Euarchontoglires_A	ANCESTRAL SPECIES	4	ENSGT00390000004450 #8	ENSGT00440000039055 #9	ENSGT00940000159874 #10	ENSGT00550000074820.h #11	ENSGT00940000159730 #12	ENSGT00390000004574 #13	ENSGT00940000158572 #14	ENSGT00940000153451.a.a.a #15	ENSGT00940000157961.C #16	ENSGT00860000135964	ENSGT00940000157982.b #17	ENSGT00940000156314 #18	ENSGT00940000160776 #19	ENSGT00390000012679 #20	ENSGT00940000155246 #21	ENSGT00550000074898 #22	ENSGT00940000153704.B #23	ENSGT00940000160397 #24	ENSGT00940000157439 #25	ENSGT00390000000603 #26	ENSGT00940000161315 #27	ENSGT00390000013474.b.a #28	ENSGT00940000161498 #29	ENSGT00940000159590 #30	ENSGT00390000011219 #31	ENSGT00940000154534.a #32	ENSGT00390000000713 #33	ENSGT00390000004405.b #34	ENSGT00950000182892.a.b.a.a #35	ENSGT00940000154152.d.b #36	ENSGT00940000160113 #37
Glires	ANCESTRAL SPECIES	3	ENSGT00390000004450 #8	ENSGT00440000039055 #9	ENSGT00940000159874 #10	ENSGT00550000074820.h #11	ENSGT00940000159730 #12	ENSGT00390000004574 #13	ENSGT00940000158572 #14	ENSGT00940000153451.a.a.a #15	ENSGT00940000157961.C #16	ENSGT00860000135964	ENSGT00940000157982.b #17	ENSGT00940000156314 #18	ENSGT00940000160776 #19	ENSGT00390000012679 #20	ENSGT00940000155246 #21	ENSGT00550000074898 #22	ENSGT00940000153704.B #23	ENSGT00940000160397 #24	ENSGT00940000157439 #25	ENSGT00390000000603 #26	ENSGT00940000161315 #27	ENSGT00390000013474.b.a #28	ENSGT00940000161498 #29	ENSGT00940000159590 #30	ENSGT00390000011219 #31	ENSGT00940000154534.a #32	ENSGT00390000000713 #33	ENSGT00390000004405.b #34	ENSGT00950000182892.a.b.a.a #35	ENSGT00940000154152.d.b.dc #36	ENSGT00940000160113 #37
Rodentia	ANCESTRAL SPECIES	4	ENSGT00390000004450 #8	ENSGT00440000039055 #9	ENSGT00940000159874 #10	ENSGT00550000074820.h #11	ENSGT00940000159730 #12	ENSGT00390000004574 #13	ENSGT00940000158572 #14	ENSGT00940000153451.a.a.a #15	ENSGT00940000157961.C #16	ENSGT00860000135964	ENSGT00940000157982.b #17	ENSGT00940000156314 #18	ENSGT00940000160776 #19	ENSGT00390000012679 #20	ENSGT00940000155246 #21	ENSGT00550000074898 #22	ENSGT00940000153704.B #23	ENSGT00940000160397 #24	ENSGT00940000157439 #25	ENSGT00390000000603 #26	ENSGT00940000161315 #27	ENSGT00390000013474.b.a #28	ENSGT00940000161498 #29	ENSGT00940000159590 #30	ENSGT00390000011219 #31	ENSGT00940000154534.a #32	ENSGT00390000000713 #33	ENSGT00390000004405.b #34	ENSGT00950000182892.a.b.a.a #35	ENSGT00940000154152.d.b.dc.b #36	ENSGT00940000160113 #37
Rodentia_A	ANCESTRAL SPECIES	3	ENSGT00390000004450 #8	ENSGT00440000039055 #9	ENSGT00940000159874 #10	ENSGT00550000074820.h #11	ENSGT00940000159730 #12	ENSGT00390000004574 #13	ENSGT00940000158572 #14	ENSGT00940000153451.a.a.a #15	ENSGT00940000157961.C #16	ENSGT00860000135964	ENSGT00940000157982.b #17	ENSGT00940000156314 #18	ENSGT00940000160776 #19	ENSGT00390000012679 #20	ENSGT00940000155246 #21	ENSGT00550000074898 #22	ENSGT00940000153704.B #23	ENSGT00940000160397 #24	ENSGT00940000157439 #25	ENSGT00390000000603 #26	ENSGT00940000161315 #27	ENSGT00390000013474.b.a #28	ENSGT00940000161498 #29	ENSGT00940000159590 #30	ENSGT00390000011219 #31	ENSGT00940000154534.a #32	ENSGT00390000000713 #33	ENSGT00390000004405.b #34	ENSGT00950000182892.a.b.a.a #35	ENSGT00940000154152.d.b.dc.b #36	ENSGT00940000160113 #37
Sciuridae	ANCESTRAL SPECIES	4	ENSGT00390000004450 #8	ENSGT00440000039055 #9	ENSGT00940000159874 #10	ENSGT00550000074820.h #11	ENSGT00940000159730 #12	ENSGT00390000004574 #13	ENSGT00940000158572 #14	ENSGT00940000153451.a.a.a #15	ENSGT00940000157961.C #16	ENSGT00860000135964	ENSGT00940000157982.b #17	ENSGT00940000156314 #18	ENSGT00940000160776 #19	ENSGT00390000012679 #20	ENSGT00940000155246 #21	ENSGT00550000074898 #22	ENSGT00940000153704.B #23	ENSGT00940000160397 #24	ENSGT00940000157439 #25	ENSGT00390000000603 #26	ENSGT00940000161315 #27	ENSGT00390000013474.b.a #28	ENSGT00940000161498 #29	ENSGT00940000159590 #30	ENSGT00390000011219 #31	ENSGT00940000154534.a #32	ENSGT00390000000713 #33	ENSGT00390000004405.b #34	ENSGT00950000182892.a.b.a.a #35	ENSGT00940000154152.d.b.dc.b #36	ENSGT00940000160113 #37
Marmotini	ANCESTRAL SPECIES	8	ENSGT00390000004450 #8	ENSGT00440000039055 #9	ENSGT00940000159874 #10	ENSGT00550000074820.h #11	ENSGT00940000159730 #12	ENSGT00390000004574 #13	ENSGT00940000158572 #14	ENSGT00940000153451.a.a.a #15	ENSGT00940000157961.C #16	ENSGT00860000135964	ENSGT00940000157982.b #17	ENSGT00940000156314 #18	ENSGT00940000160776 #19	ENSGT00390000012679.o #20	ENSGT00940000155246 #21	ENSGT00550000074898 #22	ENSGT00940000153704.B #23	ENSGT00940000160397 #24	ENSGT00940000157439 #25	ENSGT00390000000603 #26	ENSGT00940000161315 #27	ENSGT00390000013474.b.a #28	ENSGT00940000161498 #29	ENSGT00940000159590 #30	ENSGT00390000011219 #31	ENSGT00940000154534.a #32	ENSGT00390000000713 #33	ENSGT00390000004405.b #34	ENSGT00950000182892.a.b.a.a #35	ENSGT00940000154152.d.b.dc.b #36	ENSGT00940000160113 #37
Marmotini_b	ANCESTRAL SPECIES	5	ENSGT00390000004690.a.a.v #7	ENSGT00390000004450 #8	ENSGT00440000039055 #9	ENSGT00940000159874 #10	ENSGT00550000074820.h #11	ENSGT00940000159730 #12	ENSGT00390000004574 #13	ENSGT00940000158572 #14	ENSGT00940000153451.a.a.a #15	ENSGT00940000157961.C #16	ENSGT00940000157982.b #17	ENSGT00940000156314 #18	ENSGT00940000160776 #19	ENSGT00390000012679.o #20	ENSGT00940000155246 #21	ENSGT00550000074898 #22	ENSGT00940000153704.B #23	ENSGT00940000160397 #24	ENSGT00940000157439 #25	ENSGT00390000000603 #26	ENSGT00940000161315 #27	ENSGT00390000013474.b.a #28	ENSGT00940000161498 #29	ENSGT00940000159590 #30	ENSGT00390000011219 #31	ENSGT00940000154534.a #32	ENSGT00390000000713 #33	ENSGT00390000004405.b #34	ENSGT00950000182892.a.b.a.a #35	ENSGT00940000154152.d.b.dc.b #36	ENSGT00940000160113 #37
Squirrel	MODERN SPECIES	90	RPL23 (ENSSTOG00000014279) #7	C17orf98 (ENSSTOG00000020791) #8	CWC25 (ENSSTOG00000014268) #9	PIP4K2B (ENSSTOG00000014263) #10	PSMB3 (ENSSTOG00000014258) #11	PCGF2 (ENSSTOG00000014254) #12	CISD3 (ENSSTOG00000022806) #13	MLLT6 (ENSSTOG00000014229) #14	EPOP (ENSSTOG00000022964) #15	SRCIN1 (ENSSTOG00000028994) #16	ARHGAP23 (ENSSTOG00000029240) #17	SOCS7 (ENSSTOG00000000068) #18	GPR179 (ENSSTOG00000024299) #19	ENSSTOG00000000304 #20	NPEPPS (ENSSTOG00000004901) #21	KPNB1 (ENSSTOG00000007896) #22	TBKBP1 (ENSSTOG00000023713) #23	TBX21 (ENSSTOG00000001626) #24	OSBPL7 (ENSSTOG00000001636) #25	MRPL10 (ENSSTOG00000024617) #26	LRRC46 (ENSSTOG00000002068) #27	SCRN2 (ENSSTOG00000027108) #28	SP6 (ENSSTOG00000001607) #29	SP2 (ENSSTOG00000015926) #30	PNPO (ENSSTOG00000006221) #31	PRR15L (ENSSTOG00000006235) #32	CDK5RAP3 (ENSSTOG00000006244) #33	ENSSTOG00000027550 #34	NFE2L1 (ENSSTOG00000013664) #35	CBX1 (ENSSTOG00000023986) #36	SNX11 (ENSSTOG00000013684) #37
Arctic ground squirrel	MODERN SPECIES	46	LASP1 (ENSUPAG00010007211)	ENSUPAG00010007191 #7	C17orf98 (ENSUPAG00010007173) #8	CWC25 (ENSUPAG00010007155) #9	PIP4K2B (ENSUPAG00010007141) #10	PSMB3 (ENSUPAG00010007131) #11	PCGF2 (ENSUPAG00010007076) #12	CISD3 (ENSUPAG00010007056) #13	MLLT6 (ENSUPAG00010006969) #14	SRCIN1 (ENSUPAG00010006849) #16	ARHGAP23 (ENSUPAG00010006763) #17	SOCS7 (ENSUPAG00010006716) #18	GPR179 (ENSUPAG00010006698) #19	ENSUPAG00010006685 #20	NPEPPS (ENSUPAG00010006649) #21	KPNB1 (ENSUPAG00010006624) #22	TBKBP1 (ENSUPAG00010006591) #23	TBX21 (ENSUPAG00010006582) #24	OSBPL7 (ENSUPAG00010006545) #25	MRPL10 (ENSUPAG00010006539) #26	LRRC46 (ENSUPAG00010006533) #27	SCRN2 (ENSUPAG00010006526) #28	SP6 (ENSUPAG00010006522) #29	SP2 (ENSUPAG00010006507) #30	PNPO (ENSUPAG00010006483) #31	PRR15L (ENSUPAG00010006473) #32	CDK5RAP3 (ENSUPAG00010006466) #33	COPZ2 (ENSUPAG00010006455) #34	NFE2L1 (ENSUPAG00010006396) #35	CBX1 (ENSUPAG00010006381) #36	SNX11 (ENSUPAG00010006370) #37
Alpin marmot	MODERN SPECIES	126	ENSMMMG00000019934 #9	ENSMMMG00000019935 #9	PIP4K2B (ENSMMMG00000019941) #10	PSMB3 (ENSMMMG00000019949) #11	PCGF2 (ENSMMMG00000019954) #12	CISD3 (ENSMMMG00000019991) #13	MLLT6 (ENSMMMG00000019996) #14	EPOP (ENSMMMG00000020150) #15	SRCIN1 (ENSMMMG00000020155) #16	ENSMMMG00000020172	ARHGAP23 (ENSMMMG00000020178) #17	SOCS7 (ENSMMMG00000020236) #18	GPR179 (ENSMMMG00000020262) #19	ENSMMMG00000020288 #20	NPEPPS (ENSMMMG00000020297) #21	KPNB1 (ENSMMMG00000020318) #22	ENSMMMG00000020322 #23	TBX21 (ENSMMMG00000020329) #24	ENSMMMG00000020333	OSBPL7 (ENSMMMG00000020336) #25	MRPL10 (ENSMMMG00000020352) #26	LRRC46 (ENSMMMG00000020356) #27	SCRN2 (ENSMMMG00000020372) #28	SP6 (ENSMMMG00000020386) #29	SP2 (ENSMMMG00000020394) #30	PNPO (ENSMMMG00000020407) #31	PRR15L (ENSMMMG00000020424) #32
Eurasian red squirrel	MODERN SPECIES	12	PIP4K2B (ENSSVLG00005015690) #10	PSMB3 (ENSSVLG00005015772) #11	PCGF2 (ENSSVLG00005015826) #12	ENSSVLG00005015868 #13	MLLT6 (ENSSVLG00005015954) #14	EPOP (ENSSVLG00005016002) #15	ENSSVLG00005016009	ENSSVLG00005016032	SRCIN1 (ENSSVLG00005016103) #16	ARHGAP23 (ENSSVLG00005016593) #17	SOCS7 (ENSSVLG00005016676) #18	GPR179 (ENSSVLG00005016761) #19	ENSSVLG00005017021	MRPL45 (ENSSVLG00005017084) #20	NPEPPS (ENSSVLG00005017198) #21	KPNB1 (ENSSVLG00005017557) #22	TBKBP1 (ENSSVLG00005017602) #23	TBX21 (ENSSVLG00005017653) #24	OSBPL7 (ENSSVLG00005017757) #25	MRPL10 (ENSSVLG00005017985) #26	LRRC46 (ENSSVLG00005018036) #27	SCRN2 (ENSSVLG00005018077) #28	SP6 (ENSSVLG00005018194) #29	ENSSVLG00005018218 #30	PNPO (ENSSVLG00005018295) #31	PRR15L (ENSSVLG00005018399) #32	CDK5RAP3 (ENSSVLG00005018459) #33	COPZ2 (ENSSVLG00005018641) #34	NFE2L1 (ENSSVLG00005018798) #35	CBX1 (ENSSVLG00005019034) #36	SNX11 (ENSSVLG00005019122) #37
Hystricomorpha	ANCESTRAL SPECIES	3	ENSGT00390000004690.a.a.v #7	ENSGT00390000004450 #8	ENSGT00440000039055 #9	ENSGT00940000159874 #10	ENSGT00550000074820.h #11	ENSGT00940000159730 #12	ENSGT00390000004574 #13	ENSGT00940000158572 #14	ENSGT00940000153451.a.a.a #15	ENSGT00940000157961.C #16	ENSGT00940000157982.b #17	ENSGT00940000156314 #18	ENSGT00940000160776 #19	ENSGT00390000012679 #20	ENSGT00940000155246 #21	ENSGT00550000074898 #22	ENSGT00940000153704.B #23	ENSGT00940000160397 #24	ENSGT00940000157439 #25	ENSGT00390000000603 #26	ENSGT00940000161315 #27	ENSGT00390000013474.b.a #28	ENSGT00940000161498 #29	ENSGT00940000159590 #30	ENSGT00390000011219 #31	ENSGT00940000154534.a #32	ENSGT00390000000713 #33	ENSGT00390000004405.b #34	ENSGT00950000182892.a.b.a.a #35	ENSGT00940000154152.d.b.dc.b #36	ENSGT00940000160113 #37
Hystricomorpha_a	ANCESTRAL SPECIES		ENSGT00390000004690.a.a.v #7	ENSGT00390000004450 #8	ENSGT00440000039055 #9	ENSGT00940000159874 #10	ENSGT00550000074820.h #11	ENSGT00940000159730 #12	ENSGT00390000004574 #13	ENSGT00940000158572 #14	ENSGT00940000153451.a.a.a #15	ENSGT00940000157961.C #16	ENSGT00940000157982.b #17	ENSGT00940000156314 #18	ENSGT00940000160776 #19	ENSGT00390000012679 #20	ENSGT00940000155246 #21	ENSGT00550000074898 #22	ENSGT00940000153704.B #23	ENSGT00940000160397 #24	ENSGT00940000157439 #25	ENSGT00390000000603 #26	ENSGT00940000161315 #27	ENSGT00390000013474.b.a #28	ENSGT00940000161498 #29	ENSGT00940000159590 #30	ENSGT00390000011219 #31	ENSGT00940000154534.a #32	ENSGT00390000000713 #33	ENSGT00390000004405.b #34	ENSGT00950000182892.a.b.a.a #35	ENSGT00940000154152.d.b.dc.b #36	ENSGT00940000160113 #37
Guinea pig	MODERN SPECIES	53	RPL23 (ENSCPOG00000010002) #7	C17orf98 (ENSCPOG00000023335) #8	CWC25 (ENSCPOG00000015127) #9	PIP4K2B (ENSCPOG00000005470) #10	PSMB3 (ENSCPOG00000025974) #11	PCGF2 (ENSCPOG00000027284) #12	CISD3 (ENSCPOG00000036120) #13	MLLT6 (ENSCPOG00000006561) #14	EPOP (ENSCPOG00000026798) #15	SRCIN1 (ENSCPOG00000022478) #16	ARHGAP23 (ENSCPOG00000025821) #17	SOCS7 (ENSCPOG00000011473) #18	GPR179 (ENSCPOG00000027503) #19	MRPL45 (ENSCPOG00000001574) #20	NPEPPS (ENSCPOG00000006559) #21	KPNB1 (ENSCPOG00000006566) #22	TBKBP1 (ENSCPOG00000036345) #23	TBX21 (ENSCPOG00000026273) #24	OSBPL7 (ENSCPOG00000006914) #25	MRPL10 (ENSCPOG00000037104) #26	LRRC46 (ENSCPOG00000006925) #27	SCRN2 (ENSCPOG00000006929) #28	SP6 (ENSCPOG00000007638) #29	SP2 (ENSCPOG00000014943) #30	PNPO (ENSCPOG00000003187) #31	PRR15L (ENSCPOG00000035567) #32	CDK5RAP3 (ENSCPOG00000007275) #33	COPZ2 (ENSCPOG00000019500) #34	NFE2L1 (ENSCPOG00000030805) #35	CBX1 (ENSCPOG00000034435) #36	SNX11 (ENSCPOG00000020234) #37
Hystricomorpha_b	ANCESTRAL SPECIES		ENSGT00940000154775.c.a	ENSGT00390000004690.a.a.v #7	ENSGT00390000004450 #8	ENSGT00440000039055 #9	ENSGT00940000159874 #10	ENSGT00550000074820.h #11	ENSGT00940000159730 #12	ENSGT00390000004574 #13	ENSGT00940000158572 #14	ENSGT00940000157961.C #16	ENSGT00940000157982.b #17	ENSGT00940000156314 #18	ENSGT00940000160776 #19	ENSGT00390000012679 #20	ENSGT00940000155246 #21	ENSGT00550000074898 #22	ENSGT00940000153704.B #23	ENSGT00940000160397 #24	ENSGT00940000157439 #25	ENSGT00390000000603 #26	ENSGT00940000161315 #27	ENSGT00390000013474.b.a #28	ENSGT00940000161498 #29	ENSGT00940000159590 #30	ENSGT00390000011219 #31	ENSGT00940000154534.a #32	ENSGT00390000000713 #33	ENSGT00390000004405.b #34	ENSGT00950000182892.a.b.a.a #35	ENSGT00940000154152.d.b.dc.b #36	ENSGT00940000160113 #37
Long-tailed chinchilla	MODERN SPECIES	158	LASP1 (ENSCLAG00000015296)	RPL23 (ENSCLAG00000017095) #7	C17orf98 (ENSCLAG00000017144) #8	CWC25 (ENSCLAG00000017102) #9	PIP4K2B (ENSCLAG00000014591) #10	PSMB3 (ENSCLAG00000015553) #11	PCGF2 (ENSCLAG00000016096) #12	CISD3 (ENSCLAG00000014350) #13	MLLT6 (ENSCLAG00000013781) #14	SRCIN1 (ENSCLAG00000015589) #16	ARHGAP23 (ENSCLAG00000014290) #17	SOCS7 (ENSCLAG00000015232) #18	GPR179 (ENSCLAG00000014803) #19	MRPL45 (ENSCLAG00000015324) #20	NPEPPS (ENSCLAG00000016661) #21	KPNB1 (ENSCLAG00000017091) #22	ENSCLAG00000015338 #23	TBX21 (ENSCLAG00000015235) #24	OSBPL7 (ENSCLAG00000014839) #25	MRPL10 (ENSCLAG00000015400) #26	SCRN2 (ENSCLAG00000013965) #28	LRRC46 (ENSCLAG00000016713) #27	SP6 (ENSCLAG00000016276) #29	SP2 (ENSCLAG00000014115) #30	PNPO (ENSCLAG00000013871) #31	PRR15L (ENSCLAG00000017903) #32	CDK5RAP3 (ENSCLAG00000012292) #33	COPZ2 (ENSCLAG00000013544) #34	NFE2L1 (ENSCLAG00000014836) #35	CBX1 (ENSCLAG00000013587) #36	SNX11 (ENSCLAG00000015837) #37
Degu	MODERN SPECIES	97	ENSODEG00000020506	ENSODEG00000017558	ENSODEG00000017564 ##7	C17orf98 (ENSODEG00000017432) #8	CWC25 (ENSODEG00000017487) #9	PIP4K2B (ENSODEG00000017411) #10	ENSODEG00000017437 #11	CISD3 (ENSODEG00000017593) #13	MLLT6 (ENSODEG00000017604) #14	SRCIN1 (ENSODEG00000017506) #16	ARHGAP23 (ENSODEG00000017612) #17	GPR179 (ENSODEG00000017327) #19	MRPL45 (ENSODEG00000017631) #20	SOCS7 (ENSODEG00000017559) #18	NPEPPS (ENSODEG00000017337) #21	KPNB1 (ENSODEG00000017287) #22	ENSODEG00000017455 #23	TBX21 (ENSODEG00000017610) #24	OSBPL7 (ENSODEG00000017364) #25	MRPL10 (ENSODEG00000017536) #26	LRRC46 (ENSODEG00000017367) #27	SCRN2 (ENSODEG00000017395) #28	SP6 (ENSODEG00000017625) #29	SP2 (ENSODEG00000017126) #30	PNPO (ENSODEG00000017424) #31	ENSODEG00000017229 #33	COPZ2 (ENSODEG00000017565) #34	ENSODEG00000020421	NFE2L1 (ENSODEG00000017348) #35	CBX1 (ENSODEG00000017272) #36	SNX11 (ENSODEG00000017458) #37
Naked mole-rat female	MODERN SPECIES	12	CWC25 (ENSHGLG00000014785) #9	PIP4K2B (ENSHGLG00000050783) #10	ENSHGLG00000016190 #11	PCGF2 (ENSHGLG00000015321) #12	CISD3 (ENSHGLG00000009890) #13	MLLT6 (ENSHGLG00000012901) #14	EPOP (ENSHGLG00000047748) #15	ENSHGLG00000021180	SRCIN1 (ENSHGLG00000010912) #16	ARHGAP23 (ENSHGLG00000012944) #17	SOCS7 (ENSHGLG00000035093) #18	ENSHGLG00000041148 #19	ENSHGLG00000050482	ENSHGLG00000010863 #20	ENSHGLG00000012466 #21	KPNB1 (ENSHGLG00000014138) #22	TBKBP1 (ENSHGLG00000049817) #23	TBX21 (ENSHGLG00000012216) #24	OSBPL7 (ENSHGLG00000012525) #25	MRPL10 (ENSHGLG00000048399) #26	LRRC46 (ENSHGLG00000035931) #27	SCRN2 (ENSHGLG00000041375) #28	SP6 (ENSHGLG00000021113) #29	SP2 (ENSHGLG00000009902) #30	PNPO (ENSHGLG00000013159) #31	PRR15L (ENSHGLG00000014696) #32	CDK5RAP3 (ENSHGLG00000019464) #33	COPZ2 (ENSHGLG00000018543) #34	NFE2L1 (ENSHGLG00000012592) #35	CBX1 (ENSHGLG00000013574) #36	SNX11 (ENSHGLG00000016837) #37
Rodentia_B	ANCESTRAL SPECIES	1	ENSGT00390000004690.a.a.v #7	ENSGT00390000004450 #8	ENSGT00440000039055 #9	ENSGT00940000159874 #10	ENSGT00550000074820.h #11	ENSGT00940000159730 #12	ENSGT00390000004574 #13	ENSGT00940000158572 #14	ENSGT00940000153451.a.a.a #15	ENSGT00940000157961.C #16	ENSGT00940000157982.b #17	ENSGT00940000156314 #18	ENSGT00940000160776 #19	ENSGT00390000012679 #20	ENSGT00940000155246 #21	ENSGT00550000074898 #22	ENSGT00940000153704.B #23	ENSGT00940000160397 #24	ENSGT00940000157439 #25	ENSGT00390000000603 #26	ENSGT00940000161315 #27	ENSGT00390000013474.b.a #28	ENSGT00940000161498 #29	ENSGT00940000159590 #30	ENSGT00390000011219 #31	ENSGT00940000154534.a #32	ENSGT00390000000713 #33	ENSGT00390000004405.b #34	ENSGT00950000182892.a.b.a.a #35	ENSGT00940000154152.d.b.dc.b #36	ENSGT00940000160113 #37
Myomorpha	ANCESTRAL SPECIES		ENSGT00390000004690.a.a.v.yb #7	ENSGT00390000004450 #8	ENSGT00440000039055 #9	ENSGT00940000159874 #10	ENSGT00550000074820.h #11	ENSGT00940000159730 #12	ENSGT00390000004574 #13	ENSGT00940000158572 #14	ENSGT00940000153451.a.a.a #15	ENSGT00940000157961.C #16	ENSGT00940000157982.b #17	ENSGT00940000156314 #18	ENSGT00940000160776 #19	ENSGT00390000012679 #20	ENSGT00940000155246 #21	ENSGT00550000074898 #22	ENSGT00940000153704.B #23	ENSGT00940000160397 #24	ENSGT00940000157439 #25	ENSGT00390000000603 #26	ENSGT00940000161315 #27	ENSGT00390000013474.b.a #28	ENSGT00940000161498 #29	ENSGT00940000159590 #30	ENSGT00390000011219 #31	ENSGT00940000154534.a #32	ENSGT00390000000713 #33	ENSGT00390000004405.b #34	ENSGT00950000182892.a.b.a.a #35	ENSGT00940000154152.d.b.dc.b #36	ENSGT00940000160113 #37
Muroidea	ANCESTRAL SPECIES		ENSGT00390000004690.a.a.v.yb #7	ENSGT00390000004450 #8	ENSGT00440000039055 #9	ENSGT00940000159874 #10	ENSGT00550000074820.h #11	ENSGT00940000159730 #12	ENSGT00390000004574 #13	ENSGT00940000158572 #14	ENSGT00940000153451.a.a.a #15	ENSGT00940000157961.C #16	ENSGT00940000157982.b #17	ENSGT00940000156314 #18	ENSGT00940000160776 #19	ENSGT00390000012679 #20	ENSGT00940000155246 #21	ENSGT00550000074898 #22	ENSGT00940000153704.B #23	ENSGT00940000160397 #24	ENSGT00940000157439 #25	ENSGT00390000000603 #26	ENSGT00940000161315 #27	ENSGT00390000013474.b.a #28	ENSGT00940000161498 #29	ENSGT00940000159590 #30	ENSGT00390000011219 #31	ENSGT00940000154534.a #32	ENSGT00390000000713 #33	ENSGT00390000004405.b #34	ENSGT00950000182892.a.b.a.a #35	ENSGT00940000154152.d.b.dc.b #36	ENSGT00940000160113 #37
Muroidea_A	ANCESTRAL SPECIES	1	ENSGT00390000004690.a.a.v.yb #7	ENSGT00390000004450 #8	ENSGT00440000039055 #9	ENSGT00940000159874 #10	ENSGT00550000074820.h #11	ENSGT00940000159730 #12	ENSGT00390000004574 #13	ENSGT00940000158572 #14	ENSGT00940000153451.a.a.a #15	ENSGT00940000157961.C #16	ENSGT00940000157982.b #17	ENSGT00940000156314 #18	ENSGT00940000160776 #19	ENSGT00390000012679 #20	ENSGT00940000155246 #21	ENSGT00550000074898 #22	ENSGT00940000153704.B #23	ENSGT00940000160397 #24	ENSGT00940000157439 #25	ENSGT00390000000603 #26	ENSGT00940000161315 #27	ENSGT00390000013474.b.a #28	ENSGT00940000161498 #29	ENSGT00940000159590 #30	ENSGT00390000011219 #31	ENSGT00940000154534.a #32	ENSGT00390000000713 #33	ENSGT00390000004405.b #34	ENSGT00950000182892.a.b.a.a #35	ENSGT00940000154152.d.b.dc.b #36	ENSGT00940000160113 #37
Cricetidae	ANCESTRAL SPECIES		ENSGT00390000004690.a.a.v.yb #7	ENSGT00390000004450 #8	ENSGT00440000039055 #9	ENSGT00940000159874 #10	ENSGT00550000074820.h #11	ENSGT00940000159730 #12	ENSGT00390000004574 #13	ENSGT00940000158572 #14	ENSGT00940000153451.a.a.a #15	ENSGT00940000157961.C #16	ENSGT00940000157982.b #17	ENSGT00940000156314 #18	ENSGT00940000160776 #19	ENSGT00390000012679 #20	ENSGT00940000155246 #21	ENSGT00550000074898 #22	ENSGT00940000153704.B #23	ENSGT00940000160397 #24	ENSGT00940000157439 #25	ENSGT00390000000603 #26	ENSGT00940000161315 #27	ENSGT00390000013474.b.a #28	ENSGT00940000161498 #29	ENSGT00940000159590 #30	ENSGT00390000011219 #31	ENSGT00940000154534.a #32	ENSGT00390000000713 #33	ENSGT00390000004405.b #34	ENSGT00950000182892.a.b.a.a #35	ENSGT00940000154152.d.b.dc.b #36	ENSGT00940000154152.d.a.a ##36
Cricetinae	ANCESTRAL SPECIES		ENSGT00390000004690.a.a.v.yb #7	ENSGT00390000004450 #8	ENSGT00440000039055 #9	ENSGT00940000159874 #10	ENSGT00550000074820.h.r #11	ENSGT00940000159730 #12	ENSGT00390000004574 #13	ENSGT00940000158572 #14	ENSGT00940000153451.a.a.a #15	ENSGT00940000157961.C #16	ENSGT00940000157982.b #17	ENSGT00940000156314 #18	ENSGT00940000160776 #19	ENSGT00390000012679 #20	ENSGT00940000155246 #21	ENSGT00550000074898 #22	ENSGT00940000153704.B #23	ENSGT00940000160397 #24	ENSGT00940000157439 #25	ENSGT00390000000603 #26	ENSGT00940000161315 #27	ENSGT00390000013474.b.a #28	ENSGT00940000161498 #29	ENSGT00940000159590 #30	ENSGT00390000011219 #31	ENSGT00940000154534.a #32	ENSGT00390000000713 #33	ENSGT00390000004405.b #34	ENSGT00950000182892.a.b.a.a #35	ENSGT00940000154152.d.b.dc.a.b ##36	ENSGT00940000160113 #37
Golden Hamster	MODERN SPECIES	674	Plxdc1 (ENSMAUG00000015907)	Fbxo47 (ENSMAUG00000014452)	ENSMAUG00000021593	Rpl23 (ENSMAUG00000012907) #7	1700001P01Rik (ENSMAUG00000013917) #8	Cwc25 (ENSMAUG00000009241) #9	Pip4k2b (ENSMAUG00000012875) #10	ENSMAUG00000019155 #11	Epop (ENSMAUG00000015662) #15	Srcin1 (ENSMAUG00000021175) #16	Arhgap23 (ENSMAUG00000018856) #17	Socs7 (ENSMAUG00000015461) #18	ENSMAUG00000015632 #19	Mrpl45 (ENSMAUG00000021636) #20	Npepps (ENSMAUG00000017383) #21	Kpnb1 (ENSMAUG00000006211) #22	Tbkbp1 (ENSMAUG00000018604) #23	Tbx21 (ENSMAUG00000017507) #24	Osbpl7 (ENSMAUG00000013876) #25	Mrpl10 (ENSMAUG00000000820) #26	Lrrc46 (ENSMAUG00000019416) #27	Scrn2 (ENSMAUG00000010014) #28	Sp6 (ENSMAUG00000009667) #29	Sp2 (ENSMAUG00000019269) #30	Pnpo (ENSMAUG00000021706) #31	Cdk5rap3 (ENSMAUG00000007991) #33	Copz2 (ENSMAUG00000010560) #34	Nfe2l1 (ENSMAUG00000020456) #35	ENSMAUG00000003463 ##36	Snx11 (ENSMAUG00000021528) #37	Skap1 (ENSMAUG00000022191)
Chinese hamster chok1gshd	MODERN SPECIES	33	1700001P01Rik (ENSCGRG00001023735) #8	Cwc25 (ENSCGRG00001020785) #9	Pip4k2b (ENSCGRG00001013364) #10	ENSCGRG00001013947 #11	Pcgf2 (ENSCGRG00001021517) #12	Cisd3 (ENSCGRG00001010662) #13	Mllt6 (ENSCGRG00001021735) #14	Epop (ENSCGRG00001011711) #15	ENSCGRG00001002748	Srcin1 (ENSCGRG00001017021) #16	Arhgap23 (ENSCGRG00001018199) #17	Socs7 (ENSCGRG00001021949) #18	Gpr179 (ENSCGRG00001014708) #19	Mrpl45 (ENSCGRG00001000066) #20	Npepps (ENSCGRG00001005930) #21	Kpnb1 (ENSCGRG00001016042) #22	Tbkbp1 (ENSCGRG00001018526) #23	Tbx21 (ENSCGRG00001008276) #24	Osbpl7 (ENSCGRG00001013737) #25	Mrpl10 (ENSCGRG00001024199) #26	Lrrc46 (ENSCGRG00001019758) #27	Scrn2 (ENSCGRG00001022143) #28	Sp6 (ENSCGRG00001002797) #29	Sp2 (ENSCGRG00001010976) #30	Pnpo (ENSCGRG00001018189) #31	Prr15l (ENSCGRG00001008926) #32	Cdk5rap3 (ENSCGRG00001006966) #33	Copz2 (ENSCGRG00001014767) #34	Nfe2l1 (ENSCGRG00001015287) #35	Cbx1 (ENSCGRG00001014799) ##36	Snx11 (ENSCGRG00001022221) #37
Cricetidae_B	ANCESTRAL SPECIES		ENSGT00390000004690.a.a.v.yb #7	ENSGT00390000004450 #8	ENSGT00440000039055 #9	ENSGT00940000159874 #10	ENSGT00550000074820.h #11	ENSGT00940000159730 #12	ENSGT00390000004574 #13	ENSGT00940000158572 #14	ENSGT00940000153451.a.a.a #15	ENSGT00940000157961.C #16	ENSGT00940000157982.b #17	ENSGT00940000156314 #18	ENSGT00940000160776 #19	ENSGT00390000012679 #20	ENSGT00940000155246 #21	ENSGT00550000074898 #22	ENSGT00940000153704.B #23	ENSGT00940000160397 #24	ENSGT00940000157439 #25	ENSGT00390000000603 #26	ENSGT00940000161315 #27	ENSGT00390000013474.b.a #28	ENSGT00940000161498 #29	ENSGT00940000159590 #30	ENSGT00390000011219 #31	ENSGT00940000154534.a #32	ENSGT00390000000713 #33	ENSGT00390000004405.b #34	ENSGT00950000182892.a.b.a.a #35	ENSGT00940000154152.d.b.dc.b #36	ENSGT00940000160113 #37
Northern American deer mouse	MODERN SPECIES	21	Rpl23 (ENSPEMG00000007476) #7	1700001P01Rik (ENSPEMG00000015931) #8	Cwc25 (ENSPEMG00000000026) #9	Pip4k2b (ENSPEMG00000018039) #10	Psmb3 (ENSPEMG00000011581) #11	Pcgf2 (ENSPEMG00000000237) #12	ENSPEMG00000007333 #13	Mllt6 (ENSPEMG00000015310) #14	Epop (ENSPEMG00000026437) #15	Srcin1 (ENSPEMG00000014663) #16	Arhgap23 (ENSPEMG00000004296) #17	Socs7 (ENSPEMG00000000521) #18	ENSPEMG00000027307 #19	Mrpl45 (ENSPEMG00000005654) #20	Npepps (ENSPEMG00000012220) #21	Kpnb1 (ENSPEMG00000017783) #22	Tbkbp1 (ENSPEMG00000027762) #23	Tbx21 (ENSPEMG00000010056) #24	Osbpl7 (ENSPEMG00000001423) #25	Mrpl10 (ENSPEMG00000014613) #26	Lrrc46 (ENSPEMG00000020507) #27	Scrn2 (ENSPEMG00000020381) #28	Sp6 (ENSPEMG00000001231) #29	Sp2 (ENSPEMG00000017112) #30	Pnpo (ENSPEMG00000025094) #31	Prr15l (ENSPEMG00000024436) #32	ENSPEMG00000030963	Cdk5rap3 (ENSPEMG00000020712) #33	Copz2 (ENSPEMG00000011137) #34	Nfe2l1 (ENSPEMG00000010512) #35	Cbx1 (ENSPEMG00000020976) ##36
Prairie vole	MODERN SPECIES	114	ENSMOCG00000016649 #7	1700001P01Rik (ENSMOCG00000019467) #8	Cwc25 (ENSMOCG00000000224) #9	Pip4k2b (ENSMOCG00000011115) #10	ENSMOCG00000015851 #11	Pcgf2 (ENSMOCG00000021209) #12	Cisd3 (ENSMOCG00000022560) #13	Mllt6 (ENSMOCG00000002332) #14	Epop (ENSMOCG00000020613) #15	Srcin1 (ENSMOCG00000017212) #16	Arhgap23 (ENSMOCG00000005846) #17	Socs7 (ENSMOCG00000015144) #18	ENSMOCG00000022822 #19	Mrpl45 (ENSMOCG00000002139) #20	Npepps (ENSMOCG00000011600) #21	Kpnb1 (ENSMOCG00000003683) #22	Tbkbp1 (ENSMOCG00000017020) #23	Tbx21 (ENSMOCG00000004097) #24	Osbpl7 (ENSMOCG00000021054) #25	Mrpl10 (ENSMOCG00000019451) #26	Lrrc46 (ENSMOCG00000016707) #27	Scrn2 (ENSMOCG00000019511) #28	Sp6 (ENSMOCG00000007065) #29	Sp2 (ENSMOCG00000020935) #30	Pnpo (ENSMOCG00000011655) #31	Prr15l (ENSMOCG00000006695) #32	Cdk5rap3 (ENSMOCG00000019534) #33	Copz2 (ENSMOCG00000022427) #34	Nfe2l1 (ENSMOCG00000016002) #35	Cbx1 (ENSMOCG00000001520) #36	Snx11 (ENSMOCG00000019303) #37
Murinae	ANCESTRAL SPECIES	6	ENSGT00390000004690.a.a.v.yb #7	ENSGT00390000004450 #8	ENSGT00440000039055 #9	ENSGT00940000159874 #10	ENSGT00550000074820.h #11	ENSGT00940000159730 #12	ENSGT00390000004574 #13	ENSGT00940000158572 #14	ENSGT00940000153451.a.a.a #15	ENSGT00940000157961.C #16	ENSGT00940000157982.b #17	ENSGT00940000156314 #18	ENSGT00940000160776 #19	ENSGT00390000012679 #20	ENSGT00940000155246 #21	ENSGT00550000074898 #22	ENSGT00940000153704.B #23	ENSGT00940000160397 #24	ENSGT00940000157439 #25	ENSGT00390000000603 #26	ENSGT00940000161315 #27	ENSGT00390000013474.b.a #28	ENSGT00940000161498 #29	ENSGT00940000159590 #30	ENSGT00390000011219 #31	ENSGT00940000154534.a #32	ENSGT00390000000713 #33	ENSGT00390000004405.b #34	ENSGT00950000182892.a.b.a.a #35	ENSGT00940000154152.d.b.dc.b #36	ENSGT00940000160113 #37
Mus	ANCESTRAL SPECIES	2	ENSGT00390000004450 #8	ENSGT00440000039055 #9	ENSGT00940000159874 #10	ENSGT00550000074820.h #11	ENSGT00940000159730 #12	ENSGT00390000004574 #13	ENSGT00940000158572 #14	ENSGT00940000153451.a.a.a #15	ENSGT00940000157961.C #16	ENSGT00940000157982.b #17	ENSGT00800000125316	ENSGT00940000156314 #18	ENSGT00940000160776 #19	ENSGT00390000012679 #20	ENSGT00940000155246 #21	ENSGT00550000074898 #22	ENSGT00940000153704.B #23	ENSGT00940000160397 #24	ENSGT00940000157439 #25	ENSGT00390000000603 #26	ENSGT00940000161315 #27	ENSGT00390000013474.b.a #28	ENSGT00940000161498 #29	ENSGT00940000159590 #30	ENSGT00390000011219 #31	ENSGT00940000154534.a #32	ENSGT00390000000713 #33	ENSGT00390000004405.b #34	ENSGT00950000182892.a.b.a.a #35	ENSGT00940000153593.c.b.k	ENSGT00940000154152.d.b.dc.b #36
Mus_A	ANCESTRAL SPECIES	2	ENSGT00390000004450 #8	ENSGT00440000039055 #9	ENSGT00940000159874 #10	ENSGT00550000074820.h.p.a #11	ENSGT00940000159730 #12	ENSGT00390000004574 #13	ENSGT00940000158572 #14	ENSGT00940000153451.a.a.a #15	ENSGT00940000157961.C #16	ENSGT00940000157982.b #17	ENSGT00800000125316	ENSGT00940000156314 #18	ENSGT00940000160776 #19	ENSGT00390000012679 #20	ENSGT00940000155246 #21	ENSGT00550000074898 #22	ENSGT00940000153704.B #23	ENSGT00940000160397 #24	ENSGT00940000157439 #25	ENSGT00390000000603 #26	ENSGT00940000161315 #27	ENSGT00390000013474.b.a #28	ENSGT00940000161498 #29	ENSGT00940000159590 #30	ENSGT00390000011219 #31	ENSGT00940000154534.a #32	ENSGT00390000000713 #33	ENSGT00390000004405.b #34	ENSGT00950000182892.a.b.a.a #35	ENSGT00940000153593.c.b.k	ENSGT00940000154152.d.b.dc.b #36
Mus_B	ANCESTRAL SPECIES	2	ENSGT00390000004450 #8	ENSGT00440000039055 #9	ENSGT00940000159874 #10	ENSGT00550000074820.h.p.a #11	ENSGT00940000159730 #12	ENSGT00390000004574 #13	ENSGT00940000158572 #14	ENSGT00940000153451.a.a.a #15	ENSGT00940000157961.C #16	ENSGT00940000157982.b #17	ENSGT00800000125316	ENSGT00940000156314 #18	ENSGT00940000160776 #19	ENSGT00390000012679 #20	ENSGT00940000155246 #21	ENSGT00550000074898 #22	ENSGT00940000153704.B #23	ENSGT00940000160397 #24	ENSGT00940000157439 #25	ENSGT00390000000603 #26	ENSGT00940000161315 #27	ENSGT00390000013474.b.a #28	ENSGT00940000161498 #29	ENSGT00940000159590 #30	ENSGT00390000011219 #31	ENSGT00940000154534.a #32	ENSGT00390000000713 #33	ENSGT00390000004405.b #34	ENSGT00950000182892.a.b.a.a #35	ENSGT00940000153593.c.b.k	ENSGT00940000154152.d.b.dc.b #36
Mus_C	ANCESTRAL SPECIES	3	ENSGT00390000004450 #8	ENSGT00440000039055 #9	ENSGT00940000159874 #10	ENSGT00550000074820.h.p.a #11	ENSGT00940000159730 #12	ENSGT00390000004574 #13	ENSGT00940000158572 #14	ENSGT00940000153451.a.a.a #15	ENSGT00940000157961.C #16	ENSGT00940000157982.b #17	ENSGT00800000125316	ENSGT00940000156314 #18	ENSGT00940000160776 #19	ENSGT00390000012679 #20	ENSGT00940000155246 #21	ENSGT00550000074898 #22	ENSGT00940000153704.B #23	ENSGT00940000160397 #24	ENSGT00940000157439 #25	ENSGT00390000000603 #26	ENSGT00940000161315 #27	ENSGT00390000013474.b.a #28	ENSGT00940000161498 #29	ENSGT00940000159590 #30	ENSGT00390000011219 #31	ENSGT00940000154534.a #32	ENSGT00390000000713 #33	ENSGT00390000004405.b #34	ENSGT00950000182892.a.b.a.a #35	ENSGT00940000153593.c.b.k	ENSGT00940000154152.d.b.dc.b #36
spretus	MODERN SPECIES	2	1700001P01Rik (MGP_SPRETEiJ_G0017911) #8	Cwc25 (MGP_SPRETEiJ_G0017910) #9	Pip4k2b (MGP_SPRETEiJ_G0017909) #10	Psmb3 (MGP_SPRETEiJ_G0017908) #11	Pcgf2 (MGP_SPRETEiJ_G0017907) #12	Cisd3 (MGP_SPRETEiJ_G0017906) #13	Mllt6 (MGP_SPRETEiJ_G0017905) #14	Epop (MGP_SPRETEiJ_G0017904) #15	Srcin1 (MGP_SPRETEiJ_G0017903) #16	MGP_SPRETEiJ_G0017902	Arhgap23 (MGP_SPRETEiJ_G0017901) #17	Socs7 (MGP_SPRETEiJ_G0017900) #18	Gpr179 (MGP_SPRETEiJ_G0017899) #19	Mrpl45 (MGP_SPRETEiJ_G0017898) #20	Npepps (MGP_SPRETEiJ_G0017897) #21	Kpnb1 (MGP_SPRETEiJ_G0017896) #22	Tbkbp1 (MGP_SPRETEiJ_G0017895) #23	Tbx21 (MGP_SPRETEiJ_G0017894) #24	Osbpl7 (MGP_SPRETEiJ_G0017893) #25	Mrpl10 (MGP_SPRETEiJ_G0017892) #26	Lrrc46 (MGP_SPRETEiJ_G0017891) #27	Scrn2 (MGP_SPRETEiJ_G0017890) #28	Sp6 (MGP_SPRETEiJ_G0017889) #29	Sp2 (MGP_SPRETEiJ_G0017888) #30	Pnpo (MGP_SPRETEiJ_G0017887) #31	Prr15l (MGP_SPRETEiJ_G0017886) #32	Cdk5rap3 (MGP_SPRETEiJ_G0017885) #33	Copz2 (MGP_SPRETEiJ_G0017884) #34	Nfe2l1 (MGP_SPRETEiJ_G0017883) #35	MGP_SPRETEiJ_G0017882	Cbx1 (MGP_SPRETEiJ_G0017881) #36
Steppe mouse	MODERN SPECIES	3291	1700001P01Rik (ENSMSIG00000017116) #8	Cwc25 (ENSMSIG00000017131) #9	Pip4k2b (ENSMSIG00000017192) #10	Psmb3 (ENSMSIG00000017213) #11	Pcgf2 (ENSMSIG00000017227) #12	Cisd3 (ENSMSIG00000017247) #13	Mllt6 (ENSMSIG00000017258) #14	Epop (ENSMSIG00000017344) #15	Srcin1 (ENSMSIG00000017360) #16	Arhgap23 (ENSMSIG00000017701) #17	ENSMSIG00000017794	Socs7 (ENSMSIG00000017810) #18	Gpr179 (ENSMSIG00000017852) #19	Mrpl45 (ENSMSIG00000017873) #20	Npepps (ENSMSIG00000017886) #21	Kpnb1 (ENSMSIG00000017971) #22	Tbkbp1 (ENSMSIG00000018040) #23	Tbx21 (ENSMSIG00000018069) #24	Osbpl7 (ENSMSIG00000018093) #25	Mrpl10 (ENSMSIG00000018160) #26	Lrrc46 (ENSMSIG00000018171) #27	Scrn2 (ENSMSIG00000018202) #28	Sp6 (ENSMSIG00000018223) #29	Sp2 (ENSMSIG00000018237) #30	ENSMSIG00000018267 #31	ENSMSIG00000018270 #32	Cdk5rap3 (ENSMSIG00000018309) #33	Copz2 (ENSMSIG00000018337) #34	Nfe2l1 (ENSMSIG00000018374) #35	Cbx1 (ENSMSIG00000018447) #36	ENSMSIG00000018520
Mouse	MODERN SPECIES	2	Rpl23 (ENSMUSG00000071415) #7	1700001P01Rik (ENSMUSG00000018543) #8	Cwc25 (ENSMUSG00000018541) #9	Pip4k2b (ENSMUSG00000018547) #10	Psmb3 (ENSMUSG00000069744) #11	Pcgf2 (ENSMUSG00000018537) #12	Cisd3 (ENSMUSG00000078695) #13	Mllt6 (ENSMUSG00000038437) #14	Epop (ENSMUSG00000043439) #15	Srcin1 (ENSMUSG00000038453) #16	Arhgap23 (ENSMUSG00000049807) #17	Socs7 (ENSMUSG00000038485) #18	Gpr179 (ENSMUSG00000070337) #19	Mrpl45 (ENSMUSG00000018882) #20	Npepps (ENSMUSG00000001441) #21	Kpnb1 (ENSMUSG00000001440) #22	Tbkbp1 (ENSMUSG00000038517) #23	Tbx21 (ENSMUSG00000001444) #24	Osbpl7 (ENSMUSG00000038534) #25	Mrpl10 (ENSMUSG00000001445) #26	Lrrc46 (ENSMUSG00000020878) #27	Scrn2 (ENSMUSG00000020877) #28	Sp6 (ENSMUSG00000038560) #29	Sp2 (ENSMUSG00000018678) #30	Pnpo (ENSMUSG00000018659) #31	Prr15l (ENSMUSG00000047040) #32	Cdk5rap3 (ENSMUSG00000018669) #33	Copz2 (ENSMUSG00000018672) #34	Nfe2l1 (ENSMUSG00000038615) #35	Cbx1 (ENSMUSG00000018666) #36	Snx11 (ENSMUSG00000020876) #37
Ryukyu mouse	MODERN SPECIES	2	1700001P01Rik (MGP_CAROLIEiJ_G0017065) #8	Cwc25 (MGP_CAROLIEiJ_G0017064) #9	Pip4k2b (MGP_CAROLIEiJ_G0017063) #10	MGP_CAROLIEiJ_G0017062 #11	Pcgf2 (MGP_CAROLIEiJ_G0017061) #12	Cisd3 (MGP_CAROLIEiJ_G0017060) #13	Mllt6 (MGP_CAROLIEiJ_G0017059) #14	Epop (MGP_CAROLIEiJ_G0017058) #15	Srcin1 (MGP_CAROLIEiJ_G0017057) #16	MGP_CAROLIEiJ_G0017056	Arhgap23 (MGP_CAROLIEiJ_G0017055) #17	Socs7 (MGP_CAROLIEiJ_G0017054) #18	Gpr179 (MGP_CAROLIEiJ_G0017053) #19	Mrpl45 (MGP_CAROLIEiJ_G0017052) #20	Npepps (MGP_CAROLIEiJ_G0017051) #21	Kpnb1 (MGP_CAROLIEiJ_G0017050) #22	Tbkbp1 (MGP_CAROLIEiJ_G0017049) #23	Tbx21 (MGP_CAROLIEiJ_G0017048) #24	Osbpl7 (MGP_CAROLIEiJ_G0017047) #25	Mrpl10 (MGP_CAROLIEiJ_G0017046) #26	Lrrc46 (MGP_CAROLIEiJ_G0017045) #27	MGP_CAROLIEiJ_G0017044 #28	Sp6 (MGP_CAROLIEiJ_G0017043) #29	Sp2 (MGP_CAROLIEiJ_G0017042) #30	Pnpo (MGP_CAROLIEiJ_G0017041) #31	Prr15l (MGP_CAROLIEiJ_G0017040) #32	Cdk5rap3 (MGP_CAROLIEiJ_G0017039) #33	Copz2 (MGP_CAROLIEiJ_G0017038) #34	Nfe2l1 (MGP_CAROLIEiJ_G0017037) #35	MGP_CAROLIEiJ_G0017036	Cbx1 (MGP_CAROLIEiJ_G0017035) #36
Rat	MODERN SPECIES	1	LOC691189 (ENSRNOG00000036888) #8	Cwc25 (ENSRNOG00000004091) #9	Pip4k2b (ENSRNOG00000013030) #10	Psmb3 (ENSRNOG00000052730) #11	Pcgf2 (ENSRNOG00000012705) #12	Cisd3 (ENSRNOG00000036894) #13	Mllt6 (ENSRNOG00000053285) #14	Epop (ENSRNOG00000048187) #15	Srcin1 (ENSRNOG00000011475) #16	Arhgap23 (ENSRNOG00000022771) #17	Socs7 (ENSRNOG00000059008) #18	Gpr179 (ENSRNOG00000029245) #19	Mrpl45 (ENSRNOG00000010540) #20	Npepps (ENSRNOG00000023095) #21	AABR07030425.1 (ENSRNOG00000056057)	Kpnb1 (ENSRNOG00000009275) #22	Tbkbp1 (ENSRNOG00000009370) #23	Tbx21 (ENSRNOG00000009427) #24	Osbpl7 (ENSRNOG00000009473) #25	Mrpl10 (ENSRNOG00000009567) #26	Lrrc46 (ENSRNOG00000009902) #27	Scrn2 (ENSRNOG00000010214) #28	Sp6 (ENSRNOG00000023551) #29	Sp2 (ENSRNOG00000010492) #30	Pnpo (ENSRNOG00000046493) #31	Prr15l (ENSRNOG00000049162) #32	Cdk5rap3 (ENSRNOG00000048747) #33	Copz2 (ENSRNOG00000009225) #34	Nfe2l1 (ENSRNOG00000008830) #35	Cbx1 (ENSRNOG00000008689) #36	Snx11 (ENSRNOG00000008642) #37
Upper Galilee mountains blind mole rat	MODERN SPECIES	1028	Fam187a (ENSNGAG00000012343)	Gfap (ENSNGAG00000018596)	Kif18b (ENSNGAG00000021669)	C1ql1 (ENSNGAG00000021352)	Dcakd (ENSNGAG00000021561)	Nmt1 (ENSNGAG00000023149)	Plcd3 (ENSNGAG00000022130)	Acbd4 (ENSNGAG00000003147)	Hexim1 (ENSNGAG00000004671)	Hexim2 (ENSNGAG00000008154)	Fmnl1 (ENSNGAG00000018866)	Efcab15 (ENSNGAG00000014012)	Map3k14 (ENSNGAG00000018057)	Arhgap27 (ENSNGAG00000021239)	Plekhm1 (ENSNGAG00000013194)	Kpnb1 (ENSNGAG00000017610) #22	Tbkbp1 (ENSNGAG00000021163) #23	Tbx21 (ENSNGAG00000002476) #24	Osbpl7 (ENSNGAG00000019382) #25	Mrpl10 (ENSNGAG00000022195) #26	Lrrc46 (ENSNGAG00000022557) #27	Scrn2 (ENSNGAG00000023806) #28	Sp6 (ENSNGAG00000015868) #29	Sp2 (ENSNGAG00000017612) #30	Pnpo (ENSNGAG00000020016) #31	Prr15l (ENSNGAG00000021432) #32	ENSNGAG00000022529	ENSNGAG00000000747 #33	Copz2 (ENSNGAG00000023713) #34	Nfe2l1 (ENSNGAG00000000736) #35	Cbx1 (ENSNGAG00000006760) #36
Lesser Egyptian jerboa	MODERN SPECIES	56	1700001P01Rik (ENSJJAG00000010099) #8	ENSJJAG00000023173	Cwc25 (ENSJJAG00000003109) #9	Pip4k2b (ENSJJAG00000023362) #10	ENSJJAG00000023648 #11	ENSJJAG00000010754 #12	Cisd3 (ENSJJAG00000023230) #13	Mllt6 (ENSJJAG00000000902) #14	Epop (ENSJJAG00000023234) #15	Srcin1 (ENSJJAG00000000573) #16	ENSJJAG00000002946 #17	Socs7 (ENSJJAG00000007563) #18	ENSJJAG00000002004 #19	ENSJJAG00000009505	Npepps (ENSJJAG00000005423) #21	Kpnb1 (ENSJJAG00000010909) #22	ENSJJAG00000010141 #23	Tbx21 (ENSJJAG00000000813) #24	Osbpl7 (ENSJJAG00000004477) #25	Mrpl10 (ENSJJAG00000004046) #26	Lrrc46 (ENSJJAG00000010412) #27	Scrn2 (ENSJJAG00000023635) #28	Sp6 (ENSJJAG00000006452) #29	Sp2 (ENSJJAG00000003061) #30	Pnpo (ENSJJAG00000023608) #31	Prr15l (ENSJJAG00000006478) #32	ENSJJAG00000002511 #33	Copz2 (ENSJJAG00000001025) #34	Nfe2l1 (ENSJJAG00000006432) #35	ENSJJAG00000007753 ##36	ENSJJAG00000005754 #37
Lagomorpha	ANCESTRAL SPECIES		ENSGT00940000154775.c.a	ENSGT00390000004690.a.a.v #7	ENSGT00390000004450 #8	ENSGT00440000039055 #9	ENSGT00940000159874 #10	ENSGT00550000074820.h #11	ENSGT00940000159730 #12	ENSGT00390000004574 #13	ENSGT00940000158572 #14	ENSGT00940000157961.C #16	ENSGT00940000157982.b #17	ENSGT00940000156314 #18	ENSGT00940000160776 #19	ENSGT00390000012679 #20	ENSGT00940000155246 #21	ENSGT00550000074898 #22	ENSGT00940000153704.B #23	ENSGT00940000160397 #24	ENSGT00940000157439 #25	ENSGT00390000000603 #26	ENSGT00940000161315 #27	ENSGT00390000013474.b.a #28	ENSGT00940000161498 #29	ENSGT00940000159590 #30	ENSGT00390000011219 #31	ENSGT00940000154534.a #32	ENSGT00390000000713 #33	ENSGT00390000004405.b #34	ENSGT00950000182892.a.b.a.a #35	ENSGT00940000154152.d.b.dc #36	ENSGT00940000160113 #37
Rabbit	MODERN SPECIES	10	LASP1 (ENSOCUG00000021796)	RPL23 (ENSOCUG00000013915) #7	C17orf98 (ENSOCUG00000024834) #8	CWC25 (ENSOCUG00000013906) #9	PIP4K2B (ENSOCUG00000015916) #10	PSMB3 (ENSOCUG00000002598) #11	PCGF2 (ENSOCUG00000026783) #12	CISD3 (ENSOCUG00000022623) #13	MLLT6 (ENSOCUG00000027604) #14	SRCIN1 (ENSOCUG00000005505) #16	ARHGAP23 (ENSOCUG00000011758) #17	SOCS7 (ENSOCUG00000015724) #18	GPR179 (ENSOCUG00000015704) #19	MRPL45 (ENSOCUG00000015690) #20	NPEPPS (ENSOCUG00000015748) #21	KPNB1 (ENSOCUG00000015425) #22	TBKBP1 (ENSOCUG00000014771) #23	TBX21 (ENSOCUG00000012907) #24	OSBPL7 (ENSOCUG00000009447) #25	MRPL10 (ENSOCUG00000009452) #26	LRRC46 (ENSOCUG00000009453) #27	SCRN2 (ENSOCUG00000009457) #28	SP6 (ENSOCUG00000023482) #29	SP2 (ENSOCUG00000027415) #30	PNPO (ENSOCUG00000017484) #31	PRR15L (ENSOCUG00000017489) #32	CDK5RAP3 (ENSOCUG00000012325) #33	COPZ2 (ENSOCUG00000001802) #34	NFE2L1 (ENSOCUG00000022298) #35	CBX1 (ENSOCUG00000008021) #36	SNX11 (ENSOCUG00000002309) #37
Pika	MODERN SPECIES	633															NPEPPS (ENSOPRG00000003735) #21	KPNB1 (ENSOPRG00000003795) #22	TBKBP1 (ENSOPRG00000003843) #23	TBX21 (ENSOPRG00000003888) #24	OSBPL7 (ENSOPRG00000003904) #25	MRPL10 (ENSOPRG00000003949) #26	LRRC46 (ENSOPRG00000003963) #27	SCRN2 (ENSOPRG00000003992) #28	SP6 (ENSOPRG00000004019) #29	SP2 (ENSOPRG00000004048) #30	PNPO (ENSOPRG00000004080) #31	CDK5RAP3 (ENSOPRG00000004107) #33
Tree shrew	MODERN SPECIES	255																KPNB1 (ENSTBEG00000010552) #22	TBKBP1 (ENSTBEG00000010673) #23