Mus	ANCESTRAL SPECIES	5	ENSGT01050000244900.a.a.a.a.a #8	ENSGT00390000009310 #9	ENSGT00940000163241 #10	ENSGT00940000160784 #11	ENSGT00940000154563.r #12	ENSGT00940000155199 #13	ENSGT00390000016889 #14	ENSGT00940000163751 #15	ENSGT00940000157076 #16	ENSGT00940000157586 #17	ENSGT00940000157067 #18	ENSGT00940000157365 #19	ENSGT00940000159939 #20	ENSGT00940000164079	ENSGT00940000160979 #21	ENSGT00940000159657.d #22	ENSGT01100000263518.B.b.a #23	ENSGT00940000158955 #24	ENSGT00940000160431 #25	ENSGT00390000017780.f #26	ENSGT00940000159825 #27	ENSGT00730000111186 #28	ENSGT00390000008224 #29	ENSGT00940000156637 #30	ENSGT00900000143186	ENSGT00940000156777 #31	ENSGT00440000039564.a.a #32	ENSGT01030000234588.b.a #33	ENSGT00390000005256 #34	ENSGT00940000154709.a.a #35	ENSGT00940000156735 #36
Shrew mouse	MODERN SPECIES	18	Myog (MGP_PahariEiJ_G0027853) #7	Ppfia4 (MGP_PahariEiJ_G0027854) #8	Tmem183a (MGP_PahariEiJ_G0027855) #9	Mgat4f (MGP_PahariEiJ_G0027856) #10	Cyb5r1 (MGP_PahariEiJ_G0027857) #11	Adipor1 (MGP_PahariEiJ_G0027858) #12	Klhl12 (MGP_PahariEiJ_G0027859) #13	Rabif (MGP_PahariEiJ_G0027860) #14	Mgat4e (MGP_PahariEiJ_G0027861) #15	Kdm5b (MGP_PahariEiJ_G0027862) #16	Syt2 (MGP_PahariEiJ_G0027863) #17	Ppp1r12b (MGP_PahariEiJ_G0027864) #18	Ube2t (MGP_PahariEiJ_G0027865) #19	Lgr6 (MGP_PahariEiJ_G0027866) #20	Ptpn7 (MGP_PahariEiJ_G0027867) #21	Arl8a (MGP_PahariEiJ_G0027868) #22	Gpr37l1 (MGP_PahariEiJ_G0027869) #23	Elf3 (MGP_PahariEiJ_G0027870) #24	Rnpep (MGP_PahariEiJ_G0027871) #25	Timm17a (MGP_PahariEiJ_G0027872) #26	Lmod1 (MGP_PahariEiJ_G0027873) #27	Shisa4 (MGP_PahariEiJ_G0027874) #28	Ipo9 (MGP_PahariEiJ_G0027875) #29	Nav1 (MGP_PahariEiJ_G0027876) #30	Csrp1 (MGP_PahariEiJ_G0027877) #31	Phlda3 (MGP_PahariEiJ_G0027878) #32	Tnni1 (MGP_PahariEiJ_G0027879) #33	Lad1 (MGP_PahariEiJ_G0027880) #34	Tnnt2 (MGP_PahariEiJ_G0027881) #35	Pkp1 (MGP_PahariEiJ_G0027882) #36	MGP_PahariEiJ_G0027883 #37
Mus_A	ANCESTRAL SPECIES	5	ENSGT01050000244900.a.a.a.a.a #8	ENSGT00390000009310 #9	ENSGT00940000163241 #10	ENSGT00940000160784 #11	ENSGT00940000154563.r #12	ENSGT00940000155199 #13	ENSGT00390000016889 #14	ENSGT00940000163751 #15	ENSGT00940000157076 #16	ENSGT00940000157586 #17	ENSGT00940000157067 #18	ENSGT00940000157365 #19	ENSGT00940000159939 #20	ENSGT00940000164079	ENSGT00940000160979 #21	ENSGT00940000159657.d #22	ENSGT01100000263518.B.b.a #23	ENSGT00940000158955 #24	ENSGT00940000160431 #25	ENSGT00390000017780.f.g #26	ENSGT00940000159825 #27	ENSGT00730000111186 #28	ENSGT00390000008224 #29	ENSGT00940000156637 #30	ENSGT00900000143186	ENSGT00940000156777 #31	ENSGT00440000039564.a.a #32	ENSGT01030000234588.b.a #33	ENSGT00390000005256 #34	ENSGT00940000154709.a.a #35	ENSGT00940000156735 #36
Ryukyu mouse	MODERN SPECIES		Myog (MGP_CAROLIEiJ_G0014617) #7	Ppfia4 (MGP_CAROLIEiJ_G0014618) #8	Tmem183a (MGP_CAROLIEiJ_G0014619) #9	Mgat4f (MGP_CAROLIEiJ_G0014620) #10	Cyb5r1 (MGP_CAROLIEiJ_G0014621) #11	MGP_CAROLIEiJ_G0014622 #12	Klhl12 (MGP_CAROLIEiJ_G0014623) #13	Rabif (MGP_CAROLIEiJ_G0014624) #14	MGP_CAROLIEiJ_G0014625	Kdm5b (MGP_CAROLIEiJ_G0014626) #16	Syt2 (MGP_CAROLIEiJ_G0014627) #17	Ppp1r12b (MGP_CAROLIEiJ_G0014628) #18	Ube2t (MGP_CAROLIEiJ_G0014629) #19	Lgr6 (MGP_CAROLIEiJ_G0014630) #20	Ptpn7 (MGP_CAROLIEiJ_G0014631) #21	Arl8a (MGP_CAROLIEiJ_G0014632) #22	Gpr37l1 (MGP_CAROLIEiJ_G0014633) #23	Elf3 (MGP_CAROLIEiJ_G0014634) #24	Rnpep (MGP_CAROLIEiJ_G0014635) #25	Timm17a (MGP_CAROLIEiJ_G0014636) #26	Lmod1 (MGP_CAROLIEiJ_G0014637) #27	Shisa4 (MGP_CAROLIEiJ_G0014638) #28	Ipo9 (MGP_CAROLIEiJ_G0014639) #29	Nav1 (MGP_CAROLIEiJ_G0014640) #30	Csrp1 (MGP_CAROLIEiJ_G0014641) #31	Phlda3 (MGP_CAROLIEiJ_G0014642) #32	Tnni1 (MGP_CAROLIEiJ_G0014643) #33	Lad1 (MGP_CAROLIEiJ_G0014644) #34	Tnnt2 (MGP_CAROLIEiJ_G0014645) #35	Pkp1 (MGP_CAROLIEiJ_G0014646) #36	MGP_CAROLIEiJ_G0014647 #37
Mus_B	ANCESTRAL SPECIES	7	ENSGT01050000244900.a.a.a.a.a #8	ENSGT00390000009310 #9	ENSGT00940000163241 #10	ENSGT00940000160784 #11	ENSGT00940000154563.r #12	ENSGT00940000155199 #13	ENSGT00390000016889 #14	ENSGT00940000163751 #15	ENSGT00940000157076 #16	ENSGT00940000157586 #17	ENSGT00940000157067 #18	ENSGT00940000157365 #19	ENSGT00940000159939 #20	ENSGT00940000164079	ENSGT00940000160979 #21	ENSGT00940000159657.d #22	ENSGT01100000263518.B.b.a #23	ENSGT00940000158955 #24	ENSGT00940000160431 #25	ENSGT00390000017780.f.g #26	ENSGT00940000159825 #27	ENSGT00730000111186 #28	ENSGT00390000008224 #29	ENSGT00940000156637 #30	ENSGT00900000143186	ENSGT00940000156777 #31	ENSGT00440000039564.a.a #32	ENSGT01030000234588.b.a #33	ENSGT00390000005256 #34	ENSGT00940000154709.a.a #35	ENSGT00940000156735 #36
Mus_C	ANCESTRAL SPECIES	1	ENSGT01050000244900.a.a.a.a.a #8	ENSGT00390000009310 #9	ENSGT00940000163241 #10	ENSGT00940000160784 #11	ENSGT00940000154563.r #12	ENSGT00940000155199 #13	ENSGT00390000016889 #14	ENSGT00940000163751 #15	ENSGT00940000157076 #16	ENSGT00940000157586 #17	ENSGT00940000157067 #18	ENSGT00940000157365 #19	ENSGT00940000159939 #20	ENSGT00940000164079	ENSGT00940000160979 #21	ENSGT00940000159657.d #22	ENSGT01100000263518.B.b.a #23	ENSGT00940000158955 #24	ENSGT00940000160431 #25	ENSGT00390000017780.f.g #26	ENSGT00940000159825 #27	ENSGT00730000111186 #28	ENSGT00390000008224 #29	ENSGT00940000156637 #30	ENSGT00900000143186	ENSGT00940000156777 #31	ENSGT00440000039564.a.a #32	ENSGT01030000234588.b.a #33	ENSGT00390000005256 #34	ENSGT00940000154709.a.a #35	ENSGT00940000156735 #36
spretus	MODERN SPECIES		Adora1 (MGP_SPRETEiJ_G0015423)	Myog (MGP_SPRETEiJ_G0015424) #7	Ppfia4 (MGP_SPRETEiJ_G0015425) #8	Tmem183a (MGP_SPRETEiJ_G0015426) #9	Mgat4f (MGP_SPRETEiJ_G0015427) #10	Cyb5r1 (MGP_SPRETEiJ_G0015428) #11	Adipor1 (MGP_SPRETEiJ_G0015429) #12	Klhl12 (MGP_SPRETEiJ_G0015430) #13	Rabif (MGP_SPRETEiJ_G0015431) #14	Mgat4e (MGP_SPRETEiJ_G0015432) #15	Kdm5b (MGP_SPRETEiJ_G0015433) #16	Ppp1r12b (MGP_SPRETEiJ_G0015435) #18	Ube2t (MGP_SPRETEiJ_G0015436) #19	Lgr6 (MGP_SPRETEiJ_G0015437) #20	Ptpn7 (MGP_SPRETEiJ_G0015438) #21	Arl8a (MGP_SPRETEiJ_G0015439) #22	Gpr37l1 (MGP_SPRETEiJ_G0015440) #23	Elf3 (MGP_SPRETEiJ_G0015441) #24	Rnpep (MGP_SPRETEiJ_G0015442) #25	Timm17a (MGP_SPRETEiJ_G0015443) #26	Lmod1 (MGP_SPRETEiJ_G0015444) #27	Shisa4 (MGP_SPRETEiJ_G0015445) #28	Ipo9 (MGP_SPRETEiJ_G0015446) #29	Nav1 (MGP_SPRETEiJ_G0015447) #30	Csrp1 (MGP_SPRETEiJ_G0015448) #31	Phlda3 (MGP_SPRETEiJ_G0015449) #32	Tnni1 (MGP_SPRETEiJ_G0015450) #33	Lad1 (MGP_SPRETEiJ_G0015451) #34	Tnnt2 (MGP_SPRETEiJ_G0015452) #35	Pkp1 (MGP_SPRETEiJ_G0015453) #36	MGP_SPRETEiJ_G0015454 #37
Steppe mouse	MODERN SPECIES	3299	Mgat4f (ENSMSIG00000017814) #10	ENSMSIG00000017789 #9	Cyb5r1 (ENSMSIG00000017771) #11	Adipor1 (ENSMSIG00000017739) #12	Klhl12 (ENSMSIG00000017676) #13	Mgat4e (ENSMSIG00000017668) #15	Kdm5b (ENSMSIG00000017529) #16	Syt2 (ENSMSIG00000017466) #17	Ppp1r12b (ENSMSIG00000017245) #18	ENSMSIG00000017237	Ube2t (ENSMSIG00000017228) #19	Lgr6 (ENSMSIG00000017146) #20	ENSMSIG00000017139	Ptprv (ENSMSIG00000017000)	Ptpn7 (ENSMSIG00000016967) #21	Arl8a (ENSMSIG00000016944) #22	Gpr37l1 (ENSMSIG00000016930) #23	Elf3 (ENSMSIG00000016889) #24	Rnpep (ENSMSIG00000016833) #25	ENSMSIG00000016819	Timm17a (ENSMSIG00000016796) #26	Lmod1 (ENSMSIG00000016771) #27	ENSMSIG00000016765 #28	Ipo9 (ENSMSIG00000016676) #29	ENSMSIG00000016668	ENSMSIG00000016660	Nav1 (ENSMSIG00000016388) #30	Csrp1 (ENSMSIG00000016352) #31	Phlda3 (ENSMSIG00000016346) #32	Tnni1 (ENSMSIG00000016248) #33	Lad1 (ENSMSIG00000016232) #34
Mouse	MODERN SPECIES		Ppfia4 (ENSMUSG00000026458) #8	Tmem183a (ENSMUSG00000042305) #9	Mgat4f (ENSMUSG00000050526) #10	Cyb5r1 (ENSMUSG00000026456) #11	Adipor1 (ENSMUSG00000026457) #12	Klhl12 (ENSMUSG00000026455) #13	Rabif (ENSMUSG00000042229) #14	Mgat4e (ENSMUSG00000046367) #15	Kdm5b (ENSMUSG00000042207) #16	Syt2 (ENSMUSG00000026452) #17	Ppp1r12b (ENSMUSG00000073557) #18	Ube2t (ENSMUSG00000026429) #19	Lgr6 (ENSMUSG00000042793) #20	Ptprv (ENSMUSG00000097993)	Ptpn7 (ENSMUSG00000031506) #21	Arl8a (ENSMUSG00000026426) #22	Gpr37l1 (ENSMUSG00000026424) #23	Elf3 (ENSMUSG00000003051) #24	Rnpep (ENSMUSG00000041926) #25	Timm17a (ENSMUSG00000062580) #26	Lmod1 (ENSMUSG00000048096) #27	Shisa4 (ENSMUSG00000041889) #28	Ipo9 (ENSMUSG00000041879) #29	Nav1 (ENSMUSG00000009418) #30	Csrp1 (ENSMUSG00000026421) #31	Phlda3 (ENSMUSG00000041801) #32	Tnni1 (ENSMUSG00000026418) #33	Lad1 (ENSMUSG00000041782) #34	Tnnt2 (ENSMUSG00000026414) #35	Pkp1 (ENSMUSG00000026413) #36	Igfn1 (ENSMUSG00000051985) #37