAG00000017445) #25 ENSJJAG00000017605 #26 Ano4 (ENSJJAG00000021544) #27 Slc5a8 (ENSJJAG00000018761) #28 Utp20 (ENSJJAG00000019321) #30 ENSJJAG00000020719 #31 Mybpc1 (ENSJJAG00000020768) #33 ENSJJAG00000001967 #34 Sycp3 (ENSJJAG00000017653) #35 ENSJJAG00000022706 #36 Dram1 (ENSJJAG00000023953) #37 Washc3 (ENSJJAG00000019930) Nup37 (ENSJJAG00000018864) Muroidea ANCESTRAL SPECIES 5 ENSGT00390000008645 ENSGT00390000009047.b ENSGT00940000156375 ENSGT00940000157129 #7 ENSGT00940000155834 #8 ENSGT00940000162970 #9 ENSGT00940000164546 ENSGT00940000162446 ENSGT00390000001561 #11 ENSGT00940000154098.a.d #12 ENSGT00390000008708 #13 ENSGT00500000045001 #14 ENSGT00940000157710 #15 ENSGT00940000154572.`c #17 ENSGT00600000084428.b #21 ENSGT00720000108833 #22 ENSGT00880000138031 #23 ENSGT00940000158187 #24 ENSGT00940000158037 #25 ENSGT00940000159389 #26 ENSGT00940000158600 #27 ENSGT00940000155166.A #28 ENSGT00390000016813 #30 ENSGT00940000155118 #31 ENSGT00940000155067.a #32 ENSGT00940000158254 #33 ENSGT00950000183117.a.a #34 ENSGT00390000000062.x.a.b #35 ENSGT00390000006747 #36 ENSGT01030000234578.B.a #37 ENSGT00390000014084 Upper Galilee mountains blind mole rat MODERN SPECIES 1572 ENSNGAG00000017932 #17 Uhrf1bp1l (ENSNGAG00000016616) #21 Actr6 (ENSNGAG00000014912) #22 ENSNGAG00000014516 #23 ENSNGAG00000014156 Slc17a8 (ENSNGAG00000013808) #24 Muroidea_A ANCESTRAL SPECIES 22 ENSGT00390000008645 ENSGT00390000009047.b ENSGT00940000156375 ENSGT00940000157129 #7 ENSGT00940000155834 #8 ENSGT00940000162970 #9 ENSGT00940000164546 ENSGT00940000162446 ENSGT00390000001561 #11 ENSGT00940000154098.a.d #12 ENSGT00390000008708 #13 ENSGT00500000045001 #14 ENSGT00940000157710 #15 ENSGT00940000154572.`c #17 ENSGT00600000084428.b #21 ENSGT00720000108833 #22 ENSGT00880000138031 #23 ENSGT00940000158187 #24 ENSGT00940000158037 #25 ENSGT00940000159389 #26 ENSGT00940000158600 #27 ENSGT00940000155166.A #28 ENSGT00390000016813 #30 ENSGT00940000155118 #31 ENSGT00390000018318.u.b.a.b.a.a.b ENSGT00940000155067.a #32 ENSGT00940000158254 #33 ENSGT00950000183117.a.a #34 ENSGT00390000000062.x.a.b #35 ENSGT00390000006747 #36 ENSGT01030000234578.B.a #37 Murinae ANCESTRAL SPECIES 22 ENSGT00940000154818.a.a ENSGT00940000153110.B ENSGT00390000008645 ENSGT00390000009047.b ENSGT00940000156375 ENSGT00940000157129 #7 ENSGT00940000155834 #8 ENSGT00940000162446 ENSGT00390000001561 #11 ENSGT00940000154098.a.d #12 ENSGT00390000008708 #13 ENSGT00500000045001 #14 ENSGT00940000157710 #15 ENSGT00940000154572.`c #17 ENSGT00600000084428.b #21 ENSGT00720000108833 #22 ENSGT00880000138031 #23 ENSGT00940000158187 #24 ENSGT00940000158037 #25 ENSGT00940000159389 #26 ENSGT00940000158600 #27 ENSGT00940000155166.A #28 ENSGT00390000016813 #30 ENSGT00940000155118 #31 ENSGT00390000018318.u.b.a.b.a.a.b ENSGT00940000155067.a #32 ENSGT00940000158254 #33 ENSGT00950000183117.a.a #34 ENSGT00390000000062.x.a.b #35 ENSGT00390000006747 #36 ENSGT01030000234578.B.a #37 Mus ANCESTRAL SPECIES 23 ENSGT00940000154818.a.a ENSGT00940000153110.B ENSGT00390000008645 ENSGT00390000009047.b ENSGT00940000156375 ENSGT00940000157129 #7 ENSGT00940000155834 #8 ENSGT00940000162446 ENSGT00390000001561 #11 ENSGT00940000154098.a.d #12 ENSGT00390000008708 #13 ENSGT00500000045001 #14 ENSGT00940000157710 #15 ENSGT00940000154572.`c #17 ENSGT00600000084428.b #21 ENSGT00720000108833 #22 ENSGT00880000138031 #23 ENSGT00940000158187 #24 ENSGT00940000158037 #25 ENSGT00940000159389 #26 ENSGT00940000158600 #27 ENSGT00940000155166.A #28 ENSGT00390000016813 #30 ENSGT00940000155118 #31 ENSGT00940000155067.a #32 ENSGT00940000158254 #33 ENSGT00950000183117.a.a #34 ENSGT00390000000062.x.a.b #35 ENSGT00390000006747 #36 ENSGT01030000234578.B.a #37 ENSGT00390000014084 Mus_A ANCESTRAL SPECIES 11 ENSGT00940000154818.a.a ENSGT00940000153110.B ENSGT00390000008645 ENSGT00390000009047.b ENSGT00940000156375 ENSGT00940000157129 #7 ENSGT00940000155834 #8 ENSGT00940000162446 ENSGT00390000001561 #11 ENSGT00940000154098.a.d #12 ENSGT00390000008708 #13 ENSGT00500000045001 #14 ENSGT00940000157710 #15 ENSGT00940000154572.`c #17 ENSGT00600000084428.b #21 ENSGT00720000108833 #22 ENSGT00880000138031 #23 ENSGT00940000158187 #24 ENSGT00940000158037 #25 ENSGT00940000159389 #26 ENSGT00940000158600 #27 ENSGT00940000155166.A #28 ENSGT00390000016813 #30 ENSGT00940000155118 #31 ENSGT00940000155067.a #32 ENSGT00940000158254 #33 ENSGT00950000183117.a.a #34 ENSGT00390000000062.x.a.b #35 ENSGT00390000006747 #36 ENSGT01030000234578.B.a #37 ENSGT00390000014084 Mus_B ANCESTRAL SPECIES 10 ENSGT00940000154818.a.a ENSGT00940000153110.B ENSGT00390000008645 ENSGT00390000009047.b ENSGT00940000156375 ENSGT00940000157129 #7 ENSGT00940000155834 #8 ENSGT00940000162446 ENSGT00390000001561 #11 ENSGT00940000154098.a.d #12 ENSGT00390000008708 #13 ENSGT00500000045001 #14 ENSGT00940000157710 #15 ENSGT00940000154572.`c #17 ENSGT00600000084428.b #21 ENSGT00720000108833 #22 ENSGT00880000138031 #23 ENSGT00940000158187 #24 ENSGT00940000158037 #25 ENSGT00940000159389 #26 ENSGT00940000158600 #27 ENSGT00940000155166.A #28 ENSGT00390000016813 #30 ENSGT00940000155118 #31 ENSGT00940000155067.a #32 ENSGT00940000158254 #33 ENSGT00950000183117.a.a #34 ENSGT00390000000062.x.a.b #35 ENSGT00390000006747 #36 ENSGT01030000234578.B.a #37 ENSGT00390000014084 Mus_C ANCESTRAL SPECIES 7 ENSGT00940000154818.a.a ENSGT00940000153110.B ENSGT00390000008645 ENSGT00390000009047.b ENSGT00940000156375 ENSGT00940000157129 #7 ENSGT00940000155834 #8 ENSGT00940000162446 ENSGT00390000001561 #11 ENSGT00940000154098.a.d #12 ENSGT00390000008708 #13 ENSGT00500000045001 #14 ENSGT00940000157710 #15 ENSGT00940000154572.`c #17 ENSGT00600000084428.b #21 ENSGT00720000108833 #22 ENSGT00880000138031 #23 ENSGT00940000158187 #24 ENSGT00940000158037 #25 ENSGT00940000159389 #26 ENSGT00940000158600 #27 ENSGT00940000155166.A #28 ENSGT00390000016813 #30 ENSGT00940000155118 #31 ENSGT00940000155067.a #32 ENSGT00940000158254 #33 ENSGT00950000183117.a.a #34 ENSGT00390000000062.x.a.b #35 ENSGT00390000006747 #36 ENSGT01030000234578.B.a #37 ENSGT00390000014084 spretus MODERN SPECIES 1 Snrpf (MGP_SPRETEiJ_G0016553) Ccdc38 (MGP_SPRETEiJ_G0016552) Amdhd1 (MGP_SPRETEiJ_G0016551) Hal (MGP_SPRETEiJ_G0016550) Lta4h (MGP_SPRETEiJ_G0016549) Elk3 (MGP_SPRETEiJ_G0016548) #7 Cdk17 (MGP_SPRETEiJ_G0016547) #8 Cfap54 (MGP_SPRETEiJ_G0016546) Nedd1 (MGP_SPRETEiJ_G0016545) #11 Tmpo (MGP_SPRETEiJ_G0016544) #12 Slc25a3 (MGP_SPRETEiJ_G0016543) #13 Ikbip (MGP_SPRETEiJ_G0016542) #14 Apaf1 (MGP_SPRETEiJ_G0016541) #15 Anks1b (MGP_SPRETEiJ_G0016540) #17 Uhrf1bp1l (MGP_SPRETEiJ_G0016539) #21 Actr6 (MGP_SPRETEiJ_G0016538) #22 Scyl2 (MGP_SPRETEiJ_G0016537) #23 Slc17a8 (MGP_SPRETEiJ_G0016536) #24 Nr1h4 (MGP_SPRETEiJ_G0016535) #25 Gas2l3 (MGP_SPRETEiJ_G0016534) #26 Ano4 (MGP_SPRETEiJ_G0016533) #27 Slc5a8 (MGP_SPRETEiJ_G0016532) #28 Utp20 (MGP_SPRETEiJ_G0016531) #30 Arl1 (MGP_SPRETEiJ_G0016530) #31 Spic (MGP_SPRETEiJ_G0016529) #32 Mybpc1 (MGP_SPRETEiJ_G0016528) #33 MGP_SPRETEiJ_G0016527 #34 Sycp3 (MGP_SPRETEiJ_G0016526) #35 Gnptab (MGP_SPRETEiJ_G0016525) #36 Dram1 (MGP_SPRETEiJ_G0016524) #37 Washc3 (MGP_SPRETEiJ_G0016523) Steppe mouse MODERN SPECIES 2939 Uhrf1bp1l (ENSMSIG00000017125) #21 Actr6 (ENSMSIG00000017172) #22 Scyl2 (ENSMSIG00000017210) #23 Slc17a8 (ENSMSIG00000017267) #24 Nr1h4 (ENSMSIG00000017294) #25 Gas2l3 (ENSMSIG00000017395) #26 Ano4 (ENSMSIG00000017553) #27 Slc5a8 (ENSMSIG00000017818) #28 ENSMSIG00000017854 Utp20 (ENSMSIG00000017862) #30 ENSMSIG00000017985 ENSMSIG00000017992 Spic (ENSMSIG00000018013) #32 Mybpc1 (ENSMSIG00000018042) #33 Mouse MODERN SPECIES 1 Snrpf (ENSMUSG00000020018) Ccdc38 (ENSMUSG00000036168) Amdhd1 (ENSMUSG00000015890) Hal (ENSMUSG00000020017) Lta4h (ENSMUSG00000015889) Elk3 (ENSMUSG00000008398) #7 Cdk17 (ENSMUSG00000020015) #8 Cfap54 (ENSMUSG00000020014) Nedd1 (ENSMUSG00000019988) #11 Tmpo (ENSMUSG00000019961) #12 Slc25a3 (ENSMUSG00000061904) #13 Ikbip (ENSMUSG00000019975) #14 Apaf1 (ENSMUSG00000019979) #15 Anks1b (ENSMUSG00000058589) #17 Uhrf1bp1l (ENSMUSG00000019951) #21 Actr6 (ENSMUSG00000019948) #22 Scyl2 (ENSMUSG00000069539) #23 Slc17a8 (ENSMUSG00000019935) #24 Nr1h4 (ENSMUSG00000047638) #25 Gas2l3 (ENSMUSG00000074802) #26 Ano4 (ENSMUSG00000035189) #27 Slc5a8 (ENSMUSG00000020062) #28 Utp20 (ENSMUSG00000004356) #30 Arl1 (ENSMUSG00000060904) #31 Spic (ENSMUSG00000004359) #32 Mybpc1 (ENSMUSG00000020061) #33 Sycp3 (ENSMUSG00000020059) #35 Chpt1 (ENSMUSG00000060002) #34 Gnptab (ENSMUSG00000035311) #36 Dram1 (ENSMUSG00000020057) #37 Washc3 (ENSMUSG00000020056) Ryukyu mouse MODERN SPECIES 1 Snrpf (MGP_CAROLIEiJ_G0015735) Ccdc38 (MGP_CAROLIEiJ_G0015734) Amdhd1 (MGP_CAROLIEiJ_G0015733) Hal (MGP_CAROLIEiJ_G0015732) Lta4h (MGP_CAROLIEiJ_G0015731) Elk3 (MGP_CAROLIEiJ_G0015730) #7 Cdk17 (MGP_CAROLIEiJ_G0015729) #8 Cfap54 (MGP_CAROLIEiJ_G0015728) Nedd1 (MGP_CAROLIEiJ_G0015727) #11 MGP_CAROLIEiJ_G0015726 ##12 Slc25a3 (MGP_CAROLIEiJ_G0015725) #13 Ikbip (MGP_CAROLIEiJ_G0015724) #14 Apaf1 (MGP_CAROLIEiJ_G0015723) #15 Anks1b (MGP_CAROLIEiJ_G0015722) #17 Uhrf1bp1l (MGP_CAROLIEiJ_G0015721) #21 Actr6 (MGP_CAROLIEiJ_G0015720) #22 Scyl2 (MGP_CAROLIEiJ_G0015719) #23 Slc17a8 (MGP_CAROLIEiJ_G0015718) #24 Nr1h4 (MGP_CAROLIEiJ_G0015717) #25 Gas2l3 (MGP_CAROLIEiJ_G0015716) #26 Ano4 (MGP_CAROLIEiJ_G0015715) #27 Slc5a8 (MGP_CAROLIEiJ_G0015714) #28 Utp20 (MGP_CAROLIEiJ_G0015713) #30 Arl1 (MGP_CAROLIEiJ_G0015712) #31 MGP_CAROLIEiJ_G0015711 #32 Mybpc1 (MGP_CAROLIEiJ_G0015710) #33 Sycp3 (MGP_CAROLIEiJ_G0015709) #35 Chpt1 (MGP_CAROLIEiJ_G0015708) #34 Gnptab (MGP_CAROLIEiJ_G0015707) #36 Dram1 (MGP_CAROLIEiJ_G0015706) #37 Washc3 (MGP_CAROLIEiJ_G0015705) Shrew mouse MODERN SPECIES 22 Snrpf (MGP_PahariEiJ_G0031350) Ccdc38 (MGP_PahariEiJ_G0031351) MGP_PahariEiJ_G0031352 Hal (MGP_PahariEiJ_G0031353) Lta4h (MGP_PahariEiJ_G0031354) Elk3 (MGP_PahariEiJ_G0031355) #7 Cdk17 (MGP_PahariEiJ_G0031356) #8 Cfap54 (MGP_PahariEiJ_G0031357) Nedd1 (MGP_PahariEiJ_G0031358) #11 Tmpo (MGP_PahariEiJ_G0031359) #12 Slc25a3 (MGP_PahariEiJ_G0031360) #13 Ikbip (MGP_PahariEiJ_G0031361) #14 Apaf1 (MGP_PahariEiJ_G0031362) #15 Anks1b (MGP_PahariEiJ_G0031363) #17 Uhrf1bp1l (MGP_PahariEiJ_G0031364) #21 Actr6 (MGP_PahariEiJ_G0031365) #22 Scyl2 (MGP_PahariEiJ_G0031366) #23 Slc17a8 (MGP_PahariEiJ_G0031367) #24 Nr1h4 (MGP_PahariEiJ_G0031368) #25 Gas2l3 (MGP_PahariEiJ_G0031369) #26 Ano4 (MGP_PahariEiJ_G0031370) #27 Slc5a8 (MGP_PahariEiJ_G0031371) #28 Utp20 (MGP_PahariEiJ_G0031372) #30 Arl1 (MGP_PahariEiJ_G0031373) #31 Spic (MGP_PahariEiJ_G0031374) #32 Mybpc1 (MGP_PahariEiJ_G0031375) #33 MGP_PahariEiJ_G0031376 #34 Sycp3 (MGP_PahariEiJ_G0031377) #35 Gnptab (MGP_PahariEiJ_G0031378) #36 Dram1 (MGP_PahariEiJ_G0031379) #37 Washc3 (MGP_PahariEiJ_G0031380) Rat MODERN SPECIES 17 Amdhd1 (ENSRNOG00000005266) Hal (ENSRNOG00000004502) Lta4h (ENSRNOG00000004494) Elk3 (ENSRNOG00000004367) #7 Cdk17 (ENSRNOG00000004148) #8 Cfap54 (ENSRNOG00000024494) Nedd1 (ENSRNOG00000004011) #11 AABR07056611.1 (ENSRNOG00000055726) ENSRNOG00000064198 Tmpo (ENSRNOG00000008797) #13 Ikbip (ENSRNOG00000008247) #14 Apaf1 (ENSRNOG00000008022) #15 Anks1b (ENSRNOG00000024870) #17 Bltp3b (ENSRNOG00000050317) #21 ENSRNOG00000065049 Actr6 (ENSRNOG00000007875) #22 Scyl2 (ENSRNOG00000024955) #23 Slc17a8 (ENSRNOG00000007581) #24 ENSRNOG00000068987 Nr1h4 (ENSRNOG00000007197) #25 Gas2l3 (ENSRNOG00000063755) #26 LOC103692829 (ENSRNOG00000061320) AABR07056556.1 (ENSRNOG00000032424) Ano4 (ENSRNOG00000006841) #27 Slc5a8 (ENSRNOG00000006367) #28 Utp20 (ENSRNOG00000005823) #30 Arl1 (ENSRNOG00000005763) #31 Rps12l4 (ENSRNOG00000043412) Spic (ENSRNOG00000005720) #32 Mybpc1 (ENSRNOG00000056493) #33 Sycp3 (ENSRNOG00000005270) #35 Cricetidae ANCESTRAL SPECIES 21 ENSGT00390000008645 ENSGT00390000009047.b ENSGT00940000156375 ENSGT00940000157129 #7 ENSGT00940000155834 #8 ENSGT00940000162970 #9 ENSGT00940000164546 ENSGT00940000162446 ENSGT00390000001561 #11 ENSGT00940000154098.a.d #12 ENSGT00390000008708 #13 ENSGT00500000045001 #14 ENSGT00940000157710 #15 ENSGT00940000154572.`c #17 ENSGT00600000084428.b #21 ENSGT00720000108833 #22 ENSGT00880000138031 #23 ENSGT00940000158187 #24 ENSGT00940000158037 #25 ENSGT00940000159389 #26 ENSGT00940000158600 #27 ENSGT00940000155166.A #28 ENSGT00390000016813 #30 ENSGT00940000155118 #31 ENSGT00390000018318.u.b.a.b.a.a.b ENSGT00940000155067.a #32 ENSGT00940000158254 #33 ENSGT00950000183117.a.a #34 ENSGT00390000000062.x.a.b #35 ENSGT00390000006747 #36 ENSGT01030000234578.B.a #37 Cricetidae_B ANCESTRAL SPECIES 29 ENSGT00940000154818.a.a ENSGT00940000153110.B ENSGT00390000008645 ENSGT00390000009047.b ENSGT00940000156375 ENSGT00940000157129 #7 ENSGT00940000155834 #8 ENSGT00940000162446 ENSGT00390000001561 #11 ENSGT00940000154098.a.d #12 ENSGT00390000008708 #13 ENSGT00500000045001 #14 ENSGT00940000157710 #15 ENSGT00940000154572.`c #17 ENSGT00600000084428.b #21 ENSGT00720000108833 #22 ENSGT00880000138031 #23 ENSGT00940000158187 #24 ENSGT00940000158037 #25 ENSGT00940000159389 #26 ENSGT00940000158600 #27 ENSGT00940000155166.A #28 ENSGT00390000016813 #30 ENSGT00940000155118 #31 ENSGT00390000018318.u.b.a.b.a.a.b ENSGT00940000155067.a #32 ENSGT00940000158254 #33 ENSGT00950000183117.a.a #34 ENSGT00390000000062.x.a.b #35 ENSGT00390000006747 #36 ENSGT01030000234578.B.a #37 Prairie vole MODERN SPECIES 10 Snrpf (ENSMOCG00000020437) Ccdc38 (ENSMOCG00000000418) Amdhd1 (ENSMOCG00000013736) Hal (ENSMOCG00000020920) Lta4h (ENSMOCG00000007811) Elk3 (ENSMOCG00000012020) #7 Cdk17 (ENSMOCG00000014292) #8 Cfap54 (ENSMOCG00000015195) Nedd1 (ENSMOCG00000016729) #11 Tmpo (ENSMOCG00000003846) #12 Slc25a3 (ENSMOCG00000011110) #13 Ikbip (ENSMOCG00000003674) #14 Apaf1 (ENSMOCG00000015964) #15 Anks1b (ENSMOCG00000008363) #17 Uhrf1bp1l (ENSMOCG00000003118) #21 Actr6 (ENSMOCG00000020691) #22 ENSMOCG00000016884 #23 Slc17a8 (ENSMOCG00000009428) #24 Nr1h4 (ENSMOCG00000006519) #25 Gas2l3 (ENSMOCG00000010014) #26 Ano4 (ENSMOCG00000015645) #27 Slc5a8 (ENSMOCG00000012457) #28 Utp20 (ENSMOCG00000015242) #30 Arl1 (ENSMOCG00000005852) #31 ENSMOCG00000009467 Spic (ENSMOCG00000015321) #32 Mybpc1 (ENSMOCG00000022013) #33 Chpt1 (ENSMOCG00000014213) #34 Sycp3 (ENSMOCG00000018486) #35 ENSMOCG00000016954 #36 Dram1 (ENSMOCG00000021435) #37 Northern American deer mouse MODERN SPECIES 9 Snrpf (ENSPEMG00000023326) Ccdc38 (ENSPEMG00000021888) Amdhd1 (ENSPEMG00000022642) Hal (ENSPEMG00000022890) Lta4h (ENSPEMG00000024211) Elk3 (ENSPEMG00000015910) #7 Cdk17 (ENSPEMG00000013082) #8 Cfap54 (ENSPEMG00000022516) Nedd1 (ENSPEMG00000022166) #11 Tmpo (ENSPEMG00000013139) #12 Slc25a3 (ENSPEMG00000007546) #13 Ikbip (ENSPEMG00000003189) #14 Apaf1 (ENSPEMG00000013242) #15 Anks1b (ENSPEMG00000021142) #17 Uhrf1bp1l (ENSPEMG00000021207) #21 Actr6 (ENSPEMG00000007827) #22 Scyl2 (ENSPEMG00000015522) #23 ENSPEMG00000025459 Slc17a8 (ENSPEMG00000013525) #24 Nr1h4 (ENSPEMG00000021973) #25 Gas2l3 (ENSPEMG00000023391) #26 Ano4 (ENSPEMG00000009170) #27 Slc5a8 (ENSPEMG00000020559) #28 Utp20 (ENSPEMG00000024120) #30 Arl1 (ENSPEMG00000008781) #31 Spic (ENSPEMG00000020720) #32 Mybpc1 (ENSPEMG00000021020) #33 ENSPEMG00000012990 #34 Sycp3 (ENSPEMG00000021453) #35 Gnptab (ENSPEMG00000020834) #36 Dram1 (ENSPEMG00000021639) #37 Cricetinae ANCESTRAL SPECIES 22 ENSGT00940000153110.B ENSGT00390000008645 ENSGT00390000009047.b ENSGT00940000156375 ENSGT00940000157129 #7 ENSGT00940000155834 #8 ENSGT00940000162970 #9 ENSGT00940000164546 ENSGT00390000001561 #11 ENSGT00940000154098.a.d #12 ENSGT00390000008708 #13 ENSGT00500000045001 #14 ENSGT00940000157710 #15 ENSGT00940000154572.`c #17 ENSGT00600000084428.b #21 ENSGT00720000108833 #22 ENSGT00880000138031 #23 ENSGT00940000158187 #24 ENSGT00940000158037 #25 ENSGT00940000159389 #26 ENSGT00940000158600 #27 ENSGT00940000155166.A #28 ENSGT00390000016813 #30 ENSGT00940000155118 #31 ENSGT00390000018318.u.b.a.b.a.a.b ENSGT00940000155067.a #32 ENSGT00940000158254 #33 ENSGT00950000183117.a.a #34 ENSGT00390000000062.x.a.b #35 ENSGT00390000006747 #36 ENSGT01030000234578.B.a #37 Golden Hamster DUPLICATION Golden Hamster MODERN SPECIES 628 Hal (ENSMAUG00000018900) Lta4h (ENSMAUG00000001152) ENSMAUG00000008765 Elk3 (ENSMAUG00000009662) #7 Cdk17 (ENSMAUG00000017263) #8 ENSMAUG00000018845 #9 ENSMAUG00000021431 Nedd1 (ENSMAUG00000013081) #11 ENSMAUG00000015762 Tmpo (ENSMAUG00000014527) #12 Slc25a3 (ENSMAUG00000017601) #13 ENSMAUG00000022277 #14 ENSMAUG00000007841 #15 Anks1b (ENSMAUG00000010615) #17 Uhrf1bp1l (ENSMAUG00000013302) #21 ENSMAUG00000014661 #22 ENSMAUG00000010233 #22 Scyl2 (ENSMAUG00000013849) #23 Slc17a8 (ENSMAUG00000007901) #24 Nr1h4 (ENSMAUG00000011325) #25 Gas2l3 (ENSMAUG00000015984) #26 Ano4 (ENSMAUG00000021383) #27 Slc5a8 (ENSMAUG00000020619) #28 Utp20 (ENSMAUG00000011898) #30 Arl1 (ENSMAUG00000021923) #31 ENSMAUG00000008388 Mybpc1 (ENSMAUG00000008414) #33 Chpt1 (ENSMAUG00000012720) #34 Sycp3 (ENSMAUG00000012167) #35 Gnptab (ENSMAUG00000017361) #36 Dram1 (ENSMAUG00000022048) #37 Golden Hamster MODERN SPECIES 628 Lta4h (ENSMAUG00000001152) ENSMAUG00000008765 Elk3 (ENSMAUG00000009662) #7 Cdk17 (ENSMAUG00000017263) #8 ENSMAUG00000018845 #9 ENSMAUG00000021431 Nedd1 (ENSMAUG00000013081) #11 ENSMAUG00000015762 Tmpo (ENSMAUG00000014527) #12 Slc25a3 (ENSMAUG00000017601) #13 ENSMAUG00000022277 #14 ENSMAUG00000007841 #15 Anks1b (ENSMAUG00000010615) #17 Uhrf1bp1l (ENSMAUG00000013302) #21 ENSMAUG00000014661 #22 ENSMAUG00000010233 #22 Scyl2 (ENSMAUG00000013849) #23 Slc17a8 (ENSMAUG00000007901) #24 Nr1h4 (ENSMAUG00000011325) #25 Gas2l3 (ENSMAUG00000015984) #26 Ano4 (ENSMAUG00000021383) #27 Slc5a8 (ENSMAUG00000020619) #28 Utp20 (ENSMAUG00000011898) #30 Arl1 (ENSMAUG00000021923) #31 ENSMAUG00000008388 Mybpc1 (ENSMAUG00000008414) #33 Chpt1 (ENSMAUG00000012720) #34 Sycp3 (ENSMAUG00000012167) #35 Gnptab (ENSMAUG00000017361) #36 Dram1 (ENSMAUG00000022048) #37 Washc3 (ENSMAUG00000011959) Chinese hamster chok1gshd MODERN SPECIES 83 Hal (ENSCGRG00001000150) Lta4h (ENSCGRG00001010777) Elk3 (ENSCGRG00001021882) #7 Cdk17 (ENSCGRG00001016887) #8 ENSCGRG00001019085 #9 ENSCGRG00001014718 Nedd1 (ENSCGRG00001019132) #11 Tmpo (ENSCGRG00001018759) #12 Slc25a3 (ENSCGRG00001015631) #13 Ikbip (ENSCGRG00001015426) #14 Apaf1 (ENSCGRG00001019923) #15 ENSCGRG00001010325 #17 ENSCGRG00001012704 #17 ENSCGRG00001007098 Uhrf1bp1l (ENSCGRG00001015837) #21 Actr6 (ENSCGRG00001019259) #22 ENSCGRG00001005091 #23 Slc17a8 (ENSCGRG00001021681) #24 Nr1h4 (ENSCGRG00001017990) #25 Gas2l3 (ENSCGRG00001015751) #26 Ano4 (ENSCGRG00001022718) #27 Slc5a8 (ENSCGRG00001014482) #28 Utp20 (ENSCGRG00001017151) #30 Arl1 (ENSCGRG00001010446) #31 ENSCGRG00001008037 Spic (ENSCGRG00001005919) #32 Mybpc1 (ENSCGRG00001023486) #33 Chpt1 (ENSCGRG00001011169) #34 Sycp3 (ENSCGRG00001006406) #35 Gnptab (ENSCGRG00001022192) #36 Dram1 (ENSCGRG00001017541) #37 Lagomorpha ANCESTRAL SPECIES 22 ENSGT00390000008645 ENSGT00390000009047.b ENSGT00940000156375 ENSGT00940000157129 #7 ENSGT00940000155834 #8 ENSGT00940000162970 #9 ENSGT00940000162446 ENSGT00390000001561 #11 ENSGT00940000154098.a.d #12 ENSGT00390000008708 #13 ENSGT00500000045001 #14 ENSGT00940000157710 #15 ENSGT00940000154572.`c #17 ENSGT00940000162770 ENSGT00600000084428.b #21 ENSGT00720000108833 #22 ENSGT00950000182976.a.a ENSGT00880000138031 #23 ENSGT00940000158187 #24 ENSGT00940000158037 #25 ENSGT00940000159389 #26 ENSGT00940000158600 #27 ENSGT00940000155166.A #28 ENSGT00390000016813 #30 ENSGT00940000158254 #33 ENSGT00950000183117.a.a #34 ENSGT00390000000062.x.a #35 ENSGT00390000006747 #36 ENSGT01030000234578.B.a #37 ENSGT00390000014084 ENSGT00390000010777 Rabbit MODERN SPECIES 15 AMDHD1 (ENSOCUG00000005523) HAL (ENSOCUG00000005528) LTA4H (ENSOCUG00000005535) ELK3 (ENSOCUG00000034370) #7 CDK17 (ENSOCUG00000013583) #8 CFAP54 (ENSOCUG00000013917) NEDD1 (ENSOCUG00000010944) #11 ENSOCUG00000012692 #12 SLC25A3 (ENSOCUG00000011847) #13 IKBIP (ENSOCUG00000011854) #14 APAF1 (ENSOCUG00000011860) #15 ANKS1B (ENSOCUG00000029510) #17 ENSOCUG00000011887 ENSOCUG00000032944 #21 ENSOCUG00000017132 #21 ACTR6 (ENSOCUG00000000141) #22 ENSOCUG00000024669 SCYL2 (ENSOCUG00000009146) #23 SLC17A8 (ENSOCUG00000015995) #24 NR1H4 (ENSOCUG00000007177) #25 GAS2L3 (ENSOCUG00000007182) #26 ENSOCUG00000033171 ANO4 (ENSOCUG00000000881) #27 ENSOCUG00000036878 SLC5A8 (ENSOCUG00000003486) #28 ENSOCUG00000037051 UTP20 (ENSOCUG00000010475) #30 ARL1 (ENSOCUG00000002217) #31 ENSOCUG00000029302 ENSOCUG00000030138 ENSOCUG00000008070 #32 Pika MODERN SPECIES 5710 ACTR6 (ENSOPRG00000007378) #22 Tree shrew MODERN SPECIES 399 ENSTBEG00000013497 #22 Primates ANCESTRAL SPECIES 6 ENSGT00390000008645 ENSGT00390000009047.b ENSGT00940000156375 ENSGT00940000157129 #7 ENSGT00940000155834 #8 ENSGT00940000162970 #9 ENSGT00940000162446 ENSGT00390000001561 #11 ENSGT00940000154098.a.d #12 ENSGT00390000008708 #13 ENSGT00500000045001 #14 ENSGT00940000157710 #15 ENSGT00940000154572.`c #17 ENSGT00940000163320 #18 ENSGT00600000084428.b #21 ENSGT00720000108833 #22 ENSGT00950000182976.a.a ENSGT00880000138031 #23 ENSGT00940000158187 #24 ENSGT00940000158037 #25 ENSGT00940000159389 #26 ENSGT00940000158600 #27 ENSGT00940000155166.A #28 ENSGT00390000016813 #30 ENSGT00940000155118 #31 ENSGT00940000155067.a #32 ENSGT00940000158254 #33 ENSGT00950000183117.a.a #34 ENSGT00390000000062.x.a #35 ENSGT00390000006747 #36 ENSGT01030000234578.B.a #37 Haplorrhini ANCESTRAL SPECIES 3 ENSGT00390000008645 ENSGT00390000009047.b ENSGT00940000156375 ENSGT00940000157129 #7 ENSGT00940000155834 #8 ENSGT00940000162970 #9 ENSGT00940000162446 ENSGT00390000001561 #11 ENSGT00940000154098.a.d #12 ENSGT00390000008708 #13 ENSGT00500000045001 #14 ENSGT00940000157710 #15 ENSGT00940000154572.`c #17 ENSGT00940000163320 #18 ENSGT00600000084428.b #21 ENSGT00720000108833 #22 ENSGT00950000182976.a.a ENSGT00880000138031 #23 ENSGT00940000158187 #24 ENSGT00940000158037 #25 ENSGT00940000159389 #26 ENSGT00940000158600 #27 ENSGT00940000155166.A #28 ENSGT00390000016813 #30 ENSGT00940000155118 #31 ENSGT00940000155067.a #32 ENSGT00940000158254 #33 ENSGT00950000183117.a.a #34 ENSGT00390000000062.x.a #35 ENSGT00390000006747 #36 ENSGT01030000234578.B.a #37 Simiiformes ANCESTRAL SPECIES 4 ENSGT00940000156375 ENSGT00940000157129 #7 ENSGT00940000155834 #8 ENSGT00940000162970 #9 ENSGT00940000162446 ENSGT00390000001561 #11 ENSGT00940000154098.a.d #12 ENSGT00390000008708 #13 ENSGT00500000045001 #14 ENSGT00940000157710 #15 ENSGT00940000154572.`c #17 ENSGT00910000147278 ENSGT00940000163320 #18 ENSGT00600000084428.b #21 ENSGT00530000062932.c.a.a.a.b.b.a.b.a.b ENSGT00720000108833 #22 ENSGT00950000182976.a.a ENSGT00880000138031.j #23 ENSGT00940000158187 #24 ENSGT00940000158037 #25 ENSGT00940000159389 #26 ENSGT00940000158600 #27 ENSGT00940000155166.A #28 ENSGT00390000016813 #30 ENSGT00940000155118 #31 ENSGT00940000155067.a #32 ENSGT00940000158254 #33 ENSGT00950000183117.a.a #34 ENSGT00390000000062.x.a #35 ENSGT00390000006747 #36 ENSGT01030000234578.B.a #37 Catarrhini ANCESTRAL SPECIES 4 ENSGT00940000157129 #7 ENSGT00940000155834 #8 ENSGT00940000162970 #9 ENSGT00940000162446 ENSGT00390000001561 #11 ENSGT00940000153460.c.a.b ENSGT00940000154098.a.d #12 ENSGT00390000008708 #13 ENSGT00500000045001 #14 ENSGT00940000157710 #15 ENSGT00940000154572.`c #17 ENSGT00910000147278 ENSGT00940000163320 #18 ENSGT00600000084428.b #21 ENSGT00530000062932.c.a.a.a.b.b.a.b.a.b ENSGT00720000108833 #22 ENSGT00950000182976.a.a ENSGT00880000138031.j #23 ENSGT00940000158187 #24 ENSGT00940000158037 #25 ENSGT00390000014405.e.b ENSGT00940000159389 #26 ENSGT00940000154632.q.a.a.a ENSGT00940000158600 #27 ENSGT00940000155166.A #28 ENSGT00390000016813 #30 ENSGT00940000155118 #31 ENSGT00940000155067.a.a.a #32 ENSGT00940000158254 #33 ENSGT00950000183117.a.a #34 ENSGT00390000000062.x.a #35 Hominoidea ANCESTRAL SPECIES 5 ENSGT00940000156375 ENSGT00940000157129 #7 ENSGT00940000155834 #8 ENSGT00940000162446 ENSGT00390000001561 #11 ENSGT00940000153460.c.a.b ENSGT00940000154098.a.d #12 ENSGT00390000008708 #13 ENSGT00500000045001 #14 ENSGT00940000157710 #15 ENSGT00940000154572.`c #17 ENSGT00910000147278 ENSGT00940000163320 #18 ENSGT00600000084428.b #21 ENSGT00530000062932.c.a.a.a.b.b.a.b.a.b ENSGT00720000108833 #22 ENSGT00950000182976.a.a ENSGT00940000158187 #24 ENSGT00940000158037 #25 ENSGT00390000014405.e.b ENSGT00940000159389 #26 ENSGT00940000154632.q.a.a.a ENSGT00940000158600 #27 ENSGT00940000155166.A #28 ENSGT00390000016813 #30 ENSGT00940000155118 #31 ENSGT00940000155067.a.a.b #32 ENSGT00940000158254 #33 ENSGT00950000183117.a.a #34 ENSGT00390000000062.x.a #35 ENSGT00390000006747 #36 Hominidae ANCESTRAL SPECIES 4 ENSGT00390000009047.b ENSGT00940000156375 ENSGT00940000157129 #7 ENSGT00940000155834 #8 ENSGT00940000162446 ENSGT00390000001561 #11 ENSGT00940000153460.c.a.b ENSGT00940000154098.a.d #12 ENSGT00390000008708 #13 ENSGT00500000045001 #14 ENSGT00940000157710 #15 ENSGT00940000154572.`c #17 ENSGT00940000163320 #18 ENSGT00600000084428.b #21 ENSGT00530000062932.c.a.a.a.b.b.a.b.a.b ENSGT00720000108833 #22 ENSGT00950000182976.a.a ENSGT00880000138031.j #23 ENSGT00940000158187 #24 ENSGT00940000158037 #25 ENSGT00390000014405.e.b ENSGT00940000159389 #26 ENSGT00940000158600 #27 ENSGT00940000155166.A #28 ENSGT00390000016813 #30 ENSGT00940000155118 #31 ENSGT00940000155067.a.a.b #32 ENSGT00940000158254 #33 ENSGT00950000183117.a.a #34 ENSGT00390000000062.x.a #35 ENSGT00390000006747 #36 Homo/Pan/Gorilla group ANCESTRAL SPECIES 5 ENSGT00940000162446 ENSGT00390000001561 #11 ENSGT00940000153460.c.a.b ENSGT00940000154098.a.d #12 ENSGT00390000008708 #13 ENSGT00500000045001 #14 ENSGT00940000157710 #15 ENSGT00940000154572.`c #17 ENSGT00950000183105.B.a.a.a.b ENSGT00910000147278 ENSGT00910000147996 ENSGT00940000163320 #18 ENSGT00390000005569.x.a.a.a.b ENSGT00600000084428.b #21 ENSGT00530000062932.c.a.a.a.b.b.a.b.a.b ENSGT00720000108833 #22 ENSGT00950000182976.a.a ENSGT00880000138031.j #23 ENSGT00940000158187 #24 ENSGT00940000158037 #25 ENSGT00390000014405.e.b ENSGT00940000159389 #26 ENSGT00940000158600 #27 ENSGT00940000155166.A #28 ENSGT00390000016813 #30 ENSGT00940000155118 #31 ENSGT00940000155067.a.a.b #32 ENSGT00940000158254 #33 ENSGT00950000183117.a.a #34 ENSGT00390000000062.x.a #35 ENSGT00390000006747 #36 Gorilla MODERN SPECIES 3 CFAP54 (ENSGGOG00000008490) NEDD1 (ENSGGOG00000010743) #11 ENSGGOG00000039481 ENSGGOG00000003388 #12 SLC25A3 (ENSGGOG00000015886) #13 IKBIP (ENSGGOG00000008397) #14 APAF1 (ENSGGOG00000008401) #15 ANKS1B (ENSGGOG00000008413) #17 ENSGGOG00000039927 ENSGGOG00000040544 ENSGGOG00000042686 GARIN6 (ENSGGOG00000028296) #18 ENSGGOG00000040695 BLTP3B (ENSGGOG00000022523) #21 ENSGGOG00000023818 ACTR6 (ENSGGOG00000000854) #22 ENSGGOG00000010270 SCYL2 (ENSGGOG00000002948) #23 SLC17A8 (ENSGGOG00000016824) #24 NR1H4 (ENSGGOG00000008137) #25 GAS2L3 (ENSGGOG00000003196) #26 ENSGGOG00000038498 ANO4 (ENSGGOG00000000193) #27 SLC5A8 (ENSGGOG00000004017) #28 UTP20 (ENSGGOG00000004904) #30 ARL1 (ENSGGOG00000010788) #31 SPIC (ENSGGOG00000024597) #32 MYBPC1 (ENSGGOG00000010147) #33 CHPT1 (ENSGGOG00000007397) #34 SYCP3 (ENSGGOG00000002946) #35 GNPTAB (ENSGGOG00000009796) #36 Homo/Pan group ANCESTRAL SPECIES 6 ENSGT00940000162446 ENSGT00390000001561 #11 ENSGT00940000153460.c.a.b ENSGT00940000154098.a.d #12 ENSGT00390000008708 #13 ENSGT00500000045001 #14 ENSGT00940000157710 #15 ENSGT00940000154572.`c #17 ENSGT00950000183105.B.a.a.a.b ENSGT00910000147278 ENSGT00910000147996 ENSGT00940000163320 #18 ENSGT00390000005569.x.a.a.a.b ENSGT00600000084428.b #21 ENSGT00530000062932.c.a.a.a.b.b.a.b.a.b ENSGT00720000108833 #22 ENSGT00950000182976.a.a ENSGT00880000138031.j #23 ENSGT00940000158187 #24 ENSGT00940000158037 #25 ENSGT00390000014405.e.b ENSGT00940000159389 #26 ENSGT00940000158600 #27 ENSGT00940000155166.A #28 ENSGT00390000016813 #30 ENSGT00940000155118 #31 ENSGT00940000155067.a.a.b #32 ENSGT00940000158254 #33 ENSGT00950000183117.a.a #34 ENSGT00390000000062.x.a #35 ENSGT00390000006747 #36 Pan ANCESTRAL SPECIES 4 ENSGT00940000162446 ENSGT00390000001561 #11 ENSGT00940000153460.c.a.b ENSGT00940000154098.a.d #12 ENSGT00390000008708 #13 ENSGT00500000045001 #14 ENSGT00940000157710 #15 ENSGT00940000154572.`c #17 ENSGT00950000183105.B.a.a.a.b ENSGT00910000147278 ENSGT00910000147996 ENSGT00940000163320 #18 ENSGT00390000005569.x.a.a.a.b ENSGT00600000084428.b #21 ENSGT00530000062932.c.a.a.a.b.b.a.b.a.b ENSGT00720000108833 #22 ENSGT00950000182976.a.a ENSGT00880000138031.j #23 ENSGT00940000158187 #24 ENSGT00940000158037 #25 ENSGT00390000014405.e.b ENSGT00940000159389 #26 ENSGT00940000158600 #27 ENSGT00940000155166.A #28 ENSGT00390000016813 #30 ENSGT00940000155118 #31 ENSGT00940000155067.a.a.b #32 ENSGT00940000158254 #33 ENSGT00950000183117.a.a #34 ENSGT00390000000062.x.a #35 ENSGT00390000006747 #36 Chimpanzee MODERN SPECIES 3 CFAP54 (ENSPTRG00000005326) #9 NEDD1 (ENSPTRG00000005329) #11 ENSPTRG00000039568 TMPO (ENSPTRG00000005331) #12 SLC25A3 (ENSPTRG00000005333) #13 ENSPTRG00000005334 #14 APAF1 (ENSPTRG00000005335) #15 ANKS1B (ENSPTRG00000005336) #17 ENSPTRG00000044995 ENSPTRG00000046979 ENSPTRG00000043655 GARIN6 (ENSPTRG00000005338) #18 ENSPTRG00000047093 BLTP3B (ENSPTRG00000005339) #21 ENSPTRG00000047818 ACTR6 (ENSPTRG00000005341) #22 DEPDC4 (ENSPTRG00000039541) SCYL2 (ENSPTRG00000051978) #23 SLC17A8 (ENSPTRG00000005344) #24 NR1H4 (ENSPTRG00000005345) #25 ENSPTRG00000051429 GAS2L3 (ENSPTRG00000005346) #26 ANO4 (ENSPTRG00000005347) #27 SLC5A8 (ENSPTRG00000005348) #28 UTP20 (ENSPTRG00000005349) #30 ARL1 (ENSPTRG00000005350) #31 SPIC (ENSPTRG00000005351) #32 MYBPC1 (ENSPTRG00000005353) #33 CHPT1 (ENSPTRG00000005354) #34 SYCP3 (ENSPTRG00000005355) #35 GNPTAB (ENSPTRG00000005356) #36 Bonobo MODERN SPECIES 3 NEDD1 (ENSPPAG00000028158) #11 ENSPPAG00000040182 ENSPPAG00000031102 #12 SLC25A3 (ENSPPAG00000029167) #13 IKBIP (ENSPPAG00000003106) #14 APAF1 (ENSPPAG00000031677) #15 ANKS1B (ENSPPAG00000026584) #17 ENSPPAG00000040891 ENSPPAG00000040779 ENSPPAG00000043599 ENSPPAG00000020393 GARIN6 (ENSPPAG00000031008) #18 ENSPPAG00000042658 BLTP3B (ENSPPAG00000034670) #21 ENSPPAG00000035717 ACTR6 (ENSPPAG00000035162) #22 ENSPPAG00000033600 SCYL2 (ENSPPAG00000032245) #23 SLC17A8 (ENSPPAG00000041738) #24 NR1H4 (ENSPPAG00000027056) #25 GAS2L3 (ENSPPAG00000032303) #26 ENSPPAG00000042869 ANO4 (ENSPPAG00000037910) #27 SLC5A8 (ENSPPAG00000038189) #28 UTP20 (ENSPPAG00000001381) #30 ARL1 (ENSPPAG00000034860) #31 SPIC (ENSPPAG00000029437) #32 MYBPC1 (ENSPPAG00000027978) #33 ENSPPAG00000029593 #34 SYCP3 (ENSPPAG00000031232) #35 GNPTAB (ENSPPAG00000041156) #36 Human MODERN SPECIES 3 CCDC38 (ENSG00000165972) AMDHD1 (ENSG00000139344) HAL (ENSG00000084110) LTA4H (ENSG00000111144) ELK3 (ENSG00000111145) #7 CDK17 (ENSG00000059758) #8 CFAP54 (ENSG00000188596) NEDD1 (ENSG00000139350) #11 TMPO (ENSG00000120802) ##12 SLC25A3 (ENSG00000075415) #13 IKBIP (ENSG00000166130) #14 APAF1 (ENSG00000120868) #15 ANKS1B (ENSG00000185046) #17 GARIN6 (ENSG00000180219) #18 BLTP3B (ENSG00000111647) #21 ACTR6 (ENSG00000075089) #22 DEPDC4 (ENSG00000166153) SCYL2 (ENSG00000136021) #23 SLC17A8 (ENSG00000179520) #24 NR1H4 (ENSG00000012504) #25 GAS2L3 (ENSG00000139354) #26 ANO4 (ENSG00000151572) #27 SLC5A8 (ENSG00000256870) #28 UTP20 (ENSG00000120800) #30 ARL1 (ENSG00000120805) #31 SPIC (ENSG00000166211) #32 MYBPC1 (ENSG00000196091) #33 CHPT1 (ENSG00000111666) #34 SYCP3 (ENSG00000139351) #35 GNPTAB (ENSG00000111670) #36 DRAM1 (ENSG00000136048) #37 Orangutan MODERN SPECIES 3 AMDHD1 (ENSPPYG00000004849) HAL (ENSPPYG00000004850) LTA4H (ENSPPYG00000004851) ELK3 (ENSPPYG00000004852) #7 CDK17 (ENSPPYG00000004853) #8 CFAP54 (ENSPPYG00000004855) NEDD1 (ENSPPYG00000004856) #11 ENSPPYG00000004857 #12 SLC25A3 (ENSPPYG00000004858) #13 IKBIP (ENSPPYG00000040489) #14 APAF1 (ENSPPYG00000004860) #15 ANKS1B (ENSPPYG00000004861) #17 ENSPPYG00000004862 #18 BLTP3B (ENSPPYG00000004863) #21 ENSPPYG00000033741 ACTR6 (ENSPPYG00000004864) #22 ENSPPYG00000032292 SCYL2 (ENSPPYG00000004865) #23 SLC17A8 (ENSPPYG00000004866) #24 NR1H4 (ENSPPYG00000004867) #25 ENSPPYG00000040948 GAS2L3 (ENSPPYG00000004868) #26 ANO4 (ENSPPYG00000004869) #27 SLC5A8 (ENSPPYG00000004870) #28 UTP20 (ENSPPYG00000004871) #30 ENSPPYG00000004872 #31 SPIC (ENSPPYG00000004873) #32 MYBPC1 (ENSPPYG00000004874) #33 CHPT1 (ENSPPYG00000004875) #34 SYCP3 (ENSPPYG00000004876) #35 GNPTAB (ENSPPYG00000004877) #36 Gibbon MODERN SPECIES ELK3 (ENSNLEG00000005910) #7 CDK17 (ENSNLEG00000005912) #8 CFAP54 (ENSNLEG00000005915) NEDD1 (ENSNLEG00000005930) #11 ENSNLEG00000005966 ENSNLEG00000027479 #12 SLC25A3 (ENSNLEG00000005973) #13 IKBIP (ENSNLEG00000006012) #14 APAF1 (ENSNLEG00000006016) #15 ENSNLEG00000036133 ENSNLEG00000034600 #17 GARIN6 (ENSNLEG00000031711) #18 ENSNLEG00000006082 #17 BLTP3B (ENSNLEG00000006138) #21 ENSNLEG00000032735 ACTR6 (ENSNLEG00000028538) #22 ENSNLEG00000006164 ZNF677 (ENSNLEG00000006168) VN1R2 (ENSNLEG00000006170) ENSNLEG00000031769 ZNF845 (ENSNLEG00000006172) ENSNLEG00000034337 ZNF525 (ENSNLEG00000034697) ENSNLEG00000035271 ZNF761 (ENSNLEG00000027115) ENSNLEG00000027510 ZNF813 (ENSNLEG00000035096) ZNF331 (ENSNLEG00000028581) ENSNLEG00000031344 DPRX (ENSNLEG00000006178) NLRP12 (ENSNLEG00000006179) Cercopithecidae ANCESTRAL SPECIES 3 ENSGT00390000009047.b ENSGT00940000156375 ENSGT00940000157129 #7 ENSGT00940000155834 #8 ENSGT00940000162970 #9 ENSGT00940000162446 ENSGT00390000001561 #11 ENSGT00940000153460.c.a.b ENSGT00940000154098.a.d #12 ENSGT00390000008708 #13 ENSGT00500000045001 #14 ENSGT00940000157710 #15 ENSGT00940000154572.`c #17 ENSGT00940000163320 #18 ENSGT00600000084428.b #21 ENSGT00720000108833 #22 ENSGT00950000182976.a.a ENSGT00880000138031.j #23 ENSGT00940000158187 #24 ENSGT00940000158037 #25 ENSGT00390000014405.e.b ENSGT00940000159389 #26 ENSGT00940000154632.q.a.a.a ENSGT00940000158600 #27 ENSGT00940000155166.A #28 ENSGT00390000016813 #30 ENSGT00940000155118 #31 ENSGT00940000155067.a.a.a #32 ENSGT00940000158254 #33 ENSGT00950000183117.a.a #34 ENSGT00390000000062.x.a #35 Cercopithecinae ANCESTRAL SPECIES 7 ENSGT00390000009047.b ENSGT00940000156375 ENSGT00940000157129 #7 ENSGT00940000155834 #8 ENSGT00940000162970 #9 ENSGT00940000162446 ENSGT00390000001561 #11 ENSGT00940000153460.c.a.b ENSGT00940000154098.a.d #12 ENSGT00390000008708 #13 ENSGT00500000045001 #14 ENSGT00940000157710 #15 ENSGT00940000154572.`c #17 ENSGT00940000163320 #18 ENSGT00600000084428.b #21 ENSGT00720000108833 #22 ENSGT00950000182976.a.a ENSGT00880000138031.j #23 ENSGT00940000158187 #24 ENSGT00940000158037 #25 ENSGT00390000014405.e.b ENSGT00940000159389 #26 ENSGT00940000154632.q.a.a.a ENSGT00940000158600 #27 ENSGT00940000155166.A #28 ENSGT00390000016813 #30 ENSGT00940000155118 #31 ENSGT00940000155067.a.a.a #32 ENSGT00940000158254 #33 ENSGT00950000183117.a.a #34 ENSGT00390000000062.x.a.c #35 Cercopithecinae_a ANCESTRAL SPECIES 7 ENSGT00390000008645 ENSGT00390000009047.b ENSGT00940000156375 ENSGT00940000157129 #7 ENSGT00940000155834 #8 ENSGT00940000162446 ENSGT00390000001561 #11 ENSGT00940000153460.c.a.b ENSGT00940000154098.a.d #12 ENSGT00390000008708 #13 ENSGT00500000045001 #14 ENSGT00940000157710 #15 ENSGT00940000154572.`c #17 ENSGT00940000163320 #18 ENSGT00600000084428.b #21 ENSGT00720000108833 #22 ENSGT00950000182976.a.a ENSGT00880000138031.j #23 ENSGT00940000158187 #24 ENSGT00940000158037 #25 ENSGT00390000014405.e.b ENSGT00940000159389 #26 ENSGT00940000154632.q.a.a.a ENSGT00940000158600 #27 ENSGT00940000155166.A #28 ENSGT00390000016813 #30 ENSGT00910000147311 ENSGT00940000155118 #31 ENSGT00940000155067.a.a.a #32 ENSGT00940000158254 #33 ENSGT00950000183117.a.a #34 Macaca ANCESTRAL SPECIES 6 ENSGT00390000008645 ENSGT00390000009047.b ENSGT00940000156375 ENSGT00940000157129 #7 ENSGT00940000155834 #8 ENSGT00940000162446 ENSGT00390000001561 #11 ENSGT00940000153460.c.a.b ENSGT00940000154098.a.d #12 ENSGT00390000008708 #13 ENSGT00500000045001 #14 ENSGT00940000157710 #15 ENSGT00940000154572.`c #17 ENSGT00940000163320 #18 ENSGT00600000084428.b #21 ENSGT00720000108833 #22 ENSGT00950000182976.a.a ENSGT00880000138031.j #23 ENSGT00940000158187 #24 ENSGT00940000158037 #25 ENSGT00390000014405.e.b ENSGT00940000159389 #26 ENSGT00940000154632.q.a.a.a ENSGT00940000158600 #27 ENSGT00940000155166.A #28 ENSGT00390000016813 #30 ENSGT00910000147311 ENSGT00940000155118 #31 ENSGT00940000155067.a.a.a #32 ENSGT00940000158254 #33 ENSGT00950000183117.a.a #34 Pig-tailed macaque MODERN SPECIES 206 LINGO2 (ENSMNEG00000014874) C9orf72 (ENSMNEG00000032167) MOB3B (ENSMNEG00000032479) EQTN (ENSMNEG00000012016) TEK (ENSMNEG00000036308) LRRC19 (ENSMNEG00000030147) IFT74 (ENSMNEG00000031183) PLAA (ENSMNEG00000026616) CAAP1 (ENSMNEG00000038989) ENSMNEG00000000447 BLTP3B (ENSMNEG00000036255) #21 ACTR6 (ENSMNEG00000045418) #22 SCYL2 (ENSMNEG00000039352) #23 SLC17A8 (ENSMNEG00000034787) #24 NR1H4 (ENSMNEG00000029077) #25 ENSMNEG00000034160 GAS2L3 (ENSMNEG00000043688) #26 ENSMNEG00000038922 ANO4 (ENSMNEG00000035796) #27 SLC5A8 (ENSMNEG00000044791) #28 UTP20 (ENSMNEG00000037418) #30 ENSMNEG00000030959 ENSMNEG00000010988 ARL1 (ENSMNEG00000007067) #31 ENSMNEG00000041759 #32 MYBPC1 (ENSMNEG00000030777) #33 CHPT1 (ENSMNEG00000021213) #34 Macaca_a ANCESTRAL SPECIES 6 ENSGT00940000156375 ENSGT00940000157129 #7 ENSGT00940000155834 #8 ENSGT00940000162446 ENSGT00390000001561 #11 ENSGT00390000017580.`b ENSGT00940000154098.a.d #12 ENSGT00390000008708 #13 ENSGT00500000045001 #14 ENSGT00940000157710 #15 ENSGT00940000154572.`c #17 ENSGT00910000148587 ENSGT00940000163320 #18 ENSGT00600000084428.b #21 ENSGT00940000164709.a.b.b.a.b.b.a.a.b.a.a.a.a.b.a.b ENSGT00720000108833 #22 ENSGT00950000182976.a.a ENSGT00880000138031.j #23 ENSGT00940000158187 #24 ENSGT00940000158037 #25 ENSGT00940000159389 #26 ENSGT00950000183123.g.a.b.b.r.b.b.a ENSGT00940000158600 #27 ENSGT00940000155166.A #28 ENSGT00390000016813 #30 ENSGT00940000155118 #31 ENSGT00940000155067.a.a.a #32 ENSGT00940000158254 #33 ENSGT00950000183117.a.a #34 ENSGT00390000000062.x.a.c #35 ENSGT00390000006747 #36 Rhesus MODERN SPECIES 2 CFAP54 (ENSMMUG00000019643) NEDD1 (ENSMMUG00000004093) #11 ENSMMUG00000001354 ENSMMUG00000063079 TMPO (ENSMMUG00000023719) #12 SLC25A3 (ENSMMUG00000023036) #13 IKBIP (ENSMMUG00000051674) #14 APAF1 (ENSMMUG00000022404) #15 ANKS1B (ENSMMUG00000022406) #17 ENSMMUG00000062511 ENSMMUG00000054350 GARIN6 (ENSMMUG00000002178) #18 ENSMMUG00000058638 BLTP3B (ENSMMUG00000023601) #21 ENSMMUG00000063774 ACTR6 (ENSMMUG00000023603) #22 SCYL2 (ENSMMUG00000023600) #23 SLC17A8 (ENSMMUG00000017646) #24 NR1H4 (ENSMMUG00000003571) #25 GAS2L3 (ENSMMUG00000020360) #26 ANO4 (ENSMMUG00000018718) #27 ENSMMUG00000055254 SLC5A8 (ENSMMUG00000015134) #28 UTP20 (ENSMMUG00000012891) #30 ARL1 (ENSMMUG00000031610) #31 ENSMMUG00000061260 #32 MYBPC1 (ENSMMUG00000020875) #33 CHPT1 (ENSMMUG00000020877) #34 SYCP3 (ENSMMUG00000063989) #35 GNPTAB (ENSMMUG00000012562) #36 DRAM1 (ENSMMUG00000042077) #37 Crab-eating macaque MODERN SPECIES 2 NEDD1 (ENSMFAG00000002214) #11 ENSMFAG00000060983 ENSMFAG00000030299 ENSMFAG00000037885 #12 ENSMFAG00000055805 SLC25A3 (ENSMFAG00000000145) #13 ENSMFAG00000051788 #14 IKBIP (ENSMFAG00000045834) #14 APAF1 (ENSMFAG00000039197) #15 ANKS1B (ENSMFAG00000032660) #17 ENSMFAG00000062988 ENSMFAG00000049863 GARIN6 (ENSMFAG00000044311) #18 BLTP3B (ENSMFAG00000010028) #21 ENSMFAG00000051648 ACTR6 (ENSMFAG00000040575) #22 ENSMFAG00000053279 SCYL2 (ENSMFAG00000028879) #23 SLC17A8 (ENSMFAG00000002114) #24 NR1H4 (ENSMFAG00000002236) #25 GAS2L3 (ENSMFAG00000003398) #26 ANO4 (ENSMFAG00000036524) #27 ENSMFAG00000031324 SLC5A8 (ENSMFAG00000031305) #28 UTP20 (ENSMFAG00000037766) #30 ARL1 (ENSMFAG00000035725) #31 ENSMFAG00000003748 #32 MYBPC1 (ENSMFAG00000038552) #33 CHPT1 (ENSMFAG00000045187) #34 SYCP3 (ENSMFAG00000037508) #35 GNPTAB (ENSMFAG00000038457) #36 Cercopithecinae_b ANCESTRAL SPECIES 2 ENSGT00390000008645 ENSGT00390000009047.b ENSGT00940000156375 ENSGT00940000157129 #7 ENSGT00940000155834 #8 ENSGT00940000162446 ENSGT00390000001561 #11 ENSGT00940000153460.c.a.b ENSGT00940000154098.a.d #12 ENSGT00390000008708 #13 ENSGT00500000045001 #14 ENSGT00940000157710 #15 ENSGT00940000154572.`c #17 ENSGT00940000163320 #18 ENSGT00600000084428.b #21 ENSGT00720000108833 #22 ENSGT00880000138031.j #23 ENSGT00940000158187 #24 ENSGT00940000158037 #25 ENSGT00390000014405.e.b ENSGT00940000159389 #26 ENSGT00940000154632.q.a.a.a ENSGT00940000158600 #27 ENSGT00940000155166.A #28 ENSGT00390000016813 #30 ENSGT00910000147311 ENSGT00940000155118 #31 ENSGT00940000155067.a.a.a #32 ENSGT00940000158254 #33 ENSGT00950000183117.a.a #34 ENSGT00390000000062.x.a.c #35 Olive baboon MODERN SPECIES 19 ELK3 (ENSPANG00000017478) #7 CDK17 (ENSPANG00000023604) #8 ENSPANG00000050074 ENSPANG00000044719 CFAP54 (ENSPANG00000035731) NEDD1 (ENSPANG00000023046) #11 ENSPANG00000019454 #12 ENSPANG00000018018 #13 IKBIP (ENSPANG00000009791) #14 APAF1 (ENSPANG00000011409) #15 ANKS1B (ENSPANG00000008710) #17 ENSPANG00000047895 GARIN6 (ENSPANG00000041130) #18 ENSPANG00000049329 BLTP3B (ENSPANG00000005928) #21 ACTR6 (ENSPANG00000007907) #22 SCYL2 (ENSPANG00000015389) #23 SLC17A8 (ENSPANG00000004049) #24 NR1H4 (ENSPANG00000023009) #25 GAS2L3 (ENSPANG00000013394) #26 ANO4 (ENSPANG00000017946) #27 ENSPANG00000045224 SLC5A8 (ENSPANG00000006619) #28 ARL1 (ENSPANG00000018816) #31 UTP20 (ENSPANG00000020388) #30 ENSPANG00000018239 #32 ENSPANG00000045377 MYBPC1 (ENSPANG00000009790) #33 CHPT1 (ENSPANG00000004451) #34 SYCP3 (ENSPANG00000000419) #35 GNPTAB (ENSPANG00000000420) #36 Cercopithecinae_d ANCESTRAL SPECIES 5 ENSGT00390000008645 ENSGT00390000009047.b ENSGT00940000156375 ENSGT00940000157129 #7 ENSGT00940000155834 #8 ENSGT00940000162446 ENSGT00390000001561 #11 ENSGT00940000153460.c.a.b ENSGT00940000154098.a.d #12 ENSGT00390000008708 #13 ENSGT00500000045001 #14 ENSGT00940000157710 #15 ENSGT00940000154572.`c #17 ENSGT00940000163320 #18 ENSGT00600000084428.b #21 ENSGT00720000108833 #22 ENSGT00880000138031.j #23 ENSGT00940000158187 #24 ENSGT00940000158037 #25 ENSGT00390000014405.e.b ENSGT00940000159389 #26 ENSGT00940000154632.q.a.a.a ENSGT00940000158600 #27 ENSGT00940000155166.A #28 ENSGT00390000016813 #30 ENSGT00910000147311 ENSGT00940000155118 #31 ENSGT00940000155067.a.a.a #32 ENSGT00940000158254 #33 ENSGT00950000183117.a.a #34 ENSGT00390000000062.x.a.c #35 Sooty mangabey MODERN SPECIES 406 AMDHD1 (ENSCATG00000043814) HAL (ENSCATG00000016653) LTA4H (ENSCATG00000043659) ELK3 (ENSCATG00000035761) #7 CDK17 (ENSCATG00000008799) #8 CFAP54 (ENSCATG00000040097) NEDD1 (ENSCATG00000040561) #11 ENSCATG00000035402 ENSCATG00000037155 #12 SLC25A3 (ENSCATG00000042696) #13 IKBIP (ENSCATG00000039722) #14 APAF1 (ENSCATG00000042930) #15 GARIN6 (ENSCATG00000039282) #18 ANKS1B (ENSCATG00000034542) #17 BLTP3B (ENSCATG00000035719) #21 ACTR6 (ENSCATG00000035115) #22 SCYL2 (ENSCATG00000028764) #23 SLC17A8 (ENSCATG00000043531) #24 NR1H4 (ENSCATG00000042241) #25 ENSCATG00000035203 GAS2L3 (ENSCATG00000040264) #26 ANO4 (ENSCATG00000039666) #27 SLC5A8 (ENSCATG00000021653) #28 UTP20 (ENSCATG00000035636) #30 ENSCATG00000020659 ARL1 (ENSCATG00000040389) #31 ENSCATG00000039921 #32 MYBPC1 (ENSCATG00000036055) #33 CHPT1 (ENSCATG00000040898) #34 ENSCATG00000041189 #35 GNPTAB (ENSCATG00000041157) #36 Drill MODERN SPECIES 1084 ENSMLEG00000032476 ENSMLEG00000040746 #12 SLC25A3 (ENSMLEG00000030898) #13 IKBIP (ENSMLEG00000033117) #14 APAF1 (ENSMLEG00000036093) #15 GARIN6 (ENSMLEG00000041924) #18 ANKS1B (ENSMLEG00000035476) #17 BLTP3B (ENSMLEG00000029606) #21 ACTR6 (ENSMLEG00000044194) #22 SCYL2 (ENSMLEG00000029042) #23 SLC17A8 (ENSMLEG00000039757) #24 Vervet Monkey MODERN SPECIES 2 CDK17 (ENSCSAG00000003570) #8 ENSCSAG00000003566 #9 ENSCSAG00000003561 NEDD1 (ENSCSAG00000003548) #11 ENSCSAG00000003543 TMPO (ENSCSAG00000003541) ##12 SLC25A3 (ENSCSAG00000003535) #13 IKBIP (ENSCSAG00000003532) #14 APAF1 (ENSCSAG00000003526) #15 ENSCSAG00000003515 #17 ENSCSAG00000003498 ENSCSAG00000003493 ENSCSAG00000003488 #17 GARIN6 (ENSCSAG00000003485) #18 BLTP3B (ENSCSAG00000003481) #21 ACTR6 (ENSCSAG00000003476) #22 ENSCSAG00000003470 #23 ENSCSAG00000003466 #23 SLC17A8 (ENSCSAG00000003460) #24 NR1H4 (ENSCSAG00000003451) #25 GAS2L3 (ENSCSAG00000003446) #26 ANO4 (ENSCSAG00000003436) #27 SLC5A8 (ENSCSAG00000003405) #28 UTP20 (ENSCSAG00000003388) #30 ARL1 (ENSCSAG00000003368) #31 ENSCSAG00000003364 #32 MYBPC1 (ENSCSAG00000003356) #33 CHPT1 (ENSCSAG00000003350) #34 ENSCSAG00000003341 #35 GNPTAB (ENSCSAG00000003332) #36 DRAM1 (ENSCSAG00000003324) #37 Rhinopithecus ANCESTRAL SPECIES 97 ENSGT00600000084428.b #21 ENSGT00530000062932.c.a.a.a.a.a.b.b ENSGT00720000108833 #22 ENSGT00880000138031.j #23 ENSGT00940000158187 #24 ENSGT00940000158037 #25 ENSGT00390000014405.f.b ENSGT00940000159389 #26 ENSGT00940000158600 #27 ENSGT00940000155166.A #28 ENSGT00390000016813 #30 ENSGT00940000155118 #31 ENSGT00940000155067.a.a.a #32 ENSGT00940000158254 #33 ENSGT00950000183117.a.a #34 ENSGT00390000000062.x.a #35 ENSGT00390000006747 #36 ENSGT01030000234578.B.a #37 Golden snub-nosed monkey MODERN SPECIES 2437 ENSRROG00000002184 #17 BLTP3B (ENSRROG00000035458) #21 ENSRROG00000033398 ACTR6 (ENSRROG00000042456) #22 SCYL2 (ENSRROG00000045785) #23 SLC17A8 (ENSRROG00000034592) #24 NR1H4 (ENSRROG00000040390) #25 ENSRROG00000033315 GAS2L3 (ENSRROG00000029219) #26 Black snub-nosed monkey MODERN SPECIES 863 ENSRBIG00000032382 GARIN6 (ENSRBIG00000033826) #18 ENSRBIG00000039980 ENSRBIG00000035139 #17 BLTP3B (ENSRBIG00000033336) #21 ENSRBIG00000031056 ACTR6 (ENSRBIG00000035135) #22 SCYL2 (ENSRBIG00000029723) #23 SLC17A8 (ENSRBIG00000027160) #24 NR1H4 (ENSRBIG00000033064) #25 ENSRBIG00000039933 GAS2L3 (ENSRBIG00000028898) #26 ANO4 (ENSRBIG00000030209) #27 SLC5A8 (ENSRBIG00000026396) #28 UTP20 (ENSRBIG00000025384) #30 ARL1 (ENSRBIG00000042560) #31 MYBPC1 (ENSRBIG00000005217) #33 CHPT1 (ENSRBIG00000042339) #34 SYCP3 (ENSRBIG00000031659) #35 SH3RF3 (ENSRBIG00000035937) SEPTIN10 (ENSRBIG00000039970) Platyrrhini ANCESTRAL SPECIES 6 ENSGT00940000156375 ENSGT00940000153272.a.b.p.a ENSGT00940000157129 #7 ENSGT00940000155834 #8 ENSGT00940000162446 ENSGT00390000001561 #11 ENSGT00940000154098.a.d #12 ENSGT00390000008708.p #13 ENSGT00500000045001 #14 ENSGT00940000157710 #15 ENSGT00940000154572.`c #17 ENSGT00910000147278 ENSGT00940000163320 #18 ENSGT00600000084428.b #21 ENSGT00530000062932.c.a.a.a.b.b.a.b.a.b ENSGT00720000108833 #22 ENSGT00950000182976.a.a ENSGT00880000138031.i #23 ENSGT00940000158187 #24 ENSGT00940000158037 #25 ENSGT00940000159389 #26 ENSGT00940000158600 #27 ENSGT00940000155166.A #28 ENSGT00390000016813 #30 ENSGT00940000155118 #31 ENSGT00940000155067.a #32 ENSGT00940000158254 #33 ENSGT00950000183117.a.a #34 ENSGT00390000000062.x.a #35 ENSGT00390000006747 #36 ENSGT01030000234578.B.a #37 Cebidae ANCESTRAL SPECIES 2 ENSGT00390000009047.b ENSGT00940000156375 ENSGT00940000153272.a.b.p.a ENSGT00940000157129 #7 ENSGT00940000155834 #8 ENSGT00940000162446 ENSGT00390000001561 #11 ENSGT00940000154098.a.d #12 ENSGT00390000008708.p #13 ENSGT00500000045001 #14 ENSGT00940000157710 #15 ENSGT00940000154572.`c #17 ENSGT00940000163320 #18 ENSGT00600000084428.b #21 ENSGT00530000062932.c.a.a.a.b.b.a.b.a.b ENSGT00720000108833 #22 ENSGT00950000182976.a.a ENSGT00880000138031.i #23 ENSGT00940000158187 #24 ENSGT00940000158037 #25 ENSGT00940000159389 #26 ENSGT00940000158600 #27 ENSGT00940000155166.A #28 ENSGT00390000016813 #30 ENSGT00940000155118 #31 ENSGT00940000155067.a #32 ENSGT00940000158254 #33 ENSGT00950000183117.a.a #34 ENSGT00390000000062.x.a #35 ENSGT00390000006747 #36 ENSGT01030000234578.B.a #37 Marmoset MODERN SPECIES 21 ELK3 (ENSCJAG00000002592) #7 ENSCJAG00000076158 CDK17 (ENSCJAG00000002538) #8 CFAP54 (ENSCJAG00000002500) NEDD1 (ENSCJAG00000002430) #11 ENSCJAG00000074115 ENSCJAG00000002421 #12 ENSCJAG00000002392 #13 IKBIP (ENSCJAG00000002387) #14 APAF1 (ENSCJAG00000002341) #15 ANKS1B (ENSCJAG00000002273) #17 ENSCJAG00000078320 GARIN6 (ENSCJAG00000002335) #18 BLTP3B (ENSCJAG00000002230) #21 ENSCJAG00000082439 ACTR6 (ENSCJAG00000002192) #22 ENSCJAG00000002141 #23 NR1H4 (ENSCJAG00000002087) #25 ENSCJAG00000070677 GAS2L3 (ENSCJAG00000002065) #26 ANO4 (ENSCJAG00000001995) #27 SLC5A8 (ENSCJAG00000001983) #28 UTP20 (ENSCJAG00000001913) #30 ARL1 (ENSCJAG00000001966) #31 ENSCJAG00000056099 ENSCJAG00000074317 SPIC (ENSCJAG00000001906) #32 ENSCJAG00000078786 ENSCJAG00000072908 MYBPC1 (ENSCJAG00000001676) #33 CHPT1 (ENSCJAG00000001667) #34 Cebidae_a ANCESTRAL SPECIES 8 ENSGT00390000009047.b ENSGT00940000156375 ENSGT00940000153272.a.b.p.a ENSGT00940000157129 #7 ENSGT00940000155834 #8 ENSGT00940000162446 ENSGT00390000001561 #11 ENSGT00940000154098.a.d #12 ENSGT00390000008708.p #13 ENSGT00500000045001 #14 ENSGT00940000157710 #15 ENSGT00940000154572.`c #17 ENSGT00940000163320 #18 ENSGT00600000084428.b #21 ENSGT00530000062932.c.a.a.a.b.b.a.b.a.b ENSGT00720000108833 #22 ENSGT00950000182976.a.a ENSGT00880000138031.i #23 ENSGT00940000158187 #24 ENSGT00940000158037 #25 ENSGT00940000159389 #26 ENSGT00940000158600 #27 ENSGT00940000155166.A #28 ENSGT00390000016813 #30 ENSGT00940000155118 #31 ENSGT00940000155067.a #32 ENSGT00390000018868.A.c.b ENSGT00940000158254 #33 ENSGT00950000183117.a.a #34 ENSGT00390000000062.x.a #35 ENSGT00390000006747 #36 Capuchin MODERN SPECIES 18 CDK17 (ENSCCAG00000031013) #8 ENSCCAG00000030942 CFAP54 (ENSCCAG00000030981) NEDD1 (ENSCCAG00000021182) #11 ENSCCAG00000037273 ENSCCAG00000021602 #12 ENSCCAG00000019847 ENSCCAG00000001210 ENSCCAG00000021600 #13 IKBIP (ENSCCAG00000035750) #14 APAF1 (ENSCCAG00000036130) #15 ANKS1B (ENSCCAG00000032069) #17 FAM71C (ENSCCAG00000035595) #18 UHRF1BP1L (ENSCCAG00000037649) #21 ENSCCAG00000037286 ACTR6 (ENSCCAG00000024707) #22 ENSCCAG00000031769 ENSCCAG00000008128 #23 SLC17A8 (ENSCCAG00000001913) #24 NR1H4 (ENSCCAG00000021055) #25 GAS2L3 (ENSCCAG00000037369) #26 ANO4 (ENSCCAG00000034484) #27 ENSCCAG00000018652 ENSCCAG00000000039 SLC5A8 (ENSCCAG00000019178) #28 UTP20 (ENSCCAG00000031422) #30 ARL1 (ENSCCAG00000025938) #31 SPIC (ENSCCAG00000023632) #32 ENSCCAG00000011395 MYBPC1 (ENSCCAG00000034345) #33 CHPT1 (ENSCCAG00000021551) #34 Bolivian squirrel monkey MODERN SPECIES 76 LTA4H (ENSSBOG00000032578) ENSSBOG00000034818 ELK3 (ENSSBOG00000033992) #7 CDK17 (ENSSBOG00000023998) #8 ENSSBOG00000027979 CFAP54 (ENSSBOG00000024712) NEDD1 (ENSSBOG00000032018) #11 ENSSBOG00000022813 #12 ENSSBOG00000035474 #13 IKBIP (ENSSBOG00000030243) #14 APAF1 (ENSSBOG00000031901) #15 ANKS1B (ENSSBOG00000032447) #17 GARIN6 (ENSSBOG00000024096) #18 BLTP3B (ENSSBOG00000024132) #21 ENSSBOG00000019564 ACTR6 (ENSSBOG00000022083) #22 ENSSBOG00000023923 ENSSBOG00000030821 #23 SLC17A8 (ENSSBOG00000035794) #24 NR1H4 (ENSSBOG00000021182) #25 GAS2L3 (ENSSBOG00000035385) #26 ANO4 (ENSSBOG00000031410) #27 ENSSBOG00000031381 SLC5A8 (ENSSBOG00000033836) #28 UTP20 (ENSSBOG00000035762) #30 ENSSBOG00000024352 #31 SPIC (ENSSBOG00000031070) #32 ENSSBOG00000025315 MYBPC1 (ENSSBOG00000024613) #33 CHPT1 (ENSSBOG00000023502) #34 SYCP3 (ENSSBOG00000035026) #35 Mas night monkey MODERN SPECIES 844 ELK3 (ENSANAG00000036471) #7 CDK17 (ENSANAG00000033442) #8 ENSANAG00000036190 ENSANAG00000030628 CFAP54 (ENSANAG00000033133) NEDD1 (ENSANAG00000023249) #11 ENSANAG00000031573 #12 ENSANAG00000019441 #13 IKBIP (ENSANAG00000029855) #14 ENSANAG00000028428 APAF1 (ENSANAG00000025094) #15 ENSANAG00000026705 GARIN6 (ENSANAG00000031553) #18 ANKS1B (ENSANAG00000020547) #17 BLTP3B (ENSANAG00000021484) #21 ACTR6 (ENSANAG00000027199) #22 DEPDC4 (ENSANAG00000036231) ENSANAG00000028938 #23 SLC17A8 (ENSANAG00000030963) #24 NR1H4 (ENSANAG00000030336) #25 GAS2L3 (ENSANAG00000025902) #26 ENSANAG00000025598 ENSANAG00000026695 ANO4 (ENSANAG00000033189) #27 SLC5A8 (ENSANAG00000033997) #28 UTP20 (ENSANAG00000027152) #30 ARL1 (ENSANAG00000023491) #31 SPIC (ENSANAG00000024577) #32 ENSANAG00000024431 MYBPC1 (ENSANAG00000025760) #33 CHPT1 (ENSANAG00000023069) #34 Tarsier MODERN SPECIES 5602 BLTP3B (ENSTSYG00000006935) #21 ACTR6 (ENSTSYG00000009834) #22 ENSTSYG00000012935 SCYL2 (ENSTSYG00000013692) #23 SLC17A8 (ENSTSYG00000001910) #24 NR1H4 (ENSTSYG00000002997) #25 GAS2L3 (ENSTSYG00000011057) #26 ENSTSYG00000030797 ENSTSYG00000030168 ANO4 (ENSTSYG00000012244) #27 SLC5A8 (ENSTSYG00000011242) #28 UTP20 (ENSTSYG00000003040) #30 Strepsirrhini ANCESTRAL SPECIES 3 ENSGT00940000153110.B ENSGT00390000008645 ENSGT00390000009047.b ENSGT00940000156375 ENSGT00940000157129 #7 ENSGT00940000155834 #8 ENSGT00940000162446 ENSGT00390000001561 #11 ENSGT00940000154098.a.d #12 ENSGT00390000008708 #13 ENSGT00500000045001 #14 ENSGT00940000157710 #15 ENSGT00940000154572.`c #17 ENSGT00940000163320 #18 ENSGT00600000084428.b #21 ENSGT00720000108833 #22 ENSGT00950000182976.a.a ENSGT00880000138031 #23 ENSGT00940000158187 #24 ENSGT00940000158037 #25 ENSGT00940000159389 #26 ENSGT00940000158600 #27 ENSGT00940000155166.A #28 ENSGT00390000016813 #30 ENSGT00940000155118 #31 ENSGT00940000155067.a #32 ENSGT00940000158254 #33 ENSGT00950000183117.a.a #34 ENSGT00390000000062.x.a #35 ENSGT00390000006747 #36 ENSGT01030000234578.B.a #37 Lemuriformes ANCESTRAL SPECIES 1 ENSGT00940000153110.B ENSGT00390000008645 ENSGT00390000009047.b ENSGT00940000156375 ENSGT00940000157129 #7 ENSGT00940000155834 #8 ENSGT00940000162446 ENSGT00390000001561 #11 ENSGT00940000154098.a.d #12 ENSGT00390000008708 #13 ENSGT00500000045001 #14 ENSGT00940000157710 #15 ENSGT00940000154572.`c #17 ENSGT00940000163320 #18 ENSGT00600000084428.b #21 ENSGT00720000108833 #22 ENSGT00950000182976.a.a ENSGT00880000138031 #23 ENSGT00940000158187 #24 ENSGT00940000158037 #25 ENSGT00940000159389 #26 ENSGT00940000158600 #27 ENSGT00940000155166.A #28 ENSGT00390000016813 #30 ENSGT00940000155118 #31 ENSGT00940000155067.a #32 ENSGT00940000158254 #33 ENSGT00950000183117.a.a #34 ENSGT00390000000062.x.a #35 ENSGT00390000006747 #36 ENSGT01030000234578.B.a #37 Mouse lemur DUPLICATION Mouse lemur MODERN SPECIES 29 AMDHD1 (ENSMICG00000012168) HAL (ENSMICG00000012174) LTA4H (ENSMICG00000012198) ELK3 (ENSMICG00000012211) #7 CDK17 (ENSMICG00000005540) #8 CFAP54 (ENSMICG00000015286) NEDD1 (ENSMICG00000015320) #11 ENSMICG00000031893 #12 SLC25A3 (ENSMICG00000045036) #13 IKBIP (ENSMICG00000026540) #14 ENSMICG00000003528 #15 ENSMICG00000032726 GARIN6 (ENSMICG00000030013) #18 ANKS1B (ENSMICG00000003540) #17 BLTP3B (ENSMICG00000010210) #21 ENSMICG00000016393 #22 DEPDC4 (ENSMICG00000016407) ENSMICG00000016414 #23 SLC17A8 (ENSMICG00000001586) #24 NR1H4 (ENSMICG00000013522) #25 GAS2L3 (ENSMICG00000042318) #26 ENSMICG00000030149 ENSMICG00000047865 #27 SLC5A8 (ENSMICG00000029503) #28 UTP20 (ENSMICG00000015736) #30 ARL1 (ENSMICG00000015801) #31 SPIC (ENSMICG00000044168) #32 MYBPC1 (ENSMICG00000012018) #33 CHPT1 (ENSMICG00000012038) #34 SYCP3 (ENSMICG00000046057) #35 GNPTAB (ENSMICG00000012048) #36 Mouse lemur MODERN SPECIES 29 SLC25A18 (ENSMICG00000045514) ATP6V1E1 (ENSMICG00000010643) ENSMICG00000033584 BCL2L13 (ENSMICG00000038457) BID (ENSMICG00000008670) MICAL3 (ENSMICG00000017231) ENSMICG00000027162 ENSMICG00000046256 PEX26 (ENSMICG00000037834) ENSMICG00000046336 TUBA8 (ENSMICG00000017239) OR6C75 (ENSMICG00000047731) ENSMICG00000031233 ENSMICG00000010469 ENSMICG00000042889 ENSMICG00000026575 #22 ENSMICG00000017826 ENSMICG00000008320 TESPA1 (ENSMICG00000038700) PPP1R1A (ENSMICG00000008492) PDE1B (ENSMICG00000043971) NCKAP1L (ENSMICG00000008453) GTSF1 (ENSMICG00000008444) ITGA5 (ENSMICG00000008420) ZNF385A (ENSMICG00000037401) COPZ1 (ENSMICG00000008401) NFE2 (ENSMICG00000031522) HNRNPA1 (ENSMICG00000032477) CBX5 (ENSMICG00000041561) ENSMICG00000026511 ENSMICG00000034005 Lemuriformes_a ANCESTRAL SPECIES 47 ENSGT00940000153110.B ENSGT00390000008645 ENSGT00390000009047.b ENSGT00940000156375 ENSGT00940000157129 #7 ENSGT00940000155834 #8 ENSGT00940000162446 ENSGT00390000001561 #11 ENSGT00940000154098.a.d #12 ENSGT00390000008708 #13 ENSGT00500000045001 #14 ENSGT00940000157710 #15 ENSGT00940000154572.`c #17 ENSGT00940000163320 #18 ENSGT00600000084428.b #21 ENSGT00720000108833 #22 ENSGT00950000182976.a.a ENSGT00880000138031 #23 ENSGT00940000158187 #24 ENSGT00940000158037 #25 ENSGT00940000159389 #26 ENSGT00940000158600 #27 ENSGT00940000155166.A #28 ENSGT00390000016813 #30 ENSGT00940000155118 #31 ENSGT00940000155067.a #32 ENSGT00940000158254 #33 ENSGT00950000183117.a.a #34 ENSGT00390000000062.x.a #35 ENSGT00390000006747 #36 ENSGT01030000234578.B.a #37 Coquerels sifaka DUPLICATION Coquerels sifaka MODERN SPECIES 968 CCDC38 (ENSPCOG00000028122) AMDHD1 (ENSPCOG00000010352) HAL (ENSPCOG00000027988) LTA4H (ENSPCOG00000016371) ELK3 (ENSPCOG00000003335) #7 CDK17 (ENSPCOG00000014977) #8 CFAP54 (ENSPCOG00000024189) NEDD1 (ENSPCOG00000022969) #11 ENSPCOG00000027549 #12 SLC25A3 (ENSPCOG00000014902) #13 IKBIP (ENSPCOG00000027241) #14 APAF1 (ENSPCOG00000020485) #15 GARIN6 (ENSPCOG00000022737) #18 ANKS1B (ENSPCOG00000020608) #17 BLTP3B (ENSPCOG00000018808) #21 ENSPCOG00000002696 #22 ENSPCOG00000002628 #22 DEPDC4 (ENSPCOG00000000868) SCYL2 (ENSPCOG00000020693) #23 SLC17A8 (ENSPCOG00000016839) #24 NR1H4 (ENSPCOG00000018446) #25 ANO4 (ENSPCOG00000026667) #27 SLC5A8 (ENSPCOG00000016441) #28 Coquerels sifaka MODERN SPECIES 968 AMDHD1 (ENSPCOG00000010352) HAL (ENSPCOG00000027988) LTA4H (ENSPCOG00000016371) ELK3 (ENSPCOG00000003335) #7 CDK17 (ENSPCOG00000014977) #8 CFAP54 (ENSPCOG00000024189) NEDD1 (ENSPCOG00000022969) #11 ENSPCOG00000027549 #12 SLC25A3 (ENSPCOG00000014902) #13 IKBIP (ENSPCOG00000027241) #14 APAF1 (ENSPCOG00000020485) #15 GARIN6 (ENSPCOG00000022737) #18 ANKS1B (ENSPCOG00000020608) #17 BLTP3B (ENSPCOG00000018808) #21 ENSPCOG00000002696 #22 ENSPCOG00000002628 #22 DEPDC4 (ENSPCOG00000000868) SCYL2 (ENSPCOG00000020693) #23 SLC17A8 (ENSPCOG00000016839) #24 NR1H4 (ENSPCOG00000018446) #25 ANO4 (ENSPCOG00000026667) #27 SLC5A8 (ENSPCOG00000016441) #28 Greater bamboo lemur MODERN SPECIES 735 ENSPSMG00000016116 #12 SLC25A3 (ENSPSMG00000016005) #13 IKBIP (ENSPSMG00000015923) #14 APAF1 (ENSPSMG00000015780) #15 GARIN6 (ENSPSMG00000015346) #18 ANKS1B (ENSPSMG00000014986) #17 BLTP3B (ENSPSMG00000014572) #21 ACTR6 (ENSPSMG00000014479) #22 DEPDC4 (ENSPSMG00000014424) SCYL2 (ENSPSMG00000014364) #23 SLC17A8 (ENSPSMG00000014214) #24 NR1H4 (ENSPSMG00000014187) #25 GAS2L3 (ENSPSMG00000014137) #26 ANO4 (ENSPSMG00000014062) #27 SLC5A8 (ENSPSMG00000013925) #28 UTP20 (ENSPSMG00000013883) #30 ARL1 (ENSPSMG00000013774) #31 SPIC (ENSPSMG00000013707) #32 MYBPC1 (ENSPSMG00000013038) #33 CHPT1 (ENSPSMG00000012658) #34 SYCP3 (ENSPSMG00000012646) #35 GNPTAB (ENSPSMG00000012631) #36 DRAM1 (ENSPSMG00000012608) #37 Bushbaby MODERN SPECIES 122 ELK3 (ENSOGAG00000031899) #7 CDK17 (ENSOGAG00000007484) #8 ENSOGAG00000012022 #9 ENSOGAG00000024990 ENSOGAG00000005823 NEDD1 (ENSOGAG00000005824) #11 ENSOGAG00000012220 #12 SLC25A3 (ENSOGAG00000012222) #13 ENSOGAG00000028619 #14 IKBIP (ENSOGAG00000012226) #14 APAF1 (ENSOGAG00000012229) #15 ENSOGAG00000025146 #17 GARIN6 (ENSOGAG00000006412) #18 ANKS1B (ENSOGAG00000012239) #17 BLTP3B (ENSOGAG00000001738) #21 ACTR6 (ENSOGAG00000001741) #22 ENSOGAG00000026542 DEPDC4 (ENSOGAG00000026205) SCYL2 (ENSOGAG00000007862) #23 SLC17A8 (ENSOGAG00000007870) #24 NR1H4 (ENSOGAG00000007874) #25 GAS2L3 (ENSOGAG00000003680) #26 ANO4 (ENSOGAG00000015111) #27 SLC5A8 (ENSOGAG00000015120) #28 ENSOGAG00000026488 UTP20 (ENSOGAG00000015130) #30 ARL1 (ENSOGAG00000015144) #31 SPIC (ENSOGAG00000015148) #32 MYBPC1 (ENSOGAG00000001204) #33 CHPT1 (ENSOGAG00000001207) #34 SYCP3 (ENSOGAG00000024543) #35 Laurasiatheria ANCESTRAL SPECIES 6 ENSGT00390000009047.b ENSGT00940000156375 ENSGT00940000157129 #7 ENSGT00940000155834 #8 ENSGT00940000162970 #9 ENSGT01030000235320 #10 ENSGT00940000162446 ENSGT00390000001561 #11 ENSGT00940000154098.a.d #12 ENSGT00390000008708 #13 ENSGT00500000045001 #14 ENSGT00940000157710 #15 ENSGT00940000154572.`c #17 ENSGT00940000163320 #18 ENSGT00600000084428.b #21 ENSGT00720000108833 #22 ENSGT00950000182976.a.a ENSGT00880000138031 #23 ENSGT00940000158187 #24 ENSGT00940000158037 #25 ENSGT00940000159389 #26 ENSGT00940000158600 #27 ENSGT00940000155166.A #28 ENSGT00390000016813 #30 ENSGT00940000155118.o #31 ENSGT00940000155067.a #32 ENSGT00940000158254 #33 ENSGT00950000183117.a.a #34 ENSGT00390000000062.x.a #35 ENSGT00390000006747 #36 ENSGT01030000234578.B.a #37 Laurasiatheria_a ANCESTRAL SPECIES 6 ENSGT00390000009047.b ENSGT00940000156375 ENSGT00940000157129 #7 ENSGT00940000155834 #8 ENSGT00940000162970 #9 ENSGT01030000235320 #10 ENSGT00940000162446 ENSGT00390000001561 #11 ENSGT00940000154098.a.d #12 ENSGT00390000008708 #13 ENSGT00500000045001 #14 ENSGT00940000157710 #15 ENSGT00940000154572.`c #17 ENSGT00940000163320 #18 ENSGT00600000084428.b #21 ENSGT00720000108833 #22 ENSGT00950000182976.a.a ENSGT00880000138031 #23 ENSGT00940000158187 #24 ENSGT00940000158037 #25 ENSGT00940000159389 #26 ENSGT00940000158600 #27 ENSGT00940000155166.A #28 ENSGT00390000016813 #30 ENSGT00940000155118.o #31 ENSGT00940000155067.a #32 ENSGT00940000158254 #33 ENSGT00950000183117.a.a #34 ENSGT00390000000062.x.a #35 ENSGT00390000006747 #36 ENSGT01030000234578.B.a #37 Laurasiatheria_b ANCESTRAL SPECIES 6 ENSGT00390000009047.b ENSGT00940000156375 ENSGT00940000157129 #7 ENSGT00940000155834 #8 ENSGT00940000162970 #9 ENSGT01030000235320 #10 ENSGT00940000162446 ENSGT00390000001561 #11 ENSGT00940000154098.a.d #12 ENSGT00390000008708 #13 ENSGT00500000045001 #14 ENSGT00940000157710 #15 ENSGT00940000154572.`c #17 ENSGT00940000163320 #18 ENSGT00600000084428.b #21 ENSGT00720000108833 #22 ENSGT00950000182976.a.a ENSGT00880000138031 #23 ENSGT00940000158187 #24 ENSGT00940000158037 #25 ENSGT00940000159389 #26 ENSGT00940000158600 #27 ENSGT00940000155166.A #28 ENSGT00390000016813 #30 ENSGT00940000155118.o #31 ENSGT00940000155067.a #32 ENSGT00940000158254 #33 ENSGT00950000183117.a.a #34 ENSGT00390000000062.x.a #35 ENSGT00390000006747 #36 ENSGT01030000234578.B.a #37 Carnivora ANCESTRAL SPECIES 3 ENSGT00390000009047.b ENSGT00940000156375 ENSGT00940000157129 #7 ENSGT00940000155834 #8 ENSGT00940000162970 #9 ENSGT01030000235320 #10 ENSGT00940000162446 ENSGT00390000001561 #11 ENSGT00940000154098.a.d #12 ENSGT00390000008708 #13 ENSGT00500000045001 #14 ENSGT00940000157710 #15 ENSGT00940000154572.`c #17 ENSGT00940000163320 #18 ENSGT00600000084428.b #21 ENSGT00720000108833 #22 ENSGT00880000138031 #23 ENSGT00940000158187 #24 ENSGT00940000158037 #25 ENSGT00940000159389 #26 ENSGT00940000158600 #27 ENSGT00940000155166.A #28 ENSGT00390000016813 #30 ENSGT00940000155118.o #31 ENSGT00940000155067.a #32 ENSGT00940000158254 #33 ENSGT00950000183117.a.a #34 ENSGT00390000000062.x.a #35 ENSGT00390000006747 #36 ENSGT01030000234578.B.a #37 ENSGT00390000014084 Felidae ANCESTRAL SPECIES 2 ENSGT00940000153110.B ENSGT00390000008645 ENSGT00390000009047.b ENSGT00940000156375 ENSGT00940000157129 #7 ENSGT00940000155834 #8 ENSGT00940000162446 ENSGT00390000001561 #11 ENSGT00940000154098.a.d #12 ENSGT00390000008708 #13 ENSGT00500000045001 #14 ENSGT00940000157710 #15 ENSGT00940000154572.`c #17 ENSGT00940000163320 #18 ENSGT00600000084428.b #21 ENSGT00720000108833 #22 ENSGT00880000138031 #23 ENSGT00940000158187 #24 ENSGT00940000158037 #25 ENSGT00940000159389 #26 ENSGT00940000158600 #27 ENSGT00940000155166.A #28 ENSGT00390000016813 #30 ENSGT00940000155118.o #31 ENSGT00940000155067.a #32 ENSGT00940000158254 #33 ENSGT00950000183117.a.a #34 ENSGT00390000000062.x.a #35 ENSGT00390000006747 #36 ENSGT01030000234578.B.a #37 ENSGT00390000014084 Panthera ANCESTRAL SPECIES ENSGT00390000008645 ENSGT00390000009047.b ENSGT00940000156375 ENSGT00940000157129 #7 ENSGT00940000155834 #8 ENSGT00940000162446 ENSGT00390000001561 #11 ENSGT00940000154098.a.d #12 ENSGT00390000008708 #13 ENSGT00500000045001 #14 ENSGT00940000157710 #15 ENSGT00940000154572.`c #17 ENSGT00940000163320 #18 ENSGT00910000144211.n.b ENSGT00600000084428.b #21 ENSGT00720000108833 #22 ENSGT00880000138031 #23 ENSGT00940000158187 #24 ENSGT00940000158037 #25 ENSGT00940000159389 #26 ENSGT00940000158600 #27 ENSGT00940000155166.A #28 ENSGT00390000016813 #30 ENSGT00940000155118.o #31 ENSGT00940000155067.a #32 ENSGT00940000158254 #33 ENSGT00950000183117.a.a #34 ENSGT00390000000062.x.a #35 ENSGT00390000006747 #36 ENSGT01030000234578.B.a #37 ENSGT00390000014084 Panthera_a ANCESTRAL SPECIES 12 ENSGT00940000154818.a.a ENSGT00940000153110.B ENSGT00390000008645 ENSGT00390000009047.b ENSGT00940000156375 ENSGT00940000157129 #7 ENSGT00940000155834 #8 ENSGT00940000162446 ENSGT00390000001561 #11 ENSGT00940000154098.a.d #12 ENSGT00390000008708 #13 ENSGT00500000045001 #14 ENSGT00940000157710 #15 ENSGT00940000154572.`c #17 ENSGT00600000084428.b #21 ENSGT00720000108833 #22 ENSGT00880000138031 #23 ENSGT00940000158187 #24 ENSGT00940000158037 #25 ENSGT00940000159389 #26 ENSGT00940000158600 #27 ENSGT00940000155166.A #28 ENSGT00390000016813 #30 ENSGT00940000155118.o #31 ENSGT00940000155067.a #32 ENSGT00940000158254 #33 ENSGT00950000183117.a.a #34 ENSGT00390000000062.x.a #35 ENSGT00390000006747 #36 ENSGT01030000234578.B.a #37 ENSGT00390000014084 lion MODERN SPECIES 7 AMDHD1 (ENSPLOG00000012251) HAL (ENSPLOG00000012331) LTA4H (ENSPLOG00000012778) ELK3 (ENSPLOG00000013162) #7 CDK17 (ENSPLOG00000013254) #8 CFAP54 (ENSPLOG00000013406) NEDD1 (ENSPLOG00000013460) #11 ENSPLOG00000013590 #12 SLC25A3 (ENSPLOG00000013735) #13 IKBIP (ENSPLOG00000013888) #14 APAF1 (ENSPLOG00000013981) #15 ENSPLOG00000014281 #17 GARIN6 (ENSPLOG00000015188) #18 ENSPLOG00000015233 #17 BLTP3B (ENSPLOG00000015400) #21 ACTR6 (ENSPLOG00000015509) #22 SCYL2 (ENSPLOG00000015630) #23 SLC17A8 (ENSPLOG00000015751) #24 NR1H4 (ENSPLOG00000015968) #25 GAS2L3 (ENSPLOG00000016298) #26 ANO4 (ENSPLOG00000016494) #27 SLC5A8 (ENSPLOG00000017103) #28 UTP20 (ENSPLOG00000017260) #30 ARL1 (ENSPLOG00000017729) #31 SPIC (ENSPLOG00000017845) #32 MYBPC1 (ENSPLOG00000018049) #33 CHPT1 (ENSPLOG00000019674) #34 SYCP3 (ENSPLOG00000019730) #35 GNPTAB (ENSPLOG00000019819) #36 ENSPLOG00000019950 #37 WASHC3 (ENSPLOG00000020005) leopard MODERN SPECIES 13 AMDHD1 (ENSPPRG00000004816) HAL (ENSPPRG00000004514) LTA4H (ENSPPRG00000001567) ELK3 (ENSPPRG00000000266) #7 CDK17 (ENSPPRG00000022789) #8 CFAP54 (ENSPPRG00000018732) NEDD1 (ENSPPRG00000011575) #11 ENSPPRG00000007580 #12 SLC25A3 (ENSPPRG00000005899) #13 IKBIP (ENSPPRG00000003826) #14 APAF1 (ENSPPRG00000003220) #15 ENSPPRG00000018210 #17 GARIN6 (ENSPPRG00000011321) #18 ENSPPRG00000010804 #17 BLTP3B (ENSPPRG00000009836) #21 ACTR6 (ENSPPRG00000008867) #22 SCYL2 (ENSPPRG00000007538) #23 SLC17A8 (ENSPPRG00000006251) #24 NR1H4 (ENSPPRG00000004482) #25 GAS2L3 (ENSPPRG00000003634) #26 ANO4 (ENSPPRG00000003419) #27 SLC5A8 (ENSPPRG00000001967) #28 ENSPPRG00000001800 UTP20 (ENSPPRG00000001026) #30 ARL1 (ENSPPRG00000023908) #31 SPIC (ENSPPRG00000018294) #32 MYBPC1 (ENSPPRG00000015376) #33 CHPT1 (ENSPPRG00000005602) #34 SYCP3 (ENSPPRG00000005146) #35 GNPTAB (ENSPPRG00000004479) #36 DRAM1 (ENSPPRG00000002977) #37 Tiger MODERN SPECIES 229 HAL (ENSPTIG00000011595) LTA4H (ENSPTIG00000014149) ELK3 (ENSPTIG00000015155) #7 CDK17 (ENSPTIG00000016038) #8 CFAP54 (ENSPTIG00000018945) NEDD1 (ENSPTIG00000021449) #11 ENSPTIG00000008730 #12 SLC25A3 (ENSPTIG00000011200) #13 IKBIP (ENSPTIG00000015567) #14 APAF1 (ENSPTIG00000016200) #15 ENSPTIG00000021952 #17 GARIN6 (ENSPTIG00000006653) #18 ENSPTIG00000006936 #17 ENSPTIG00000007650 BLTP3B (ENSPTIG00000009469) #21 ACTR6 (ENSPTIG00000012245) #22 SCYL2 (ENSPTIG00000013119) #23 SLC17A8 (ENSPTIG00000014917) #24 NR1H4 (ENSPTIG00000016103) #25 GAS2L3 (ENSPTIG00000017778) #26 ANO4 (ENSPTIG00000018267) #27 SLC5A8 (ENSPTIG00000020155) #28 UTP20 (ENSPTIG00000020972) #30 ENSPTIG00000002154 #31 SPIC (ENSPTIG00000002890) #32 MYBPC1 (ENSPTIG00000005437) #33 CHPT1 (ENSPTIG00000010811) #34 SYCP3 (ENSPTIG00000011557) #35 GNPTAB (ENSPTIG00000012080) #36 DRAM1 (ENSPTIG00000013781) #37 WASHC3 (ENSPTIG00000014177) Cat MODERN SPECIES 238 AMDHD1 (ENSFCAG00000005404) HAL (ENSFCAG00000005407) LTA4H (ENSFCAG00000018521) ELK3 (ENSFCAG00000010747) #7 CDK17 (ENSFCAG00000027060) #8 CFAP54 (ENSFCAG00000011027) NEDD1 (ENSFCAG00000031627) #11 TMPO (ENSFCAG00000030306) #12 SLC25A3 (ENSFCAG00000027994) #13 IKBIP (ENSFCAG00000040544) #14 APAF1 (ENSFCAG00000010807) #15 ANKS1B (ENSFCAG00000040012) #17 ENSFCAG00000049184 GARIN6 (ENSFCAG00000027306) #18 BLTP3B (ENSFCAG00000004669) #21 ACTR6 (ENSFCAG00000025056) #22 SCYL2 (ENSFCAG00000028913) #23 SLC17A8 (ENSFCAG00000018638) #24 NR1H4 (ENSFCAG00000006469) #25 GAS2L3 (ENSFCAG00000023152) #26 ANO4 (ENSFCAG00000006147) #27 SLC5A8 (ENSFCAG00000031580) #28 UTP20 (ENSFCAG00000006150) #30 ARL1 (ENSFCAG00000030871) #31 SPIC (ENSFCAG00000034240) #32 MYBPC1 (ENSFCAG00000025799) #33 GNPTAB (ENSFCAG00000008281) #36 CHPT1 (ENSFCAG00000030275) #34 SYCP3 (ENSFCAG00000024568) #35 ENSFCAG00000041340 #37 WASHC3 (ENSFCAG00000019358) Caniformia ANCESTRAL SPECIES 20 ENSGT00390000009047.b ENSGT00940000156375 ENSGT00940000157129 #7 ENSGT00940000155834 #8 ENSGT00940000162970 #9 ENSGT01030000235320 #10 ENSGT00940000162446 ENSGT00390000001561 #11 ENSGT00940000154098.a.d #12 ENSGT00390000008708 #13 ENSGT00500000045001 #14 ENSGT00940000157710 #15 ENSGT00940000154572.`c #17 ENSGT00940000163320 #18 ENSGT00600000084428.b #21 ENSGT00720000108833 #22 ENSGT00880000138031 #23 ENSGT00940000158187 #24 ENSGT00940000158037 #25 ENSGT00940000159389 #26 ENSGT00940000158600 #27 ENSGT00940000155166.A #28 ENSGT00390000016813 #30 ENSGT00940000155118.o #31 ENSGT00940000155067.a #32 ENSGT00940000158254 #33 ENSGT00950000183117.a.a #34 ENSGT00390000000062.x.a #35 ENSGT00390000006747 #36 ENSGT01030000234578.B.a #37 ENSGT00390000014084 Canidae ANCESTRAL SPECIES 12 ENSGT00940000153110.B ENSGT00390000008645 ENSGT00390000009047.b ENSGT00940000156375 ENSGT00940000157129 #7 ENSGT00940000155834 #8 ENSGT00940000162446 ENSGT00390000001561 #11 ENSGT00940000154098.a.d #12 ENSGT00390000008708 #13 ENSGT00500000045001 #14 ENSGT00940000157710 #15 ENSGT00940000154572.`c #17 ENSGT00910000144211.n.b.d ENSGT00600000084428.b #21 ENSGT00720000108833 #22 ENSGT00880000138031 #23 ENSGT00940000158187 #24 ENSGT00940000158037 #25 ENSGT00940000159389 #26 ENSGT00940000158600 #27 ENSGT00940000155166.A #28 ENSGT00390000016813 #30 ENSGT00940000155118.o #31 ENSGT00940000155067.a #32 ENSGT00940000158254 #33 ENSGT00950000183117.a.a #34 ENSGT00390000000062.x.a #35 ENSGT00390000006747 #36 ENSGT01030000234578.B.a #37 ENSGT00390000014084 Canis_lupus ANCESTRAL SPECIES 16 ENSGT00390000008645 ENSGT00390000009047.b ENSGT00940000156375 ENSGT00940000157129 #7 ENSGT00940000155834 #8 ENSGT00390000009819.a.b.a.a.a.a.a.eb.a ENSGT00940000153783.a ##16 ENSGT00390000001561 #11 ENSGT00940000154098.a.d #12 ENSGT00390000008708.rb #13 ENSGT00500000045001 #14 ENSGT00940000157710 #15 ENSGT00940000154572.`c #17 ENSGT00910000144211.n.b.d ENSGT00600000084428.b #21 ENSGT00720000108833 #22 ENSGT00880000138031 #23 ENSGT00940000158187 #24 ENSGT00940000158037 #25 ENSGT00940000154037.B.ab ENSGT00940000159389 #26 ENSGT00940000158600 #27 ENSGT00530000063516.a.a.c.a ENSGT00940000155166.A #28 ENSGT00390000016813 #30 ENSGT00940000155118.o #31 ENSGT00940000155067.a #32 ENSGT00940000158254 #33 ENSGT00950000183117.a.a #34 ENSGT00390000000062.x.a #35 ENSGT00390000006747 #36 Dingo MODERN SPECIES 277 ENSCAFG00020023725 ENSCAFG00020023728 #9 ENSCAFG00020023734 ##16 ENSCAFG00020023735 #11 ENSCAFG00020023737 #11 ENSCAFG00020023754 #12 ENSCAFG00020023755 #13 ENSCAFG00020023757 #14 APAF1 (ENSCAFG00020023804) #15 ENSCAFG00020024199 ENSCAFG00020024201 #17 ENSCAFG00020024207 ENSCAFG00020024208 #17 ENSCAFG00020024210 BLTP3B (ENSCAFG00020024212) #21 ACTR6 (ENSCAFG00020024231) #22 SCYL2 (ENSCAFG00020024232) #23 SLC17A8 (ENSCAFG00020024245) #24 NR1H4 (ENSCAFG00020024269) #25 ENSCAFG00020024277 GAS2L3 (ENSCAFG00020024280) #26 ANO4 (ENSCAFG00020024282) #27 ENSCAFG00020024291 SLC5A8 (ENSCAFG00020024296) #28 UTP20 (ENSCAFG00020024305) #30 ARL1 (ENSCAFG00020024333) #31 SPIC (ENSCAFG00020024334) #32 MYBPC1 (ENSCAFG00020024354) #33 CHPT1 (ENSCAFG00020024435) #34 SYCP3 (ENSCAFG00020024465) #35 GNPTAB (ENSCAFG00020024471) #36 Dog MODERN SPECIES 6 ENSCAFG00845025679 CFAP54 (ENSCAFG00845025772) ENSCAFG00845026114 ENSCAFG00845026133 ##16 NEDD1 (ENSCAFG00845026200) #11 TMPO (ENSCAFG00845026620) #12 SLC25A3 (ENSCAFG00845026910) #13 IKBIP (ENSCAFG00845027049) #14 APAF1 (ENSCAFG00845027232) #15 ANKS1B (ENSCAFG00845027643) #17 ENSCAFG00845027984 GARIN6 (ENSCAFG00845005702) #18 ENSCAFG00845005730 #17 ENSCAFG00845005753 BLTP3B (ENSCAFG00845005817) #21 ACTR6 (ENSCAFG00845005922) #22 ENSCAFG00845006004 SCYL2 (ENSCAFG00845006069) #23 SLC17A8 (ENSCAFG00845006328) #24 NR1H4 (ENSCAFG00845006398) #25 ENSCAFG00845006472 GAS2L3 (ENSCAFG00845006511) #26 ANO4 (ENSCAFG00845006701) #27 ENSCAFG00845007104 SLC5A8 (ENSCAFG00845007150) #28 UTP20 (ENSCAFG00845007280) #30 ARL1 (ENSCAFG00845007593) #31 SPIC (ENSCAFG00845007650) #32 MYBPC1 (ENSCAFG00845007866) #33 CHPT1 (ENSCAFG00845008274) #34 GNPTAB (ENSCAFG00845008537) #36 Red fox MODERN SPECIES 95 ELK3 (ENSVVUG00000018961) #7 CDK17 (ENSVVUG00000018938) #8 CFAP54 (ENSVVUG00000018862) ENSVVUG00000018854 NEDD1 (ENSVVUG00000018845) #11 ENSVVUG00000018822 ENSVVUG00000018771 TMPO (ENSVVUG00000018704) #12 SLC25A3 (ENSVVUG00000018699) #13 IKBIP (ENSVVUG00000018697) #14 APAF1 (ENSVVUG00000018651) #15 ENSVVUG00000018626 ENSVVUG00000018614 ANKS1B (ENSVVUG00000018575) #17 UHRF1BP1L (ENSVVUG00000018560) #21 ACTR6 (ENSVVUG00000018549) #22 SCYL2 (ENSVVUG00000018531) #23 SLC17A8 (ENSVVUG00000018524) #24 NR1H4 (ENSVVUG00000018520) #25 GAS2L3 (ENSVVUG00000018519) #26 ANO4 (ENSVVUG00000018492) #27 ENSVVUG00000018488 SLC5A8 (ENSVVUG00000018468) #28 UTP20 (ENSVVUG00000018110) #30 ARL1 (ENSVVUG00000018044) #31 SPIC (ENSVVUG00000018039) #32 MYBPC1 (ENSVVUG00000018029) #33 CHPT1 (ENSVVUG00000018026) #34 SYCP3 (ENSVVUG00000018021) #35 GNPTAB (ENSVVUG00000018000) #36 DRAM1 (ENSVVUG00000017987) #37 Caniformia_b ANCESTRAL SPECIES 18 ENSGT00390000009047.b ENSGT00940000156375 ENSGT00940000157129 #7 ENSGT00940000155834 #8 ENSGT00940000162970 #9 ENSGT01030000235320 #10 ENSGT00940000162446 ENSGT00390000001561 #11 ENSGT00940000154098.a.d #12 ENSGT00390000008708 #13 ENSGT00500000045001 #14 ENSGT00940000157710 #15 ENSGT00940000154572.`c #17 ENSGT00940000163320 #18 ENSGT00600000084428.b #21 ENSGT00720000108833 #22 ENSGT00880000138031 #23 ENSGT00940000158187 #24 ENSGT00940000158037 #25 ENSGT00940000159389 #26 ENSGT00940000158600 #27 ENSGT00940000155166.A #28 ENSGT00390000016813 #30 ENSGT00940000155118.o #31 ENSGT00940000155067.a #32 ENSGT00940000158254 #33 ENSGT00950000183117.a.a #34 ENSGT00390000000062.x.a #35 ENSGT00390000006747 #36 ENSGT01030000234578.B.a #37 ENSGT00390000014084 Mustelinae ANCESTRAL SPECIES 4 ENSGT00390000008645 ENSGT00390000009047.b ENSGT00940000156375 ENSGT00940000157129 #7 ENSGT00940000155834 #8 ENSGT00940000162970 #9 ENSGT01030000235320 #10 ENSGT00390000001561 #11 ENSGT00940000154098.a.d #12 ENSGT00390000008708 #13 ENSGT00500000045001 #14 ENSGT00940000157710 #15 ENSGT00940000154572.`c #17 ENSGT00940000163320 #18 ENSGT00600000084428.b #21 ENSGT00720000108833 #22 ENSGT00880000138031 #23 ENSGT00940000158187 #24 ENSGT00940000158037 #25 ENSGT00940000159389 #26 ENSGT00940000158600 #27 ENSGT00940000155166.A #28 ENSGT00390000016813 #30 ENSGT00940000155118.o #31 ENSGT00940000155067.a #32 ENSGT00940000158254 #33 ENSGT00950000183117.a.a #34 ENSGT00390000000062.x.a.i #35 ENSGT00390000006747 #36 ENSGT01030000234578.B.a #37 ENSGT00390000014084 American mink MODERN SPECIES 20 LTA4H (ENSNVIG00000007918) ELK3 (ENSNVIG00000008034) #7 CDK17 (ENSNVIG00000008059) #8 ENSNVIG00000008171 #9 ENSNVIG00000008188 #10 NEDD1 (ENSNVIG00000008215) #11 ENSNVIG00000008275 ENSNVIG00000008369 #12 SLC25A3 (ENSNVIG00000008484) #13 IKBIP (ENSNVIG00000008542) #14 ENSNVIG00000008570 #15 ENSNVIG00000008653 #17 GARIN6 (ENSNVIG00000008922) #18 ENSNVIG00000008928 #17 BLTP3B (ENSNVIG00000008957) #21 ACTR6 (ENSNVIG00000009003) #22 SCYL2 (ENSNVIG00000009103) #23 SLC17A8 (ENSNVIG00000009152) #24 NR1H4 (ENSNVIG00000009191) #25 GAS2L3 (ENSNVIG00000009253) #26 ENSNVIG00000009266 ANO4 (ENSNVIG00000009287) #27 SLC5A8 (ENSNVIG00000009429) #28 UTP20 (ENSNVIG00000009480) #30 ARL1 (ENSNVIG00000009572) #31 SPIC (ENSNVIG00000009598) #32 MYBPC1 (ENSNVIG00000009645) #33 CHPT1 (ENSNVIG00000010091) #34 ENSNVIG00000010099 #35 GNPTAB (ENSNVIG00000010138) #36 DRAM1 (ENSNVIG00000010221) #37 Ferret MODERN SPECIES 171 TMPO (ENSMPUG00000011379) ##12 SLC25A3 (ENSMPUG00000011387) #13 ENSMPUG00000011443 #14 APAF1 (ENSMPUG00000011447) #15 ENSMPUG00000011453 #17 ENSMPUG00000011491 #17 GARIN6 (ENSMPUG00000011498) #18 BLTP3B (ENSMPUG00000011501) #21 ACTR6 (ENSMPUG00000011507) #22 SCYL2 (ENSMPUG00000011551) #23 SLC17A8 (ENSMPUG00000011560) #24 NR1H4 (ENSMPUG00000011573) #25 GAS2L3 (ENSMPUG00000011580) #26 ENSMPUG00000011612 ANO4 (ENSMPUG00000011618) #27 SLC5A8 (ENSMPUG00000011632) #28 UTP20 (ENSMPUG00000011641) #30 ARL1 (ENSMPUG00000011822) #31 SPIC (ENSMPUG00000011857) #32 MYBPC1 (ENSMPUG00000011862) #33 CHPT1 (ENSMPUG00000011874) #34 GNPTAB (ENSMPUG00000011877) #36 DRAM1 (ENSMPUG00000011890) #37 WASHC3 (ENSMPUG00000011893) Ursidae ANCESTRAL SPECIES 13 ENSGT00940000153110.B ENSGT00390000008645 ENSGT00390000009047.b ENSGT00940000156375 ENSGT00940000157129 #7 ENSGT00940000155834 #8 ENSGT00940000162970 #9 ENSGT00390000001561 #11 ENSGT00940000154098.a.d #12 ENSGT00390000008708.pb.b #13 ENSGT00500000045001 #14 ENSGT00940000157710 #15 ENSGT00940000154572.`c #17 ENSGT00940000163320 #18 ENSGT00600000084428.b #21 ENSGT00720000108833 #22 ENSGT00880000138031 #23 ENSGT00940000158187 #24 ENSGT00940000158037 #25 ENSGT00940000159389 #26 ENSGT00940000158600 #27 ENSGT00940000155166.A #28 ENSGT00390000016813 #30 ENSGT00940000155118.o #31 ENSGT00940000155067.a #32 ENSGT00940000158254 #33 ENSGT00950000183117.a.a #34 ENSGT00390000000062.x.a #35 ENSGT00390000006747 #36 ENSGT01030000234578.B.a #37 ENSGT00390000014084 Giant Panda MODERN SPECIES 6 AMDHD1 (ENSAMEG00000002115) HAL (ENSAMEG00000002098) LTA4H (ENSAMEG00000002029) ELK3 (ENSAMEG00000026087) #7 CDK17 (ENSAMEG00000001927) #8 ENSAMEG00000025825 CFAP54 (ENSAMEG00000024197) NEDD1 (ENSAMEG00000004999) #11 ENSAMEG00000010691 #12 SLC25A3 (ENSAMEG00000010735) #13 IKBIP (ENSAMEG00000010756) #14 APAF1 (ENSAMEG00000010759) #15 ENSAMEG00000010821 #17 GARIN6 (ENSAMEG00000029798) #18 BLTP3B (ENSAMEG00000001959) #21 ACTR6 (ENSAMEG00000015315) #22 SCYL2 (ENSAMEG00000015298) #23 SLC17A8 (ENSAMEG00000015266) #24 NR1H4 (ENSAMEG00000015232) #25 GAS2L3 (ENSAMEG00000015215) #26 ANO4 (ENSAMEG00000000600) #27 SLC5A8 (ENSAMEG00000016399) #28 UTP20 (ENSAMEG00000016416) #30 ARL1 (ENSAMEG00000016452) #31 SPIC (ENSAMEG00000028961) #32 MYBPC1 (ENSAMEG00000016466) #33 CHPT1 (ENSAMEG00000016549) #34 SYCP3 (ENSAMEG00000016551) #35 GNPTAB (ENSAMEG00000016554) #36 DRAM1 (ENSAMEG00000006305) #37 NUP37 (ENSAMEG00000006338) Ursus ANCESTRAL SPECIES 29 ENSGT00980000198967.a ENSGT00600000084428.b #21 ENSGT00720000108833 #22 ENSGT00880000138031 #23 ENSGT00940000158187 #24 ENSGT00940000158037 #25 ENSGT00940000159389 #26 ENSGT00940000158600 #27 ENSGT00940000155166.A #28 ENSGT00390000016813 #30 ENSGT00940000155118.o #31 ENSGT00940000155067.a #32 ENSGT00940000158254 #33 ENSGT00950000183117.a.a #34 ENSGT00390000000062.x.a #35 ENSGT00390000006747 #36 ENSGT01030000234578.B.a #37 ENSGT00390000014084 Polar bear MODERN SPECIES 280 ENSUMAG00000002145 #17 ENSUMAG00000002140 BLTP3B (ENSUMAG00000001697) #21 ACTR6 (ENSUMAG00000001633) #22 SCYL2 (ENSUMAG00000001610) #23 SLC17A8 (ENSUMAG00000001536) #24 NR1H4 (ENSUMAG00000001422) #25 GAS2L3 (ENSUMAG00000001346) #26 ANO4 (ENSUMAG00000001262) #27 SLC5A8 (ENSUMAG00000001198) #28 UTP20 (ENSUMAG00000000077) #30 ARL1 (ENSUMAG00000019547) #31 SPIC (ENSUMAG00000019543) #32 MYBPC1 (ENSUMAG00000019327) #33 CHPT1 (ENSUMAG00000019237) #34 SYCP3 (ENSUMAG00000019227) #35 GNPTAB (ENSUMAG00000019219) #36 DRAM1 (ENSUMAG00000019216) #37 WASHC3 (ENSUMAG00000019210) American black bear DUPLICATION American black bear MODERN SPECIES 7670 ENSUAMG00000003014 #22 American black bear MODERN SPECIES 8401 ENSUAMG00000005354 #22 Laurasiatheria_c ANCESTRAL SPECIES 5 ENSGT00940000153110.B ENSGT00390000008645 ENSGT00390000009047.b ENSGT00940000156375 ENSGT00940000157129 #7 ENSGT00940000155834 #8 ENSGT00940000162970 #9 ENSGT00940000162446 ENSGT00390000001561 #11 ENSGT00940000154098.a.d #12 ENSGT00390000008708 #13 ENSGT00500000045001 #14 ENSGT00940000157710 #15 ENSGT00940000154572.`c #17 ENSGT00600000084428.b #21 ENSGT00720000108833 #22 ENSGT00950000182976.a.a ENSGT00880000138031 #23 ENSGT00940000158187 #24 ENSGT00940000158037 #25 ENSGT00940000159389 #26 ENSGT00940000158600 #27 ENSGT00940000155166.A #28 ENSGT00390000016813 #30 ENSGT00940000155118.o #31 ENSGT00940000155067.a #32 ENSGT00940000158254 #33 ENSGT00950000183117.a.a #34 ENSGT00390000000062.x.a #35 ENSGT00390000006747 #36 ENSGT01030000234578.B.a #37 Chiroptera ANCESTRAL SPECIES 23 ENSGT00390000008645 ENSGT00390000009047.b ENSGT00940000156375 ENSGT00940000157129 #7 ENSGT00940000155834 #8 ENSGT00940000162970 #9 ENSGT00940000162446 ENSGT00390000001561 #11 ENSGT00940000154098.a.d #12 ENSGT00940000154098.a.c ##12 ENSGT00390000008708 #13 ENSGT00500000045001 #14 ENSGT00940000157710 #15 ENSGT00940000154572.`c #17 ENSGT00600000084428.b #21 ENSGT00720000108833 #22 ENSGT00950000182976.a.a ENSGT00880000138031 #23 ENSGT00940000158187 #24 ENSGT00940000158037 #25 ENSGT00940000159389 #26 ENSGT00940000158600 #27 ENSGT00940000155166.A #28 ENSGT00390000016813 #30 ENSGT00940000155118.o #31 ENSGT00940000155067.a #32 ENSGT00940000158254 #33 ENSGT00950000183117.a.a #34 ENSGT00390000000062.x.a #35 ENSGT00390000006747 #36 ENSGT01030000234578.B.a #37 Microchiroptera ANCESTRAL SPECIES 8 ENSGT00390000008645 ENSGT00390000009047.b ENSGT00940000156375 ENSGT00940000157129 #7 ENSGT00940000155834 #8 ENSGT00940000162970 #9 ENSGT00940000162446 ENSGT00390000001561 #11 ENSGT00940000154098.a.d #12 ENSGT00940000154098.a.c ##12 ENSGT00390000008708 #13 ENSGT00500000045001 #14 ENSGT00940000157710 #15 ENSGT00940000154572.`c #17 ENSGT00600000084428.b #21 ENSGT00720000108833 #22 ENSGT00950000182976.a.a ENSGT00880000138031 #23 ENSGT00940000158187 #24 ENSGT00940000158037 #25 ENSGT00940000159389 #26 ENSGT00940000158600 #27 ENSGT00940000155166.A #28 ENSGT00390000016813 #30 ENSGT00940000155118.o #31 ENSGT00940000155067.a #32 ENSGT00940000158254 #33 ENSGT00950000183117.a.a #34 ENSGT00390000000062.x.a #35 ENSGT00390000006747 #36 ENSGT01030000234578.B.a #37 Greater horseshoe bat MODERN SPECIES 1 HAL (ENSRFEG00010019753) LTA4H (ENSRFEG00010019582) ELK3 (ENSRFEG00010019517) #7 CDK17 (ENSRFEG00010019452) #8 CFAP54 (ENSRFEG00010018994) NEDD1 (ENSRFEG00010018827) #11 ENSRFEG00010018650 #12 ENSRFEG00010018608 #13 ENSRFEG00010018576 APAF1 (ENSRFEG00010018386) #15 ENSRFEG00010018331 ENSRFEG00010018324 ANKS1B (ENSRFEG00010017872) #17 ENSRFEG00010017816 BLTP3B (ENSRFEG00010017660) #21 ACTR6 (ENSRFEG00010017580) #22 SCYL2 (ENSRFEG00010017358) #23 SLC17A8 (ENSRFEG00010017004) #24 NR1H4 (ENSRFEG00010016901) #25 GAS2L3 (ENSRFEG00010016827) #26 ANO4 (ENSRFEG00010016021) #27 SLC5A8 (ENSRFEG00010015766) #28 UTP20 (ENSRFEG00010015715) #30 ARL1 (ENSRFEG00010015513) #31 ENSRFEG00010015420 #32 MYBPC1 (ENSRFEG00010013747) #33 CHPT1 (ENSRFEG00010013493) #34 SYCP3 (ENSRFEG00010013361) #35 GNPTAB (ENSRFEG00010013250) #36 DRAM1 (ENSRFEG00010013161) #37 WASHC3 (ENSRFEG00010013087) Microbat MODERN SPECIES 947 HAL (ENSMLUG00000013605) LTA4H (ENSMLUG00000013624) ELK3 (ENSMLUG00000002400) #7 ENSMLUG00000024585 CDK17 (ENSMLUG00000002405) #8 ENSMLUG00000002415 #9 ENSMLUG00000011945 NEDD1 (ENSMLUG00000001626) #11 TMPO (ENSMLUG00000000074) ##12 SLC25A3 (ENSMLUG00000008330) #13 ENSMLUG00000008339 #14 APAF1 (ENSMLUG00000008348) #15 ENSMLUG00000025382 #17 ENSMLUG00000008394 #17 ENSMLUG00000016072 #21 ACTR6 (ENSMLUG00000022723) #22 ENSMLUG00000009190 SCYL2 (ENSMLUG00000009220) #23 SLC17A8 (ENSMLUG00000009254) #24 NR1H4 (ENSMLUG00000009273) #25 GAS2L3 (ENSMLUG00000004905) #26 ANO4 (ENSMLUG00000013562) #27 SLC5A8 (ENSMLUG00000013581) #28 UTP20 (ENSMLUG00000002313) #30 ENSMLUG00000002351 #31 SPIC (ENSMLUG00000011052) #32 MYBPC1 (ENSMLUG00000010644) #33 CHPT1 (ENSMLUG00000010695) #34 SYCP3 (ENSMLUG00000010711) #35 GNPTAB (ENSMLUG00000000385) #36 DRAM1 (ENSMLUG00000000393) #37 Megabat MODERN SPECIES 2875 SLC25A3 (ENSPVAG00000005890) #13 IKBIP (ENSPVAG00000005891) #14 APAF1 (ENSPVAG00000005892) #15 ANKS1B (ENSPVAG00000005893) #17 ENSPVAG00000005894 BLTP3B (ENSPVAG00000005895) #21 ACTR6 (ENSPVAG00000005898) #22 ENSPVAG00000005901 Equus ANCESTRAL SPECIES 21 ENSGT00940000154818.a.a ENSGT00940000153110.B ENSGT00390000008645 ENSGT00390000009047.b ENSGT00940000156375 ENSGT00940000157129 #7 ENSGT00940000155834 #8 ENSGT00940000162446 ENSGT00390000001561 #11 ENSGT00940000154098.a.d #12 ENSGT00390000008708 #13 ENSGT00500000045001 #14 ENSGT00940000157710 #15 ENSGT00940000154572.`c #17 ENSGT00600000084428.b #21 ENSGT00720000108833 #22 ENSGT00950000182976.a.a ENSGT00880000138031 #23 ENSGT00940000158187 #24 ENSGT00940000158037 #25 ENSGT00940000159389 #26 ENSGT00940000158600 #27 ENSGT00940000155166.A #28 ENSGT00390000016813 #30 ENSGT00940000155118.o #31 ENSGT00940000155067.a.s #32 ENSGT00940000158254 #33 ENSGT00950000183117.a.a #34 ENSGT00390000000062.x.a #35 ENSGT00390000006747.j #36 ENSGT01030000234578.B.a #37 Horse MODERN SPECIES 20 AMDHD1 (ENSECAG00000024293) HAL (ENSECAG00000008161) LTA4H (ENSECAG00000008767) ENSECAG00000045733 ELK3 (ENSECAG00000017760) #7 CDK17 (ENSECAG00000021679) #8 CFAP54 (ENSECAG00000009697) NEDD1 (ENSECAG00000013725) #11 TMPO (ENSECAG00000023461) #12 IKBIP (ENSECAG00000024371) #14 SLC25A3 (ENSECAG00000056021) #13 APAF1 (ENSECAG00000024703) #15 ANKS1B (ENSECAG00000011449) #17 ENSECAG00000056139 BLTP3B (ENSECAG00000002701) #21 ACTR6 (ENSECAG00000017041) #22 DEPDC4 (ENSECAG00000019501) SCYL2 (ENSECAG00000022066) #23 SLC17A8 (ENSECAG00000013826) #24 NR1H4 (ENSECAG00000018166) #25 GAS2L3 (ENSECAG00000010371) #26 ANO4 (ENSECAG00000013480) #27 SLC5A8 (ENSECAG00000013230) #28 UTP20 (ENSECAG00000006876) #30 ARL1 (ENSECAG00000000372) #31 ENSECAG00000009614 #32 MYBPC1 (ENSECAG00000008625) #33 ENSECAG00000048628 CHPT1 (ENSECAG00000019000) #34 SYCP3 (ENSECAG00000023735) #35 GNPTAB (ENSECAG00000010682) #36 Donkey MODERN SPECIES 11 CCDC38 (ENSEASG00005019522) AMDHD1 (ENSEASG00005019523) HAL (ENSEASG00005019524) LTA4H (ENSEASG00005019525) ENSEASG00005019526 ELK3 (ENSEASG00005019530) #7 CDK17 (ENSEASG00005019532) #8 CFAP54 (ENSEASG00005019535) NEDD1 (ENSEASG00005019539) #11 ENSEASG00005019557 #12 SLC25A3 (ENSEASG00005019560) #13 IKBIP (ENSEASG00005019570) #14 APAF1 (ENSEASG00005019574) #15 ANKS1B (ENSEASG00005019623) #17 BLTP3B (ENSEASG00005019907) #21 ACTR6 (ENSEASG00005019911) #22 DEPDC4 (ENSEASG00005019914) SCYL2 (ENSEASG00005019917) #23 SLC17A8 (ENSEASG00005019921) #24 NR1H4 (ENSEASG00005019928) #25 GAS2L3 (ENSEASG00005033350) #26 ANO4 (ENSEASG00005019948) #27 SLC5A8 (ENSEASG00005019961) #28 UTP20 (ENSEASG00005019981) #30 ARL1 (ENSEASG00005020057) #31 SPIC (ENSEASG00005038574) #32 MYBPC1 (ENSEASG00005020089) #33 CHPT1 (ENSEASG00005020112) #34 SYCP3 (ENSEASG00005020115) #35 ENSEASG00005020118 #36 ENSEASG00005027099 #36 Artiodactyla ANCESTRAL SPECIES 6 ENSGT00390000009047.b ENSGT00940000156375 ENSGT00940000157129 #7 ENSGT00940000155834 #8 ENSGT00940000162970 #9 ENSGT01030000235320 #10 ENSGT00940000162446 ENSGT00390000001561 #11 ENSGT00940000154098.a.d #12 ENSGT00390000008708 #13 ENSGT00500000045001 #14 ENSGT00940000157710 #15 ENSGT00940000154572.`c #17 ENSGT00940000163320 #18 ENSGT00600000084428.b #21 ENSGT00720000108833 #22 ENSGT00950000182976.a.a ENSGT00880000138031 #23 ENSGT00940000158187 #24 ENSGT00940000158037 #25 ENSGT00940000159389 #26 ENSGT00940000158600 #27 ENSGT00940000155166.A #28 ENSGT00390000016813 #30 ENSGT00940000155118.o #31 ENSGT00940000155067.a #32 ENSGT00940000158254 #33 ENSGT00950000183117.a.a #34 ENSGT00390000000062.x.a #35 ENSGT00390000006747 #36 ENSGT01030000234578.B.a #37 Suina ANCESTRAL SPECIES 4 ENSGT00940000154818.a.a ENSGT00940000153110.B ENSGT00390000008645 ENSGT00390000009047.b ENSGT00940000156375 ENSGT00940000157129 #7 ENSGT00940000155834 #8 ENSGT00940000162446 ENSGT00390000001561 #11 ENSGT00940000154098.a.d #12 ENSGT00390000008708 #13 ENSGT00500000045001 #14 ENSGT00940000157710 #15 ENSGT00940000154572.`c #17 ENSGT00600000084428.b #21 ENSGT00720000108833 #22 ENSGT00880000138031 #23 ENSGT00940000158187 #24 ENSGT00940000158037 #25 ENSGT00940000159389 #26 ENSGT00940000158600 #27 ENSGT00940000155166.A #28 ENSGT00390000016813 #30 ENSGT00940000155118.o #31 ENSGT00940000155067.a #32 ENSGT00940000158254 #33 ENSGT00950000183117.a.a #34 ENSGT00390000000062.x.a #35 ENSGT00390000006747 #36 ENSGT01030000234578.B.a #37 ENSGT00390000014084 Pig MODERN SPECIES 13 ELK3 (ENSSSCG00000023803) #7 CDK17 (ENSSSCG00000028182) #8 ENSSSCG00000050899 CFAP54 (ENSSSCG00000033574) NEDD1 (ENSSSCG00000000890) #11 ENSSSCG00000036349 TMPO (ENSSSCG00000038487) #12 SLC25A3 (ENSSSCG00000000886) #13 IKBIP (ENSSSCG00000038772) #14 APAF1 (ENSSSCG00000000884) #15 ENSSSCG00000050703 ENSSSCG00000000883 ENSSSCG00000050712 ANKS1B (ENSSSCG00000022083) #17 BLTP3B (ENSSSCG00000026697) #21 ACTR6 (ENSSSCG00000025682) #22 SCYL2 (ENSSSCG00000000877) #23 SLC17A8 (ENSSSCG00000038946) #24 NR1H4 (ENSSSCG00000000875) #25 GAS2L3 (ENSSSCG00000000874) #26 ANO4 (ENSSSCG00000000873) #27 SLC5A8 (ENSSSCG00000000871) #28 ENSSSCG00000047368 UTP20 (ENSSSCG00000000869) #30 ARL1 (ENSSSCG00000000870) #31 SPIC (ENSSSCG00000000867) #32 ENSSSCG00000054653 MYBPC1 (ENSSSCG00000000866) #33 CHPT1 (ENSSSCG00000000864) #34 SYCP3 (ENSSSCG00000000863) #35 GNPTAB (ENSSSCG00000000862) #36 Chacoan peccary MODERN SPECIES 873 SNRPF (ENSCWAG00000017245) CCDC38 (ENSCWAG00000017292) AMDHD1 (ENSCWAG00000017397) HAL (ENSCWAG00000017480) LTA4H (ENSCWAG00000011298) ELK3 (ENSCWAG00000011586) #7 CDK17 (ENSCWAG00000011649) #8 CFAP54 (ENSCWAG00000011753) NEDD1 (ENSCWAG00000012318) #11 ENSCWAG00000012509 #12 SLC25A3 (ENSCWAG00000012689) #13 IKBIP (ENSCWAG00000012749) #14 APAF1 (ENSCWAG00000012901) #15 ANKS1B (ENSCWAG00000014719) #17 BLTP3B (ENSCWAG00000018723) #21 ACTR6 (ENSCWAG00000018845) #22 SCYL2 (ENSCWAG00000018942) #23 SLC17A8 (ENSCWAG00000019025) #24 NR1H4 (ENSCWAG00000019166) #25 ENSCWAG00000019350 #26 ENSCWAG00000019369 #26 ANO4 (ENSCWAG00000019430) #27 SLC5A8 (ENSCWAG00000019771) #28 UTP20 (ENSCWAG00000019835) #30 ARL1 (ENSCWAG00000019875) #31 SPIC (ENSCWAG00000019944) #32 MYBPC1 (ENSCWAG00000020041) #33 CHPT1 (ENSCWAG00000020929) #34 SYCP3 (ENSCWAG00000020953) #35 GNPTAB (ENSCWAG00000020989) #36 ENSCWAG00000021041 Artiodactyla_a ANCESTRAL SPECIES 5 ENSGT00390000009047.b ENSGT00940000156375 ENSGT00940000157129 #7 ENSGT00940000155834 #8 ENSGT00940000162970 #9 ENSGT01030000235320 #10 ENSGT00940000162446 ENSGT00390000001561 #11 ENSGT00940000154098.a.d #12 ENSGT00390000008708 #13 ENSGT00500000045001 #14 ENSGT00940000157710 #15 ENSGT00940000154572.`c #17 ENSGT00940000163320 #18 ENSGT00600000084428.b #21 ENSGT00720000108833 #22 ENSGT00950000182976.a.a ENSGT00880000138031 #23 ENSGT00940000158187 #24 ENSGT00940000158037 #25 ENSGT00940000159389 #26 ENSGT00940000158600 #27 ENSGT00940000155166.A #28 ENSGT00390000016813 #30 ENSGT00940000155118.o #31 ENSGT00940000155067.a #32 ENSGT00940000158254 #33 ENSGT00950000183117.a.a #34 ENSGT00390000000062.x.a #35 ENSGT00390000006747 #36 ENSGT01030000234578.B.a #37 Camelidae ANCESTRAL SPECIES 39 ENSGT00940000153110.B ENSGT00390000008645 ENSGT00390000009047.b ENSGT00940000156375 ENSGT00940000157129 #7 ENSGT00940000155834 #8 ENSGT00940000162970 #9 ENSGT00940000162446 ENSGT00390000001561 #11 ENSGT00940000154098.a.d #12 ENSGT00390000008708 #13 ENSGT00500000045001 #14 ENSGT00940000157710 #15 ENSGT00940000154572.`c #17 ENSGT00600000084428.b #21 ENSGT00720000108833 #22 ENSGT00950000182976.a.a ENSGT00880000138031 #23 ENSGT00940000158187 #24 ENSGT00940000158037 #25 ENSGT00940000159389 #26 ENSGT00940000158600 #27 ENSGT00940000155166.A #28 ENSGT00390000016813 #30 ENSGT00940000155118.o #31 ENSGT00940000155067.a #32 ENSGT00940000158254 #33 ENSGT00950000183117.a.a #34 ENSGT00390000000062.x.a #35 ENSGT00390000006747 #36 ENSGT01030000234578.B.a #37 Arabian camel MODERN SPECIES 3 CCDC38 (ENSCDRG00005019867) AMDHD1 (ENSCDRG00005019847) HAL (ENSCDRG00005019802) LTA4H (ENSCDRG00005019737) ELK3 (ENSCDRG00005019714) #7 CDK17 (ENSCDRG00005019682) #8 CFAP54 (ENSCDRG00005019532) NEDD1 (ENSCDRG00005019455) #11 ENSCDRG00005019355 #12 SLC25A3 (ENSCDRG00005019299) #13 IKBIP (ENSCDRG00005019237) #14 APAF1 (ENSCDRG00005018836) #15 ENSCDRG00005018765 ANKS1B (ENSCDRG00005017933) #17 BLTP3B (ENSCDRG00005017658) #21 ACTR6 (ENSCDRG00005017579) #22 ENSCDRG00005017531 SCYL2 (ENSCDRG00005017362) #23 SLC17A8 (ENSCDRG00005017191) #24 NR1H4 (ENSCDRG00005017007) #25 GAS2L3 (ENSCDRG00005016924) #26 ANO4 (ENSCDRG00005016441) #27 SLC5A8 (ENSCDRG00005016273) #28 UTP20 (ENSCDRG00005016150) #30 ARL1 (ENSCDRG00005015998) #31 ENSCDRG00005015976 SPIC (ENSCDRG00005015956) #32 MYBPC1 (ENSCDRG00005011702) #33 CHPT1 (ENSCDRG00005011388) #34 SYCP3 (ENSCDRG00005011273) #35 GNPTAB (ENSCDRG00005010913) #36 Alpaca MODERN SPECIES 3564 BLTP3B (ENSVPAG00000006055) #21 ACTR6 (ENSVPAG00000006058) #22 DEPDC4 (ENSVPAG00000006060) SCYL2 (ENSVPAG00000006062) #23 SLC17A8 (ENSVPAG00000006064) #24 NR1H4 (ENSVPAG00000006065) #25 GAS2L3 (ENSVPAG00000006066) #26 Artiodactyla_b ANCESTRAL SPECIES 5 ENSGT00390000009047.b ENSGT00940000156375 ENSGT00940000157129 #7 ENSGT00940000155834 #8 ENSGT00940000162970 #9 ENSGT01030000235320 #10 ENSGT00940000162446 ENSGT00390000001561 #11 ENSGT00940000154098.a.d #12 ENSGT00390000008708 #13 ENSGT00500000045001 #14 ENSGT00940000157710 #15 ENSGT00940000154572.`c #17 ENSGT00940000163320 #18 ENSGT00600000084428.b #21 ENSGT00720000108833 #22 ENSGT00950000182976.a.a ENSGT00880000138031 #23 ENSGT00940000158187 #24 ENSGT00940000158037 #25 ENSGT00940000159389 #26 ENSGT00940000158600 #27 ENSGT00940000155166.A #28 ENSGT00390000016813 #30 ENSGT00940000155118.o #31 ENSGT00940000155067.a #32 ENSGT00940000158254 #33 ENSGT00950000183117.a.a #34 ENSGT00390000000062.x.a #35 ENSGT00390000006747 #36 ENSGT01030000234578.B.a #37 Cetacea ANCESTRAL SPECIES 8 ENSGT00390000009047.b ENSGT00940000156375 ENSGT00940000157129 #7 ENSGT00940000155834 #8 ENSGT00940000162970 #9 ENSGT00940000162446 ENSGT00390000001561 #11 ENSGT00390000003526.b ENSGT00940000154098.a.d #12 ENSGT00390000008708 #13 ENSGT00500000045001 #14 ENSGT00940000157710 #15 ENSGT00940000154572.`c #17 ENSGT00940000163320 #18 ENSGT00600000084428.b #21 ENSGT00720000108833 #22 ENSGT00950000182976.a.a ENSGT00880000138031 #23 ENSGT00940000158187 #24 ENSGT00940000158037 #25 ENSGT00940000159389 #26 ENSGT00940000158600 #27 ENSGT00940000155166.A #28 ENSGT00390000016813 #30 ENSGT00900000143486 ENSGT00940000158254 #33 ENSGT00950000183117.a.a #34 ENSGT00390000000062.x.a #35 ENSGT00390000006747 #36 ENSGT01030000234578.B.a #37 ENSGT00390000014084 Odontoceti ANCESTRAL SPECIES 7 ENSGT00390000009047.b ENSGT00940000156375 ENSGT00940000157129 #7 ENSGT00940000155834 #8 ENSGT00940000162970 #9 ENSGT00940000162446 ENSGT00390000001561 #11 ENSGT00390000003526.b ENSGT00940000154098.a.d #12 ENSGT00390000008708 #13 ENSGT00500000045001 #14 ENSGT00940000157710 #15 ENSGT00940000154572.`c #17 ENSGT00940000163320 #18 ENSGT00600000084428.b #21 ENSGT00720000108833 #22 ENSGT00950000182976.a.a ENSGT00880000138031 #23 ENSGT00940000158187 #24 ENSGT00940000158037 #25 ENSGT00940000159389 #26 ENSGT00940000158600 #27 ENSGT00940000155166.A #28 ENSGT00390000016813 #30 ENSGT00940000155118.o.b #31 ENSGT00940000155067.a #32 ENSGT00940000158254 #33 ENSGT00950000183117.a.a #34 ENSGT00390000000062.x.a #35 ENSGT00390000006747 #36 ENSGT01030000234578.B.a #37 Odontoceti_a ANCESTRAL SPECIES 6 ENSGT00390000009047.b ENSGT00940000156375 ENSGT00940000157129 #7 ENSGT00940000155834 #8 ENSGT00940000162970 #9 ENSGT00940000162446 ENSGT00390000001561 #11 ENSGT00940000154098.a.d #12 ENSGT00940000154098.a.c ##12 ENSGT00390000008708 #13 ENSGT00500000045001 #14 ENSGT00940000157710 #15 ENSGT00940000154572.`c #17 ENSGT00940000163320 #18 ENSGT00600000084428.b #21 ENSGT00720000108833 #22 ENSGT00880000138031 #23 ENSGT00940000158187 #24 ENSGT00940000158037 #25 ENSGT00940000159389 #26 ENSGT00940000158600 #27 ENSGT00940000155166.A #28 ENSGT00390000016813 #30 ENSGT00940000155118.o.b #31 ENSGT00940000155067.a #32 ENSGT00940000158254 #33 ENSGT00950000183117.a.a #34 ENSGT00390000000062.x.a #35 ENSGT00390000006747 #36 ENSGT01030000234578.B.a #37 ENSGT00390000014084.ab.a Dolphin MODERN SPECIES 67 ENSTTRG00000004734 #12 SLC25A3 (ENSTTRG00000004739) #13 IKBIP (ENSTTRG00000004745) #14 APAF1 (ENSTTRG00000004751) #15 ANKS1B (ENSTTRG00000004777) #17 GARIN6 (ENSTTRG00000004790) #18 BLTP3B (ENSTTRG00000004793) #21 ACTR6 (ENSTTRG00000004802) #22 Odontoceti_b ANCESTRAL SPECIES 7 ENSGT00390000008645 ENSGT00390000009047.b ENSGT00940000156375 ENSGT00940000157129 #7 ENSGT00940000155834 #8 ENSGT00940000162446 ENSGT00390000001561 #11 ENSGT00940000154098.a.d #12 ENSGT00390000008708 #13 ENSGT00500000045001 #14 ENSGT00940000157710 #15 ENSGT00940000154572.`c #17 ENSGT00940000163320 #18 ENSGT01060000248806.a.a ENSGT00600000084428.b #21 ENSGT00720000108833 #22 ENSGT00880000138031 #23 ENSGT00940000158187 #24 ENSGT00940000158037 #25 ENSGT00940000159389 #26 ENSGT00940000158600 #27 ENSGT00940000155166.A #28 ENSGT00390000016813 #30 ENSGT00940000155118.o.b #31 ENSGT00940000155067.a #32 ENSGT00940000158254 #33 ENSGT00950000183117.a.a #34 ENSGT00390000000062.x.a #35 ENSGT00390000006747 #36 ENSGT01030000234578.B.a #37 ENSGT00390000014084.`b Monodontidae ANCESTRAL SPECIES 6 ENSGT00390000009047.b ENSGT00940000156375 ENSGT00940000157129 #7 ENSGT00940000155834 #8 ENSGT00940000162446 ENSGT00390000001561 #11 ENSGT00940000154098.a.d #12 ENSGT00940000154098.a.c ##12 ENSGT00390000008708 #13 ENSGT00500000045001 #14 ENSGT00940000157710 #15 ENSGT00940000154572.`c #17 ENSGT00940000163320 #18 ENSGT01060000248806.a.a ENSGT00600000084428.b #21 ENSGT00720000108833 #22 ENSGT00880000138031 #23 ENSGT00940000158187 #24 ENSGT00940000158037 #25 ENSGT00940000159389 #26 ENSGT00940000158600 #27 ENSGT00940000155166.A #28 ENSGT00390000016813 #30 ENSGT00940000155118.o.a.b #31 ENSGT00940000155067.a #32 ENSGT00940000158254 #33 ENSGT00950000183117.a.a #34 ENSGT00390000000062.x.a #35 ENSGT00390000006747 #36 ENSGT01030000234578.B.a #37 ENSGT00390000014084.ab.a Beluga whale MODERN SPECIES 45 ELK3 (ENSDLEG00000011295) #7 CDK17 (ENSDLEG00000011309) #8 CFAP54 (ENSDLEG00000011364) NEDD1 (ENSDLEG00000011471) #11 TMPO (ENSDLEG00000011539) ##12 SLC25A3 (ENSDLEG00000011582) #13 IKBIP (ENSDLEG00000011613) #14 APAF1 (ENSDLEG00000011640) #15 ENSDLEG00000011766 ##17 ENSDLEG00000011773 ##17 ENSDLEG00000011784 ENSDLEG00000011790 #17 GARIN6 (ENSDLEG00000011803) #18 ENSDLEG00000011815 BLTP3B (ENSDLEG00000011825) #21 ACTR6 (ENSDLEG00000011851) #22 SCYL2 (ENSDLEG00000011872) #23 SLC17A8 (ENSDLEG00000011936) #24 NR1H4 (ENSDLEG00000011975) #25 GAS2L3 (ENSDLEG00000012028) #26 ANO4 (ENSDLEG00000012044) #27 SLC5A8 (ENSDLEG00000012140) #28 UTP20 (ENSDLEG00000012184) #30 ENSDLEG00000012234 #31 SPIC (ENSDLEG00000012245) #32 MYBPC1 (ENSDLEG00000012290) #33 CHPT1 (ENSDLEG00000012562) #34 SYCP3 (ENSDLEG00000012574) #35 GNPTAB (ENSDLEG00000012595) #36 ENSDLEG00000012682 #37 ENSDLEG00000012694 Narwhal MODERN SPECIES 313 HAL (ENSMMNG00015013379) LTA4H (ENSMMNG00015013417) ELK3 (ENSMMNG00015013477) #7 CDK17 (ENSMMNG00015013496) #8 CFAP54 (ENSMMNG00015013547) NEDD1 (ENSMMNG00015013645) #11 ENSMMNG00015013740 #12 SLC25A3 (ENSMMNG00015013779) #13 IKBIP (ENSMMNG00015013856) #14 APAF1 (ENSMMNG00015013879) #15 ANKS1B (ENSMMNG00015014074) #17 ENSMMNG00015014315 GARIN6 (ENSMMNG00015014319) #18 ENSMMNG00015014334 BLTP3B (ENSMMNG00015014349) #21 ACTR6 (ENSMMNG00015014364) #22 SCYL2 (ENSMMNG00015014414) #23 SLC17A8 (ENSMMNG00015014449) #24 NR1H4 (ENSMMNG00015014507) #25 GAS2L3 (ENSMMNG00015014544) #26 ANO4 (ENSMMNG00015014593) #27 SLC5A8 (ENSMMNG00015014687) #28 UTP20 (ENSMMNG00015014730) #30 ENSMMNG00015014764 SPIC (ENSMMNG00015014772) #32 MYBPC1 (ENSMMNG00015014938) #33 CHPT1 (ENSMMNG00015015187) #34 SYCP3 (ENSMMNG00015015206) #35 GNPTAB (ENSMMNG00015015244) #36 DRAM1 (ENSMMNG00015015327) #37 ENSMMNG00015015348 Vaquita MODERN SPECIES 1 LTA4H (ENSPSNG00000012687) ELK3 (ENSPSNG00000012591) #7 CDK17 (ENSPSNG00000012485) #8 ENSPSNG00000012324 #9 NEDD1 (ENSPSNG00000012119) #11 ENSPSNG00000011873 #12 SLC25A3 (ENSPSNG00000011667) #13 IKBIP (ENSPSNG00000011556) #14 APAF1 (ENSPSNG00000011279) #15 ENSPSNG00000011235 ENSPSNG00000011179 GARIN6 (ENSPSNG00000011143) #18 ENSPSNG00000011090 ANKS1B (ENSPSNG00000009944) #17 BLTP3B (ENSPSNG00000009410) #21 ACTR6 (ENSPSNG00000009262) #22 SCYL2 (ENSPSNG00000009144) #23 SLC17A8 (ENSPSNG00000008979) #24 NR1H4 (ENSPSNG00000008748) #25 GAS2L3 (ENSPSNG00000008665) #26 ANO4 (ENSPSNG00000008341) #27 SLC5A8 (ENSPSNG00000008157) #28 UTP20 (ENSPSNG00000008109) #30 ARL1 (ENSPSNG00000008015) #31 SPIC (ENSPSNG00000007910) #32 MYBPC1 (ENSPSNG00000006793) #33 CHPT1 (ENSPSNG00000006536) #34 SYCP3 (ENSPSNG00000006499) #35 GNPTAB (ENSPSNG00000006375) #36 DRAM1 (ENSPSNG00000006230) #37 WASHC3 (ENSPSNG00000006187) Sperm whale MODERN SPECIES 17 CCDC38 (ENSPCTG00005005736) AMDHD1 (ENSPCTG00005005792) HAL (ENSPCTG00005005851) LTA4H (ENSPCTG00005006181) ELK3 (ENSPCTG00005006435) #7 CDK17 (ENSPCTG00005006524) #8 ENSPCTG00005006592 #9 NEDD1 (ENSPCTG00005006658) #11 ENSPCTG00005006737 TMPO (ENSPCTG00005006842) #12 SLC25A3 (ENSPCTG00005007003) #13 IKBIP (ENSPCTG00005007080) #14 APAF1 (ENSPCTG00005007208) #15 ANKS1B (ENSPCTG00005007818) #17 BLTP3B (ENSPCTG00005010599) #21 ACTR6 (ENSPCTG00005010801) #22 DEPDC4 (ENSPCTG00005010961) SCYL2 (ENSPCTG00005011005) #23 SLC17A8 (ENSPCTG00005011129) #24 NR1H4 (ENSPCTG00005011367) #25 GAS2L3 (ENSPCTG00005011766) #26 ANO4 (ENSPCTG00005011868) #27 SLC5A8 (ENSPCTG00005012208) #28 UTP20 (ENSPCTG00005012384) #30 ARL1 (ENSPCTG00005012979) #31 SPIC (ENSPCTG00005013283) #32 ENSPCTG00005013365 MYBPC1 (ENSPCTG00005013500) #33 CHPT1 (ENSPCTG00005015686) #34 SYCP3 (ENSPCTG00005015907) #35 GNPTAB (ENSPCTG00005016010) #36 Blue whale MODERN SPECIES 1 AMDHD1 (ENSBMSG00010009480) HAL (ENSBMSG00010009502) LTA4H (ENSBMSG00010009606) ELK3 (ENSBMSG00010009646) #7 CDK17 (ENSBMSG00010009667) #8 ENSBMSG00010009687 #9 NEDD1 (ENSBMSG00010009710) #11 ENSBMSG00010009758 ENSBMSG00010009790 #12 ENSBMSG00010009830 #13 IKBIP (ENSBMSG00010009856) #14 APAF1 (ENSBMSG00010009889) #15 ANKS1B (ENSBMSG00010010048) ##17 ENSBMSG00010010902 BLTP3B (ENSBMSG00010006007) #21 ACTR6 (ENSBMSG00010006031) #22 SCYL2 (ENSBMSG00010006075) #23 SLC17A8 (ENSBMSG00010006142) #24 NR1H4 (ENSBMSG00010006205) #25 GAS2L3 (ENSBMSG00010006259) #26 ANO4 (ENSBMSG00010006300) #27 SLC5A8 (ENSBMSG00010006402) #28 UTP20 (ENSBMSG00010006434) #30 ENSBMSG00010006485 #31 ENSBMSG00010006520 #32 MYBPC1 (ENSBMSG00010006609) #33 CHPT1 (ENSBMSG00010006840) #34 SYCP3 (ENSBMSG00010006857) #35 GNPTAB (ENSBMSG00010006890) #36 ENSBMSG00010006977 #37 ENSBMSG00010007004 Pecora ANCESTRAL SPECIES 3 ENSGT00390000008645 ENSGT00390000009047.b ENSGT00940000156375 ENSGT00940000157129 #7 ENSGT00940000155834 #8 ENSGT00940000162970 #9 ENSGT01030000235320 #10 ENSGT00940000162446 ENSGT00390000001561 #11 ENSGT00940000154098.a.d #12 ENSGT00390000008708 #13 ENSGT00500000045001 #14 ENSGT00940000157710 #15 ENSGT00940000154572.`c #17 ENSGT00600000084428.b #21 ENSGT00720000108833 #22 ENSGT00880000138031 #23 ENSGT00940000158187 #24 ENSGT00940000158037 #25 ENSGT00940000159389 #26 ENSGT00940000158600 #27 ENSGT00940000155166.A #28 ENSGT00390000016813 #30 ENSGT00940000155118.o #31 ENSGT00940000155067.a #32 ENSGT00940000158254 #33 ENSGT00950000183117.a.a #34 ENSGT00390000000062.x.a #35 ENSGT00390000006747 #36 ENSGT01030000234578.B.a #37 ENSGT00390000014084.z Yarkand deer MODERN SPECIES 14 LTA4H (ENSCHYG00000017296) ELK3 (ENSCHYG00000017527) #7 CDK17 (ENSCHYG00000017640) #8 ENSCHYG00000018145 CFAP54 (ENSCHYG00000018187) NEDD1 (ENSCHYG00000018895) #11 ENSCHYG00000019199 ENSCHYG00000019270 #12 ENSCHYG00000019480 #13 ENSCHYG00000019744 IKBIP (ENSCHYG00000019783) #14 APAF1 (ENSCHYG00000019906) #15 ANKS1B (ENSCHYG00000020900) #17 ENSCHYG00000022096 BLTP3B (ENSCHYG00000022150) #21 ACTR6 (ENSCHYG00000022511) #22 SCYL2 (ENSCHYG00000022642) #23 SLC17A8 (ENSCHYG00000023010) #24 NR1H4 (ENSCHYG00000023219) #25 GAS2L3 (ENSCHYG00000023599) #26 ANO4 (ENSCHYG00000023758) #27 SLC5A8 (ENSCHYG00000024213) #28 UTP20 (ENSCHYG00000024333) #30 ARL1 (ENSCHYG00000024652) #31 SPIC (ENSCHYG00000024724) #32 MYBPC1 (ENSCHYG00000024823) #33 CHPT1 (ENSCHYG00000025883) #34 SYCP3 (ENSCHYG00000025959) #35 GNPTAB (ENSCHYG00000026007) #36 DRAM1 (ENSCHYG00000026106) #37 ENSCHYG00000026143 Percora_a ANCESTRAL SPECIES 3 ENSGT00390000008645 ENSGT00390000009047.b ENSGT00940000156375 ENSGT00940000157129 #7 ENSGT00940000155834 #8 ENSGT00940000162970 #9 ENSGT01030000235320 #10 ENSGT00940000162446 ENSGT00390000001561 #11 ENSGT00940000154098.a.d #12 ENSGT00390000008708 #13 ENSGT00500000045001 #14 ENSGT00940000157710 #15 ENSGT00940000154572.`c #17 ENSGT00600000084428.b #21 ENSGT00720000108833 #22 ENSGT00880000138031 #23 ENSGT00940000158187 #24 ENSGT00940000158037 #25 ENSGT00940000159389 #26 ENSGT00940000158600 #27 ENSGT00940000155166.A #28 ENSGT00390000016813 #30 ENSGT00940000155118.o #31 ENSGT00940000155067.a #32 ENSGT00940000158254 #33 ENSGT00950000183117.a.a #34 ENSGT00390000000062.x.a #35 ENSGT00390000006747 #36 ENSGT01030000234578.B.a #37 ENSGT00390000014084.z Siberian musk deer MODERN SPECIES 1256 AMDHD1 (ENSMMSG00000024178) HAL (ENSMMSG00000024168) LTA4H (ENSMMSG00000024150) ELK3 (ENSMMSG00000024140) #7 CDK17 (ENSMMSG00000024131) #8 ENSMMSG00000024127 #9 ENSMMSG00000024121 #10 NEDD1 (ENSMMSG00000024112) #11 ENSMMSG00000024096 #12 SLC25A3 (ENSMMSG00000024085) #13 ENSMMSG00000024079 #14 APAF1 (ENSMMSG00000024050) #15 ENSMMSG00000024040 ANKS1B (ENSMMSG00000023670) #17 BLTP3B (ENSMMSG00000023582) #21 ACTR6 (ENSMMSG00000023566) #22 SCYL2 (ENSMMSG00000023538) #23 SLC17A8 (ENSMMSG00000023518) #24 NR1H4 (ENSMMSG00000023473) #25 GAS2L3 (ENSMMSG00000023454) #26 ANO4 (ENSMMSG00000023384) #27 SLC5A8 (ENSMMSG00000023355) #28 UTP20 (ENSMMSG00000023336) #30 ENSMMSG00000023322 #31 SPIC (ENSMMSG00000023308) #32 MYBPC1 (ENSMMSG00000022857) #33 CHPT1 (ENSMMSG00000022713) #34 SYCP3 (ENSMMSG00000022696) #35 GNPTAB (ENSMMSG00000022661) #36 DRAM1 (ENSMMSG00000022616) #37 ENSMMSG00000022596 Bovidae ANCESTRAL SPECIES 3 ENSGT00940000156375 ENSGT00940000157129 #7 ENSGT00940000155834 #8 ENSGT00940000162970 #9 ENSGT01030000235320 #10 ENSGT00940000162446 ENSGT00390000001561 #11 ENSGT00940000154098.a.d #12 ENSGT00390000008708 #13 ENSGT00500000045001 #14 ENSGT00940000157710 #15 ENSGT00940000154572.`c #17 ENSGT00940000163320 #18 ENSGT00940000170157 ENSGT00600000084428.b #21 ENSGT00720000108833 #22 ENSGT00880000138031 #23 ENSGT00940000158187 #24 ENSGT00940000158037 #25 ENSGT00940000159389 #26 ENSGT00940000158600 #27 ENSGT00940000155166.A #28 ENSGT00390000016813 #30 ENSGT00940000155118.o #31 ENSGT00940000155067.a #32 ENSGT00940000158254 #33 ENSGT00950000183117.a.a #34 ENSGT00390000000062.x.a #35 ENSGT00390000006747 #36 ENSGT01030000234578.B.a #37 ENSGT00390000014084.z Caprinae ANCESTRAL SPECIES ENSGT00940000156375 ENSGT00940000157129 #7 ENSGT00940000155834 #8 ENSGT00940000162446 ENSGT00390000001561 #11 ENSGT00940000154098.a.d #12 ENSGT00390000008708 #13 ENSGT00500000045001 #14 ENSGT00390000003710.c.a.b.a.b.h ENSGT00940000157710 #15 ENSGT00940000161899.q.a ENSGT00940000154572.`c #17 ENSGT00940000163320 #18 ENSGT00940000170157 ENSGT00600000084428.b #21 ENSGT00720000108833 #22 ENSGT00880000138031 #23 ENSGT00940000158187 #24 ENSGT00940000158037 #25 ENSGT00940000159389 #26 ENSGT00940000158600 #27 ENSGT00940000155166.A #28 ENSGT00390000016813 #30 ENSGT00940000155118.o #31 ENSGT00940000155067.a #32 ENSGT00940000158254 #33 ENSGT00950000183117.a.a #34 ENSGT00390000000062.x.a #35 ENSGT00390000006747 #36 ENSGT01030000234578.B.a #37 ENSGT00390000014084.z Goat MODERN SPECIES 24 ENSCHIG00000007303 ENSCHIG00000011297 #12 SLC25A3 (ENSCHIG00000026853) #13 IKBIP (ENSCHIG00000018224) #14 ENSCHIG00000009665 APAF1 (ENSCHIG00000026050) #15 ENSCHIG00000026522 ENSCHIG00000021672 #17 ENSCHIG00000011860 ENSCHIG00000011894 ENSCHIG00000011002 #17 GARIN6 (ENSCHIG00000026281) #18 ENSCHIG00000020715 #17 ENSCHIG00000014307 BLTP3B (ENSCHIG00000002074) #21 ACTR6 (ENSCHIG00000026128) #22 SCYL2 (ENSCHIG00000022321) #23 SLC17A8 (ENSCHIG00000016996) #24 NR1H4 (ENSCHIG00000020981) #25 GAS2L3 (ENSCHIG00000015539) #26 ANO4 (ENSCHIG00000011611) #27 SLC5A8 (ENSCHIG00000012962) #28 UTP20 (ENSCHIG00000009221) #30 ARL1 (ENSCHIG00000024524) #31 ENSCHIG00000007713 ENSCHIG00000026862 #32 MYBPC1 (ENSCHIG00000026869) #33 CHPT1 (ENSCHIG00000009936) #34 SYCP3 (ENSCHIG00000026071) #35 GNPTAB (ENSCHIG00000024196) #36 DRAM1 (ENSCHIG00000019601) #37 Rambouillet Sheep MODERN SPECIES 19 ENSOARG00020011279 #12 SLC25A3 (ENSOARG00020011479) #13 IKBIP (ENSOARG00020011666) #14 ENSOARG00020011775 APAF1 (ENSOARG00020011843) #15 ENSOARG00020012977 ENSOARG00020013011 #17 ENSOARG00020013132 ENSOARG00020013188 ENSOARG00020013303 ENSOARG00020013344 ENSOARG00020013408 #17 ENSOARG00020013498 BLTP3B (ENSOARG00020013541) #21 ENSOARG00020013878 ACTR6 (ENSOARG00020013903) #22 SCYL2 (ENSOARG00020014106) #23 ENSOARG00020014449 SLC17A8 (ENSOARG00020005092) #24 NR1H4 (ENSOARG00020005198) #25 ENSOARG00020005299 #26 ANO4 (ENSOARG00020005350) #27 SLC5A8 (ENSOARG00020005486) #28 UTP20 (ENSOARG00020005594) #30 ARL1 (ENSOARG00020006041) #31 SPIC (ENSOARG00020006153) #32 MYBPC1 (ENSOARG00020006228) #33 SYCP3 (ENSOARG00020008561) #35 GNPTAB (ENSOARG00020008629) #36 DRAM1 (ENSOARG00020009316) #37 WASHC3 (ENSOARG00020009382) Bovinae ANCESTRAL SPECIES 10 ENSGT00390000009047.b ENSGT00940000156375 ENSGT00940000157129 #7 ENSGT00940000155834 #8 ENSGT00940000162970 #9 ENSGT01030000235320 #10 ENSGT00940000162446 ENSGT00390000001561 #11 ENSGT00940000154098.a.d #12 ENSGT00390000008708 #13 ENSGT00500000045001 #14 ENSGT00940000157710 #15 ENSGT00940000154572.`c #17 ENSGT00940000170157 ENSGT00600000084428.b #21 ENSGT00720000108833 #22 ENSGT00880000138031 #23 ENSGT00940000158187 #24 ENSGT00940000158037 #25 ENSGT00940000159389 #26 ENSGT00940000158600 #27 ENSGT00940000155166.A #28 ENSGT00390000016813 #30 ENSGT00940000155118.o #31 ENSGT00940000154612.m.a.c ENSGT00940000155067.a #32 ENSGT00940000158254 #33 ENSGT00950000183117.a.a #34 ENSGT00390000000062.x.a #35 ENSGT00390000006747 #36 ENSGT01030000234578.B.a #37 Bos ANCESTRAL SPECIES 2 ENSGT00940000156375 ENSGT00940000157129 #7 ENSGT00940000155834 #8 ENSGT00940000162970 #9 ENSGT01030000235320 #10 ENSGT00940000162446 ENSGT00390000001561 #11 ENSGT00940000154098.a.d #12 ENSGT00390000008708 #13 ENSGT00500000045001 #14 ENSGT00940000157710 #15 ENSGT01100000263480.a.a.b.b.b.a.a.a.a.a.b.a.a.b.b.a.a.a.b.b.b.b ENSGT00940000154572.`c #17 ENSGT00940000170157 ENSGT00600000084428.b #21 ENSGT00720000108833 #22 ENSGT00880000138031 #23 ENSGT00940000158187 #24 ENSGT00940000158037 #25 ENSGT00940000159389 #26 ENSGT00940000158600.d #27 ENSGT00940000155166.A #28 ENSGT00390000016813 #30 ENSGT00940000155118.o #31 ENSGT00940000154612.m.a.c ENSGT00940000155067.a #32 ENSGT00940000158254 #33 ENSGT00950000183117.a.a #34 ENSGT00390000000062.x.a #35 ENSGT00390000006747 #36 ENSGT01030000234578.B.a #37 Bos_a ANCESTRAL SPECIES 3 ENSGT00390000009047.b ENSGT00940000156375 ENSGT00940000157129 #7 ENSGT00940000155834 #8 ENSGT00940000162446 ENSGT00390000001561 #11 ENSGT00940000154098.a.d #12 ENSGT01100000263480.a.a.a.a.b.a.a.a.a.a.a.b ENSGT01100000263506.a.e.a.a.a.a.a.d.a.b ENSGT00390000008708 #13 ENSGT00500000045001 #14 ENSGT00940000157710 #15 ENSGT01100000263480.a.a.b.b.b.a.a.a.a.a.b.a.a.b.b.a.a.a.b.b.b.b ENSGT00940000154572.`c #17 ENSGT00600000084428.b #21 ENSGT00720000108833 #22 ENSGT00880000138031 #23 ENSGT00940000158187 #24 ENSGT00940000158037 #25 ENSGT00940000159389 #26 ENSGT00940000158600.d #27 ENSGT00940000155166.A #28 ENSGT00390000016813 #30 ENSGT00940000155118.o #31 ENSGT00940000154612.m.a.c ENSGT00940000155067.a #32 ENSGT00940000158254 #33 ENSGT00950000183117.a.a #34 ENSGT00390000000062.x.a #35 ENSGT00390000006747 #36 ENSGT01030000234578.B.a #37 Domestic yak DUPLICATION Domestic yak MODERN SPECIES 24 LTA4H (ENSBGRG00000006246) ELK3 (ENSBGRG00000006178) #7 CDK17 (ENSBGRG00000005998) #8 CFAP54 (ENSBGRG00000005654) NEDD1 (ENSBGRG00000005492) #11 ENSBGRG00000005471 ENSBGRG00000005452 ENSBGRG00000005328 #12 ENSBGRG00000005289 SLC25A3 (ENSBGRG00000005230) #13 IKBIP (ENSBGRG00000005194) #14 APAF1 (ENSBGRG00000004769) #15 ENSBGRG00000004690 ANKS1B (ENSBGRG00000003686) #17 BLTP3B (ENSBGRG00000003515) #21 ENSBGRG00000003369 #22 SCYL2 (ENSBGRG00000003248) #23 SLC17A8 (ENSBGRG00000003178) #24 ENSBGRG00000003155 NR1H4 (ENSBGRG00000003123) #25 GAS2L3 (ENSBGRG00000003088) #26 ANO4 (ENSBGRG00000002904) #27 SLC5A8 (ENSBGRG00000002819) #28 UTP20 (ENSBGRG00000002781) #30 ARL1 (ENSBGRG00000002671) #31 ENSBGRG00000002653 ENSBGRG00000002632 #32 MYBPC1 (ENSBGRG00000001036) #33 CHPT1 (ENSBGRG00000000795) #34 SYCP3 (ENSBGRG00000000767) #35 GNPTAB (ENSBGRG00000000629) #36 Domestic yak MODERN SPECIES 19 PPIF (ENSBGRG00000026020) ZCCHC24 (ENSBGRG00000026029) ANXA11 (ENSBGRG00000026044) ENSBGRG00000026065 ENSBGRG00000026078 ENSBGRG00000026101 ENSBGRG00000026148 ENSBGRG00000026156 MAT1A (ENSBGRG00000026171) DYDC1 (ENSBGRG00000026188) DYDC2 (ENSBGRG00000026194) PRXL2A (ENSBGRG00000026197) TSPAN14 (ENSBGRG00000026210) SH2D4B (ENSBGRG00000026255) NRG3 (ENSBGRG00000026267) ENSBGRG00000026297 #22 ENSBGRG00000026300 GHITM (ENSBGRG00000026306) ENSBGRG00000026318 CDHR1 (ENSBGRG00000026334) LRIT2 (ENSBGRG00000026359) LRIT1 (ENSBGRG00000026365) RGR (ENSBGRG00000026377) CCSER2 (ENSBGRG00000026406) ENSBGRG00000026437 GRID1 (ENSBGRG00000026440) WAPL (ENSBGRG00000026454) OPN4 (ENSBGRG00000026480) LDB3 (ENSBGRG00000026515) ENSBGRG00000026555 BMPR1A (ENSBGRG00000026562) Wild yak DUPLICATION Wild yak MODERN SPECIES 254 ANKS1B (ENSBMUG00000024131) #17 ENSBMUG00000024142 BLTP3B (ENSBMUG00000024161) #21 ENSBMUG00000024199 #22 SCYL2 (ENSBMUG00000024260) #23 SLC17A8 (ENSBMUG00000024293) #24 NR1H4 (ENSBMUG00000024339) #25 ENSBMUG00000024355 #26 ENSBMUG00000024358 #26 ENSBMUG00000024366 Wild yak MODERN SPECIES 1437 ENSBMUG00000025384 ENSBMUG00000025385 #22 GHITM (ENSBMUG00000025395) GPR15LG (ENSBMUG00000025399) CDHR1 (ENSBMUG00000025410) LRIT2 (ENSBMUG00000025420) LRIT1 (ENSBMUG00000025423) RGR (ENSBMUG00000025427) ENSBMUG00000025446 Bos_b ANCESTRAL SPECIES 22 ENSGT00940000155834 #8 ENSGT00940000162970 #9 ENSGT01030000235320 #10 ENSGT00940000162446 ENSGT01100000263480.a.a.a.a.b.a.a.a.a.a.a.b ENSGT01100000263506.a.e.a.a.a.a.a.d.a.b ENSGT00390000001561 #11 ENSGT00940000154098.a.d #12 ENSGT00390000008708 #13 ENSGT00500000045001 #14 ENSGT00940000157710 #15 ENSGT01100000263480.a.a.b.b.b.a.a.a.a.a.b.a.a.b.b.a.a.a.b.b.b.b ENSGT00940000154572.`c #17 ENSGT00940000170157 ENSGT00600000084428.b #21 ENSGT00720000108833 #22 ENSGT00880000138031 #23 ENSGT00940000158187 #24 ENSGT00940000158037 #25 ENSGT00940000159389 #26 ENSGT00940000158600.d #27 ENSGT00940000155166.A #28 ENSGT00390000016813 #30 ENSGT00940000155118.o #31 ENSGT00940000154612.m.a.c ENSGT00940000155067.a #32 ENSGT00940000158254 #33 ENSGT00950000183117.a.a #34 ENSGT00390000000062.x.a #35 ENSGT00390000006747 #36 ENSGT01030000234578.B.a #37 Hybrid Bos Indicus MODERN SPECIES 24 ELK3 (ENSBIXG00005017581) #7 CDK17 (ENSBIXG00005002870) #8 CFAP54 (ENSBIXG00005017724) ENSBIXG00005017766 NEDD1 (ENSBIXG00005017834) #11 ENSBIXG00005005430 #12 SLC25A3 (ENSBIXG00005005592) #13 IKBIP (ENSBIXG00005018134) #14 APAF1 (ENSBIXG00005018257) #15 ENSBIXG00005018298 ENSBIXG00005018300 ENSBIXG00005002963 ANKS1B (ENSBIXG00005018683) #17 ENSBIXG00005018751 BLTP3B (ENSBIXG00005018834) #21 ACTR6 (ENSBIXG00005018932) #22 SCYL2 (ENSBIXG00005019128) #23 SLC17A8 (ENSBIXG00005019172) #24 NR1H4 (ENSBIXG00005019293) #25 GAS2L3 (ENSBIXG00005019358) #26 ENSBIXG00005003144 ANO4 (ENSBIXG00005003189) #27 ENSBIXG00005019628 SLC5A8 (ENSBIXG00005019682) #28 ENSBIXG00005019697 UTP20 (ENSBIXG00005003225) #30 ARL1 (ENSBIXG00005019884) #31 ENSBIXG00005003254 SPIC (ENSBIXG00005019938) #32 ENSBIXG00005019949 MYBPC1 (ENSBIXG00005020157) #33 Cow DUPLICATION Cow MODERN SPECIES 24 ENSBTAG00000002251 #9 ENSBTAG00000052520 #10 CFAP54 (ENSBTAG00000015792) NEDD1 (ENSBTAG00000001894) #11 ENSBTAG00000051433 ENSBTAG00000045919 TMPO (ENSBTAG00000004240) ##12 SLC25A3 (ENSBTAG00000012890) #13 IKBIP (ENSBTAG00000021660) #14 APAF1 (ENSBTAG00000021661) #15 ENSBTAG00000030994 #17 ENSBTAG00000025812 ENSBTAG00000013979 #17 ENSBTAG00000048834 BLTP3B (ENSBTAG00000006040) #21 ACTR6 (ENSBTAG00000013842) #22 SCYL2 (ENSBTAG00000013859) #23 SLC17A8 (ENSBTAG00000001088) #24 NR1H4 (ENSBTAG00000013596) #25 GAS2L3 (ENSBTAG00000049308) #26 ANO4 (ENSBTAG00000004145) #27 SLC5A8 (ENSBTAG00000011525) #28 UTP20 (ENSBTAG00000003239) #30 ARL1 (ENSBTAG00000011883) #31 ENSBTAG00000008020 SPIC (ENSBTAG00000009904) #32 MYBPC1 (ENSBTAG00000011392) #33 ENSBTAG00000048643 CHPT1 (ENSBTAG00000002490) #34 SYCP3 (ENSBTAG00000002492) #35 GNPTAB (ENSBTAG00000019409) #36 Cow MODERN SPECIES 20 CL46 (ENSBTAG00000006536) ENSBTAG00000052810 CL43 (ENSBTAG00000054756) ENSBTAG00000048082 SFTPD (ENSBTAG00000046421) MBL1 (ENSBTAG00000054761) SFTPA1 (ENSBTAG00000023032) MAT1A (ENSBTAG00000005963) DYDC1 (ENSBTAG00000032858) DYDC2 (ENSBTAG00000032862) PRXL2A (ENSBTAG00000021416) TSPAN14 (ENSBTAG00000003907) SH2D4B (ENSBTAG00000003910) NRG3 (ENSBTAG00000009587) ENSBTAG00000051629 ENSBTAG00000052588 #22 GHITM (ENSBTAG00000032829) GPR15LG (ENSBTAG00000050197) CDHR1 (ENSBTAG00000001231) LRIT2 (ENSBTAG00000023987) LRIT1 (ENSBTAG00000003442) RGR (ENSBTAG00000015681) CCSER2 (ENSBTAG00000017611) ENSBTAG00000020609 GRID1 (ENSBTAG00000019623) ENSBTAG00000052026 WAPL (ENSBTAG00000012213) OPN4 (ENSBTAG00000032800) LDB3 (ENSBTAG00000018707) BMPR1A (ENSBTAG00000000231) MMRN2 (ENSBTAG00000003510) American bison DUPLICATION American bison MODERN SPECIES 3373 MTM1 (ENSBBBG00000017063) ENSBBBG00000017018 ENSBBBG00000016958 ENSBBBG00000016945 ENSBBBG00000016934 #12 SLC25A3 (ENSBBBG00000016783) #13 IKBIP (ENSBBBG00000016711) #14 APAF1 (ENSBBBG00000016661) #15 ANKS1B (ENSBBBG00000016259) #17 ENSBBBG00000015782 BLTP3B (ENSBBBG00000015769) #21 ENSBBBG00000015721 #22 SCYL2 (ENSBBBG00000003913) #23 SLC17A8 (ENSBBBG00000015632) #24 NR1H4 (ENSBBBG00000003455) #25 GAS2L3 (ENSBBBG00000015577) #26 ENSBBBG00000003871 American bison MODERN SPECIES 3255 ENSBBBG00000010486 ENSBBBG00000010477 #22 ENSBBBG00000010469 GPR15LG (ENSBBBG00000010463) CDHR1 (ENSBBBG00000010458) LRIT2 (ENSBBBG00000001821) LRIT1 (ENSBBBG00000010448) RGR (ENSBBBG00000010446) CCSER2 (ENSBBBG00000008138) GRID1 (ENSBBBG00000010400) WAPL (ENSBBBG00000010375) OPN4 (ENSBBBG00000010329) LDB3 (ENSBBBG00000010306) BMPR1A (ENSBBBG00000000071) MMRN2 (ENSBBBG00000000083) SNCG (ENSBBBG00000000096) ADIRF (ENSBBBG00000000102) Eulipotyphla ANCESTRAL SPECIES 2419 ENSGT00720000108833 #22 ENSGT00950000182976.a.a Hedgehog MODERN SPECIES 7578 ACTR6 (ENSEEUG00000014498) #22 Common shrew MODERN SPECIES 4719 ACTR6 (ENSSARG00000009315) #22 ENSSARG00000009348 Atlantogenata ANCESTRAL SPECIES 16 ENSGT00390000008645 ENSGT00390000009047.b ENSGT00940000156375 ENSGT00940000157129 #7 ENSGT00940000155834 #8 ENSGT00940000162970 #9 ENSGT00940000164546 ENSGT00940000162446 ENSGT00390000001561 #11 ENSGT00940000154098.a.d #12 ENSGT00390000008708 #13 ENSGT00500000045001 #14 ENSGT00940000157710 #15 ENSGT00940000154572 #17 ENSGT00600000084428.b #21 ENSGT00720000108833 #22 ENSGT00950000182976.a.a ENSGT00880000138031 #23 ENSGT00940000158187 #24 ENSGT00940000158037 #25 ENSGT00940000159389 #26 ENSGT00940000158600 #27 ENSGT00940000155166.A #28 ENSGT00390000016813 #30 ENSGT00940000155118 #31 ENSGT00940000155067.a #32 ENSGT00940000158254 #33 ENSGT00950000183117.a.a #34 ENSGT00390000000062.x.a #35 ENSGT00390000006747 #36 ENSGT01030000234578.B.a #37 Afrotheria ANCESTRAL SPECIES 8 ENSGT00940000153110.B ENSGT00390000008645 ENSGT00390000009047.b ENSGT00940000156375 ENSGT00940000157129 #7 ENSGT00940000155834 #8 ENSGT00940000162970 #9 ENSGT00940000164546 ENSGT00390000001561 #11 ENSGT00940000154098.a.d #12 ENSGT00390000008708 #13 ENSGT00500000045001 #14 ENSGT00940000157710 #15 ENSGT00940000154572 #17 ENSGT00600000084428.b #21 ENSGT00720000108833 #22 ENSGT00950000182976.a.a ENSGT00880000138031 #23 ENSGT00940000158187 #24 ENSGT00940000158037 #25 ENSGT00940000159389 #26 ENSGT00940000158600 #27 ENSGT00940000155166.A #28 ENSGT00390000016813 #30 ENSGT00940000155118 #31 ENSGT00940000155067.a #32 ENSGT00940000158254 #33 ENSGT00950000183117.a.a #34 ENSGT00390000000062.x.a #35 ENSGT00390000006747 #36 ENSGT01030000234578.B.a #37 Afrotheria_a ANCESTRAL SPECIES 8 ENSGT00940000153110.B ENSGT00390000008645 ENSGT00390000009047.b ENSGT00940000156375 ENSGT00940000157129 #7 ENSGT00940000155834 #8 ENSGT00940000162970 #9 ENSGT00940000164546 ENSGT00390000001561 #11 ENSGT00940000154098.a.d #12 ENSGT00390000008708 #13 ENSGT00500000045001 #14 ENSGT00940000157710 #15 ENSGT00940000154572 #17 ENSGT00600000084428.b #21 ENSGT00720000108833 #22 ENSGT00950000182976.a.a ENSGT00880000138031 #23 ENSGT00940000158187 #24 ENSGT00940000158037 #25 ENSGT00940000159389 #26 ENSGT00940000158600 #27 ENSGT00940000155166.A #28 ENSGT00390000016813 #30 ENSGT00940000155118 #31 ENSGT00940000155067.a #32 ENSGT00940000158254 #33 ENSGT00950000183117.a.a #34 ENSGT00390000000062.x.a #35 ENSGT00390000006747 #36 ENSGT01030000234578.B.a #37 Elephant MODERN SPECIES 196 AMDHD1 (ENSLAFG00000009812) HAL (ENSLAFG00000009816) LTA4H (ENSLAFG00000009821) ELK3 (ENSLAFG00000004269) #7 CDK17 (ENSLAFG00000004270) #8 ENSLAFG00000002765 #9 ENSLAFG00000005062 NEDD1 (ENSLAFG00000006312) #11 ENSLAFG00000014311 #12 SLC25A3 (ENSLAFG00000002007) #13 IKBIP (ENSLAFG00000014642) #14 APAF1 (ENSLAFG00000014645) #15 ANKS1B (ENSLAFG00000014651) #17 ENSLAFG00000014660 BLTP3B (ENSLAFG00000001375) #21 ACTR6 (ENSLAFG00000001011) #22 ENSLAFG00000011615 SCYL2 (ENSLAFG00000012773) #23 SLC17A8 (ENSLAFG00000011364) #24 NR1H4 (ENSLAFG00000009154) #25 GAS2L3 (ENSLAFG00000012363) #26 ANO4 (ENSLAFG00000002161) #27 SLC5A8 (ENSLAFG00000002166) #28 UTP20 (ENSLAFG00000012983) #30 ARL1 (ENSLAFG00000026143) #31 SPIC (ENSLAFG00000015661) #32 MYBPC1 (ENSLAFG00000004666) #33 ENSLAFG00000027866 CHPT1 (ENSLAFG00000004678) #34 GNPTAB (ENSLAFG00000004687) #36 DRAM1 (ENSLAFG00000004688) #37 Hyrax MODERN SPECIES 8907 ACTR6 (ENSPCAG00000002048) #22 Tenrec MODERN SPECIES 6945 ACTR6 (ENSETEG00000012001) #22 ENSETEG00000012003 Xenarthra ANCESTRAL SPECIES 406 ENSGT00600000084428.b #21 ENSGT00720000108833 #22 ENSGT00880000138031 #23 ENSGT00940000158187 #24 ENSGT00940000158037 #25 ENSGT00940000159389 #26 ENSGT00940000158600 #27 ENSGT00940000155166.A #28 ENSGT00390000016813 #30 ENSGT00940000155067.a #32 ENSGT00940000158254 #33 Armadillo MODERN SPECIES 2626 ENSDNOG00000038990 #17 BLTP3B (ENSDNOG00000013742) #21 ENSDNOG00000031633 #22 SCYL2 (ENSDNOG00000010714) #23 SLC17A8 (ENSDNOG00000010749) #24 NR1H4 (ENSDNOG00000047912) #25 GAS2L3 (ENSDNOG00000038024) #26 ANO4 (ENSDNOG00000002734) #27 SLC5A8 (ENSDNOG00000037439) #28 UTP20 (ENSDNOG00000016845) #30 SPIC (ENSDNOG00000047193) #32 MYBPC1 (ENSDNOG00000014718) #33 ENSDNOG00000040949 #35 ENSDNOG00000017624 #35 ENSDNOG00000006260 #35 Sloth MODERN SPECIES 1107 BLTP3B (ENSCHOG00000010695) #21 ACTR6 (ENSCHOG00000010722) #22 Marsupialia ANCESTRAL SPECIES 11 ENSGT00940000153110.B ENSGT00390000008645 ENSGT00390000009047.b ENSGT00940000156375 ENSGT00940000157129 #7 ENSGT00940000155834 #8 ENSGT00940000162446 ENSGT00390000001561 #11 ENSGT00490000043421 ENSGT00940000154098.a.d #12 ENSGT00390000008708 #13 ENSGT00500000045001 #14 ENSGT00940000157710 #15 ENSGT00940000154572 #17 ENSGT00600000084428.b #21 ENSGT00720000108833 #22 ENSGT00950000182976.a.a ENSGT00880000138031 #23 ENSGT00940000158187 #24 ENSGT00940000158037 #25 ENSGT00940000159389 #26 ENSGT00940000158600 #27 ENSGT00940000155166.A.f #28 ENSGT00940000155166.A.e.b.a #28 ENSGT00940000155166.A.e.b.b #28 ENSGT00940000155166.A.e.a #28 ENSGT00390000016813 #30 ENSGT00940000155118 #31 ENSGT00940000155067.a #32 ENSGT00940000158254 #33 ENSGT00950000183117.a.a #34 Opossum MODERN SPECIES 7 ENSMODG00000007823 #10 ENSMODG00000027889 NEDD1 (ENSMODG00000007794) #11 ENSMODG00000046019 ENSMODG00000046160 ENSMODG00000007728 ENSMODG00000007723 #12 SLC25A3 (ENSMODG00000007717) #13 IKBIP (ENSMODG00000007700) #14 APAF1 (ENSMODG00000007679) #15 ENSMODG00000040381 #17 ENSMODG00000007596 #17 ENSMODG00000039312 ENSMODG00000029538 BLTP3B (ENSMODG00000005181) #21 ACTR6 (ENSMODG00000005122) #22 DEPDC4 (ENSMODG00000005106) SCYL2 (ENSMODG00000005075) #23 ENSMODG00000005023 #24 NR1H4 (ENSMODG00000004996) #25 GAS2L3 (ENSMODG00000004973) #26 ANO4 (ENSMODG00000004966) #27 ENSMODG00000031558 #28 ENSMODG00000004821 #28 ENSMODG00000042882 ENSMODG00000024997 ENSMODG00000024996 ENSMODG00000029070 ENSMODG00000027631 #28 ENSMODG00000028414 #28 ENSMODG00000045282 Marsupialia_b ANCESTRAL SPECIES 13 ENSGT00940000153110.B ENSGT00390000008645 ENSGT00390000009047.b ENSGT00940000156375 ENSGT00940000157129 #7 ENSGT00940000155834 #8 ENSGT00940000162446 ENSGT00390000001561 #11 ENSGT00490000043421 ENSGT00940000154098.a.d #12 ENSGT00390000008708 #13 ENSGT00500000045001 #14 ENSGT00940000157710 #15 ENSGT00940000154572 #17 ENSGT00600000084428.b #21 ENSGT00720000108833 #22 ENSGT00950000182976.a.a ENSGT00880000138031 #23 ENSGT00940000158187 #24 ENSGT00940000158037 #25 ENSGT00940000159389 #26 ENSGT00940000158600 #27 ENSGT00940000155166.A.f.a #28 ENSGT00940000155166.A.e.b.a #28 ENSGT00940000155166.A.e.b.b #28 ENSGT00940000155166.A.e.a #28 ENSGT00390000016813 #30 ENSGT00940000155118 #31 ENSGT00940000155067.a #32 ENSGT00940000158254 #33 ENSGT00950000183117.a.a #34 Diprotodontia ANCESTRAL SPECIES 8 ENSGT01070000255793 ENSGT00390000008645 ENSGT00390000009047.b ENSGT00940000156375 ENSGT00940000157129 #7 ENSGT00940000155834 #8 ENSGT00940000162446 ENSGT00390000001561 #11 ENSGT00490000043421 ENSGT00940000154098.a.d #12 ENSGT00390000008708 #13 ENSGT00500000045001 #14 ENSGT00940000157710 #15 ENSGT00940000154572 #17 ENSGT00600000084428.b #21 ENSGT00720000108833 #22 ENSGT00950000182976.a.a ENSGT00880000138031 #23 ENSGT00940000158187 #24 ENSGT00940000158037 #25 ENSGT00940000159389 #26 ENSGT00940000158600 #27 ENSGT00940000155166.A.f.a #28 ENSGT00940000155166.A.e.b.a #28 ENSGT00940000155166.A.e.b.b #28 ENSGT00940000155166.A.e.a #28 ENSGT00390000016813 #30 ENSGT00940000155118 #31 ENSGT00940000155067.a #32 ENSGT00940000158254 #33 ENSGT00950000183117.a.a #34 Diprotodontia_a ANCESTRAL SPECIES 8 ENSGT01070000255793 ENSGT00390000008645 ENSGT00390000009047.b ENSGT00940000156375 ENSGT00940000157129 #7 ENSGT00940000155834 #8 ENSGT00940000162446 ENSGT00390000001561 #11 ENSGT00490000043421 ENSGT00940000154098.a.d #12 ENSGT00390000008708 #13 ENSGT00500000045001 #14 ENSGT00940000157710 #15 ENSGT00940000154572 #17 ENSGT00600000084428.b #21 ENSGT00720000108833 #22 ENSGT00950000182976.a.a ENSGT00880000138031 #23 ENSGT00940000158187 #24 ENSGT00940000158037 #25 ENSGT00940000159389 #26 ENSGT00940000158600 #27 ENSGT00940000155166.A.f.a #28 ENSGT00940000155166.A.e.b.a #28 ENSGT00940000155166.A.e.b.b #28 ENSGT00940000155166.A.e.a #28 ENSGT00390000016813 #30 ENSGT00940000155118 #31 ENSGT00940000155067.a #32 ENSGT00940000158254 #33 ENSGT00950000183117.a.a #34 Common wonbat MODERN SPECIES 711 AMDHD1 (ENSVURG00010024182) HAL (ENSVURG00010024172) LTA4H (ENSVURG00010024166) ELK3 (ENSVURG00010024163) #7 CDK17 (ENSVURG00010024156) #8 ENSVURG00010024149 NEDD1 (ENSVURG00010024144) #11 ENSVURG00010024138 ENSVURG00010024136 #12 ENSVURG00010024128 #13 IKBIP (ENSVURG00010024126) #14 APAF1 (ENSVURG00010024119) #15 ENSVURG00010024112 #17 ENSVURG00010024110 #17 BLTP3B (ENSVURG00010024101) #21 ACTR6 (ENSVURG00010024098) #22 DEPDC4 (ENSVURG00010024097) SCYL2 (ENSVURG00010024095) #23 SLC17A8 (ENSVURG00010024093) #24 NR1H4 (ENSVURG00010024089) #25 GAS2L3 (ENSVURG00010024084) #26 ANO4 (ENSVURG00010024083) #27 ENSVURG00010024081 ENSVURG00010024079 ENSVURG00010024076 #28 ENSVURG00010024069 #28 ENSVURG00010024066 #28 ENSVURG00010024065 #28 UTP20 (ENSVURG00010024063) #30 ENSVURG00010024062 #31 SPIC (ENSVURG00010024061) #32 koala MODERN SPECIES 360 ENSPCIG00000010765 #17 BLTP3B (ENSPCIG00000010770) #21 ACTR6 (ENSPCIG00000010776) #22 Wallaby MODERN SPECIES 7316 ACTR6 (ENSMEUG00000001845) #22 Tasmanian devil MODERN SPECIES 4 CCDC38 (ENSSHAG00000012322) AMDHD1 (ENSSHAG00000012599) HAL (ENSSHAG00000012778) LTA4H (ENSSHAG00000012983) ELK3 (ENSSHAG00000030924) #7 CDK17 (ENSSHAG00000014275) #8 ENSSHAG00000023875 NEDD1 (ENSSHAG00000016136) #11 ENSSHAG00000026704 ENSSHAG00000023115 #12 SLC25A3 (ENSSHAG00000021483) #13 IKBIP (ENSSHAG00000026418) #14 APAF1 (ENSSHAG00000011224) #15 ANKS1B (ENSSHAG00000011922) #17 BLTP3B (ENSSHAG00000009939) #21 ACTR6 (ENSSHAG00000010695) #22 DEPDC4 (ENSSHAG00000010896) ENSSHAG00000011140 #23 SLC17A8 (ENSSHAG00000011526) #24 NR1H4 (ENSSHAG00000012333) #25 GAS2L3 (ENSSHAG00000030333) #26 ANO4 (ENSSHAG00000014385) #27 ENSSHAG00000014997 #28 ENSSHAG00000027838 #28 ENSSHAG00000004549 #28 UTP20 (ENSSHAG00000002298) #30 ARL1 (ENSSHAG00000028502) #31 SPIC (ENSSHAG00000005809) #32 MYBPC1 (ENSSHAG00000007093) #33 CHPT1 (ENSSHAG00000008105) #34 ENSSHAG00000008390 #35 Platypus MODERN SPECIES 5 NTN4 (ENSOANG00000006613) ENSOANG00000006611 AMDHD1 (ENSOANG00000006610) HAL (ENSOANG00000006609) LTA4H (ENSOANG00000006608) ELK3 (ENSOANG00000006606) #7 CDK17 (ENSOANG00000006604) #8 CFAP54 (ENSOANG00000006601) NEDD1 (ENSOANG00000006600) #11 ENSOANG00000005595 #12 SLC25A3 (ENSOANG00000005594) #13 IKBIP (ENSOANG00000005593) #14 APAF1 (ENSOANG00000005592) #15 ANKS1B (ENSOANG00000020004) #17 BLTP3B (ENSOANG00000005589) #21 ACTR6 (ENSOANG00000041905) #22 DEPDC4 (ENSOANG00000005587) SCYL2 (ENSOANG00000005585) #23 SLC17A8 (ENSOANG00000005584) #24 NR1H4 (ENSOANG00000005583) #25 GAS2L3 (ENSOANG00000050205) #26 ANO4 (ENSOANG00000005581) #27 SLC5A8 (ENSOANG00000020001) #28 UTP20 (ENSOANG00000005578) #30 ARL1 (ENSOANG00000043677) #31 SPIC (ENSOANG00000042898) #32 MYBPC1 (ENSOANG00000005576) #33 CHPT1 (ENSOANG00000005575) #34 ENSOANG00000029439 #35 GNPTAB (ENSOANG00000005574) #36 ENSOANG00000005573 #37 Sauria ANCESTRAL SPECIES 4 ENSGT00390000008645 ENSGT00390000009047.b ENSGT00940000156375 ENSGT00940000157129 #7 ENSGT00940000155834 #8 ENSGT00940000162970 #9 ENSGT01030000235320 #10 ENSGT00940000162446 ENSGT00390000001561 #11 ENSGT00940000154098.a #12 ENSGT00390000008708 #13 ENSGT00500000045001 #14 ENSGT00940000157710 #15 ENSGT00940000154572 #17 ENSGT00600000084428.b #21 ENSGT00720000108833 #22 ENSGT00950000182976.a.a ENSGT00880000138031 #23 ENSGT00940000158187 #24 ENSGT00940000158037 #25 ENSGT00940000159389 #26 ENSGT00940000158600 #27 ENSGT00940000155166.A #28 ENSGT00390000016813 #30 ENSGT00940000155118 #31 ENSGT00390000004003 ENSGT00390000000068 ENSGT01030000235645 ENSGT00950000182953.B.a ENSGT00390000017181 ENSGT00390000001566 Archelosauria ANCESTRAL SPECIES 3 ENSGT00390000008645 ENSGT00390000009047.b ENSGT00940000156375 ENSGT00940000157129 #7 ENSGT00940000155834 #8 ENSGT00940000162970 #9 ENSGT01030000235320 #10 ENSGT00940000162446 ENSGT00390000001561 #11 ENSGT00940000154098.a #12 ENSGT00390000008708 #13 ENSGT00500000045001 #14 ENSGT00940000157710 #15 ENSGT00940000154572 #17 ENSGT00600000084428.b #21 ENSGT00720000108833 #22 ENSGT00950000182976.a.a ENSGT00880000138031 #23 ENSGT00940000158187 #24 ENSGT00940000158037 #25 ENSGT00940000159389 #26 ENSGT00940000158600 #27 ENSGT00940000155166.A #28 ENSGT00390000016813 #30 ENSGT00940000155118 #31 ENSGT00390000004003 ENSGT00390000000068 ENSGT01030000235645 ENSGT00950000182953.B.a ENSGT00390000017181 ENSGT00390000001566 Archosauria ANCESTRAL SPECIES 4 ENSGT00390000008645 ENSGT00390000009047.b ENSGT00940000156375 ENSGT00940000157129 #7 ENSGT00940000155834 #8 ENSGT00940000162970 #9 ENSGT01030000235320 #10 ENSGT00940000162446 ENSGT00390000001561 #11 ENSGT00940000154098.a #12 ENSGT00390000008708 #13 ENSGT00500000045001 #14 ENSGT00940000157710 #15 ENSGT00940000154572 #17 ENSGT00600000084428.b #21 ENSGT00720000108833 #22 ENSGT00950000182976.a.a ENSGT00880000138031 #23 ENSGT00940000158187 #24 ENSGT00940000158037 #25 ENSGT00940000159389 #26 ENSGT00940000158600 #27 ENSGT00940000155166.A #28 ENSGT00390000016813 #30 ENSGT00940000155118 #31 ENSGT00390000004003 ENSGT00390000000068 ENSGT01030000235645 ENSGT00950000182953.B.a ENSGT00390000017181 ENSGT00390000001566 Aves ANCESTRAL SPECIES 1 ENSGT00390000008645 ENSGT00390000009047.b ENSGT00940000156375 ENSGT00940000157129 #7 ENSGT00940000155834 #8 ENSGT00940000162970 #9 ENSGT01030000235320 #10 ENSGT00940000162446 ENSGT00390000001561 #11 ENSGT00940000154098.a #12 ENSGT00390000008708 #13 ENSGT00500000045001 #14 ENSGT00940000157710 #15 ENSGT00940000154572 #17 ENSGT00600000084428.b #21 ENSGT00720000108833 #22 ENSGT00950000182976.a.a ENSGT00880000138031 #23 ENSGT00940000158187 #24 ENSGT00940000158037 #25 ENSGT00940000159389 #26 ENSGT00940000158600 #27 ENSGT00940000155166.A #28 ENSGT00390000016813 #30 ENSGT00940000155118 #31 ENSGT00390000004003 ENSGT00390000000068 ENSGT01030000235645 ENSGT00950000182953.B.a ENSGT00390000017181 ENSGT00390000001566 Neognathae ANCESTRAL SPECIES 3 ENSGT00390000008645 ENSGT00390000009047.b ENSGT00940000156375 ENSGT00940000157129 #7 ENSGT00940000155834 #8 ENSGT00940000162970 #9 ENSGT01030000235320 #10 ENSGT00940000162446 ENSGT00390000001561 #11 ENSGT00940000154098.a #12 ENSGT00390000008708 #13 ENSGT00500000045001 #14 ENSGT00940000157710 #15 ENSGT00940000154572 #17 ENSGT00600000084428.b #21 ENSGT00720000108833 #22 ENSGT00950000182976.a.a ENSGT00880000138031 #23 ENSGT00940000158187 #24 ENSGT00940000158037 #25 ENSGT00940000159389 #26 ENSGT00940000158600 #27 ENSGT00940000155166.A #28 ENSGT00390000016813 #30 ENSGT00940000155118 #31 ENSGT00390000004003 ENSGT00390000000068 ENSGT01030000235645 ENSGT00950000182953.B.a ENSGT00390000017181 ENSGT00390000001566 Neognathae_b ANCESTRAL SPECIES 2 ENSGT00940000156615 ENSGT00940000154818.a.b ENSGT00390000008645 ENSGT00390000009047.b ENSGT00940000156375 ENSGT00940000157129 #7 ENSGT00940000155834 #8 ENSGT00940000162970 #9 ENSGT00390000001561 #11 ENSGT00940000154098.a #12 ENSGT00390000008708 #13 ENSGT00500000045001 #14 ENSGT00940000157710 #15 ENSGT00940000154572 #17 ENSGT00600000084428.b #21 ENSGT00720000108833 #22 ENSGT00950000182976.a.a ENSGT00880000138031 #23 ENSGT00940000158187 #24 ENSGT00940000158037 #25 ENSGT00940000159389 #26 ENSGT00940000158600 #27 ENSGT00940000155166.A #28 ENSGT00390000016813 #30 ENSGT00940000155118 #31 ENSGT00390000004003 ENSGT00390000000068 ENSGT01030000235645 ENSGT00950000182953.B.a ENSGT00390000017181 ENSGT00390000001566 Neognathae_c ANCESTRAL SPECIES ENSGT00940000156615 ENSGT00940000154818.a.b ENSGT00390000008645 ENSGT00390000009047.b ENSGT00940000156375 ENSGT00940000157129 #7 ENSGT00940000155834 #8 ENSGT00940000162970 #9 ENSGT00390000001561 #11 ENSGT00940000154098.a #12 ENSGT00390000008708 #13 ENSGT00500000045001 #14 ENSGT00940000157710 #15 ENSGT00940000154572 #17 ENSGT00600000084428.b #21 ENSGT00720000108833 #22 ENSGT00950000182976.a.a ENSGT00880000138031 #23 ENSGT00940000158187 #24 ENSGT00940000158037 #25 ENSGT00940000159389 #26 ENSGT00940000158600 #27 ENSGT00940000155166.A #28 ENSGT00390000016813 #30 ENSGT00940000155118 #31 ENSGT00390000004003 ENSGT00390000000068 ENSGT00950000182953.B.a ENSGT00390000017181 ENSGT00390000001566 ENSGT00390000014089 Golden eagle MODERN SPECIES 18 ENSACCG00020014858 AMDHD1 (ENSACCG00020014840) HAL (ENSACCG00020014818) LTA4H (ENSACCG00020014249) ELK3 (ENSACCG00020013689) #7 CDK17 (ENSACCG00020013655) #8 ENSACCG00020013596 #9 NEDD1 (ENSACCG00020013535) #11 ENSACCG00020013470 #12 SLC25A3 (ENSACCG00020013400) #13 ENSACCG00020013382 #14 APAF1 (ENSACCG00020013335) #15 ANKS1B (ENSACCG00020013285) #17 ENSACCG00020013250 #17 BLTP3B (ENSACCG00020013229) #21 ACTR6 (ENSACCG00020013203) #22 DEPDC4 (ENSACCG00020013173) SCYL2 (ENSACCG00020013065) #23 SLC17A8 (ENSACCG00020013028) #24 NR1H4 (ENSACCG00020012997) #25 GAS2L3 (ENSACCG00020012971) #26 ANO4 (ENSACCG00020012906) #27 SLC5A8 (ENSACCG00020012758) #28 ENSACCG00020012734 UTP20 (ENSACCG00020012635) #30 ARL1 (ENSACCG00020012587) #31 NUP205 (ENSACCG00020012515) CNOT4 (ENSACCG00020012409) ENSACCG00020012298 STRA8 (ENSACCG00020012231) WDR91 (ENSACCG00020012149) Kakapo MODERN SPECIES 20 ENSSHBG00005011072 AMDHD1 (ENSSHBG00005011109) HAL (ENSSHBG00005011156) LTA4H (ENSSHBG00005011211) ELK3 (ENSSHBG00005011236) #7 CDK17 (ENSSHBG00005011290) #8 ENSSHBG00005011363 #9 NEDD1 (ENSSHBG00005011402) #11 ENSSHBG00005011461 #12 SLC25A3 (ENSSHBG00005011520) #13 ENSSHBG00005011552 #14 APAF1 (ENSSHBG00005011721) #15 ANKS1B (ENSSHBG00005013879) #17 ENSSHBG00005013920 #17 BLTP3B (ENSSHBG00005013937) #21 ACTR6 (ENSSHBG00005013997) #22 DEPDC4 (ENSSHBG00005014022) SCYL2 (ENSSHBG00005014083) #23 SLC17A8 (ENSSHBG00005014121) #24 NR1H4 (ENSSHBG00005014142) #25 GAS2L3 (ENSSHBG00005014176) #26 ANO4 (ENSSHBG00005014268) #27 SLC5A8 (ENSSHBG00005014710) #28 UTP20 (ENSSHBG00005014746) #30 ARL1 (ENSSHBG00005014774) #31 NUP205 (ENSSHBG00005014780) CNOT4 (ENSSHBG00005014812) ENSSHBG00005014858 STRA8 (ENSSHBG00005014918) WDR91 (ENSSHBG00005014937) TMEM140 (ENSSHBG00005014987) Passeriformes ANCESTRAL SPECIES 3 ENSGT00940000156615 ENSGT00940000154818.a.a ENSGT00390000008645 ENSGT00390000009047.b ENSGT00940000156375 ENSGT00940000157129 #7 ENSGT00940000155834 #8 ENSGT00940000162446 ENSGT00940000164439 ENSGT00940000154098.a #12 ENSGT00390000008708 #13 ENSGT00500000045001 #14 ENSGT00940000157710 #15 ENSGT00940000154572 #17 ENSGT00600000084428.b #21 ENSGT00720000108833 #22 ENSGT00950000182976.a.a ENSGT00880000138031 #23 ENSGT00940000158187 #24 ENSGT00940000158037 #25 ENSGT00940000159389 #26 ENSGT00940000158600 #27 ENSGT00940000155166.A #28 ENSGT00390000016813 #30 ENSGT00940000155118 #31 ENSGT00390000004003 ENSGT00390000000068 ENSGT01030000235645 ENSGT00950000182953.B.a ENSGT00390000017181 ENSGT00390000001566 Passeriformes_d ANCESTRAL SPECIES 3 ENSGT00390000008645 ENSGT00390000009047.b ENSGT00940000156375 ENSGT00940000157129 #7 ENSGT00940000155834 #8 ENSGT00940000162970 #9 ENSGT01030000235320 #10 ENSGT00940000162446 ENSGT00940000164439 ENSGT00940000154098.a #12 ENSGT00390000008708 #13 ENSGT00500000045001 #14 ENSGT00940000157710 #15 ENSGT00940000154572 #17 ENSGT00600000084428.b #21 ENSGT00720000108833 #22 ENSGT00950000182976.a.a ENSGT00880000138031 #23 ENSGT00940000158187 #24 ENSGT00940000158037 #25 ENSGT00940000159389 #26 ENSGT00940000158600 #27 ENSGT00940000155166.A #28 ENSGT00390000016813 #30 ENSGT00940000155118 #31 ENSGT00390000004003 ENSGT00390000000068 ENSGT01030000235645 ENSGT00950000182953.B.a ENSGT00390000017181 ENSGT00390000001566 Passeriformes_g ANCESTRAL SPECIES 4 ENSGT00940000154818.a.a ENSGT00940000154818.a.b ENSGT00390000008645 ENSGT00390000009047.b ENSGT00940000156375 ENSGT00940000157129 #7 ENSGT00940000155834 #8 ENSGT00940000162446 ENSGT00940000164439 ENSGT00940000154098.a #12 ENSGT00390000008708 #13 ENSGT00500000045001 #14 ENSGT00940000157710 #15 ENSGT00940000154572 #17 ENSGT00600000084428.b #21 ENSGT00720000108833 #22 ENSGT00950000182976.a.a ENSGT00880000138031 #23 ENSGT00940000158187 #24 ENSGT00940000158037 #25 ENSGT00940000159389 #26 ENSGT00940000158600 #27 ENSGT00940000155166.A #28 ENSGT00390000016813 #30 ENSGT00940000155118 #31 ENSGT00390000004003 ENSGT00390000000068 ENSGT01030000235645 ENSGT00950000182953.B.a ENSGT00390000017181 ENSGT00390000001566 Medium ground finch MODERN SPECIES 34 NTN4 (ENSGFOG00000001708) ENSGFOG00000001723 AMDHD1 (ENSGFOG00000001741) HAL (ENSGFOG00000001801) LTA4H (ENSGFOG00000002021) ELK3 (ENSGFOG00000002881) #7 CDK17 (ENSGFOG00000002895) #8 ENSGFOG00000002961 #10 ENSGFOG00000003002 ENSGFOG00000003032 #12 SLC25A3 (ENSGFOG00000003080) #13 IKBIP (ENSGFOG00000003453) #14 APAF1 (ENSGFOG00000003470) #15 ANKS1B (ENSGFOG00000003511) #17 BLTP3B (ENSGFOG00000003544) #21 ACTR6 (ENSGFOG00000003578) #22 DEPDC4 (ENSGFOG00000003594) SCYL2 (ENSGFOG00000003619) #23 SLC17A8 (ENSGFOG00000003682) #24 NR1H4 (ENSGFOG00000003720) #25 GAS2L3 (ENSGFOG00000003760) #26 ANO4 (ENSGFOG00000003787) #27 SLC5A8 (ENSGFOG00000003842) #28 UTP20 (ENSGFOG00000003934) #30 ARL1 (ENSGFOG00000004261) #31 ENSGFOG00000004268 ENSGFOG00000004283 CNOT4 (ENSGFOG00000004330) ENSGFOG00000004355 STRA8 (ENSGFOG00000004416) WDR91 (ENSGFOG00000004456) Passeroidea ANCESTRAL SPECIES 3 ENSGT00940000154818.a.a ENSGT00940000154818.a.b ENSGT00390000008645 ENSGT00390000009047.b ENSGT00940000156375 ENSGT00940000157129 #7 ENSGT00940000155834 #8 ENSGT00940000162446 ENSGT00940000164439 ENSGT00940000154098.a #12 ENSGT00390000008708 #13 ENSGT00500000045001 #14 ENSGT00940000157710 #15 ENSGT00940000154572 #17 ENSGT00600000084428.b #21 ENSGT00720000108833 #22 ENSGT00950000182976.a.a ENSGT00880000138031 #23 ENSGT00940000158187 #24 ENSGT00940000158037 #25 ENSGT00940000159389 #26 ENSGT00940000158600 #27 ENSGT00940000155166.A #28 ENSGT00390000016813 #30 ENSGT00940000155118 #31 ENSGT00390000004003 ENSGT00390000000068 ENSGT01030000235645 ENSGT00950000182953.B.a ENSGT00390000017181 ENSGT00390000001566 Zebra finch MODERN SPECIES 11 NTN4 (ENSTGUG00000008466) SNRPF (ENSTGUG00000024961) AMDHD1 (ENSTGUG00000008491) HAL (ENSTGUG00000008503) LTA4H (ENSTGUG00000008539) ELK3 (ENSTGUG00000008619) #7 CDK17 (ENSTGUG00000008629) #8 CFAP54 (ENSTGUG00000008665) ENSTGUG00000008696 ENSTGUG00000008719 #12 SLC25A3 (ENSTGUG00000020418) #13 IKBIP (ENSTGUG00000023025) #14 APAF1 (ENSTGUG00000008761) #15 ANKS1B (ENSTGUG00000008843) #17 BLTP3B (ENSTGUG00000008861) #21 ACTR6 (ENSTGUG00000008877) #22 DEPDC4 (ENSTGUG00000008896) SCYL2 (ENSTGUG00000008908) #23 SLC17A8 (ENSTGUG00000008937) #24 NR1H4 (ENSTGUG00000008977) #25 ANO4 (ENSTGUG00000009008) #27 SLC5A8 (ENSTGUG00000009037) #28 UTP20 (ENSTGUG00000009053) #30 ARL1 (ENSTGUG00000009085) #31 NUP205 (ENSTGUG00000009105) CNOT4 (ENSTGUG00000009161) ENSTGUG00000009170 STRA8 (ENSTGUG00000009183) WDR91 (ENSTGUG00000009190) ENSTGUG00000021985 TMEM140 (ENSTGUG00000026726) Common canary MODERN SPECIES 6 AMDHD1 (ENSSCAG00000007086) HAL (ENSSCAG00000007068) LTA4H (ENSSCAG00000007065) ELK3 (ENSSCAG00000007062) #7 CDK17 (ENSSCAG00000007054) #8 ENSSCAG00000007043 #9 ENSSCAG00000007029 ENSSCAG00000007014 #12 SLC25A3 (ENSSCAG00000007005) #13 IKBIP (ENSSCAG00000007000) #14 APAF1 (ENSSCAG00000006979) #15 ENSSCAG00000006967 #17 ENSSCAG00000006954 #17 ENSSCAG00000006950 #17 BLTP3B (ENSSCAG00000006936) #21 ACTR6 (ENSSCAG00000006930) #22 DEPDC4 (ENSSCAG00000006924) SCYL2 (ENSSCAG00000006917) #23 SLC17A8 (ENSSCAG00000006910) #24 NR1H4 (ENSSCAG00000006898) #25 GAS2L3 (ENSSCAG00000006890) #26 ANO4 (ENSSCAG00000006863) #27 SLC5A8 (ENSSCAG00000006787) #28 UTP20 (ENSSCAG00000006736) #30 ARL1 (ENSSCAG00000006726) #31 NUP205 (ENSSCAG00000006709) CNOT4 (ENSSCAG00000006689) ENSSCAG00000006686 ENSSCAG00000006681 STRA8 (ENSSCAG00000006667) WDR91 (ENSSCAG00000006558) Flycatcher MODERN SPECIES 10 AMDHD1 (ENSFALG00000010808) HAL (ENSFALG00000027973) ENSFALG00000010866 ENSFALG00000027964 ELK3 (ENSFALG00000010890) #7 CDK17 (ENSFALG00000010898) #8 ENSFALG00000027198 #9 ENSFALG00000023041 #10 ENSFALG00000010924 ENSFALG00000010958 #12 SLC25A3 (ENSFALG00000026978) #13 IKBIP (ENSFALG00000010992) #14 APAF1 (ENSFALG00000010994) #15 ANKS1B (ENSFALG00000011002) #17 BLTP3B (ENSFALG00000011011) #21 ACTR6 (ENSFALG00000011019) #22 DEPDC4 (ENSFALG00000011024) SCYL2 (ENSFALG00000011030) #23 SLC17A8 (ENSFALG00000011054) #24 NR1H4 (ENSFALG00000011082) #25 GAS2L3 (ENSFALG00000011087) #26 ANO4 (ENSFALG00000011097) #27 SLC5A8 (ENSFALG00000011124) #28 UTP20 (ENSFALG00000011135) #30 ARL1 (ENSFALG00000011156) #31 NUP205 (ENSFALG00000011170) CNOT4 (ENSFALG00000011194) ENSFALG00000011238 STRA8 (ENSFALG00000011279) WDR91 (ENSFALG00000011292) ENSFALG00000026856 Great tit MODERN SPECIES 10 NTN4 (ENSPMJG00000012900) SNRPF (ENSPMJG00000012901) AMDHD1 (ENSPMJG00000012902) HAL (ENSPMJG00000012906) LTA4H (ENSPMJG00000012909) ELK3 (ENSPMJG00000012914) #7 CDK17 (ENSPMJG00000012917) #8 CFAP54 (ENSPMJG00000012922) ENSPMJG00000012926 ENSPMJG00000012936 #12 SLC25A3 (ENSPMJG00000012937) #13 IKBIP (ENSPMJG00000012939) #14 APAF1 (ENSPMJG00000012940) #15 ANKS1B (ENSPMJG00000012949) #17 BLTP3B (ENSPMJG00000013212) #21 ACTR6 (ENSPMJG00000013213) #22 DEPDC4 (ENSPMJG00000013214) SCYL2 (ENSPMJG00000013215) #23 SLC17A8 (ENSPMJG00000013223) #24 NR1H4 (ENSPMJG00000013226) #25 GAS2L3 (ENSPMJG00000013227) #26 ANO4 (ENSPMJG00000013228) #27 SLC5A8 (ENSPMJG00000013229) #28 UTP20 (ENSPMJG00000013230) #30 ARL1 (ENSPMJG00000013232) #31 NUP205 (ENSPMJG00000013233) CNOT4 (ENSPMJG00000013234) ENSPMJG00000013235 STRA8 (ENSPMJG00000013236) WDR91 (ENSPMJG00000013237) ENSPMJG00000013249 Galloanserae ANCESTRAL SPECIES 3 ENSGT00390000008645 ENSGT00390000009047.b ENSGT00940000156375 ENSGT00940000157129 #7 ENSGT00940000155834 #8 ENSGT00940000162970 #9 ENSGT01030000235320 #10 ENSGT00940000162446 ENSGT00390000001561 #11 ENSGT00940000154098.a #12 ENSGT00390000008708 #13 ENSGT00500000045001 #14 ENSGT00940000157710 #15 ENSGT00940000154572 #17 ENSGT00600000084428.b #21 ENSGT00720000108833 #22 ENSGT00880000138031 #23 ENSGT00940000158187 #24 ENSGT00940000158037 #25 ENSGT00940000159389 #26 ENSGT00940000158600 #27 ENSGT00940000155166.A #28 ENSGT00390000016813 #30 ENSGT00940000155118 #31 ENSGT00390000004003 ENSGT00390000000068 ENSGT00950000182953.B.a ENSGT00390000017181 ENSGT00390000001566 ENSGT00960000189329 ENSGT00390000014089 Anatidae ANCESTRAL SPECIES 14 ENSGT00940000156615 ENSGT00940000154818.a.a ENSGT00390000008645 ENSGT00390000009047.b ENSGT00940000156375 ENSGT00940000157129 #7 ENSGT00940000155834 #8 ENSGT00940000162446 ENSGT00390000001561 #11 ENSGT00940000154098.a #12 ENSGT00390000008708 #13 ENSGT00500000045001 #14 ENSGT00940000157710 #15 ENSGT00940000154572 #17 ENSGT00600000084428.b #21 ENSGT00720000108833 #22 ENSGT00880000138031 #23 ENSGT00940000158187 #24 ENSGT00940000158037 #25 ENSGT00940000159389 #26 ENSGT00940000158600 #27 ENSGT00940000155166.A #28 ENSGT00390000016813 #30 ENSGT00940000155118 #31 ENSGT00390000004003 ENSGT00390000000068 ENSGT00950000182953.B.a ENSGT00390000017181 ENSGT00390000001566 ENSGT00390000014089 ENSGT00940000160916 Pink-footed goose MODERN SPECIES 22 NTN4 (ENSABRG00000011580) SNRPF (ENSABRG00000011589) AMDHD1 (ENSABRG00000011591) HAL (ENSABRG00000011632) LTA4H (ENSABRG00000012435) ELK3 (ENSABRG00000012443) #7 CDK17 (ENSABRG00000012457) #8 CFAP54 (ENSABRG00000012499) NEDD1 (ENSABRG00000012646) #11 ENSABRG00000012704 #12 SLC25A3 (ENSABRG00000012730) #13 IKBIP (ENSABRG00000012876) #14 APAF1 (ENSABRG00000012938) #15 ANKS1B (ENSABRG00000013567) #17 BLTP3B (ENSABRG00000013819) #21 ACTR6 (ENSABRG00000013827) #22 SCYL2 (ENSABRG00000013839) #23 SLC17A8 (ENSABRG00000013851) #24 NR1H4 (ENSABRG00000013877) #25 GAS2L3 (ENSABRG00000013903) #26 ANO4 (ENSABRG00000013932) #27 SLC5A8 (ENSABRG00000014007) #28 UTP20 (ENSABRG00000014107) #30 ARL1 (ENSABRG00000014394) #31 NUP205 (ENSABRG00000014490) CNOT4 (ENSABRG00000015473) ENSABRG00000015708 STRA8 (ENSABRG00000015796) WDR91 (ENSABRG00000015805) TMEM140 (ENSABRG00000015816) AGBL3 (ENSABRG00000015825) Duck MODERN SPECIES ENSAPLG00000025869 AMDHD1 (ENSAPLG00000003873) HAL (ENSAPLG00000003775) LTA4H (ENSAPLG00000002921) ELK3 (ENSAPLG00000002810) #7 CDK17 (ENSAPLG00000002462) #8 ENSAPLG00000002309 #9 ENSAPLG00000016247 ENSAPLG00000010072 #12 SLC25A3 (ENSAPLG00000020761) #13 ENSAPLG00000010351 #14 APAF1 (ENSAPLG00000010387) #15 ANKS1B (ENSAPLG00000011148) #17 ENSAPLG00000011425 #17 BLTP3B (ENSAPLG00000011479) #21 ACTR6 (ENSAPLG00000012204) #22 SCYL2 (ENSAPLG00000012666) #23 SLC17A8 (ENSAPLG00000012919) #24 NR1H4 (ENSAPLG00000013289) #25 GAS2L3 (ENSAPLG00000013956) #26 ANO4 (ENSAPLG00000014449) #27 SLC5A8 (ENSAPLG00000015303) #28 UTP20 (ENSAPLG00000015651) #30 ARL1 (ENSAPLG00000016092) #31 NUP205 (ENSAPLG00000016163) CNOT4 (ENSAPLG00000016441) ENSAPLG00000002381 STRA8 (ENSAPLG00000002652) WDR91 (ENSAPLG00000002770) TMEM140 (ENSAPLG00000022691) AGBL3 (ENSAPLG00000003396) Phasianidae ANCESTRAL SPECIES ENSGT00390000008645 ENSGT00390000009047.b ENSGT00940000156375 ENSGT00940000157129 #7 ENSGT00940000155834 #8 ENSGT00940000162970 #9 ENSGT01030000235320 #10 ENSGT00940000162446 ENSGT00940000164439 ENSGT00940000154098.a #12 ENSGT00390000008708 #13 ENSGT00500000045001 #14 ENSGT00940000157710 #15 ENSGT00940000154572 #17 ENSGT00600000084428.b #21 ENSGT00720000108833 #22 ENSGT00880000138031 #23 ENSGT00940000158187 #24 ENSGT00940000158037 #25 ENSGT00940000159389 #26 ENSGT00940000158600 #27 ENSGT00940000155166.A #28 ENSGT00390000016813 #30 ENSGT00940000155118 #31 ENSGT00390000004003 ENSGT00390000000068 ENSGT00950000182953.B.a ENSGT00390000017181 ENSGT00390000001566 ENSGT00960000189329 ENSGT00390000014089 Japanese quail MODERN SPECIES NTN4 (ENSCJPG00005005005) SNRPF (ENSCJPG00005005007) AMDHD1 (ENSCJPG00005005008) HAL (ENSCJPG00005005017) LTA4H (ENSCJPG00005005020) ELK3 (ENSCJPG00005005029) #7 CDK17 (ENSCJPG00005005036) #8 CFAP54 (ENSCJPG00005005038) ENSCJPG00005005055 ENSCJPG00005005094 #12 SLC25A3 (ENSCJPG00005005099) #13 ENSCJPG00005005104 #14 APAF1 (ENSCJPG00005005109) #15 ANKS1B (ENSCJPG00005005999) #17 BLTP3B (ENSCJPG00005007360) #21 ACTR6 (ENSCJPG00005007379) #22 SCYL2 (ENSCJPG00005007380) #23 SLC17A8 (ENSCJPG00005007381) #24 NR1H4 (ENSCJPG00005007383) #25 GAS2L3 (ENSCJPG00005007384) #26 ANO4 (ENSCJPG00005007403) #27 SLC5A8 (ENSCJPG00005007405) #28 UTP20 (ENSCJPG00005007406) #30 ARL1 (ENSCJPG00005007421) #31 NUP205 (ENSCJPG00005007423) CNOT4 (ENSCJPG00005008206) ENSCJPG00005008371 STRA8 (ENSCJPG00005008372) WDR91 (ENSCJPG00005008373) TMEM140 (ENSCJPG00005008383) ENSCJPG00005008384 Phasianidae_b ANCESTRAL SPECIES 9 ENSGT00390000008645 ENSGT00390000009047.b ENSGT00940000156375 ENSGT00940000157129 #7 ENSGT00940000155834 #8 ENSGT00940000162970 #9 ENSGT01030000235320 #10 ENSGT00940000162446 ENSGT00940000164439 ENSGT00940000154098.a #12 ENSGT00390000008708 #13 ENSGT00500000045001 #14 ENSGT00940000157710 #15 ENSGT00940000154572 #17 ENSGT00600000084428.b #21 ENSGT00720000108833 #22 ENSGT00880000138031 #23 ENSGT00940000158187 #24 ENSGT00940000158037 #25 ENSGT00940000159389 #26 ENSGT00940000158600 #27 ENSGT00940000155166.A #28 ENSGT00390000016813 #30 ENSGT00940000155118 #31 ENSGT00390000004003 ENSGT00390000000068 ENSGT00950000182953.B.a ENSGT00390000017181 ENSGT00390000001566 ENSGT00960000189329 ENSGT00390000014089 Chicken MODERN SPECIES SNRPF (ENSGALG00010011868) AMDHD1 (ENSGALG00010011876) HAL (ENSGALG00010011891) LTA4H (ENSGALG00010011903) ELK3 (ENSGALG00010011929) #7 CDK17 (ENSGALG00010011953) #8 CFAP54 (ENSGALG00010011960) NEDD1 (ENSGALG00010011979) TMPO (ENSGALG00010014294) #12 SLC25A3 (ENSGALG00010010588) #13 IKBIP (ENSGALG00010010614) #14 APAF1 (ENSGALG00010010618) #15 ENSGALG00010014314 #17 ENSGALG00010010629 #17 BLTP3B (ENSGALG00010011480) #21 ACTR6 (ENSGALG00010011496) #22 SCYL2 (ENSGALG00010011529) #23 SLC17A8 (ENSGALG00010011553) #24 NR1H4 (ENSGALG00010011566) #25 GAS2L3 (ENSGALG00010011574) #26 ANO4 (ENSGALG00010011601) #27 SLC5A8 (ENSGALG00010011616) #28 UTP20 (ENSGALG00010011663) #30 ARL1 (ENSGALG00010011692) #31 NUP205 (ENSGALG00010011702) CNOT4 (ENSGALG00010010111) ENSGALG00010010142 STRA8 (ENSGALG00010010177) WDR91 (ENSGALG00010012016) ENSGALG00010012022 TMEM140 (ENSGALG00010012028) Turkey MODERN SPECIES HAL (ENSMGAG00000011460) LTA4H (ENSMGAG00000011484) ELK3 (ENSMGAG00000011496) #7 CDK17 (ENSMGAG00000011506) #8 ENSMGAG00000011518 #9 ENSMGAG00000019626 #10 CFAP54 (ENSMGAG00000011526) ENSMGAG00000011537 ENSMGAG00000011543 #12 SLC25A3 (ENSMGAG00000011563) #13 IKBIP (ENSMGAG00000011570) #14 APAF1 (ENSMGAG00000011573) #15 ENSMGAG00000023009 #17 ENSMGAG00000011607 #17 BLTP3B (ENSMGAG00000011618) #21 ACTR6 (ENSMGAG00000011643) #22 SCYL2 (ENSMGAG00000011660) #23 SLC17A8 (ENSMGAG00000011674) #24 NR1H4 (ENSMGAG00000011690) #25 GAS2L3 (ENSMGAG00000011632) #26 ANO4 (ENSMGAG00000011699) #27 SLC5A8 (ENSMGAG00000011713) #28 UTP20 (ENSMGAG00000011726) #30 ARL1 (ENSMGAG00000011748) #31 NUP205 (ENSMGAG00000011752) CNOT4 (ENSMGAG00000011788) ENSMGAG00000011766 STRA8 (ENSMGAG00000011772) WDR91 (ENSMGAG00000011777) ENSMGAG00000019729 TMEM140 (ENSMGAG00000020464) African ostrich MODERN SPECIES 704 ENSSCUG00000015553 #17 BLTP3B (ENSSCUG00000015546) #21 ACTR6 (ENSSCUG00000015527) #22 DEPDC4 (ENSSCUG00000015524) SCYL2 (ENSSCUG00000015517) #23 SLC17A8 (ENSSCUG00000015490) #24 NR1H4 (ENSSCUG00000015476) #25 GAS2L3 (ENSSCUG00000015473) #26 ANO4 (ENSSCUG00000015466) #27 SLC5A8 (ENSSCUG00000015458) #28 UTP20 (ENSSCUG00000015446) #30 ARL1 (ENSSCUG00000015436) #31 NUP205 (ENSSCUG00000015418) CNOT4 (ENSSCUG00000015392) ENSSCUG00000015382 ENSSCUG00000015378 STRA8 (ENSSCUG00000015373) WDR91 (ENSSCUG00000015363) Australian saltwater crocodile MODERN SPECIES 49 LTA4H (ENSCPRG00005019109) HAL (ENSCPRG00005019112) ELK3 (ENSCPRG00005019116) #7 CDK17 (ENSCPRG00005019118) #8 ENSCPRG00005019119 #9 ENSCPRG00005019121 #10 NEDD1 (ENSCPRG00005019125) #11 ENSCPRG00005019134 #12 SLC25A3 (ENSCPRG00005019135) #13 ENSCPRG00005019138 #14 APAF1 (ENSCPRG00005019139) #15 ENSCPRG00005019140 #17 ENSCPRG00005019141 #17 ENSCPRG00005019143 #17 BLTP3B (ENSCPRG00005019152) #21 ACTR6 (ENSCPRG00005019155) #22 DEPDC4 (ENSCPRG00005019157) SCYL2 (ENSCPRG00005000219) #23 SLC17A8 (ENSCPRG00005000387) #24 NR1H4 (ENSCPRG00005000403) #25 GAS2L3 (ENSCPRG00005000459) #26 ANO4 (ENSCPRG00005000575) #27 ENSCPRG00005000712 SLC5A8 (ENSCPRG00005000720) #28 UTP20 (ENSCPRG00005000733) #30 ARL1 (ENSCPRG00005000824) #31 NUP205 (ENSCPRG00005000915) CNOT4 (ENSCPRG00005001035) ENSCPRG00005001089 STRA8 (ENSCPRG00005001114) ENSCPRG00005001121 Cryptodira ANCESTRAL SPECIES 11 ENSGT00390000008645 ENSGT00390000009047.b ENSGT00940000156375 ENSGT00940000157129 #7 ENSGT00940000155834 #8 ENSGT00940000162970 #9 ENSGT01030000235320 #10 ENSGT00940000162446 ENSGT00390000001561 #11 ENSGT00940000154098.a #12 ENSGT00390000008708 #13 ENSGT00500000045001 #14 ENSGT00940000157710 #15 ENSGT00940000154572 #17 ENSGT00600000084428.b #21 ENSGT00720000108833 #22 ENSGT00950000182976.a.a ENSGT00880000138031 #23 ENSGT00940000158187 #24 ENSGT00940000158037 #25 ENSGT00940000159389 #26 ENSGT00940000158600 #27 ENSGT00940000155166.A #28 ENSGT00390000016813 #30 ENSGT00940000155118 #31 ENSGT00390000004003 ENSGT00390000000068 ENSGT01030000235645 ENSGT00950000182953.B.a ENSGT00390000017181 ENSGT00390000001566 Testudinoidea ANCESTRAL SPECIES 4 ENSGT00390000008645 ENSGT00390000009047.b ENSGT00940000156375 ENSGT00940000157129 #7 ENSGT00940000155834 #8 ENSGT00940000162970 #9 ENSGT01030000235320 #10 ENSGT00940000162446 ENSGT00390000001561 #11 ENSGT00940000154098.a #12 ENSGT00390000008708 #13 ENSGT00500000045001 #14 ENSGT00940000157710 #15 ENSGT00940000154572 #17 ENSGT00600000084428.b #21 ENSGT00720000108833 #22 ENSGT00950000182976.a.a ENSGT00880000138031 #23 ENSGT00940000158187 #24 ENSGT00940000158037 #25 ENSGT00940000159389 #26 ENSGT00940000158600 #27 ENSGT00940000155166.A #28 ENSGT00390000016813 #30 ENSGT00940000155118 #31 ENSGT00390000004003 ENSGT00390000000068 ENSGT01030000235645 ENSGT00950000182953.B.a ENSGT00390000017181 ENSGT00390000001566 Emydidae ANCESTRAL SPECIES 55 ENSGT00940000153110.B ENSGT00390000008645 ENSGT00390000009047.b ENSGT00940000156375 ENSGT00940000157129 #7 ENSGT00940000155834 #8 ENSGT00940000162446 ENSGT00390000001561 #11 ENSGT00940000154098.a #12 ENSGT00390000008708 #13 ENSGT00500000045001 #14 ENSGT00940000157710 #15 ENSGT00940000154572 #17 ENSGT00990000205100.C ENSGT00600000084428.b #21 ENSGT00720000108833 #22 ENSGT00950000182976.a.a ENSGT00880000138031 #23 ENSGT00940000158187 #24 ENSGT00940000158037 #25 ENSGT00940000159389 #26 ENSGT00940000158600 #27 ENSGT00940000155166.A #28 ENSGT00390000016813 #30 ENSGT00940000155118 #31 ENSGT00390000004003 ENSGT00390000000068 ENSGT01030000235645 ENSGT00950000182953.B.a ENSGT00390000017181 ENSGT00390000001566 Three-toed box turtle MODERN SPECIES 28 LTA4H (ENSTMTG00000005313) ELK3 (ENSTMTG00000005341) #7 CDK17 (ENSTMTG00000005354) #8 ENSTMTG00000005381 #10 NEDD1 (ENSTMTG00000005395) #11 ENSTMTG00000005408 ENSTMTG00000005437 #12 SLC25A3 (ENSTMTG00000005500) #13 IKBIP (ENSTMTG00000005522) #14 APAF1 (ENSTMTG00000005547) #15 ENSTMTG00000005600 #17 ENSTMTG00000005653 #17 ENSTMTG00000005666 ENSTMTG00000005680 #17 BLTP3B (ENSTMTG00000005732) #21 ACTR6 (ENSTMTG00000005993) #22 DEPDC4 (ENSTMTG00000006016) SCYL2 (ENSTMTG00000006038) #23 SLC17A8 (ENSTMTG00000006091) #24 NR1H4 (ENSTMTG00000006147) #25 GAS2L3 (ENSTMTG00000006165) #26 ANO4 (ENSTMTG00000006200) #27 SLC5A8 (ENSTMTG00000006295) #28 UTP20 (ENSTMTG00000006407) #30 ARL1 (ENSTMTG00000007066) #31 NUP205 (ENSTMTG00000007094) CNOT4 (ENSTMTG00000007175) ENSTMTG00000007246 ENSTMTG00000007291 STRA8 (ENSTMTG00000007654) WDR91 (ENSTMTG00000007681) painted turtle MODERN SPECIES 2370 ENSCPBG00000002031 LTA4H (ENSCPBG00000002061) ELK3 (ENSCPBG00000002127) #7 CDK17 (ENSCPBG00000002155) #8 CFAP54 (ENSCPBG00000002200) NEDD1 (ENSCPBG00000002300) #11 ENSCPBG00000002444 ENSCPBG00000004178 ENSCPBG00000004210 #12 SLC25A3 (ENSCPBG00000004261) #13 IKBIP (ENSCPBG00000004281) #14 APAF1 (ENSCPBG00000004307) #15 ANKS1B (ENSCPBG00000004377) #17 ENSCPBG00000004428 BLTP3B (ENSCPBG00000004451) #21 ACTR6 (ENSCPBG00000004488) #22 DEPDC4 (ENSCPBG00000004494) SCYL2 (ENSCPBG00000004524) #23 SLC17A8 (ENSCPBG00000004579) #24 NR1H4 (ENSCPBG00000004615) #25 GAS2L3 (ENSCPBG00000004642) #26 ANO4 (ENSCPBG00000004697) #27 ENSCPBG00000004800 #28 ENSCPBG00000004811 #28 UTP20 (ENSCPBG00000004844) #30 ARL1 (ENSCPBG00000004906) #31 NUP205 (ENSCPBG00000004921) CNOT4 (ENSCPBG00000004959) ENSCPBG00000004999 STRA8 (ENSCPBG00000005357) WDR91 (ENSCPBG00000005388) Testudinidae ANCESTRAL SPECIES 12 ENSGT00940000164757 ENSGT00390000008645 ENSGT00390000009047.b ENSGT00940000156375 ENSGT00940000157129 #7 ENSGT00940000155834 #8 ENSGT00940000162970 #9 ENSGT01030000235320 #10 ENSGT00390000001561 #11 ENSGT00940000154098.a #12 ENSGT00390000008708 #13 ENSGT00500000045001 #14 ENSGT00940000157710 #15 ENSGT00940000154572 #17 ENSGT00600000084428.b #21 ENSGT00720000108833 #22 ENSGT00950000182976.a.a ENSGT00880000138031 #23 ENSGT00940000158187 #24 ENSGT00940000158037 #25 ENSGT00940000159389 #26 ENSGT00940000158600 #27 ENSGT00940000155166.A #28 ENSGT00390000016813 #30 ENSGT00940000155118 #31 ENSGT00390000004003 ENSGT00390000000068 ENSGT00950000182953.B.a ENSGT00390000017181 ENSGT00390000001566 ENSGT00960000189329 Goode s thornscrub tortoise MODERN SPECIES ENSGEVG00005001523 LTA4H (ENSGEVG00005001472) ELK3 (ENSGEVG00005001450) #7 CDK17 (ENSGEVG00005001417) #8 ENSGEVG00005001381 #9 NEDD1 (ENSGEVG00005001329) #11 ENSGEVG00005001274 #12 SLC25A3 (ENSGEVG00005001235) #13 IKBIP (ENSGEVG00005001222) #14 APAF1 (ENSGEVG00005001184) #15 ENSGEVG00005001152 #17 ENSGEVG00005001121 ENSGEVG00005001112 ENSGEVG00005001096 #17 BLTP3B (ENSGEVG00005001029) #21 ACTR6 (ENSGEVG00005000969) #22 DEPDC4 (ENSGEVG00005000939) SCYL2 (ENSGEVG00005000909) #23 SLC17A8 (ENSGEVG00005000875) #24 NR1H4 (ENSGEVG00005000851) #25 GAS2L3 (ENSGEVG00005000793) #26 ENSGEVG00005000756 #27 ENSGEVG00005000697 #27 SLC5A8 (ENSGEVG00005000676) #28 UTP20 (ENSGEVG00005000522) #30 ARL1 (ENSGEVG00005000442) #31 NUP205 (ENSGEVG00005000391) CNOT4 (ENSGEVG00005000320) ENSGEVG00005000137 STRA8 (ENSGEVG00005000039) WDR91 (ENSGEVG00005002228) Abingdon island giant tortoise MODERN SPECIES 1349 ENSCABG00000004360 ELK3 (ENSCABG00000004362) #7 ENSCABG00000004364 #8 ENSCABG00000004365 #8 ENSCABG00000004367 #9 ENSCABG00000004376 #10 NEDD1 (ENSCABG00000004378) #11 ENSCABG00000004397 #12 SLC25A3 (ENSCABG00000004401) #13 IKBIP (ENSCABG00000004405) #14 APAF1 (ENSCABG00000004476) #15 ENSCABG00000006478 #17 ENSCABG00000006480 ENSCABG00000006483 #17 BLTP3B (ENSCABG00000006488) #21 ACTR6 (ENSCABG00000006494) #22 SCYL2 (ENSCABG00000006497) #23 SLC17A8 (ENSCABG00000006502) #24 NR1H4 (ENSCABG00000006514) #25 GAS2L3 (ENSCABG00000006567) #26 ANO4 (ENSCABG00000006582) #27 SLC5A8 (ENSCABG00000006678) #28 UTP20 (ENSCABG00000006683) #30 ARL1 (ENSCABG00000006686) #31 NUP205 (ENSCABG00000006694) CNOT4 (ENSCABG00000007360) ENSCABG00000007363 STRA8 (ENSCABG00000007409) WDR91 (ENSCABG00000007420) ENSCABG00000007514 TMEM140 (ENSCABG00000007516) Chinese turtle MODERN SPECIES 1257 ACTR6 (ENSPSIG00000016086) #22 SCYL2 (ENSPSIG00000016228) #23 SLC17A8 (ENSPSIG00000005348) #24 NR1H4 (ENSPSIG00000005774) #25 GAS2L3 (ENSPSIG00000007108) #26 ANO4 (ENSPSIG00000007612) #27 SLC5A8 (ENSPSIG00000013997) #28 UTP20 (ENSPSIG00000016689) #30 ARL1 (ENSPSIG00000006539) #31 NUP205 (ENSPSIG00000006899) CNOT4 (ENSPSIG00000011256) ENSPSIG00000012985 STRA8 (ENSPSIG00000013824) WDR91 (ENSPSIG00000014113) TMEM140 (ENSPSIG00000015467) AGBL3 (ENSPSIG00000015627) Lepidosauria ANCESTRAL SPECIES 3 ENSGT00390000009047.b ENSGT00940000156375 ENSGT00940000157129 #7 ENSGT00940000155834 #8 ENSGT00940000162970 #9 ENSGT00940000164439 ENSGT01030000235320 #10 ENSGT00940000162446 ENSGT00390000001561 #11 ENSGT00940000154098.a #12 ENSGT00390000008708 #13 ENSGT00500000045001 #14 ENSGT00940000157710 #15 ENSGT00940000154572 #17 ENSGT00600000084428.b #21 ENSGT00720000108833 #22 ENSGT00950000182976.a.a ENSGT00880000138031 #23 ENSGT00940000158187 #24 ENSGT00940000158037 #25 ENSGT00940000159389 #26 ENSGT00940000158600 #27 ENSGT00940000155166.A #28 ENSGT00390000016813 #30 ENSGT00940000155118 #31 ENSGT00390000004003 ENSGT00390000000068 ENSGT00950000182953.B.a ENSGT00390000017181 ENSGT00390000001566 ENSGT00960000189329 Episquamata ANCESTRAL SPECIES 3 ENSGT00390000009047.b ENSGT00940000156375 ENSGT00940000157129 #7 ENSGT00940000155834 #8 ENSGT00940000162970 #9 ENSGT00940000164439 ENSGT01030000235320 #10 ENSGT00940000162446 ENSGT00390000001561 #11 ENSGT00940000154098.a #12 ENSGT00390000008708 #13 ENSGT00500000045001 #14 ENSGT00940000157710 #15 ENSGT00940000154572 #17 ENSGT00600000084428.b #21 ENSGT00720000108833 #22 ENSGT00880000138031 #23 ENSGT00940000158187 #24 ENSGT00940000158037 #25 ENSGT00940000159389 #26 ENSGT00940000158600 #27 ENSGT00940000155166.A.b.b #28 ENSGT00940000155166.A.a #28 ENSGT00390000016813 #30 ENSGT00940000155118 #31 ENSGT00390000004003 ENSGT00390000004383 ENSGT00390000000068 ENSGT00950000182953.B.a ENSGT00390000017181 ENSGT00390000001566 Laterata ANCESTRAL SPECIES 6 ENSGT00390000008645 ENSGT00390000009047.b ENSGT00940000156375 ENSGT00940000157129 #7 ENSGT00940000155834 #8 ENSGT00940000162970 #9 ENSGT01030000235320 #10 ENSGT00940000162446 ENSGT00390000001561 #11 ENSGT00940000154098.a #12 ENSGT00390000008708 #13 ENSGT00500000045001 #14 ENSGT00940000157710 #15 ENSGT00940000154572 #17 ENSGT00600000084428.b #21 ENSGT00720000108833 #22 ENSGT00880000138031 #23 ENSGT00940000158187 #24 ENSGT00940000158037 #25 ENSGT00940000159389 #26 ENSGT00940000158600 #27 ENSGT00940000155166.A.b.b.b #28 ENSGT00940000155166.A.a #28 ENSGT00390000016813 #30 ENSGT00940000155118 #31 ENSGT00390000004003 ENSGT00390000004383 ENSGT00390000000068 ENSGT00950000182953.B.a ENSGT00390000017181 ENSGT00390000001566 Common wall lizard MODERN SPECIES 1 AMDHD1 (ENSPMRG00000010671) HAL (ENSPMRG00000010680) LTA4H (ENSPMRG00000010705) ELK3 (ENSPMRG00000010715) #7 CDK17 (ENSPMRG00000010799) #8 ENSPMRG00000011233 #9 ENSPMRG00000011242 #10 CFAP54 (ENSPMRG00000011254) NEDD1 (ENSPMRG00000011292) #11 ENSPMRG00000011315 #12 SLC25A3 (ENSPMRG00000011324) #13 IKBIP (ENSPMRG00000011348) #14 APAF1 (ENSPMRG00000011359) #15 ANKS1B (ENSPMRG00000011403) #17 BLTP3B (ENSPMRG00000011427) #21 ACTR6 (ENSPMRG00000011434) #22 SCYL2 (ENSPMRG00000011442) #23 SLC17A8 (ENSPMRG00000011455) #24 NR1H4 (ENSPMRG00000011463) #25 GAS2L3 (ENSPMRG00000011475) #26 ANO4 (ENSPMRG00000011481) #27 ENSPMRG00000011516 #28 ENSPMRG00000011526 #28 ENSPMRG00000011534 #28 UTP20 (ENSPMRG00000011556) #30 ARL1 (ENSPMRG00000011603) #31 NUP205 (ENSPMRG00000011620) POLR3H (ENSPMRG00000011848) CNOT4 (ENSPMRG00000011854) ENSPMRG00000011858 ENSPMRG00000011861 Argentine black and white tegu MODERN SPECIES 6 NTN4 (ENSSMRG00000011261) AMDHD1 (ENSSMRG00000011278) HAL (ENSSMRG00000011281) LTA4H (ENSSMRG00000011347) ELK3 (ENSSMRG00000011356) #7 CDK17 (ENSSMRG00000011361) #8 ENSSMRG00000011419 #9 ENSSMRG00000011423 ENSSMRG00000011458 #12 ENSSMRG00000011468 #13 IKBIP (ENSSMRG00000011475) #14 APAF1 (ENSSMRG00000011507) #15 ANKS1B (ENSSMRG00000013652) #17 ENSSMRG00000013656 #17 BLTP3B (ENSSMRG00000013657) #21 ACTR6 (ENSSMRG00000013660) #22 SCYL2 (ENSSMRG00000013663) #23 SLC17A8 (ENSSMRG00000013665) #24 NR1H4 (ENSSMRG00000013669) #25 GAS2L3 (ENSSMRG00000013671) #26 ANO4 (ENSSMRG00000013676) #27 ENSSMRG00000013682 #28 ENSSMRG00000013849 #28 UTP20 (ENSSMRG00000013863) #30 ARL1 (ENSSMRG00000014003) #31 NUP205 (ENSSMRG00000014005) POLR3H (ENSSMRG00000014008) CNOT4 (ENSSMRG00000014010) ENSSMRG00000014012 STRA8 (ENSSMRG00000014027) WDR91 (ENSSMRG00000014028) Toxicofera ANCESTRAL SPECIES 7 ENSGT00940000154818.a.b ENSGT00940000153110.B ENSGT00390000008645 ENSGT00390000009047.b ENSGT00940000156375 ENSGT00940000157129 #7 ENSGT00940000155834 #8 ENSGT00940000162970 #9 ENSGT00940000164439 ENSGT00940000154098.a #12 ENSGT00390000008708 #13 ENSGT00500000045001 #14 ENSGT00940000157710 #15 ENSGT00940000154572 #17 ENSGT00600000084428.b #21 ENSGT00720000108833 #22 ENSGT00880000138031 #23 ENSGT00940000158187 #24 ENSGT00940000158037 #25 ENSGT00940000159389 #26 ENSGT00940000158600 #27 ENSGT00940000155166.A.b.b #28 ENSGT00940000155166.A.a #28 ENSGT00940000155166.A.b.a #28 ENSGT00390000016813 #30 ENSGT00940000155118 #31 ENSGT00390000004003 ENSGT00390000004383 ENSGT00390000000068 ENSGT00950000182953.B.a ENSGT00390000017181 Elapidae ANCESTRAL SPECIES 6 ENSGT00940000154818.a.b ENSGT00940000153110.B ENSGT00390000008645 ENSGT00390000009047.b ENSGT00940000156375 ENSGT00940000157129.b #7 ENSGT00940000155834 #8 ENSGT00940000162970 #9 ENSGT00940000164439 ENSGT00940000154098.a #12 ENSGT00390000008708 #13 ENSGT00500000045001 #14 ENSGT00940000157710 #15 ENSGT00940000154572 #17 ENSGT00600000084428.b #21 ENSGT00720000108833 #22 ENSGT00880000138031 #23 ENSGT00940000158187 #24 ENSGT00940000158037 #25 ENSGT00940000159389 #26 ENSGT00940000158600 #27 ENSGT00940000155166.A.b.b #28 ENSGT00940000155166.A.b.a #28 ENSGT00390000016813 #30 ENSGT00940000155118 #31 ENSGT00390000004003 ENSGT00390000004383 ENSGT00390000000068.k ENSGT00950000182953.B.a ENSGT00390000017181 ENSGT00390000001566 Elapidae_a ANCESTRAL SPECIES 1 ENSGT00940000153110.B ENSGT00390000008645 ENSGT00390000009047.b.kb ENSGT00390000009047.b.jb ENSGT00940000156375 ENSGT00940000157129.b #7 ENSGT00940000155834 #8 ENSGT00940000162970 #9 ENSGT00940000164439 ENSGT00940000154098.a #12 ENSGT00390000008708 #13 ENSGT00500000045001 #14 ENSGT00940000157710.c #15 ENSGT00940000154572 #17 ENSGT00600000084428.b #21 ENSGT00720000108833 #22 ENSGT00880000138031 #23 ENSGT00940000158187 #24 ENSGT00940000158037 #25 ENSGT00940000159389 #26 ENSGT00940000158600 #27 ENSGT00940000155166.A.b.b #28 ENSGT00940000155166.A.b.a #28 ENSGT00390000016813 #30 ENSGT00940000155118 #31 ENSGT00390000004003 ENSGT00390000004383 ENSGT00390000000068.k ENSGT00950000182953.B.a ENSGT00390000017181 ENSGT00390000001566 Acanthophiinae ANCESTRAL SPECIES ENSGT00940000153110.B ENSGT00390000008645 ENSGT00390000009047.b.kb ENSGT00390000009047.b.jb ENSGT00940000156375 ENSGT00940000157129.b #7 ENSGT00940000155834 #8 ENSGT00940000162970 #9 ENSGT00940000164439 ENSGT00940000154098.a #12 ENSGT00390000008708 #13 ENSGT00500000045001 #14 ENSGT00940000157710.c #15 ENSGT00940000154572 #17 ENSGT00600000084428.b #21 ENSGT00720000108833 #22 ENSGT00880000138031 #23 ENSGT00940000158187 #24 ENSGT00940000158037 #25 ENSGT00940000159389 #26 ENSGT00940000158600 #27 ENSGT00940000155166.A.b.b #28 ENSGT00940000155166.A.b.a #28 ENSGT00390000016813 #30 ENSGT00940000155118 #31 ENSGT00390000004003 ENSGT00390000004383 ENSGT00390000000068.k ENSGT00950000182953.B.a ENSGT00390000017181 ENSGT00390000001566 Eastern brown snake MODERN SPECIES AMDHD1 (ENSPTXG00000002605) HAL (ENSPTXG00000002604) LTA4H (ENSPTXG00000002602) ELK3 (ENSPTXG00000002600) #7 CDK17 (ENSPTXG00000002418) #8 ENSPTXG00000002414 #9 ENSPTXG00000002413 ENSPTXG00000002408 #12 SLC25A3 (ENSPTXG00000002405) #13 ENSPTXG00000002403 #14 APAF1 (ENSPTXG00000002205) #15 ENSPTXG00000002195 #17 ENSPTXG00000002194 #17 ENSPTXG00000002193 #17 BLTP3B (ENSPTXG00000002189) #21 ACTR6 (ENSPTXG00000002188) #22 SCYL2 (ENSPTXG00000002187) #23 SLC17A8 (ENSPTXG00000002186) #24 NR1H4 (ENSPTXG00000001317) #25 GAS2L3 (ENSPTXG00000001145) #26 ANO4 (ENSPTXG00000001124) #27 ENSPTXG00000001113 #28 ENSPTXG00000001108 #28 UTP20 (ENSPTXG00000000980) #30 ARL1 (ENSPTXG00000000946) #31 NUP205 (ENSPTXG00000000931) POLR3H (ENSPTXG00000000926) CNOT4 (ENSPTXG00000000917) ENSPTXG00000000729 STRA8 (ENSPTXG00000000710) WDR91 (ENSPTXG00000000706) Mainland tiger snake MODERN SPECIES 6 HAL (ENSNSUG00000017049) LTA4H (ENSNSUG00000017050) ELK3 (ENSNSUG00000017051) #7 CDK17 (ENSNSUG00000017052) #8 ENSNSUG00000017053 #9 ENSNSUG00000017055 ENSNSUG00000017116 ENSNSUG00000017118 #12 SLC25A3 (ENSNSUG00000017119) #13 APAF1 (ENSNSUG00000017121) #15 ENSNSUG00000017255 #17 ENSNSUG00000017256 #17 ENSNSUG00000017257 #17 ENSNSUG00000017258 #21 ENSNSUG00000017259 #21 ACTR6 (ENSNSUG00000017261) #22 SCYL2 (ENSNSUG00000017268) #23 SLC17A8 (ENSNSUG00000000011) #24 NR1H4 (ENSNSUG00000000091) #25 GAS2L3 (ENSNSUG00000000318) #26 ANO4 (ENSNSUG00000000361) #27 ENSNSUG00000000771 #28 ENSNSUG00000000773 #28 ENSNSUG00000000777 #28 UTP20 (ENSNSUG00000000784) #30 ENSNSUG00000000796 #31 NUP205 (ENSNSUG00000000801) POLR3H (ENSNSUG00000003329) CNOT4 (ENSNSUG00000003330) ENSNSUG00000003335 STRA8 (ENSNSUG00000003336) Blue-lipped sea krait MODERN SPECIES 8407 ACTR6 (ENSLLTG00000010788) #22 Indian cobra MODERN SPECIES 6 LTA4H (ENSNNAG00000003968) ELK3 (ENSNNAG00000004018) #7 CDK17 (ENSNNAG00000004131) #8 ENSNNAG00000004779 #9 ENSNNAG00000004875 ENSNNAG00000004966 ENSNNAG00000004995 #12 SLC25A3 (ENSNNAG00000005036) #13 ENSNNAG00000005080 #14 IKBIP (ENSNNAG00000005091) #14 APAF1 (ENSNNAG00000005230) #15 ENSNNAG00000007376 #17 ENSNNAG00000007398 #17 ENSNNAG00000007416 #17 BLTP3B (ENSNNAG00000007447) #21 ACTR6 (ENSNNAG00000007574) #22 SCYL2 (ENSNNAG00000007673) #23 SLC17A8 (ENSNNAG00000008409) #24 NR1H4 (ENSNNAG00000008500) #25 GAS2L3 (ENSNNAG00000008691) #26 ANO4 (ENSNNAG00000008832) #27 ENSNNAG00000008998 #28 ENSNNAG00000009030 #28 ENSNNAG00000009121 #30 ARL1 (ENSNNAG00000009157) #31 NUP205 (ENSNNAG00000009561) ENSNNAG00000014769 CNOT4 (ENSNNAG00000014785) ENSNNAG00000014867 STRA8 (ENSNNAG00000014961) WDR91 (ENSNNAG00000015012) Lizard MODERN SPECIES 4 ELK3 (ENSACAG00000013618) #7 CDK17 (ENSACAG00000013452) #8 ENSACAG00000043446 ENSACAG00000013432 #9 ENSACAG00000013337 ENSACAG00000028953 ENSACAG00000037609 ENSACAG00000013272 #12 SLC25A3 (ENSACAG00000013232) #13 IKBIP (ENSACAG00000013225) #14 APAF1 (ENSACAG00000013012) #15 ENSACAG00000012892 #17 ENSACAG00000012813 #17 BLTP3B (ENSACAG00000012716) #21 ENSACAG00000042031 ACTR6 (ENSACAG00000012651) #22 SCYL2 (ENSACAG00000012521) #23 SLC17A8 (ENSACAG00000012416) #24 NR1H4 (ENSACAG00000012333) #25 GAS2L3 (ENSACAG00000043416) #26 ANO4 (ENSACAG00000012017) #27 ENSACAG00000012014 #28 ENSACAG00000011810 #28 UTP20 (ENSACAG00000011671) #30 ARL1 (ENSACAG00000011602) #31 NUP205 (ENSACAG00000011264) ENSACAG00000011213 CNOT4 (ENSACAG00000011154) ENSACAG00000042011 ENSACAG00000036483 ENSACAG00000041952 tuatara MODERN SPECIES 115 ACTR6 (ENSSPUG00000003969) #22 DEPDC4 (ENSSPUG00000004002) ENSSPUG00000004011 #23 ENSSPUG00000004022 #23 SLC17A8 (ENSSPUG00000004052) #24 NR1H4 (ENSSPUG00000004119) #25 GAS2L3 (ENSSPUG00000004171) #26 ANO4 (ENSSPUG00000004307) #27 SLC5A8 (ENSSPUG00000004422) #28 UTP20 (ENSSPUG00000004513) #30 ARL1 (ENSSPUG00000004578) #31 ENSSPUG00000004595 ENSSPUG00000004607 ENSSPUG00000004616 ENSSPUG00000004628 CNOT4 (ENSSPUG00000004677) Anura ANCESTRAL SPECIES ENSGT00550000074939 ENSGT00530000064262 ENSGT00940000156931 ENSGT00950000182950.A ENSGT00940000156168.C ENSGT00940000161256 ENSGT00940000164705 ENSGT00530000063371.C ENSGT00940000166081 ENSGT00940000158095 ENSGT00940000160001 ENSGT00940000160184 ENSGT00940000157710 #15 ENSGT00390000018647 ENSGT00940000157835 ENSGT00720000108833 #22 ENSGT00950000182976.a.a ENSGT00880000138031 #23 ENSGT00940000158187 #24 ENSGT00940000158037 #25 ENSGT00940000159389 #26 ENSGT00940000158600 #27 ENSGT00940000155166.A.h #28 ENSGT00940000155166.A.g #28 ENSGT00390000016813 #30 ENSGT00940000155118 #31 ENSGT00940000155067.a #32 ENSGT00940000158254 #33 ENSGT00950000183117.a.a #34 ENSGT00390000000062 #35 ENSGT00390000006747 #36 Frog MODERN SPECIES 3 nt5dc3 (ENSXETG00000005357) stab2 (ENSXETG00000005356) ascl1 (ENSXETG00000041303) th2 (ENSXETG00000047373) eral1 (ENSXETG00000019633) tdg (ENSXETG00000025927) glt8d2 (ENSXETG00000019636) dguok (ENSXETG00000045569) hcfc2 (ENSXETG00000019643) nfyb (ENSXETG00000019656) txnrd1 (ENSXETG00000019645) hesx1 (ENSXETG00000001882) ENSXETG00000047768 slc41a2 (ENSXETG00000001883) nopchap1 (ENSXETG00000001884) actr6 (ENSXETG00000001885) #22 aldh1l2 (ENSXETG00000001886) washc4 (ENSXETG00000001887) appl2 (ENSXETG00000001888) ENSXETG00000046901 ENSXETG00000044573 lta4h (ENSXETG00000001890) elk3 (ENSXETG00000001891) #7 cdk17 (ENSXETG00000001892) #8 ENSXETG00000049231 c12orf63 (ENSXETG00000045266) nedd1 (ENSXETG00000021683) ENSXETG00000034921 ENSXETG00000032908 tmpo (ENSXETG00000018759) #12 slc25a3 (ENSXETG00000018767) #13 Leishan spiny toad MODERN SPECIES 6 ENSLLEG00000010718 ENSLLEG00000010737 GFRA3 (ENSLLEG00000010807) CDC25C (ENSLLEG00000011008) ENSLLEG00000011266 ENSLLEG00000011507 FAM53C (ENSLLEG00000011559) ENSLLEG00000011651 KDM3B (ENSLLEG00000011842) REEP2 (ENSLLEG00000012153) EGR1 (ENSLLEG00000012227) APAF1 (ENSLLEG00000012306) #15 ENSLLEG00000012873 ENSLLEG00000012983 TCP11L2 (ENSLLEG00000013008) ACTR6 (ENSLLEG00000013168) #22 DEPDC4 (ENSLLEG00000013520) SCYL2 (ENSLLEG00000013606) #23 SLC17A8 (ENSLLEG00000013824) #24 NR1H4 (ENSLLEG00000013967) #25 GAS2L3 (ENSLLEG00000014031) #26 ANO4 (ENSLLEG00000014143) #27 ENSLLEG00000014952 #28 ENSLLEG00000015204 #28 UTP20 (ENSLLEG00000015630) #30 ENSLLEG00000016106 ARL1 (ENSLLEG00000016133) #31 ENSLLEG00000016253 SPIC (ENSLLEG00000016280) #32 MYBPC1 (ENSLLEG00000016437) #33 CHPT1 (ENSLLEG00000018242) #34 Coelacanth MODERN SPECIES 317 ENSLACG00000017806 NR1H4 (ENSLACG00000017655) #25 SLC17A8 (ENSLACG00000017547) #24 si:ch211-244b2.3 (ENSLACG00000017406) SCYL2 (ENSLACG00000017276) #23 DEPDC4 (ENSLACG00000017206) IKBIP (ENSLACG00000017173) #14 CKAP4 (ENSLACG00000017109) BLTP3B (ENSLACG00000016905) #21 ENSLACG00000016205 #17 ANKS1B (ENSLACG00000013945) #17 APAF1 (ENSLACG00000012823) #15 ENSLACG00000012417 ENSLACG00000012282 TCP11L2 (ENSLACG00000011812) ACTR6 (ENSLACG00000011582) #22 PPARA (ENSLACG00000010917) PKDREJ (ENSLACG00000010618) CDPF1 (ENSLACG00000010445) TTC38 (ENSLACG00000009672) CECR2 (ENSLACG00000007129) ENSLACG00000006319 atp6v1e1a (ENSLACG00000006037) MRPS35 (ENSLACG00000005753) ENSLACG00000004860 slc23a4 (ENSLACG00000001025) Actinopterygii ANCESTRAL SPECIES 44 ENSGT00940000161105 ENSGT00440000035348 ENSGT00390000004190 ENSGT00950000183017.b.b.a.a ENSGT00390000013715 ENSGT00940000156720 ENSGT00950000182973.a.c.b ENSGT00940000158466 ENSGT00500000045001 #14 ENSGT00390000015968 ENSGT00600000084428.b #21 ENSGT00940000154572 #17 ENSGT00940000157710 #15 ENSGT00390000018647 ENSGT00940000157835 ENSGT00720000108833 #22 ENSGT00950000182976.a.a ENSGT00880000138031 #23 ENSGT01000000214676 ENSGT00940000162483 ENSGT00950000182885.B ENSGT00950000182885.C.b ENSGT00940000159081 ENSGT00390000004984 ENSGT00390000006088 ENSGT00390000010777 ENSGT00390000014084 ENSGT01030000234578.B.a #37 ENSGT00390000006747 #36 ENSGT00950000183117.a.a #34 ENSGT00940000158254 #33 Reedfish MODERN SPECIES pawr (ENSECRG00000009402) syt1a (ENSECRG00000009372) nav3 (ENSECRG00000009243) ENSECRG00000009184 mcat (ENSECRG00000009176) ttll1 (ENSECRG00000009159) pacsin2 (ENSECRG00000009143) arfgap3 (ENSECRG00000009110) IKBIP (ENSECRG00000009093) #14 ENSECRG00000009080 uhrf1bp1l (ENSECRG00000009040) #21 anks1b (ENSECRG00000006208) #17 ENSECRG00000005984 apaf1 (ENSECRG00000005928) #15 tcp11l2 (ENSECRG00000005889) actr6 (ENSECRG00000005878) #22 DEPDC4 (ENSECRG00000005867) scyl2 (ENSECRG00000005840) #23 ENSECRG00000005812 ENSECRG00000005794 ASCL1 (ENSECRG00000005766) pah (ENSECRG00000005757) th2 (ENSECRG00000005740) igf1 (ENSECRG00000005729) pmch (ENSECRG00000005723) parpbp (ENSECRG00000005713) nup37 (ENSECRG00000005703) washc3 (ENSECRG00000005692) dram1 (ENSECRG00000005683) #37 gnptab (ENSECRG00000005649) #36 chpt1 (ENSECRG00000005630) #34 Neopterygii ANCESTRAL SPECIES 29 ENSGT00940000155486 ENSGT00940000158917 ENSGT00950000183146.a.a ENSGT00950000183017.b.b.a.a ENSGT00390000013715 ENSGT00940000156720 ENSGT00950000182973.a.c.b ENSGT00940000158466 ENSGT00500000045001 #14 ENSGT00390000015968 ENSGT00600000084428.b #21 ENSGT00940000154572 #17 ENSGT00940000157710 #15 ENSGT00390000018647 ENSGT00940000157835 ENSGT00720000108833 #22 ENSGT00950000182976.a.a ENSGT00880000138031 #23 ENSGT01000000214676 ENSGT00940000164581.A.a.a ENSGT00950000182885.B ENSGT00950000182885.C.b Spotted gar MODERN SPECIES 674 ergic2 (ENSLOCG00000015116) si:dkey-97m3.1 (ENSLOCG00000015119) ENSLOCG00000015122 mcat (ENSLOCG00000015128) ttll1 (ENSLOCG00000015129) pacsin2 (ENSLOCG00000015131) arfgap3 (ENSLOCG00000015134) IKBIP (ENSLOCG00000015136) #14 ENSLOCG00000017892 #14 CKAP4 (ENSLOCG00000015137) uhrf1bp1l (ENSLOCG00000015138) #21 anks1b (ENSLOCG00000015145) #17 apaf1 (ENSLOCG00000015153) #15 ENSLOCG00000015160 tcp11l2 (ENSLOCG00000015162) actr6 (ENSLOCG00000015163) #22 DEPDC4 (ENSLOCG00000015166) scyl2 (ENSLOCG00000015168) #23 si:ch211-244b2.4 (ENSLOCG00000015170) pah (ENSLOCG00000015172) washc3 (ENSLOCG00000015173) nup37 (ENSLOCG00000015176) parpbp (ENSLOCG00000015177) pmch (ENSLOCG00000015178) igf1 (ENSLOCG00000015180) dram1 (ENSLOCG00000015183) #37 gnptab (ENSLOCG00000015184) #36 chpt1 (ENSLOCG00000015186) #34 mybpc1 (ENSLOCG00000015188) #33 ENSLOCG00000017893 ##32 spic (ENSLOCG00000015193) #32 Osteoglossocephalai ANCESTRAL SPECIES 281 ENSGT00950000183017.b.b.a.a ENSGT00390000013715 ENSGT00940000156720 ENSGT00950000182973.a.c.b ENSGT00940000158466 ENSGT00500000045001 #14 ENSGT00390000015968 ENSGT00600000084428.b #21 ENSGT00940000154572 #17 ENSGT00940000157710 #15 ENSGT00390000018647 ENSGT00940000157835 ENSGT00720000108833 #22 ENSGT00950000182976.a.a ENSGT00880000138031 #23 ENSGT01000000214676 Osteoglossiformes ANCESTRAL SPECIES 224 ENSGT00950000183017.b.b.a.a ENSGT00390000013715 ENSGT00950000182973.a.c.b ENSGT00940000158466 ENSGT00500000045001 #14 ENSGT00600000084428.b #21 ENSGT00940000154572.c #17 ENSGT00940000157710 #15 ENSGT00390000018647 ENSGT00940000157835 ENSGT00720000108833 #22 ENSGT00950000182976.a.a ENSGT00880000138031 #23 ENSGT00940000164581.A.a.a ENSGT00940000166611 ENSGT00950000182885.B ENSGT00950000182885.C.b ENSGT00390000010777 ENSGT00390000006088 ENSGT00940000159081 ENSGT00530000064100 ENSGT00390000006349 ENSGT00950000183062.a.b.a.b ENSGT00950000182952.B.f ENSGT00940000163908 ENSGT00940000159117 P. kingsleyae MODERN SPECIES 158 uhrf1bp1l (ENSPKIG00000005505) #21 anks1b (ENSPKIG00000005619) #17 ENSPKIG00000005743 apaf1 (ENSPKIG00000005791) #15 ENSPKIG00000005922 tcp11l2 (ENSPKIG00000005943) actr6 (ENSPKIG00000005971) #22 ENSPKIG00000005995 scyl2 (ENSPKIG00000006047) #23 ascl1a (ENSPKIG00000006153) pah (ENSPKIG00000006179) th2 (ENSPKIG00000006229) nup37 (ENSPKIG00000006278) parpbp (ENSPKIG00000006315) igf1 (ENSPKIG00000006362) washc3 (ENSPKIG00000006403) dram1 (ENSPKIG00000006429) #37 gnptab (ENSPKIG00000006461) #36 chpt1 (ENSPKIG00000006521) #34 mybpc1 (ENSPKIG00000006680) #33 spic (ENSPKIG00000007092) #32 arl1 (ENSPKIG00000007118) #31 Asian bonytongue MODERN SPECIES 11 ENSSFOG00015000257 cbll1 (ENSSFOG00015000266) slc26a3.1 (ENSSFOG00015000298) slc26a4 (ENSSFOG00015000396) ENSSFOG00015000409 ENSSFOG00015026922 mcat (ENSSFOG00015000457) pacsin2 (ENSSFOG00015000469) arfgap3 (ENSSFOG00015000529) IKBIP (ENSSFOG00015000593) #14 uhrf1bp1l (ENSSFOG00015000671) #21 anks1b (ENSSFOG00015000686) #17 apaf1 (ENSSFOG00015000841) #15 ENSSFOG00015000863 tcp11l2 (ENSSFOG00015000867) actr6 (ENSSFOG00015000878) #22 ENSSFOG00015000921 scyl2 (ENSSFOG00015000976) #23 si:ch211-244b2.4 (ENSSFOG00015001068) ascl1a (ENSSFOG00015027323) pah (ENSSFOG00015001109) th2 (ENSSFOG00015001175) nup37 (ENSSFOG00015001235) parpbp (ENSSFOG00015001286) ENSSFOG00015001300 igf1 (ENSSFOG00015001317) washc3 (ENSSFOG00015025745) dram1 (ENSSFOG00015033198) #37 gnptab (ENSSFOG00015001407) #36 sycp3 (ENSSFOG00015001502) #35 chpt1 (ENSSFOG00015001512) #34 Clupeocephala ANCESTRAL SPECIES 446 ENSGT00720000108833 #22 ENSGT00390000000062 #35 ENSGT00940000158553.b.a ENSGT00390000001810.a ENSGT00940000164439 ENSGT00940000157398.i.b ENSGT00390000010463.b ENSGT00940000164795 Otomorpha ANCESTRAL SPECIES 278 ENSGT00720000108833 #22 ENSGT00390000000062 #35 ENSGT00940000158553.b.a ENSGT00390000001810.a ENSGT00940000164439 ENSGT00940000157398.i.b ENSGT00390000010463.b ENSGT00940000164795 ENSGT00390000018319.a.a.a.b.d.b ENSGT00940000158701.b ENSGT00390000009048.a.a.h ENSGT00940000155971.d.a.b ENSGT00940000159628.d ENSGT00940000156049.a ENSGT00950000182902.b.a.d.b.b.b ENSGT00940000164526.b Clupeiformes ANCESTRAL SPECIES 10 ENSGT00970000193560 ENSGT00940000156616.i ENSGT00940000158955 ENSGT01100000263518.B.b.a.b ENSGT00940000159657.d.g.b ENSGT00390000014270 ENSGT00940000160911 ENSGT00950000182952.B ENSGT00950000183062.a.b.a ENSGT00530000064100 ENSGT00940000165925 ENSGT00390000013899.a.b ENSGT00940000165883 ENSGT00950000182931.A.a.a ENSGT01030000234578.B.b.b ##37 ENSGT00720000108833 #22 ENSGT00390000000062 #35 ENSGT00950000183117.a.b.b ##34 ENSGT00940000153544.a.i.a ENSGT00390000007975.b.a ENSGT00940000158289.a.a ENSGT00940000163864 ENSGT00950000183017.b.b.a.b.b ENSGT00940000156676.c ENSGT00940000156872.d ENSGT00940000179808 ENSGT00390000005294.b ENSGT00940000171293 ENSGT00390000010711 ENSGT00970000197276 ENSGT00940000160607 Denticle herring MODERN SPECIES 8 zgc:136858 (ENSDCDG00000033153) ENSDCDG00000033151 ENSDCDG00000033149 ENSDCDG00000033148 ENSDCDG00000033146 CNOT4 (ENSDCDG00000033138) tmem178ba (ENSDCDG00000033136) KCNA1 (ENSDCDG00000033135) ENSDCDG00000033134 GRAMD4 (ENSDCDG00000033039) ENSDCDG00000032966 ENSDCDG00000032957 ENSDCDG00000031903 zgc:171459 (ENSDCDG00000031814) ENSDCDG00000031810 actr6 (ENSDCDG00000031789) #22 si:ch211-59o9.10 (ENSDCDG00000031779) nedd1 (ENSDCDG00000031766) sh3gl3b (ENSDCDG00000031762) cart2 (ENSDCDG00000031760) zgc:193812 (ENSDCDG00000031744) ENSDCDG00000031722 ENSDCDG00000031714 PPIP5K1 (ENSDCDG00000028850) ENSDCDG00000028755 ENSDCDG00000028752 hapln3 (ENSDCDG00000028749) mfge8b (ENSDCDG00000028169) abhd2b (ENSDCDG00000027985) rlbp1b (ENSDCDG00000027974) ENSDCDG00000027967 Atlantic herring MODERN SPECIES 19 ENSCHAG00000002049 ENSCHAG00000002073 CNOT4 (ENSCHAG00000002097) tmem178ba (ENSCHAG00000002185) KCNA1 (ENSCHAG00000002201) ENSCHAG00000002221 GRAMD4 (ENSCHAG00000002310) ENSCHAG00000004490 gtse1 (ENSCHAG00000006220) atp2b1b (ENSCHAG00000006419) ENSCHAG00000012164 ruvbl2 (ENSCHAG00000012194) faxdc2 (ENSCHAG00000012360) zgc:101783 (ENSCHAG00000012388) cbll1 (ENSCHAG00000012461) actr6 (ENSCHAG00000012469) #22 sycp3 (ENSCHAG00000012593) #35 si:ch211-59o9.10 (ENSCHAG00000012601) lyrm5b (ENSCHAG00000012612) nedd1 (ENSCHAG00000012636) sh3gl3b (ENSCHAG00000012714) ENSCHAG00000012739 ENSCHAG00000012775 zgc:193812 (ENSCHAG00000012792) cart2 (ENSCHAG00000012801) ENSCHAG00000012830 PPIP5K1 (ENSCHAG00000012889) ENSCHAG00000013341 hapln3 (ENSCHAG00000013424) mfge8b (ENSCHAG00000013443) abhd2b (ENSCHAG00000013808) Otophysi ANCESTRAL SPECIES 104 ENSGT01030000234588.b.b.b.a.a.b.a.b ENSGT00940000165644.e ENSGT00390000007427 ENSGT00390000000068.a.b ENSGT00390000015299.a.b.b.a.e ENSGT00940000158576.a.b ENSGT00940000164299.b.b ENSGT00390000010968.a ENSGT00940000159839.d.b ENSGT00510000047522 ENSGT00950000183004.a.b.b ENSGT00640000091774.a.c.b ENSGT00640000091774.a.c.a ENSGT00940000158686.d ENSGT00940000154189.B ENSGT00720000108833 #22 ENSGT00390000000062 #35 ENSGT00940000158553.b.a ENSGT00390000001810.a ENSGT00940000164439 ENSGT00940000157398.i.b ENSGT00390000010463.b ENSGT00940000164795 ENSGT00390000018319.a.a.a.b.d.b ENSGT00940000158701.b ENSGT00390000009048.a.a.h ENSGT00940000155971.d.a.b ENSGT00940000159628.d ENSGT00940000156049.a ENSGT00950000182902.b.a.d.b.b.b ENSGT00940000164526.b Characiphysae ANCESTRAL SPECIES 7 ENSGT00950000182926.a ENSGT01030000234588.b.b.b.a.a.b.a.a ENSGT01030000234588.b.b.b.a.b ENSGT01030000234588.b.b.b.a.a.b.a.b ENSGT00940000165644.e ENSGT00390000007427 ENSGT00390000000068.a.b ENSGT00390000015299.a.b.b.a.e ENSGT00940000158576.a.b ENSGT00940000164299.b.b ENSGT00390000010968.a ENSGT00940000159839.d.b ENSGT00640000091774.a.c.a ENSGT00940000158686.d ENSGT00940000154189.B ENSGT00720000108833 #22 ENSGT00390000000062 #35 ENSGT00940000158553.b.a ENSGT00390000001810.a ENSGT00940000164439 ENSGT00940000157398.i.b ENSGT00390000010463.b ENSGT00940000164795 ENSGT00390000018319.a.a.a.b.d.b ENSGT00940000158701.b ENSGT00390000009048.a.a.h ENSGT00940000155971.d.a.b ENSGT00940000159628.d ENSGT00940000156049.a ENSGT00950000182902.b.a.d.b.b.b ENSGT00940000164526.b Channel catfish MODERN SPECIES 27 csk (ENSIPUG00000005716) edc3 (ENSIPUG00000005695) kxd1 (ENSIPUG00000005659) ergic2 (ENSIPUG00000005608) MAGI2 (ENSIPUG00000005235) gnaia (ENSIPUG00000004369) CHRM2 (ENSIPUG00000004348) fbxl14a (ENSIPUG00000004339) PRR5 (ENSIPUG00000004285) rad52 (ENSIPUG00000004253) Wnk1 (ENSIPUG00000004191) erc1 (ENSIPUG00000004073) ENSIPUG00000004038 TMEM60 (ENSIPUG00000004033) gtse1 (ENSIPUG00000004005) actr6 (ENSIPUG00000003848) #22 sycp3 (ENSIPUG00000003821) #35 si:ch211-59o9.10 (ENSIPUG00000003802) nedd1 (ENSIPUG00000003753) sh3gl3 (ENSIPUG00000003694) ENSIPUG00000003664 c8h15orf40 (ENSIPUG00000003652) cartpt (ENSIPUG00000003642) ENSIPUG00000003573 ENSIPUG00000003478 ENSIPUG00000003438 hapln3 (ENSIPUG00000003421) Edil3 (ENSIPUG00000003390) abhd2b (ENSIPUG00000003365) RLBP1 (ENSIPUG00000003324) ENSIPUG00000003320 Characiphysae_b ANCESTRAL SPECIES 7 ENSGT00950000182926.a ENSGT01030000234588.b.b.b.a.a.b.a.a ENSGT01030000234588.b.b.b.a.b ENSGT01030000234588.b.b.b.a.a.b.a.b ENSGT00940000165644.e ENSGT00390000007427 ENSGT00390000000068.a.b ENSGT00390000015299.a.b.b.a.e ENSGT00940000158576.a.b ENSGT00940000164299.b.b ENSGT00390000010968.a ENSGT00940000159839.d.b ENSGT00640000091774.a.c.a ENSGT00940000158686.d ENSGT00940000154189.B ENSGT00720000108833 #22 ENSGT00390000000062 #35 ENSGT00940000158553.b.a ENSGT00390000001810.a ENSGT00940000164439 ENSGT00940000157398.i.b ENSGT00390000010463.b ENSGT00940000164795 ENSGT00390000018319.a.a.a.b.d.b ENSGT00940000158701.b ENSGT00390000009048.a.a.h ENSGT00940000155971.d.a.b ENSGT00940000159628.d ENSGT00940000156049.a ENSGT00950000182902.b.a.d.b.b.b ENSGT00940000164526.b Characoidei ANCESTRAL SPECIES 2 ENSGT01030000234588.b.b.b.a.b ENSGT01030000234588.b.b.b.a.a.b.a.b ENSGT00940000165644.e ENSGT00390000007427 ENSGT00390000000068.a.b ENSGT00390000015299.a.b.b.a.e ENSGT00940000158576.a.b ENSGT00940000164299.b.b ENSGT00390000010968.a ENSGT00940000159839.d.b ENSGT00950000183004.a.b.b ENSGT00640000091774.a.c.b ENSGT00640000091774.a.c.a ENSGT00940000158686.d ENSGT00940000154189.B ENSGT00720000108833 #22 ENSGT00390000000062 #35 ENSGT00940000158553.b.a ENSGT00390000001810.a ENSGT00940000164439 ENSGT00940000157398.i.b ENSGT00390000010463.b ENSGT00940000164795 ENSGT00390000018319.a.a.a.b.d.b ENSGT00940000158701.b ENSGT00390000009048.a.a.h ENSGT00940000155971.d.a.b ENSGT00940000159628.d ENSGT00940000156049.a ENSGT00950000182902.b.a.d.b.b.b ENSGT00940000164526.b Mexicana tetra MODERN SPECIES 16 ENSAMXG00000001410 ENSAMXG00000001401 zgc:136858 (ENSAMXG00000001386) tmem178ba (ENSAMXG00000001358) CNOT4 (ENSAMXG00000001373) KCNA1 (ENSAMXG00000024909) ENSAMXG00000033288 ENSAMXG00000035147 GRAMD4 (ENSAMXG00000034463) ENSAMXG00000009342 ENSAMXG00000009402 zgc:101783 (ENSAMXG00000033552) zgc:171459 (ENSAMXG00000032912) atp2b1b (ENSAMXG00000009418) ENSAMXG00000009428 actr6 (ENSAMXG00000009440) #22 sycp3 (ENSAMXG00000009449) #35 lyrm5b (ENSAMXG00000024910) si:ch211-59o9.10 (ENSAMXG00000031339) nedd1 (ENSAMXG00000009459) sh3gl3b (ENSAMXG00000009473) ENSAMXG00000009485 zgc:193812 (ENSAMXG00000036518) cart2 (ENSAMXG00000032334) ENSAMXG00000029484 PPIP5K1 (ENSAMXG00000013519) ENSAMXG00000039144 ENSAMXG00000042874 hapln3 (ENSAMXG00000013617) mfge8b (ENSAMXG00000013623) abhd2b (ENSAMXG00000013636) Red-bellied piranha MODERN SPECIES 14 ENSPNAG00000020311 ENSPNAG00000005186 zgc:136858 (ENSPNAG00000020362) CNOT4 (ENSPNAG00000020433) tmem178ba (ENSPNAG00000020457) KCNA1 (ENSPNAG00000020478) ENSPNAG00000020490 GRAMD4 (ENSPNAG00000020639) ENSPNAG00000020670 zgc:101783 (ENSPNAG00000020851) ENSPNAG00000020874 zgc:113426 (ENSPNAG00000020885) zgc:171459 (ENSPNAG00000020891) atp2b1b (ENSPNAG00000005335) gtse1 (ENSPNAG00000021021) actr6 (ENSPNAG00000021050) #22 sycp3 (ENSPNAG00000021372) #35 si:ch211-59o9.10 (ENSPNAG00000021419) lyrm5b (ENSPNAG00000021436) nedd1 (ENSPNAG00000021510) sh3gl3b (ENSPNAG00000021567) ENSPNAG00000021683 zgc:193812 (ENSPNAG00000021711) cart2 (ENSPNAG00000021749) ENSPNAG00000022016 PPIP5K1 (ENSPNAG00000022113) ACAN (ENSPNAG00000022144) hapln3 (ENSPNAG00000022167) mfge8b (ENSPNAG00000003713) abhd2b (ENSPNAG00000022236) rlbp1b (ENSPNAG00000022288) Electric eel MODERN SPECIES 210 ENSEEEG00000021812 ENSEEEG00000021811 zgc:136858 (ENSEEEG00000021808) CNOT4 (ENSEEEG00000021750) tmem178ba (ENSEEEG00000021744) KCNA1 (ENSEEEG00000021742) ENSEEEG00000021741 GRAMD4 (ENSEEEG00000021680) ENSEEEG00000021676 ENSEEEG00000021646 ENSEEEG00000021640 zgc:101783 (ENSEEEG00000021638) zgc:171459 (ENSEEEG00000021636) ENSEEEG00000021632 gtse1 (ENSEEEG00000021630) actr6 (ENSEEEG00000021556) #22 sycp3 (ENSEEEG00000021546) #35 si:ch211-59o9.10 (ENSEEEG00000021545) nedd1 (ENSEEEG00000021542) sh3gl3b (ENSEEEG00000021537) ENSEEEG00000021536 zgc:193812 (ENSEEEG00000021534) cart2 (ENSEEEG00000021530) ENSEEEG00000021525 PPIP5K1 (ENSEEEG00000020153) ENSEEEG00000020121 ENSEEEG00000020105 hapln3 (ENSEEEG00000020104) mfge8b (ENSEEEG00000020044) abhd2b (ENSEEEG00000020037) Cyprinoidei ANCESTRAL SPECIES 53 ENSGT00390000007427 ENSGT00390000000068.a.b ENSGT00390000015299.a.b.b.a.e ENSGT00940000158576.a.b ENSGT00940000164299.b.b ENSGT00390000010968.a ENSGT00940000159839.d.b ENSGT00950000183004.a.b.b ENSGT00940000164201.c.b.a.e.b.a ENSGT00940000164201.c.b.a.e.a ENSGT00940000164201.c.b.b.b ENSGT00640000091774.a.c.b ENSGT00640000091774.a.c.a ENSGT00940000158686.d ENSGT00940000154189.B ENSGT00720000108833 #22 ENSGT00390000000062 #35 ENSGT00940000158553.b.a ENSGT00390000001810.a ENSGT00940000164439 ENSGT00940000157398.i.b ENSGT00390000010463.b ENSGT00940000164795 ENSGT00390000018319.a.a.a.b.d.b ENSGT00940000158701.b ENSGT00390000009048.a.a.h ENSGT00940000155971.d.a.b ENSGT00940000159628.d ENSGT00940000156049.a ENSGT00950000182902.b.a.d.b.b.b ENSGT00940000164526.b Cyprininae DUPLICATION Cyprininae ANCESTRAL SPECIES 152 ENSGT01030000234588.b.b.b.a.b ENSGT01030000234588.b.b.b.a.a.b.b.n.b ENSGT00390000007427.b ENSGT00390000000068.a.b.b ENSGT00390000015299.a.b.b.a.e.b ENSGT00940000158576.a.b.e ENSGT00940000164299.b.b ENSGT00390000010968.a.a ENSGT00940000159839.d.b.a ENSGT00510000047522.d.a ENSGT00950000183004.a.b.b.a ENSGT00640000091774.a.c.b.a ENSGT00640000091774.a.c.a.a ENSGT00940000158686.d.b ENSGT00940000154189.B.a ENSGT00720000108833.a #22 ENSGT00390000000062.l #35 ENSGT00940000158553.b.a.g ENSGT00940000164439.h ENSGT00940000157398.i.b.g ENSGT00390000010463.b.d ENSGT00390000018319.a.a.a.b.d.b.a.b ENSGT00940000158701.b.a ENSGT00390000009048.a.a.h.b ENSGT00940000155971.d.a.b.g.b ENSGT00940000159628.d.a ENSGT00940000156049.a.a ENSGT00950000182902.b.a.d.b.b.b.a.b ENSGT00940000164526.b.c ENSGT00940000160781.m.a Cyprininae_a ANCESTRAL SPECIES 46 ENSGT01030000234588.b.b.b.a.a.b.b.n.b ENSGT00390000007427.b ENSGT00390000000068.a.b.b ENSGT00390000015299.a.b.b.a.e.b ENSGT00940000158576.a.b.e ENSGT00940000164299.b.b ENSGT00390000010968.a.a ENSGT00940000159839.d.b.a ENSGT00510000047522.d.a ENSGT00950000183004.a.b.b.a ENSGT00940000164201.c.b.a.e.a.b ENSGT00640000091774.a.c.b.a ENSGT00640000091774.a.c.a.a ENSGT00940000158686.d.b ENSGT00940000154189.B.a ENSGT00720000108833.a #22 ENSGT00390000000062.l #35 ENSGT00940000158553.b.a.g ENSGT00390000001810.a ENSGT00940000164439.h ENSGT00940000157398.i.b.g ENSGT00390000010463.b.d ENSGT00390000018319.a.a.a.b.d.b.a.b ENSGT00940000158701.b.a ENSGT00390000009048.a.a.h.b ENSGT00940000155971.d.a.b.g.b ENSGT00940000159628.d.a ENSGT00940000156049.a.a ENSGT00950000182902.b.a.d.b.b.b.a.b ENSGT00940000164526.b.c ENSGT00940000160781.m.a Common carp reference MODERN SPECIES 33 tnni4b.2 (ENSCCRG00000038842) ENSCCRG00000072998 ENSCCRG00000038826 zgc:136858 (ENSCCRG00000038816) ENSCCRG00000038814 ENSCCRG00000065772 ENSCCRG00000076127 ENSCCRG00000006960 ENSCCRG00000000912 ENSCCRG00000071231 zgc:101783 (ENSCCRG00000014583) ENSCCRG00000053451 mxg (ENSCCRG00000045849) zgc:113426 (ENSCCRG00000015835) atp2b1b (ENSCCRG00000015848) actr6 (ENSCCRG00000015866) #22 si:ch211-59o9.10 (ENSCCRG00000015921) ENSCCRG00000064001 nedd1 (ENSCCRG00000015929) sh3gl3b (ENSCCRG00000015937) ENSCCRG00000065466 cart2 (ENSCCRG00000015954) ENSCCRG00000055594 ENSCCRG00000022225 ENSCCRG00000022233 hapln3 (ENSCCRG00000056368) mfge8b (ENSCCRG00000022295) abhd2b (ENSCCRG00000011317) rlbp1b (ENSCCRG00000011350) ENSCCRG00000061886 ENSCCRG00000063749 Golden-line barbel MODERN SPECIES 30 ENSSGRG00000049878 zgc:136858 (ENSSGRG00000049879) CNOT4 (ENSSGRG00000049881) tmem178ba (ENSSGRG00000049967) KCNA1 (ENSSGRG00000049969) kcna6a (ENSSGRG00000049971) GRAMD4 (ENSSGRG00000049972) ENSSGRG00000049973 ENSSGRG00000049974 zgc:101783 (ENSSGRG00000049975) mxg (ENSSGRG00000049977) zgc:113426 (ENSSGRG00000050035) zgc:171459 (ENSSGRG00000050037) atp2b1b (ENSSGRG00000050038) gtse1 (ENSSGRG00000050039) actr6 (ENSSGRG00000050041) #22 sycp3 (ENSSGRG00000050117) #35 si:ch211-59o9.10 (ENSSGRG00000050118) lyrm5b (ENSSGRG00000050119) nedd1 (ENSSGRG00000050120) nedd1 (ENSSGRG00000050122) ENSSGRG00000050126 cart2 (ENSSGRG00000050131) ENSSGRG00000050144 PPIP5K1 (ENSSGRG00000050149) ENSSGRG00000050168 ENSSGRG00000050171 ENSSGRG00000050175 hapln3 (ENSSGRG00000050183) mfge8b (ENSSGRG00000050185) rlbp1b (ENSSGRG00000050207) Goldfish MODERN SPECIES 45 tnni4b.2 (ENSCARG00000034173) ENSCARG00000034162 ENSCARG00000034142 CNOT4 (ENSCARG00000034017) tmem178ba (ENSCARG00000033995) KCNA1 (ENSCARG00000033987) kcna6a (ENSCARG00000033980) GRAMD4 (ENSCARG00000033635) ENSCARG00000030683 ENSCARG00000030579 zgc:101783 (ENSCARG00000030568) zgc:113426 (ENSCARG00000030557) zgc:171459 (ENSCARG00000030552) atp2b1b (ENSCARG00000030541) gtse1 (ENSCARG00000030510) actr6 (ENSCARG00000030303) #22 sycp3 (ENSCARG00000030275) #35 si:ch211-59o9.10 (ENSCARG00000030267) ENSCARG00000030262 nedd1 (ENSCARG00000030248) sh3gl3b (ENSCARG00000030236) ENSCARG00000030210 cart2 (ENSCARG00000030201) ENSCARG00000030183 ENSCARG00000029878 hapln3 (ENSCARG00000029871) mfge8b (ENSCARG00000029733) ENSCARG00000029724 abhd2b (ENSCARG00000029125) rlbp1b (ENSCARG00000029097) ENSCARG00000029083 Cyprininae ANCESTRAL SPECIES 197 ENSGT00390000000068.a.b.a ENSGT00390000015299.a.b.b.a.e.a ENSGT00940000158576.a.b.f ENSGT00940000158576.b ENSGT00390000010968.a.b ENSGT00940000159839.d.b.b ENSGT00510000047522.d.b ENSGT00950000183004.a.b.b.b ENSGT00940000164201.c.b.a.e.b.a ENSGT00940000164201.c.b.a.e.a ENSGT00940000164201.c.b.b.b ENSGT00640000091774.a.c.b.b ENSGT00640000091774.a.c.a.b ENSGT00940000158686.d.a ENSGT00940000154189.B.b ENSGT00720000108833.b #22 ENSGT00390000000062.k #35 ENSGT00940000158553.b.a.h ENSGT00390000001810.a ENSGT00940000164439.g ENSGT00940000157398.i.b.h ENSGT00390000010463.b.c ENSGT00940000164795 ENSGT00390000018319.a.a.a.b.d.b.a.a ENSGT00940000158701.b.b ENSGT00390000009048.a.a.h.a ENSGT00940000155971.d.a.b.h ENSGT00940000159628.d.b ENSGT00940000156049.a.b ENSGT00950000182902.b.a.d.b.b.b.a.a ENSGT00940000164526.b.d Goldfish MODERN SPECIES 17 ENSCARG00000012918 ENSCARG00000012881 zgc:101783 (ENSCARG00000012876) ENSCARG00000012871 ENSCARG00000012852 ENSCARG00000012847 ENSCARG00000012834 ENSCARG00000012829 ENSCARG00000012807 ENSCARG00000012786 ENSCARG00000012756 zgc:113426 (ENSCARG00000012738) zgc:171459 (ENSCARG00000012728) atp2b1b (ENSCARG00000012709) gtse1 (ENSCARG00000012672) actr6 (ENSCARG00000012688) #22 sycp3 (ENSCARG00000012665) #35 si:ch211-59o9.10 (ENSCARG00000012657) lyrm5b (ENSCARG00000012649) nedd1 (ENSCARG00000012647) sh3gl3b (ENSCARG00000012639) ENSCARG00000012620 zgc:193812 (ENSCARG00000012610) cart2 (ENSCARG00000012600) ENSCARG00000012593 PPIP5K1 (ENSCARG00000012567) ENSCARG00000012547 hapln3 (ENSCARG00000012530) mfge8b (ENSCARG00000012521) abhd2b (ENSCARG00000012354) rlbp1b (ENSCARG00000012325) Cyprininae_a ANCESTRAL SPECIES 16 ENSGT00940000158576.a.b.f ENSGT00940000158576.b ENSGT00390000010968.a.b ENSGT00940000159839.d.b.b ENSGT00510000047522.d.b ENSGT00950000183004.a.b.b.b ENSGT00940000161814.g.a.d.d.b ENSGT00940000164201.c.b.a.e.b.b.a.a ENSGT00940000164201.c.b.a.e.b.a ENSGT00940000164201.c.b.a.e.a.a ENSGT00940000164201.c.b.b.b ENSGT00640000091774.a.c.b.b ENSGT00640000091774.a.c.a.b ENSGT00940000158686.d.a ENSGT00940000154189.B.b ENSGT00720000108833.b #22 ENSGT00390000000062.k #35 ENSGT00940000158553.b.a.h ENSGT00940000164439.g ENSGT00940000157398.i.b.h ENSGT00390000010463.b.c ENSGT00940000164795 ENSGT00390000018319.a.a.a.b.d.b.a.a ENSGT00940000158701.b.b ENSGT00390000009048.a.a.h.a ENSGT00940000155971.d.a.b.h ENSGT00940000159628.d.b ENSGT00940000156049.a.b ENSGT00950000182902.b.a.d.b.b.b.a.a ENSGT00940000164526.b.d ENSGT00940000160781.m.b Common carp reference MODERN SPECIES 37 ENSCCRG00000060223 ENSCCRG00000014579 ENSCCRG00000059214 ENSCCRG00000015905 ENSCCRG00000073340 ENSCCRG00000000127 ENSCCRG00000058370 ENSCCRG00000061754 ENSCCRG00000060954 ENSCCRG00000064183 ENSCCRG00000024557 zgc:113426 (ENSCCRG00000024550) zgc:171459 (ENSCCRG00000043053) atp2b1b (ENSCCRG00000079688) gtse1 (ENSCCRG00000015854) actr6 (ENSCCRG00000043023) #22 si:ch211-59o9.10 (ENSCCRG00000043018) nedd1 (ENSCCRG00000042919) sh3gl3b (ENSCCRG00000024481) ENSCCRG00000080450 zgc:193812 (ENSCCRG00000015391) cart2 (ENSCCRG00000015387) ENSCCRG00000068721 ENSCCRG00000018832 ENSCCRG00000018477 hapln3 (ENSCCRG00000018476) mfge8b (ENSCCRG00000052410) abhd2b (ENSCCRG00000030947) rlbp1b (ENSCCRG00000030962) ENSCCRG00000030963 ENSCCRG00000011805 Golden-line barbel MODERN SPECIES 132 kcna6a (ENSSGRG00000026857) ENSSGRG00000026858 ENSSGRG00000026860 ENSSGRG00000026862 ENSSGRG00000026864 zgc:101783 (ENSSGRG00000026865) ENSSGRG00000026868 ENSSGRG00000026869 ENSSGRG00000026885 ENSSGRG00000026886 ENSSGRG00000026887 ENSSGRG00000026889 zgc:113426 (ENSSGRG00000026994) zgc:171459 (ENSSGRG00000026995) atp2b1b (ENSSGRG00000027010) actr6 (ENSSGRG00000027674) #22 sycp3 (ENSSGRG00000027885) #35 nedd1 (ENSSGRG00000027888) sh3gl3b (ENSSGRG00000027889) ENSSGRG00000027929 zgc:193812 (ENSSGRG00000027932) cart2 (ENSSGRG00000027934) ENSSGRG00000027946 ENSSGRG00000027954 ENSSGRG00000027957 hapln3 (ENSSGRG00000027965) mfge8b (ENSSGRG00000027967) abhd2b (ENSSGRG00000028277) rlbp1b (ENSSGRG00000028378) ENSSGRG00000028382 ENSSGRG00000028390 Zebrafish MODERN SPECIES 17 zgc:136858 (ENSDARG00000070830) CNOT4 (ENSDARG00000007045) tmem178ba (ENSDARG00000004577) KCNA1 (ENSDARG00000062942) kcna6a (ENSDARG00000046014) GRAMD4 (ENSDARG00000045506) ENSDARG00000058259 zgc:101783 (ENSDARG00000045824) ENSDARG00000023369 mxg (ENSDARG00000008019) ENSDARG00000051795 zgc:113426 (ENSDARG00000051793) zgc:171459 (ENSDARG00000077248) atp2b1b (ENSDARG00000007788) gtse1 (ENSDARG00000013719) actr6 (ENSDARG00000021370) #22 sycp3 (ENSDARG00000013438) #35 si:ch211-59o9.10 (ENSDARG00000089967) lyrm5b (ENSDARG00000045827) nedd1 (ENSDARG00000013472) sh3gl3b (ENSDARG00000007302) zgc:193812 (ENSDARG00000097310) ENSDARG00000062781 cart2 (ENSDARG00000045832) ENSDARG00000022045 ENSDARG00000073909 ENSDARG00000045799 hapln3 (ENSDARG00000045802) ENSDARG00000112947 mfge8b (ENSDARG00000045803) abhd2b (ENSDARG00000045804) Euteleosteomorpha ANCESTRAL SPECIES 284 ENSGT00640000091774.a.a ENSGT00640000091774.a.b ENSGT00950000183004.a.b.b ENSGT00720000108833 #22 ENSGT00390000000062 #35 ENSGT00940000158553.b.a ENSGT00390000001810.a ENSGT00940000164439 ENSGT00940000157398.i.b ENSGT00390000010463.b ENSGT00940000164795 ENSGT00530000063834.f ENSGT00390000018319.a.a.a.b.c ENSGT00390000006548.a.b.b Acanthomorphata ANCESTRAL SPECIES 217 ENSGT00940000162591 ENSGT00390000016223 ENSGT00940000160394.b ENSGT00390000007640.b.b ENSGT00940000156152.e.a.b ENSGT00940000156124.c.b ENSGT00940000159837 ENSGT00730000111696.b ENSGT00990000203615.a.a.a.a ENSGT00640000091774.a.a ENSGT00640000091774.a.b ENSGT00950000183004.a.b.b ENSGT00720000108833 #22 ENSGT00390000000062 #35 ENSGT00940000158553.b.a ENSGT00390000001810.a ENSGT00940000164439 ENSGT00940000157398.i.b Euacanthomorphacea ANCESTRAL SPECIES 39 ENSGT00390000009212 ENSGT00530000063759.a ENSGT00520000055620.B ENSGT00940000162591 ENSGT00390000016223 ENSGT00940000160394.b ENSGT00390000007640.b.b ENSGT00940000156152.e.a.b ENSGT00940000156124.c.b ENSGT00940000159837 ENSGT00730000111696.b ENSGT00990000203615.a.a.a.a ENSGT00640000091774.a.a ENSGT00640000091774.a.b ENSGT00950000183004.a.b.b ENSGT00720000108833 #22 ENSGT00390000000062 #35 ENSGT00940000158553.b.a ENSGT00390000001810.a ENSGT00940000164439 ENSGT00940000157398.i.b ENSGT01010000229167 Percomorphaceae ANCESTRAL SPECIES 31 ENSGT00530000063759.a ENSGT00520000055620.B ENSGT00940000162591 ENSGT00390000016223 ENSGT00940000160394.b ENSGT00390000007640.b.b ENSGT00940000156152.e.a.b ENSGT00940000156124.c.b ENSGT00940000159837 ENSGT00730000111696.b ENSGT00990000203615.a.a.a.a ENSGT00640000091774.a.a ENSGT00940000177432.a.a ENSGT00640000091774.a.b ENSGT00950000183004.a.b.b ENSGT00720000108833 #22 ENSGT00390000000062 #35 ENSGT00940000158553.b.a ENSGT00390000001810.a ENSGT00940000164439 ENSGT00510000048252 ENSGT00390000002251 ENSGT00390000006218 ENSGT00390000006548.a.b.b ENSGT00390000018319.a.a.a.b.c ENSGT00940000164795 ENSGT00390000010463.b ENSGT00530000063981.b ENSGT00940000159572.a.b ENSGT00390000008748.b.h ENSGT00940000164099.a.b Percomorphaceae_B ANCESTRAL SPECIES 5 ENSGT00520000055620.B ENSGT00940000162591 ENSGT00390000016223 ENSGT00940000160394.b ENSGT00390000007640.b.b ENSGT00940000156152.e.a.b ENSGT00940000156124.c.b ENSGT00940000176877 ENSGT00940000159837 ENSGT00730000111696.b ENSGT00990000203615.a.a.a.a ENSGT00640000091774.a.a ENSGT00940000177432.a.a ENSGT00640000091774.a.b ENSGT00950000183004.a.b.b ENSGT00720000108833 #22 ENSGT00390000000062 #35 ENSGT00990000204734 ENSGT00390000001810.a ENSGT00940000158553.b.a ENSGT00940000164439 ENSGT00510000048252 ENSGT00390000002251 ENSGT00390000006218 ENSGT01010000229167 ENSGT00940000157398.i.b ENSGT00390000006548.a.b.b ENSGT00390000018319.a.a.a.b.c ENSGT00940000164795 ENSGT00390000010463.b ENSGT00530000063981.b Ovalentaria ANCESTRAL SPECIES 7 ENSGT00980000201244 ENSGT00520000055620.B ENSGT00940000162591 ENSGT00390000016223 ENSGT00940000160394.b ENSGT00390000007640.b.b ENSGT00940000156152.e.a.b ENSGT00940000156124.c.b ENSGT00940000176877 ENSGT00940000159837 ENSGT00730000111696.b ENSGT00990000203615.a.a.a.a ENSGT00940000177432.a.a ENSGT00640000091774.a.b ENSGT00950000183004.a.b.b ENSGT00720000108833 #22 ENSGT00390000000062 #35 ENSGT00940000158553.b.a ENSGT00390000001810.a ENSGT00940000164439 ENSGT00510000048252 ENSGT00390000002251 ENSGT00390000006218 ENSGT00940000157398.i.b ENSGT00390000006548.a.b.b ENSGT00390000018319.a.a.a.b.c ENSGT00940000164795 ENSGT00950000182940.b.a.a.g.a ENSGT00940000154876.a.b.b ENSGT00940000154876.a.b.a ENSGT00390000004930 Ovalentaria_B ANCESTRAL SPECIES 3 ENSGT00940000159483.a.a ENSGT00520000055620.B ENSGT00940000162591 ENSGT00390000016223 ENSGT00940000160394.b ENSGT00390000007640.b.b ENSGT00940000156152.e.a.b ENSGT00940000156124.c.b ENSGT00940000176877 ENSGT00940000159837 ENSGT00730000111696.b ENSGT00990000203615.a.a.a.a ENSGT00940000177432.a.a ENSGT00640000091774.a.b ENSGT00950000183004.a.b.b ENSGT00720000108833 #22 ENSGT00390000000062 #35 ENSGT00940000158553.b.a ENSGT00390000001810.a ENSGT00940000164439 ENSGT00510000048252 ENSGT00390000002251 ENSGT00390000006218 ENSGT00940000157398.i.b ENSGT00390000006548.a.b.b ENSGT00390000018319.a.a.a.b.c ENSGT00940000164795 ENSGT00950000182940.b.a.a.g.a ENSGT00940000154876.a.b.b ENSGT00940000154876.a.b.a ENSGT00390000004930 Pomacentridae ANCESTRAL SPECIES 43 ENSGT00940000164439 ENSGT00390000001810.a ENSGT00940000158553.b.a ENSGT00390000016223 ENSGT00940000160394.b ENSGT00390000007640.b.b ENSGT00940000156152.e.a.b ENSGT00940000156124.c.b ENSGT00940000176877 ENSGT00940000159837 ENSGT00730000111696.b ENSGT00990000203615.a.a.a.a ENSGT00940000177432.a.a ENSGT00640000091774.a.b ENSGT00950000183004.a.b.b ENSGT00720000108833 #22 ENSGT00390000000062 #35 ENSGT00940000162591 ENSGT00520000055620.B Bicolor damselfish MODERN SPECIES 2579 ENSSPAG00000002876 actr6 (ENSSPAG00000002891) #22 sycp3 (ENSSPAG00000002939) #35 ENSSPAG00000003042 Pomacentridae_A ANCESTRAL SPECIES 56 ENSGT00510000048252 ENSGT00940000164439 ENSGT00390000001810.a ENSGT00940000158553.b.a ENSGT00390000016223 ENSGT00940000160394.b ENSGT00390000007640.b.b ENSGT00940000156152.e.a.b ENSGT00940000156124.c.b ENSGT00940000176877 ENSGT00940000159837 ENSGT00730000111696.b ENSGT00990000203615.a.a.a.a ENSGT00640000091774.a.b ENSGT00950000183004.a.b.b ENSGT00720000108833 #22 ENSGT00940000162591 ENSGT00520000055620.B ENSGT00950000183003.a.b ENSGT00940000159483.a.a ENSGT00940000163250.A.b ENSGT00950000183202.a.b Spiny chromis MODERN SPECIES 992 ENSAPOG00000008391 ENSAPOG00000008413 PRDM11 (ENSAPOG00000008441) ENSAPOG00000008446 ENSAPOG00000008478 ENSAPOG00000008489 ENSAPOG00000008499 actr6 (ENSAPOG00000008554) #22 Amphiprion ANCESTRAL SPECIES 73 ENSGT00510000048252 ENSGT00940000164439 ENSGT00390000001810.a ENSGT00940000158553.b.a ENSGT00390000016223 ENSGT00940000160394.b ENSGT00390000007640.b.b ENSGT00940000156152.e.a.b ENSGT00940000156124.c.b ENSGT00940000176877 ENSGT00940000159837 ENSGT00730000111696.b ENSGT00990000203615.a.a.a.a ENSGT00640000091774.a.b ENSGT00950000183004.a.b.b ENSGT00720000108833 #22 ENSGT00940000162591 ENSGT00520000055620.B ENSGT00940000159483.a.a ENSGT00940000163250.A.b ENSGT00950000183202.a.b.n Orange clownfish MODERN SPECIES 18 PCLAF (ENSAPEG00000002713) nedd1 (ENSAPEG00000002649) lyrm5b (ENSAPEG00000002631) si:ch211-59o9.10 (ENSAPEG00000002616) ambra1b (ENSAPEG00000002507) ENSAPEG00000002478 ENSAPEG00000002469 DGKZ (ENSAPEG00000002165) PHF21A (ENSAPEG00000001925) ENSAPEG00000001855 PRDM11 (ENSAPEG00000001799) ENSAPEG00000001763 ENSAPEG00000001731 ENSAPEG00000001655 ENSAPEG00000001598 actr6 (ENSAPEG00000001522) #22 ENSAPEG00000001514 sycp3 (ENSAPEG00000001494) #35 NOX5 (ENSAPEG00000001440) rpgrip1l (ENSAPEG00000000985) IRX5 (ENSAPEG00000000940) ENSAPEG00000000796 ENSAPEG00000000724 ENSAPEG00000000687 ENSAPEG00000000667 SNX20 (ENSAPEG00000000649) ENSAPEG00000000573 snrkb (ENSAPEG00000000540) ano10b (ENSAPEG00000000462) fa2h (ENSAPEG00000000423) ENSAPEG00000000408 Clown anemonefish DUPLICATION Clown anemonefish MODERN SPECIES 3461 ENSAOCG00000021748 actr6 (ENSAOCG00000021704) #22 ENSAOCG00000002495 slc29a1a (ENSAOCG00000021622) ENSAOCG00000021565 ENSAOCG00000021552 Clown anemonefish MODERN SPECIES 2980 actr6 (ENSAOCG00000023712) #22 ENSAOCG00000023722 sycp3 (ENSAOCG00000001735) #35 Cichlidae ANCESTRAL SPECIES 83 ENSGT00940000163250.A.b ENSGT00940000159483.a.a ENSGT00520000055620.B ENSGT00940000162591 ENSGT00390000016223 ENSGT00940000160394.b ENSGT00390000007640.b.b ENSGT00940000156152.e.a.b ENSGT00940000156124.c.b ENSGT00940000159837 ENSGT00730000111696.b ENSGT00990000203615.a.a.a.a ENSGT00940000177432.a.a ENSGT00640000091774.a.b ENSGT00950000183004.a.b.b ENSGT00720000108833 #22 ENSGT00390000002251 ENSGT00510000048252 ENSGT00940000164439 ENSGT00390000001810.a ENSGT00940000158553.b.a ENSGT00390000000062 #35 Midas cichlid MODERN SPECIES 225 RBL2 (ENSACIG00000018550) ENSACIG00000018591 IRX5 (ENSACIG00000018601) rpgrip1l (ENSACIG00000018623) NOX5 (ENSACIG00000018681) ambra1b (ENSACIG00000018702) ENSACIG00000018729 mdkb (ENSACIG00000018809) DGKZ (ENSACIG00000018820) PHF21A (ENSACIG00000018865) PRDM11 (ENSACIG00000018938) ENSACIG00000018954 ENSACIG00000018963 ENSACIG00000018975 ENSACIG00000018986 actr6 (ENSACIG00000019001) #22 FCSK (ENSACIG00000019023) ENSACIG00000019083 nedd1 (ENSACIG00000019095) znf277 (ENSACIG00000019164) ENSACIG00000019183 spg11 (ENSACIG00000019210) CIAO2A (ENSACIG00000019357) Pseudocrenilabrinae ANCESTRAL SPECIES 42 ENSGT00940000159483.a.a ENSGT00520000055620.B ENSGT00940000162591 ENSGT00390000016223 ENSGT00940000160394.b ENSGT00390000007640.b.b ENSGT00940000156152.e.a.b ENSGT00940000156124.c.b ENSGT00940000159837 ENSGT00730000111696.b ENSGT00990000203615.a.a.a.a ENSGT00940000177432.a.a ENSGT00640000091774.a.b ENSGT00950000183004.a.b.b ENSGT00720000108833 #22 ENSGT00390000002251 ENSGT00510000048252 ENSGT00940000164439 ENSGT00390000001810.a ENSGT00940000158553.b.a ENSGT00390000000062 #35 ENSGT00940000159572.a.b ENSGT00390000008748.b.h ENSGT00940000164099.a.b ENSGT00940000155465.j ENSGT00940000164138 ENSGT00940000157859.a.b ENSGT01030000234534.B.a.b.a.a ENSGT00390000017697.a ENSGT00390000016791 Nile tilapia MODERN SPECIES 19 ENSONIG00000033180 FCSK (ENSONIG00000010560) rpgrip1l (ENSONIG00000018233) NOX5 (ENSONIG00000018231) ambra1b (ENSONIG00000018229) ENSONIG00000018227 mdkb (ENSONIG00000018226) DGKZ (ENSONIG00000018220) PHF21A (ENSONIG00000018218) PRDM11 (ENSONIG00000024618) ENSONIG00000040079 ENSONIG00000018215 ENSONIG00000020618 ENSONIG00000018213 ENSONIG00000018207 actr6 (ENSONIG00000018203) #22 Pseudocrenilabrinae_A ANCESTRAL SPECIES 30 ENSGT00940000159100.h ENSGT00940000159483.a.a ENSGT00520000055620.B ENSGT00940000162591 ENSGT00390000016223 ENSGT00940000160394.b ENSGT00390000007640.b.b ENSGT00940000156152.e.a.b ENSGT00940000156124.c.b ENSGT00940000159837 ENSGT00730000111696.b ENSGT00990000203615.a.a.a.a ENSGT00940000177432.a.a ENSGT00640000091774.a.b ENSGT00950000183004.a.b.b ENSGT00720000108833 #22 ENSGT00390000002251 ENSGT00510000048252 ENSGT00940000164439 ENSGT00390000001810.a ENSGT00940000158553.b.a ENSGT00390000000062 #35 ENSGT00940000159572.a.b ENSGT00390000008748.b.h ENSGT00940000164099.a.b ENSGT00940000155465.j ENSGT00940000164138 ENSGT00940000157859.a.b ENSGT01030000234534.B.a.b.a.a ENSGT00390000017697.a ENSGT00390000016791 Haplochromini ANCESTRAL SPECIES 27 ENSGT00940000159100.h ENSGT00940000159483.a.a ENSGT00520000055620.B ENSGT00940000162591 ENSGT00390000016223 ENSGT00940000160394.b ENSGT00390000007640.b.b ENSGT00940000156152.e.a.b ENSGT00940000156124.c.b ENSGT00940000159837 ENSGT00730000111696.b ENSGT00990000203615.a.a.a.a ENSGT00940000177432.a.a ENSGT00640000091774.a.b ENSGT00950000183004.a.b.b ENSGT00720000108833 #22 ENSGT00390000002251 ENSGT00510000048252 ENSGT00940000164439 ENSGT00390000001810.a ENSGT00940000158553.b.a.e ENSGT00990000204734 ENSGT00940000158553.b.a.f ENSGT00390000000062 #35 ENSGT00940000159572.a.b ENSGT00390000008748.b.h ENSGT00940000164099.a.b ENSGT00940000155465.j ENSGT00940000164138 ENSGT00940000157859.a.b ENSGT01030000234534.B.a.b.a.a Burton s mouthbrooder MODERN SPECIES 483 CHST8 (ENSHBUG00000007065) ENSHBUG00000007055 ENSHBUG00000007034 rpgrip1l (ENSHBUG00000006943) NOX5 (ENSHBUG00000006926) ambra1b (ENSHBUG00000006893) ENSHBUG00000006849 mdkb (ENSHBUG00000000169) DGKZ (ENSHBUG00000006799) PHF21A (ENSHBUG00000006727) PRDM11 (ENSHBUG00000006714) ENSHBUG00000006689 ENSHBUG00000006678 ENSHBUG00000006654 ENSHBUG00000006614 actr6 (ENSHBUG00000006598) #22 FCSK (ENSHBUG00000006533) PCLAF (ENSHBUG00000006492) nedd1 (ENSHBUG00000006485) lyrm5b (ENSHBUG00000006476) ENSHBUG00000006462 ENSHBUG00000006447 sycp3 (ENSHBUG00000006443) #35 ENSHBUG00000006430 ENSHBUG00000006415 ENSHBUG00000006383 ITGA11 (ENSHBUG00000006362) ENSHBUG00000006349 CLN6 (ENSHBUG00000006344) CALML4 (ENSHBUG00000000801) ENSHBUG00000006294 Haplochromini_A ANCESTRAL SPECIES 25 ENSGT00940000159496.l ENSGT00940000159100.h ENSGT00520000055620.B.k.a ENSGT00940000162591 ENSGT00390000016223 ENSGT00940000160394.b ENSGT00390000007640.b.b ENSGT00940000156152.e.a.b ENSGT00940000156124.c.b ENSGT00940000159837 ENSGT00730000111696.b ENSGT00990000203615.a.a.a.a ENSGT00940000177432.a.a ENSGT00640000091774.a.b ENSGT00950000183004.a.b.b ENSGT00720000108833 #22 ENSGT00390000002251 ENSGT00510000048252 ENSGT00940000164439 ENSGT00390000001810.a ENSGT00940000158553.b.a.e ENSGT00990000204734.a ENSGT00390000000062 #35 ENSGT00940000159572.a.b ENSGT00390000008748.b.h ENSGT00940000164099.a.b ENSGT00940000155465.j ENSGT00940000164138 ENSGT00940000157859.a.b ENSGT01030000234534.B.a.b.a.a ENSGT00940000181996 Haplochromini_B ANCESTRAL SPECIES 67 ENSGT00940000159100.h ENSGT00950000183202.a.b ENSGT00520000055620.B.k.a ENSGT00940000162591 ENSGT00390000016223 ENSGT00940000160394.b ENSGT00390000007640.b.b ENSGT00940000156152.e.a.b ENSGT00940000156124.c.b ENSGT00940000159837 ENSGT00730000111696.b ENSGT00990000203615.a.a.a.a ENSGT00940000177432.a.a ENSGT00640000091774.a.b ENSGT00950000183004.a.b.b ENSGT00720000108833 #22 ENSGT00390000002251 ENSGT00510000048252 ENSGT00940000164439 ENSGT00390000001810.a ENSGT00940000158553.b.a.e ENSGT00990000204734.a ENSGT00390000000062 #35 ENSGT00940000159572.a.b ENSGT00390000008748.b.h ENSGT00940000164099.a.b ENSGT00940000155465.j ENSGT00940000164138 ENSGT00940000157859.a.b ENSGT01030000234534.B.a.b.a.a ENSGT00940000181996 Zebra mbuna MODERN SPECIES 1110 herpud1 (ENSMZEG00005002860) cetp (ENSMZEG00005002845) rpgrip1l (ENSMZEG00005002793) NOX5 (ENSMZEG00005002723) ambra1b (ENSMZEG00005002673) ENSMZEG00005002651 mdkb (ENSMZEG00005002642) DGKZ (ENSMZEG00005002561) PHF21A (ENSMZEG00005002519) PRDM11 (ENSMZEG00005002489) ENSMZEG00005002480 ENSMZEG00005002468 ENSMZEG00005002453 ENSMZEG00005002446 ENSMZEG00005002433 actr6 (ENSMZEG00005002411) #22 FCSK (ENSMZEG00005002399) PCLAF (ENSMZEG00005002394) nedd1 (ENSMZEG00005002377) lyrm5b (ENSMZEG00005002365) ENSMZEG00005002349 ENSMZEG00005002329 sycp3 (ENSMZEG00005002309) #35 ENSMZEG00005002289 ENSMZEG00005002266 ENSMZEG00005002250 ITGA11 (ENSMZEG00005002210) ENSMZEG00005002193 CLN6 (ENSMZEG00005001296) CALML4 (ENSMZEG00005001256) ENSMZEG00005001244 Eastern happy MODERN SPECIES 19 rpgrip1l (ENSACLG00000021843) NOX5 (ENSACLG00000021924) ambra1b (ENSACLG00000022006) ENSACLG00000022090 ENSACLG00000022189 mdkb (ENSACLG00000022271) DGKZ (ENSACLG00000022285) ENSACLG00000022387 PHF21A (ENSACLG00000022400) PRDM11 (ENSACLG00000022418) ENSACLG00000022430 ENSACLG00000022441 ENSACLG00000022469 ENSACLG00000022494 ENSACLG00000022504 actr6 (ENSACLG00000022517) #22 ENSACLG00000022567 FCSK (ENSACLG00000022626) PCLAF (ENSACLG00000022657) nedd1 (ENSACLG00000022669) lyrm5b (ENSACLG00000022704) ENSACLG00000022707 ENSACLG00000022721 sycp3 (ENSACLG00000022736) #35 ENSACLG00000022744 ENSACLG00000022808 ENSACLG00000022820 ENSACLG00000022826 ITGA11 (ENSACLG00000022852) ENSACLG00000022942 CLN6 (ENSACLG00000022955) P. nyererei MODERN SPECIES 449 ENSPNYG00000001845 IRX5 (ENSPNYG00000001801) rpgrip1l (ENSPNYG00000001728) NOX5 (ENSPNYG00000001666) ambra1b (ENSPNYG00000001588) ENSPNYG00000001568 mdkb (ENSPNYG00000001513) DGKZ (ENSPNYG00000001190) PHF21A (ENSPNYG00000001089) PRDM11 (ENSPNYG00000001057) ENSPNYG00000001046 ENSPNYG00000001020 ENSPNYG00000001005 ENSPNYG00000000974 ENSPNYG00000000936 actr6 (ENSPNYG00000000889) #22 FCSK (ENSPNYG00000000816) PCLAF (ENSPNYG00000000810) nedd1 (ENSPNYG00000023142) lyrm5b (ENSPNYG00000023136) ENSPNYG00000023131 sycp3 (ENSPNYG00000023119) #35 ENSPNYG00000023107 ENSPNYG00000023093 ENSPNYG00000023084 ITGA11 (ENSPNYG00000023074) ENSPNYG00000023067 CLN6 (ENSPNYG00000023044) CALML4 (ENSPNYG00000023026) ENSPNYG00000023015 ENSPNYG00000023010 Lyretail cichlid DUPLICATION Lyretail cichlid MODERN SPECIES 495 ENSNBRG00000004995 KCTD15 (ENSNBRG00000005041) CHST8 (ENSNBRG00000005074) ENSNBRG00000005138 ENSNBRG00000005162 IRX5 (ENSNBRG00000005222) ENSNBRG00000005307 NOX5 (ENSNBRG00000005323) ambra1b (ENSNBRG00000005362) mdkb (ENSNBRG00000005398) ENSNBRG00000005413 PRDM11 (ENSNBRG00000005434) ENSNBRG00000005448 ENSNBRG00000005463 ENSNBRG00000005484 actr6 (ENSNBRG00000005495) #22 FCSK (ENSNBRG00000005529) PCLAF (ENSNBRG00000005581) nedd1 (ENSNBRG00000005636) ENSNBRG00000005669 ENSNBRG00000005676 sycp3 (ENSNBRG00000005707) #35 Lyretail cichlid MODERN SPECIES 751 ENSNBRG00000023220 actr6 (ENSNBRG00000023232) #22 Atherinomorphae ANCESTRAL SPECIES 44 ENSGT00980000201244 ENSGT00520000055620.B ENSGT00940000162591 ENSGT00390000016223 ENSGT00940000160394.b ENSGT00390000007640.b.b ENSGT00940000156152.e.a.b ENSGT00940000156124.c.b ENSGT00940000164249.b.a.b.b ENSGT00940000159837 ENSGT00730000111696.b ENSGT00990000203615.a.a.a.a ENSGT00940000177432.a.a.b ENSGT00640000091774.a.b ENSGT00950000183004.a.b.b ENSGT00720000108833 #22 ENSGT00390000002251 ENSGT00510000048252 ENSGT00940000164439 ENSGT00390000001810.a ENSGT00940000158553.b.a ENSGT00390000000062 #35 ENSGT00390000006218 ENSGT00940000157398.i.b ENSGT00390000006548.a.b.b ENSGT00390000018319.a.a.a.b.c ENSGT00940000164795 ENSGT00950000182940.b.a.a.g.a ENSGT00940000154876.a.b.b ENSGT00940000154876.a.b.a ENSGT00390000004930 Cyprinodontiformes ANCESTRAL SPECIES 6 ENSGT00940000177432.a.a.b ENSGT00990000203615.a.a.a.a ENSGT00730000111696.b ENSGT00940000159837 ENSGT00940000164249.b.a.b.b ENSGT00940000156124.c.b ENSGT00940000156152.e.a.b ENSGT00390000007640.b.b ENSGT00940000160394.b ENSGT00390000016223 ENSGT00940000162591 ENSGT00520000055620.B ENSGT00940000159483.a.a ENSGT00940000163250.A.b ENSGT00940000175409 ENSGT00720000108833 #22 ENSGT00390000002251 ENSGT00510000048252 ENSGT00940000164439 ENSGT00390000001810.a ENSGT00940000158553.b.a ENSGT00390000000062 #35 ENSGT00390000006218 ENSGT00940000157398.i.b ENSGT00390000006548.a.b.b ENSGT00390000018319.a.a.a.b.c ENSGT00940000164795 ENSGT00950000182940.b.a.a.g.a ENSGT00940000154876.a.b.b ENSGT00940000154876.a.b.a ENSGT00390000004930 Aplocheiloidei ANCESTRAL SPECIES ENSGT00720000108833 #22 Mangrove rivulus MODERN SPECIES 1598 actr6 (ENSKMAG00000007769) #22 Turquoise killifish MODERN SPECIES 1622 ENSNFUG00015021703 PHF21A (ENSNFUG00015021710) ENSNFUG00015021729 CU181898.3 (ENSNFUG00015021766) ENSNFUG00015021960 ENSNFUG00015021962 MDKB (ENSNFUG00015021966) ambra1b (ENSNFUG00015021989) NOX5 (ENSNFUG00015022021) RPGRIP1L (ENSNFUG00015022052) ENSNFUG00015022079 ENSNFUG00015022089 RBL2 (ENSNFUG00015022104) ENSNFUG00015022154 ENSNFUG00015022160 actr6 (ENSNFUG00015022161) #22 KIAA0101 (ENSNFUG00015022169) nedd1 (ENSNFUG00015022171) Nfu_g_1_008559 (ENSNFUG00015022172) RPS17 (ENSNFUG00015022174) SH3GL3B (ENSNFUG00015022177) commd9 (ENSNFUG00015022178) SYCP3 (ENSNFUG00015022180) #35 OLA.7388 (ENSNFUG00015022186) MAPK8IP1 (ENSNFUG00015022188) si:ch211-212o1.2 (ENSNFUG00015022193) znf423 (ENSNFUG00015022199) Nfu_g_1_008338 (ENSNFUG00015022244) CNOT1 (ENSNFUG00015022269) N4BP1 (ENSNFUG00015022326) siah1 (ENSNFUG00015022333) Cyprinodontoidei ANCESTRAL SPECIES 47 ENSGT00950000183004.a.b.b ENSGT00640000091774.a.b ENSGT00940000177432.a.a.b ENSGT00990000203615.a.a.a.a ENSGT00730000111696.b ENSGT00940000159837 ENSGT00940000164249.b.a.b.b ENSGT00940000156124.c.b ENSGT00940000156152.e.a.b ENSGT00390000007640.b.b ENSGT00940000160394.b ENSGT00390000016223 ENSGT00940000162591 ENSGT00520000055620.B ENSGT00940000159483.a.a ENSGT00720000108833 #22 ENSGT00390000002251 ENSGT00510000048252 ENSGT00940000164439 ENSGT00390000001810.a ENSGT00940000158553.b.a ENSGT00390000000062 #35 ENSGT00390000006218 ENSGT00940000157398.i.b ENSGT00390000006548.a.b.b ENSGT00390000018319.a.a.a.b.c ENSGT00940000164795 ENSGT00950000182940.b.a.a.g.a ENSGT00940000154876.a.b.b ENSGT00940000154876.a.b.a ENSGT00390000004930 Poeciliinae ANCESTRAL SPECIES 3 ENSGT01100000263483.E.a.c.b.b.c.a.a.b.b ENSGT00950000183004.a.b.b ENSGT00640000091774.a.b ENSGT00990000203615.a.a.a.a ENSGT00730000111696.b ENSGT00940000159837 ENSGT00940000164249.b.a.b.b ENSGT00940000156124.c.b ENSGT00940000156152.e.a.b ENSGT00390000007640.b.b ENSGT00940000160394.b ENSGT00390000016223 ENSGT00940000162591 ENSGT00520000055620.B ENSGT00940000159483.a.a ENSGT00720000108833 #22 ENSGT00390000002251 ENSGT00510000048252 ENSGT00940000164439 ENSGT00390000001810.a ENSGT00940000158553.b.a ENSGT00390000000062 #35 ENSGT00390000006218 ENSGT00940000157398.i.b ENSGT00390000006548.a.b.b ENSGT00390000018319.a.a.a.b.c ENSGT00940000164795 ENSGT00950000182940.b.a.a.g.a ENSGT00940000154876.a.b.b ENSGT00940000154876.a.b.a ENSGT00390000004930 Poecilia ANCESTRAL SPECIES 39 ENSGT01100000263483.E.a.c.b.b.c.a.a.b.b ENSGT00950000183004.a.b.b ENSGT00640000091774.a.b ENSGT00990000203615.a.a.a.a ENSGT00730000111696.b ENSGT00940000159837 ENSGT00940000164249.b.a.b.b ENSGT00940000156124.c.b ENSGT00940000156152.e.a.b ENSGT00390000007640.b.b ENSGT00940000160394.b ENSGT00390000016223 ENSGT00940000162591 ENSGT00520000055620.B ENSGT00940000159483.a.a ENSGT00720000108833 #22 ENSGT00390000002251 ENSGT00510000048252 ENSGT00940000164439 ENSGT00390000001810.a.b ENSGT00940000158553.b.a ENSGT00390000000062 #35 ENSGT00390000006218 ENSGT00940000157398.i.b ENSGT00390000006548.a.b.b ENSGT00390000018319.a.a.a.b.c ENSGT00940000164795 ENSGT00950000182940.b.a.a.g.a ENSGT00940000154876.a.b.b ENSGT00940000154876.a.b.a ENSGT00390000004930 NAME_6 ANCESTRAL SPECIES 29 ENSGT01100000263483.E.a.c.b.b.c.a.a.b.b ENSGT00950000183004.a.b.b ENSGT00640000091774.a.b ENSGT00990000203615.a.a.a.a ENSGT00730000111696.b ENSGT00940000159837 ENSGT00940000164249.b.a.b.b ENSGT00940000156124.c.b ENSGT00940000156152.e.a.b ENSGT00390000007640.b.b ENSGT00940000160394.b ENSGT00390000016223 ENSGT00940000162591 ENSGT00520000055620.B ENSGT00940000159483.a.a ENSGT00720000108833 #22 ENSGT00390000002251 ENSGT00510000048252 ENSGT00940000164439 ENSGT00390000001810.a.a ENSGT00390000001810.a.b ENSGT00940000158553.b.a ENSGT00390000000062 #35 ENSGT00390000006218 ENSGT00940000157398.i.b ENSGT00390000006548.a.b.b ENSGT00390000018319.a.a.a.b.c ENSGT00940000164795 ENSGT00950000182940.b.a.a.g.a ENSGT00940000154876.a.b.b ENSGT00940000154876.a.b.a Sailfin molly MODERN SPECIES 713 mdkb (ENSPLAG00000002583) ENSPLAG00000002579 ambra1b (ENSPLAG00000002570) NOX5 (ENSPLAG00000002525) rpgrip1l (ENSPLAG00000002499) IRX5 (ENSPLAG00000002470) RBL2 (ENSPLAG00000002411) actr6 (ENSPLAG00000002376) #22 FCSK (ENSPLAG00000002347) nedd1 (ENSPLAG00000002323) PCLAF (ENSPLAG00000002287) lyrm5b (ENSPLAG00000002280) Amazon molly MODERN SPECIES 459 ENSPFOG00000012188 ENSPFOG00000012260 ENSPFOG00000012265 ENSPFOG00000012303 PRDM11 (ENSPFOG00000012305) PHF21A (ENSPFOG00000012323) DGKZ (ENSPFOG00000012412) mdkb (ENSPFOG00000012737) ENSPFOG00000012741 ambra1b (ENSPFOG00000012748) NOX5 (ENSPFOG00000012976) rpgrip1l (ENSPFOG00000013083) ENSPFOG00000023663 IRX5 (ENSPFOG00000013162) ENSPFOG00000013187 actr6 (ENSPFOG00000013412) #22 FCSK (ENSPFOG00000013529) PCLAF (ENSPFOG00000013814) nedd1 (ENSPFOG00000013843) si:ch211-59o9.10 (ENSPFOG00000013904) lyrm5b (ENSPFOG00000022849) lyrm5b (ENSPFOG00000013895) sycp3 (ENSPFOG00000013912) #35 commd9 (ENSPFOG00000013964) sh3gl3b (ENSPFOG00000013975) zgc:114188 (ENSPFOG00000014035) cart2 (ENSPFOG00000014040) ENSPFOG00000014042 ENSPFOG00000014055 ANPEP (ENSPFOG00000014266) anpepb.1 (ENSPFOG00000014311) Guppy MODERN SPECIES 458 chmp1a (ENSPREG00000020973) ENSPREG00000020927 ENSPREG00000020917 ENSPREG00000020907 ENSPREG00000020901 PRDM11 (ENSPREG00000020891) PHF21A (ENSPREG00000020836) DGKZ (ENSPREG00000020808) mdkb (ENSPREG00000020797) ENSPREG00000020699 ambra1b (ENSPREG00000020660) NOX5 (ENSPREG00000020638) rpgrip1l (ENSPREG00000020613) IRX5 (ENSPREG00000020584) RBL2 (ENSPREG00000020409) actr6 (ENSPREG00000020359) #22 FCSK (ENSPREG00000020331) PCLAF (ENSPREG00000020303) nedd1 (ENSPREG00000020282) lyrm5b (ENSPREG00000020259) sycp3 (ENSPREG00000020246) #35 commd9 (ENSPREG00000020230) sh3gl3b (ENSPREG00000020218) zgc:114188 (ENSPREG00000020192) cart2 (ENSPREG00000020180) ENSPREG00000020158 ENSPREG00000020142 ANPEP (ENSPREG00000020078) anpepb.1 (ENSPREG00000020040) dnaaf4 (ENSPREG00000019982) DBX1 (ENSPREG00000019962) Platyfish MODERN SPECIES 11 ENSXMAG00000025922 ENSXMAG00000022198 ENSXMAG00000027525 ENSXMAG00000006897 ENSXMAG00000006895 PRDM11 (ENSXMAG00000006891) PHF21A (ENSXMAG00000006871) DGKZ (ENSXMAG00000006803) mdkb (ENSXMAG00000006797) ENSXMAG00000022606 ambra1b (ENSXMAG00000006779) NOX5 (ENSXMAG00000006758) rpgrip1l (ENSXMAG00000006728) IRX5 (ENSXMAG00000018551) RBL2 (ENSXMAG00000004674) actr6 (ENSXMAG00000009452) #22 ENSXMAG00000022305 FCSK (ENSXMAG00000006699) PCLAF (ENSXMAG00000006693) nedd1 (ENSXMAG00000006674) lyrm5b (ENSXMAG00000006672) si:ch211-59o9.10 (ENSXMAG00000006670) sycp3 (ENSXMAG00000006646) #35 commd9 (ENSXMAG00000006626) sh3gl3b (ENSXMAG00000006602) zgc:114188 (ENSXMAG00000006593) cart2 (ENSXMAG00000021655) ENSXMAG00000006586 ENSXMAG00000006549 ANPEP (ENSXMAG00000006541) anpepb.1 (ENSXMAG00000006489) NAME_4 ANCESTRAL SPECIES 30 ENSGT00640000091774.a.b ENSGT00940000177432.a.a.b ENSGT00990000203615.a.a.a.a ENSGT00730000111696.b ENSGT00940000159837 ENSGT00940000164249.b.a.b.b ENSGT00940000156124.c.b ENSGT00940000156152.e.a.b ENSGT00390000007640.b.b ENSGT00940000160394.b ENSGT00390000016223 ENSGT00940000162591 ENSGT00520000055620.B ENSGT00940000159483.a.a ENSGT00950000183202.a.b ENSGT00720000108833 #22 ENSGT00390000002251 ENSGT00510000048252 ENSGT00940000164439 ENSGT00390000001810.a ENSGT00990000204734 ENSGT00390000000062 #35 ENSGT00390000006218 ENSGT00940000157398.i.b ENSGT00390000006548.a.b.b ENSGT00390000018319.a.a.a.b.c ENSGT00940000164795 ENSGT00950000182940.b.a.a.g.a ENSGT00940000154876.a.b.b ENSGT00940000154876.a.b.a ENSGT00390000004930 Mummichog MODERN SPECIES 2241 ENSFHEG00000019244 ENSFHEG00000019213 ENSFHEG00000019186 ENSFHEG00000019167 PRDM11 (ENSFHEG00000019163) ENSFHEG00000019138 PHF21A (ENSFHEG00000019123) DGKZ (ENSFHEG00000019036) mdkb (ENSFHEG00000019005) ENSFHEG00000018976 ambra1b (ENSFHEG00000018969) NOX5 (ENSFHEG00000018900) rpgrip1l (ENSFHEG00000000487) IRX5 (ENSFHEG00000018641) RBL2 (ENSFHEG00000018632) actr6 (ENSFHEG00000018617) #22 FCSK (ENSFHEG00000018568) PCLAF (ENSFHEG00000018447) nedd1 (ENSFHEG00000018439) lyrm5b (ENSFHEG00000018432) ENSFHEG00000018424 sycp3 (ENSFHEG00000018403) #35 commd9 (ENSFHEG00000018398) sh3gl3b (ENSFHEG00000018367) zgc:114188 (ENSFHEG00000018360) cart2 (ENSFHEG00000000474) zgc:193812 (ENSFHEG00000000472) ENSFHEG00000018321 ANPEP (ENSFHEG00000018265) anpepb.1 (ENSFHEG00000018249) dnaaf4 (ENSFHEG00000018238) Sheepshead minnow DUPLICATION Sheepshead minnow MODERN SPECIES 1074 NOX5 (ENSCVAG00000019951) ENSCVAG00000019956 rpgrip1l (ENSCVAG00000020281) IRX5 (ENSCVAG00000020294) RBL2 (ENSCVAG00000020527) actr6 (ENSCVAG00000020544) #22 FCSK (ENSCVAG00000020549) PCLAF (ENSCVAG00000020648) Sheepshead minnow MODERN SPECIES 105 actr6 (ENSCVAG00000020897) #22 Oryzias ANCESTRAL SPECIES 35 ENSGT00530000064134.a.a ENSGT00940000163250.A.b ENSGT00940000159483.a.a ENSGT00980000201244 ENSGT00520000055620.B ENSGT00940000162591 ENSGT00390000016223 ENSGT00940000160394.b ENSGT00390000007640.b.b ENSGT00940000156152.e.a.b ENSGT00940000156124.c.b ENSGT00730000111696.b ENSGT00990000203615.a.a.a.a ENSGT00640000091774.a.b ENSGT00950000183004.a.b.b ENSGT00720000108833 #22 ENSGT00390000002251 ENSGT00510000048252 ENSGT00940000164439 ENSGT00390000001810.a ENSGT00940000174623 ENSGT00390000006218 ENSGT00390000006548.a.b.b ENSGT00390000018319.a.a.a.b.c ENSGT00390000012935 ENSGT00390000014757 ENSGT00950000183093.B.a.a ENSGT00390000004930 ENSGT00940000154876.a.b.a ENSGT00940000154876.a.b.b ENSGT00950000182940.b.a.a.g.a Oryzias_a ANCESTRAL SPECIES 1 ENSGT01050000246145 ENSGT00530000064134.a.a ENSGT00940000163250.A.b ENSGT00940000159483.a.a ENSGT00520000055620.B ENSGT00940000162591 ENSGT00390000016223 ENSGT00940000160394.b ENSGT00390000007640.b.b ENSGT00940000156152.e.a.b ENSGT00940000156124.c.b ENSGT00730000111696.b ENSGT00990000203615.a.a.a.a ENSGT00640000091774.a.b.c.a ENSGT00950000183004.a.b.b ENSGT00720000108833 #22 ENSGT00390000002251 ENSGT00510000048252 ENSGT00940000164439.e ENSGT00390000001810.a ENSGT00940000158553.b.a ENSGT00390000006218 ENSGT00390000006548.a.b.b ENSGT00390000018319.a.a.a.b.c ENSGT00390000012935 ENSGT00390000014757 ENSGT00950000183093.B.a.a ENSGT00390000004930 ENSGT00940000154876.a.b.a ENSGT00940000154876.a.b.b ENSGT00950000182940.b.a.a.g.a Japanese Medaka HdrR MODERN SPECIES 20 il17c (ENSORLG00000023466) ENSORLG00000029430 ENSORLG00000028664 ENSORLG00000028919 rpgrip1l (ENSORLG00000014081) NOX5 (ENSORLG00000014089) ambra1b (ENSORLG00000014123) ENSORLG00000014138 mdkb (ENSORLG00000014169) DGKZ (ENSORLG00000014238) PHF21A (ENSORLG00000014276) ENSORLG00000025402 ENSORLG00000014293 ENSORLG00000027002 ENSORLG00000027832 actr6 (ENSORLG00000014326) #22 FCSK (ENSORLG00000014336) PCLAF (ENSORLG00000014346) nedd1 (ENSORLG00000014380) lyrm5b (ENSORLG00000014387) si:ch211-59o9.10 (ENSORLG00000014392) commd9 (ENSORLG00000014404) zgc:114188 (ENSORLG00000026689) cart2 (ENSORLG00000014424) cstpp1 (ENSORLG00000014436) ckap5 (ENSORLG00000014504) ENSORLG00000023774 dnaaf4 (ENSORLG00000014547) anpepb.1 (ENSORLG00000014593) ENSORLG00000014604 ENSORLG00000014644 Chinese medaka MODERN SPECIES 421 ENSOSIG00000017842 ENSOSIG00000017836 IRX5 (ENSOSIG00000017828) ENSOSIG00000017823 rpgrip1l (ENSOSIG00000017818) NOX5 (ENSOSIG00000017810) ambra1b (ENSOSIG00000017804) ENSOSIG00000017797 mdkb (ENSOSIG00000017795) DGKZ (ENSOSIG00000017792) PHF21A (ENSOSIG00000017627) ENSOSIG00000017622 ENSOSIG00000017621 ENSOSIG00000017620 ENSOSIG00000017605 actr6 (ENSOSIG00000017599) #22 FCSK (ENSOSIG00000017425) ENSOSIG00000017390 nedd1 (ENSOSIG00000017358) ENSOSIG00000017348 commd9 (ENSOSIG00000017347) zgc:114188 (ENSOSIG00000017344) cart3 (ENSOSIG00000017343) cstpp1 (ENSOSIG00000017341) ckap5 (ENSOSIG00000015708) ENSOSIG00000014817 Oryzias_b ANCESTRAL SPECIES ENSGT00530000064134.a.a ENSGT00940000163250.A.b ENSGT00940000159483.a.a ENSGT00980000201244 ENSGT00520000055620.B ENSGT00940000162591 ENSGT00390000016223 ENSGT00940000160394.b ENSGT00390000007640.b.b ENSGT00940000156152.e.a.b ENSGT00940000156124.c.b ENSGT00730000111696.b ENSGT00990000203615.a.a.a.a ENSGT00640000091774.a.b ENSGT00950000183004.a.b.b ENSGT00720000108833 #22 ENSGT00390000002251 ENSGT00510000048252 ENSGT00940000164439 ENSGT00390000001810.a ENSGT00940000174623 ENSGT00390000006218 ENSGT00390000006548.a.b.b ENSGT00390000018319.a.a.a.b.c ENSGT00390000012935 ENSGT00390000014757 ENSGT00950000183093.B.a.a ENSGT00390000004930 ENSGT00940000154876.a.b.a ENSGT00940000154876.a.b.b ENSGT00950000182940.b.a.a.g.a Javanese ricefish MODERN SPECIES 20 zc3h18 (ENSOJAG00000011374) ENSOJAG00000011391 ENSOJAG00000011401 ENSOJAG00000011414 IRX5 (ENSOJAG00000011451) rpgrip1l (ENSOJAG00000011523) ambra1b (ENSOJAG00000011582) ENSOJAG00000011627 mdkb (ENSOJAG00000011708) DGKZ (ENSOJAG00000011775) PHF21A (ENSOJAG00000013172) ENSOJAG00000013258 ENSOJAG00000013267 ENSOJAG00000013281 ENSOJAG00000013325 actr6 (ENSOJAG00000013334) #22 FCSK (ENSOJAG00000013383) PCLAF (ENSOJAG00000013420) nedd1 (ENSOJAG00000013428) lyrm5b (ENSOJAG00000013446) ENSOJAG00000013461 ENSOJAG00000013468 commd9 (ENSOJAG00000013477) zgc:114188 (ENSOJAG00000013484) ENSOJAG00000013520 cstpp1 (ENSOJAG00000013533) DBX1 (ENSOJAG00000013901) dnaaf4 (ENSOJAG00000013916) anpepb.1 (ENSOJAG00000013970) ANPEP (ENSOJAG00000014425) ENSOJAG00000015279 Indian medaka DUPLICATION Indian medaka MODERN SPECIES 491 ENSOMEG00000007524 ENSOMEG00000007541 #22 Indian medaka MODERN SPECIES 15 ENSOMEG00000016317 ENSOMEG00000016331 IRX5 (ENSOMEG00000016355) ENSOMEG00000016388 rpgrip1l (ENSOMEG00000016490) NOX5 (ENSOMEG00000016523) ambra1b (ENSOMEG00000016619) ENSOMEG00000016654 mdkb (ENSOMEG00000016668) DGKZ (ENSOMEG00000016895) PHF21A (ENSOMEG00000016967) ENSOMEG00000016977 ENSOMEG00000016992 ENSOMEG00000017056 ENSOMEG00000017088 actr6 (ENSOMEG00000017107) #22 ENSOMEG00000017122 FCSK (ENSOMEG00000017194) PCLAF (ENSOMEG00000017224) nedd1 (ENSOMEG00000017252) lyrm5b (ENSOMEG00000017270) ENSOMEG00000017317 ENSOMEG00000017340 commd9 (ENSOMEG00000017360) zgc:114188 (ENSOMEG00000017396) cart2 (ENSOMEG00000017414) cstpp1 (ENSOMEG00000017441) ckap5 (ENSOMEG00000017514) DBX1 (ENSOMEG00000017547) dnaaf4 (ENSOMEG00000017571) anpepb.1 (ENSOMEG00000017648) Percomorphaceae_C ANCESTRAL SPECIES 5 ENSGT00520000055620.B ENSGT00940000162591 ENSGT00390000016223 ENSGT00940000160394.b ENSGT00390000007640.b.b ENSGT00940000156152.e.a.b ENSGT00940000156124.c.b ENSGT00940000176877 ENSGT00940000159837 ENSGT00730000111696.b ENSGT00990000203615.a.a.a.a ENSGT00640000091774.a.a ENSGT00940000177432.a.a ENSGT00640000091774.a.b ENSGT00950000183004.a.b.b ENSGT00720000108833 #22 ENSGT00390000000062 #35 ENSGT00990000204734 ENSGT00390000001810.a ENSGT00940000158553.b.a ENSGT00940000164439 ENSGT00510000048252 ENSGT00390000002251 ENSGT00390000006218 ENSGT01010000229167 ENSGT00940000157398.i.b ENSGT00390000006548.a.b.b ENSGT00390000018319.a.a.a.b.c ENSGT00940000164795 ENSGT00390000010463.b ENSGT00530000063981.b Eupercaria ANCESTRAL SPECIES 6 ENSGT00520000055620.B ENSGT00940000162591 ENSGT00390000016223 ENSGT00940000160394.b ENSGT00390000007640.b.b ENSGT00940000156152.e.a.b ENSGT00940000156124.c.b ENSGT00940000176877 ENSGT00940000159837 ENSGT00730000111696.b ENSGT00990000203615.a.a.a.a ENSGT00640000091774.a.a ENSGT00940000177432.a.a ENSGT00640000091774.a.b ENSGT00950000183004.a.b.b ENSGT00720000108833 #22 ENSGT00390000000062 #35 ENSGT00940000158553.b.a ENSGT00390000001810.a ENSGT00940000164439 ENSGT00510000048252 ENSGT00390000002251 ENSGT00390000006218 ENSGT01010000229167 ENSGT00940000157398.i.b ENSGT00390000006548.a.b.b ENSGT00390000018319.a.a.a.b.c ENSGT00940000164795 ENSGT00390000010463.b ENSGT00530000063981.b ENSGT00940000159572.a.b Tetraodontidae ANCESTRAL SPECIES 32 ENSGT00950000183202.a.b ENSGT00940000163250.A.b ENSGT00940000159483.a.a ENSGT00520000055620.B ENSGT00940000162591 ENSGT00390000016223 ENSGT00940000160394.b ENSGT00390000007640.b.b ENSGT00940000156152.e.a.b ENSGT00940000156124.c.b ENSGT00940000159837 ENSGT00730000111696.b ENSGT00990000203615.a.a.a.a ENSGT00950000183004.a.b.b ENSGT00720000108833 #22 ENSGT00390000000062 #35 ENSGT00940000164439 ENSGT00510000048252 ENSGT00390000002251 ENSGT00390000006218 ENSGT00940000157398.i.b ENSGT00390000006548.a.b.b ENSGT00390000018319.a.a.a.b.c ENSGT00390000010463.b ENSGT00530000063981.b ENSGT00940000159572.a.b ENSGT00390000008748.b.h ENSGT00940000164099.a.b ENSGT00940000155465.j ENSGT00940000164138 Tetraodon MODERN SPECIES 4 ENSTNIG00000013745 INSC (ENSTNIG00000013746) ENSTNIG00000013747 lamb1a (ENSTNIG00000013748) ENSTNIG00000013749 nup160 (ENSTNIG00000013750) ENSTNIG00000013751 ENSTNIG00000013752 mdkb (ENSTNIG00000013753) DGKZ (ENSTNIG00000013754) PHF21A (ENSTNIG00000013755) ENSTNIG00000002691 ENSTNIG00000002690 ENSTNIG00000002689 ENSTNIG00000002688 actr6 (ENSTNIG00000002687) #22 sycp3 (ENSTNIG00000002686) #35 nedd1 (ENSTNIG00000002685) PCLAF (ENSTNIG00000002684) FCSK (ENSTNIG00000002683) commd9 (ENSTNIG00000002682) sh3gl3b (ENSTNIG00000002681) zgc:114188 (ENSTNIG00000002680) cart2 (ENSTNIG00000001730) ENSTNIG00000002679 PRR5L (ENSTNIG00000002678) ENSTNIG00000002677 ENSTNIG00000002676 ENSTNIG00000002675 ENSTNIG00000002674 CALML4 (ENSTNIG00000002784) Fugu MODERN SPECIES 21 IRX5 (ENSTRUG00000012894) ENSTRUG00000031582 rpgrip1l (ENSTRUG00000012929) NOX5 (ENSTRUG00000013075) ambra1b (ENSTRUG00000013113) ENSTRUG00000013182 mdkb (ENSTRUG00000013268) DGKZ (ENSTRUG00000013299) PHF21A (ENSTRUG00000013593) PRDM11 (ENSTRUG00000025724) ENSTRUG00000029929 ENSTRUG00000028978 ENSTRUG00000022045 ENSTRUG00000013659 ENSTRUG00000032757 actr6 (ENSTRUG00000013801) #22 sycp3 (ENSTRUG00000013870) #35 nedd1 (ENSTRUG00000013932) PCLAF (ENSTRUG00000014009) FCSK (ENSTRUG00000014015) commd9 (ENSTRUG00000014104) sh3gl3b (ENSTRUG00000014107) zgc:114188 (ENSTRUG00000014186) cart2 (ENSTRUG00000013661) ENSTRUG00000024212 PRR5L (ENSTRUG00000014336) ENSTRUG00000032221 ENSTRUG00000014375 ENSTRUG00000014407 ENSTRUG00000025542 fem1b (ENSTRUG00000032479) Eupecaria_A ANCESTRAL SPECIES 7 ENSGT00520000055620.B ENSGT00940000162591 ENSGT00390000016223 ENSGT00940000160394.b ENSGT00390000007640.b.b ENSGT00940000156152.e.a.b ENSGT00940000156124.c.b ENSGT00940000176877 ENSGT00940000159837 ENSGT00730000111696.b ENSGT00990000203615.a.a.a.a ENSGT00640000091774.a.a ENSGT00940000177432.a.a ENSGT00640000091774.a.b ENSGT00950000183004.a.b.b ENSGT00720000108833 #22 ENSGT00390000000062 #35 ENSGT00940000158553.b.a ENSGT00390000001810.a ENSGT00940000164439 ENSGT00510000048252 ENSGT00390000002251 ENSGT00390000006218 ENSGT01010000229167 ENSGT00940000157398.i.b ENSGT00390000006548.a.b.b ENSGT00390000018319.a.a.a.b.c ENSGT00940000164795 ENSGT00390000010463.b ENSGT00530000063981.b ENSGT00940000159572.a.b Ballan wrasse MODERN SPECIES 318 rpgrip1l (ENSLBEG00000005179) NOX5 (ENSLBEG00000005119) ambra1b (ENSLBEG00000005034) ENSLBEG00000004993 mdkb (ENSLBEG00000004974) ENSLBEG00000004953 DGKZ (ENSLBEG00000004814) PHF21A (ENSLBEG00000004736) ENSLBEG00000004676 PRDM11 (ENSLBEG00000004656) ENSLBEG00000004634 ENSLBEG00000004591 ENSLBEG00000004548 ENSLBEG00000004515 ENSLBEG00000004483 actr6 (ENSLBEG00000004442) #22 sycp3 (ENSLBEG00000004398) #35 lyrm5b (ENSLBEG00000004379) si:ch211-59o9.10 (ENSLBEG00000004360) nedd1 (ENSLBEG00000004331) PCLAF (ENSLBEG00000004313) ENSLBEG00000004274 FCSK (ENSLBEG00000004235) COMMD9 (ENSLBEG00000004203) ENSLBEG00000004183 zgc:114188 (ENSLBEG00000004090) cart2 (ENSLBEG00000004068) zgc:193812 (ENSLBEG00000004054) ENSLBEG00000003973 ENSLBEG00000003929 ENSLBEG00000003894 Eupecaria_B ANCESTRAL SPECIES 7 ENSGT00520000055620.B ENSGT00940000162591 ENSGT00390000016223 ENSGT00940000160394.b ENSGT00390000007640.b.b ENSGT00940000156152.e.a.b ENSGT00940000156124.c.b ENSGT00940000176877 ENSGT00940000159837 ENSGT00730000111696.b ENSGT00990000203615.a.a.a.a ENSGT00640000091774.a.a ENSGT00940000177432.a.a ENSGT00640000091774.a.b ENSGT00950000183004.a.b.b ENSGT00720000108833 #22 ENSGT00390000000062 #35 ENSGT00940000158553.b.a ENSGT00390000001810.a ENSGT00940000164439 ENSGT00510000048252 ENSGT00390000002251 ENSGT00390000006218 ENSGT01010000229167 ENSGT00940000157398.i.b ENSGT00390000006548.a.b.b ENSGT00390000018319.a.a.a.b.c ENSGT00940000164795 ENSGT00390000010463.b ENSGT00530000063981.b ENSGT00940000159572.a.b Eupecaria_C ANCESTRAL SPECIES 6 ENSGT00980000201244 ENSGT00520000055620.B ENSGT00940000162591 ENSGT00390000016223 ENSGT00940000160394.b ENSGT00390000007640.b.b ENSGT00940000156152.e.a.b ENSGT00940000156124.c.b ENSGT00940000176877 ENSGT00940000159837 ENSGT00730000111696.b ENSGT00990000203615.a.a.a.a ENSGT00640000091774.a.a ENSGT00640000091774.a.b ENSGT00950000183004.a.b.b ENSGT00720000108833 #22 ENSGT00390000000062 #35 ENSGT00940000158553.b.a ENSGT00390000001810.a ENSGT00940000164439 ENSGT00510000048252 ENSGT00390000002251 ENSGT00390000006218 ENSGT00940000157398.i.b ENSGT00390000006548.a.b.b ENSGT00390000018319.a.a.a.b.c ENSGT00940000164795 ENSGT00390000010463.b ENSGT00530000063981.b ENSGT00940000159572.a.b ENSGT00390000008748.b.h Eupercaria_incertae_sedis ANCESTRAL SPECIES 4 ENSGT00940000159483.a.a ENSGT00980000201244 ENSGT00520000055620.B ENSGT00940000162591 ENSGT00390000016223 ENSGT00940000160394.b ENSGT00390000007640.b.b ENSGT00940000156152.e.a.b ENSGT00940000156124.c.b ENSGT00940000176877 ENSGT00940000159837 ENSGT00730000111696.b ENSGT00990000203615.a.a.a.a ENSGT00640000091774.a.b ENSGT00950000183004.a.b.b ENSGT00720000108833 #22 ENSGT00390000000062 #35 ENSGT00940000158553.b.a ENSGT00390000001810.a ENSGT00940000164439 ENSGT00510000048252 ENSGT00390000002251 ENSGT00390000006218 ENSGT00940000157398.i.b ENSGT00390000006548.a.b.b ENSGT00390000018319.a.a.a.b.c ENSGT00940000164795 ENSGT00390000010463.b ENSGT00530000063981.b ENSGT00940000159572.a.b ENSGT00390000008748.b.h Large yellow croaker MODERN SPECIES 39 ENSLCRG00005012879 mdkb (ENSLCRG00005012878) DGKZ (ENSLCRG00005011680) PHF21A (ENSLCRG00005011202) PRDM11 (ENSLCRG00005011195) cd59 (ENSLCRG00005011194) ENSLCRG00005011192 ENSLCRG00005011189 ENSLCRG00005011187 actr6 (ENSLCRG00005011113) #22 sycp3 (ENSLCRG00005011110) #35 ambra1b (ENSLCRG00005011107) NOX5 (ENSLCRG00005011101) rpgrip1l (ENSLCRG00005010979) ENSLCRG00005010971 ENSLCRG00005010961 RBL2 (ENSLCRG00005010934) hsd17b2 (ENSLCRG00005010924) mphosph6 (ENSLCRG00005010922) SNX20 (ENSLCRG00005010921) gpia (ENSLCRG00005010834) lsm14aa (ENSLCRG00005010826) ENSLCRG00005010823 KCTD15 (ENSLCRG00005010822) CHST8 (ENSLCRG00005010820) European seabass MODERN SPECIES 19 ENSDLAG00005030892 ENSDLAG00005029375 ENSDLAG00005003030 rpgrip1l (ENSDLAG00005017101) ENSDLAG00005015137 ENSDLAG00005031649 ambra1b (ENSDLAG00005016487) mdkb (ENSDLAG00005007027) DGKZ (ENSDLAG00005003086) PHF21A (ENSDLAG00005030997) ENSDLAG00005033058 ENSDLAG00005022125 ENSDLAG00005027356 ENSDLAG00005014226 ENSDLAG00005034703 ENSDLAG00005005445 #22 ENSDLAG00005005476 #35 si:ch211-59o9.10 (ENSDLAG00005034811) ENSDLAG00005014259 nedd1 (ENSDLAG00005005374) ENSDLAG00005005404 ENSDLAG00005032401 ENSDLAG00005030818 ENSDLAG00005030814 ENSDLAG00005017083 ENSDLAG00005026651 zgc:193812 (ENSDLAG00005016220) ENSDLAG00005016223 ENSDLAG00005034192 ENSDLAG00005013111 ENSDLAG00005013125 Gilthead seabream MODERN SPECIES 22 rpgrip1l (ENSSAUG00010000708) NOX5 (ENSSAUG00010000717) ambra1b (ENSSAUG00010000742) ENSSAUG00010000751 mdkb (ENSSAUG00010000755) DGKZ (ENSSAUG00010000773) ENSSAUG00010000845 PHF21A (ENSSAUG00010000865) ENSSAUG00010001040 PRDM11 (ENSSAUG00010001043) ENSSAUG00010001046 ENSSAUG00010001047 ENSSAUG00010001052 ENSSAUG00010001055 ENSSAUG00010001059 actr6 (ENSSAUG00010001068) #22 sycp3 (ENSSAUG00010001074) #35 si:ch211-59o9.10 (ENSSAUG00010001077) lyrm5b (ENSSAUG00010001079) nedd1 (ENSSAUG00010001082) PCLAF (ENSSAUG00010001088) FCSK (ENSSAUG00010001091) commd9 (ENSSAUG00010001102) ENSSAUG00010001112 ENSSAUG00010001123 zgc:114188 (ENSSAUG00010001125) ENSSAUG00010001133 zgc:193812 (ENSSAUG00010001135) ENSSAUG00010001141 ENSSAUG00010001146 ENSSAUG00010001149 Perciformes ANCESTRAL SPECIES 7 ENSGT00520000055620.B ENSGT00940000162591 ENSGT00390000016223 ENSGT00940000160394.b ENSGT00390000007640.b.b ENSGT00940000156152.e.a.b ENSGT00940000156124.c.b ENSGT00940000164249.b.a.b.b ENSGT00940000159837 ENSGT00730000111696.b ENSGT00990000203615.a.a.a.a ENSGT00640000091774.a.a ENSGT00940000177432.a.a ENSGT00640000091774.a.b ENSGT00950000183004.a.b.b ENSGT00720000108833 #22 ENSGT00390000000062 #35 ENSGT00940000158553.b.a ENSGT00390000001810.a ENSGT00940000164439 ENSGT00510000048252 ENSGT00390000002251 ENSGT00390000006218 ENSGT01010000229167 ENSGT00940000157398.i.b ENSGT00390000006548.a.b.b ENSGT00390000018319.a.a.a.b.c ENSGT00940000164795 ENSGT00530000063981.b ENSGT00940000159572.a.b ENSGT00390000008748.b.h Cottioidei ANCESTRAL SPECIES 37 ENSGT00530000063759.a ENSGT00940000159483.a.a ENSGT00520000055620.B ENSGT00940000162591 ENSGT00390000016223 ENSGT00940000160394.b ENSGT00390000007640.b.b ENSGT00940000156152.e.a.b ENSGT00940000156124.c.b ENSGT00940000159837 ENSGT00730000111696.b ENSGT00990000203615.a.a.a.a ENSGT00640000091774.a.a ENSGT00640000091774.a.b ENSGT00950000183004.a.b.b ENSGT00720000108833 #22 ENSGT00390000000062 #35 ENSGT00940000158553.b.a ENSGT00390000001810.a ENSGT00940000164439 ENSGT00510000048252 ENSGT00390000002251 ENSGT00390000006218 ENSGT00390000006548.a.b.b ENSGT00940000164795 ENSGT00530000063981.b ENSGT00940000159572.a.b ENSGT00390000008748.b.h ENSGT00940000164099.a.b ENSGT00940000155465.j ENSGT00940000164138 Lumpfish MODERN SPECIES 21 rpgrip1l (ENSCLMG00005022101) ENSCLMG00005022102 NOX5 (ENSCLMG00005000163) ambra1b (ENSCLMG00005000358) ENSCLMG00005000365 mdkb (ENSCLMG00005000367) ENSCLMG00005000368 DGKZ (ENSCLMG00005000500) PHF21A (ENSCLMG00005006087) PRDM11 (ENSCLMG00005006116) ENSCLMG00005006117 ENSCLMG00005006118 ENSCLMG00005006120 ENSCLMG00005006121 ENSCLMG00005006122 actr6 (ENSCLMG00005006124) #22 sycp3 (ENSCLMG00005006131) #35 si:ch211-59o9.10 (ENSCLMG00005006132) lyrm5b (ENSCLMG00005006133) nedd1 (ENSCLMG00005006135) PCLAF (ENSCLMG00005006139) commd9 (ENSCLMG00005006142) zgc:114188 (ENSCLMG00005006143) zgc:193812 (ENSCLMG00005006149) ENSCLMG00005006152 ENSCLMG00005006154 ENSCLMG00005006155 ENSCLMG00005006157 ENSCLMG00005006165 CLN6 (ENSCLMG00005006166) ENSCLMG00005006167 Stickleback MODERN SPECIES 14 gpia (ENSGACG00000007744) mphosph6 (ENSGACG00000007779) SNX20 (ENSGACG00000007786) ENSGACG00000007787 IRX5 (ENSGACG00000007829) NOX5 (ENSGACG00000007833) ambra1b (ENSGACG00000007844) ENSGACG00000007854 ENSGACG00000007858 ENSGACG00000007865 ENSGACG00000007866 ENSGACG00000007872 ENSGACG00000007891 PHF21A (ENSGACG00000007895) DGKZ (ENSGACG00000007902) actr6 (ENSGACG00000007919) #22 ENSGACG00000007952 nedd1 (ENSGACG00000007956) PCLAF (ENSGACG00000007967) FCSK (ENSGACG00000007976) zgc:114188 (ENSGACG00000007990) PRR5L (ENSGACG00000008007) GRAMD2A (ENSGACG00000008016) ENSGACG00000008022 ENSGACG00000008030 ENSGACG00000008044 ENSGACG00000008049 ciao2a (ENSGACG00000008052) spg11 (ENSGACG00000008057) znf277 (ENSGACG00000008086) immp2l (ENSGACG00000008130) Perciformes_a ANCESTRAL SPECIES 74 ENSGT00940000156124.c.b ENSGT00940000164249.b.a.b.b ENSGT00940000159837 ENSGT00730000111696.b ENSGT00990000203615.a.a.a.a ENSGT00640000091774.a.a ENSGT00940000177432.a.a ENSGT00640000091774.a.b ENSGT00950000183004.a.b.b ENSGT00720000108833 #22 ENSGT00390000000062 #35 ENSGT00940000158553.b.a ENSGT00390000001810.a ENSGT00940000164439 ENSGT00510000048252 ENSGT00390000002251 Pike perch MODERN SPECIES 275 PHF21A (ENSSLUG00000020630) ENSSLUG00000020641 PRDM11 (ENSSLUG00000020647) ENSSLUG00000020650 ENSSLUG00000020654 ENSSLUG00000020658 ENSSLUG00000020661 ENSSLUG00000020668 ENSSLUG00000020670 actr6 (ENSSLUG00000020678) #22 sycp3 (ENSSLUG00000020700) #35 ENSSLUG00000020702 ENSSLUG00000020705 lyrm5b (ENSSLUG00000020708) nedd1 (ENSSLUG00000020713) PCLAF (ENSSLUG00000020716) FCSK (ENSSLUG00000020735) Percomorphaceae_D ANCESTRAL SPECIES 5 ENSGT00940000159483.a.a ENSGT00520000055620.B ENSGT00940000162591 ENSGT00390000016223 ENSGT00940000160394.b ENSGT00390000007640.b.b ENSGT00940000156152.e.a.b ENSGT00940000156124.c.b ENSGT00940000176877 ENSGT00940000159837 ENSGT00730000111696.b ENSGT00990000203615.a.a.a.a ENSGT00640000091774.a.a ENSGT00640000091774.a.b ENSGT00950000183004.a.b.b ENSGT00720000108833 #22 ENSGT00390000000062 #35 ENSGT00940000158553.b.a ENSGT00390000001810.a ENSGT00940000164439 ENSGT00510000048252 ENSGT00390000002251 ENSGT00390000006218 ENSGT00940000157398.i.b ENSGT00390000006548.a.b.b ENSGT00390000018319.a.a.a.b.c ENSGT00940000164795 ENSGT00390000010463.b ENSGT00530000063981.b ENSGT00940000159572.a.b ENSGT00390000008748.b.h Carangaria ANCESTRAL SPECIES 6 ENSGT00940000159483.a.a ENSGT00520000055620.B ENSGT00940000162591 ENSGT00390000016223 ENSGT00940000160394.b ENSGT00390000007640.b.b ENSGT00940000156152.e.a.b ENSGT00940000156124.c.b ENSGT00940000164249.b.a.b.b ENSGT00940000159837 ENSGT00730000111696.b ENSGT00990000203615.a.a.a.a ENSGT00640000091774.a.a ENSGT00640000091774.a.b ENSGT00950000183004.a.b.b ENSGT00720000108833 #22 ENSGT00390000000062 #35 ENSGT00940000158553.b.a ENSGT00390000001810.a ENSGT00940000164439 ENSGT00510000048252 ENSGT00390000002251 ENSGT00390000006218 ENSGT00940000157398.i.b ENSGT00390000006548.a.b.b ENSGT00390000018319.a.a.a.b.c ENSGT00940000164795 ENSGT00390000010463.b ENSGT00530000063981.b ENSGT00940000159572.a.b ENSGT00390000008748.b.h Pleuronectoidei ANCESTRAL SPECIES ENSGT00940000159837 ENSGT00730000111696.b.d ENSGT00990000203615.a.a.a.a ENSGT00640000091774.a.a ENSGT00640000091774.a.b ENSGT00950000183004.a.b.b ENSGT00720000108833 #22 ENSGT00390000000062 #35 ENSGT00990000204734 ENSGT00390000001810.a ENSGT00940000164439 ENSGT00510000048252 ENSGT00390000002251 ENSGT00390000006218 ENSGT00390000006548.a.b.b ENSGT00390000018319.a.a.a.b.c ENSGT00940000164795 ENSGT00390000010463.b ENSGT00530000063981.b ENSGT00940000159572.a.b ENSGT00390000008748.b.h ENSGT00940000164099.a.b Tongue sole MODERN SPECIES 16 slc10a3 (ENSCSEG00000021806) chmp1a (ENSCSEG00000021805) cdk10 (ENSCSEG00000021804) vps4a (ENSCSEG00000021803) SNTB2 (ENSCSEG00000021802) spire2 (ENSCSEG00000021801) chst6 (ENSCSEG00000021800) chst6 (ENSCSEG00000021799) PRDM11 (ENSCSEG00000021798) ENSCSEG00000021797 ENSCSEG00000021796 ENSCSEG00000021795 ENSCSEG00000021794 ENSCSEG00000021793 ENSCSEG00000021792 actr6 (ENSCSEG00000021791) #22 sycp3 (ENSCSEG00000021790) #35 ENSCSEG00000021789 lyrm5b (ENSCSEG00000021788) nedd1 (ENSCSEG00000021787) PCLAF (ENSCSEG00000021786) FCSK (ENSCSEG00000021785) PRR5L (ENSCSEG00000021784) ENSCSEG00000021783 CALML4 (ENSCSEG00000021782) ENSCSEG00000021781 ENSCSEG00000021780 ENSCSEG00000021779 ENSCSEG00000021778 commd9 (ENSCSEG00000021777) zgc:114188 (ENSCSEG00000021774) Turbot MODERN SPECIES 1 ENSSMAG00000032605 ambra1b (ENSSMAG00000019264) ENSSMAG00000019136 ENSSMAG00000019083 ENSSMAG00000036853 ENSSMAG00000019069 ENSSMAG00000036455 ENSSMAG00000025609 ENSSMAG00000018983 ENSSMAG00000030267 ENSSMAG00000018927 ENSSMAG00000018919 ENSSMAG00000023542 ENSSMAG00000018878 ENSSMAG00000018845 ENSSMAG00000018810 #22 ENSSMAG00000018749 #35 ENSSMAG00000018680 ENSSMAG00000037101 ENSSMAG00000018585 ENSSMAG00000030786 ENSSMAG00000033887 ENSSMAG00000018544 ENSSMAG00000018479 ENSSMAG00000034286 ENSSMAG00000018443 ENSSMAG00000018431 ENSSMAG00000018426 ITGA11 (ENSSMAG00000018384) ENSSMAG00000018363 ENSSMAG00000018159 Carangaria_A ANCESTRAL SPECIES ENSGT00940000159483.a.a ENSGT00520000055620.B ENSGT00940000162591 ENSGT00390000016223 ENSGT00940000160394.b ENSGT00390000007640.b.b ENSGT00940000156152.e.a.b ENSGT00940000156124.c.b ENSGT00940000164249.b.a.b.b ENSGT00940000159837 ENSGT00730000111696.b ENSGT00990000203615.a.a.a.a ENSGT00640000091774.a.a ENSGT00640000091774.a.b ENSGT00950000183004.a.b.b ENSGT00720000108833 #22 ENSGT00390000000062 #35 ENSGT00940000158553.b.a ENSGT00390000001810.a ENSGT00940000164439 ENSGT00510000048252 ENSGT00390000002251 ENSGT00390000006218 ENSGT00940000157398.i.b ENSGT00390000006548.a.b.b ENSGT00390000018319.a.a.a.b.c ENSGT00940000164795 ENSGT00390000010463.b ENSGT00530000063981.b ENSGT00940000159572.a.b ENSGT00390000008748.b.h Barramundi perch MODERN SPECIES 31 mdkb (ENSLCAG00010000875) DGKZ (ENSLCAG00010000837) ENSLCAG00010000806 ENSLCAG00010000781 ENSLCAG00010000776 PRDM11 (ENSLCAG00010000770) ENSLCAG00010000768 ENSLCAG00010000765 ENSLCAG00010000692 actr6 (ENSLCAG00010000610) #22 sycp3 (ENSLCAG00010000570) #35 si:ch211-59o9.10 (ENSLCAG00010000556) lyrm5b (ENSLCAG00010000546) ftsj1 (ENSLCAG00010000530) brd1b (ENSLCAG00010000509) ENSLCAG00010000493 ENSLCAG00010000489 ENSLCAG00010000482 ENSLCAG00010000456 grm8b (ENSLCAG00010000405) pot1 (ENSLCAG00010000346) GPR37 (ENSLCAG00010000337) SPAM1 (ENSLCAG00010000329) ENSLCAG00010000320 HYAL4 (ENSLCAG00010000312) Seriola ANCESTRAL SPECIES 165 ENSGT00940000159837 ENSGT00730000111696.b.e ENSGT00990000203615.a.a.a.a ENSGT00640000091774.a.a ENSGT00640000091774.a.b ENSGT00950000183004.a.b.b ENSGT00720000108833 #22 ENSGT00390000000062 #35 ENSGT00940000158553.b.a ENSGT00390000001810.a ENSGT00940000164439 ENSGT00510000048252 Greater amberjack MODERN SPECIES 132 gpia (ENSSDUG00000000541) lsm14aa (ENSSDUG00000000495) ENSSDUG00000000429 kctd15a (ENSSDUG00000000401) CHST8 (ENSSDUG00000000397) tph2 (ENSSDUG00000000350) tbc1d15 (ENSSDUG00000000277) ZFC3H1 (ENSSDUG00000000244) PRDM11 (ENSSDUG00000000235) ENSSDUG00000000211 ENSSDUG00000000204 ENSSDUG00000000167 ENSSDUG00000000117 ENSSDUG00000000086 ENSSDUG00000021488 actr6 (ENSSDUG00000021467) #22 sycp3 (ENSSDUG00000021453) #35 si:ch211-59o9.10 (ENSSDUG00000021442) lyrm5b (ENSSDUG00000021436) nedd1 (ENSSDUG00000021390) PCLAF (ENSSDUG00000021380) Yellowtail amberjack MODERN SPECIES 2219 ENSSLDG00000004463 ENSSLDG00000004442 actr6 (ENSSLDG00000004379) #22 sycp3 (ENSSLDG00000004209) #35 lyrm5b (ENSSLDG00000004159) Anabantaria ANCESTRAL SPECIES 5 ENSGT00950000183202.a.b ENSGT00940000159483.a.a ENSGT00520000055620.B ENSGT00940000162591 ENSGT00390000016223 ENSGT00940000160394.b ENSGT00390000007640.b.b ENSGT00940000156152.e.a.b ENSGT00940000156124.c.b ENSGT00940000176877 ENSGT00940000159837 ENSGT00730000111696.b ENSGT00990000203615.a.a.a.a ENSGT00640000091774.a.b ENSGT00950000183004.a.b.b ENSGT00720000108833 #22 ENSGT00390000000062 #35 ENSGT00940000158553.b.a ENSGT00390000001810.a ENSGT00940000164439 ENSGT00510000048252 ENSGT00390000002251 ENSGT00390000006218 ENSGT00940000157398.i.b ENSGT00390000006548.a.b.b ENSGT00390000018319.a.a.a.b.c ENSGT00940000164795 ENSGT00390000010463.b ENSGT00530000063981.b ENSGT00940000159572.a.b ENSGT00390000008748.b.h Zig-zag eel MODERN SPECIES 20 ENSMAMG00000015799 ENSMAMG00000015781 rpgrip1l (ENSMAMG00000015755) ENSMAMG00000015722 ambra1b (ENSMAMG00000015652) ENSMAMG00000015636 mdkb (ENSMAMG00000015628) DGKZ (ENSMAMG00000015557) PHF21A (ENSMAMG00000015525) ENSMAMG00000027463 ENSMAMG00000015482 ENSMAMG00000024273 ENSMAMG00000015445 ENSMAMG00000015415 ENSMAMG00000015401 actr6 (ENSMAMG00000015332) #22 sycp3 (ENSMAMG00000015042) #35 lyrm5b (ENSMAMG00000014996) nedd1 (ENSMAMG00000014949) ENSMAMG00000014937 ENSMAMG00000014918 ENSMAMG00000014904 ENSMAMG00000014892 ENSMAMG00000014878 ENSMAMG00000014842 ENSMAMG00000014831 zgc:193812 (ENSMAMG00000014823) ENSMAMG00000014812 ENSMAMG00000028248 ENSMAMG00000014777 ENSMAMG00000014757 Anabantoidei ANCESTRAL SPECIES 5 ENSGT00940000155938.b.b ENSGT00950000183202.a.b ENSGT00940000159483.a.a ENSGT00520000055620.B ENSGT00940000162591 ENSGT00390000016223 ENSGT00940000160394.b ENSGT00390000007640.b.b ENSGT00940000156152.e.a.b ENSGT00940000156124.c.b ENSGT00940000159837 ENSGT00730000111696.b ENSGT00990000203615.a.a.a.a ENSGT00640000091774.a.b ENSGT00950000183004.a.b.b ENSGT00720000108833 #22 ENSGT00390000000062 #35 ENSGT00940000158553.b.a ENSGT00390000001810.a ENSGT00940000164439 ENSGT00510000048252 ENSGT00390000002251 ENSGT00390000006218 ENSGT00940000157398.i.b ENSGT00390000006548.a.b.b ENSGT00390000018319.a.a.a.b.c ENSGT00940000164795 ENSGT00390000010463.b ENSGT00530000063981.b ENSGT00940000159572.a.b ENSGT00390000008748.b.h Siamese fighting fish MODERN SPECIES 17 mphosph6 (ENSBSLG00000004687) SNX20 (ENSBSLG00000004685) IRX5 (ENSBSLG00000004615) ENSBSLG00000004613 rpgrip1l (ENSBSLG00000004609) ambra1b (ENSBSLG00000004581) ENSBSLG00000004573 mdkb (ENSBSLG00000004571) DGKZ (ENSBSLG00000004551) PHF21A (ENSBSLG00000004450) PRDM11 (ENSBSLG00000004419) ENSBSLG00000004415 ENSBSLG00000004413 ENSBSLG00000004410 ENSBSLG00000004341 actr6 (ENSBSLG00000004319) #22 sycp3 (ENSBSLG00000004303) #35 si:ch211-59o9.10 (ENSBSLG00000004296) nedd1 (ENSBSLG00000004290) PCLAF (ENSBSLG00000004286) FCSK (ENSBSLG00000004244) commd9 (ENSBSLG00000004237) ENSBSLG00000004214 zgc:114188 (ENSBSLG00000004175) ENSBSLG00000004160 zgc:193812 (ENSBSLG00000004152) ENSBSLG00000004145 PRR5L (ENSBSLG00000004026) ENSBSLG00000003987 ENSBSLG00000003971 ENSBSLG00000003958 Climbing perch MODERN SPECIES 19 ENSATEG00000013755 rpgrip1l (ENSATEG00000013724) ENSATEG00000013689 ambra1b (ENSATEG00000013668) ENSATEG00000013658 ENSATEG00000027168 mdkb (ENSATEG00000013643) DGKZ (ENSATEG00000013496) PHF21A (ENSATEG00000013406) ENSATEG00000013354 ENSATEG00000029658 ENSATEG00000013321 ENSATEG00000013296 ENSATEG00000013277 ENSATEG00000013263 actr6 (ENSATEG00000013224) #22 sycp3 (ENSATEG00000013194) #35 si:ch211-59o9.10 (ENSATEG00000027594) lyrm5b (ENSATEG00000013180) nedd1 (ENSATEG00000013081) ENSATEG00000013057 ENSATEG00000013012 ENSATEG00000027876 ENSATEG00000012744 ENSATEG00000012699 ENSATEG00000012691 zgc:193812 (ENSATEG00000027113) ENSATEG00000028003 ENSATEG00000025785 ENSATEG00000026005 ENSATEG00000012574 Tiger tail seahorse MODERN SPECIES 223 tph2 (ENSHCOG00000009042) tbc1d15 (ENSHCOG00000009059) ENSHCOG00000009144 ENSHCOG00000009159 frs2b (ENSHCOG00000009170) nup160 (ENSHCOG00000009178) ENSHCOG00000009212 ENSHCOG00000009227 gpia (ENSHCOG00000009272) mphosph6 (ENSHCOG00000009296) ENSHCOG00000009317 ENSHCOG00000009323 ENSHCOG00000009334 ENSHCOG00000009353 ENSHCOG00000009365 actr6 (ENSHCOG00000009404) #22 sycp3 (ENSHCOG00000009429) #35 si:ch211-59o9.10 (ENSHCOG00000009443) nedd1 (ENSHCOG00000009501) PCLAF (ENSHCOG00000009517) FCSK (ENSHCOG00000009528) commd9 (ENSHCOG00000000294) zgc:114188 (ENSHCOG00000009549) ENSHCOG00000009557 ENSHCOG00000009582 ENSHCOG00000009595 ENSHCOG00000009631 ENSHCOG00000009649 Pinecone sodierfish MODERN SPECIES 20 skic8 (ENSMMDG00005007388) crabp1a (ENSMMDG00005007381) sin3aa (ENSMMDG00005007370) PTPN9 (ENSMMDG00005005424) snupn (ENSMMDG00005005336) snx33 (ENSMMDG00005005328) CSPG4 (ENSMMDG00005005322) ENSMMDG00005005318 ENSMMDG00005005314 LINGO1 (ENSMMDG00005005311) hmg20a (ENSMMDG00005005307) PEAK1 (ENSMMDG00005005301) ENSMMDG00005005299 syt12 (ENSMMDG00005005296) cat (ENSMMDG00005002495) actr6 (ENSMMDG00005002399) #22 ENSMMDG00005002388 lyrm5b (ENSMMDG00005002387) ENSMMDG00005000973 ENSMMDG00005000942 ENSMMDG00005000732 psme3ip1 (ENSMMDG00005000683) cpne2 (ENSMMDG00005000654) ENSMMDG00005000640 ENSMMDG00005000635 ENSMMDG00005000400 ENSMMDG00005000330 ENSMMDG00005000327 ENSMMDG00005000321 ENSMMDG00005000253 si:dkey-12e7.4 (ENSMMDG00005000223) Cod MODERN SPECIES 22 ENSGMOG00000029428 ENSGMOG00000011112 ENSGMOG00000011136 faap24 (ENSGMOG00000030947) ENSGMOG00000026187 ambra1b (ENSGMOG00000014863) ENSGMOG00000033951 ENSGMOG00000009524 ENSGMOG00000028403 ENSGMOG00000009519 ENSGMOG00000009508 ENSGMOG00000035361 ENSGMOG00000031788 ENSGMOG00000034008 ENSGMOG00000031025 actr6 (ENSGMOG00000003691) #22 ENSGMOG00000027867 #35 si:ch211-59o9.10 (ENSGMOG00000037257) ENSGMOG00000003566 ENSGMOG00000003907 ENSGMOG00000024112 ENSGMOG00000003800 ENSGMOG00000030879 tnnt3a (ENSGMOG00000016942) ENSGMOG00000027097 ENSGMOG00000034763 ENSGMOG00000036471 tnni2a.1 (ENSGMOG00000026765) ENSGMOG00000031300 SYT8 (ENSGMOG00000016874) ENSGMOG00000016861 Protacanthopterygii ANCESTRAL SPECIES 171 ENSGT00950000182844.b.b.b.a.b ENSGT00940000158940.b ENSGT00940000153567.a.a.b.a.a ENSGT00640000091774.a.a ENSGT00640000091774.a.b ENSGT00950000183004.a.b.b ENSGT00720000108833 #22 ENSGT00390000000062 #35 ENSGT00950000183117.a.b.b ##34 ENSGT00940000153544.a.i.a ENSGT00390000007975.b.a ENSGT00940000158289.a.a ENSGT00940000163864 ENSGT00950000183017.b.b.a.b.b ENSGT00940000156676.c ENSGT00940000158553.b.a ENSGT00390000001810.b.b ENSGT00940000164439 ENSGT00940000157398.i.b ENSGT00390000010463.b Salmoninae ANCESTRAL SPECIES 120 ENSGT00940000155871.h.a ENSGT00940000155871.g ENSGT00530000065415.h ENSGT00390000011116.c ENSGT00940000155200 ENSGT00390000001368.l ENSGT00390000005855 ENSGT00390000000453.j ENSGT00950000182844.b.b.b.a.b.e ENSGT00940000153567.a.a.b.a.a.a ENSGT00640000091774.a.a.b ENSGT00640000091774.a.b.h ENSGT00640000091774.a.b.g.b ENSGT00950000183004.a.b.b ENSGT00510000047522.n ENSGT00720000108833 #22 ENSGT00390000000062 #35 ENSGT00950000183117.a.b.b.f ##34 ENSGT00940000153544.a.i.a.d ENSGT00940000158289.a.a.e.a.b ENSGT00390000012918.c.h ENSGT00940000155197.b ENSGT00940000164439.b ENSGT00940000157398.i.b ENSGT00390000010463.b ENSGT00940000155628.cb.b.a ENSGT00510000048252.t ENSGT00940000161555 ENSGT01100000263516.a.b.b.b.b.a.a.a.a.a.b.c.b ENSGT00940000153899.b.b ENSGT00940000160201.f Huchen MODERN SPECIES 557 ENSHHUG00000020504 ENSHHUG00000020493 ENSHHUG00000020492 zgc:101783 (ENSHHUG00000020469) ENSHHUG00000020457 actr6 (ENSHHUG00000020432) #22 sycp3 (ENSHHUG00000020415) #35 si:ch211-59o9.10 (ENSHHUG00000020402) ENSHHUG00000020397 mfsd11 (ENSHHUG00000020390) strap (ENSHHUG00000020372) nedd1 (ENSHHUG00000020367) sh3gl3b (ENSHHUG00000020359) ENSHHUG00000020340 ENSHHUG00000020331 ENSHHUG00000020326 ENSHHUG00000020233 ENSHHUG00000019732 PCLAF (ENSHHUG00000019721) ENSHHUG00000019653 ENSHHUG00000019644 Salmoninae_a ANCESTRAL SPECIES 13 ENSGT00950000182839.B.a.a.l.f ENSGT00940000155871.h.a ENSGT00530000065415.h ENSGT00390000011116.c ENSGT00940000155200 ENSGT00390000001368.l ENSGT00390000005855 ENSGT00390000000453.j ENSGT00950000182844.b.b.b.a.b.e ENSGT00940000153567.a.a.b.a.a.a ENSGT00640000091774.a.a.b ENSGT00640000091774.a.b.h ENSGT00640000091774.a.b.g.b ENSGT00950000183004.a.b.b ENSGT00510000047522.n ENSGT00720000108833 #22 ENSGT00390000000062.h #35 ENSGT00390000012918.c.h ENSGT00940000164439.b ENSGT00940000157398.i.b ENSGT00390000010463.b ENSGT00960000190193 ENSGT00530000063834.f ENSGT00390000018319.a.a.a.b.c ENSGT00390000006548.a.b.b ENSGT00940000155628.cb.b.a ENSGT00510000048252.t ENSGT00940000161555 ENSGT01100000263516.a.b.b.b.b.a.a.a.a.a.b.c.b ENSGT00940000153899.b.b ENSGT00940000160201.f Salmo ANCESTRAL SPECIES 9 ENSGT00940000161014.l ENSGT00950000182839.B.a.a.l.f ENSGT00940000155871.h.a ENSGT00530000065415.h ENSGT00390000011116.c ENSGT00940000155200.sb.a ENSGT00390000001368.l ENSGT00390000005855 ENSGT00390000000453.j ENSGT00950000182844.b.b.b.a.b.e ENSGT00940000153567.a.a.b.a.a.a ENSGT00640000091774.a.a.b ENSGT00640000091774.a.b.g.b ENSGT00950000183004.a.b.b ENSGT00510000047522.n ENSGT00720000108833 #22 ENSGT00390000000062.h #35 ENSGT00390000012918.c.h ENSGT00940000164439.b ENSGT00390000010463.b ENSGT00960000190193 ENSGT00990000211920 ENSGT00530000063834.f ENSGT00390000018319.a.a.a.b.c ENSGT00390000006548.a.b.b ENSGT00940000155628.cb.b.a ENSGT00510000048252.t ENSGT00940000161555 ENSGT01100000263516.a.b.b.b.b.a.a.a.a.a.b.c.b ENSGT00940000153899.b.b ENSGT00980000198710.e.b.a.a.a.a Atlantic salmon MODERN SPECIES 1 bhlh3 (ENSSSAG00000043542) RASSF8 (ENSSSAG00000043531) rask (ENSSSAG00000099686) ENSSSAG00000043478 banp (ENSSSAG00000043342) ENSSSAG00000099589 ENSSSAG00000043186 ENSSSAG00000042460 ENSSSAG00000029761 ENSSSAG00000018622 ENSSSAG00000017038 ENSSSAG00000016871 ENSSSAG00000067677 FAM3C (ENSSSAG00000016498) ENSSSAG00000091451 ENSSSAG00000015931 #22 ENSSSAG00000113855 sycp3 (ENSSSAG00000087032) #35 ENSSSAG00000015833 ENSSSAG00000015814 nedd1 (ENSSSAG00000015613) ENSSSAG00000015519 ENSSSAG00000015566 ENSSSAG00000015496 ENSSSAG00000015484 ENSSSAG00000015472 rs17 (ENSSSAG00000015449) ENSSSAG00000090042 ENSSSAG00000009474 cfap44 (ENSSSAG00000009369) znf774 (ENSSSAG00000118872) River trout MODERN SPECIES 37 RASSF8 (ENSSTUG00000004102) kras (ENSSTUG00000004056) ENSSTUG00000004049 ENSSTUG00000004016 banp (ENSSTUG00000003968) ENSSTUG00000003851 FBXO31 (ENSSTUG00000003303) fanci (ENSSTUG00000002112) ENSSTUG00000001929 RHCG (ENSSTUG00000001652) ENSSTUG00000001577 ENSSTUG00000001574 ENSSTUG00000001560 zgc:101783 (ENSSTUG00000001531) ENSSTUG00000001512 actr6 (ENSSTUG00000001441) #22 sycp3 (ENSSTUG00000001397) #35 mfsd11 (ENSSTUG00000001391) nedd1 (ENSSTUG00000001361) ENSSTUG00000001354 ENSSTUG00000001313 ENSSTUG00000001290 ENSSTUG00000001271 ENSSTUG00000001263 ENSSTUG00000001242 ENSSTUG00000001164 PCLAF (ENSSTUG00000001118) ENSSTUG00000001094 ENSSTUG00000010401 tmem17 (ENSSTUG00000010389) ENSSTUG00000010361 Oncorhynchus ANCESTRAL SPECIES 10 ENSGT00950000182839.B.a.a.l.f ENSGT00940000155871.h.a ENSGT00530000065415.h ENSGT00390000011116.c ENSGT00940000155200 ENSGT00390000001368.l ENSGT00390000005855 ENSGT00390000000453.j ENSGT00950000182844.b.b.b.a.b.e ENSGT00940000153567.a.a.b.a.a.a ENSGT00640000091774.a.a.b ENSGT00640000091774.a.b.h ENSGT00640000091774.a.b.g.b ENSGT00950000183004.a.b.b ENSGT00510000047522.n ENSGT00720000108833 #22 ENSGT00390000000062.h #35 ENSGT00390000012918.c.h ENSGT00940000164439.b ENSGT00940000157398.i.b ENSGT00390000010463.b ENSGT00960000190193 ENSGT00530000063834.f ENSGT00390000018319.a.a.a.b.c ENSGT00390000006548.a.b.b ENSGT00940000155628.cb.b.a ENSGT00510000048252.t ENSGT00940000161555 ENSGT01100000263516.a.b.b.b.b.a.a.a.a.a.b.c.b ENSGT00940000153899.b.b ENSGT00940000160201.f Rainbow trout MODERN SPECIES 11 bhlhe41 (ENSOMYG00000006233) RASSF8 (ENSOMYG00000006199) kras (ENSOMYG00000006134) ENSOMYG00000006027 banp (ENSOMYG00000005977) ENSOMYG00000005891 ENSOMYG00000005746 ENSOMYG00000005210 rhcg1-b (ENSOMYG00000004443) ENSOMYG00000003987 ENSOMYG00000003900 ENSOMYG00000003883 ENSOMYG00000003866 ENSOMYG00000003837 ENSOMYG00000003779 actr6 (ENSOMYG00000003691) #22 sycp3 (ENSOMYG00000003523) #35 ENSOMYG00000003467 ENSOMYG00000048053 nedd1 (ENSOMYG00000003390) ENSOMYG00000070283 ENSOMYG00000003231 ENSOMYG00000003149 ENSOMYG00000003121 ENSOMYG00000003090 ENSOMYG00000002961 ENSOMYG00000002752 ENSOMYG00000002714 ENSOMYG00000002562 ENSOMYG00000002520 ENSOMYG00000052174 Oncorhynchus_a ANCESTRAL SPECIES 5 ENSGT00950000182839.B.a.a.l.f ENSGT00940000155871.h.a ENSGT00530000065415.h ENSGT00390000011116.c ENSGT00940000155200 ENSGT00390000001368.l ENSGT00390000005855 ENSGT00390000000453.j ENSGT00950000182844.b.b.b.a.b.e ENSGT00940000153567.a.a.b.a.a.a ENSGT00640000091774.a.a.b ENSGT00640000091774.a.b.h ENSGT00640000091774.a.b.g.b ENSGT00950000183004.a.b.b ENSGT00510000047522.n ENSGT00720000108833 #22 ENSGT00390000000062.h #35 ENSGT00390000012918.c.h ENSGT00940000164439.b ENSGT00940000157398.i.b ENSGT00390000010463.b ENSGT00960000190193 ENSGT00530000063834.f ENSGT00390000018319.a.a.a.b.c ENSGT00390000006548.a.b.b ENSGT00940000155628.cb.b.a ENSGT00510000048252.t ENSGT00940000161555 ENSGT01100000263516.a.b.b.b.b.a.a.a.a.a.b.c.b ENSGT00940000153899.b.b ENSGT00940000160201.f Chinook salmon MODERN SPECIES 10 RASSF8 (ENSOTSG00005035486) ENSOTSG00005035433 ENSOTSG00005035421 ENSOTSG00005035410 banp (ENSOTSG00005035406) ENSOTSG00005035392 FBXO31 (ENSOTSG00005034959) fanci (ENSOTSG00005034930) RHCG (ENSOTSG00005034658) ENSOTSG00005034655 ENSOTSG00005034652 ENSOTSG00005034649 ENSOTSG00005034648 zgc:101783 (ENSOTSG00005034645) ENSOTSG00005034642 actr6 (ENSOTSG00005034621) #22 ARL1 (ENSOTSG00005034620) #31 sycp3 (ENSOTSG00005034618) #35 mfsd11 (ENSOTSG00005034617) nedd1 (ENSOTSG00005034616) ENSOTSG00005034615 ENSOTSG00005034613 ENSOTSG00005034610 ENSOTSG00005034609 ENSOTSG00005034601 CSNK1G1 (ENSOTSG00005034454) PCLAF (ENSOTSG00005034449) ENSOTSG00005034446 ENSOTSG00005034442 tmem17 (ENSOTSG00005034383) ENSOTSG00005034370 Coho salmon MODERN SPECIES 14 RASSF8 (ENSOKIG00005043659) kras (ENSOKIG00005043614) ENSOKIG00005043596 banp (ENSOKIG00005043581) ENSOKIG00005043524 FBXO31 (ENSOKIG00005043118) fanci (ENSOKIG00005042080) ENSOKIG00005041954 RHCG (ENSOKIG00005041654) ENSOKIG00005041524 ENSOKIG00005041495 ENSOKIG00005041467 ENSOKIG00005041414 zgc:101783 (ENSOKIG00005041383) ENSOKIG00005041357 actr6 (ENSOKIG00005041197) #22 ARL1 (ENSOKIG00005041145) #31 sycp3 (ENSOKIG00005041088) #35 MFSD11 (ENSOKIG00005041082) nedd1 (ENSOKIG00005041053) sh3gl3b (ENSOKIG00005041041) ENSOKIG00005041032 ENSOKIG00005040998 ENSOKIG00005040982 ENSOKIG00005040948 ENSOKIG00005040825 ENSOKIG00005040540 PCLAF (ENSOKIG00005040501) ENSOKIG00005040220 ENSOKIG00005040158 tmem17 (ENSOKIG00005040140) Northern pike MODERN SPECIES 18 kras (ENSELUG00000003058) ENSELUG00000003066 ENSELUG00000028248 banp (ENSELUG00000003078) ENSELUG00000003142 FBXO31 (ENSELUG00000003171) ENSELUG00000000104 fanci (ENSELUG00000003277) POLG (ENSELUG00000003339) RHCG (ENSELUG00000003374) ENSELUG00000034411 ENSELUG00000003412 ENSELUG00000003424 ENSELUG00000003438 ENSELUG00000003467 actr6 (ENSELUG00000003514) #22 sycp3 (ENSELUG00000003569) #35 arl1 (ENSELUG00000001287) #31 si:ch211-59o9.10 (ENSELUG00000003601) strap (ENSELUG00000003627) nedd1 (ENSELUG00000003698) ENSELUG00000003737 zgc:193812 (ENSELUG00000003754) ENSELUG00000003761 zgc:114188 (ENSELUG00000003785) ENSELUG00000003842 PCLAF (ENSELUG00000003869) tmem17 (ENSELUG00000003898) agbl2 (ENSELUG00000003925) ENSELUG00000003939 gdpgp1 (ENSELUG00000034100) Elephant shark MODERN SPECIES 1982 actr6 (ENSCMIG00000003126) #22 ENSCMIG00000003339 Cyclostomata ANCESTRAL SPECIES 939 ENSGT00720000108833 #22 ENSGT00950000182976.a.a Lamprey MODERN SPECIES 2517 ENSPMAG00000000219 actr6 (ENSPMAG00000000233) #22 Hagfish MODERN SPECIES 467 actr6 (ENSEBUG00000001878) #22 ENSEBUG00000003403 cry1a (ENSEBUG00000004008) ENSEBUG00000000527 ENSEBUG00000015369 rfx4 (ENSEBUG00000013884) BET1L (ENSEBUG00000010554) SIRT3 (ENSEBUG00000003693) ENSEBUG00000006258 Ciona ANCESTRAL SPECIES 20 ENSGT01030000234527.A.b ENSGT00530000065052.B ENSGT00390000000917 ENSGT00940000172582 ENSGT00720000108833 #22 ENSGT00530000065282 ENSGT00940000163863.a ENSGT00940000153141.A.a ENSGT00390000003197 ENSGT00440000035378.a.a.a Ciona savignyi MODERN SPECIES 137 ENSCSAVG00000006511 ENSCSAVG00000006504 ENSCSAVG00000006340 ENSCSAVG00000006214 ENSCSAVG00000006213 ENSCSAVG00000006209 ENSCSAVG00000006094 ENSCSAVG00000006086 ENSCSAVG00000006078 ENSCSAVG00000006044 #22 ENSCSAVG00000006040 ENSCSAVG00000005920 ENSCSAVG00000005905 ENSCSAVG00000005885 ENSCSAVG00000005864 ENSCSAVG00000005857 ENSCSAVG00000005851 ENSCSAVG00000005846 ENSCSAVG00000005839 ENSCSAVG00000005827 ENSCSAVG00000005823 ENSCSAVG00000005717 ENSCSAVG00000004328 Ciona intestinalis MODERN SPECIES 6 ENSCING00000004383 ENSCING00000011376 ENSCING00000021701 ENSCING00000011377 ENSCING00000021770 ENSCING00000003162 ENSCING00000017425 ENSCING00000023263 ENSCING00000021844 ENSCING00000022809 ENSCING00000003151 ENSCING00000003138 ENSCING00000011380 ENSCING00000003131 ENSCING00000003129 ENSCING00000003117 #22 ENSCING00000003113 ENSCING00000003110 ENSCING00000021011 ENSCING00000003099 ENSCING00000003095 ENSCING00000022455 ENSCING00000019144 ENSCING00000023142 ENSCING00000003089 ENSCING00000019826 ENSCING00000018317 ENSCING00000003062 ENSCING00000003060 ENSCING00000023098 ENSCING00000020227