Artiodactyla	ANCESTRAL SPECIES	4	ENSGT00940000159874 #10	ENSGT00550000074820.h #11	ENSGT00940000159730	ENSGT00390000004574 #12	ENSGT00550000076427	ENSGT00940000158572 #13	ENSGT00940000153451.a.a.a #15	ENSGT00860000135964	ENSGT00940000157961.C #16	ENSGT00930000153020	ENSGT00940000157982.b #17	ENSGT00940000156314 #18	ENSGT00940000160776 #19	ENSGT00390000012679 #20	ENSGT00940000155246 #21	ENSGT00550000074898 #22	ENSGT00940000153704.B #23	ENSGT00940000160397 #24	ENSGT00940000157439 #25	ENSGT00390000000603 #26	ENSGT00940000161315 #27	ENSGT00390000013474.b.a #28	ENSGT00940000161498 #29	ENSGT00940000159590 #30	ENSGT00390000011219 #31	ENSGT00940000154534.a #32	ENSGT00390000000713 #33	ENSGT00390000004405.b #34	ENSGT00950000185410	ENSGT00950000182892.a.b.a.a #35	ENSGT00940000154152.d.b #36
Artiodactyla_a	ANCESTRAL SPECIES	3	ENSGT00940000159874 #10	ENSGT00550000074820.h #11	ENSGT00940000159730	ENSGT00390000004574 #12	ENSGT00550000076427	ENSGT00940000158572 #13	ENSGT00940000153451.a.a.a #15	ENSGT00860000135964	ENSGT00940000157961.C #16	ENSGT00930000153020	ENSGT00940000157982.b #17	ENSGT00940000156314 #18	ENSGT00940000160776 #19	ENSGT00390000012679 #20	ENSGT00940000155246 #21	ENSGT00550000074898 #22	ENSGT00940000153704.B #23	ENSGT00940000160397 #24	ENSGT00940000157439 #25	ENSGT00390000000603 #26	ENSGT00940000161315 #27	ENSGT00390000013474.b.a #28	ENSGT00940000161498 #29	ENSGT00940000159590 #30	ENSGT00390000011219 #31	ENSGT00940000154534.a #32	ENSGT00390000000713 #33	ENSGT00390000004405.b #34	ENSGT00950000185410	ENSGT00950000182892.a.b.a.a #35	ENSGT00940000154152.d.b #36
Artiodactyla_b	ANCESTRAL SPECIES	3	ENSGT00440000039055 #9	ENSGT00940000159874 #10	ENSGT00550000074820.h #11	ENSGT00940000159730	ENSGT00390000004574 #12	ENSGT00940000158572 #13	ENSGT00940000153451.a.a.a #15	ENSGT00860000135964	ENSGT00940000157961.C #16	ENSGT00930000153020	ENSGT00940000157982.b #17	ENSGT00940000156314 #18	ENSGT00940000160776 #19	ENSGT00390000012679 #20	ENSGT00940000155246 #21	ENSGT00550000074898 #22	ENSGT00940000153704.B #23	ENSGT00940000160397 #24	ENSGT00940000157439 #25	ENSGT00390000000603 #26	ENSGT00940000161315 #27	ENSGT00390000013474.b.a #28	ENSGT00940000161498 #29	ENSGT00940000159590 #30	ENSGT00390000011219 #31	ENSGT00940000154534.a #32	ENSGT00390000000713 #33	ENSGT00950000185410	ENSGT00390000004405.b #34	ENSGT00950000182892.a.b.a.a #35	ENSGT00940000154152.d.b #36
Pecora	ANCESTRAL SPECIES	1	ENSGT00440000039055 #9	ENSGT00940000159874 #10	ENSGT00550000074820.h #11	ENSGT00940000159730	ENSGT00390000004574 #12	ENSGT00940000158572 #13	ENSGT00940000153451.a.a.a #15	ENSGT00860000135964	ENSGT00940000157961.C #16	ENSGT00930000153020	ENSGT00940000157982.b #17	ENSGT00940000156314 #18	ENSGT00940000160776 #19	ENSGT00390000012679 #20	ENSGT00940000155246 #21	ENSGT00550000074898 #22	ENSGT00940000153704.B #23	ENSGT00940000160397 #24	ENSGT00940000157439 #25	ENSGT00390000000603 #26	ENSGT00940000161315 #27	ENSGT00390000013474.b.a #28	ENSGT00940000161498 #29	ENSGT00940000159590 #30	ENSGT00390000011219 #31	ENSGT00940000154534.a #32	ENSGT00390000000713 #33	ENSGT00950000185410	ENSGT00390000004405.b #34	ENSGT00950000182892.a.b.a.a #35	ENSGT00940000154152.d.b #36
Percora_a	ANCESTRAL SPECIES	2	ENSGT00440000039055 #9	ENSGT00940000159874 #10	ENSGT00550000074820.h #11	ENSGT00940000159730	ENSGT00390000004574 #12	ENSGT00940000158572 #13	ENSGT00940000153451.a.a.a #15	ENSGT00860000135964	ENSGT00940000157961.C #16	ENSGT00930000153020	ENSGT00940000157982.b #17	ENSGT00940000156314 #18	ENSGT00940000160776 #19	ENSGT00390000012679 #20	ENSGT00940000155246 #21	ENSGT00550000074898 #22	ENSGT00940000153704.B #23	ENSGT00940000160397 #24	ENSGT00940000157439 #25	ENSGT00390000000603 #26	ENSGT00940000161315 #27	ENSGT00390000013474.b.a #28	ENSGT00940000161498 #29	ENSGT00940000159590 #30	ENSGT00390000011219 #31	ENSGT00940000154534.a #32	ENSGT00390000000713 #33	ENSGT00390000004405.b #34	ENSGT00950000182892.a.b.a.a #35	ENSGT00940000154152.d.b #36	ENSGT00940000160113 #37
Bovidae	ANCESTRAL SPECIES	2	ENSGT00440000039055 #9	ENSGT00940000159874 #10	ENSGT00550000074820.h #11	ENSGT00940000159730	ENSGT00390000004574.e #12	ENSGT00940000158572 #13	ENSGT00940000153451.a.a.a #15	ENSGT00860000135964	ENSGT00940000157961.C #16	ENSGT00930000153020	ENSGT00940000157982.b #17	ENSGT00940000156314 #18	ENSGT00940000160776 #19	ENSGT00390000012679 #20	ENSGT00940000155246 #21	ENSGT00550000074898 #22	ENSGT00940000153704.B #23	ENSGT00940000160397 #24	ENSGT00940000157439 #25	ENSGT00390000000603 #26	ENSGT00940000161315 #27	ENSGT00390000013474.b.a #28	ENSGT00940000161498 #29	ENSGT00940000159590 #30	ENSGT00390000011219 #31	ENSGT00940000154534.a #32	ENSGT00390000000713 #33	ENSGT00390000004405.b #34	ENSGT00950000182892.a.b.a.a #35	ENSGT00940000154152.d.b #36	ENSGT00940000160113 #37
Caprinae	ANCESTRAL SPECIES	1	ENSGT00390000004690.a.a.v	ENSGT00390000004450	ENSGT00440000039055 #9	ENSGT00940000159874 #10	ENSGT00550000074820.h #11	ENSGT00940000159730	ENSGT00390000004574.e #12	ENSGT00940000158572 #13	ENSGT00940000153451.a.a.a #15	ENSGT00940000157961.C #16	ENSGT00940000157982.b #17	ENSGT00940000156314 #18	ENSGT00940000160776 #19	ENSGT00390000012679 #20	ENSGT00940000155246 #21	ENSGT00550000074898 #22	ENSGT00940000153704.B #23	ENSGT00940000160397 #24	ENSGT00940000157439 #25	ENSGT00390000000603 #26	ENSGT00940000161315 #27	ENSGT00390000013474.b.a #28	ENSGT00940000161498 #29	ENSGT00940000159590 #30	ENSGT00390000011219 #31	ENSGT00940000154534.a #32	ENSGT00390000000713 #33	ENSGT00390000004405.b #34	ENSGT00950000182892.a.b.a.a #35	ENSGT00940000154152.d.b #36	ENSGT00940000160113 #37
Rambouillet Sheep	MODERN SPECIES	2	ENSOARG00020017386 #7	ENSOARG00020017464 #8	CWC25 (ENSOARG00020017627) #9	PIP4K2B (ENSOARG00020017738) #10	PSMB3 (ENSOARG00020017862) #11	ENSOARG00020017987 #12	MLLT6 (ENSOARG00020018035) #13	ENSOARG00020018283 #14	ENSOARG00020018303 #15	SRCIN1 (ENSOARG00020018349) #16	ARHGAP23 (ENSOARG00020019239) #17	SOCS7 (ENSOARG00020019553) #18	GPR179 (ENSOARG00020019685) #19	MRPL45 (ENSOARG00020019879) #20	NPEPPS (ENSOARG00020020009) #21	KPNB1 (ENSOARG00020020287) #22	TBKBP1 (ENSOARG00020020372) #23	TBX21 (ENSOARG00020020433) #24	OSBPL7 (ENSOARG00020020494) #25	MRPL10 (ENSOARG00020020614) #26	LRRC46 (ENSOARG00020020663) #27	SCRN2 (ENSOARG00020020770) #28	SP6 (ENSOARG00020020944) #29	SP2 (ENSOARG00020020972) #30	PNPO (ENSOARG00020021017) #31	PRR15L (ENSOARG00020021319) #32	CDK5RAP3 (ENSOARG00020021339) #33	COPZ2 (ENSOARG00020021377) #34	NFE2L1 (ENSOARG00020021460) #35	CBX1 (ENSOARG00020021741) #36	SNX11 (ENSOARG00020021783) #37
Goat	MODERN SPECIES	10	C17orf98 (ENSCHIG00000010304)	CWC25 (ENSCHIG00000015063) #9	PIP4K2B (ENSCHIG00000022865) #10	PSMB3 (ENSCHIG00000012081) #11	PCGF2 (ENSCHIG00000018902)	ENSCHIG00000002051 #12	MLLT6 (ENSCHIG00000019829) #13	EPOP (ENSCHIG00000008501) #15	ENSCHIG00000019374	SRCIN1 (ENSCHIG00000022297) #16	ARHGAP23 (ENSCHIG00000023996) #17	SOCS7 (ENSCHIG00000012449) #18	GPR179 (ENSCHIG00000026098) #19	MRPL45 (ENSCHIG00000014110) #20	NPEPPS (ENSCHIG00000022782) #21	KPNB1 (ENSCHIG00000014896) #22	TBKBP1 (ENSCHIG00000016860) #23	TBX21 (ENSCHIG00000021993) #24	OSBPL7 (ENSCHIG00000023060) #25	MRPL10 (ENSCHIG00000027033) #26	LRRC46 (ENSCHIG00000015497) #27	SCRN2 (ENSCHIG00000026802) #28	SP6 (ENSCHIG00000009897) #29	SP2 (ENSCHIG00000018648) #30	PNPO (ENSCHIG00000004606) #31	PRR15L (ENSCHIG00000008261) #32	CDK5RAP3 (ENSCHIG00000025420) #33	COPZ2 (ENSCHIG00000026544) #34	NFE2L1 (ENSCHIG00000015427) #35	CBX1 (ENSCHIG00000010985) #36	SNX11 (ENSCHIG00000017547) #37
Bovinae	ANCESTRAL SPECIES		ENSGT00940000159874 #10	ENSGT00550000074820.h #11	ENSGT00940000159730	ENSGT00390000004574.e #12	ENSGT00940000158572 #13	ENSGT00940000153451.a.a.a #15	ENSGT00860000135964	ENSGT00940000157961.C #16	ENSGT00930000153020	ENSGT00940000157982.b #17	ENSGT00940000156314 #18	ENSGT00940000160776 #19	ENSGT00390000012679 #20	ENSGT00960000190232	ENSGT00940000155246 #21	ENSGT00550000074898 #22	ENSGT00940000153704.B #23	ENSGT00940000160397 #24	ENSGT00940000157439 #25	ENSGT00390000000603 #26	ENSGT00940000161315 #27	ENSGT00390000013474.b.a #28	ENSGT00940000161498 #29	ENSGT00940000159590 #30	ENSGT00390000011219 #31	ENSGT00940000154534.a #32	ENSGT00390000000713 #33	ENSGT00390000004405.b #34	ENSGT00950000182892.a.b.a.a #35	ENSGT00940000154152.d.b #36	ENSGT00940000160113 #37
Bos	ANCESTRAL SPECIES	1	ENSGT00940000159874 #10	ENSGT00550000074820.h #11	ENSGT00940000159730	ENSGT00390000004574.e #12	ENSGT00940000158572 #13	ENSGT00940000153451.a.a.a #15	ENSGT00860000135964	ENSGT00940000157961.C #16	ENSGT00930000153020	ENSGT00940000157982.b #17	ENSGT00940000156314 #18	ENSGT00940000160776 #19	ENSGT00960000190232	ENSGT00390000012679 #20	ENSGT00940000155246 #21	ENSGT00550000074898 #22	ENSGT00940000153704.B #23	ENSGT00940000160397 #24	ENSGT00940000157439 #25	ENSGT00390000000603 #26	ENSGT00940000161315 #27	ENSGT00390000013474.b.a #28	ENSGT00940000161498 #29	ENSGT00940000159590.e.b #30	ENSGT00390000011219 #31	ENSGT00940000154534.a #32	ENSGT00390000000713 #33	ENSGT00390000004405.b #34	ENSGT00950000182892.a.b.a.a #35	ENSGT00940000154152.d.b.i #36	ENSGT00940000160113 #37
Bos_b	ANCESTRAL SPECIES	15	ENSGT00440000039055 #9	ENSGT00940000159874 #10	ENSGT00550000074820.h #11	ENSGT00940000159730	ENSGT00390000004574.e #12	ENSGT00940000158572 #13	ENSGT00940000153451.a.a.a #15	ENSGT00860000135964	ENSGT00940000157961.C #16	ENSGT00940000157982.b #17	ENSGT00940000156314 #18	ENSGT00940000160776 #19	ENSGT00960000190232	ENSGT00390000012679 #20	ENSGT00940000155246 #21	ENSGT00550000074898 #22	ENSGT00940000153704.B #23	ENSGT00940000160397 #24	ENSGT00940000157439 #25	ENSGT00390000000603 #26	ENSGT00940000161315 #27	ENSGT00390000013474.b.a #28	ENSGT00940000161498 #29	ENSGT00940000159590.e.b #30	ENSGT00390000011219 #31	ENSGT00940000154534.a #32	ENSGT00390000000713 #33	ENSGT00390000004405.b #34	ENSGT00950000182892.a.b.a.a #35	ENSGT00940000154152.d.b.i #36	ENSGT00940000160113 #37
Cow	MODERN SPECIES	10	CWC25 (ENSBTAG00000030591) #9	PIP4K2B (ENSBTAG00000006499) #10	PSMB3 (ENSBTAG00000003830) #11	PCGF2 (ENSBTAG00000011539)	CISD3 (ENSBTAG00000046569) #12	MLLT6 (ENSBTAG00000011532) #13	EPOP (ENSBTAG00000048067) #15	ENSBTAG00000053767	SRCIN1 (ENSBTAG00000013469) #16	ARHGAP23 (ENSBTAG00000016911) #17	SOCS7 (ENSBTAG00000008535) #18	GPR179 (ENSBTAG00000001804) #19	ENSBTAG00000049522	MRPL45 (ENSBTAG00000025001) #20	NPEPPS (ENSBTAG00000011435) #21	KPNB1 (ENSBTAG00000006586) #22	TBKBP1 (ENSBTAG00000011280) #23	TBX21 (ENSBTAG00000014199) #24	OSBPL7 (ENSBTAG00000013523) #25	MRPL10 (ENSBTAG00000001832) #26	LRRC46 (ENSBTAG00000001830) #27	SCRN2 (ENSBTAG00000001828) #28	SP6 (ENSBTAG00000001825) #29	SP2 (ENSBTAG00000013740) #30	PNPO (ENSBTAG00000012259) #31	PRR15L (ENSBTAG00000012249) #32	CDK5RAP3 (ENSBTAG00000014202) #33	COPZ2 (ENSBTAG00000039954) #34	NFE2L1 (ENSBTAG00000013653) #35	CBX1 (ENSBTAG00000002949) #36	SNX11 (ENSBTAG00000020321) #37
Hybrid Bos Indicus	MODERN SPECIES	10	LASP1 (ENSBIXG00005030708)	ENSBIXG00005030673	CWC25 (ENSBIXG00005030655) #9	PSMB3 (ENSBIXG00005030631) #11	PIP4K2B (ENSBIXG00005030579) #10	CISD3 (ENSBIXG00005030560) #12	MLLT6 (ENSBIXG00005030533) #13	EPOP (ENSBIXG00005030515) #15	SRCIN1 (ENSBIXG00005030456) #16	ARHGAP23 (ENSBIXG00005030331) #17	SOCS7 (ENSBIXG00005030269) #18	GPR179 (ENSBIXG00005030235) #19	ENSBIXG00005030228	MRPL45 (ENSBIXG00005030219) #20	NPEPPS (ENSBIXG00005030159) #21	KPNB1 (ENSBIXG00005030131) #22	TBKBP1 (ENSBIXG00005030097) #23	TBX21 (ENSBIXG00005030084) #24	OSBPL7 (ENSBIXG00005030039) #25	MRPL10 (ENSBIXG00005030023) #26	LRRC46 (ENSBIXG00005030008) #27	SCRN2 (ENSBIXG00005029976) #28	SP6 (ENSBIXG00005029948) #29	ENSBIXG00005029934 #30	PNPO (ENSBIXG00005029918) #31	PRR15L (ENSBIXG00005029905) #32	CDK5RAP3 (ENSBIXG00005029886) #33	COPZ2 (ENSBIXG00005029862) #34	NFE2L1 (ENSBIXG00005029748) #35	CBX1 (ENSBIXG00005029691) #36	SNX11 (ENSBIXG00005029679) #37
Bos_a	ANCESTRAL SPECIES		ENSGT00940000159874 #10	ENSGT00550000074820.h #11	ENSGT00940000159730	ENSGT00390000004574.e #12	ENSGT00940000158572 #13	ENSGT00940000153451.a.a.a #15	ENSGT00860000135964	ENSGT00940000157961.C #16	ENSGT00930000153020	ENSGT00940000157982.b #17	ENSGT00940000156314 #18	ENSGT00940000160776 #19	ENSGT00960000190232	ENSGT00390000012679 #20	ENSGT00940000155246 #21	ENSGT00550000074898 #22	ENSGT00940000153704.B #23	ENSGT00940000160397 #24	ENSGT00940000157439 #25	ENSGT00390000000603 #26	ENSGT00940000161315 #27	ENSGT00390000013474.b.a #28	ENSGT00940000161498 #29	ENSGT00940000159590.e.b #30	ENSGT00390000011219 #31	ENSGT00940000154534.a #32	ENSGT00390000000713 #33	ENSGT00390000004405.b #34	ENSGT00950000182892.a.b.a.a #35	ENSGT00940000154152.d.b.i #36	ENSGT00940000160113 #37
Domestic yak	MODERN SPECIES	10	CWC25 (ENSBGRG00000014504) #9	PIP4K2B (ENSBGRG00000014718) #10	PSMB3 (ENSBGRG00000014781) #11	PCGF2 (ENSBGRG00000014863)	CISD3 (ENSBGRG00000014924) #12	MLLT6 (ENSBGRG00000015018) #13	EPOP (ENSBGRG00000015572) #15	SRCIN1 (ENSBGRG00000015645) #16	ENSBGRG00000016987	ARHGAP23 (ENSBGRG00000017050) #17	SOCS7 (ENSBGRG00000017476) #18	ENSBGRG00000017816 #19	MRPL45 (ENSBGRG00000017975) #20	ENSBGRG00000018222	NPEPPS (ENSBGRG00000018276) #21	KPNB1 (ENSBGRG00000018571) #22	TBKBP1 (ENSBGRG00000019067) #23	TBX21 (ENSBGRG00000019171) #24	OSBPL7 (ENSBGRG00000019260) #25	MRPL10 (ENSBGRG00000019422) #26	LRRC46 (ENSBGRG00000019490) #27	SCRN2 (ENSBGRG00000019672) #28	SP6 (ENSBGRG00000019744) #29	ENSBGRG00000019774 #30	PNPO (ENSBGRG00000019898) #31	ENSBGRG00000020194 #32	CDK5RAP3 (ENSBGRG00000020283) #33	COPZ2 (ENSBGRG00000020574) #34	NFE2L1 (ENSBGRG00000020783) #35	CBX1 (ENSBGRG00000021062) #36	SNX11 (ENSBGRG00000021141) #37
Wild yak	MODERN SPECIES	953	CWC25 (ENSBMUG00000001434) #9	PIP4K2B (ENSBMUG00000001415) #10	PSMB3 (ENSBMUG00000001393) #11	PCGF2 (ENSBMUG00000001349)	CISD3 (ENSBMUG00000001326) #12	MLLT6 (ENSBMUG00000001313) #13	EPOP (ENSBMUG00000001299) #15	ENSBMUG00000001292	SRCIN1 (ENSBMUG00000001263) #16	ARHGAP23 (ENSBMUG00000001176) #17	SOCS7 (ENSBMUG00000001131) #18	GPR179 (ENSBMUG00000001100) #19	ENSBMUG00000001086	MRPL45 (ENSBMUG00000001074) #20	NPEPPS (ENSBMUG00000001034) #21	KPNB1 (ENSBMUG00000000951) #22	TBKBP1 (ENSBMUG00000000913) #23	TBX21 (ENSBMUG00000000904) #24	OSBPL7 (ENSBMUG00000000874) #25	MRPL10 (ENSBMUG00000000829) #26	LRRC46 (ENSBMUG00000000816) #27	SCRN2 (ENSBMUG00000000797) #28	SP6 (ENSBMUG00000000772) #29
American bison	MODERN SPECIES	3101	C17orf98 (ENSBBBG00000008309)	CWC25 (ENSBBBG00000022574) #9	PIP4K2B (ENSBBBG00000022547) #10	PSMB3 (ENSBBBG00000022529) #11	PCGF2 (ENSBBBG00000022514)	CISD3 (ENSBBBG00000022480) #12	MLLT6 (ENSBBBG00000008844) #13	SRCIN1 (ENSBBBG00000022427) #16	ENSBBBG00000022356	ENSBBBG00000005896 #17	SOCS7 (ENSBBBG00000005889) #18	ENSBBBG00000005882 #19	MRPL45 (ENSBBBG00000022294) #20	ENSBBBG00000022252	NPEPPS (ENSBBBG00000022236) #21	KPNB1 (ENSBBBG00000022131) #22	ENSBBBG00000022076 #23	TBX21 (ENSBBBG00000005826) #24	OSBPL7 (ENSBBBG00000022056) #25	MRPL10 (ENSBBBG00000021983) #26	LRRC46 (ENSBBBG00000021972) #27	SCRN2 (ENSBBBG00000021958) #28	SP6 (ENSBBBG00000021924) #29	SP2 (ENSBBBG00000021914) #30	PNPO (ENSBBBG00000021862) #31	PRR15L (ENSBBBG00000021809) #32	CDK5RAP3 (ENSBBBG00000021808) #33	COPZ2 (ENSBBBG00000021782) #34	NFE2L1 (ENSBBBG00000021740) #35	ENSBBBG00000021675 ##36	SNX11 (ENSBBBG00000021652) #37
Siberian musk deer	MODERN SPECIES	1210	ENSMMSG00000020300 #9	ENSMMSG00000020247 #10	PSMB3 (ENSMMSG00000020218) #11	PCGF2 (ENSMMSG00000020178)	CISD3 (ENSMMSG00000020156) #12	MLLT6 (ENSMMSG00000020128) #13	EPOP (ENSMMSG00000020116) #15	ENSMMSG00000020098	SRCIN1 (ENSMMSG00000019355) #16	ARHGAP23 (ENSMMSG00000019156) #17	SOCS7 (ENSMMSG00000019056) #18	GPR179 (ENSMMSG00000018906) #19	MRPL45 (ENSMMSG00000018849) #20	ENSMMSG00000018805	NPEPPS (ENSMMSG00000018632) #21	KPNB1 (ENSMMSG00000018546) #22	TBKBP1 (ENSMMSG00000018512) #23	TBX21 (ENSMMSG00000018475) #24	ENSMMSG00000018451	OSBPL7 (ENSMMSG00000018422) #25	MRPL10 (ENSMMSG00000018396) #26	LRRC46 (ENSMMSG00000018351) #27	SCRN2 (ENSMMSG00000018238) #28	SP6 (ENSMMSG00000018224) #29	SP2 (ENSMMSG00000024551) #30	PNPO (ENSMMSG00000024550) #31	PRR15L (ENSMMSG00000024549) #32	CDK5RAP3 (ENSMMSG00000024548) #33	COPZ2 (ENSMMSG00000024546) #34	NFE2L1 (ENSMMSG00000024541) #35	CBX1 (ENSMMSG00000024540) #36
Yarkand deer	MODERN SPECIES	28	PIP4K2B (ENSCHYG00000001264) #10	PSMB3 (ENSCHYG00000001228) #11	PCGF2 (ENSCHYG00000001164)	CISD3 (ENSCHYG00000001120) #12	MLLT6 (ENSCHYG00000001086) #13	EPOP (ENSCHYG00000001065) #15	ENSCHYG00000001051	SRCIN1 (ENSCHYG00000000846) #16	ENSCHYG00000000749	ARHGAP23 (ENSCHYG00000000727) #17	SOCS7 (ENSCHYG00000000633) #18	GPR179 (ENSCHYG00000000586) #19	MRPL45 (ENSCHYG00000000557) #20	NPEPPS (ENSCHYG00000000456) #21	ENSCHYG00000000411	KPNB1 (ENSCHYG00000000360) #22	TBKBP1 (ENSCHYG00000000333) #23	TBX21 (ENSCHYG00000000318) #24	OSBPL7 (ENSCHYG00000000286) #25	MRPL10 (ENSCHYG00000000265) #26	LRRC46 (ENSCHYG00000000251) #27	SCRN2 (ENSCHYG00000000227) #28	SP6 (ENSCHYG00000000221) #29	SP2 (ENSCHYG00000000198) #30	PNPO (ENSCHYG00000000157) #31	PRR15L (ENSCHYG00000000125) #32	CDK5RAP3 (ENSCHYG00000000101) #33	ENSCHYG00000004851	COPZ2 (ENSCHYG00000004829) #34	NFE2L1 (ENSCHYG00000004781) #35	CBX1 (ENSCHYG00000004750) #36
Cetacea	ANCESTRAL SPECIES	5	ENSGT00390000004450	ENSGT00440000039055 #9	ENSGT00940000159874 #10	ENSGT00550000074820.h #11	ENSGT00940000159730	ENSGT00390000004574 #12	ENSGT00940000158572 #13	ENSGT00940000153451.a.a.a #15	ENSGT00860000135964	ENSGT00940000157961.C #16	ENSGT00940000157982.b #17	ENSGT00940000156314 #18	ENSGT00940000160776 #19	ENSGT00390000012679 #20	ENSGT00940000155246 #21	ENSGT00550000074898 #22	ENSGT00940000153704.B #23	ENSGT00940000160397 #24	ENSGT00940000157439 #25	ENSGT00390000000603 #26	ENSGT00940000161315 #27	ENSGT00390000013474.b.a #28	ENSGT00940000161498 #29	ENSGT00940000159590 #30	ENSGT00390000011219 #31	ENSGT00940000154534.a #32	ENSGT00390000000713 #33	ENSGT00390000004405.b #34	ENSGT00950000182892.a.b.a.a #35	ENSGT00940000154152.d.b #36	ENSGT00940000160113 #37
Odontoceti	ANCESTRAL SPECIES	16	ENSGT00390000004450	ENSGT00440000039055 #9	ENSGT00940000159874 #10	ENSGT00550000074820.h #11	ENSGT00940000159730	ENSGT00390000004574 #12	ENSGT00940000158572 #13	ENSGT00940000153451.a.a.a #15	ENSGT00860000135964	ENSGT00940000157961.C #16	ENSGT00940000157982.b #17	ENSGT00940000156314 #18	ENSGT00940000160776 #19	ENSGT00390000012679 #20	ENSGT00940000155246 #21	ENSGT00550000074898 #22	ENSGT00940000153704.B #23	ENSGT00940000160397 #24	ENSGT00940000157439 #25	ENSGT00390000000603 #26	ENSGT00940000161315 #27	ENSGT00390000013474.b.a #28	ENSGT00940000161498 #29	ENSGT00940000159590 #30	ENSGT00390000011219 #31	ENSGT00940000154534.a #32	ENSGT00390000000713 #33	ENSGT00390000004405.b #34	ENSGT00950000182892.a.b.a.a #35	ENSGT00940000154152.d.b #36	ENSGT00940000160113 #37
Odontoceti_a	ANCESTRAL SPECIES	14	ENSGT00390000004450	ENSGT00440000039055 #9	ENSGT00940000159874 #10	ENSGT00550000074820.h #11	ENSGT00940000159730	ENSGT00390000004574 #12	ENSGT00940000158572 #13	ENSGT00940000153451.a.a.a #15	ENSGT00860000135964	ENSGT00940000157961.C #16	ENSGT00940000157982.b #17	ENSGT00940000156314 #18	ENSGT00940000160776 #19	ENSGT00390000012679 #20	ENSGT00940000155246 #21	ENSGT00550000074898 #22	ENSGT00940000153704.B #23	ENSGT00940000160397 #24	ENSGT00940000157439 #25	ENSGT00390000000603 #26	ENSGT00940000161315 #27	ENSGT00390000013474.b.a #28	ENSGT00940000161498 #29	ENSGT00940000159590 #30	ENSGT00390000011219 #31	ENSGT00940000154534.a #32	ENSGT00390000000713 #33	ENSGT00390000004405.b #34	ENSGT00950000182892.a.b.a.a #35	ENSGT00940000154152.d.b #36	ENSGT00940000160113 #37
Odontoceti_b	ANCESTRAL SPECIES	16	ENSGT00390000004450	ENSGT00440000039055 #9	ENSGT00940000159874 #10	ENSGT00550000074820.h #11	ENSGT00940000159730	ENSGT00390000004574 #12	ENSGT00940000158572 #13	ENSGT00940000153451.a.a.a #15	ENSGT00860000135964	ENSGT00940000157961.C #16	ENSGT00940000157982.b #17	ENSGT00940000156314 #18	ENSGT00940000160776 #19	ENSGT00390000012679 #20	ENSGT00940000155246 #21	ENSGT00550000074898 #22	ENSGT00940000153704.B #23	ENSGT00940000160397 #24	ENSGT00940000157439 #25	ENSGT00390000000603 #26	ENSGT00940000161315 #27	ENSGT00390000013474.b.a #28	ENSGT00940000161498 #29	ENSGT00940000159590 #30	ENSGT00390000011219 #31	ENSGT00940000154534.a #32	ENSGT00390000000713 #33	ENSGT00390000004405.b #34	ENSGT00950000182892.a.b.a.a #35	ENSGT00940000154152.d.b #36	ENSGT00940000160113 #37
Monodontidae	ANCESTRAL SPECIES	16	ENSGT00390000004450	ENSGT00440000039055 #9	ENSGT00940000159874 #10	ENSGT00550000074820.h #11	ENSGT00940000159730	ENSGT00390000004574 #12	ENSGT00940000158572 #13	ENSGT00940000153451.a.a.a #15	ENSGT00940000157961.C #16	ENSGT00860000135964	ENSGT00940000157982.b #17	ENSGT00940000156314 #18	ENSGT00940000160776 #19	ENSGT00390000012679 #20	ENSGT00940000155246 #21	ENSGT00550000074898 #22	ENSGT00940000153704.B #23	ENSGT00940000160397 #24	ENSGT00940000157439 #25	ENSGT00390000000603 #26	ENSGT00940000161315 #27	ENSGT00390000013474.b.a #28	ENSGT00940000161498 #29	ENSGT00940000159590 #30	ENSGT00390000011219 #31	ENSGT00940000154534.a #32	ENSGT00390000000713 #33	ENSGT00390000004405.b #34	ENSGT00950000182892.a.b.a.a #35	ENSGT00940000154152.d.b #36	ENSGT00940000160113 #37
Narwhal	MODERN SPECIES	316	C17orf98 (ENSMMNG00015018214)	CWC25 (ENSMMNG00015018190) #9	PIP4K2B (ENSMMNG00015018148) #10	PSMB3 (ENSMMNG00015018119) #11	PCGF2 (ENSMMNG00015018077)	CISD3 (ENSMMNG00015018042) #12	MLLT6 (ENSMMNG00015018011) #13	EPOP (ENSMMNG00015017989) #15	ENSMMNG00015017965	SRCIN1 (ENSMMNG00015017795) #16	ARHGAP23 (ENSMMNG00015017676) #17	SOCS7 (ENSMMNG00015017571) #18	GPR179 (ENSMMNG00015017480) #19	MRPL45 (ENSMMNG00015017435) #20	NPEPPS (ENSMMNG00015017277) #21	KPNB1 (ENSMMNG00015017215) #22	TBKBP1 (ENSMMNG00015017190) #23	TBX21 (ENSMMNG00015017166) #24	OSBPL7 (ENSMMNG00015017115) #25	MRPL10 (ENSMMNG00015017084) #26	LRRC46 (ENSMMNG00015017038) #27	SCRN2 (ENSMMNG00015016985) #28	SP6 (ENSMMNG00015016969) #29	SP2 (ENSMMNG00015016948) #30	PNPO (ENSMMNG00015016895) #31	PRR15L (ENSMMNG00015016868) #32	CDK5RAP3 (ENSMMNG00015016820) #33	COPZ2 (ENSMMNG00015016743) #34	NFE2L1 (ENSMMNG00015016634) #35	CBX1 (ENSMMNG00015016582) #36	SNX11 (ENSMMNG00015016452) #37
Beluga whale	MODERN SPECIES	26	CWC25 (ENSDLEG00000003841) #9	PIP4K2B (ENSDLEG00000003859) #10	PSMB3 (ENSDLEG00000003876) #11	PCGF2 (ENSDLEG00000003889)	CISD3 (ENSDLEG00000003901) #12	MLLT6 (ENSDLEG00000003908) #13	EPOP (ENSDLEG00000003928) #15	ENSDLEG00000003932	SRCIN1 (ENSDLEG00000003944) #16	ENSDLEG00000003976	ARHGAP23 (ENSDLEG00000003989) #17	SOCS7 (ENSDLEG00000004014) #18	GPR179 (ENSDLEG00000004032) #19	MRPL45 (ENSDLEG00000004037) #20	NPEPPS (ENSDLEG00000004076) #21	KPNB1 (ENSDLEG00000004223) #22	TBKBP1 (ENSDLEG00000004240) #23	TBX21 (ENSDLEG00000004247) #24	OSBPL7 (ENSDLEG00000004366) #25	MRPL10 (ENSDLEG00000004678) #26	ENSDLEG00000004684	SCRN2 (ENSDLEG00000004688) #28	SP6 (ENSDLEG00000004694) #29	SP2 (ENSDLEG00000004697) #30	PNPO (ENSDLEG00000004701) #31	PRR15L (ENSDLEG00000004704) #32	CDK5RAP3 (ENSDLEG00000004709) #33	COPZ2 (ENSDLEG00000004721) #34	ENSDLEG00000004734	NFE2L1 (ENSDLEG00000004744) #35	CBX1 (ENSDLEG00000004754) ##36
Vaquita	MODERN SPECIES	12	C17orf98 (ENSPSNG00000020408)	CWC25 (ENSPSNG00000020300) #9	PIP4K2B (ENSPSNG00000020267) #10	PSMB3 (ENSPSNG00000020246) #11	PCGF2 (ENSPSNG00000020192)	CISD3 (ENSPSNG00000020167) #12	MLLT6 (ENSPSNG00000020138) #13	EPOP (ENSPSNG00000020118) #15	ENSPSNG00000020092	SRCIN1 (ENSPSNG00000019720) #16	ARHGAP23 (ENSPSNG00000019589) #17	SOCS7 (ENSPSNG00000019467) #18	GPR179 (ENSPSNG00000019300) #19	MRPL45 (ENSPSNG00000019227) #20	NPEPPS (ENSPSNG00000019016) #21	KPNB1 (ENSPSNG00000018946) #22	TBKBP1 (ENSPSNG00000018911) #23	TBX21 (ENSPSNG00000018852) #24	OSBPL7 (ENSPSNG00000018799) #25	ENSPSNG00000018757	LRRC46 (ENSPSNG00000018676) #27	SCRN2 (ENSPSNG00000018588) #28	SP6 (ENSPSNG00000018568) #29	SP2 (ENSPSNG00000018528) #30	PNPO (ENSPSNG00000018423) #31	PRR15L (ENSPSNG00000018399) #32	CDK5RAP3 (ENSPSNG00000018321) #33	COPZ2 (ENSPSNG00000018262) #34	NFE2L1 (ENSPSNG00000018052) #35	ENSPSNG00000017984 #36	SNX11 (ENSPSNG00000017889) #37
Dolphin	MODERN SPECIES	703															NPEPPS (ENSTTRG00000004578) #21	KPNB1 (ENSTTRG00000004682) #22	TBKBP1 (ENSTTRG00000004712) #23	TBX21 (ENSTTRG00000004723) #24
Sperm whale	MODERN SPECIES	5	ENSPCTG00005006535	PLXDC1 (ENSPCTG00005006485)	ENSPCTG00005006459	FBXO47 (ENSPCTG00005006420)	LASP1 (ENSPCTG00005006383)	C14H17orf98 (ENSPCTG00005006357)	CWC25 (ENSPCTG00005006298) #9	PIP4K2B (ENSPCTG00005006258) #10	PSMB3 (ENSPCTG00005006224) #11	ENSPCTG00005006189	SRCIN1 (ENSPCTG00005005823) #16	ARHGAP23 (ENSPCTG00005005753) #17	SOCS7 (ENSPCTG00005005634) #18	GPR179 (ENSPCTG00005005545) #19	NPEPPS (ENSPCTG00005005245) #21	KPNB1 (ENSPCTG00005005195) #22	TBKBP1 (ENSPCTG00005005144) #23	TBX21 (ENSPCTG00005005105) #24	ENSPCTG00005005083 #30	CBX1 (ENSPCTG00005005034) #36	SKAP1 (ENSPCTG00005004985)	HOXB1 (ENSPCTG00005004966)	HOXB2 (ENSPCTG00005004951)	HOXB3 (ENSPCTG00005004930)	HOXB4 (ENSPCTG00005004920)	HOXB5 (ENSPCTG00005004905)	HOXB6 (ENSPCTG00005004887)	HOXB7 (ENSPCTG00005004882)	HOXB8 (ENSPCTG00005004864)	HOXB9 (ENSPCTG00005004847)	HOXB13 (ENSPCTG00005004788)
Blue whale	MODERN SPECIES	12	C17orf98 (ENSBMSG00010021796)	ENSBMSG00010021790 #9	ENSBMSG00010021787 #9	PIP4K2B (ENSBMSG00010021781) #10	PSMB3 (ENSBMSG00010021775) #11	PCGF2 (ENSBMSG00010021770)	CISD3 (ENSBMSG00010021765) #12	MLLT6 (ENSBMSG00010021759) #13	EPOP (ENSBMSG00010021755) #15	SRCIN1 (ENSBMSG00010021712) #16	ARHGAP23 (ENSBMSG00010021635) #17	SOCS7 (ENSBMSG00010021611) #18	GPR179 (ENSBMSG00010021578) #19	MRPL45 (ENSBMSG00010021543) #20	NPEPPS (ENSBMSG00010021506) #21	KPNB1 (ENSBMSG00010021489) #22	TBKBP1 (ENSBMSG00010021464) #23	TBX21 (ENSBMSG00010021443) #24	OSBPL7 (ENSBMSG00010021378) #25	LRRC46 (ENSBMSG00010021340) #27	SCRN2 (ENSBMSG00010021305) #28	ENSBMSG00010021289	ENSBMSG00010021276	ENSBMSG00010021253	LYZL6 (ENSBMSG00010021240)	ENSBMSG00010021232	RPRML (ENSBMSG00010021227)	GOSR2 (ENSBMSG00010021191)	WNT9B (ENSBMSG00010021124)	WNT3 (ENSBMSG00010021104)	NSF (ENSBMSG00010021007)
Camelidae	ANCESTRAL SPECIES	60	ENSGT00440000039055 #9	ENSGT00940000159874 #10	ENSGT00550000074820.h #11	ENSGT00940000159730	ENSGT00390000004574 #12	ENSGT00550000076427	ENSGT00940000158572 #13	ENSGT00940000153451.a.a.a #15	ENSGT00860000135964	ENSGT00940000157961.C #16	ENSGT00940000157982.b #17	ENSGT00940000156314 #18	ENSGT00940000160776 #19	ENSGT00390000012679 #20	ENSGT00940000155246 #21	ENSGT00550000074898 #22	ENSGT00940000153704.B #23	ENSGT00940000160397 #24	ENSGT00940000157439 #25	ENSGT00390000000603 #26	ENSGT00940000161315 #27	ENSGT00390000013474.b.a #28	ENSGT00940000161498 #29	ENSGT00940000159590 #30	ENSGT00940000154534.a #32	ENSGT00390000000713 #33	ENSGT00390000004405.b #34	ENSGT00950000185410	ENSGT00950000182892.a.b.a.a #35	ENSGT00940000154152.d.b #36	ENSGT00940000154152.d.a.a ##36
Arabian camel	MODERN SPECIES	7	PIP4K2B (ENSCDRG00005019827) #10	PSMB3 (ENSCDRG00005019812) #11	PCGF2 (ENSCDRG00005019798)	CISD3 (ENSCDRG00005019777) #12	ENSCDRG00005019767	MLLT6 (ENSCDRG00005019627) #13	EPOP (ENSCDRG00005019614) #15	ENSCDRG00005019601	ENSCDRG00005019591	SRCIN1 (ENSCDRG00005019469) #16	ENSCDRG00005019433 #17	SOCS7 (ENSCDRG00005019385) #18	GPR179 (ENSCDRG00005019342) #19	MRPL45 (ENSCDRG00005019287) #20	NPEPPS (ENSCDRG00005019119) #21	KPNB1 (ENSCDRG00005019017) #22	TBKBP1 (ENSCDRG00005018994) #23	TBX21 (ENSCDRG00005018980) #24	OSBPL7 (ENSCDRG00005018943) #25	MRPL10 (ENSCDRG00005018906) #26	LRRC46 (ENSCDRG00005018865) #27	SCRN2 (ENSCDRG00005018805) #28	SP6 (ENSCDRG00005018791) #29	SP2 (ENSCDRG00005018756) #30	PRR15L (ENSCDRG00005018636) #32	CDK5RAP3 (ENSCDRG00005018564) #33	COPZ2 (ENSCDRG00005018538) #34	ENSCDRG00005018515	NFE2L1 (ENSCDRG00005018357) #35	CBX1 (ENSCDRG00005018330) ##36	SNX11 (ENSCDRG00005018232) #37
Alpaca	MODERN SPECIES	798															NPEPPS (ENSVPAG00000003673) #21	KPNB1 (ENSVPAG00000003675) #22
Suina	ANCESTRAL SPECIES		ENSGT00440000039055 #9	ENSGT00940000159874 #10	ENSGT00550000074820.h #11	ENSGT00940000159730	ENSGT00390000004574 #12	ENSGT00940000158572 #13	ENSGT00940000153451.a.a.a #15	ENSGT00940000157961.C #16	ENSGT00860000135964	ENSGT00930000153020	ENSGT00940000157982.b #17	ENSGT00940000156314 #18	ENSGT00940000160776 #19	ENSGT00390000012679 #20	ENSGT00940000155246 #21	ENSGT00550000074898 #22	ENSGT00940000153704.B #23	ENSGT00940000160397 #24	ENSGT00940000157439 #25	ENSGT00390000000603 #26	ENSGT00940000161315 #27	ENSGT00390000013474.b.a #28	ENSGT00940000161498 #29	ENSGT00940000159590 #30	ENSGT00390000011219 #31	ENSGT00940000154534.a #32	ENSGT00390000000713 #33	ENSGT00390000004405.b #34	ENSGT00950000182892.a.b.a.a #35	ENSGT00940000154152.d.b #36	ENSGT00940000160113 #37
Chacoan peccary	MODERN SPECIES	145	RPL23 (ENSCWAG00000001426)	C17orf98 (ENSCWAG00000001413)	CWC25 (ENSCWAG00000001397) #9	PIP4K2B (ENSCWAG00000001369) #10	PSMB3 (ENSCWAG00000001345) #11	PCGF2 (ENSCWAG00000001317)	CISD3 (ENSCWAG00000001292) #12	MLLT6 (ENSCWAG00000001240) #13	EPOP (ENSCWAG00000001220) #15	SRCIN1 (ENSCWAG00000001149) #16	ARHGAP23 (ENSCWAG00000001049) #17	SOCS7 (ENSCWAG00000001002) #18	GPR179 (ENSCWAG00000000941) #19	MRPL45 (ENSCWAG00000000905) #20	NPEPPS (ENSCWAG00000000826) #21	KPNB1 (ENSCWAG00000000755) #22	TBKBP1 (ENSCWAG00000000726) #23	TBX21 (ENSCWAG00000000709) #24	OSBPL7 (ENSCWAG00000000623) #25	MRPL10 (ENSCWAG00000000589) #26	LRRC46 (ENSCWAG00000000570) #27	SCRN2 (ENSCWAG00000000520) #28	SP6 (ENSCWAG00000000502) #29	SP2 (ENSCWAG00000000474) #30	PNPO (ENSCWAG00000000427) #31	PRR15L (ENSCWAG00000000410) #32	CDK5RAP3 (ENSCWAG00000000377) #33	COPZ2 (ENSCWAG00000000341) #34	NFE2L1 (ENSCWAG00000000185) #35	CBX1 (ENSCWAG00000000121) #36	SNX11 (ENSCWAG00000000070) #37
Pig	MODERN SPECIES	3	CWC25 (ENSSSCG00000021478) #9	PIP4K2B (ENSSSCG00000033291) #10	PSMB3 (ENSSSCG00000037606) #11	PCGF2 (ENSSSCG00000039198)	CISD3 (ENSSSCG00000022187) #12	MLLT6 (ENSSSCG00000032478) #13	EPOP (ENSSSCG00000035677) #15	SRCIN1 (ENSSSCG00000018056) #16	ENSSSCG00000046446	ENSSSCG00000045701	ARHGAP23 (ENSSSCG00000018058) #17	SOCS7 (ENSSSCG00000018057) #18	GPR179 (ENSSSCG00000020884) #19	MRPL45 (ENSSSCG00000023263) #20	NPEPPS (ENSSSCG00000017513) #21	KPNB1 (ENSSSCG00000017514) #22	ENSSSCG00000057498 #23	TBX21 (ENSSSCG00000017517) #24	OSBPL7 (ENSSSCG00000017518) #25	MRPL10 (ENSSSCG00000017519) #26	LRRC46 (ENSSSCG00000017520) #27	SCRN2 (ENSSSCG00000017521) #28	SP6 (ENSSSCG00000017522) #29	SP2 (ENSSSCG00000017516) #30	PNPO (ENSSSCG00000032782) #31	PRR15L (ENSSSCG00000054179) #32	CDK5RAP3 (ENSSSCG00000017524) #33	COPZ2 (ENSSSCG00000017526) #34	NFE2L1 (ENSSSCG00000017525) #35	CBX1 (ENSSSCG00000017529) #36	SNX11 (ENSSSCG00000017528) #37