Muroidea	ANCESTRAL SPECIES	30	ENSGT00940000159912	ENSGT00530000063540.a	ENSGT00950000182835.c.c	ENSGT00940000162763	ENSGT00940000161795	ENSGT00940000162980	ENSGT00940000155877	ENSGT00940000159438	ENSGT00390000012692	ENSGT00940000160145.b	ENSGT00530000063168.a.a.b	ENSGT00940000157847.h	ENSGT00940000156319	ENSGT00940000155170	ENSGT00390000010825.a	ENSGT00940000155614 #22	ENSGT00940000159667	ENSGT00940000161236.a.a	ENSGT00980000198762	ENSGT00940000162496	ENSGT00890000139436.A.b
Muroidea_A	ANCESTRAL SPECIES	7	ENSGT00940000159912	ENSGT00530000063540.a	ENSGT00950000182835.c.c	ENSGT00940000162763	ENSGT00940000161795	ENSGT00940000162980	ENSGT00940000155877	ENSGT00940000159438	ENSGT00390000012692	ENSGT00940000160145.b	ENSGT00530000063168.a.a.b	ENSGT00940000157847.h	ENSGT00940000156319	ENSGT00940000155170	ENSGT00390000010825.a	ENSGT00940000155614 #22	ENSGT00940000159667	ENSGT00940000161236.a.a	ENSGT00980000198762	ENSGT00940000162496	ENSGT00890000139436.A.b	ENSGT00390000005717.e.a.a	ENSGT00520000056155.g.a	ENSGT00940000155212	ENSGT00390000016722	ENSGT00520000056155.g.b.a	ENSGT00410000025556.a.b	ENSGT00940000158265	ENSGT00940000155821	ENSGT00950000183119.a.e.a.d.g.a.b	ENSGT00390000004175
Murinae	ANCESTRAL SPECIES	32	ENSGT00940000159912	ENSGT00530000063540.a	ENSGT00950000182835.c.c	ENSGT00940000162763	ENSGT00940000161795	ENSGT00940000162980	ENSGT00940000155877	ENSGT00940000159438	ENSGT00390000012692	ENSGT00940000160145.b	ENSGT00530000063168.a.a.b	ENSGT00940000157847.h	ENSGT00940000156319	ENSGT00940000155170	ENSGT00390000010825.a	ENSGT00940000155614 #22	ENSGT00940000159667	ENSGT00940000161236.a.a	ENSGT00980000198762	ENSGT00940000162496	ENSGT00890000139436.A.b	ENSGT00390000005717.e.a.a	ENSGT00520000056155.g.a.d	ENSGT00940000155212	ENSGT00390000016722	ENSGT00390000005717.e.b.a	ENSGT00390000005717.e.b.b.a	ENSGT00520000056155.g.a.c.a	ENSGT00410000025556.a.b	ENSGT00940000158265	ENSGT00940000155821
Mus	ANCESTRAL SPECIES	9	ENSGT00510000049526	ENSGT00940000159912	ENSGT00530000063540.a	ENSGT00950000182835.c.c	ENSGT00940000162763	ENSGT00940000161795	ENSGT00940000155877	ENSGT00940000159438	ENSGT00390000012692	ENSGT00940000160145.b	ENSGT00530000063168.a.a.b	ENSGT00940000157847.h	ENSGT00940000156319	ENSGT00940000155170	ENSGT00390000010825.a	ENSGT00940000155614 #22	ENSGT00940000159667	ENSGT00940000161236.a.a	ENSGT00980000198762	ENSGT00940000162496	ENSGT00890000139436.A.b	ENSGT00390000005717.e.a.a	ENSGT00940000155212	ENSGT00390000016722	ENSGT00940000163664	ENSGT00840000130063	ENSGT00940000162993	ENSGT00950000183031.B.e.a	ENSGT00940000161062	ENSGT00940000162603	ENSGT00940000163673
Mus_A	ANCESTRAL SPECIES	15	ENSGT00510000049526	ENSGT00940000159912	ENSGT00530000063540.a	ENSGT00950000182835.c.c	ENSGT00940000162763	ENSGT00940000161795	ENSGT00940000155877	ENSGT00940000159438	ENSGT00390000012692	ENSGT00940000160145.b	ENSGT00530000063168.a.a.b.g	ENSGT00940000157847.h	ENSGT00940000156319	ENSGT00940000155170	ENSGT00390000010825.a	ENSGT00940000155614 #22	ENSGT00940000159667	ENSGT00940000161236.a.a	ENSGT00980000198762	ENSGT00940000162496	ENSGT00890000139436.A.b	ENSGT00390000005717.e.a.a	ENSGT00940000155212	ENSGT00390000016722	ENSGT00940000163664	ENSGT00840000130063	ENSGT00940000162993	ENSGT00950000183031.B.e.a	ENSGT00940000161062	ENSGT00940000162603	ENSGT00390000016779.b.a.a.a
Mus_B	ANCESTRAL SPECIES	14	ENSGT00510000049526	ENSGT00940000159912	ENSGT00530000063540.a	ENSGT00950000182835.c.c	ENSGT00940000162763	ENSGT00940000161795	ENSGT00940000155877	ENSGT00940000159438	ENSGT00390000012692	ENSGT00940000160145.b	ENSGT00530000063168.a.a.b.g	ENSGT00940000157847.h	ENSGT00940000156319	ENSGT00940000155170	ENSGT00390000010825.a	ENSGT00940000155614 #22	ENSGT00940000159667	ENSGT00940000161236.a.a	ENSGT00980000198762	ENSGT00940000162496	ENSGT00890000139436.A.b	ENSGT00390000005717.e.a.a	ENSGT00940000155212	ENSGT00390000016722	ENSGT00940000163664	ENSGT00840000130063	ENSGT00940000162993	ENSGT00950000183031.B.e.a	ENSGT00940000161062	ENSGT00940000162603	ENSGT00390000016779.b.a.a.a
Mus_C	ANCESTRAL SPECIES	22	ENSGT00940000159912	ENSGT00530000063540.a	ENSGT00950000182835.c.c	ENSGT00940000162763	ENSGT00940000161795	ENSGT00940000162980	ENSGT00940000155877	ENSGT00940000159438	ENSGT00390000012692	ENSGT00940000160145.b	ENSGT00530000063168.a.a.b.g	ENSGT00940000157847.h	ENSGT00940000156319	ENSGT00940000155170	ENSGT00390000010825.a	ENSGT00940000155614 #22	ENSGT00940000159667	ENSGT00940000161236.a.a	ENSGT00940000162496	ENSGT00890000139436.A.b	ENSGT00390000005717.e.a.a	ENSGT00940000155212	ENSGT00390000016722	ENSGT00840000130063	ENSGT00940000162993	ENSGT00950000183031.B.e.a	ENSGT00940000161062	ENSGT00940000162603	ENSGT00390000016779.b.a.a.a	ENSGT00940000163673	ENSGT00390000004891
Steppe mouse	MODERN SPECIES	2070																Smc1a (ENSMSIG00000018484) #22
spretus	MODERN SPECIES	19	Tmem29 (MGP_SPRETEiJ_G0034653)	Apex2 (MGP_SPRETEiJ_G0034654)	Alas2 (MGP_SPRETEiJ_G0034655)	Pfkfb1 (MGP_SPRETEiJ_G0034656)	Tro (MGP_SPRETEiJ_G0034657)	Maged2 (MGP_SPRETEiJ_G0034658)	Gnl3l (MGP_SPRETEiJ_G0034659)	Fgd1 (MGP_SPRETEiJ_G0034660)	Tsr2 (MGP_SPRETEiJ_G0034661)	Wnk3 (MGP_SPRETEiJ_G0034662)	Fam120c (MGP_SPRETEiJ_G0034663)	Phf8 (MGP_SPRETEiJ_G0034664)	Huwe1 (MGP_SPRETEiJ_G0034665)	Hsd17b10 (MGP_SPRETEiJ_G0034666)	Ribc1 (MGP_SPRETEiJ_G0034667)	Smc1a (MGP_SPRETEiJ_G0034668) #22	Iqsec2 (MGP_SPRETEiJ_G0034669)	Kdm5c (MGP_SPRETEiJ_G0034670)	Tspyl2 (MGP_SPRETEiJ_G0034671)	Gpr173 (MGP_SPRETEiJ_G0034672)	Cldn34a (MGP_SPRETEiJ_G0034673)	Shroom2 (MGP_SPRETEiJ_G0034674)	Gpr143 (MGP_SPRETEiJ_G0034675)	Mageh1 (MGP_SPRETEiJ_G0034676)	Foxr2 (MGP_SPRETEiJ_G0034677)	Rragb (MGP_SPRETEiJ_G0034678)	Klf8 (MGP_SPRETEiJ_G0034679)	Ubqln2 (MGP_SPRETEiJ_G0034680)	MGP_SPRETEiJ_G0034681	MGP_SPRETEiJ_G0034682	Kctd12b (MGP_SPRETEiJ_G0034683)
Mouse	MODERN SPECIES	37	Tmem29 (ENSMUSG00000041353)	Apex2 (ENSMUSG00000025269)	Alas2 (ENSMUSG00000025270)	Pfkfb1 (ENSMUSG00000025271)	Tro (ENSMUSG00000025272)	Maged2 (ENSMUSG00000025268)	Gnl3l (ENSMUSG00000025266)	Fgd1 (ENSMUSG00000025265)	Tsr2 (ENSMUSG00000025264)	Wnk3 (ENSMUSG00000041245)	Fam120c (ENSMUSG00000025262)	Phf8 (ENSMUSG00000041229)	Huwe1 (ENSMUSG00000025261)	Hsd17b10 (ENSMUSG00000025260)	Ribc1 (ENSMUSG00000025257)	Smc1a (ENSMUSG00000041133) #22	Iqsec2 (ENSMUSG00000041115)	Kdm5c (ENSMUSG00000025332)	Kantr (ENSMUSG00000087403)	Tspyl2 (ENSMUSG00000041096)	Gpr173 (ENSMUSG00000056679)	Cldn34a (ENSMUSG00000091863)	Shroom2 (ENSMUSG00000045180)	Gpr143 (ENSMUSG00000025333)	Usp51 (ENSMUSG00000067215)	Mageh1 (ENSMUSG00000047238)	Foxr2 (ENSMUSG00000071665)	Rragb (ENSMUSG00000041658)	Klf8 (ENSMUSG00000041649)	Ubqln2 (ENSMUSG00000050148)	Cypt3 (ENSMUSG00000048573)
Ryukyu mouse	MODERN SPECIES	19	Tmem29 (MGP_CAROLIEiJ_G0033483)	Apex2 (MGP_CAROLIEiJ_G0033484)	Alas2 (MGP_CAROLIEiJ_G0033485)	Pfkfb1 (MGP_CAROLIEiJ_G0033486)	Tro (MGP_CAROLIEiJ_G0033487)	Maged2 (MGP_CAROLIEiJ_G0033488)	Gnl3l (MGP_CAROLIEiJ_G0033489)	Fgd1 (MGP_CAROLIEiJ_G0033490)	Tsr2 (MGP_CAROLIEiJ_G0033491)	Wnk3 (MGP_CAROLIEiJ_G0033492)	Fam120c (MGP_CAROLIEiJ_G0033493)	Phf8 (MGP_CAROLIEiJ_G0033494)	Huwe1 (MGP_CAROLIEiJ_G0033495)	Hsd17b10 (MGP_CAROLIEiJ_G0033496)	Ribc1 (MGP_CAROLIEiJ_G0033497)	Smc1a (MGP_CAROLIEiJ_G0033498) #22	Iqsec2 (MGP_CAROLIEiJ_G0033499)	Kdm5c (MGP_CAROLIEiJ_G0033500)	Tspyl2 (MGP_CAROLIEiJ_G0033501)	Gpr173 (MGP_CAROLIEiJ_G0033502)	Cldn34a (MGP_CAROLIEiJ_G0033503)	Shroom2 (MGP_CAROLIEiJ_G0033504)	Gpr143 (MGP_CAROLIEiJ_G0033505)	Usp51 (MGP_CAROLIEiJ_G0033506)	Mageh1 (MGP_CAROLIEiJ_G0033507)	Foxr2 (MGP_CAROLIEiJ_G0033508)	Rragb (MGP_CAROLIEiJ_G0033509)	Klf8 (MGP_CAROLIEiJ_G0033510)	Ubqln2 (MGP_CAROLIEiJ_G0033511)	Cypt3 (MGP_CAROLIEiJ_G0033512)	Kctd12b (MGP_CAROLIEiJ_G0033513)
Shrew mouse	MODERN SPECIES	23	Tmem29 (MGP_PahariEiJ_G0032022)	Apex2 (MGP_PahariEiJ_G0032023)	Alas2 (MGP_PahariEiJ_G0032024)	Pfkfb1 (MGP_PahariEiJ_G0032025)	MGP_PahariEiJ_G0032026	Maged2 (MGP_PahariEiJ_G0032027)	Gnl3l (MGP_PahariEiJ_G0032028)	Fgd1 (MGP_PahariEiJ_G0032029)	Tsr2 (MGP_PahariEiJ_G0032030)	Wnk3 (MGP_PahariEiJ_G0032031)	Fam120c (MGP_PahariEiJ_G0032032)	Phf8 (MGP_PahariEiJ_G0032033)	Huwe1 (MGP_PahariEiJ_G0032034)	Hsd17b10 (MGP_PahariEiJ_G0032035)	Ribc1 (MGP_PahariEiJ_G0032036)	Smc1a (MGP_PahariEiJ_G0032037) #22	Iqsec2 (MGP_PahariEiJ_G0032038)	Kdm5c (MGP_PahariEiJ_G0032039)	Tspyl2 (MGP_PahariEiJ_G0032040)	Gpr173 (MGP_PahariEiJ_G0032041)	Cldn34a (MGP_PahariEiJ_G0032042)	Shroom2 (MGP_PahariEiJ_G0032043)	Gpr143 (MGP_PahariEiJ_G0032044)	Usp51 (MGP_PahariEiJ_G0032045)	Mageh1 (MGP_PahariEiJ_G0032046)	Foxr2 (MGP_PahariEiJ_G0032047)	Rragb (MGP_PahariEiJ_G0032048)	Klf8 (MGP_PahariEiJ_G0032049)	Ubqln2 (MGP_PahariEiJ_G0032050)	Kctd12b (MGP_PahariEiJ_G0032051)	Nbdy (MGP_PahariEiJ_G0032052)
Rat	MODERN SPECIES	46	AABR07037520.1 (ENSRNOG00000047491)	Maged2 (ENSRNOG00000002449)	Itih6-ps1 (ENSRNOG00000069211)	AC115420.1 (ENSRNOG00000040249)	Gnl3l (ENSRNOG00000002509)	Fgd1 (ENSRNOG00000038970)	Tsr2 (ENSRNOG00000064917)	Wnk3 (ENSRNOG00000002537)	AABR07037412.1 (ENSRNOG00000030999)	FAM120C (ENSRNOG00000062231)	LOC100362724 (ENSRNOG00000038965)	Phf8 (ENSRNOG00000002708)	Huwe1 (ENSRNOG00000061262)	Hsd17b10 (ENSRNOG00000003049)	Ribc1 (ENSRNOG00000003081)	Smc1a (ENSRNOG00000003139) #22	Iqsec2 (ENSRNOG00000058975)	Kdm5c (ENSRNOG00000057706)	Tspyl2 (ENSRNOG00000061782)	Gpr173 (ENSRNOG00000060137)	Cldn34a (ENSRNOG00000024350)	LOC685699 (ENSRNOG00000071039)	Shroom2 (ENSRNOG00000024322)	Gpr143 (ENSRNOG00000003543)	LOC685747 (ENSRNOG00000031555)	LOC685762 (ENSRNOG00000024298)	Samt4 (ENSRNOG00000024271)	LOC685789 (ENSRNOG00000003531)	Samt2 (ENSRNOG00000070324)	Wwc3 (ENSRNOG00000024250)	Clcn4 (ENSRNOG00000003533)
Cricetidae	ANCESTRAL SPECIES	8	ENSGT00940000159912	ENSGT00530000063540.a	ENSGT00950000182835.c.c	ENSGT00940000162763	ENSGT00940000161795	ENSGT00940000162980	ENSGT00940000155877	ENSGT00940000159438	ENSGT00390000012692	ENSGT00940000160145.b	ENSGT00530000063168.a.a.b	ENSGT00940000157847.h	ENSGT00940000156319	ENSGT00940000155170	ENSGT00390000010825.a	ENSGT00940000155614 #22	ENSGT00940000159667	ENSGT00940000161236.a.a	ENSGT00980000198762	ENSGT00940000162496	ENSGT00890000139436.A.b	ENSGT00390000005717.e.a.a	ENSGT00940000155212	ENSGT00390000016722	ENSGT00410000025556.a.b	ENSGT00940000158265	ENSGT00940000155821	ENSGT00950000183119.a.e.a.d.g.a.b	ENSGT00390000004175	ENSGT00940000153904.a	ENSGT00390000009151
Cricetidae_B	ANCESTRAL SPECIES	36	ENSGT00940000159912	ENSGT00530000063540.a	ENSGT00950000182835.c.c	ENSGT00940000162763	ENSGT00940000161795	ENSGT00940000162980	ENSGT00940000155877	ENSGT00940000159438	ENSGT00390000012692	ENSGT00940000160145.b	ENSGT00530000063168.a.a.b	ENSGT00940000157847.h	ENSGT00940000156319	ENSGT00940000155170	ENSGT00390000010825.a	ENSGT00940000155614 #22	ENSGT00940000159667	ENSGT00940000161236.a.a	ENSGT00980000198762	ENSGT00940000162496	ENSGT00890000139436.A.b	ENSGT00390000005717.e.a.a	ENSGT00940000155212	ENSGT00390000016722	ENSGT00520000056155.g.b.a.f.a	ENSGT00410000025556.a.b	ENSGT00940000158265	ENSGT00940000155821	ENSGT00390000004175	ENSGT00940000153904.a	ENSGT00390000009151
Northern American deer mouse	MODERN SPECIES	475	Maged2 (ENSPEMG00000015948)	ENSPEMG00000027867	Gnl3l (ENSPEMG00000012235)	ENSPEMG00000008376	Fgd1 (ENSPEMG00000017278)	Tsr2 (ENSPEMG00000015713)	ENSPEMG00000025064	Wnk3 (ENSPEMG00000014760)	Fam120c (ENSPEMG00000012802)	Phf8 (ENSPEMG00000018201)	Huwe1 (ENSPEMG00000007064)	ENSPEMG00000006148	ENSPEMG00000003682	Hsd17b10 (ENSPEMG00000016342)	Ribc1 (ENSPEMG00000012701)	Smc1a (ENSPEMG00000003801) #22	Iqsec2 (ENSPEMG00000016485)	Kdm5c (ENSPEMG00000018041)	Kantr (ENSPEMG00000026622)	Tspyl2 (ENSPEMG00000006058)	Gpr173 (ENSPEMG00000027332)	ENSPEMG00000025543	ENSPEMG00000028842	ENSPEMG00000026567	ENSPEMG00000028039	Shroom2 (ENSPEMG00000025197)	Gpr143 (ENSPEMG00000023764)	ENSPEMG00000024517	ENSPEMG00000012532	Clcn4 (ENSPEMG00000010296)	Msl3 (ENSPEMG00000011959)
Prairie vole	MODERN SPECIES	360	ENSMOCG00000021282	Alas2 (ENSMOCG00000021931)	Apex2 (ENSMOCG00000004339)	Pfkfb1 (ENSMOCG00000017052)	ENSMOCG00000017394	Maged2 (ENSMOCG00000013159)	Gnl3l (ENSMOCG00000021622)	Fgd1 (ENSMOCG00000006370)	Tsr2 (ENSMOCG00000006662)	Wnk3 (ENSMOCG00000005941)	Fam120c (ENSMOCG00000019667)	Phf8 (ENSMOCG00000014989)	Huwe1 (ENSMOCG00000009594)	ENSMOCG00000000414	Ribc1 (ENSMOCG00000014134)	Smc1a (ENSMOCG00000016110) #22	Iqsec2 (ENSMOCG00000014030)	Kdm5c (ENSMOCG00000012222)	Tspyl2 (ENSMOCG00000017617)	Gpr173 (ENSMOCG00000000318)	Cldn34a (ENSMOCG00000006440)	Gpr143 (ENSMOCG00000012839)	ENSMOCG00000005167	Uba1 (ENSMOCG00000016465)	Rbm10 (ENSMOCG00000022485)	Ndufb11 (ENSMOCG00000013805)	ENSMOCG00000010653	Rgn (ENSMOCG00000015014)	Jade3 (ENSMOCG00000019995)	ENSMOCG00000008729	ENSMOCG00000013860
Cricetinae	ANCESTRAL SPECIES	17	ENSGT00940000163664	ENSGT00940000159912	ENSGT00530000063540.a	ENSGT00950000182835.c.c	ENSGT00940000162763	ENSGT00940000161795	ENSGT00940000155877	ENSGT00940000159438	ENSGT00390000012692	ENSGT00940000160145.b	ENSGT00530000063168.a.a.b	ENSGT00940000157847.h	ENSGT00940000156319	ENSGT00940000155170	ENSGT00390000010825.a	ENSGT00940000155614 #22	ENSGT00940000159667	ENSGT00940000164196	ENSGT00940000161236.a.a	ENSGT00940000162496	ENSGT00890000139436.A.b	ENSGT00390000005717.e.a.a	ENSGT00940000155212	ENSGT00390000016722	ENSGT00520000056155.g.a	ENSGT00410000025556.a.b	ENSGT00940000158265	ENSGT00940000155821	ENSGT00950000183119.a.e.a.d.g.a.b	ENSGT00390000004175	ENSGT00390000009151
Golden Hamster	MODERN SPECIES	824								Wnk3 (ENSMAUG00000019241)	ENSMAUG00000009529	Fam120c (ENSMAUG00000014999)	Phf8 (ENSMAUG00000017831)	ENSMAUG00000008033	Huwe1 (ENSMAUG00000015649)	Hsd17b10 (ENSMAUG00000012984)	Ribc1 (ENSMAUG00000000230)	Smc1a (ENSMAUG00000016621) #22	Iqsec2 (ENSMAUG00000017610)	ENSMAUG00000011908	Kdm5c (ENSMAUG00000010795)	Tspyl2 (ENSMAUG00000014582)	Gpr173 (ENSMAUG00000014496)	Shroom2 (ENSMAUG00000011601)	Gpr143 (ENSMAUG00000015352)	ENSMAUG00000012580
Chinese hamster chok1gshd	MODERN SPECIES	175	ENSCGRG00001021296	Alas2 (ENSCGRG00001014696)	Apex2 (ENSCGRG00001008132)	Pfkfb1 (ENSCGRG00001018740)	Tro (ENSCGRG00001020754)	Maged2 (ENSCGRG00001011051)	Gnl3l (ENSCGRG00001017459)	Fgd1 (ENSCGRG00001005494)	Tsr2 (ENSCGRG00001023321)	Wnk3 (ENSCGRG00001023390)	Fam120c (ENSCGRG00001015138)	Phf8 (ENSCGRG00001020020)	Huwe1 (ENSCGRG00001016279)	Hsd17b10 (ENSCGRG00001019853)	Ribc1 (ENSCGRG00001016624)	Smc1a (ENSCGRG00001012840) #22	Iqsec2 (ENSCGRG00001013421)	Kdm5c (ENSCGRG00001018652)	Tspyl2 (ENSCGRG00001012633)	Gpr173 (ENSCGRG00001001138)	ENSCGRG00001017961	ENSCGRG00001012119	ENSCGRG00001005259	ENSCGRG00001001026	ENSCGRG00001022825	Cldn34a (ENSCGRG00001013550)	ENSCGRG00001018136	Gpr143 (ENSCGRG00001014222)	ENSCGRG00001000328	ENSCGRG00001002782	ENSCGRG00001024000
Upper Galilee mountains blind mole rat	MODERN SPECIES	1501									Wnk3 (ENSNGAG00000018426)	Fam120c (ENSNGAG00000022457)	Phf8 (ENSNGAG00000016082)	ENSNGAG00000007342	ENSNGAG00000021250	Hsd17b10 (ENSNGAG00000017826)	Ribc1 (ENSNGAG00000006413)	Smc1a (ENSNGAG00000011200) #22	Iqsec2 (ENSNGAG00000017362)	Kdm5c (ENSNGAG00000018404)	Tspyl2 (ENSNGAG00000004977)	Gpr173 (ENSNGAG00000015260)