Hystricomorpha	ANCESTRAL SPECIES	11	ENSGT00950000183031.B.e.a	ENSGT00940000159912	ENSGT00530000063540.a	ENSGT00950000182835.c.c	ENSGT00940000162763	ENSGT00940000161795	ENSGT00940000155877	ENSGT00940000159438	ENSGT00390000012692	ENSGT00940000160145.b	ENSGT00530000063168.a.a.b	ENSGT00940000157847	ENSGT00940000156319 #17	ENSGT00940000155170 #20	ENSGT00390000010825.a #21	ENSGT00940000155614 #22	ENSGT00940000159667 #24	ENSGT00940000161236.a.a #25	ENSGT00940000162496 #26	ENSGT00890000139436.A.b #27	ENSGT00510000049526	ENSGT00940000162389	ENSGT00940000162070	ENSGT00940000160559	ENSGT00940000160940	ENSGT00940000159479	ENSGT00940000162262	ENSGT00940000160459	ENSGT01090000262464	ENSGT00940000153313.C.a	ENSGT00940000153763.a
Hystricomorpha_a	ANCESTRAL SPECIES	51	ENSGT00950000183031.B.e.a	ENSGT00940000159912	ENSGT00530000063540.a	ENSGT00950000182835.c.c	ENSGT00940000162763	ENSGT00940000161795	ENSGT00940000155877	ENSGT00940000159438	ENSGT00390000012692	ENSGT00940000160145.b	ENSGT00530000063168.a.a.b	ENSGT00940000157847	ENSGT00940000156319 #17	ENSGT00940000155170 #20	ENSGT00390000010825.a #21	ENSGT00940000155614 #22	ENSGT00940000159667 #24	ENSGT00940000161236.a.a #25	ENSGT00940000162496 #26	ENSGT00890000139436.A.b #27	ENSGT00510000049526
Hystricomorpha_b	ANCESTRAL SPECIES	74	ENSGT00940000159912	ENSGT00530000063540.a	ENSGT00950000182835.c.c	ENSGT00940000162763	ENSGT00940000161795	ENSGT00940000155877	ENSGT00940000159438	ENSGT00390000012692	ENSGT00540000070023.c.a.a	ENSGT00940000160145.b	ENSGT00530000063168.a.a.b	ENSGT00940000157847	ENSGT00940000156319 #17	ENSGT00940000155170 #20	ENSGT00390000010825.a #21	ENSGT00940000155614 #22	ENSGT00940000159667 #24	ENSGT00940000161236.a.a #25	ENSGT00940000162496 #26	ENSGT00890000139436.A.b #27
Degu	MODERN SPECIES	374											HUWE1 (ENSODEG00000010114) #17	ENSODEG00000019693 #18	ENSODEG00000010612 #19	ENSODEG00000010698 #20	RIBC1 (ENSODEG00000010330) #21	SMC1A (ENSODEG00000010101) #22	ENSODEG00000019864 #23	IQSEC2 (ENSODEG00000010779) #24	KDM5C (ENSODEG00000009463) #25	TSPYL2 (ENSODEG00000010081) #26	GPR173 (ENSODEG00000019865) #27	ENSODEG00000011020 #28	ENSODEG00000019806 #29	ENSODEG00000019799 #30	ENSODEG00000010333 #31
Long-tailed chinchilla	MODERN SPECIES	182	PFKFB1 (ENSCLAG00000009234)	ENSCLAG00000007306	MAGED2 (ENSCLAG00000007195)	GNL3L (ENSCLAG00000003823)	FGD1 (ENSCLAG00000002961)	TSR2 (ENSCLAG00000007235)	ENSCLAG00000007014	WNK3 (ENSCLAG00000008201)	ENSCLAG00000017687	FAM120C (ENSCLAG00000004701)	PHF8 (ENSCLAG00000007973)	ENSCLAG00000006563	HUWE1 (ENSCLAG00000006361) #17	HSD17B10 (ENSCLAG00000006462) #20	RIBC1 (ENSCLAG00000005268) #21	SMC1A (ENSCLAG00000005525) #22	IQSEC2 (ENSCLAG00000006285) #24	KDM5C (ENSCLAG00000003746) #25	TSPYL2 (ENSCLAG00000003149) #26	GPR173 (ENSCLAG00000003720) #27
Guinea pig	MODERN SPECIES	139					GNL3L (ENSCPOG00000015617)	FGD1 (ENSCPOG00000039848)	TSR2 (ENSCPOG00000033139)	WNK3 (ENSCPOG00000004954)	FAM120C (ENSCPOG00000036579)	PHF8 (ENSCPOG00000011610)	ENSCPOG00000008302	ENSCPOG00000011120	HUWE1 (ENSCPOG00000005045) #17	HSD17B10 (ENSCPOG00000032944) #20	ENSCPOG00000009591 #21	SMC1A (ENSCPOG00000009577) #22	IQSEC2 (ENSCPOG00000009038) #24	KDM5C (ENSCPOG00000009025) #25	ENSCPOG00000024448	TSPYL2 (ENSCPOG00000033213) #26	GPR173 (ENSCPOG00000013820) #27	ENSCPOG00000033091	ENSCPOG00000013229
Naked mole-rat female	MODERN SPECIES	31	ENSHGLG00000000815	ENSHGLG00000001296	ENSHGLG00000032069	ENSHGLG00000001807	ENSHGLG00000042565	ENSHGLG00000002949	ENSHGLG00000042044	FAM120C (ENSHGLG00000001697)	ENSHGLG00000044253	ENSHGLG00000000760	ENSHGLG00000006421	ENSHGLG00000010236	HUWE1 (ENSHGLG00000002470) #17	HSD17B10 (ENSHGLG00000001595) #20	RIBC1 (ENSHGLG00000046017) #21	SMC1A (ENSHGLG00000000593) #22	IQSEC2 (ENSHGLG00000001050) #24	KDM5C (ENSHGLG00000000756) #25	ENSHGLG00000046508	KANTR (ENSHGLG00000037883)	ENSHGLG00000019851	TSPYL2 (ENSHGLG00000003451) #26	GPR173 (ENSHGLG00000002986) #27	ENSHGLG00000035259	ENSHGLG00000036385	ENSHGLG00000045356	ENSHGLG00000042169	ENSHGLG00000000115	ENSHGLG00000000108	ENSHGLG00000000103	ENSHGLG00000042632