Tetrapoda	ANCESTRAL SPECIES	18	ENSGT00940000154570.b	ENSGT00390000009278	ENSGT00940000154171.A	ENSGT00390000012058.c.b	ENSGT00940000160362	ENSGT00390000014577.b	ENSGT00390000004248	ENSGT00950000182834.C	ENSGT00500000044947	ENSGT00940000165031	ENSGT00940000154721	ENSGT00940000153341.b	ENSGT00940000165186.C	ENSGT00940000158624	ENSGT00940000158725	ENSGT00390000003084 #22	ENSGT00530000064721	ENSGT00940000153675.a.b	ENSGT00940000153675.a.a.a.b	ENSGT00940000159654
Amniota	ANCESTRAL SPECIES	21					ENSGT00940000160362	ENSGT00390000014577.b	ENSGT00390000004248	ENSGT00950000182834.C	ENSGT00940000165031	ENSGT00940000154721	ENSGT00940000153341.b	ENSGT00940000165186.A	ENSGT00940000165186.C	ENSGT00940000158624	ENSGT00940000158725	ENSGT00390000003084 #22	ENSGT00940000153675.a.a.a.b	ENSGT00940000159654	ENSGT00930000151052	ENSGT00940000160469	ENSGT00940000162143	ENSGT00940000161227	ENSGT00940000161091	ENSGT00940000155503	ENSGT00450000040404.a	ENSGT00940000154436.a	ENSGT00940000154436.b	ENSGT00940000156792 #29	ENSGT00940000160840	ENSGT00950000182858.C	ENSGT00940000156275
Mammalia	ANCESTRAL SPECIES	124						ENSGT00940000160362	ENSGT00390000014577.b	ENSGT00390000004248	ENSGT00950000182834.C	ENSGT00940000165031	ENSGT00940000154721	ENSGT00940000153341.b	ENSGT00940000165186.C	ENSGT00940000158624	ENSGT00940000158725	ENSGT00390000003084 #22	ENSGT00940000154169.B #23	ENSGT00390000006113 #24	ENSGT00940000160531 #26	ENSGT00940000161958 #27
Theria	ANCESTRAL SPECIES	63	ENSGT00940000161401	ENSGT00950000183053.A	ENSGT00940000157218.C	ENSGT00940000154436.b	ENSGT00940000154436.a	ENSGT00940000160362	ENSGT00390000014577.b	ENSGT00390000004248	ENSGT00950000182834.C	ENSGT00390000007816	ENSGT00940000154721	ENSGT00940000153341.b	ENSGT00940000165186.C	ENSGT00940000158624	ENSGT00940000158725	ENSGT00390000003084 #22	ENSGT00940000154169.B #23	ENSGT00390000006113 #24	ENSGT00940000160531 #26	ENSGT00940000161958 #27	ENSGT00940000156792 #29	ENSGT00940000160928	ENSGT01090000260044.A.a.b.a.b	ENSGT01090000260044.A.a.b.a.a.a.b
Eutheria	ANCESTRAL SPECIES		ENSGT00950000183053.A	ENSGT00940000157218.C	ENSGT00940000154436.b	ENSGT00940000154436.a	ENSGT00940000160362	ENSGT00390000014577.b	ENSGT00390000004248	ENSGT00950000182834.C	ENSGT00390000000654	ENSGT00940000167024	ENSGT00390000007816	ENSGT00940000154721	ENSGT00940000153341.b.p.a.a	ENSGT00940000158624	ENSGT00940000158725	ENSGT00390000003084 #22	ENSGT00940000154169.B #23	ENSGT00390000006113 #24	ENSGT00940000160531 #26	ENSGT00940000161958 #27	ENSGT00940000156792 #29	ENSGT00940000160928	ENSGT01090000260044.A.a.b.a.b	ENSGT01090000260044.A.a.b.a.a.a.a.b	ENSGT01090000260044.A.a.b.a.a.a.a.a.b	ENSGT01090000260044.A.a.b.a.a.a.b	ENSGT01090000260044.A.a.b.a.a.b	ENSGT01090000260044.A.a.b.a.a.a.a.a.a.b	ENSGT00390000006224 #30	ENSGT00390000014984 #31	ENSGT00620000088018.h #32
Boreoeutheria	ANCESTRAL SPECIES		ENSGT00970000194001	ENSGT00940000154436.b	ENSGT00940000154436.a	ENSGT00940000160362	ENSGT00390000014577.b	ENSGT00390000004248	ENSGT00950000182834.C	ENSGT00390000000654	ENSGT00940000167024	ENSGT00390000007816	ENSGT00700000105447	ENSGT00940000154721	ENSGT00940000153341.b.p.a.a	ENSGT00940000158624	ENSGT00940000158725	ENSGT00390000003084 #22	ENSGT00940000154169.B #23	ENSGT00390000006113 #24	ENSGT00940000160531 #26	ENSGT00940000161958 #27	ENSGT00940000156792 #29	ENSGT00940000160928	ENSGT01090000260044.A.a.b.a.b	ENSGT01090000260044.A.a.b.a.a.a.a.a.a.a	ENSGT01090000260044.A.a.b.a.a.a.a.b	ENSGT01090000260044.A.a.b.a.a.a.a.a.b	ENSGT01090000260044.A.a.b.a.a.a.b	ENSGT01090000260044.A.a.b.a.a.b	ENSGT01090000260044.A.a.b.a.a.a.a.a.a.b	ENSGT00390000006224 #30	ENSGT00390000014984 #31
Euarchontoglires	ANCESTRAL SPECIES		ENSGT00940000157218.C	ENSGT00970000194001	ENSGT00940000154436.b	ENSGT00940000154436.a	ENSGT00940000160362	ENSGT00390000014577.b	ENSGT00390000004248	ENSGT00950000182834.C	ENSGT00390000000654	ENSGT00390000007816	ENSGT00700000105447	ENSGT00940000154721	ENSGT00940000153341.b.p.a.a.a	ENSGT00940000158624	ENSGT00940000158725	ENSGT00390000003084 #22	ENSGT00940000154169.B #23	ENSGT00390000006113 #24	ENSGT00940000160531 #26	ENSGT00940000161958 #27	ENSGT00940000156792 #29	ENSGT00940000160928	ENSGT01090000260044.A.a.b.a.b	ENSGT01090000260044.A.a.b.a.a.a.a.a.a.a	ENSGT01090000260044.A.a.b.a.a.a.a.b	ENSGT01090000260044.A.a.b.a.a.a.a.a.b	ENSGT01090000260044.A.a.b.a.a.a.b	ENSGT01090000260044.A.a.b.a.a.b	ENSGT01090000260044.A.a.b.a.a.a.a.a.a.b	ENSGT00390000006224 #30	ENSGT00390000014984 #31
Primates	ANCESTRAL SPECIES	4	ENSGT00940000161401	ENSGT00950000183053.A	ENSGT00940000157218.C	ENSGT00970000194001	ENSGT00940000154436.b	ENSGT00940000154436.a	ENSGT00940000160362	ENSGT00390000014577.b	ENSGT00390000004248	ENSGT00950000182834.C	ENSGT00390000007816	ENSGT00940000154721	ENSGT00940000153341.b.p.a.a.a	ENSGT00940000158624	ENSGT00940000158725	ENSGT00390000003084 #22	ENSGT00940000154169.B #23	ENSGT00390000006113 #24	ENSGT00940000160531 #26	ENSGT00940000161958 #27	ENSGT00940000156792 #29	ENSGT00940000160928	ENSGT01090000260044.A.a.b.a.b	ENSGT00390000006224 #30	ENSGT00390000014984 #31	ENSGT00620000088018.h #32	ENSGT01030000235036	ENSGT00390000003015 #33	ENSGT00510000048988 #34	ENSGT00940000157693 #35	ENSGT00940000161225 #36
Haplorrhini	ANCESTRAL SPECIES	1	ENSGT00940000161401	ENSGT00950000183053.A	ENSGT00940000157218.C	ENSGT00970000194001	ENSGT00940000154436.b	ENSGT00940000154436.a	ENSGT00940000160362	ENSGT00390000014577.b	ENSGT00390000004248	ENSGT00950000182834.C	ENSGT00390000007816	ENSGT00940000154721	ENSGT00940000153341.b.p.a.a.a	ENSGT00940000158624	ENSGT00940000158725	ENSGT00390000003084 #22	ENSGT00940000154169.B #23	ENSGT00390000006113 #24	ENSGT00940000160531 #26	ENSGT00940000161958 #27	ENSGT00940000156792 #29	ENSGT00390000006224 #30	ENSGT00390000014984 #31	ENSGT00620000088018.h #32	ENSGT01030000235036	ENSGT00390000003015 #33	ENSGT00510000048988 #34	ENSGT00940000157693 #35	ENSGT00940000161225 #36	ENSGT00950000183104.A.a.a #37	ENSGT01050000244838.H.d
Simiiformes	ANCESTRAL SPECIES	3	ENSGT00940000161401	ENSGT00950000183053.A	ENSGT00940000157218.C	ENSGT00970000194001	ENSGT00940000154436.b	ENSGT00940000154436.a	ENSGT00940000160362	ENSGT00390000014577.b	ENSGT00390000004248	ENSGT00950000182834.C	ENSGT00390000007816	ENSGT00940000154721	ENSGT00940000153341.b.p.a.a.a	ENSGT00940000158624	ENSGT00940000158725	ENSGT00390000003084 #22	ENSGT00940000154169.B #23	ENSGT00390000006113 #24	ENSGT01050000245314	ENSGT00940000160531 #26	ENSGT00910000147271 #25	ENSGT00940000161958 #27	ENSGT00940000156792 #29	ENSGT00390000006224.i.a #30	ENSGT00390000014984 #31	ENSGT00620000088018.h #32	ENSGT01030000235036	ENSGT00390000003015 #33	ENSGT00510000048988 #34	ENSGT00940000157693 #35	ENSGT00940000161225 #36
Catarrhini	ANCESTRAL SPECIES	3	ENSGT00940000161401	ENSGT00950000183053.A	ENSGT00940000157218.C	ENSGT00970000194001	ENSGT00940000154436.b	ENSGT00940000154436.a	ENSGT00940000160362	ENSGT00390000014577.b	ENSGT00390000004248	ENSGT00950000182834.C	ENSGT00390000007816	ENSGT00940000154721	ENSGT00940000153341.b.p.a.a.a	ENSGT00940000158624	ENSGT00940000158725	ENSGT00390000003084 #22	ENSGT00940000154169.B #23	ENSGT00390000006113 #24	ENSGT01050000245314	ENSGT00940000160531 #26	ENSGT00910000147271 #25	ENSGT00940000161958 #27	ENSGT00940000156792 #29	ENSGT00390000006224.i.a #30	ENSGT00390000014984 #31	ENSGT00620000088018.h #32	ENSGT01030000235036	ENSGT00390000003015 #33	ENSGT00510000048988 #34	ENSGT00940000157693 #35	ENSGT00940000161225 #36
Cercopithecidae	ANCESTRAL SPECIES	2	ENSGT00940000157999	ENSGT00940000161401	ENSGT00950000183053.A	ENSGT00940000157218.C	ENSGT00940000154436.b	ENSGT00940000154436.a	ENSGT00940000160362	ENSGT00390000014577.b	ENSGT00390000004248	ENSGT00950000182834.C	ENSGT00390000007816	ENSGT00940000154721	ENSGT00940000153341.b.p.a.a.a	ENSGT00940000158624	ENSGT00940000158725	ENSGT00390000003084 #22	ENSGT00940000154169.B #23	ENSGT00390000006113 #24	ENSGT01050000245314	ENSGT00940000160531 #26	ENSGT00910000147271 #25	ENSGT00940000161958 #27	ENSGT00940000156792 #29	ENSGT00390000006224.i.a #30	ENSGT00390000014984 #31	ENSGT00620000088018.h #32	ENSGT01030000235036	ENSGT00390000003015 #33	ENSGT00510000048988 #34	ENSGT00940000157693 #35	ENSGT00940000161225 #36
Rhinopithecus	ANCESTRAL SPECIES	76	ENSGT00940000157999	ENSGT00940000161401	ENSGT00950000183053.A	ENSGT00940000157218.C	ENSGT00940000154436.b	ENSGT00940000154436.a	ENSGT00940000160362	ENSGT00390000014577.b	ENSGT00390000004248	ENSGT00950000182834.C	ENSGT00390000007816	ENSGT00940000154721	ENSGT00940000153341.b.p.a.a.a.w	ENSGT00940000158624	ENSGT00940000158725	ENSGT00390000003084 #22	ENSGT00940000154169.B #23	ENSGT00390000006113 #24	ENSGT00940000160531 #26	ENSGT00910000147271 #25	ENSGT00940000161958 #27	ENSGT00390000002730.c.a #28	ENSGT00940000162050	ENSGT00940000160360	ENSGT00950000182802.A.a.a.e.a.b
Black snub-nosed monkey	MODERN SPECIES	693																C1orf50 (ENSRBIG00000029968) #22	ENSRBIG00000034475 #23	SVBP (ENSRBIG00000034151) #24	ENSRBIG00000043474 #25	ERMAP (ENSRBIG00000037168) #26	ZNF691 (ENSRBIG00000033241) #27	ENSRBIG00000044862 #28	SLC2A1 (ENSRBIG00000034064) #29	CFAP144 (ENSRBIG00000012498) #30	EBNA1BP2 (ENSRBIG00000034587) #31	CFAP57 (ENSRBIG00000025409) #32	TMEM125 (ENSRBIG00000014977) #33	C1orf210 (ENSRBIG00000036870) #34	TIE1 (ENSRBIG00000017224) #35	MPL (ENSRBIG00000037132) #36	CDC20 (ENSRBIG00000015515) #37
Golden snub-nosed monkey	MODERN SPECIES	1630				GUCA2B (ENSRROG00000032199)	GUCA2A (ENSRROG00000020496)	FOXJ3 (ENSRROG00000001301)	RIMKLA (ENSRROG00000029394)	ZMYND12 (ENSRROG00000032381)	PPCS (ENSRROG00000017918)	CCDC30 (ENSRROG00000031908)	ENSRROG00000020866	PPIH (ENSRROG00000044177)	ENSRROG00000032663	CLDN19 (ENSRROG00000041438)	P3H1 (ENSRROG00000038286)	C1orf50 (ENSRROG00000041151) #22	ENSRROG00000039617 #23	SVBP (ENSRROG00000040670) #24	ERMAP (ENSRROG00000045082) #26	ENSRROG00000043754 #25	ZNF691 (ENSRROG00000031294) #27	ENSRROG00000033231 #28	SLC2A1 (ENSRROG00000037496) #29	CFAP144 (ENSRROG00000012345) #30	EBNA1BP2 (ENSRROG00000012178) #31	CFAP57 (ENSRROG00000019730) #32	TMEM125 (ENSRROG00000012100) #33	C1orf210 (ENSRROG00000029303) #34	TIE1 (ENSRROG00000040902) #35	MPL (ENSRROG00000044606) #36	ENSRROG00000000388
Cercopithecinae	ANCESTRAL SPECIES		ENSGT00940000157999	ENSGT00940000161401	ENSGT00950000183053.A	ENSGT00940000157218.C	ENSGT00940000154436.b	ENSGT00940000154436.a	ENSGT00940000160362	ENSGT00390000014577.b	ENSGT00390000004248	ENSGT00950000182834.C	ENSGT00390000007816	ENSGT00940000154721	ENSGT00940000153341.b.p.a.a.a	ENSGT00940000158624	ENSGT00940000158725	ENSGT00390000003084 #22	ENSGT00940000154169.B #23	ENSGT00390000006113 #24	ENSGT01050000245314	ENSGT00940000160531 #26	ENSGT00910000147271 #25	ENSGT00940000161958 #27	ENSGT00940000156792 #29	ENSGT00390000006224.i.a #30	ENSGT00390000014984 #31	ENSGT00620000088018.h #32	ENSGT01030000235036	ENSGT00390000003015 #33	ENSGT00510000048988 #34	ENSGT00940000157693 #35	ENSGT00940000161225 #36
Vervet Monkey	MODERN SPECIES	12	SCMH1 (ENSCSAG00000001156)	FOXO6 (ENSCSAG00000001157)	EDN2 (ENSCSAG00000001158)	HIVEP3 (ENSCSAG00000001159)	GUCA2B (ENSCSAG00000001160)	GUCA2A (ENSCSAG00000001161)	FOXJ3 (ENSCSAG00000001162)	RIMKLA (ENSCSAG00000001163)	ZMYND12 (ENSCSAG00000001164)	PPCS (ENSCSAG00000001165)	CCDC30 (ENSCSAG00000001166)	PPIH (ENSCSAG00000001167)	ENSCSAG00000001168	CLDN19 (ENSCSAG00000001169)	P3H1 (ENSCSAG00000001170)	C1orf50 (ENSCSAG00000001171) #22	SVBP (ENSCSAG00000001172) #24	ERMAP (ENSCSAG00000001173) #26	ZNF691 (ENSCSAG00000001174) #27	SLC2A1 (ENSCSAG00000001175) #29	CFAP144 (ENSCSAG00000001176) #30	EBNA1BP2 (ENSCSAG00000001177) #31	CFAP57 (ENSCSAG00000001178) #32	TMEM125 (ENSCSAG00000000139) #33	C1orf210 (ENSCSAG00000001179) #34	TIE1 (ENSCSAG00000001180) #35	MPL (ENSCSAG00000001181) #36	CDC20 (ENSCSAG00000001182) #37	MED8 (ENSCSAG00000001183)	HYI (ENSCSAG00000001184)	SZT2 (ENSCSAG00000001185)
Cercopithecinae_a	ANCESTRAL SPECIES		ENSGT00940000157218.C	ENSGT00940000154436.b	ENSGT00940000154436.a	ENSGT00940000160362	ENSGT00390000014577.b	ENSGT00940000171057	ENSGT00390000004248	ENSGT00950000182834.C	ENSGT00390000007816	ENSGT00390000000566.r.b.b.b	ENSGT00940000154721	ENSGT00940000153341.b.p.a.b.b.b.b.h	ENSGT00940000153341.b.p.a.a.a	ENSGT00940000158624	ENSGT00940000158725	ENSGT00390000003084 #22	ENSGT00940000154169.B #23	ENSGT00390000006113 #24	ENSGT01050000245314	ENSGT00940000160531 #26	ENSGT00910000147271 #25	ENSGT00940000161958 #27	ENSGT00390000002730.c.a.v.b #28	ENSGT00940000156792 #29	ENSGT00390000006224.i.a #30	ENSGT00390000014984 #31	ENSGT00620000088018.h #32	ENSGT01030000235036	ENSGT00390000003015 #33	ENSGT00510000048988 #34	ENSGT00940000157693 #35
Cercopithecinae_b	ANCESTRAL SPECIES	1	ENSGT00940000157218.C	ENSGT00940000154436.b	ENSGT00940000154436.a	ENSGT00940000160362	ENSGT00390000014577.b	ENSGT00940000171057	ENSGT00390000004248	ENSGT00950000182834.C	ENSGT00390000007816	ENSGT00390000000566.r.b.b.b	ENSGT00940000154721	ENSGT00940000153341.b.p.a.b.b.b.b.h	ENSGT00940000153341.b.p.a.a.a	ENSGT00940000158624	ENSGT00940000158725	ENSGT00390000003084 #22	ENSGT00940000154169.B #23	ENSGT00390000006113 #24	ENSGT01050000245314	ENSGT00940000160531 #26	ENSGT00910000147271 #25	ENSGT00940000161958 #27	ENSGT00390000002730.c.a.v.b #28	ENSGT00940000156792 #29	ENSGT00390000006224.i.a #30	ENSGT00390000014984 #31	ENSGT00620000088018.h #32	ENSGT00390000003015 #33	ENSGT00510000048988 #34	ENSGT00940000157693 #35	ENSGT00940000161225 #36
Olive baboon	MODERN SPECIES		HIVEP3 (ENSPANG00000010311)	ENSPANG00000049139	ENSPANG00000038401	GUCA2B (ENSPANG00000006448)	GUCA2A (ENSPANG00000008252)	FOXJ3 (ENSPANG00000004657)	RIMKLA (ENSPANG00000009482)	ZMYND12 (ENSPANG00000007738)	PPCS (ENSPANG00000035463)	CCDC30 (ENSPANG00000003497)	ENSPANG00000036064	PPIH (ENSPANG00000006391)	YBX1 (ENSPANG00000013156)	CLDN19 (ENSPANG00000012914)	P3H1 (ENSPANG00000024088)	C1orf50 (ENSPANG00000024744) #22	ENSPANG00000005202 #23	SVBP (ENSPANG00000000949) #24	ERMAP (ENSPANG00000000950) #26	ZNF691 (ENSPANG00000009481) #27	SLC2A1 (ENSPANG00000006390) #29	CFAP144 (ENSPANG00000030278) #30	EBNA1BP2 (ENSPANG00000015351) #31	CFAP57 (ENSPANG00000001327) #32	TMEM125 (ENSPANG00000013715) #33	C1orf210 (ENSPANG00000038143) #34	TIE1 (ENSPANG00000007872) #35	MPL (ENSPANG00000009479) #36	CDC20 (ENSPANG00000020759) #37	ELOVL1 (ENSPANG00000025281)	MED8 (ENSPANG00000031989)
Cercopithecinae_d	ANCESTRAL SPECIES	1	ENSGT00950000183053.A	ENSGT00940000157218.C	ENSGT00940000154436.b	ENSGT00940000154436.a	ENSGT00940000160362	ENSGT00390000014577.b	ENSGT00940000171057	ENSGT00390000004248	ENSGT00950000182834.C	ENSGT00390000007816	ENSGT00390000000566.r.b.b.b	ENSGT00940000154721	ENSGT00940000153341.b.p.a.a.a	ENSGT00940000158624	ENSGT00940000158725	ENSGT00390000003084 #22	ENSGT00940000154169.B #23	ENSGT00390000006113 #24	ENSGT01050000245314	ENSGT00940000160531 #26	ENSGT00910000147271 #25	ENSGT00940000161958 #27	ENSGT00390000002730.c.a.v.b #28	ENSGT00940000156792 #29	ENSGT00390000006224.i.a #30	ENSGT00390000014984 #31	ENSGT00620000088018.h #32	ENSGT00390000003015 #33	ENSGT00510000048988 #34	ENSGT00940000157693 #35	ENSGT00940000161225 #36
Drill	MODERN SPECIES	1397	EDN2 (ENSMLEG00000043630)	HIVEP3 (ENSMLEG00000040671)	GUCA2B (ENSMLEG00000036630)	GUCA2A (ENSMLEG00000044366)	FOXJ3 (ENSMLEG00000033176)	RIMKLA (ENSMLEG00000030974)	ENSMLEG00000034580	ZMYND12 (ENSMLEG00000036839)	PPCS (ENSMLEG00000043931)	CCDC30 (ENSMLEG00000032369)	ENSMLEG00000042623	PPIH (ENSMLEG00000029287)	ENSMLEG00000012973	CLDN19 (ENSMLEG00000044227)	P3H1 (ENSMLEG00000034003)	C1orf50 (ENSMLEG00000036185) #22	ENSMLEG00000039650 #23	SVBP (ENSMLEG00000029896) #24	ENSMLEG00000035995	ERMAP (ENSMLEG00000026038) #26	ENSMLEG00000043932 #25	ZNF691 (ENSMLEG00000032883) #27	ENSMLEG00000037786 #28	SLC2A1 (ENSMLEG00000017327) #29	CFAP144 (ENSMLEG00000012458) #30	EBNA1BP2 (ENSMLEG00000028431) #31	CFAP57 (ENSMLEG00000043848) #32	C1orf210 (ENSMLEG00000042281) #34	TIE1 (ENSMLEG00000032399) #35	MPL (ENSMLEG00000021415) #36	CDC20 (ENSMLEG00000037879) #37
Sooty mangabey	MODERN SPECIES	227	EDN2 (ENSCATG00000033771)	HIVEP3 (ENSCATG00000032016)	GUCA2B (ENSCATG00000035261)	GUCA2A (ENSCATG00000031405)	FOXJ3 (ENSCATG00000033279)	ENSCATG00000003873	ENSCATG00000033575	RIMKLA (ENSCATG00000036202)	ZMYND12 (ENSCATG00000033516)	PPCS (ENSCATG00000019818)	CCDC30 (ENSCATG00000030952)	PPIH (ENSCATG00000015048)	YBX1 (ENSCATG00000016344)	CLDN19 (ENSCATG00000015763)	P3H1 (ENSCATG00000021814)	C1orf50 (ENSCATG00000017667) #22	ENSCATG00000031680 #23	SVBP (ENSCATG00000009841) #24	ENSCATG00000043328 #25	ERMAP (ENSCATG00000034022) #26	ZNF691 (ENSCATG00000015841) #27	ENSCATG00000009580 #28	SLC2A1 (ENSCATG00000032318) #29	CFAP144 (ENSCATG00000006744) #30	EBNA1BP2 (ENSCATG00000037761) #31	CFAP57 (ENSCATG00000027570) #32	TMEM125 (ENSCATG00000004863) #33	C1orf210 (ENSCATG00000003667) #34	TIE1 (ENSCATG00000010483) #35	MPL (ENSCATG00000003768) #36	CDC20 (ENSCATG00000028233) #37
Macaca	ANCESTRAL SPECIES		ENSGT00950000183053.A	ENSGT00940000157218.C	ENSGT00940000154436.b	ENSGT00940000154436.a	ENSGT00940000160362	ENSGT00390000014577.b	ENSGT00940000171057	ENSGT00390000004248	ENSGT00950000182834.C	ENSGT00390000007816	ENSGT00390000000566.r.b.b.b	ENSGT00940000154721	ENSGT00940000153341.b.p.a.a.a	ENSGT00940000158624	ENSGT00940000158725	ENSGT00390000003084 #22	ENSGT00940000154169.B #23	ENSGT00390000006113 #24	ENSGT01050000245314	ENSGT00940000160531 #26	ENSGT00910000147271 #25	ENSGT00940000161958 #27	ENSGT00390000002730.c.a.v.b #28	ENSGT00940000156792 #29	ENSGT00390000006224.i.a #30	ENSGT00390000014984 #31	ENSGT00620000088018.h #32	ENSGT01030000235036	ENSGT00390000003015 #33	ENSGT00510000048988 #34	ENSGT00940000157693 #35
Pig-tailed macaque	MODERN SPECIES	217	EDN2 (ENSMNEG00000036928)	HIVEP3 (ENSMNEG00000023810)	GUCA2B (ENSMNEG00000043147)	GUCA2A (ENSMNEG00000030506)	FOXJ3 (ENSMNEG00000035486)	RIMKLA (ENSMNEG00000038583)	ENSMNEG00000043181	ZMYND12 (ENSMNEG00000045144)	PPCS (ENSMNEG00000040668)	CCDC30 (ENSMNEG00000043013)	ENSMNEG00000040479	PPIH (ENSMNEG00000044023)	ENSMNEG00000044209	CLDN19 (ENSMNEG00000034932)	P3H1 (ENSMNEG00000028256)	C1orf50 (ENSMNEG00000026823) #22	ENSMNEG00000041211 #23	SVBP (ENSMNEG00000045446) #24	ENSMNEG00000034367	ERMAP (ENSMNEG00000037868) #26	ENSMNEG00000009242 #25	ZNF691 (ENSMNEG00000007461) #27	ENSMNEG00000032332 #28	SLC2A1 (ENSMNEG00000035273) #29	ENSMNEG00000005715	EBNA1BP2 (ENSMNEG00000029376) #31	CFAP57 (ENSMNEG00000014927) #32	TMEM125 (ENSMNEG00000014041) #33	C1orf210 (ENSMNEG00000044991) #34	TIE1 (ENSMNEG00000027550) #35	MPL (ENSMNEG00000043321) #36
Macaca_a	ANCESTRAL SPECIES		ENSGT00940000157999	ENSGT00940000161401	ENSGT00950000183053.A	ENSGT00940000157218.C	ENSGT00940000154436.b	ENSGT00940000154436.a	ENSGT00940000160362	ENSGT00390000014577.b	ENSGT00390000004248	ENSGT00950000182834.C	ENSGT00390000007816	ENSGT00940000154721	ENSGT00940000153341.b.p.a.b.b.b.b.h	ENSGT00940000158624	ENSGT00940000158725	ENSGT00390000003084 #22	ENSGT00940000154169.B #23	ENSGT00390000006113 #24	ENSGT00940000160531 #26	ENSGT00940000161958 #27	ENSGT00940000156792 #29	ENSGT00390000006224.i.a #30	ENSGT00390000014984 #31	ENSGT00620000088018.h #32	ENSGT01030000235036	ENSGT00390000003015 #33	ENSGT00510000048988 #34	ENSGT00940000157693 #35	ENSGT00940000161225 #36	ENSGT00950000183104.A.a.a #37	ENSGT00390000011838
Rhesus	MODERN SPECIES		ENSMMUG00000052393	ENSMMUG00000049561	ENSMMUG00000052537	GUCA2B (ENSMMUG00000018965)	GUCA2A (ENSMMUG00000055703)	FOXJ3 (ENSMMUG00000014138)	RIMKLA (ENSMMUG00000051992)	ENSMMUG00000055029	ZMYND12 (ENSMMUG00000001034)	PPCS (ENSMMUG00000013126)	CCDC30 (ENSMMUG00000013128)	PPIH (ENSMMUG00000013129)	YBX1 (ENSMMUG00000013136)	CLDN19 (ENSMMUG00000057076)	P3H1 (ENSMMUG00000022381)	C1H1orf50 (ENSMMUG00000016111) #22	ENSMMUG00000056187 #23	SVBP (ENSMMUG00000059313) #24	ERMAP (ENSMMUG00000047471) #26	ZNF691 (ENSMMUG00000055744) #27	SLC2A1 (ENSMMUG00000000373) #29	CFAP144 (ENSMMUG00000049986) #30	EBNA1BP2 (ENSMMUG00000051576) #31	CFAP57 (ENSMMUG00000002642) #32	ENSMMUG00000063485	TMEM125 (ENSMMUG00000012766) #33	C1H1orf210 (ENSMMUG00000061990) #34	TIE1 (ENSMMUG00000010660) #35	MPL (ENSMMUG00000003148) #36	CDC20 (ENSMMUG00000003149) #37	MED8 (ENSMMUG00000023671)
Crab-eating macaque	MODERN SPECIES		FOXO6 (ENSMFAG00000032820)	EDN2 (ENSMFAG00000036352)	HIVEP3 (ENSMFAG00000041340)	GUCA2B (ENSMFAG00000038173)	GUCA2A (ENSMFAG00000031471)	FOXJ3 (ENSMFAG00000034559)	RIMKLA (ENSMFAG00000044165)	ENSMFAG00000057407	ZMYND12 (ENSMFAG00000002741)	PPCS (ENSMFAG00000040979)	CCDC30 (ENSMFAG00000038143)	PPIH (ENSMFAG00000047206)	ENSMFAG00000065677	CLDN19 (ENSMFAG00000019445)	P3H1 (ENSMFAG00000042833)	C1orf50 (ENSMFAG00000034667) #22	ENSMFAG00000040274 #23	SVBP (ENSMFAG00000056796) #24	ERMAP (ENSMFAG00000025183) #26	ZNF691 (ENSMFAG00000002872) #27	SLC2A1 (ENSMFAG00000031833) #29	ENSMFAG00000059717	CFAP144 (ENSMFAG00000032517) #30	EBNA1BP2 (ENSMFAG00000037826) #31	CFAP57 (ENSMFAG00000040741) #32	TMEM125 (ENSMFAG00000061336) #33	C1orf210 (ENSMFAG00000003586) #34	TIE1 (ENSMFAG00000002847) #35	MPL (ENSMFAG00000015202) #36	CDC20 (ENSMFAG00000001542) #37	MED8 (ENSMFAG00000042006)
Hominoidea	ANCESTRAL SPECIES	3	ENSGT00940000161401	ENSGT00950000183053.A	ENSGT00940000157218.C	ENSGT00970000194001	ENSGT00940000154436.b	ENSGT00940000154436.a	ENSGT00940000160362	ENSGT00390000014577.b	ENSGT00390000004248	ENSGT00950000182834.C	ENSGT00390000007816	ENSGT00940000154721	ENSGT00940000153341.b.p.a.b.b.b.b.h	ENSGT00940000158624	ENSGT00940000158725	ENSGT00390000003084 #22	ENSGT00940000154169.B #23	ENSGT00390000006113 #24	ENSGT01050000245314	ENSGT00940000160531 #26	ENSGT00910000147271 #25	ENSGT00940000161958 #27	ENSGT00940000156792 #29	ENSGT00390000006224.i.a #30	ENSGT00390000014984 #31	ENSGT00620000088018.h #32	ENSGT00390000003015 #33	ENSGT00510000048988 #34	ENSGT00940000157693 #35	ENSGT00940000161225 #36	ENSGT00950000183104.A.a.a #37
Gibbon	MODERN SPECIES	2	SLFNL1 (ENSNLEG00000012253)	SCMH1 (ENSNLEG00000012259)	EDN2 (ENSNLEG00000012277)	HIVEP3 (ENSNLEG00000012279)	GUCA2B (ENSNLEG00000012283)	ENSNLEG00000012285	FOXJ3 (ENSNLEG00000012288)	RIMKLA (ENSNLEG00000012292)	ZMYND12 (ENSNLEG00000012297)	PPCS (ENSNLEG00000012303)	ENSNLEG00000012311	PPIH (ENSNLEG00000012313)	YBX1 (ENSNLEG00000012324)	ENSNLEG00000012336	ENSNLEG00000012339	ENSNLEG00000012344 #22	ENSNLEG00000032878 #23	SVBP (ENSNLEG00000028933) #24	ERMAP (ENSNLEG00000012347) #26	ENSNLEG00000030318 #25	ZNF691 (ENSNLEG00000035487) #27	SLC2A1 (ENSNLEG00000012357) #29	ENSNLEG00000029537	ENSNLEG00000007818	ENSNLEG00000029107	CFAP144 (ENSNLEG00000013230) #30	ENSNLEG00000013236 #31	CFAP57 (ENSNLEG00000013251) #32	TIE1 (ENSNLEG00000013277) #35	ENSNLEG00000013413 #36	CDC20 (ENSNLEG00000013419) #37
Hominidae	ANCESTRAL SPECIES	3	ENSGT00940000161401	ENSGT00950000183053.A	ENSGT00940000157218.C	ENSGT00970000194001	ENSGT00940000154436.b	ENSGT00940000154436.a	ENSGT00940000160362	ENSGT00390000014577.b	ENSGT00390000004248	ENSGT00950000182834.C	ENSGT00390000007816	ENSGT00940000154721	ENSGT00940000153341.b.p.a.b.b.b.b.h	ENSGT00940000158624	ENSGT00940000158725	ENSGT00390000003084 #22	ENSGT00940000154169.B #23	ENSGT00390000006113 #24	ENSGT01050000245314	ENSGT00940000160531 #26	ENSGT00910000147271 #25	ENSGT00940000161958 #27	ENSGT00940000156792 #29	ENSGT00390000006224.i.a #30	ENSGT00390000014984 #31	ENSGT00620000088018.h #32	ENSGT00390000003015 #33	ENSGT00510000048988 #34	ENSGT00940000157693 #35	ENSGT00940000161225 #36	ENSGT00950000183104.A.a.a #37
Orangutan	MODERN SPECIES		FOXO6 (ENSPPYG00000037126)	EDN2 (ENSPPYG00000001476)	HIVEP3 (ENSPPYG00000001475)	ENSPPYG00000035846	GUCA2B (ENSPPYG00000001474)	ENSPPYG00000001473	FOXJ3 (ENSPPYG00000001472)	RIMKLA (ENSPPYG00000001471)	ZMYND12 (ENSPPYG00000001470)	PPCS (ENSPPYG00000001469)	CCDC30 (ENSPPYG00000001468)	ENSPPYG00000001467	YBX1 (ENSPPYG00000001466)	CLDN19 (ENSPPYG00000001465)	P3H1 (ENSPPYG00000001464)	C1orf50 (ENSPPYG00000001463) #22	ENSPPYG00000001462 #23	SVBP (ENSPPYG00000034389) #24	ERMAP (ENSPPYG00000001460) #26	ZNF691 (ENSPPYG00000031936) #27	SLC2A1 (ENSPPYG00000001458) #29	CFAP144 (ENSPPYG00000001457) #30	EBNA1BP2 (ENSPPYG00000001456) #31	CFAP57 (ENSPPYG00000001455) #32	TMEM125 (ENSPPYG00000001452) #33	TIE1 (ENSPPYG00000001450) #35	MPL (ENSPPYG00000001449) #36	CDC20 (ENSPPYG00000001448) #37	ELOVL1 (ENSPPYG00000001447)	ENSPPYG00000025832	MED8 (ENSPPYG00000039932)
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	3	ENSGT00950000183053.A	ENSGT00940000157218.C	ENSGT00970000194001	ENSGT00940000154436.b	ENSGT00940000154436.a	ENSGT00940000160362	ENSGT00390000014577.b	ENSGT00390000004248	ENSGT00950000182834.C	ENSGT00390000007816	ENSGT00940000154721	ENSGT00940000153341.b.p.a.b.b.b.b.h	ENSGT00940000153341.b.p.a.a.a	ENSGT00940000158624	ENSGT00940000158725	ENSGT00390000003084 #22	ENSGT00940000154169.B #23	ENSGT00390000006113 #24	ENSGT01050000245314	ENSGT00940000160531 #26	ENSGT00910000147271 #25	ENSGT00940000161958 #27	ENSGT00940000156792 #29	ENSGT00390000006224.i.a #30	ENSGT00390000014984 #31	ENSGT00620000088018.h #32	ENSGT00390000003015 #33	ENSGT00510000048988 #34	ENSGT00940000157693 #35	ENSGT00940000161225 #36	ENSGT00950000183104.A.a.a #37
Homo/Pan group	ANCESTRAL SPECIES	4	ENSGT00940000161401	ENSGT00950000183053.A	ENSGT00940000157218.C	ENSGT00970000194001	ENSGT00940000154436.b	ENSGT00940000154436.a	ENSGT00940000160362	ENSGT00390000014577.b	ENSGT00390000004248	ENSGT00950000182834.C	ENSGT00390000007816	ENSGT00940000154721	ENSGT00940000153341.b.p.a.b.b.b.b.h	ENSGT00940000158624	ENSGT00940000158725	ENSGT00390000003084 #22	ENSGT00940000154169.B #23	ENSGT00390000006113 #24	ENSGT01050000245314	ENSGT00940000160531 #26	ENSGT00910000147271 #25	ENSGT00940000161958 #27	ENSGT00940000156792 #29	ENSGT00390000006224.i.a #30	ENSGT00390000014984 #31	ENSGT00620000088018.h #32	ENSGT00390000003015 #33	ENSGT00510000048988 #34	ENSGT00940000157693 #35	ENSGT00940000161225 #36	ENSGT00950000183104.A.a.a #37
Pan	ANCESTRAL SPECIES		ENSGT00940000157999	ENSGT00940000161401	ENSGT00950000183053.A	ENSGT00940000157218.C	ENSGT00940000154436.b	ENSGT00940000154436.a	ENSGT00940000160362	ENSGT00390000014577.b	ENSGT00390000004248	ENSGT00950000182834.C	ENSGT00390000007816	ENSGT00940000154721	ENSGT00940000153341.b.p.a.b.b.b.b.h	ENSGT00940000158624	ENSGT00940000158725	ENSGT00390000003084 #22	ENSGT00940000154169.B #23	ENSGT00390000006113 #24	ENSGT01050000245314	ENSGT00940000160531 #26	ENSGT00910000147271 #25	ENSGT00940000161958 #27	ENSGT00950000183077.a.a.a.a.a.b.b.a.a.b	ENSGT00940000156792 #29	ENSGT00390000006224.i.a #30	ENSGT00390000014984 #31	ENSGT00620000088018.h #32	ENSGT00390000003015 #33	ENSGT00510000048988 #34	ENSGT00940000157693 #35	ENSGT00940000161225 #36
Chimpanzee	MODERN SPECIES		SCMH1 (ENSPTRG00000000601)	FOXO6 (ENSPTRG00000047442)	EDN2 (ENSPTRG00000000602)	HIVEP3 (ENSPTRG00000000603)	GUCA2B (ENSPTRG00000000604)	GUCA2A (ENSPTRG00000023425)	FOXJ3 (ENSPTRG00000000606)	RIMKLA (ENSPTRG00000000607)	ZMYND12 (ENSPTRG00000000608)	PPCS (ENSPTRG00000030660)	ENSPTRG00000011617	CCDC30 (ENSPTRG00000024067)	PPIH (ENSPTRG00000000614)	CLDN19 (ENSPTRG00000000616)	P3H1 (ENSPTRG00000000617)	C1H1orf50 (ENSPTRG00000000618) #22	TMEM269 (ENSPTRG00000048821) #23	SVBP (ENSPTRG00000045258) #24	ENSPTRG00000050828	ERMAP (ENSPTRG00000000621) #26	ENSPTRG00000049463 #25	ZNF691 (ENSPTRG00000000622) #27	ENSPTRG00000045063	ENSPTRG00000043011 #28	SLC2A1 (ENSPTRG00000000623) #29	CFAP144 (ENSPTRG00000000624) #30	EBNA1BP2 (ENSPTRG00000000625) #31	CFAP57 (ENSPTRG00000000626) #32	TMEM125 (ENSPTRG00000052836) #33	C1H1orf210 (ENSPTRG00000051081) #34	TIE1 (ENSPTRG00000000631) #35
Bonobo	MODERN SPECIES		SLFNL1 (ENSPPAG00000030810)	SCMH1 (ENSPPAG00000042517)	EDN2 (ENSPPAG00000039030)	HIVEP3 (ENSPPAG00000037073)	GUCA2B (ENSPPAG00000035738)	GUCA2A (ENSPPAG00000029342)	FOXJ3 (ENSPPAG00000034767)	RIMKLA (ENSPPAG00000033011)	ZMYND12 (ENSPPAG00000036047)	PPCS (ENSPPAG00000039580)	CCDC30 (ENSPPAG00000032892)	PPIH (ENSPPAG00000034314)	YBX1 (ENSPPAG00000030580)	CLDN19 (ENSPPAG00000039606)	P3H1 (ENSPPAG00000041313)	C1orf50 (ENSPPAG00000035504) #22	ENSPPAG00000014971 #23	SVBP (ENSPPAG00000030648) #24	ENSPPAG00000042204	ERMAP (ENSPPAG00000043399) #26	ENSPPAG00000044007 #25	ZNF691 (ENSPPAG00000044114) #27	ENSPPAG00000026638	ENSPPAG00000029709 #28	SLC2A1 (ENSPPAG00000033788) #29	CFAP144 (ENSPPAG00000041132) #30	EBNA1BP2 (ENSPPAG00000038260) #31	CFAP57 (ENSPPAG00000035146) #32	TMEM125 (ENSPPAG00000021739) #33	C1orf210 (ENSPPAG00000030446) #34	TIE1 (ENSPPAG00000036693) #35
Human	MODERN SPECIES		FOXO6 (ENSG00000204060)	EDN2 (ENSG00000127129)	HIVEP3 (ENSG00000127124)	ENSG00000284895	GUCA2B (ENSG00000044012)	GUCA2A (ENSG00000197273)	FOXJ3 (ENSG00000198815)	RIMKLA (ENSG00000177181)	ZMYND12 (ENSG00000066185)	PPCS (ENSG00000127125)	CCDC30 (ENSG00000186409)	PPIH (ENSG00000171960)	YBX1 (ENSG00000065978)	CLDN19 (ENSG00000164007)	P3H1 (ENSG00000117385)	C1orf50 (ENSG00000164008) #22	TMEM269 (ENSG00000274386)	SVBP (ENSG00000177868) #24	ERMAP (ENSG00000164010) #26	ZNF691 (ENSG00000164011) #27	SLC2A1 (ENSG00000117394) #29	CFAP144 (ENSG00000186973) #30	EBNA1BP2 (ENSG00000117395) #31	CFAP57 (ENSG00000243710) #32	TMEM125 (ENSG00000179178) #33	C1orf210 (ENSG00000253313) #34	TIE1 (ENSG00000066056) #35	MPL (ENSG00000117400) #36	CDC20 (ENSG00000117399) #37	ELOVL1 (ENSG00000066322)	MED8 (ENSG00000159479)
Gorilla	MODERN SPECIES		SCMH1 (ENSGGOG00000017190)	FOXO6 (ENSGGOG00000026271)	EDN2 (ENSGGOG00000016971)	HIVEP3 (ENSGGOG00000016974)	GUCA2B (ENSGGOG00000011520)	GUCA2A (ENSGGOG00000011516)	FOXJ3 (ENSGGOG00000013618)	RIMKLA (ENSGGOG00000025939)	ZMYND12 (ENSGGOG00000004654)	PPCS (ENSGGOG00000026253)	CCDC30 (ENSGGOG00000004124)	PPIH (ENSGGOG00000022507)	ENSGGOG00000004758	CLDN19 (ENSGGOG00000005739)	ENSGGOG00000005745	ENSGGOG00000027581 #22	ENSGGOG00000038252 #23	ENSGGOG00000037573	ERMAP (ENSGGOG00000007428) #26	ZNF691 (ENSGGOG00000009549) #27	ENSGGOG00000043521	SLC2A1 (ENSGGOG00000025318) #29	CFAP144 (ENSGGOG00000010892) #30	ENSGGOG00000008724 #31	CFAP57 (ENSGGOG00000008728) #32	TMEM125 (ENSGGOG00000008740) #33	C1orf210 (ENSGGOG00000042246) #34	TIE1 (ENSGGOG00000008745) #35	MPL (ENSGGOG00000010413) #36	CDC20 (ENSGGOG00000010419) #37	ELOVL1 (ENSGGOG00000010431)
Platyrrhini	ANCESTRAL SPECIES		ENSGT00940000161401	ENSGT00950000183053.A	ENSGT00390000018052.l.d	ENSGT00940000157218.C	ENSGT00940000154436.b	ENSGT00940000154436.a	ENSGT00940000160362	ENSGT00390000014577.b	ENSGT00390000004248	ENSGT00950000182834.C	ENSGT00390000007816	ENSGT00940000154721	ENSGT00940000153341.b.p.a.a.a	ENSGT00940000158624	ENSGT00940000158725	ENSGT00390000003084 #22	ENSGT00940000154169.B #23	ENSGT00390000006113 #24	ENSGT01050000245314	ENSGT00940000160531 #26	ENSGT00910000147271 #25	ENSGT00940000161958 #27	ENSGT00940000156792 #29	ENSGT00390000006224.i.a #30	ENSGT00390000014984 #31	ENSGT00620000088018.h #32	ENSGT00390000003015 #33	ENSGT00510000048988 #34	ENSGT00940000157693 #35	ENSGT00940000161225 #36	ENSGT00950000183104.A.a.a #37
Cebidae	ANCESTRAL SPECIES	1	ENSGT00940000161401	ENSGT00950000183053.A	ENSGT00390000018052.l.d	ENSGT00940000157218.C	ENSGT00940000154436.b	ENSGT00940000154436.a	ENSGT00940000160362	ENSGT00390000014577.b	ENSGT00390000004248	ENSGT00950000182834.C	ENSGT00390000007816	ENSGT00940000154721	ENSGT00940000153341.b.p.a.a.a	ENSGT00940000158624	ENSGT00940000158725	ENSGT00390000003084 #22	ENSGT00940000154169.B #23	ENSGT00390000006113 #24	ENSGT01050000245314	ENSGT00940000160531 #26	ENSGT00910000147271 #25	ENSGT00940000161958 #27	ENSGT00940000156792 #29	ENSGT00390000006224.i.a #30	ENSGT00390000014984 #31	ENSGT00620000088018.h #32	ENSGT00390000003015 #33	ENSGT00510000048988 #34	ENSGT00940000157693 #35	ENSGT00940000161225 #36	ENSGT00950000183104.A.a.a #37
Cebidae_a	ANCESTRAL SPECIES		ENSGT00940000161401	ENSGT00950000183053.A	ENSGT00390000018052.l.d	ENSGT00940000157218.C	ENSGT00940000154436.b	ENSGT00940000154436.a	ENSGT00940000160362	ENSGT00390000014577.b	ENSGT00390000004248	ENSGT00950000182834.C	ENSGT00390000007816	ENSGT00940000154721	ENSGT00940000153341.b.p.a.a.a	ENSGT00940000158624	ENSGT00940000158725	ENSGT00390000003084 #22	ENSGT00940000154169.B #23	ENSGT00390000006113 #24	ENSGT01050000245314	ENSGT00940000160531 #26	ENSGT00940000161958 #27	ENSGT00940000156792 #29	ENSGT00390000006224.i.a #30	ENSGT00390000014984 #31	ENSGT00620000088018.h #32	ENSGT00390000003015 #33	ENSGT00510000048988 #34	ENSGT00940000157693 #35	ENSGT00940000161225 #36	ENSGT00950000183104.A.a.a #37	ENSGT01050000244838.H.d
Bolivian squirrel monkey	MODERN SPECIES	130	ENSSBOG00000032423	HIVEP3 (ENSSBOG00000030565)	GUCA2B (ENSSBOG00000028955)	GUCA2A (ENSSBOG00000026034)	FOXJ3 (ENSSBOG00000019519)	RIMKLA (ENSSBOG00000028222)	ZMYND12 (ENSSBOG00000022821)	PPCS (ENSSBOG00000019543)	ENSSBOG00000025866	ENSSBOG00000005227	CCDC30 (ENSSBOG00000030200)	PPIH (ENSSBOG00000013249)	ENSSBOG00000028808	CLDN19 (ENSSBOG00000003782)	P3H1 (ENSSBOG00000029700)	C1orf50 (ENSSBOG00000023067) #22	ENSSBOG00000019932 #23	ENSSBOG00000023713 #24	ENSSBOG00000032646	ERMAP (ENSSBOG00000034605) #26	ENSSBOG00000035723	ZNF691 (ENSSBOG00000023989) #27	SLC2A1 (ENSSBOG00000021105) #29	CFAP144 (ENSSBOG00000030848) #30	EBNA1BP2 (ENSSBOG00000033483) #31	CFAP57 (ENSSBOG00000014933) #32	TMEM125 (ENSSBOG00000019850) #33	C1orf210 (ENSSBOG00000031123) #34	TIE1 (ENSSBOG00000035981) #35	MPL (ENSSBOG00000018555) #36	ENSSBOG00000033022 #37
Capuchin	MODERN SPECIES	136	FOXO6 (ENSCCAG00000037266)	EDN2 (ENSCCAG00000001490)	ENSCCAG00000037840	HIVEP3 (ENSCCAG00000035138)	GUCA2B (ENSCCAG00000013307)	GUCA2A (ENSCCAG00000023104)	FOXJ3 (ENSCCAG00000034037)	RIMKLA (ENSCCAG00000026125)	ZMYND12 (ENSCCAG00000035962)	PPCS (ENSCCAG00000033256)	CCDC30 (ENSCCAG00000021272)	PPIH (ENSCCAG00000034762)	ENSCCAG00000033572	CLDN19 (ENSCCAG00000019996)	P3H1 (ENSCCAG00000037767)	C1orf50 (ENSCCAG00000021210) #22	ENSCCAG00000024008 #23	SVBP (ENSCCAG00000021740) #24	ENSCCAG00000030101 #25	ERMAP (ENSCCAG00000021181) #26	ZNF691 (ENSCCAG00000031796) #27	SLC2A1 (ENSCCAG00000033766) #29	UBE2NL (ENSCCAG00000018988)	FAM183A (ENSCCAG00000032092) #30	EBNA1BP2 (ENSCCAG00000025326) #31	ENSCCAG00000033078	ENSCCAG00000024738	TMEM125 (ENSCCAG00000019712) #33	C1orf210 (ENSCCAG00000029915) #34	TIE1 (ENSCCAG00000019700) #35	MPL (ENSCCAG00000032993) #36
Marmoset	MODERN SPECIES	19	FOXO6 (ENSCJAG00000047939)	ENSCJAG00000003074	HIVEP3 (ENSCJAG00000015848)	ENSCJAG00000075145	GUCA2B (ENSCJAG00000040403)	GUCA2A (ENSCJAG00000003087)	FOXJ3 (ENSCJAG00000003088)	RIMKLA (ENSCJAG00000003106)	ZMYND12 (ENSCJAG00000003111)	ENSCJAG00000003121	CCDC30 (ENSCJAG00000003131)	ENSCJAG00000003145	YBX1 (ENSCJAG00000003155)	CLDN19 (ENSCJAG00000039298)	P3H1 (ENSCJAG00000083836)	C1orf50 (ENSCJAG00000003243) #22	SVBP (ENSCJAG00000081329) #24	ENSCJAG00000082297	ERMAP (ENSCJAG00000039335) #26	ENSCJAG00000077516 #25	ENSCJAG00000071314 #25	ZNF691 (ENSCJAG00000003267) #27	ENSCJAG00000080869	SLC2A1 (ENSCJAG00000003279) #29	ENSCJAG00000080021	ENSCJAG00000003315 ##30	EBNA1BP2 (ENSCJAG00000003318) #31	CFAP57 (ENSCJAG00000003341) #32	MED8 (ENSCJAG00000003499)	C1orf210 (ENSCJAG00000007833) #34	ENSCJAG00000081586
Mas night monkey	MODERN SPECIES	679	EDN2 (ENSANAG00000037053)	ENSANAG00000031812	HIVEP3 (ENSANAG00000038496)	GUCA2B (ENSANAG00000026661)	GUCA2A (ENSANAG00000037517)	FOXJ3 (ENSANAG00000026028)	RIMKLA (ENSANAG00000034895)	ZMYND12 (ENSANAG00000031818)	ENSANAG00000038519	CCDC30 (ENSANAG00000038518)	PPIH (ENSANAG00000024337)	ENSANAG00000022793	ENSANAG00000019282	CLDN19 (ENSANAG00000027680)	P3H1 (ENSANAG00000033369)	C1orf50 (ENSANAG00000036942) #22	ENSANAG00000032787 #23	SVBP (ENSANAG00000033467) #24	ERMAP (ENSANAG00000038505) #26	ZNF691 (ENSANAG00000028956) #27	SLC2A1 (ENSANAG00000032273) #29	ENSANAG00000022187	ENSANAG00000029924	CFAP144 (ENSANAG00000022670) #30	EBNA1BP2 (ENSANAG00000038474) #31	CFAP57 (ENSANAG00000034447) #32	TMEM125 (ENSANAG00000007130) #33	ENSANAG00000035758 #34	TIE1 (ENSANAG00000022755) #35	MPL (ENSANAG00000036682) #36	CDC20 (ENSANAG00000038502) #37
Tarsier	MODERN SPECIES	7013												PPIH (ENSTSYG00000003182)	YBX1 (ENSTSYG00000006915)	CLDN19 (ENSTSYG00000035889)	P3H1 (ENSTSYG00000002325)	C1orf50 (ENSTSYG00000002383) #22	ENSTSYG00000029998	ENSTSYG00000033239 #23	ENSTSYG00000028977 #24	ERMAP (ENSTSYG00000011023) #26	ZNF691 (ENSTSYG00000029229) #27	SLC2A1 (ENSTSYG00000011161) #29
Strepsirrhini	ANCESTRAL SPECIES		ENSGT00940000157999	ENSGT00940000161401	ENSGT00950000183053.A	ENSGT00940000157218.C	ENSGT00940000154436.b	ENSGT00940000154436.a	ENSGT00940000160362	ENSGT00390000014577.b	ENSGT00390000004248	ENSGT00950000182834.C	ENSGT00390000007816	ENSGT00940000154721	ENSGT00940000153341.b.p.a.a.a	ENSGT00940000158624	ENSGT00940000158725	ENSGT00390000003084 #22	ENSGT01050000245090	ENSGT00940000154169.B #23	ENSGT00390000006113 #24	ENSGT00940000160531 #26	ENSGT00940000161958 #27	ENSGT00940000156792 #29	ENSGT00940000160928	ENSGT01090000260044.A.a.b.a.b	ENSGT00390000014984 #31	ENSGT00620000088018.h #32	ENSGT00390000003015 #33	ENSGT00510000048988 #34	ENSGT00940000157693 #35	ENSGT00940000161225 #36	ENSGT00950000183104.A.a.a #37
Lemuriformes	ANCESTRAL SPECIES		ENSGT00940000157999	ENSGT00940000161401	ENSGT00950000183053.A	ENSGT00940000157218.C	ENSGT00940000154436.b	ENSGT00940000154436.a	ENSGT00940000160362.e	ENSGT00390000014577.b	ENSGT00390000004248	ENSGT00950000182834.C	ENSGT00390000007816	ENSGT00940000154721	ENSGT00940000153341.b.p.a.a.a	ENSGT00940000158624	ENSGT00940000158725	ENSGT00390000003084 #22	ENSGT01050000245090	ENSGT00390000006113 #24	ENSGT00940000160531 #26	ENSGT00940000161958 #27	ENSGT00940000156792 #29	ENSGT00940000160928	ENSGT01090000260044.A.a.b.a.b	ENSGT00390000006224 #30	ENSGT00390000014984 #31	ENSGT00620000088018.h #32	ENSGT00390000003015 #33	ENSGT00510000048988 #34	ENSGT00940000157693 #35	ENSGT00940000161225 #36	ENSGT00950000183104.A.a.a #37
Lemuriformes_a	ANCESTRAL SPECIES	72	ENSGT00940000157999	ENSGT00940000161401	ENSGT00950000183053.A	ENSGT00940000157218.C	ENSGT00940000154436.b	ENSGT00940000154436.a	ENSGT00940000160362.e	ENSGT00390000014577.b	ENSGT00390000004248	ENSGT00950000182834.C	ENSGT00390000007816	ENSGT00940000154721	ENSGT00940000153341.b.p.a.a.a	ENSGT00940000158624	ENSGT00940000158725	ENSGT00390000003084 #22	ENSGT01050000245090	ENSGT00390000006113 #24	ENSGT00940000160531 #26	ENSGT00940000161958 #27	ENSGT00940000156792 #29	ENSGT00940000160928	ENSGT01090000260044.A.a.b.a.b	ENSGT01090000260044.A.a.b.a.a.a.a.a.a.a	ENSGT01090000260044.A.a.b.a.a.a.a.b
Coquerels sifaka	MODERN SPECIES	357	SCMH1 (ENSPCOG00000018767)	FOXO6 (ENSPCOG00000014648)	EDN2 (ENSPCOG00000017654)	HIVEP3 (ENSPCOG00000005141)	GUCA2B (ENSPCOG00000022939)	GUCA2A (ENSPCOG00000021933)	FOXJ3 (ENSPCOG00000024504)	RIMKLA (ENSPCOG00000023531)	ZMYND12 (ENSPCOG00000024191)	PPCS (ENSPCOG00000014596)	CCDC30 (ENSPCOG00000017863)	PPIH (ENSPCOG00000027670)	ENSPCOG00000019145	CLDN19 (ENSPCOG00000018973)	P3H1 (ENSPCOG00000013340)	C1orf50 (ENSPCOG00000020558) #22	TMEM269 (ENSPCOG00000027633)	ENSPCOG00000015576	SVBP (ENSPCOG00000008995) #24	ERMAP (ENSPCOG00000019494) #26	ZNF691 (ENSPCOG00000020513) #27	SLC2A1 (ENSPCOG00000006556) #29	ENSPCOG00000027063	ENSPCOG00000009811
Greater bamboo lemur	MODERN SPECIES	1612							ENSPSMG00000020193	RIMKLA (ENSPSMG00000020210)	ZMYND12 (ENSPSMG00000020250)	PPCS (ENSPSMG00000020257)	CCDC30 (ENSPSMG00000020269)	ENSPSMG00000020320	ENSPSMG00000020352	CLDN19 (ENSPSMG00000020370)	P3H1 (ENSPSMG00000020409)	C1orf50 (ENSPSMG00000020418) #22	TMEM269 (ENSPSMG00000020424)	SVBP (ENSPSMG00000020430) #24	ERMAP (ENSPSMG00000020439) #26	ZNF691 (ENSPSMG00000020442) #27	SLC2A1 (ENSPSMG00000020478) #29	ENSPSMG00000020486	ENSPSMG00000020494	ENSPSMG00000020502	ENSPSMG00000020506	ENSPSMG00000020512	ENSPSMG00000020518
Mouse lemur	MODERN SPECIES	11	SERINC2 (ENSMICG00000009364)	ENSMICG00000009359	ENSMICG00000009354	GUCA2B (ENSMICG00000011582)	GUCA2A (ENSMICG00000010437)	FOXJ3 (ENSMICG00000010441)	RIMKLA (ENSMICG00000014895)	ZMYND12 (ENSMICG00000043809)	PPCS (ENSMICG00000014936)	CCDC30 (ENSMICG00000014950)	PPIH (ENSMICG00000014971)	ENSMICG00000014984	ENSMICG00000033725	CLDN19 (ENSMICG00000029190)	P3H1 (ENSMICG00000015012)	C1orf50 (ENSMICG00000015041) #22	TMEM269 (ENSMICG00000044647)	SVBP (ENSMICG00000046288) #24	ERMAP (ENSMICG00000014750) #26	ZNF691 (ENSMICG00000014797) #27	SLC2A1 (ENSMICG00000014811) #29	CFAP144 (ENSMICG00000026828) #30	EBNA1BP2 (ENSMICG00000007000) #31	CFAP57 (ENSMICG00000007008) #32	C1orf210 (ENSMICG00000046088) #34	TIE1 (ENSMICG00000007042) #35	MPL (ENSMICG00000007058) #36	CDC20 (ENSMICG00000007065) #37	ELOVL1 (ENSMICG00000036712)	MED8 (ENSMICG00000007085)	SZT2 (ENSMICG00000007089)
Euarchontoglires_A	ANCESTRAL SPECIES		ENSGT00940000157218.C	ENSGT00970000194001	ENSGT00940000154436.b	ENSGT00940000154436.a	ENSGT00940000160362	ENSGT00390000014577.b	ENSGT00390000004248	ENSGT00950000182834.C	ENSGT00390000000654	ENSGT00390000007816	ENSGT00700000105447	ENSGT00940000154721	ENSGT00940000153341.b.p.a.a.a	ENSGT00940000158624	ENSGT00940000158725	ENSGT00390000003084 #22	ENSGT00940000154169.B #23	ENSGT00390000006113 #24	ENSGT00940000160531 #26	ENSGT00940000161958 #27	ENSGT00940000156792 #29	ENSGT00940000160928	ENSGT01090000260044.A.a.b.a.b	ENSGT01090000260044.A.a.b.a.a.a.a.a.a.a	ENSGT01090000260044.A.a.b.a.a.a.a.b	ENSGT01090000260044.A.a.b.a.a.a.a.a.b	ENSGT01090000260044.A.a.b.a.a.a.b	ENSGT01090000260044.A.a.b.a.a.b	ENSGT01090000260044.A.a.b.a.a.a.a.a.a.b	ENSGT00390000006224 #30	ENSGT00390000014984 #31
Glires	ANCESTRAL SPECIES		ENSGT00940000157218.C	ENSGT00970000194001	ENSGT00940000154436.b	ENSGT00940000154436.a	ENSGT00940000160362	ENSGT00390000014577.b	ENSGT00390000004248	ENSGT00950000182834.C	ENSGT00390000000654	ENSGT00390000007816	ENSGT00700000105447	ENSGT00940000154721	ENSGT00940000153341.b.p.a.a.a	ENSGT00940000158624	ENSGT00940000158725	ENSGT00390000003084 #22	ENSGT00940000154169.B #23	ENSGT00390000006113 #24	ENSGT00940000160531 #26	ENSGT00940000161958 #27	ENSGT00940000156792 #29	ENSGT00940000160928	ENSGT01090000260044.A.a.b.a.b	ENSGT01090000260044.A.a.b.a.a.a.a.a.a.a	ENSGT01090000260044.A.a.b.a.a.a.a.b	ENSGT01090000260044.A.a.b.a.a.a.a.a.b	ENSGT01090000260044.A.a.b.a.a.a.b	ENSGT01090000260044.A.a.b.a.a.b	ENSGT01090000260044.A.a.b.a.a.a.a.a.a.b	ENSGT00390000006224 #30	ENSGT00390000014984 #31
Rodentia	ANCESTRAL SPECIES		ENSGT00940000157218.C	ENSGT00970000194001	ENSGT00940000154436.b	ENSGT00940000154436.a	ENSGT00940000160362	ENSGT00390000014577.b	ENSGT00390000004248	ENSGT00950000182834.C	ENSGT00390000000654	ENSGT00390000007816	ENSGT00700000105447	ENSGT00940000154721	ENSGT00940000153341.b.p.a.a.a	ENSGT00940000158624	ENSGT00940000158725	ENSGT00390000003084 #22	ENSGT00940000154169.B #23	ENSGT00390000006113 #24	ENSGT00940000160531 #26	ENSGT00940000161958 #27	ENSGT00940000156792 #29	ENSGT00940000160928	ENSGT01090000260044.A.a.b.a.b	ENSGT01090000260044.A.a.b.a.a.a.a.a.a.a	ENSGT01090000260044.A.a.b.a.a.a.a.b	ENSGT01090000260044.A.a.b.a.a.a.a.a.b	ENSGT01090000260044.A.a.b.a.a.a.b	ENSGT01090000260044.A.a.b.a.a.b	ENSGT01090000260044.A.a.b.a.a.a.a.a.a.b	ENSGT00390000014984 #31	ENSGT00620000088018.h #32
Rodentia_A	ANCESTRAL SPECIES		ENSGT00950000183053.A	ENSGT00940000157218.C	ENSGT00970000194001	ENSGT00940000154436.b	ENSGT00940000154436.a	ENSGT00940000160362	ENSGT00390000014577.b	ENSGT00390000004248	ENSGT00950000182834.C	ENSGT00390000000654	ENSGT00390000007816	ENSGT00940000154721	ENSGT00940000153341.b.p.a.a.a	ENSGT00940000158624	ENSGT00940000158725	ENSGT00390000003084 #22	ENSGT00940000154169.B #23	ENSGT00390000006113 #24	ENSGT00940000160531 #26	ENSGT00940000161958 #27	ENSGT00940000156792 #29	ENSGT00940000160928	ENSGT01090000260044.A.a.b.a.b	ENSGT01090000260044.A.a.b.a.a.a.a.a.a.a	ENSGT01090000260044.A.a.b.a.a.a.a.b	ENSGT01090000260044.A.a.b.a.a.a.a.a.b	ENSGT01090000260044.A.a.b.a.a.a.b	ENSGT01090000260044.A.a.b.a.a.b	ENSGT01090000260044.A.a.b.a.a.a.a.a.a.b	ENSGT00390000014984 #31	ENSGT00620000088018.h #32
Sciuridae	ANCESTRAL SPECIES	3	ENSGT00940000161401	ENSGT00950000183053.A	ENSGT00940000157218.C	ENSGT00970000194001	ENSGT00940000154436.b	ENSGT00940000154436.a	ENSGT00940000160362	ENSGT00390000014577.b	ENSGT00390000004248	ENSGT00950000182834.C	ENSGT00390000007816	ENSGT00940000154721	ENSGT00940000153341.b.p.a.a.a	ENSGT00940000158624	ENSGT00940000158725	ENSGT00390000003084 #22	ENSGT00940000154169.B #23	ENSGT00390000006113 #24	ENSGT00940000160531 #26	ENSGT00940000161958 #27	ENSGT00940000156792 #29	ENSGT00940000160928	ENSGT01090000260044.A.a.b.a.b	ENSGT01090000260044.A.a.b.a.a.a.a.a.a.a	ENSGT01090000260044.A.a.b.a.a.a.a.b	ENSGT01090000260044.A.a.b.a.a.a.a.a.b	ENSGT01090000260044.A.a.b.a.a.a.b	ENSGT01090000260044.A.a.b.a.a.b	ENSGT01090000260044.A.a.b.a.a.a.a.a.a.b	ENSGT00390000014984 #31	ENSGT00620000088018.h #32
Marmotini	ANCESTRAL SPECIES		ENSGT00940000161401	ENSGT00950000183053.A	ENSGT00940000157218.C	ENSGT01100000264574	ENSGT00940000154436.b	ENSGT00940000154436.a	ENSGT00940000160362	ENSGT00390000014577.b	ENSGT00390000004248	ENSGT00950000182834.C	ENSGT00390000007816	ENSGT00940000154721	ENSGT00940000153341.b.p.a.a.a	ENSGT00940000158624	ENSGT00940000158725	ENSGT00390000003084 #22	ENSGT00940000154169.B #23	ENSGT00390000006113 #24	ENSGT00940000160531 #26	ENSGT00940000161958 #27	ENSGT00940000156792 #29	ENSGT00940000160928	ENSGT01090000260044.A.a.b.a.a.a.a.a.a.a	ENSGT01090000260044.A.a.b.a.a.a.a.b	ENSGT01090000260044.A.a.b.a.a.a.a.a.b	ENSGT01090000260044.A.a.b.a.a.a.b	ENSGT01090000260044.A.a.b.a.a.b	ENSGT01090000260044.A.a.b.a.a.a.a.a.a.b	ENSGT00390000014984 #31	ENSGT00620000088018.h #32	ENSGT00390000003015 #33
Alpin marmot	MODERN SPECIES	15	HIVEP3 (ENSMMMG00000002224)	ENSMMMG00000002219	ENSMMMG00000002145	GUCA2B (ENSMMMG00000002123)	GUCA2A (ENSMMMG00000002105)	FOXJ3 (ENSMMMG00000002048)	RIMKLA (ENSMMMG00000002028)	ZMYND12 (ENSMMMG00000002011)	PPCS (ENSMMMG00000001992)	ENSMMMG00000001948	PPIH (ENSMMMG00000001881)	ENSMMMG00000001834	CLDN19 (ENSMMMG00000001817)	P3H1 (ENSMMMG00000001705)	ENSMMMG00000001687	C1orf50 (ENSMMMG00000001676) #22	ENSMMMG00000001646 #23	ENSMMMG00000001632 #24	ERMAP (ENSMMMG00000001617) #26	ENSMMMG00000001610 #27	SLC2A1 (ENSMMMG00000001574) #29	ENSMMMG00000001535	ENSMMMG00000001503	ENSMMMG00000001489	ENSMMMG00000001478	ENSMMMG00000001460	ENSMMMG00000001451	EBNA1BP2 (ENSMMMG00000001428) #31	CFAP57 (ENSMMMG00000001332) #32	TMEM125 (ENSMMMG00000001319) #33	C1orf210 (ENSMMMG00000001310) #34
Marmotini_b	ANCESTRAL SPECIES		ENSGT00940000161401	ENSGT00950000183053.A	ENSGT00940000157218.C	ENSGT01100000264574	ENSGT00940000154436.b	ENSGT00940000154436.a	ENSGT00940000160362	ENSGT00390000014577.b	ENSGT00390000004248	ENSGT00950000182834.C	ENSGT00390000007816	ENSGT00940000154721	ENSGT00940000153341.b.p.a.a.a	ENSGT00940000158624	ENSGT00940000158725	ENSGT00390000003084 #22	ENSGT00940000154169.B #23	ENSGT00390000006113 #24	ENSGT00940000160531 #26	ENSGT00940000161958 #27	ENSGT00940000156792 #29	ENSGT00940000160928	ENSGT01090000260044.A.a.b.a.a.a.a.a.a.a	ENSGT01090000260044.A.a.b.a.a.a.a.b	ENSGT01090000260044.A.a.b.a.a.a.a.a.b	ENSGT01090000260044.A.a.b.a.a.a.b	ENSGT01090000260044.A.a.b.a.a.b	ENSGT01090000260044.A.a.b.a.a.a.a.a.a.b	ENSGT00390000014984 #31	ENSGT00620000088018.h #32	ENSGT00390000003015 #33
Squirrel	MODERN SPECIES	74	SCMH1 (ENSSTOG00000013099)	FOXO6 (ENSSTOG00000026753)	EDN2 (ENSSTOG00000014874)	HIVEP3 (ENSSTOG00000014879)	GUCA2B (ENSSTOG00000027358)	GUCA2A (ENSSTOG00000001891)	FOXJ3 (ENSSTOG00000007775)	RIMKLA (ENSSTOG00000000109)	ZMYND12 (ENSSTOG00000000110)	PPCS (ENSSTOG00000000111)	ENSSTOG00000000114	PPIH (ENSSTOG00000000115)	ENSSTOG00000000116	CLDN19 (ENSSTOG00000000117)	P3H1 (ENSSTOG00000000119)	C1orf50 (ENSSTOG00000000121) #22	ENSSTOG00000000122 #23	SVBP (ENSSTOG00000024761) #24	ERMAP (ENSSTOG00000000123) #26	ZNF691 (ENSSTOG00000000130) #27	SLC2A1 (ENSSTOG00000021861) #29	ENSSTOG00000021901	ENSSTOG00000020420	ENSSTOG00000027942	ENSSTOG00000009038	ENSSTOG00000022697	ENSSTOG00000027047	ENSSTOG00000024292	EBNA1BP2 (ENSSTOG00000004747) #31	CFAP57 (ENSSTOG00000022840) #32	TMEM125 (ENSSTOG00000027469) #33
Arctic ground squirrel	MODERN SPECIES	454	EDN2 (ENSUPAG00010008968)	HIVEP3 (ENSUPAG00010008983)	ENSUPAG00010009010	ENSUPAG00010009015	GUCA2B (ENSUPAG00010009046)	GUCA2A (ENSUPAG00010009059)	FOXJ3 (ENSUPAG00010009073)	RIMKLA (ENSUPAG00010009102)	ZMYND12 (ENSUPAG00010009127)	PPCS (ENSUPAG00010009138)	ENSUPAG00010009148	PPIH (ENSUPAG00010009190)	ENSUPAG00010009343	CLDN19 (ENSUPAG00010009369)	P3H1 (ENSUPAG00010009375)	C1orf50 (ENSUPAG00010009420) #22	ENSUPAG00010009432	ENSUPAG00010009441 #23	ENSUPAG00010009461 #24	ERMAP (ENSUPAG00010009463) #26	ZNF691 (ENSUPAG00010009497) #27	SLC2A1 (ENSUPAG00010009500) #29
Eurasian red squirrel	MODERN SPECIES		FOXO6 (ENSSVLG00005009973)	EDN2 (ENSSVLG00005010001)	HIVEP3 (ENSSVLG00005010057)	ENSSVLG00005010108	GUCA2B (ENSSVLG00005010132)	GUCA2A (ENSSVLG00005010160)	FOXJ3 (ENSSVLG00005010205)	RIMKLA (ENSSVLG00005010382)	ZMYND12 (ENSSVLG00005010434)	PPCS (ENSSVLG00005010465)	CCDC30 (ENSSVLG00005010582)	PPIH (ENSSVLG00005011156)	ENSSVLG00005011204	CLDN19 (ENSSVLG00005011316)	P3H1 (ENSSVLG00005011353)	C1orf50 (ENSSVLG00005011424) #22	ENSSVLG00005011496 #23	SVBP (ENSSVLG00005011644) #24	ERMAP (ENSSVLG00005011679) #26	ZNF691 (ENSSVLG00005011749) #27	SLC2A1 (ENSSVLG00005011775) #29	ENSSVLG00005011876	ENSSVLG00005012113	ENSSVLG00005012137	ENSSVLG00005012157	ENSSVLG00005012249	ENSSVLG00005012283	ENSSVLG00005012342	ENSSVLG00005012394	ENSSVLG00005012413	EBNA1BP2 (ENSSVLG00005012432) #31
Hystricomorpha	ANCESTRAL SPECIES	4	ENSGT00950000183053.A	ENSGT00940000157218.C	ENSGT01100000264574	ENSGT00940000154436.b	ENSGT00940000154436.a	ENSGT00940000160362	ENSGT00390000014577.b	ENSGT00390000004248	ENSGT00950000182834.C	ENSGT00390000000654	ENSGT00390000007816	ENSGT00940000154721	ENSGT00940000153341.b.p.a.a.a	ENSGT00940000158624	ENSGT00940000158725	ENSGT00390000003084 #22	ENSGT00940000154169.B #23	ENSGT00390000006113 #24	ENSGT00940000160531 #26	ENSGT00940000161958 #27	ENSGT00940000156792 #29	ENSGT00940000160928	ENSGT01090000260044.A.a.b.a.a.a.a.a.a.b	ENSGT00390000014984 #31	ENSGT00620000088018.h #32	ENSGT00390000003015 #33	ENSGT00510000048988 #34	ENSGT00940000157693 #35	ENSGT00940000161225 #36	ENSGT00950000183104.A.a.a #37	ENSGT01050000244838.H.d
Naked mole-rat female	DUPLICATION
Naked mole-rat female	DUPLICATION
Naked mole-rat female	MODERN SPECIES		KIAA0408 (ENSHGLG00000009498)	ECHDC1 (ENSHGLG00000034426)	RNF146 (ENSHGLG00000018862)	RSPO3 (ENSHGLG00000047036)	CENPW (ENSHGLG00000045481)	TRMT11 (ENSHGLG00000014007)	HINT3 (ENSHGLG00000041327)	ENSHGLG00000016076	ENSHGLG00000016948	HEY2 (ENSHGLG00000017079)	HDDC2 (ENSHGLG00000034250)	ENSHGLG00000001350	ENSHGLG00000038009	ENSHGLG00000038906	ENSHGLG00000033903	ENSHGLG00000044736 #22	ENSHGLG00000001275	ENSHGLG00000032242	TRDN (ENSHGLG00000001423)	CLVS2 (ENSHGLG00000001622)	SMPDL3A (ENSHGLG00000001781)	FABP7 (ENSHGLG00000001824)	ENSHGLG00000036667	SERINC1 (ENSHGLG00000035221)	HSF2 (ENSHGLG00000000864)	ENSHGLG00000032930	GJA1 (ENSHGLG00000047888)	TBC1D32 (ENSHGLG00000001631)	ENSHGLG00000001744	ENSHGLG00000002141	MAN1A1 (ENSHGLG00000002233)
Naked mole-rat female	MODERN SPECIES	12	MFAP4 (ENSHGLG00000018435)	RNF112 (ENSHGLG00000014434)	SLC47A1 (ENSHGLG00000008765)	ENSHGLG00000011530	ENSHGLG00000039140	ALDH3A2 (ENSHGLG00000004669)	ENSHGLG00000005779	ENSHGLG00000021085	ENSHGLG00000047955	ENSHGLG00000015738	ENSHGLG00000015142	ENSHGLG00000044793	ENSHGLG00000011782	ENSHGLG00000013379	ENSHGLG00000038588	ENSHGLG00000040020 #22	ENSHGLG00000018176	TANC2 (ENSHGLG00000015717)	CYB561 (ENSHGLG00000011329)	ENSHGLG00000032755	ENSHGLG00000035141	DCAF7 (ENSHGLG00000042412)	ENSHGLG00000035993	TACO1 (ENSHGLG00000044193)	MAP3K3 (ENSHGLG00000017968)	ENSHGLG00000032825	STRADA (ENSHGLG00000018908)	CCDC47 (ENSHGLG00000006991)	DDX42 (ENSHGLG00000010024)	FTSJ3 (ENSHGLG00000012282)	ENSHGLG00000013190
Naked mole-rat female	MODERN SPECIES	26	HIVEP3 (ENSHGLG00000004497)	ENSHGLG00000036409	GUCA2B (ENSHGLG00000005936)	GUCA2A (ENSHGLG00000038174)	ENSHGLG00000045938	FOXJ3 (ENSHGLG00000003548)	RIMKLA (ENSHGLG00000006347)	PPCS (ENSHGLG00000001315)	ZMYND12 (ENSHGLG00000001119)	ENSHGLG00000038638	CCDC30 (ENSHGLG00000001543)	PPIH (ENSHGLG00000002085)	ENSHGLG00000019595	CLDN19 (ENSHGLG00000042448)	P3H1 (ENSHGLG00000019499)	ENSHGLG00000019491 #22	ENSHGLG00000019496 #23	CCDC23 (ENSHGLG00000039695) #24	ERMAP (ENSHGLG00000041316) #26	ENSHGLG00000002421 #27	SLC2A1 (ENSHGLG00000002559) #29	ENSHGLG00000048449	ENSHGLG00000019963	ENSHGLG00000003737	ENSHGLG00000035461	ENSHGLG00000050288	ENSHGLG00000042997	EBNA1BP2 (ENSHGLG00000002849) #31	CFAP57 (ENSHGLG00000002959) #32	TMEM125 (ENSHGLG00000003453) #33	ENSHGLG00000003735 #34
Hystricomorpha_a	ANCESTRAL SPECIES	1	ENSGT00940000157999	ENSGT00940000161401	ENSGT00950000183053.A	ENSGT00940000157218.C	ENSGT00940000154436.b	ENSGT00940000154436.a	ENSGT00940000160362	ENSGT00390000014577.b	ENSGT00390000004248	ENSGT00950000182834.C	ENSGT00390000007816	ENSGT00940000154721	ENSGT00940000153341.b.p.a.a.a	ENSGT00940000158624	ENSGT00940000158725	ENSGT00390000003084 #22	ENSGT00940000154169.B #23	ENSGT00390000006113 #24	ENSGT00940000161958 #27	ENSGT00940000156792 #29	ENSGT00940000160928	ENSGT01090000260044.A.a.b.a.a.a.a.a.a.b	ENSGT00390000014984 #31	ENSGT00620000088018.h #32	ENSGT00390000003015 #33	ENSGT00510000048988 #34	ENSGT00940000157693 #35	ENSGT00940000161225 #36	ENSGT00950000183104.A.a.a #37	ENSGT01050000244838.H.d	ENSGT00390000011838
Hystricomorpha_b	ANCESTRAL SPECIES	90	ENSGT00940000157999	ENSGT00940000161401	ENSGT00950000183053.A	ENSGT00940000157218.C	ENSGT00940000154436.b	ENSGT00940000154436.a	ENSGT00940000160362	ENSGT00390000014577.b	ENSGT00390000004248	ENSGT00950000182834.C	ENSGT00390000007816	ENSGT00940000154721	ENSGT00940000153341.b.p.a.a.a	ENSGT00940000158624	ENSGT00940000158725	ENSGT00390000003084 #22	ENSGT00940000154169.B #23	ENSGT00390000006113 #24	ENSGT00940000161958 #27	ENSGT00940000156792 #29	ENSGT00940000160928	ENSGT01090000260044.A.a.b.a.a.a.a.a.a.b	ENSGT00390000014984 #31	ENSGT00620000088018.h #32	ENSGT00390000003015 #33	ENSGT00510000048988 #34	ENSGT00940000157693 #35	ENSGT00940000161225 #36	ENSGT00950000183104.A.a.a #37	ENSGT01050000244838.H.d	ENSGT00390000011838
Long-tailed chinchilla	MODERN SPECIES	244	FOXO6 (ENSCLAG00000002214)	EDN2 (ENSCLAG00000002304)	HIVEP3 (ENSCLAG00000003048)	GUCA2B (ENSCLAG00000003462)	GUCA2A (ENSCLAG00000003499)	FOXJ3 (ENSCLAG00000004107)	RIMKLA (ENSCLAG00000004183)	ZMYND12 (ENSCLAG00000004415)	PPCS (ENSCLAG00000004488)	ENSCLAG00000004515	CCDC30 (ENSCLAG00000004571)	PPIH (ENSCLAG00000002063)	ENSCLAG00000002253	CLDN19 (ENSCLAG00000002321)	P3H1 (ENSCLAG00000002493)	C1orf50 (ENSCLAG00000002818) #22	ENSCLAG00000002885 #23	SVBP (ENSCLAG00000003001) #24	ZNF691 (ENSCLAG00000002021) #27	SLC2A1 (ENSCLAG00000002106) #29	ENSCLAG00000002144	ENSCLAG00000017559	EBNA1BP2 (ENSCLAG00000002547) #31	CFAP57 (ENSCLAG00000002618) #32	TMEM125 (ENSCLAG00000003252) #33	C1orf210 (ENSCLAG00000003472) #34	TIE1 (ENSCLAG00000004371) #35	MPL (ENSCLAG00000005179) #36	CDC20 (ENSCLAG00000005417) #37	ELOVL1 (ENSCLAG00000005835)	MED8 (ENSCLAG00000006138)
Degu	MODERN SPECIES	286	HIVEP3 (ENSODEG00000001881)	ENSODEG00000018717	GUCA2B (ENSODEG00000001838)	GUCA2A (ENSODEG00000001820)	FOXJ3 (ENSODEG00000001809)	ENSODEG00000001782	RIMKLA (ENSODEG00000001770)	ZMYND12 (ENSODEG00000001753)	PPCS (ENSODEG00000001735)	ENSODEG00000001693	ENSODEG00000001627	ENSODEG00000001592	CLDN19 (ENSODEG00000001571)	P3H1 (ENSODEG00000001470)	ENSODEG00000018684	C1orf50 (ENSODEG00000001430) #22	ENSODEG00000001409 #23	SVBP (ENSODEG00000003888) #24	ENSODEG00000019202 #27	ENSODEG00000003864	SLC2A1 (ENSODEG00000003831) #29	ENSODEG00000003794
Guinea pig	MODERN SPECIES	133	PRDX1 (ENSCPOG00000014137)	MMACHC (ENSCPOG00000014136)	TESK2 (ENSCPOG00000012459)	ENSCPOG00000033680	TOE1 (ENSCPOG00000036595)	MUTYH (ENSCPOG00000012452)	HPDL (ENSCPOG00000019649)	RIMKLA (ENSCPOG00000005184)	ZMYND12 (ENSCPOG00000012992)	PPCS (ENSCPOG00000003240)	ENSCPOG00000001391	PPIH (ENSCPOG00000008214)	ENSCPOG00000010888	CLDN19 (ENSCPOG00000039124)	P3H1 (ENSCPOG00000021271)	C1orf50 (ENSCPOG00000039943) #22	ENSCPOG00000027098 #23	SVBP (ENSCPOG00000033208) #24	ZNF691 (ENSCPOG00000010765) #27	SLC2A1 (ENSCPOG00000000635) #29	ENSCPOG00000035738	ENSCPOG00000008911	ENSCPOG00000026850	ENSCPOG00000033534	EBNA1BP2 (ENSCPOG00000005187) #31	CFAP57 (ENSCPOG00000007489) #32	TMEM125 (ENSCPOG00000039580) #33	C1orf210 (ENSCPOG00000034493) #34	TIE1 (ENSCPOG00000006080) #35	MPL (ENSCPOG00000006086) #36	CDC20 (ENSCPOG00000006090) #37
Rodentia_B	ANCESTRAL SPECIES		ENSGT00950000183053.A	ENSGT00940000157218.C	ENSGT01100000264574	ENSGT00940000154436.b	ENSGT00940000154436.a	ENSGT00940000160362	ENSGT00390000014577.b	ENSGT00390000004248	ENSGT00950000182834.C	ENSGT00390000007816	ENSGT00700000105447	ENSGT00940000154721	ENSGT00940000153341.b.p.a.a.a	ENSGT00940000158624	ENSGT00940000158725	ENSGT00390000003084 #22	ENSGT00940000154169.B #23	ENSGT00390000006113 #24	ENSGT00940000160531 #26	ENSGT00940000161958 #27	ENSGT00940000156792 #29	ENSGT00940000160928	ENSGT01090000260044.A.a.b.a.b	ENSGT01090000260044.A.a.b.a.a.a.a.a.a.a	ENSGT01090000260044.A.a.b.a.a.a.a.b	ENSGT01090000260044.A.a.b.a.a.a.a.a.b	ENSGT01090000260044.A.a.b.a.a.a.b	ENSGT01090000260044.A.a.b.a.a.b	ENSGT01090000260044.A.a.b.a.a.a.a.a.a.b	ENSGT00390000014984 #31	ENSGT00620000088018.h #32
Myomorpha	ANCESTRAL SPECIES	3	ENSGT00950000183053.A	ENSGT00940000157218.C	ENSGT01100000264574	ENSGT00940000154436.b	ENSGT00940000154436.a	ENSGT00940000160362	ENSGT00390000014577.b	ENSGT00390000004248	ENSGT00950000182834.C	ENSGT00390000007816	ENSGT00700000105447	ENSGT00940000154721	ENSGT00940000153341.b.p.a.a.a	ENSGT00940000158624	ENSGT00940000158725	ENSGT00390000003084 #22	ENSGT00940000154169.B #23	ENSGT00390000006113 #24	ENSGT00940000160531 #26	ENSGT00940000161958 #27	ENSGT00940000156792 #29	ENSGT00940000160928	ENSGT01090000260044.A.a.b.a.b	ENSGT01090000260044.A.a.b.a.a.a.a.a.a.a	ENSGT01090000260044.A.a.b.a.a.a.a.b	ENSGT01090000260044.A.a.b.a.a.a.a.a.b	ENSGT01090000260044.A.a.b.a.a.a.b	ENSGT01090000260044.A.a.b.a.a.b	ENSGT01090000260044.A.a.b.a.a.a.a.a.a.b	ENSGT00390000014984 #31	ENSGT00620000088018.h #32
Muroidea	ANCESTRAL SPECIES	3	ENSGT00950000183053.A	ENSGT00940000157218.C	ENSGT01100000264574	ENSGT00940000154436.b	ENSGT00940000154436.a	ENSGT00940000160362	ENSGT00390000014577.b	ENSGT00390000004248	ENSGT00950000182834.C	ENSGT00390000007816	ENSGT00700000105447	ENSGT00940000154721	ENSGT00940000153341.b.p.a.a.a	ENSGT00940000158624	ENSGT00940000158725	ENSGT00390000003084 #22	ENSGT00940000154169.B #23	ENSGT00390000006113 #24	ENSGT00940000160531 #26	ENSGT00940000161958 #27	ENSGT00940000156792 #29	ENSGT00940000160928	ENSGT01090000260044.A.a.b.a.b	ENSGT01090000260044.A.a.b.a.a.a.a.a.a.a	ENSGT01090000260044.A.a.b.a.a.a.a.b	ENSGT01090000260044.A.a.b.a.a.a.a.a.b	ENSGT01090000260044.A.a.b.a.a.a.b	ENSGT01090000260044.A.a.b.a.a.b	ENSGT01090000260044.A.a.b.a.a.a.a.a.a.b	ENSGT00390000014984 #31	ENSGT00620000088018.h #32
Muroidea_A	ANCESTRAL SPECIES	3	ENSGT00950000183053.A	ENSGT00940000157218.C	ENSGT00940000154436.b	ENSGT00940000154436.a	ENSGT00940000160362	ENSGT00390000014577.b	ENSGT00390000004248	ENSGT00950000182834.C	ENSGT00390000007816	ENSGT00940000154721.db.b	ENSGT00700000105447	ENSGT00940000154721.db.a	ENSGT00940000153341.b.p.a.a.a	ENSGT00940000158624	ENSGT00940000158725	ENSGT00390000003084 #22	ENSGT00940000154169.B #23	ENSGT00390000006113 #24	ENSGT00940000160531 #26	ENSGT00940000161958 #27	ENSGT00940000156792 #29	ENSGT00940000160928	ENSGT01090000260044.A.a.b.a.b	ENSGT01090000260044.A.a.b.a.a.a.a.a.a.a	ENSGT01090000260044.A.a.b.a.a.a.a.b	ENSGT01090000260044.A.a.b.a.a.a.a.a.b	ENSGT01090000260044.A.a.b.a.a.a.b	ENSGT01090000260044.A.a.b.a.a.b	ENSGT01090000260044.A.a.b.a.a.a.a.a.a.b	ENSGT00390000014984 #31	ENSGT00620000088018.h #32
Murinae	ANCESTRAL SPECIES	2	ENSGT00950000183053.A	ENSGT00940000157218.C	ENSGT00940000154436.b	ENSGT00940000154436.a	ENSGT00940000160362	ENSGT00390000014577.b	ENSGT00390000004248	ENSGT00950000182834.C	ENSGT00390000007816	ENSGT00940000154721.db.b	ENSGT00700000105447	ENSGT00940000154721.db.a	ENSGT00940000153341.b.p.a.a.a	ENSGT00940000158624	ENSGT00940000158725	ENSGT00390000003084 #22	ENSGT00940000154169.B #23	ENSGT00390000006113 #24	ENSGT00940000160531 #26	ENSGT00940000161958 #27	ENSGT00940000156792 #29	ENSGT00940000160928	ENSGT01090000260044.A.a.b.a.b.c.a	ENSGT01090000260044.A.a.b.a.b.c.b	ENSGT01090000260044.A.a.b.a.b.d	ENSGT01090000260044.A.a.b.a.a.a.a.a.a.a	ENSGT01090000260044.A.a.b.a.a.a.a.b	ENSGT01090000260044.A.a.b.a.a.a.a.a.b	ENSGT01090000260044.A.a.b.a.a.a.b	ENSGT01090000260044.A.a.b.a.a.b	ENSGT01090000260044.A.a.b.a.a.a.a.a.a.b
Mus	ANCESTRAL SPECIES	3	ENSGT00940000161401	ENSGT00950000183053.A	ENSGT00940000157218.C	ENSGT00940000154436.b	ENSGT00940000154436.a	ENSGT00940000160362	ENSGT00530000064266	ENSGT00390000014577.b	ENSGT00390000004248	ENSGT00950000182834.C	ENSGT00390000007816	ENSGT00940000154721.db.b	ENSGT00940000153341.b.p.a.a.a	ENSGT00940000158624	ENSGT00940000158725	ENSGT00390000003084 #22	ENSGT00940000154169.B #23	ENSGT00390000006113 #24	ENSGT00940000160531 #26	ENSGT00940000161958 #27	ENSGT00940000156792 #29	ENSGT00940000160928	ENSGT01090000260044.A.a.b.a.b.c.a.a.a	ENSGT01090000260044.A.a.b.a.b.c.b	ENSGT01090000260044.A.a.b.a.b.d	ENSGT01090000260044.A.a.b.a.a.a.a.a.a.a	ENSGT01090000260044.A.a.b.a.a.a.a.b	ENSGT01090000260044.A.a.b.a.a.a.a.a.b	ENSGT01090000260044.A.a.b.a.a.a.b	ENSGT01090000260044.A.a.b.a.a.a.a.a.a.b	ENSGT00390000014984 #31
Mus_A	ANCESTRAL SPECIES	3	ENSGT00940000161401	ENSGT00950000183053.A	ENSGT00940000157218.C	ENSGT00940000154436.b	ENSGT00940000154436.a	ENSGT00940000160362	ENSGT00530000064266	ENSGT00390000014577.b	ENSGT00390000004248	ENSGT00950000182834.C	ENSGT00390000007816	ENSGT00940000154721.db.b	ENSGT00940000153341.b.p.a.a.a	ENSGT00940000158624	ENSGT00940000158725	ENSGT00390000003084 #22	ENSGT00940000154169.B #23	ENSGT00390000006113 #24	ENSGT00940000160531 #26	ENSGT00940000161958 #27	ENSGT00940000156792 #29	ENSGT00940000160928	ENSGT01090000260044.A.a.b.a.b.c.a.a.b.b.a.b	ENSGT01090000260044.A.a.b.a.b.c.a.a.a	ENSGT01090000260044.A.a.b.a.b.c.b	ENSGT01090000260044.A.a.b.a.b.d	ENSGT01090000260044.A.a.b.a.a.a.a.a.a.a	ENSGT01090000260044.A.a.b.a.a.a.a.b	ENSGT01090000260044.A.a.b.a.a.a.a.a.b	ENSGT01090000260044.A.a.b.a.a.a.b	ENSGT01090000260044.A.a.b.a.a.a.a.a.a.b
Ryukyu mouse	MODERN SPECIES	13	Edn2 (MGP_CAROLIEiJ_G0026407)	Hivep3 (MGP_CAROLIEiJ_G0026406)	Guca2b (MGP_CAROLIEiJ_G0026405)	Guca2a (MGP_CAROLIEiJ_G0026404)	Foxj3 (MGP_CAROLIEiJ_G0026403)	Frg2f1 (MGP_CAROLIEiJ_G0026402)	Rimkla (MGP_CAROLIEiJ_G0026401)	Zmynd12 (MGP_CAROLIEiJ_G0026400)	Ppcs (MGP_CAROLIEiJ_G0026399)	MGP_CAROLIEiJ_G0026398	Ppih (MGP_CAROLIEiJ_G0026397)	Ybx1 (MGP_CAROLIEiJ_G0026396)	Cldn19 (MGP_CAROLIEiJ_G0026395)	P3h1 (MGP_CAROLIEiJ_G0026394)	Tmem269 (MGP_CAROLIEiJ_G0026393) #23	AU022252 (MGP_CAROLIEiJ_G0026392) #22	Svbp (MGP_CAROLIEiJ_G0026391) #24	Ermap (MGP_CAROLIEiJ_G0026390) #26	Zfp691 (MGP_CAROLIEiJ_G0026389) #27	Slc2a1 (MGP_CAROLIEiJ_G0026388) #29	Lao1 (MGP_CAROLIEiJ_G0026387)	MGP_CAROLIEiJ_G0026386	MGP_CAROLIEiJ_G0026385	MGP_CAROLIEiJ_G0026384	MGP_CAROLIEiJ_G0026383	MGP_CAROLIEiJ_G0026382	Ebna1bp2 (MGP_CAROLIEiJ_G0026381) #31	Cfap57 (MGP_CAROLIEiJ_G0026380) #32	Tmem125 (MGP_CAROLIEiJ_G0026379) #33	2610528J11Rik (MGP_CAROLIEiJ_G0026378) #34	Tie1 (MGP_CAROLIEiJ_G0026377) #35
Mus_B	ANCESTRAL SPECIES	5	ENSGT00940000161401	ENSGT00950000183053.A	ENSGT00940000157218.C	ENSGT00940000154436.b	ENSGT00940000154436.a	ENSGT00940000160362	ENSGT00530000064266	ENSGT00390000014577.b	ENSGT00390000004248	ENSGT00950000182834.C	ENSGT00390000007816	ENSGT00940000154721.db.b	ENSGT00940000153341.b.p.a.a.a	ENSGT00940000158624	ENSGT00940000158725	ENSGT00390000003084 #22	ENSGT00940000154169.B #23	ENSGT00390000006113 #24	ENSGT00940000160531 #26	ENSGT00940000161958 #27	ENSGT00940000156792 #29	ENSGT00940000160928	ENSGT01090000260044.A.a.b.a.b.c.a.a.b.b.a.b	ENSGT01090000260044.A.a.b.a.b.c.a.a.b.b.a.a	ENSGT01090000260044.A.a.b.a.a.a.a.a.a.a	ENSGT01090000260044.A.a.b.a.a.a.a.b	ENSGT01090000260044.A.a.b.a.a.a.a.a.b	ENSGT01090000260044.A.a.b.a.a.a.b	ENSGT01090000260044.A.a.b.a.a.a.a.a.a.b	ENSGT00390000014984 #31	ENSGT00620000088018.h #32
Mus_C	ANCESTRAL SPECIES	2	ENSGT00940000161401	ENSGT00950000183053.A	ENSGT00940000157218.C	ENSGT00940000154436.b	ENSGT00940000154436.a	ENSGT00940000160362	ENSGT00530000064266	ENSGT00390000014577.b	ENSGT00390000004248	ENSGT00950000182834.C	ENSGT00390000007816	ENSGT00940000154721.db.b	ENSGT00940000153341.b.p.a.a.a	ENSGT00940000158624	ENSGT00940000158725	ENSGT00390000003084 #22	ENSGT00940000154169.B #23	ENSGT00390000006113 #24	ENSGT00940000160531 #26	ENSGT00940000161958 #27	ENSGT00940000156792 #29	ENSGT00940000160928	ENSGT01090000260044.A.a.b.a.b.c.a.a.b.b.a.b	ENSGT01090000260044.A.a.b.a.b.c.a.a.b.b.a.a	ENSGT01090000260044.A.a.b.a.a.a.a.a.a.a	ENSGT01090000260044.A.a.b.a.a.a.a.b	ENSGT01090000260044.A.a.b.a.a.a.a.a.b	ENSGT01090000260044.A.a.b.a.a.a.b	ENSGT01090000260044.A.a.b.a.a.a.a.a.a.b	ENSGT00390000014984 #31	ENSGT00620000088018.h #32
spretus	MODERN SPECIES	13	Edn2 (MGP_SPRETEiJ_G0027384)	Hivep3 (MGP_SPRETEiJ_G0027383)	Guca2b (MGP_SPRETEiJ_G0027382)	Guca2a (MGP_SPRETEiJ_G0027381)	Foxj3 (MGP_SPRETEiJ_G0027380)	Frg2f1 (MGP_SPRETEiJ_G0027379)	Rimkla (MGP_SPRETEiJ_G0027378)	Zmynd12 (MGP_SPRETEiJ_G0027377)	Ppcs (MGP_SPRETEiJ_G0027376)	MGP_SPRETEiJ_G0027375	Ppih (MGP_SPRETEiJ_G0027374)	Ybx1 (MGP_SPRETEiJ_G0027373)	Cldn19 (MGP_SPRETEiJ_G0027372)	P3h1 (MGP_SPRETEiJ_G0027371)	Tmem269 (MGP_SPRETEiJ_G0027370) #23	AU022252 (MGP_SPRETEiJ_G0027369) #22	Svbp (MGP_SPRETEiJ_G0027368) #24	Ermap (MGP_SPRETEiJ_G0027367) #26	Zfp691 (MGP_SPRETEiJ_G0027366) #27	Slc2a1 (MGP_SPRETEiJ_G0027365) #29	Lao1 (MGP_SPRETEiJ_G0027364)	MGP_SPRETEiJ_G0027362	MGP_SPRETEiJ_G0027363	MGP_SPRETEiJ_G0027361	MGP_SPRETEiJ_G0027360	MGP_SPRETEiJ_G0027359	Or13p5 (MGP_SPRETEiJ_G0027358)	Or13p8 (MGP_SPRETEiJ_G0027357)	Or13p3 (MGP_SPRETEiJ_G0027356)	Or13p4 (MGP_SPRETEiJ_G0027355)	Or13p10 (MGP_SPRETEiJ_G0027354)
Steppe mouse	MODERN SPECIES	3192	ENSMSIG00000010554	Foxj3 (ENSMSIG00000010593)	ENSMSIG00000010690	Frg2f1 (ENSMSIG00000010706)	ENSMSIG00000010718	Rimkla (ENSMSIG00000010726)	Zmynd12 (ENSMSIG00000010735)	Ppcs (ENSMSIG00000010759)	Ccdc30 (ENSMSIG00000010771)	ENSMSIG00000010856	Ppih (ENSMSIG00000010898)	ENSMSIG00000011024	Ybx1 (ENSMSIG00000011043)	Cldn19 (ENSMSIG00000011084)	ENSMSIG00000011133	AU022252 (ENSMSIG00000011139) #22	Tmem269 (ENSMSIG00000011160) #23	Svbp (ENSMSIG00000011169) #24	Ermap (ENSMSIG00000011202) #26	Zfp691 (ENSMSIG00000011235) #27	Slc2a1 (ENSMSIG00000011247) #29	Lao1 (ENSMSIG00000011267)	Or10ak7 (ENSMSIG00000011277)	ENSMSIG00000011281
Mouse	MODERN SPECIES	13	Gm55960 (ENSMUSG00000115115)	Hivep3 (ENSMUSG00000028634)	Guca2b (ENSMUSG00000032978)	Guca2a (ENSMUSG00000023247)	Foxj3 (ENSMUSG00000032998)	Frg2f1 (ENSMUSG00000087385)	Rimkla (ENSMUSG00000048899)	Zmynd12 (ENSMUSG00000070806)	Ppcs (ENSMUSG00000028636)	Ccdc30 (ENSMUSG00000028637)	Ppih (ENSMUSG00000060288)	Ybx1 (ENSMUSG00000028639)	Cldn19 (ENSMUSG00000066058)	P3h1 (ENSMUSG00000028641)	Tmem269 (ENSMUSG00000028642) #23	AU022252 (ENSMUSG00000078584) #22	Svbp (ENSMUSG00000028643) #24	Ermap (ENSMUSG00000028644) #26	Zfp691 (ENSMUSG00000045268) #27	Slc2a1 (ENSMUSG00000028645) #29	Lao1 (ENSMUSG00000024903)	Or10ak7 (ENSMUSG00000111259)	Or10ak8 (ENSMUSG00000096705)	Or10ak16 (ENSMUSG00000073768)	Or10ak9 (ENSMUSG00000073769)	Or10ak11 (ENSMUSG00000110947)	Or10ak12 (ENSMUSG00000066061)	Or10ak13 (ENSMUSG00000111159)	Or10ak14 (ENSMUSG00000095218)	Or13p5 (ENSMUSG00000070820)	Or13p8 (ENSMUSG00000070821)
Shrew mouse	MODERN SPECIES	19	Foxo6 (MGP_PahariEiJ_G0028737)	Edn2 (MGP_PahariEiJ_G0028736)	Hivep3 (MGP_PahariEiJ_G0028735)	MGP_PahariEiJ_G0028734	Guca2a (MGP_PahariEiJ_G0028733)	Foxj3 (MGP_PahariEiJ_G0028732)	MGP_PahariEiJ_G0028731	Rimkla (MGP_PahariEiJ_G0028730)	Zmynd12 (MGP_PahariEiJ_G0028729)	Ppcs (MGP_PahariEiJ_G0028728)	MGP_PahariEiJ_G0028727	MGP_PahariEiJ_G0028726	Ybx1 (MGP_PahariEiJ_G0028725)	Cldn19 (MGP_PahariEiJ_G0028724)	P3h1 (MGP_PahariEiJ_G0028723)	MGP_PahariEiJ_G0028722 #22	Tmem269 (MGP_PahariEiJ_G0028721) #23	Svbp (MGP_PahariEiJ_G0028720) #24	Ermap (MGP_PahariEiJ_G0028719) #26	Zfp691 (MGP_PahariEiJ_G0028718) #27	Slc2a1 (MGP_PahariEiJ_G0028717) #29	Lao1 (MGP_PahariEiJ_G0028716)	MGP_PahariEiJ_G0028715	MGP_PahariEiJ_G0028714	MGP_PahariEiJ_G0028713	Ebna1bp2 (MGP_PahariEiJ_G0028712) #31	Cfap57 (MGP_PahariEiJ_G0028711) #32	Tmem125 (MGP_PahariEiJ_G0028710) #33	2610528J11Rik (MGP_PahariEiJ_G0028709) #34	Tie1 (MGP_PahariEiJ_G0028708) #35	Mpl (MGP_PahariEiJ_G0028707) #36
Rat	MODERN SPECIES	15	Hivep3 (ENSRNOG00000009341)	Guca2b (ENSRNOG00000008979)	Guca2a (ENSRNOG00000008849)	Rps27a-ps1 (ENSRNOG00000034246)	Foxj3 (ENSRNOG00000061851)	Rimkla (ENSRNOG00000008625)	ENSRNOG00000069006	Zmynd12 (ENSRNOG00000022199)	Ppcs (ENSRNOG00000008572)	Ccdc30 (ENSRNOG00000008560)	AABR07073146.1 (ENSRNOG00000046174)	Ppih (ENSRNOG00000008489)	Ybx1 (ENSRNOG00000023786)	Cldn19 (ENSRNOG00000007922)	P3h1 (ENSRNOG00000053991)	RGD1564804 (ENSRNOG00000027455) #22	Tmem269 (ENSRNOG00000006658) #23	Svbp (ENSRNOG00000007404) #24	Ermap (ENSRNOG00000000335) #26	Zfp691 (ENSRNOG00000007398) #27	Slc2a1 (ENSRNOG00000007284) #29	Ubb-ps1 (ENSRNOG00000069384)	Lao1 (ENSRNOG00000007232)	Or10ak7 (ENSRNOG00000067935)	ENSRNOG00000063399	Or10ak13 (ENSRNOG00000066045)	Or10ak7f (ENSRNOG00000063242)	Or10ak7b (ENSRNOG00000067801)	Or10ak11 (ENSRNOG00000063479)	Olfr1330-ps1 (ENSRNOG00000068591)	ENSRNOG00000067651
Cricetidae	ANCESTRAL SPECIES	2	ENSGT00950000183053.A	ENSGT00940000157218.C	ENSGT00940000154436.b	ENSGT00940000154436.a	ENSGT00940000160362	ENSGT00390000014577.b	ENSGT00390000004248	ENSGT00950000182834.C	ENSGT00390000007816	ENSGT00940000154721.db.b	ENSGT00940000167024	ENSGT00940000154721.eb	ENSGT00940000153341.b.p.a.a.a	ENSGT00940000158624	ENSGT00940000158725	ENSGT00390000003084 #22	ENSGT00940000154169.B #23	ENSGT00390000006113 #24	ENSGT00940000160531 #26	ENSGT00940000161958 #27	ENSGT00940000156792 #29	ENSGT00940000160928	ENSGT01090000260044.A.a.b.a.b.b	ENSGT01090000260044.A.a.b.a.b.a	ENSGT01090000260044.A.a.b.a.a.a.a.a.a.a	ENSGT01090000260044.A.a.b.a.a.a.a.b	ENSGT01090000260044.A.a.b.a.a.a.a.a.b	ENSGT01090000260044.A.a.b.a.a.a.b	ENSGT01090000260044.A.a.b.a.a.b	ENSGT01090000260044.A.a.b.a.a.a.a.a.a.b	ENSGT00390000014984 #31
Cricetinae	ANCESTRAL SPECIES	5	ENSGT00940000157218.C	ENSGT00900000143347	ENSGT00940000154436.b	ENSGT00940000154436.a	ENSGT00940000160362	ENSGT00390000014577.b	ENSGT00390000004248	ENSGT00950000182834.C	ENSGT00390000007816	ENSGT00940000167024	ENSGT00940000154721.eb	ENSGT00940000153341.b.p.a.b.b.b	ENSGT00940000165203	ENSGT00940000158624	ENSGT00940000158725	ENSGT00390000003084 #22	ENSGT00940000154169.B #23	ENSGT00390000006113 #24	ENSGT00940000160531 #26	ENSGT00940000161958 #27	ENSGT00940000156792 #29	ENSGT00940000160928	ENSGT01090000260044.A.a.b.a.b.a.a.a.a.b	ENSGT01090000260044.A.a.b.a.b.a.a.a.b	ENSGT01090000260044.A.a.b.a.b.a.a.b	ENSGT01090000260044.A.a.b.a.a.a.a.a.a.a	ENSGT01090000260044.A.a.b.a.a.a.a.b	ENSGT01090000260044.A.a.b.a.a.a.a.a.b	ENSGT01090000260044.A.a.b.a.a.a.b	ENSGT01090000260044.A.a.b.a.a.b	ENSGT01090000260044.A.a.b.a.a.a.a.a.a.b
Chinese hamster chok1gshd	MODERN SPECIES	111	Hivep3 (ENSCGRG00001024833)	ENSCGRG00001018314	Guca2b (ENSCGRG00001019230)	Guca2a (ENSCGRG00001020375)	Foxj3 (ENSCGRG00001024073)	ENSCGRG00001005285	Rimkla (ENSCGRG00001011564)	Zmynd12 (ENSCGRG00001013189)	Ppcs (ENSCGRG00001013754)	Ccdc30 (ENSCGRG00001015266)	ENSCGRG00001018996	ENSCGRG00001024101	ENSCGRG00001002534	Cldn19 (ENSCGRG00001003612)	P3h1 (ENSCGRG00001014713)	AU022252 (ENSCGRG00001023179) #22	Tmem269 (ENSCGRG00001023367) #23	Svbp (ENSCGRG00001019425) #24	Ermap (ENSCGRG00001021027) #26	ENSCGRG00001006325 #27	Slc2a1 (ENSCGRG00001024604) #29	Lao1 (ENSCGRG00001001936)	ENSCGRG00001001790	ENSCGRG00001012569	ENSCGRG00001012702	ENSCGRG00001000900	ENSCGRG00001018452	ENSCGRG00001012611	ENSCGRG00001012877	ENSCGRG00001001763	ENSCGRG00001012846
Golden Hamster	MODERN SPECIES	773	Edn2 (ENSMAUG00000004856)	Hivep3 (ENSMAUG00000021204)	ENSMAUG00000020202	Guca2b (ENSMAUG00000010390)	Guca2a (ENSMAUG00000013195)	ENSMAUG00000009384	Rimkla (ENSMAUG00000012694)	Zmynd12 (ENSMAUG00000005478)	Ccdc30 (ENSMAUG00000018957)	ENSMAUG00000009054	ENSMAUG00000012532	ENSMAUG00000016280	ENSMAUG00000016728	Cldn19 (ENSMAUG00000014943)	P3h1 (ENSMAUG00000021789)	AU022252 (ENSMAUG00000006595) #22	Tmem269 (ENSMAUG00000018901) #23	Svbp (ENSMAUG00000007778) #24	Ermap (ENSMAUG00000021042) #26	Zfp691 (ENSMAUG00000010681) #27	Slc2a1 (ENSMAUG00000017803) #29	Lao1 (ENSMAUG00000011260)	ENSMAUG00000022148	ENSMAUG00000014177	Or13p3 (ENSMAUG00000003996)	ENSMAUG00000003674	Or13p10 (ENSMAUG00000004422)	Ebna1bp2 (ENSMAUG00000011372) #31	Cfap57 (ENSMAUG00000015337) #32	Tmem125 (ENSMAUG00000010670) #33	ENSMAUG00000018517
Cricetidae_B	ANCESTRAL SPECIES	2	ENSGT00940000157999	ENSGT00940000161401	ENSGT00950000183053.A	ENSGT00940000157218.C	ENSGT00940000154436.b	ENSGT00940000154436.a	ENSGT00940000160362	ENSGT00390000014577.b	ENSGT00390000004248	ENSGT00950000182834.C	ENSGT00390000007816	ENSGT00940000154721.db.b	ENSGT00940000153341.b.p.a.a.a	ENSGT00940000158624	ENSGT00940000158725	ENSGT00390000003084 #22	ENSGT00940000154169.B #23	ENSGT00390000006113 #24	ENSGT00940000160531 #26	ENSGT00940000161958 #27	ENSGT00940000156792 #29	ENSGT00940000160928	ENSGT01090000260044.A.a.b.a.b.b	ENSGT01090000260044.A.a.b.a.b.a	ENSGT01090000260044.A.a.b.a.a.a.a.a.a.a	ENSGT01090000260044.A.a.b.a.a.a.a.b	ENSGT01090000260044.A.a.b.a.a.a.a.a.b	ENSGT01090000260044.A.a.b.a.a.a.b	ENSGT01090000260044.A.a.b.a.a.a.a.a.a.b	ENSGT00390000014984 #31	ENSGT00620000088018.h #32
Northern American deer mouse	MODERN SPECIES	11	Edn2 (ENSPEMG00000023929)	Hivep3 (ENSPEMG00000009270)	Gm55960 (ENSPEMG00000024634)	ENSPEMG00000025907	Guca2b (ENSPEMG00000018121)	Guca2a (ENSPEMG00000029117)	Foxj3 (ENSPEMG00000024269)	Rimkla (ENSPEMG00000023677)	Zmynd12 (ENSPEMG00000023152)	Ppcs (ENSPEMG00000024213)	Ccdc30 (ENSPEMG00000022709)	Ppih (ENSPEMG00000011063)	Ybx1 (ENSPEMG00000002276)	Cldn19 (ENSPEMG00000025558)	P3h1 (ENSPEMG00000001330)	AU022252 (ENSPEMG00000018660) #22	Tmem269 (ENSPEMG00000006920) #23	Svbp (ENSPEMG00000031075) #24	Ermap (ENSPEMG00000009182) #26	Zfp691 (ENSPEMG00000009008) #27	Slc2a1 (ENSPEMG00000023507) #29	Lao1 (ENSPEMG00000024040)	ENSPEMG00000029652	ENSPEMG00000028436	ENSPEMG00000030287	ENSPEMG00000027546	ENSPEMG00000028893	ENSPEMG00000028049	ENSPEMG00000024455	ENSPEMG00000026809	Or13p5 (ENSPEMG00000007833)
Prairie vole	MODERN SPECIES	1	Scmh1 (ENSMOCG00000001256)	Foxo6 (ENSMOCG00000007735)	Edn2 (ENSMOCG00000009940)	Hivep3 (ENSMOCG00000012152)	Guca2b (ENSMOCG00000011621)	Guca2a (ENSMOCG00000018839)	Foxj3 (ENSMOCG00000021577)	Rimkla (ENSMOCG00000020203)	Zmynd12 (ENSMOCG00000005965)	Ppcs (ENSMOCG00000009579)	Ccdc30 (ENSMOCG00000005423)	ENSMOCG00000012270	ENSMOCG00000021351	Cldn19 (ENSMOCG00000011268)	P3h1 (ENSMOCG00000016299)	AU022252 (ENSMOCG00000018365) #22	Tmem269 (ENSMOCG00000014096) #23	ENSMOCG00000021602 #24	ENSMOCG00000009079	Ermap (ENSMOCG00000020543) #26	Zfp691 (ENSMOCG00000009065) #27	Slc2a1 (ENSMOCG00000021632) #29	Lao1 (ENSMOCG00000001605)	ENSMOCG00000015307	ENSMOCG00000022413	ENSMOCG00000012714	Or13p8 (ENSMOCG00000008289)	ENSMOCG00000005805	Cyp2j6 (ENSMOCG00000018597)	ENSMOCG00000010318	Gm12695 (ENSMOCG00000013607)
Upper Galilee mountains blind mole rat	MODERN SPECIES	1213									Ppcs (ENSNGAG00000011477)	Ccdc30 (ENSNGAG00000013205)	ENSNGAG00000012254	ENSNGAG00000013511	Ybx1 (ENSNGAG00000015432)	Cldn19 (ENSNGAG00000017810)	P3h1 (ENSNGAG00000011079)	AU022252 (ENSNGAG00000018582) #22	Tmem269 (ENSNGAG00000000755) #23	Svbp (ENSNGAG00000010080) #24	ENSNGAG00000010442 #26	Zfp691 (ENSNGAG00000010599) #27	Slc2a1 (ENSNGAG00000012002) #29
Lesser Egyptian jerboa	MODERN SPECIES	188	Foxo6 (ENSJJAG00000016967)	Edn2 (ENSJJAG00000016538)	Hivep3 (ENSJJAG00000011284)	ENSJJAG00000009743	Guca2a (ENSJJAG00000009524)	Foxj3 (ENSJJAG00000018049)	Rimkla (ENSJJAG00000011118)	Zmynd12 (ENSJJAG00000010097)	Ppcs (ENSJJAG00000009656)	ENSJJAG00000004047	Ccdc30 (ENSJJAG00000023941)	ENSJJAG00000006568	ENSJJAG00000016017	Cldn19 (ENSJJAG00000014962)	P3h1 (ENSJJAG00000011354)	AU022252 (ENSJJAG00000010568) #22	Tmem269 (ENSJJAG00000009589) #23	ENSJJAG00000024006
Kangaroo rat	MODERN SPECIES	352	Scmh1 (ENSDORG00000004955)	Foxo6 (ENSDORG00000024053)	Edn2 (ENSDORG00000006073)	Hivep3 (ENSDORG00000006074)	ENSDORG00000015916	Guca2a (ENSDORG00000015837)	Foxj3 (ENSDORG00000015838)	Rimkla (ENSDORG00000015839)	Zmynd12 (ENSDORG00000015840)	Ppcs (ENSDORG00000015843)	ENSDORG00000008148	ENSDORG00000016152	Ybx1 (ENSDORG00000016627)	Cldn19 (ENSDORG00000011262)	P3h1 (ENSDORG00000011264)	AU022252 (ENSDORG00000011265) #22	Tmem269 (ENSDORG00000023354) #23	Svbp (ENSDORG00000029314) #24	Ermap (ENSDORG00000011268) #26	Zfp691 (ENSDORG00000027786) #27	Slc2a1 (ENSDORG00000011923) #29	Lao1 (ENSDORG00000028962)	Ebna1bp2 (ENSDORG00000007797) #31	Cfap57 (ENSDORG00000007799) #32	Tmem125 (ENSDORG00000023586) #33	2610528J11Rik (ENSDORG00000007013) #34	ENSDORG00000007010 #35	Tie1 (ENSDORG00000024284) #35	Mpl (ENSDORG00000014766) #36	Cdc20 (ENSDORG00000014768) #37	Elovl1 (ENSDORG00000014773)
Lagomorpha	ANCESTRAL SPECIES	8	ENSGT00940000157999	ENSGT00940000161401	ENSGT00950000183053.A	ENSGT00940000157218.C	ENSGT00970000194001	ENSGT00940000154436.b	ENSGT00940000154436.a	ENSGT00940000160362	ENSGT00390000014577.b	ENSGT00390000004248	ENSGT00390000007816	ENSGT00940000154721	ENSGT00940000153341.b.p.a.a.a	ENSGT00940000158624	ENSGT00940000158725	ENSGT00390000003084 #22	ENSGT01050000245090	ENSGT00390000006113 #24	ENSGT00940000160531 #26	ENSGT00940000161958 #27	ENSGT00940000156792 #29	ENSGT00940000160928	ENSGT01090000260044.A.a.b.a.b	ENSGT01090000260044.A.a.b.a.a.a.a.a.a.a	ENSGT01090000260044.A.a.b.a.a.a.a.b	ENSGT01090000260044.A.a.b.a.a.a.a.a.b	ENSGT01090000260044.A.a.b.a.a.a.b	ENSGT01090000260044.A.a.b.a.a.b	ENSGT01090000260044.A.a.b.a.a.a.a.a.a.b	ENSGT00390000006224 #30	ENSGT00390000014984 #31
Rabbit	MODERN SPECIES	4	SLFNL1 (ENSOCUG00000004701)	SCMH1 (ENSOCUG00000004703)	ENSOCUG00000001201	HIVEP3 (ENSOCUG00000001203)	ENSOCUG00000034241	ENSOCUG00000011637	GUCA2A (ENSOCUG00000011644)	FOXJ3 (ENSOCUG00000011647)	RIMKLA (ENSOCUG00000014732)	ZMYND12 (ENSOCUG00000012139)	CCDC30 (ENSOCUG00000011428)	ENSOCUG00000011453	ENSOCUG00000028047	CLDN19 (ENSOCUG00000026826)	P3H1 (ENSOCUG00000005602)	C1orf50 (ENSOCUG00000026605) #22	TMEM269 (ENSOCUG00000005607)	ENSOCUG00000014170 #24	ERMAP (ENSOCUG00000024005) #26	ZNF691 (ENSOCUG00000005611) #27	SLC2A1 (ENSOCUG00000005924) #29	ENSOCUG00000001679	ENSOCUG00000026602	ENSOCUG00000022397	ENSOCUG00000026265	ENSOCUG00000035400	ENSOCUG00000021538	ENSOCUG00000017916	ENSOCUG00000021639	CFAP144 (ENSOCUG00000017914) #30	EBNA1BP2 (ENSOCUG00000005103) #31
Pika	MODERN SPECIES	4904													ENSOPRG00000008050	CLDN19 (ENSOPRG00000008063)	P3H1 (ENSOPRG00000008068)	C1orf50 (ENSOPRG00000008102) #22	SVBP (ENSOPRG00000008110) #24	ENSOPRG00000008123
Tree shrew	MODERN SPECIES	5402									ENSTBEG00000014628	ZMYND12 (ENSTBEG00000014693)	PPCS (ENSTBEG00000015068)	ENSTBEG00000015146	PPIH (ENSTBEG00000015485)	ENSTBEG00000015642	P3H1 (ENSTBEG00000015860)	C1orf50 (ENSTBEG00000016220) #22	ENSTBEG00000016306 #23	SVBP (ENSTBEG00000016338) #24	ERMAP (ENSTBEG00000016400) #26	ZNF691 (ENSTBEG00000016521) #27	SLC2A1 (ENSTBEG00000016535) #29
Laurasiatheria	ANCESTRAL SPECIES		ENSGT00970000194001	ENSGT00940000154436.b	ENSGT00940000154436.a	ENSGT00940000160362	ENSGT00390000014577.b	ENSGT00390000004248	ENSGT00950000182834.C	ENSGT00390000000654	ENSGT00940000167024	ENSGT00390000007816	ENSGT00700000105447	ENSGT00940000154721	ENSGT00940000153341.b.p.a.a	ENSGT00940000158624	ENSGT00940000158725	ENSGT00390000003084 #22	ENSGT00940000154169.B #23	ENSGT00390000006113 #24	ENSGT00940000160531 #26	ENSGT00940000161958 #27	ENSGT00940000156792 #29	ENSGT00940000160928	ENSGT01090000260044.A.a.b.a.b	ENSGT01090000260044.A.a.b.a.a.a.a.a.a.a	ENSGT01090000260044.A.a.b.a.a.a.a.b	ENSGT01090000260044.A.a.b.a.a.a.a.a.b	ENSGT01090000260044.A.a.b.a.a.a.b	ENSGT01090000260044.A.a.b.a.a.b	ENSGT01090000260044.A.a.b.a.a.a.a.a.a.b	ENSGT00390000006224 #30	ENSGT00390000014984 #31
Eulipotyphla	ANCESTRAL SPECIES	1375															ENSGT00940000158725	ENSGT00390000003084 #22
Hedgehog	DUPLICATION
Hedgehog	DUPLICATION
Hedgehog	MODERN SPECIES	10376																ENSEEUG00000008640 #22
Hedgehog	MODERN SPECIES	10690																ENSEEUG00000009791 #22
Hedgehog	MODERN SPECIES	1899															P3H1 (ENSEEUG00000014999)	ENSEEUG00000015112 #22
Laurasiatheria_a	ANCESTRAL SPECIES		ENSGT00970000194001	ENSGT00940000154436.b	ENSGT00940000154436.a	ENSGT00940000160362	ENSGT00390000014577.b	ENSGT00390000004248	ENSGT00950000182834.C	ENSGT00390000000654	ENSGT00940000167024	ENSGT00390000007816	ENSGT00700000105447	ENSGT00940000154721	ENSGT00940000153341.b.p.a.a	ENSGT00940000158624	ENSGT00940000158725	ENSGT00390000003084 #22	ENSGT00940000154169.B #23	ENSGT00390000006113 #24	ENSGT00940000160531 #26	ENSGT00940000161958 #27	ENSGT00940000156792 #29	ENSGT00940000160928	ENSGT01090000260044.A.a.b.a.b	ENSGT01090000260044.A.a.b.a.a.a.a.a.a.a	ENSGT01090000260044.A.a.b.a.a.a.a.b	ENSGT01090000260044.A.a.b.a.a.a.a.a.b	ENSGT01090000260044.A.a.b.a.a.a.b	ENSGT01090000260044.A.a.b.a.a.b	ENSGT01090000260044.A.a.b.a.a.a.a.a.a.b	ENSGT00390000006224 #30	ENSGT00390000014984 #31
Artiodactyla	ANCESTRAL SPECIES		ENSGT00950000183053.A	ENSGT00940000157218.C	ENSGT00970000194001	ENSGT00940000154436.b	ENSGT00940000154436.a	ENSGT00940000160362	ENSGT00390000014577.b	ENSGT00390000004248	ENSGT00950000182834.C	ENSGT00390000007816	ENSGT00700000105447	ENSGT00940000154721	ENSGT00940000153341.b.p.a.a	ENSGT00940000158624	ENSGT00940000158725	ENSGT00390000003084 #22	ENSGT00940000154169.B #23	ENSGT00390000006113 #24	ENSGT00940000160531 #26	ENSGT00940000161958 #27	ENSGT00940000156792 #29	ENSGT00940000160928	ENSGT01090000260044.A.a.b.a.b	ENSGT01090000260044.A.a.b.a.a.a.a.a.a.a	ENSGT01090000260044.A.a.b.a.a.a.a.b	ENSGT01090000260044.A.a.b.a.a.a.a.a.b	ENSGT01090000260044.A.a.b.a.a.a.b	ENSGT01090000260044.A.a.b.a.a.b	ENSGT01090000260044.A.a.b.a.a.a.a.a.a.b	ENSGT00390000006224 #30	ENSGT00390000014984 #31
Suina	ANCESTRAL SPECIES	27	ENSGT00940000161401	ENSGT00950000183053.A	ENSGT00940000157218.C	ENSGT00970000194001	ENSGT00940000154436.b	ENSGT00940000154436.a	ENSGT00940000160362	ENSGT00390000014577.b	ENSGT00390000004248	ENSGT00950000182834.C	ENSGT00390000007816	ENSGT00940000154721	ENSGT00940000153341.b.p.a.a	ENSGT00940000158624	ENSGT00940000158725	ENSGT00390000003084 #22	ENSGT00940000154169.B #23	ENSGT00390000006113 #24	ENSGT00940000160531 #26	ENSGT00940000161958 #27	ENSGT00940000156792 #29	ENSGT01090000260044.A.a.b.a.a.a.a.a.a.a	ENSGT01090000260044.A.a.b.a.a.a.a.b	ENSGT01090000260044.A.a.b.a.a.a.a.a.b	ENSGT01090000260044.A.a.b.a.a.a.b	ENSGT01090000260044.A.a.b.a.a.a.a.a.a.b	ENSGT00390000006224 #30	ENSGT00390000014984 #31	ENSGT00620000088018.h #32	ENSGT00390000003015 #33	ENSGT00510000048988 #34
Chacoan peccary	MODERN SPECIES	54	FOXO6 (ENSCWAG00000011217)	EDN2 (ENSCWAG00000011186)	HIVEP3 (ENSCWAG00000011126)	ENSCWAG00000011100	GUCA2B (ENSCWAG00000011060)	GUCA2A (ENSCWAG00000011019)	FOXJ3 (ENSCWAG00000010849)	RIMKLA (ENSCWAG00000010781)	ZMYND12 (ENSCWAG00000010714)	PPCS (ENSCWAG00000010645)	ENSCWAG00000010546	ENSCWAG00000010479	PPIH (ENSCWAG00000010368)	CLDN19 (ENSCWAG00000010218)	P3H1 (ENSCWAG00000010147)	C1orf50 (ENSCWAG00000010091) #22	ENSCWAG00000010066 #23	SVBP (ENSCWAG00000010035) #24	ERMAP (ENSCWAG00000009847) #26	ZNF691 (ENSCWAG00000009781) #27	SLC2A1 (ENSCWAG00000009728) #29	ENSCWAG00000009692	ENSCWAG00000009668	ENSCWAG00000009633	ENSCWAG00000009599	ENSCWAG00000009583	CFAP144 (ENSCWAG00000009545) #30	EBNA1BP2 (ENSCWAG00000009479) #31	CFAP57 (ENSCWAG00000009303) #32	TMEM125 (ENSCWAG00000009273) #33	C1orf210 (ENSCWAG00000009247) #34
Pig	MODERN SPECIES	14	SCMH1 (ENSSSCG00000003971)	FOXO6 (ENSSSCG00000035074)	EDN2 (ENSSSCG00000037856)	ENSSSCG00000061658	GUCA2B (ENSSSCG00000003970)	GUCA2A (ENSSSCG00000055523)	FOXJ3 (ENSSSCG00000023266)	RIMKLA (ENSSSCG00000055268)	ZMYND12 (ENSSSCG00000003967)	PPCS (ENSSSCG00000058636)	ENSSSCG00000003965	PPIH (ENSSSCG00000003964)	ENSSSCG00000028485	CLDN19 (ENSSSCG00000034921)	P3H1 (ENSSSCG00000023920)	ENSSSCG00000027374 #22	ENSSSCG00000039678 #23	ENSSSCG00000060526 #24	ERMAP (ENSSSCG00000021745) #26	ZNF691 (ENSSSCG00000040559) #27	SLC2A1 (ENSSSCG00000059879) #29	ENSSSCG00000039458	ENSSSCG00000032230	ENSSSCG00000003960	ENSSSCG00000003959	ENSSSCG00000003958	ENSSSCG00000003957	ENSSSCG00000003955	CFAP144 (ENSSSCG00000003954) #30	EBNA1BP2 (ENSSSCG00000030177) #31	CFAP57 (ENSSSCG00000023904) #32
Artiodactyla_a	ANCESTRAL SPECIES		ENSGT00950000183053.A	ENSGT00940000157218.C	ENSGT00970000194001	ENSGT00940000154436.b	ENSGT00940000154436.a	ENSGT00940000160362	ENSGT00390000014577.b	ENSGT00390000004248	ENSGT00950000182834.C	ENSGT00390000007816	ENSGT00700000105447	ENSGT00940000154721	ENSGT00940000153341.b.p.a.a	ENSGT00940000158624	ENSGT00940000158725	ENSGT00390000003084 #22	ENSGT00940000154169.B #23	ENSGT00390000006113 #24	ENSGT00940000160531 #26	ENSGT00940000161958 #27	ENSGT00940000156792 #29	ENSGT00940000160928	ENSGT01090000260044.A.a.b.a.b	ENSGT01090000260044.A.a.b.a.a.a.a.a.a.a	ENSGT01090000260044.A.a.b.a.a.a.a.b	ENSGT01090000260044.A.a.b.a.a.a.a.a.b	ENSGT01090000260044.A.a.b.a.a.a.b	ENSGT01090000260044.A.a.b.a.a.b	ENSGT01090000260044.A.a.b.a.a.a.a.a.a.b	ENSGT00390000006224 #30	ENSGT00390000014984 #31
Camelidae	ANCESTRAL SPECIES	11	ENSGT00940000157999	ENSGT00940000161401	ENSGT00950000183053.A	ENSGT00940000157218.C	ENSGT00940000154436.b	ENSGT00940000154436.a	ENSGT00940000160362	ENSGT00390000014577.b.i	ENSGT00390000004248	ENSGT00950000182834.C	ENSGT00390000007816	ENSGT00940000154721	ENSGT00940000153341.b.p.a.a	ENSGT00940000158624	ENSGT00940000158725	ENSGT00390000003084 #22	ENSGT00940000154169.B #23	ENSGT00390000006113 #24	ENSGT00940000160531 #26	ENSGT00940000161958 #27	ENSGT00940000156792 #29	ENSGT00940000160928	ENSGT01090000260044.A.a.b.a.a.a.a.a.a.a	ENSGT01090000260044.A.a.b.a.a.a.a.b	ENSGT01090000260044.A.a.b.a.a.a.a.a.b	ENSGT00390000006224 #30	ENSGT00390000014984 #31	ENSGT00620000088018.h #32	ENSGT00390000003015 #33	ENSGT00510000048988 #34	ENSGT00940000157693 #35
Alpaca	MODERN SPECIES	23															ENSVPAG00000011325	C1orf50 (ENSVPAG00000011326) #22	SVBP (ENSVPAG00000011327) #24	ERMAP (ENSVPAG00000011329) #26	ZNF691 (ENSVPAG00000011330) #27
Arabian camel	MODERN SPECIES	4	FOXO6 (ENSCDRG00005015434)	EDN2 (ENSCDRG00005015453)	HIVEP3 (ENSCDRG00005015500)	ENSCDRG00005015546	GUCA2B (ENSCDRG00005015564)	GUCA2A (ENSCDRG00005015592)	FOXJ3 (ENSCDRG00005015630)	ENSCDRG00005015740	ZMYND12 (ENSCDRG00005015787)	PPCS (ENSCDRG00005015813)	CCDC30 (ENSCDRG00005015907)	PPIH (ENSCDRG00005016482)	ENSCDRG00005016631	CLDN19 (ENSCDRG00005016715)	P3H1 (ENSCDRG00005016774)	C1orf50 (ENSCDRG00005016859) #22	ENSCDRG00005016883 #23	SVBP (ENSCDRG00005016909) #24	ERMAP (ENSCDRG00005006655) #26	ZNF691 (ENSCDRG00005006794) #27	SLC2A1 (ENSCDRG00005006838) #29	ENSCDRG00005006921	ENSCDRG00005007056	ENSCDRG00005007096 #30	ENSCDRG00005007141	ENSCDRG00005007187	ENSCDRG00005007195	ENSCDRG00005007207 #30	EBNA1BP2 (ENSCDRG00005007253) #31	CFAP57 (ENSCDRG00005007275) #32	TMEM125 (ENSCDRG00005007306) #33
Artiodactyla_b	ANCESTRAL SPECIES		ENSGT00940000157218.C	ENSGT00970000194001	ENSGT00940000154436.b	ENSGT00940000154436.a	ENSGT00940000160362	ENSGT00390000014577.b	ENSGT00390000004248	ENSGT00950000182834.C	ENSGT00390000007816	ENSGT00700000105447	ENSGT00940000154721	ENSGT00940000153341.b.p.a.b.b	ENSGT00940000153341.b.p.a.a	ENSGT00940000158624	ENSGT00940000158725	ENSGT00390000003084 #22	ENSGT00940000154169.B #23	ENSGT00390000006113 #24	ENSGT00940000160531 #26	ENSGT00940000161958 #27	ENSGT00940000156792 #29	ENSGT00940000160928	ENSGT01090000260044.A.a.b.a.b	ENSGT01090000260044.A.a.b.a.a.a.a.a.a.a	ENSGT01090000260044.A.a.b.a.a.a.a.b	ENSGT01090000260044.A.a.b.a.a.a.a.a.b	ENSGT01090000260044.A.a.b.a.a.a.b	ENSGT01090000260044.A.a.b.a.a.b	ENSGT01090000260044.A.a.b.a.a.a.a.a.a.b	ENSGT00390000006224 #30	ENSGT00390000014984 #31
Cetacea	ANCESTRAL SPECIES		ENSGT00950000183053.A	ENSGT00940000157218.C	ENSGT00940000154436.b	ENSGT00940000154436.a	ENSGT00940000160362	ENSGT00390000014577.b	ENSGT00390000004248	ENSGT00950000182834.C	ENSGT00390000007816	ENSGT00940000167024	ENSGT00940000154721.wb	ENSGT00940000153341.b.p.a.b.b	ENSGT00940000153341.b.p.a.a	ENSGT00940000158624	ENSGT00940000158725	ENSGT00390000003084 #22	ENSGT00940000154169.B #23	ENSGT00390000006113 #24	ENSGT00940000160531 #26	ENSGT00940000161958 #27	ENSGT00940000156792 #29	ENSGT00940000160928	ENSGT01090000260044.A.a.b.a.b	ENSGT00390000006224 #30	ENSGT00390000014984 #31	ENSGT00620000088018.h #32	ENSGT00390000003015 #33	ENSGT00510000048988 #34	ENSGT00940000155028.q.a.d	ENSGT00940000157693 #35	ENSGT00940000161225 #36
Odontoceti	ANCESTRAL SPECIES		ENSGT00950000183053.A	ENSGT00940000157218.C	ENSGT00940000154436.b	ENSGT00940000154436.a	ENSGT00940000160362	ENSGT00390000014577.b	ENSGT00390000004248	ENSGT00950000182834.C	ENSGT00390000007816	ENSGT00940000167024	ENSGT00940000154721.wb	ENSGT00940000153341.b.p.a.b.b	ENSGT00940000153341.b.p.a.a	ENSGT00940000158624	ENSGT00940000158725	ENSGT00390000003084 #22	ENSGT00940000154169.B #23	ENSGT00390000006113 #24	ENSGT00940000160531 #26	ENSGT00940000161958 #27	ENSGT00940000156792 #29	ENSGT00940000160928	ENSGT01090000260044.A.a.b.a.b	ENSGT00390000006224 #30	ENSGT00390000014984 #31	ENSGT00620000088018.h #32	ENSGT00390000003015 #33	ENSGT00510000048988 #34	ENSGT00940000155028.q.a.d	ENSGT00940000157693 #35	ENSGT00940000161225 #36
Odontoceti_a	ANCESTRAL SPECIES		ENSGT00950000183053.A	ENSGT00940000157218.C	ENSGT00940000154436.b	ENSGT00940000154436.a	ENSGT00940000160362	ENSGT00390000014577.b	ENSGT00390000004248	ENSGT00950000182834.C	ENSGT00390000007816	ENSGT00940000167024	ENSGT00940000154721.wb	ENSGT00940000153341.b.p.a.b.b	ENSGT00940000153341.b.p.a.a	ENSGT00940000158624	ENSGT00940000158725	ENSGT00390000003084 #22	ENSGT00940000154169.B #23	ENSGT00390000006113 #24	ENSGT00940000160531 #26	ENSGT00940000161958 #27	ENSGT00940000156792 #29	ENSGT00940000160928	ENSGT01090000260044.A.a.b.a.b	ENSGT00390000006224 #30	ENSGT00390000014984 #31	ENSGT00620000088018.h #32	ENSGT00390000003015 #33	ENSGT00510000048988 #34	ENSGT00940000157693 #35	ENSGT00940000161225 #36	ENSGT00950000183104.A.a.a #37
Odontoceti_b	ANCESTRAL SPECIES		ENSGT00390000018145.xc.a.b	ENSGT00950000183053.A	ENSGT00940000157218.C	ENSGT00940000154436.b	ENSGT00940000154436.a	ENSGT00940000160362	ENSGT00390000014577.b	ENSGT00390000004248	ENSGT00950000182834.C	ENSGT00390000007816	ENSGT00940000167024	ENSGT00940000154721.wb	ENSGT00940000153341.b.p.a.b.b	ENSGT00940000158624	ENSGT00940000158725	ENSGT00390000003084 #22	ENSGT00940000154169.B #23	ENSGT00390000006113 #24	ENSGT00940000161958 #27	ENSGT00940000156792 #29	ENSGT00940000160928	ENSGT01090000260044.A.a.b.a.b	ENSGT00390000006224 #30	ENSGT00390000014984 #31	ENSGT00620000088018.h #32	ENSGT00390000003015 #33	ENSGT00510000048988 #34	ENSGT00940000157693 #35	ENSGT00940000161225 #36	ENSGT00950000183104.A.a.a #37	ENSGT01050000244838.H.d
Monodontidae	ANCESTRAL SPECIES		ENSGT00390000018145.xc.a.b	ENSGT00950000183053.A	ENSGT00940000157218.C	ENSGT00940000154436.b	ENSGT00940000154436.a	ENSGT00940000160362	ENSGT00390000014577.b	ENSGT00390000004248	ENSGT00950000182834.C	ENSGT00390000007816	ENSGT00940000167024	ENSGT00940000154721.wb	ENSGT00940000153341.b.p.a.a	ENSGT00940000158624	ENSGT00940000158725	ENSGT00390000003084 #22	ENSGT00940000154169.B #23	ENSGT00390000006113 #24	ENSGT00940000161958 #27	ENSGT00940000156792 #29	ENSGT00940000160928	ENSGT01090000260044.A.a.b.a.b	ENSGT00390000006224 #30	ENSGT00390000014984 #31	ENSGT00620000088018.h #32	ENSGT00390000003015 #33	ENSGT00510000048988 #34	ENSGT00940000157693 #35	ENSGT00940000161225 #36	ENSGT00950000183104.A.a.a #37	ENSGT01050000244838.H.d
Narwhal	MODERN SPECIES	304	FOXO6 (ENSMMNG00015008018)	ENSMMNG00015008007	EDN2 (ENSMMNG00015007991)	HIVEP3 (ENSMMNG00015007974)	GUCA2B (ENSMMNG00015007941)	GUCA2A (ENSMMNG00015007926)	FOXJ3 (ENSMMNG00015007886)	RIMKLA (ENSMMNG00015007858)	ZMYND12 (ENSMMNG00015007834)	PPCS (ENSMMNG00015007805)	CCDC30 (ENSMMNG00015007748)	PPIH (ENSMMNG00015007690)	YBX1 (ENSMMNG00015007648)	CLDN19 (ENSMMNG00015007624)	P3H1 (ENSMMNG00015007575)	C1orf50 (ENSMMNG00015007545) #22	TMEM269 (ENSMMNG00015007521)	SVBP (ENSMMNG00015007502) #24	ZNF691 (ENSMMNG00015007480) #27	ENSMMNG00015007458	SLC2A1 (ENSMMNG00015007427) #29	ENSMMNG00015007379	CFAP144 (ENSMMNG00015007355) #30	EBNA1BP2 (ENSMMNG00015007327) #31	CFAP57 (ENSMMNG00015007260) #32	TMEM125 (ENSMMNG00015007230) #33	C1orf210 (ENSMMNG00015007209) #34	TIE1 (ENSMMNG00015007163) #35	MPL (ENSMMNG00015007116) #36	CDC20 (ENSMMNG00015007090) #37	ELOVL1 (ENSMMNG00015007061)
Beluga whale	MODERN SPECIES	74	EDN2 (ENSDLEG00000021581)	HIVEP3 (ENSDLEG00000021584)	ENSDLEG00000021586	GUCA2B (ENSDLEG00000021590)	GUCA2A (ENSDLEG00000021593)	FOXJ3 (ENSDLEG00000021596)	RIMKLA (ENSDLEG00000021602)	ZMYND12 (ENSDLEG00000021604)	PPCS (ENSDLEG00000021607)	ENSDLEG00000021610	ENSDLEG00000021612	PPIH (ENSDLEG00000021616)	ENSDLEG00000021624	CLDN19 (ENSDLEG00000021627)	P3H1 (ENSDLEG00000021628)	CUNH1orf50 (ENSDLEG00000021632) #22	TMEM269 (ENSDLEG00000021634) #23	SVBP (ENSDLEG00000021636) #24	ENSDLEG00000021637	ZNF691 (ENSDLEG00000021639) #27	ENSDLEG00000021641	SLC2A1 (ENSDLEG00000021645) #29	ENSDLEG00000021652	ENSDLEG00000021653	CFAP144 (ENSDLEG00000021655) #30	EBNA1BP2 (ENSDLEG00000021657) #31	CFAP57 (ENSDLEG00000021663) #32	TMEM125 (ENSDLEG00000021673) #33	CUNH1orf210 (ENSDLEG00000021675) #34	TIE1 (ENSDLEG00000021678) #35	MPL (ENSDLEG00000021691) #36
Vaquita	MODERN SPECIES		EDN2 (ENSPSNG00000001170)	HIVEP3 (ENSPSNG00000001194)	ENSPSNG00000001210	ENSPSNG00000001228	GUCA2B (ENSPSNG00000001245)	GUCA2A (ENSPSNG00000001265)	FOXJ3 (ENSPSNG00000001302)	RIMKLA (ENSPSNG00000001330)	ZMYND12 (ENSPSNG00000001355)	PPCS (ENSPSNG00000001382)	CCDC30 (ENSPSNG00000001449)	PPIH (ENSPSNG00000001568)	ENSPSNG00000001610	CLDN19 (ENSPSNG00000001633)	P3H1 (ENSPSNG00000001672)	C1orf50 (ENSPSNG00000001717) #22	TMEM269 (ENSPSNG00000001731)	SVBP (ENSPSNG00000001745) #24	ZNF691 (ENSPSNG00000001763) #27	ENSPSNG00000001793	SLC2A1 (ENSPSNG00000001817) #29	ENSPSNG00000001857	ENSPSNG00000001980	CFAP144 (ENSPSNG00000002097) #30	EBNA1BP2 (ENSPSNG00000002122) #31	CFAP57 (ENSPSNG00000002159) #32	TMEM125 (ENSPSNG00000002216) #33	C1orf210 (ENSPSNG00000002229) #34	TIE1 (ENSPSNG00000002270) #35	MPL (ENSPSNG00000002348) #36	CDC20 (ENSPSNG00000002393) #37
Dolphin	MODERN SPECIES	6588																C1orf50 (ENSTTRG00000014537) #22	SVBP (ENSTTRG00000014536) #24	ENSTTRG00000014535 #26
Sperm whale	MODERN SPECIES	14	SCMH1 (ENSPCTG00005000419)	EDN2 (ENSPCTG00005000271)	ENSPCTG00005000247	ENSPCTG00005000219	GUCA2B (ENSPCTG00005000211)	GUCA2A (ENSPCTG00005000204)	FOXJ3 (ENSPCTG00005020773)	RIMKLA (ENSPCTG00005020737)	ZMYND12 (ENSPCTG00005020695)	PPCS (ENSPCTG00005020632)	CCDC30 (ENSPCTG00005020273)	PPIH (ENSPCTG00005020154)	YBX1 (ENSPCTG00005020123)	CLDN19 (ENSPCTG00005020001)	P3H1 (ENSPCTG00005019953)	C1orf50 (ENSPCTG00005019888) #22	ENSPCTG00005019858 #23	SVBP (ENSPCTG00005019838) #24	ZNF691 (ENSPCTG00005019753) #27	ENSPCTG00005019688	SLC2A1 (ENSPCTG00005019653) #29	ENSPCTG00005019590	ENSPCTG00005019515	FAM183A (ENSPCTG00005019482) #30	EBNA1BP2 (ENSPCTG00005019454) #31	CFAP57 (ENSPCTG00005019022) #32	TMEM125 (ENSPCTG00005019000) #33	C3H1orf210 (ENSPCTG00005018962) #34	ENSPCTG00005018926	TIE1 (ENSPCTG00005018633) #35	MPL (ENSPCTG00005018368) #36
Blue whale	MODERN SPECIES		EDN2 (ENSBMSG00010010097)	HIVEP3 (ENSBMSG00010010109)	ENSBMSG00010010121	ENSBMSG00010010128	GUCA2B (ENSBMSG00010010144)	GUCA2A (ENSBMSG00010010152)	FOXJ3 (ENSBMSG00010010186)	RIMKLA (ENSBMSG00010010236)	ZMYND12 (ENSBMSG00010010252)	PPCS (ENSBMSG00010010269)	CCDC30 (ENSBMSG00010010308)	ENSBMSG00010010377	YBX1 (ENSBMSG00010010405)	CLDN19 (ENSBMSG00010010425)	P3H1 (ENSBMSG00010010456)	C1orf50 (ENSBMSG00010010485) #22	TMEM269 (ENSBMSG00010010497)	SVBP (ENSBMSG00010010511) #24	ZNF691 (ENSBMSG00010010530) #27	ENSBMSG00010010544	SLC2A1 (ENSBMSG00010010558) #29	ENSBMSG00010010569	CFAP144 (ENSBMSG00010010583) #30	EBNA1BP2 (ENSBMSG00010010600) #31	CFAP57 (ENSBMSG00010010615) #32	TMEM125 (ENSBMSG00010010677) #33	C1orf210 (ENSBMSG00010010682) #34	TIE1 (ENSBMSG00010010706) #35	MPL (ENSBMSG00010010732) #36	ENSBMSG00010010760 #37	ELOVL1 (ENSBMSG00010010782)
Pecora	ANCESTRAL SPECIES	2	ENSGT00940000157218.C	ENSGT00970000194001	ENSGT00940000154436.b	ENSGT00940000154436.a	ENSGT00940000160362	ENSGT00390000014577.b	ENSGT00390000004248	ENSGT00950000182834.C	ENSGT00390000007816	ENSGT00940000154721.yb	ENSGT00700000105447	ENSGT00940000154721.xb.a	ENSGT00940000153341.b.p.a.a	ENSGT00940000158624	ENSGT00940000158725	ENSGT00390000003084 #22	ENSGT00940000154169.B #23	ENSGT00390000006113 #24	ENSGT00940000160531 #26	ENSGT00940000161958 #27	ENSGT00940000156792 #29	ENSGT00940000160928	ENSGT01090000260044.A.a.b.a.b.e.b	ENSGT01090000260044.A.a.b.a.b.f	ENSGT01090000260044.A.a.b.a.a.a.a.a.a.a	ENSGT01090000260044.A.a.b.a.a.a.a.b	ENSGT01090000260044.A.a.b.a.a.a.a.a.b	ENSGT01090000260044.A.a.b.a.a.a.b	ENSGT01090000260044.A.a.b.a.a.b	ENSGT01090000260044.A.a.b.a.a.a.a.a.a.b	ENSGT00390000006224 #30
Yarkand deer	MODERN SPECIES	12	GUCA2B (ENSCHYG00000026652)	GUCA2A (ENSCHYG00000026642)	FOXJ3 (ENSCHYG00000026583)	RIMKLA (ENSCHYG00000026570)	ZMYND12 (ENSCHYG00000026553)	ENSCHYG00000026542	ENSCHYG00000026536	ENSCHYG00000026530	ENSCHYG00000026495	ENSCHYG00000026477	ENSCHYG00000026472	ENSCHYG00000026459	ENSCHYG00000026406	CLDN19 (ENSCHYG00000026379)	P3H1 (ENSCHYG00000026274)	C1orf50 (ENSCHYG00000026253) #22	ENSCHYG00000026241 #23	ENSCHYG00000026229 #24	ZNF691 (ENSCHYG00000026220) #27	SLC2A1 (ENSCHYG00000026195) #29	ENSCHYG00000026156	ENSCHYG00000026141	ENSCHYG00000026119	ENSCHYG00000026091	ENSCHYG00000026082	ENSCHYG00000026072	CFAP144 (ENSCHYG00000026054) #30	EBNA1BP2 (ENSCHYG00000026041) #31	CFAP57 (ENSCHYG00000025802) #32	TMEM125 (ENSCHYG00000025774) #33	C1orf210 (ENSCHYG00000025765) #34
Percora_a	ANCESTRAL SPECIES	1	ENSGT00940000157218.C	ENSGT00970000194001	ENSGT00940000154436.b	ENSGT00940000154436.a	ENSGT00940000160362	ENSGT00390000014577.b	ENSGT00390000004248	ENSGT00950000182834.C	ENSGT00390000007816	ENSGT00940000154721.yb	ENSGT00700000105447	ENSGT00940000154721.xb.a	ENSGT00940000153341.b.p.a.a	ENSGT00940000158624	ENSGT00940000158725	ENSGT00390000003084 #22	ENSGT00940000154169.B #23	ENSGT00390000006113 #24	ENSGT00940000160531 #26	ENSGT00940000161958 #27	ENSGT00940000156792 #29	ENSGT00940000160928	ENSGT01090000260044.A.a.b.a.b.e.b	ENSGT01090000260044.A.a.b.a.b.f.a	ENSGT01090000260044.A.a.b.a.a.a.a.a.a.a	ENSGT01090000260044.A.a.b.a.a.a.a.b	ENSGT01090000260044.A.a.b.a.a.a.a.a.b	ENSGT01090000260044.A.a.b.a.a.a.b	ENSGT01090000260044.A.a.b.a.a.b	ENSGT01090000260044.A.a.b.a.a.a.a.a.a.b	ENSGT00390000006224 #30
Siberian musk deer	MODERN SPECIES	341	FOXO6 (ENSMMSG00000004411)	EDN2 (ENSMMSG00000004392)	HIVEP3 (ENSMMSG00000004366)	ENSMMSG00000004347	GUCA2B (ENSMMSG00000004328)	GUCA2A (ENSMMSG00000012152)	FOXJ3 (ENSMMSG00000012062)	ENSMMSG00000012015	ZMYND12 (ENSMMSG00000011979)	PPCS (ENSMMSG00000011950)	CCDC30 (ENSMMSG00000011727)	ENSMMSG00000011645	ENSMMSG00000011587	CLDN19 (ENSMMSG00000011553)	P3H1 (ENSMMSG00000011524)	C1orf50 (ENSMMSG00000011500) #22	TMEM269 (ENSMMSG00000011462)	SVBP (ENSMMSG00000011448) #24	ZNF691 (ENSMMSG00000011438) #27	SLC2A1 (ENSMMSG00000011409) #29	ENSMMSG00000011317	ENSMMSG00000011289	ENSMMSG00000011280	ENSMMSG00000011250	ENSMMSG00000011215	ENSMMSG00000011203	ENSMMSG00000011188	ENSMMSG00000011179	ENSMMSG00000011165	CFAP144 (ENSMMSG00000011143) #30	EBNA1BP2 (ENSMMSG00000011120) #31
Bovidae	ANCESTRAL SPECIES	1	ENSGT00970000194001	ENSGT00940000154436.b	ENSGT00940000154436.a	ENSGT00940000160362	ENSGT00390000014577.b	ENSGT00390000004248	ENSGT00950000182834.C	ENSGT00390000007816	ENSGT00940000154721.yb	ENSGT00700000105447	ENSGT00940000154721.xb.a	ENSGT00940000153341.b.p.a.b.b	ENSGT00940000153341.b.p.a.a	ENSGT00940000158624	ENSGT00940000158725	ENSGT00390000003084 #22	ENSGT00940000154169.B #23	ENSGT00390000006113 #24	ENSGT00940000160531 #26	ENSGT00940000161958 #27	ENSGT00940000156792 #29	ENSGT00940000160928	ENSGT01090000260044.A.a.b.a.b.f.b	ENSGT01090000260044.A.a.b.a.b.e.b	ENSGT01090000260044.A.a.b.a.b.f.a	ENSGT01090000260044.A.a.b.a.a.a.a.a.a.a	ENSGT01090000260044.A.a.b.a.a.a.a.b	ENSGT01090000260044.A.a.b.a.a.a.a.a.b	ENSGT01090000260044.A.a.b.a.a.a.b	ENSGT01090000260044.A.a.b.a.a.b	ENSGT01090000260044.A.a.b.a.a.a.a.a.a.b
Bovinae	ANCESTRAL SPECIES	1	ENSGT00940000154436.a	ENSGT00940000160362	ENSGT00390000014577.b	ENSGT00390000004248	ENSGT00950000182834.C	ENSGT00390000000654	ENSGT00940000167024	ENSGT00940000153342.b.i.a.b	ENSGT00390000007816	ENSGT00940000154721.yb	ENSGT00700000105447	ENSGT00940000154721.xb.a	ENSGT00940000153341.b.p.a.a	ENSGT00940000158624	ENSGT00940000158725	ENSGT00390000003084 #22	ENSGT00940000154169.B #23	ENSGT00390000006113 #24	ENSGT00940000160531 #26	ENSGT00940000161958 #27	ENSGT00940000156792 #29	ENSGT00940000160928	ENSGT01090000260044.A.a.b.a.b.f.b	ENSGT01090000260044.A.a.b.a.a.a.a.a.a.a	ENSGT01090000260044.A.a.b.a.a.a.a.b	ENSGT01090000260044.A.a.b.a.a.a.a.a.b	ENSGT01090000260044.A.a.b.a.b.f.a	ENSGT01090000260044.A.a.b.a.a.a.b	ENSGT01090000260044.A.a.b.a.a.b	ENSGT01090000260044.A.a.b.a.a.a.a.a.a.b	ENSGT00390000006224 #30
Bos	ANCESTRAL SPECIES		ENSGT00940000154436.a	ENSGT00940000160362	ENSGT00390000014577.b	ENSGT00390000004248	ENSGT00950000182834.C	ENSGT00390000000654	ENSGT00940000167024	ENSGT00940000153342.b.i.a.b	ENSGT00390000007816	ENSGT00940000154721.yb	ENSGT00700000105447	ENSGT00940000154721.xb.a	ENSGT00940000153341.b.p.a.a	ENSGT00940000158624	ENSGT00940000158725	ENSGT00390000003084 #22	ENSGT00940000154169.B #23	ENSGT00390000006113 #24	ENSGT00940000160531.l #26	ENSGT00940000161958 #27	ENSGT00940000156792 #29	ENSGT00940000160928	ENSGT01090000260044.A.a.b.a.b.f.b	ENSGT01090000260044.A.a.b.a.b.f.a	ENSGT01090000260044.A.a.b.a.a.a.a.a.a.a	ENSGT01090000260044.A.a.b.a.a.a.a.b	ENSGT01090000260044.A.a.b.a.a.a.a.a.b	ENSGT01090000260044.A.a.b.a.a.b.a	ENSGT01090000260044.A.a.b.a.a.b.b	ENSGT01090000260044.A.a.b.a.a.a.b	ENSGT01100000263497.E.b.f.b.a
Bos_a	ANCESTRAL SPECIES	1	ENSGT00970000194001	ENSGT00940000154436.b	ENSGT00940000154436.a	ENSGT00940000160362	ENSGT00390000014577.b	ENSGT00390000004248	ENSGT00950000182834.C	ENSGT00390000000654	ENSGT00940000167024	ENSGT00940000153342.b.i.a.b	ENSGT00390000007816	ENSGT00940000154721.xb.a	ENSGT00940000153341.b.p.a.a	ENSGT00940000158624	ENSGT00940000158725	ENSGT00390000003084 #22	ENSGT00940000154169.B #23	ENSGT00390000006113 #24	ENSGT00940000160531.l #26	ENSGT00940000161958 #27	ENSGT00940000156792 #29	ENSGT00940000160928	ENSGT01090000260044.A.a.b.a.b.f.b	ENSGT01090000260044.A.a.b.a.b.f.a	ENSGT01090000260044.A.a.b.a.a.a.a.a.a.a	ENSGT01090000260044.A.a.b.a.a.a.a.b	ENSGT01090000260044.A.a.b.a.a.a.a.a.b	ENSGT01090000260044.A.a.b.a.a.b.a	ENSGT01090000260044.A.a.b.a.a.a.b	ENSGT01090000260044.A.a.b.a.a.b.b	ENSGT01090000260044.A.a.b.a.a.a.a.a.a.b
Domestic yak	MODERN SPECIES	22	ENSBGRG00000014045	ENSBGRG00000014026	ENSBGRG00000013948	GUCA2A (ENSBGRG00000013890)	FOXJ3 (ENSBGRG00000013409)	RIMKLA (ENSBGRG00000013342)	ZMYND12 (ENSBGRG00000013236)	PPCS (ENSBGRG00000013144)	ENSBGRG00000013002	ENSBGRG00000012949	ENSBGRG00000012821	ENSBGRG00000012681	ENSBGRG00000012514	CLDN19 (ENSBGRG00000012480)	P3H1 (ENSBGRG00000012203)	C1orf50 (ENSBGRG00000012101) #22	ENSBGRG00000012038 #23	SVBP (ENSBGRG00000011987) #24	ENSBGRG00000011933 #26	ZNF691 (ENSBGRG00000011897) #27	SLC2A1 (ENSBGRG00000011665) #29	ENSBGRG00000011573	ENSBGRG00000011491	ENSBGRG00000011456	ENSBGRG00000011449	ENSBGRG00000011420	ENSBGRG00000011360	ENSBGRG00000011337	ENSBGRG00000011307	ENSBGRG00000011267	CFAP144 (ENSBGRG00000011192) #30
Wild yak	MODERN SPECIES	1280												ENSBMUG00000007203	ENSBMUG00000007078	CLDN19 (ENSBMUG00000007045)	P3H1 (ENSBMUG00000007025)	C1orf50 (ENSBMUG00000007012) #22	ENSBMUG00000007003 #23	SVBP (ENSBMUG00000006993) #24	ZNF691 (ENSBMUG00000006983) #27	SLC2A1 (ENSBMUG00000006972) #29
Bos_b	ANCESTRAL SPECIES	1	ENSGT00940000154436.b	ENSGT00940000154436.a	ENSGT00940000160362	ENSGT00390000014577.b	ENSGT00390000004248	ENSGT00950000182834.C	ENSGT00940000167024	ENSGT00940000153342.b.i.a.b	ENSGT00390000007816	ENSGT00940000154721.yb	ENSGT00700000105447	ENSGT00940000154721.xb.a	ENSGT00940000153341.b.p.a.b.b	ENSGT00940000158624	ENSGT00940000158725	ENSGT00390000003084 #22	ENSGT00940000154169.B #23	ENSGT00390000006113 #24	ENSGT00940000160531.l #26	ENSGT00940000161958 #27	ENSGT00940000156792 #29	ENSGT00940000160928	ENSGT01090000260044.A.a.b.a.b.f.b	ENSGT01090000260044.A.a.b.a.b.f.a	ENSGT01090000260044.A.a.b.a.a.a.a.a.a.a	ENSGT01090000260044.A.a.b.a.a.a.a.b	ENSGT01090000260044.A.a.b.a.a.a.a.a.b	ENSGT01090000260044.A.a.b.a.a.a.b	ENSGT01090000260044.A.a.b.a.a.b.a	ENSGT01100000263497.E.b.f.b.a	ENSGT01090000260044.A.a.b.a.a.a.a.a.a.b
Cow	MODERN SPECIES	22	EDN2 (ENSBTAG00000021434)	HIVEP3 (ENSBTAG00000020745)	GUCA2B (ENSBTAG00000007194)	GUCA2A (ENSBTAG00000007195)	FOXJ3 (ENSBTAG00000015887)	RIMKLA (ENSBTAG00000017502)	ZMYND12 (ENSBTAG00000012979)	PPCS (ENSBTAG00000012982)	ENSBTAG00000052771	CCDC30 (ENSBTAG00000004585)	ENSBTAG00000050906	PPIH (ENSBTAG00000004590)	YBX1 (ENSBTAG00000017368)	CLDN19 (ENSBTAG00000017381)	P3H1 (ENSBTAG00000017382)	C3H1orf50 (ENSBTAG00000017386) #22	SVBP (ENSBTAG00000017388) #24	TMEM269 (ENSBTAG00000017387) #26	ZNF691 (ENSBTAG00000016028) #27	SLC2A1 (ENSBTAG00000009617) #29	ENSBTAG00000012414	OR13P16B (ENSBTAG00000048721)	OR13P8 (ENSBTAG00000037770)	OR10AK7 (ENSBTAG00000037810)	OR13P4 (ENSBTAG00000001397)	OR13P11 (ENSBTAG00000053196)	OR13P2 (ENSBTAG00000048444)	ENSBTAG00000051805	FAM183A (ENSBTAG00000037555) #30	EBNA1BP2 (ENSBTAG00000021544) #31	CFAP57 (ENSBTAG00000021547) #32
Hybrid Bos Indicus	MODERN SPECIES	22	ENSBIXG00005029448	GUCA2B (ENSBIXG00005029429)	ENSBIXG00005029424	FOXJ3 (ENSBIXG00005029367)	RIMKLA (ENSBIXG00005029322)	ZMYND12 (ENSBIXG00005029316)	PPCS (ENSBIXG00005029303)	ENSBIXG00005029286	ENSBIXG00005007856	ENSBIXG00005007865	ENSBIXG00005007879	ENSBIXG00005007897	YBX1 (ENSBIXG00005007911)	CLDN19 (ENSBIXG00005007924)	P3H1 (ENSBIXG00005007944)	C1orf50 (ENSBIXG00005007953) #22	ENSBIXG00005000043 #23	ENSBIXG00005000066	ENSBIXG00005008000 #26	ZNF691 (ENSBIXG00005008018) #27	SLC2A1 (ENSBIXG00005008046) #29	ENSBIXG00005000102	ENSBIXG00005008058	ENSBIXG00005008067	ENSBIXG00005008087	ENSBIXG00005008104	ENSBIXG00005008124	ENSBIXG00005008138	ENSBIXG00005008149	ENSBIXG00005008162	ENSBIXG00005000129
American bison	MODERN SPECIES	3342	HIVEP3 (ENSBBBG00000001537)	ENSBBBG00000009514	GUCA2B (ENSBBBG00000009516)	GUCA2A (ENSBBBG00000009517)	FOXJ3 (ENSBBBG00000009523)	RIMKLA (ENSBBBG00000001542)	ZMYND12 (ENSBBBG00000009529)	PPCS (ENSBBBG00000009532)	ENSBBBG00000007694	ENSBBBG00000001545	ENSBBBG00000009540	ENSBBBG00000009548	ENSBBBG00000009552	CLDN19 (ENSBBBG00000009558)	P3H1 (ENSBBBG00000009562)	C1orf50 (ENSBBBG00000009566) #22	TMEM269 (ENSBBBG00000009568)	SVBP (ENSBBBG00000001549) #24	ZNF691 (ENSBBBG00000009575) #27	SLC2A1 (ENSBBBG00000009579) #29	ENSBBBG00000009582	ENSBBBG00000009587	ENSBBBG00000009590	ENSBBBG00000009592	ENSBBBG00000001552	ENSBBBG00000009600	ENSBBBG00000009601	ENSBBBG00000009604	ENSBBBG00000009607	CFAP144 (ENSBBBG00000009608) #30	EBNA1BP2 (ENSBBBG00000009613) #31
Caprinae	ANCESTRAL SPECIES	2	ENSGT00940000157999.b	ENSGT00940000161401	ENSGT00950000183053.A	ENSGT00940000157218.C	ENSGT00940000154436.b	ENSGT00940000154436.a	ENSGT00940000160362	ENSGT00390000014577.b	ENSGT00390000004248	ENSGT00950000182834.C	ENSGT00390000007816	ENSGT00940000154721.xb.a	ENSGT00940000153341.b.p.a.b.b.f	ENSGT00940000158624	ENSGT00940000158725	ENSGT00390000003084 #22	ENSGT00940000154169.B #23	ENSGT00390000006113 #24	ENSGT00940000160531 #26	ENSGT00940000161958 #27	ENSGT00940000156792 #29	ENSGT00940000160928	ENSGT01090000260044.A.a.b.a.b.e.b	ENSGT01090000260044.A.a.b.a.b.f.a	ENSGT01090000260044.A.a.b.a.a.a.a.a.a.a	ENSGT01090000260044.A.a.b.a.a.a.a.b	ENSGT01090000260044.A.a.b.a.a.a.a.a.b	ENSGT01090000260044.A.a.b.a.a.a.b	ENSGT01090000260044.A.a.b.a.a.a.a.a.a.b	ENSGT00390000006224 #30	ENSGT00390000014984 #31
Goat	MODERN SPECIES	22	FOXO6 (ENSCHIG00000018218)	EDN2 (ENSCHIG00000024063)	HIVEP3 (ENSCHIG00000011517)	ENSCHIG00000012856	GUCA2B (ENSCHIG00000019738)	GUCA2A (ENSCHIG00000005275)	FOXJ3 (ENSCHIG00000021942)	RIMKLA (ENSCHIG00000015404)	ZMYND12 (ENSCHIG00000007728)	PPCS (ENSCHIG00000022863)	CCDC30 (ENSCHIG00000018207)	ENSCHIG00000007905	ENSCHIG00000014169	CLDN19 (ENSCHIG00000017870)	P3H1 (ENSCHIG00000008788)	C1orf50 (ENSCHIG00000015103) #22	ENSCHIG00000017910 #23	SVBP (ENSCHIG00000008164) #24	ENSCHIG00000013284	ERMAP (ENSCHIG00000013586) #26	ZNF691 (ENSCHIG00000012591) #27	ENSCHIG00000000575	SLC2A1 (ENSCHIG00000015523) #29	ENSCHIG00000020869	ENSCHIG00000023252	ENSCHIG00000012428	ENSCHIG00000008088	ENSCHIG00000023263	ENSCHIG00000017587	ENSCHIG00000018185	ENSCHIG00000008479
Rambouillet Sheep	DUPLICATION
Rambouillet Sheep	MODERN SPECIES		CTPS1 (ENSOARG00020000058)	SLFNL1 (ENSOARG00020000061)	SCMH1 (ENSOARG00020000067)	EDN2 (ENSOARG00020000081)	HIVEP3 (ENSOARG00020000082)	GUCA2B (ENSOARG00020000089)	GUCA2A (ENSOARG00020000095)	FOXJ3 (ENSOARG00020000103)	RIMKLA (ENSOARG00020000124)	ZMYND12 (ENSOARG00020000132)	PPCS (ENSOARG00020000145)	PPIH (ENSOARG00020000274)	ENSOARG00020000296	CLDN19 (ENSOARG00020000325)	P3H1 (ENSOARG00020000368)	ENSOARG00020000393 #22	TMEM269 (ENSOARG00020000403)	SVBP (ENSOARG00020000415) #24	ZNF691 (ENSOARG00020000426) #27	SLC2A1 (ENSOARG00020000445) #29	ENSOARG00020000505	ENSOARG00020000545	ENSOARG00020000553	ENSOARG00020000560	ENSOARG00020000608	ENSOARG00020000619	ENSOARG00020000631	ENSOARG00020000636	CFAP144 (ENSOARG00020000642) #30	EBNA1BP2 (ENSOARG00020000671) #31	CFAP57 (ENSOARG00020000692) #32
Rambouillet Sheep	MODERN SPECIES		ZSWIM5 (ENSOARG00020003848)	ENSOARG00020000037	HPDL (ENSOARG00020000043)	MUTYH (ENSOARG00020000051)	TOE1 (ENSOARG00020000052)	TESK2 (ENSOARG00020000085)	ENSOARG00020000128	MMACHC (ENSOARG00020000138)	PRDX1 (ENSOARG00020000156)	AKR1A1 (ENSOARG00020000189)	ENSOARG00020000265	CCDC17 (ENSOARG00020000364)	GPBP1L1 (ENSOARG00020000433)	TMEM69 (ENSOARG00020000462)	IPP (ENSOARG00020000478)	ENSOARG00020000500 #22	MAST2 (ENSOARG00020000575)	PIK3R3 (ENSOARG00020000796)	P3R3URF (ENSOARG00020000858)	TSPAN1 (ENSOARG00020000865)	POMGNT1 (ENSOARG00020000885)	LURAP1 (ENSOARG00020000928)	RAD54L (ENSOARG00020000936)	LRRC41 (ENSOARG00020000971)	UQCRH (ENSOARG00020000996)	NSUN4 (ENSOARG00020001022)	ENSOARG00020001036	FAAH (ENSOARG00020001048)	ENSOARG00020001062	DMBX1 (ENSOARG00020001077)	TMEM275 (ENSOARG00020001085)
Laurasiatheria_b	ANCESTRAL SPECIES		ENSGT00970000194001	ENSGT00940000154436.b	ENSGT00940000154436.a	ENSGT00940000160362	ENSGT00390000014577.b	ENSGT00390000004248	ENSGT00950000182834.C	ENSGT00390000000654	ENSGT00940000167024	ENSGT00390000007816	ENSGT00700000105447	ENSGT00940000154721	ENSGT00940000153341.b.p.a.a	ENSGT00940000158624	ENSGT00940000158725	ENSGT00390000003084 #22	ENSGT00940000154169.B #23	ENSGT00390000006113 #24	ENSGT00940000160531 #26	ENSGT00940000161958 #27	ENSGT00940000156792 #29	ENSGT00940000160928	ENSGT01090000260044.A.a.b.a.b	ENSGT01090000260044.A.a.b.a.a.a.a.a.a.a	ENSGT01090000260044.A.a.b.a.a.a.a.b	ENSGT01090000260044.A.a.b.a.a.a.a.a.b	ENSGT01090000260044.A.a.b.a.a.a.b	ENSGT01090000260044.A.a.b.a.a.b	ENSGT01090000260044.A.a.b.a.a.a.a.a.a.b	ENSGT00390000006224 #30	ENSGT00390000014984 #31
Laurasiatheria_c	ANCESTRAL SPECIES		ENSGT00950000183053.A	ENSGT00940000157218.C	ENSGT00970000194001	ENSGT00940000154436.b	ENSGT00940000154436.a	ENSGT00940000160362	ENSGT00390000014577.b	ENSGT00390000004248	ENSGT00950000182834.C	ENSGT00390000000654	ENSGT00390000007816	ENSGT00940000154721	ENSGT00940000153341.b.p.a.a	ENSGT00940000158624	ENSGT00940000158725	ENSGT00390000003084 #22	ENSGT00940000154169.B #23	ENSGT00390000006113 #24	ENSGT00940000160531 #26	ENSGT00940000161958 #27	ENSGT00940000156792 #29	ENSGT00940000160928	ENSGT01090000260044.A.a.b.a.b	ENSGT01090000260044.A.a.b.a.a.a.a.a.a.a	ENSGT01090000260044.A.a.b.a.a.a.a.b	ENSGT01090000260044.A.a.b.a.a.a.a.a.b	ENSGT01090000260044.A.a.b.a.a.a.b	ENSGT01090000260044.A.a.b.a.a.b	ENSGT01090000260044.A.a.b.a.a.a.a.a.a.b	ENSGT00390000006224 #30	ENSGT00390000014984 #31
Chiroptera	ANCESTRAL SPECIES		ENSGT00940000157999	ENSGT00940000161401.f	ENSGT00950000183053.A	ENSGT00940000157218.C	ENSGT00940000154436.b	ENSGT00940000154436.a	ENSGT00940000160362	ENSGT00390000014577.b	ENSGT00390000004248	ENSGT00950000182834.C	ENSGT00390000007816	ENSGT00940000154721	ENSGT00940000153341.b.p.a.a	ENSGT00940000158624	ENSGT00940000158725	ENSGT00390000003084 #22	ENSGT00940000154169.B #23	ENSGT00390000006113 #24	ENSGT00940000160531 #26	ENSGT00940000161958 #27	ENSGT00940000156792 #29	ENSGT00940000160928	ENSGT01090000260044.A.a.b.a.a.a.a.a.b	ENSGT01090000260044.A.a.b.a.a.a.b	ENSGT00390000006224 #30	ENSGT00390000014984 #31	ENSGT00620000088018.h #32	ENSGT00390000003015 #33	ENSGT00510000048988 #34	ENSGT00940000157693 #35	ENSGT00940000161225 #36
Microchiroptera	ANCESTRAL SPECIES	1	ENSGT00940000157999	ENSGT00940000161401.f	ENSGT00950000183053.A	ENSGT00940000157218.C	ENSGT00940000154436.b	ENSGT00940000154436.a	ENSGT00940000160362	ENSGT00390000014577.b	ENSGT00390000004248	ENSGT00950000182834.C	ENSGT00390000007816	ENSGT00940000154721	ENSGT00940000153341.b.p.a.a	ENSGT00940000158624	ENSGT00940000158725	ENSGT00390000003084 #22	ENSGT00940000154169.B #23	ENSGT00390000006113 #24	ENSGT00940000160531 #26	ENSGT00940000161958 #27	ENSGT00940000156792 #29	ENSGT01090000260044.A.a.b.a.b	ENSGT01090000260044.A.a.b.a.a.a.a.a.a.a	ENSGT00390000014984 #31	ENSGT00620000088018.h #32	ENSGT00390000003015 #33	ENSGT00510000048988 #34	ENSGT00940000157693 #35	ENSGT00940000161225 #36	ENSGT00950000183104.A.a.a #37	ENSGT01050000244838.H.d
Microbat	MODERN SPECIES	974	SLFNL1 (ENSMLUG00000007340)	SCMH1 (ENSMLUG00000007367)	EDN2 (ENSMLUG00000004668)	HIVEP3 (ENSMLUG00000004675)	GUCA2B (ENSMLUG00000005765)	GUCA2A (ENSMLUG00000009372)	FOXJ3 (ENSMLUG00000005770)	RIMKLA (ENSMLUG00000005776)	ZMYND12 (ENSMLUG00000017037)	PPCS (ENSMLUG00000017041)	CCDC30 (ENSMLUG00000017045)	PPIH (ENSMLUG00000025400)	ENSMLUG00000013593	CLDN19 (ENSMLUG00000013599)	P3H1 (ENSMLUG00000013602)	C1orf50 (ENSMLUG00000013623) #22	ENSMLUG00000013627 #23	SVBP (ENSMLUG00000022556) #24	ERMAP (ENSMLUG00000013632) #26	ZNF691 (ENSMLUG00000013638) #27	SLC2A1 (ENSMLUG00000013639) #29	ENSMLUG00000023571	ENSMLUG00000028678	ENSMLUG00000023693	ENSMLUG00000028816	CFAP144 (ENSMLUG00000027307) #30	ENSMLUG00000011409 #31	CFAP57 (ENSMLUG00000000590) #32	TMEM125 (ENSMLUG00000012571) #33	ENSMLUG00000012574 #34	TIE1 (ENSMLUG00000012578) #35
Greater horseshoe bat	MODERN SPECIES	27	FOXO6 (ENSRFEG00010005506)	EDN2 (ENSRFEG00010005516)	HIVEP3 (ENSRFEG00010005539)	GUCA2B (ENSRFEG00010005559)	GUCA2A (ENSRFEG00010005573)	FOXJ3 (ENSRFEG00010005612)	RIMKLA (ENSRFEG00010005649)	ZMYND12 (ENSRFEG00010005667)	ENSRFEG00010005684	PPCS (ENSRFEG00010005708)	CCDC30 (ENSRFEG00010005784)	ENSRFEG00010005908	YBX1 (ENSRFEG00010005947)	CLDN19 (ENSRFEG00010005994)	P3H1 (ENSRFEG00010006047)	C1orf50 (ENSRFEG00010006093) #22	TMEM269 (ENSRFEG00010006121)	SVBP (ENSRFEG00010006152) #24	ERMAP (ENSRFEG00010006239) #26	ZNF691 (ENSRFEG00010006345) #27	SLC2A1 (ENSRFEG00010006370) #29	ENSRFEG00010006411	ENSRFEG00010006438	EBNA1BP2 (ENSRFEG00010006468) #31	CFAP144 (ENSRFEG00010006510) #30	CFAP57 (ENSRFEG00010006543) #32	TMEM125 (ENSRFEG00010006646) #33	ENSRFEG00010006662 #34	TIE1 (ENSRFEG00010006700) #35	MPL (ENSRFEG00010006779) #36	CDC20 (ENSRFEG00010006865) #37
Megabat	MODERN SPECIES	6441														CLDN19 (ENSPVAG00000017483)	P3H1 (ENSPVAG00000017479)	C1orf50 (ENSPVAG00000017478) #22	SVBP (ENSPVAG00000017477) #24	ERMAP (ENSPVAG00000017476) #26	ZNF691 (ENSPVAG00000017475) #27	SLC2A1 (ENSPVAG00000017474) #29
Equus	ANCESTRAL SPECIES	2	ENSGT00950000183053.A	ENSGT00940000157218.C	ENSGT00970000194001	ENSGT00940000154436.b	ENSGT00940000154436.a	ENSGT00940000160362	ENSGT00390000014577.b	ENSGT00390000004248	ENSGT00950000182834.C	ENSGT00390000000654	ENSGT00390000007816	ENSGT00940000154721	ENSGT00940000153341.b.p.a.a.ab	ENSGT00940000158624	ENSGT00940000158725	ENSGT00390000003084 #22	ENSGT00940000154169.B #23	ENSGT00390000006113 #24	ENSGT00940000160531 #26	ENSGT00940000161958 #27	ENSGT00940000156792 #29	ENSGT00940000160928	ENSGT01090000260044.A.a.b.a.b	ENSGT01090000260044.A.a.b.a.a.a.a.a.a.a	ENSGT01090000260044.A.a.b.a.a.a.a.b	ENSGT01090000260044.A.a.b.a.a.a.a.a.b	ENSGT01090000260044.A.a.b.a.a.a.b	ENSGT01090000260044.A.a.b.a.a.b	ENSGT01090000260044.A.a.b.a.a.a.a.a.a.b	ENSGT00390000006224 #30	ENSGT00390000014984 #31
Donkey	MODERN SPECIES	25	EDN2 (ENSEASG00005036084)	HIVEP3 (ENSEASG00005001186)	ENSEASG00005036254	GUCA2B (ENSEASG00005001201)	ENSEASG00005023801	FOXJ3 (ENSEASG00005001210)	RIMKLA (ENSEASG00005001217)	ZMYND12 (ENSEASG00005001220)	PPCS (ENSEASG00005001227)	ENSEASG00005038387	CCDC30 (ENSEASG00005001246)	PPIH (ENSEASG00005001269)	ENSEASG00005001276	CLDN19 (ENSEASG00005001286)	P3H1 (ENSEASG00005001292)	ENSEASG00005029261 #22	ENSEASG00005001305 #23	SVBP (ENSEASG00005036382) #24	ERMAP (ENSEASG00005001324) #26	ZNF691 (ENSEASG00005001340) #27	SLC2A1 (ENSEASG00005001348) #29	ENSEASG00005025591	ENSEASG00005001366	ENSEASG00005001374	ENSEASG00005001380	ENSEASG00005001382	ENSEASG00005001384	ENSEASG00005035787	ENSEASG00005001386	ENSEASG00005027264	ENSEASG00005001388
Horse	MODERN SPECIES	11	FOXO6 (ENSECAG00000002551)	ENSECAG00000058410	EDN2 (ENSECAG00000023173)	HIVEP3 (ENSECAG00000018490)	GUCA2B (ENSECAG00000018081)	GUCA2A (ENSECAG00000015312)	FOXJ3 (ENSECAG00000008665)	RIMKLA (ENSECAG00000005880)	PPCS (ENSECAG00000017987)	ZMYND12 (ENSECAG00000019887)	CCDC30 (ENSECAG00000010908)	PPIH (ENSECAG00000009890)	YBX1 (ENSECAG00000023592)	CLDN19 (ENSECAG00000021395)	P3H1 (ENSECAG00000022675)	C2H1orf50 (ENSECAG00000054421) #22	TMEM269 (ENSECAG00000020080) #23	SVBP (ENSECAG00000019655) #24	ERMAP (ENSECAG00000013102) #26	ENSECAG00000053183	ZNF691 (ENSECAG00000013086) #27	SLC2A1 (ENSECAG00000000303) #29	ENSECAG00000014951	ENSECAG00000036863	ENSECAG00000060111	CFAP144 (ENSECAG00000010988) #30	EBNA1BP2 (ENSECAG00000024179) #31	ENSECAG00000051385	CFAP57 (ENSECAG00000022802) #32	ENSECAG00000050555	TMEM125 (ENSECAG00000001068) #33
Carnivora	ANCESTRAL SPECIES	1	ENSGT00940000157218.C	ENSGT00940000154436.b	ENSGT00940000154436.a	ENSGT00940000160362	ENSGT00390000014577.b	ENSGT00390000004248	ENSGT00950000182834.C	ENSGT00390000000654	ENSGT00940000167024	ENSGT00390000007816	ENSGT00700000105447	ENSGT00940000154721	ENSGT00940000153341.b.p.a.a	ENSGT00940000158624	ENSGT00940000158725	ENSGT00390000003084 #22	ENSGT00940000154169.B #23	ENSGT00390000006113 #24	ENSGT00940000160531 #26	ENSGT00940000161958 #27	ENSGT00940000156792 #29	ENSGT00940000160928	ENSGT01090000260044.A.a.b.a.b	ENSGT01090000260044.A.a.b.a.a.a.a.a.a.a	ENSGT01090000260044.A.a.b.a.a.a.a.b	ENSGT01090000260044.A.a.b.a.a.a.a.a.b	ENSGT01090000260044.A.a.b.a.a.a.b	ENSGT01090000260044.A.a.b.a.a.b	ENSGT01090000260044.A.a.b.a.a.a.a.a.a.b	ENSGT00390000006224 #30	ENSGT00390000014984 #31
Felidae	ANCESTRAL SPECIES	10	ENSGT00940000161401	ENSGT00950000183053.A	ENSGT00940000157218.C	ENSGT00940000154436.b	ENSGT00940000154436.a	ENSGT00940000160362	ENSGT00390000014577.b	ENSGT00390000004248	ENSGT00950000182834.C	ENSGT00390000007816	ENSGT00700000105447	ENSGT00940000154721	ENSGT00940000153341.b.p.a.a	ENSGT00940000158624	ENSGT00940000158725	ENSGT00390000003084 #22	ENSGT00940000154169.B #23	ENSGT00390000006113.s #24	ENSGT00940000160531 #26	ENSGT00940000161958 #27	ENSGT00940000156792 #29	ENSGT00940000160928	ENSGT01090000260044.A.a.b.a.b	ENSGT01090000260044.A.a.b.a.a.a.a.a.a.a	ENSGT01090000260044.A.a.b.a.a.a.a.a.b	ENSGT01090000260044.A.a.b.a.a.a.b	ENSGT01090000260044.A.a.b.a.a.b	ENSGT01090000260044.A.a.b.a.a.a.a.a.a.b	ENSGT00390000006224 #30	ENSGT00390000014984 #31	ENSGT00620000088018.h #32
Panthera	ANCESTRAL SPECIES	4	ENSGT00950000183053.A	ENSGT00940000157218.C	ENSGT00940000154436.b	ENSGT00940000154436.a	ENSGT00940000160362	ENSGT00390000014577.b	ENSGT00390000004248	ENSGT00950000182834.C	ENSGT00390000007816	ENSGT00700000105447.c	ENSGT00940000154721	ENSGT00940000153341.b.p.a.b.b	ENSGT00940000153341.b.p.a.a	ENSGT00940000158624	ENSGT00940000158725	ENSGT00390000003084 #22	ENSGT00940000154169.B #23	ENSGT00390000006113.s #24	ENSGT00940000160531 #26	ENSGT00940000161958 #27	ENSGT00940000156792 #29	ENSGT00940000160928	ENSGT01090000260044.A.a.b.a.b	ENSGT01090000260044.A.a.b.a.a.a.a.a.a.a	ENSGT01090000260044.A.a.b.a.a.a.a.a.b	ENSGT01090000260044.A.a.b.a.a.a.b	ENSGT01090000260044.A.a.b.a.a.b	ENSGT01090000260044.A.a.b.a.a.a.a.a.a.b	ENSGT00390000006224 #30	ENSGT00390000014984 #31	ENSGT00620000088018.h #32
Tiger	MODERN SPECIES	100	SCMH1 (ENSPTIG00000014755)	EDN2 (ENSPTIG00000014556)	HIVEP3 (ENSPTIG00000014261)	GUCA2B (ENSPTIG00000013678)	GUCA2A (ENSPTIG00000013553)	FOXJ3 (ENSPTIG00000013449)	RIMKLA (ENSPTIG00000013319)	ZMYND12 (ENSPTIG00000013136)	ENSPTIG00000012890	CCDC30 (ENSPTIG00000012162)	ENSPTIG00000011889	ENSPTIG00000011731	ENSPTIG00000011422	CLDN19 (ENSPTIG00000011238)	P3H1 (ENSPTIG00000010953)	C1orf50 (ENSPTIG00000010748) #22	ENSPTIG00000010413 #23	ENSPTIG00000010290 #24	ERMAP (ENSPTIG00000009979) #26	ZNF691 (ENSPTIG00000009842) #27	SLC2A1 (ENSPTIG00000009543) #29	ENSPTIG00000008959	ENSPTIG00000006268	ENSPTIG00000006261	ENSPTIG00000008150	ENSPTIG00000006260	CFAP144 (ENSPTIG00000007244) #30	EBNA1BP2 (ENSPTIG00000006570) #31	CFAP57 (ENSPTIG00000005008) #32	C1orf210 (ENSPTIG00000003811) #34	ENSPTIG00000002753
Panthera_a	ANCESTRAL SPECIES	11	ENSGT00940000161401	ENSGT00950000183053.A	ENSGT00940000157218.C	ENSGT00940000154436.b	ENSGT00940000154436.a	ENSGT00940000160362	ENSGT00390000014577.b	ENSGT00390000004248	ENSGT00950000182834.C	ENSGT00390000007816	ENSGT00700000105447.c	ENSGT00940000154721	ENSGT00940000153341.b.p.a.b.b	ENSGT00940000158624	ENSGT00940000158725	ENSGT00390000003084 #22	ENSGT01050000245090	ENSGT00390000006113.s #24	ENSGT00940000160531 #26	ENSGT00940000161958 #27	ENSGT00940000156792 #29	ENSGT00940000160928	ENSGT01090000260044.A.a.b.a.b	ENSGT01090000260044.A.a.b.a.a.a.a.a.a.a	ENSGT01090000260044.A.a.b.a.a.a.a.a.b	ENSGT01090000260044.A.a.b.a.a.a.b	ENSGT01090000260044.A.a.b.a.a.b	ENSGT01090000260044.A.a.b.a.a.a.a.a.a.b	ENSGT00390000006224 #30	ENSGT00390000014984 #31	ENSGT00620000088018.h #32
leopard	DUPLICATION
leopard	MODERN SPECIES	122	FOXO6 (ENSPPRG00000004188)	EDN2 (ENSPPRG00000003973)	HIVEP3 (ENSPPRG00000003849)	GUCA2B (ENSPPRG00000003097)	GUCA2A (ENSPPRG00000002704)	FOXJ3 (ENSPPRG00000002362)	RIMKLA (ENSPPRG00000023129)	ZMYND12 (ENSPPRG00000023490)	PPCS (ENSPPRG00000023531)	CCDC30 (ENSPPRG00000023928)	ENSPPRG00000016664	ENSPPRG00000015957	YBX1 (ENSPPRG00000014539)	CLDN19 (ENSPPRG00000012935)	P3H1 (ENSPPRG00000012621)	ENSPPRG00000011250 #22	TMEM269 (ENSPPRG00000010652)	ENSPPRG00000010025 #24	ERMAP (ENSPPRG00000009921) #26	ZNF691 (ENSPPRG00000009201) #27	SLC2A1 (ENSPPRG00000008282) #29	ENSPPRG00000007909	ENSPPRG00000007360	ENSPPRG00000018433	ENSPPRG00000006895	ENSPPRG00000018339	ENSPPRG00000018333	CFAP144 (ENSPPRG00000005822) #30	EBNA1BP2 (ENSPPRG00000005080) #31	CFAP57 (ENSPPRG00000004273) #32	TMEM125 (ENSPPRG00000018226) #33
leopard	MODERN SPECIES	7	CHP1 (ENSPPRG00000011159)	OIP5 (ENSPPRG00000011176)	NUSAP1 (ENSPPRG00000011514)	NDUFAF1 (ENSPPRG00000011567)	RTF1 (ENSPPRG00000011578)	ITPKA (ENSPPRG00000011595)	ENSPPRG00000011716	RPAP1 (ENSPPRG00000011864)	TYRO3 (ENSPPRG00000012013)	ENSPPRG00000012038	MGA (ENSPPRG00000012279)	MAPKBP1 (ENSPPRG00000012479)	JMJD7 (ENSPPRG00000012660)	PLA2G4B (ENSPPRG00000012746)	SPTBN5 (ENSPPRG00000012931)	ENSPPRG00000013276 #22	EHD4 (ENSPPRG00000013283)	PLA2G4E (ENSPPRG00000013329)	PLA2G4D (ENSPPRG00000013503)	PLA2G4F (ENSPPRG00000013733)	VPS39 (ENSPPRG00000013971)	TMEM87A (ENSPPRG00000014187)	GANC (ENSPPRG00000014695)	CAPN3 (ENSPPRG00000016633)	ZNF106 (ENSPPRG00000017499)	SNAP23 (ENSPPRG00000018274)	LRRC57 (ENSPPRG00000020498)	HAUS2 (ENSPPRG00000020590)	CDAN1 (ENSPPRG00000022298)	TTBK2 (ENSPPRG00000025071)	UBR1 (ENSPPRG00000025066)
lion	MODERN SPECIES	8	MACF1 (ENSPLOG00000012948)	ENSPLOG00000011799	GUCA2B (ENSPLOG00000011763)	GUCA2A (ENSPLOG00000011719)	ENSPLOG00000011700	FOXJ3 (ENSPLOG00000011586)	RIMKLA (ENSPLOG00000011527)	ZMYND12 (ENSPLOG00000011443)	PPCS (ENSPLOG00000011362)	ENSPLOG00000011309	CCDC30 (ENSPLOG00000010752)	ENSPLOG00000010560	YBX1 (ENSPLOG00000010496)	CLDN19 (ENSPLOG00000010361)	P3H1 (ENSPLOG00000010321)	C1orf50 (ENSPLOG00000010275) #22	TMEM269 (ENSPLOG00000010246)	ENSPLOG00000010220 #24	ERMAP (ENSPLOG00000010188) #26	ZNF691 (ENSPLOG00000010170) #27	SLC2A1 (ENSPLOG00000010149) #29	ENSPLOG00000010053	ENSPLOG00000010019	ENSPLOG00000009994	ENSPLOG00000009937	ENSPLOG00000009917	ENSPLOG00000009899	ENSPLOG00000009885	CFAP144 (ENSPLOG00000009861) #30	EBNA1BP2 (ENSPLOG00000009826) #31	CFAP57 (ENSPLOG00000009653) #32
Cat	MODERN SPECIES	239	FOXO6 (ENSFCAG00000042868)	EDN2 (ENSFCAG00000014032)	HIVEP3 (ENSFCAG00000014035)	ENSFCAG00000048899	GUCA2B (ENSFCAG00000006182)	GUCA2A (ENSFCAG00000006183)	FOXJ3 (ENSFCAG00000026568)	RIMKLA (ENSFCAG00000043810)	ZMYND12 (ENSFCAG00000012835)	PPCS (ENSFCAG00000024374)	CCDC30 (ENSFCAG00000011261)	PPIH (ENSFCAG00000028168)	YBX1 (ENSFCAG00000022604)	CLDN19 (ENSFCAG00000036865)	P3H1 (ENSFCAG00000012192)	CC1H1orf50 (ENSFCAG00000012195) #22	ENSFCAG00000044811 #23	SVBP (ENSFCAG00000035612) #24	ERMAP (ENSFCAG00000003484) #26	ZNF691 (ENSFCAG00000034864) #27	SLC2A1 (ENSFCAG00000006060) #29	ENSFCAG00000023472	ENSFCAG00000040395	ENSFCAG00000038707	ENSFCAG00000040935	CFAP144 (ENSFCAG00000026352) #30	EBNA1BP2 (ENSFCAG00000022345) #31	CFAP57 (ENSFCAG00000024543) #32	CC1H1orf210 (ENSFCAG00000043373) #34	TIE1 (ENSFCAG00000015111) #35	MPL (ENSFCAG00000015112) #36
Caniformia	ANCESTRAL SPECIES	2	ENSGT00950000183053.A	ENSGT00940000157218.C	ENSGT00940000154436.b	ENSGT00940000154436.a	ENSGT00940000160362	ENSGT00390000014577.b	ENSGT00390000004248	ENSGT00950000182834.C	ENSGT00390000000654	ENSGT00390000007816	ENSGT00940000167024	ENSGT00940000154721	ENSGT00940000153341.b.p.a.a	ENSGT00940000158624	ENSGT00940000158725	ENSGT00390000003084 #22	ENSGT00940000154169.B #23	ENSGT00390000006113 #24	ENSGT00940000160531 #26	ENSGT00940000161958 #27	ENSGT00940000156792 #29	ENSGT00940000160928	ENSGT01090000260044.A.a.b.a.b	ENSGT01090000260044.A.a.b.a.a.a.a.a.a.a	ENSGT01090000260044.A.a.b.a.a.a.a.b	ENSGT01090000260044.A.a.b.a.a.a.a.a.b	ENSGT01090000260044.A.a.b.a.a.a.b	ENSGT01090000260044.A.a.b.a.a.b	ENSGT01090000260044.A.a.b.a.a.a.a.a.a.b	ENSGT00390000006224 #30	ENSGT00390000014984 #31
Caniformia_b	ANCESTRAL SPECIES	1	ENSGT00950000183053.A	ENSGT00940000157218.C	ENSGT00940000154436.b	ENSGT00940000154436.a	ENSGT00940000160362	ENSGT00390000014577.b	ENSGT00390000004248	ENSGT00950000182834.C	ENSGT00390000000654	ENSGT00390000007816	ENSGT00940000167024	ENSGT00940000154721	ENSGT00940000153341.b.p.a.a	ENSGT00940000158624	ENSGT00940000158725	ENSGT00390000003084 #22	ENSGT00940000154169.B #23	ENSGT00390000006113 #24	ENSGT00940000160531 #26	ENSGT00940000161958 #27	ENSGT00940000156792 #29	ENSGT00940000160928	ENSGT01090000260044.A.a.b.a.b	ENSGT01090000260044.A.a.b.a.a.a.a.a.a.a	ENSGT01090000260044.A.a.b.a.a.a.a.b	ENSGT01090000260044.A.a.b.a.a.a.a.a.b	ENSGT01090000260044.A.a.b.a.a.a.b	ENSGT01090000260044.A.a.b.a.a.b	ENSGT01090000260044.A.a.b.a.a.a.a.a.a.b	ENSGT00390000006224 #30	ENSGT00390000014984 #31
Ursidae	ANCESTRAL SPECIES		ENSGT00940000161401	ENSGT00950000183053.A	ENSGT00940000157218.C	ENSGT00940000154436.b	ENSGT00940000154436.a	ENSGT00940000160362	ENSGT00390000014814.a.b.a.b.a.b	ENSGT00390000014577.b	ENSGT00390000004248	ENSGT00950000182834.C	ENSGT00390000007816	ENSGT00940000154721	ENSGT00940000153341.b.p.a.a	ENSGT00940000158624	ENSGT00940000158725	ENSGT00390000003084 #22	ENSGT00940000154169.B #23	ENSGT00390000006113 #24	ENSGT00940000160531 #26	ENSGT00940000161958 #27	ENSGT00940000156792.d #29	ENSGT00940000160928	ENSGT01090000260044.A.a.b.a.a.a.a.a.a.a	ENSGT01090000260044.A.a.b.a.a.a.a.b	ENSGT01090000260044.A.a.b.a.a.a.a.a.b	ENSGT01090000260044.A.a.b.a.a.a.b	ENSGT01090000260044.A.a.b.a.a.a.a.a.a.b	ENSGT00390000006224 #30	ENSGT00390000014984 #31	ENSGT00620000088018.h #32	ENSGT00390000003015 #33
Ursus	ANCESTRAL SPECIES	19	ENSGT00940000161401	ENSGT00950000183053.A	ENSGT00940000157218.C	ENSGT00940000154436.b	ENSGT00940000154436.a	ENSGT00940000160362	ENSGT00390000014814.a.b.a.b.a.b.hb	ENSGT00390000014577.b	ENSGT00390000004248	ENSGT00950000182834.C	ENSGT00390000007816	ENSGT00940000154721	ENSGT00940000153341.b.p.a.a	ENSGT00940000158624	ENSGT00940000158725	ENSGT00390000003084 #22	ENSGT01050000245090	ENSGT00390000006113 #24	ENSGT00940000160531 #26	ENSGT00940000161958 #27	ENSGT00940000156792.d #29	ENSGT00940000160928	ENSGT01090000260044.A.a.b.a.a.a.a.a.a.a	ENSGT01090000260044.A.a.b.a.a.a.a.b	ENSGT01090000260044.A.a.b.a.a.a.a.a.b	ENSGT01090000260044.A.a.b.a.a.a.b	ENSGT01090000260044.A.a.b.a.a.a.a.a.a.b	ENSGT00390000006224 #30	ENSGT00390000014984 #31	ENSGT00620000088018.h #32	ENSGT00390000003015 #33
American black bear	MODERN SPECIES	878														CLDN19 (ENSUAMG00000000493)	P3H1 (ENSUAMG00000000484)	C1orf50 (ENSUAMG00000000480) #22	ENSUAMG00000000442	SVBP (ENSUAMG00000000432) #24	ERMAP (ENSUAMG00000000354) #26	ZNF691 (ENSUAMG00000000333) #27	SLC2A1 (ENSUAMG00000000321) #29	ENSUAMG00000000246	ENSUAMG00000000195
Polar bear	MODERN SPECIES	218	SCMH1 (ENSUMAG00000000166)	ENSUMAG00000024394	HIVEP3 (ENSUMAG00000024393)	GUCA2B (ENSUMAG00000024389)	GUCA2A (ENSUMAG00000024388)	FOXJ3 (ENSUMAG00000024387)	ENSUMAG00000024386	RIMKLA (ENSUMAG00000024385)	ZMYND12 (ENSUMAG00000024384)	ENSUMAG00000024383	CCDC30 (ENSUMAG00000024382)	ENSUMAG00000024381	ENSUMAG00000024380	CLDN19 (ENSUMAG00000024378)	P3H1 (ENSUMAG00000024377)	C1orf50 (ENSUMAG00000024376) #22	TMEM269 (ENSUMAG00000024375)	SVBP (ENSUMAG00000024374) #24	ERMAP (ENSUMAG00000024372) #26	ZNF691 (ENSUMAG00000024370) #27	SLC2A1 (ENSUMAG00000024368) #29	ENSUMAG00000024366	ENSUMAG00000024365	ENSUMAG00000024364	ENSUMAG00000024363	ENSUMAG00000024362	ENSUMAG00000024361	ENSUMAG00000024360	ENSUMAG00000024359	CFAP144 (ENSUMAG00000024358) #30	EBNA1BP2 (ENSUMAG00000024357) #31
Giant Panda	MODERN SPECIES	11	FOXO6 (ENSAMEG00000028105)	EDN2 (ENSAMEG00000000522)	HIVEP3 (ENSAMEG00000029105)	GUCA2B (ENSAMEG00000026602)	GUCA2A (ENSAMEG00000000614)	FOXJ3 (ENSAMEG00000000591)	ENSAMEG00000025996	RIMKLA (ENSAMEG00000030543)	ZMYND12 (ENSAMEG00000000560)	PPCS (ENSAMEG00000000554)	CCDC30 (ENSAMEG00000000529)	PPIH (ENSAMEG00000000526)	ENSAMEG00000000494	CLDN19 (ENSAMEG00000025177)	P3H1 (ENSAMEG00000002135)	C1orf50 (ENSAMEG00000002122) #22	ENSAMEG00000002110 #23	SVBP (ENSAMEG00000028888) #24	ERMAP (ENSAMEG00000028264) #26	ZNF691 (ENSAMEG00000019766) #27	SLC2A1 (ENSAMEG00000002058) #29	ENSAMEG00000024985	ENSAMEG00000029749	ENSAMEG00000002042	ENSAMEG00000019743	ENSAMEG00000014184	ENSAMEG00000018828	ENSAMEG00000019271	CFAP144 (ENSAMEG00000001798) #30	EBNA1BP2 (ENSAMEG00000001772) #31	CFAP57 (ENSAMEG00000001757) #32
Mustelinae	ANCESTRAL SPECIES		ENSGT00950000183053.A	ENSGT00940000157218.C	ENSGT00940000154436.b	ENSGT00940000154436.a	ENSGT00940000160362	ENSGT00390000014577.b	ENSGT00390000004248	ENSGT00950000182834.C	ENSGT00390000000654	ENSGT00390000007816	ENSGT00940000167024	ENSGT00940000154721	ENSGT00940000153341.b.p.a.a	ENSGT00940000158624	ENSGT00940000158725	ENSGT00390000003084 #22	ENSGT00940000154169.B #23	ENSGT00390000006113 #24	ENSGT00940000160531 #26	ENSGT00940000161958 #27	ENSGT00940000156792 #29	ENSGT00940000160928	ENSGT01090000260044.A.a.b.a.b	ENSGT01090000260044.A.a.b.a.a.a.a.a.a.a	ENSGT01090000260044.A.a.b.a.a.a.a.b	ENSGT01090000260044.A.a.b.a.a.a.a.a.b	ENSGT01090000260044.A.a.b.a.a.a.b	ENSGT01090000260044.A.a.b.a.a.b	ENSGT01090000260044.A.a.b.a.a.a.a.a.a.b	ENSGT00390000006224 #30	ENSGT00390000014984 #31
American mink	MODERN SPECIES	99	ENSNVIG00000016094	ENSNVIG00000016104	GUCA2B (ENSNVIG00000016106)	GUCA2A (ENSNVIG00000016111)	FOXJ3 (ENSNVIG00000016128)	ENSNVIG00000016219	RIMKLA (ENSNVIG00000016225)	ZMYND12 (ENSNVIG00000016240)	PPCS (ENSNVIG00000016252)	ENSNVIG00000016265	ENSNVIG00000016303	PPIH (ENSNVIG00000016325)	ENSNVIG00000016401	CLDN19 (ENSNVIG00000016433)	P3H1 (ENSNVIG00000016490)	C1orf50 (ENSNVIG00000016518) #22	ENSNVIG00000016541 #23	SVBP (ENSNVIG00000016564) #24	ERMAP (ENSNVIG00000016577) #26	ZNF691 (ENSNVIG00000016612) #27	SLC2A1 (ENSNVIG00000016630) #29	ENSNVIG00000016659	ENSNVIG00000016692	ENSNVIG00000016713	ENSNVIG00000016747	ENSNVIG00000016761	ENSNVIG00000016767	ENSNVIG00000016771	CFAP144 (ENSNVIG00000016776) #30	EBP2 (ENSNVIG00000016787) #31	CFAP57 (ENSNVIG00000016810) #32
Ferret	MODERN SPECIES	167	EDN2 (ENSMPUG00000014076)	ENSMPUG00000014071	HIVEP3 (ENSMPUG00000014066)	GUCA2B (ENSMPUG00000014055)	GUCA2A (ENSMPUG00000014052)	FOXJ3 (ENSMPUG00000014045)	RIMKLA (ENSMPUG00000014040)	ZMYND12 (ENSMPUG00000014038)	PPCS (ENSMPUG00000014036)	ENSMPUG00000014033	CCDC30 (ENSMPUG00000014003)	ENSMPUG00000013966	ENSMPUG00000013922	CLDN19 (ENSMPUG00000013920)	P3H1 (ENSMPUG00000013834)	C1orf50 (ENSMPUG00000013823) #22	ENSMPUG00000013820 #23	ERMAP (ENSMPUG00000013797) #26	ZNF691 (ENSMPUG00000013792) #27	SLC2A1 (ENSMPUG00000013787) #29	ENSMPUG00000013783	ENSMPUG00000018588	ENSMPUG00000018586	ENSMPUG00000018585	ENSMPUG00000018584	ENSMPUG00000018583	ENSMPUG00000013781	CFAP144 (ENSMPUG00000013780) #30	EBNA1BP2 (ENSMPUG00000013779) #31	CFAP57 (ENSMPUG00000013770) #32	TMEM125 (ENSMPUG00000018582) #33
Canidae	ANCESTRAL SPECIES	12	ENSGT00940000161401	ENSGT00950000183053.A	ENSGT00940000157218.C	ENSGT00940000154436.b	ENSGT00940000154436.a	ENSGT00940000160362	ENSGT00390000014577.b	ENSGT00390000004248	ENSGT00950000182834.C	ENSGT00940000167024	ENSGT00390000007816	ENSGT00940000154721	ENSGT00940000153341.b.p.a.a	ENSGT00940000158624	ENSGT00940000158725	ENSGT00390000003084 #22	ENSGT00940000154169.B #23	ENSGT00390000006113 #24	ENSGT00940000160531 #26	ENSGT00940000161958 #27	ENSGT00940000156792 #29	ENSGT00940000160928	ENSGT01090000260044.A.a.b.a.a.a.a.a.a.a	ENSGT01090000260044.A.a.b.a.a.a.a.b	ENSGT01090000260044.A.a.b.a.a.a.a.a.b	ENSGT01090000260044.A.a.b.a.a.a.b	ENSGT01090000260044.A.a.b.a.a.b
Canis_lupus	ANCESTRAL SPECIES	16	ENSGT00940000161401	ENSGT00950000183053.A	ENSGT00940000157218.C	ENSGT00940000154436.b	ENSGT00940000154436.a	ENSGT00940000160362	ENSGT00390000014577.b	ENSGT00390000004248	ENSGT00950000182834.C	ENSGT00940000167024	ENSGT00390000007816	ENSGT00940000154721	ENSGT00940000153341.b.p.a.a	ENSGT00940000158624	ENSGT00940000158725	ENSGT00390000003084 #22	ENSGT00940000154169.B #23	ENSGT00390000006113 #24	ENSGT00940000160531 #26	ENSGT00940000161958 #27	ENSGT00940000156792 #29	ENSGT00940000160928	ENSGT01090000260044.A.a.b.a.a.a.a.a.b	ENSGT01090000260044.A.a.b.a.a.a.b	ENSGT01090000260044.A.a.b.a.a.b
Dingo	MODERN SPECIES	344	ENSCAFG00020003014	HIVEP3 (ENSCAFG00020003007)	GUCA2B (ENSCAFG00020002992)	GUCA2A (ENSCAFG00020002988)	ENSCAFG00020002985	ENSCAFG00020002970	RIMKLA (ENSCAFG00020002966)	ENSCAFG00020002961	PPCS (ENSCAFG00020002958)	ENSCAFG00020002938	ENSCAFG00020002934	PPIH (ENSCAFG00020002933)	ENSCAFG00020002915	CLDN19 (ENSCAFG00020002906)	P3H1 (ENSCAFG00020002341)	C1orf50 (ENSCAFG00020002308) #22	ENSCAFG00020002296 #23	SVBP (ENSCAFG00020002290) #24	ERMAP (ENSCAFG00020002272) #26	ZNF691 (ENSCAFG00020002267) #27	SLC2A1 (ENSCAFG00020002164) #29	ENSCAFG00020002137	ENSCAFG00020002126	ENSCAFG00020002123	ENSCAFG00020002116
Dog	MODERN SPECIES	6	EDN2 (ENSCAFG00845008596)	HIVEP3 (ENSCAFG00845008551)	ENSCAFG00845008525	ENSCAFG00845008507	GUCA2B (ENSCAFG00845008466)	GUCA2A (ENSCAFG00845017500)	FOXJ3 (ENSCAFG00845017313)	ENSCAFG00845017232	ZMYND12 (ENSCAFG00845017105)	PPCS (ENSCAFG00845016998)	CCDC30 (ENSCAFG00845016827)	PPIH (ENSCAFG00845016259)	YBX1 (ENSCAFG00845016135)	CLDN19 (ENSCAFG00845016079)	P3H1 (ENSCAFG00845015744)	C15H1orf50 (ENSCAFG00845015599) #22	ENSCAFG00845015547 #23	SVBP (ENSCAFG00845015518) #24	ERMAP (ENSCAFG00845015470) #26	ZNF691 (ENSCAFG00845015322) #27	SLC2A1 (ENSCAFG00845015278) #29	ENSCAFG00845015197	OR13P3 (ENSCAFG00845015165)	OR13P4 (ENSCAFG00845015148)	ENSCAFG00845015126	ENSCAFG00845015106
Red fox	DUPLICATION
Red fox	MODERN SPECIES	183	SCMH1 (ENSVVUG00000002129)	ENSVVUG00000002106	EDN2 (ENSVVUG00000002072)	HIVEP3 (ENSVVUG00000002055)	GUCA2B (ENSVVUG00000002020)	GUCA2A (ENSVVUG00000002000)	FOXJ3 (ENSVVUG00000001974)	RIMKLA (ENSVVUG00000001955)	ZMYND12 (ENSVVUG00000001924)	PPCS (ENSVVUG00000001916)	CCDC30 (ENSVVUG00000001835)	PPIH (ENSVVUG00000001795)	ENSVVUG00000001759	CLDN19 (ENSVVUG00000001740)	P3H1 (ENSVVUG00000001729)	ENSVVUG00000001725 #22	ENSVVUG00000001718 #23	SVBP (ENSVVUG00000001709) #24	ERMAP (ENSVVUG00000001657) #26	ZNF691 (ENSVVUG00000001636) #27	SLC2A1 (ENSVVUG00000001613) #29	ENSVVUG00000001560	ENSVVUG00000001511	ENSVVUG00000001436	ENSVVUG00000001348	ENSVVUG00000026997
Red fox	MODERN SPECIES	53													CDH6 (ENSVVUG00000000446)	ENSVVUG00000000102	CDH9 (ENSVVUG00000000062)	ENSVVUG00000030312 #22	CDH10 (ENSVVUG00000030310)	ENSVVUG00000030304	CDH12 (ENSVVUG00000030295)	ENSVVUG00000030292	CDH18 (ENSVVUG00000030291)	ENSVVUG00000030279	MYO10 (ENSVVUG00000030278)	ZNF622 (ENSVVUG00000030273)	ENSVVUG00000030264	ANKH (ENSVVUG00000030256)
Atlantogenata	ANCESTRAL SPECIES	11	ENSGT00950000183053.A	ENSGT00940000157218.C	ENSGT00940000154436.b	ENSGT00940000154436.a	ENSGT00940000160362	ENSGT00390000014577.b	ENSGT00390000004248	ENSGT00950000182834.C	ENSGT00390000000654	ENSGT00940000167024	ENSGT00390000007816	ENSGT00940000154721	ENSGT00940000153341.b.p.a.a	ENSGT00940000158624	ENSGT00940000158725	ENSGT00390000003084 #22	ENSGT00940000154169.B #23	ENSGT00390000006113 #24	ENSGT00940000160531 #26	ENSGT00940000161958 #27	ENSGT00940000156792 #29	ENSGT00940000160928	ENSGT01090000260044.A.a.b.a.b	ENSGT01090000260044.A.a.b.a.a.a.a.b	ENSGT01090000260044.A.a.b.a.a.a.a.a.b	ENSGT01090000260044.A.a.b.a.a.a.b	ENSGT01090000260044.A.a.b.a.a.b	ENSGT01090000260044.A.a.b.a.a.a.a.a.a.b	ENSGT00390000006224 #30	ENSGT00390000014984 #31	ENSGT00620000088018.g.a ##32
Xenarthra	ANCESTRAL SPECIES	200				ENSGT00940000154436.b	ENSGT00940000154436.a	ENSGT00940000160362	ENSGT00390000014577.b	ENSGT00390000004248	ENSGT00950000182834.C	ENSGT00940000167024	ENSGT00390000007816	ENSGT00940000154721	ENSGT00940000153341.b.p.a.b.b	ENSGT00940000158624	ENSGT00940000158725	ENSGT00390000003084 #22	ENSGT01050000245090.b	ENSGT00390000006113 #24	ENSGT00940000160531 #26	ENSGT00940000156792 #29
Armadillo	DUPLICATION
Armadillo	MODERN SPECIES	3635				GUCA2B (ENSDNOG00000033082)	GUCA2A (ENSDNOG00000013321)	FOXJ3 (ENSDNOG00000008585)	RIMKLA (ENSDNOG00000003110)	PPCS (ENSDNOG00000031592)	ZMYND12 (ENSDNOG00000003113)	ENSDNOG00000049545	ENSDNOG00000015828	PPIH (ENSDNOG00000035476)	YBX1 (ENSDNOG00000036760)	CLDN19 (ENSDNOG00000049057)	P3H1 (ENSDNOG00000025080)	ENSDNOG00000033003 #22	TMEM269 (ENSDNOG00000033480)	SVBP (ENSDNOG00000033303) #24	ERMAP (ENSDNOG00000044198) #26	SLC2A1 (ENSDNOG00000038485) #29
Armadillo	MODERN SPECIES	1466							ATP6V1C1 (ENSDNOG00000036633)	ENSDNOG00000010733	FZD6 (ENSDNOG00000030798)	CTHRC1 (ENSDNOG00000036937)	SLC25A32 (ENSDNOG00000040672)	DCAF13 (ENSDNOG00000044885)	RIMS2 (ENSDNOG00000010842)	DCSTAMP (ENSDNOG00000035488)	DPYS (ENSDNOG00000020001)	ENSDNOG00000014805 #22	LRP12 (ENSDNOG00000020002)	ENSDNOG00000040533	ZFPM2 (ENSDNOG00000045385)	ENSDNOG00000047338	OXR1 (ENSDNOG00000019921)	ABRA (ENSDNOG00000045203)	ANGPT1 (ENSDNOG00000002345)	ENSDNOG00000032756	ENSDNOG00000042997	ENSDNOG00000046953	RSPO2 (ENSDNOG00000034163)	ENSDNOG00000011854	EMC2 (ENSDNOG00000013708)	TMEM74 (ENSDNOG00000043766)	TRHR (ENSDNOG00000011914)
Afrotheria	ANCESTRAL SPECIES	42	ENSGT00950000183053.A	ENSGT00940000157218.C	ENSGT00940000154436.b	ENSGT00940000154436.a	ENSGT00940000160362	ENSGT00390000014577.b	ENSGT00390000004248	ENSGT00950000182834.C	ENSGT00940000167024	ENSGT00390000000654	ENSGT00390000007816	ENSGT00940000154721	ENSGT00940000153341.b.p.a.a	ENSGT00940000158624	ENSGT00940000158725	ENSGT00390000003084 #22	ENSGT00940000154169.B #23	ENSGT00390000006113 #24	ENSGT00940000160531 #26	ENSGT00940000161958 #27	ENSGT00940000156792 #29	ENSGT00940000160928	ENSGT01090000260044.A.a.b.a.b	ENSGT01090000260044.A.a.b.a.a.a.a.b	ENSGT01090000260044.A.a.b.a.a.a.a.a.b	ENSGT01090000260044.A.a.b.a.a.a.b	ENSGT01090000260044.A.a.b.a.a.b	ENSGT01090000260044.A.a.b.a.a.a.a.a.a.b	ENSGT00390000006224 #30	ENSGT00390000014984 #31	ENSGT00620000088018.g.b ##32
Afrotheria_a	ANCESTRAL SPECIES	42	ENSGT00950000183053.A	ENSGT00940000157218.C	ENSGT00940000154436.b	ENSGT00940000154436.a	ENSGT00940000160362	ENSGT00390000014577.b	ENSGT00390000004248	ENSGT00950000182834.C	ENSGT00390000000654	ENSGT00940000167024	ENSGT00390000007816	ENSGT00940000154721	ENSGT00940000153341.b.p.a.a	ENSGT00940000158624	ENSGT00940000158725	ENSGT00390000003084 #22	ENSGT00940000154169.B #23	ENSGT00390000006113 #24	ENSGT00940000160531 #26	ENSGT00940000161958 #27	ENSGT00940000156792 #29	ENSGT00940000160928	ENSGT01090000260044.A.a.b.a.b	ENSGT01090000260044.A.a.b.a.a.a.a.b	ENSGT01090000260044.A.a.b.a.a.a.a.a.b	ENSGT01090000260044.A.a.b.a.a.a.b	ENSGT01090000260044.A.a.b.a.a.b	ENSGT01090000260044.A.a.b.a.a.a.a.a.a.b	ENSGT00390000006224 #30	ENSGT00390000014984 #31	ENSGT00620000088018.g.b ##32
Elephant	MODERN SPECIES	332	EDN2 (ENSLAFG00000016624)	HIVEP3 (ENSLAFG00000017582)	GUCA2B (ENSLAFG00000007516)	GUCA2A (ENSLAFG00000007514)	FOXJ3 (ENSLAFG00000017663)	RIMKLA (ENSLAFG00000016566)	ZMYND12 (ENSLAFG00000016574)	PPCS (ENSLAFG00000009743)	ENSLAFG00000032280	ENSLAFG00000026474	ENSLAFG00000007591	PPIH (ENSLAFG00000016205)	ENSLAFG00000007597	CLDN19 (ENSLAFG00000007600)	P3H1 (ENSLAFG00000031418)	C1orf50 (ENSLAFG00000007612) #22	ENSLAFG00000027727 #23	SVBP (ENSLAFG00000007616) #24	ENSLAFG00000029555 #26	ENSLAFG00000008156 #26	ZNF691 (ENSLAFG00000008158) #27	SLC2A1 (ENSLAFG00000015112) #29	ENSLAFG00000027076	ENSLAFG00000031529	ENSLAFG00000030251	ENSLAFG00000025880	ENSLAFG00000022187	ENSLAFG00000031456	ENSLAFG00000005605	ENSLAFG00000032238	CFAP144 (ENSLAFG00000018679) #30
Hyrax	MODERN SPECIES	4695														ENSPCAG00000000308	P3H1 (ENSPCAG00000000317)	C1orf50 (ENSPCAG00000000339) #22
Tenrec	DUPLICATION
Tenrec	MODERN SPECIES	5553																ENSETEG00000013385 #22
Tenrec	MODERN SPECIES	19080																ENSETEG00000013915 #22
Marsupialia	ANCESTRAL SPECIES	10	ENSGT00950000183053.A	ENSGT00940000157218.C	ENSGT00940000154436.b	ENSGT00940000154436.a	ENSGT00940000160362	ENSGT00390000014577.b	ENSGT00390000004248	ENSGT00950000182834.C	ENSGT00940000165031	ENSGT00390000007816	ENSGT00940000154721	ENSGT00940000153341.b.q.a	ENSGT00940000165186.C	ENSGT00940000158624	ENSGT00940000158725	ENSGT00390000003084 #22	ENSGT00940000154169.B #23	ENSGT00390000006113 #24	ENSGT00940000160531 #26	ENSGT00940000156792 #29	ENSGT00940000160928	ENSGT01090000260044.A.a.b.a.b	ENSGT01090000260044.A.a.b.a.a.a.b	ENSGT00940000161580.a	ENSGT00940000160840	ENSGT00940000156275	ENSGT00940000158433	ENSGT01030000234623.a.a.b	ENSGT00940000155104	ENSGT00510000047363	ENSGT00940000155058
Opossum	MODERN SPECIES	3	SCMH1 (ENSMODG00000017337)	FOXO6 (ENSMODG00000017333)	ENSMODG00000028067	HIVEP3 (ENSMODG00000017330)	ENSMODG00000017324	ENSMODG00000017322	FOXJ3 (ENSMODG00000017320)	RIMKLA (ENSMODG00000017315)	ZMYND12 (ENSMODG00000017311)	ENSMODG00000017230	PPIH (ENSMODG00000017226)	YBX1 (ENSMODG00000017214)	ENSMODG00000028196	CLDN19 (ENSMODG00000017174)	P3H1 (ENSMODG00000017171)	C1orf50 (ENSMODG00000017159) #22	ENSMODG00000025586 #23	SVBP (ENSMODG00000039243) #24	ERMAP (ENSMODG00000017153) #26	SLC2A1 (ENSMODG00000017148) #29	ENSMODG00000017141	ENSMODG00000050145	ENSMODG00000037229	ENSMODG00000023292	ENSMODG00000051065	ENSMODG00000017132	ZSCAN20 (ENSMODG00000017129)	ENSMODG00000043984	PHC2 (ENSMODG00000017114)	ZNF362 (ENSMODG00000017096)	TRIM62 (ENSMODG00000017094)
Marsupialia_b	ANCESTRAL SPECIES	4	ENSGT00940000161401	ENSGT00950000183053.A	ENSGT00940000157218.C	ENSGT00940000154436.b	ENSGT00940000154436.a	ENSGT00940000160362	ENSGT00390000014577.b	ENSGT00390000004248	ENSGT00950000182834.C	ENSGT00390000007816	ENSGT00940000154721	ENSGT00940000153341.b.q.a	ENSGT00940000165186.C	ENSGT00940000158624	ENSGT00940000158725	ENSGT00390000003084 #22	ENSGT00390000006113 #24	ENSGT00940000160531 #26	ENSGT00940000156792 #29	ENSGT00940000160928	ENSGT01090000260044.A.a.b.a.b	ENSGT01090000260044.A.a.b.a.a.a.b	ENSGT00940000161580.b	ENSGT00940000161580.a	ENSGT00940000160840	ENSGT00940000156275	ENSGT00940000158433	ENSGT01030000234623.a.a.b	ENSGT00940000155104	ENSGT00510000047363	ENSGT00940000155058
Tasmanian devil	DUPLICATION
Tasmanian devil	MODERN SPECIES	2	SCMH1 (ENSSHAG00000007573)	ENSSHAG00000031836	ENSSHAG00000005596	ENSSHAG00000021806	GUCA2B (ENSSHAG00000011930)	ENSSHAG00000028799	FOXJ3 (ENSSHAG00000012097)	RIMKLA (ENSSHAG00000023369)	ZMYND12 (ENSSHAG00000013490)	PPCS (ENSSHAG00000023974)	ENSSHAG00000013937	YBX1 (ENSSHAG00000014452)	PPIH (ENSSHAG00000021231)	CLDN19 (ENSSHAG00000031273)	P3H1 (ENSSHAG00000014745)	ENSSHAG00000029150 #22	ERMAP (ENSSHAG00000014907) #26	ENSSHAG00000026590 #29	ENSSHAG00000004695	ENSSHAG00000024511	ENSSHAG00000028636	ENSSHAG00000025510	ENSSHAG00000025392	ENSSHAG00000002107	ENSSHAG00000020871	ENSSHAG00000031166	ENSSHAG00000030601	ENSSHAG00000004699	ENSSHAG00000005539	ENSSHAG00000006099	ENSSHAG00000002109
Tasmanian devil	MODERN SPECIES		C5orf63 (ENSSHAG00000021915)	LMNB1 (ENSSHAG00000012393)	ENSSHAG00000012844	PHAX (ENSSHAG00000013010)	ALDH7A1 (ENSSHAG00000013162)	GRAMD2B (ENSSHAG00000001030)	ENSSHAG00000000825	ENSSHAG00000024192	ENSSHAG00000004260	ENSSHAG00000000453	ENSSHAG00000021156	ENSSHAG00000001986	MAN2A1 (ENSSHAG00000008182)	ENSSHAG00000012210	FER (ENSSHAG00000000979)	ENSSHAG00000025170 #22	FBXL17 (ENSSHAG00000028745)	EFNA5 (ENSSHAG00000024211)	NUDT12 (ENSSHAG00000003181)	ENSSHAG00000029665	MACIR (ENSSHAG00000031554)	PPIP5K2 (ENSSHAG00000001399)	GIN1 (ENSSHAG00000000694)	PAM (ENSSHAG00000022133)	ENSSHAG00000001507	ENSSHAG00000031750	ENSSHAG00000026188	ENSSHAG00000026686	ENSSHAG00000001053	ENSSHAG00000017733	ENSSHAG00000017686
Diprotodontia	ANCESTRAL SPECIES	3	ENSGT00950000183053.A	ENSGT00940000157218.C	ENSGT00940000154436.b	ENSGT00940000154436.a	ENSGT00940000160362	ENSGT00390000014577.b	ENSGT00390000004248	ENSGT00950000182834.C	ENSGT00940000165031	ENSGT00390000007816	ENSGT00940000154721	ENSGT00940000153341.b.q.a	ENSGT00940000165186.C	ENSGT00940000158624	ENSGT00940000158725	ENSGT00390000003084 #22	ENSGT00390000006113 #24	ENSGT00940000160531 #26	ENSGT00940000156792 #29	ENSGT00940000160928	ENSGT01090000260044.A.a.b.a.b	ENSGT01090000260044.A.a.b.a.a.a.b	ENSGT00940000161580.b	ENSGT00940000161580.a	ENSGT00940000160840	ENSGT00940000156275	ENSGT00940000158433	ENSGT01030000234623.a.a.b	ENSGT00940000155104	ENSGT00510000047363	ENSGT00940000155058
Diprotodontia_a	ANCESTRAL SPECIES	4	ENSGT00940000161401	ENSGT00950000183053.A	ENSGT00940000157218.C	ENSGT00940000154436.b	ENSGT00940000154436.a	ENSGT00940000160362	ENSGT00390000014577.b	ENSGT00390000004248	ENSGT00950000182834.C	ENSGT00940000165031	ENSGT00940000154721	ENSGT00940000153341.b.q.a	ENSGT00940000165186.C	ENSGT00940000158624	ENSGT00940000158725	ENSGT00390000003084 #22	ENSGT00390000006113 #24	ENSGT00940000160531 #26	ENSGT00940000156792 #29	ENSGT00940000160928	ENSGT01090000260044.A.a.b.a.b.n	ENSGT01090000260044.A.a.b.a.b.m	ENSGT01090000260044.A.a.b.a.a.a.b	ENSGT00940000161580.b	ENSGT00940000161580.a	ENSGT00940000160840	ENSGT00940000156275	ENSGT00940000158433	ENSGT01030000234623.a.a.b	ENSGT00940000155104.rb.b	ENSGT00510000047363
Common wonbat	DUPLICATION
Common wonbat	MODERN SPECIES	803														ENSVURG00010011842	ENSVURG00010011863	ENSVURG00010012044 #22
Common wonbat	MODERN SPECIES	806														ENSVURG00010012063	ENSVURG00010012096	ENSVURG00010012462 #22
koala	MODERN SPECIES	14	FOXO6 (ENSPCIG00000028688)	ENSPCIG00000034095	HIVEP3 (ENSPCIG00000028687)	ENSPCIG00000034711	ENSPCIG00000009183	FOXJ3 (ENSPCIG00000009172)	RIMKLA (ENSPCIG00000009170)	ZMYND12 (ENSPCIG00000009168)	ENSPCIG00000009167	ENSPCIG00000009159	ENSPCIG00000009154	YBX1 (ENSPCIG00000009151)	ENSPCIG00000034606	CLDN19 (ENSPCIG00000009141)	P3H1 (ENSPCIG00000009135)	C1orf50 (ENSPCIG00000034770) #22	SVBP (ENSPCIG00000028099) #24	ENSPCIG00000000100 #26	SLC2A1 (ENSPCIG00000000549) #29	ENSPCIG00000027297	ENSPCIG00000003019	ENSPCIG00000005434	ENSPCIG00000034316	ENSPCIG00000014108	ENSPCIG00000014116	PHC2 (ENSPCIG00000014123)	ZNF362 (ENSPCIG00000014128)	TRIM62 (ENSPCIG00000014133)	SERINC2 (ENSPCIG00000014138)	ENSPCIG00000034380	ZCCHC17 (ENSPCIG00000014143)
Wallaby	MODERN SPECIES	2628															P3H1 (ENSMEUG00000010224)	C1orf50 (ENSMEUG00000010260) #22
Platypus	MODERN SPECIES	16	ENSOANG00000006343	SLC2A1 (ENSOANG00000015730) #29	ENSOANG00000038486	ENSOANG00000045959	FOXJ3 (ENSOANG00000009728)	PPIH (ENSOANG00000015321)	ENSOANG00000049545	ENSOANG00000009727	ENSOANG00000009726	ZMYND12 (ENSOANG00000009725)	RIMKLA (ENSOANG00000009723)	YBX1 (ENSOANG00000011725)	ENSOANG00000011724	CLDN19 (ENSOANG00000048117)	P3H1 (ENSOANG00000009375)	C1orf50 (ENSOANG00000007982) #22	ENSOANG00000000323 #23	SVBP (ENSOANG00000042819) #24	ENSOANG00000038813 #26	ENSOANG00000039247 #26	ENSOANG00000037060 #27	ENSOANG00000011720	ENSOANG00000036277	ENSOANG00000007847	ENSOANG00000036326	ENSOANG00000039402	ENSOANG00000039887	WNT4 (ENSOANG00000036915)	CDC42 (ENSOANG00000046752)	ENSOANG00000012297	ENSOANG00000043977
Sauria	ANCESTRAL SPECIES	19	ENSGT00940000158433	ENSGT00940000156275	ENSGT00950000182858.C	ENSGT00940000160840	ENSGT00940000156792 #29	ENSGT00390000004248	ENSGT00940000169116	ENSGT00950000182834.C	ENSGT00940000165031	ENSGT00940000154721	ENSGT00940000153341.b	ENSGT00940000165186.A	ENSGT00940000165186.C	ENSGT00940000158624	ENSGT00940000158725	ENSGT00390000003084 #22	ENSGT00940000153675.a.a.b	ENSGT00940000159654	ENSGT00930000151052	ENSGT00940000160469	ENSGT00940000162143	ENSGT00940000161227	ENSGT00940000161091	ENSGT00940000155503	ENSGT00450000040404.a	ENSGT00940000154436.a	ENSGT00940000154436.b	ENSGT00940000156265.x.a.b	ENSGT00940000156265.x.a.a
Lepidosauria	ANCESTRAL SPECIES	135												ENSGT00940000165186.A	ENSGT00940000165186.C	ENSGT00940000158624	ENSGT00940000158725	ENSGT00390000003084 #22	ENSGT00940000153675.a.a.b	ENSGT00940000159654	ENSGT00940000160469	ENSGT00940000162143	ENSGT00940000161227	ENSGT00940000161091	ENSGT00940000155503	ENSGT00450000040404.a	ENSGT00940000154436.a	ENSGT00940000156265.x.a.b	ENSGT00940000156265.x.a.a
Episquamata	ANCESTRAL SPECIES	16	ENSGT00940000160951	ENSGT01030000234571.a.b	ENSGT00940000156971.B	ENSGT00390000001652.f.a	ENSGT00390000003623	ENSGT00950000183153.c.b.a.b	ENSGT00940000154171.B	ENSGT00990000205429	ENSGT00390000014309	ENSGT00390000004367	ENSGT00950000182914.a.a.b	ENSGT00940000165186.A	ENSGT00940000165186.C	ENSGT00940000158624	ENSGT00940000158725	ENSGT00390000003084 #22	ENSGT00940000153675.a.a.b	ENSGT00940000159654	ENSGT00940000160469	ENSGT00940000162143	ENSGT00940000161227	ENSGT00940000161091	ENSGT00940000155503	ENSGT00450000040404.a	ENSGT01000000218068	ENSGT00940000161800	ENSGT00950000183083.b	ENSGT00940000158724	ENSGT00940000164442.A.g.b	ENSGT00940000164442.A.g.a	ENSGT00940000163565.c.a
Laterata	ANCESTRAL SPECIES	29	ENSGT00940000160951	ENSGT01030000234571.a.b	ENSGT00940000156971.B	ENSGT00390000001652.f.a	ENSGT00390000003623	ENSGT00950000183153.c.b.a.b	ENSGT00940000154171.B	ENSGT00990000205429	ENSGT00390000014309	ENSGT00390000004367	ENSGT00950000182914.a.a.b	ENSGT00940000165186.A	ENSGT00940000165186.C	ENSGT00940000158624	ENSGT00940000158725	ENSGT00390000003084 #22	ENSGT00940000153675.a.a.b	ENSGT00940000159654	ENSGT00940000160469	ENSGT00940000162143	ENSGT00940000161227	ENSGT00940000161091	ENSGT00940000155503	ENSGT00450000040404.a	ENSGT01000000218068	ENSGT00940000156265.x.a.b	ENSGT00940000156265.x.a.a
Common wall lizard	MODERN SPECIES	16	ENSPMRG00000009148	ENSPMRG00000009140	DHRS3 (ENSPMRG00000009131)	VPS13D (ENSPMRG00000009081)	ENSPMRG00000009027	TNFRSF1B (ENSPMRG00000009019)	ENSPMRG00000009008	ENSPMRG00000008999	MRPS16 (ENSPMRG00000008985)	SLC45A1 (ENSPMRG00000008956)	ENSPMRG00000008945	ENSPMRG00000008938	CLDN19 (ENSPMRG00000008933)	ENSPMRG00000008926	P3H1 (ENSPMRG00000008919)	C1orf50 (ENSPMRG00000008914) #22	CDC42 (ENSPMRG00000008906)	WNT4 (ENSPMRG00000008895)	EPHA8 (ENSPMRG00000008889)	C1QA (ENSPMRG00000008880)	C1QC (ENSPMRG00000008872)	C1QB (ENSPMRG00000008869)	EPHB2 (ENSPMRG00000008863)	LACTBL1 (ENSPMRG00000008857)	ENSPMRG00000008853	ENSPMRG00000008847	ENSPMRG00000008841	ENSPMRG00000008829	ENSPMRG00000008819	TP73 (ENSPMRG00000008786)	WRAP73 (ENSPMRG00000008757)
Argentine black and white tegu	MODERN SPECIES	60	FAM43B (ENSSMRG00000007960)	ENSSMRG00000007967	ENSSMRG00000007970	CDA (ENSSMRG00000007986)	PINK1 (ENSSMRG00000007989)	AGMAT (ENSSMRG00000007992)	DNAJC16 (ENSSMRG00000007994)	CASP9 (ENSSMRG00000008003)	ENSSMRG00000008005	ENSSMRG00000008006	EFHD2 (ENSSMRG00000008057)	FHAD1 (ENSSMRG00000008059)	ENSSMRG00000008064	CLDN19 (ENSSMRG00000008065)	P3H1 (ENSSMRG00000008076)	C1orf50 (ENSSMRG00000008710) #22	CDC42 (ENSSMRG00000008711)	WNT4 (ENSSMRG00000008712)	EPHA8 (ENSSMRG00000008717)	C1QA (ENSSMRG00000008815)	C1QC (ENSSMRG00000008817)	C1QB (ENSSMRG00000008818)	EPHB2 (ENSSMRG00000008819)	LACTBL1 (ENSSMRG00000008823)	ENSSMRG00000008832	ENSSMRG00000008833	ENSSMRG00000008841	ENSSMRG00000008843	ENSSMRG00000008846	TNFRSF1B (ENSSMRG00000008847)	VPS13D (ENSSMRG00000008854)
Toxicofera	ANCESTRAL SPECIES	70				ENSGT00940000156971.B	ENSGT00390000001652.f.a	ENSGT00390000003623	ENSGT00950000183153.c.b.a.b	ENSGT00940000154171.B	ENSGT00390000014309	ENSGT00390000004367	ENSGT00950000182914.a.a.b	ENSGT00940000165186.A	ENSGT00940000165186.C	ENSGT00940000158624.i	ENSGT00940000158725	ENSGT00390000003084 #22	ENSGT00940000153675.a.a.b	ENSGT00940000159654	ENSGT00940000160469
Elapidae	ANCESTRAL SPECIES	63					ENSGT00940000156971.B	ENSGT00390000001652.f.a	ENSGT00390000003623	ENSGT00950000183153.c.b.a.b	ENSGT00940000154171.B	ENSGT00390000014309	ENSGT00390000004367	ENSGT00950000182914.a.a.b	ENSGT00940000165186.C	ENSGT00940000158624.i	ENSGT00940000158725	ENSGT00390000003084 #22	ENSGT00940000153675.a.a.b	ENSGT00940000159654	ENSGT00940000160469
Elapidae_a	ANCESTRAL SPECIES	150								ENSGT00950000183153.c.b.a.b	ENSGT00940000154171.B	ENSGT00390000014309	ENSGT00390000004367	ENSGT00950000182914.a.a.b	ENSGT00940000165186.C	ENSGT00940000158624.i	ENSGT00940000158725	ENSGT00390000003084 #22	ENSGT00940000153675.a.a.b	ENSGT00940000159654	ENSGT00940000160469.b
Acanthophiinae	ANCESTRAL SPECIES	141								ENSGT00950000183153.c.b.a.b	ENSGT00940000154171.B	ENSGT00390000014309	ENSGT00390000004367	ENSGT00950000182914.a.a.b	ENSGT00940000165186.C	ENSGT00940000158624.i	ENSGT00940000158725	ENSGT00390000003084 #22	ENSGT00940000153675.a.a.b	ENSGT00940000159654	ENSGT00940000160469.b
Mainland tiger snake	MODERN SPECIES	2367																C1orf50 (ENSNSUG00000000485) #22
Eastern brown snake	MODERN SPECIES	283								TP73 (ENSPTXG00000016704)	ENSPTXG00000016773	ENSPTXG00000016775	MRPS16 (ENSPTXG00000016776)	SLC45A1 (ENSPTXG00000016777)	ENSPTXG00000016778	CLDN19 (ENSPTXG00000016779)	P3H1 (ENSPTXG00000016780)	C1orf50 (ENSPTXG00000016781) #22	CDC42 (ENSPTXG00000016783)	WNT4 (ENSPTXG00000016785)	ENSPTXG00000016787
Blue-lipped sea krait	MODERN SPECIES	2502								TP73 (ENSLLTG00000006910)	ENSLLTG00000006766	MRPS16 (ENSLLTG00000006720)	ENSLLTG00000006680	SLC45A1 (ENSLLTG00000006636)	ENSLLTG00000006586	CLDN19 (ENSLLTG00000006572)	P3H1 (ENSLLTG00000006531)	C1orf50 (ENSLLTG00000006503) #22	CDC42 (ENSLLTG00000006481)	WNT4 (ENSLLTG00000006453)
Indian cobra	MODERN SPECIES	9				ENSNNAG00000010231	DRAXIN (ENSNNAG00000010282)	MAD2L2 (ENSNNAG00000010328)	ENSNNAG00000010464	FBXO2 (ENSNNAG00000010505)	MTHFR (ENSNNAG00000010538)	TPRG1L (ENSNNAG00000010567)	WRAP73 (ENSNNAG00000010592)	TP73 (ENSNNAG00000010689)	ENSNNAG00000010782	ENSNNAG00000010824	P3H1 (ENSNNAG00000010903)	C1orf50 (ENSNNAG00000011399) #22	CDC42 (ENSNNAG00000011430)	WNT4 (ENSNNAG00000011485)	ENSNNAG00000011500	DHRS3 (ENSNNAG00000011527)	ENSNNAG00000011629	ENSNNAG00000011681	LACTBL1 (ENSNNAG00000011729)	ENSNNAG00000011802	ENSNNAG00000011823	KIAA2013 (ENSNNAG00000011839)	ENSNNAG00000011846	ENSNNAG00000011866	MFN2 (ENSNNAG00000011884)	ENSNNAG00000011949	ENSNNAG00000012006
tuatara	MODERN SPECIES	58														CLDN19 (ENSSPUG00000004853)	P3H1 (ENSSPUG00000004838)	C1orf50 (ENSSPUG00000004828) #22	CDC42 (ENSSPUG00000004816)	WNT4 (ENSSPUG00000004804)
Archelosauria	ANCESTRAL SPECIES	23	ENSGT00940000158433	ENSGT00940000156275	ENSGT00950000182858.C	ENSGT00940000160840	ENSGT00940000156792 #29	ENSGT00390000004248	ENSGT00940000169116	ENSGT00950000182834.C	ENSGT00940000165031	ENSGT00940000154721	ENSGT00940000153341.b	ENSGT00940000165186.A	ENSGT00940000165186.C	ENSGT00940000158624	ENSGT00940000158725	ENSGT00390000003084 #22	ENSGT00940000153675.a.a.b	ENSGT00940000159654	ENSGT00930000151052	ENSGT00940000160469	ENSGT00940000162143	ENSGT00940000161227	ENSGT00940000161091	ENSGT00940000155503	ENSGT00450000040404.a	ENSGT00940000154436.a	ENSGT00940000154436.b	ENSGT00940000156265.x.a.b	ENSGT00940000156265.x.a.a
Archosauria	ANCESTRAL SPECIES	21	ENSGT00940000154169.B #23	ENSGT00390000006113 #24	ENSGT00940000158433	ENSGT00940000156275	ENSGT00940000160840	ENSGT00940000156792 #29	ENSGT00390000004248	ENSGT00940000169116	ENSGT00950000182834.C	ENSGT00940000165031	ENSGT00940000154721	ENSGT00940000153341.b	ENSGT00940000165186.C	ENSGT00940000158624	ENSGT00940000158725	ENSGT00390000003084 #22	ENSGT00940000153675.a.a.b	ENSGT00940000159654	ENSGT00930000151052	ENSGT00940000160469	ENSGT00940000162143	ENSGT00940000161227	ENSGT00940000161091	ENSGT00940000155503	ENSGT00450000040404.a
Aves	ANCESTRAL SPECIES	27	ENSGT00940000154169.B #23	ENSGT00390000006113 #24	ENSGT00940000158433	ENSGT00940000156275	ENSGT00940000160840	ENSGT00940000156792 #29	ENSGT00390000004248	ENSGT00940000169116	ENSGT00950000182834.C	ENSGT00940000165031	ENSGT00940000154721	ENSGT00940000153341.b	ENSGT00940000165186.C	ENSGT00940000158624	ENSGT00940000158725	ENSGT00390000003084 #22	ENSGT00940000153675.a.a.b	ENSGT00940000159654	ENSGT00930000151052	ENSGT00940000160469	ENSGT00940000162143	ENSGT00940000161227	ENSGT00940000161091	ENSGT00940000155503	ENSGT00450000040404.a
Neognathae	ANCESTRAL SPECIES	25	ENSGT00940000154169.B #23	ENSGT00390000006113 #24	ENSGT00940000158433	ENSGT00940000156275	ENSGT00940000160840	ENSGT00940000156792 #29	ENSGT00390000004248	ENSGT00940000169116	ENSGT00950000182834.C	ENSGT00940000165031	ENSGT00940000154721	ENSGT00940000153341.b	ENSGT00940000165186.C	ENSGT00940000158624	ENSGT00940000158725	ENSGT00390000003084 #22	ENSGT00940000153675.a.a.b	ENSGT00940000159654	ENSGT00930000151052	ENSGT00940000160469	ENSGT00940000162143	ENSGT00940000161227	ENSGT00940000161091	ENSGT00940000155503	ENSGT00450000040404.a	ENSGT00940000154436.b
Neognathae_b	ANCESTRAL SPECIES	25	ENSGT01030000234528.B.b.b	ENSGT00940000154169.B #23	ENSGT00390000006113 #24	ENSGT00940000158433	ENSGT00940000156275	ENSGT00940000160840	ENSGT00940000156792 #29	ENSGT00390000004248	ENSGT00950000182834.C	ENSGT00940000165031	ENSGT00940000154721	ENSGT00940000153341.b	ENSGT00940000165186.C	ENSGT00940000158624	ENSGT00940000158725	ENSGT00390000003084 #22	ENSGT00940000153675.a.a.b	ENSGT00940000159654	ENSGT00930000151052	ENSGT00940000160469	ENSGT00940000162143	ENSGT00940000161227	ENSGT00940000161091	ENSGT00940000155503	ENSGT00450000040404.a	ENSGT00940000154436.b
Passeriformes	ANCESTRAL SPECIES	22	ENSGT00940000153395.b	ENSGT00940000159408	ENSGT00940000160929	ENSGT00940000157931	ENSGT00390000012439	ENSGT00930000151037	ENSGT00940000157064.a.a	ENSGT00390000015408	ENSGT00870000136521	ENSGT00940000161512	ENSGT00940000154721	ENSGT00940000153341.b	ENSGT00940000165186.C	ENSGT00940000158624	ENSGT00940000158725	ENSGT00390000003084 #22	ENSGT00940000153675.a.a.b	ENSGT00940000159654	ENSGT00940000160469	ENSGT00940000162143	ENSGT00940000161227	ENSGT00940000161091	ENSGT00940000155503	ENSGT00450000040404.a	ENSGT00940000154171.A	ENSGT01030000234528.B.a.a.`b.b	ENSGT00990000212679	ENSGT00390000012058.c.b	ENSGT01030000234528.B.a.a.`b.a	ENSGT00940000159698	ENSGT00940000155851
Great tit	MODERN SPECIES	13	MAD2L2 (ENSPMJG00000006068)	FBXO44 (ENSPMJG00000006066)	FBXO2 (ENSPMJG00000006063)	DISP3 (ENSPMJG00000006053)	UBIAD1 (ENSPMJG00000006024)	ANGPTL7 (ENSPMJG00000006018)	MTOR (ENSPMJG00000003120)	EXOSC10 (ENSPMJG00000003115)	SRM (ENSPMJG00000003054)	HIPK4 (ENSPMJG00000003053)	PPIH (ENSPMJG00000003049)	YBX1 (ENSPMJG00000003046)	ENSPMJG00000002905	CLDN19 (ENSPMJG00000002897)	P3H1 (ENSPMJG00000002885)	C1orf50 (ENSPMJG00000002882) #22	CDC42 (ENSPMJG00000002876)	WNT4 (ENSPMJG00000002870)	EPHA8 (ENSPMJG00000002838)	C1QA (ENSPMJG00000002794)	C1QC (ENSPMJG00000002789)	C1QB (ENSPMJG00000002787)	EPHB2 (ENSPMJG00000002774)	LACTBL1 (ENSPMJG00000002736)	ENSPMJG00000002719	ENSPMJG00000002714	ENSPMJG00000002713	CASP9 (ENSPMJG00000002704)	DNAJC16 (ENSPMJG00000002700)	PINK1 (ENSPMJG00000002689)	CDA (ENSPMJG00000002685)
Passeriformes_d	ANCESTRAL SPECIES	22	ENSGT00940000153395.b	ENSGT00940000159408	ENSGT00940000160929	ENSGT00940000157931	ENSGT00390000012439	ENSGT00930000151037	ENSGT00940000157064.a.a	ENSGT00390000015408	ENSGT00870000136521	ENSGT00940000161512	ENSGT00940000154721	ENSGT00940000153341.b	ENSGT00940000165186.C	ENSGT00940000158624	ENSGT00940000158725	ENSGT00390000003084 #22	ENSGT00940000153675.a.a.b	ENSGT00940000159654	ENSGT00940000160469	ENSGT00940000162143	ENSGT00940000161227	ENSGT00940000161091	ENSGT00940000155503	ENSGT00450000040404.a	ENSGT00940000154171.A	ENSGT00390000012058.c.b	ENSGT01030000234528.B.a.a.`b.b	ENSGT01030000234528.B.a.a.`b.a	ENSGT00940000159698	ENSGT00940000155851	ENSGT00950000183195.a
Passeriformes_g	ANCESTRAL SPECIES	35										ENSGT00940000161512	ENSGT00940000154721	ENSGT00940000153341.b	ENSGT00940000165186.C	ENSGT00940000158624	ENSGT00940000158725	ENSGT00390000003084 #22	ENSGT00940000153675.a.a.b	ENSGT00940000159654	ENSGT00940000160469	ENSGT00940000162143	ENSGT00940000161227	ENSGT00940000161091	ENSGT00940000155503	ENSGT00450000040404.a	ENSGT00990000212679	ENSGT00390000012058.c.b	ENSGT01030000234528.B.a.a.`b.b	ENSGT01030000234528.B.a.a.`b.a	ENSGT00940000159698	ENSGT00940000155851	ENSGT00950000183195.a
Passeroidea	ANCESTRAL SPECIES	26										ENSGT00940000161512	ENSGT00940000154721	ENSGT00940000153341.b	ENSGT00940000165186.C	ENSGT00940000158624	ENSGT00940000158725	ENSGT00390000003084 #22	ENSGT00940000153675.a.a.b	ENSGT00940000159654	ENSGT00940000160469	ENSGT00940000162143	ENSGT00940000161227	ENSGT00940000161091	ENSGT00940000155503	ENSGT00450000040404.a	ENSGT00940000154171.A	ENSGT00390000012058.c.b	ENSGT01030000234528.B.a.a.`b.a	ENSGT00940000159698	ENSGT00940000155851	ENSGT00950000183195.a	ENSGT00390000001206
Zebra finch	MODERN SPECIES	14										HIPK4 (ENSTGUG00000019053)	PPIH (ENSTGUG00000017267)	YBX1 (ENSTGUG00000017262)	ENSTGUG00000017260	CLDN19 (ENSTGUG00000017257)	P3H1 (ENSTGUG00000017255)	C1orf50 (ENSTGUG00000017254) #22	CDC42 (ENSTGUG00000027145)	WNT4 (ENSTGUG00000026088)	EPHA8 (ENSTGUG00000017239)	C1QA (ENSTGUG00000017238)	C1QC (ENSTGUG00000019687)	C1QB (ENSTGUG00000024860)	EPHB2 (ENSTGUG00000017194)	LACTBL1 (ENSTGUG00000024241)	EFHD2 (ENSTGUG00000021308)	ENSTGUG00000021791	CASP9 (ENSTGUG00000017156)	DNAJC16 (ENSTGUG00000017133)	AGMAT (ENSTGUG00000017123)	PINK1 (ENSTGUG00000017113)	CDA (ENSTGUG00000022059)
Common canary	MODERN SPECIES	87										HIPK4 (ENSSCAG00000016289)	PPIH (ENSSCAG00000016294)	YBX1 (ENSSCAG00000016298)	ENSSCAG00000016300	P3H1 (ENSSCAG00000016331)	CLDN19 (ENSSCAG00000016381)	C1orf50 (ENSSCAG00000016384) #22	CDC42 (ENSSCAG00000016389)	WNT4 (ENSSCAG00000016397)	EPHA8 (ENSSCAG00000016406)	C1QA (ENSSCAG00000016412)	C1QC (ENSSCAG00000016414)	C1QB (ENSSCAG00000016420)	LACTBL1 (ENSSCAG00000016427)	EPHB2 (ENSSCAG00000016443)	ENSSCAG00000016473
Medium ground finch	MODERN SPECIES	176											HIPK4 (ENSGFOG00000010418)	PPIH (ENSGFOG00000010408)	YBX1 (ENSGFOG00000010400)	ENSGFOG00000010389	P3H1 (ENSGFOG00000010338)	C1orf50 (ENSGFOG00000010315) #22	CDC42 (ENSGFOG00000010311)	WNT4 (ENSGFOG00000010305)	EPHA8 (ENSGFOG00000010278)	C1QA (ENSGFOG00000010267)	C1QC (ENSGFOG00000010265)	C1QB (ENSGFOG00000010257)	EPHB2 (ENSGFOG00000010250)	LACTBL1 (ENSGFOG00000010243)	ENSGFOG00000010234	EFHD2 (ENSGFOG00000010225)	ENSGFOG00000010098	ENSGFOG00000010038	ENSGFOG00000010014	CASP9 (ENSGFOG00000010001)	DNAJC16 (ENSGFOG00000009964)
Flycatcher	MODERN SPECIES	13	FBXO44 (ENSFALG00000025944)	DRAXIN (ENSFALG00000010100)	FBXO2 (ENSFALG00000028136)	DISP3 (ENSFALG00000010115)	ANGPTL7 (ENSFALG00000010279)	MTOR (ENSFALG00000010184)	EXOSC10 (ENSFALG00000010287)	SRM (ENSFALG00000010293)	ENSFALG00000024127	PPIH (ENSFALG00000010295)	UBIAD1 (ENSFALG00000025209)	YBX1 (ENSFALG00000010305)	ENSFALG00000010324	CLDN19 (ENSFALG00000010331)	P3H1 (ENSFALG00000010338)	C1orf50 (ENSFALG00000024394) #22	CDC42 (ENSFALG00000023168)	WNT4 (ENSFALG00000025820)	EPHA8 (ENSFALG00000010366)	C1QA (ENSFALG00000010398)	C1QC (ENSFALG00000010399)	C1QB (ENSFALG00000010401)	EPHB2 (ENSFALG00000010435)	ENSFALG00000010480	ENSFALG00000010485	ENSFALG00000010496	ENSFALG00000026379	EFHD2 (ENSFALG00000025188)	ENSFALG00000010502	CASP9 (ENSFALG00000010504)	ENSFALG00000010510
Neognathae_c	ANCESTRAL SPECIES	28	ENSGT01030000234528.B.b.b	ENSGT00940000154169.B #23	ENSGT00390000006113 #24	ENSGT00940000158433	ENSGT00940000156275	ENSGT00940000160840	ENSGT00940000156792 #29	ENSGT00390000004248	ENSGT00950000182834.C	ENSGT00940000165031	ENSGT00940000154721	ENSGT00940000153341.b	ENSGT00940000165186.C	ENSGT00940000158624	ENSGT00940000158725	ENSGT00390000003084 #22	ENSGT00940000153675.a.a.b
Kakapo	MODERN SPECIES	10	USP48 (ENSSHBG00005016767)	ENSSHBG00005017039 #23	TRIM62 (ENSSHBG00005017049)	ZNF362 (ENSSHBG00005017064)	PHC2 (ENSSHBG00005017079)	SLC2A1 (ENSSHBG00005017086) #29	ZMYND12 (ENSSHBG00005017097)	ENSSHBG00005000900	PPCS (ENSSHBG00005000910)	ENSSHBG00005000917	PPIH (ENSSHBG00005000923)	YBX1 (ENSSHBG00005000931)	ENSSHBG00005000944	CLDN19 (ENSSHBG00005000953)	P3H1 (ENSSHBG00005005567)	C1orf50 (ENSSHBG00005005599) #22	CDC42 (ENSSHBG00005005621)	WNT4 (ENSSHBG00005005646)	ZBTB40 (ENSSHBG00005005739)	EPHA8 (ENSSHBG00005005763)	ENSSHBG00005005792	C1QA (ENSSHBG00005005809)	C1QC (ENSSHBG00005005829)	C1QB (ENSSHBG00005005839)	EPHB2 (ENSSHBG00005005860)	LACTBL1 (ENSSHBG00005005889)	ENSSHBG00005005906	MIIP (ENSSHBG00005005930)	MFN2 (ENSSHBG00005005954)	PLOD1 (ENSSHBG00005006344)	KIAA2013 (ENSSHBG00005007838)
Golden eagle	MODERN SPECIES	22	SVBP (ENSACCG00020004536) #24	TRIM62 (ENSACCG00020004545)	ZNF362 (ENSACCG00020004561)	PHC2 (ENSACCG00020004574)	ENSACCG00020004585	ENSACCG00020004590	SLC2A1 (ENSACCG00020004602) #29	ZMYND12 (ENSACCG00020004617)	PPCS (ENSACCG00020004623)	ENSACCG00020004665	PPIH (ENSACCG00020004686)	YBX1 (ENSACCG00020004695)	ENSACCG00020010272	CLDN19 (ENSACCG00020010304)	P3H1 (ENSACCG00020010351)	C1orf50 (ENSACCG00020010366) #22	CDC42 (ENSACCG00020010380)	WNT4 (ENSACCG00020010391)	ZBTB40 (ENSACCG00020010404)	EPHA8 (ENSACCG00020010483)	C1QA (ENSACCG00020010525)	C1QC (ENSACCG00020010539)	C1QB (ENSACCG00020010548)	EPHB2 (ENSACCG00020010571)	LACTBL1 (ENSACCG00020010600)	ENSACCG00020010612	ENSACCG00020010625	LSS (ENSACCG00020010640)	S100B (ENSACCG00020010663)	ENSACCG00020010675	DIP2A (ENSACCG00020010702)
Galloanserae	ANCESTRAL SPECIES	24	ENSGT00940000154169.B #23	ENSGT00390000006113 #24	ENSGT00940000158433.k	ENSGT00940000156275	ENSGT00940000160840	ENSGT00940000156792 #29	ENSGT00390000004248	ENSGT00940000169116	ENSGT00950000182834.C	ENSGT00940000165031.c	ENSGT00940000154721	ENSGT00940000153341.b	ENSGT00940000165186.C	ENSGT00940000158624	ENSGT00940000158725	ENSGT00390000003084 #22	ENSGT00940000153675.a.a.b	ENSGT00940000159654	ENSGT00930000151052	ENSGT00940000160469	ENSGT00940000162143	ENSGT00940000161227	ENSGT00940000161091	ENSGT00940000155503	ENSGT00450000040404.a	ENSGT00940000154436.b
Phasianidae	ANCESTRAL SPECIES	23	ENSGT00940000154169.B #23	ENSGT00390000006113 #24	ENSGT00940000158433.k	ENSGT00940000156275	ENSGT00940000160840	ENSGT00940000156792 #29	ENSGT00390000004248	ENSGT00950000182834.C	ENSGT00940000165031.d	ENSGT00940000165031.c	ENSGT00940000154721	ENSGT00940000153341.b	ENSGT00940000165186.C	ENSGT00940000158624	ENSGT00940000158725	ENSGT00390000003084 #22	ENSGT00940000153675.a.a.b	ENSGT00940000153675.a.a.a.b	ENSGT00940000159654	ENSGT00930000151052	ENSGT00940000160469	ENSGT00940000162143	ENSGT00940000161227	ENSGT00940000161091	ENSGT00940000155503	ENSGT00450000040404.a	ENSGT00940000154436.b	ENSGT00940000157931	ENSGT00940000160929	ENSGT00940000159408	ENSGT00940000153395.b
Phasianidae_b	ANCESTRAL SPECIES	33	ENSGT00940000154169.B #23	ENSGT00390000006113 #24	ENSGT00940000158433.k	ENSGT00940000156275	ENSGT00940000160840	ENSGT00940000156792 #29	ENSGT00390000004248	ENSGT00950000182834.C	ENSGT00940000165031.d	ENSGT00940000165031.c	ENSGT00940000154721	ENSGT00940000153341.b	ENSGT00940000165186.C	ENSGT00940000158624	ENSGT00940000158725	ENSGT00390000003084 #22	ENSGT00940000153675.a.a.b	ENSGT00940000159654	ENSGT00930000151052	ENSGT00940000160469	ENSGT00940000162143	ENSGT00940000161227	ENSGT00940000161091	ENSGT00940000155503.c	ENSGT00450000040404.a	ENSGT00940000154436.b	ENSGT00940000157931	ENSGT00940000160929	ENSGT00940000159408	ENSGT00940000153395.b	ENSGT00390000013828
Chicken	MODERN SPECIES	13	SVBP (ENSGALG00010017757) #24	TRIM62 (ENSGALG00010017733)	ZNF362 (ENSGALG00010017704)	PHC2 (ENSGALG00010017685)	ENSGALG00010017674	SLC2A1 (ENSGALG00010017667) #29	ZMYND12 (ENSGALG00010017663)	PPCS (ENSGALG00010017651)	ENSGALG00010017648	ENSGALG00010017639	PPIH (ENSGALG00010017634)	YBX1 (ENSGALG00010017625)	ENSGALG00010016555	CLDN19 (ENSGALG00010021863)	P3H1 (ENSGALG00010021847)	C1orf50 (ENSGALG00010021839) #22	CDC42 (ENSGALG00010021807)	WNT4 (ENSGALG00010016957)	ZBTB40 (ENSGALG00010016942)	EPHA8 (ENSGALG00010016929)	C1QA (ENSGALG00010016920)	C1QC (ENSGALG00010016905)	C1QB (ENSGALG00010016881)	ENSGALG00010016857	EPHB2 (ENSGALG00010016847)	LACTBL1 (ENSGALG00010016828)	GUCA2B (ENSGALG00010016795)	DISP3 (ENSGALG00010016789)	FBXO2 (ENSGALG00010021217)	FBXO44 (ENSGALG00010021213)	MAD2L2 (ENSGALG00010021207)
Turkey	MODERN SPECIES	15	ENSMGAG00000006357	ENSMGAG00000006335	ENSMGAG00000006378	ENSMGAG00000006397	ENSMGAG00000020087	ENSMGAG00000017385	ENSMGAG00000006426	ENSMGAG00000020237	C1QA (ENSMGAG00000006456)	ENSMGAG00000006454	C1QB (ENSMGAG00000006443)	ENSMGAG00000006467	ZBTB40 (ENSMGAG00000006696)	ENSMGAG00000006810	ENSMGAG00000006788	ENSMGAG00000006825 #22	ENSMGAG00000006828	ENSMGAG00000006858	ENSMGAG00000006879	ENSMGAG00000006872	ENSMGAG00000022856	ENSMGAG00000006968	ENSMGAG00000007032	ENSMGAG00000007090	ENSMGAG00000007048 #29	ENSMGAG00000022644	ENSMGAG00000006930	ENSMGAG00000007101	ENSMGAG00000007044 #23	ENSMGAG00000019454	ENSMGAG00000007242
Japanese quail	MODERN SPECIES	13	USP48 (ENSCJPG00005007136)	ENSCJPG00005007107	TRIM62 (ENSCJPG00005007098)	ZNF362 (ENSCJPG00005007094)	PHC2 (ENSCJPG00005007093)	ENSCJPG00005007092	ENSCJPG00005007091	ENSCJPG00005007090	SLC2A1 (ENSCJPG00005007089) #29	ZMYND12 (ENSCJPG00005007088)	PPCS (ENSCJPG00005007087)	PPIH (ENSCJPG00005007086)	YBX1 (ENSCJPG00005007085)	ENSCJPG00005007084	ENSCJPG00005007083	C1orf50 (ENSCJPG00005007082) #22	P3H1 (ENSCJPG00005006857)	CDC42 (ENSCJPG00005006852)	WNT4 (ENSCJPG00005006851)	EPHA8 (ENSCJPG00005006840)	C1QA (ENSCJPG00005006838)	C1QB (ENSCJPG00005006836)	EPHB2 (ENSCJPG00005006826)	LACTBL1 (ENSCJPG00005006822)	ENSCJPG00005006820	DISP3 (ENSCJPG00005006807)	FBXO2 (ENSCJPG00005006780)	FBXO44 (ENSCJPG00005006764)	MAD2L2 (ENSCJPG00005006763)	DRAXIN (ENSCJPG00005006762)	AGTRAP (ENSCJPG00005006761)
Anatidae	ANCESTRAL SPECIES	19	ENSGT00940000154169.B #23	ENSGT00390000006113 #24	ENSGT00940000158433.k	ENSGT00940000156275	ENSGT00940000160840	ENSGT00940000156792 #29	ENSGT00390000004248	ENSGT00940000169116	ENSGT00950000182834.C	ENSGT00940000165031.c	ENSGT00940000154721	ENSGT00940000153341.b	ENSGT00940000165186.C	ENSGT00940000158624	ENSGT00940000158725	ENSGT00390000003084 #22
Pink-footed goose	MODERN SPECIES	389														CLDN19 (ENSABRG00000020650)	P3H1 (ENSABRG00000020593)	C1orf50 (ENSABRG00000020581) #22	CDC42 (ENSABRG00000020577)	WNT4 (ENSABRG00000020573)	ENSABRG00000020544
Duck	MODERN SPECIES	591																C1orf50 (ENSAPLG00000004216) #22
African ostrich	MODERN SPECIES	236								PINK1 (ENSSCUG00000004624)	AGMAT (ENSSCUG00000004626)	DNAJC16 (ENSSCUG00000004631)	CASP9 (ENSSCUG00000004634)	PPIH (ENSSCUG00000004637)	YBX1 (ENSSCUG00000004640)	ENSSCUG00000004644	P3H1 (ENSSCUG00000004658)	C1orf50 (ENSSCUG00000004665) #22	CDC42 (ENSSCUG00000004667)	WNT4 (ENSSCUG00000004672)	ENSSCUG00000004674	ZBTB40 (ENSSCUG00000004686)	EPHA8 (ENSSCUG00000004712)	C1QA (ENSSCUG00000004720)	C1QB (ENSSCUG00000004722)	EPHB2 (ENSSCUG00000004724)	LACTBL1 (ENSSCUG00000004730)
Australian saltwater crocodile	MODERN SPECIES	45	ENSCPRG00005015007	TRIM62 (ENSCPRG00005015003)	ZNF362 (ENSCPRG00005014995)	PHC2 (ENSCPRG00005014990)	ENSCPRG00005014987	SLC2A1 (ENSCPRG00005014978) #29	ZMYND12 (ENSCPRG00005014973)	ENSCPRG00005014970	ENSCPRG00005014955	PPIH (ENSCPRG00005014940)	ENSCPRG00005014938	ENSCPRG00005014933	ENSCPRG00005014927	CLDN19 (ENSCPRG00005014920)	P3H1 (ENSCPRG00005014915)	C1orf50 (ENSCPRG00005014909) #22	CDC42 (ENSCPRG00005014902)	WNT4 (ENSCPRG00005014812)	ZBTB40 (ENSCPRG00005014789)	EPHA8 (ENSCPRG00005014753)	C1QA (ENSCPRG00005014747)	C1QC (ENSCPRG00005014745)	C1QB (ENSCPRG00005014742)	EPHB2 (ENSCPRG00005014740)	LACTBL1 (ENSCPRG00005014734)	ENSCPRG00005014733	ENSCPRG00005014731	DISP3 (ENSCPRG00005014719)	FBXO2 (ENSCPRG00005014718)	FBXO6 (ENSCPRG00005014717)	MAD2L2 (ENSCPRG00005014713)
Cryptodira	ANCESTRAL SPECIES	70	ENSGT00940000158433	ENSGT00940000156275	ENSGT00950000182858.C	ENSGT00940000160840	ENSGT00940000156792 #29	ENSGT00390000004248	ENSGT00940000169116	ENSGT00950000182834.C	ENSGT00940000165031	ENSGT00940000154721	ENSGT00940000153341.b	ENSGT00940000165186.A	ENSGT00940000165186.C	ENSGT00940000158624	ENSGT00940000158725	ENSGT00390000003084 #22
Testudinoidea	ANCESTRAL SPECIES	48	ENSGT00390000006113 #24	ENSGT00940000158433	ENSGT00940000156275	ENSGT00940000160840	ENSGT00940000156792 #29	ENSGT00390000004248	ENSGT00940000169116	ENSGT00950000182834.C	ENSGT00940000165031	ENSGT00940000154721	ENSGT00940000153341.b	ENSGT00940000165186.A	ENSGT00940000165186.C	ENSGT00940000158624	ENSGT00940000158725	ENSGT00390000003084 #22	ENSGT00940000153675.a.a.b	ENSGT00930000151052	ENSGT00940000160469	ENSGT00940000162143	ENSGT00940000161227	ENSGT00940000161091	ENSGT00940000155503	ENSGT00450000040404.a	ENSGT00940000154436.a	ENSGT00940000154436.b	ENSGT00940000156265.x.a.b	ENSGT00940000156265.x.a.a
Emydidae	ANCESTRAL SPECIES	23	ENSGT00940000154169.B #23	ENSGT00390000006113 #24	ENSGT00940000158433	ENSGT00940000156275	ENSGT00940000160840	ENSGT00940000156792 #29	ENSGT00390000004248	ENSGT00950000182834.C	ENSGT00940000165031	ENSGT00940000154721	ENSGT00940000153341.b	ENSGT00940000165186.A	ENSGT00940000165186.C	ENSGT00940000158624	ENSGT00940000158725	ENSGT00390000003084 #22	ENSGT00940000153675.a.a.b	ENSGT00930000151052	ENSGT00940000160469	ENSGT00940000162143	ENSGT00940000161227	ENSGT00940000161091	ENSGT00940000155503	ENSGT00450000040404.a	ENSGT00940000154436.a	ENSGT00940000154436.b	ENSGT00940000156265.x.a.a	ENSGT00940000156265.x.a.b	ENSGT00940000158776	ENSGT00390000017294	ENSGT00950000182999.a
Three-toed box turtle	MODERN SPECIES	345	ENSTMTG00000022482	ENSTMTG00000022478 #23	SVBP (ENSTMTG00000022475) #24	TRIM62 (ENSTMTG00000022474)	ZNF362 (ENSTMTG00000022470)	PHC2 (ENSTMTG00000022460)	SLC2A1 (ENSTMTG00000022454) #29	ZMYND12 (ENSTMTG00000022447)	PPCS (ENSTMTG00000022440)	ENSTMTG00000022430	PPIH (ENSTMTG00000022424)	ENSTMTG00000022418	ENSTMTG00000022415	CLDN19 (ENSTMTG00000022409)	P3H1 (ENSTMTG00000022403)	C1orf50 (ENSTMTG00000022400) #22	CDC42 (ENSTMTG00000022399)	WNT4 (ENSTMTG00000022395)	ZBTB40 (ENSTMTG00000022377)	EPHA8 (ENSTMTG00000022349)	C1QA (ENSTMTG00000022336)	C1QC (ENSTMTG00000022333)	C1QB (ENSTMTG00000022329)	EPHB2 (ENSTMTG00000022322)	LACTBL1 (ENSTMTG00000022317)	GUCA2A (ENSTMTG00000022312)	GUCA2B (ENSTMTG00000022310)	ENSTMTG00000022308	ENSTMTG00000022296	KIF17 (ENSTMTG00000022291)	DDOST (ENSTMTG00000022287)
painted turtle	MODERN SPECIES	728	ENSCPBG00000008851	ALPL (ENSCPBG00000008863)	ECE1 (ENSCPBG00000008882)	EIF4G3 (ENSCPBG00000008943)	HP1BP3 (ENSCPBG00000009787)	SLC2A1 (ENSCPBG00000009801) #29	ZMYND12 (ENSCPBG00000009809)	PPCS (ENSCPBG00000009814)	ENSCPBG00000009819	PPIH (ENSCPBG00000009847)	ENSCPBG00000009853	ENSCPBG00000009856	ENSCPBG00000009865	CLDN19 (ENSCPBG00000009915)	P3H1 (ENSCPBG00000009965)	C1orf50 (ENSCPBG00000010312) #22	CDC42 (ENSCPBG00000010314)	WNT4 (ENSCPBG00000010322)	ZBTB40 (ENSCPBG00000010333)	EPHA8 (ENSCPBG00000010342)	C1QA (ENSCPBG00000010349)	C1QC (ENSCPBG00000010352)	C1QB (ENSCPBG00000010357)	EPHB2 (ENSCPBG00000010362)	LACTBL1 (ENSCPBG00000010375)	GUCA2A (ENSCPBG00000010381)	ENSCPBG00000010384	ENSCPBG00000010387	ENSCPBG00000010397	DDOST (ENSCPBG00000010418)	ENSCPBG00000010425
Testudinidae	ANCESTRAL SPECIES	22	ENSGT00940000154169.B #23	ENSGT00390000006113 #24	ENSGT00940000158433	ENSGT00940000156275	ENSGT00940000160840	ENSGT00940000156792 #29	ENSGT00390000004248	ENSGT00940000169116	ENSGT00950000182834.C	ENSGT00940000165031	ENSGT00940000154721	ENSGT00940000153341.b	ENSGT00940000165186.C	ENSGT00940000158624	ENSGT00940000158725	ENSGT00390000003084 #22	ENSGT00940000153675.a.a.b	ENSGT00940000159654	ENSGT00930000151052	ENSGT00940000160469	ENSGT00940000162143	ENSGT00940000161227	ENSGT00940000161091	ENSGT00940000155503	ENSGT00450000040404.a	ENSGT01000000218068	ENSGT00940000156265.x.a.b	ENSGT00940000156265.x.a.a	ENSGT00940000158776	ENSGT00390000017294	ENSGT00950000182999.a
Goode s thornscrub tortoise	MODERN SPECIES	9	ENSGEVG00005017592	ENSGEVG00005017631 #23	SVBP (ENSGEVG00005017651) #24	TRIM62 (ENSGEVG00005017666)	ZNF362 (ENSGEVG00005017700)	PHC2 (ENSGEVG00005017723)	ENSGEVG00005017744	SLC2A1 (ENSGEVG00005017755) #29	ZMYND12 (ENSGEVG00005017810)	PPCS (ENSGEVG00005017979)	PPIH (ENSGEVG00005017999)	ENSGEVG00005018031	ENSGEVG00005018059	CLDN19 (ENSGEVG00005018105)	P3H1 (ENSGEVG00005018304)	C1orf50 (ENSGEVG00005018825) #22	CDC42 (ENSGEVG00005018838)	WNT4 (ENSGEVG00005018851)	ZBTB40 (ENSGEVG00005018873)	EPHA8 (ENSGEVG00005018910)	ENSGEVG00005018927	ENSGEVG00005018934	C1QA (ENSGEVG00005018940)	C1QC (ENSGEVG00005018946)	C1QB (ENSGEVG00005018954)	EPHB2 (ENSGEVG00005019015)	LACTBL1 (ENSGEVG00005019194)	ENSGEVG00005019214	ENSGEVG00005019221	ENSGEVG00005019236	ENSGEVG00005019247
Abingdon island giant tortoise	MODERN SPECIES	2609													ENSCABG00000006368	CLDN19 (ENSCABG00000006371)	P3H1 (ENSCABG00000006394)	C1orf50 (ENSCABG00000006799) #22	CDC42 (ENSCABG00000006803)	WNT4 (ENSCABG00000006807)
Anura	ANCESTRAL SPECIES	14	ENSGT01060000248581.A.c	ENSGT00390000009278	ENSGT00390000012058.c.b	ENSGT00940000160362	ENSGT00390000014577.b	ENSGT00390000004248	ENSGT00950000182834.C	ENSGT00500000044947	ENSGT00940000165031	ENSGT00940000154721	ENSGT00940000153341.b	ENSGT00940000165186.A	ENSGT00940000165186.C	ENSGT00940000158624	ENSGT00940000158725	ENSGT00390000003084 #22	ENSGT00530000064721	ENSGT00940000153675.a.b	ENSGT00940000153675.a.a.a.b	ENSGT00940000159654	ENSGT00930000151052	ENSGT00940000158895.b	ENSGT00940000158035	ENSGT01100000265027	ENSGT01010000222360.B	ENSGT00940000162229	ENSGT00940000160300	ENSGT00940000156173	ENSGT00940000162685	ENSGT00940000168348	ENSGT00940000156199.b
Frog	MODERN SPECIES	7	foxj3 (ENSXETG00000013466)	rimkla (ENSXETG00000013464)	zmynd12 (ENSXETG00000013463)	ppcs (ENSXETG00000013461)	ENSXETG00000042160	ENSXETG00000013442	ENSXETG00000044460	utp3 (ENSXETG00000026859)	ppih (ENSXETG00000013439)	ybx1 (ENSXETG00000013436)	ENSXETG00000004751	cldn19 (ENSXETG00000038018)	ENSXETG00000044521	p3h1 (ENSXETG00000004746)	spout1 (ENSXETG00000004745)	c1orf50 (ENSXETG00000012074) #22	ap5b1 (ENSXETG00000004744)	cdc42 (ENSXETG00000004743)	wnt4 (ENSXETG00000004742)	zbtb40 (ENSXETG00000004737)	ENSXETG00000039642	ENSXETG00000039423	ilvbl (ENSXETG00000004732)	XB5846730 [provisional:nnmt] (ENSXETG00000043987)	ENSXETG00000042181	ENSXETG00000047340	ENSXETG00000001042	ENSXETG00000030249	znf177 (ENSXETG00000040989)	ENSXETG00000001040	ENSXETG00000036024
Leishan spiny toad	MODERN SPECIES	2	KAZN (ENSLLEG00000013068)	ENSLLEG00000013006	ENSLLEG00000012943	FOXJ3 (ENSLLEG00000012855)	RIMKLA (ENSLLEG00000012765)	ZMYND12 (ENSLLEG00000012709)	PPCS (ENSLLEG00000012679)	ENSLLEG00000012577	ENSLLEG00000012165	PPIH (ENSLLEG00000011873)	ENSLLEG00000011763	ENSLLEG00000011720	ENSLLEG00000011666	CLDN19 (ENSLLEG00000011614)	P3H1 (ENSLLEG00000011531)	C1orf50 (ENSLLEG00000011473) #22	ENSLLEG00000011433	CDC42 (ENSLLEG00000011292)	WNT4 (ENSLLEG00000011168)	ENSLLEG00000011107	ZBTB40 (ENSLLEG00000010994)	ENSLLEG00000010953	ENSLLEG00000010925	ILVBL (ENSLLEG00000010446)	ENSLLEG00000010410	ENSLLEG00000010314	ENSLLEG00000010287	ENSLLEG00000010233	ENSLLEG00000010064	ENSLLEG00000010007	ENSLLEG00000009869