Mus	ANCESTRAL SPECIES	23	ENSGT00940000154818.a.a #7	ENSGT00940000153110.B #8	ENSGT00390000008645 #9	ENSGT00390000009047.b #10	ENSGT00940000156375 #11	ENSGT00940000157129 #12	ENSGT00940000155834 #13	ENSGT00940000162446 #14	ENSGT00390000001561 #15	ENSGT00940000154098.a.d #16	ENSGT00390000008708 #17	ENSGT00500000045001 #18	ENSGT00940000157710 #19	ENSGT00940000154572.`c #20	ENSGT00600000084428.b #21	ENSGT00720000108833 #22	ENSGT00880000138031 #23	ENSGT00940000158187 #24	ENSGT00940000158037 #25	ENSGT00940000159389 #26	ENSGT00940000158600 #27	ENSGT00940000155166.A #28	ENSGT00390000016813 #29	ENSGT00940000155118 #30	ENSGT00940000155067.a #31	ENSGT00940000158254 #32	ENSGT00950000183117.a.a #34	ENSGT00390000000062.x.a.b #33	ENSGT00390000006747 #35	ENSGT01030000234578.B.a #36	ENSGT00390000014084 #37
Mus_A	ANCESTRAL SPECIES	11	ENSGT00940000154818.a.a #7	ENSGT00940000153110.B #8	ENSGT00390000008645 #9	ENSGT00390000009047.b #10	ENSGT00940000156375 #11	ENSGT00940000157129 #12	ENSGT00940000155834 #13	ENSGT00940000162446 #14	ENSGT00390000001561 #15	ENSGT00940000154098.a.d #16	ENSGT00390000008708 #17	ENSGT00500000045001 #18	ENSGT00940000157710 #19	ENSGT00940000154572.`c #20	ENSGT00600000084428.b #21	ENSGT00720000108833 #22	ENSGT00880000138031 #23	ENSGT00940000158187 #24	ENSGT00940000158037 #25	ENSGT00940000159389 #26	ENSGT00940000158600 #27	ENSGT00940000155166.A #28	ENSGT00390000016813 #29	ENSGT00940000155118 #30	ENSGT00940000155067.a #31	ENSGT00940000158254 #32	ENSGT00950000183117.a.a #34	ENSGT00390000000062.x.a.b #33	ENSGT00390000006747 #35	ENSGT01030000234578.B.a #36	ENSGT00390000014084 #37
Mus_B	ANCESTRAL SPECIES	10	ENSGT00940000154818.a.a #7	ENSGT00940000153110.B #8	ENSGT00390000008645 #9	ENSGT00390000009047.b #10	ENSGT00940000156375 #11	ENSGT00940000157129 #12	ENSGT00940000155834 #13	ENSGT00940000162446 #14	ENSGT00390000001561 #15	ENSGT00940000154098.a.d #16	ENSGT00390000008708 #17	ENSGT00500000045001 #18	ENSGT00940000157710 #19	ENSGT00940000154572.`c #20	ENSGT00600000084428.b #21	ENSGT00720000108833 #22	ENSGT00880000138031 #23	ENSGT00940000158187 #24	ENSGT00940000158037 #25	ENSGT00940000159389 #26	ENSGT00940000158600 #27	ENSGT00940000155166.A #28	ENSGT00390000016813 #29	ENSGT00940000155118 #30	ENSGT00940000155067.a #31	ENSGT00940000158254 #32	ENSGT00950000183117.a.a #34	ENSGT00390000000062.x.a.b #33	ENSGT00390000006747 #35	ENSGT01030000234578.B.a #36	ENSGT00390000014084 #37
Mouse	MODERN SPECIES	1	Snrpf (ENSMUSG00000020018) #7	Ccdc38 (ENSMUSG00000036168) #8	Amdhd1 (ENSMUSG00000015890) #9	Hal (ENSMUSG00000020017) #10	Lta4h (ENSMUSG00000015889) #11	Elk3 (ENSMUSG00000008398) #12	Cdk17 (ENSMUSG00000020015) #13	Cfap54 (ENSMUSG00000020014) #14	Nedd1 (ENSMUSG00000019988) #15	Tmpo (ENSMUSG00000019961) #16	Slc25a3 (ENSMUSG00000061904) #17	Ikbip (ENSMUSG00000019975) #18	Apaf1 (ENSMUSG00000019979) #19	Anks1b (ENSMUSG00000058589) #20	Uhrf1bp1l (ENSMUSG00000019951) #21	Actr6 (ENSMUSG00000019948) #22	Scyl2 (ENSMUSG00000069539) #23	Slc17a8 (ENSMUSG00000019935) #24	Nr1h4 (ENSMUSG00000047638) #25	Gas2l3 (ENSMUSG00000074802) #26	Ano4 (ENSMUSG00000035189) #27	Slc5a8 (ENSMUSG00000020062) #28	Utp20 (ENSMUSG00000004356) #29	Arl1 (ENSMUSG00000060904) #30	Spic (ENSMUSG00000004359) #31	Mybpc1 (ENSMUSG00000020061) #32	Sycp3 (ENSMUSG00000020059) #33	Chpt1 (ENSMUSG00000060002) #34	Gnptab (ENSMUSG00000035311) #35	Dram1 (ENSMUSG00000020057) #36	Washc3 (ENSMUSG00000020056) #37
Mus_C	ANCESTRAL SPECIES	7	ENSGT00940000154818.a.a #7	ENSGT00940000153110.B #8	ENSGT00390000008645 #9	ENSGT00390000009047.b #10	ENSGT00940000156375 #11	ENSGT00940000157129 #12	ENSGT00940000155834 #13	ENSGT00940000162446 #14	ENSGT00390000001561 #15	ENSGT00940000154098.a.d #16	ENSGT00390000008708 #17	ENSGT00500000045001 #18	ENSGT00940000157710 #19	ENSGT00940000154572.`c #20	ENSGT00600000084428.b #21	ENSGT00720000108833 #22	ENSGT00880000138031 #23	ENSGT00940000158187 #24	ENSGT00940000158037 #25	ENSGT00940000159389 #26	ENSGT00940000158600 #27	ENSGT00940000155166.A #28	ENSGT00390000016813 #29	ENSGT00940000155118 #30	ENSGT00940000155067.a #31	ENSGT00940000158254 #32	ENSGT00950000183117.a.a #34	ENSGT00390000000062.x.a.b #33	ENSGT00390000006747 #35	ENSGT01030000234578.B.a #36	ENSGT00390000014084 #37
spretus	MODERN SPECIES	1	Snrpf (MGP_SPRETEiJ_G0016553) #7	Ccdc38 (MGP_SPRETEiJ_G0016552) #8	Amdhd1 (MGP_SPRETEiJ_G0016551) #9	Hal (MGP_SPRETEiJ_G0016550) #10	Lta4h (MGP_SPRETEiJ_G0016549) #11	Elk3 (MGP_SPRETEiJ_G0016548) #12	Cdk17 (MGP_SPRETEiJ_G0016547) #13	Cfap54 (MGP_SPRETEiJ_G0016546) #14	Nedd1 (MGP_SPRETEiJ_G0016545) #15	Tmpo (MGP_SPRETEiJ_G0016544) #16	Slc25a3 (MGP_SPRETEiJ_G0016543) #17	Ikbip (MGP_SPRETEiJ_G0016542) #18	Apaf1 (MGP_SPRETEiJ_G0016541) #19	Anks1b (MGP_SPRETEiJ_G0016540) #20	Uhrf1bp1l (MGP_SPRETEiJ_G0016539) #21	Actr6 (MGP_SPRETEiJ_G0016538) #22	Scyl2 (MGP_SPRETEiJ_G0016537) #23	Slc17a8 (MGP_SPRETEiJ_G0016536) #24	Nr1h4 (MGP_SPRETEiJ_G0016535) #25	Gas2l3 (MGP_SPRETEiJ_G0016534) #26	Ano4 (MGP_SPRETEiJ_G0016533) #27	Slc5a8 (MGP_SPRETEiJ_G0016532) #28	Utp20 (MGP_SPRETEiJ_G0016531) #29	Arl1 (MGP_SPRETEiJ_G0016530) #30	Spic (MGP_SPRETEiJ_G0016529) #31	Mybpc1 (MGP_SPRETEiJ_G0016528) #32	MGP_SPRETEiJ_G0016527 #34	Sycp3 (MGP_SPRETEiJ_G0016526) #33	Gnptab (MGP_SPRETEiJ_G0016525) #35	Dram1 (MGP_SPRETEiJ_G0016524) #36	Washc3 (MGP_SPRETEiJ_G0016523) #37
Steppe mouse	MODERN SPECIES	2939															Uhrf1bp1l (ENSMSIG00000017125) #21	Actr6 (ENSMSIG00000017172) #22	Scyl2 (ENSMSIG00000017210) #23	Slc17a8 (ENSMSIG00000017267) #24	Nr1h4 (ENSMSIG00000017294) #25	Gas2l3 (ENSMSIG00000017395) #26	Ano4 (ENSMSIG00000017553) #27	Slc5a8 (ENSMSIG00000017818) #28	ENSMSIG00000017854	Utp20 (ENSMSIG00000017862) #29	ENSMSIG00000017985	ENSMSIG00000017992	Spic (ENSMSIG00000018013) #31	Mybpc1 (ENSMSIG00000018042) #32
Ryukyu mouse	MODERN SPECIES	1	Snrpf (MGP_CAROLIEiJ_G0015735) #7	Ccdc38 (MGP_CAROLIEiJ_G0015734) #8	Amdhd1 (MGP_CAROLIEiJ_G0015733) #9	Hal (MGP_CAROLIEiJ_G0015732) #10	Lta4h (MGP_CAROLIEiJ_G0015731) #11	Elk3 (MGP_CAROLIEiJ_G0015730) #12	Cdk17 (MGP_CAROLIEiJ_G0015729) #13	Cfap54 (MGP_CAROLIEiJ_G0015728) #14	Nedd1 (MGP_CAROLIEiJ_G0015727) #15	MGP_CAROLIEiJ_G0015726 ##16	Slc25a3 (MGP_CAROLIEiJ_G0015725) #17	Ikbip (MGP_CAROLIEiJ_G0015724) #18	Apaf1 (MGP_CAROLIEiJ_G0015723) #19	Anks1b (MGP_CAROLIEiJ_G0015722) #20	Uhrf1bp1l (MGP_CAROLIEiJ_G0015721) #21	Actr6 (MGP_CAROLIEiJ_G0015720) #22	Scyl2 (MGP_CAROLIEiJ_G0015719) #23	Slc17a8 (MGP_CAROLIEiJ_G0015718) #24	Nr1h4 (MGP_CAROLIEiJ_G0015717) #25	Gas2l3 (MGP_CAROLIEiJ_G0015716) #26	Ano4 (MGP_CAROLIEiJ_G0015715) #27	Slc5a8 (MGP_CAROLIEiJ_G0015714) #28	Utp20 (MGP_CAROLIEiJ_G0015713) #29	Arl1 (MGP_CAROLIEiJ_G0015712) #30	MGP_CAROLIEiJ_G0015711 #31	Mybpc1 (MGP_CAROLIEiJ_G0015710) #32	Sycp3 (MGP_CAROLIEiJ_G0015709) #33	Chpt1 (MGP_CAROLIEiJ_G0015708) #34	Gnptab (MGP_CAROLIEiJ_G0015707) #35	Dram1 (MGP_CAROLIEiJ_G0015706) #36	Washc3 (MGP_CAROLIEiJ_G0015705) #37
Shrew mouse	MODERN SPECIES	22	Snrpf (MGP_PahariEiJ_G0031350) #7	Ccdc38 (MGP_PahariEiJ_G0031351) #8	MGP_PahariEiJ_G0031352 #9	Hal (MGP_PahariEiJ_G0031353) #10	Lta4h (MGP_PahariEiJ_G0031354) #11	Elk3 (MGP_PahariEiJ_G0031355) #12	Cdk17 (MGP_PahariEiJ_G0031356) #13	Cfap54 (MGP_PahariEiJ_G0031357) #14	Nedd1 (MGP_PahariEiJ_G0031358) #15	Tmpo (MGP_PahariEiJ_G0031359) #16	Slc25a3 (MGP_PahariEiJ_G0031360) #17	Ikbip (MGP_PahariEiJ_G0031361) #18	Apaf1 (MGP_PahariEiJ_G0031362) #19	Anks1b (MGP_PahariEiJ_G0031363) #20	Uhrf1bp1l (MGP_PahariEiJ_G0031364) #21	Actr6 (MGP_PahariEiJ_G0031365) #22	Scyl2 (MGP_PahariEiJ_G0031366) #23	Slc17a8 (MGP_PahariEiJ_G0031367) #24	Nr1h4 (MGP_PahariEiJ_G0031368) #25	Gas2l3 (MGP_PahariEiJ_G0031369) #26	Ano4 (MGP_PahariEiJ_G0031370) #27	Slc5a8 (MGP_PahariEiJ_G0031371) #28	Utp20 (MGP_PahariEiJ_G0031372) #29	Arl1 (MGP_PahariEiJ_G0031373) #30	Spic (MGP_PahariEiJ_G0031374) #31	Mybpc1 (MGP_PahariEiJ_G0031375) #32	MGP_PahariEiJ_G0031376 #34	Sycp3 (MGP_PahariEiJ_G0031377) #33	Gnptab (MGP_PahariEiJ_G0031378) #35	Dram1 (MGP_PahariEiJ_G0031379) #36	Washc3 (MGP_PahariEiJ_G0031380) #37