Hystricomorpha	ANCESTRAL SPECIES	11	ENSGT00950000183031.B.e.a	ENSGT00940000159912	ENSGT00530000063540.a	ENSGT00950000182835.c.c #7	ENSGT00940000162763 #8	ENSGT00940000161795 #9	ENSGT00940000155877 #10	ENSGT00940000159438 #11	ENSGT00390000012692 #12	ENSGT00940000160145.b #14	ENSGT00530000063168.a.a.b #16	ENSGT00940000157847 #17	ENSGT00940000156319 #19	ENSGT00940000155170 #20	ENSGT00390000010825.a #21	ENSGT00940000155614 #22	ENSGT00940000159667 #23	ENSGT00940000161236.a.a #24	ENSGT00940000162496 #25	ENSGT00890000139436.A.b #26	ENSGT00510000049526	ENSGT00940000162389	ENSGT00940000162070	ENSGT00940000160559	ENSGT00940000160940	ENSGT00940000159479	ENSGT00940000162262	ENSGT00940000160459	ENSGT01090000262464	ENSGT00940000153313.C.a	ENSGT00940000153763.a
Hystricomorpha_a	ANCESTRAL SPECIES	51	ENSGT00950000183031.B.e.a	ENSGT00940000159912	ENSGT00530000063540.a	ENSGT00950000182835.c.c #7	ENSGT00940000162763 #8	ENSGT00940000161795 #9	ENSGT00940000155877 #10	ENSGT00940000159438 #11	ENSGT00390000012692 #12	ENSGT00940000160145.b #14	ENSGT00530000063168.a.a.b #16	ENSGT00940000157847 #17	ENSGT00940000156319 #19	ENSGT00940000155170 #20	ENSGT00390000010825.a #21	ENSGT00940000155614 #22	ENSGT00940000159667 #23	ENSGT00940000161236.a.a #24	ENSGT00940000162496 #25	ENSGT00890000139436.A.b #26	ENSGT00510000049526
Hystricomorpha_b	ANCESTRAL SPECIES	74	ENSGT00940000159912	ENSGT00530000063540.a	ENSGT00950000182835.c.c #7	ENSGT00940000162763 #8	ENSGT00940000161795 #9	ENSGT00940000155877 #10	ENSGT00940000159438 #11	ENSGT00390000012692 #12	ENSGT00540000070023.c.a.a	ENSGT00940000160145.b #14	ENSGT00530000063168.a.a.b #16	ENSGT00940000157847 #17	ENSGT00940000156319 #19	ENSGT00940000155170 #20	ENSGT00390000010825.a #21	ENSGT00940000155614 #22	ENSGT00940000159667 #23	ENSGT00940000161236.a.a #24	ENSGT00940000162496 #25	ENSGT00890000139436.A.b #26
Long-tailed chinchilla	MODERN SPECIES	182	PFKFB1 (ENSCLAG00000009234) #7	ENSCLAG00000007306 #8	MAGED2 (ENSCLAG00000007195) #9	GNL3L (ENSCLAG00000003823) #10	FGD1 (ENSCLAG00000002961) #11	TSR2 (ENSCLAG00000007235) #12	ENSCLAG00000007014 #13	WNK3 (ENSCLAG00000008201) #14	ENSCLAG00000017687 #15	FAM120C (ENSCLAG00000004701) #16	PHF8 (ENSCLAG00000007973) #17	ENSCLAG00000006563 #18	HUWE1 (ENSCLAG00000006361) #19	HSD17B10 (ENSCLAG00000006462) #20	RIBC1 (ENSCLAG00000005268) #21	SMC1A (ENSCLAG00000005525) #22	IQSEC2 (ENSCLAG00000006285) #23	KDM5C (ENSCLAG00000003746) #24	TSPYL2 (ENSCLAG00000003149) #25	GPR173 (ENSCLAG00000003720) #26
Degu	MODERN SPECIES	374											HUWE1 (ENSODEG00000010114) #19	ENSODEG00000019693	ENSODEG00000010612	ENSODEG00000010698 #20	RIBC1 (ENSODEG00000010330) #21	SMC1A (ENSODEG00000010101) #22	ENSODEG00000019864	IQSEC2 (ENSODEG00000010779) #23	KDM5C (ENSODEG00000009463) #24	TSPYL2 (ENSODEG00000010081) #25	GPR173 (ENSODEG00000019865) #26	ENSODEG00000011020	ENSODEG00000019806	ENSODEG00000019799	ENSODEG00000010333
Guinea pig	MODERN SPECIES	139					GNL3L (ENSCPOG00000015617) #10	FGD1 (ENSCPOG00000039848) #11	TSR2 (ENSCPOG00000033139) #12	WNK3 (ENSCPOG00000004954) #14	FAM120C (ENSCPOG00000036579) #16	PHF8 (ENSCPOG00000011610) #17	ENSCPOG00000008302	ENSCPOG00000011120	HUWE1 (ENSCPOG00000005045) #19	HSD17B10 (ENSCPOG00000032944) #20	ENSCPOG00000009591 #21	SMC1A (ENSCPOG00000009577) #22	IQSEC2 (ENSCPOG00000009038) #23	KDM5C (ENSCPOG00000009025) #24	ENSCPOG00000024448	TSPYL2 (ENSCPOG00000033213) #25	GPR173 (ENSCPOG00000013820) #26	ENSCPOG00000033091	ENSCPOG00000013229
Naked mole-rat female	MODERN SPECIES	31	ENSHGLG00000000815	ENSHGLG00000001296	ENSHGLG00000032069	ENSHGLG00000001807	ENSHGLG00000042565	ENSHGLG00000002949 #14	ENSHGLG00000042044	FAM120C (ENSHGLG00000001697) #16	ENSHGLG00000044253	ENSHGLG00000000760 #17	ENSHGLG00000006421	ENSHGLG00000010236	HUWE1 (ENSHGLG00000002470) #19	HSD17B10 (ENSHGLG00000001595) #20	RIBC1 (ENSHGLG00000046017) #21	SMC1A (ENSHGLG00000000593) #22	IQSEC2 (ENSHGLG00000001050) #23	KDM5C (ENSHGLG00000000756) #24	ENSHGLG00000046508	KANTR (ENSHGLG00000037883)	ENSHGLG00000019851	TSPYL2 (ENSHGLG00000003451) #25	GPR173 (ENSHGLG00000002986) #26	ENSHGLG00000035259	ENSHGLG00000036385	ENSHGLG00000045356	ENSHGLG00000042169	ENSHGLG00000000115	ENSHGLG00000000108	ENSHGLG00000000103	ENSHGLG00000042632