Gnathostomata ANCESTRAL SPECIES ENSGT00870000136537 #22 Euteleostomi ANCESTRAL SPECIES 419 ENSGT00940000159172 #20 ENSGT00940000160276 #21 ENSGT00870000136537 #22 ENSGT00950000182940.b.a.b #23 ENSGT00510000048165 #24 ENSGT00940000165753 ENSGT00950000183112.b.b ENSGT00940000158522 ENSGT00390000012355.B.b Sarcopterygii ANCESTRAL SPECIES 407 ENSGT00940000159172 #20 ENSGT00940000160276 #21 ENSGT00870000136537 #22 ENSGT00950000182940.b.a.b #23 ENSGT00510000048165 #24 ENSGT00940000165753 ENSGT00950000183112.b.b ENSGT00940000158522 ENSGT00940000165856 Tetrapoda ANCESTRAL SPECIES 190 ENSGT00950000182907.a.a #17 ENSGT00530000063760.b #18 ENSGT00550000075028 #19 ENSGT00940000159172 #20 ENSGT00940000160276 #21 ENSGT00870000136537 #22 ENSGT00950000182940.b.a.b #23 ENSGT00510000048165 #24 ENSGT00940000165753 ENSGT00950000183112.b.b ENSGT00940000158522 ENSGT00940000165856 Amniota ANCESTRAL SPECIES 28 ENSGT00940000161136 ENSGT00390000006215 #7 ENSGT00940000154969.a ENSGT00950000183094.a #9 ENSGT00390000011497 #11 ENSGT00940000171776 ENSGT00500000045038 #12 ENSGT00390000018360 #13 ENSGT00940000156893 #16 ENSGT00390000002049.c.a #15 ENSGT00950000182907.a.a #17 ENSGT00530000063760.b #18 ENSGT00550000075028 #19 ENSGT00940000159172 #20 ENSGT00940000160276 #21 ENSGT00870000136537 #22 ENSGT00950000182940.b.a.b #23 ENSGT00510000048165 #24 ENSGT00940000165753 ENSGT00950000183112.b.b ENSGT00940000158522 ENSGT01060000248645 ENSGT00390000012355.B.b ENSGT00390000005869.a ENSGT00390000014273.b ENSGT00950000185785 ENSGT00940000164158.A ENSGT00940000164422 ENSGT00940000158423 ENSGT00940000157203 ENSGT00390000002799 Mammalia ANCESTRAL SPECIES 25 ENSGT00940000161136 ENSGT00390000006215 #7 ENSGT00940000161600 #8 ENSGT00950000183094.a #9 ENSGT00390000011497 #11 ENSGT00500000045038 #12 ENSGT00390000018360 #13 ENSGT00940000164936 ENSGT00390000002049.c.a #15 ENSGT00940000156893 #16 ENSGT00950000182907.a.a #17 ENSGT00530000063760.b #18 ENSGT00550000075028 #19 ENSGT00940000159172 #20 ENSGT00940000160276 #21 ENSGT00870000136537 #22 ENSGT00950000182940.b.a.b #23 ENSGT00510000048165 #24 ENSGT00950000183112.b.b ENSGT00940000158522 ENSGT01060000248645 ENSGT00390000012355.B.b ENSGT00390000005869.a ENSGT00390000014273.b ENSGT00940000158423 ENSGT00530000063074.a ENSGT01030000234539.a.a.b.a.a ENSGT00390000013847 ENSGT00390000002799 ENSGT00940000157203 ENSGT01030000234540.B.b Theria ANCESTRAL SPECIES 3 ENSGT01090000260003.a.b.b.a.a.a.b.b ENSGT00940000161136 ENSGT00390000006215 #7 ENSGT00940000161600 #8 ENSGT00950000183094.a #9 ENSGT00390000011497 #11 ENSGT00500000045038 #12 ENSGT00390000018360 #13 ENSGT00390000002049.c.a #15 ENSGT00940000156893 #16 ENSGT00950000182907.a.a #17 ENSGT00530000063760.b #18 ENSGT00550000075028 #19 ENSGT00940000159172 #20 ENSGT00940000160276 #21 ENSGT00870000136537 #22 ENSGT00950000182940.b.a.b #23 ENSGT00510000048165 #24 ENSGT00940000153118.db.a.a.b.a.b #25 ENSGT00950000183112.b.b ENSGT00940000158522 ENSGT01060000248645 ENSGT00390000012355.B.b ENSGT00390000005869.a ENSGT00730000111185 ENSGT01050000244841.A.a.b ENSGT00390000014273.b ENSGT00940000158423 ENSGT00530000063074.a ENSGT01030000234539.a.a.b.a.a ENSGT00390000013847 Eutheria ANCESTRAL SPECIES ENSGT00940000161136 ENSGT00390000006215 #7 ENSGT00940000161600 #8 ENSGT00950000183094.a #9 ENSGT00390000011497 #11 ENSGT00500000045038 #12 ENSGT00390000018360 #13 ENSGT00390000003103 #14 ENSGT00390000002049.c.a #15 ENSGT00940000156893 #16 ENSGT00950000182907.a.a #17 ENSGT00530000063760.b #18 ENSGT00550000075028 #19 ENSGT00940000159172 #20 ENSGT00940000160276 #21 ENSGT00870000136537 #22 ENSGT00950000182940.b.a.b #23 ENSGT00510000048165 #24 ENSGT00940000153118.db.a.a.b.a.b #25 ENSGT00940000153118.db.a.a.b.a.a #26 ENSGT01100000263506.a.e.a.b ##36 ENSGT01020000230360.c.b.a.b.b.d ENSGT01100000263474.a.a.d ENSGT01100000263474.a.a.c.b ENSGT00940000161385 ENSGT00950000183112.b.b ENSGT00940000158522 ENSGT01060000248645 ENSGT00390000012355.B.b ENSGT00390000005869.a ENSGT00730000111185 Boreoeutheria ANCESTRAL SPECIES ENSGT00940000161136 ENSGT00390000006215 #7 ENSGT00940000161600 #8 ENSGT00950000183094.a #9 ENSGT00390000011497 #11 ENSGT00500000045038 #12 ENSGT00390000018360 #13 ENSGT00390000003103 #14 ENSGT00390000002049.c.a #15 ENSGT00940000156893 #16 ENSGT00950000182907.a.a #17 ENSGT00530000063760.b #18 ENSGT00550000075028 #19 ENSGT00940000159172 #20 ENSGT00940000160276 #21 ENSGT00870000136537 #22 ENSGT00950000182940.b.a.b #23 ENSGT00510000048165 #24 ENSGT00940000153118.db.a.a.b.a.b #25 ENSGT00940000153118.db.a.a.b.a.a #26 ENSGT01100000263575.A #31 ENSGT00940000153092.a.a.c.a.a ENSGT01100000263559.A.f ##35 ENSGT01100000263506.a.e.b #36 ENSGT01050000244808.A.b.b.a #37 ENSGT00950000183190.a.b.a.b ENSGT00420000029746.f ENSGT00950000183112.b.b ENSGT00940000158522 ENSGT01060000248645 ENSGT00390000012355.B.b Laurasiatheria ANCESTRAL SPECIES ENSGT00940000161136 ENSGT00390000006215 #7 ENSGT00940000161600 #8 ENSGT00950000183094.a #9 ENSGT00390000011497 #11 ENSGT00500000045038 #12 ENSGT00390000018360 #13 ENSGT00390000003103 #14 ENSGT00390000002049.c.a #15 ENSGT00940000156893 #16 ENSGT00950000182907.a.a #17 ENSGT00530000063760.b #18 ENSGT00550000075028 #19 ENSGT00940000159172 #20 ENSGT00940000160276 #21 ENSGT00870000136537 #22 ENSGT00950000182940.b.a.b #23 ENSGT00510000048165 #24 ENSGT00940000153118.db.a.a.b.a.b #25 ENSGT00940000153118.db.a.a.b.a.a #26 ENSGT01100000263575.B.u #29 ENSGT01100000263504.a.b.b.b.a.b ENSGT01100000263506.a.e.a.a.b.a ##36 ENSGT00940000153092.a.a.c.a.a ENSGT01100000263514.A.e.a.b.a.b.a.a.a.b.a.b ENSGT00940000153125.C ENSGT01100000263506.a.e.a.a.a.a.b.b ##36 ENSGT00990000203553.c.a.a.a.b ENSGT01100000263514.A.e.a.b.a.b.a.a.a.a ENSGT00940000153092.a.a.c.a.b ENSGT01100000263575.A #31 Laurasiatheria_a ANCESTRAL SPECIES ENSGT00940000161136 ENSGT00390000006215 #7 ENSGT00940000161600 #8 ENSGT00950000183094.a #9 ENSGT00390000011497 #11 ENSGT00500000045038 #12 ENSGT00390000018360 #13 ENSGT00390000003103 #14 ENSGT00390000002049.c.a #15 ENSGT00940000156893 #16 ENSGT00950000182907.a.a #17 ENSGT00530000063760.b #18 ENSGT00550000075028 #19 ENSGT00940000159172 #20 ENSGT00940000160276 #21 ENSGT00870000136537 #22 ENSGT00950000182940.b.a.b #23 ENSGT00510000048165 #24 ENSGT00940000153118.db.a.a.b.a.b #25 ENSGT00940000153118.db.a.a.b.a.a #26 ENSGT01100000263575.A #31 ENSGT00940000153092.a.a.c.a.b ENSGT01100000263514.A.e.a.b.a.b.a.a.a.a ENSGT00990000203553.c.a.a.a.b ENSGT01100000263575.B.u #29 ENSGT00940000156302 #30 ENSGT01100000263559.B #35 ENSGT01100000263569.a.b.b ENSGT00940000164494 ENSGT01060000248528.a.b.a.a.a.b ##34 ENSGT01100000263559.A.f ##35 Laurasiatheria_b ANCESTRAL SPECIES ENSGT00940000161136 ENSGT00390000006215 #7 ENSGT00940000161600 #8 ENSGT00950000183094.a #9 ENSGT00390000011497 #11 ENSGT00500000045038 #12 ENSGT00390000018360 #13 ENSGT00390000003103 #14 ENSGT00390000002049.c.a #15 ENSGT00940000156893 #16 ENSGT00950000182907.a.a #17 ENSGT00530000063760.b #18 ENSGT00550000075028 #19 ENSGT00940000159172 #20 ENSGT00940000160276 #21 ENSGT00870000136537 #22 ENSGT00950000182940.b.a.b #23 ENSGT00510000048165 #24 ENSGT00940000153118.db.a.a.b.a.b #25 ENSGT00940000153118.db.a.a.b.a.a #26 ENSGT01100000263575.A #31 ENSGT00940000153092.a.a.c.a.b ENSGT01100000263504.a.b.b.b.b ENSGT00990000203553.c.a.b ENSGT01100000263506.a.e.a.a.a.b.a.a.a ##36 ENSGT01060000248528.b.jh.b ##34 ENSGT00940000155501.a.b ENSGT01100000263514.A.e.a.b.a.b.a.a.b ENSGT01100000263514.A.e.a.b.b ENSGT01100000263514.A.e.a.b.a.b.a.a.a.b.a.a.a.a ENSGT00940000153092.a.a.c.a.a Carnivora ANCESTRAL SPECIES 1 ENSGT00940000161136 ENSGT00390000006215 #7 ENSGT00940000161600 #8 ENSGT00950000183094.a #9 ENSGT00390000011497 #11 ENSGT00500000045038 #12 ENSGT00390000018360 #13 ENSGT00390000003103 #14 ENSGT00390000002049.c.a #15 ENSGT00940000156893 #16 ENSGT00950000182907.a.a #17 ENSGT00530000063760.b #18 ENSGT00550000075028 #19 ENSGT00940000159172 #20 ENSGT00940000160276 #21 ENSGT00870000136537 #22 ENSGT00950000182940.b.a.b #23 ENSGT00510000048165 #24 ENSGT00940000153118.db.a.a.b.a.b #25 ENSGT00940000153118.db.a.a.b.a.a #26 ENSGT01100000263575.A #31 ENSGT00940000153092.a.a.c.a.b ENSGT01100000263575.B.u #29 ENSGT00940000156302 #30 ENSGT01100000263559.A.f ##35 ENSGT01100000263506.a.e.b #36 ENSGT01050000244808.A.b.b.a #37 ENSGT00950000183190.a.b.a.b ENSGT00420000029746.f ENSGT00950000183112.b.b ENSGT00940000158522 Felidae ANCESTRAL SPECIES 10 ENSGT00940000161136 ENSGT00390000006215 #7 ENSGT00940000161600 #8 ENSGT00950000183094.a #9 ENSGT00390000011497 #11 ENSGT00500000045038.n #12 ENSGT00390000018360 #13 ENSGT00390000003103 #14 ENSGT00390000002049.c.a #15 ENSGT00940000156893 #16 ENSGT00950000182907.a.a #17 ENSGT00530000063760.b #18 ENSGT00550000075028 #19 ENSGT00940000159172 #20 ENSGT00940000160276 #21 ENSGT00870000136537 #22 ENSGT00950000182940.b.a.b #23 ENSGT00510000048165 #24 ENSGT00940000153118.db.a.a.b.a.b #25 ENSGT00940000153118.db.a.a.b.a.a #26 ENSGT01100000263575.B.u #29 ENSGT00940000156302 #30 ENSGT01100000263575.A #31 ENSGT00940000153092.a.a.c.a.a ENSGT01100000263514.A.e.a.b.a.b.a.a.a.b.a.a.a.a ENSGT01100000263506.a.e.a.a.a.b.a.a.b.a.b.a.a.a ##36 ENSGT00940000153092.a.b.f ENSGT00940000155501.a.a ENSGT01100000263474.a.b.b.e.a.a.b ENSGT01100000263506.a.e.a.a.a.b.a.a.b.a.a ##36 ENSGT00940000153118.db.a.b ##25 Panthera ANCESTRAL SPECIES 40 ENSGT00940000161136 ENSGT00390000006215 #7 ENSGT00940000161600 #8 ENSGT00950000183094.a #9 ENSGT00390000011497 #11 ENSGT00500000045038.n.a #12 ENSGT00390000018360 #13 ENSGT00390000003103 #14 ENSGT00390000002049.c.a #15 ENSGT00940000156893 #16 ENSGT00950000182907.a.a #17 ENSGT00530000063760.b #18 ENSGT00550000075028 #19 ENSGT00940000159172 #20 ENSGT00940000160276 #21 ENSGT00870000136537 #22 ENSGT00950000182940.b.a.b #23 ENSGT00510000048165 #24 ENSGT00940000153118.db.a.a.b.a.b #25 ENSGT00940000153118.db.a.a.b.a.a #26 ENSGT01100000263575.B.u #29 ENSGT01060000248528.b.jh.b ##34 ENSGT01100000263559.A.f ##35 ENSGT01100000263506.a.e.b #36 ENSGT01050000244808.A.b.b.a #37 ENSGT00390000016972.a.b.b ENSGT00950000183190.a.b.a.b ENSGT00420000029746.f Panthera_a ANCESTRAL SPECIES 38 ENSGT00940000161136 ENSGT00390000006215 #7 ENSGT00940000161600 #8 ENSGT00950000183094.a #9 ENSGT00390000011497 #11 ENSGT00500000045038.n.a #12 ENSGT00390000018360 #13 ENSGT00390000003103 #14 ENSGT00390000002049.c.a #15 ENSGT00940000156893 #16 ENSGT00950000182907.a.a #17 ENSGT00530000063760.b #18 ENSGT00550000075028 #19 ENSGT00940000159172 #20 ENSGT00940000160276 #21 ENSGT00870000136537 #22 ENSGT00950000182940.b.a.b #23 ENSGT00510000048165 #24 ENSGT00940000153118.db.a.a.b.a.b #25 ENSGT00940000153118.db.a.a.b.a.a #26 ENSGT01100000263575.B.u #29 ENSGT00950000183112.b.b ENSGT00940000158522 ENSGT01060000248645 ENSGT00390000012355.B.b ENSGT00390000005869.a ENSGT00730000111185 ENSGT00910000145379 ENSGT00390000014273.b ENSGT00940000158423 ENSGT00530000063074.a leopard MODERN SPECIES 149 ECM1 (ENSPPRG00000013966) #7 TARS2 (ENSPPRG00000019975) #8 RPRD2 (ENSPPRG00000000487) #9 ENSPPRG00000000561 #10 PRPF3 (ENSPPRG00000000731) #11 ENSPPRG00000000903 #12 CIART (ENSPPRG00000001098) #13 C1orf54 (ENSPPRG00000001580) #14 APH1A (ENSPPRG00000002030) #15 CA14 (ENSPPRG00000002165) #16 ANP32E (ENSPPRG00000003660) #17 PLEKHO1 (ENSPPRG00000004031) #18 VPS45 (ENSPPRG00000005479) #19 OTUD7B (ENSPPRG00000005622) #20 MTMR11 (ENSPPRG00000007153) #21 SF3B4 (ENSPPRG00000007384) #22 SV2A (ENSPPRG00000007971) #23 BOLA1 (ENSPPRG00000016802) #24 H2AC21 (ENSPPRG00000016850) #25 ENSPPRG00000016865 #26 ENSPPRG00000016879 #27 H2AC20 (ENSPPRG00000016889) #28 H2BC21 (ENSPPRG00000016907) #29 H2AC19 (ENSPPRG00000016923) #30 ENSPPRG00000017082 #31 ENSPPRG00000017282 #32 ENSPPRG00000017308 #33 ENSPPRG00000017324 #34 H3C13 (ENSPPRG00000017364) #35 H2BC18 (ENSPPRG00000011510) #36 FCGR1A (ENSPPRG00000012934) #37 lion MODERN SPECIES 8 ADAMTSL4 (ENSPLOG00000019514) ECM1 (ENSPLOG00000019469) #7 TARS2 (ENSPLOG00000019042) #8 RPRD2 (ENSPLOG00000018951) #9 PRPF3 (ENSPLOG00000018919) #11 ENSPLOG00000018890 #12 CIART (ENSPLOG00000018806) #13 C1orf54 (ENSPLOG00000018755) #14 APH1A (ENSPLOG00000018596) #15 CA14 (ENSPLOG00000018473) #16 ANP32E (ENSPLOG00000018252) #17 PLEKHO1 (ENSPLOG00000018167) #18 VPS45 (ENSPLOG00000017939) #19 OTUD7B (ENSPLOG00000017898) #20 MTMR11 (ENSPLOG00000017771) #21 SF3B4 (ENSPLOG00000017698) #22 SV2A (ENSPLOG00000017521) #23 BOLA1 (ENSPLOG00000017492) #24 H2AC21 (ENSPLOG00000017476) #25 H2AC20 (ENSPLOG00000017459) #26 ENSPLOG00000017448 #29 HJV (ENSPLOG00000017362) TXNIP (ENSPLOG00000017292) ENSPLOG00000017238 ENSPLOG00000017202 LIX1L (ENSPLOG00000017177) RBM8A (ENSPLOG00000017084) PEX11B (ENSPLOG00000017016) ITGA10 (ENSPLOG00000016554) ANKRD35 (ENSPLOG00000016395) PIAS3 (ENSPLOG00000016111) Tiger MODERN SPECIES 275 ADAMTSL4 (ENSPTIG00000015181) ECM1 (ENSPTIG00000012717) #7 TARS2 (ENSPTIG00000008079) #8 RPRD2 (ENSPTIG00000006304) #9 PRPF3 (ENSPTIG00000005516) #11 ENSPTIG00000003850 #12 CIART (ENSPTIG00000000357) #13 C1orf54 (ENSPTIG00000021455) #14 APH1A (ENSPTIG00000021060) #15 CA14 (ENSPTIG00000020798) #16 ANP32E (ENSPTIG00000019676) #17 PLEKHO1 (ENSPTIG00000018948) #18 VPS45 (ENSPTIG00000018151) #19 OTUD7B (ENSPTIG00000017376) #20 MTMR11 (ENSPTIG00000014650) #21 SF3B4 (ENSPTIG00000014530) #22 SV2A (ENSPTIG00000013557) #23 BOLA1 (ENSPTIG00000004599) #24 H2AC21 (ENSPTIG00000004596) #25 ENSPTIG00000004585 #29 ENSPTIG00000011928 ENSPTIG00000004051 #29 ENSPTIG00000004012 ##34 H2BC18 (ENSPTIG00000009410) #36 FCGR1A (ENSPTIG00000009323) #37 ENSPTIG00000003933 ENSPTIG00000008412 ENSPTIG00000007301 Cat MODERN SPECIES 239 ECM1 (ENSFCAG00000027224) #7 TARS2 (ENSFCAG00000001702) #8 MCL1 (ENSFCAG00000030278) RPRD2 (ENSFCAG00000030083) #9 PRPF3 (ENSFCAG00000013940) #11 ENSFCAG00000034082 #12 CIART (ENSFCAG00000013937) #13 CC1H1orf54 (ENSFCAG00000013939) #14 CA14 (ENSFCAG00000013934) #16 APH1A (ENSFCAG00000030589) #15 ANP32E (ENSFCAG00000022278) #17 PLEKHO1 (ENSFCAG00000035563) #18 VPS45 (ENSFCAG00000010112) #19 OTUD7B (ENSFCAG00000010110) #20 MTMR11 (ENSFCAG00000010108) #21 SF3B4 (ENSFCAG00000010106) #22 ENSFCAG00000051403 SV2A (ENSFCAG00000010104) #23 H2BC19 (ENSFCAG00000044074) ##36 ENSFCAG00000047792 ##35 H4C14 (ENSFCAG00000023368) ##34 H3C13 (ENSFCAG00000045408) ##35 H2BC18 (ENSFCAG00000046241) #36 FCGR1A (ENSFCAG00000027331) #37 ENSFCAG00000044482 ENSFCAG00000025610 ENSFCAG00000031642 HJV (ENSFCAG00000043881) TXNIP (ENSFCAG00000029919) POLR3GL (ENSFCAG00000005410) ANKRD34A (ENSFCAG00000002723) Caniformia ANCESTRAL SPECIES 31 ENSGT00940000161136 ENSGT00390000006215 #7 ENSGT00940000161600 #8 ENSGT00950000183094.a #9 ENSGT00390000011497 #11 ENSGT00500000045038 #12 ENSGT00390000018360 #13 ENSGT00390000003103 #14 ENSGT00390000002049.c.a #15 ENSGT00940000156893 #16 ENSGT00950000182907.a.a #17 ENSGT00530000063760.b #18 ENSGT00550000075028 #19 ENSGT00940000159172 #20 ENSGT00940000160276 #21 ENSGT00870000136537 #22 ENSGT00950000182940.b.a.b #23 ENSGT00510000048165 #24 ENSGT00940000153118.db.a.a.b.a.b #25 ENSGT00940000153118.db.a.a.b.a.a #26 ENSGT01100000263575.B.u #29 ENSGT01060000248528.b.kh.yb.c.a ##34 ENSGT01100000263559.A.f ##35 ENSGT01060000248528.b.jh.a.b ##34 ENSGT01100000263559.B #35 ENSGT01100000263506.a.e.b #36 ENSGT01050000244808.A.b.b.a #37 ENSGT00950000183190.a.b.a.b ENSGT00420000029746.f ENSGT00950000183112.b.b ENSGT00940000158522 Caniformia_b ANCESTRAL SPECIES 35 ENSGT00940000161136 ENSGT00390000006215 #7 ENSGT00940000161600 #8 ENSGT00950000183094.a #9 ENSGT00390000011497 #11 ENSGT00500000045038 #12 ENSGT00390000018360 #13 ENSGT00390000003103 #14 ENSGT00390000002049.c.a #15 ENSGT00940000156893 #16 ENSGT00950000182907.a.a #17 ENSGT00530000063760.b #18 ENSGT00550000075028 #19 ENSGT00940000159172 #20 ENSGT00940000160276 #21 ENSGT00870000136537 #22 ENSGT00950000182940.b.a.b #23 ENSGT00510000048165 #24 ENSGT00940000153118.db.a.a.b.a.b #25 ENSGT00940000153118.db.a.a.b.a.a #26 ENSGT01100000263575.B.u #29 ENSGT01100000263559.A.f ##35 ENSGT00940000156302 #30 ENSGT01100000263506.a.e.a.a.a.a.b.a ##36 ENSGT01060000248528.b.jh.a.b ##34 ENSGT01100000263559.B #35 ENSGT01100000263506.a.e.b #36 ENSGT01050000244808.A.b.b.a #37 ENSGT00950000183190.a.b.a.b ENSGT00420000029746.f ENSGT00950000183112.b.b Ursidae ANCESTRAL SPECIES ENSGT00940000161136 ENSGT00390000006215 #7 ENSGT00940000161600 #8 ENSGT00950000183094.a #9 ENSGT00390000011497 #11 ENSGT00500000045038 #12 ENSGT00390000018360 #13 ENSGT00390000003103 #14 ENSGT00390000002049.c.a #15 ENSGT00940000156893 #16 ENSGT00950000182907.a.a.a.b #17 ENSGT00530000063760.b #18 ENSGT00550000075028 #19 ENSGT00940000159172 #20 ENSGT00940000160276 #21 ENSGT00870000136537 #22 ENSGT00950000182940.b.a.b #23 ENSGT00510000048165 #24 ENSGT00940000153118.db.a.a.b.a.b #25 ENSGT00940000153118.db.a.a.b.a.a #26 ENSGT01100000263575.B.u #29 ENSGT01100000263575.A #31 ENSGT01060000248528.b.jh.a.b ##34 ENSGT01100000263559.B #35 ENSGT01100000263506.a.e.b #36 ENSGT01050000244808.A.b.b.a #37 ENSGT00950000183190.a.b.a.b ENSGT00420000029746.f ENSGT00950000183112.b.b ENSGT00940000158522 ENSGT01100000263883 Ursus ANCESTRAL SPECIES 18 ENSGT00940000161136 ENSGT00390000006215 #7 ENSGT00940000161600 #8 ENSGT00950000183094.a #9 ENSGT00390000011497 #11 ENSGT00500000045038 #12 ENSGT00390000018360 #13 ENSGT00390000003103 #14 ENSGT00390000002049.c.a #15 ENSGT00940000156893 #16 ENSGT00950000182907.a.a.a.b #17 ENSGT00530000063760.b #18 ENSGT00550000075028 #19 ENSGT00940000159172 #20 ENSGT00940000160276 #21 ENSGT00870000136537 #22 ENSGT00950000182940.b.a.b #23 ENSGT00510000048165 #24 ENSGT00940000153118.db.a.a.b.a.a #26 ENSGT01100000263575.A #31 ENSGT00940000153118.db.a.a.b.a.b #25 ENSGT01100000263575.B.u #29 ENSGT00940000156302 #30 ENSGT01100000263504.a.b.b.b.a.b ENSGT01100000263506.a.e.a.a.a.b.b.b ##36 ENSGT00940000153118.db.a.a.a.a ##25 ENSGT00940000153125.B ENSGT01100000263506.a.e.a.a.a.a.b.b ##36 ENSGT01100000263506.a.e.a.a.a.a.a ##36 ENSGT00940000153125.E.c.b ENSGT01100000263567.a.a American black bear MODERN SPECIES 234 ANP32E (ENSUAMG00000022462) #17 PLEKHO1 (ENSUAMG00000022464) #18 VPS45 (ENSUAMG00000022465) #19 OTUD7B (ENSUAMG00000022466) #20 MTMR11 (ENSUAMG00000022467) #21 SF3B4 (ENSUAMG00000022468) #22 SV2A (ENSUAMG00000022469) #23 BOLA1 (ENSUAMG00000022470) #24 ENSUAMG00000022471 #26 H2AC21 (ENSUAMG00000022472) #25 ENSUAMG00000022473 #29 ENSUAMG00000022483 #26 ENSUAMG00000022505 #31 ENSUAMG00000022508 #29 ENSUAMG00000022509 #30 ENSUAMG00000022510 ##34 H3C13 (ENSUAMG00000022511) #35 H2BC18 (ENSUAMG00000022512) #36 FCGR1A (ENSUAMG00000022513) #37 ENSUAMG00000022514 ENSUAMG00000022516 Polar bear MODERN SPECIES 193 ECM1 (ENSUMAG00000003701) #7 TARS2 (ENSUMAG00000003705) #8 RPRD2 (ENSUMAG00000003712) #9 PRPF3 (ENSUMAG00000003720) #11 MRPS21 (ENSUMAG00000003735) #12 CIART (ENSUMAG00000003740) #13 C1orf54 (ENSUMAG00000003742) #14 APH1A (ENSUMAG00000003746) #15 CA14 (ENSUMAG00000003751) #16 ENSUMAG00000003753 ANP32E (ENSUMAG00000003756) #17 PLEKHO1 (ENSUMAG00000003760) #18 VPS45 (ENSUMAG00000003781) #19 OTUD7B (ENSUMAG00000003786) #20 MTMR11 (ENSUMAG00000003794) #21 SF3B4 (ENSUMAG00000003802) #22 SV2A (ENSUMAG00000003804) #23 H2AC21 (ENSUMAG00000003816) #25 ENSUMAG00000003822 ##25 ENSUMAG00000003825 ##36 ENSUMAG00000003829 ENSUMAG00000003836 #30 ENSUMAG00000003882 ##36 ENSUMAG00000003899 #30 ENSUMAG00000003922 ENSUMAG00000003931 ##34 ENSUMAG00000003935 H2BC18 (ENSUMAG00000003946) #36 FCGR1A (ENSUMAG00000003967) #37 ENSUMAG00000003983 ENSUMAG00000003995 Giant Panda MODERN SPECIES 11 ADAMTSL4 (ENSAMEG00000001424) ECM1 (ENSAMEG00000001502) #7 TARS2 (ENSAMEG00000001547) #8 RPRD2 (ENSAMEG00000001598) #9 PRPF3 (ENSAMEG00000001630) #11 MRPS21 (ENSAMEG00000001703) #12 CIART (ENSAMEG00000001706) #13 C1orf54 (ENSAMEG00000001725) #14 APH1A (ENSAMEG00000001729) #15 CA14 (ENSAMEG00000001775) #16 ANP32E (ENSAMEG00000001813) #17 PLEKHO1 (ENSAMEG00000001832) #18 VPS45 (ENSAMEG00000001841) #19 OTUD7B (ENSAMEG00000010043) #20 MTMR11 (ENSAMEG00000010059) #21 SF3B4 (ENSAMEG00000010073) #22 SV2A (ENSAMEG00000010085) #23 BOLA1 (ENSAMEG00000018625) #24 H2AC21 (ENSAMEG00000030369) #25 H2AC20 (ENSAMEG00000030590) #26 H2BC21 (ENSAMEG00000024998) #29 ENSAMEG00000026973 ##34 H3C14 (ENSAMEG00000026075) #35 ENSAMEG00000031520 #36 ENSAMEG00000007093 #37 ENSAMEG00000029936 ENSAMEG00000006949 ENSAMEG00000026609 TXNIP (ENSAMEG00000017638) ENSAMEG00000017634 ANKRD34A (ENSAMEG00000017633) Mustelinae ANCESTRAL SPECIES 81 ENSGT00940000161136 ENSGT00390000006215 #7 ENSGT00940000161600 #8 ENSGT00950000183094.a #9 ENSGT00390000011497 #11 ENSGT00500000045038 #12 ENSGT00390000018360 #13 ENSGT00390000003103 #14 ENSGT00390000002049.c.a #15 ENSGT00940000156893 #16 ENSGT00950000182907.a.a #17 ENSGT00530000063760.b #18 ENSGT00550000075028 #19 ENSGT00940000159172 #20 ENSGT00940000160276 #21 ENSGT00870000136537 #22 ENSGT00950000182940.b.a.b #23 ENSGT00510000048165 #24 ENSGT00940000153118.db.a.a.b.a.b #25 ENSGT00940000153118.db.a.a.b.a.a #26 ENSGT01100000263559.B #35 ENSGT01100000263506.a.e.b #36 ENSGT01050000244808.A.b.b.a #37 ENSGT00950000183190.a.b.a.b ENSGT00420000029746.f American mink MODERN SPECIES 530 ENSNVIG00000002941 #17 PLEKHO1 (ENSNVIG00000002956) #18 VPS45 (ENSNVIG00000002966) #19 OTUD7B (ENSNVIG00000003037) #20 MTMR11 (ENSNVIG00000003067) #21 SF3B4 (ENSNVIG00000003168) #22 SV2A (ENSNVIG00000003188) #23 BOLA1 (ENSNVIG00000003246) #24 H2AC21 (ENSNVIG00000003251) #25 H2AC20 (ENSNVIG00000003252) #26 ENSNVIG00000003258 #29 ENSNVIG00000003275 ##35 ENSNVIG00000003279 #30 ENSNVIG00000003286 #29 ENSNVIG00000003349 #29 ENSNVIG00000003397 #30 ENSNVIG00000003399 ##35 H4 (ENSNVIG00000003408) ##34 ENSNVIG00000003413 #35 H2BC18 (ENSNVIG00000003417) #36 ENSNVIG00000003430 #37 Ferret MODERN SPECIES 398 ADAMTSL4 (ENSMPUG00000004691) ECM1 (ENSMPUG00000004712) #7 TARS2 (ENSMPUG00000004795) #8 RPRD2 (ENSMPUG00000005032) #9 PRPF3 (ENSMPUG00000005080) #11 MRPS21 (ENSMPUG00000005221) #12 CIART (ENSMPUG00000005224) #13 APH1A (ENSMPUG00000005237) #15 C1orf54 (ENSMPUG00000005317) #14 CA14 (ENSMPUG00000005329) #16 ANP32E (ENSMPUG00000005343) #17 PLEKHO1 (ENSMPUG00000005354) #18 VPS45 (ENSMPUG00000005390) #19 OTUD7B (ENSMPUG00000005404) #20 MTMR11 (ENSMPUG00000005535) #21 SF3B4 (ENSMPUG00000005563) #22 SV2A (ENSMPUG00000005578) #23 H2AC21 (ENSMPUG00000018422) #25 H2AC20 (ENSMPUG00000018423) #26 H2BC21 (ENSMPUG00000018424) #29 ENSMPUG00000018425 H2BC18 (ENSMPUG00000005595) #36 FCGR1A (ENSMPUG00000005605) #37 ENSMPUG00000005618 ENSMPUG00000005632 Canidae ANCESTRAL SPECIES 18 ENSGT00940000161136 ENSGT00390000006215 #7 ENSGT00940000161600 #8 ENSGT00950000183094.a #9 ENSGT00390000011497 #11 ENSGT00500000045038.k #12 ENSGT00390000018360 #13 ENSGT00390000003103 #14 ENSGT00390000002049.c.a #15 ENSGT00940000156893 #16 ENSGT00950000182907.a.a #17 ENSGT00530000063760.b #18 ENSGT00550000075028 #19 ENSGT00940000159172 #20 ENSGT00940000160276 #21 ENSGT00870000136537 #22 ENSGT00950000182940.b.a.b #23 ENSGT00510000048165 #24 ENSGT00940000153118.db.a.a.b.a.b #25 ENSGT00940000153118.db.a.a.b.a.a #26 ENSGT01100000263575.B.u #29 ENSGT01060000248528.b.kh.yb.c.a ##34 ENSGT01100000263559.A.f ##35 ENSGT01100000263506.a.e.b #36 ENSGT01050000244808.A.b.b.a #37 ENSGT00950000183190.a.b.a.b ENSGT00420000029746.f ENSGT00950000183112.b.b ENSGT00940000158522 ENSGT01100000263883 ENSGT00390000012355.B.b Red fox DUPLICATION Red fox MODERN SPECIES 176 ADAMTSL4 (ENSVVUG00000011516) ENSVVUG00000011504 ECM1 (ENSVVUG00000011492) #7 TARS2 (ENSVVUG00000009226) #8 RPRD2 (ENSVVUG00000009075) #9 PRPF3 (ENSVVUG00000007933) #11 MRPS21 (ENSVVUG00000007865) #12 CIART (ENSVVUG00000007857) #13 APH1A (ENSVVUG00000007850) #15 CA14 (ENSVVUG00000007843) #16 ENSVVUG00000007839 #17 PLEKHO1 (ENSVVUG00000007828) #18 VPS45 (ENSVVUG00000007786) #19 OTUD7B (ENSVVUG00000007773) #20 MTMR11 (ENSVVUG00000007745) #21 ENSVVUG00000007732 #22 SV2A (ENSVVUG00000007726) #23 BOLA1 (ENSVVUG00000007718) #24 H2AC21 (ENSVVUG00000007714) #25 H2AC20 (ENSVVUG00000007707) #26 H2BC21 (ENSVVUG00000007671) #29 ENSVVUG00000007660 ##34 H3-7 (ENSVVUG00000007640) ##35 H2BC18 (ENSVVUG00000007606) #36 ENSVVUG00000007601 ENSVVUG00000007595 ENSVVUG00000007591 FCGR1A (ENSVVUG00000007556) #37 ENSVVUG00000007552 HJV (ENSVVUG00000007529) TXNIP (ENSVVUG00000007524) Red fox MODERN SPECIES 104 SPATA2 (ENSVVUG00000022404) RNF114 (ENSVVUG00000022407) SNAI1 (ENSVVUG00000022410) ENSVVUG00000022417 TMEM189 (ENSVVUG00000022420) PTPN1 (ENSVVUG00000022432) RIPOR3 (ENSVVUG00000022436) PARD6B (ENSVVUG00000022445) BCAS4 (ENSVVUG00000022450) ADNP (ENSVVUG00000022456) DPM1 (ENSVVUG00000022458) MOCS3 (ENSVVUG00000022461) KCNG1 (ENSVVUG00000022465) NFATC2 (ENSVVUG00000022491) ATP9A (ENSVVUG00000022659) ENSVVUG00000022697 #22 ZFP64 (ENSVVUG00000022699) TSHZ2 (ENSVVUG00000022715) ENSVVUG00000022718 ZNF217 (ENSVVUG00000022722) BCAS1 (ENSVVUG00000022730) CYP24A1 (ENSVVUG00000022737) PFDN4 (ENSVVUG00000022740) DOK5 (ENSVVUG00000022743) Canis_lupus ANCESTRAL SPECIES 10 ENSGT00940000161136 ENSGT00390000006215 #7 ENSGT00940000161600 #8 ENSGT00950000183094.a #9 ENSGT00390000011497 #11 ENSGT00500000045038.k #12 ENSGT00390000018360 #13 ENSGT00390000003103 #14 ENSGT00390000002049.c.a #15 ENSGT00940000156893 #16 ENSGT00950000182907.a.a #17 ENSGT00530000063760.b #18 ENSGT00550000075028 #19 ENSGT00940000159172 #20 ENSGT00940000160276 #21 ENSGT00870000136537 #22 ENSGT00950000182940.b.a.b #23 ENSGT00510000048165 #24 ENSGT00940000153118.db.a.a.b.a.b #25 ENSGT00940000156302 #30 ENSGT01100000263575.B.u #29 ENSGT01100000263506.a.e.b #36 ENSGT01050000244808.A.b.b.a #37 ENSGT00950000183190.a.b.a.b ENSGT00420000029746.f ENSGT00950000183112.b.b ENSGT00940000158522 ENSGT01100000263883 ENSGT00390000012355.B.b ENSGT00390000005869.a ENSGT00730000111185 Dog MODERN SPECIES 8 ADAMTSL4 (ENSCAFG00845018385) ECM1 (ENSCAFG00845018089) #7 TARS2 (ENSCAFG00845017490) #8 RPRD2 (ENSCAFG00845017196) #9 PRPF3 (ENSCAFG00845017034) #11 MRPS21 (ENSCAFG00845016904) #12 CIART (ENSCAFG00845016855) #13 C1orf54 (ENSCAFG00845016794) #14 APH1A (ENSCAFG00845016683) #15 CA14 (ENSCAFG00845016587) #16 ANP32E (ENSCAFG00845012804) #17 PLEKHO1 (ENSCAFG00845012601) #18 VPS45 (ENSCAFG00845012364) #19 OTUD7B (ENSCAFG00845012281) #20 MTMR11 (ENSCAFG00845012198) #21 SF3B4 (ENSCAFG00845012146) #22 SV2A (ENSCAFG00845012074) #23 ENSCAFG00845012017 #24 ENSCAFG00845011998 #25 ENSCAFG00845011880 #30 ENSCAFG00845011830 ENSCAFG00845011803 #29 FCGR1A (ENSCAFG00845011691) #37 ENSCAFG00845011630 ENSCAFG00845011593 ENSCAFG00845011506 TXNIP (ENSCAFG00845011435) POLR3GL (ENSCAFG00845011382) ANKRD34A (ENSCAFG00845011351) LIX1L (ENSCAFG00845011297) RBM8A (ENSCAFG00845011260) Dingo MODERN SPECIES 223 ADAMTSL4 (ENSCAFG00020019552) ECM1 (ENSCAFG00020019611) #7 TARS2 (ENSCAFG00020019615) #8 RPRD2 (ENSCAFG00020019619) #9 PRPF3 (ENSCAFG00020019653) #11 MRPS21 (ENSCAFG00020019663) #12 CIART (ENSCAFG00020019665) #13 C1orf54 (ENSCAFG00020019667) #14 APH1A (ENSCAFG00020019671) #15 CA14 (ENSCAFG00020019676) #16 ENSCAFG00020019677 #17 PLEKHO1 (ENSCAFG00020019684) #18 VPS45 (ENSCAFG00020019689) #19 OTUD7B (ENSCAFG00020019694) #20 MTMR11 (ENSCAFG00020019770) #21 SF3B4 (ENSCAFG00020019775) #22 SV2A (ENSCAFG00020019781) #23 BOLA1 (ENSCAFG00020019784) #24 ENSCAFG00020019789 ##25 H2AC21 (ENSCAFG00020019793) #25 ENSCAFG00020019797 #29 ENSCAFG00020019814 ##35 ENSCAFG00020019823 #30 ENSCAFG00020019846 #29 ENSCAFG00020019848 ENSCAFG00020019854 #29 ENSCAFG00020019867 #30 ENSCAFG00020019897 ##34 H2BC18 (ENSCAFG00020019901) #36 FCGR1A (ENSCAFG00020019916) #37 ENSCAFG00020019917 Laurasiatheria_c ANCESTRAL SPECIES ENSGT00940000161136 ENSGT00390000006215 #7 ENSGT00940000161600 #8 ENSGT00950000183094.a #9 ENSGT00390000011497 #11 ENSGT00500000045038 #12 ENSGT00390000018360 #13 ENSGT00390000003103 #14 ENSGT00390000002049.c.a #15 ENSGT00940000156893 #16 ENSGT00950000182907.a.a #17 ENSGT00530000063760.b #18 ENSGT00550000075028 #19 ENSGT00940000159172 #20 ENSGT00940000160276 #21 ENSGT00870000136537 #22 ENSGT00950000182940.b.a.b #23 ENSGT00510000048165 #24 ENSGT00940000153118.db.a.a.b.a.b #25 ENSGT00940000153118.db.a.a.b.a.a #26 ENSGT01100000263506.a.e.a.b ##36 ENSGT01100000263559.B #35 ENSGT01100000263575.A #31 ENSGT00940000156302 #30 ENSGT01100000263575.B.u #29 ENSGT00940000153125.D.a.a ENSGT01100000263559.A.f ##35 ENSGT01100000263506.a.e.b #36 ENSGT01050000244808.A.b.b.a #37 ENSGT00950000183190.a.b.a.b ENSGT00420000029746.f Chiroptera ANCESTRAL SPECIES 20 ENSGT00940000161136 ENSGT00390000006215 #7 ENSGT00940000161600 #8 ENSGT00950000183094.a #9 ENSGT00390000011497 #11 ENSGT00500000045038 #12 ENSGT00390000018360 #13 ENSGT00390000003103 #14 ENSGT00390000002049.c.a #15 ENSGT00940000156893 #16 ENSGT00950000182907.a.a #17 ENSGT00530000063760.b #18 ENSGT00550000075028 #19 ENSGT00940000159172 #20 ENSGT00940000160276 #21 ENSGT00870000136537 #22 ENSGT00950000182940.b.a.b #23 ENSGT00510000048165 #24 ENSGT00940000153118.db.a.a.b.a.b #25 ENSGT00940000153118.db.a.a.b.a.a #26 ENSGT01100000263575.A #31 ENSGT00940000156302 #30 ENSGT01100000263559.B #35 ENSGT00940000160426 ENSGT01100000263506.a.e.a.a.a.b.a.a.b.a.b.b ##36 ENSGT00940000163525 ENSGT01060000248528.b.kh.yb.d ##34 ENSGT00940000155501.a.b ENSGT01100000263514.A.e.a.b.a.b.a.a.a.b.a.a.a.b ENSGT00940000153125.D.a.a ENSGT01100000263575.B.u #29 Microchiroptera ANCESTRAL SPECIES 21 ENSGT00940000161136 ENSGT00390000006215 #7 ENSGT00940000161600 #8 ENSGT00950000183094.a #9 ENSGT00390000011497 #11 ENSGT00500000045038 #12 ENSGT00390000018360 #13 ENSGT00390000003103 #14 ENSGT00390000002049.c.a #15 ENSGT00940000156893 #16 ENSGT00950000182907.a.a #17 ENSGT00530000063760.b #18 ENSGT00550000075028 #19 ENSGT00940000159172 #20 ENSGT00940000160276 #21 ENSGT00870000136537 #22 ENSGT00950000182940.b.a.b #23 ENSGT00510000048165 #24 ENSGT00940000153118.db.a.a.b.a.b #25 ENSGT00940000153118.db.a.a.b.a.a #26 ENSGT01100000263506.a.e.a.b ##36 ENSGT01100000263514.A.e.a.b.a.b.a.a.b ENSGT01060000248528.b.jh.b ##34 ENSGT01060000248528.b.kh.yb.d ##34 ENSGT00940000155501.a.b ENSGT01100000263514.A.e.a.b.a.b.a.a.a.b.a.a.a.b ENSGT00940000153125.D.a.a ENSGT01100000263575.B.u #29 ENSGT00940000156302 #30 ENSGT01100000263559.A.f ##35 ENSGT01100000263506.a.e.b #36 Greater horseshoe bat MODERN SPECIES 14 ADAMTSL4 (ENSRFEG00010020724) ECM1 (ENSRFEG00010020676) #7 TARS2 (ENSRFEG00010020572) #8 RPRD2 (ENSRFEG00010020482) #9 PRPF3 (ENSRFEG00010020436) #11 ENSRFEG00010020409 #12 CIART (ENSRFEG00010020371) #13 C1orf54 (ENSRFEG00010020321) #14 APH1A (ENSRFEG00010020244) #15 CA14 (ENSRFEG00010020216) #16 ANP32E (ENSRFEG00010020103) #17 PLEKHO1 (ENSRFEG00010020048) #18 VPS45 (ENSRFEG00010019952) #19 OTUD7B (ENSRFEG00010019911) #20 MTMR11 (ENSRFEG00010019669) #21 SF3B4 (ENSRFEG00010019596) #22 SV2A (ENSRFEG00010019515) #23 BOLA1 (ENSRFEG00010019489) #24 ENSRFEG00010019479 H2AC21 (ENSRFEG00010019466) #25 H2AC20 (ENSRFEG00010019447) #26 ENSRFEG00010019413 ##36 ENSRFEG00010019403 #29 ENSRFEG00010019396 #30 ENSRFEG00010019380 ##35 ENSRFEG00010019363 ##34 ENSRFEG00010019351 ##34 ENSRFEG00010019339 ##35 H2BC18 (ENSRFEG00010019313) #36 FCGR1A (ENSRFEG00010019271) #37 HJV (ENSRFEG00010019205) Microbat MODERN SPECIES 1088 ENSMLUG00000029657 ADAMTSL4 (ENSMLUG00000003472) ECM1 (ENSMLUG00000013133) #7 TARS2 (ENSMLUG00000013123) #8 RPRD2 (ENSMLUG00000013112) #9 MRPS21 (ENSMLUG00000025875) #12 CIART (ENSMLUG00000013709) #13 C1orf54 (ENSMLUG00000013704) #14 APH1A (ENSMLUG00000013692) #15 CA14 (ENSMLUG00000013677) #16 ANP32E (ENSMLUG00000013669) #17 VPS45 (ENSMLUG00000010858) #19 ENSMLUG00000025917 OTUD7B (ENSMLUG00000010828) #20 MTMR11 (ENSMLUG00000010798) #21 SF3B4 (ENSMLUG00000010789) #22 SV2A (ENSMLUG00000010756) #23 BOLA1 (ENSMLUG00000010753) #24 H2AC21 (ENSMLUG00000010741) #25 H2AC20 (ENSMLUG00000022626) #26 ENSMLUG00000010548 ##36 H4C5 (ENSMLUG00000028953) ##34 ENSMLUG00000010730 #30 ENSMLUG00000010719 #31 ENSMLUG00000025238 #30 ENSMLUG00000028731 ##34 ENSMLUG00000027063 ##34 H2BC18 (ENSMLUG00000028645) #36 FCGR1A (ENSMLUG00000011569) #37 ENSMLUG00000024176 ENSMLUG00000028622 Megabat MODERN SPECIES 2771 PLEKHO1 (ENSPVAG00000014181) #18 VPS45 (ENSPVAG00000014180) #19 OTUD7B (ENSPVAG00000014176) #20 MTMR11 (ENSPVAG00000014172) #21 SF3B4 (ENSPVAG00000014171) #22 SV2A (ENSPVAG00000014170) #23 ENSPVAG00000014167 H2AC20 (ENSPVAG00000014165) #26 ENSPVAG00000014163 #31 Equus ANCESTRAL SPECIES 3 ENSGT00940000161136 ENSGT00390000006215 #7 ENSGT00940000161600 #8 ENSGT00950000183094.a #9 ENSGT00390000011497 #11 ENSGT00500000045038 #12 ENSGT00390000018360 #13 ENSGT00390000003103 #14 ENSGT00390000002049.c.a #15 ENSGT00940000156893 #16 ENSGT00950000182907.a.a #17 ENSGT00530000063760.b #18 ENSGT00550000075028 #19 ENSGT00940000159172 #20 ENSGT00940000160276 #21 ENSGT00870000136537 #22 ENSGT00950000182940.b.a.b #23 ENSGT00510000048165 #24 ENSGT00940000153118.db.a.a.b.a.b #25 ENSGT00940000153118.db.a.a.b.a.a #26 ENSGT01100000263559.B #35 ENSGT01100000263514.A.e.a.a ENSGT00940000155501.a.b ENSGT01060000248528.b.kh.yb.d ##34 ENSGT01060000248528.b.jh.b ##34 ENSGT01100000263567.a.a ENSGT00940000160426 ENSGT01100000263506.a.e.a.a.a.b.a.a.a ##36 ENSGT01060000248528.b.jh.a.b ##34 ENSGT00940000163036.g.a.a.a ENSGT01100000263575.A #31 Donkey MODERN SPECIES 17 ECM1 (ENSEASG00005001606) #7 TARS2 (ENSEASG00005001587) #8 RPRD2 (ENSEASG00005001574) #9 PRPF3 (ENSEASG00005001566) #11 MRPS21 (ENSEASG00005001557) #12 CIART (ENSEASG00005001554) #13 C1orf54 (ENSEASG00005025776) #14 APH1A (ENSEASG00005035187) #15 CA14 (ENSEASG00005001536) #16 ANP32E (ENSEASG00005038731) #17 PLEKHO1 (ENSEASG00005001526) #18 VPS45 (ENSEASG00005001512) #19 ENSEASG00005027301 #19 OTUD7B (ENSEASG00005001503) #20 MTMR11 (ENSEASG00005001485) #21 SF3B4 (ENSEASG00005001477) #22 SV2A (ENSEASG00005001472) #23 ENSEASG00005001466 #24 H2AC21 (ENSEASG00005032093) #25 ENSEASG00005025005 #26 ENSEASG00005026834 #35 ENSEASG00005033525 #31 ENSEASG00005027933 #31 ENSEASG00005036493 ##34 ENSEASG00005037866 #35 ENSEASG00005002125 ENSEASG00005002130 ENSEASG00005037767 #37 ENSEASG00005025106 TXNIP (ENSEASG00005007477) POLR3GL (ENSEASG00005007466) Artiodactyla ANCESTRAL SPECIES ENSGT00940000161136 ENSGT00390000006215 #7 ENSGT00940000161600 #8 ENSGT00950000183094.a #9 ENSGT00390000011497 #11 ENSGT00500000045038 #12 ENSGT00390000018360 #13 ENSGT00390000003103 #14 ENSGT00390000002049.c.a #15 ENSGT00940000156893 #16 ENSGT00950000182907.a.a #17 ENSGT00530000063760.b #18 ENSGT00550000075028 #19 ENSGT00940000159172 #20 ENSGT00940000160276 #21 ENSGT00870000136537 #22 ENSGT00950000182940.b.a.b #23 ENSGT00510000048165 #24 ENSGT00940000153118.db.a.a.b.a.b #25 ENSGT00940000153118.db.a.a.b.a.a #26 ENSGT01100000263575.A #31 ENSGT00940000153092.a.a.c.a.b.b.b ENSGT01100000263514.A.e.a.b.a.b.a.a.a.a ENSGT00990000203553.c.a.a.a.b ENSGT01100000263506.a.e.a.a.b.b ##36 ENSGT01100000263474.a.b.b.e.a.a.a.b ENSGT00940000153118.db.b ##25 ENSGT01100000263559.B #35 ENSGT01100000263506.a.e.b #36 ENSGT01050000244808.A.b.b.a #37 ENSGT00950000183190.a.b.a.b Suina ANCESTRAL SPECIES 8 ENSGT00940000161136 ENSGT00390000006215 #7 ENSGT00940000161600 #8 ENSGT00950000183094.a #9 ENSGT00390000011497 #11 ENSGT00500000045038 #12 ENSGT00390000018360 #13 ENSGT00390000003103 #14 ENSGT00390000002049.c.a #15 ENSGT00940000156893 #16 ENSGT00950000182907.a.a #17 ENSGT00530000063760.b #18 ENSGT00550000075028 #19 ENSGT00940000159172 #20 ENSGT00940000160276 #21 ENSGT00870000136537 #22 ENSGT00950000182940.b.a.b #23 ENSGT00510000048165 #24 ENSGT00940000153118.db.a.a.b.a.b #25 ENSGT00940000153118.db.a.a.b.a.a #26 ENSGT01100000263575.B.u #29 ENSGT01100000263559.B #35 ENSGT00940000153118.db.b ##25 ENSGT01100000263575.A #31 ENSGT00940000156302 #30 ENSGT01100000263559.A.f ##35 ENSGT00940000163082 ENSGT01100000263517.b.d.m.a.a.b ENSGT01060000248528.b.kh.yb ##34 ENSGT01100000263474.a.b.a.d ENSGT00940000163525 Pig MODERN SPECIES 12 ADAMTSL4 (ENSSSCG00000006651) ECM1 (ENSSSCG00000029230) #7 TARS2 (ENSSSCG00000026395) #8 RPRD2 (ENSSSCG00000030291) #9 PRPF3 (ENSSSCG00000030119) #11 ENSSSCG00000052263 #12 CIART (ENSSSCG00000038374) #13 C1orf54 (ENSSSCG00000045950) #14 APH1A (ENSSSCG00000028297) #15 CA14 (ENSSSCG00000027875) #16 ANP32E (ENSSSCG00000035209) #17 PLEKHO1 (ENSSSCG00000022784) #18 VPS45 (ENSSSCG00000006661) #19 OTUD7B (ENSSSCG00000006663) #20 MTMR11 (ENSSSCG00000006664) #21 SF3B4 (ENSSSCG00000006665) #22 SV2A (ENSSSCG00000006666) #23 BOLA1 (ENSSSCG00000006667) #24 H2AC21 (ENSSSCG00000063420) #25 H2AC20 (ENSSSCG00000034598) #26 ENSSSCG00000047083 #29 ENSSSCG00000053902 #35 ENSSSCG00000057447 #30 H2BC21 (ENSSSCG00000060759) #29 ENSSSCG00000055629 #31 ENSSSCG00000057512 #30 H3C14 (ENSSSCG00000063270) ##35 ENSSSCG00000059426 ##34 H2BC18 (ENSSSCG00000062160) #36 FCGR1A (ENSSSCG00000006678) #37 ENSSSCG00000006679 Chacoan peccary MODERN SPECIES 29 ECM1 (ENSCWAG00000008573) #7 TARS2 (ENSCWAG00000008672) #8 RPRD2 (ENSCWAG00000008913) #9 PRPF3 (ENSCWAG00000008995) #11 MRPS21 (ENSCWAG00000009071) #12 CIART (ENSCWAG00000009100) #13 C1orf54 (ENSCWAG00000009306) #14 APH1A (ENSCWAG00000009346) #15 CA14 (ENSCWAG00000009438) #16 ANP32E (ENSCWAG00000009540) #17 PLEKHO1 (ENSCWAG00000009593) #18 VPS45 (ENSCWAG00000009712) #19 ENSCWAG00000009861 OTUD7B (ENSCWAG00000009903) #20 MTMR11 (ENSCWAG00000009987) #21 SF3B4 (ENSCWAG00000010291) #22 SV2A (ENSCWAG00000010325) #23 BOLA1 (ENSCWAG00000010457) #24 H2AC21 (ENSCWAG00000010470) #25 H2AC20 (ENSCWAG00000010494) #26 H2BC21 (ENSCWAG00000010520) #29 H3C15 (ENSCWAG00000010535) #35 ENSCWAG00000010555 ##25 ENSCWAG00000010575 ENSCWAG00000010582 ##34 H2BC18 (ENSCWAG00000010598) #36 ENSCWAG00000010635 #37 ENSCWAG00000010702 ENSCWAG00000010758 HJV (ENSCWAG00000010824) TXNIP (ENSCWAG00000010902) Artiodactyla_a ANCESTRAL SPECIES ENSGT00940000161136 ENSGT00390000006215 #7 ENSGT00940000161600 #8 ENSGT00950000183094.a #9 ENSGT00390000011497 #11 ENSGT00500000045038 #12 ENSGT00390000018360 #13 ENSGT00390000003103 #14 ENSGT00390000002049.c.a #15 ENSGT00940000156893 #16 ENSGT00950000182907.a.a #17 ENSGT00530000063760.b #18 ENSGT00550000075028 #19 ENSGT00940000159172 #20 ENSGT00940000160276 #21 ENSGT00870000136537 #22 ENSGT00950000182940.b.a.b #23 ENSGT00510000048165 #24 ENSGT00940000153118.db.a.a.b.a.b #25 ENSGT00940000153118.db.a.a.b.a.a #26 ENSGT01100000263575.B.u #29 ENSGT01100000263506.a.e.a.a.a.a.a ##36 ENSGT01100000263575.B.t.a.a.a ##29 ENSGT00940000156302 #30 ENSGT01100000263559.B #35 ENSGT01100000263569.a.b.b ENSGT00940000164494 ENSGT01060000248528.a.b.a.a.a.b ##34 ENSGT01100000263559.A.f ##35 ENSGT01100000263506.a.e.b #36 ENSGT01050000244808.A.b.b.a #37 Artiodactyla_b ANCESTRAL SPECIES ENSGT00940000161136 ENSGT00390000006215 #7 ENSGT00940000161600 #8 ENSGT00950000183094.a #9 ENSGT00390000011497 #11 ENSGT00500000045038 #12 ENSGT00390000018360 #13 ENSGT00390000003103 #14 ENSGT00390000002049.c.a #15 ENSGT00940000156893 #16 ENSGT00950000182907.a.a #17 ENSGT00530000063760.b #18 ENSGT00550000075028 #19 ENSGT00940000159172 #20 ENSGT00940000160276 #21 ENSGT00870000136537 #22 ENSGT00950000182940.b.a.b #23 ENSGT00510000048165 #24 ENSGT00940000153118.db.a.a.b.a.b #25 ENSGT00940000153118.db.a.a.b.a.a #26 ENSGT01100000263575.B.u #29 ENSGT01100000263559.A.f ##35 ENSGT01060000248528.a.b.a.a.a.b ##34 ENSGT00940000164494 ENSGT01100000263569.a.b.b ENSGT01100000263559.B #35 ENSGT00940000156302 #30 ENSGT01100000263575.B.t.a.a.a ##29 ENSGT01060000248528.b.jh.b ##34 ENSGT01100000263514.A.e.a.a ENSGT01100000263506.a.e.b #36 Cetacea ANCESTRAL SPECIES ENSGT00940000161136 ENSGT00390000006215 #7 ENSGT00940000161600 #8 ENSGT00950000183094.a #9 ENSGT00390000011497 #11 ENSGT00500000045038 #12 ENSGT00390000018360 #13 ENSGT00390000003103 #14 ENSGT00390000002049.c.a #15 ENSGT00940000156893 #16 ENSGT00950000182907.a.a #17 ENSGT00530000063760.b #18 ENSGT00550000075028 #19 ENSGT00940000159172 #20 ENSGT00940000160276 #21 ENSGT00870000136537 #22 ENSGT00950000182940.b.a.b #23 ENSGT00510000048165 #24 ENSGT00940000153118.db.a.a.b.a.b #25 ENSGT00940000153118.db.a.a.b.a.a #26 ENSGT01100000263575.B.u #29 ENSGT01100000263559.B #35 ENSGT00940000156302.m.b #30 ENSGT01100000263575.B.t.a.a.a.a.b ##29 ENSGT01100000263575.B.t.a.a.a.a.a ##29 ENSGT00940000156302.m.a #30 ENSGT01100000263506.a.e.a.a.a.a.a ##36 ENSGT01060000248528.b.jh.b ##34 ENSGT01100000263559.A.f ##35 ENSGT01100000263506.a.e.b #36 ENSGT00950000183190.a.b.a.b Odontoceti ANCESTRAL SPECIES ENSGT00940000161136 ENSGT00390000006215 #7 ENSGT00940000161600 #8 ENSGT00950000183094.a #9 ENSGT00390000011497 #11 ENSGT00500000045038 #12 ENSGT00390000018360 #13 ENSGT00390000003103 #14 ENSGT00390000002049.c.a #15 ENSGT00940000156893 #16 ENSGT00950000182907.a.a #17 ENSGT00530000063760.b #18 ENSGT00550000075028 #19 ENSGT00940000159172 #20 ENSGT00940000160276 #21 ENSGT00870000136537 #22 ENSGT00950000182940.b.a.b #23 ENSGT00510000048165 #24 ENSGT00940000153118.db.a.a.b.a.b #25 ENSGT00940000153118.db.a.a.b.a.a #26 ENSGT01100000263575.B.u #29 ENSGT01100000263559.B #35 ENSGT00940000156302.m.a #30 ENSGT01100000263575.B.t.a.a.a.a.a ##29 ENSGT01100000263575.B.t.a.a.a.a.b ##29 ENSGT00940000156302.m.b #30 ENSGT01100000263559.A.f ##35 ENSGT01100000263575.B.t.a.a.b ##29 ENSGT01100000263506.a.e.b #36 ENSGT00950000183190.a.b.a.b ENSGT00420000029746.f Odontoceti_a ANCESTRAL SPECIES ENSGT00940000161136 ENSGT00390000006215 #7 ENSGT00940000161600 #8 ENSGT00950000183094.a #9 ENSGT00390000011497 #11 ENSGT00500000045038 #12 ENSGT00390000018360 #13 ENSGT00390000003103 #14 ENSGT00390000002049.c.a #15 ENSGT00940000156893 #16 ENSGT00950000182907.a.a #17 ENSGT00530000063760.b #18 ENSGT00550000075028 #19 ENSGT00940000159172 #20 ENSGT00940000160276 #21 ENSGT00870000136537 #22 ENSGT00950000182940.b.a.b #23 ENSGT00510000048165 #24 ENSGT00940000153118.db.a.a.b.a.b #25 ENSGT00940000153118.db.a.a.b.a.a #26 ENSGT01100000263575.B.u #29 ENSGT01100000263559.B #35 ENSGT00940000156302.m.a.b #30 ENSGT01100000263575.B.t.a.a.a.a.a ##29 ENSGT01100000263575.B.t.a.a.a.a.b ##29 ENSGT00940000156302.m.b #30 ENSGT01100000263559.A.f ##35 ENSGT01100000263506.a.e.b #36 ENSGT00950000183190.a.b.a.b ENSGT00420000029746.f ENSGT00950000183112.b.b Odontoceti_b ANCESTRAL SPECIES ENSGT00940000161136 ENSGT00390000006215 #7 ENSGT00940000161600 #8 ENSGT00950000183094.a #9 ENSGT00390000011497 #11 ENSGT00500000045038 #12 ENSGT00390000018360 #13 ENSGT00390000003103 #14 ENSGT00390000002049.c.a #15 ENSGT00940000156893 #16 ENSGT00950000182907.a.a #17 ENSGT00530000063760.b #18 ENSGT00550000075028 #19 ENSGT00940000159172 #20 ENSGT00940000160276 #21 ENSGT00870000136537 #22 ENSGT00950000182940.b.a.b #23 ENSGT00510000048165 #24 ENSGT00940000153118.db.a.a.b.a.b #25 ENSGT00940000153118.db.a.a.b.a.a #26 ENSGT01100000263575.B.u #29 ENSGT01100000263559.A.f ##35 ENSGT00940000156302.m.b #30 ENSGT01100000263575.B.t.a.a.a.a.b ##29 ENSGT01100000263575.B.t.a.a.a.a.a ##29 ENSGT00940000156302.m.a.b #30 ENSGT01100000263559.B #35 ENSGT01100000263506.a.e.b #36 ENSGT00950000183190.a.b.a.b ENSGT00420000029746.f ENSGT00950000183112.b.b Monodontidae ANCESTRAL SPECIES ENSGT00940000161136 ENSGT00390000006215 #7 ENSGT00940000161600 #8 ENSGT00950000183094.a #9 ENSGT00390000011497 #11 ENSGT00500000045038 #12 ENSGT00390000018360 #13 ENSGT00390000003103 #14 ENSGT00390000002049.c.a #15 ENSGT00940000156893 #16 ENSGT00950000182907.a.a #17 ENSGT00530000063760.b #18 ENSGT00550000075028.w.a #19 ENSGT00940000159172 #20 ENSGT00940000160276 #21 ENSGT00870000136537 #22 ENSGT00950000182940.b.a.b #23 ENSGT00510000048165 #24 ENSGT00940000153118.db.a.a.b.a.b #25 ENSGT00940000153118.db.a.a.b.a.a #26 ENSGT01100000263575.B.t.a.a.b ##29 ENSGT01100000263559.A.f ##35 ENSGT01060000248528.b.jh.b ##34 ENSGT01100000263506.a.e.a.a.a.a.a ##36 ENSGT01100000263559.B #35 ENSGT01100000263506.a.e.b #36 ENSGT00950000183190.a.b.a.b ENSGT00420000029746.f ENSGT00950000183112.b.b ENSGT00940000158522 ENSGT01060000248645 Beluga whale MODERN SPECIES 99 ECM1 (ENSDLEG00000009658) #8 RPRD2 (ENSDLEG00000009754) #9 PRPF3 (ENSDLEG00000009787) #11 MRPS21 (ENSDLEG00000009817) #12 CIART (ENSDLEG00000009825) #13 ENSDLEG00000009839 APH1A (ENSDLEG00000009850) #15 ENSDLEG00000009879 CA14 (ENSDLEG00000009908) #16 ANP32E (ENSDLEG00000009954) #17 PLEKHO1 (ENSDLEG00000009972) #18 VPS45 (ENSDLEG00000009999) #19 ENSDLEG00000010020 #19 OTUD7B (ENSDLEG00000010038) #20 MTMR11 (ENSDLEG00000010078) #21 SF3B4 (ENSDLEG00000010135) #22 SV2A (ENSDLEG00000010159) #23 BOLA1 (ENSDLEG00000010185) #24 ENSDLEG00000010198 #30 H2AC21 (ENSDLEG00000010209) #25 ENSDLEG00000010220 ##36 ENSDLEG00000010243 ##34 H3-7 (ENSDLEG00000010255) ##35 H2BC18 (ENSDLEG00000010273) #36 ENSDLEG00000010280 ENSDLEG00000010319 Narwhal MODERN SPECIES 304 ADAMTSL4 (ENSMMNG00015004588) ECM1 (ENSMMNG00015004604) #7 TARS2 (ENSMMNG00015004626) #8 RPRD2 (ENSMMNG00015004667) #9 PRPF3 (ENSMMNG00015004709) #11 MRPS21 (ENSMMNG00015004720) #12 CIART (ENSMMNG00015000077) #13 C1orf54 (ENSMMNG00015000118) #14 APH1A (ENSMMNG00015000151) #15 CA14 (ENSMMNG00015000189) #16 ANP32E (ENSMMNG00015000229) #17 PLEKHO1 (ENSMMNG00015000265) #18 ENSMMNG00015000303 #19 OTUD7B (ENSMMNG00015000357) #20 MTMR11 (ENSMMNG00015000420) #21 SF3B4 (ENSMMNG00015000508) #22 SV2A (ENSMMNG00015000538) #23 BOLA1 (ENSMMNG00015000565) #24 H2AC21 (ENSMMNG00015000574) #25 H2AC20 (ENSMMNG00015000583) #26 ENSMMNG00015000589 ##29 ENSMMNG00015000597 ##35 ENSMMNG00015000609 ##35 ENSMMNG00015000624 ##34 H3C13 (ENSMMNG00015000641) #35 H2BC18 (ENSMMNG00015000651) #36 ENSMMNG00015000669 ENSMMNG00015000699 HJV (ENSMMNG00015000764) TXNIP (ENSMMNG00015000791) ENSMMNG00015000840 Vaquita MODERN SPECIES MCL1 (ENSPSNG00000002164) ADAMTSL4 (ENSPSNG00000002117) ECM1 (ENSPSNG00000002059) #7 TARS2 (ENSPSNG00000001970) #8 RPRD2 (ENSPSNG00000001899) #9 PRPF3 (ENSPSNG00000001838) #11 MRPS21 (ENSPSNG00000001805) #12 CIART (ENSPSNG00000001759) #13 ENSPSNG00000001681 #15 CA14 (ENSPSNG00000001634) #16 ANP32E (ENSPSNG00000001573) #17 PLEKHO1 (ENSPSNG00000001496) #18 VPS45 (ENSPSNG00000001453) #19 OTUD7B (ENSPSNG00000001389) #20 MTMR11 (ENSPSNG00000001321) #21 SF3B4 (ENSPSNG00000001286) #22 SV2A (ENSPSNG00000001263) #23 BOLA1 (ENSPSNG00000001237) #24 H2AC21 (ENSPSNG00000001218) #25 H2AC20 (ENSPSNG00000001208) #26 H2BC21 (ENSPSNG00000001199) #29 ENSPSNG00000001182 ##35 ENSPSNG00000001168 #30 ENSPSNG00000001160 ##29 ENSPSNG00000001148 ##29 ENSPSNG00000001132 #30 ENSPSNG00000001122 #35 H3-7 (ENSPSNG00000001054) ##35 H2BC18 (ENSPSNG00000001038) #36 ENSPSNG00000001015 ENSPSNG00000000971 Dolphin MODERN SPECIES 2133 OTUD7B (ENSTTRG00000005256) #20 MTMR11 (ENSTTRG00000005231) #21 SF3B4 (ENSTTRG00000005217) #22 SV2A (ENSTTRG00000005189) #23 BOLA1 (ENSTTRG00000005176) #24 H2AC21 (ENSTTRG00000005162) #25 H2AC20 (ENSTTRG00000005146) #26 H2BC21 (ENSTTRG00000005143) #29 H3C14 (ENSTTRG00000005140) #35 ENSTTRG00000005136 #30 ENSTTRG00000005132 #30 ENSTTRG00000005120 ##34 H3-7 (ENSTTRG00000005108) ##35 H2BC18 (ENSTTRG00000005097) #36 Sperm whale MODERN SPECIES 15 ARNT (ENSPCTG00005009289) CTXND2 (ENSPCTG00005009405) ENSPCTG00005009425 RPRD2 (ENSPCTG00005009512) #9 PRPF3 (ENSPCTG00005009677) #11 MRPS21 (ENSPCTG00005009845) #12 CIART (ENSPCTG00005009880) #13 C4H1orf54 (ENSPCTG00005009937) #14 APH1A (ENSPCTG00005010018) #15 CA14 (ENSPCTG00005010130) #16 ANP32E (ENSPCTG00005010280) #17 PLEKHO1 (ENSPCTG00005010430) #18 VPS45 (ENSPCTG00005010502) #19 OTUD7B (ENSPCTG00005010704) #20 MTMR11 (ENSPCTG00005010793) #21 SF3B4 (ENSPCTG00005011142) #22 SV2A (ENSPCTG00005011188) #23 BOLA1 (ENSPCTG00005011392) #24 H2AC21 (ENSPCTG00005011410) #25 H2AC20 (ENSPCTG00005011425) #26 ENSPCTG00005011442 ##29 ENSPCTG00005011455 ##35 ENSPCTG00005011469 #30 ENSPCTG00005011490 ##29 ENSPCTG00005011505 ##29 ENSPCTG00005011520 #30 ENSPCTG00005011537 #35 ENSPCTG00005011561 ENSPCTG00005011661 HJV (ENSPCTG00005011809) TXNIP (ENSPCTG00005011915) Blue whale MODERN SPECIES ENSBMSG00010014950 ECM1 (ENSBMSG00010014903) #7 TARS2 (ENSBMSG00010014680) #8 RPRD2 (ENSBMSG00010014508) #9 PRPF3 (ENSBMSG00010014445) #11 MRPS21 (ENSBMSG00010014420) #12 CIART (ENSBMSG00010014384) #13 C1orf54 (ENSBMSG00010014318) #14 ENSBMSG00010014245 #15 CA14 (ENSBMSG00010014191) #16 ANP32E (ENSBMSG00010014047) #17 PLEKHO1 (ENSBMSG00010013986) #18 VPS45 (ENSBMSG00010013898) #19 OTUD7B (ENSBMSG00010004006) #20 MTMR11 (ENSBMSG00010003964) #21 SF3B4 (ENSBMSG00010003943) #22 SV2A (ENSBMSG00010003927) #23 BOLA1 (ENSBMSG00010003920) #24 H2AC21 (ENSBMSG00010003913) #25 H2AC20 (ENSBMSG00010003906) #26 H2BC21 (ENSBMSG00010003899) #29 ENSBMSG00010003894 #35 ENSBMSG00010003888 #30 ENSBMSG00010003885 ##29 ENSBMSG00010003880 ##29 ENSBMSG00010003874 #30 ENSBMSG00010003866 #35 ENSBMSG00010003857 ##34 ENSBMSG00010003847 #35 H2BC18 (ENSBMSG00010003841) #36 ENSBMSG00010003827 Pecora ANCESTRAL SPECIES 2 ENSGT00940000161136 ENSGT00390000006215 #7 ENSGT00940000161600 #8 ENSGT00950000183094.a #9 ENSGT00390000011497 #11 ENSGT00500000045038 #12 ENSGT00390000018360 #13 ENSGT00390000003103 #14 ENSGT00390000002049.c.a #15 ENSGT00940000156893 #16 ENSGT00950000182907.a.a #17 ENSGT00530000063760.b #18 ENSGT00550000075028 #19 ENSGT00940000159172 #20 ENSGT00940000160276 #21 ENSGT00870000136537 #22 ENSGT00950000182940.b.a.b #23 ENSGT00510000048165 #24 ENSGT00940000153118.db.a.a.b.a.b #25 ENSGT00940000153118.db.a.a.b.a.a #26 ENSGT01100000263575.B.u #29 ENSGT01100000263559.A.f ##35 ENSGT00940000156302 #30 ENSGT01100000263474.a.b.a.d ENSGT01100000263506.a.e.b #36 ENSGT01050000244808.A.b.b.a #37 ENSGT00950000183190.a.b.a.b ENSGT00420000029746.f ENSGT00950000183112.b.b ENSGT00940000158522 ENSGT01060000248645 Yarkand deer DUPLICATION Yarkand deer MODERN SPECIES 12 ECM1 (ENSCHYG00000011225) #7 TARS2 (ENSCHYG00000011458) #8 RPRD2 (ENSCHYG00000012167) #9 PRPF3 (ENSCHYG00000012362) #11 ENSCHYG00000012484 #12 CIART (ENSCHYG00000012538) #13 C1orf54 (ENSCHYG00000012611) #14 APH1A (ENSCHYG00000012752) #15 CA14 (ENSCHYG00000012847) #16 ANP32E (ENSCHYG00000012932) #17 ENSCHYG00000013481 #18 VPS45 (ENSCHYG00000013592) #19 OTUD7B (ENSCHYG00000014204) #20 ENSCHYG00000014343 MTMR11 (ENSCHYG00000014428) #21 ENSCHYG00000014732 #22 SV2A (ENSCHYG00000014801) #23 BOLA1 (ENSCHYG00000014998) #24 H2AC21 (ENSCHYG00000015023) #25 H2AC20 (ENSCHYG00000015051) #26 H2BC21 (ENSCHYG00000015088) #29 ENSCHYG00000015117 ##34 H3-7 (ENSCHYG00000015151) ##35 H2BC18 (ENSCHYG00000015177) #36 ENSCHYG00000015246 FCGR1A (ENSCHYG00000015523) #37 ENSCHYG00000015606 HJV (ENSCHYG00000015634) TXNIP (ENSCHYG00000015719) POLR3GL (ENSCHYG00000015898) ANKRD34A (ENSCHYG00000015933) Yarkand deer MODERN SPECIES 14 TST (ENSCHYG00000012199) MPST (ENSCHYG00000012325) KCTD17 (ENSCHYG00000012353) TMPRSS6 (ENSCHYG00000012490) IL2RB (ENSCHYG00000012820) C1QTNF6 (ENSCHYG00000012911) SSTR3 (ENSCHYG00000012943) RAC2 (ENSCHYG00000012955) CYTH4 (ENSCHYG00000013017) MFNG (ENSCHYG00000013114) CARD10 (ENSCHYG00000013209) USP18 (ENSCHYG00000013490) ENSCHYG00000013690 SYT10 (ENSCHYG00000013779) ENSCHYG00000013851 ENSCHYG00000013913 #22 PKP2 (ENSCHYG00000013933) YARS2 (ENSCHYG00000014029) DNM1L (ENSCHYG00000014213) FGD4 (ENSCHYG00000016143) ENSCHYG00000016806 ENSCHYG00000004997 BICD1 (ENSCHYG00000005054) RESF1 (ENSCHYG00000005315) AMN1 (ENSCHYG00000005389) ENSCHYG00000005445 DENND5B (ENSCHYG00000005528) SINHCAF (ENSCHYG00000005811) CAPRIN2 (ENSCHYG00000005981) IPO8 (ENSCHYG00000006840) ENSCHYG00000007292 Percora_a ANCESTRAL SPECIES 1 ENSGT00940000161136 ENSGT00390000006215 #7 ENSGT00940000161600 #8 ENSGT00950000183094.a #9 ENSGT00390000011497 #11 ENSGT00500000045038 #12 ENSGT00390000018360 #13 ENSGT00390000003103 #14 ENSGT00390000002049.c.a #15 ENSGT00940000156893 #16 ENSGT00950000182907.a.a #17 ENSGT00530000063760.b #18 ENSGT00550000075028 #19 ENSGT00940000159172 #20 ENSGT00940000160276 #21 ENSGT00870000136537 #22 ENSGT00950000182940.b.a.b #23 ENSGT00510000048165 #24 ENSGT00940000153118.db.a.a.b.a.b #25 ENSGT00940000153118.db.a.a.b.a.a #26 ENSGT01100000263575.B.u #29 ENSGT01100000263559.A.f ##35 ENSGT00940000156302 #30 ENSGT01100000263474.a.b.a.d ENSGT01100000263506.a.e.b #36 ENSGT01050000244808.A.b.b.a #37 ENSGT00950000183190.a.b.a.b ENSGT00420000029746.f ENSGT00950000183112.b.b ENSGT00940000158522 ENSGT01060000248645 Bovidae DUPLICATION Bovidae ANCESTRAL SPECIES 1 ENSGT00940000161136 ENSGT00390000006215 #7 ENSGT00940000161600 #8 ENSGT00950000183094.a #9 ENSGT00390000011497 #11 ENSGT00500000045038 #12 ENSGT00390000018360 #13 ENSGT00390000003103 #14 ENSGT00390000002049.c.a #15 ENSGT00940000156893 #16 ENSGT00950000182907.a.a #17 ENSGT00530000063760.b #18 ENSGT00550000075028 #19 ENSGT00940000159172 #20 ENSGT00940000160276 #21 ENSGT00870000136537.i #22 ENSGT00950000182940.b.a.b #23 ENSGT00510000048165 #24 ENSGT00940000153118.db.a.a.b.a.b #25 ENSGT00940000153118.db.a.a.b.a.a #26 ENSGT01100000263575.B.u #29 ENSGT01100000263559.A.f ##35 ENSGT00940000156302 #30 ENSGT01100000263474.a.b.a.d ENSGT01060000248528.a.b.a.a.a.b ##34 ENSGT00940000164494 ENSGT01100000263569.a.b.b ENSGT01100000263559.B #35 ENSGT01060000248528.b.jh.b ##34 ENSGT01100000263514.A.e.a.a ENSGT01100000263506.a.e.b #36 Bovinae ANCESTRAL SPECIES 1 ENSGT00940000161136 ENSGT00390000006215 #7 ENSGT00940000161600 #8 ENSGT00950000183094.a #9 ENSGT00390000011497 #11 ENSGT00500000045038 #12 ENSGT00390000018360 #13 ENSGT00390000003103 #14 ENSGT00390000002049.c.a #15 ENSGT00940000156893 #16 ENSGT00950000182907.a.a #17 ENSGT00530000063760.b #18 ENSGT00550000075028 #19 ENSGT00940000159172 #20 ENSGT00940000160276 #21 ENSGT00870000136537.i #22 ENSGT00950000182940.b.a.b #23 ENSGT00510000048165 #24 ENSGT00940000153118.db.a.a.b.a.b #25 ENSGT00940000153118.db.a.a.b.a.a #26 ENSGT01100000263575.B.u #29 ENSGT01100000263559.A.f ##35 ENSGT00940000156302 #30 ENSGT01100000263506.a.e.a.a.a.a.b.a ##36 ENSGT01100000263506.a.e.b #36 ENSGT01050000244808.A.b.b.a #37 ENSGT00950000183190.a.b.a.b ENSGT00420000029746.f ENSGT00950000183112.b.b ENSGT00940000158522 ENSGT01060000248645 American bison MODERN SPECIES 3032 ADAMTSL4 (ENSBBBG00000008423) ECM1 (ENSBBBG00000023801) #7 TARS2 (ENSBBBG00000023752) #8 RPRD2 (ENSBBBG00000023635) #9 PRPF3 (ENSBBBG00000023595) #11 MRPS21 (ENSBBBG00000023564) #12 CIART (ENSBBBG00000023556) #13 C1orf54 (ENSBBBG00000008854) #14 APH1A (ENSBBBG00000023500) #15 CA14 (ENSBBBG00000023456) #16 ENSBBBG00000023424 #17 PLEKHO1 (ENSBBBG00000023413) #18 VPS45 (ENSBBBG00000023405) #19 OTUD7B (ENSBBBG00000023362) #20 MTMR11 (ENSBBBG00000023347) #21 ENSBBBG00000006102 #22 SV2A (ENSBBBG00000023321) #23 ENSBBBG00000023289 #24 ENSBBBG00000023283 #24 H2AC21 (ENSBBBG00000023276) #25 H2AC20 (ENSBBBG00000023272) #26 H2BC21 (ENSBBBG00000008849) #29 ENSBBBG00000008681 ##35 ENSBBBG00000023258 #30 ENSBBBG00000023255 ##36 ENSBBBG00000006078 ##36 ENSBBBG00000023206 #30 ENSBBBG00000023201 ##35 H4C15 (ENSBBBG00000023197) ##34 H3C13 (ENSBBBG00000023194) #35 H2BC18 (ENSBBBG00000023192) #36 Bos ANCESTRAL SPECIES ENSGT00390000006215 #7 ENSGT00940000161600 #8 ENSGT00950000183094.a #9 ENSGT01100000263480.a.a.b.a.b.b.b.b.b ENSGT00390000011497 #11 ENSGT00500000045038 #12 ENSGT00390000018360 #13 ENSGT00390000003103 #14 ENSGT00390000002049.c.a #15 ENSGT00940000156893 #16 ENSGT00950000182907.a.a #17 ENSGT00530000063760.b #18 ENSGT00550000075028 #19 ENSGT00940000159172 #20 ENSGT00940000160276 #21 ENSGT00870000136537.i #22 ENSGT00950000182940.b.a.b #23 ENSGT00510000048165 #24 ENSGT00940000153118.db.a.a.b.a.b #25 ENSGT01100000263575.B.u #29 ENSGT01100000263559.A.f ##35 ENSGT00940000156302 #30 ENSGT00940000153118.db.a.a.b.a.a #26 ENSGT01100000263506.a.e.b #36 ENSGT01050000244808.A.b.b.a #37 ENSGT00950000183190.a.b.a.b ENSGT00420000029746.f ENSGT00950000183112.b.b ENSGT00940000158522 ENSGT01060000248645 ENSGT00390000012355.B.b Bos_b ANCESTRAL SPECIES 1 ENSGT00390000006215 #7 ENSGT00940000161600 #8 ENSGT00950000183094.a #9 ENSGT01100000263480.a.a.b.a.b.b.b.b.b ENSGT00390000011497 #11 ENSGT00500000045038 #12 ENSGT00390000018360 #13 ENSGT00390000003103 #14 ENSGT00390000002049.c.a #15 ENSGT00940000156893 #16 ENSGT00950000182907.a.a #17 ENSGT00530000063760.b #18 ENSGT00550000075028 #19 ENSGT00940000159172 #20 ENSGT00940000160276 #21 ENSGT00870000136537.i #22 ENSGT00950000182940.b.a.b #23 ENSGT00510000048165 #24 ENSGT00940000153118.db.a.a.b.a.a #26 ENSGT00940000156302 #30 ENSGT01100000263559.A.f ##35 ENSGT01100000263506.a.e.b #36 ENSGT01050000244808.A.b.b.a #37 ENSGT00950000183190.a.b.a.b ENSGT00420000029746.f ENSGT00950000183112.b.b ENSGT00940000158522 ENSGT01060000248645 ENSGT00390000012355.B.b ENSGT00730000111185 ENSGT01050000244841.A.a.b Hybrid Bos Indicus MODERN SPECIES 22 ENSBIXG00005026789 ADAMTSL4 (ENSBIXG00005026752) TARS2 (ENSBIXG00005007645) #8 RPRD2 (ENSBIXG00005004524) #9 ENSBIXG00005026407 PRPF3 (ENSBIXG00005026388) #11 MRPS21 (ENSBIXG00005004483) #12 CIART (ENSBIXG00005026269) #13 APH1A (ENSBIXG00005026181) #15 CA14 (ENSBIXG00005004451) #16 ENSBIXG00005006696 #17 PLEKHO1 (ENSBIXG00005025976) #18 VPS45 (ENSBIXG00005025887) #19 OTUD7B (ENSBIXG00005025620) #20 MTMR11 (ENSBIXG00005004349) #21 ENSBIXG00005004342 #22 SV2A (ENSBIXG00005025476) #23 ENSBIXG00005025435 #24 H2AC20 (ENSBIXG00005025423) #26 ENSBIXG00005004318 ##36 H3-7 (ENSBIXG00005025404) ##35 ENSBIXG00005004313 ##34 H2BC18 (ENSBIXG00005025377) #36 FCGR1A (ENSBIXG00005025364) #37 ENSBIXG00005025348 ENSBIXG00005025317 ENSBIXG00005025301 HJV (ENSBIXG00005006687) TXNIP (ENSBIXG00005025179) POLR3GL (ENSBIXG00005025127) ANKRD34A (ENSBIXG00005025105) Cow MODERN SPECIES 22 ADAMTSL4 (ENSBTAG00000003604) ECM1 (ENSBTAG00000003806) #7 TARS2 (ENSBTAG00000003799) #8 RPRD2 (ENSBTAG00000014984) #9 PRPF3 (ENSBTAG00000013946) #11 MRPS21 (ENSBTAG00000024378) #12 CIART (ENSBTAG00000021487) #13 C3H1orf54 (ENSBTAG00000021485) #14 APH1A (ENSBTAG00000021482) #15 CA14 (ENSBTAG00000021481) #16 ANP32E (ENSBTAG00000016730) #17 PLEKHO1 (ENSBTAG00000004852) #18 VPS45 (ENSBTAG00000020635) #19 OTUD7B (ENSBTAG00000001586) #20 MTMR11 (ENSBTAG00000012496) #21 SF3B4 (ENSBTAG00000012495) #22 SV2A (ENSBTAG00000001599) #23 BOLA1 (ENSBTAG00000006050) #24 H2AC20 (ENSBTAG00000040098) H2AC21 (ENSBTAG00000032456) #25 ENSBTAG00000050122 #29 H2AC19 (ENSBTAG00000046003) #26 H4C14 (ENSBTAG00000032453) H2AC18 (ENSBTAG00000038476) #30 H3C13 (ENSBTAG00000050881) ##35 H2BC18 (ENSBTAG00000032455) #36 FCGR1A (ENSBTAG00000008592) #37 ENSBTAG00000037565 MGC134040 (ENSBTAG00000022741) HJV (ENSBTAG00000021823) TXNIP (ENSBTAG00000020060) Bos_a ANCESTRAL SPECIES 47 ENSGT00390000006215 #7 ENSGT00940000161600 #8 ENSGT00950000183094.a #9 ENSGT01100000263480.a.a.b.a.b.b.b.b.b ENSGT00390000011497 #11 ENSGT00500000045038 #12 ENSGT00390000018360 #13 ENSGT00390000003103 #14 ENSGT00390000002049.c.a #15 ENSGT00940000156893 #16 ENSGT00950000182907.a.a #17 ENSGT00530000063760.b #18 ENSGT00550000075028 #19 ENSGT00940000159172 #20 ENSGT00940000160276 #21 ENSGT00870000136537.i #22 ENSGT00950000182940.b.a.b #23 ENSGT00510000048165 #24 ENSGT00940000153118.db.a.a.b.a.b #25 ENSGT00940000153118.db.a.a.b.a.a #26 ENSGT01100000263575.B.u #29 ENSGT01100000263559.A.f ##35 ENSGT00940000156302 #30 Domestic yak MODERN SPECIES 22 ENSBGRG00000000495 RPRD2 (ENSBGRG00000000422) #9 ENSBGRG00000000401 PRPF3 (ENSBGRG00000000360) #11 MRPS21 (ENSBGRG00000000322) #12 CIART (ENSBGRG00000000285) #13 C1orf54 (ENSBGRG00000000272) #14 APH1A (ENSBGRG00000000249) #15 CA14 (ENSBGRG00000000220) #16 ENSBGRG00000017224 ENSBGRG00000017198 #17 PLEKHO1 (ENSBGRG00000017135) #18 VPS45 (ENSBGRG00000016926) #19 OTUD7B (ENSBGRG00000016856) #20 MTMR11 (ENSBGRG00000016764) #21 ENSBGRG00000016698 #22 SV2A (ENSBGRG00000016418) #23 ENSBGRG00000016367 H2AC21 (ENSBGRG00000016349) #25 H2AC20 (ENSBGRG00000016331) #26 H2BC21 (ENSBGRG00000016302) #29 ENSBGRG00000016266 ##35 ENSBGRG00000016242 #35 ENSBGRG00000016186 ##36 ENSBGRG00000016162 ##36 ENSBGRG00000016148 #30 ENSBGRG00000016136 ##35 ENSBGRG00000016114 ##35 H2BC18 (ENSBGRG00000016034) #36 FCGR1A (ENSBGRG00000015945) #37 ENSBGRG00000015767 Wild yak MODERN SPECIES 688 ADAMTSL4 (ENSBMUG00000023675) ECM1 (ENSBMUG00000023627) #7 TARS2 (ENSBMUG00000023540) #8 RPRD2 (ENSBMUG00000023488) #9 PRPF3 (ENSBMUG00000023465) #11 MRPS21 (ENSBMUG00000023447) #12 CIART (ENSBMUG00000023439) #13 C1orf54 (ENSBMUG00000023423) #14 APH1A (ENSBMUG00000023411) #15 CA14 (ENSBMUG00000023394) #16 ENSBMUG00000023376 #17 PLEKHO1 (ENSBMUG00000023366) #18 VPS45 (ENSBMUG00000023335) #19 OTUD7B (ENSBMUG00000023313) #20 MTMR11 (ENSBMUG00000023303) #21 ENSBMUG00000023291 #22 SV2A (ENSBMUG00000023283) #23 BOLA1 (ENSBMUG00000023276) #24 H2AC21 (ENSBMUG00000023258) #25 ENSBMUG00000023246 ##25 Caprinae ANCESTRAL SPECIES 2 ENSGT00940000161136 ENSGT00390000006215 #7 ENSGT00940000161600 #8 ENSGT00950000183094.a #9 ENSGT00390000011497 #11 ENSGT00500000045038 #12 ENSGT00390000018360 #13 ENSGT00390000003103 #14 ENSGT00390000002049.c.a #15 ENSGT00940000156893 #16 ENSGT00950000182907.a.a #17 ENSGT00530000063760.b #18 ENSGT00550000075028 #19 ENSGT00940000159172 #20 ENSGT00940000160276 #21 ENSGT00870000136537.i #22 ENSGT00950000182940.b.a.b #23 ENSGT00510000048165 #24 ENSGT00940000153118.db.a.a.b.a.b #25 ENSGT00940000153118.db.a.a.b.a.a #26 ENSGT01100000263575.B.u #29 ENSGT01100000263559.B #35 ENSGT01100000263506.a.e.b #36 ENSGT01050000244808.A.b.b.a #37 ENSGT00950000183190.a.b.a.b ENSGT00420000029746.f ENSGT00950000183112.b.b ENSGT00940000158522 ENSGT01060000248645 ENSGT00390000012355.B.b ENSGT00390000005869.a Goat MODERN SPECIES 22 ENSCHIG00000011166 ENSCHIG00000025006 ECM1 (ENSCHIG00000010881) #7 TARS2 (ENSCHIG00000018559) #8 RPRD2 (ENSCHIG00000023733) #9 PRPF3 (ENSCHIG00000015434) #11 MRPS21 (ENSCHIG00000021516) #12 CIART (ENSCHIG00000001297) #13 APH1A (ENSCHIG00000015526) #15 CA14 (ENSCHIG00000024032) #16 ANP32E (ENSCHIG00000002759) #17 PLEKHO1 (ENSCHIG00000022413) #18 VPS45 (ENSCHIG00000010595) #19 OTUD7B (ENSCHIG00000020643) #20 MTMR11 (ENSCHIG00000021928) #21 ENSCHIG00000025663 #22 SV2A (ENSCHIG00000017231) #23 BOLA1 (ENSCHIG00000023087) #24 H2AC21 (ENSCHIG00000006209) #25 H2AC20 (ENSCHIG00000010392) #26 H2BC21 (ENSCHIG00000012955) #29 ENSCHIG00000010054 #35 ENSCHIG00000022263 #26 ENSCHIG00000007823 #29 ENSCHIG00000013722 #29 ENSCHIG00000008044 #26 ENSCHIG00000013241 ##35 ENSCHIG00000009699 ##34 ENSCHIG00000010234 ##35 H2BC18 (ENSCHIG00000007673) #36 FCGR1A (ENSCHIG00000027141) #37 Rambouillet Sheep MODERN SPECIES ADAMTSL4 (ENSOARG00020008616) ECM1 (ENSOARG00020008539) #7 TARS2 (ENSOARG00020008324) #8 RPRD2 (ENSOARG00020008088) #9 PRPF3 (ENSOARG00020007961) #11 MRPS21 (ENSOARG00020007924) #12 CIART (ENSOARG00020007852) #13 C1orf54 (ENSOARG00020007824) #14 APH1A (ENSOARG00020007706) #15 CA14 (ENSOARG00020007644) #16 ENSOARG00020007614 #17 PLEKHO1 (ENSOARG00020007594) #18 VPS45 (ENSOARG00020007445) #19 OTUD7B (ENSOARG00020007348) #20 MTMR11 (ENSOARG00020007236) #21 SF3B4 (ENSOARG00020007183) #22 SV2A (ENSOARG00020007009) #23 BOLA1 (ENSOARG00020006951) #24 HIST2H2AB (ENSOARG00020006921) #25 HIST2H2AC (ENSOARG00020006891) #26 HIST2H2BE (ENSOARG00020006877) #29 ENSOARG00020006850 #35 ENSOARG00020006832 #30 ENSOARG00020006810 ENSOARG00020006796 #29 ENSOARG00020006772 #30 ENSOARG00020006745 ##35 ENSOARG00020006725 ##34 H3-7 (ENSOARG00020006703) ##35 H2BC18 (ENSOARG00020006656) #36 FCGR1A (ENSOARG00020006588) #37 Bovidae ANCESTRAL SPECIES ENSGT00870000136537.j #22 Bovinae ANCESTRAL SPECIES 10 ENSGT00880000138031 ENSGT00940000158187 ENSGT00940000158037 ENSGT00940000159389 ENSGT00940000158600 ENSGT00940000155166.A ENSGT00390000016813 ENSGT00940000155118.o ENSGT00940000154612.m.a.c ENSGT00940000155067.a ENSGT00940000158254 ENSGT00950000183117.a.a ENSGT00390000000062.x.a ENSGT00390000006747 ENSGT01030000234578.B.a ENSGT00870000136537.j #22 ENSGT00390000014084.z ENSGT00550000074935.z ENSGT00390000010777 ENSGT00390000006088 ENSGT00390000004984 ENSGT00960000189116 ENSGT00940000159081 ENSGT00950000182885.B ENSGT00940000162483 ENSGT00940000156566 ENSGT00940000158637 ENSGT00530000064216 ENSGT01020000230401.b.a ENSGT00390000007685 ENSGT00390000000987 American bison MODERN SPECIES 3241 ANO4 (ENSBBBG00000001376) SLC5A8 (ENSBBBG00000001338) UTP20 (ENSBBBG00000001252) ARL1 (ENSBBBG00000015342) ENSBBBG00000003821 SPIC (ENSBBBG00000015354) MYBPC1 (ENSBBBG00000015658) CHPT1 (ENSBBBG00000015683) SYCP3 (ENSBBBG00000002637) GNPTAB (ENSBBBG00000015731) DRAM1 (ENSBBBG00000015747) ENSBBBG00000015751 #22 WASHC3 (ENSBBBG00000015771) ENSBBBG00000015783 NUP37 (ENSBBBG00000015803) PARPBP (ENSBBBG00000003942) PMCH (ENSBBBG00000015856) ENSBBBG00000015861 IGF1 (ENSBBBG00000015932) PAH (ENSBBBG00000015967) ASCL1 (ENSBBBG00000003978) STAB2 (ENSBBBG00000003988) NT5DC3 (ENSBBBG00000016072) ENSBBBG00000016093 HSP90B1 (ENSBBBG00000016125) UQCC6 (ENSBBBG00000016141) TDG (ENSBBBG00000016156) Bos ANCESTRAL SPECIES 2 ENSGT00880000138031 ENSGT00940000158187 ENSGT00940000158037 ENSGT00940000159389 ENSGT00940000158600.d ENSGT00940000155166.A ENSGT00390000016813 ENSGT00940000155118.o ENSGT00940000154612.m.a.c ENSGT00940000155067.a ENSGT00940000158254 ENSGT00950000183117.a.a ENSGT00390000000062.x.a ENSGT00390000006747 ENSGT01030000234578.B.a ENSGT00870000136537.j #22 ENSGT00390000014084.z ENSGT00550000074935.z ENSGT00390000010777 ENSGT00390000006088 ENSGT00390000004984.d ENSGT00960000189116 ENSGT00940000159081 ENSGT00950000182885.B ENSGT00940000162483 ENSGT00940000156566 ENSGT00940000158637 ENSGT00530000064216 ENSGT01020000230401.b.a ENSGT00390000007685 ENSGT00390000000987 Bos_a ANCESTRAL SPECIES 3 ENSGT00880000138031 ENSGT00940000158187 ENSGT00940000158037 ENSGT00940000159389 ENSGT00940000158600.d ENSGT00940000155166.A ENSGT00390000016813 ENSGT00940000155118.o ENSGT00940000154612.m.a.c ENSGT00940000155067.a ENSGT00940000158254 ENSGT00950000183117.a.a ENSGT00390000000062.x.a ENSGT00390000006747 ENSGT01030000234578.B.a ENSGT00870000136537.j #22 ENSGT00390000014084.z ENSGT00550000074935.z ENSGT00390000010777 ENSGT00390000006088 ENSGT00390000004984.d ENSGT00960000189116 ENSGT00940000159081 ENSGT00950000182885.B ENSGT00940000162483 ENSGT00940000156566 ENSGT00940000158637 ENSGT00530000064216 ENSGT01020000230401.b.a ENSGT00390000007685 ENSGT00390000000987 Wild yak MODERN SPECIES 1023 SLC5A8 (ENSBMUG00000009096) UTP20 (ENSBMUG00000009150) ARL1 (ENSBMUG00000009188) ENSBMUG00000009199 ENSBMUG00000009206 MYBPC1 (ENSBMUG00000009435) CHPT1 (ENSBMUG00000009579) SYCP3 (ENSBMUG00000009634) GNPTAB (ENSBMUG00000009686) DRAM1 (ENSBMUG00000009731) ENSBMUG00000009753 #22 WASHC3 (ENSBMUG00000009774) NUP37 (ENSBMUG00000009802) ENSBMUG00000009814 PARPBP (ENSBMUG00000009860) PMCH (ENSBMUG00000009881) ENSBMUG00000009885 IGF1 (ENSBMUG00000009930) PAH (ENSBMUG00000009991) Domestic yak MODERN SPECIES 24 SLC17A8 (ENSBGRG00000003178) ENSBGRG00000003155 NR1H4 (ENSBGRG00000003123) GAS2L3 (ENSBGRG00000003088) ANO4 (ENSBGRG00000002904) SLC5A8 (ENSBGRG00000002819) UTP20 (ENSBGRG00000002781) ARL1 (ENSBGRG00000002671) ENSBGRG00000002653 ENSBGRG00000002632 MYBPC1 (ENSBGRG00000001036) CHPT1 (ENSBGRG00000000795) SYCP3 (ENSBGRG00000000767) GNPTAB (ENSBGRG00000000629) DRAM1 (ENSBGRG00000000571) ENSBGRG00000000545 #22 WASHC3 (ENSBGRG00000000463) ENSBGRG00000000441 NUP37 (ENSBGRG00000000415) PARPBP (ENSBGRG00000000381) PMCH (ENSBGRG00000000355) ENSBGRG00000000346 IGF1 (ENSBGRG00000000290) PAH (ENSBGRG00000021190) ENSBGRG00000021133 ENSBGRG00000021085 ENSBGRG00000021065 STAB2 (ENSBGRG00000020546) NT5DC3 (ENSBGRG00000020334) ENSBGRG00000020117 HSP90B1 (ENSBGRG00000020036) Bos_b ANCESTRAL SPECIES 22 ENSGT00880000138031 ENSGT00940000158187 ENSGT00940000158037 ENSGT00940000159389 ENSGT00940000158600.d ENSGT00940000155166.A ENSGT00390000016813 ENSGT00940000155118.o ENSGT00940000154612.m.a.c ENSGT00940000155067.a ENSGT00940000158254 ENSGT00950000183117.a.a ENSGT00390000000062.x.a ENSGT00390000006747 ENSGT01030000234578.B.a ENSGT00870000136537.j #22 ENSGT00390000014084.z ENSGT00550000074935.z ENSGT00390000010777 ENSGT00390000006088 ENSGT00390000004984.d ENSGT00960000189116 ENSGT00940000159081 ENSGT00950000182885.B ENSGT00940000162483 ENSGT00940000156566 ENSGT00940000158637 ENSGT00530000064216 ENSGT01020000230401.b.a ENSGT00390000007685 ENSGT00390000000987 Cow MODERN SPECIES 24 SLC17A8 (ENSBTAG00000001088) NR1H4 (ENSBTAG00000013596) GAS2L3 (ENSBTAG00000049308) ANO4 (ENSBTAG00000004145) SLC5A8 (ENSBTAG00000011525) UTP20 (ENSBTAG00000003239) ARL1 (ENSBTAG00000011883) ENSBTAG00000008020 SPIC (ENSBTAG00000009904) MYBPC1 (ENSBTAG00000011392) ENSBTAG00000048643 CHPT1 (ENSBTAG00000002490) SYCP3 (ENSBTAG00000002492) GNPTAB (ENSBTAG00000019409) DRAM1 (ENSBTAG00000017287) ENSBTAG00000012793 #22 WASHC3 (ENSBTAG00000000021) NUP37 (ENSBTAG00000000022) PARPBP (ENSBTAG00000039709) PMCH (ENSBTAG00000013008) ENSBTAG00000051413 IGF1 (ENSBTAG00000011082) ENSBTAG00000049055 PAH (ENSBTAG00000012794) ASCL1 (ENSBTAG00000016227) STAB2 (ENSBTAG00000006010) NT5DC3 (ENSBTAG00000006013) TTC41 (ENSBTAG00000027899) HSP90B1 (ENSBTAG00000003362) UQCC6 (ENSBTAG00000048280) TDG (ENSBTAG00000021633) Hybrid Bos Indicus MODERN SPECIES 24 ANO4 (ENSBIXG00005003189) ENSBIXG00005019628 SLC5A8 (ENSBIXG00005019682) ENSBIXG00005019697 UTP20 (ENSBIXG00005003225) ARL1 (ENSBIXG00005019884) ENSBIXG00005003254 SPIC (ENSBIXG00005019938) ENSBIXG00005019949 MYBPC1 (ENSBIXG00005020157) CHPT1 (ENSBIXG00005020232) SYCP3 (ENSBIXG00005003378) ENSBIXG00005020255 GNPTAB (ENSBIXG00005020278) DRAM1 (ENSBIXG00005020313) ENSBIXG00005003426 #22 WASHC3 (ENSBIXG00005020384) ENSBIXG00005020399 NUP37 (ENSBIXG00005003453) PARPBP (ENSBIXG00005020483) ENSBIXG00005020521 ENSBIXG00005020545 IGF1 (ENSBIXG00005007345) PAH (ENSBIXG00005007158) ASCL1 (ENSBIXG00005021003) STAB2 (ENSBIXG00005021254) NT5DC3 (ENSBIXG00005021303) ENSBIXG00005021359 HSP90B1 (ENSBIXG00005021407) UQCC6 (ENSBIXG00005021438) TDG (ENSBIXG00005021462) Caprinae ANCESTRAL SPECIES ENSGT00870000136537.j #22 Goat MODERN SPECIES 17 ENSCHIG00000010110 CEP20 (ENSCHIG00000024326) MYH11 (ENSCHIG00000010603) NDE1 (ENSCHIG00000023722) MARF1 (ENSCHIG00000008560) BMERB1 (ENSCHIG00000018943) MPV17L (ENSCHIG00000022987) PDXDC1 (ENSCHIG00000009960) ENSCHIG00000014915 RRN3 (ENSCHIG00000014990) ENSCHIG00000015259 PLA2G10 (ENSCHIG00000011377) BFAR (ENSCHIG00000014101) PARN (ENSCHIG00000018143) MRTFB (ENSCHIG00000018957) ENSCHIG00000006654 #22 ERCC4 (ENSCHIG00000022561) SHISA9 (ENSCHIG00000008483) CPPED1 (ENSCHIG00000019325) ENSCHIG00000026229 SNX29 (ENSCHIG00000022008) ENSCHIG00000023282 TNFRSF17 (ENSCHIG00000014875) GSPT1 (ENSCHIG00000009274) ENSCHIG00000018658 ENSCHIG00000007743 ZC3H7A (ENSCHIG00000006568) TXNDC11 (ENSCHIG00000019483) SNN (ENSCHIG00000011379) ENSCHIG00000002368 LITAF (ENSCHIG00000014017) Siberian musk deer MODERN SPECIES 247 ADAMTSL4 (ENSMMSG00000019809) ECM1 (ENSMMSG00000019915) #7 TARS2 (ENSMMSG00000019987) #8 RPRD2 (ENSMMSG00000020110) #9 PRPF3 (ENSMMSG00000020222) #11 MRPS21 (ENSMMSG00000020328) #12 CIART (ENSMMSG00000020350) #13 C1orf54 (ENSMMSG00000020377) #14 APH1A (ENSMMSG00000020404) #15 CA14 (ENSMMSG00000020490) #16 ANP32E (ENSMMSG00000020532) #17 PLEKHO1 (ENSMMSG00000020759) #18 VPS45 (ENSMMSG00000020801) #19 OTUD7B (ENSMMSG00000020949) #20 MTMR11 (ENSMMSG00000020972) #21 SF3B4 (ENSMMSG00000021043) #22 SV2A (ENSMMSG00000021080) #23 BOLA1 (ENSMMSG00000021162) #24 H2AC21 (ENSMMSG00000021172) #25 H2AC20 (ENSMMSG00000021185) #26 H2BC21 (ENSMMSG00000021195) #29 ENSMMSG00000021208 ##35 ENSMMSG00000013230 #30 ENSMMSG00000013235 ##36 ENSMMSG00000013242 ##34 H3-7 (ENSMMSG00000013251) ##35 H2BC18 (ENSMMSG00000013260) #36 ENSMMSG00000013270 ENSMMSG00000013282 #37 ENSMMSG00000013290 ENSMMSG00000013298 Camelidae ANCESTRAL SPECIES 6 ENSGT00940000161136 ENSGT00390000006215 #7 ENSGT00940000161600 #8 ENSGT00950000183094.a #9 ENSGT00390000011497 #11 ENSGT00500000045038 #12 ENSGT00390000018360 #13 ENSGT00390000003103 #14 ENSGT00390000002049.c.a #15 ENSGT00940000156893 #16 ENSGT00950000182907.a.a #17 ENSGT00530000063760.b #18 ENSGT00550000075028 #19 ENSGT00940000159172 #20 ENSGT00940000160276 #21 ENSGT00870000136537 #22 ENSGT00950000182940.b.a.b #23 ENSGT00510000048165 #24 ENSGT00940000153118.db.a.a.b.a.b #25 ENSGT00940000153118.db.a.a.b.a.a #26 ENSGT01100000263506.a.e.a.a.a.a.a.b ##36 ENSGT01100000263559.B #35 ENSGT01100000263559.A.f ##35 ENSGT01100000263506.a.e.b #36 ENSGT01050000244808.A.b.b.a #37 ENSGT00950000183190.a.b.a.b ENSGT00420000029746.f ENSGT00950000183112.b.b ENSGT00940000158522 ENSGT01060000248645 ENSGT00390000012355.B.b Arabian camel MODERN SPECIES 13 ADAMTSL4 (ENSCDRG00005017304) ECM1 (ENSCDRG00005017209) #7 TARS2 (ENSCDRG00005017096) #8 RPRD2 (ENSCDRG00005016821) #9 PRPF3 (ENSCDRG00005016744) #11 ENSCDRG00005016696 #12 CIART (ENSCDRG00005016658) #13 ENSCDRG00005016574 #14 APH1A (ENSCDRG00005016465) #15 CA14 (ENSCDRG00005016386) #16 ANP32E (ENSCDRG00005016234) #17 PLEKHO1 (ENSCDRG00005016174) #18 VPS45 (ENSCDRG00005016029) #19 OTUD7B (ENSCDRG00005015982) #20 MTMR11 (ENSCDRG00005015753) #21 SF3B4 (ENSCDRG00005015698) #22 SV2A (ENSCDRG00005015609) #23 BOLA1 (ENSCDRG00005015588) #24 H2AC21 (ENSCDRG00005015577) #25 H2AC20 (ENSCDRG00005015569) #26 ENSCDRG00005015337 #29 ENSCDRG00005015322 ##36 ENSCDRG00005015313 #35 ENSCDRG00005015303 ##34 ENSCDRG00005015297 #35 H2BC18 (ENSCDRG00005015267) #36 FCGR1A (ENSCDRG00005015157) #37 ENSCDRG00005015110 ENSCDRG00005015029 HJV (ENSCDRG00005014941) TXNIP (ENSCDRG00005014863) Alpaca MODERN SPECIES 2205 ENSVPAG00000008154 #21 SF3B4 (ENSVPAG00000008152) #22 SV2A (ENSVPAG00000008149) #23 BOLA1 (ENSVPAG00000008148) #24 H2AC21 (ENSVPAG00000008146) #25 Euarchontoglires ANCESTRAL SPECIES ENSGT00940000161136 ENSGT00390000006215 #7 ENSGT00940000161600 #8 ENSGT00950000183094.a #9 ENSGT00390000011497 #11 ENSGT00500000045038 #12 ENSGT00390000018360 #13 ENSGT00390000003103 #14 ENSGT00390000002049.c.a #15 ENSGT00940000156893 #16 ENSGT00950000182907.a.a #17 ENSGT00530000063760.b #18 ENSGT00550000075028 #19 ENSGT00940000159172 #20 ENSGT00940000160276 #21 ENSGT00870000136537 #22 ENSGT00950000182940.b.a.b #23 ENSGT00510000048165 #24 ENSGT00940000153118.db.a.a.b.a.b #25 ENSGT00940000153118.db.a.a.b.a.a #26 ENSGT01100000263474.a.b.b.e.a.a.b ENSGT01100000263506.a.e.a.a.a.b.a.a.b.a.a ##36 ENSGT01060000248528.b.jh.a.a.b ##34 ENSGT01100000263514.A.e.a.b.b ENSGT01100000263506.a.e.a.a.a.a.a ##36 ENSGT01100000263567.a.a ENSGT01100000263506.a.e.a.a.a.b.b.a.a.a ##36 ENSGT01100000263506.a.e.a.a.a.b.a.a.b.a.b.a.a.b ##36 ENSGT00940000153125.D.a.a ENSGT01100000263514.A.e.a.b.a.b.a.a.a.b.a.b ENSGT01020000230360.c.b.a.b.a.b Primates ANCESTRAL SPECIES 7 ENSGT00940000161136 ENSGT00390000006215 #7 ENSGT00940000161600 #8 ENSGT00950000183094.a #9 ENSGT00390000011497 #11 ENSGT00500000045038 #12 ENSGT00390000018360 #13 ENSGT00390000003103 #14 ENSGT00390000002049.c.a #15 ENSGT00940000156893 #16 ENSGT00950000182907.a.a #17 ENSGT00530000063760.b #18 ENSGT00550000075028 #19 ENSGT00940000159172 #20 ENSGT00940000160276 #21 ENSGT00870000136537 #22 ENSGT00950000182940.b.a.b #23 ENSGT00510000048165 #24 ENSGT00940000153118.db.a.a.b.a.b #25 ENSGT00940000153118.db.a.a.b.a.a #26 ENSGT01100000263474.a.b.b.e.a.a.b ENSGT01100000263506.a.e.a.a.a.b.a.a.b.a.a ##36 ENSGT01060000248528.b.jh.b ##34 ENSGT01100000263514.A.e.a.b.a.b.a.a.a.a ENSGT00940000153092.a.a.c.a.a ENSGT01100000263575.A #31 ENSGT00940000156302 #30 ENSGT01100000263559.B #35 ENSGT01100000263506.a.e.a.b ##36 ENSGT01100000263559.A.f.e ##35 ENSGT01100000263506.a.e.b #36 Haplorrhini ANCESTRAL SPECIES 7 ENSGT00940000161136 ENSGT00390000006215 #7 ENSGT00940000161600 #8 ENSGT00950000183094.a #9 ENSGT00390000011497 #11 ENSGT00500000045038 #12 ENSGT00390000018360 #13 ENSGT00390000003103 #14 ENSGT00390000002049.c.a #15 ENSGT00940000156893 #16 ENSGT00950000182907.a.a #17 ENSGT00530000063760.b #18 ENSGT00550000075028 #19 ENSGT00940000159172 #20 ENSGT00940000160276 #21 ENSGT00870000136537 #22 ENSGT00950000182940.b.a.b #23 ENSGT00510000048165 #24 ENSGT00940000153118.db.a.a.b.a.b #25 ENSGT00940000153118.db.a.a.b.a.a #26 ENSGT01100000263575.B.t.a.b ##29 ENSGT01100000263506.a.e.b #36 ENSGT01050000244808.A.b.b.a #37 ENSGT00950000183190.a.b.a.b ENSGT00420000029746.f ENSGT00950000183112.b.b ENSGT00940000158522 ENSGT01060000248645 ENSGT00390000012355.B.b ENSGT00390000005869.a ENSGT00730000111185 Simiiformes ANCESTRAL SPECIES 8 ENSGT00910000147146 ENSGT00390000006215 #7 ENSGT00940000161600 #8 ENSGT00950000183094.a #9 ENSGT00390000011497 #11 ENSGT00500000045038.y.b #12 ENSGT00390000018360 #13 ENSGT00390000003103 #14 ENSGT00390000002049.c.a #15 ENSGT00940000156893 #16 ENSGT00950000182907.a.a #17 ENSGT00530000063760.b #18 ENSGT00550000075028 #19 ENSGT00940000159172 #20 ENSGT00940000160276 #21 ENSGT00870000136537 #22 ENSGT00950000182940.b.a.b #23 ENSGT00510000048165 #24 ENSGT00940000153118.db.a.a.b.a.b #25 ENSGT00940000153118.db.a.a.b.a.a #26 ENSGT01100000263575.B.t.a.b ##29 ENSGT01100000263506.a.e.b #36 ENSGT01050000244808.A.b.b.a #37 ENSGT00420000029746.f.c ENSGT00950000183112.b.b ENSGT00940000158522 ENSGT01060000248645 ENSGT00390000012355.B.b ENSGT00390000005869.a ENSGT00730000111185 ENSGT01050000244841.A.a.b Catarrhini DUPLICATION Catarrhini ANCESTRAL SPECIES 10 ENSGT00910000147146 ENSGT00390000006215 #7 ENSGT00940000161600 #8 ENSGT00950000183094.a #9 ENSGT00390000011497 #11 ENSGT00500000045038.y.b.a.a #12 ENSGT00390000018360 #13 ENSGT00390000003103 #14 ENSGT00390000002049.c.a #15 ENSGT00940000156893 #16 ENSGT00950000182907.a.a #17 ENSGT00530000063760.b #18 ENSGT00550000075028 #19 ENSGT00940000159172 #20 ENSGT00940000160276 #21 ENSGT00870000136537.m #22 ENSGT00950000182940.b.a.b #23 ENSGT00510000048165 #24 ENSGT00940000153118.db.a.a.b.a.b #25 ENSGT00940000153118.db.a.a.b.a.a #26 ENSGT01100000263575.A #31 ENSGT00940000153092.a.a.c.a.a ENSGT01100000263514.A.e.a.b.a.b.a.a.a.b.a.b ENSGT01020000230360.c.b.a.b.a.b ENSGT01060000248528.b.kh.yb.b.b.b.b ##34 ENSGT01100000263514.A.e.a.a ENSGT01060000248528.b.jh.b ##34 ENSGT01100000263559.A.f.e ##35 ENSGT01100000263506.a.e.b #36 ENSGT01050000244808.A.b.b.a #37 ENSGT00940000160915.e.b Cercopithecidae ANCESTRAL SPECIES 22 ENSGT00910000147146 ENSGT00390000006215 #7 ENSGT00940000161600 #8 ENSGT00950000183094.a #9 ENSGT00390000011497 #11 ENSGT00500000045038.y.b.b #12 ENSGT00390000018360 #13 ENSGT00390000003103 #14 ENSGT00390000002049.c.a #15 ENSGT00940000156893 #16 ENSGT00950000182907.a.a #17 ENSGT00530000063760.b #18 ENSGT00550000075028 #19 ENSGT00940000159172 #20 ENSGT00940000160276 #21 ENSGT00870000136537.m #22 ENSGT00950000182940.b.a.b #23 ENSGT00510000048165 #24 ENSGT00940000153118.db.a.a.b.a.b #25 ENSGT00940000153118.db.a.a.b.a.a #26 ENSGT01100000263575.B.t.a.b ##29 ENSGT01100000263506.a.e.b #36 ENSGT01050000244808.A.b.b.a #37 ENSGT00940000160915.e.b ENSGT00950000183190.a.b.a.b ENSGT00950000183112.b.b ENSGT00940000158522 ENSGT01060000248645 ENSGT00390000012355.B.b ENSGT00390000005869.a ENSGT00730000111185 Cercopithecinae ANCESTRAL SPECIES ENSGT00940000161136 ENSGT00390000006215 #7 ENSGT00940000161600 #8 ENSGT00950000183094.a #9 ENSGT00390000011497 #11 ENSGT00500000045038.y.b.b #12 ENSGT00390000018360 #13 ENSGT00390000003103 #14 ENSGT00390000002049.c.a #15 ENSGT00940000156893 #16 ENSGT00950000182907.a.a #17 ENSGT00530000063760.b #18 ENSGT00550000075028 #19 ENSGT00940000159172 #20 ENSGT00940000160276 #21 ENSGT00870000136537.m #22 ENSGT00950000182940.b.a.b #23 ENSGT00510000048165 #24 ENSGT00940000153118.db.a.a.b.a.b #25 ENSGT00940000153118.db.a.a.b.a.a #26 ENSGT01100000263575.B.t.a.b ##29 ENSGT01060000248528.b.kh.yb.b.a.lb.a ##34 ENSGT01100000263559.A.f.e ##35 ENSGT01100000263506.a.e.b #36 ENSGT01050000244808.A.b.b.a #37 ENSGT00420000029746.f.c.b ENSGT00910000147134 ENSGT01050000244864.D ENSGT01030000234531.A.b.b.b.b.b.e.b.a ENSGT01050000244864.C ENSGT00940000158408 Cercopithecinae_a ANCESTRAL SPECIES ENSGT00940000161136 ENSGT00390000006215 #7 ENSGT00940000161600 #8 ENSGT00950000183094.a #9 ENSGT00390000011497 #11 ENSGT00500000045038.y.b.b #12 ENSGT00390000018360 #13 ENSGT00390000003103 #14 ENSGT00390000002049.c.a #15 ENSGT00940000156893 #16 ENSGT00950000182907.a.a #17 ENSGT00530000063760.b #18 ENSGT00550000075028 #19 ENSGT00940000159172 #20 ENSGT00940000160276 #21 ENSGT00870000136537.m #22 ENSGT00950000182940.b.a.b #23 ENSGT00510000048165 #24 ENSGT00940000153118.db.a.a.b.a.b #25 ENSGT00940000153118.db.a.a.b.a.a #26 ENSGT01100000263575.B.t.a.b ##29 ENSGT01060000248528.b.kh.yb.b.a.lb.a ##34 ENSGT01100000263559.A.f.e ##35 ENSGT01100000263506.a.e.b #36 ENSGT01050000244808.A.b.b.a #37 ENSGT00940000160915.e.b ENSGT00950000183190.a.b.a.b ENSGT00420000029746.f.c.b.a ENSGT00390000009543.d ENSGT00420000029746.f.c.a ENSGT00420000029746.f.c.b.b Cercopithecinae_b ANCESTRAL SPECIES 3 ENSGT00940000161136 ENSGT00390000006215 #7 ENSGT00940000161600 #8 ENSGT00950000183094.a #9 ENSGT00390000011497 #11 ENSGT00500000045038.y.b.b #12 ENSGT00390000018360 #13 ENSGT00390000003103 #14 ENSGT00390000002049.c.a #15 ENSGT00940000156893 #16 ENSGT00950000182907.a.a #17 ENSGT00530000063760.b #18 ENSGT00550000075028 #19 ENSGT00940000159172 #20 ENSGT00940000160276 #21 ENSGT00870000136537.m #22 ENSGT00950000182940.b.a.b #23 ENSGT00510000048165 #24 ENSGT00940000153118.db.a.a.b.a.b #25 ENSGT00940000153118.db.a.a.b.a.a #26 ENSGT01100000263575.B.t.a.b ##29 ENSGT00940000156302 #30 ENSGT01100000263559.B #35 ENSGT01100000263506.a.e.b #36 ENSGT01050000244808.A.b.b.a #37 ENSGT00940000160915.e.b ENSGT00950000183190.a.b.a.b ENSGT00420000029746.f.c.b.a ENSGT00390000009543.d ENSGT00420000029746.f.c.a ENSGT00420000029746.f.c.b.b Olive baboon MODERN SPECIES ADAMTSL4 (ENSPANG00000011009) ECM1 (ENSPANG00000006364) #7 TARS2 (ENSPANG00000016774) #8 RPRD2 (ENSPANG00000019137) #9 PRPF3 (ENSPANG00000000499) #11 MRPS21 (ENSPANG00000030104) #12 CIART (ENSPANG00000034379) #13 C1orf54 (ENSPANG00000033401) #14 APH1A (ENSPANG00000008739) #15 CA14 (ENSPANG00000012135) #16 ANP32E (ENSPANG00000032905) #17 PLEKHO1 (ENSPANG00000007434) #18 VPS45 (ENSPANG00000012294) #19 OTUD7B (ENSPANG00000009169) #20 MTMR11 (ENSPANG00000020583) #21 SF3B4 (ENSPANG00000005126) #22 SV2A (ENSPANG00000008740) #23 BOLA1 (ENSPANG00000005165) #24 H2AC21 (ENSPANG00000048915) #25 H2BC21 (ENSPANG00000043204) #29 ENSPANG00000033703 ##34 H2AC20 (ENSPANG00000040460) #26 ENSPANG00000049378 #30 H3C13 (ENSPANG00000045449) #35 H2BC18 (ENSPANG00000040080) #36 FCGR1A (ENSPANG00000001763) #37 ENSPANG00000002791 ENSPANG00000036881 ENSPANG00000037189 ENSPANG00000012430 ENSPANG00000037273 Cercopithecinae_d ANCESTRAL SPECIES 29 ENSGT01090000260003.a.b.b.a.a.a.b.b ENSGT00940000161136 ENSGT00390000006215 #7 ENSGT00940000161600 #8 ENSGT00950000183094.a #9 ENSGT00390000011497 #11 ENSGT00390000018360 #13 ENSGT00390000003103 #14 ENSGT00390000002049.c.a #15 ENSGT00940000156893 #16 ENSGT00950000182907.a.a #17 ENSGT00530000063760.b #18 ENSGT00550000075028 #19 ENSGT00940000159172 #20 ENSGT00940000160276 #21 ENSGT00870000136537.m #22 ENSGT00950000182940.b.a.b #23 ENSGT00510000048165 #24 ENSGT00940000153118.db.a.a.b.a.b #25 ENSGT00940000153118.db.a.a.b.a.a #26 ENSGT01100000263575.B.t.a.b ##29 Drill MODERN SPECIES 411 MCL1 (ENSMLEG00000026079) ADAMTSL4 (ENSMLEG00000041962) ECM1 (ENSMLEG00000023846) #7 TARS2 (ENSMLEG00000030174) #8 RPRD2 (ENSMLEG00000028436) #9 PRPF3 (ENSMLEG00000040609) #11 CIART (ENSMLEG00000009773) #13 C1orf54 (ENSMLEG00000007055) #14 APH1A (ENSMLEG00000037901) #15 CA14 (ENSMLEG00000037597) #16 ANP32E (ENSMLEG00000025639) #17 PLEKHO1 (ENSMLEG00000041687) #18 VPS45 (ENSMLEG00000014395) #19 OTUD7B (ENSMLEG00000043764) #20 MTMR11 (ENSMLEG00000037687) #21 SF3B4 (ENSMLEG00000038667) #22 SV2A (ENSMLEG00000027748) #23 BOLA1 (ENSMLEG00000000340) #24 H2AC21 (ENSMLEG00000025354) #25 H2AC20 (ENSMLEG00000032236) #26 H2BC21 (ENSMLEG00000028179) ##29 Sooty mangabey MODERN SPECIES 153 MCL1 (ENSCATG00000032744) ADAMTSL4 (ENSCATG00000043576) ECM1 (ENSCATG00000033093) #7 TARS2 (ENSCATG00000034784) #8 RPRD2 (ENSCATG00000033842) #9 PRPF3 (ENSCATG00000041778) #11 CIART (ENSCATG00000032392) #13 C1orf54 (ENSCATG00000033751) #14 APH1A (ENSCATG00000033983) #15 CA14 (ENSCATG00000044036) #16 ANP32E (ENSCATG00000033019) #17 PLEKHO1 (ENSCATG00000031337) #18 VPS45 (ENSCATG00000033198) #19 OTUD7B (ENSCATG00000039246) #20 MTMR11 (ENSCATG00000034367) #21 SF3B4 (ENSCATG00000033114) #22 SV2A (ENSCATG00000034955) #23 H2AC21 (ENSCATG00000018627) #25 H2AC20 (ENSCATG00000017082) #26 H2BC21 (ENSCATG00000020834) #29 Macaca ANCESTRAL SPECIES ENSGT00940000161136 ENSGT00390000006215 #7 ENSGT00940000161600 #8 ENSGT00950000183094.a #9 ENSGT00390000011497 #11 ENSGT00500000045038.y.b.b #12 ENSGT00390000018360 #13 ENSGT00390000003103 #14 ENSGT00390000002049.c.a #15 ENSGT00940000156893 #16 ENSGT00950000182907.a.a #17 ENSGT00530000063760.b #18 ENSGT00550000075028 #19 ENSGT00940000159172 #20 ENSGT00940000160276 #21 ENSGT00870000136537.m #22 ENSGT00950000182940.b.a.b #23 ENSGT00510000048165 #24 ENSGT00940000153118.db.a.a.b.a.b #25 ENSGT00940000153118.db.a.a.b.a.a #26 ENSGT01100000263575.B.u #29 ENSGT01100000263548.a.b.b ENSGT01060000248528.b.kh.yb.a.b ##34 ENSGT01100000263506.a.f.b ##36 ENSGT01060000248528.b.jh.b ##34 ENSGT01100000263514.A.e.a.b.a.b.a.a.a.a ENSGT01100000263506.a.e.a.a.a.b.a.a.b.a.b.a.a.a ##36 ENSGT01060000248528.b.kh.yb.b.a.mb ##34 ENSGT00940000155501.a.b ENSGT01100000263514.A.e.a.b.a.b.a.a.a.b.a.b ENSGT00940000153092.a.a.c.a.a Pig-tailed macaque MODERN SPECIES 262 ADAMTSL4 (ENSMNEG00000028307) ECM1 (ENSMNEG00000015328) #7 TARS2 (ENSMNEG00000042066) #8 RPRD2 (ENSMNEG00000028542) #9 PRPF3 (ENSMNEG00000038161) #11 ENSMNEG00000031239 #12 CIART (ENSMNEG00000040203) #13 C1orf54 (ENSMNEG00000038419) #14 APH1A (ENSMNEG00000034177) #15 CA14 (ENSMNEG00000035520) #16 ANP32E (ENSMNEG00000042651) #17 PLEKHO1 (ENSMNEG00000033535) #18 VPS45 (ENSMNEG00000035754) #19 OTUD7B (ENSMNEG00000034782) #20 MTMR11 (ENSMNEG00000033672) #21 SF3B4 (ENSMNEG00000031839) #22 SV2A (ENSMNEG00000037160) #23 H2AC21 (ENSMNEG00000009606) #25 H2AC20 (ENSMNEG00000028094) #26 H2BC21 (ENSMNEG00000013123) #29 Macaca_a ANCESTRAL SPECIES ENSGT00940000161136 ENSGT00390000006215 #7 ENSGT00940000161600 #8 ENSGT00950000183094.a #9 ENSGT00390000011497 #11 ENSGT00500000045038.y.b.b #12 ENSGT00390000018360 #13 ENSGT00390000003103 #14 ENSGT00390000002049.c.a #15 ENSGT00940000156893 #16 ENSGT00950000182907.a.a #17 ENSGT00530000063760.b #18 ENSGT00550000075028 #19 ENSGT00940000159172 #20 ENSGT00940000160276 #21 ENSGT00870000136537.m #22 ENSGT00950000182940.b.a.b #23 ENSGT00510000048165 #24 ENSGT00940000153118.db.a.a.b.a.b #25 ENSGT00940000153118.db.a.a.b.a.a #26 ENSGT01100000263559.B #35 ENSGT01100000263506.a.e.b #36 ENSGT01050000244808.A.b.b.a #37 ENSGT00940000160915.e.b ENSGT00950000183190.a.b.a.b ENSGT00420000029746.f.c.b.b ENSGT00400000022759 ENSGT00960000186796.b.b.a ENSGT00910000147134 ENSGT01050000244864.D ENSGT01050000244864.C Crab-eating macaque MODERN SPECIES ADAMTSL4 (ENSMFAG00000002869) ECM1 (ENSMFAG00000040115) #7 TARS2 (ENSMFAG00000030387) #8 RPRD2 (ENSMFAG00000002559) #9 PRPF3 (ENSMFAG00000039791) #11 MRPS21 (ENSMFAG00000042375) #12 CIART (ENSMFAG00000042429) #13 C1orf54 (ENSMFAG00000002775) #14 APH1A (ENSMFAG00000034137) #15 CA14 (ENSMFAG00000040977) #16 ANP32E (ENSMFAG00000000851) #17 PLEKHO1 (ENSMFAG00000034638) #18 VPS45 (ENSMFAG00000032727) #19 OTUD7B (ENSMFAG00000001415) #20 MTMR11 (ENSMFAG00000031699) #21 SF3B4 (ENSMFAG00000042395) #22 SV2A (ENSMFAG00000034474) #23 BOLA1 (ENSMFAG00000048940) #24 H2AC21 (ENSMFAG00000054389) #25 H2AC20 (ENSMFAG00000005216) #26 H2BC21 (ENSMFAG00000060844) #29 ENSMFAG00000059848 ##34 ENSMFAG00000060624 ##36 H2AC18 (ENSMFAG00000065787) #30 H2BC18 (ENSMFAG00000003396) #36 FCGR1A (ENSMFAG00000001064) #37 ENSMFAG00000036545 ENSMFAG00000047736 ENSMFAG00000055151 ENSMFAG00000033357 NDUFA11 (ENSMFAG00000017334) Rhesus MODERN SPECIES RPRD2 (ENSMMUG00000007303) #9 PRPF3 (ENSMMUG00000016301) #11 ENSMMUG00000060724 MRPS21 (ENSMMUG00000021391) #12 ENSMMUG00000049420 CIART (ENSMMUG00000021388) #13 C1H1orf54 (ENSMMUG00000021387) #14 APH1A (ENSMMUG00000021386) #15 CA14 (ENSMMUG00000021385) #16 ANP32E (ENSMMUG00000021531) #17 PLEKHO1 (ENSMMUG00000013681) #18 VPS45 (ENSMMUG00000013673) #19 OTUD7B (ENSMMUG00000007244) #20 ENSMMUG00000052282 MTMR11 (ENSMMUG00000007246) #21 SF3B4 (ENSMMUG00000007256) #22 SV2A (ENSMMUG00000007257) #23 BOLA1 (ENSMMUG00000007258) #24 H2AC21 (ENSMMUG00000061036) #25 H2AC20 (ENSMMUG00000037540) #26 H4C14 (ENSMMUG00000052382) ##34 H3C13 (ENSMMUG00000054078) #35 H2BC18 (ENSMMUG00000040506) #36 FCGR1A (ENSMMUG00000004362) #37 ENSMMUG00000062140 ENSMMUG00000048493 ENSMMUG00000057963 ENSMMUG00000056619 GJA8 (ENSMMUG00000001382) GJA5 (ENSMMUG00000001803) ACP6 (ENSMMUG00000013561) Vervet Monkey MODERN SPECIES 179 ADAMTSL4 (ENSCSAG00000018068) ECM1 (ENSCSAG00000018071) #7 TARS2 (ENSCSAG00000018075) #8 ENSCSAG00000018079 #9 ENSCSAG00000018084 #9 MRPS21 (ENSCSAG00000018085) #12 CIART (ENSCSAG00000018088) #13 C1orf54 (ENSCSAG00000018096) #14 APH1A (ENSCSAG00000018098) #15 CA14 (ENSCSAG00000018099) #16 ANP32E (ENSCSAG00000018102) #17 PLEKHO1 (ENSCSAG00000018103) #18 VPS45 (ENSCSAG00000018109) #19 OTUD7B (ENSCSAG00000018112) #20 MTMR11 (ENSCSAG00000018123) #21 SF3B4 (ENSCSAG00000018129) #22 SV2A (ENSCSAG00000018135) #23 BOLA1 (ENSCSAG00000000213) #24 H2AC21 (ENSCSAG00000000214) #25 H2AC20 (ENSCSAG00000000217) #26 H2BC21 (ENSCSAG00000000219) ##29 H2BC18 (ENSCSAG00000000221) #36 FCGR1A (ENSCSAG00000018139) #37 ENSCSAG00000000224 Rhinopithecus ANCESTRAL SPECIES 23 ENSGT00910000147146 ENSGT00390000006215 #7 ENSGT00940000161600 #8 ENSGT00950000183094.a #9 ENSGT00390000011497 #11 ENSGT00500000045038.y.b.b #12 ENSGT00390000018360 #13 ENSGT00390000003103 #14 ENSGT00390000002049.c.a #15 ENSGT00940000156893 #16 ENSGT00950000182907.a.a #17 ENSGT00530000063760.b #18 ENSGT00550000075028 #19 ENSGT00940000159172 #20 ENSGT00940000160276 #21 ENSGT00870000136537.m #22 ENSGT00950000182940.b.a.b #23 ENSGT00940000153118.db.a.a.b.a.b #25 ENSGT00940000153118.db.a.a.b.a.a #26 ENSGT01100000263575.B.u #29 ENSGT01100000263548.a.b.b ENSGT00940000163388 ENSGT00940000163165 ENSGT00400000024870 ENSGT00940000161576 ENSGT00970000193687 ENSGT00940000163521 ENSGT00940000159644 ENSGT00940000162298 ENSGT00940000163016 ENSGT00940000163314 Golden snub-nosed monkey MODERN SPECIES 2622 ENSRROG00000044578 ECM1 (ENSRROG00000030152) #7 TARS2 (ENSRROG00000030946) #8 RPRD2 (ENSRROG00000044462) #9 PRPF3 (ENSRROG00000027464) #11 MRPS21 (ENSRROG00000035197) #12 CIART (ENSRROG00000031459) #13 C1orf54 (ENSRROG00000032162) #14 APH1A (ENSRROG00000045010) #15 ENSRROG00000009807 #16 ANP32E (ENSRROG00000030038) #17 PLEKHO1 (ENSRROG00000029550) #18 VPS45 (ENSRROG00000034970) #19 OTUD7B (ENSRROG00000013470) #20 MTMR11 (ENSRROG00000031467) #21 SF3B4 (ENSRROG00000029366) #22 SV2A (ENSRROG00000030492) #23 H2AC21 (ENSRROG00000026620) #25 H2AC20 (ENSRROG00000024717) #26 ENSRROG00000000406 #31 Black snub-nosed monkey MODERN SPECIES 590 MCL1 (ENSRBIG00000031092) ADAMTSL4 (ENSRBIG00000044718) ECM1 (ENSRBIG00000029889) #7 TARS2 (ENSRBIG00000044518) #8 RPRD2 (ENSRBIG00000032833) #9 PRPF3 (ENSRBIG00000028854) #11 CIART (ENSRBIG00000026376) #13 C1orf54 (ENSRBIG00000027635) #14 APH1A (ENSRBIG00000035934) #15 CA14 (ENSRBIG00000029322) #16 ANP32E (ENSRBIG00000032210) #17 PLEKHO1 (ENSRBIG00000020541) #18 VPS45 (ENSRBIG00000043305) #19 OTUD7B (ENSRBIG00000030452) #20 MTMR11 (ENSRBIG00000044428) #21 SF3B4 (ENSRBIG00000043392) #22 SV2A (ENSRBIG00000034170) #23 H2AC21 (ENSRBIG00000020060) #25 H2AC20 (ENSRBIG00000024633) #26 H2BC21 (ENSRBIG00000006763) #29 Hominoidea ANCESTRAL SPECIES 7 ENSGT00910000147146 ENSGT00390000006215 #7 ENSGT00940000161600 #8 ENSGT00950000183094.a #9 ENSGT00390000011497 #11 ENSGT00500000045038.y.b.a.a #12 ENSGT00390000018360 #13 ENSGT00390000003103 #14 ENSGT00390000002049.c.a #15 ENSGT00940000156893 #16 ENSGT00950000182907.a.a #17 ENSGT00530000063760.b #18 ENSGT00550000075028 #19 ENSGT00940000159172 #20 ENSGT00940000160276 #21 ENSGT00870000136537.m #22 ENSGT00950000182940.b.a.b #23 ENSGT00510000048165 #24 ENSGT00940000153118.db.a.a.b.a.b #25 ENSGT00940000153118.db.a.a.b.a.a #26 ENSGT01100000263575.B.u #29 ENSGT01100000263559.A.f.e ##35 ENSGT01100000263506.a.e.b #36 ENSGT01050000244808.A.b.b.a #37 ENSGT00940000160915.e.b ENSGT00950000183190.a.b.a.b ENSGT00390000009543.d ENSGT00420000029746.f.c Hominidae ANCESTRAL SPECIES 6 ENSGT00910000147146 ENSGT00390000006215 #7 ENSGT00940000161600 #8 ENSGT00950000183094.a #9 ENSGT00390000011497 #11 ENSGT00500000045038.y.b.a.a #12 ENSGT00390000018360 #13 ENSGT00390000003103 #14 ENSGT00390000002049.c.a #15 ENSGT00940000156893 #16 ENSGT00950000182907.a.a #17 ENSGT00530000063760.b #18 ENSGT00550000075028 #19 ENSGT00940000159172 #20 ENSGT00940000160276 #21 ENSGT00870000136537.m #22 ENSGT00950000182940.b.a.b #23 ENSGT00510000048165 #24 ENSGT00940000153118.db.a.a.b.a.b #25 ENSGT00940000153118.db.a.a.b.a.a #26 ENSGT01100000263575.B.u #29 ENSGT01100000263559.A.f.e ##35 ENSGT01100000263506.a.e.b #36 ENSGT01050000244808.A.b.b.a #37 ENSGT00940000160915.e.b ENSGT00950000183190.a.b.a.b ENSGT00390000009543.d ENSGT00420000029746.f.c Homo/Pan/Gorilla group ANCESTRAL SPECIES 6 ENSGT00910000147146 ENSGT00390000006215 #7 ENSGT00940000161600 #8 ENSGT00950000183094.a #9 ENSGT00390000011497 #11 ENSGT00500000045038.y.b.a.a #12 ENSGT00390000018360 #13 ENSGT00390000003103 #14 ENSGT00390000002049.c.a #15 ENSGT00940000156893 #16 ENSGT00950000182907.a.a #17 ENSGT00530000063760.b #18 ENSGT00550000075028 #19 ENSGT00940000159172 #20 ENSGT00940000160276 #21 ENSGT00870000136537.m #22 ENSGT00950000182940.b.a.b #23 ENSGT00510000048165 #24 ENSGT00940000153118.db.a.a.b.a.b #25 ENSGT00940000153118.db.a.a.b.a.a #26 ENSGT01100000263575.B.u #29 ENSGT01100000263559.A.f.e ##35 ENSGT01100000263506.a.e.b #36 ENSGT01050000244808.A.b.b.a #37 ENSGT00940000160915.e.b ENSGT00390000009543.d ENSGT00420000029746.f.c Gorilla MODERN SPECIES ENSGGOG00000041363 #7 ENSGGOG00000006323 #7 TARS2 (ENSGGOG00000006311) #8 RPRD2 (ENSGGOG00000004818) #9 PRPF3 (ENSGGOG00000013174) #11 MRPS21 (ENSGGOG00000027532) #12 CIART (ENSGGOG00000016967) #13 C1orf54 (ENSGGOG00000016964) #14 APH1A (ENSGGOG00000017118) #15 CA14 (ENSGGOG00000017116) #16 ENSGGOG00000011889 #17 PLEKHO1 (ENSGGOG00000002021) #18 VPS45 (ENSGGOG00000026516) #19 OTUD7B (ENSGGOG00000024965) #20 MTMR11 (ENSGGOG00000004764) #21 SF3B4 (ENSGGOG00000004761) #22 SV2A (ENSGGOG00000002959) #23 BOLA1 (ENSGGOG00000002957) #24 H2AC21 (ENSGGOG00000040311) #25 HIST2H2AC (ENSGGOG00000040152) #26 H2BC21 (ENSGGOG00000036989) #29 ENSGGOG00000036863 ##34 HIST2H3A (ENSGGOG00000037264) #35 HIST2H2AA3 (ENSGGOG00000040128) #30 ENSGGOG00000040718 ##36 HIST2H2AA3 (ENSGGOG00000043514) #30 HIST2H3A (ENSGGOG00000041476) ##35 ENSGGOG00000039364 ##34 ENSGGOG00000036188 ENSGGOG00000041808 #36 ENSGGOG00000039911 #37 Homo/Pan group ANCESTRAL SPECIES 7 ENSGT00910000147146 ENSGT00390000006215 #7 ENSGT00940000161600 #8 ENSGT00950000183094.a #9 ENSGT00390000011497 #11 ENSGT00500000045038.y.b.a.a #12 ENSGT00390000018360 #13 ENSGT00390000003103 #14 ENSGT00390000002049.c.a #15 ENSGT00940000156893 #16 ENSGT00950000182907.a.a #17 ENSGT00530000063760.b #18 ENSGT00550000075028 #19 ENSGT00940000159172 #20 ENSGT00940000160276 #21 ENSGT00870000136537.m #22 ENSGT00950000182940.b.a.b #23 ENSGT00510000048165 #24 ENSGT00940000153118.db.a.a.b.a.b #25 ENSGT00940000153118.db.a.a.b.a.a #26 ENSGT01100000263575.B.u #29 ENSGT01100000263559.A.f.e ##35 ENSGT01100000263506.a.e.b #36 ENSGT01050000244808.A.b.b.a #37 ENSGT00940000160915.e.b ENSGT00390000009543.d ENSGT00420000029746.f.c Human MODERN SPECIES ADAMTSL4 (ENSG00000143382) ECM1 (ENSG00000143369) #7 TARS2 (ENSG00000143374) #8 RPRD2 (ENSG00000163125) #9 PRPF3 (ENSG00000117360) #11 MRPS21 (ENSG00000266472) #12 CIART (ENSG00000159208) #13 C1orf54 (ENSG00000118292) #14 APH1A (ENSG00000117362) #15 CA14 (ENSG00000118298) #16 ANP32E (ENSG00000143401) #17 PLEKHO1 (ENSG00000023902) #18 VPS45 (ENSG00000136631) #19 OTUD7B (ENSG00000264522) #20 MTMR11 (ENSG00000014914) #21 SF3B4 (ENSG00000143368) #22 SV2A (ENSG00000159164) #23 BOLA1 (ENSG00000178096) #24 H2AC21 (ENSG00000184270) #25 H2AC20 (ENSG00000184260) #26 H2BC21 (ENSG00000184678) #29 H4C15 (ENSG00000270276) ##34 H3C15 (ENSG00000203852) #35 H2AC19 (ENSG00000288859) #30 H2AC18 (ENSG00000288825) #30 H3C14 (ENSG00000203811) #35 H4C14 (ENSG00000270882) ##34 H3C13 (ENSG00000183598) #35 H2BC18 (ENSG00000203814) #36 FCGR1A (ENSG00000150337) #37 PPIAL4C (ENSG00000288867) Pan ANCESTRAL SPECIES ENSGT00910000147146 ENSGT00390000006215 #7 ENSGT00940000161600 #8 ENSGT00950000183094.a #9 ENSGT00390000011497 #11 ENSGT00500000045038.y.b.a.a #12 ENSGT00390000018360 #13 ENSGT00390000003103 #14 ENSGT00390000002049.c.a #15 ENSGT00940000156893 #16 ENSGT00950000182907.a.a #17 ENSGT00530000063760.b #18 ENSGT00550000075028 #19 ENSGT00940000159172 #20 ENSGT00940000160276 #21 ENSGT00870000136537.m #22 ENSGT00950000182940.b.a.b #23 ENSGT00510000048165 #24 ENSGT00940000153118.db.a.a.b.a.b #25 ENSGT00940000153118.db.a.a.b.a.a #26 ENSGT01100000263575.B.u #29 ENSGT01100000263559.A.f.e ##35 ENSGT01100000263506.a.e.b #36 ENSGT01050000244808.A.b.b.a #37 ENSGT00940000160915.e.b ENSGT00390000009543.d.c ENSGT00420000029746.f.c.d ENSGT00910000147491.a ENSGT00420000029746.e.a.b.b.b.d ENSGT00910000145223.a.a ENSGT00390000009543.d.d Chimpanzee MODERN SPECIES ADAMTSL4 (ENSPTRG00000001258) ECM1 (ENSPTRG00000001257) #7 TARS2 (ENSPTRG00000001256) #8 RPRD2 (ENSPTRG00000001255) #9 PRPF3 (ENSPTRG00000001254) #11 MRPS21 (ENSPTRG00000034372) #12 CIART (ENSPTRG00000001252) #13 C1H1orf54 (ENSPTRG00000001251) #14 APH1A (ENSPTRG00000001250) #15 CA14 (ENSPTRG00000001249) #16 ANP32E (ENSPTRG00000046939) #17 PLEKHO1 (ENSPTRG00000001247) #18 VPS45 (ENSPTRG00000001246) #19 OTUD7B (ENSPTRG00000001245) #20 MTMR11 (ENSPTRG00000001244) #21 SF3B4 (ENSPTRG00000001243) #22 SV2A (ENSPTRG00000001242) #23 BOLA1 (ENSPTRG00000001241) #24 H2AC21 (ENSPTRG00000047219) #25 H2AC20 (ENSPTRG00000052021) #26 H2BC21 (ENSPTRG00000050454) #29 H4C6 (ENSPTRG00000001238) ##34 H3C13 (ENSPTRG00000044185) ##35 H2BC18 (ENSPTRG00000047357) #36 FCGR1A (ENSPTRG00000001233) #37 ENSPTRG00000051267 ENSPTRG00000046494 ENSPTRG00000047652 ENSPTRG00000047567 ENSPTRG00000023855 ENSPTRG00000046020 Bonobo MODERN SPECIES ADAMTSL4 (ENSPPAG00000042395) ECM1 (ENSPPAG00000031650) #7 TARS2 (ENSPPAG00000042011) #8 RPRD2 (ENSPPAG00000028604) #9 PRPF3 (ENSPPAG00000030983) #11 MRPS21 (ENSPPAG00000041557) #12 CIART (ENSPPAG00000043860) #13 C1orf54 (ENSPPAG00000041323) #14 APH1A (ENSPPAG00000033416) #15 CA14 (ENSPPAG00000027877) #16 ANP32E (ENSPPAG00000032079) #17 PLEKHO1 (ENSPPAG00000035597) #18 VPS45 (ENSPPAG00000039563) #19 OTUD7B (ENSPPAG00000027439) #20 MTMR11 (ENSPPAG00000030287) #21 SF3B4 (ENSPPAG00000040904) #22 SV2A (ENSPPAG00000028470) #23 BOLA1 (ENSPPAG00000025235) #24 H2AC21 (ENSPPAG00000019861) #25 H2AC20 (ENSPPAG00000022736) #26 H2BC21 (ENSPPAG00000025024) #29 H3-7 (ENSPPAG00000023295) ##35 H2BC18 (ENSPPAG00000020072) #36 FCGR1A (ENSPPAG00000039866) #37 ENSPPAG00000036804 ENSPPAG00000032403 ENSPPAG00000034850 ENSPPAG00000029215 ENSPPAG00000020771 ENSPPAG00000028256 ENSPPAG00000042737 Orangutan MODERN SPECIES ADAMTSL4 (ENSPPYG00000000896) ECM1 (ENSPPYG00000000897) #7 TARS2 (ENSPPYG00000000898) #8 RPRD2 (ENSPPYG00000000899) #9 PRPF3 (ENSPPYG00000000900) #11 MRPS21 (ENSPPYG00000032712) #12 CIART (ENSPPYG00000000903) #13 C1orf54 (ENSPPYG00000000904) #14 APH1A (ENSPPYG00000000905) #15 CA14 (ENSPPYG00000000906) #16 ANP32E (ENSPPYG00000000907) #17 PLEKHO1 (ENSPPYG00000034117) #18 VPS45 (ENSPPYG00000000909) #19 OTUD7B (ENSPPYG00000000910) #20 MTMR11 (ENSPPYG00000000911) #21 SF3B4 (ENSPPYG00000000912) #22 SV2A (ENSPPYG00000000913) #23 BOLA1 (ENSPPYG00000040309) #24 H2AC21 (ENSPPYG00000035072) #25 ENSPPYG00000030729 H2BC21 (ENSPPYG00000000917) #29 ENSPPYG00000000922 ##34 ENSPPYG00000039474 ##36 ENSPPYG00000036744 #30 ENSPPYG00000036244 #35 ENSPPYG00000032863 #35 ENSPPYG00000031542 ##36 FCGR1A (ENSPPYG00000019984) #37 ENSPPYG00000039543 ENSPPYG00000038344 ENSPPYG00000032672 Gibbon MODERN SPECIES 2 ENSNLEG00000033454 ECM1 (ENSNLEG00000009877) #7 TARS2 (ENSNLEG00000009858) #8 ENSNLEG00000029292 #9 PRPF3 (ENSNLEG00000009841) #11 MRPS21 (ENSNLEG00000031023) #12 CIART (ENSNLEG00000009830) #13 APH1A (ENSNLEG00000009799) #15 C1orf54 (ENSNLEG00000009825) #14 CA14 (ENSNLEG00000009787) #16 ANP32E (ENSNLEG00000032790) #17 ENSNLEG00000009769 #18 VPS45 (ENSNLEG00000009742) #19 OTUD7B (ENSNLEG00000009731) #20 MTMR11 (ENSNLEG00000009701) #21 ENSNLEG00000009693 #22 SV2A (ENSNLEG00000009675) #23 H2AC20 (ENSNLEG00000031795) #26 H2BC21 (ENSNLEG00000034437) #29 ENSNLEG00000034350 ##35 ENSNLEG00000027903 #30 H4C15 (ENSNLEG00000027152) ##34 H3-7 (ENSNLEG00000034204) ##35 H2BC18 (ENSNLEG00000030888) #36 ENSNLEG00000009671 #37 ENSNLEG00000033645 ENSNLEG00000035986 ENSNLEG00000034293 ENSNLEG00000033725 ENSNLEG00000031320 ENSNLEG00000029979 Catarrhini ANCESTRAL SPECIES 9 ENSGT00940000159887 ENSGT00940000157501 ENSGT00940000154813 ENSGT00390000012412 ENSGT00940000156521.b ENSGT00940000158908 ENSGT00390000011163.b ENSGT00940000160477 ENSGT00940000157848 ENSGT00950000183128.C ENSGT00530000064011 ENSGT00530000063737 ENSGT00390000007937 ENSGT00390000016577 ENSGT00940000161537 ENSGT00870000136537.n #22 ENSGT00940000156087 ENSGT00390000010770 ENSGT00390000007015 ENSGT00940000157229 ENSGT00390000010899.a.a ENSGT00940000159456 ENSGT00390000011890 ENSGT00950000183195.b.a ENSGT00950000183192.a.a.y.a ENSGT00940000158191 ENSGT00940000161505 ENSGT00920000149143 ENSGT00940000160169 ENSGT00940000155076.a ENSGT00390000003156.a.b.j Hominoidea ANCESTRAL SPECIES 12 ENSGT00940000159887 ENSGT00940000157501 ENSGT00940000154813 ENSGT00390000012412 ENSGT00940000156521.b ENSGT00940000158908 ENSGT00390000011163.b ENSGT00940000160477 ENSGT00940000157848 ENSGT00950000183128.C ENSGT00530000064011 ENSGT00530000063737 ENSGT00390000007937 ENSGT00390000016577 ENSGT00940000161537 ENSGT00870000136537.n #22 ENSGT00940000156087 ENSGT00390000010770 ENSGT00390000007015 ENSGT00940000157229 ENSGT00390000010899.a.a ENSGT00940000159456 ENSGT00390000011890 ENSGT00950000183195.b.a ENSGT00950000183192.a.a.y.a ENSGT00940000158191 ENSGT00940000161505 ENSGT00920000149143 ENSGT00940000160169 ENSGT00940000155076.a ENSGT00390000003156.a.b.j Hominidae ANCESTRAL SPECIES 14 ENSGT00940000159887 ENSGT00940000157501 ENSGT00940000154813 ENSGT00390000012412 ENSGT00940000156521.b ENSGT00940000158908 ENSGT00390000011163.b ENSGT00940000160477 ENSGT00940000157848 ENSGT00950000183128.C ENSGT00530000064011 ENSGT00530000063737 ENSGT00390000007937 ENSGT00390000016577 ENSGT00940000161537 ENSGT00870000136537.n #22 ENSGT00940000156087 ENSGT00390000010770 ENSGT00390000007015 ENSGT00940000157229 ENSGT00390000010899.a.a ENSGT00940000159456 ENSGT00390000011890 ENSGT00950000183195.b.a ENSGT00950000183192.a.a.y.a ENSGT00940000158191 ENSGT00940000161505 ENSGT00920000149143 ENSGT00940000160169 ENSGT00940000155076.a ENSGT00390000003156.a.b.j Homo/Pan/Gorilla group ANCESTRAL SPECIES 12 ENSGT00940000159887 ENSGT00940000157501 ENSGT00940000154813 ENSGT00390000012412 ENSGT00940000156521.b ENSGT00940000158908 ENSGT00390000011163.b ENSGT00940000160477 ENSGT00940000157848 ENSGT00950000183128.C ENSGT00530000064011 ENSGT00530000063737 ENSGT00390000007937 ENSGT00390000016577 ENSGT00940000161537 ENSGT00870000136537.n #22 ENSGT00940000156087 ENSGT00390000010770 ENSGT00390000007015 ENSGT00940000157229 ENSGT00390000010899.a.a ENSGT00940000159456 ENSGT00390000011890.f ENSGT00950000183195.b.a ENSGT00950000183192.a.a.y.a ENSGT00940000158191 ENSGT00940000161505 ENSGT00920000149143 ENSGT00940000160169 ENSGT00940000155076.a ENSGT00390000003156.a.b.j Homo/Pan group ANCESTRAL SPECIES 11 ENSGT00940000159887 ENSGT00940000157501 ENSGT00940000154813 ENSGT00390000012412 ENSGT00940000156521.b ENSGT00940000158908 ENSGT00390000011163.b ENSGT00940000160477 ENSGT00940000157848 ENSGT00950000183128.C ENSGT00530000064011 ENSGT00530000063737 ENSGT00390000007937 ENSGT00390000016577 ENSGT00940000161537 ENSGT00870000136537.n #22 ENSGT00940000156087 ENSGT00390000010770 ENSGT00390000007015 ENSGT00940000157229 ENSGT00390000010899.a.a ENSGT00940000159456 ENSGT00390000011890.e ENSGT00950000183195.b.a ENSGT00950000183192.a.a.y.a ENSGT00940000158191 ENSGT00940000161505 ENSGT00920000149143 ENSGT00940000160169 ENSGT00940000155076.a ENSGT00390000003156.a.b.j Pan ANCESTRAL SPECIES 8 ENSGT00940000159887 ENSGT00940000157501 ENSGT00940000154813 ENSGT00390000012412 ENSGT00940000156521.b ENSGT00940000158908 ENSGT00390000011163.b ENSGT00940000160477 ENSGT00940000157848 ENSGT00950000183128.C ENSGT00530000064011 ENSGT00530000063737 ENSGT00390000007937 ENSGT00390000016577 ENSGT00940000161537 ENSGT00870000136537.n #22 ENSGT00940000156087 ENSGT00390000010770 ENSGT00390000007015 ENSGT00940000157229 ENSGT00390000010899.a.a ENSGT00940000159456 ENSGT00390000011890.f ENSGT00950000183195.b.a ENSGT00950000183192.a.a.y.a ENSGT00940000158191 ENSGT00940000161505 ENSGT00920000149143 ENSGT00940000160169 ENSGT00940000155076.a ENSGT00390000003156.a.b.j Bonobo MODERN SPECIES 5 HSPA2 (ENSPPAG00000037053) PPP1R36 (ENSPPAG00000032577) PLEKHG3 (ENSPPAG00000041966) SPTB (ENSPPAG00000037300) ENSPPAG00000043216 ENSPPAG00000003667 ENSPPAG00000037423 FNTB (ENSPPAG00000031692) MAX (ENSPPAG00000041645) ENSPPAG00000011962 FUT8 (ENSPPAG00000026446) ENSPPAG00000025950 GPHN (ENSPPAG00000029332) ENSPPAG00000028424 GARIN2 (ENSPPAG00000037487) ENSPPAG00000030024 #22 PALS1 (ENSPPAG00000036838) ENSPPAG00000016847 EIF2S1 (ENSPPAG00000041464) PLEK2 (ENSPPAG00000035842) TMEM229B (ENSPPAG00000033263) PLEKHH1 (ENSPPAG00000038690) ENSPPAG00000039461 ARG2 (ENSPPAG00000042567) VTI1B (ENSPPAG00000023569) RDH11 (ENSPPAG00000037089) RDH12 (ENSPPAG00000041689) ZFYVE26 (ENSPPAG00000027132) ENSPPAG00000040660 ZFP36L1 (ENSPPAG00000027452) ENSPPAG00000031055 Chimpanzee MODERN SPECIES 5 PPP1R36 (ENSPTRG00000006440) ENSPTRG00000044417 PLEKHG3 (ENSPTRG00000006441) SPTB (ENSPTRG00000006443) CHURC1 (ENSPTRG00000045004) GPX2 (ENSPTRG00000006445) ENSPTRG00000006446 FNTB (ENSPTRG00000006447) MAX (ENSPTRG00000006449) ENSPTRG00000048963 FUT8 (ENSPTRG00000006454) ENSPTRG00000047244 CCDC196 (ENSPTRG00000047535) GPHN (ENSPTRG00000006457) GARIN2 (ENSPTRG00000006459) ENSPTRG00000049727 #22 PALS1 (ENSPTRG00000006460) ATP6V1D (ENSPTRG00000006461) EIF2S1 (ENSPTRG00000006462) PLEK2 (ENSPTRG00000006463) TMEM229B (ENSPTRG00000030714) PLEKHH1 (ENSPTRG00000006465) PIGH (ENSPTRG00000006466) ARG2 (ENSPTRG00000006467) VTI1B (ENSPTRG00000006468) RDH11 (ENSPTRG00000006469) RDH12 (ENSPTRG00000006470) ZFYVE26 (ENSPTRG00000006471) RAD51B (ENSPTRG00000006472) ENSPTRG00000052791 ZFP36L1 (ENSPTRG00000051193) Gorilla MODERN SPECIES 5 HSPA2 (ENSGGOG00000009451) PPP1R36 (ENSGGOG00000009454) PLEKHG3 (ENSGGOG00000009377) SPTB (ENSGGOG00000009384) ENSGGOG00000041596 ENSGGOG00000006616 ENSGGOG00000006618 FNTB (ENSGGOG00000009187) MAX (ENSGGOG00000026047) ENSGGOG00000026783 FUT8 (ENSGGOG00000008902) ENSGGOG00000026071 CCDC196 (ENSGGOG00000010207) GPHN (ENSGGOG00000010213) GARIN2 (ENSGGOG00000003117) ENSGGOG00000038845 #22 MPP5 (ENSGGOG00000011451) ATP6V1D (ENSGGOG00000001601) EIF2S1 (ENSGGOG00000001603) PLEK2 (ENSGGOG00000002160) TMEM229B (ENSGGOG00000036173) PLEKHH1 (ENSGGOG00000001500) ENSGGOG00000001507 ARG2 (ENSGGOG00000005615) VTI1B (ENSGGOG00000005620) RDH11 (ENSGGOG00000005624) RDH12 (ENSGGOG00000014600) ZFYVE26 (ENSGGOG00000015342) ENSGGOG00000041815 ZFP36L1 (ENSGGOG00000041615) ENSGGOG00000008703 Gibbon MODERN SPECIES 10 ZBTB1 (ENSNLEG00000032362) HSPA2 (ENSNLEG00000019134) PPP1R36 (ENSNLEG00000014250) ENSNLEG00000029726 ENSNLEG00000034976 PLEKHG3 (ENSNLEG00000014274) SPTB (ENSNLEG00000014288) FNTB (ENSNLEG00000014324) ENSNLEG00000033230 ENSNLEG00000029587 MAX (ENSNLEG00000014373) FUT8 (ENSNLEG00000014406) CCDC196 (ENSNLEG00000030889) GPHN (ENSNLEG00000000447) GARIN2 (ENSNLEG00000000515) ENSNLEG00000000537 #22 PALS1 (ENSNLEG00000000546) ATP6V1D (ENSNLEG00000032468) EIF2S1 (ENSNLEG00000000647) PLEK2 (ENSNLEG00000000680) ENSNLEG00000027512 TMEM229B (ENSNLEG00000027627) PLEKHH1 (ENSNLEG00000000704) PIGH (ENSNLEG00000000739) ARG2 (ENSNLEG00000000741) VTI1B (ENSNLEG00000000780) RDH11 (ENSNLEG00000000821) RDH12 (ENSNLEG00000000868) ZFYVE26 (ENSNLEG00000000876) RAD51B (ENSNLEG00000001037) ENSNLEG00000034931 Cercopithecidae ANCESTRAL SPECIES 7 ENSGT00940000157501 ENSGT00940000154813 ENSGT00390000012412 ENSGT00940000156521.b ENSGT00940000158908 ENSGT00390000011163.b ENSGT00940000160477 ENSGT00940000157848 ENSGT00950000183128.C ENSGT00530000064011 ENSGT00530000063737 ENSGT00550000074832.r.a ENSGT00390000007937 ENSGT00390000016577 ENSGT00940000161537 ENSGT00870000136537.n #22 ENSGT00940000156087 ENSGT00390000010770.q.b ENSGT00390000007015 ENSGT00940000157229 ENSGT00390000010899.a.a ENSGT00940000159456 ENSGT00390000011890 ENSGT00950000183195.b.a ENSGT00950000183192.a.a.y.b ENSGT00940000158191 ENSGT00940000161505 ENSGT00920000149143 ENSGT00940000160169 ENSGT00940000155076.a ENSGT00390000003156.a.b.j Rhinopithecus ANCESTRAL SPECIES ENSGT00870000136537.n #22 Golden snub-nosed monkey MODERN SPECIES 631 ENSRROG00000029201 ENSRROG00000027125 GPHN (ENSRROG00000034309) ENSRROG00000028213 #22 GARIN2 (ENSRROG00000009046) PALS1 (ENSRROG00000032170) ENSRROG00000039873 EIF2S1 (ENSRROG00000030203) PLEK2 (ENSRROG00000039883) ENSRROG00000042563 ENSRROG00000020578 TMEM229B (ENSRROG00000022721) PLEKHH1 (ENSRROG00000040636) PIGH (ENSRROG00000044402) ARG2 (ENSRROG00000034597) VTI1B (ENSRROG00000037303) RDH11 (ENSRROG00000043419) RDH12 (ENSRROG00000034642) ZFYVE26 (ENSRROG00000010146) Cercopithecinae ANCESTRAL SPECIES 2 ENSGT00940000157501 ENSGT00940000154813 ENSGT00390000012412 ENSGT00940000156521.b ENSGT00940000158908 ENSGT00390000011163.b ENSGT00940000160477 ENSGT00940000157848 ENSGT00950000183128.C ENSGT00530000064011 ENSGT00530000063737 ENSGT00550000074832.r.a ENSGT00390000007937 ENSGT00390000016577 ENSGT00940000161537 ENSGT00870000136537.n #22 ENSGT00940000156087 ENSGT00390000010770.q.b ENSGT00390000007015 ENSGT00940000157229 ENSGT00390000010899.a.a ENSGT00940000159456 ENSGT00390000011890 ENSGT00950000183195.b.a ENSGT00950000183192.a.a.y.b ENSGT00940000158191 ENSGT00940000161505 ENSGT00920000149143 ENSGT00940000160169 ENSGT00940000155076.a ENSGT00390000003156.a.b.j Cercopithecinae_a ANCESTRAL SPECIES 1 ENSGT00940000154813 ENSGT00390000012412 ENSGT00940000156521.b ENSGT00940000158908 ENSGT00390000011163.b ENSGT00940000160477 ENSGT00940000157848 ENSGT00950000183128.C ENSGT00530000064011 ENSGT00530000063737 ENSGT00390000008403.y.a.b ENSGT00550000074832.r.a ENSGT00390000007937 ENSGT00390000016577 ENSGT00940000161537 ENSGT00870000136537.n #22 ENSGT00940000156087 ENSGT00390000010770.q.b.a.b ENSGT00390000007015 ENSGT00940000157229 ENSGT00940000163657 ENSGT00390000010899.a.a ENSGT00940000159456 ENSGT00390000011890 ENSGT00950000183195.b.a ENSGT00950000183192.a.a.y.b.a ENSGT00940000158191 ENSGT00940000161505 ENSGT00920000149143 ENSGT00940000160169 ENSGT00940000155076.a Macaca ANCESTRAL SPECIES 1 ENSGT00940000157501 ENSGT00940000154813 ENSGT00390000012412 ENSGT00940000156521.b ENSGT00940000158908 ENSGT00390000011163.b ENSGT00940000160477 ENSGT00940000157848 ENSGT00950000183128.C ENSGT00530000064011 ENSGT00530000063737 ENSGT00390000008403.y.a.b ENSGT00390000007937 ENSGT00390000016577 ENSGT00940000161537 ENSGT00870000136537.n #22 ENSGT00940000156087 ENSGT00390000010770.q.b.a.b ENSGT00390000007015 ENSGT00940000157229 ENSGT00940000163657 ENSGT00390000010899.a.a ENSGT00940000159456 ENSGT00390000011890 ENSGT00950000183195.b.a ENSGT00950000183192.a.a.z ENSGT00940000158191 ENSGT00940000161505 ENSGT00920000149143 ENSGT00940000160169 ENSGT00940000155076.a Pig-tailed macaque MODERN SPECIES 503 ENSMNEG00000035514 ADAMTS5 (ENSMNEG00000033327) ADAMTS1 (ENSMNEG00000039035) CYYR1 (ENSMNEG00000032647) ENSMNEG00000014799 APP (ENSMNEG00000045292) GABPA (ENSMNEG00000040851) ATP5PF (ENSMNEG00000031463) JAM2 (ENSMNEG00000037546) MRPL39 (ENSMNEG00000045460) ENSMNEG00000024978 CCDC196 (ENSMNEG00000037316) GPHN (ENSMNEG00000034888) ENSMNEG00000043150 GARIN2 (ENSMNEG00000043604) ENSMNEG00000031526 #22 PALS1 (ENSMNEG00000022940) ENSMNEG00000043675 EIF2S1 (ENSMNEG00000033037) PLEK2 (ENSMNEG00000033799) ENSMNEG00000010693 TMEM229B (ENSMNEG00000005285) PLEKHH1 (ENSMNEG00000042977) PIGH (ENSMNEG00000033527) ARG2 (ENSMNEG00000029042) ENSMNEG00000013762 RDH11 (ENSMNEG00000043413) RDH12 (ENSMNEG00000026550) ZFYVE26 (ENSMNEG00000039314) RAD51B (ENSMNEG00000040229) ZFP36L1 (ENSMNEG00000032614) Platyrrhini DUPLICATION Platyrrhini ANCESTRAL SPECIES 12 ENSGT00910000147146 ENSGT00390000006215 #7 ENSGT00940000161600 #8 ENSGT00950000183094.a #9 ENSGT00390000011497 #11 ENSGT00500000045038.y.b #12 ENSGT00390000018360 #13 ENSGT00390000003103 #14 ENSGT00390000002049.c.a #15 ENSGT00940000156893 #16 ENSGT00950000182907.a.a #17 ENSGT00530000063760.b #18 ENSGT00550000075028 #19 ENSGT00940000159172 #20 ENSGT00940000160276 #21 ENSGT00870000136537.o #22 ENSGT00950000182940.b.a.b #23 ENSGT00510000048165 #24 ENSGT00940000153118.db.a.a.b.a.b #25 ENSGT00940000153118.db.a.a.b.a.a #26 ENSGT01100000263575.B.t.a.a.a ##29 ENSGT01100000263559.B #35 ENSGT00940000156302 #30 ENSGT01100000263559.A.f.e ##35 ENSGT01060000248528.b.kh.yb.b.b.a.a ##34 ENSGT01100000263506.a.e.b #36 ENSGT01050000244808.A.b.b.a #37 ENSGT00950000183112.b.b ENSGT00940000158522 ENSGT01060000248645 ENSGT00390000012355.B.b Cebidae ANCESTRAL SPECIES 12 ENSGT00910000147146 ENSGT00390000006215 #7 ENSGT00940000161600 #8 ENSGT00950000183094.a #9 ENSGT00390000011497 #11 ENSGT00500000045038.y.b #12 ENSGT00390000018360 #13 ENSGT00390000003103 #14 ENSGT00390000002049.c.a #15 ENSGT00940000156893 #16 ENSGT00950000182907.a.a #17 ENSGT00530000063760.b #18 ENSGT00550000075028 #19 ENSGT00940000159172 #20 ENSGT00940000160276 #21 ENSGT00870000136537.o #22 ENSGT00950000182940.b.a.b #23 ENSGT00510000048165 #24 ENSGT00940000153118.db.a.a.b.a.b #25 ENSGT00940000153118.db.a.a.b.a.a #26 ENSGT01100000263575.B.t.a.a.a ##29 ENSGT01100000263559.B #35 ENSGT00940000156302 #30 ENSGT01100000263559.A.f.e ##35 ENSGT01060000248528.b.kh.yb.b.b.a.a ##34 ENSGT01100000263506.a.e.b #36 ENSGT01050000244808.A.b.b.a #37 ENSGT00950000183112.b.b ENSGT00940000158522 ENSGT01060000248645 ENSGT00390000012355.B.b Cebidae_a ANCESTRAL SPECIES 6 ENSGT00910000147146 ENSGT00390000006215 #7 ENSGT00940000161600 #8 ENSGT00950000183094.a #9 ENSGT00390000011497 #11 ENSGT00500000045038.y.b #12 ENSGT00390000018360 #13 ENSGT00390000003103 #14 ENSGT00390000002049.c.a #15 ENSGT00940000156893 #16 ENSGT00950000182907.a.a #17 ENSGT00530000063760.b #18 ENSGT00550000075028 #19 ENSGT00940000159172 #20 ENSGT00940000160276 #21 ENSGT00870000136537.o #22 ENSGT00950000182940.b.a.b #23 ENSGT00940000153118.db.a.a.b.a.b #25 ENSGT00940000153118.db.a.a.b.a.a #26 ENSGT01100000263575.B.t.a.a.a ##29 ENSGT01100000263559.B #35 ENSGT00940000156302 #30 ENSGT01100000263559.A.f.e ##35 ENSGT01100000263506.a.e.b #36 ENSGT01050000244808.A.b.b.a #37 Capuchin MODERN SPECIES 188 ADAMTSL4 (ENSCCAG00000026279) ENSCCAG00000027383 ECM1 (ENSCCAG00000026093) #7 TARS2 (ENSCCAG00000034305) #8 RPRD2 (ENSCCAG00000032422) #9 PRPF3 (ENSCCAG00000026380) #11 CIART (ENSCCAG00000027921) #13 C1orf54 (ENSCCAG00000032327) #14 APH1A (ENSCCAG00000036376) #15 CA14 (ENSCCAG00000023681) #16 ENSCCAG00000020910 PLEKHO1 (ENSCCAG00000033185) #18 VPS45 (ENSCCAG00000037065) #19 OTUD7B (ENSCCAG00000036948) #20 MTMR11 (ENSCCAG00000035057) #21 ENSCCAG00000021751 #22 SV2A (ENSCCAG00000035849) #23 H2AC21 (ENSCCAG00000020094) #25 H2AC20 (ENSCCAG00000005773) #26 H2BC21 (ENSCCAG00000020545) ##29 ENSCCAG00000034681 ENSCCAG00000000823 ##35 ENSCCAG00000026615 #30 H2AC18 (ENSCCAG00000020282) #30 ENSCCAG00000013177 ##35 ENSCCAG00000029951 H2BC18 (ENSCCAG00000036311) #36 ENSCCAG00000036223 #37 Bolivian squirrel monkey MODERN SPECIES 194 ENSSBOG00000003745 ECM1 (ENSSBOG00000031851) #7 TARS2 (ENSSBOG00000001108) #8 RPRD2 (ENSSBOG00000020427) #9 PRPF3 (ENSSBOG00000033104) #11 MRPS21 (ENSSBOG00000000667) #12 CIART (ENSSBOG00000024903) #13 C1orf54 (ENSSBOG00000013160) #14 APH1A (ENSSBOG00000025150) #15 CA14 (ENSSBOG00000024949) #16 ANP32E (ENSSBOG00000033935) #17 PLEKHO1 (ENSSBOG00000031989) #18 VPS45 (ENSSBOG00000029517) #19 OTUD7B (ENSSBOG00000022601) #20 MTMR11 (ENSSBOG00000018459) #21 ENSSBOG00000012310 #22 SV2A (ENSSBOG00000030706) #23 H2AC21 (ENSSBOG00000017659) #25 H2AC20 (ENSSBOG00000019840) #26 ENSSBOG00000008360 #31 ENSSBOG00000015704 ##34 ENSSBOG00000014986 #35 H2AC19 (ENSSBOG00000019167) #30 H3-7 (ENSSBOG00000018931) ##35 H2BC18 (ENSSBOG00000030913) #36 FCGR1A (ENSSBOG00000035681) #37 Marmoset MODERN SPECIES 9 ECM1 (ENSCJAG00000006499) #7 TARS2 (ENSCJAG00000006429) #8 MCL1 (ENSCJAG00000006605) RPRD2 (ENSCJAG00000006424) #9 PRPF3 (ENSCJAG00000009926) #11 MRPS21 (ENSCJAG00000041203) #12 CIART (ENSCJAG00000009905) #13 C1orf54 (ENSCJAG00000009890) #14 APH1A (ENSCJAG00000009786) #15 CA14 (ENSCJAG00000009756) #16 ANP32E (ENSCJAG00000009710) #17 PLEKHO1 (ENSCJAG00000000867) #18 VPS45 (ENSCJAG00000000845) #19 OTUD7B (ENSCJAG00000000821) #20 MTMR11 (ENSCJAG00000000802) #21 SF3B4 (ENSCJAG00000042351) #22 SV2A (ENSCJAG00000000779) #23 BOLA1 (ENSCJAG00000044018) #24 H2AC20 (ENSCJAG00000048427) #26 H2BC21 (ENSCJAG00000081464) #29 ENSCJAG00000086954 ##34 ENSCJAG00000078934 #35 ENSCJAG00000078694 #30 H2AC18 (ENSCJAG00000073890) #30 ENSCJAG00000083438 ##35 ENSCJAG00000087228 ##34 H2BC18 (ENSCJAG00000041683) #36 ENSCJAG00000074017 FCGR1A (ENSCJAG00000000771) #37 ENSCJAG00000069867 ENSCJAG00000084089 Mas night monkey MODERN SPECIES 784 ADAMTSL4 (ENSANAG00000019112) ECM1 (ENSANAG00000031765) #7 TARS2 (ENSANAG00000019620) #8 RPRD2 (ENSANAG00000019468) #9 PRPF3 (ENSANAG00000026138) #11 ENSANAG00000026132 #12 CIART (ENSANAG00000030418) #13 C1orf54 (ENSANAG00000023731) #14 APH1A (ENSANAG00000030676) #15 CA14 (ENSANAG00000026566) #16 ENSANAG00000029309 #17 PLEKHO1 (ENSANAG00000036370) #18 VPS45 (ENSANAG00000034854) #19 OTUD7B (ENSANAG00000021683) #20 MTMR11 (ENSANAG00000019298) #21 SF3B4 (ENSANAG00000031025) #22 SV2A (ENSANAG00000028972) #23 H2AC21 (ENSANAG00000018246) #25 H2AC20 (ENSANAG00000000357) #26 H2BC21 (ENSANAG00000020035) #29 Platyrrhini ANCESTRAL SPECIES ENSGT00870000136537.p #22 Cebidae ANCESTRAL SPECIES ENSGT00870000136537.p #22 Cebidae_a ANCESTRAL SPECIES 83 ENSGT00940000162044 ENSGT00940000162406 ENSGT00390000003288 ENSGT00870000136537.p #22 ENSGT00950000183026.A.a.b ENSGT00940000158770 ENSGT00510000046908.a.a.a ENSGT00940000161754 ENSGT00940000162678 ENSGT00390000009443 ENSGT00390000006954 ENSGT00390000002792 ENSGT00950000183027.a.a ENSGT00950000183054.a.a.b ENSGT00940000157857 ENSGT00390000000703.g.a.a.b ENSGT00390000008961 ENSGT00730000111382 ENSGT00940000157656.a Capuchin MODERN SPECIES 539 SLC36A2 (ENSCCAG00000021772) SLC36A3 (ENSCCAG00000027595) GM2A (ENSCCAG00000022619) ENSCCAG00000019823 #22 CCDC69 (ENSCCAG00000025195) EIF6 (ENSCCAG00000034662) ENSCCAG00000031429 ENSCCAG00000030197 ANXA6 (ENSCCAG00000037580) ENSCCAG00000025737 ENSCCAG00000019616 GPX3 (ENSCCAG00000022622) ENSCCAG00000033101 ZNF300 (ENSCCAG00000000284) SMIM3 (ENSCCAG00000018371) DCTN4 (ENSCCAG00000034471) RBM22 (ENSCCAG00000033546) MYOZ3 (ENSCCAG00000020650) SYNPO (ENSCCAG00000020535) Bolivian squirrel monkey MODERN SPECIES 103 GRIA1 (ENSSBOG00000035431) NMUR2 (ENSSBOG00000030249) GLRA1 (ENSSBOG00000030214) G3BP1 (ENSSBOG00000029969) ATOX1 (ENSSBOG00000017626) ENSSBOG00000026315 SPARC (ENSSBOG00000030157) FAT2 (ENSSBOG00000022466) SLC36A1 (ENSSBOG00000025643) ENSSBOG00000028038 NUDT1 (ENSSBOG00000033662) ENSSBOG00000020482 SLC36A2 (ENSSBOG00000036047) SLC36A3 (ENSSBOG00000017155) GM2A (ENSSBOG00000013460) ENSSBOG00000025174 #22 CCDC69 (ENSSBOG00000021927) ANXA6 (ENSSBOG00000026080) TNIP1 (ENSSBOG00000034852) ENSSBOG00000021123 ENSSBOG00000033460 ZNF300 (ENSSBOG00000025368) SMIM3 (ENSSBOG00000010584) DCTN4 (ENSSBOG00000032220) ENSSBOG00000035400 MYOZ3 (ENSSBOG00000032839) SYNPO (ENSSBOG00000025452) NDST1 (ENSSBOG00000018856) ENSSBOG00000028782 CD74 (ENSSBOG00000024664) TCOF1 (ENSSBOG00000026594) Tarsier MODERN SPECIES 3538 ENSTSYG00000011379 ##37 HSPA6 (ENSTSYG00000012894) FCGR2A (ENSTSYG00000012892) ##37 OTUD7B (ENSTSYG00000009314) #20 MTMR11 (ENSTSYG00000009301) #21 SF3B4 (ENSTSYG00000009295) #22 SV2A (ENSTSYG00000007821) #23 H2AC21 (ENSTSYG00000035796) #25 H2AC20 (ENSTSYG00000026869) #26 ENSTSYG00000035439 #29 Strepsirrhini ANCESTRAL SPECIES ENSGT00940000161136 ENSGT00390000006215 #7 ENSGT00940000161600 #8 ENSGT00950000183094.a #9 ENSGT00390000011497 #11 ENSGT00500000045038 #12 ENSGT00390000018360 #13 ENSGT00390000003103 #14 ENSGT00390000002049.c.a #15 ENSGT00940000156893 #16 ENSGT00950000182907.a.a #17 ENSGT00530000063760.b #18 ENSGT00550000075028 #19 ENSGT00940000159172 #20 ENSGT00940000160276 #21 ENSGT00870000136537 #22 ENSGT00950000182940.b.a.b #23 ENSGT00510000048165 #24 ENSGT00940000153118.db.a.a.b.a.b #25 ENSGT00940000153118.db.a.a.b.a.a #26 ENSGT00940000153125.B ENSGT01100000263506.a.e.b #36 ENSGT01050000244808.A.b.b.a #37 ENSGT00950000183190.a.b.a.b ENSGT00420000029746.f ENSGT00950000183112.b.b ENSGT00940000158522 ENSGT01060000248645 ENSGT00390000012355.B.b ENSGT00390000005869.a ENSGT00730000111185 Lemuriformes ANCESTRAL SPECIES 11 ENSGT00940000161136 ENSGT00390000006215 #7 ENSGT00940000161600 #8 ENSGT00950000183094.a #9 ENSGT00390000011497 #11 ENSGT00500000045038 #12 ENSGT00390000018360 #13 ENSGT00390000003103 #14 ENSGT00390000002049.c.a #15 ENSGT00940000156893 #16 ENSGT00950000182907.a.a #17 ENSGT00530000063760.b #18 ENSGT00550000075028 #19 ENSGT00940000159172 #20 ENSGT00940000160276 #21 ENSGT00870000136537 #22 ENSGT00950000182940.b.a.b #23 ENSGT00510000048165 #24 ENSGT00940000153118.db.a.a.b.a.a #26 Lemuriformes_a ANCESTRAL SPECIES 19 ENSGT00940000161136 ENSGT00390000006215 #7 ENSGT00940000161600 #8 ENSGT00950000183094.a #9 ENSGT00390000011497 #11 ENSGT00500000045038 #12 ENSGT00390000018360 #13 ENSGT00390000003103 #14 ENSGT00390000002049.c.a #15 ENSGT00940000156893 #16 ENSGT00950000182907.a.a #17 ENSGT00530000063760.b #18 ENSGT00550000075028 #19 ENSGT00940000159172 #20 ENSGT00940000160276 #21 ENSGT00870000136537 #22 ENSGT00950000182940.b.a.b #23 ENSGT00510000048165 #24 ENSGT00940000153118.db.a.a.b.a.a #26 ENSGT01100000263559.A.f.e ##35 ENSGT00940000156302 #30 ENSGT01100000263575.B.u #29 ENSGT01100000263548.a.b.b Coquerels sifaka MODERN SPECIES 750 ECM1 (ENSPCOG00000027232) #7 TARS2 (ENSPCOG00000017247) #8 RPRD2 (ENSPCOG00000015902) #9 ENSPCOG00000022424 PRPF3 (ENSPCOG00000013828) #11 ENSPCOG00000023504 #12 CIART (ENSPCOG00000018797) #13 C1orf54 (ENSPCOG00000006128) #14 APH1A (ENSPCOG00000016266) #15 CA14 (ENSPCOG00000025811) #16 ANP32E (ENSPCOG00000022218) #17 PLEKHO1 (ENSPCOG00000027826) #18 VPS45 (ENSPCOG00000011875) #19 OTUD7B (ENSPCOG00000028177) #20 MTMR11 (ENSPCOG00000027870) #21 SF3B4 (ENSPCOG00000015399) #22 SV2A (ENSPCOG00000018151) #23 H2AC20 (ENSPCOG00000011857) #26 H2BC21 (ENSPCOG00000010375) #29 ENSPCOG00000012693 ##35 ENSPCOG00000011625 #30 ENSPCOG00000005500 #30 ENSPCOG00000011101 ##34 H3C13 (ENSPCOG00000011308) #35 FCGR1A (ENSPCOG00000016186) #37 ENSPCOG00000015554 Greater bamboo lemur MODERN SPECIES 2 CIART (ENSPSMG00000003456) #13 C1orf54 (ENSPSMG00000003448) #14 APH1A (ENSPSMG00000003429) #15 CA14 (ENSPSMG00000003385) #16 ANP32E (ENSPSMG00000003345) #17 ENSPSMG00000003282 PLEKHO1 (ENSPSMG00000003272) #18 VPS45 (ENSPSMG00000003172) #19 OTUD7B (ENSPSMG00000003110) #20 MTMR11 (ENSPSMG00000003093) #21 SF3B4 (ENSPSMG00000003047) #22 Mouse lemur MODERN SPECIES 11 TARS2 (ENSMICG00000008016) #8 RPRD2 (ENSMICG00000007991) #9 PRPF3 (ENSMICG00000015386) #11 ENSMICG00000046505 #12 CIART (ENSMICG00000015355) #13 C1orf54 (ENSMICG00000015318) #14 APH1A (ENSMICG00000015279) #15 CA14 (ENSMICG00000045466) #16 ENSMICG00000034870 ANP32E (ENSMICG00000015265) #17 PLEKHO1 (ENSMICG00000027313) #18 VPS45 (ENSMICG00000015188) #19 ENSMICG00000035294 OTUD7B (ENSMICG00000047179) #20 MTMR11 (ENSMICG00000000298) #21 SF3B4 (ENSMICG00000044961) #22 SV2A (ENSMICG00000000293) #23 H2BC21 (ENSMICG00000044053) #29 H2AC20 (ENSMICG00000048145) #26 ENSMICG00000044581 ENSMICG00000043363 #31 H2AC18 (ENSMICG00000043969) #30 ENSMICG00000046339 ##34 ENSMICG00000045632 #35 FCGR1A (ENSMICG00000033541) #37 ENSMICG00000029326 HJV (ENSMICG00000037948) TXNIP (ENSMICG00000038247) POLR3GL (ENSMICG00000034663) ANKRD34A (ENSMICG00000044107) LIX1L (ENSMICG00000043095) Bushbaby MODERN SPECIES 289 MCL1 (ENSOGAG00000016421) ADAMTSL4 (ENSOGAG00000006696) ECM1 (ENSOGAG00000005365) #7 TARS2 (ENSOGAG00000005360) #8 RPRD2 (ENSOGAG00000029308) #9 ENSOGAG00000028162 PRPF3 (ENSOGAG00000005352) #11 CIART (ENSOGAG00000004846) #13 APH1A (ENSOGAG00000004843) #15 CA14 (ENSOGAG00000004842) #16 ANP32E (ENSOGAG00000004841) #17 PLEKHO1 (ENSOGAG00000006275) #18 VPS45 (ENSOGAG00000006271) #19 OTUD7B (ENSOGAG00000030526) #20 MTMR11 (ENSOGAG00000006266) #21 SF3B4 (ENSOGAG00000006265) #22 SV2A (ENSOGAG00000006260) #23 BOLA1 (ENSOGAG00000032964) #24 H2AC21 (ENSOGAG00000006258) #25 H2AC20 (ENSOGAG00000006256) #26 ENSOGAG00000006255 #29 ENSOGAG00000027485 ##34 H3-7 (ENSOGAG00000006253) ##35 H2BC18 (ENSOGAG00000032731) #36 FCGR1A (ENSOGAG00000014101) #37 ENSOGAG00000024879 ENSOGAG00000028082 Euarchontoglires_A ANCESTRAL SPECIES ENSGT00940000161136 ENSGT00390000006215 #7 ENSGT00940000161600 #8 ENSGT00950000183094.a #9 ENSGT00390000011497 #11 ENSGT00500000045038 #12 ENSGT00390000018360 #13 ENSGT00390000003103 #14 ENSGT00390000002049.c.a #15 ENSGT00940000156893 #16 ENSGT00950000182907.a.a #17 ENSGT00530000063760.b #18 ENSGT00550000075028 #19 ENSGT00940000159172 #20 ENSGT00940000160276 #21 ENSGT00870000136537 #22 ENSGT00950000182940.b.a.b #23 ENSGT00510000048165 #24 ENSGT00940000153118.db.a.a.b.a.b #25 ENSGT00940000153118.db.a.a.b.a.a #26 ENSGT01100000263575.B.u #29 ENSGT01100000263559.B #35 ENSGT00940000156302 #30 ENSGT01100000263575.A #31 ENSGT00940000153092.a.a.c.a.a ENSGT01100000263559.A.f.e ##35 ENSGT01100000263506.a.e.b #36 ENSGT01050000244808.A.b.b.a #37 ENSGT00950000183190.a.b.a.b ENSGT00420000029746.f ENSGT00950000183112.b.b Glires ANCESTRAL SPECIES ENSGT00940000161136 ENSGT00390000006215 #7 ENSGT00940000161600 #8 ENSGT00950000183094.a #9 ENSGT00390000011497 #11 ENSGT00500000045038 #12 ENSGT00390000018360 #13 ENSGT00390000003103 #14 ENSGT00390000002049.c.a #15 ENSGT00940000156893 #16 ENSGT00950000182907.a.a #17 ENSGT00530000063760.b #18 ENSGT00550000075028 #19 ENSGT00940000159172 #20 ENSGT00940000160276 #21 ENSGT00870000136537 #22 ENSGT00950000182940.b.a.b #23 ENSGT00510000048165 #24 ENSGT00940000153118.db.a.a.b.a.b #25 ENSGT00940000153118.db.a.a.b.a.a #26 ENSGT01100000263575.B.u #29 ENSGT01100000263559.B #35 ENSGT00940000156302 #30 ENSGT01100000263575.A #31 ENSGT00940000153092.a.a.c.a.a ENSGT01100000263559.A.f.e ##35 ENSGT01100000263506.a.e.b #36 ENSGT01050000244808.A.b.b.a #37 ENSGT00950000183190.a.b.a.b ENSGT00420000029746.f ENSGT00950000183112.b.b Rodentia ANCESTRAL SPECIES ENSGT00940000161136 ENSGT00390000006215 #7 ENSGT00940000161600 #8 ENSGT00950000183094.a #9 ENSGT00390000011497 #11 ENSGT00500000045038 #12 ENSGT00390000018360 #13 ENSGT00390000003103 #14 ENSGT00390000002049.c.a #15 ENSGT00940000156893 #16 ENSGT00950000182907.a.a #17 ENSGT00530000063760.b #18 ENSGT00550000075028 #19 ENSGT00940000159172 #20 ENSGT00940000160276 #21 ENSGT00870000136537 #22 ENSGT00950000182940.b.a.b #23 ENSGT00510000048165 #24 ENSGT00940000153118.db.a.a.b.a.b #25 ENSGT00940000153118.db.a.a.b.a.a #26 ENSGT01100000263575.B.u #29 ENSGT01100000263506.a.e.a.a.a.a.a.r.b ##36 ENSGT01100000263506.a.e.a.a.a.b.a.a.a.s ##36 ENSGT00940000153125.E.c.b ENSGT01100000263514.A.e.a.b.a.b.a.b ENSGT01100000263514.A.e.a.b.a.b.a.a.b ENSGT00940000162950 ENSGT01020000230360.c.b.a.b.b.d ENSGT01100000263506.a.e.a.a.a.b.a.a.b.a.a ##36 ENSGT00940000163525 ENSGT01060000248528.b.jh.a.b ##34 Rodentia_A ANCESTRAL SPECIES ENSGT00940000161136 ENSGT00390000006215 #7 ENSGT00940000161600 #8 ENSGT00950000183094.a #9 ENSGT00390000011497 #11 ENSGT00500000045038 #12 ENSGT00390000018360 #13 ENSGT00390000003103 #14 ENSGT00390000002049.c.a #15 ENSGT00940000156893 #16 ENSGT00950000182907.a.a #17 ENSGT00530000063760.b #18 ENSGT00550000075028 #19 ENSGT00940000159172 #20 ENSGT00940000160276 #21 ENSGT00870000136537 #22 ENSGT00950000182940.b.a.b #23 ENSGT00510000048165 #24 ENSGT00940000153118.db.a.a.b.a.b #25 ENSGT00940000153118.db.a.a.b.a.a #26 ENSGT01100000263575.B.u #29 ENSGT00940000156302 #30 ENSGT01100000263575.A #31 ENSGT00940000153092.a.a.c.a.a ENSGT01100000263559.B #35 ENSGT00940000163082 ENSGT00940000160426 ENSGT01100000263559.A.f.e ##35 ENSGT01100000263506.a.e.b #36 ENSGT01050000244808.A.b.b.a #37 ENSGT00950000183112.b.b Hystricomorpha ANCESTRAL SPECIES 23 ENSGT00940000161136 ENSGT00390000006215 #7 ENSGT00940000161600 #8 ENSGT00950000183094.a #9 ENSGT00390000011497 #11 ENSGT00500000045038 #12 ENSGT00390000018360 #13 ENSGT00390000003103 #14 ENSGT00390000002049.c.a #15 ENSGT00940000156893 #16 ENSGT00950000182907.a.a #17 ENSGT00530000063760.b #18 ENSGT00550000075028 #19 ENSGT00940000159172 #20 ENSGT00940000160276 #21 ENSGT00870000136537 #22 ENSGT00950000182940.b.a.b #23 ENSGT00510000048165 #24 ENSGT00940000153118.db.a.a.b.a.b #25 ENSGT00940000153118.db.a.a.b.a.a #26 ENSGT01100000263575.B.u #29 ENSGT00940000156302 #30 ENSGT01100000263559.A.f.e ##35 ENSGT01100000263506.a.e.b #36 ENSGT01050000244808.A.b.b.a #37 ENSGT00950000183112.b.b ENSGT00940000158522 ENSGT01100000264175 ENSGT00390000012355.B.b ENSGT00390000005869.a ENSGT00730000111185 Hystricomorpha_a ANCESTRAL SPECIES 59 ENSGT00940000161136 ENSGT00390000006215 #7 ENSGT00940000161600 #8 ENSGT00950000183094.a #9 ENSGT00390000011497 #11 ENSGT00500000045038 #12 ENSGT00940000164936 ENSGT00390000003103 #14 ENSGT00390000002049.c.a #15 ENSGT00940000156893 #16 ENSGT00950000182907.a.a #17 ENSGT00530000063760.b #18 ENSGT00550000075028 #19 ENSGT00940000159172 #20 ENSGT00940000160276 #21 ENSGT00870000136537 #22 ENSGT00950000182940.b.a.b #23 ENSGT00510000048165 #24 ENSGT00940000153118.db.a.a.b.a.b #25 ENSGT00940000153118.db.a.a.b.a.a #26 ENSGT01100000263575.B.u #29 ENSGT00940000156302 #30 ENSGT01100000263559.A.f.e ##35 ENSGT01100000263506.a.e.b #36 ENSGT01050000244808.A.b.b.a #37 Hystricomorpha_b ANCESTRAL SPECIES 79 ENSGT00940000161136 ENSGT00390000006215 #7 ENSGT00940000161600 #8 ENSGT00950000183094.a #9 ENSGT00390000011497 #11 ENSGT00500000045038 #12 ENSGT00940000164936 ENSGT00390000003103 #14 ENSGT00390000002049.c.a #15 ENSGT00940000156893 #16 ENSGT00950000182907.a.a #17 ENSGT00530000063760.b #18 ENSGT00550000075028 #19 ENSGT00940000159172 #20 ENSGT00940000160276 #21 ENSGT00870000136537 #22 ENSGT00950000182940.b.a.b #23 ENSGT00510000048165 #24 ENSGT00940000153118.db.a.a.b.a.b #25 ENSGT00940000153118.db.a.a.b.a.a #26 Degu DUPLICATION Degu MODERN SPECIES 204 ENSODEG00000003103 OPRD1 (ENSODEG00000003121) ENSODEG00000018881 ENSODEG00000018892 ENSODEG00000003178 ENSODEG00000003196 TMEM200B (ENSODEG00000003209) SRSF4 (ENSODEG00000003230) MECR (ENSODEG00000003260) PTPRU (ENSODEG00000003405) MATN1 (ENSODEG00000003275) LAPTM5 (ENSODEG00000003300) ENSODEG00000003328 SDC3 (ENSODEG00000003364) PUM1 (ENSODEG00000003465) ENSODEG00000003597 #22 NKAIN1 (ENSODEG00000003633) SNRNP40 (ENSODEG00000003666) ENSODEG00000003683 FABP3 (ENSODEG00000003694) SERINC2 (ENSODEG00000003724) TINAGL1 (ENSODEG00000003816) HCRTR1 (ENSODEG00000003919) PEF1 (ENSODEG00000003947) COL16A1 (ENSODEG00000004050) ADGRB2 (ENSODEG00000004337) ENSODEG00000004641 ENSODEG00000004659 ENSODEG00000004690 ENSODEG00000018961 ENSODEG00000003337 Degu MODERN SPECIES 113 ENSODEG00000009036 VPS53 (ENSODEG00000008148) TLCD3A (ENSODEG00000010651) GEMIN4 (ENSODEG00000008498) ENSODEG00000008953 MRM3 (ENSODEG00000009411) NXN (ENSODEG00000009835) TIMM22 (ENSODEG00000010287) ABR (ENSODEG00000009247) ENSODEG00000009619 TRARG1 (ENSODEG00000009480) ENSODEG00000010596 ENSODEG00000008935 ENSODEG00000008756 ENSODEG00000019521 ENSODEG00000008916 #22 TMIGD1 (ENSODEG00000009572) BLMH (ENSODEG00000009638) SLC6A4 (ENSODEG00000008634) ENSODEG00000019721 NSRP1 (ENSODEG00000009225) EFCAB5 (ENSODEG00000010381) SSH2 (ENSODEG00000009157) ENSODEG00000009040 ENSODEG00000019652 CORO6 (ENSODEG00000009805) ANKRD13B (ENSODEG00000009365) GIT1 (ENSODEG00000009604) TP53I13 (ENSODEG00000012662) ABHD15 (ENSODEG00000010919) TAOK1 (ENSODEG00000010217) Long-tailed chinchilla MODERN SPECIES 120 ADAMTSL4 (ENSCLAG00000013321) ECM1 (ENSCLAG00000016478) #7 TARS2 (ENSCLAG00000017274) #8 RPRD2 (ENSCLAG00000013296) #9 PRPF3 (ENSCLAG00000015009) #11 MRPS21 (ENSCLAG00000013383) #12 ENSCLAG00000011743 C1orf54 (ENSCLAG00000012077) #14 APH1A (ENSCLAG00000013532) #15 CA14 (ENSCLAG00000015749) #16 ANP32E (ENSCLAG00000016237) #17 PLEKHO1 (ENSCLAG00000011850) #18 VPS45 (ENSCLAG00000013589) #19 OTUD7B (ENSCLAG00000015021) #20 MTMR11 (ENSCLAG00000014280) #21 SF3B4 (ENSCLAG00000015851) #22 SV2A (ENSCLAG00000014270) #23 BOLA1 (ENSCLAG00000014314) #24 H2AC21 (ENSCLAG00000017864) #25 H2AC20 (ENSCLAG00000017761) #26 H2BC21 (ENSCLAG00000017898) #29 ENSCLAG00000017827 H3-7 (ENSCLAG00000011860) ##35 ENSCLAG00000018054 ##34 H2BC18 (ENSCLAG00000017913) #36 FCGR1A (ENSCLAG00000012978) #37 ENSCLAG00000013809 ENSCLAG00000013150 PRMT8 (ENSCLAG00000014521) CRACR2A (ENSCLAG00000013246) PARP11 (ENSCLAG00000012852) Guinea pig MODERN SPECIES 2 ADAMTSL4 (ENSCPOG00000011954) ECM1 (ENSCPOG00000010599) #7 ENSCPOG00000010586 #8 RPRD2 (ENSCPOG00000040179) #9 PRPF3 (ENSCPOG00000008068) #11 MRPS21 (ENSCPOG00000020443) #12 ENSCPOG00000035575 C1orf54 (ENSCPOG00000026169) #14 APH1A (ENSCPOG00000006509) #15 CA14 (ENSCPOG00000006079) #16 ANP32E (ENSCPOG00000013941) #17 PLEKHO1 (ENSCPOG00000021117) #18 VPS45 (ENSCPOG00000002536) #19 OTUD7B (ENSCPOG00000001517) #20 MTMR11 (ENSCPOG00000008271) #21 SF3B4 (ENSCPOG00000008267) #22 SV2A (ENSCPOG00000010250) #23 BOLA1 (ENSCPOG00000010247) #24 H2AC21 (ENSCPOG00000030869) #25 H2AC20 (ENSCPOG00000036942) #26 ENSCPOG00000034161 #29 ENSCPOG00000033740 ##35 ENSCPOG00000034514 #30 ENSCPOG00000031424 #29 ENSCPOG00000030965 #29 ENSCPOG00000031270 #30 ENSCPOG00000030241 ##34 ENSCPOG00000037353 ##35 H2BC18 (ENSCPOG00000030049) #36 ENSCPOG00000033096 ENSCPOG00000040788 Naked mole-rat female DUPLICATION Naked mole-rat female MODERN SPECIES 10 RPRD2 (ENSHGLG00000013969) #9 PRPF3 (ENSHGLG00000016569) #11 MRPS21 (ENSHGLG00000016350) #12 CIART (ENSHGLG00000016271) #13 ENSHGLG00000045708 C1orf54 (ENSHGLG00000016156) #14 APH1A (ENSHGLG00000009612) #15 CA14 (ENSHGLG00000035588) #16 ENSHGLG00000032045 ENSHGLG00000005468 #17 ENSHGLG00000015344 PLEKHO1 (ENSHGLG00000046314) #18 VPS45 (ENSHGLG00000018897) #19 OTUD7B (ENSHGLG00000019136) #20 MTMR11 (ENSHGLG00000013532) #21 SF3B4 (ENSHGLG00000012360) #22 SV2A (ENSHGLG00000011320) #23 BOLA1 (ENSHGLG00000033803) #24 ENSHGLG00000039058 ENSHGLG00000015936 #29 ENSHGLG00000036146 ##35 HIST1H4I (ENSHGLG00000040309) ##34 ENSHGLG00000040039 #36 ENSHGLG00000038422 ENSHGLG00000009060 #37 ENSHGLG00000035132 ENSHGLG00000005199 ANKRD34A (ENSHGLG00000009270) ENSHGLG00000005879 LIX1L (ENSHGLG00000008928) RBM8A (ENSHGLG00000033593) Naked mole-rat female MODERN SPECIES 6 E2F1 (ENSHGLG00000009301) ENSHGLG00000041428 PXMP4 (ENSHGLG00000016991) ZNF341 (ENSHGLG00000013786) ENSHGLG00000041357 ENSHGLG00000032344 ENSHGLG00000042490 RALY (ENSHGLG00000017779) ENSHGLG00000031940 AHCY (ENSHGLG00000009751) ITCH (ENSHGLG00000005001) ENSHGLG00000010397 MAP1LC3A (ENSHGLG00000009257) ENSHGLG00000008565 TP53INP2 (ENSHGLG00000033209) ENSHGLG00000020370 #22 ENSHGLG00000005296 GGT7 (ENSHGLG00000007389) ACSS2 (ENSHGLG00000013444) ENSHGLG00000049123 GSS (ENSHGLG00000013619) TRPC4AP (ENSHGLG00000015614) ENSHGLG00000011522 EDEM2 (ENSHGLG00000039402) ENSHGLG00000036931 PROCR (ENSHGLG00000009583) MMP24 (ENSHGLG00000046205) EIF6 (ENSHGLG00000010214) FAM83C (ENSHGLG00000040004) UQCC1 (ENSHGLG00000017446) ENSHGLG00000021218 Sciuridae ANCESTRAL SPECIES ENSGT00940000161136 ENSGT00390000006215 #7 ENSGT00940000161600 #8 ENSGT00950000183094.a #9 ENSGT00390000011497 #11 ENSGT00500000045038 #12 ENSGT00390000018360 #13 ENSGT00390000003103 #14 ENSGT00390000002049.c.a #15 ENSGT00940000156893 #16 ENSGT00950000182907.a.a.i.b #17 ENSGT00530000063760.b #18 ENSGT00550000075028.z #19 ENSGT00940000159172 #20 ENSGT00940000160276 #21 ENSGT00870000136537 #22 ENSGT00950000182940.b.a.b #23 ENSGT00510000048165 #24 ENSGT00940000153118.db.a.a.b.a.b #25 ENSGT00940000153118.db.a.a.b.a.a #26 ENSGT01100000263575.B.u #29 ENSGT01100000263506.a.e.b #36 ENSGT01050000244808.A.b.b.a #37 ENSGT00950000183112.b.b ENSGT00940000158522 ENSGT01060000248645 ENSGT00390000012355.B.b ENSGT00390000005869.a ENSGT00730000111185 ENSGT01050000244841.A.a.b ENSGT00390000014273.b Marmotini DUPLICATION Marmotini ANCESTRAL SPECIES 33 ENSGT00390000006215 #7 ENSGT00940000161600 #8 ENSGT00950000183094.a #9 ENSGT00390000011497 #11 ENSGT00500000045038.r #12 ENSGT00940000164936 ENSGT00390000018360 #13 ENSGT00390000003103 #14 ENSGT00390000002049.c.a #15 ENSGT00940000156893 #16 ENSGT00950000182907.a.a.i.b #17 ENSGT00530000063760.b #18 ENSGT00550000075028.z #19 ENSGT00940000159172 #20 ENSGT00940000160276 #21 ENSGT00870000136537.u #22 ENSGT00950000182940.b.a.b #23 ENSGT00510000048165 #24 ENSGT00940000153118.db.a.a.b.a.b #25 ENSGT00940000153118.db.a.a.b.a.a #26 ENSGT01100000263575.B.u #29 ENSGT00940000156302 #30 ENSGT01100000263506.a.e.b #36 ENSGT01050000244808.A.b.b.a #37 ENSGT00950000183190.a.b.a.b ENSGT00420000029746.f Marmotini_b ANCESTRAL SPECIES 77 ENSGT00390000006215 #7 ENSGT00940000161600 #8 ENSGT00950000183094.a #9 ENSGT00390000011497 #11 ENSGT00500000045038.r #12 ENSGT00940000164936 ENSGT00390000018360 #13 ENSGT00390000003103 #14 ENSGT00390000002049.c.a #15 ENSGT00940000156893 #16 ENSGT00950000182907.a.a.i.b #17 ENSGT00530000063760.b #18 ENSGT00550000075028.z #19 ENSGT00940000159172 #20 ENSGT00940000160276 #21 ENSGT00870000136537.u #22 ENSGT00950000182940.b.a.b #23 ENSGT00510000048165 #24 ENSGT00940000153118.db.a.a.b.a.b #25 ENSGT00940000153118.db.a.a.b.a.a #26 ENSGT01100000263575.B.u #29 ENSGT00940000156302 #30 Arctic ground squirrel MODERN SPECIES 298 MCL1 (ENSUPAG00010002404) ADAMTSL4 (ENSUPAG00010002294) ECM1 (ENSUPAG00010002264) #7 TARS2 (ENSUPAG00010001943) #8 RPRD2 (ENSUPAG00010001879) #9 PRPF3 (ENSUPAG00010001860) #11 CIART (ENSUPAG00010001847) #13 C1orf54 (ENSUPAG00010001839) #14 APH1A (ENSUPAG00010001823) #15 CA14 (ENSUPAG00010001770) #16 ENSUPAG00010001759 #17 PLEKHO1 (ENSUPAG00010001743) #18 VPS45 (ENSUPAG00010001671) #19 OTUD7B (ENSUPAG00010001643) #20 MTMR11 (ENSUPAG00010001597) #21 SF3B4 (ENSUPAG00010001576) #22 SV2A (ENSUPAG00010001558) #23 ENSUPAG00010001547 #24 H2AC21 (ENSUPAG00010001539) #25 H2AC20 (ENSUPAG00010001531) #26 H2BC21 (ENSUPAG00010001528) #29 Squirrel MODERN SPECIES 180 ADAMTSL4 (ENSSTOG00000024198) ECM1 (ENSSTOG00000008340) #7 TARS2 (ENSSTOG00000008311) #8 RPRD2 (ENSSTOG00000001895) #9 PRPF3 (ENSSTOG00000001889) #11 ENSSTOG00000019516 #12 ENSSTOG00000024097 C1orf54 (ENSSTOG00000006055) #14 APH1A (ENSSTOG00000006041) #15 CA14 (ENSSTOG00000027815) #16 ENSSTOG00000004170 #17 PLEKHO1 (ENSSTOG00000014249) #18 VPS45 (ENSSTOG00000014236) #19 OTUD7B (ENSSTOG00000026621) #20 MTMR11 (ENSSTOG00000006589) #21 ENSSTOG00000000684 #22 SV2A (ENSSTOG00000006537) #23 H2AC21 (ENSSTOG00000021582) #25 H2AC20 (ENSSTOG00000025400) #26 H2BC21 (ENSSTOG00000028429) #29 ENSSTOG00000022473 #30 ENSSTOG00000030339 #35 ENSSTOG00000028762 #35 FCGR1A (ENSSTOG00000028518) #37 ENSSTOG00000031290 ENSSTOG00000027412 Alpin marmot MODERN SPECIES 85 ENSMMMG00000019337 ADAMTSL4 (ENSMMMG00000019345) ECM1 (ENSMMMG00000019374) #7 TARS2 (ENSMMMG00000019396) #8 RPRD2 (ENSMMMG00000019468) #9 PRPF3 (ENSMMMG00000019495) #11 CIART (ENSMMMG00000019509) #13 C1orf54 (ENSMMMG00000019516) #14 APH1A (ENSMMMG00000019524) #15 CA14 (ENSMMMG00000019528) #16 ENSMMMG00000019537 #17 PLEKHO1 (ENSMMMG00000019549) #18 VPS45 (ENSMMMG00000019551) #19 OTUD7B (ENSMMMG00000019569) #20 MTMR11 (ENSMMMG00000019604) #21 ENSMMMG00000019615 #22 SV2A (ENSMMMG00000019622) #23 H2AC20 (ENSMMMG00000019626) #26 H2BC21 (ENSMMMG00000019629) #29 ENSMMMG00000019631 ##34 ENSMMMG00000019638 ##35 H2BC18 (ENSMMMG00000019640) #36 FCGR1A (ENSMMMG00000019645) #37 ENSMMMG00000019733 Marmotini ANCESTRAL SPECIES 57 ENSGT00940000158024.C ENSGT00940000163736 ENSGT00390000010672 ENSGT00390000006618 ENSGT00940000157516.q.b ENSGT00940000158216 ENSGT00940000162528 ENSGT00940000156285 ENSGT00940000154951 ENSGT00940000154913 ENSGT00940000153710.a.l ENSGT00950000183009 ENSGT00940000163340 ENSGT00940000160680 ENSGT00940000156768 ENSGT00870000136537.v #22 ENSGT00940000160342 ENSGT00470000042284 ENSGT00940000155792 ENSGT00950000182930.C ENSGT00950000182930.A.b ENSGT00950000182930.A.a ENSGT00950000182930.B ENSGT00860000135739 ENSGT00940000153783.b.b.c.a.a.a.a ENSGT00550000074917 ENSGT00940000159828 ENSGT00940000157053 ENSGT00940000161858 ENSGT00950000183084.b.b ENSGT00940000162610 Marmotini_b ANCESTRAL SPECIES 79 ENSGT00940000163736 ENSGT00390000010672 ENSGT00390000006618 ENSGT00910000148595 ENSGT00940000157516.q.a ENSGT00940000158216 ENSGT00940000162528 ENSGT00940000156285 ENSGT00940000154951 ENSGT00940000154913 ENSGT00940000153710.a.l ENSGT00950000183009 ENSGT00940000163340 ENSGT00940000160680 ENSGT00940000156768 ENSGT00870000136537.v #22 ENSGT00940000160342 ENSGT00470000042284 ENSGT00940000155792 ENSGT00950000182930.C ENSGT00950000182930.A.b ENSGT00950000182930.A.a ENSGT00950000182930.B ENSGT00860000135739 ENSGT00940000153783.b.b.c.a.a.a.a ENSGT00550000074917 ENSGT00940000159828 ENSGT00940000157053 ENSGT00940000161858 ENSGT00950000183084.b.b ENSGT00940000162610 Squirrel MODERN SPECIES 178 MAGEF1 (ENSSTOG00000014789) VPS8 (ENSSTOG00000022395) C3orf70 (ENSSTOG00000006003) ENSSTOG00000032120 EHHADH (ENSSTOG00000027701) MAP3K13 (ENSSTOG00000001986) TMEM41A (ENSSTOG00000001995) LIPH (ENSSTOG00000011247) SENP2 (ENSSTOG00000011258) ENSSTOG00000033088 IGF2BP2 (ENSSTOG00000022077) ENSSTOG00000033354 TRA2B (ENSSTOG00000006720) ETV5 (ENSSTOG00000006743) DGKG (ENSSTOG00000006763) ENSSTOG00000029627 #22 CRYGS (ENSSTOG00000027888) TBCCD1 (ENSSTOG00000004471) ENSSTOG00000009449 AHSG (ENSSTOG00000009460) FETUB (ENSSTOG00000012584) HRG (ENSSTOG00000012587) KNG1 (ENSSTOG00000027812) ENSSTOG00000012601 ENSSTOG00000012616 ADIPOQ (ENSSTOG00000016020) ST6GAL1 (ENSSTOG00000015751) RTP1 (ENSSTOG00000010261) MASP1 (ENSSTOG00000010265) ENSSTOG00000010275 SST (ENSSTOG00000015070) Alpin marmot MODERN SPECIES 65 MAGEF1 (ENSMMMG00000008030) VPS8 (ENSMMMG00000008041) ENSMMMG00000008532 ENSMMMG00000008550 MAP3K13 (ENSMMMG00000008557) TMEM41A (ENSMMMG00000008592) LIPH (ENSMMMG00000008606) SENP2 (ENSMMMG00000008647) IGF2BP2 (ENSMMMG00000008674) ENSMMMG00000008702 ENSMMMG00000008709 TRA2B (ENSMMMG00000008720) ENSMMMG00000008729 ETV5 (ENSMMMG00000008749) DGKG (ENSMMMG00000008785) ENSMMMG00000008876 #22 CRYGS (ENSMMMG00000008894) TBCCD1 (ENSMMMG00000008903) DNAJB11 (ENSMMMG00000008924) AHSG (ENSMMMG00000008935) FETUB (ENSMMMG00000008960) HRG (ENSMMMG00000008969) KNG1 (ENSMMMG00000008978) ENSMMMG00000009050 EIF4A2 (ENSMMMG00000009054) RFC4 (ENSMMMG00000009263) ADIPOQ (ENSMMMG00000009299) ENSMMMG00000009302 ST6GAL1 (ENSMMMG00000009312) RTP1 (ENSMMMG00000009324) MASP1 (ENSMMMG00000009332) Eurasian red squirrel MODERN SPECIES ECM1 (ENSSVLG00005001143) #7 TARS2 (ENSSVLG00005001101) #8 RPRD2 (ENSSVLG00005001061) #9 PRPF3 (ENSSVLG00005001025) #11 MRPS21 (ENSSVLG00005001010) #12 CIART (ENSSVLG00005000997) #13 C1orf54 (ENSSVLG00005000974) #14 APH1A (ENSSVLG00005000921) #15 CA14 (ENSSVLG00005000883) #16 ENSSVLG00005000716 #17 PLEKHO1 (ENSSVLG00005000612) #18 ENSSVLG00005000542 #19 ENSSVLG00005000516 OTUD7B (ENSSVLG00005000477) #20 MTMR11 (ENSSVLG00005000407) #21 SF3B4 (ENSSVLG00005000373) #22 SV2A (ENSSVLG00005000231) #23 BOLA1 (ENSSVLG00005000149) #24 H2AC21 (ENSSVLG00005000146) #25 H2AC20 (ENSSVLG00005000144) #26 H2BC21 (ENSSVLG00005000140) #29 H2AC19 (ENSSVLG00005000135) #30 ENSSVLG00005000132 #31 ENSSVLG00005000127 ##29 ENSSVLG00005000124 #30 ENSSVLG00005000095 ##35 ENSSVLG00005000088 ##34 ENSSVLG00005004594 ##35 H2BC18 (ENSSVLG00005004581) #36 FCGR1A (ENSSVLG00005004523) #37 HJV (ENSSVLG00005004426) Rodentia_B ANCESTRAL SPECIES ENSGT00940000161136 ENSGT00390000006215 #7 ENSGT00940000161600 #8 ENSGT00950000183094.a #9 ENSGT00390000011497 #11 ENSGT00500000045038 #12 ENSGT00390000018360 #13 ENSGT00390000003103 #14 ENSGT00390000002049.c.a #15 ENSGT00940000156893 #16 ENSGT00950000182907.a.a #17 ENSGT00530000063760.b #18 ENSGT00550000075028 #19 ENSGT00940000159172 #20 ENSGT00940000160276 #21 ENSGT00870000136537 #22 ENSGT00950000182940.b.a.b #23 ENSGT00510000048165 #24 ENSGT00940000153118.db.a.a.b.a.b #25 ENSGT00940000153118.db.a.a.b.a.a #26 ENSGT01100000263575.B.u #29 ENSGT01100000263506.a.e.a.a.a.a.a.r.b ##36 ENSGT01100000263506.a.e.a.a.a.b.b.b ##36 ENSGT01060000248528.b.kh.xb.a.b ##34 ENSGT01100000263559.A.f.d.a.a ##35 ENSGT00940000156302 #30 ENSGT01060000248528.b.kh.yb.a.b ##34 ENSGT01100000263559.A.f.e ##35 ENSGT01100000263506.a.e.b #36 ENSGT01050000244808.A.b.b.a #37 ENSGT00950000183112.b.b Myomorpha ANCESTRAL SPECIES 12 ENSGT00940000161136 ENSGT00390000006215 #7 ENSGT00940000161600 #8 ENSGT00950000183094.a #9 ENSGT00390000011497 #11 ENSGT00500000045038 #12 ENSGT00390000018360 #13 ENSGT00390000003103 #14 ENSGT00390000002049.c.a #15 ENSGT00940000156893 #16 ENSGT00950000182907.a.a #17 ENSGT00530000063760.b #18 ENSGT00550000075028 #19 ENSGT00940000159172 #20 ENSGT00940000160276 #21 ENSGT00870000136537 #22 ENSGT00950000182940.b.a.b #23 ENSGT00510000048165 #24 ENSGT00940000153118.db.a.a.b.a.b #25 ENSGT00940000153118.db.a.a.b.a.a #26 ENSGT01100000263575.B.u #29 ENSGT01100000263506.a.e.a.a.a.a.a.r.b ##36 ENSGT01100000263506.a.e.a.a.a.b.b.b ##36 ENSGT01060000248528.b.kh.xb.a.b ##34 ENSGT01100000263559.A.f.d.a.a ##35 ENSGT00940000156302 #30 ENSGT01060000248528.b.kh.yb.a.b ##34 ENSGT01100000263559.A.f.e ##35 ENSGT01100000263506.a.e.b #36 ENSGT01050000244808.A.b.b.a #37 ENSGT00950000183112.b.b Muroidea ANCESTRAL SPECIES 6 ENSGT00940000161136 ENSGT00390000006215 #7 ENSGT00940000161600 #8 ENSGT00950000183094.a #9 ENSGT00390000011497 #11 ENSGT00500000045038 #12 ENSGT00390000018360 #13 ENSGT00390000003103 #14 ENSGT00390000002049.c.a #15 ENSGT00940000156893 #16 ENSGT00950000182907.a.a.u #17 ENSGT00530000063760.b #18 ENSGT00550000075028 #19 ENSGT00940000159172 #20 ENSGT00940000160276 #21 ENSGT00870000136537 #22 ENSGT00950000182940.b.a.b #23 ENSGT00510000048165 #24 ENSGT00940000153118.db.a.a.b.a.b #25 ENSGT00940000153118.db.a.a.b.a.a #26 ENSGT01100000263575.B.u #29 ENSGT01100000263506.a.e.a.a.a.a.a.r.b ##36 ENSGT01100000263506.a.e.a.a.a.b.b.b ##36 ENSGT01060000248528.b.kh.xb.a.b ##34 ENSGT01100000263514.A.e.a.b.a.b.a.b ENSGT00940000153092.a.a.c.a.a.g ENSGT01100000263506.a.e.a.a.a.b.a.a.b.a.b.b ##36 ENSGT01100000263506.a.e.a.a.a.b.a.a.b.a.a ##36 ENSGT00940000163525 ENSGT01060000248528.b.kh.xb.b.b #34 ENSGT01060000248528.b.jh.a.b ##34 Muroidea_A ANCESTRAL SPECIES 5 ENSGT00940000161136 ENSGT00390000006215 #7 ENSGT00940000161600 #8 ENSGT00950000183094.a #9 ENSGT00390000011497 #11 ENSGT00500000045038 #12 ENSGT00390000018360 #13 ENSGT00390000003103 #14 ENSGT00390000002049.c.a #15 ENSGT00940000156893 #16 ENSGT00950000182907.a.a.u #17 ENSGT00530000063760.b #18 ENSGT00550000075028 #19 ENSGT00940000159172 #20 ENSGT00940000160276 #21 ENSGT00870000136537 #22 ENSGT00950000182940.b.a.b #23 ENSGT00510000048165 #24 ENSGT00940000153118.db.a.a.b.a.b #25 ENSGT00940000153118.db.a.a.b.a.a #26 ENSGT01100000263506.a.e.a.a.a.b.b.b ##36 ENSGT01060000248528.b.kh.xb.a.b ##34 ENSGT00940000153092.a.a.c.a.a.f.b ENSGT01100000263559.A.f.e ##35 ENSGT01100000263506.a.e.b #36 ENSGT01050000244808.A.b.b.a #37 ENSGT00950000183112.b.b ENSGT00940000158522 ENSGT00940000165934 ENSGT00390000012355.B.b ENSGT00390000005869.a Cricetidae ANCESTRAL SPECIES 6 ENSGT00390000006215 #7 ENSGT00940000161600 #8 ENSGT00950000183094.a #9 ENSGT00390000011497 #11 ENSGT00500000045038.u #12 ENSGT00390000018360 #13 ENSGT00390000003103 #14 ENSGT00390000002049.c.a #15 ENSGT00940000156893 #16 ENSGT00950000182907.a.a.u #17 ENSGT00950000182907.a.a.t.b #17 ENSGT00530000063760.b #18 ENSGT00550000075028 #19 ENSGT00940000159172 #20 ENSGT00940000160276 #21 ENSGT00870000136537 #22 ENSGT00950000182940.b.a.b #23 ENSGT00510000048165 #24 ENSGT00940000153118.db.a.a.b.a.b #25 ENSGT00940000153118.db.a.a.b.a.a #26 ENSGT01100000263506.a.e.a.a.a.b.b.b ##36 ENSGT01100000263506.a.e.b #36 ENSGT01050000244808.A.b.b.a #37 ENSGT00950000183112.b.b ENSGT00940000158522 ENSGT00940000165934 ENSGT00390000012355.B.b ENSGT00390000005869.a ENSGT00730000111185 ENSGT00390000014273.b ENSGT00940000158423 Cricetinae ANCESTRAL SPECIES 12 ENSGT00940000161136 ENSGT00390000006215 #7 ENSGT00940000161600 #8 ENSGT00950000183094.a #9 ENSGT00390000011497 #11 ENSGT00500000045038.u #12 ENSGT00390000018360 #13 ENSGT00390000003103 #14 ENSGT00390000002049.c.a #15 ENSGT00940000156893 #16 ENSGT00950000182907.a.a.t.b #17 ENSGT00530000063760.b #18 ENSGT00550000075028 #19 ENSGT00940000159172 #20 ENSGT00940000160276 #21 ENSGT00870000136537 #22 ENSGT00950000182940.b.a.b #23 ENSGT00510000048165 #24 ENSGT00940000153118.db.a.a.b.a.b #25 ENSGT01100000263506.a.e.b #36 ENSGT00950000183112.b.b ENSGT00940000158522 ENSGT00940000165934 ENSGT00390000012355.B.b ENSGT00390000005869.a ENSGT00730000111185 ENSGT00390000014273.b ENSGT00940000158423 ENSGT00530000063074.a ENSGT01030000234539.a.a.b.a.a ENSGT00390000013847 Chinese hamster chok1gshd MODERN SPECIES 66 Ecm1 (ENSCGRG00001009335) #7 Tars2 (ENSCGRG00001023517) #8 Rprd2 (ENSCGRG00001021587) #9 Prpf3 (ENSCGRG00001019100) #11 ENSCGRG00001015258 #12 Ciart (ENSCGRG00001021140) #13 BC028528 (ENSCGRG00001011710) #14 Aph1a (ENSCGRG00001024346) #15 Car14 (ENSCGRG00001001363) #16 ENSCGRG00001022251 ENSCGRG00001017709 #17 Plekho1 (ENSCGRG00001011990) #18 Vps45 (ENSCGRG00001024791) #19 Otud7b (ENSCGRG00001023406) #20 Mtmr11 (ENSCGRG00001016961) #21 Sf3b4 (ENSCGRG00001003590) #22 Sv2a (ENSCGRG00001020508) #23 Bola1 (ENSCGRG00001011268) #24 H2ac21 (ENSCGRG00001011919) #25 ENSCGRG00001009965 #30 ENSCGRG00001011428 ##36 ENSCGRG00001010190 ##35 ENSCGRG00001010788 #30 ENSCGRG00001009035 #30 ENSCGRG00001009755 #35 ENSCGRG00001009153 ##34 ENSCGRG00001009937 ##35 H2bc18 (ENSCGRG00001006172) #36 ENSCGRG00001019293 Hjv (ENSCGRG00001009674) Txnip (ENSCGRG00001010170) Golden Hamster MODERN SPECIES 782 Adamtsl4 (ENSMAUG00000014851) Ecm1 (ENSMAUG00000016262) #7 Tars2 (ENSMAUG00000008184) #8 Rprd2 (ENSMAUG00000019875) #9 Prpf3 (ENSMAUG00000017112) #11 ENSMAUG00000014535 #12 ENSMAUG00000001664 BC028528 (ENSMAUG00000009366) #14 Aph1a (ENSMAUG00000009007) #15 Car14 (ENSMAUG00000019851) #16 Anp32e (ENSMAUG00000011419) #17 Plekho1 (ENSMAUG00000017313) #18 Vps45 (ENSMAUG00000020648) #19 Otud7b (ENSMAUG00000017029) #20 Mtmr11 (ENSMAUG00000017521) #21 Sf3b4 (ENSMAUG00000015266) #22 Sv2a (ENSMAUG00000019595) #23 Bola1 (ENSMAUG00000020828) #24 ENSMAUG00000005836 ##36 ENSMAUG00000005554 ##34 H2bc18 (ENSMAUG00000005217) #36 Hjv (ENSMAUG00000014664) Txnip (ENSMAUG00000012817) ENSMAUG00000011743 ENSMAUG00000007964 Ankrd34a (ENSMAUG00000016847) Lix1l (ENSMAUG00000018322) ENSMAUG00000016783 Pex11b (ENSMAUG00000013080) Itga10 (ENSMAUG00000005986) Ankrd35 (ENSMAUG00000016099) Cricetidae_B ANCESTRAL SPECIES 3 ENSGT00390000006215 #7 ENSGT00940000161600 #8 ENSGT00950000183094.a #9 ENSGT00390000011497 #11 ENSGT00500000045038.v.a.b #12 ENSGT00500000045038.u #12 ENSGT00390000018360 #13 ENSGT00390000003103 #14 ENSGT00390000002049.c.a #15 ENSGT00940000156893 #16 ENSGT00950000182907.a.a.u #17 ENSGT00530000063760.b #18 ENSGT00550000075028 #19 ENSGT00940000159172 #20 ENSGT00940000160276 #21 ENSGT00870000136537 #22 ENSGT00950000182940.b.a.b #23 ENSGT00510000048165 #24 ENSGT00940000153118.db.a.a.b.a.b #25 ENSGT00940000153118.db.a.a.b.a.a #26 ENSGT01100000263506.a.e.a.a.a.b.b.b ##36 ENSGT01100000263559.B #35 ENSGT00940000156302 #30 ENSGT01100000263506.a.e.b #36 ENSGT01050000244808.A.b.b.a #37 ENSGT00950000183112.b.b ENSGT00940000158522 ENSGT00940000165934 ENSGT00390000012355.B.b ENSGT00390000005869.a ENSGT00730000111185 Prairie vole DUPLICATION Prairie vole MODERN SPECIES 8 Adamtsl4 (ENSMOCG00000008356) Ecm1 (ENSMOCG00000019294) #7 Tars2 (ENSMOCG00000018432) #8 ENSMOCG00000013494 #9 Prpf3 (ENSMOCG00000000242) #11 ENSMOCG00000004675 #12 Ciart (ENSMOCG00000020599) #13 BC028528 (ENSMOCG00000003466) #14 Aph1a (ENSMOCG00000022720) #15 Car14 (ENSMOCG00000014152) #16 Anp32e (ENSMOCG00000002258) #17 Plekho1 (ENSMOCG00000016679) #18 Vps45 (ENSMOCG00000014888) #19 Otud7b (ENSMOCG00000005067) #20 Mtmr11 (ENSMOCG00000017943) #21 ENSMOCG00000013658 #22 Sv2a (ENSMOCG00000000375) #23 Bola1 (ENSMOCG00000016236) #24 H2ac21 (ENSMOCG00000008450) #25 ENSMOCG00000007571 ENSMOCG00000002051 ##36 ENSMOCG00000008702 #30 ENSMOCG00000008172 #35 ENSMOCG00000014664 ##35 H2bc18 (ENSMOCG00000007133) #36 Fcgr1 (ENSMOCG00000016687) #37 ENSMOCG00000000933 Kirrel (ENSMOCG00000022496) Fcrls (ENSMOCG00000011149) ##37 ENSMOCG00000022843 ENSMOCG00000007905 Prairie vole MODERN SPECIES 7 ENSMOCG00000001041 Rnf34 (ENSMOCG00000002778) Anapc5 (ENSMOCG00000023021) Camkk2 (ENSMOCG00000017708) P2rx4 (ENSMOCG00000019133) P2rx7 (ENSMOCG00000019925) ENSMOCG00000015217 Atp2a2 (ENSMOCG00000007488) Anapc7 (ENSMOCG00000002579) Arpc3 (ENSMOCG00000008984) Gpn3 (ENSMOCG00000019272) Fam216a (ENSMOCG00000010732) ENSMOCG00000017139 Rad9b (ENSMOCG00000008181) Pptc7 (ENSMOCG00000013509) ENSMOCG00000014155 #22 Tctn1 (ENSMOCG00000018752) Hvcn1 (ENSMOCG00000010612) Ppp1cc (ENSMOCG00000009688) Ccdc63 (ENSMOCG00000001073) Myl2 (ENSMOCG00000010135) Cux2 (ENSMOCG00000021745) Pheta1 (ENSMOCG00000004810) Sh2b3 (ENSMOCG00000013499) Atxn2 (ENSMOCG00000005219) Brap (ENSMOCG00000013461) ENSMOCG00000020267 Aldh2 (ENSMOCG00000019600) Mapkapk5 (ENSMOCG00000020026) Tmem116 (ENSMOCG00000002712) ENSMOCG00000007822 Northern American deer mouse MODERN SPECIES 19 Rprd2 (ENSPEMG00000013381) #9 ENSPEMG00000024405 Prpf3 (ENSPEMG00000011672) #11 ENSPEMG00000030510 ENSPEMG00000013980 #12 Ciart (ENSPEMG00000002076) #13 BC028528 (ENSPEMG00000009975) #14 Aph1a (ENSPEMG00000015896) #15 Car14 (ENSPEMG00000011085) #16 Anp32e (ENSPEMG00000000742) #17 Plekho1 (ENSPEMG00000015477) #18 Vps45 (ENSPEMG00000018774) #19 ENSPEMG00000030134 Otud7b (ENSPEMG00000027312) #20 Mtmr11 (ENSPEMG00000014402) #21 Sf3b4 (ENSPEMG00000017568) #22 Sv2a (ENSPEMG00000008887) #23 Bola1 (ENSPEMG00000008051) #24 H2ac21 (ENSPEMG00000025720) #25 H2ac20 (ENSPEMG00000008763) #26 H2bc21 (ENSPEMG00000026085) ##36 ENSPEMG00000026231 #35 ENSPEMG00000024811 #30 ENSPEMG00000030515 ##34 ENSPEMG00000030275 ##35 H2bc18 (ENSPEMG00000026346) #36 Fcgr1 (ENSPEMG00000010092) #37 ENSPEMG00000029146 Hjv (ENSPEMG00000016694) Txnip (ENSPEMG00000010784) Polr3gl (ENSPEMG00000014489) Murinae ANCESTRAL SPECIES 5 ENSGT00940000161136 ENSGT00390000006215 #7 ENSGT00940000161600 #8 ENSGT00950000183094.a #9 ENSGT00390000011497 #11 ENSGT00500000045038 #12 ENSGT00390000018360 #13 ENSGT00390000003103 #14 ENSGT00390000002049.c.a #15 ENSGT00940000156893 #16 ENSGT00950000182907.a.a.u #17 ENSGT00530000063760.b #18 ENSGT00550000075028 #19 ENSGT00940000159172 #20 ENSGT00940000160276 #21 ENSGT00870000136537 #22 ENSGT00950000182940.b.a.b #23 ENSGT00510000048165 #24 ENSGT00940000153118.db.a.a.b.a.b #25 ENSGT00940000153118.db.a.a.b.a.a #26 ENSGT01100000263506.a.e.a.a.a.b.b.b ##36 ENSGT01060000248528.b.kh.xb.a.b ##34 ENSGT01100000263559.A.f.d.a.a ##35 ENSGT00940000156302 #30 ENSGT01060000248528.b.kh.yb.a.b ##34 ENSGT01100000263559.A.f.e ##35 ENSGT01100000263559.B #35 ENSGT01100000263506.a.e.b #36 ENSGT01050000244808.A.b.b.a #37 ENSGT00950000183112.b.b ENSGT00940000158522 Mus ANCESTRAL SPECIES 7 ENSGT00940000161136 ENSGT00390000006215 #7 ENSGT00940000161600 #8 ENSGT00950000183094.a #9 ENSGT00390000011497 #11 ENSGT00500000045038 #12 ENSGT00390000018360 #13 ENSGT00390000003103 #14 ENSGT00390000002049.c.a #15 ENSGT00940000156893 #16 ENSGT00950000182907.a.a.u #17 ENSGT00530000063760.b #18 ENSGT00550000075028 #19 ENSGT00940000159172 #20 ENSGT00940000160276 #21 ENSGT00870000136537 #22 ENSGT00950000182940.b.a.b #23 ENSGT00510000048165 #24 ENSGT00940000153118.db.a.a.b.a.b #25 ENSGT00940000153118.db.a.a.b.a.a #26 ENSGT01100000263506.a.e.a.a.a.b.b.b ##36 ENSGT01060000248528.b.kh.xb.a.b ##34 ENSGT01100000263559.A.f.d.a.a ##35 ENSGT00940000156302 #30 ENSGT01060000248528.b.kh.yb.a.b ##34 ENSGT01100000263559.A.f.e ##35 ENSGT01100000263559.B #35 ENSGT01100000263506.a.e.b #36 ENSGT01050000244808.A.b.b.a #37 ENSGT00950000183112.b.b ENSGT00940000158522 Mus_A ANCESTRAL SPECIES 9 ENSGT00940000161136 ENSGT00390000006215 #7 ENSGT00940000161600 #8 ENSGT00950000183094.a #9 ENSGT00390000011497 #11 ENSGT00500000045038 #12 ENSGT00390000018360 #13 ENSGT00390000003103 #14 ENSGT00390000002049.c.a #15 ENSGT00940000156893 #16 ENSGT00950000182907.a.a.u #17 ENSGT00530000063760.b #18 ENSGT00550000075028 #19 ENSGT00940000159172 #20 ENSGT00940000160276 #21 ENSGT00870000136537 #22 ENSGT00950000182940.b.a.b #23 ENSGT00510000048165 #24 ENSGT00940000153118.db.a.a.b.a.b #25 ENSGT00940000153118.db.a.a.b.a.a #26 ENSGT00940000153092.a.a.d.f.a ENSGT01100000263506.a.e.a.a.a.b.b.b ##36 ENSGT01100000263559.A.f.d.a.a ##35 ENSGT00940000156302 #30 ENSGT01060000248528.b.kh.yb.a.b ##34 ENSGT01100000263559.A.f.e ##35 ENSGT01100000263506.a.e.b #36 ENSGT01050000244808.A.b.b.a #37 ENSGT00950000183112.b.b ENSGT00940000158522 ENSGT00860000135842 Mus_B ANCESTRAL SPECIES 8 ENSGT00940000161136 ENSGT00390000006215 #7 ENSGT00940000161600 #8 ENSGT00950000183094.a #9 ENSGT00390000011497 #11 ENSGT00500000045038 #12 ENSGT00390000018360 #13 ENSGT00390000003103.a.a #14 ENSGT00390000002049.c.a #15 ENSGT00940000156893 #16 ENSGT00950000182907.a.a.u #17 ENSGT00530000063760.b #18 ENSGT00550000075028 #19 ENSGT00940000159172 #20 ENSGT00940000160276 #21 ENSGT00870000136537 #22 ENSGT00950000182940.b.a.b #23 ENSGT00510000048165 #24 ENSGT00940000153118.db.a.a.b.a.b #25 ENSGT00940000153118.db.a.a.b.a.a #26 ENSGT01100000263506.a.e.a.a.a.b.b.b ##36 ENSGT01100000263514.A.e.a.a.b ENSGT01100000263506.a.e.b #36 ENSGT01050000244808.A.b.b.a #37 ENSGT00950000183112.b.b ENSGT00940000158522 ENSGT00860000135842 ENSGT00940000165934 ENSGT00390000012355.B.b ENSGT00390000005869.a ENSGT00730000111185.n.a Mouse MODERN SPECIES 12 Adamtsl4 (ENSMUSG00000015850) Ecm1 (ENSMUSG00000028108) #7 Tars2 (ENSMUSG00000028107) #8 Rprd2 (ENSMUSG00000028106) #9 Prpf3 (ENSMUSG00000015748) #11 Mrps21 (ENSMUSG00000054312) #12 Ciart (ENSMUSG00000038550) #13 BC028528 (ENSMUSG00000038543) #14 Aph1a (ENSMUSG00000015750) #15 Car14 (ENSMUSG00000038526) #16 Anp32e (ENSMUSG00000015749) #17 Plekho1 (ENSMUSG00000015745) #18 Vps45 (ENSMUSG00000015747) #19 Otud7b (ENSMUSG00000038495) #20 Mtmr11 (ENSMUSG00000045934) #21 Sf3b4 (ENSMUSG00000068856) #22 Sv2a (ENSMUSG00000038486) #23 Bola1 (ENSMUSG00000015943) #24 H2ac21 (ENSMUSG00000063689) #25 H2ac20 (ENSMUSG00000068855) #26 H2bc21 (ENSMUSG00000068854) ##36 H3c15 (ENSMUSG00000081058) ##35 H2ac19 (ENSMUSG00000063954) #30 H2ac18 (ENSMUSG00000064220) #30 H3c14 (ENSMUSG00000093769) ##35 H4c14 (ENSMUSG00000091405) ##34 H3c13 (ENSMUSG00000074403) ##35 H2bc18 (ENSMUSG00000105827) #36 Fcgr1 (ENSMUSG00000015947) #37 Hjv (ENSMUSG00000038403) Txnip (ENSMUSG00000038393) Mus_C ANCESTRAL SPECIES 6 ENSGT00940000161136 ENSGT00390000006215 #7 ENSGT00940000161600 #8 ENSGT00950000183094.a #9 ENSGT00390000011497 #11 ENSGT00500000045038.t #12 ENSGT00390000018360 #13 ENSGT00390000003103.a.a #14 ENSGT00390000002049.c.a #15 ENSGT00940000156893 #16 ENSGT00950000182907.a.a.u #17 ENSGT00530000063760.b #18 ENSGT00550000075028 #19 ENSGT00940000159172 #20 ENSGT00940000160276 #21 ENSGT00870000136537 #22 ENSGT00950000182940.b.a.b #23 ENSGT00510000048165 #24 ENSGT00940000153118.db.a.a.b.a.b #25 ENSGT00940000153118.db.a.a.b.a.a #26 ENSGT00940000153092.a.a.d.f.a ENSGT01100000263506.a.e.a.a.a.b.b.b ##36 ENSGT01100000263514.A.e.a.a.b ENSGT01100000263506.a.e.b #36 ENSGT01050000244808.A.b.b.a #37 ENSGT00950000183112.b.b ENSGT00940000158522 ENSGT00860000135842 ENSGT00940000165934 ENSGT00390000012355.B.b ENSGT00390000005869.a spretus MODERN SPECIES 12 Adamtsl4 (MGP_SPRETEiJ_G0026294) Ecm1 (MGP_SPRETEiJ_G0026295) #7 Tars2 (MGP_SPRETEiJ_G0026296) #8 Rprd2 (MGP_SPRETEiJ_G0026297) #9 Prpf3 (MGP_SPRETEiJ_G0026298) #11 Mrps21 (MGP_SPRETEiJ_G0026299) #12 Ciart (MGP_SPRETEiJ_G0026300) #13 BC028528 (MGP_SPRETEiJ_G0026301) #14 Aph1a (MGP_SPRETEiJ_G0026302) #15 Car14 (MGP_SPRETEiJ_G0026303) #16 Anp32e (MGP_SPRETEiJ_G0026304) #17 Plekho1 (MGP_SPRETEiJ_G0026305) #18 Vps45 (MGP_SPRETEiJ_G0026306) #19 Otud7b (MGP_SPRETEiJ_G0026307) #20 Mtmr11 (MGP_SPRETEiJ_G0026308) #21 Sf3b4 (MGP_SPRETEiJ_G0026309) #22 Sv2a (MGP_SPRETEiJ_G0026310) #23 Bola1 (MGP_SPRETEiJ_G0026311) #24 H2ac21 (MGP_SPRETEiJ_G0026312) #25 H2ac20 (MGP_SPRETEiJ_G0026313) #26 MGP_SPRETEiJ_G0026314 MGP_SPRETEiJ_G0026315 H2bc21 (MGP_SPRETEiJ_G0026316) ##36 MGP_SPRETEiJ_G0026318 #30 MGP_SPRETEiJ_G0026317 #30 MGP_SPRETEiJ_G0026319 ##34 MGP_SPRETEiJ_G0026320 H2bc18 (MGP_SPRETEiJ_G0026321) #36 MGP_SPRETEiJ_G0026322 MGP_SPRETEiJ_G0026323 Hjv (MGP_SPRETEiJ_G0026324) Steppe mouse MODERN SPECIES 3111 Adamtsl4 (ENSMSIG00000006628) Ecm1 (ENSMSIG00000006669) #7 Tars2 (ENSMSIG00000006741) #8 Rprd2 (ENSMSIG00000007289) #9 Prpf3 (ENSMSIG00000007342) #11 ENSMSIG00000007397 #12 ENSMSIG00000007429 #13 BC028528 (ENSMSIG00000007460) #14 ENSMSIG00000007562 #15 Car14 (ENSMSIG00000007599) #16 Anp32e (ENSMSIG00000007657) #17 ENSMSIG00000007830 #18 Vps45 (ENSMSIG00000007881) #19 Otud7b (ENSMSIG00000007920) #20 Mtmr11 (ENSMSIG00000007965) #21 Sf3b4 (ENSMSIG00000008017) #22 Sv2a (ENSMSIG00000008068) #23 Bola1 (ENSMSIG00000008109) #24 ENSMSIG00000008132 ##36 ENSMSIG00000008164 ##34 Ryukyu mouse MODERN SPECIES 12 Adamtsl4 (MGP_CAROLIEiJ_G0025350) Ecm1 (MGP_CAROLIEiJ_G0025351) #7 Tars2 (MGP_CAROLIEiJ_G0025352) #8 Rprd2 (MGP_CAROLIEiJ_G0025353) #9 Prpf3 (MGP_CAROLIEiJ_G0025354) #11 Mrps21 (MGP_CAROLIEiJ_G0025355) #12 MGP_CAROLIEiJ_G0025356 #13 BC028528 (MGP_CAROLIEiJ_G0025357) #14 Aph1a (MGP_CAROLIEiJ_G0025358) #15 Car14 (MGP_CAROLIEiJ_G0025359) #16 Anp32e (MGP_CAROLIEiJ_G0025360) #17 Plekho1 (MGP_CAROLIEiJ_G0025361) #18 Vps45 (MGP_CAROLIEiJ_G0025362) #19 Otud7b (MGP_CAROLIEiJ_G0025363) #20 Mtmr11 (MGP_CAROLIEiJ_G0025364) #21 Sf3b4 (MGP_CAROLIEiJ_G0025365) #22 Sv2a (MGP_CAROLIEiJ_G0025366) #23 Bola1 (MGP_CAROLIEiJ_G0025367) #24 H2ac21 (MGP_CAROLIEiJ_G0025368) #25 H2ac20 (MGP_CAROLIEiJ_G0025369) #26 MGP_CAROLIEiJ_G0025370 H2bc21 (MGP_CAROLIEiJ_G0025371) ##36 MGP_CAROLIEiJ_G0025372 #30 MGP_CAROLIEiJ_G0025373 ##34 MGP_CAROLIEiJ_G0025374 ##35 H2bc18 (MGP_CAROLIEiJ_G0025375) #36 Fcgr1 (MGP_CAROLIEiJ_G0025376) #37 Hjv (MGP_CAROLIEiJ_G0025377) Txnip (MGP_CAROLIEiJ_G0025378) MGP_CAROLIEiJ_G0025379 Polr3gl (MGP_CAROLIEiJ_G0025380) Shrew mouse MODERN SPECIES 17 Adamtsl4 (MGP_PahariEiJ_G0026794) Ecm1 (MGP_PahariEiJ_G0026795) #7 Tars2 (MGP_PahariEiJ_G0026796) #8 Rprd2 (MGP_PahariEiJ_G0026797) #9 Prpf3 (MGP_PahariEiJ_G0026798) #11 Mrps21 (MGP_PahariEiJ_G0026799) #12 Ciart (MGP_PahariEiJ_G0026800) #13 BC028528 (MGP_PahariEiJ_G0026801) #14 Aph1a (MGP_PahariEiJ_G0026802) #15 Car14 (MGP_PahariEiJ_G0026803) #16 MGP_PahariEiJ_G0026804 #17 Plekho1 (MGP_PahariEiJ_G0026805) #18 Vps45 (MGP_PahariEiJ_G0026806) #19 Otud7b (MGP_PahariEiJ_G0026807) #20 Mtmr11 (MGP_PahariEiJ_G0026808) #21 Sf3b4 (MGP_PahariEiJ_G0026809) #22 Sv2a (MGP_PahariEiJ_G0026810) #23 Bola1 (MGP_PahariEiJ_G0026811) #24 H2ac21 (MGP_PahariEiJ_G0026812) #25 H2ac20 (MGP_PahariEiJ_G0026813) #26 MGP_PahariEiJ_G0026815 MGP_PahariEiJ_G0026814 H2bc21 (MGP_PahariEiJ_G0026816) ##36 MGP_PahariEiJ_G0026817 ##34 MGP_PahariEiJ_G0026818 ##35 MGP_PahariEiJ_G0026819 #35 H2bc18 (MGP_PahariEiJ_G0026820) #36 Fcgr1 (MGP_PahariEiJ_G0026821) #37 Hjv (MGP_PahariEiJ_G0026822) Txnip (MGP_PahariEiJ_G0026823) MGP_PahariEiJ_G0026824 Rat MODERN SPECIES 11 Ecm1 (ENSRNOG00000021166) #7 Tars2 (ENSRNOG00000057194) #8 Rprd2 (ENSRNOG00000054294) #9 Prpf3 (ENSRNOG00000025629) #11 Mrps21 (ENSRNOG00000024845) #12 Ciart (ENSRNOG00000042717) #13 C2H1orf54 (ENSRNOG00000059750) #14 Aph1a (ENSRNOG00000023816) #15 Car14 (ENSRNOG00000023162) #16 Anp32e (ENSRNOG00000021168) #17 RGD1562196 (ENSRNOG00000065202) Plekho1 (ENSRNOG00000021170) #18 Vps45 (ENSRNOG00000021173) #19 Otud7b (ENSRNOG00000042068) #20 Mtmr11 (ENSRNOG00000021176) #21 Sf3b4 (ENSRNOG00000021181) #22 Sv2a (ENSRNOG00000021182) #23 Bola1 (ENSRNOG00000021185) #24 ENSRNOG00000062927 #30 LOC102549173 (ENSRNOG00000068046) ##35 LOC102549173 (ENSRNOG00000065886) #35 Hist1h4b (ENSRNOG00000032224) ##34 Hist2h3c2 (ENSRNOG00000063016) ##35 H2bc18 (ENSRNOG00000070591) #36 Fcgr1a (ENSRNOG00000021199) #37 ENSRNOG00000069676 AABR07012587.1 (ENSRNOG00000002223) AABR07012588.1 (ENSRNOG00000059842) Hjv (ENSRNOG00000021200) AABR07012592.1 (ENSRNOG00000037223) Txnip (ENSRNOG00000021201) Upper Galilee mountains blind mole rat MODERN SPECIES 1243 ENSNGAG00000024279 #8 Rprd2 (ENSNGAG00000024252) #9 Prpf3 (ENSNGAG00000000910) #11 Mrps21 (ENSNGAG00000001847) #12 ENSNGAG00000009739 BC028528 (ENSNGAG00000011340) #14 Aph1a (ENSNGAG00000019336) #15 Car14 (ENSNGAG00000013264) #16 ENSNGAG00000023116 Anp32e (ENSNGAG00000010494) #17 Plekho1 (ENSNGAG00000002001) #18 ENSNGAG00000005098 Vps45 (ENSNGAG00000001159) #19 Otud7b (ENSNGAG00000019612) #20 Mtmr11 (ENSNGAG00000015085) #21 Sf3b4 (ENSNGAG00000016337) #22 Sv2a (ENSNGAG00000024242) #23 Bola1 (ENSNGAG00000024327) #24 H2ac21 (ENSNGAG00000011111) #25 H2ac20 (ENSNGAG00000011075) #26 ENSNGAG00000023599 #29 ENSNGAG00000011353 ##36 ENSNGAG00000012728 #30 ENSNGAG00000004233 ##35 ENSNGAG00000020540 ##35 ENSNGAG00000012113 #35 Fcgr1 (ENSNGAG00000016194) #37 Lesser Egyptian jerboa MODERN SPECIES 69 Lhfpl1 (ENSJJAG00000015318) ENSJJAG00000012278 ENSJJAG00000018212 ENSJJAG00000017574 ENSJJAG00000020933 Htr2c (ENSJJAG00000024036) ENSJJAG00000023972 ENSJJAG00000011564 Il13ra2 (ENSJJAG00000022912) Lrch2 (ENSJJAG00000009205) Pls3 (ENSJJAG00000022405) Agtr2 (ENSJJAG00000011582) Vps45 (ENSJJAG00000019652) #19 Otud7b (ENSJJAG00000023034) #20 Mtmr11 (ENSJJAG00000013193) #21 Sf3b4 (ENSJJAG00000022500) #22 Sv2a (ENSJJAG00000019928) #23 Bola1 (ENSJJAG00000018323) #24 ENSJJAG00000014139 ENSJJAG00000020529 ##36 Hjv (ENSJJAG00000012429) Txnip (ENSJJAG00000013701) ENSJJAG00000019638 Ankrd34a (ENSJJAG00000011251) Lix1l (ENSJJAG00000017071) ENSJJAG00000009488 Pex11b (ENSJJAG00000003343) Itga10 (ENSJJAG00000023352) Ankrd35 (ENSJJAG00000001517) Pias3 (ENSJJAG00000020778) Nudt17 (ENSJJAG00000018335) Kangaroo rat MODERN SPECIES 345 Mcl1 (ENSDORG00000011424) Adamtsl4 (ENSDORG00000000397) Ecm1 (ENSDORG00000007570) #7 Tars2 (ENSDORG00000007569) #8 Rprd2 (ENSDORG00000023813) #9 Prpf3 (ENSDORG00000008664) #11 Mrps21 (ENSDORG00000030111) #12 ENSDORG00000025269 BC028528 (ENSDORG00000011695) #14 Aph1a (ENSDORG00000011694) #15 ENSDORG00000011690 #17 Plekho1 (ENSDORG00000005015) #18 Vps45 (ENSDORG00000005012) #19 Otud7b (ENSDORG00000005008) #20 Mtmr11 (ENSDORG00000016368) #21 Sf3b4 (ENSDORG00000016366) #22 Sv2a (ENSDORG00000016365) #23 Bola1 (ENSDORG00000016364) #24 H2ac21 (ENSDORG00000024245) #25 H2ac20 (ENSDORG00000024205) #26 ENSDORG00000028335 ##35 ENSDORG00000028881 #30 ENSDORG00000025650 ENSDORG00000028205 ##34 ENSDORG00000029688 #29 H2bc18 (ENSDORG00000028945) #36 Fcgr1 (ENSDORG00000016350) #37 ENSDORG00000004350 ENSDORG00000024805 ENSDORG00000024350 Trp53bp2 (ENSDORG00000013922) Lagomorpha ANCESTRAL SPECIES 1 ENSGT00940000161136 ENSGT00390000006215 #7 ENSGT00940000161600 #8 ENSGT00950000183094.a #9 ENSGT00390000011497 #11 ENSGT00500000045038 #12 ENSGT00390000018360 #13 ENSGT00390000003103 #14 ENSGT00390000002049.c.a #15 ENSGT00940000156893 #16 ENSGT00950000182907.a.a #17 ENSGT00530000063760.b #18 ENSGT00550000075028 #19 ENSGT00940000159172 #20 ENSGT00940000160276 #21 ENSGT00870000136537 #22 ENSGT00950000182940.b.a.b #23 ENSGT00510000048165 #24 ENSGT00940000153118.db.a.a.b.a.b #25 ENSGT00940000153118.db.a.a.b.a.a #26 ENSGT01100000263575.B.u #29 ENSGT01100000263559.B #35 ENSGT00940000156302 #30 ENSGT01100000263559.A.f.e ##35 ENSGT01100000263506.a.e.b #36 ENSGT01050000244808.A.b.b.a #37 ENSGT00950000183190.a.b.a.b ENSGT00420000029746.f ENSGT00950000183112.b.b ENSGT00940000158522 ENSGT01060000248645 Pika MODERN SPECIES 4549 PLEKHO1 (ENSOPRG00000010923) #18 VPS45 (ENSOPRG00000010903) #19 OTUD7B (ENSOPRG00000010849) #20 MTMR11 (ENSOPRG00000010825) #21 SF3B4 (ENSOPRG00000010808) #22 SV2A (ENSOPRG00000010799) #23 BOLA1 (ENSOPRG00000010793) #24 H2AC21 (ENSOPRG00000010790) #25 H2AC20 (ENSOPRG00000010787) #26 H2BC21 (ENSOPRG00000010785) #29 H3C15 (ENSOPRG00000010778) #35 ENSOPRG00000010773 #30 ENSOPRG00000010770 #30 ENSOPRG00000010762 ##35 Rabbit MODERN SPECIES 4 ADAMTSL4 (ENSOCUG00000000927) ECM1 (ENSOCUG00000011786) #7 TARS2 (ENSOCUG00000031561) #8 RPRD2 (ENSOCUG00000011770) #9 PRPF3 (ENSOCUG00000011760) #11 ENSOCUG00000027120 #12 CIART (ENSOCUG00000009044) #13 C1orf54 (ENSOCUG00000027251) #14 APH1A (ENSOCUG00000009037) #15 CA14 (ENSOCUG00000009032) #16 ENSOCUG00000022805 #17 PLEKHO1 (ENSOCUG00000006316) #18 ENSOCUG00000014360 #19 OTUD7B (ENSOCUG00000013924) #20 MTMR11 (ENSOCUG00000004616) #21 SF3B4 (ENSOCUG00000004614) #22 SV2A (ENSOCUG00000003894) #23 BOLA1 (ENSOCUG00000004609) #24 ENSOCUG00000037254 H2BC21 (ENSOCUG00000023535) #29 ENSOCUG00000023564 ENSOCUG00000025918 #30 ENSOCUG00000027315 ##35 ENSOCUG00000031190 ENSOCUG00000023811 ##35 H2BC18 (ENSOCUG00000024543) #36 ENSOCUG00000003403 #37 ENSOCUG00000038567 #37 ENSOCUG00000022427 ENSOCUG00000021718 ENSOCUG00000023196 Atlantogenata ANCESTRAL SPECIES 66 ENSGT00940000161136 ENSGT00390000006215 #7 ENSGT00940000161600 #8 ENSGT00950000183094.a #9 ENSGT00390000011497 #11 ENSGT00500000045038 #12 ENSGT00390000018360 #13 ENSGT00390000003103 #14 ENSGT00390000002049.c.a #15 ENSGT00940000156893 #16 ENSGT00950000182907.a.a #17 ENSGT00530000063760.b #18 ENSGT00550000075028 #19 ENSGT00940000159172 #20 ENSGT00940000160276 #21 ENSGT00870000136537 #22 ENSGT00950000182940.b.a.b #23 ENSGT00510000048165 #24 ENSGT00940000153118.db.a.a.b.a.b #25 ENSGT01100000263575.B #29 ENSGT00940000156302 #30 ENSGT01100000263559.B #35 Afrotheria ANCESTRAL SPECIES 76 ENSGT00940000161136 ENSGT00390000006215 #7 ENSGT00940000161600 #8 ENSGT00950000183094.a #9 ENSGT00390000011497 #11 ENSGT00500000045038 #12 ENSGT00390000018360 #13 ENSGT00390000003103 #14 ENSGT00390000002049.c.a #15 ENSGT00940000156893 #16 ENSGT00950000182907.a.a #17 ENSGT00530000063760.b #18 ENSGT00550000075028 #19 ENSGT00940000159172 #20 ENSGT00940000160276 #21 ENSGT00870000136537 #22 ENSGT00950000182940.b.a.b #23 ENSGT00510000048165 #24 ENSGT00940000153118.db.a.a.b.a.b #25 Afrotheria_a ANCESTRAL SPECIES 75 ENSGT00940000161136 ENSGT00390000006215 #7 ENSGT00940000161600 #8 ENSGT00950000183094.a #9 ENSGT00390000011497 #11 ENSGT00500000045038 #12 ENSGT00390000018360 #13 ENSGT00390000003103 #14 ENSGT00390000002049.c.a #15 ENSGT00940000156893 #16 ENSGT00950000182907.a.a #17 ENSGT00530000063760.b #18 ENSGT00550000075028 #19 ENSGT00940000159172 #20 ENSGT00940000160276 #21 ENSGT00870000136537 #22 ENSGT00950000182940.b.a.b #23 ENSGT00510000048165 #24 ENSGT00940000153118.db.a.a.b.a.b #25 Elephant MODERN SPECIES 26 ADAMTSL4 (ENSLAFG00000030426) ECM1 (ENSLAFG00000028827) #7 TARS2 (ENSLAFG00000004979) #8 RPRD2 (ENSLAFG00000004975) #9 PRPF3 (ENSLAFG00000004713) #11 MRPS21 (ENSLAFG00000030348) #12 CIART (ENSLAFG00000002729) #13 C1orf54 (ENSLAFG00000022852) #14 APH1A (ENSLAFG00000004705) #15 CA14 (ENSLAFG00000004703) #16 ANP32E (ENSLAFG00000026778) #17 PLEKHO1 (ENSLAFG00000018415) #18 VPS45 (ENSLAFG00000018411) #19 OTUD7B (ENSLAFG00000026624) #20 MTMR11 (ENSLAFG00000008533) #21 SF3B4 (ENSLAFG00000008531) #22 SV2A (ENSLAFG00000008529) #23 BOLA1 (ENSLAFG00000008527) #24 H2AC21 (ENSLAFG00000001481) #25 ENSLAFG00000031642 H2BC21 (ENSLAFG00000007572) #29 ENSLAFG00000029983 #35 ENSLAFG00000027548 #30 ENSLAFG00000021961 #29 ENSLAFG00000029422 #30 ENSLAFG00000025802 #35 ENSLAFG00000026296 ENSLAFG00000029272 #37 H2BC18 (ENSLAFG00000031442) #36 ENSLAFG00000018352 #37 ENSLAFG00000029191 Hyrax MODERN SPECIES 3213 OTUD7B (ENSPCAG00000000507) #20 ENSPCAG00000000431 #21 SF3B4 (ENSPCAG00000000392) #22 Tenrec MODERN SPECIES 7022 OTUD7B (ENSETEG00000008970) #20 MTMR11 (ENSETEG00000008966) #21 SF3B4 (ENSETEG00000008963) #22 Xenarthra ANCESTRAL SPECIES 107 ENSGT00940000161136 ENSGT00390000006215 #7 ENSGT00940000161600 #8 ENSGT00950000183094.a #9 ENSGT00390000011497 #11 ENSGT00500000045038 #12 ENSGT00390000018360 #13 ENSGT00390000003103 #14 ENSGT00390000002049.c.a #15 ENSGT00940000156893 #16 ENSGT00950000182907.a.a #17 ENSGT00530000063760.b #18 ENSGT00550000075028 #19 ENSGT00940000159172 #20 ENSGT00940000160276 #21 ENSGT00870000136537 #22 ENSGT00950000182940.b.a.b #23 ENSGT00510000048165 #24 ENSGT00940000153118.db.a.a.b.a.b #25 Armadillo DUPLICATION Armadillo MODERN SPECIES 1834 ADAMTSL4 (ENSDNOG00000043483) ECM1 (ENSDNOG00000044394) #7 TARS2 (ENSDNOG00000005934) #8 RPRD2 (ENSDNOG00000005924) #9 PRPF3 (ENSDNOG00000005904) #11 MRPS21 (ENSDNOG00000025657) #12 CIART (ENSDNOG00000041401) #13 ENSDNOG00000030893 #14 APH1A (ENSDNOG00000007194) #15 CA14 (ENSDNOG00000007176) #16 ANP32E (ENSDNOG00000034773) #17 PLEKHO1 (ENSDNOG00000041988) #18 VPS45 (ENSDNOG00000013685) #19 OTUD7B (ENSDNOG00000039147) #20 MTMR11 (ENSDNOG00000002431) #21 ENSDNOG00000048908 #22 SV2A (ENSDNOG00000030740) #23 BOLA1 (ENSDNOG00000000839) #24 H2AC21 (ENSDNOG00000037547) #25 ENSDNOG00000043400 #29 ENSDNOG00000037369 #30 ENSDNOG00000043843 #31 ENSDNOG00000040113 ENSDNOG00000036815 #29 ENSDNOG00000031169 #30 H3C14 (ENSDNOG00000040427) #35 H2BC18 (ENSDNOG00000041447) #36 ENSDNOG00000037158 FCGR1A (ENSDNOG00000035779) #37 ENSDNOG00000039714 ENSDNOG00000040102 Armadillo MODERN SPECIES 2250 RPS6KA6 (ENSDNOG00000016255) SLC39A8 (ENSDNOG00000047899) BANK1 (ENSDNOG00000008629) ENSDNOG00000037231 #22 PPP3CA (ENSDNOG00000030654) Marsupialia ANCESTRAL SPECIES 2 ENSGT01090000260003.a.b.b.a.a.a.b.b ENSGT00940000161136 ENSGT00390000006215 #7 ENSGT00940000161600 #8 ENSGT00950000183094.a #9 ENSGT00390000011497 #11 ENSGT00500000045038 #12 ENSGT00390000018360 #13 ENSGT00390000002049.c.a #15 ENSGT00940000156893 #16 ENSGT00950000182907.a.a #17 ENSGT00530000063760.b #18 ENSGT00550000075028 #19 ENSGT00940000159172 #20 ENSGT00940000160276 #21 ENSGT00870000136537 #22 ENSGT00950000182940.b.a.b #23 ENSGT00510000048165 #24 ENSGT00940000153118.db.a.a.b.a.b #25 ENSGT00950000183112.b.b ENSGT00940000158522 ENSGT01060000248645 ENSGT00390000012355.B.b ENSGT00390000005869.a ENSGT00730000111185 ENSGT01050000244841.A.a.b ENSGT00390000014273.b ENSGT00940000158423 ENSGT00530000063074.a ENSGT01030000234539.a.a.b.a.a ENSGT00390000013847 Marsupialia_b ANCESTRAL SPECIES 1 ENSGT01090000260003.a.b.b.a.a.a.b.b ENSGT00940000161136 ENSGT00390000006215 #7 ENSGT00940000161600 #8 ENSGT00950000183094.a #9 ENSGT00390000011497 #11 ENSGT00500000045038 #12 ENSGT00390000018360 #13 ENSGT00390000002049.c.a #15 ENSGT00940000156893 #16 ENSGT00950000182907.a.a #17 ENSGT00530000063760.b #18 ENSGT00550000075028 #19 ENSGT00940000159172 #20 ENSGT00940000160276 #21 ENSGT00870000136537 #22 ENSGT00950000182940.b.a.b #23 ENSGT00510000048165 #24 ENSGT00940000153118.db.a.a.b.a.b #25 ENSGT00950000183112.b.b ENSGT00940000158522 ENSGT01060000248645 ENSGT00390000012355.B.b ENSGT00390000005869.a ENSGT00730000111185 ENSGT01050000244841.A.a.b ENSGT00390000014273.b ENSGT00940000158423 ENSGT00530000063074.a ENSGT01030000234539.a.a.b.a.a ENSGT00390000013847 Diprotodontia ANCESTRAL SPECIES 5 ENSGT01090000260003.a.b.b.a.a.a.b.b ENSGT00940000161136 ENSGT00390000006215 #7 ENSGT00940000161600 #8 ENSGT00950000183094.a #9 ENSGT00390000011497 #11 ENSGT00500000045038 #12 ENSGT00390000018360 #13 ENSGT00390000002049.c.a #15 ENSGT00940000156893 #16 ENSGT00950000182907.a.a #17 ENSGT00530000063760.b #18 ENSGT00550000075028 #19 ENSGT00940000159172 #20 ENSGT00940000160276 #21 ENSGT00870000136537 #22 ENSGT00950000182940.b.a.b #23 ENSGT00510000048165 #24 ENSGT00950000183112.b.b ENSGT00940000158522 ENSGT01060000248645 ENSGT00390000012355.B.b ENSGT00390000005869.a ENSGT00730000111185 ENSGT01050000244841.A.a.b ENSGT00390000014273.b ENSGT00940000158423 ENSGT00530000063074.a ENSGT01030000234539.a.a.b.a.a ENSGT00390000013847 ENSGT00390000002799 Diprotodontia_a ANCESTRAL SPECIES 6 ENSGT01090000260003.a.b.b.a.a.a.b.b ENSGT00940000161136 ENSGT00390000006215 #7 ENSGT00940000161600 #8 ENSGT00950000183094.a #9 ENSGT00390000011497 #11 ENSGT00500000045038.gb #12 ENSGT00390000018360 #13 ENSGT00390000002049.c.a #15 ENSGT00940000156893 #16 ENSGT00950000182907.a.a #17 ENSGT00530000063760.b #18 ENSGT00550000075028 #19 ENSGT00940000159172 #20 ENSGT00940000160276 #21 ENSGT00870000136537 #22 ENSGT00950000182940.b.a.b #23 ENSGT00510000048165 #24 ENSGT01100000263506.a.f ##36 ENSGT00940000153118.db.a.a.b.a.b #25 ENSGT00940000153125.F ENSGT01100000263575.B.f #29 ENSGT01100000263559.A.f ##35 ENSGT00940000153092.a.a.b ENSGT01100000263575.B.e.b #29 ENSGT00950000183112.b.b ENSGT00940000158522 ENSGT01060000248645 ENSGT00390000012355.B.b ENSGT00390000005869.a ENSGT00730000111185 Common wonbat DUPLICATION Common wonbat MODERN SPECIES 1007 ENSVURG00010015036 ENSVURG00010015042 ENSVURG00010015082 #7 ENSVURG00010015119 #8 ENSVURG00010015284 #9 ENSVURG00010015568 #11 ENSVURG00010015584 #12 ENSVURG00010015603 #13 ENSVURG00010015618 #15 ENSVURG00010015635 #16 ENSVURG00010015651 #17 ENSVURG00010015660 #18 ENSVURG00010015671 #19 ENSVURG00010015716 #20 ENSVURG00010015733 #21 ENSVURG00010015753 #22 ENSVURG00010015766 #23 ENSVURG00010015790 #24 ENSVURG00010015803 ##36 ENSVURG00010015862 ENSVURG00010015866 ENSVURG00010015872 #29 ENSVURG00010015875 ENSVURG00010015885 #35 ENSVURG00010015891 ENSVURG00010015897 #29 ENSVURG00010015903 #29 ENSVURG00010015906 ENSVURG00010015916 #35 ENSVURG00010015924 ENSVURG00010015933 #34 Common wonbat MODERN SPECIES 1007 ENSVURG00010000461 ENSVURG00010000490 ENSVURG00010000529 #7 ENSVURG00010000553 #8 ENSVURG00010000591 #9 ENSVURG00010000618 #11 ENSVURG00010000650 #12 ENSVURG00010000676 #13 ENSVURG00010000715 #15 ENSVURG00010000731 #16 ANP32E (ENSVURG00010000762) #17 ENSVURG00010000839 #18 ENSVURG00010000870 #19 ENSVURG00010000895 #20 ENSVURG00010000922 #21 ENSVURG00010000937 #22 ENSVURG00010000953 #23 ENSVURG00010000996 #24 ENSVURG00010001021 ##36 ENSVURG00010001047 #25 ENSVURG00010001073 ENSVURG00010001132 #29 ENSVURG00010001164 ENSVURG00010001172 ##35 ENSVURG00010001177 ENSVURG00010001199 #29 ENSVURG00010001206 #31 ENSVURG00010001221 #30 ENSVURG00010001308 #35 ENSVURG00010001317 ENSVURG00010001341 #34 koala MODERN SPECIES 4 MCL1 (ENSPCIG00000008897) ADAMTSL4 (ENSPCIG00000008894) ENSPCIG00000008887 #7 TARS2 (ENSPCIG00000008884) #8 RPRD2 (ENSPCIG00000008798) #9 PRPF3 (ENSPCIG00000008795) #11 ENSPCIG00000008793 #12 CIART (ENSPCIG00000035308) #13 APH1A (ENSPCIG00000008786) #15 CA14 (ENSPCIG00000008783) #16 ENSPCIG00000033433 #17 PLEKHO1 (ENSPCIG00000030649) #18 VPS45 (ENSPCIG00000008774) #19 OTUD7B (ENSPCIG00000008768) #20 MTMR11 (ENSPCIG00000008766) #21 SF3B4 (ENSPCIG00000008765) #22 SV2A (ENSPCIG00000008764) #23 BOLA1 (ENSPCIG00000008763) #24 ENSPCIG00000031608 ##36 H2AC21 (ENSPCIG00000036441) #25 ENSPCIG00000008760 ENSPCIG00000037267 #29 ENSPCIG00000036846 ##35 ENSPCIG00000036686 ENSPCIG00000019912 #29 H1-5 (ENSPCIG00000034869) ENSPCIG00000034324 #30 ENSPCIG00000034490 #34 ENSPCIG00000031998 #34 ENSPCIG00000032472 #34 ENSPCIG00000034427 ##34 Wallaby MODERN SPECIES 6389 OTUD7B (ENSMEUG00000003293) #20 MTMR11 (ENSMEUG00000003280) #21 SF3B4 (ENSMEUG00000003272) #22 SV2A (ENSMEUG00000003265) #23 Opossum MODERN SPECIES 1 ADAMTSL4 (ENSMODG00000018799) MCL1 (ENSMODG00000018801) ENSMODG00000018796 #7 TARS2 (ENSMODG00000018792) #8 RPRD2 (ENSMODG00000018786) #9 PRPF3 (ENSMODG00000018774) #11 MRPS21 (ENSMODG00000018783) #12 ENSMODG00000018781 #13 APH1A (ENSMODG00000018778) #15 CA14 (ENSMODG00000018776) #16 ENSMODG00000027412 #17 ENSMODG00000018772 #18 VPS45 (ENSMODG00000018771) #19 OTUD7B (ENSMODG00000018770) #20 MTMR11 (ENSMODG00000018769) #21 SF3B4 (ENSMODG00000018767) #22 SV2A (ENSMODG00000018766) #23 ENSMODG00000044619 ENSMODG00000049030 #29 ENSMODG00000050604 ENSMODG00000043839 #35 ENSMODG00000036508 #29 HIST1H4I (ENSMODG00000044293) #34 HIST1H4I (ENSMODG00000046729) #34 HIST1H4I (ENSMODG00000045825) #34 HIST1H4I (ENSMODG00000043804) #34 HIST1H4I (ENSMODG00000037943) #34 ENSMODG00000038666 HJV (ENSMODG00000018756) TXNIP (ENSMODG00000018755) ENSMODG00000018754 Platypus MODERN SPECIES 88 ADAMTSL4 (ENSOANG00000042473) ENSOANG00000041783 ENSA (ENSOANG00000045744) ENSOANG00000042673 ENSOANG00000039301 #8 ENSOANG00000049931 #9 PRPF3 (ENSOANG00000036562) #11 MRPS21 (ENSOANG00000050148) #12 ENSOANG00000038721 APH1A (ENSOANG00000043325) #15 ENSOANG00000039352 #16 ENSOANG00000045338 #17 PLEKHO1 (ENSOANG00000041629) #18 ENSOANG00000003375 #19 MTMR11 (ENSOANG00000040114) #21 ENSOANG00000037391 #22 HJV (ENSOANG00000040602) TXNIP (ENSOANG00000041306) ENSOANG00000040128 ENSOANG00000043050 ENSOANG00000043928 PEX11B (ENSOANG00000040317) ITGA10 (ENSOANG00000046912) ANKRD35 (ENSOANG00000021904) PIAS3 (ENSOANG00000040422) ENSOANG00000038849 RNF115 (ENSOANG00000036987) ENSOANG00000047977 ENSOANG00000034161 ENSOANG00000049515 ENSOANG00000039089 Sauria ANCESTRAL SPECIES 28 ENSGT01090000260003.a.b.b.a.a.a.b.b ENSGT00940000161136 ENSGT00390000006215 #7 ENSGT00940000159348.e ENSGT00950000183094.a #9 ENSGT00390000011497 #11 ENSGT00500000045038 #12 ENSGT00390000018360 #13 ENSGT00940000156893 #16 ENSGT00390000002049.c.a #15 ENSGT00950000182907.a.a #17 ENSGT00530000063760.b #18 ENSGT00550000075028 #19 ENSGT00940000159172 #20 ENSGT00940000160276 #21 ENSGT00870000136537 #22 ENSGT00950000182940.b.a.b #23 ENSGT00510000048165 #24 ENSGT00940000165753 ENSGT00940000161215 ENSGT00950000186203 ENSGT00950000183112.b.b ENSGT00940000158522 ENSGT01060000248645 ENSGT00390000012355.B.b ENSGT01050000244841.A.a.b ENSGT00730000111185 ENSGT00390000005869.a ENSGT00390000014273.b ENSGT00950000185785 ENSGT00940000164158.A Archelosauria ANCESTRAL SPECIES 27 ENSGT00940000161136 ENSGT00390000006215 #7 ENSGT00940000159348.e ENSGT00950000183094.a #9 ENSGT00390000011497 #11 ENSGT00500000045038 #12 ENSGT00390000018360 #13 ENSGT00940000156893 #16 ENSGT00390000002049.c.a #15 ENSGT01000000215168 ENSGT00950000182907.a.a #17 ENSGT00530000063760.b #18 ENSGT00550000075028 #19 ENSGT00940000159172 #20 ENSGT00940000160276 #21 ENSGT00870000136537 #22 ENSGT00950000182940.b.a.b #23 ENSGT00510000048165 #24 ENSGT00940000165753 ENSGT00940000161215.hc.a ENSGT00950000186203 ENSGT00950000183112.b.b ENSGT00940000158522 ENSGT01100000263845 ENSGT00390000012355.B.b ENSGT01050000244841.A.a.b ENSGT00730000111185 ENSGT00390000005869.a ENSGT00390000014273.b ENSGT00950000185785 ENSGT00940000164158.A Archosauria ANCESTRAL SPECIES 36 ENSGT00940000155413 ENSGT01090000260003.a.b.b.a.a.a.b.b ENSGT00390000006215 #7 ENSGT00940000159348.e ENSGT00950000183094.a #9 ENSGT00390000011497 #11 ENSGT00940000166610 ENSGT00940000156893 #16 ENSGT00390000002049.c.a #15 ENSGT01000000215168 ENSGT00950000182907.a.a #17 ENSGT00530000063760.b #18 ENSGT00550000075028 #19 ENSGT00940000159172 #20 ENSGT00940000160276 #21 ENSGT00870000136537 #22 ENSGT00950000182940.b.a.b #23 ENSGT00510000048165 #24 ENSGT00940000165753 ENSGT00950000183112.b.b ENSGT00940000158522 ENSGT01100000263845 ENSGT00390000012355.B.b ENSGT01050000244841.A.a.b ENSGT00730000111185 ENSGT00390000005869.a ENSGT00390000014273.b ENSGT00940000164422 ENSGT00940000158423 ENSGT00940000157203 ENSGT00390000002799 Australian saltwater crocodile MODERN SPECIES 15 ANP32E (ENSCPRG00005009121) #17 PLEKHO1 (ENSCPRG00005009120) #18 VPS45 (ENSCPRG00005009111) #19 OTUD7B (ENSCPRG00005009099) #20 MTMR11 (ENSCPRG00005009090) #21 SF3B4 (ENSCPRG00005009082) #22 SV2A (ENSCPRG00005008968) #23 BOLA1 (ENSCPRG00005008944) #24 ENSCPRG00005008941 ENSCPRG00005008916 HJV (ENSCPRG00005008913) TXNIP (ENSCPRG00005008906) ENSCPRG00005008900 ANKRD34A (ENSCPRG00005008897) ENSCPRG00005008895 RBM8A (ENSCPRG00005008893) ENSCPRG00005008878 KIRREL1 (ENSCPRG00005008858) ENSCPRG00005008850 ENSCPRG00005008847 ENSCPRG00005008845 Aves ANCESTRAL SPECIES 36 ENSGT00940000155413 ENSGT01090000260003.a.b.b.a.a.a.b.b ENSGT00390000006215 #7 ENSGT00940000159348.e ENSGT00950000183094.a #9 ENSGT00390000011497 #11 ENSGT00940000166610 ENSGT00940000156893 #16 ENSGT00390000002049.c.a #15 ENSGT01000000215168 ENSGT00950000182907.a.a #17 ENSGT00530000063760.b #18 ENSGT00550000075028 #19 ENSGT00940000159172 #20 ENSGT00940000160276 #21 ENSGT00870000136537 #22 ENSGT00950000182940.b.a.b #23 ENSGT00510000048165 #24 ENSGT00940000165753 ENSGT00950000183112.b.b ENSGT00940000158522 ENSGT01100000263845 ENSGT00390000012355.B.b ENSGT01050000244841.A.a.b ENSGT00730000111185 ENSGT00390000005869.a ENSGT00390000014273.b ENSGT00940000164422 ENSGT00940000158423 ENSGT00940000157203 ENSGT00390000002799 African ostrich MODERN SPECIES 95 ENSSCUG00000000242 SF3B4 (ENSSCUG00000000241) #22 HJV (ENSSCUG00000000239) TXNIP (ENSSCUG00000000238) Neognathae ANCESTRAL SPECIES 28 ENSGT01090000260003.a.b.b.a.a.a.b.b ENSGT00390000006215 #7 ENSGT00940000159348.e ENSGT00950000183094.a #9 ENSGT00390000011497 #11 ENSGT00940000166610 ENSGT00940000164936 ENSGT00940000156893 #16 ENSGT00390000002049.c.a #15 ENSGT01000000215168 ENSGT00950000182907.a.a #17 ENSGT00530000063760.b #18 ENSGT00550000075028 #19 ENSGT00940000159172 #20 ENSGT00940000160276 #21 ENSGT00870000136537 #22 ENSGT00950000182940.b.a.b #23 ENSGT00510000048165 #24 ENSGT00940000165753 ENSGT00950000183112.b.b ENSGT00940000158522 ENSGT01100000263845 ENSGT00390000012355.B.b ENSGT01050000244841.A.a.b ENSGT00730000111185 ENSGT00390000005869.a ENSGT00390000014273.b ENSGT00940000164422 ENSGT00940000158423 ENSGT00940000157203 ENSGT00390000002799 Galloanserae ANCESTRAL SPECIES 49 ENSGT00950000182907.a.a #17 ENSGT00530000063760.b #18 ENSGT00550000075028 #19 ENSGT00940000159172 #20 ENSGT00940000160276 #21 ENSGT00870000136537 #22 ENSGT00950000182940.b.a.b #23 ENSGT00510000048165 #24 ENSGT00940000165753 ENSGT00950000183112.b.b ENSGT00940000158522 ENSGT01100000264033 ENSGT00390000012355.B.b ENSGT00730000111185 ENSGT00390000005869.a ENSGT00390000014273.b ENSGT00940000164422 ENSGT00940000158423 ENSGT00940000157203 ENSGT00390000002799 ENSGT01030000234539.a.a.b.a.a Anatidae ANCESTRAL SPECIES 135 ENSGT00950000182907.a.a #17 ENSGT00530000063760.b #18 ENSGT00550000075028 #19 ENSGT00940000159172 #20 ENSGT00940000160276 #21 ENSGT00870000136537 #22 Pink-footed goose MODERN SPECIES 464 ANP32E (ENSABRG00000008502) #17 PLEKHO1 (ENSABRG00000008525) #18 VPS45 (ENSABRG00000008537) #19 OTUD7B (ENSABRG00000008581) #20 ENSABRG00000008603 #21 SF3B4 (ENSABRG00000008616) #22 Duck MODERN SPECIES 2658 SF3B4 (ENSAPLG00000022064) #22 Phasianidae ANCESTRAL SPECIES 30 ENSGT00960000189418 ENSGT00940000155399 ENSGT00940000161509 ENSGT00940000157244 ENSGT00940000161732 ENSGT00940000165149 ENSGT00940000158230 ENSGT00390000006100 ENSGT00940000155620 ENSGT00390000008765 ENSGT00390000007227.a ENSGT00730000111346 ENSGT00950000183076.a.b.b.a.b ENSGT00940000159172 #20 ENSGT00940000160276 #21 ENSGT00870000136537 #22 ENSGT00950000182940.b.a.b #23 ENSGT00510000048165 #24 ENSGT00940000165753 ENSGT00950000183112.b.b ENSGT00940000158522 ENSGT01100000264033 ENSGT00390000012355.B.b ENSGT00730000111185 ENSGT00390000005869.a ENSGT00390000014273.b ENSGT00390000002799 ENSGT01030000234539.a.a.b.a.a ENSGT00940000159463 ENSGT00950000182844.b.b.a ENSGT00940000161384 Japanese quail MODERN SPECIES 17 PEX19 (ENSCJPG00005013931) ENSCJPG00005013932 PEA15 (ENSCJPG00005013933) CASQ1 (ENSCJPG00005013934) ENSCJPG00005013966 F11R (ENSCJPG00005013969) USF1 (ENSCJPG00005013970) ENSCJPG00005013971 NECTIN4 (ENSCJPG00005013972) ENSCJPG00005013975 ENSCJPG00005013976 RNF115 (ENSCJPG00005013977) ENSCJPG00005013978 OTUD7B (ENSCJPG00005013980) #20 MTMR11 (ENSCJPG00005013981) #21 SF3B4 (ENSCJPG00005013982) #22 SV2A (ENSCJPG00005013983) #23 BOLA1 (ENSCJPG00005013984) #24 ENSCJPG00005013985 HJV (ENSCJPG00005013986) TXNIP (ENSCJPG00005013987) MEF2D (ENSCJPG00005013988) ENSCJPG00005013990 HAPLN2 (ENSCJPG00005013991) BCAN (ENSCJPG00005013992) ENSCJPG00005013993 ENSCJPG00005013994 CRABP2 (ENSCJPG00005013995) ENSCJPG00005013996 ISG20L2 (ENSCJPG00005013997) METTL25B (ENSCJPG00005013998) Phasianidae_b ANCESTRAL SPECIES 38 ENSGT00550000075028 #19 ENSGT00530000063760.b #18 ENSGT00950000182907.a.a #17 ENSGT00940000157244 ENSGT00940000161732 ENSGT00940000165149 ENSGT00940000158230 ENSGT00390000006100 ENSGT00940000155620 ENSGT00390000008765 ENSGT00390000007227.a ENSGT00730000111346 ENSGT00950000183076.a.b.b.a.b ENSGT00940000159172 #20 ENSGT00940000160276 #21 ENSGT00870000136537 #22 ENSGT00950000182940.b.a.b #23 ENSGT00510000048165 #24 ENSGT00940000165753 ENSGT00950000183112.b.b ENSGT01100000264033 ENSGT00390000012355.B.b ENSGT00730000111185 ENSGT00390000005869.a ENSGT00390000014273.b ENSGT00390000002799 ENSGT01030000234539.a.a.b.a.a ENSGT00940000159463 ENSGT00950000182844.b.b.a ENSGT00940000161384 ENSGT00940000157343 Chicken MODERN SPECIES 17 MEX3A (ENSGALG00010028070) ENSGALG00010028072 RAB25 (ENSGALG00010028075) LAMTOR2 (ENSGALG00010028078) UBQLN4 (ENSGALG00010028081) ENSGALG00010028085 NAXE (ENSGALG00010028088) ENSGALG00010028094 TTC24 (ENSGALG00010028097) IQGAP3 (ENSGALG00010028108) ARHGEF2 (ENSGALG00010027310) ENSGALG00010027354 ENSGALG00010027297 OTUD7B (ENSGALG00010028750) #20 MTMR11 (ENSGALG00010028752) #21 SF3B4 (ENSGALG00010028887) #22 SV2A (ENSGALG00010028753) #23 BOLA1 (ENSGALG00010027977) #24 ENSGALG00010028698 HJV (ENSGALG00010027586) ENSGALG00010027593 ENSGALG00010028727 ENSGALG00010028732 RBM8A (ENSGALG00010027889) LIX1L (ENSGALG00010027895) PEX11B (ENSGALG00010027423) ENSGALG00010028742 PIAS3 (ENSGALG00010028748) MEF2D (ENSGALG00010028314) RHBG (ENSGALG00010028321) HAPLN2 (ENSGALG00010028329) Turkey MODERN SPECIES 19 ENSMGAG00000000653 #22 ENSMGAG00000000663 #20 ANP32E (ENSMGAG00000000646) #17 ENSMGAG00000000647 #18 VPS45 (ENSMGAG00000000648) #19 ENSMGAG00000022801 ETV3L (ENSMGAG00000016365) ARHGEF11 (ENSMGAG00000014176) LRRC71 (ENSMGAG00000021562) PEAR1 (ENSMGAG00000014173) NTRK1 (ENSMGAG00000014171) ENSMGAG00000014166 ENSMGAG00000014165 PRCC (ENSMGAG00000014163) ENSMGAG00000018485 HDGF (ENSMGAG00000021314) Neognathae_b ANCESTRAL SPECIES 34 ENSGT00390000006215 #7 ENSGT00940000159348.e ENSGT00950000183094.a #9 ENSGT00390000011497 #11 ENSGT00940000166610 ENSGT00940000164936 ENSGT00940000156893 #16 ENSGT00390000002049.c.a #15 ENSGT01000000215168 ENSGT00950000182907.a.a #17 ENSGT00530000063760.b #18 ENSGT00550000075028 #19 ENSGT00940000159172 #20 ENSGT00940000160276 #21 ENSGT00870000136537 #22 ENSGT00950000182940.b.a.b #23 ENSGT00510000048165 #24 ENSGT00940000165753 ENSGT00950000183112.b.b ENSGT00950000186203 ENSGT00940000158522 ENSGT01100000263845 ENSGT00390000012355.B.b ENSGT01050000244841.A.a.b ENSGT00730000111185 ENSGT00390000005869.a ENSGT00390000014273.b ENSGT00940000164422 ENSGT00940000158423 ENSGT00940000157203 Passeriformes ANCESTRAL SPECIES 36 ENSGT00940000157585 ENSGT00940000157759 ENSGT00390000006215 #7 ENSGT00940000159348.e ENSGT00950000183094.a #9 ENSGT00390000011497 #11 ENSGT00940000166610 ENSGT00940000164936 ENSGT00940000156893 #16 ENSGT00390000002049.c.a #15 ENSGT00950000182907.a.a #17 ENSGT00530000063760.b #18 ENSGT00550000075028 #19 ENSGT00940000159172 #20 ENSGT00940000160276 #21 ENSGT00870000136537 #22 ENSGT00950000182940.b.a.b #23 ENSGT00510000048165 #24 ENSGT00950000183112.b.b ENSGT00950000186203 ENSGT00940000158522 ENSGT01100000263845 ENSGT00390000012355.B.b ENSGT00730000111185 ENSGT00390000005869.a ENSGT00390000014273.b ENSGT00940000157203.f ENSGT00390000002799 Great tit MODERN SPECIES 18 ENSPMJG00000002931 ARNT (ENSPMJG00000002875) CTSK (ENSPMJG00000001799) ECM1 (ENSPMJG00000001797) #7 ENSPMJG00000001784 RPRD2 (ENSPMJG00000001737) #9 PRPF3 (ENSPMJG00000001723) #11 ENSPMJG00000001710 ENSPMJG00000001707 ENSPMJG00000001699 #16 ANP32E (ENSPMJG00000001694) #17 PLEKHO1 (ENSPMJG00000001683) #18 VPS45 (ENSPMJG00000001675) #19 OTUD7B (ENSPMJG00000001674) #20 MTMR11 (ENSPMJG00000001664) #21 SF3B4 (ENSPMJG00000001660) #22 SV2A (ENSPMJG00000001656) #23 BOLA1 (ENSPMJG00000001655) #24 HJV (ENSPMJG00000001653) ENSPMJG00000001651 TXNIP (ENSPMJG00000001647) ENSPMJG00000001640 ANKRD34A (ENSPMJG00000001636) RBM8A (ENSPMJG00000001631) LIX1L (ENSPMJG00000001628) PEX11B (ENSPMJG00000001624) RNF115 (ENSPMJG00000001554) POLR3C (ENSPMJG00000001543) ENSPMJG00000001526 ENSPMJG00000001522 ENSPMJG00000001517 Passeriformes_d ANCESTRAL SPECIES 26 ENSGT01040000240780 ENSGT00940000157585 ENSGT00940000157759 ENSGT00390000006215 #7 ENSGT00940000159348.e ENSGT00950000183094.a #9 ENSGT00390000011497 #11 ENSGT00940000166610 ENSGT00940000156893 #16 ENSGT00390000002049.c.a #15 ENSGT00950000182907.a.a #17 ENSGT00530000063760.b #18 ENSGT00550000075028 #19 ENSGT00940000159172 #20 ENSGT00940000160276 #21 ENSGT00870000136537 #22 ENSGT00950000182940.b.a.b #23 ENSGT00510000048165 #24 ENSGT00950000183112.b.b ENSGT00950000186203 ENSGT00940000158522 ENSGT01100000263845 ENSGT00730000111185 ENSGT00390000005869.a ENSGT00390000014273.b ENSGT00940000157203.f ENSGT00390000002799 ENSGT00950000183212.C ENSGT00940000154716.f.a ENSGT00940000154716.f.b ENSGT00390000008281 Passeriformes_g ANCESTRAL SPECIES 27 ENSGT01040000240780 ENSGT00940000157585 ENSGT00940000157759 ENSGT00390000006215 #7 ENSGT00940000159348.e ENSGT00950000183094.a #9 ENSGT00390000011497 #11 ENSGT00940000166610 ENSGT00940000156893 #16 ENSGT00390000002049.c.a #15 ENSGT00950000182907.a.a #17 ENSGT00530000063760.b #18 ENSGT00550000075028 #19 ENSGT00940000159172 #20 ENSGT00940000160276 #21 ENSGT00870000136537 #22 ENSGT00950000182940.b.a.b #23 ENSGT00510000048165 #24 ENSGT00950000183112.b.b ENSGT00950000186203 ENSGT00940000158522 ENSGT01100000263845 ENSGT00730000111185 ENSGT00390000005869.a ENSGT00390000014273.b ENSGT00940000157203.f ENSGT00390000002799 ENSGT00950000183212.C ENSGT00940000154716.f.a ENSGT00940000154716.f.b ENSGT00390000008281 Passeroidea ANCESTRAL SPECIES 28 ENSGT01040000240780 ENSGT00940000157585 ENSGT00940000157759 ENSGT00390000006215 #7 ENSGT00940000159348.e ENSGT00950000183094.a #9 ENSGT00390000011497 #11 ENSGT00940000166610 ENSGT00940000156893 #16 ENSGT00390000002049.c.a #15 ENSGT00950000182907.a.a #17 ENSGT00530000063760.b #18 ENSGT00550000075028 #19 ENSGT00940000159172 #20 ENSGT00940000160276 #21 ENSGT00870000136537 #22 ENSGT00950000182940.b.a.b #23 ENSGT00510000048165 #24 ENSGT00950000183112.b.b ENSGT00950000186203 ENSGT00940000158522 ENSGT01100000263845 ENSGT00730000111185 ENSGT00390000005869.a ENSGT00390000014273.b ENSGT00940000157203.f ENSGT00390000002799 ENSGT00950000183212.C ENSGT00940000154716.f.a ENSGT00940000154716.f.b ENSGT00390000008281 Common canary MODERN SPECIES 81 CERS2 (ENSSCAG00000012013) SETDB1 (ENSSCAG00000012005) ARNT (ENSSCAG00000011985) CTSK (ENSSCAG00000011979) ENSSCAG00000011971 #9 PRPF3 (ENSSCAG00000011963) #11 ENSSCAG00000011951 ENSSCAG00000011949 APH1A (ENSSCAG00000011945) #15 CA14 (ENSSCAG00000011941) #16 ANP32E (ENSSCAG00000011934) #17 PLEKHO1 (ENSSCAG00000011918) #18 VPS45 (ENSSCAG00000011835) #19 OTUD7B (ENSSCAG00000011804) #20 ENSSCAG00000011796 #21 SF3B4 (ENSSCAG00000011792) #22 ENSSCAG00000011787 HJV (ENSSCAG00000011784) TXNIP (ENSSCAG00000011781) SNX27 (ENSSCAG00000011769) ENSSCAG00000011758 VANGL2 (ENSSCAG00000011752) NCSTN (ENSSCAG00000011736) COPA (ENSSCAG00000011178) ENSSCAG00000011096 S100A11 (ENSSCAG00000011093) ENSSCAG00000011090 ENSSCAG00000011087 ENSSCAG00000011081 ENSSCAG00000011080 ENSSCAG00000011073 Zebra finch MODERN SPECIES 18 ENSTGUG00000023543 ARNT (ENSTGUG00000004647) CTSK (ENSTGUG00000027582) ECM1 (ENSTGUG00000021608) #7 ENSTGUG00000004602 RPRD2 (ENSTGUG00000004590) #9 PRPF3 (ENSTGUG00000004552) #11 ENSTGUG00000028735 CA14 (ENSTGUG00000020197) #16 APH1A (ENSTGUG00000020297) #15 ANP32E (ENSTGUG00000004542) #17 PLEKHO1 (ENSTGUG00000019427) #18 VPS45 (ENSTGUG00000004493) #19 OTUD7B (ENSTGUG00000004479) #20 MTMR11 (ENSTGUG00000004470) #21 SF3B4 (ENSTGUG00000019975) #22 SV2A (ENSTGUG00000025334) #23 BOLA1 (ENSTGUG00000022266) #24 HJV (ENSTGUG00000013701) ENSTGUG00000021938 ENSTGUG00000020632 RBM8A (ENSTGUG00000004447) LIX1L (ENSTGUG00000004434) PEX11B (ENSTGUG00000004433) TXNIP (ENSTGUG00000019978) RNF115 (ENSTGUG00000019792) POLR3C (ENSTGUG00000016941) ENSTGUG00000027190 NDUFS2 (ENSTGUG00000022898) B4GALT3 (ENSTGUG00000023975) ENSTGUG00000024371 Neognathae_c ANCESTRAL SPECIES 36 ENSGT00940000159348.e ENSGT00950000183094.a #9 ENSGT00390000011497 #11 ENSGT00940000166610 ENSGT00940000164936 ENSGT00940000156893 #16 ENSGT00390000002049.c.a #15 ENSGT01000000215168 ENSGT00950000182907.a.a #17 ENSGT00530000063760.b #18 ENSGT00550000075028 #19 ENSGT00940000159172 #20 ENSGT00940000160276 #21 ENSGT00870000136537 #22 ENSGT00950000182940.b.a.b #23 ENSGT00510000048165 #24 ENSGT00940000165753 ENSGT00950000183112.b.b ENSGT00950000186203 ENSGT00940000158522 ENSGT01100000263845 ENSGT00390000012355.B.b ENSGT00530000063712.a.a.h ENSGT01050000244841.A.a.b ENSGT00730000111185 ENSGT00390000005869.a ENSGT00390000014273.b ENSGT00940000164422 ENSGT00940000158423 Golden eagle MODERN SPECIES 25 ECM1 (ENSACCG00020003013) #7 ENSACCG00020002960 RPRD2 (ENSACCG00020002913) #9 PRPF3 (ENSACCG00020002880) #11 ENSACCG00020002862 ENSACCG00020002847 CA14 (ENSACCG00020002807) #16 APH1A (ENSACCG00020002773) #15 ENSACCG00020002755 ENSACCG00020002744 ANP32E (ENSACCG00020002729) #17 PLEKHO1 (ENSACCG00020002713) #18 VPS45 (ENSACCG00020002675) #19 OTUD7B (ENSACCG00020002629) #20 MTMR11 (ENSACCG00020002599) #21 SF3B4 (ENSACCG00020002561) #22 SV2A (ENSACCG00020002500) #23 BOLA1 (ENSACCG00020002457) #24 ENSACCG00020002439 HJV (ENSACCG00020002431) TXNIP (ENSACCG00020002414) ENSACCG00020002397 ANKRD34A (ENSACCG00020002378) ENSACCG00020002351 RBM8A (ENSACCG00020002326) LIX1L (ENSACCG00020002309) PEX11B (ENSACCG00020002287) ENSACCG00020002265 ITGA10 (ENSACCG00020002214) RNF115 (ENSACCG00020002154) POLR3C (ENSACCG00020002120) Kakapo MODERN SPECIES 60 CTSK (ENSSHBG00005006020) CTSS (ENSSHBG00005006037) ENSSHBG00005006069 ENSSHBG00005006090 KIRREL1 (ENSSHBG00005006115) ENSSHBG00005006169 ETV3 (ENSSHBG00005006200) ETV3L (ENSSHBG00005006226) ARHGEF11 (ENSSHBG00005006414) ENSSHBG00005006579 ANP32E (ENSSHBG00005006621) #17 PLEKHO1 (ENSSHBG00005006648) #18 VPS45 (ENSSHBG00005006666) #19 ENSSHBG00005006733 OTUD7B (ENSSHBG00005006838) #20 SF3B4 (ENSSHBG00005006878) #22 SV2A (ENSSHBG00005006900) #23 BOLA1 (ENSSHBG00005006925) #24 ENSSHBG00005006946 HJV (ENSSHBG00005006970) ENSSHBG00005006983 TXNIP (ENSSHBG00005007007) ENSSHBG00005007023 ANKRD34A (ENSSHBG00005007039) RBM8A (ENSSHBG00005007053) LIX1L (ENSSHBG00005007076) ARHGEF2 (ENSSHBG00005007107) Cryptodira ANCESTRAL SPECIES 20 ENSGT00940000161136 ENSGT00390000006215 #7 ENSGT00940000154969.a ENSGT00950000183094.a #9 ENSGT00390000011497 #11 ENSGT00500000045038 #12 ENSGT00390000018360 #13 ENSGT00940000156893 #16 ENSGT00390000002049.c.a #15 ENSGT01000000215168.a.b.b ENSGT00950000182907.a.a #17 ENSGT00530000063760.b #18 ENSGT00550000075028 #19 ENSGT00940000159172 #20 ENSGT00940000160276 #21 ENSGT00870000136537 #22 ENSGT00950000182940.b.a.b #23 ENSGT00510000048165 #24 ENSGT00940000165753 ENSGT00390000012412 ENSGT00940000154813 ENSGT00950000183112.b.b ENSGT00940000158522 ENSGT00940000165934 ENSGT00390000012355.B.b ENSGT00530000063712.a.a ENSGT01050000244841.A.a.b ENSGT00730000111185 ENSGT00390000005869.a ENSGT00390000014273.b ENSGT00950000185785 Testudinoidea ANCESTRAL SPECIES 17 ENSGT00390000006215 #7 ENSGT00940000154969.a ENSGT00950000183094.a #9 ENSGT00390000011497 #11 ENSGT00500000045038 #12 ENSGT00390000018360 #13 ENSGT00940000156893 #16 ENSGT00390000002049.c.a #15 ENSGT01010000223749.c ENSGT01000000215168.a.a.a.b ENSGT00950000182907.a.a #17 ENSGT00530000063760.b #18 ENSGT00550000075028 #19 ENSGT00940000159172 #20 ENSGT00940000160276 #21 ENSGT00870000136537 #22 ENSGT00950000182940.b.a.b #23 ENSGT00510000048165 #24 ENSGT00940000165753 ENSGT00940000161215.hc.a ENSGT00950000183112.b.b ENSGT00940000158522 ENSGT00940000165934 ENSGT00390000012355.B.b ENSGT01050000244841.A.a.b ENSGT00730000111185 ENSGT00390000005869.a ENSGT00390000014273.b ENSGT00950000185785 ENSGT00940000164158.A ENSGT00940000164422 Emydidae ANCESTRAL SPECIES 18 ENSGT00390000006215 #7 ENSGT00940000154969.a ENSGT00950000183094.a #9 ENSGT00390000011497 #11 ENSGT00500000045038 #12 ENSGT00390000018360 #13 ENSGT00940000156893 #16 ENSGT00390000002049.c.a #15 ENSGT01010000223749.c ENSGT01000000215168.a.a.a.b ENSGT00950000182907.a.a #17 ENSGT00530000063760.b #18 ENSGT00550000075028 #19 ENSGT00940000159172 #20 ENSGT00940000160276 #21 ENSGT00870000136537 #22 ENSGT00950000182940.b.a.b #23 ENSGT00510000048165 #24 ENSGT00940000165753 ENSGT00940000161215.hc.a ENSGT00950000183112.b.b ENSGT00940000158522 ENSGT00940000165934 ENSGT00390000012355.B.b ENSGT01050000244841.A.a.b ENSGT00730000111185 ENSGT00390000005869.a ENSGT00390000014273.b ENSGT00950000185785 ENSGT00940000164158.A ENSGT00940000164422 painted turtle MODERN SPECIES 738 PRPF3 (ENSCPBG00000008216) #11 MRPS21 (ENSCPBG00000008212) #12 CIART (ENSCPBG00000008205) #13 CA14 (ENSCPBG00000008191) #16 APH1A (ENSCPBG00000008178) #15 ENSCPBG00000008160 ENSCPBG00000008145 ENSCPBG00000008141 ENSCPBG00000008136 ENSCPBG00000008128 ANP32E (ENSCPBG00000008122) #17 PLEKHO1 (ENSCPBG00000008118) #18 VPS45 (ENSCPBG00000008102) #19 OTUD7B (ENSCPBG00000008074) #20 MTMR11 (ENSCPBG00000008053) #21 SF3B4 (ENSCPBG00000008041) #22 SV2A (ENSCPBG00000008024) #23 BOLA1 (ENSCPBG00000008019) #24 ENSCPBG00000008009 ENSCPBG00000007997 HJV (ENSCPBG00000007987) ENSCPBG00000007978 TXNIP (ENSCPBG00000007972) ENSCPBG00000007959 ANKRD34A (ENSCPBG00000007952) ENSCPBG00000007948 RBM8A (ENSCPBG00000007941) LIX1L (ENSCPBG00000007937) PEX11B (ENSCPBG00000007934) ENSCPBG00000007924 ENSCPBG00000007920 Three-toed box turtle MODERN SPECIES 102 ECM1 (ENSTMTG00000007038) #7 ENSTMTG00000003936 RPRD2 (ENSTMTG00000003690) #9 PRPF3 (ENSTMTG00000003651) #11 MRPS21 (ENSTMTG00000003635) #12 CIART (ENSTMTG00000003619) #13 ENSTMTG00000003596 #16 APH1A (ENSTMTG00000003583) #15 ENSTMTG00000003565 ENSTMTG00000003550 ANP32E (ENSTMTG00000003525) #17 PLEKHO1 (ENSTMTG00000003484) #18 VPS45 (ENSTMTG00000003440) #19 OTUD7B (ENSTMTG00000003400) #20 MTMR11 (ENSTMTG00000003371) #21 SF3B4 (ENSTMTG00000003355) #22 SV2A (ENSTMTG00000003281) #23 BOLA1 (ENSTMTG00000003267) #24 ENSTMTG00000003234 ENSTMTG00000003216 HJV (ENSTMTG00000003210) TXNIP (ENSTMTG00000003202) ENSTMTG00000003193 ANKRD34A (ENSTMTG00000003181) ENSTMTG00000003085 RBM8A (ENSTMTG00000003055) LIX1L (ENSTMTG00000021264) PEX11B (ENSTMTG00000021263) ENSTMTG00000021259 ENSTMTG00000021255 ITGA10 (ENSTMTG00000021222) Testudinidae ANCESTRAL SPECIES 3 ENSGT00940000154969.a ENSGT00950000183094.a #9 ENSGT00390000011497 #11 ENSGT00500000045038 #12 ENSGT00390000018360 #13 ENSGT00940000156893 #16 ENSGT00390000002049.c.a #15 ENSGT01010000223749.c ENSGT01000000215168.a.a.a.a ENSGT01000000215168.a.b.b ENSGT00950000182907.a.a #17 ENSGT00530000063760.b #18 ENSGT00550000075028 #19 ENSGT00940000159172 #20 ENSGT00940000160276 #21 ENSGT00870000136537 #22 ENSGT00950000182940.b.a.b #23 ENSGT00510000048165 #24 ENSGT00940000165753 ENSGT00950000183112.b.b ENSGT00940000158522 ENSGT00940000165934 ENSGT00390000012355.B.b ENSGT01050000244841.A.a.b ENSGT00730000111185 ENSGT00390000005869.a ENSGT00390000014273.b ENSGT00940000164158.A ENSGT00940000164422 ENSGT00940000158423 ENSGT00940000157203 Abingdon island giant tortoise MODERN SPECIES 1671 ENSCABG00000018479 ENSCABG00000018478 ENSCABG00000018477 ENSCABG00000018475 ENSCABG00000018474 ANP32E (ENSCABG00000018473) #17 PLEKHO1 (ENSCABG00000018472) #18 VPS45 (ENSCABG00000018470) #19 OTUD7B (ENSCABG00000018370) #20 MTMR11 (ENSCABG00000018355) #21 SF3B4 (ENSCABG00000018354) #22 SV2A (ENSCABG00000018335) #23 BOLA1 (ENSCABG00000018334) #24 ENSCABG00000018333 ENSCABG00000018329 HJV (ENSCABG00000018327) TXNIP (ENSCABG00000018325) ENSCABG00000018323 ANKRD34A (ENSCABG00000018322) ENSCABG00000018313 RBM8A (ENSCABG00000018312) LIX1L (ENSCABG00000018310) PEX11B (ENSCABG00000018308) ENSCABG00000018306 ITGA10 (ENSCABG00000018305) RNF115 (ENSCABG00000018303) Goode s thornscrub tortoise MODERN SPECIES 16 MRPS21 (ENSGEVG00005014452) #12 CIART (ENSGEVG00005014432) #13 CA14 (ENSGEVG00005013955) #16 APH1A (ENSGEVG00005013875) #15 ENSGEVG00005013824 ENSGEVG00005013772 ENSGEVG00005013716 ENSGEVG00005013683 ENSGEVG00005013639 ENSGEVG00005013610 ANP32E (ENSGEVG00005013581) #17 PLEKHO1 (ENSGEVG00005013486) #18 VPS45 (ENSGEVG00005013432) #19 OTUD7B (ENSGEVG00005013347) #20 MTMR11 (ENSGEVG00005013232) #21 SF3B4 (ENSGEVG00005013192) #22 ENSGEVG00005013115 #23 ENSGEVG00005013087 #23 BOLA1 (ENSGEVG00005013064) #24 ENSGEVG00005012931 ENSGEVG00005012816 HJV (ENSGEVG00005012744) TXNIP (ENSGEVG00005012717) ENSGEVG00005012685 ANKRD34A (ENSGEVG00005012643) ENSGEVG00005012351 RBM8A (ENSGEVG00005012278) LIX1L (ENSGEVG00005012253) PEX11B (ENSGEVG00005012234) ENSGEVG00005012211 ENSGEVG00005012138 Chinese turtle MODERN SPECIES 2004 ENSPSIG00000006622 ANP32E (ENSPSIG00000006633) #17 PLEKHO1 (ENSPSIG00000007572) #18 VPS45 (ENSPSIG00000007804) #19 OTUD7B (ENSPSIG00000008867) #20 MTMR11 (ENSPSIG00000009497) #21 SF3B4 (ENSPSIG00000009565) #22 SV2A (ENSPSIG00000009662) #23 ENSPSIG00000009818 ENSPSIG00000010036 HJV (ENSPSIG00000010052) TXNIP (ENSPSIG00000010332) ENSPSIG00000010726 ANKRD34A (ENSPSIG00000010887) ENSPSIG00000011039 LIX1L (ENSPSIG00000011046) PEX11B (ENSPSIG00000011074) Lepidosauria ANCESTRAL SPECIES 36 ENSGT00550000074892 ENSGT00940000161136 ENSGT00390000006215 #7 ENSGT00940000159348.e ENSGT00950000183094.a #9 ENSGT00390000011497 #11 ENSGT00500000045038 #12 ENSGT00390000018360 #13 ENSGT00940000156893 #16 ENSGT00390000002049.c.a #15 ENSGT00950000182907.a.a #17 ENSGT00530000063760.b #18 ENSGT00550000075028 #19 ENSGT00940000159172 #20 ENSGT00940000160276 #21 ENSGT00870000136537 #22 ENSGT00950000182940.b.a.b #23 ENSGT00510000048165 #24 ENSGT00940000165753 ENSGT00940000161215 ENSGT00950000186203 ENSGT00950000183112.b.b ENSGT00940000158522 ENSGT01060000248645 ENSGT00390000012355.B.b ENSGT01050000244841.A.a.b ENSGT00730000111185 ENSGT00390000005869.a ENSGT00390000014273.b ENSGT00940000164158.A ENSGT00940000164422 tuatara MODERN SPECIES 1930 ECM1 (ENSSPUG00000000589) #7 ENSSPUG00000000604 ENSSPUG00000000795 #9 PRPF3 (ENSSPUG00000000809) #11 MRPS21 (ENSSPUG00000000814) #12 CA14 (ENSSPUG00000000821) #16 APH1A (ENSSPUG00000000880) #15 GOT2 (ENSSPUG00000000897) ENSSPUG00000000905 ANP32E (ENSSPUG00000000918) #17 PLEKHO1 (ENSSPUG00000000927) #18 VPS45 (ENSSPUG00000000947) #19 OTUD7B (ENSSPUG00000000961) #20 MTMR11 (ENSSPUG00000000998) #21 ENSSPUG00000001025 SF3B4 (ENSSPUG00000001028) #22 SV2A (ENSSPUG00000001040) #23 BOLA1 (ENSSPUG00000001195) #24 ENSSPUG00000001204 ENSSPUG00000001218 ENSSPUG00000001224 TXNIP (ENSSPUG00000001302) POLR3GL (ENSSPUG00000001305) ANKRD34A (ENSSPUG00000001325) ENSSPUG00000001354 RBM8A (ENSSPUG00000001576) LIX1L (ENSSPUG00000001586) PEX11B (ENSSPUG00000001598) ENSSPUG00000001627 ITGA10 (ENSSPUG00000001665) RNF115 (ENSSPUG00000001822) Episquamata ANCESTRAL SPECIES 17 ENSGT00550000074892 ENSGT00940000161136 ENSGT00390000006215 #7 ENSGT00940000159348.e ENSGT00950000183094.a #9 ENSGT00390000011497 #11 ENSGT00500000045038 #12 ENSGT00390000018360 #13 ENSGT00940000156893 #16 ENSGT00390000002049.c.a #15 ENSGT00950000182907.a.a #17 ENSGT00530000063760.b #18 ENSGT00550000075028 #19 ENSGT00940000159172 #20 ENSGT00940000160276 #21 ENSGT00870000136537 #22 ENSGT00950000182940.b.a.b #23 ENSGT00510000048165 #24 ENSGT00940000165753 ENSGT00940000161215 ENSGT00950000183112.b.b.a ENSGT01030000234540.B.b.b ENSGT00940000155795 ENSGT00990000203615.b.a.a.a.a ENSGT01080000257365.b.a.b.b ENSGT00940000161314 ENSGT01030000235556 ENSGT00940000159936 ENSGT00390000019377.a ENSGT00390000000230 ENSGT00950000182900.D Laterata ANCESTRAL SPECIES 35 ENSGT00550000074892 ENSGT00940000161136 ENSGT00390000006215 #7 ENSGT00940000159348.e ENSGT00950000183094.a #9 ENSGT00390000011497 #11 ENSGT00500000045038 #12 ENSGT00390000018360 #13 ENSGT00940000156893 #16 ENSGT00390000002049.c.a #15 ENSGT00950000182907.a.a #17 ENSGT00530000063760.b #18 ENSGT00550000075028 #19 ENSGT00940000159172 #20 ENSGT00940000160276 #21 ENSGT00870000136537 #22 ENSGT00950000182940.b.a.b #23 ENSGT00510000048165 #24 ENSGT00940000165753 ENSGT00940000161215 ENSGT00950000183112.b.b.a ENSGT01030000234540.B.b.b ENSGT00940000155795 ENSGT00990000203615.b.a.a.a.a ENSGT01080000257365.b.a.b.b ENSGT00940000161314 ENSGT01030000235556 ENSGT00940000159936 ENSGT00390000019377.a ENSGT00390000000230 ENSGT00950000182900.D Argentine black and white tegu MODERN SPECIES 78 PI4KB (ENSSMRG00000010084) ADAMTSL4 (ENSSMRG00000010079) ECM1 (ENSSMRG00000010077) #7 ENSSMRG00000008037 RPRD2 (ENSSMRG00000008019) #9 PRPF3 (ENSSMRG00000008016) #11 MRPS21 (ENSSMRG00000008015) #12 CIART (ENSSMRG00000008013) #13 CA14 (ENSSMRG00000007920) #16 APH1A (ENSSMRG00000007917) #15 ANP32E (ENSSMRG00000007909) #17 PLEKHO1 (ENSSMRG00000007902) #18 VPS45 (ENSSMRG00000007898) #19 OTUD7B (ENSSMRG00000007889) #20 MTMR11 (ENSSMRG00000007881) #21 SF3B4 (ENSSMRG00000007878) #22 SV2A (ENSSMRG00000007870) #23 BOLA1 (ENSSMRG00000007868) #24 ENSSMRG00000007864 ENSSMRG00000007856 ENSSMRG00000007852 ENSSMRG00000007851 KIRREL1 (ENSSMRG00000007850) KCNJ9 (ENSSMRG00000007849) IGSF8 (ENSSMRG00000007758) ENSSMRG00000007755 ATP1A2 (ENSSMRG00000007749) CASQ1 (ENSSMRG00000007748) PEA15 (ENSSMRG00000007738) ENSSMRG00000007734 PEX19 (ENSSMRG00000007733) Common wall lizard MODERN SPECIES 7 ENSPMRG00000017779 ENSPMRG00000017780 ECM1 (ENSPMRG00000017782) #7 ENSPMRG00000017793 RPRD2 (ENSPMRG00000017803) #9 ENSPMRG00000017810 ENSPMRG00000017813 #12 ENSPMRG00000017815 ENSPMRG00000017818 #16 APH1A (ENSPMRG00000017828) #15 ANP32E (ENSPMRG00000017839) #17 PLEKHO1 (ENSPMRG00000017850) #18 VPS45 (ENSPMRG00000017865) #19 OTUD7B (ENSPMRG00000017928) #20 MTMR11 (ENSPMRG00000017939) #21 SF3B4 (ENSPMRG00000017956) #22 SV2A (ENSPMRG00000017961) #23 BOLA1 (ENSPMRG00000017971) #24 ENSPMRG00000017977 ENSPMRG00000017980 ENSPMRG00000017983 ENSPMRG00000017989 ENSPMRG00000017994 ENSPMRG00000018014 ENSPMRG00000018021 ENSPMRG00000018026 ENSPMRG00000018034 ENSPMRG00000018048 ENSPMRG00000018055 ENSPMRG00000018065 ENSPMRG00000018069 Toxicofera ANCESTRAL SPECIES 27 ENSGT00550000074892 ENSGT00940000161136 ENSGT00390000006215 #7 ENSGT00940000159348.e ENSGT00950000183094.a #9 ENSGT00390000011497 #11 ENSGT00500000045038 #12 ENSGT00390000018360 #13 ENSGT00940000156893 #16 ENSGT00390000002049.c.a #15 ENSGT00950000182907.a.a #17 ENSGT00530000063760.b #18 ENSGT00550000075028 #19 ENSGT00940000159172 #20 ENSGT00940000160276 #21 ENSGT00870000136537 #22 ENSGT00950000182940.b.a.b #23 ENSGT00510000048165 #24 ENSGT00950000186203 ENSGT00950000183112.b.b.a ENSGT00940000155795 ENSGT00990000203615.b.a.a.a.a ENSGT01080000257365.b.a.b.b ENSGT00940000161314 ENSGT01030000235556 ENSGT00940000159936 ENSGT00390000019377.a ENSGT00390000000230 ENSGT00950000182900.D ENSGT00390000010993 ENSGT00440000034367 Elapidae ANCESTRAL SPECIES 25 ENSGT00390000011497 #11 ENSGT00500000045038 #12 ENSGT00390000018360 #13 ENSGT00940000156893 #16 ENSGT00390000002049.c.a #15 ENSGT00950000182907.a.a #17 ENSGT00530000063760.b #18 ENSGT00550000075028 #19 ENSGT00940000159172 #20 ENSGT00940000160276 #21 ENSGT00870000136537 #22 ENSGT00950000182940.b.a.b #23 ENSGT00510000048165 #24 ENSGT00940000161215 ENSGT00950000183112.b.b.a ENSGT00950000186203 ENSGT00940000155795 ENSGT00990000203615.b.a.a.a.a ENSGT01080000257365.b.a.b.b ENSGT00940000161314 ENSGT01030000235556 ENSGT00940000159936 ENSGT00390000019377.a ENSGT00390000000230 ENSGT00950000182900.D ENSGT00390000010993 Indian cobra MODERN SPECIES 17 PRPF3 (ENSNNAG00000010289) #11 MRPS21 (ENSNNAG00000016273) #12 CIART (ENSNNAG00000016262) #13 CA14 (ENSNNAG00000016244) #16 APH1A (ENSNNAG00000016205) #15 ANP32E (ENSNNAG00000016195) #17 PLEKHO1 (ENSNNAG00000016181) #18 VPS45 (ENSNNAG00000016162) #19 OTUD7B (ENSNNAG00000016147) #20 MTMR11 (ENSNNAG00000016103) #21 SF3B4 (ENSNNAG00000016086) #22 SV2A (ENSNNAG00000016009) #23 BOLA1 (ENSNNAG00000015987) #24 ENSNNAG00000015985 ENSNNAG00000015975 ENSNNAG00000015963 ENSNNAG00000015945 KIRREL1 (ENSNNAG00000015845) KCNJ10 (ENSNNAG00000015824) KCNJ9 (ENSNNAG00000015815) IGSF8 (ENSNNAG00000015805) ENSNNAG00000015796 ATP1A2 (ENSNNAG00000015779) CASQ1 (ENSNNAG00000015756) PEA15 (ENSNNAG00000015745) ENSNNAG00000015717 Elapidae_a ANCESTRAL SPECIES 51 ENSGT00390000011497 #11 ENSGT00500000045038 #12 ENSGT00390000018360 #13 ENSGT00940000156893 #16 ENSGT00390000002049.c.a #15 ENSGT00950000182907.a.a #17 ENSGT00530000063760.b #18 ENSGT00550000075028.l #19 ENSGT00550000075028.k #19 ENSGT00940000159172 #20 ENSGT00940000160276 #21 ENSGT00870000136537 #22 ENSGT00950000182940.b.a.b #23 ENSGT00510000048165 #24 ENSGT00940000161215 ENSGT00950000186203 ENSGT00950000183112.b.b.a ENSGT00940000155795 ENSGT00990000203615.b.a.a.a.a ENSGT01080000257365.b.a.b.b ENSGT00940000161314 ENSGT01030000235556 ENSGT00940000159936 ENSGT00390000019377.a ENSGT00390000000230 ENSGT00950000182900.D ENSGT00390000010993 Acanthophiinae ANCESTRAL SPECIES 51 ENSGT00390000011497 #11 ENSGT00500000045038 #12 ENSGT00390000018360 #13 ENSGT00940000156893 #16 ENSGT00390000002049.c.a #15 ENSGT00950000182907.a.a #17 ENSGT00530000063760.b #18 ENSGT00550000075028.l #19 ENSGT00940000159172 #20 ENSGT00940000160276 #21 ENSGT00870000136537 #22 ENSGT00950000182940.b.a.b #23 ENSGT00510000048165 #24 ENSGT00940000161215 ENSGT00950000186203 ENSGT00950000183112.b.b.a ENSGT00940000155795 ENSGT00990000203615.b.a.a.a.a ENSGT01080000257365.b.a.b.b ENSGT00940000161314 ENSGT01030000235556 ENSGT00940000159936 ENSGT00390000019377.a ENSGT00390000000230 ENSGT00950000182900.D ENSGT00390000010993 Mainland tiger snake MODERN SPECIES 271 PRPF3 (ENSNSUG00000008331) #11 MRPS21 (ENSNSUG00000008330) #12 CIART (ENSNSUG00000008329) #13 CA14 (ENSNSUG00000008328) #16 ANP32E (ENSNSUG00000008327) #17 PLEKHO1 (ENSNSUG00000008321) #18 VPS45 (ENSNSUG00000008252) #19 OTUD7B (ENSNSUG00000008243) #20 MTMR11 (ENSNSUG00000008241) #21 SF3B4 (ENSNSUG00000008240) #22 SV2A (ENSNSUG00000008175) #23 BOLA1 (ENSNSUG00000008174) #24 ENSNSUG00000008173 ENSNSUG00000008172 ENSNSUG00000008171 ENSNSUG00000008170 KCNJ9 (ENSNSUG00000008169) IGSF8 (ENSNSUG00000008147) ENSNSUG00000008146 ATP1A2 (ENSNSUG00000007855) CASQ1 (ENSNSUG00000007854) PEA15 (ENSNSUG00000007852) ENSNSUG00000007849 PEX19 (ENSNSUG00000007621) ENSNSUG00000007619 Eastern brown snake MODERN SPECIES 133 PRPF3 (ENSPTXG00000009628) #11 MRPS21 (ENSPTXG00000009627) #12 CIART (ENSPTXG00000009620) #13 CA14 (ENSPTXG00000009616) #16 ENSPTXG00000009615 #15 ANP32E (ENSPTXG00000009614) #17 PLEKHO1 (ENSPTXG00000009613) #18 VPS45 (ENSPTXG00000009612) #19 OTUD7B (ENSPTXG00000009611) #20 MTMR11 (ENSPTXG00000009610) #21 SF3B4 (ENSPTXG00000009609) #22 SV2A (ENSPTXG00000009608) #23 BOLA1 (ENSPTXG00000009606) #24 ENSPTXG00000009604 ENSPTXG00000009602 ENSPTXG00000009601 ENSPTXG00000009596 KIRREL1 (ENSPTXG00000009587) KCNJ10 (ENSPTXG00000009579) KCNJ9 (ENSPTXG00000009578) IGSF8 (ENSPTXG00000009576) ATP1A2 (ENSPTXG00000009335) ENSPTXG00000009317 ENSPTXG00000009313 PEA15 (ENSPTXG00000009312) ENSPTXG00000009309 Blue-lipped sea krait MODERN SPECIES 3056 OTUD7B (ENSLLTG00000015336) #20 MTMR11 (ENSLLTG00000015323) #21 SF3B4 (ENSLLTG00000015318) #22 SV2A (ENSLLTG00000015313) #23 BOLA1 (ENSLLTG00000015310) #24 ENSLLTG00000015308 ENSLLTG00000015306 ENSLLTG00000015303 KIRREL1 (ENSLLTG00000015298) KCNJ10 (ENSLLTG00000015290) KCNJ9 (ENSLLTG00000015287) ENSLLTG00000015282 IGSF8 (ENSLLTG00000015275) ENSLLTG00000015268 ATP1A2 (ENSLLTG00000015261) CASQ1 (ENSLLTG00000015259) PEA15 (ENSLLTG00000015255) ENSLLTG00000015245 Lizard MODERN SPECIES 1787 ENSACAG00000027514 #21 ENSACAG00000010019 #22 Anura ANCESTRAL SPECIES 193 ENSGT01010000223749 ENSGT01100000263494.a.b.a.c.b.a.b ENSGT01100000263574.c.b ENSGT00950000182907.a.a #17 ENSGT00530000063760.b #18 ENSGT00550000075028 #19 ENSGT00940000159172 #20 ENSGT00940000160276 #21 ENSGT00870000136537 #22 ENSGT00950000182940.b.a.b #23 ENSGT00510000048165 #24 ENSGT00940000165753 ENSGT00950000183112.b.b ENSGT00940000158522 ENSGT00940000165856 ENSGT01100000264033 ENSGT00390000012355.B.b Leishan spiny toad MODERN SPECIES 4 ENSLLEG00000027364 ENSLLEG00000027396 ETV3 (ENSLLEG00000027474) ENSLLEG00000027510 ARHGEF11 (ENSLLEG00000027666) ENSLLEG00000028417 ENSLLEG00000028435 ENSLLEG00000028449 ANP32E (ENSLLEG00000028481) #17 PLEKHO1 (ENSLLEG00000028538) #18 VPS45 (ENSLLEG00000028578) #19 OTUD7B (ENSLLEG00000028747) #20 ENSLLEG00000028801 MTMR11 (ENSLLEG00000028824) #21 ENSLLEG00000028898 SF3B4 (ENSLLEG00000028926) #22 ENSLLEG00000029034 ##37 ENSLLEG00000029235 ENSLLEG00000029242 METTL25B (ENSLLEG00000029256) ISG20L2 (ENSLLEG00000029282) ENSLLEG00000029289 CRABP2 (ENSLLEG00000029301) ENSLLEG00000029323 ENSLLEG00000029355 ENSLLEG00000029391 ENSLLEG00000029407 ENSLLEG00000029460 HAPLN2 (ENSLLEG00000029472) RHBG (ENSLLEG00000029486) ENSLLEG00000029507 Frog MODERN SPECIES 8 ENSXETG00000037121 ENSXETG00000045014 ENSXETG00000042759 ENSXETG00000045591 ENSXETG00000014685 ENSXETG00000036274 ENSXETG00000040366 ENSXETG00000041196 ENSXETG00000035210 anp32e (ENSXETG00000015745) #17 ENSXETG00000034971 plekho1 (ENSXETG00000015750) #18 vps45 (ENSXETG00000015753) #19 otud7b (ENSXETG00000015765) #20 mtmr11 (ENSXETG00000011034) #21 sf3b4 (ENSXETG00000011038) #22 sv2a (ENSXETG00000032522) #23 bola1 (ENSXETG00000033155) #24 nr2f5 (ENSXETG00000011046) hjv (ENSXETG00000040701) txnip (ENSXETG00000011050) polr3gl (ENSXETG00000011053) ankrd34a (ENSXETG00000011054) ENSXETG00000041795 ENSXETG00000036611 ENSXETG00000047155 ENSXETG00000045399 ENSXETG00000036193 ENSXETG00000035193 ENSXETG00000043317 ENSXETG00000042982 Coelacanth MODERN SPECIES 325 SF3B4 (ENSLACG00000004436) #22 SV2A (ENSLACG00000006807) #23 BOLA1 (ENSLACG00000008786) #24 nr2f5 (ENSLACG00000010560) HJV (ENSLACG00000012151) TXNIP (ENSLACG00000012529) ENSLACG00000013217 ANKRD34A (ENSLACG00000013573) ENSLACG00000014236 RBM8A (ENSLACG00000014365) ENSLACG00000015056 ENSLACG00000015295 ENSLACG00000015473 NTRK1 (ENSLACG00000015751) ENSLACG00000016286 HDGF (ENSLACG00000016471) Actinopterygii ANCESTRAL SPECIES 291 ENSGT00940000154566 ENSGT00940000160567 ENSGT01030000234534.B.a.a.b ENSGT00940000159412 ENSGT00760000119652 ENSGT00390000005869.a ENSGT00730000111185 ENSGT00940000159172 #20 ENSGT00940000160276 #21 ENSGT00870000136537 #22 ENSGT00950000182940.b.a.b #23 ENSGT00510000048165 #24 ENSGT00940000165753 Reedfish MODERN SPECIES 10 mrpl24 (ENSECRG00000000934) mettl25b (ENSECRG00000000966) ISG20L2 (ENSECRG00000000993) bcan (ENSECRG00000001033) hapln2 (ENSECRG00000001088) rhbg (ENSECRG00000001112) mef2d (ENSECRG00000001143) ENSECRG00000001168 ENSECRG00000001193 ntrk1 (ENSECRG00000001249) afp4 (ENSECRG00000001279) LIX1L (ENSECRG00000001292) rbm8a (ENSECRG00000001316) otud7b (ENSECRG00000001338) #20 mtmr11 (ENSECRG00000001370) #21 sf3b4 (ENSECRG00000001417) #22 SV2A (ENSECRG00000001437) #23 bola1 (ENSECRG00000001468) #24 nr2f5 (ENSECRG00000001479) ENSECRG00000001494 ENSECRG00000001513 ENSECRG00000001589 IL6R (ENSECRG00000001666) ATP8B2 (ENSECRG00000001706) aqp10b (ENSECRG00000001873) ENSECRG00000002077 ENSECRG00000002123 ENSECRG00000002171 ENSECRG00000002213 ubap2l (ENSECRG00000002254) ENSECRG00000002332 Neopterygii ANCESTRAL SPECIES 155 ENSGT00940000159412 ENSGT00760000119652 ENSGT00390000005869.a ENSGT00730000111185 ENSGT00940000159172 #20 ENSGT00940000160276 #21 ENSGT00870000136537 #22 ENSGT00950000182940.b.a.b #23 ENSGT00510000048165 #24 ENSGT00940000165753 ENSGT00940000165143.a.a ENSGT00390000008158.b.b.a.b ENSGT00390000008158.b.a ENSGT00390000008158.b.b.a.a ENSGT00510000051675 ENSGT00940000155620.r ENSGT00390000006100 ENSGT00940000158230 ENSGT00390000008765 ENSGT00390000007227.a ENSGT00390000010652.A.b ENSGT00940000160472 Osteoglossocephalai ANCESTRAL SPECIES 27 ENSGT00940000166527 ENSGT00940000166061.b ENSGT00390000002634.a.e ENSGT00940000167370 ENSGT00950000183180.a.b ENSGT00940000158438.n ENSGT00940000154566 ENSGT00940000160567 ENSGT00940000159412 ENSGT00760000119652 ENSGT00390000005869.a ENSGT00730000111185.db.b ENSGT00730000111185.eb ENSGT00940000159172 #20 ENSGT00940000160276 #21 ENSGT00870000136537 #22 ENSGT00950000182940.b.a.b.a.b #23 ENSGT00650000094861 ENSGT00950000182940.b.a.b.a.a #23 ENSGT00510000048165 #24 ENSGT00940000165753 ENSGT00390000010118.c.b ENSGT00940000165143.a.b ENSGT00940000165143.a.a ENSGT00390000008158.b.b.a.b ENSGT00390000008158.b.a ENSGT00390000008158.b.b.a.a ENSGT00510000051675 ENSGT00940000155620.r ENSGT00390000006100 ENSGT00940000158230.b.a Clupeocephala ANCESTRAL SPECIES 712 ENSGT00870000136537 #22 ENSGT00950000182940.b.a.b.a.b #23 Euteleosteomorpha ANCESTRAL SPECIES 417 ENSGT00760000119766 ENSGT00390000005869.a ENSGT00870000136537 #22 ENSGT00950000182940.b.a.b.a.b #23 Protacanthopterygii ANCESTRAL SPECIES ENSGT00950000182919.B.a.h ENSGT00940000159283.c.a ENSGT00940000158522.m ENSGT00990000204388 ENSGT00390000004097.b ENSGT01050000244841.A.a.a.b ENSGT00940000164559.A ENSGT00390000005125 ENSGT00940000160977.f ENSGT00940000164926 ENSGT00940000158341.a ENSGT01030000234542.b.a.a.a.a.g.b ENSGT00940000158438.m ENSGT00760000119766 ENSGT00390000005869.a ENSGT00870000136537 #22 ENSGT00950000182940.b.a.b.a.b #23 ENSGT00940000156479.b ENSGT00940000159220.d ENSGT00950000183211.a.b.b ENSGT00390000006790.b ENSGT00530000063631.a.k ENSGT00390000010779.a.b.a ENSGT00940000177109 ENSGT00390000002381.a ENSGT00940000160858 ENSGT00390000015641 ENSGT00940000159821 ENSGT00950000183151.b ENSGT00940000162035 ENSGT00940000154725.i Salmoninae DUPLICATION Salmoninae ANCESTRAL SPECIES 1153 ENSGT00760000119766.a ENSGT00390000005869.a.d ENSGT00870000136537.a #22 ENSGT00950000182940.b.a.b.a.b.d #23 Salmoninae_a ANCESTRAL SPECIES 28 ENSGT00990000204388.d ENSGT00390000004097.b.j.b ENSGT01050000244841.A.a.a.b.d ENSGT00940000164559.A.d ENSGT00390000005125.q ENSGT00390000005125.p.b ENSGT00940000160977.f.e ENSGT00940000164926.e.a ENSGT00940000158341.a.e ENSGT01030000234542.b.a.a.a.a.g.a ENSGT00940000158438.m.d.a ENSGT01030000234534.B.a.a.b ENSGT00940000155238.ab ENSGT00760000119766.a ENSGT00390000005869.a.d ENSGT00870000136537.a #22 ENSGT00950000182940.b.a.b.a.b.d #23 ENSGT00940000156479.b.e ENSGT00940000159220.d.d ENSGT00950000183211.a.b.b.d ENSGT00390000006790.b.l ENSGT00510000047030.d.e.a ENSGT00530000063631.a.k.c ENSGT00390000010779.a.b.a.a.b ENSGT01100000265169 ENSGT00390000002381.a.e ENSGT00940000160858.e ENSGT00390000015641.i ENSGT00940000159821.c ENSGT00950000183151.b.r ENSGT00940000162035.j Salmo ANCESTRAL SPECIES 2 ENSGT00940000158522.m.k ENSGT00990000204388.d ENSGT00390000004097.b.j.b ENSGT01050000244841.A.a.a.b.d ENSGT00940000164559.A.d ENSGT00390000005125.q ENSGT00940000160977.f.e ENSGT00940000164926.e.a ENSGT00940000158341.a.e ENSGT01030000234542.b.a.a.a.a.g.a ENSGT00940000158438.m.d.a ENSGT01030000234534.B.a.a.b ENSGT00940000155238.ab ENSGT00760000119766.a ENSGT00390000005869.a.d ENSGT00870000136537.a #22 ENSGT00950000182940.b.a.b.a.b.d #23 ENSGT00940000156479.b.e ENSGT00940000159220.d.d ENSGT00950000183211.a.b.b.d ENSGT00390000006790.b.l ENSGT00510000047030.d.e.a ENSGT00530000063631.a.k.c ENSGT00390000010779.a.b.a.a.b ENSGT01100000265169 ENSGT00390000002381.a.e ENSGT00940000160858.e ENSGT00390000015641.i ENSGT00940000159821.c ENSGT00950000183151.b.r ENSGT00940000162035.j River trout MODERN SPECIES 27 txnipa (ENSSTUG00000045792) polr3gla (ENSSTUG00000045798) gatad2b (ENSSTUG00000045810) gnrhr1 (ENSSTUG00000045828) ENSSTUG00000045833 SSR2 (ENSSTUG00000045894) ENSSTUG00000045916 ENSSTUG00000045945 arhgef1a (ENSSTUG00000046029) tpm3 (ENSSTUG00000047447) RXFP4 (ENSSTUG00000047492) SYNGAP1 (ENSSTUG00000047510) septin10 (ENSSTUG00000048069) ENSSTUG00000048127 LIX1L (ENSSTUG00000048131) sf3b4 (ENSSTUG00000048140) #22 SV2A (ENSSTUG00000048151) #23 dtnbp1b (ENSSTUG00000048159) jarid2b (ENSSTUG00000048175) ENSSTUG00000048368 pard6gb (ENSSTUG00000048373) bloc1s4 (ENSSTUG00000048388) nutf2l (ENSSTUG00000048403) adnp2b (ENSSTUG00000048407) txnl4a (ENSSTUG00000048412) ENSSTUG00000048418 SLC66A2 (ENSSTUG00000048419) ENSSTUG00000048439 ctdp1 (ENSSTUG00000048447) ENSSTUG00000048460 adck5 (ENSSTUG00000048476) Atlantic salmon MODERN SPECIES 19 ENSSSAG00000063376 ENSSSAG00000098425 ENSSSAG00000063441 ENSSSAG00000063461 ENSSSAG00000121181 arhgef1a (ENSSSAG00000008946) tpm3 (ENSSSAG00000009656) ENSSSAG00000058493 ENSSSAG00000099474 ENSSSAG00000009974 ENSSSAG00000112565 ENSSSAG00000010139 ENSSSAG00000117880 ENSSSAG00000014383 ENSSSAG00000093001 ENSSSAG00000014767 #22 ENSSSAG00000007474 #23 dtnbp1b (ENSSSAG00000021623) jarid2b (ENSSSAG00000022529) pard6gb (ENSSSAG00000032973) bloc1s4 (ENSSSAG00000033114) ENSSSAG00000111443 ENSSSAG00000120832 ENSSSAG00000033402 ENSSSAG00000033882 ENSSSAG00000034116 ENSSSAG00000091539 adck5 (ENSSSAG00000035630) cpsf1 (ENSSSAG00000041135) ENSSSAG00000042761 ST3GAL1 (ENSSSAG00000042773) Oncorhynchus ANCESTRAL SPECIES 29 ENSGT00940000158522.m.k ENSGT00990000204388.d ENSGT00390000004097.b.j.b ENSGT01050000244841.A.a.a.b.d ENSGT00940000164559.A.d ENSGT00390000005125.p.b ENSGT00940000160977.f.e ENSGT00940000164926.e.a ENSGT00940000158341.a.e ENSGT01030000234542.b.a.a.a.a.g.a ENSGT00940000158438.m.d.a ENSGT01030000234534.B.a.a.b ENSGT00940000155238.ab ENSGT00760000119766.a ENSGT00390000005869.a.d ENSGT00870000136537.a #22 ENSGT00950000182940.b.a.b.a.b.d #23 ENSGT00940000156479.b.e ENSGT00940000159220.d.d ENSGT00950000183211.a.b.b.d ENSGT00390000006790.b.l ENSGT00510000047030.d.e.a ENSGT00530000063631.a.k.c ENSGT00390000010779.a.b.a.a.b ENSGT01100000265169 ENSGT00390000002381.a.e ENSGT00940000160858.e ENSGT00390000015641.i ENSGT00940000159821.c ENSGT00950000183151.b.r ENSGT00940000162035.j Oncorhynchus_a ANCESTRAL SPECIES 29 ENSGT00940000159283.c.a.c ENSGT00940000158522.m.k ENSGT00990000204388.d ENSGT00390000004097.b.j.b ENSGT01050000244841.A.a.a.b.d ENSGT00940000164559.A.d ENSGT00390000005125.p.b ENSGT00940000160977.f.e ENSGT00940000164926.e.a ENSGT00940000158341.a.e ENSGT00940000158438.m.d.a ENSGT01030000234534.B.a.a.b ENSGT00940000155238.ab ENSGT00760000119766.a ENSGT00390000005869.a.d ENSGT00870000136537.a #22 ENSGT00950000182940.b.a.b.a.b.d #23 ENSGT00940000156479.b.e ENSGT00940000159220.d.d ENSGT00950000183211.a.b.b.d ENSGT00390000006790.b.l ENSGT00510000047030.d.e.a ENSGT00530000063631.a.k.c ENSGT00390000010779.a.b.a.a.b ENSGT01100000265169 ENSGT00390000002381.a.e ENSGT00940000160858.e ENSGT00390000015641.i ENSGT00940000159821.c ENSGT00950000183151.b.r ENSGT00940000162035.j.a Chinook salmon MODERN SPECIES 4 txnipa (ENSOTSG00005009674) polr3gla (ENSOTSG00005009673) gatad2b (ENSOTSG00005009672) gnrhr1 (ENSOTSG00005009671) ENSOTSG00005009670 ssr2 (ENSOTSG00005009659) ENSOTSG00005009653 ENSOTSG00005009652 arhgef1a (ENSOTSG00005009650) ENSOTSG00005009634 SYNGAP1 (ENSOTSG00005007509) ENSOTSG00005007489 septin10 (ENSOTSG00005007177) ENSOTSG00005007170 LIX1L (ENSOTSG00005007167) sf3b4 (ENSOTSG00005007166) #22 SV2A (ENSOTSG00005005937) #23 dtnbp1b (ENSOTSG00005005933) jarid2b (ENSOTSG00005005836) pard6gb (ENSOTSG00005005826) bloc1s4 (ENSOTSG00005005824) nutf2l (ENSOTSG00005005822) adnp2b (ENSOTSG00005005821) txnl4a (ENSOTSG00005005817) ENSOTSG00005005815 SLC66A2 (ENSOTSG00005005458) ENSOTSG00005005441 ctdp1 (ENSOTSG00005005371) adck5 (ENSOTSG00005005141) cpsf1 (ENSOTSG00005002045) ENSOTSG00005002013 Coho salmon MODERN SPECIES 8 txnipa (ENSOKIG00005018718) ENSOKIG00005018699 gatad2b (ENSOKIG00005018686) gnrhr1 (ENSOKIG00005018676) ENSOKIG00005018667 ssr2 (ENSOKIG00005018634) ENSOKIG00005018592 ENSOKIG00005018576 arhgef1a (ENSOKIG00005016176) ENSOKIG00005015914 SYNGAP1 (ENSOKIG00005015506) ENSOKIG00005015474 septin10 (ENSOKIG00005015304) ENSOKIG00005015275 LIX1L (ENSOKIG00005015260) SF3B4 (ENSOKIG00005015237) #22 SV2A (ENSOKIG00005015171) #23 dtnbp1b (ENSOKIG00005015139) jarid2b (ENSOKIG00005014786) pard6gb (ENSOKIG00005014763) bloc1s4 (ENSOKIG00005014743) nutf2l (ENSOKIG00005014730) ENSOKIG00005014724 txnl4a (ENSOKIG00005014701) ENSOKIG00005014690 SLC66A2 (ENSOKIG00005014481) ENSOKIG00005014461 ctdp1 (ENSOKIG00005014395) adck5 (ENSOKIG00005014017) cpsf1 (ENSOKIG00005011937) ENSOKIG00005011777 Rainbow trout MODERN SPECIES 9 ENSOMYG00000027771 ENSOMYG00000027791 ENSOMYG00000027820 ENSOMYG00000034319 ssr2 (ENSOMYG00000027856) ENSOMYG00000027924 ENSOMYG00000027957 arhgef1a (ENSOMYG00000028629) tpm3 (ENSOMYG00000030887) ENSOMYG00000031029 ENSOMYG00000031476 ENSOMYG00000031567 ENSOMYG00000031891 ENSOMYG00000050387 ENSOMYG00000031912 ENSOMYG00000031944 #22 ENSOMYG00000032025 #23 dtnbp1b (ENSOMYG00000032083) jarid2b (ENSOMYG00000032151) pard6gb (ENSOMYG00000032312) bloc1s4 (ENSOMYG00000032318) nutf2l (ENSOMYG00000032324) ENSOMYG00000051528 ENSOMYG00000032336 txnl4a (ENSOMYG00000032340) txnl4a (ENSOMYG00000032353) ENSOMYG00000032356 SLC66A2 (ENSOMYG00000032438) ENSOMYG00000032537 ctdp1 (ENSOMYG00000032573) adck5 (ENSOMYG00000032752) Huchen MODERN SPECIES 4109 ENSHHUG00000016538 ENSHHUG00000016544 LIX1L (ENSHHUG00000016556) sf3b4 (ENSHHUG00000016568) #22 SV2A (ENSHHUG00000016572) #23 Salmoninae ANCESTRAL SPECIES 324 ENSGT00940000159283.c.a.d ENSGT00940000158522.m.l ENSGT00990000204388.c ENSGT00390000004097.b.j.a ENSGT01050000244841.A.a.a.b.c ENSGT00940000164559.A.c ENSGT00390000005125.p.a ENSGT00940000160977.f.f ENSGT00940000164926.e.b ENSGT00940000158341.a.f ENSGT01030000234542.b.a.a.a.a.g.b ENSGT00940000158438.m.d.b ENSGT00940000159930.db.b ENSGT00760000119652.f ENSGT00390000005869.a.c ENSGT00870000136537.b #22 ENSGT00950000182940.b.a.b.a.b.c #23 ENSGT00940000156479.b.f ENSGT00940000159220.d.c Huchen MODERN SPECIES 1810 ENSHHUG00000012566 st6galnac1.1 (ENSHHUG00000012568) ENSHHUG00000012580 ENSHHUG00000012588 LIX1L (ENSHHUG00000012592) sf3b4 (ENSHHUG00000012597) #22 SV2A (ENSHHUG00000012600) #23 ENSHHUG00000012615 jarid2b (ENSHHUG00000012620) ENSHHUG00000012678 ENSHHUG00000012681 ENSHHUG00000012700 Salmoninae_a ANCESTRAL SPECIES 5 ENSGT00940000159283.c.a.d ENSGT00940000158522.m.l ENSGT00990000204388.c ENSGT00390000004097.b.j.a ENSGT01050000244841.A.a.a.b.c ENSGT00940000164559.A.c ENSGT00390000005125.p.a ENSGT00940000160977.f.f ENSGT00940000164926.e.b ENSGT00940000158341.a.f ENSGT01030000234542.b.a.a.a.a.g.b ENSGT00940000158438.m.d.b ENSGT00940000159930.db.b ENSGT00760000119652.f ENSGT00390000005869.a.c ENSGT00870000136537.b #22 ENSGT00950000182940.b.a.b.a.b.c #23 ENSGT00940000156479.b.f ENSGT00940000159220.d.c ENSGT00950000183211.a.b.b.c ENSGT00390000006790.b.k ENSGT00510000047030.d.e.b ENSGT00530000063631.a.k.d ENSGT00390000010779.a.b.a.a.a ENSGT00940000177109 ENSGT00390000002381.a.f ENSGT00940000160858.f ENSGT00390000015641.j.b ENSGT00940000159821.d ENSGT00950000183151.b.q ENSGT00940000162035.i Salmo ANCESTRAL SPECIES 2 ENSGT00950000182919.B.a.h.c ENSGT00940000159283.c.a.d ENSGT00940000158522.m.l ENSGT00990000204388.c ENSGT00390000004097.b.j.a ENSGT01050000244841.A.a.a.b.c ENSGT00940000164559.A.c ENSGT00940000160977.f.f ENSGT00940000164926.e.b ENSGT00940000158341.a.f ENSGT01030000234542.b.a.a.a.a.g.b ENSGT00940000158438.m.d.b ENSGT00940000159930.db.b ENSGT00760000119652.f ENSGT00390000005869.a.c ENSGT00870000136537.b #22 ENSGT00950000182940.b.a.b.a.b.c #23 ENSGT00940000156479.b.f ENSGT00940000159220.d.c ENSGT00950000183211.a.b.b.c ENSGT00390000006790.b.k ENSGT00510000047030.d.e.b ENSGT00530000063631.a.k.d ENSGT00390000010779.a.b.a.a.a ENSGT00940000177109 ENSGT00390000002381.a.f ENSGT00940000160858.f ENSGT00390000015641.j.a.a ENSGT00940000159821.d ENSGT00950000183151.b.q ENSGT00940000162035.i River trout MODERN SPECIES 29 thbs3b (ENSSTUG00000031803) txnipa (ENSSTUG00000031744) polr3gla (ENSSTUG00000031726) gatad2b (ENSSTUG00000031702) gnrhr1 (ENSSTUG00000031678) ENSSTUG00000031591 ssr2 (ENSSTUG00000031547) ENSSTUG00000031502 ENSSTUG00000031465 arhgef1a (ENSSTUG00000027896) tpm3 (ENSSTUG00000027563) SYNGAP1 (ENSSTUG00000027397) st6galnac1.1 (ENSSTUG00000027379) ENSSTUG00000027371 LIX1L (ENSSTUG00000027360) sf3b4 (ENSSTUG00000027347) #22 SV2A (ENSSTUG00000027328) #23 dtnbp1b (ENSSTUG00000027319) jarid2b (ENSSTUG00000026924) pard6gb (ENSSTUG00000026908) bloc1s4 (ENSSTUG00000026905) nutf2l (ENSSTUG00000026903) adnp2b (ENSSTUG00000026896) txnl4a (ENSSTUG00000026866) ENSSTUG00000026861 SLC66A2 (ENSSTUG00000026856) ENSSTUG00000026849 ctdp1 (ENSSTUG00000026819) adck5 (ENSSTUG00000026422) cpsf1 (ENSSTUG00000022141) ENSSTUG00000022008 Atlantic salmon MODERN SPECIES 5 ENSSSAG00000104076 ENSSSAG00000006563 ENSSSAG00000006571 ENSSSAG00000006580 ENSSSAG00000121567 ENSSSAG00000006589 ssr2 (ENSSSAG00000006615) ENSSSAG00000006649 ENSSSAG00000006673 arhgef1a (ENSSSAG00000006726) tpm3 (ENSSSAG00000007064) ENSSSAG00000007164 ENSSSAG00000007448 ENSSSAG00000007439 ENSSSAG00000102866 ENSSSAG00000007467 #22 ENSSSAG00000015187 #23 dtnbp1b (ENSSSAG00000107512) jarid2b (ENSSSAG00000007518) pard6gb (ENSSSAG00000008188) bloc1s4 (ENSSSAG00000008194) ENSSSAG00000008208 ENSSSAG00000008220 TXN4A (ENSSSAG00000121408) SLC66A2 (ENSSSAG00000112471) ENSSSAG00000086265 ENSSSAG00000008258 ctdp1 (ENSSSAG00000008273) adck5 (ENSSSAG00000008336) cpsf1 (ENSSSAG00000008413) ENSSSAG00000009298 Oncorhynchus ANCESTRAL SPECIES 16 ENSGT00940000159283.c.a.d ENSGT00940000158522.m.l ENSGT00990000204388.c ENSGT00390000004097.b.j.a ENSGT01050000244841.A.a.a.b.c ENSGT00940000164559.A.c ENSGT00390000005125.p.a ENSGT00940000160977.f.f ENSGT00940000164926.e.b ENSGT00940000158341.a.f ENSGT01030000234542.b.a.a.a.a.g.b ENSGT00940000158438.m.d.b ENSGT00940000159930.db.b ENSGT00760000119766.b ENSGT00390000005869.a.c ENSGT00870000136537.b #22 ENSGT00950000182940.b.a.b.a.b.c #23 ENSGT00940000156479.b.f ENSGT00940000159220.d.c ENSGT00950000183211.a.b.b.c ENSGT00390000006790.b.k ENSGT00510000047030.d.e.b ENSGT00530000063631.a.k.d ENSGT00390000010779.a.b.a.a.a ENSGT00940000177109 ENSGT00390000002381.a.f ENSGT00940000160858.f ENSGT00390000015641.j.b ENSGT00940000159821.d ENSGT00950000183151.b.q ENSGT00940000162035.i Rainbow trout MODERN SPECIES 24 ENSOMYG00000027753 ENSOMYG00000003501 ENSOMYG00000058664 ENSOMYG00000013327 ENSOMYG00000013250 ssrb (ENSOMYG00000013193) ENSOMYG00000013176 ENSOMYG00000013156 arhgef1a (ENSOMYG00000012989) tpm3 (ENSOMYG00000012766) ENSOMYG00000012341 ENSOMYG00000012245 ENSOMYG00000068353 ENSOMYG00000075992 ENSOMYG00000012218 ENSOMYG00000012212 #22 ENSOMYG00000012120 #23 dtnbp1b (ENSOMYG00000012099) jarid2b (ENSOMYG00000012060) ENSOMYG00000061332 ENSOMYG00000070018 pard6gb (ENSOMYG00000012036) bloc1s4 (ENSOMYG00000012033) ntf2 (ENSOMYG00000012023) ENSOMYG00000012016 txnl4a (ENSOMYG00000012000) SLC66A2 (ENSOMYG00000011963) ENSOMYG00000051854 HSBP1 (ENSOMYG00000056559) ENSOMYG00000057813 ENSOMYG00000048406 Oncorhynchus_a ANCESTRAL SPECIES 6 ENSGT00940000159283.c.a.d ENSGT00940000158522.m.l ENSGT00990000204388.c ENSGT00390000004097.b.j.a ENSGT01050000244841.A.a.a.b.c ENSGT00940000164559.A.c ENSGT00390000005125.p.a ENSGT00940000160977.f.f ENSGT00940000164926.e.b ENSGT00940000158341.a.f ENSGT01030000234542.b.a.a.a.a.g.b ENSGT00940000158438.m.d.b ENSGT00940000159930.db.b ENSGT00760000119766.b ENSGT00390000005869.a.c ENSGT00870000136537.b #22 ENSGT00950000182940.b.a.b.a.b.c #23 ENSGT00940000156479.b.f ENSGT00940000159220.d.c ENSGT00950000183211.a.b.b.c ENSGT00390000006790.b.k ENSGT00510000047030.d.e.b ENSGT00530000063631.a.k.d ENSGT00390000010779.a.b.a.a.a ENSGT00940000177109 ENSGT00390000002381.a.f ENSGT00940000160858.f ENSGT00390000015641.j.b ENSGT00940000159821.d ENSGT00950000183151.b.q ENSGT00940000162035.i Coho salmon MODERN SPECIES 5 ENSOKIG00005025790 GATAD2B (ENSOKIG00005025805) ENSOKIG00005025815 ENSOKIG00005025827 ssr2 (ENSOKIG00005025889) ENSOKIG00005025915 ENSOKIG00005025928 arhgef1a (ENSOKIG00005026016) tpm3 (ENSOKIG00005027155) ENSOKIG00005027974 SYNGAP1 (ENSOKIG00005028026) ENSOKIG00005028460 st6galnac1.1 (ENSOKIG00005028470) ENSOKIG00005028486 LIX1L (ENSOKIG00005028505) sf3b4 (ENSOKIG00005028527) #22 SV2A (ENSOKIG00005028550) #23 dtnbp1b (ENSOKIG00005028669) jarid2b (ENSOKIG00005028716) pard6gb (ENSOKIG00005029157) bloc1s4 (ENSOKIG00005029165) nutf2l (ENSOKIG00005029174) adnp2b (ENSOKIG00005029193) txnl4a (ENSOKIG00005029226) ENSOKIG00005029310 SLC66A2 (ENSOKIG00005029327) ENSOKIG00005029343 ctdp1 (ENSOKIG00005029353) adck5 (ENSOKIG00005029411) cpsf1 (ENSOKIG00005029572) ENSOKIG00005030637 Chinook salmon MODERN SPECIES 24 thbs3b (ENSOTSG00005041370) txnipa (ENSOTSG00005041365) polr3gla (ENSOTSG00005041364) gatad2b (ENSOTSG00005041363) gnrhr1 (ENSOTSG00005041362) ENSOTSG00005041361 ssr2 (ENSOTSG00005041359) ENSOTSG00005041358 ENSOTSG00005041351 arhgef1a (ENSOTSG00005039497) tpm3 (ENSOTSG00005039013) SYNGAP1 (ENSOTSG00005038807) st6galnac1.1 (ENSOTSG00005038797) ENSOTSG00005038796 LIX1L (ENSOTSG00005038794) sf3b4 (ENSOTSG00005038793) #22 SV2A (ENSOTSG00005038533) #23 dtnbp1b (ENSOTSG00005038530) jarid2b (ENSOTSG00005038195) pard6gb (ENSOTSG00005038192) bloc1s4 (ENSOTSG00005038190) nutf2l (ENSOTSG00005038189) adnp2b (ENSOTSG00005038187) txnl4a (ENSOTSG00005038184) ENSOTSG00005038180 SLC66A2 (ENSOTSG00005038178) ENSOTSG00005038173 ctdp1 (ENSOTSG00005038171) adck5 (ENSOTSG00005038112) cpsf1 (ENSOTSG00005036266) ENSOTSG00005036259 Northern pike MODERN SPECIES 9 thbs3b (ENSELUG00000014052) txnipa (ENSELUG00000013926) polr3gla (ENSELUG00000013880) gatad2b (ENSELUG00000013804) gnrhr1 (ENSELUG00000013712) ENSELUG00000013686 ssr2 (ENSELUG00000013664) ENSELUG00000013621 ENSELUG00000013588 arhgef1a (ENSELUG00000013481) tpm3 (ENSELUG00000013238) SYNGAP1 (ENSELUG00000013100) septin10 (ENSELUG00000012964) ENSELUG00000012907 LIX1L (ENSELUG00000012899) sf3b4 (ENSELUG00000012876) #22 SV2A (ENSELUG00000012851) #23 dtnbp1b (ENSELUG00000012793) jarid2b (ENSELUG00000001620) pard6gb (ENSELUG00000012623) bloc1s4 (ENSELUG00000032256) nutf2l (ENSELUG00000012588) adnp2b (ENSELUG00000012571) txnl4a (ENSELUG00000027253) ENSELUG00000032330 SLC66A2 (ENSELUG00000012514) ENSELUG00000012477 ctdp1 (ENSELUG00000012427) adck5 (ENSELUG00000012384) cpsf1 (ENSELUG00000012271) ENSELUG00000001455 Acanthomorphata ANCESTRAL SPECIES 22 ENSGT00390000012138.a.b.d ENSGT00420000029792.qb.b ENSGT00940000154984.A ENSGT00390000008918 ENSGT00940000154697.a.a.a.b ENSGT00940000166830 ENSGT00940000154686.a ENSGT00390000018415 ENSGT00940000163010 ENSGT00940000155788.l ENSGT00390000003465.b.b.a ENSGT01090000260040.b.b.a.c.a ENSGT00940000160311.a.b ENSGT00760000119766 ENSGT00390000005869.a ENSGT00870000136537 #22 ENSGT00950000182940.b.a.b.a.b #23 ENSGT00940000155176.o.b ENSGT00940000166429 ENSGT00940000154996.a.a.b ENSGT00390000017503 ENSGT00940000158438.m ENSGT01030000234534.B.a.a.b ENSGT00940000161408 ENSGT00950000183051.a.a.a ENSGT00940000155549.a.a.b ENSGT00940000157893 ENSGT00530000063461.A.b ENSGT00550000074698 ENSGT00940000155113.a.a ENSGT00940000155784.C.u.b Euacanthomorphacea ANCESTRAL SPECIES ENSGT00420000029792.qb.b ENSGT00940000154984.A ENSGT00390000008918 ENSGT00940000154697.a.a.a.b ENSGT00940000166830 ENSGT00940000154686.a ENSGT00390000018415 ENSGT00940000162740.k.a ENSGT00940000163010 ENSGT00940000155788.l ENSGT00390000003465.b.b.a ENSGT01090000260040.b.b.a.c.a ENSGT00940000160311.a.b ENSGT00760000119766 ENSGT00390000005869.a ENSGT00870000136537 #22 ENSGT00950000182940.b.a.b.a.b #23 ENSGT00940000155176.o.b ENSGT00940000166429 ENSGT00940000154996.a.a.b ENSGT00390000017503 ENSGT00940000158438.m ENSGT01030000234534.B.a.a.b ENSGT00940000161408 ENSGT00950000183051.a.a.a ENSGT00940000155549.a.a.b ENSGT00940000157893 ENSGT00530000063461.A.b ENSGT00550000074698 ENSGT00940000155113.a.a ENSGT00940000155784.C.u.b Pinecone sodierfish MODERN SPECIES 2 zgc:136493 (ENSMMDG00005006444) ENSMMDG00005006439 zgc:136493 (ENSMMDG00005006435) ENSMMDG00005006219 ENSMMDG00005005833 zgc:136493 (ENSMMDG00005005718) ENSMMDG00005005576 zgc:136493 (ENSMMDG00005005572) ncaldb (ENSMMDG00005005568) grhl2b (ENSMMDG00005005562) znf706 (ENSMMDG00005005559) ENSMMDG00005005557 pabpc1b (ENSMMDG00005005388) ENSMMDG00005005345 LIX1L (ENSMMDG00005005334) sf3b4 (ENSMMDG00005005330) #22 SV2A (ENSMMDG00005005325) #23 ENSMMDG00005005316 ctss1 (ENSMMDG00005004164) lingo4a (ENSMMDG00005004108) vps72a (ENSMMDG00005004101) SYNGAP1 (ENSMMDG00005004075) ENSMMDG00005004053 znf516 (ENSMMDG00005004049) tshz1 (ENSMMDG00005004041) CSMD3 (ENSMMDG00005003424) trps1 (ENSMMDG00005003403) clptm1l (ENSMMDG00005003160) rplp1 (ENSMMDG00005003107) PTK2 (ENSMMDG00005003089) DENND3 (ENSMMDG00005002895) Percomorphaceae ANCESTRAL SPECIES 10 ENSGT00420000029792.qb.b ENSGT00940000154984.A ENSGT00390000008918 ENSGT00940000154697.a.a.a.b ENSGT00940000166830 ENSGT00940000154686.a ENSGT00390000018415 ENSGT00940000162740.k.a ENSGT00940000163010 ENSGT00940000155788.l ENSGT00390000003465.b.b.a ENSGT01090000260040.b.b.a.c.a ENSGT00940000160311.a.b ENSGT00760000119766 ENSGT00390000005869.a ENSGT00870000136537 #22 ENSGT00950000182940.b.a.b.a.b #23 ENSGT00940000155176.o.b ENSGT00940000166429 ENSGT00940000154996.a.a.b ENSGT00390000017503 ENSGT00940000158438.m ENSGT01030000234534.B.a.a.b ENSGT00940000161408 ENSGT00950000183051.a.a.a ENSGT00940000155549.a.a.b ENSGT00940000157893 ENSGT00530000063461.A.b ENSGT00550000074698 ENSGT00940000155113.a.a ENSGT00940000155784.C.u.b Tiger tail seahorse MODERN SPECIES 141 ENSHCOG00000003465 mef2d (ENSHCOG00000003436) tmem79a (ENSHCOG00000003359) hdac1 (ENSHCOG00000003352) eif3i (ENSHCOG00000003328) ptpn2b (ENSHCOG00000003308) psmg2 (ENSHCOG00000000861) zgc:136493 (ENSHCOG00000003284) ncaldb (ENSHCOG00000003277) grhl2b (ENSHCOG00000003264) znf706 (ENSHCOG00000003228) ywhaz (ENSHCOG00000003217) ENSHCOG00000003175 ENSHCOG00000003023 LIX1L (ENSHCOG00000003020) sf3b4 (ENSHCOG00000003014) #22 ENSHCOG00000003007 SV2A (ENSHCOG00000003000) #23 ENSHCOG00000002979 tbxta (ENSHCOG00000002972) nudc (ENSHCOG00000002958) kifap3a (ENSHCOG00000002941) ENSHCOG00000002934 zdhhc18b (ENSHCOG00000000084) arhgef1a (ENSHCOG00000002904) tpm3 (ENSHCOG00000002823) ENSHCOG00000002818 ssr2 (ENSHCOG00000002806) ENSHCOG00000002785 ENSHCOG00000002776 si:dkey-81h8.1 (ENSHCOG00000002751) Percomorphaceae_B ANCESTRAL SPECIES 15 ENSGT00420000029792.qb.b ENSGT00940000154984.A ENSGT00390000008918 ENSGT00940000154697.a.a.a.b ENSGT00940000166830 ENSGT00940000154686.a ENSGT00390000018415 ENSGT00940000162740.k.a ENSGT00940000163010 ENSGT00940000155788.l ENSGT00390000003465.b.b.a ENSGT01090000260040.b.b.a.c.a ENSGT00940000160311.a.b ENSGT00760000119766 ENSGT00390000005869.a ENSGT00870000136537 #22 ENSGT00950000182940.b.a.b.a.b #23 ENSGT00940000155176.o.b ENSGT00940000166429 ENSGT00940000154996.a.a.b ENSGT00390000017503 ENSGT00940000158438.m ENSGT01030000234534.B.a.a.b ENSGT00940000161408 ENSGT00950000183051.a.a.a ENSGT00940000155549.a.a.b ENSGT00940000157893 ENSGT00530000063461.A.b ENSGT00550000074698 ENSGT00940000155113.a.a ENSGT00940000155784.C.u.b Percomorphaceae_C ANCESTRAL SPECIES 15 ENSGT00420000029792.qb.b ENSGT00940000154984.A ENSGT00390000008918 ENSGT00940000154697.a.a.a.b ENSGT00940000166830 ENSGT00940000154686.a ENSGT00390000018415 ENSGT00940000162740.k.a ENSGT00940000163010 ENSGT00940000155788.l ENSGT00390000003465.b.b.a ENSGT01090000260040.b.b.a.c.a ENSGT00940000160311.a.b ENSGT00760000119766 ENSGT00390000005869.a ENSGT00870000136537 #22 ENSGT00950000182940.b.a.b.a.b #23 ENSGT00940000155176.o.b ENSGT00940000166429 ENSGT00940000154996.a.a.b ENSGT00390000017503 ENSGT00940000158438.m ENSGT01030000234534.B.a.a.b ENSGT00940000161408 ENSGT00950000183051.a.a.a ENSGT00940000155549.a.a.b ENSGT00940000157893 ENSGT00530000063461.A.b ENSGT00550000074698 ENSGT00940000155113.a.a ENSGT00940000155784.C.u.b Percomorphaceae_D ANCESTRAL SPECIES 14 ENSGT00420000029792.qb.b ENSGT00940000154984.A ENSGT00390000008918 ENSGT00940000154697.a.a.a.b ENSGT00940000166830 ENSGT00940000154686.a ENSGT00390000018415 ENSGT00940000162740.k.a ENSGT00940000163010 ENSGT00940000155788.l ENSGT00390000003465.b.b.a ENSGT01090000260040.b.b.a.c.a ENSGT00940000160311.a.b ENSGT00760000119766 ENSGT00390000005869.a ENSGT00870000136537 #22 ENSGT00950000182940.b.a.b.a.b #23 ENSGT00940000155176.o.b ENSGT00940000166429 ENSGT00940000154996.a.a.b ENSGT00390000017503 ENSGT00940000158438.m ENSGT01030000234534.B.a.a.b ENSGT00940000161408 ENSGT00950000183051.a.a.a ENSGT00940000155549.a.a.b ENSGT00940000157893 ENSGT00530000063461.A.b ENSGT00550000074698 ENSGT00940000155113.a.a ENSGT00940000155784.C.u.b Anabantaria ANCESTRAL SPECIES 16 ENSGT00420000029792.qb.b ENSGT00940000154984.A ENSGT00390000008918 ENSGT00940000154697.a.a.a.b ENSGT00940000166830 ENSGT00940000154686.a ENSGT00390000018415 ENSGT00940000162740.k.a ENSGT00940000163010 ENSGT00940000155788.l ENSGT00390000003465.b.b.a ENSGT01090000260040.b.b.a.c.a ENSGT00940000160311.a.b ENSGT00760000119766 ENSGT00390000005869.a ENSGT00870000136537 #22 ENSGT00950000182940.b.a.b.a.b #23 ENSGT00940000166429 ENSGT00940000154996.a.a.b ENSGT00390000017503 ENSGT00940000158438.m ENSGT01030000234534.B.a.a.b ENSGT00940000161408 ENSGT00950000183051.a.a.a ENSGT00940000155549.a.a.b ENSGT00940000157893 ENSGT00530000063461.A.b ENSGT00550000074698 ENSGT00940000155113.a.a ENSGT00940000155784.C.u.b ENSGT00950000182914.a.a.a.c.b Anabantoidei ANCESTRAL SPECIES 19 ENSGT00420000029792.qb.b ENSGT00940000154984.A ENSGT00390000008918 ENSGT00940000154697.a.a.a.b ENSGT00940000166830 ENSGT00940000154686.a ENSGT00390000018415 ENSGT00940000162740.k.a ENSGT00940000163010 ENSGT00940000155788.l ENSGT00390000003465.b.b.a ENSGT01090000260040.b.b.a.c.a ENSGT00940000160311.a.b ENSGT00760000119766 ENSGT00390000005869.a ENSGT00870000136537 #22 ENSGT00950000182940.b.a.b.a.b #23 ENSGT00940000166429 ENSGT00940000154996.a.a.b ENSGT00390000017503 ENSGT00940000158438.m ENSGT01030000234534.B.a.a.b ENSGT00940000161408 ENSGT00950000183051.a.a.a ENSGT00940000155549.a.a.b ENSGT00940000157893 ENSGT00530000063461.A.b ENSGT00550000074698 ENSGT00940000155113.a.a ENSGT00940000155784.C.u.b ENSGT00950000182914.a.a.a.c.b Climbing perch MODERN SPECIES 2 RIDA (ENSATEG00000028864) stk3 (ENSATEG00000013271) ENSATEG00000028757 ENSATEG00000013181 ENSATEG00000013135 ptpn2b (ENSATEG00000013109) psmg2 (ENSATEG00000013064) ENSATEG00000013055 ncaldb (ENSATEG00000013046) grhl2b (ENSATEG00000012994) znf706 (ENSATEG00000012982) ENSATEG00000012968 pabpc1b (ENSATEG00000012917) ENSATEG00000027797 ENSATEG00000012853 ENSATEG00000012844 #22 ENSATEG00000012795 #23 ENSATEG00000012784 ENSATEG00000012771 ENSATEG00000028699 ENSATEG00000012560 ENSATEG00000012551 ENSATEG00000012526 ENSATEG00000012508 ENSATEG00000012278 ENSATEG00000012244 clptm1l (ENSATEG00000012184) ENSATEG00000012174 ENSATEG00000012064 DENND3 (ENSATEG00000012018) ENSATEG00000011943 Siamese fighting fish MODERN SPECIES 2 RIDA (ENSBSLG00000017847) stk3 (ENSBSLG00000017896) polr2k (ENSBSLG00000017981) spag1a (ENSBSLG00000017994) ENSBSLG00000018014 ptpn2b (ENSBSLG00000018043) psmg2 (ENSBSLG00000018069) zgc:136493 (ENSBSLG00000018073) ncaldb (ENSBSLG00000018078) grhl2b (ENSBSLG00000018088) znf706 (ENSBSLG00000018104) ENSBSLG00000018113 pabpc1b (ENSBSLG00000018129) ENSBSLG00000018586 LIX1L (ENSBSLG00000018594) sf3b4 (ENSBSLG00000018611) #22 SV2A (ENSBSLG00000018624) #23 ctss1 (ENSBSLG00000018880) lingo4a (ENSBSLG00000018905) vps72a (ENSBSLG00000018912) SYNGAP1 (ENSBSLG00000019025) RXFP4 (ENSBSLG00000019841) znf516 (ENSBSLG00000008286) tshz1 (ENSBSLG00000008345) ENSBSLG00000008805 trps1 (ENSBSLG00000008809) clptm1l (ENSBSLG00000008845) rplp1 (ENSBSLG00000010024) PTK2 (ENSBSLG00000010100) DENND3 (ENSBSLG00000010895) SLC45A4 (ENSBSLG00000011127) Zig-zag eel MODERN SPECIES 2 rpl30 (ENSMAMG00000028277) RIDA (ENSMAMG00000025012) stk3 (ENSMAMG00000014252) ENSMAMG00000014290 ENSMAMG00000014303 ENSMAMG00000014330 ptpn2b (ENSMAMG00000014404) psmg2 (ENSMAMG00000014455) ncaldb (ENSMAMG00000014464) grhl2b (ENSMAMG00000014479) znf706 (ENSMAMG00000024516) ENSMAMG00000027637 pabpc1b (ENSMAMG00000014610) ENSMAMG00000027440 ENSMAMG00000014681 ENSMAMG00000014692 #22 ENSMAMG00000014698 #23 ENSMAMG00000014730 ENSMAMG00000014737 ENSMAMG00000014773 ENSMAMG00000014910 ENSMAMG00000025372 ENSMAMG00000014926 ENSMAMG00000014951 ENSMAMG00000026702 ENSMAMG00000015100 clptm1l (ENSMAMG00000015115) ENSMAMG00000015182 ENSMAMG00000015199 ENSMAMG00000015260 ENSMAMG00000015281 Carangaria ANCESTRAL SPECIES 14 ENSGT00420000029792.qb.b ENSGT00940000154984.A ENSGT00390000008918 ENSGT00940000154697.a.a.a.b ENSGT00940000166830 ENSGT00940000154686.a ENSGT00390000018415 ENSGT00940000162740.k.a ENSGT00940000163010 ENSGT00940000155788.l ENSGT00390000003465.b.b.a ENSGT01090000260040.b.b.a.c.a ENSGT00940000160311.a.b ENSGT00760000119766 ENSGT00390000005869.a ENSGT00870000136537 #22 ENSGT00950000182940.b.a.b.a.b #23 ENSGT00940000155176.o.b ENSGT00940000166429 ENSGT00940000154996.a.a.b ENSGT00390000017503 ENSGT00940000158438.m ENSGT01030000234534.B.a.a.b ENSGT00940000161408 ENSGT00950000183051.a.a.a ENSGT00940000155549.a.a.b ENSGT00940000157893 ENSGT00530000063461.A.b ENSGT00550000074698 ENSGT00940000155113.a.a ENSGT00940000155784.C.u.b Pleuronectoidei ANCESTRAL SPECIES 15 ENSGT00420000029792.qb.b ENSGT00940000154984.A ENSGT00390000008918 ENSGT00940000154697.a.a.a.b ENSGT00940000166830 ENSGT00940000154686.a ENSGT00390000018415 ENSGT00940000162740.k.a ENSGT00940000163010 ENSGT00940000155788.l ENSGT00390000003465.b.b.a ENSGT01090000260040.b.b.a.c.a ENSGT00940000160311.a.b ENSGT00760000119766 ENSGT00390000005869.a ENSGT00870000136537 #22 ENSGT00950000182940.b.a.b.a.b #23 ENSGT00940000155176.o.b ENSGT00940000166429 ENSGT00940000154996.a.a.b ENSGT00390000017503 ENSGT00940000158438.m ENSGT01030000234534.B.a.a.b ENSGT00940000161408 ENSGT00950000183051.a.a.a ENSGT00940000155549.a.a.b ENSGT00940000157893 ENSGT00530000063461.A.b ENSGT00550000074698 ENSGT00940000155113.a.a ENSGT00940000155784.C.u.b Turbot MODERN SPECIES 14 RIDA (ENSSMAG00000007263) stk3 (ENSSMAG00000007202) ENSSMAG00000007196 ENSSMAG00000007184 ENSSMAG00000007104 ptpn2b (ENSSMAG00000007068) psmg2 (ENSSMAG00000007039) ENSSMAG00000007000 ncaldb (ENSSMAG00000006981) grhl2b (ENSSMAG00000006955) znf706 (ENSSMAG00000022468) ywhaz (ENSSMAG00000006925) pabpc1b (ENSSMAG00000006869) ENSSMAG00000037593 ENSSMAG00000006846 ENSSMAG00000006837 #22 ENSSMAG00000006796 #23 ENSSMAG00000006780 ENSSMAG00000006733 ENSSMAG00000006726 ENSSMAG00000006697 ENSSMAG00000006587 ENSSMAG00000006570 ENSSMAG00000006560 ENSSMAG00000024835 ENSSMAG00000006107 ENSSMAG00000006061 ENSSMAG00000005950 ENSSMAG00000005698 DENND3 (ENSSMAG00000005636) ENSSMAG00000005307 Tongue sole MODERN SPECIES 9 SLC45A4 (ENSCSEG00000014948) dus3l (ENSCSEG00000014994) GPR20 (ENSCSEG00000015024) ENSCSEG00000015033 cndp2 (ENSCSEG00000015053) ptpn2b (ENSCSEG00000015116) psmg2 (ENSCSEG00000015153) zgc:136493 (ENSCSEG00000015165) ENSCSEG00000015168 ncaldb (ENSCSEG00000015173) grhl2b (ENSCSEG00000015179) znf706 (ENSCSEG00000015198) YWHAZ (ENSCSEG00000015224) ENSCSEG00000015241 LIX1L (ENSCSEG00000015252) sf3b4 (ENSCSEG00000015258) #22 SV2A (ENSCSEG00000015269) #23 ENSCSEG00000015296 ENSCSEG00000015305 lingo4a (ENSCSEG00000015313) vps72a (ENSCSEG00000015316) smad10a (ENSCSEG00000015323) snapin (ENSCSEG00000015342) chtopa (ENSCSEG00000015345) txnipa (ENSCSEG00000015379) gatad2b (ENSCSEG00000015387) gnrhr1 (ENSCSEG00000015396) ENSCSEG00000015405 mgat1b (ENSCSEG00000015414) vars2 (ENSCSEG00000015432) ppp1r11 (ENSCSEG00000015537) Carangaria_A ANCESTRAL SPECIES 16 ENSGT00940000154984.A ENSGT00940000164643 ENSGT00940000154697.a.a.a.b ENSGT00940000166830 ENSGT00940000154686.a ENSGT00390000018415 ENSGT00940000162740.k.a ENSGT00940000163010 ENSGT00940000155788.l ENSGT00390000003465.b.b.a ENSGT01090000260040.b.b.a.c.a ENSGT00940000153773.b ENSGT00940000160311.a.b ENSGT00760000119766 ENSGT00390000005869.a ENSGT00870000136537 #22 ENSGT00950000182940.b.a.b.a.b #23 ENSGT00940000155176.o.b ENSGT00940000166429 ENSGT00940000154996.a.a.b ENSGT00390000017503 ENSGT00940000158438.m ENSGT01030000234534.B.a.a.b ENSGT00940000161408 ENSGT00950000183051.a.a.a ENSGT00940000155549.a.a.b ENSGT00940000157893 ENSGT00530000063461.A.b ENSGT00550000074698 ENSGT00940000155113.a.a ENSGT00940000155784.C.u.b Seriola ANCESTRAL SPECIES 12 ENSGT00420000029792.qb.b ENSGT00940000154984.A ENSGT00390000008918 ENSGT00940000154697.a.a.a.b ENSGT00940000166830 ENSGT00940000154686.a ENSGT00390000018415 ENSGT00940000162740.k.a ENSGT00940000163010 ENSGT00940000155788.l ENSGT00390000003465.b.b.a ENSGT01090000260040.b.b.a.c.a ENSGT00940000160311.a.b ENSGT00760000119766 ENSGT00390000005869.a ENSGT00870000136537 #22 ENSGT00950000182940.b.a.b.a.b #23 ENSGT00940000155176.o.b ENSGT00940000166429 ENSGT00940000154996.a.a.b ENSGT00390000017503 ENSGT00940000158438.m ENSGT01030000234534.B.a.a.b ENSGT00940000161408 ENSGT00950000183051.a.a.a ENSGT00940000155549.a.a.b ENSGT00940000157893 ENSGT00530000063461.A.b ENSGT00550000074698 ENSGT00940000155113.a.a ENSGT00940000155784.C.u.b Yellowtail amberjack MODERN SPECIES 2890 stk3 (ENSSLDG00000013942) polr2k (ENSSLDG00000013975) spag1a (ENSSLDG00000013991) ENSSLDG00000014017 ptpn2b (ENSSLDG00000014037) psmg2 (ENSSLDG00000014051) zgc:136493 (ENSSLDG00000014066) ncaldb (ENSSLDG00000014082) ENSSLDG00000014094 ENSSLDG00000014105 znf706 (ENSSLDG00000014121) ENSSLDG00000014136 pabpc1b (ENSSLDG00000014156) ENSSLDG00000014190 LIX1L (ENSSLDG00000014214) sf3b4 (ENSSLDG00000014226) #22 SV2A (ENSSLDG00000014244) #23 ENSSLDG00000014274 ctss1 (ENSSLDG00000014290) lingo4a (ENSSLDG00000014304) vps72a (ENSSLDG00000014311) ENSSLDG00000014334 ENSSLDG00000014354 znf516 (ENSSLDG00000014366) Greater amberjack MODERN SPECIES 48 RIDA (ENSSDUG00000011665) stk3 (ENSSDUG00000011713) ENSSDUG00000011754 spag1a (ENSSDUG00000011767) ENSSDUG00000011788 ptpn2b (ENSSDUG00000011804) psmg2 (ENSSDUG00000011815) zgc:136493 (ENSSDUG00000011827) ncaldb (ENSSDUG00000011836) grhl2b (ENSSDUG00000011854) znf706 (ENSSDUG00000011931) ENSSDUG00000011944 pabpc1b (ENSSDUG00000011965) ENSSDUG00000012027 LIX1L (ENSSDUG00000012053) sf3b4 (ENSSDUG00000012064) #22 SV2A (ENSSDUG00000012082) #23 ENSSDUG00000012123 ctss1 (ENSSDUG00000012145) lingo4a (ENSSDUG00000012181) vps72a (ENSSDUG00000012188) SYNGAP1 (ENSSDUG00000012218) ENSSDUG00000012328 znf516 (ENSSDUG00000012341) tshz1 (ENSSDUG00000012354) CSMD3 (ENSSDUG00000012391) ENSSDUG00000012561 trps1 (ENSSDUG00000012576) clptm1l (ENSSDUG00000012627) rplp1 (ENSSDUG00000012713) PTK2 (ENSSDUG00000012750) Barramundi perch MODERN SPECIES 160 RIDA (ENSLCAG00010014208) stk3 (ENSLCAG00010014219) ENSLCAG00010014226 spag1a (ENSLCAG00010014238) ENSLCAG00010014245 ptpn2b (ENSLCAG00010014269) psmg2 (ENSLCAG00010014272) zgc:136493 (ENSLCAG00010014274) ncaldb (ENSLCAG00010014279) grhl2b (ENSLCAG00010014291) znf706 (ENSLCAG00010014299) ENSLCAG00010014301 PABPC3 (ENSLCAG00010014308) ENSLCAG00010014325 LIX1L (ENSLCAG00010014327) sf3b4 (ENSLCAG00010014331) #22 SV2A (ENSLCAG00010014334) #23 ENSLCAG00010014380 ENSLCAG00010014872 lingo4a (ENSLCAG00010014874) vps72a (ENSLCAG00010014878) SYNGAP1 (ENSLCAG00010014895) Eupercaria ANCESTRAL SPECIES 11 ENSGT00420000029792.qb.b ENSGT00940000154984.A ENSGT00390000008918 ENSGT00940000154697.a.a.a.b ENSGT00940000166830 ENSGT00940000154686.a ENSGT00390000018415 ENSGT00940000162740.k.a ENSGT00940000163010 ENSGT00940000155788.l ENSGT00390000003465.b.b.a ENSGT01090000260040.b.b.a.c.a ENSGT00940000160311.a.b ENSGT00760000119766 ENSGT00390000005869.a ENSGT00870000136537 #22 ENSGT00950000182940.b.a.b.a.b #23 ENSGT00940000155176.o.b ENSGT00940000166429 ENSGT00940000154996.a.a.b ENSGT00390000017503 ENSGT00940000158438.m ENSGT01030000234534.B.a.a.b ENSGT00940000161408 ENSGT00950000183051.a.a.a ENSGT00940000155549.a.a.b ENSGT00940000157893 ENSGT00530000063461.A.b ENSGT00550000074698 ENSGT00940000155113.a.a ENSGT00940000155784.C.u.b Eupecaria_A ANCESTRAL SPECIES 12 ENSGT00420000029792.qb.b ENSGT00940000154984.A ENSGT00390000008918 ENSGT00940000154697.a.a.a.b ENSGT00940000166830 ENSGT00940000154686.a ENSGT00390000018415 ENSGT00940000162740.k.a ENSGT00940000163010 ENSGT00940000155788.l ENSGT00390000003465.b.b.a ENSGT01090000260040.b.b.a.c.a ENSGT00940000160311.a.b ENSGT00760000119766 ENSGT00390000005869.a ENSGT00870000136537 #22 ENSGT00950000182940.b.a.b.a.b #23 ENSGT00940000155176.o.b ENSGT00940000166429 ENSGT00940000154996.a.a.b ENSGT00390000017503 ENSGT00940000158438.m ENSGT01030000234534.B.a.a.b ENSGT00940000161408 ENSGT00950000183051.a.a.a ENSGT00940000155549.a.a.b ENSGT00940000157893 ENSGT00530000063461.A.b ENSGT00550000074698 ENSGT00940000155113.a.a ENSGT00940000155784.C.u.b Ballan wrasse MODERN SPECIES 71 RIDA (ENSLBEG00000027122) polr2k (ENSLBEG00000027114) stk3 (ENSLBEG00000027094) spag1a (ENSLBEG00000027066) ENSLBEG00000027044 ptpn2b (ENSLBEG00000027014) psmg2 (ENSLBEG00000026991) zgc:136493 (ENSLBEG00000026980) ncaldb (ENSLBEG00000026972) grhl2b (ENSLBEG00000026951) znf706 (ENSLBEG00000026905) ENSLBEG00000026899 ENSLBEG00000026866 pabpc1b (ENSLBEG00000026845) LIX1L (ENSLBEG00000026830) sf3b4 (ENSLBEG00000026818) #22 SV2A (ENSLBEG00000026804) #23 ENSLBEG00000026788 ctss1 (ENSLBEG00000026758) lingo4a (ENSLBEG00000026746) vps72a (ENSLBEG00000026731) SYNGAP1 (ENSLBEG00000026710) ENSLBEG00000026694 ENSLBEG00000026684 znf516 (ENSLBEG00000026679) tshz1 (ENSLBEG00000026670) CSMD3 (ENSLBEG00000026598) ENSLBEG00000026564 trps1 (ENSLBEG00000026549) clptm1l (ENSLBEG00000026499) rplp1 (ENSLBEG00000026469) Eupecaria_B ANCESTRAL SPECIES 12 ENSGT00420000029792.qb.b ENSGT00940000154984.A ENSGT00390000008918 ENSGT00940000154697.a.a.a.b ENSGT00940000166830 ENSGT00940000154686.a ENSGT00390000018415 ENSGT00940000162740.k.a ENSGT00940000163010 ENSGT00940000155788.l ENSGT00390000003465.b.b.a ENSGT01090000260040.b.b.a.c.a ENSGT00940000160311.a.b ENSGT00760000119766 ENSGT00390000005869.a ENSGT00870000136537 #22 ENSGT00950000182940.b.a.b.a.b #23 ENSGT00940000155176.o.b ENSGT00940000166429 ENSGT00940000154996.a.a.b ENSGT00390000017503 ENSGT00940000158438.m ENSGT01030000234534.B.a.a.b ENSGT00940000161408 ENSGT00950000183051.a.a.a ENSGT00940000155549.a.a.b ENSGT00940000157893 ENSGT00530000063461.A.b ENSGT00550000074698 ENSGT00940000155113.a.a ENSGT00940000155784.C.u.b Perciformes ANCESTRAL SPECIES 11 ENSGT00420000029792.qb.b ENSGT00940000154984.A ENSGT00390000008918 ENSGT00940000154697.a.a.a.b ENSGT00940000166830 ENSGT00940000154686.a ENSGT00390000018415 ENSGT00940000162740.k.a ENSGT00940000163010 ENSGT00940000155788.l ENSGT00390000003465.b.b.a ENSGT01090000260040.b.b.a.c.a ENSGT00940000160311.a.b ENSGT00760000119766 ENSGT00390000005869.a ENSGT00870000136537 #22 ENSGT00950000182940.b.a.b.a.b #23 ENSGT00940000155176.o.b ENSGT00940000166429 ENSGT00940000154996.a.a.b ENSGT00390000017503 ENSGT00940000158438.m ENSGT01030000234534.B.a.a.b ENSGT00940000161408.f ENSGT00950000183051.a.a.a ENSGT00940000155549.a.a.b ENSGT00940000157893 ENSGT00530000063461.A.b ENSGT00550000074698 ENSGT00940000155113.a.a ENSGT00940000155784.C.u.b Cottioidei ANCESTRAL SPECIES 16 ENSGT00420000029792.qb.b ENSGT00940000154984.A ENSGT00390000008918 ENSGT00940000154697.a.a.a.b ENSGT00940000166830 ENSGT00940000154686.a ENSGT00390000018415 ENSGT00940000162740.k.a ENSGT00940000163010 ENSGT00940000155788.l ENSGT00390000003465.b.b.a ENSGT01090000260040.b.b.a.c.a ENSGT00940000160311.a.b ENSGT00760000119766 ENSGT00390000005869.a ENSGT00870000136537 #22 ENSGT00950000182940.b.a.b.a.b #23 ENSGT00940000155176.o.b ENSGT00940000166429 ENSGT00940000154996.a.a.b ENSGT00390000017503 ENSGT00940000158438.m ENSGT01030000234534.B.a.a.b ENSGT00940000161408.f ENSGT00940000171019 ENSGT00950000183051.a.a.a ENSGT00940000155549.a.a.b ENSGT00940000157893 ENSGT00530000063461.A.b ENSGT00550000074698 ENSGT00940000155113.a.a Lumpfish MODERN SPECIES 2 RIDA (ENSCLMG00005002383) stk3 (ENSCLMG00005002368) polr2k (ENSCLMG00005002367) spag1a (ENSCLMG00005002365) ENSCLMG00005002360 ptpn2b (ENSCLMG00005002359) psmg2 (ENSCLMG00005002356) zgc:136493 (ENSCLMG00005002355) ncaldb (ENSCLMG00005002351) grhl2b (ENSCLMG00005002343) znf706 (ENSCLMG00005002338) ENSCLMG00005002337 pabpc1b (ENSCLMG00005002299) ENSCLMG00005002284 LIX1L (ENSCLMG00005002280) sf3b4 (ENSCLMG00005002278) #22 SV2A (ENSCLMG00005002276) #23 tshz1 (ENSCLMG00005002275) CSMD3 (ENSCLMG00005002265) ENSCLMG00005002260 clptm1l (ENSCLMG00005002245) rplp1 (ENSCLMG00005002236) drc1 (ENSCLMG00005002232) PTK2 (ENSCLMG00005002160) SLC45A4 (ENSCLMG00005002146) GPR20 (ENSCLMG00005002145) cfap20 (ENSCLMG00005002144) dgat1a (ENSCLMG00005002143) zgc:63863 (ENSCLMG00005002142) SCRT1 (ENSCLMG00005002141) ENSCLMG00005002140 Stickleback MODERN SPECIES 9 laptm4b (ENSGACG00000003599) rpl30 (ENSGACG00000003628) RIDA (ENSGACG00000003632) stk3 (ENSGACG00000003645) spag1a (ENSGACG00000003656) ENSGACG00000003662 ptpn2b (ENSGACG00000003666) psmg2 (ENSGACG00000003674) zgc:136493 (ENSGACG00000003682) ncaldb (ENSGACG00000003684) grhl2b (ENSGACG00000003695) ENSGACG00000003700 pabpc1b (ENSGACG00000003771) ENSGACG00000003808 LIX1L (ENSGACG00000003809) sf3b4 (ENSGACG00000003819) #22 SV2A (ENSGACG00000003844) #23 ENSGACG00000003870 ctss1 (ENSGACG00000003898) lingo4a (ENSGACG00000003902) vps72a (ENSGACG00000003903) SYNGAP1 (ENSGACG00000003919) ENSGACG00000003931 ENSGACG00000003932 ENSGACG00000003934 tshz1 (ENSGACG00000003937) CSMD3 (ENSGACG00000003938) ENSGACG00000003969 trps1 (ENSGACG00000003970) clptm1l (ENSGACG00000003981) rplp1 (ENSGACG00000003995) Perciformes_a ANCESTRAL SPECIES 14 ENSGT00420000029792.qb.b ENSGT00940000154984.A ENSGT00390000008918 ENSGT00940000154697.a.a.a.b ENSGT00940000166830 ENSGT00940000154686.a ENSGT00390000018415 ENSGT00940000162740.k.a ENSGT00940000163010 ENSGT00940000155788.l ENSGT00390000003465.b.b.a ENSGT01090000260040.b.b.a.c.a ENSGT00940000160311.a.b ENSGT00760000119766 ENSGT00390000005869.a ENSGT00870000136537 #22 ENSGT00950000182940.b.a.b.a.b #23 ENSGT00940000155176.o.b ENSGT00940000166429 ENSGT00940000154996.a.a.b ENSGT00390000017503 ENSGT00940000158438.m ENSGT01030000234534.B.a.a.b ENSGT00940000161408.f ENSGT00950000183051.a.a.a ENSGT00940000155549.a.a.b ENSGT00940000157893 ENSGT00530000063461.A.b ENSGT00550000074698 ENSGT00940000155113.a.a ENSGT00940000155784.C.u.b Channel bull blenny MODERN SPECIES 2 RIDA (ENSCGOG00000005541) stk3 (ENSCGOG00000005572) spag1a (ENSCGOG00000006240) polr2k (ENSCGOG00000006245) ENSCGOG00000006266 ptpn2b (ENSCGOG00000006448) psmg2 (ENSCGOG00000006614) zgc:136493 (ENSCGOG00000006627) ncaldb (ENSCGOG00000006636) grhl2b (ENSCGOG00000006665) znf706 (ENSCGOG00000006695) ENSCGOG00000006707 pabpc1b (ENSCGOG00000006771) ENSCGOG00000008408 LIX1L (ENSCGOG00000008411) sf3b4 (ENSCGOG00000008421) #22 SV2A (ENSCGOG00000008440) #23 ENSCGOG00000009104 ctss1 (ENSCGOG00000009468) lingo4a (ENSCGOG00000009630) vps72a (ENSCGOG00000009632) SYNGAP1 (ENSCGOG00000009649) RXFP4 (ENSCGOG00000010238) tshz1 (ENSCGOG00000010240) CSMD3 (ENSCGOG00000010256) ENSCGOG00000010544 trps1 (ENSCGOG00000010550) ENSCGOG00000010558 clptm1l (ENSCGOG00000010577) rplp1 (ENSCGOG00000010946) PTK2 (ENSCGOG00000011000) Pike perch MODERN SPECIES 13 RIDA (ENSSLUG00000001931) stk3 (ENSSLUG00000001823) ENSSLUG00000001765 spag1a (ENSSLUG00000001758) ENSSLUG00000001715 ptpn2b (ENSSLUG00000001664) psmg2 (ENSSLUG00000001649) zgc:136493 (ENSSLUG00000001641) ncaldb (ENSSLUG00000001626) grhl2b (ENSSLUG00000001600) znf706 (ENSSLUG00000001578) ENSSLUG00000001565 pabpc1b (ENSSLUG00000001464) ENSSLUG00000001430 LIX1L (ENSSLUG00000001427) sf3b4 (ENSSLUG00000001425) #22 SV2A (ENSSLUG00000001407) #23 ENSSLUG00000001399 ctss1 (ENSSLUG00000001398) lingo4a (ENSSLUG00000001395) vps72a (ENSSLUG00000001392) SYNGAP1 (ENSSLUG00000001383) ENSSLUG00000001380 ENSSLUG00000001375 tshz1 (ENSSLUG00000001373) CSMD3 (ENSSLUG00000001279) trps1 (ENSSLUG00000001242) ENSSLUG00000001237 clptm1l (ENSSLUG00000001221) rplp1 (ENSSLUG00000001213) PTK2 (ENSSLUG00000000917) Eupecaria_C ANCESTRAL SPECIES 13 ENSGT00420000029792.qb.b ENSGT00940000154984.A ENSGT00390000008918 ENSGT00940000154697.a.a.a.b ENSGT00940000166830 ENSGT00940000154686.a ENSGT00390000018415 ENSGT00940000162740.k.a ENSGT00940000163010 ENSGT00940000155788.l ENSGT00390000003465.b.b.a ENSGT01090000260040.b.b.a.c.a ENSGT00940000160311.a.b ENSGT00760000119766 ENSGT00390000005869.a ENSGT00870000136537 #22 ENSGT00950000182940.b.a.b.a.b #23 ENSGT00940000155176.o.b ENSGT00940000166429 ENSGT00940000154996.a.a.b ENSGT00390000017503 ENSGT00940000158438.m ENSGT01030000234534.B.a.a.b ENSGT00940000161408 ENSGT00950000183051.a.a.a ENSGT00940000155549.a.a.b ENSGT00940000157893 ENSGT00530000063461.A.b ENSGT00550000074698 ENSGT00940000155113.a.a ENSGT00940000155784.C.u.b Eupercaria_incertae_sedis ANCESTRAL SPECIES 10 ENSGT00420000029792.qb.b ENSGT00940000154984.A ENSGT00390000008918 ENSGT00940000154697.a.a.a.b ENSGT00940000166830 ENSGT00940000154686.a ENSGT00390000018415 ENSGT00940000162740.k.a ENSGT00940000163010 ENSGT00940000155788.l ENSGT00390000003465.b.b.a ENSGT01090000260040.b.b.a.c.a ENSGT00940000160311.a.b ENSGT00760000119766 ENSGT00390000005869.a ENSGT00870000136537 #22 ENSGT00950000182940.b.a.b.a.b #23 ENSGT00940000155176.o.b ENSGT00940000166429 ENSGT00940000154996.a.a.b ENSGT00390000017503 ENSGT00940000158438.m ENSGT01030000234534.B.a.a.b ENSGT00940000161408 ENSGT00950000183051.a.a.a ENSGT00940000155549.a.a.b ENSGT00940000157893 ENSGT00530000063461.A.b ENSGT00940000155113.a.a ENSGT00940000155784.C.u.b ENSGT00950000182914.a.a.a.c.b European seabass MODERN SPECIES 22 rpl30 (ENSDLAG00005020752) stk3 (ENSDLAG00005020779) ENSDLAG00005020918 ENSDLAG00005034225 ENSDLAG00005002344 ptpn2b (ENSDLAG00005002378) psmg2 (ENSDLAG00005002548) ENSDLAG00005002575 ENSDLAG00005002641 ncaldb (ENSDLAG00005002723) grhl2b (ENSDLAG00005002772) znf706 (ENSDLAG00005026451) ENSDLAG00005002987 pabpc1b (ENSDLAG00005003138) ENSDLAG00005034178 ENSDLAG00005030709 #22 ENSDLAG00005028344 #23 ENSDLAG00005031604 ENSDLAG00005005485 ENSDLAG00005006292 ENSDLAG00005006301 ENSDLAG00005006308 ENSDLAG00005006477 ENSDLAG00005009523 ENSDLAG00005009543 ENSDLAG00005009634 ENSDLAG00005010225 ENSDLAG00005010272 ENSDLAG00005010275 cfap20 (ENSDLAG00005010284) dgat1a (ENSDLAG00005010300) Large yellow croaker MODERN SPECIES 484 ENSLCRG00005008559 trim71 (ENSLCRG00005008552) cckb (ENSLCRG00005008542) ENSLCRG00005008105 ENSLCRG00005008071 zgc:110239 (ENSLCRG00005008050) zgc:136493 (ENSLCRG00005008044) zgc:136493 (ENSLCRG00005008031) ncaldb (ENSLCRG00005008013) grhl2b (ENSLCRG00005007944) ENSLCRG00005007915 ENSLCRG00005007909 pabpc1b (ENSLCRG00005007670) ENSLCRG00005007596 LIX1L (ENSLCRG00005007594) sf3b4 (ENSLCRG00005007593) #22 SV2A (ENSLCRG00005006957) #23 CTSS (ENSLCRG00005006917) ctss1 (ENSLCRG00005006898) lingo4a (ENSLCRG00005006894) vps72a (ENSLCRG00005006882) SYNGAP1 (ENSLCRG00005006430) ENSLCRG00005006389 znf516 (ENSLCRG00005006383) tshz1 (ENSLCRG00005006381) ENSLCRG00005006378 CSMD3 (ENSLCRG00005005650) ENSLCRG00005005355 trps1 (ENSLCRG00005005352) clptm1l (ENSLCRG00005005246) PTK2 (ENSLCRG00005004656) Gilthead seabream MODERN SPECIES 17 stk3 (ENSSAUG00010001936) polr2k (ENSSAUG00010001883) spag1a (ENSSAUG00010001881) ENSSAUG00010001854 ptpn2b (ENSSAUG00010001838) psmg2 (ENSSAUG00010001825) zgc:136493 (ENSSAUG00010001808) ncaldb (ENSSAUG00010001792) grhl2b (ENSSAUG00010001680) znf706 (ENSSAUG00010001636) ENSSAUG00010001626 pabpc1b (ENSSAUG00010001450) ENSSAUG00010001418 ENSSAUG00010001411 LIX1L (ENSSAUG00010001405) sf3b4 (ENSSAUG00010001398) #22 SV2A (ENSSAUG00010001240) #23 ENSSAUG00010017292 ENSSAUG00010017290 vps72a (ENSSAUG00010017287) SYNGAP1 (ENSSAUG00010016670) RXFP4 (ENSSAUG00010016653) znf516 (ENSSAUG00010016652) tshz1 (ENSSAUG00010016651) CSMD3 (ENSSAUG00010016627) trps1 (ENSSAUG00010016602) clptm1l (ENSSAUG00010016589) rplp1 (ENSSAUG00010016580) PTK2 (ENSSAUG00010014341) DENND3 (ENSSAUG00010014304) SLC45A4 (ENSSAUG00010014300) Tetraodontidae ANCESTRAL SPECIES 20 ENSGT00970000196427 ENSGT00940000154984.A ENSGT00940000164643 ENSGT00940000154697.a.a.a.b ENSGT00940000166830 ENSGT00940000154686.a ENSGT00390000018415 ENSGT00940000162740.k.a ENSGT00940000163010 ENSGT00940000155788.l ENSGT00390000003465.b.b.a ENSGT01090000260040.b.b.a.c.a ENSGT00940000160311.a.b ENSGT00760000119766 ENSGT00390000005869.a ENSGT00870000136537 #22 ENSGT00950000182940.b.a.b.a.b #23 ENSGT00940000166429 ENSGT00940000154996.a.a.b ENSGT00940000161408 ENSGT01030000234534.B.a.a.b ENSGT00940000158438.m ENSGT00390000017503 ENSGT01040000240444.B.a ENSGT00950000182914.a.a.a.c.b ENSGT00940000155784.C.u.b ENSGT00940000155113.a.a ENSGT00940000159198.g ENSGT00390000009543 ENSGT00390000003058.b.a.a.a.a ENSGT01030000234787 Tetraodon MODERN SPECIES 15 laptm4b (ENSTNIG00000006749) rpl30 (ENSTNIG00000000339) ENSTNIG00000009143 stk3 (ENSTNIG00000009144) spag1a (ENSTNIG00000009145) ENSTNIG00000009146 ptpn2b (ENSTNIG00000009147) psmg2 (ENSTNIG00000009148) zgc:136493 (ENSTNIG00000009149) ncaldb (ENSTNIG00000009150) grhl2b (ENSTNIG00000009151) ywhaz (ENSTNIG00000009152) pabpc1b (ENSTNIG00000009153) ENSTNIG00000009154 LIX1L (ENSTNIG00000009155) sf3b4 (ENSTNIG00000009156) #22 SV2A (ENSTNIG00000009157) #23 ctss1 (ENSTNIG00000009158) lingo4a (ENSTNIG00000009159) ENSTNIG00000009160 ENSTNIG00000009161 SYNGAP1 (ENSTNIG00000009162) vps72a (ENSTNIG00000009163) GPR20 (ENSTNIG00000009164) SLC45A4 (ENSTNIG00000002435) DENND3 (ENSTNIG00000009165) ENSTNIG00000009166 PTK2 (ENSTNIG00000009167) fam91a1 (ENSTNIG00000009169) spire1a (ENSTNIG00000009170) ENSTNIG00000009171 Fugu MODERN SPECIES 3 spag1a (ENSTRUG00000005775) ENSTRUG00000005820 ptpn2b (ENSTRUG00000030979) psmg2 (ENSTRUG00000006247) zgc:136493 (ENSTRUG00000001813) ENSTRUG00000029658 ENSTRUG00000030633 zgc:136493 (ENSTRUG00000029503) ncaldb (ENSTRUG00000027832) grhl2b (ENSTRUG00000002119) znf706 (ENSTRUG00000026499) ywhaz (ENSTRUG00000003185) pabpc1b (ENSTRUG00000003767) ENSTRUG00000004297 lix1l (ENSTRUG00000004344) sf3b4 (ENSTRUG00000004516) #22 SV2A (ENSTRUG00000004781) #23 ctss1 (ENSTRUG00000005311) lingo4a (ENSTRUG00000005626) ENSTRUG00000028553 ENSTRUG00000027221 SYNGAP1 (ENSTRUG00000005680) vps72a (ENSTRUG00000006093) GPR20 (ENSTRUG00000029161) ENSTRUG00000031981 SLC45A4 (ENSTRUG00000006541) DENND3 (ENSTRUG00000007196) PTK2 (ENSTRUG00000007362) lratd2a (ENSTRUG00000007744) fam91a1 (ENSTRUG00000007769) spire1a (ENSTRUG00000008095) Ovalentaria ANCESTRAL SPECIES 12 ENSGT00420000029792.qb.b ENSGT00940000154984.A ENSGT00390000008918 ENSGT00940000154697.a.a.a.b ENSGT00940000166830 ENSGT00940000154686.a ENSGT00390000018415 ENSGT00940000162740.k.a ENSGT00940000163010 ENSGT00940000155788.l ENSGT00390000003465.b.b.a ENSGT01090000260040.b.b.a.c.a ENSGT00940000160311.a.b ENSGT00760000119766 ENSGT00390000005869.a ENSGT00870000136537 #22 ENSGT00950000182940.b.a.b.a.b #23 ENSGT00940000155176.o.b ENSGT00940000166429 ENSGT00940000154996.a.a.b ENSGT00390000017503 ENSGT00940000158438.m ENSGT01030000234534.B.a.a.b ENSGT00940000161408 ENSGT00950000183051.a.a.a ENSGT00940000155549.a.a.b ENSGT00940000157893 ENSGT00530000063461.A.b ENSGT00550000074698 ENSGT00940000155113.a.a ENSGT00940000155784.C.u.b Atherinomorphae ANCESTRAL SPECIES 12 ENSGT00390000008918 ENSGT00940000154984.A ENSGT00940000164643 ENSGT00940000154697.a.a.a.b ENSGT00940000166830 ENSGT00940000154686.a ENSGT00390000018415 ENSGT00940000162740.k.a ENSGT00940000163010 ENSGT00940000155788.l ENSGT00390000003465.b.b.a ENSGT01090000260040.b.b.a.c.a ENSGT00940000160311.a.b ENSGT00760000119766 ENSGT00390000005869.a ENSGT00870000136537 #22 ENSGT00950000182940.b.a.b.a.b #23 ENSGT00940000155176.o.b ENSGT00940000166429 ENSGT00940000154996.a.a.b ENSGT00390000017503 ENSGT00940000158438.m ENSGT01030000234534.B.a.a.b ENSGT00940000161408 ENSGT00950000183051.a.a.a ENSGT00940000155549.a.a.b ENSGT00940000157893 ENSGT00530000063461.A.b ENSGT00550000074698 ENSGT00940000155113.a.a ENSGT00940000155784.C.u.b Cyprinodontiformes ANCESTRAL SPECIES 10 ENSGT00390000008918 ENSGT00940000154984.A ENSGT00940000164643 ENSGT00940000154697.a.a.a.b ENSGT00940000166830 ENSGT00940000154686.a ENSGT00390000018415 ENSGT00940000162740.k.a ENSGT00940000163010 ENSGT00940000155788.l ENSGT00390000003465.b.b.a ENSGT01090000260040.b.b.a.c.a ENSGT00940000160311.a.b ENSGT00760000119766 ENSGT00390000005869.a ENSGT00870000136537 #22 ENSGT00950000182940.b.a.b.a.b #23 ENSGT00940000155176.o.b ENSGT00940000166429 ENSGT00940000154996.a.a.b ENSGT00390000017503 ENSGT00940000158438.m ENSGT01030000234534.B.a.a.b ENSGT00940000161408 ENSGT00950000183051.a.a.a ENSGT00940000155549.a.a.b ENSGT00940000157893 ENSGT00530000063461.A.b ENSGT00550000074698 ENSGT00940000155113.a.a ENSGT00940000155784.C.u.b Aplocheiloidei ANCESTRAL SPECIES 9 ENSGT00390000012138.a.b.d ENSGT00420000029792.qb.b ENSGT00940000154984.A ENSGT00390000008918 ENSGT00940000154697.a.a.a.b ENSGT00940000166830 ENSGT00940000154686.a ENSGT00390000018415 ENSGT00940000162740.k.a ENSGT00940000163010 ENSGT00940000155788.l ENSGT00390000003465.b.b.a ENSGT01090000260040.b.b.a.c.a ENSGT00940000160311.a.b ENSGT00390000005869.a ENSGT00870000136537 #22 ENSGT00950000182940.b.a.b.a.b #23 ENSGT00940000166429 ENSGT00940000154996.a.a.b ENSGT00390000017503 ENSGT00940000158438.m ENSGT01030000234534.B.a.a.b ENSGT00950000183051.a.a.a ENSGT00940000155549.a.a.b ENSGT00940000157893 ENSGT00530000063461.A.b ENSGT00550000074698 ENSGT00940000155113.a.a ENSGT00940000155784.C.u.b ENSGT00950000182914.a.a.a.c.b ENSGT01040000240444.B.a Mangrove rivulus MODERN SPECIES 2 rpl30 (ENSKMAG00000007612) RIDA (ENSKMAG00000007630) stk3 (ENSKMAG00000007666) polr2k (ENSKMAG00000007731) spag1a (ENSKMAG00000007766) ENSKMAG00000007806 ptpn2b (ENSKMAG00000007835) psmg2 (ENSKMAG00000007877) zgc:136493 (ENSKMAG00000007903) ncaldb (ENSKMAG00000007945) grhl2b (ENSKMAG00000007969) znf706 (ENSKMAG00000007997) ENSKMAG00000008021 pabpc1b (ENSKMAG00000008049) LIX1L (ENSKMAG00000008131) sf3b4 (ENSKMAG00000008154) #22 SV2A (ENSKMAG00000008186) #23 ctss1 (ENSKMAG00000008257) ENSKMAG00000008316 lingo4a (ENSKMAG00000008371) vps72a (ENSKMAG00000008394) SYNGAP1 (ENSKMAG00000008440) ENSKMAG00000008571 tshz1 (ENSKMAG00000008580) CSMD3 (ENSKMAG00000008620) trps1 (ENSKMAG00000008869) clptm1l (ENSKMAG00000008913) rplp1 (ENSKMAG00000008998) PTK2 (ENSKMAG00000009027) DENND3 (ENSKMAG00000009201) SLC45A4 (ENSKMAG00000009242) Turquoise killifish MODERN SPECIES 1628 stk3 (ENSNFUG00015012779) ENSNFUG00015013007 SPAG1A (ENSNFUG00015013020) ENSNFUG00015013026 PTPN2B (ENSNFUG00015013034) ENSNFUG00015013044 ENSNFUG00015013053 ENSNFUG00015013058 Nfu_g_1_004162 (ENSNFUG00015013065) ncaldb (ENSNFUG00015013071) grhl2b (ENSNFUG00015013084) ZNF706 (ENSNFUG00015013116) Nfu_g_1_004152 (ENSNFUG00015013123) pabpc1b (ENSNFUG00015013150) LIX1L (ENSNFUG00015013407) SF3B4 (ENSNFUG00015013419) #22 SV2A (ENSNFUG00015013426) #23 SYNGAP1 (ENSNFUG00015013549) ENSNFUG00015013682 ZNF516 (ENSNFUG00015013698) ENSNFUG00015013713 tshz1 (ENSNFUG00015013716) LAPTM4B (ENSNFUG00015013727) MTDHA (ENSNFUG00015013757) rrm2b (ENSNFUG00015013825) BX927253.1 (ENSNFUG00015014780) BLOC1S4 (ENSNFUG00015014786) pard6gb (ENSNFUG00015014835) ENSNFUG00015014847 JARID2B (ENSNFUG00015014860) dtnbp1b (ENSNFUG00015014904) Cyprinodontoidei ANCESTRAL SPECIES 11 ENSGT00940000154984.A ENSGT00940000164643 ENSGT00390000008918 ENSGT00940000154697.a.a.a.b ENSGT00940000166830 ENSGT00940000154686.a ENSGT00390000018415 ENSGT00940000162740.k.a ENSGT00940000163010 ENSGT00940000155788.l ENSGT00390000003465.b.b.a ENSGT01090000260040.b.b.a.c.a ENSGT00940000160311.a.b ENSGT00760000119766 ENSGT00390000005869.a ENSGT00870000136537 #22 ENSGT00950000182940.b.a.b.a.b #23 ENSGT00940000155176.o.b ENSGT00940000166429 ENSGT00940000154996.a.a.b ENSGT00390000017503 ENSGT00940000158438.m ENSGT01030000234534.B.a.a.b ENSGT00940000161408 ENSGT00950000183051.a.a.a ENSGT00940000155549.a.a.b ENSGT00940000157893 ENSGT00530000063461.A.b ENSGT00550000074698 ENSGT00940000155113.a.a ENSGT00940000155784.C.u.b NAME_4 ANCESTRAL SPECIES 10 ENSGT00420000029792.qb.b ENSGT00940000154984.A ENSGT00390000008918 ENSGT00940000154697.a.a.a.b ENSGT00940000166830 ENSGT00940000154686.a ENSGT00390000018415 ENSGT00940000162740.k.a ENSGT00940000163010 ENSGT00940000155788.l ENSGT00390000003465.b.b.a ENSGT01090000260040.b.b.a.c.a ENSGT00940000160311.a.b ENSGT00760000119766 ENSGT00390000005869.a ENSGT00870000136537 #22 ENSGT00950000182940.b.a.b.a.b #23 ENSGT00940000155176.o.b ENSGT00940000166429 ENSGT00940000154996.a.a.b ENSGT00390000017503 ENSGT00940000158438.m ENSGT01030000234534.B.a.a.b ENSGT00940000161408 ENSGT00950000183051.a.a.a ENSGT00940000155549.a.a.b ENSGT00940000157893 ENSGT00530000063461.A.b ENSGT00550000074698 ENSGT00940000155113.a.a ENSGT00940000155784.C.u.b Mummichog MODERN SPECIES 2348 spag1a (ENSFHEG00000007944) rnf19a (ENSFHEG00000007973) ptpn2b (ENSFHEG00000007995) ENSFHEG00000008030 ncaldb (ENSFHEG00000008044) grhl2b (ENSFHEG00000008089) ENSFHEG00000008103 znf706 (ENSFHEG00000008123) ENSFHEG00000008156 pabpc1b (ENSFHEG00000008186) ENSFHEG00000008168 sf3b4 (ENSFHEG00000008211) #22 SV2A (ENSFHEG00000008239) #23 ENSFHEG00000008248 ctss1 (ENSFHEG00000008270) ENSFHEG00000008289 vps72a (ENSFHEG00000008307) ENSFHEG00000008377 ENSFHEG00000008394 znf516 (ENSFHEG00000008408) tshz1 (ENSFHEG00000008423) CSMD3 (ENSFHEG00000008655) trps1 (ENSFHEG00000008678) clptm1l (ENSFHEG00000008826) rplp1 (ENSFHEG00000008862) PTK2 (ENSFHEG00000009427) DENND3 (ENSFHEG00000000219) Sheepshead minnow MODERN SPECIES 328 polr2k (ENSCVAG00000005198) spag1a (ENSCVAG00000005234) ENSCVAG00000005277 ptpn2b (ENSCVAG00000005292) psmg2 (ENSCVAG00000005300) zgc:136493 (ENSCVAG00000005314) ncaldb (ENSCVAG00000005331) grhl2b (ENSCVAG00000005426) znf706 (ENSCVAG00000005445) ywhaz (ENSCVAG00000000656) pabpc1b (ENSCVAG00000005489) LIX1L (ENSCVAG00000005525) sf3b4 (ENSCVAG00000005536) #22 SV2A (ENSCVAG00000005585) #23 ENSCVAG00000000173 ctss1 (ENSCVAG00000006060) lingo4a (ENSCVAG00000006067) vps72a (ENSCVAG00000006086) SYNGAP1 (ENSCVAG00000006316) ENSCVAG00000006336 znf516 (ENSCVAG00000006343) tshz1 (ENSCVAG00000006346) CSMD3 (ENSCVAG00000006492) Poeciliinae ANCESTRAL SPECIES 18 ENSGT00420000029792.qb.b ENSGT00940000154984.A ENSGT00940000164643 ENSGT00940000154697.a.a.a.b ENSGT00940000166830 ENSGT00940000154686.a ENSGT00390000018415 ENSGT00940000162740.k.a ENSGT00940000163010 ENSGT00940000155788.l ENSGT00390000003465.b.b.a ENSGT01090000260040.b.b.a.c.a ENSGT00940000160311.a.b ENSGT00760000119766 ENSGT00390000005869.a ENSGT00870000136537 #22 ENSGT00950000182940.b.a.b.a.b #23 ENSGT00940000155176.o.b ENSGT00940000166429 ENSGT00940000154996.a.a.b ENSGT00390000017503 ENSGT00940000158438.m ENSGT01030000234534.B.a.a.b ENSGT00940000161408 ENSGT00950000183051.a.a.a ENSGT00940000155549.a.a.b ENSGT00940000157893 ENSGT00530000063461.A.b ENSGT00550000074698 ENSGT00940000155113.a.a ENSGT00940000155784.C.u.b Poecilia ANCESTRAL SPECIES 24 ENSGT00420000029792.qb.b ENSGT00940000154984.A ENSGT00940000164643 ENSGT00940000154697.a.a.a.b ENSGT00940000166830 ENSGT00940000154686.a ENSGT00390000018415 ENSGT00940000162740.k.a ENSGT00940000163010 ENSGT00940000155788.l ENSGT00390000003465.b.b.a ENSGT01090000260040.b.b.a.c.a ENSGT00940000160311.a.b ENSGT00760000119766 ENSGT00390000005869.a ENSGT00870000136537 #22 ENSGT00950000182940.b.a.b.a.b #23 ENSGT00940000166429 ENSGT00940000154996.a.a.b ENSGT00390000017503 ENSGT00940000158438.m ENSGT01030000234534.B.a.a.b ENSGT00940000161408 ENSGT00950000183051.a.a.a ENSGT00940000155549.a.a.b ENSGT00940000157893 ENSGT00530000063461.A.b ENSGT00550000074698 ENSGT00940000155113.a.a ENSGT00940000155784.C.u.b ENSGT00950000182914.a.a.a.c.b Guppy MODERN SPECIES 441 RIDA (ENSPREG00000008630) stk3 (ENSPREG00000008642) spag1a (ENSPREG00000008672) ENSPREG00000008685 ENSPREG00000008708 ptpn2b (ENSPREG00000008740) psmg2 (ENSPREG00000008805) zgc:136493 (ENSPREG00000008908) ncaldb (ENSPREG00000008920) grhl2b (ENSPREG00000008946) znf706 (ENSPREG00000009035) ENSPREG00000009309 pabpc1b (ENSPREG00000010911) ENSPREG00000010984 lix1l (ENSPREG00000011018) sf3b4 (ENSPREG00000011076) #22 SV2A (ENSPREG00000011109) #23 ctss1 (ENSPREG00000011168) lingo4a (ENSPREG00000011184) vps72a (ENSPREG00000011189) SYNGAP1 (ENSPREG00000011216) ENSPREG00000011286 znf516 (ENSPREG00000011296) tshz1 (ENSPREG00000011305) CSMD3 (ENSPREG00000011344) trps1 (ENSPREG00000011468) clptm1l (ENSPREG00000011507) rplp1 (ENSPREG00000011579) PTK2 (ENSPREG00000011683) DENND3 (ENSPREG00000011896) SLC45A4 (ENSPREG00000011989) NAME_6 ANCESTRAL SPECIES 277 ENSGT00940000162740.k.a ENSGT00940000163010 ENSGT00940000155788.l ENSGT00390000003465.b.b.a ENSGT01090000260040.b.b.a.c.a ENSGT00940000160311.a.b ENSGT00760000119766 ENSGT00390000005869.a ENSGT00870000136537 #22 ENSGT00950000182940.b.a.b.a.b #23 ENSGT00940000166429 ENSGT00940000154996.a.a.b ENSGT00390000017503 ENSGT00940000158438.m ENSGT01030000234534.B.a.a.b ENSGT00940000171019 ENSGT00950000183051.a.a.a ENSGT00940000155549.a.a.b Sailfin molly MODERN SPECIES 1266 zgc:136493 (ENSPLAG00000001356) ncaldb (ENSPLAG00000001366) grhl2b (ENSPLAG00000001373) znf706 (ENSPLAG00000001378) ENSPLAG00000000020 pabpc1b (ENSPLAG00000001388) ENSPLAG00000001393 LIX1L (ENSPLAG00000001397) sf3b4 (ENSPLAG00000001401) #22 ENSPLAG00000001403 Amazon molly MODERN SPECIES 536 zgc:136493 (ENSPFOG00000006448) ncaldb (ENSPFOG00000006410) grhl2b (ENSPFOG00000006095) znf706 (ENSPFOG00000006058) ENSPFOG00000006021 pabpc1b (ENSPFOG00000005917) ENSPFOG00000005894 LIX1L (ENSPFOG00000005818) sf3b4 (ENSPFOG00000005754) #22 SV2A (ENSPFOG00000005638) #23 ENSPFOG00000021838 #23 ctss1 (ENSPFOG00000005583) lingo4a (ENSPFOG00000020352) vps72a (ENSPFOG00000005541) SYNGAP1 (ENSPFOG00000005041) ENSPFOG00000020351 ENSPFOG00000004994 ENSPFOG00000021970 tshz1 (ENSPFOG00000004940) tshz1 (ENSPFOG00000021989) CSMD3 (ENSPFOG00000002171) Platyfish MODERN SPECIES 4 RIDA (ENSXMAG00000003693) stk3 (ENSXMAG00000023479) ENSXMAG00000003702 spag1a (ENSXMAG00000003703) ENSXMAG00000003706 ptpn2b (ENSXMAG00000021556) psmg2 (ENSXMAG00000005350) zgc:136493 (ENSXMAG00000003720) ENSXMAG00000019789 ncaldb (ENSXMAG00000003721) grhl2b (ENSXMAG00000003725) znf706 (ENSXMAG00000027213) pabpc1b (ENSXMAG00000003753) ENSXMAG00000003767 LIX1L (ENSXMAG00000003769) sf3b4 (ENSXMAG00000003772) #22 SV2A (ENSXMAG00000003782) #23 ENSXMAG00000003793 ctss1 (ENSXMAG00000003801) lingo4a (ENSXMAG00000020336) vps72a (ENSXMAG00000003802) SYNGAP1 (ENSXMAG00000003807) ENSXMAG00000015639 znf516 (ENSXMAG00000028251) tshz1 (ENSXMAG00000023230) CSMD3 (ENSXMAG00000015566) trps1 (ENSXMAG00000015559) clptm1l (ENSXMAG00000015553) rplp1 (ENSXMAG00000015532) PTK2 (ENSXMAG00000015476) DENND3 (ENSXMAG00000015472) Oryzias ANCESTRAL SPECIES 22 ENSGT00390000012138.a.b.d ENSGT00420000029792.qb.b ENSGT00940000154984.A ENSGT00940000164643 ENSGT00940000154697.a.a.a.b ENSGT00940000166830 ENSGT00940000154686.a ENSGT00390000018415 ENSGT00940000162740.k.a ENSGT00940000163010 ENSGT00940000155788.l ENSGT00390000003465.b.b.a ENSGT01090000260040.b.b.a.c.a ENSGT00940000160311.a.b ENSGT00390000005869.a ENSGT00870000136537 #22 ENSGT00950000182940.b.a.b.a.b #23 ENSGT00940000155176.o.b ENSGT00940000166429 ENSGT00940000154996.a.a.b ENSGT00390000017503 ENSGT00940000158438.m ENSGT01030000234534.B.a.a.b ENSGT00940000161408 ENSGT00950000183051.a.a.a ENSGT00940000155549.a.a.b ENSGT00940000157893 ENSGT00940000155994 ENSGT00940000162490 ENSGT00390000013383 ENSGT00940000163607 Oryzias_b ANCESTRAL SPECIES 22 ENSGT00390000012138.a.b.d ENSGT00420000029792.qb.b ENSGT00940000154984.A ENSGT00940000164643 ENSGT00940000154697.a.a.a.b ENSGT00940000166830 ENSGT00940000154686.a ENSGT00390000018415 ENSGT00940000162740.k.a ENSGT00940000163010 ENSGT00940000155788.l ENSGT00390000003465.b.b.a ENSGT01090000260040.b.b.a.c.a ENSGT00940000160311.a.b ENSGT00390000005869.a ENSGT00870000136537 #22 ENSGT00950000182940.b.a.b.a.b #23 ENSGT00940000155176.o.b ENSGT00940000166429 ENSGT00940000154996.a.a.b ENSGT00390000017503 ENSGT00940000158438.m ENSGT01030000234534.B.a.a.b ENSGT00940000161408 ENSGT00950000183051.a.a.a ENSGT00940000155549.a.a.b ENSGT00940000157893 ENSGT00940000155994 ENSGT00940000162490 ENSGT00390000013383 ENSGT00940000163607 Javanese ricefish MODERN SPECIES 2 rpl30 (ENSOJAG00000022531) RIDA (ENSOJAG00000022522) stk3 (ENSOJAG00000022419) ENSOJAG00000022392 spag1a (ENSOJAG00000022380) ENSOJAG00000022342 ptpn2b (ENSOJAG00000022324) psmg2 (ENSOJAG00000022313) zgc:136493 (ENSOJAG00000022293) ncaldb (ENSOJAG00000022273) grhl2b (ENSOJAG00000022240) znf706 (ENSOJAG00000022227) ENSOJAG00000022218 pabpc1b (ENSOJAG00000022120) LIX1L (ENSOJAG00000022091) sf3b4 (ENSOJAG00000022079) #22 SV2A (ENSOJAG00000021863) #23 ctss1 (ENSOJAG00000021818) lingo4a (ENSOJAG00000021809) vps72a (ENSOJAG00000021799) SYNGAP1 (ENSOJAG00000021762) ENSOJAG00000021754 znf516 (ENSOJAG00000021746) tshz1 (ENSOJAG00000021736) CSMD3 (ENSOJAG00000020226) ENSOJAG00000019972 ENSOJAG00000019946 trps1 (ENSOJAG00000019935) elmo1 (ENSOJAG00000019568) rp9 (ENSOJAG00000019487) si:dkey-184p18.2 (ENSOJAG00000019477) Indian medaka MODERN SPECIES 3 rpl30 (ENSOMEG00000013178) RIDA (ENSOMEG00000013208) stk3 (ENSOMEG00000013242) ENSOMEG00000013273 spag1a (ENSOMEG00000013293) ENSOMEG00000013313 ptpn2b (ENSOMEG00000013364) psmg2 (ENSOMEG00000013383) zgc:136493 (ENSOMEG00000013424) ncaldb (ENSOMEG00000013460) grhl2b (ENSOMEG00000013529) znf706 (ENSOMEG00000013549) ENSOMEG00000013565 pabpc1b (ENSOMEG00000013627) LIX1L (ENSOMEG00000013675) sf3b4 (ENSOMEG00000013694) #22 SV2A (ENSOMEG00000013830) #23 CTSS (ENSOMEG00000013876) ctss1 (ENSOMEG00000013902) lingo4a (ENSOMEG00000013969) vps72a (ENSOMEG00000014002) SYNGAP1 (ENSOMEG00000014068) ENSOMEG00000014090 znf516 (ENSOMEG00000014103) tshz1 (ENSOMEG00000014146) CSMD3 (ENSOMEG00000000942) trps1 (ENSOMEG00000014343) ENSOMEG00000014354 elmo1 (ENSOMEG00000014438) rp9 (ENSOMEG00000014485) si:dkey-184p18.2 (ENSOMEG00000014504) Oryzias_a ANCESTRAL SPECIES 30 ENSGT00940000164643 ENSGT00940000154697.a.a.a.b ENSGT00940000166830 ENSGT00940000154686.a ENSGT00390000018415 ENSGT00940000162740.k.a ENSGT00940000163010 ENSGT00940000155788.l ENSGT00390000003465.b.b.a ENSGT01090000260040.b.b.a.c.a ENSGT00940000160311.a.b ENSGT00390000005869.a ENSGT00870000136537 #22 ENSGT00950000182940.b.a.b.a.b #23 ENSGT00940000155176.o.b ENSGT00940000166429 ENSGT00940000154996.a.a.b ENSGT00390000017503 ENSGT00940000158438.m ENSGT01030000234534.B.a.a.b ENSGT00940000161408 ENSGT00950000183051.a.a.a ENSGT00940000155549.a.a.b ENSGT00940000157893 ENSGT00940000155994 ENSGT00940000162490 ENSGT00390000013383 ENSGT00940000163607 Chinese medaka MODERN SPECIES 46 ENSOSIG00000016871 spag1a (ENSOSIG00000016876) ENSOSIG00000016880 ptpn2b (ENSOSIG00000016885) psmg2 (ENSOSIG00000016886) zgc:136493 (ENSOSIG00000016887) ncaldb (ENSOSIG00000016888) grhl2b (ENSOSIG00000016903) znf706 (ENSOSIG00000017086) ENSOSIG00000017089 pabpc1b (ENSOSIG00000017137) ctss1 (ENSOSIG00000019050) LIX1L (ENSOSIG00000019055) sf3b4 (ENSOSIG00000019059) #22 SV2A (ENSOSIG00000019085) #23 CTSS (ENSOSIG00000019185) lingo4a (ENSOSIG00000019186) vps72a (ENSOSIG00000019189) SYNGAP1 (ENSOSIG00000019202) ENSOSIG00000019209 ENSOSIG00000019213 tshz1 (ENSOSIG00000019215) CSMD3 (ENSOSIG00000019404) Japanese Medaka HdrR MODERN SPECIES 2 ENSORLG00000028125 ENSORLG00000002783 spag1a (ENSORLG00000002796) ENSORLG00000002803 ptpn2b (ENSORLG00000002826) psmg2 (ENSORLG00000002843) zgc:136493 (ENSORLG00000002851) ncaldb (ENSORLG00000002859) grhl2b (ENSORLG00000002909) ENSORLG00000023676 znf706 (ENSORLG00000002918) ENSORLG00000027312 pabpc1b (ENSORLG00000003008) ENSORLG00000022703 LIX1L (ENSORLG00000003036) sf3b4 (ENSORLG00000003062) #22 ENSORLG00000003092 #23 ctss (ENSORLG00000003145) ctss1 (ENSORLG00000029787) ENSORLG00000003156 ENSORLG00000026314 vps72a (ENSORLG00000003174) ENSORLG00000003202 ENSORLG00000003213 znf516 (ENSORLG00000023821) ENSORLG00000003228 CSMD3 (ENSORLG00000003251) trps1 (ENSORLG00000003272) ENSORLG00000023853 elmo1 (ENSORLG00000003371) rp9 (ENSORLG00000003381) Ovalentaria_B ANCESTRAL SPECIES 15 ENSGT00420000029792.qb.b ENSGT00940000154984.A ENSGT00390000008918 ENSGT00940000154697.a.a.a.b ENSGT00940000166830 ENSGT00940000154686.a ENSGT00390000018415 ENSGT00940000162740.k.a ENSGT00940000163010 ENSGT00940000155788.l ENSGT00390000003465.b.b.a ENSGT01090000260040.b.b.a.c.a ENSGT00940000160311.a.b ENSGT00760000119766 ENSGT00390000005869.a ENSGT00870000136537 #22 ENSGT00950000182940.b.a.b.a.b #23 ENSGT00940000155176.o.b ENSGT00940000166429 ENSGT00940000154996.a.a.b ENSGT00390000017503 ENSGT00940000158438.m ENSGT01030000234534.B.a.a.b ENSGT00940000161408 ENSGT00950000183051.a.a.a ENSGT00940000155549.a.a.b ENSGT00940000157893 ENSGT00530000063461.A.b ENSGT00550000074698 ENSGT00940000155113.a.a ENSGT00940000155784.C.u.b Pomacentridae ANCESTRAL SPECIES 7 ENSGT00420000029792.qb.b ENSGT00940000154984.A ENSGT00390000008918 ENSGT00940000154697.a.a.a.b ENSGT00940000166830 ENSGT00940000154686.a ENSGT00390000018415 ENSGT00940000162740.k.a ENSGT00940000163010 ENSGT00940000155788.l.d ENSGT00390000003465.b.b.a ENSGT01090000260061.c.a.d.b.b ENSGT00940000160311.a.b ENSGT00760000119766 ENSGT00390000005869.a ENSGT00870000136537 #22 ENSGT00950000182940.b.a.b.a.b #23 ENSGT00940000155176.o.b ENSGT00940000166429 ENSGT00940000154996.a.a.b ENSGT00390000017503 ENSGT00940000158438.m ENSGT01030000234534.B.a.a.b ENSGT00940000161408 ENSGT00950000183051.a.a.a ENSGT00940000155549.a.a.b ENSGT00940000157893 ENSGT00530000063461.A.b ENSGT00550000074698 ENSGT00940000155113.a.a ENSGT00940000155784.C.u.b Pomacentridae_A ANCESTRAL SPECIES 6 ENSGT00420000029792.qb.b ENSGT00940000154984.A ENSGT00390000008918 ENSGT00940000154697.a.a.a.b ENSGT00940000166830 ENSGT00940000154686.a ENSGT00390000018415 ENSGT00940000162740.k.a ENSGT00940000163010 ENSGT00940000155788.l.d ENSGT00390000003465.b.b.a ENSGT01090000260061.c.a.d.b.b ENSGT00940000160311.a.b ENSGT00760000119766 ENSGT00390000005869.a ENSGT00870000136537 #22 ENSGT00950000182940.b.a.b.a.b #23 ENSGT00940000155176.o.b ENSGT00940000166429 ENSGT00940000154996.a.a.b ENSGT00390000017503 ENSGT00940000158438.m ENSGT01030000234534.B.a.a.b ENSGT00940000160839 ENSGT00950000183051.a.a.b ENSGT00920000149172 ENSGT00940000156446 ENSGT00390000010337.B.a.b ENSGT00950000182893.a.a.a.b.c ENSGT00530000063156.b ENSGT00940000153859.b Amphiprion ANCESTRAL SPECIES 16 ENSGT00420000029792.qb.b ENSGT00940000154984.A ENSGT00390000008918 ENSGT00940000154697.a.a.a.b ENSGT00940000166830 ENSGT00940000154686.a ENSGT00390000018415 ENSGT00940000162740.k.a ENSGT00940000163010 ENSGT00940000155788.l.d ENSGT00390000003465.b.b.a ENSGT01090000260061.c.a.d.b.b ENSGT00940000160311.a.b ENSGT00760000119766 ENSGT00390000005869.a ENSGT00870000136537 #22 ENSGT00950000182940.b.a.b.a.b #23 ENSGT00940000155176.o.b ENSGT00940000166429 ENSGT00940000154996.a.a.b ENSGT00390000017503 ENSGT00940000158438.m Orange clownfish MODERN SPECIES 8 RIDA (ENSAPEG00000010862) stk3 (ENSAPEG00000010839) polr2k (ENSAPEG00000010759) spag1a (ENSAPEG00000010726) ENSAPEG00000010715 ptpn2b (ENSAPEG00000010643) psmg2 (ENSAPEG00000010617) zgc:136493 (ENSAPEG00000010593) ncaldb (ENSAPEG00000010579) grhl2b (ENSAPEG00000010506) znf706 (ENSAPEG00000010491) ENSAPEG00000010463 pabpc1b (ENSAPEG00000010435) ENSAPEG00000010423 LIX1L (ENSAPEG00000010375) sf3b4 (ENSAPEG00000010365) #22 SV2A (ENSAPEG00000010319) #23 ENSAPEG00000010276 ENSAPEG00000010237 ENSAPEG00000010202 lingo4a (ENSAPEG00000010193) vps72a (ENSAPEG00000010172) SYNGAP1 (ENSAPEG00000010131) cratb (ENSAPEG00000010108) ppt2b (ENSAPEG00000010100) rps5 (ENSAPEG00000010045) ppt2b (ENSAPEG00000010036) cratb (ENSAPEG00000009940) ENSAPEG00000009909 nrm (ENSAPEG00000009879) ENSAPEG00000009856 Clown anemonefish MODERN SPECIES 1459 grhl2b (ENSAOCG00000019914) znf706 (ENSAOCG00000001470) ENSAOCG00000019854 pabpc1b (ENSAOCG00000019839) ENSAOCG00000019820 LIX1L (ENSAOCG00000001459) sf3b4 (ENSAOCG00000019801) #22 SV2A (ENSAOCG00000002686) #23 ENSAOCG00000019750 ENSAOCG00000019723 ENSAOCG00000019713 PCGF2 (ENSAOCG00000019708) PIP4K2B (ENSAOCG00000019691) psmb3 (ENSAOCG00000019661) scrn2 (ENSAOCG00000019626) ENSAOCG00000019605 ENSAOCG00000019588 sp6 (ENSAOCG00000019578) PLA2G12B (ENSAOCG00000019569) ENSAOCG00000019547 ENSAOCG00000019520 QPRT (ENSAOCG00000019407) Spiny chromis MODERN SPECIES 3 rpl30 (ENSAPOG00000018285) RIDA (ENSAPOG00000018254) stk3 (ENSAPOG00000018229) spag1a (ENSAPOG00000018176) ENSAPOG00000000495 ENSAPOG00000018041 ptpn2b (ENSAPOG00000018010) zgc:136493 (ENSAPOG00000017972) ncaldb (ENSAPOG00000017954) grhl2b (ENSAPOG00000017933) znf706 (ENSAPOG00000017809) ENSAPOG00000017801 pabpc1b (ENSAPOG00000017776) ENSAPOG00000017690 LIX1L (ENSAPOG00000000475) sf3b4 (ENSAPOG00000017647) #22 SV2A (ENSAPOG00000017639) #23 CTSS (ENSAPOG00000017560) ENSAPOG00000017388 lingo4a (ENSAPOG00000017358) vps72a (ENSAPOG00000017347) SYNGAP1 (ENSAPOG00000017311) ENSAPOG00000017254 ENSAPOG00000017243 tshz1 (ENSAPOG00000017234) CSMD3 (ENSAPOG00000017193) trps1 (ENSAPOG00000016785) Bicolor damselfish MODERN SPECIES 270 RIDA (ENSSPAG00000019562) ENSSPAG00000019554 stk3 (ENSSPAG00000019513) spag1a (ENSSPAG00000019495) ENSSPAG00000019460 ptpn2b (ENSSPAG00000019443) psmg2 (ENSSPAG00000019435) zgc:136493 (ENSSPAG00000019423) ncaldb (ENSSPAG00000019414) grhl2b (ENSSPAG00000019357) znf706 (ENSSPAG00000019343) ENSSPAG00000019330 pabpc1b (ENSSPAG00000019265) ENSSPAG00000019238 LIX1L (ENSSPAG00000019225) sf3b4 (ENSSPAG00000019219) #22 SV2A (ENSSPAG00000019190) #23 CTSS (ENSSPAG00000019023) ctss1 (ENSSPAG00000018989) lingo4a (ENSSPAG00000018979) vps72a (ENSSPAG00000018964) ENSSPAG00000018927 Cichlidae ANCESTRAL SPECIES 7 ENSGT00420000029792.qb.b ENSGT00940000154984.A ENSGT00390000008918 ENSGT00940000154697.a.a.a.b ENSGT00940000166830 ENSGT00940000154686.a ENSGT00390000018415 ENSGT00940000162740.k.a ENSGT00940000163010 ENSGT00940000155788.l ENSGT00390000003465.b.b.a ENSGT01090000260040.b.b.a.c.a ENSGT00940000160311.a.b ENSGT00760000119766 ENSGT00390000005869.a ENSGT00870000136537 #22 ENSGT00950000182940.b.a.b.a.b #23 ENSGT00940000155176.o.b ENSGT00940000166429 ENSGT00940000154996.a.a.b ENSGT00390000017503 ENSGT00940000158438.m ENSGT01030000234534.B.a.a.b ENSGT00940000161408 ENSGT00950000183051.a.a.a ENSGT00940000155549.a.a.b ENSGT00940000157893 ENSGT00530000063461.A.b ENSGT00550000074698 ENSGT00940000155113.a.a ENSGT00940000155784.C.u.b Pseudocrenilabrinae ANCESTRAL SPECIES 12 ENSGT00420000029792.qb.b ENSGT00940000154984.A ENSGT00390000008918 ENSGT00940000154697.a.a.a.b ENSGT00940000166830 ENSGT00940000154686.a ENSGT00390000018415 ENSGT00940000162740.k.a ENSGT00940000163010 ENSGT00940000155788.l ENSGT00390000003465.b.b.a ENSGT01090000260040.b.b.a.c.a ENSGT00940000160311.a.b ENSGT00760000119766 ENSGT00390000005869.a ENSGT00870000136537 #22 ENSGT00950000182940.b.a.b.a.b #23 ENSGT00940000155176.o.b ENSGT00940000166429 ENSGT00940000154996.a.a.b ENSGT00390000017503 ENSGT00940000158438.m ENSGT01030000234534.B.a.a.b ENSGT00940000161408 ENSGT00950000183051.a.a.a ENSGT00940000155549.a.a.b ENSGT00940000157893 ENSGT00530000063461.A.b ENSGT00550000074698 ENSGT00940000155113.a.a ENSGT00940000155784.C.u.b Nile tilapia MODERN SPECIES 13 RIDA (ENSONIG00000002675) stk3 (ENSONIG00000002677) polr2k (ENSONIG00000037544) spag1a (ENSONIG00000002685) ENSONIG00000002691 ptpn2b (ENSONIG00000002696) psmg2 (ENSONIG00000027779) zgc:136493 (ENSONIG00000002701) ncaldb (ENSONIG00000030143) grhl2b (ENSONIG00000002710) znf706 (ENSONIG00000040105) ENSONIG00000002711 pabpc1b (ENSONIG00000002717) ENSONIG00000038825 LIX1L (ENSONIG00000002728) sf3b4 (ENSONIG00000002730) #22 SV2A (ENSONIG00000002737) #23 ENSONIG00000002754 lingo4a (ENSONIG00000020850) vps72a (ENSONIG00000002771) ENSONIG00000002770 SYNGAP1 (ENSONIG00000002773) ENSONIG00000020851 znf516 (ENSONIG00000030464) tshz1 (ENSONIG00000002775) CSMD3 (ENSONIG00000002776) trps1 (ENSONIG00000038056) clptm1l (ENSONIG00000002800) rplp1 (ENSONIG00000002814) PTK2 (ENSONIG00000002815) DENND3 (ENSONIG00000002833) Pseudocrenilabrinae_A ANCESTRAL SPECIES 9 ENSGT00420000029792.qb.b ENSGT00940000154984.A ENSGT00390000008918 ENSGT00940000154697.a.a.a.b ENSGT00940000166830 ENSGT00940000154686.a ENSGT00390000018415 ENSGT00940000162740.k.a ENSGT00940000163010 ENSGT00940000155788.l ENSGT00390000003465.b.b.a ENSGT01090000260040.b.b.a.c.a ENSGT00940000160311.a.b ENSGT00760000119766 ENSGT00390000005869.a ENSGT00870000136537 #22 ENSGT00950000182940.b.a.b.a.b #23 ENSGT00940000155176.o.b ENSGT00940000166429 ENSGT00940000154996.a.a.b ENSGT00390000017503 ENSGT00940000158438.m ENSGT01030000234534.B.a.a.b ENSGT00940000161408 ENSGT00950000183051.a.a.a ENSGT00940000155549.a.a.b ENSGT00940000157893 ENSGT00530000063461.A.b ENSGT00550000074698 ENSGT00940000155113.a.a ENSGT00940000155784.C.u.b Haplochromini ANCESTRAL SPECIES 5 ENSGT00420000029792.qb.b ENSGT00940000154984.A ENSGT00390000008918 ENSGT00940000154697.a.a.a.b ENSGT00940000166830 ENSGT00940000154686.a ENSGT00390000018415 ENSGT00940000162740.k.a ENSGT00940000163010 ENSGT00940000155788.l ENSGT00390000003465.b.b.a ENSGT01090000260040.b.b.a.c.a ENSGT00940000160311.a.b ENSGT00760000119766 ENSGT00390000005869.a ENSGT00870000136537 #22 ENSGT00950000182940.b.a.b.a.b #23 ENSGT00940000155176.o.b ENSGT00940000166429 ENSGT00940000154996.a.a.b ENSGT00390000017503 ENSGT00940000158438.m ENSGT01030000234534.B.a.a.b ENSGT00940000161408 ENSGT00950000183051.a.a.a ENSGT00940000155549.a.a.b ENSGT00940000157893 ENSGT00530000063461.A.b ENSGT00550000074698 ENSGT00940000155113.a.a ENSGT00940000155784.C.u.b Burton s mouthbrooder MODERN SPECIES 288 RIDA (ENSHBUG00000002322) stk3 (ENSHBUG00000002291) polr2k (ENSHBUG00000002269) spag1a (ENSHBUG00000002255) ENSHBUG00000002227 ptpn2b (ENSHBUG00000002197) psmg2 (ENSHBUG00000002180) zgc:136493 (ENSHBUG00000002167) ncaldb (ENSHBUG00000000858) grhl2b (ENSHBUG00000002143) znf706 (ENSHBUG00000002106) ENSHBUG00000002099 pabpc1b (ENSHBUG00000002075) ENSHBUG00000002044 LIX1L (ENSHBUG00000000954) sf3b4 (ENSHBUG00000002028) #22 SV2A (ENSHBUG00000002013) #23 ENSHBUG00000001992 ENSHBUG00000001976 lingo4a (ENSHBUG00000001961) vps72a (ENSHBUG00000001951) ENSHBUG00000001931 ENSHBUG00000001913 znf516 (ENSHBUG00000001908) tshz1 (ENSHBUG00000023837) CSMD3 (ENSHBUG00000023828) trps1 (ENSHBUG00000023601) clptm1l (ENSHBUG00000023587) rplp1 (ENSHBUG00000023496) PTK2 (ENSHBUG00000023488) Haplochromini_A ANCESTRAL SPECIES 5 ENSGT00420000029792.qb.b ENSGT00940000154984.A ENSGT00390000008918 ENSGT00940000154697.a.a.a.b ENSGT00940000166830 ENSGT00940000154686.a ENSGT00390000018415 ENSGT00940000162740.k.a ENSGT00940000163010 ENSGT00940000155788.l ENSGT00390000003465.b.b.a ENSGT01090000260040.b.b.a.c.a ENSGT00940000160311.a.b ENSGT00760000119766 ENSGT00390000005869.a ENSGT00870000136537 #22 ENSGT00950000182940.b.a.b.a.b #23 ENSGT00940000155176.o.b ENSGT00940000166429 ENSGT00940000154996.a.a.b ENSGT00390000017503 ENSGT00940000158438.m ENSGT01030000234534.B.a.a.b ENSGT00940000161408 ENSGT00950000183051.a.a.a ENSGT00940000155549.a.a.b ENSGT00940000157893 ENSGT00530000063461.A.b ENSGT00550000074698 ENSGT00940000155113.a.a ENSGT00940000155784.C.u.b P. nyererei MODERN SPECIES 323 RIDA (ENSPNYG00000012172) stk3 (ENSPNYG00000012195) polr2k (ENSPNYG00000012241) spag1a (ENSPNYG00000012272) ENSPNYG00000012356 ptpn2b (ENSPNYG00000012392) psmg2 (ENSPNYG00000012431) zgc:136493 (ENSPNYG00000012462) ncaldb (ENSPNYG00000012485) grhl2b (ENSPNYG00000012499) znf706 (ENSPNYG00000012537) ENSPNYG00000012548 pabpc1b (ENSPNYG00000012578) ENSPNYG00000012653 LIX1L (ENSPNYG00000012677) sf3b4 (ENSPNYG00000012700) #22 SV2A (ENSPNYG00000012723) #23 ENSPNYG00000012762 ENSPNYG00000012786 ENSPNYG00000012824 vps72a (ENSPNYG00000012841) SYNGAP1 (ENSPNYG00000012872) ENSPNYG00000012965 znf516 (ENSPNYG00000012972) tshz1 (ENSPNYG00000012989) CSMD3 (ENSPNYG00000013030) ENSPNYG00000013159 ENSPNYG00000013173 clptm1l (ENSPNYG00000013208) rplp1 (ENSPNYG00000013249) ENSPNYG00000013260 Haplochromini_B ANCESTRAL SPECIES 1 ENSGT00420000029792.qb.b ENSGT00940000154984.A ENSGT00390000008918 ENSGT00940000154697.a.a.a.b ENSGT00940000166830 ENSGT00940000154686.a ENSGT00390000018415 ENSGT00940000162740.k.a ENSGT00940000163010 ENSGT00940000155788.l ENSGT00390000003465.b.b.a ENSGT01090000260040.b.b.a.c.a ENSGT00940000160311.a.b ENSGT00760000119766 ENSGT00390000005869.a ENSGT00870000136537 #22 ENSGT00950000182940.b.a.b.a.b #23 ENSGT00940000155176.o.b ENSGT00940000166429 ENSGT00940000154996.a.a.b ENSGT00390000017503 ENSGT00940000158438.m ENSGT00940000161408 ENSGT00950000183051.a.a.a ENSGT00940000155549.a.a.b ENSGT00940000157893 ENSGT00530000063461.A.b ENSGT00550000074698 ENSGT00940000155113.a.a ENSGT00940000155784.C.u.b ENSGT00950000182914.a.a.a.c.b Zebra mbuna MODERN SPECIES 1104 RIDA (ENSMZEG00005003305) stk3 (ENSMZEG00005003256) polr2k (ENSMZEG00005003220) spag1a (ENSMZEG00005003070) ENSMZEG00005003061 ptpn2b (ENSMZEG00005003006) psmg2 (ENSMZEG00005002969) zgc:136493 (ENSMZEG00005002953) ncaldb (ENSMZEG00005002945) grhl2b (ENSMZEG00005002889) znf706 (ENSMZEG00005002874) ENSMZEG00005026749 pabpc1b (ENSMZEG00005026745) ENSMZEG00005026746 LIX1L (ENSMZEG00005026743) sf3b4 (ENSMZEG00005026741) #22 SV2A (ENSMZEG00005026738) #23 ENSMZEG00005026735 ENSMZEG00005026732 lingo4a (ENSMZEG00005026731) vps72a (ENSMZEG00005026730) ENSMZEG00005026729 ENSMZEG00005026728 znf516 (ENSMZEG00005026727) ENSMZEG00005026726 tshz1 (ENSMZEG00005026725) CSMD3 (ENSMZEG00005026724) trps1 (ENSMZEG00005026723) clptm1l (ENSMZEG00005026722) rplp1 (ENSMZEG00005026720) PTK2 (ENSMZEG00005026719) Eastern happy MODERN SPECIES 13 RIDA (ENSACLG00000014849) stk3 (ENSACLG00000014793) ENSACLG00000014734 spag1a (ENSACLG00000014714) ENSACLG00000014686 ptpn2b (ENSACLG00000014579) psmg2 (ENSACLG00000014525) zgc:136493 (ENSACLG00000014512) ncaldb (ENSACLG00000014508) grhl2b (ENSACLG00000014447) znf706 (ENSACLG00000014423) ENSACLG00000014375 pabpc1b (ENSACLG00000014335) ENSACLG00000014302 LIX1L (ENSACLG00000014271) sf3b4 (ENSACLG00000014260) #22 SV2A (ENSACLG00000014186) #23 ENSACLG00000014098 lingo4a (ENSACLG00000014091) ctss1 (ENSACLG00000014073) vps72a (ENSACLG00000014023) SYNGAP1 (ENSACLG00000013965) ENSACLG00000013930 znf516 (ENSACLG00000013902) tshz1 (ENSACLG00000013882) CSMD3 (ENSACLG00000013677) ENSACLG00000013155 trps1 (ENSACLG00000013131) clptm1l (ENSACLG00000012698) rplp1 (ENSACLG00000012690) PTK2 (ENSACLG00000012512) Lyretail cichlid MODERN SPECIES 302 RIDA (ENSNBRG00000013480) stk3 (ENSNBRG00000013508) polr2k (ENSNBRG00000013533) spag1a (ENSNBRG00000013546) ENSNBRG00000013559 ptpn2b (ENSNBRG00000013566) psmg2 (ENSNBRG00000013589) zgc:136493 (ENSNBRG00000013613) ncaldb (ENSNBRG00000013632) grhl2b (ENSNBRG00000013652) znf706 (ENSNBRG00000013690) ENSNBRG00000013700 pabpc1b (ENSNBRG00000013737) ENSNBRG00000013830 LIX1L (ENSNBRG00000013844) sf3b4 (ENSNBRG00000013865) #22 SV2A (ENSNBRG00000013892) #23 ENSNBRG00000013925 ENSNBRG00000013953 lingo4a (ENSNBRG00000013990) vps72a (ENSNBRG00000014002) SYNGAP1 (ENSNBRG00000014033) ENSNBRG00000014140 znf516 (ENSNBRG00000014157) tshz1 (ENSNBRG00000014165) CSMD3 (ENSNBRG00000014186) trps1 (ENSNBRG00000014352) clptm1l (ENSNBRG00000014408) rplp1 (ENSNBRG00000014452) ENSNBRG00000014464 ENSNBRG00000014483 Midas cichlid MODERN SPECIES 1307 rpl30 (ENSACIG00000016450) RIDA (ENSACIG00000016465) stk3 (ENSACIG00000016478) ENSACIG00000016512 spag1a (ENSACIG00000016527) ENSACIG00000016562 ptpn2b (ENSACIG00000016589) ENSACIG00000016614 ncaldb (ENSACIG00000016629) grhl2b (ENSACIG00000016643) ENSACIG00000016669 ENSACIG00000016755 pabpc1b (ENSACIG00000018366) ENSACIG00000018405 LIX1L (ENSACIG00000018419) sf3b4 (ENSACIG00000018455) #22 SV2A (ENSACIG00000018471) #23 ENSACIG00000018495 ENSACIG00000018515 lingo4a (ENSACIG00000018535) vps72a (ENSACIG00000018543) SYNGAP1 (ENSACIG00000018557) ENSACIG00000018594 tshz1 (ENSACIG00000018602) CSMD3 (ENSACIG00000018627) ENSACIG00000018718 ENSACIG00000018731 trps1 (ENSACIG00000018741) clptm1l (ENSACIG00000018782) ENSACIG00000018806 PTK2 (ENSACIG00000018814) Cod MODERN SPECIES 14 rpl30 (ENSGMOG00000002186) RIDA (ENSGMOG00000002196) stk3 (ENSGMOG00000002210) ENSGMOG00000032234 ENSGMOG00000002245 ENSGMOG00000002266 ptpn2b (ENSGMOG00000002289) psmg2 (ENSGMOG00000002323) ncaldb (ENSGMOG00000026467) grhl2b (ENSGMOG00000002368) znf706 (ENSGMOG00000026726) ENSGMOG00000002411 pabpc1b (ENSGMOG00000002448) ENSGMOG00000031648 ENSGMOG00000002496 ENSGMOG00000002519 #22 ENSGMOG00000002532 #23 ENSGMOG00000002565 ENSGMOG00000002589 ENSGMOG00000002639 ENSGMOG00000002645 ENSGMOG00000002665 ENSGMOG00000023748 ENSGMOG00000035253 ENSGMOG00000029802 ENSGMOG00000002786 ENSGMOG00000007072 ENSGMOG00000003124 ENSGMOG00000031213 ENSGMOG00000022786 ENSGMOG00000016795 Otomorpha ANCESTRAL SPECIES ENSGT00870000136537 #22 Clupeiformes ANCESTRAL SPECIES 385 ENSGT00940000166429 ENSGT00940000154996.a.a.b ENSGT00940000158438.m ENSGT00390000018560.a.a.a.a.b ENSGT00870000136537 #22 ENSGT00390000014542 ENSGT00390000009042 ENSGT00390000014772.k ENSGT00940000161408 ENSGT00950000183051.a.a.a ENSGT00940000156500 ENSGT00940000163253.a.a.b Denticle herring MODERN SPECIES 12 creb1b (ENSDCDG00000035137) klf7b (ENSDCDG00000035138) ENSDCDG00000035139 zgc:162780 (ENSDCDG00000035140) ramp1 (ENSDCDG00000035141) epb41l5 (ENSDCDG00000035144) LIX1L (ENSDCDG00000035149) afp4 (ENSDCDG00000035151) vps72a (ENSDCDG00000035152) mrpl9 (ENSDCDG00000035154) sema6d (ENSDCDG00000035200) ENSDCDG00000035312 lingo4a (ENSDCDG00000035313) SYNGAP1 (ENSDCDG00000035330) scn1bb (ENSDCDG00000035371) sf3b4 (ENSDCDG00000035373) #22 mrpl24 (ENSDCDG00000035375) prcc (ENSDCDG00000035376) ENSDCDG00000005779 gpr39 (ENSDCDG00000005820) ENSDCDG00000005832 cops8 (ENSDCDG00000005868) ENSDCDG00000006001 ENSDCDG00000006033 ENSDCDG00000006084 ENSDCDG00000006347 ENSDCDG00000006518 cyp51 (ENSDCDG00000006795) ENSDCDG00000008428 ENSDCDG00000008447 MTERF1 (ENSDCDG00000008454) Atlantic herring MODERN SPECIES 10 ENSCHAG00000026185 POU2F2 (ENSCHAG00000026187) erf (ENSCHAG00000026189) CIC (ENSCHAG00000026192) gsk3aa (ENSCHAG00000026206) ENSCHAG00000026247 GRIK5 (ENSCHAG00000026252) ENSCHAG00000026339 zgc:174904 (ENSCHAG00000026344) gnb3b (ENSCHAG00000026346) tpi1a (ENSCHAG00000026350) eno2 (ENSCHAG00000026360) cdc42l (ENSCHAG00000002415) chd4a (ENSCHAG00000002793) naxe (ENSCHAG00000007145) sf3b4 (ENSCHAG00000007167) #22 mrpl24 (ENSCHAG00000007178) prcc (ENSCHAG00000007189) ENSCHAG00000007208 znf516 (ENSCHAG00000007326) tshz1 (ENSCHAG00000007345) cndp2 (ENSCHAG00000007351) ENSCHAG00000007479 ENSCHAG00000007497 ENSCHAG00000007546 ENSCHAG00000007577 sema6d (ENSCHAG00000007598) ENSCHAG00000007758 tnfaip8l2a (ENSCHAG00000007782) ENSCHAG00000007801 LIX1L (ENSCHAG00000007816) Otophysi ANCESTRAL SPECIES 354 ENSGT00390000007227.a ENSGT00940000158230.b.b ENSGT00870000136537 #22 ENSGT00940000167560 ENSGT00390000009895 ENSGT00390000016607.b ENSGT01050000244970.a ENSGT00390000014542 ENSGT00390000009042 ENSGT00390000008281 Characiphysae ANCESTRAL SPECIES 127 ENSGT00510000049316 ENSGT00940000153704.B.d ENSGT00940000157439.a ENSGT00940000165750 ENSGT00950000183092.b.a.b ENSGT00940000153845.a.a ENSGT00940000157595 ENSGT00730000111283.a ENSGT00940000159051 ENSGT00940000165323 ENSGT00390000007227.a ENSGT00940000158230.b.b ENSGT00870000136537 #22 ENSGT00940000167560 ENSGT00390000009895 ENSGT00390000016607.b ENSGT01050000244970.a ENSGT00390000014542 ENSGT00390000009042 ENSGT00390000008281 ENSGT00390000005869.a ENSGT00940000159821 ENSGT00950000183151.b ENSGT00940000162035.d ENSGT00390000008918 ENSGT00940000164643 ENSGT00940000154697.a.a.a.b ENSGT00940000166830 Channel catfish MODERN SPECIES 16 mindy1 (ENSIPUG00000011657) ankle1 (ENSIPUG00000011683) ENSIPUG00000011775 ENSIPUG00000011875 ENSIPUG00000011895 42sp43 (ENSIPUG00000011935) STAC2 (ENSIPUG00000011978) FBXL20 (ENSIPUG00000011994) cdk12 (ENSIPUG00000012045) ENSIPUG00000012064 ppp1r1b (ENSIPUG00000012103) stard3 (ENSIPUG00000012130) zgc:91968 (ENSIPUG00000012182) naxe (ENSIPUG00000012193) RAB25 (ENSIPUG00000012218) Sf3b4 (ENSIPUG00000012242) #22 gabpb2a (ENSIPUG00000012281) mllt11 (ENSIPUG00000012288) psmd3 (ENSIPUG00000012305) ENSIPUG00000012344 ENSIPUG00000012380 kpnb1 (ENSIPUG00000012402) ube2m (ENSIPUG00000012452) Fbxl19 (ENSIPUG00000012512) ENSIPUG00000012571 btr30 (ENSIPUG00000012585) icam2 (ENSIPUG00000012628) Utp18 (ENSIPUG00000012648) nm23 (ENSIPUG00000012713) prf1.3 (ENSIPUG00000012765) stx1b (ENSIPUG00000012795) Characiphysae_b ANCESTRAL SPECIES 96 ENSGT00940000160279.h ENSGT00390000017328.b ENSGT00940000153653.a.a ENSGT00510000049316 ENSGT00940000153704.B.d ENSGT00940000157439.a ENSGT00940000165750 ENSGT00950000183092.b.a.b ENSGT00940000153845.a.a ENSGT00940000157595 ENSGT00730000111283.a ENSGT00940000159051 ENSGT00940000165323 ENSGT00390000007227.a ENSGT00940000158230.b.b ENSGT00870000136537 #22 ENSGT00940000167560 ENSGT00390000009895 ENSGT00390000016607.b ENSGT01050000244970.a ENSGT00390000014542 ENSGT00390000009042 ENSGT00390000008281 ENSGT00390000005869.a ENSGT00940000159821 ENSGT00950000183151.b ENSGT00940000162035.d ENSGT00390000008918 ENSGT00940000164643 ENSGT00940000154697.a.a.a.b ENSGT00940000158703 Electric eel MODERN SPECIES 319 ppp1r1b (ENSEEEG00000023860) stard3 (ENSEEEG00000023862) zgc:91968 (ENSEEEG00000023871) naxe (ENSEEEG00000023873) rab25a (ENSEEEG00000023874) sf3b4 (ENSEEEG00000023878) #22 gabpb2a (ENSEEEG00000023880) mllt11 (ENSEEEG00000023881) mindy1 (ENSEEEG00000023882) ENSEEEG00000023883 mrpl24 (ENSEEEG00000023886) prcc (ENSEEEG00000023887) mrpl9 (ENSEEEG00000023888) KLHL10 (ENSEEEG00000023890) ENSEEEG00000023894 ADAM11 (ENSEEEG00000023895) p3h4 (ENSEEEG00000023899) FKBP10 (ENSEEEG00000023908) NT5C3B (ENSEEEG00000023920) KLHL10 (ENSEEEG00000023924) ENSEEEG00000023927 Characoidei ANCESTRAL SPECIES 122 ENSGT00940000160279.h ENSGT00390000017328.b ENSGT00940000153653.a.a ENSGT00510000049316 ENSGT00940000153704.B.d ENSGT00940000157439.a ENSGT00940000165750 ENSGT00950000183092.b.a.b ENSGT00940000153845.a.a ENSGT00940000157595 ENSGT00730000111283.a ENSGT00940000159051 ENSGT00940000165323 ENSGT00390000007227.a ENSGT00940000158230.b.b ENSGT00870000136537 #22 ENSGT00940000167560 ENSGT00390000009895 ENSGT00390000016607.b ENSGT01050000244970.a ENSGT00390000014542 ENSGT00390000009042 ENSGT00390000008281 ENSGT00390000005869.a ENSGT00940000159821 ENSGT00950000183151.b ENSGT00940000162035.d ENSGT00390000008918 ENSGT00940000164643 ENSGT00940000154697.a.a.a.b ENSGT00940000158703 Mexicana tetra MODERN SPECIES 15 SAMD14 (ENSAMXG00000008049) ENSAMXG00000031233 psmd3 (ENSAMXG00000030231) zgc:85936 (ENSAMXG00000040226) TBKBP1 (ENSAMXG00000008086) ENSAMXG00000008092 42sp43 (ENSAMXG00000008097) STAC2 (ENSAMXG00000033078) FBXL20 (ENSAMXG00000041574) CDK12 (ENSAMXG00000038884) ppp1r1b (ENSAMXG00000036905) stard3 (ENSAMXG00000038462) zgc:91968 (ENSAMXG00000039253) naxe (ENSAMXG00000008235) rab25a (ENSAMXG00000040879) sf3b4 (ENSAMXG00000008282) #22 gabpb2a (ENSAMXG00000008307) mllt11 (ENSAMXG00000025899) mindy1 (ENSAMXG00000008332) ENSAMXG00000008359 mrpl24 (ENSAMXG00000008374) ENSAMXG00000033020 prcc (ENSAMXG00000043281) mrpl9 (ENSAMXG00000041268) LIX1L (ENSAMXG00000032298) adck5 (ENSAMXG00000008444) ENSAMXG00000033600 cpsf1 (ENSAMXG00000008485) ENSAMXG00000039891 ENSAMXG00000034275 ENSAMXG00000031810 Red-bellied piranha MODERN SPECIES 488 psmd3 (ENSPNAG00000008355) zgc:85936 (ENSPNAG00000000915) TBKBP1 (ENSPNAG00000000909) ENSPNAG00000000891 42sp43 (ENSPNAG00000000815) STAC2 (ENSPNAG00000000808) FBXL20 (ENSPNAG00000008217) CDK12 (ENSPNAG00000000773) ppp1r1b (ENSPNAG00000008190) stard3 (ENSPNAG00000000749) zgc:91968 (ENSPNAG00000000706) naxe (ENSPNAG00000000702) rab25a (ENSPNAG00000000694) sf3b4 (ENSPNAG00000000686) #22 gabpb2a (ENSPNAG00000008110) mllt11 (ENSPNAG00000008103) mindy1 (ENSPNAG00000008100) ENSPNAG00000000659 mrpl24 (ENSPNAG00000008084) Cyprinoidei ANCESTRAL SPECIES 33 ENSGT00390000007227.a ENSGT00940000158230.b.b ENSGT00870000136537 #22 ENSGT00940000167560 ENSGT00390000009895 ENSGT00390000016607.b ENSGT01050000244970.a ENSGT00390000014542 ENSGT00390000009042 ENSGT00390000008281 ENSGT00940000167151 ENSGT00730000111747.b ENSGT00940000154172.b ENSGT00940000168219 ENSGT00940000166691 ENSGT00530000063948.a ENSGT00940000154489.B.a ENSGT00950000183065.B.f Cyprininae DUPLICATION Cyprininae ANCESTRAL SPECIES 143 ENSGT01060000248801.a ENSGT00740000117011 ENSGT00940000163549.c ENSGT00940000161897.b.a.a ENSGT00390000018422.c ENSGT00390000016546 ENSGT00950000183130.C ENSGT00950000183186.B.b.d.a.b ENSGT00390000010209.c.a.c ENSGT00940000160387 ENSGT00940000160042.b.a.a ENSGT00390000011759.f ENSGT00940000155187.B.p.b ENSGT00390000007227.a.g ENSGT00940000158230.b.b.e ENSGT00870000136537.c #22 ENSGT00940000167560.k ENSGT00390000009895.a.a ENSGT00390000016607.b.r ENSGT01050000244970.a.a ENSGT00390000014542.a ENSGT00390000009042.e ENSGT00390000008281 ENSGT00940000167151 ENSGT00730000111747.b.c ENSGT00940000154172.b.d ENSGT00940000168219 ENSGT00940000166691 ENSGT00530000063948.a ENSGT00940000154489.B.a.f ENSGT00950000183065.B.f.b Goldfish MODERN SPECIES 10 ENSCARG00000013920 zgc:86598 (ENSCARG00000013937) stm (ENSCARG00000013989) hsf1 (ENSCARG00000014030) bop1 (ENSCARG00000014109) scxa (ENSCARG00000014339) hgh1 (ENSCARG00000014342) exosc7 (ENSCARG00000014352) CLEC3B (ENSCARG00000014356) ENSCARG00000014360 RECQL4 (ENSCARG00000014374) ENSCARG00000014541 oxr1b (ENSCARG00000014610) naxe (ENSCARG00000015901) rab25a (ENSCARG00000015911) sf3b4 (ENSCARG00000015931) #22 gabpb2a (ENSCARG00000015943) mllt11 (ENSCARG00000015955) mindy1 (ENSCARG00000015960) ENSCARG00000015978 mrpl24 (ENSCARG00000015986) prcc (ENSCARG00000016005) mrpl9 (ENSCARG00000016012) ENSCARG00000016034 LIX1L (ENSCARG00000016055) s100a11 (ENSCARG00000016062) s100u (ENSCARG00000016080) s100s (ENSCARG00000016101) pygo2 (ENSCARG00000016116) cgnb (ENSCARG00000016134) ENSCARG00000016197 Cyprininae_a ANCESTRAL SPECIES 43 ENSGT01030000234575.c.a.a.a.a.a.a.b.b.a.a.b.b.d.a.a ENSGT00390000004215.a.b.b.c.b.c.b ENSGT01060000248801.b ENSGT00740000117011 ENSGT00940000163549.c ENSGT00940000161897.b.a.a ENSGT00390000018422.c ENSGT00390000016546.k ENSGT00950000183130.C.g ENSGT00390000010209.c.a.c ENSGT00940000160387 ENSGT00390000011759.f ENSGT00940000155187.B.p.b ENSGT00390000007227.a.g ENSGT00940000158230.b.b.e ENSGT00870000136537.c #22 ENSGT00940000167560.k ENSGT00390000009895.a.a ENSGT00390000016607.b.r ENSGT01050000244970.a.a ENSGT00390000014542.a ENSGT00390000009042.e ENSGT00390000008281 ENSGT00940000167151 ENSGT00730000111747.b.c ENSGT00940000154172.b.d ENSGT00940000168219 ENSGT00940000166691.a ENSGT00530000063948.a ENSGT00940000154489.B.a.f ENSGT00950000183065.B.f.b Common carp reference MODERN SPECIES 12 si:ch211-80h18.1 (ENSCCRG00000003110) hsf1 (ENSCCRG00000013317) bop1 (ENSCCRG00000003804) scxa (ENSCCRG00000080070) ENSCCRG00000070667 hgh1 (ENSCCRG00000003278) exosc7 (ENSCCRG00000057697) ENSCCRG00000070954 ENSCCRG00000059189 ENSCCRG00000055576 ENSCCRG00000010905 ENSCCRG00000072842 ENSCCRG00000004284 ENSCCRG00000032236 ENSCCRG00000049553 sf3b4 (ENSCCRG00000067529) #22 gabpb2a (ENSCCRG00000068978) mllt11 (ENSCCRG00000076923) mindy1 (ENSCCRG00000077567) ENSCCRG00000010061 mrpl24 (ENSCCRG00000010166) prcc (ENSCCRG00000010048) mrpl9 (ENSCCRG00000010154) ENSCCRG00000068558 ENSCCRG00000006090 s100a11 (ENSCCRG00000006085) ENSCCRG00000006063 s100s (ENSCCRG00000054767) ENSCCRG00000066405 cgnb (ENSCCRG00000079708) ENSCCRG00000007940 Golden-line barbel MODERN SPECIES 115 ENSSGRG00000007287 ENSSGRG00000007277 ENSSGRG00000007271 zgc:86598 (ENSSGRG00000004876) hsf1 (ENSSGRG00000003421) scxa (ENSSGRG00000003388) bop1 (ENSSGRG00000001807) hgh1 (ENSSGRG00000001786) exosc7 (ENSSGRG00000001783) ENSSGRG00000001781 ENSSGRG00000001606 ENSSGRG00000001603 oxr1b (ENSSGRG00000001402) naxe (ENSSGRG00000001296) rab25a (ENSSGRG00000001211) sf3b4 (ENSSGRG00000001194) #22 gabpb2a (ENSSGRG00000001157) mllt11 (ENSSGRG00000054841) mindy1 (ENSSGRG00000054840) ENSSGRG00000054839 prcc (ENSSGRG00000054838) mrpl9 (ENSSGRG00000054837) lix1l (ENSSGRG00000054836) ENSSGRG00000054833 s100a11 (ENSSGRG00000054832) s100u (ENSSGRG00000054831) s100s (ENSSGRG00000054829) pygo2 (ENSSGRG00000054827) cgnb (ENSSGRG00000054825) ENSSGRG00000054822 ubap2l (ENSSGRG00000054604) Cyprininae ANCESTRAL SPECIES 185 ENSGT00950000183186.B.b.d.a.a ENSGT00390000010209.c.a.d ENSGT00940000155187.B.p.a ENSGT00390000007227.a.h ENSGT00940000158230.b.b.f ENSGT00870000136537.d #22 ENSGT00940000167560.l ENSGT00390000009895.a.b ENSGT00390000016607.b.q ENSGT01050000244970.a.b ENSGT00390000014542.b ENSGT00390000009042.f ENSGT00390000005869.a.a.a ENSGT00730000111747.b.d ENSGT00940000154172.b.c ENSGT00940000171931 ENSGT00940000168838 ENSGT00940000154489.B.a.e ENSGT00950000183065.B.f.a ENSGT00390000003453.b.b.b ENSGT00390000018324.b Goldfish MODERN SPECIES 38 ENSCARG00000023263 ENSCARG00000023272 ENSCARG00000023309 ENSCARG00000023325 zgc:86598 (ENSCARG00000023386) stm (ENSCARG00000023573) hsf1 (ENSCARG00000023614) bop1 (ENSCARG00000023767) scxa (ENSCARG00000024286) ENSCARG00000024291 CLEC3B (ENSCARG00000024306) ENSCARG00000024314 oxr1b (ENSCARG00000024372) naxe (ENSCARG00000025413) rab25a (ENSCARG00000025457) sf3b4 (ENSCARG00000025469) #22 gabpb2a (ENSCARG00000025481) mllt11 (ENSCARG00000025492) mindy1 (ENSCARG00000025495) ENSCARG00000025505 mrpl24 (ENSCARG00000025520) prcc (ENSCARG00000019916) LIX1L (ENSCARG00000019920) ENSCARG00000019933 s100a11 (ENSCARG00000019949) s100u (ENSCARG00000019953) s100s (ENSCARG00000019955) pygo2 (ENSCARG00000019960) cgnb (ENSCARG00000019963) ENSCARG00000019974 ubap2l (ENSCARG00000020007) Cyprininae_a ANCESTRAL SPECIES 52 ENSGT00390000016546.l ENSGT00950000183130.C.h ENSGT00950000183186.B.b.d.b ENSGT00950000183186.B.b.d.a.a ENSGT00390000010209.c.a.d ENSGT00940000155187.B.p.a ENSGT00390000007227.a.h ENSGT00940000158230.b.b.f ENSGT00870000136537.d #22 ENSGT00940000167560.l ENSGT00390000009895.a.b ENSGT00390000016607.b.q ENSGT01050000244970.a.b ENSGT00390000014542.b ENSGT00390000009042.f ENSGT00390000005869.a.a.a ENSGT00730000111747.b.d ENSGT00940000154172.b.c ENSGT00940000171931 ENSGT00940000166691.b ENSGT00940000168838 ENSGT00940000154489.B.a.e ENSGT00950000183065.B.f.a ENSGT00390000003453.b.b.b Common carp reference MODERN SPECIES 31 ENSCCRG00000058987 ENSCCRG00000065034 zgc:86598 (ENSCCRG00000002859) stm (ENSCCRG00000074171) si:ch211-80h18.1 (ENSCCRG00000026925) hsf1 (ENSCCRG00000026946) scxa (ENSCCRG00000007381) bop1 (ENSCCRG00000003247) hgh1 (ENSCCRG00000081597) exosc7 (ENSCCRG00000003338) ENSCCRG00000078873 ENSCCRG00000004273 oxr1b (ENSCCRG00000010834) naxe (ENSCCRG00000010831) rab25a (ENSCCRG00000057580) sf3b4 (ENSCCRG00000010818) #22 gabpb2a (ENSCCRG00000010806) mllt11 (ENSCCRG00000079312) mindy1 (ENSCCRG00000071056) ENSCCRG00000077954 mrpl24 (ENSCCRG00000010053) prcc (ENSCCRG00000072373) ENSCCRG00000010026 ENSCCRG00000066755 s100a11 (ENSCCRG00000010018) ENSCCRG00000070538 s100s (ENSCCRG00000055021) ENSCCRG00000072601 cgnb (ENSCCRG00000070443) ENSCCRG00000069050 ENSCCRG00000067698 Golden-line barbel MODERN SPECIES 693 ENSSGRG00000005991 ENSSGRG00000006010 zgc:86598 (ENSSGRG00000006080) hsf1 (ENSSGRG00000007504) bop1 (ENSSGRG00000007509) scxa (ENSSGRG00000007510) hgh1 (ENSSGRG00000007511) exosc7 (ENSSGRG00000007517) CLEC3B (ENSSGRG00000007686) CLEC3B (ENSSGRG00000007689) ENSSGRG00000007690 ENSSGRG00000007693 oxr1b (ENSSGRG00000007695) naxe (ENSSGRG00000007696) rab25a (ENSSGRG00000007697) sf3b4 (ENSSGRG00000007700) #22 gabpb2a (ENSSGRG00000007703) mindy1 (ENSSGRG00000007705) ENSSGRG00000007707 mrpl24 (ENSSGRG00000007712) mrpl9 (ENSSGRG00000007750) LIX1L (ENSSGRG00000007754) ENSSGRG00000007760 s100a11 (ENSSGRG00000007769) s100s (ENSSGRG00000007772) ENSSGRG00000007774 cgnb (ENSSGRG00000007777) Zebrafish MODERN SPECIES 10 psmb13a (ENSDARG00000001656) psmb12 (ENSDARG00000031885) psmb9a (ENSDARG00000000656) tap2a (ENSDARG00000036787) brd2a (ENSDARG00000022280) hsd17b8 (ENSDARG00000001169) col11a2 (ENSDARG00000012422) ENSDARG00000109804 rxrba (ENSDARG00000078954) sdha (ENSDARG00000016721) ccdc127b (ENSDARG00000008946) SQLE (ENSDARG00000063319) oxr1b (ENSDARG00000063310) naxe (ENSDARG00000058806) rab25a (ENSDARG00000058800) sf3b4 (ENSDARG00000018574) #22 gabpb2a (ENSDARG00000007943) mllt11 (ENSDARG00000071026) mindy1 (ENSDARG00000004866) ENSDARG00000063258 mrpl24 (ENSDARG00000019222) prcc (ENSDARG00000063252) mrpl9 (ENSDARG00000063249) lix1l (ENSDARG00000063244) ENSDARG00000071015 s100a11 (ENSDARG00000093628) s100u (ENSDARG00000071014) s100s (ENSDARG00000036773) pygo2 (ENSDARG00000036772) cgnb (ENSDARG00000058690) ENSDARG00000036767 Osteoglossiformes ANCESTRAL SPECIES 9 ENSGT00390000009448 ENSGT00940000160991.a ENSGT00940000161735 ENSGT00940000160991.b ENSGT00950000183180.a.b.k ENSGT00940000158438.m ENSGT00940000161280 ENSGT00940000160567.o ENSGT01030000234534.B.a.a.b.c ENSGT00940000159412.f ENSGT00760000119652 ENSGT00390000005869.a ENSGT00730000111185.db.b ENSGT00940000159172.i #20 ENSGT00940000160276.k #21 ENSGT00870000136537 #22 ENSGT00950000182940.b.a.b.a.b #23 ENSGT00940000165753.a ENSGT00390000008158.b.b.a.a.q.a ENSGT00390000010118.c.b ENSGT00940000165143.a.b ENSGT00390000008158.b.a.t ENSGT00390000008158.b.b.a.a.r ENSGT00940000155620.q ENSGT00940000158230.b.b ENSGT00940000165149 ENSGT00940000166523 ENSGT00940000157244.a.b.h ENSGT00940000155333.B.b ENSGT00390000007227.a ENSGT00940000159463.l P. kingsleyae MODERN SPECIES 256 zbtb22b (ENSPKIG00000020013) kifc1 (ENSPKIG00000020054) ENSPKIG00000020092 PHF1 (ENSPKIG00000020134) SYNGAP1 (ENSPKIG00000020252) ATP6V1G2 (ENSPKIG00000020399) PAQR6 (ENSPKIG00000020411) ENSPKIG00000020432 ntrk1 (ENSPKIG00000020463) ENSPKIG00000020524 LIX1L (ENSPKIG00000020538) rbm8a (ENSPKIG00000020558) otud7b (ENSPKIG00000020586) #20 ENSPKIG00000020616 mtmr11 (ENSPKIG00000020642) #21 sf3b4 (ENSPKIG00000020669) #22 SV2A (ENSPKIG00000020700) #23 nr2f5 (ENSPKIG00000020746) ENSPKIG00000020762 si:dkey-266f7.9 (ENSPKIG00000020772) ENSPKIG00000020790 ENSPKIG00000020802 ENSPKIG00000020809 rpz4 (ENSPKIG00000020827) UBQLN4 (ENSPKIG00000020843) rab25a (ENSPKIG00000020869) rab11al (ENSPKIG00000020893) ENSPKIG00000020911 LMNA (ENSPKIG00000020936) ENSPKIG00000021015 naxe (ENSPKIG00000021115) Asian bonytongue MODERN SPECIES 15 daxx (ENSSFOG00015009918) zbtb22b (ENSSFOG00015009905) kifc1 (ENSSFOG00015009879) ENSSFOG00015030652 ENSSFOG00015009653 SYNGAP1 (ENSSFOG00015009582) ATP6V1G2 (ENSSFOG00015009555) PAQR6 (ENSSFOG00015009179) ENSSFOG00015009106 ntrk1 (ENSSFOG00015009061) afp4 (ENSSFOG00015009052) LIX1L (ENSSFOG00015024550) rbm8a (ENSSFOG00015009007) otud7b (ENSSFOG00015008954) #20 mtmr11 (ENSSFOG00015008876) #21 sf3b4 (ENSSFOG00015008864) #22 SV2A (ENSSFOG00015008824) #23 ENSSFOG00015029765 nr2f5 (ENSSFOG00015027367) ENSSFOG00015008770 si:dkey-266f7.9 (ENSSFOG00015033274) ENSSFOG00015008740 ENSSFOG00015008733 rpz4 (ENSSFOG00015008728) UBQLN4 (ENSSFOG00015008691) rab25a (ENSSFOG00015028188) rab11al (ENSSFOG00015028707) ENSSFOG00015030773 LMNA (ENSSFOG00015008546) ENSSFOG00015008507 APOA1BP (ENSSFOG00015008464) Spotted gar MODERN SPECIES 663 ENSLOCG00000009129 ENSLOCG00000009120 ENSLOCG00000009111 ENSLOCG00000009101 LIX1L (ENSLOCG00000009089) rbm8a (ENSLOCG00000009082) otud7b (ENSLOCG00000009073) #20 mtmr11 (ENSLOCG00000009056) #21 sf3b4 (ENSLOCG00000009048) #22 SV2A (ENSLOCG00000009018) #23 bola1 (ENSLOCG00000017692) #24 nr2f5 (ENSLOCG00000009006) ENSLOCG00000009000 ENSLOCG00000008991 ENSLOCG00000008968 ENSLOCG00000008950 ENSLOCG00000008940 ENSLOCG00000017691 rpz2 (ENSLOCG00000017690) ENSLOCG00000017689 ENSLOCG00000017688 ENSLOCG00000017687 rpz6 (ENSLOCG00000017686) rpz5 (ENSLOCG00000017685)