Vertebrata ANCESTRAL SPECIES ENSGT00940000155568 #22 Gnathostomata ANCESTRAL SPECIES ENSGT00940000155568 #22 Euteleostomi ANCESTRAL SPECIES 652 ENSGT00940000158446 #19 ENSGT00510000047881 #20 ENSGT00950000182973.b.a #21 ENSGT00940000155568 #22 ENSGT00940000165402 Sarcopterygii ANCESTRAL SPECIES 381 ENSGT00940000157349 #14 ENSGT00940000159754 #15 ENSGT00940000157698.b #16 ENSGT00940000156718 #17 ENSGT00940000159068 #18 ENSGT00940000158446 #19 ENSGT00510000047881 #20 ENSGT00950000182973.b.a #21 ENSGT00940000155568 #22 ENSGT00940000165402 Tetrapoda ANCESTRAL SPECIES 9 ENSGT00390000017480 #8 ENSGT00940000158775 #9 ENSGT00390000014065 #10 ENSGT00940000158970 #11 ENSGT00390000016785 #12 ENSGT00940000161022 ENSGT00940000160668 ENSGT00940000157349 #14 ENSGT00940000159754 #15 ENSGT00940000157698.b #16 ENSGT00940000156718 #17 ENSGT00940000159068 #18 ENSGT00940000158446 #19 ENSGT00510000047881 #20 ENSGT00950000182973.b.a #21 ENSGT00940000155568 #22 ENSGT00940000165402 ENSGT00390000012935 #23 ENSGT00940000158287 #24 ENSGT00390000014757 #25 ENSGT00940000164059 ENSGT00930000151062 #27 ENSGT00940000160630 #28 ENSGT01030000234629.E.b ENSGT00390000007055 #30 ENSGT00940000154348.c.b.a #31 ENSGT00390000016223 #32 ENSGT00940000160394.a #33 ENSGT00390000007640.b #34 ENSGT00940000156152 #36 ENSGT00940000159848 #37 Amniota ANCESTRAL SPECIES 20 ENSGT00390000017480 #8 ENSGT00940000158775 #9 ENSGT00390000014065 #10 ENSGT00940000158970 #11 ENSGT00390000016785 #12 ENSGT01020000230346.E #13 ENSGT00390000015299.a.b.a ENSGT00940000157349 #14 ENSGT00940000159754 #15 ENSGT00940000157698.b #16 ENSGT00940000156718 #17 ENSGT00940000159068 #18 ENSGT00940000158446 #19 ENSGT00510000047881 #20 ENSGT00950000182973.b.a #21 ENSGT00940000155568 #22 ENSGT00390000012935 #23 ENSGT00960000189374 ENSGT00940000158287 #24 ENSGT00390000014757 #25 ENSGT00940000164059 ENSGT00930000151062 #27 ENSGT00940000160630 #28 ENSGT00390000007055 #30 ENSGT00940000154348.c.b.a #31 ENSGT00390000016223 #32 ENSGT00940000160394.a #33 ENSGT00390000007640.b #34 ENSGT00940000156152 #36 ENSGT00940000159848 #37 ENSGT00940000156124 Mammalia ANCESTRAL SPECIES 9 ENSGT00940000154479.a ENSGT00390000017480 #8 ENSGT00940000158775 #9 ENSGT00390000014065 #10 ENSGT00940000158970 #11 ENSGT00390000016785 #12 ENSGT01020000230346.E #13 ENSGT00940000157349 #14 ENSGT00940000159754 #15 ENSGT00940000157698.b #16 ENSGT00940000156718 #17 ENSGT00940000159068 #18 ENSGT00940000158446 #19 ENSGT00510000047881 #20 ENSGT00950000182973.b.a #21 ENSGT00940000155568 #22 ENSGT00390000012935 #23 ENSGT00960000189374 ENSGT00940000158287 #24 ENSGT00390000014757 #25 ENSGT00940000164059 ENSGT00930000151062 #27 ENSGT00940000160630 #28 ENSGT00390000007055 #30 ENSGT00940000154348.c.b.a #31 ENSGT00390000016223 #32 ENSGT00940000160394.a #33 ENSGT00390000007640.b #34 ENSGT00940000156152 #36 ENSGT00940000159848 #37 ENSGT00940000156124 Theria ANCESTRAL SPECIES 8 ENSGT00940000154479.a ENSGT00390000017480 #8 ENSGT00940000158775 #9 ENSGT00390000014065 #10 ENSGT00940000158970 #11 ENSGT00390000016785 #12 ENSGT01020000230346.E #13 ENSGT00940000157349 #14 ENSGT00940000159754 #15 ENSGT00940000157698.b #16 ENSGT00940000156718 #17 ENSGT00940000159068 #18 ENSGT00940000158446 #19 ENSGT00510000047881 #20 ENSGT00950000182973.b.a #21 ENSGT00940000155568 #22 ENSGT00390000012935 #23 ENSGT00960000189374 ENSGT00940000158287 #24 ENSGT00390000014757 #25 ENSGT00940000164059 ENSGT00930000151062 #27 ENSGT00940000160630 #28 ENSGT00390000007055 #30 ENSGT00940000154348.c.b.a #31 ENSGT00390000016223 #32 ENSGT00940000160394.a #33 ENSGT00390000007640.b #34 ENSGT00940000156152 #36 ENSGT00940000159848 #37 ENSGT00940000156124 Eutheria ANCESTRAL SPECIES 3 ENSGT00940000154479.a ENSGT00390000017480 #8 ENSGT00940000158775 #9 ENSGT00390000014065 #10 ENSGT00940000158970 #11 ENSGT00390000016785 #12 ENSGT01020000230346.E #13 ENSGT00940000157349 #14 ENSGT00940000159754 #15 ENSGT00940000157698.b #16 ENSGT00940000156718 #17 ENSGT00940000159068 #18 ENSGT00940000158446 #19 ENSGT00510000047881 #20 ENSGT00950000182973.b.a #21 ENSGT00940000155568 #22 ENSGT00390000012935 #23 ENSGT00960000189374 ENSGT00940000158287 #24 ENSGT00390000014757 #25 ENSGT00940000154234.b #26 ENSGT00930000151062 #27 ENSGT00940000160630 #28 ENSGT00390000007055 #30 ENSGT00940000154348.c.b.a #31 ENSGT00390000016223 #32 ENSGT00940000160394.a #33 ENSGT00390000007640.b #34 ENSGT00940000156152 #36 ENSGT00940000159848 #37 ENSGT00940000156124 Boreoeutheria ANCESTRAL SPECIES 1 ENSGT00940000154479.a ENSGT00390000017480 #8 ENSGT00940000158775 #9 ENSGT00390000014065 #10 ENSGT00940000158970 #11 ENSGT00390000016785 #12 ENSGT01020000230346.E #13 ENSGT00940000157349 #14 ENSGT00940000159754 #15 ENSGT00940000157698.b #16 ENSGT00940000156718 #17 ENSGT00940000159068 #18 ENSGT00940000158446 #19 ENSGT00510000047881 #20 ENSGT00950000182973.b.a #21 ENSGT00940000155568 #22 ENSGT00390000012935 #23 ENSGT00960000189374 ENSGT00940000158287 #24 ENSGT00390000014757 #25 ENSGT00940000154234.b #26 ENSGT00930000151062 #27 ENSGT00940000160630 #28 ENSGT00390000007055 #30 ENSGT00940000154348.c.b.a #31 ENSGT00910000148141 ENSGT00390000016223 #32 ENSGT00940000160394.a #33 ENSGT00390000007640.b #34 ENSGT00940000156152 #36 ENSGT00940000159848 #37 Euarchontoglires ANCESTRAL SPECIES 1 ENSGT00940000154479.a ENSGT00390000017480 #8 ENSGT00940000158775 #9 ENSGT00390000014065 #10 ENSGT00940000158970 #11 ENSGT00390000016785 #12 ENSGT01020000230346.E #13 ENSGT00940000157349 #14 ENSGT00940000159754 #15 ENSGT00940000157698.b #16 ENSGT00940000156718 #17 ENSGT00940000159068 #18 ENSGT00940000158446 #19 ENSGT00510000047881 #20 ENSGT00950000182973.b.a #21 ENSGT00940000155568 #22 ENSGT00390000012935 #23 ENSGT00960000189374 ENSGT00940000158287 #24 ENSGT00390000014757 #25 ENSGT00940000154234.b #26 ENSGT00930000151062 #27 ENSGT00940000160630 #28 ENSGT00390000007055 #30 ENSGT00940000154348.c.b.a #31 ENSGT00910000148141 ENSGT00390000016223 #32 ENSGT00940000160394.a #33 ENSGT00390000007640.b #34 ENSGT00940000156152 #36 ENSGT00940000159848 #37 Euarchontoglires_A ANCESTRAL SPECIES 1 ENSGT00940000154479.a ENSGT00390000017480 #8 ENSGT00940000158775 #9 ENSGT00390000014065 #10 ENSGT00940000158970 #11 ENSGT00390000016785 #12 ENSGT01020000230346.E #13 ENSGT00940000157349 #14 ENSGT00940000159754 #15 ENSGT00940000157698.b #16 ENSGT00940000156718 #17 ENSGT00940000159068 #18 ENSGT00940000158446 #19 ENSGT00510000047881 #20 ENSGT00950000182973.b.a #21 ENSGT00940000155568 #22 ENSGT00390000012935 #23 ENSGT00960000189374 ENSGT00940000158287 #24 ENSGT00390000014757 #25 ENSGT00940000154234.b #26 ENSGT00930000151062 #27 ENSGT00940000160630 #28 ENSGT00390000007055 #30 ENSGT00940000154348.c.b.a #31 ENSGT00390000016223 #32 ENSGT00940000160394.a #33 ENSGT00390000007640.b #34 ENSGT00940000156152 #36 ENSGT00940000159848 #37 ENSGT00940000156124 Glires ANCESTRAL SPECIES 1 ENSGT00940000154479.a ENSGT00390000017480 #8 ENSGT00940000158775 #9 ENSGT00390000014065 #10 ENSGT00940000158970 #11 ENSGT00390000016785 #12 ENSGT01020000230346.E #13 ENSGT00940000157349 #14 ENSGT00940000159754 #15 ENSGT00940000157698.b #16 ENSGT00940000156718 #17 ENSGT00940000159068 #18 ENSGT00940000158446 #19 ENSGT00510000047881 #20 ENSGT00950000182973.b.a #21 ENSGT00940000155568 #22 ENSGT00390000012935 #23 ENSGT00960000189374 ENSGT00940000158287 #24 ENSGT00390000014757 #25 ENSGT00940000154234.b #26 ENSGT00930000151062 #27 ENSGT00940000160630 #28 ENSGT00390000007055 #30 ENSGT00940000154348.c.b.a #31 ENSGT00390000016223 #32 ENSGT00940000160394.a #33 ENSGT00390000007640.b #34 ENSGT00940000156152 #36 ENSGT00940000159848 #37 ENSGT00940000156124 Rodentia ANCESTRAL SPECIES 1 ENSGT00940000154479.a ENSGT00390000017480 #8 ENSGT00940000158775 #9 ENSGT00390000014065 #10 ENSGT00940000158970 #11 ENSGT00390000016785 #12 ENSGT01020000230346.E #13 ENSGT00940000157349 #14 ENSGT00940000159754 #15 ENSGT00940000157698.b #16 ENSGT00940000156718 #17 ENSGT00940000159068 #18 ENSGT00940000158446 #19 ENSGT00510000047881 #20 ENSGT00950000182973.b.a #21 ENSGT00940000155568 #22 ENSGT00390000012935 #23 ENSGT00960000189374 ENSGT00940000158287 #24 ENSGT00390000014757 #25 ENSGT00940000154234.b #26 ENSGT00930000151062 #27 ENSGT00940000160630 #28 ENSGT00390000007055 #30 ENSGT00940000154348.c.b.a #31 ENSGT00390000016223 #32 ENSGT00940000160394.a #33 ENSGT00390000007640.b #34 ENSGT00940000156152 #36 ENSGT00860000136066 #35 ENSGT00940000159848 #37 Rodentia_B ANCESTRAL SPECIES 5 ENSGT00940000161832.a #7 ENSGT00390000017480 #8 ENSGT00940000158775 #9 ENSGT00390000014065 #10 ENSGT00940000158970 #11 ENSGT00390000016785 #12 ENSGT01020000230346.E #13 ENSGT00940000157349 #14 ENSGT00940000159754 #15 ENSGT00940000157698.b #16 ENSGT00940000156718 #17 ENSGT00940000159068 #18 ENSGT00940000158446 #19 ENSGT00510000047881 #20 ENSGT00950000182973.b.a #21 ENSGT00940000155568 #22 ENSGT00390000012935 #23 ENSGT00960000189374 ENSGT00940000158287 #24 ENSGT00390000014757 #25 ENSGT00940000154234.b #26 ENSGT00930000151062 #27 ENSGT00940000160630 #28 ENSGT00390000007055 #30 ENSGT00940000154348.c.b.a #31 ENSGT00390000016223 #32 ENSGT00940000160394.a #33 ENSGT00390000007640.b #34 ENSGT00940000156152 #36 ENSGT00860000136066 #35 ENSGT00940000159848 #37 Myomorpha ANCESTRAL SPECIES 4 ENSGT00940000161832.a #7 ENSGT00390000017480 #8 ENSGT00940000158775 #9 ENSGT00390000014065 #10 ENSGT00940000158970 #11 ENSGT00390000016785 #12 ENSGT01020000230346.E #13 ENSGT00940000157349 #14 ENSGT00940000159754 #15 ENSGT00940000157698.b #16 ENSGT00940000156718 #17 ENSGT00940000159068 #18 ENSGT00940000158446 #19 ENSGT00510000047881 #20 ENSGT00950000182973.b.a #21 ENSGT00940000155568 #22 ENSGT00390000012935 #23 ENSGT00960000189374 ENSGT00940000158287 #24 ENSGT00390000014757 #25 ENSGT00940000154234.b #26 ENSGT00930000151062 #27 ENSGT00940000160630 #28 ENSGT00390000007055 #30 ENSGT00940000154348.c.b.a #31 ENSGT00390000016223 #32 ENSGT00940000160394.a #33 ENSGT00390000007640.b #34 ENSGT00940000156152 #36 ENSGT00860000136066 #35 ENSGT00940000159848 #37 Muroidea ANCESTRAL SPECIES 2 ENSGT00940000161832.a #7 ENSGT00390000017480 #8 ENSGT00940000158775 #9 ENSGT00390000014065 #10 ENSGT00940000158970 #11 ENSGT00390000016785 #12 ENSGT01020000230346.E #13 ENSGT00940000157349 #14 ENSGT00940000159754 #15 ENSGT00940000157698.b #16 ENSGT00940000156718 #17 ENSGT00940000159068 #18 ENSGT00940000158446 #19 ENSGT00510000047881 #20 ENSGT00950000182973.b.a #21 ENSGT00940000155568 #22 ENSGT00390000012935 #23 ENSGT00960000189374 ENSGT00940000158287 #24 ENSGT00390000014757 #25 ENSGT00940000154234.b #26 ENSGT00930000151062 #27 ENSGT00940000160630 #28 ENSGT00390000007055 #30 ENSGT00940000154348.c.b.a #31 ENSGT00390000016223 #32 ENSGT00940000160394.a #33 ENSGT00390000007640.b #34 ENSGT00940000156152 #36 ENSGT00860000136066 #35 ENSGT00940000159848 #37 Muroidea_A ANCESTRAL SPECIES 2 ENSGT00940000161832.a #7 ENSGT00390000017480 #8 ENSGT00940000158775 #9 ENSGT00390000014065 #10 ENSGT00940000158970 #11 ENSGT00390000016785 #12 ENSGT01020000230346.E #13 ENSGT00940000157349 #14 ENSGT00940000159754 #15 ENSGT00940000157698.b #16 ENSGT00940000156718 #17 ENSGT00940000159068 #18 ENSGT00940000158446 #19 ENSGT00510000047881 #20 ENSGT00950000182973.b.a #21 ENSGT00940000155568 #22 ENSGT00390000012935 #23 ENSGT00960000189374 ENSGT00940000158287 #24 ENSGT00390000014757 #25 ENSGT00940000154234.b #26 ENSGT00930000151062 #27 ENSGT00940000160630 #28 ENSGT00390000007055 #30 ENSGT00940000154348.c.b.a #31 ENSGT00390000016223 #32 ENSGT00940000160394.a #33 ENSGT00390000007640.b #34 ENSGT00940000156152 #36 ENSGT00860000136066 #35 ENSGT00940000159848 #37 Cricetidae ANCESTRAL SPECIES 5 ENSGT00940000161832.a #7 ENSGT00390000017480 #8 ENSGT00940000158775 #9 ENSGT00390000014065 #10 ENSGT00940000158970 #11 ENSGT00390000016785 #12 ENSGT01020000230346.E #13 ENSGT00940000157349 #14 ENSGT00940000159754 #15 ENSGT00940000157698.b #16 ENSGT00940000156718 #17 ENSGT00940000159068 #18 ENSGT00940000158446 #19 ENSGT00510000047881 #20 ENSGT00950000182973.b.a #21 ENSGT00940000155568 #22 ENSGT00390000012935 #23 ENSGT00940000158287 #24 ENSGT00390000014757 #25 ENSGT00940000154234.b #26 ENSGT00930000151062 #27 ENSGT00940000160630 #28 ENSGT00390000007055 #30 ENSGT00940000154348.c.b.a #31 ENSGT00390000016223 #32 ENSGT00940000160394.a #33 ENSGT00390000007640.b #34 ENSGT00940000156152 #36 ENSGT00860000136066 #35 ENSGT00940000159848 #37 ENSGT00940000156124 Cricetinae ANCESTRAL SPECIES 1 ENSGT00940000161832.a #7 ENSGT00390000017480 #8 ENSGT00940000158775 #9 ENSGT00390000014065 #10 ENSGT00940000158970 #11 ENSGT00390000016785 #12 ENSGT01020000230346.E #13 ENSGT00940000157349 #14 ENSGT00940000159754 #15 ENSGT00940000157698.b #16 ENSGT00940000156718 #17 ENSGT00940000159068 #18 ENSGT00940000158446 #19 ENSGT00510000047881 #20 ENSGT00950000182973.b.a #21 ENSGT00940000155568 #22 ENSGT00390000012935 #23 ENSGT00940000158287 #24 ENSGT00390000014757 #25 ENSGT00940000154234.b #26 ENSGT00930000151062 #27 ENSGT00940000160630 #28 ENSGT00390000007055 #30 ENSGT00940000154348.c.b.a #31 ENSGT00390000016223 #32 ENSGT00940000160394.a #33 ENSGT00390000007640.b #34 ENSGT00940000156152 #36 ENSGT00860000136066 #35 ENSGT00940000159848 #37 ENSGT00940000156124 Chinese hamster chok1gshd MODERN SPECIES 188 C1qtnf4 (ENSCGRG00001007540) #7 Ndufs3 (ENSCGRG00001024136) #8 Kbtbd4 (ENSCGRG00001023919) #9 Ptpmt1 (ENSCGRG00001012152) #10 Celf1 (ENSCGRG00001011274) #11 Rapsn (ENSCGRG00001009650) #12 Psmc3 (ENSCGRG00001005657) #13 Slc39a13 (ENSCGRG00001003447) #14 Spi1 (ENSCGRG00001009684) #15 Mybpc3 (ENSCGRG00001006702) #16 Madd (ENSCGRG00001024681) #17 Nr1h3 (ENSCGRG00001022656) #18 Acp2 (ENSCGRG00001022138) #19 Ddb2 (ENSCGRG00001012939) #20 Pacsin3 (ENSCGRG00001011840) #21 Arfgap2 (ENSCGRG00001010700) #22 Cstpp1 (ENSCGRG00001020042) #23 Lrp4 (ENSCGRG00001018783) #24 Ckap5 (ENSCGRG00001013368) #25 F2 (ENSCGRG00001023426) #26 Zfp408 (ENSCGRG00001023588) #27 Arhgap1 (ENSCGRG00001023260) #28 ENSCGRG00001022859 #29 Atg13 (ENSCGRG00001022112) #30 Harbi1 (ENSCGRG00001021313) #31 Ambra1 (ENSCGRG00001020313) #32 Chrm4 (ENSCGRG00001012019) #33 Mdk (ENSCGRG00001022566) #34 ENSCGRG00001011874 #35 Dgkz (ENSCGRG00001021082) #36 Creb3l1 (ENSCGRG00001011598) #37 Golden Hamster MODERN SPECIES 618 C1qtnf4 (ENSMAUG00000009128) #7 Ndufs3 (ENSMAUG00000010036) #8 Kbtbd4 (ENSMAUG00000009694) #9 Ptpmt1 (ENSMAUG00000010436) #10 Celf1 (ENSMAUG00000009468) #11 Rapsn (ENSMAUG00000008690) #12 Psmc3 (ENSMAUG00000007346) #13 ENSMAUG00000009110 #14 Spi1 (ENSMAUG00000008854) #15 Mybpc3 (ENSMAUG00000008229) #16 Madd (ENSMAUG00000009156) #17 Nr1h3 (ENSMAUG00000008657) #18 Acp2 (ENSMAUG00000007767) #19 Ddb2 (ENSMAUG00000010179) #20 Pacsin3 (ENSMAUG00000009572) #21 Arfgap2 (ENSMAUG00000009218) #22 ENSMAUG00000008870 ENSMAUG00000008742 Cstpp1 (ENSMAUG00000008635) #23 Lrp4 (ENSMAUG00000016435) #24 Ckap5 (ENSMAUG00000012944) #25 F2 (ENSMAUG00000009414) #26 Arhgap1 (ENSMAUG00000012048) #28 Atg13 (ENSMAUG00000011052) #30 Harbi1 (ENSMAUG00000012193) #31 Ambra1 (ENSMAUG00000008821) #32 Chrm4 (ENSMAUG00000007510) #33 Mdk (ENSMAUG00000006759) #34 Dgkz (ENSMAUG00000008433) #36 Creb3l1 (ENSMAUG00000003224) #37 Phf21a (ENSMAUG00000011351) Cricetidae_B ANCESTRAL SPECIES 34 ENSGT00940000161832.a #7 ENSGT00390000017480 #8 ENSGT00940000158775 #9 ENSGT00390000014065 #10 ENSGT00940000158970 #11 ENSGT00390000016785 #12 ENSGT01020000230346.E #13 ENSGT00940000157349 #14 ENSGT00940000159754 #15 ENSGT00940000157698.b #16 ENSGT00940000156718 #17 ENSGT00940000159068 #18 ENSGT00940000158446 #19 ENSGT00510000047881 #20 ENSGT00950000182973.b.a #21 ENSGT00940000155568 #22 ENSGT00390000012935 #23 ENSGT00940000158287 #24 ENSGT00390000014757 #25 ENSGT00940000154234.b #26 ENSGT00930000151062 #27 ENSGT00940000160630 #28 ENSGT00390000007055 #30 ENSGT00940000154348.c.b.a #31 ENSGT00390000016223 #32 ENSGT00940000160394.a #33 ENSGT00390000007640.b #34 ENSGT00940000156152 #36 ENSGT00940000159848 #37 ENSGT00940000156124 ENSGT00940000158758 Prairie vole MODERN SPECIES 81 Ndufs3 (ENSMOCG00000009375) #8 Kbtbd4 (ENSMOCG00000021780) #9 Ptpmt1 (ENSMOCG00000018913) #10 Celf1 (ENSMOCG00000012633) #11 Rapsn (ENSMOCG00000012267) #12 Psmc3 (ENSMOCG00000001464) #13 ENSMOCG00000006097 #14 ENSMOCG00000008195 #14 Spi1 (ENSMOCG00000006114) #15 Mybpc3 (ENSMOCG00000008344) #16 Madd (ENSMOCG00000003278) #17 Nr1h3 (ENSMOCG00000010671) #18 Acp2 (ENSMOCG00000002882) #19 Ddb2 (ENSMOCG00000021291) #20 Pacsin3 (ENSMOCG00000022577) #21 Arfgap2 (ENSMOCG00000016700) #22 Cstpp1 (ENSMOCG00000006672) #23 Lrp4 (ENSMOCG00000005823) #24 Ckap5 (ENSMOCG00000022214) #25 F2 (ENSMOCG00000019585) #26 Arhgap1 (ENSMOCG00000008533) #28 Atg13 (ENSMOCG00000018209) #30 ENSMOCG00000007253 Ambra1 (ENSMOCG00000018792) #32 Chrm4 (ENSMOCG00000016103) #33 Mdk (ENSMOCG00000014474) #34 Dgkz (ENSMOCG00000000694) #36 Creb3l1 (ENSMOCG00000012802) #37 Phf21a (ENSMOCG00000018126) Large2 (ENSMOCG00000004366) Pex16 (ENSMOCG00000015385) Northern American deer mouse MODERN SPECIES 17 Mtch2 (ENSPEMG00000010063) C1qtnf4 (ENSPEMG00000024602) #7 Ndufs3 (ENSPEMG00000007248) #8 Kbtbd4 (ENSPEMG00000001992) #9 Ptpmt1 (ENSPEMG00000030250) #10 Celf1 (ENSPEMG00000015644) #11 Rapsn (ENSPEMG00000016952) #12 Slc39a13 (ENSPEMG00000016290) #14 Spi1 (ENSPEMG00000009647) #15 Mybpc3 (ENSPEMG00000009479) #16 Madd (ENSPEMG00000001264) #17 Nr1h3 (ENSPEMG00000018824) #18 Acp2 (ENSPEMG00000011860) #19 Ddb2 (ENSPEMG00000012899) #20 Pacsin3 (ENSPEMG00000018424) #21 Arfgap2 (ENSPEMG00000009220) #22 Cstpp1 (ENSPEMG00000018931) #23 Lrp4 (ENSPEMG00000015598) #24 Ckap5 (ENSPEMG00000007231) #25 F2 (ENSPEMG00000018118) #26 Zfp408 (ENSPEMG00000016757) #27 Arhgap1 (ENSPEMG00000011370) #28 Atg13 (ENSPEMG00000017021) #30 Harbi1 (ENSPEMG00000013606) #31 ENSPEMG00000025318 Ambra1 (ENSPEMG00000005111) #32 Chrm4 (ENSPEMG00000028345) #33 Mdk (ENSPEMG00000014123) #34 Dgkz (ENSPEMG00000009628) #36 Creb3l1 (ENSPEMG00000019031) #37 Phf21a (ENSPEMG00000004446) Murinae ANCESTRAL SPECIES 1 ENSGT00940000161832.a #7 ENSGT00390000017480 #8 ENSGT00940000158775 #9 ENSGT00390000014065 #10 ENSGT00940000158970 #11 ENSGT00390000016785 #12 ENSGT01020000230346.E #13 ENSGT00940000157349 #14 ENSGT00940000159754 #15 ENSGT00940000157698.b #16 ENSGT00940000156718 #17 ENSGT00940000159068 #18 ENSGT00940000158446 #19 ENSGT00510000047881 #20 ENSGT00950000182973.b.a #21 ENSGT00940000155568 #22 ENSGT00390000012935 #23 ENSGT00960000189374 ENSGT00940000158287 #24 ENSGT00390000014757 #25 ENSGT00940000154234.b #26 ENSGT00930000151062 #27 ENSGT00940000160630 #28 ENSGT00390000007055 #30 ENSGT00940000154348.c.b.a #31 ENSGT00390000016223 #32 ENSGT00940000160394.a #33 ENSGT00390000007640.b #34 ENSGT00940000156152 #36 ENSGT00860000136066 #35 ENSGT00940000159848 #37 Mus ANCESTRAL SPECIES 1 ENSGT00940000161832.a #7 ENSGT00390000017480 #8 ENSGT00940000158775 #9 ENSGT00390000014065 #10 ENSGT00940000158970 #11 ENSGT00390000016785 #12 ENSGT01020000230346.E #13 ENSGT00940000157349 #14 ENSGT00940000159754 #15 ENSGT00940000157698.b #16 ENSGT00940000156718 #17 ENSGT00940000159068 #18 ENSGT00940000158446 #19 ENSGT00510000047881 #20 ENSGT00950000182973.b.a #21 ENSGT00940000155568 #22 ENSGT00390000012935 #23 ENSGT00960000189374 ENSGT00940000158287 #24 ENSGT00390000014757 #25 ENSGT00940000154234.b #26 ENSGT00930000151062 #27 ENSGT00940000160630 #28 ENSGT00390000007055 #30 ENSGT00940000154348.c.b.a #31 ENSGT00390000016223 #32 ENSGT00940000160394.a #33 ENSGT00390000007640.b #34 ENSGT00940000156152 #36 ENSGT00860000136066 #35 ENSGT00940000159848 #37 Mus_A ANCESTRAL SPECIES ENSGT00940000161832.a #7 ENSGT00390000017480 #8 ENSGT00940000158775 #9 ENSGT00390000014065 #10 ENSGT00940000158970 #11 ENSGT00390000016785 #12 ENSGT01020000230346.E #13 ENSGT00940000157349 #14 ENSGT00940000159754 #15 ENSGT00940000157698.b #16 ENSGT00940000156718 #17 ENSGT00940000159068 #18 ENSGT00940000158446 #19 ENSGT00510000047881 #20 ENSGT00950000182973.b.a #21 ENSGT00940000155568 #22 ENSGT00390000012935 #23 ENSGT00960000189374 ENSGT00940000158287 #24 ENSGT00390000014757 #25 ENSGT00940000154234.b #26 ENSGT00930000151062 #27 ENSGT00940000160630 #28 ENSGT00390000007055 #30 ENSGT00940000154348.c.b.a #31 ENSGT00390000016223 #32 ENSGT00940000160394.a #33 ENSGT00390000007640.b.g #34 ENSGT00940000156152 #36 ENSGT00860000136066 #35 ENSGT00940000159848 #37 Mus_B ANCESTRAL SPECIES 1 ENSGT00940000161832.a #7 ENSGT00390000017480 #8 ENSGT00940000158775 #9 ENSGT00390000014065 #10 ENSGT00940000158970 #11 ENSGT00390000016785 #12 ENSGT01020000230346.E #13 ENSGT00940000157349 #14 ENSGT00940000159754 #15 ENSGT00940000157698.b #16 ENSGT00940000156718 #17 ENSGT00940000159068 #18 ENSGT00940000158446 #19 ENSGT00510000047881 #20 ENSGT00950000182973.b.a #21 ENSGT00940000155568 #22 ENSGT00390000012935 #23 ENSGT00960000189374 ENSGT00940000158287 #24 ENSGT00390000014757 #25 ENSGT00940000154234.b #26 ENSGT00930000151062 #27 ENSGT00940000160630 #28 ENSGT00390000007055 #30 ENSGT00940000154348.c.b.a #31 ENSGT00390000016223 #32 ENSGT00940000160394.a #33 ENSGT00390000007640.b.g #34 ENSGT00940000156152 #36 ENSGT00860000136066 #35 ENSGT00940000159848 #37 Mouse MODERN SPECIES 11 C1qtnf4 (ENSMUSG00000040794) #7 Ndufs3 (ENSMUSG00000005510) #8 Kbtbd4 (ENSMUSG00000005505) #9 Ptpmt1 (ENSMUSG00000063235) #10 Celf1 (ENSMUSG00000005506) #11 Rapsn (ENSMUSG00000002104) #12 Psmc3 (ENSMUSG00000002102) #13 Slc39a13 (ENSMUSG00000002105) #14 Spi1 (ENSMUSG00000002111) #15 Mybpc3 (ENSMUSG00000002100) #16 Madd (ENSMUSG00000040687) #17 Nr1h3 (ENSMUSG00000002108) #18 Acp2 (ENSMUSG00000002103) #19 Ddb2 (ENSMUSG00000002109) #20 Pacsin3 (ENSMUSG00000027257) #21 Arfgap2 (ENSMUSG00000027255) #22 Cstpp1 (ENSMUSG00000040591) #23 Lrp4 (ENSMUSG00000027253) #24 Ckap5 (ENSMUSG00000040549) #25 F2 (ENSMUSG00000027249) #26 Zfp408 (ENSMUSG00000075040) #27 Arhgap1 (ENSMUSG00000027247) #28 Atg13 (ENSMUSG00000027244) #30 Harbi1 (ENSMUSG00000027243) #31 Ambra1 (ENSMUSG00000040506) #32 Chrm4 (ENSMUSG00000040495) #33 Mdk (ENSMUSG00000027239) #34 Dgkz (ENSMUSG00000040479) #36 Creb3l1 (ENSMUSG00000027230) #37 Phf21a (ENSMUSG00000058318) Large2 (ENSMUSG00000040434) Mus_C ANCESTRAL SPECIES ENSGT00940000161832.a #7 ENSGT00390000017480 #8 ENSGT00940000158775 #9 ENSGT00390000014065 #10 ENSGT00940000158970 #11 ENSGT00390000016785 #12 ENSGT01020000230346.E #13 ENSGT00940000157349 #14 ENSGT00940000159754 #15 ENSGT00940000157698.b #16 ENSGT00940000156718 #17 ENSGT00940000159068 #18 ENSGT00940000158446 #19 ENSGT00510000047881 #20 ENSGT00950000182973.b.a #21 ENSGT00940000155568 #22 ENSGT00390000012935 #23 ENSGT00960000189374 ENSGT00940000158287 #24 ENSGT00390000014757 #25 ENSGT00940000154234.b #26 ENSGT00930000151062 #27 ENSGT00940000160630 #28 ENSGT00390000007055 #30 ENSGT00940000154348.c.b.a #31 ENSGT00390000016223 #32 ENSGT00940000160394.a #33 ENSGT00390000007640.b.g #34 ENSGT00940000156152 #36 ENSGT00860000136066 #35 ENSGT00940000159848 #37 spretus MODERN SPECIES 11 Mtch2 (MGP_SPRETEiJ_G0024855) C1qtnf4 (MGP_SPRETEiJ_G0024856) #7 Ndufs3 (MGP_SPRETEiJ_G0024857) #8 Kbtbd4 (MGP_SPRETEiJ_G0024858) #9 Celf1 (MGP_SPRETEiJ_G0024859) #11 Rapsn (MGP_SPRETEiJ_G0024860) #12 Psmc3 (MGP_SPRETEiJ_G0024861) #13 Slc39a13 (MGP_SPRETEiJ_G0024862) #14 Spi1 (MGP_SPRETEiJ_G0024863) #15 Mybpc3 (MGP_SPRETEiJ_G0024864) #16 Madd (MGP_SPRETEiJ_G0024865) #17 Nr1h3 (MGP_SPRETEiJ_G0024866) #18 Acp2 (MGP_SPRETEiJ_G0024867) #19 Ddb2 (MGP_SPRETEiJ_G0024868) #20 Pacsin3 (MGP_SPRETEiJ_G0024869) #21 Arfgap2 (MGP_SPRETEiJ_G0024870) #22 Cstpp1 (MGP_SPRETEiJ_G0024871) #23 Lrp4 (MGP_SPRETEiJ_G0024872) #24 Ckap5 (MGP_SPRETEiJ_G0024873) #25 F2 (MGP_SPRETEiJ_G0024874) #26 Zfp408 (MGP_SPRETEiJ_G0024875) #27 Arhgap1 (MGP_SPRETEiJ_G0024876) #28 Atg13 (MGP_SPRETEiJ_G0024877) #30 Harbi1 (MGP_SPRETEiJ_G0024878) #31 Ambra1 (MGP_SPRETEiJ_G0024879) #32 Chrm4 (MGP_SPRETEiJ_G0024880) #33 Mdk (MGP_SPRETEiJ_G0024881) #34 Dgkz (MGP_SPRETEiJ_G0024882) #36 MGP_SPRETEiJ_G0024883 #35 Creb3l1 (MGP_SPRETEiJ_G0024884) #37 Phf21a (MGP_SPRETEiJ_G0024885) Steppe mouse MODERN SPECIES 36 Ndufs3 (ENSMSIG00000027630) #8 Kbtbd4 (ENSMSIG00000027623) #9 ENSMSIG00000027615 #10 Celf1 (ENSMSIG00000027572) #11 ENSMSIG00000027554 Rapsn (ENSMSIG00000027530) #12 Psmc3 (ENSMSIG00000027459) #13 Slc39a13 (ENSMSIG00000027429) #14 Spi1 (ENSMSIG00000027421) #15 Mybpc3 (ENSMSIG00000027308) #16 Madd (ENSMSIG00000021063) #17 Nr1h3 (ENSMSIG00000020950) #18 Acp2 (ENSMSIG00000020936) #19 Ddb2 (ENSMSIG00000020921) #20 Pacsin3 (ENSMSIG00000020892) #21 Arfgap2 (ENSMSIG00000020760) #22 ENSMSIG00000020727 #23 ENSMSIG00000020721 Lrp4 (ENSMSIG00000020667) #24 ENSMSIG00000020658 Ckap5 (ENSMSIG00000020211) #25 F2 (ENSMSIG00000020083) #26 Zfp408 (ENSMSIG00000020068) #27 Arhgap1 (ENSMSIG00000020000) #28 Atg13 (ENSMSIG00000019915) #30 Harbi1 (ENSMSIG00000019911) #31 Ambra1 (ENSMSIG00000019820) #32 Chrm4 (ENSMSIG00000019816) #33 Mdk (ENSMSIG00000019785) #34 ENSMSIG00000019782 #35 Dgkz (ENSMSIG00000019366) #36 Ryukyu mouse MODERN SPECIES 11 Mtch2 (MGP_CAROLIEiJ_G0023944) Madd (MGP_CAROLIEiJ_G0023945) #17 C1qtnf4 (MGP_CAROLIEiJ_G0023946) #7 Ndufs3 (MGP_CAROLIEiJ_G0023947) #8 Kbtbd4 (MGP_CAROLIEiJ_G0023948) #9 Celf1 (MGP_CAROLIEiJ_G0023949) #11 Rapsn (MGP_CAROLIEiJ_G0023950) #12 Psmc3 (MGP_CAROLIEiJ_G0023951) #13 Slc39a13 (MGP_CAROLIEiJ_G0023952) #14 Spi1 (MGP_CAROLIEiJ_G0023953) #15 Mybpc3 (MGP_CAROLIEiJ_G0023954) #16 Nr1h3 (MGP_CAROLIEiJ_G0023955) #18 Acp2 (MGP_CAROLIEiJ_G0023956) #19 Ddb2 (MGP_CAROLIEiJ_G0023957) #20 Pacsin3 (MGP_CAROLIEiJ_G0023958) #21 Arfgap2 (MGP_CAROLIEiJ_G0023959) #22 Cstpp1 (MGP_CAROLIEiJ_G0023960) #23 MGP_CAROLIEiJ_G0023961 Lrp4 (MGP_CAROLIEiJ_G0023962) #24 Ckap5 (MGP_CAROLIEiJ_G0023963) #25 F2 (MGP_CAROLIEiJ_G0023964) #26 Zfp408 (MGP_CAROLIEiJ_G0023965) #27 Arhgap1 (MGP_CAROLIEiJ_G0023966) #28 Atg13 (MGP_CAROLIEiJ_G0023967) #30 Harbi1 (MGP_CAROLIEiJ_G0023968) #31 Ambra1 (MGP_CAROLIEiJ_G0023969) #32 Chrm4 (MGP_CAROLIEiJ_G0023970) #33 Mdk (MGP_CAROLIEiJ_G0023971) #34 Dgkz (MGP_CAROLIEiJ_G0023972) #36 MGP_CAROLIEiJ_G0023973 #35 Creb3l1 (MGP_CAROLIEiJ_G0023974) #37 Shrew mouse MODERN SPECIES 16 Mtch2 (MGP_PahariEiJ_G0025381) C1qtnf4 (MGP_PahariEiJ_G0025382) #7 Ndufs3 (MGP_PahariEiJ_G0025383) #8 Kbtbd4 (MGP_PahariEiJ_G0025384) #9 Celf1 (MGP_PahariEiJ_G0025385) #11 Rapsn (MGP_PahariEiJ_G0025386) #12 Psmc3 (MGP_PahariEiJ_G0025387) #13 Slc39a13 (MGP_PahariEiJ_G0025388) #14 Spi1 (MGP_PahariEiJ_G0025389) #15 Mybpc3 (MGP_PahariEiJ_G0025390) #16 Madd (MGP_PahariEiJ_G0025391) #17 Nr1h3 (MGP_PahariEiJ_G0025392) #18 Acp2 (MGP_PahariEiJ_G0025393) #19 Ddb2 (MGP_PahariEiJ_G0025394) #20 Pacsin3 (MGP_PahariEiJ_G0025395) #21 Arfgap2 (MGP_PahariEiJ_G0025396) #22 Cstpp1 (MGP_PahariEiJ_G0025397) #23 MGP_PahariEiJ_G0025398 Lrp4 (MGP_PahariEiJ_G0025399) #24 Ckap5 (MGP_PahariEiJ_G0025400) #25 F2 (MGP_PahariEiJ_G0025401) #26 Zfp408 (MGP_PahariEiJ_G0025402) #27 Arhgap1 (MGP_PahariEiJ_G0025403) #28 Atg13 (MGP_PahariEiJ_G0025404) #30 Harbi1 (MGP_PahariEiJ_G0025405) #31 Ambra1 (MGP_PahariEiJ_G0025406) #32 Chrm4 (MGP_PahariEiJ_G0025407) #33 Mdk (MGP_PahariEiJ_G0025408) #34 Dgkz (MGP_PahariEiJ_G0025409) #36 MGP_PahariEiJ_G0025410 #35 Creb3l1 (MGP_PahariEiJ_G0025411) #37 Rat MODERN SPECIES 13 C1qtnf4 (ENSRNOG00000069579) #7 Ndufs3 (ENSRNOG00000009155) #8 Kbtbd4 (ENSRNOG00000009397) #9 Ptpmt1 (ENSRNOG00000009723) #10 Celf1 (ENSRNOG00000010379) #11 Rapsn (ENSRNOG00000011208) #12 Psmc3 (ENSRNOG00000011414) #13 Slc39a13 (ENSRNOG00000011981) #14 Spi1 (ENSRNOG00000012172) #15 Mybpc3 (ENSRNOG00000012307) #16 Madd (ENSRNOG00000012568) #17 Nr1h3 (ENSRNOG00000013172) #18 Acp2 (ENSRNOG00000013594) #19 Ddb2 (ENSRNOG00000014071) #20 Pacsin3 (ENSRNOG00000014204) #21 Arfgap2 (ENSRNOG00000014429) #22 Cstpp1 (ENSRNOG00000014798) #23 Lrp4 (ENSRNOG00000015285) #24 Ckap5 (ENSRNOG00000016067) #25 F2 (ENSRNOG00000016325) #26 ENSRNOG00000070459 #27 Arhgap1 (ENSRNOG00000016610) #28 Atg13 (ENSRNOG00000016984) #30 Ambra1 (ENSRNOG00000017422) #32 Chrm4 (ENSRNOG00000017556) #33 Mdk (ENSRNOG00000017560) #34 Dgkz (ENSRNOG00000017737) #36 Creb3l1 (ENSRNOG00000005413) #37 Phf21a (ENSRNOG00000006063) Large2 (ENSRNOG00000006353) Pex16 (ENSRNOG00000006539) Upper Galilee mountains blind mole rat MODERN SPECIES 1238 Ndufs3 (ENSNGAG00000012046) #8 Kbtbd4 (ENSNGAG00000000276) #9 Ptpmt1 (ENSNGAG00000017776) #10 ENSNGAG00000018260 Celf1 (ENSNGAG00000017390) #11 Rapsn (ENSNGAG00000007295) #12 Psmc3 (ENSNGAG00000017843) #13 Slc39a13 (ENSNGAG00000017536) #14 Spi1 (ENSNGAG00000010713) #15 Mybpc3 (ENSNGAG00000000260) #16 Madd (ENSNGAG00000017768) #17 Nr1h3 (ENSNGAG00000015402) #18 Acp2 (ENSNGAG00000007455) #19 Ddb2 (ENSNGAG00000017336) #20 Pacsin3 (ENSNGAG00000014205) #21 Arfgap2 (ENSNGAG00000009124) #22 Cstpp1 (ENSNGAG00000000171) #23 Lrp4 (ENSNGAG00000020436) #24 Ckap5 (ENSNGAG00000001579) #25 F2 (ENSNGAG00000010351) #26 Zfp408 (ENSNGAG00000000309) #27 Arhgap1 (ENSNGAG00000013969) #28 Atg13 (ENSNGAG00000015785) #30 ENSNGAG00000012504 Lesser Egyptian jerboa MODERN SPECIES 62 Mtch2 (ENSJJAG00000011880) C1qtnf4 (ENSJJAG00000023278) #7 Ndufs3 (ENSJJAG00000023557) #8 Kbtbd4 (ENSJJAG00000020543) #9 Celf1 (ENSJJAG00000020280) #11 Rapsn (ENSJJAG00000020297) #12 Psmc3 (ENSJJAG00000021354) #13 Slc39a13 (ENSJJAG00000007370) #14 Spi1 (ENSJJAG00000019221) #15 Mybpc3 (ENSJJAG00000018706) #16 Madd (ENSJJAG00000015606) #17 Nr1h3 (ENSJJAG00000020697) #18 Acp2 (ENSJJAG00000019515) #19 Ddb2 (ENSJJAG00000016552) #20 Pacsin3 (ENSJJAG00000023252) #21 Arfgap2 (ENSJJAG00000003129) #22 Cstpp1 (ENSJJAG00000008330) #23 Lrp4 (ENSJJAG00000014851) #24 Ckap5 (ENSJJAG00000023265) #25 F2 (ENSJJAG00000005619) #26 Zfp408 (ENSJJAG00000015381) #27 Arhgap1 (ENSJJAG00000022610) #28 Atg13 (ENSJJAG00000024173) #30 ENSJJAG00000015195 ENSJJAG00000016975 Ambra1 (ENSJJAG00000004138) #32 Chrm4 (ENSJJAG00000010466) #33 Mdk (ENSJJAG00000023305) #34 Dgkz (ENSJJAG00000003197) #36 Creb3l1 (ENSJJAG00000014152) #37 Phf21a (ENSJJAG00000016994) Kangaroo rat MODERN SPECIES 444 Mtch2 (ENSDORG00000001511) C1qtnf4 (ENSDORG00000015597) #7 Kbtbd4 (ENSDORG00000015593) #9 Ptpmt1 (ENSDORG00000015591) #10 Celf1 (ENSDORG00000013721) #11 Rapsn (ENSDORG00000000757) #12 Psmc3 (ENSDORG00000000756) #13 Slc39a13 (ENSDORG00000000753) #14 Spi1 (ENSDORG00000007758) #15 Mybpc3 (ENSDORG00000007751) #16 Madd (ENSDORG00000007749) #17 Nr1h3 (ENSDORG00000007747) #18 Acp2 (ENSDORG00000007743) #19 Ddb2 (ENSDORG00000007741) #20 ENSDORG00000013060 #21 Arfgap2 (ENSDORG00000013057) #22 Cstpp1 (ENSDORG00000013052) #23 Lrp4 (ENSDORG00000001785) #24 Ckap5 (ENSDORG00000011373) #25 F2 (ENSDORG00000029579) #26 Zfp408 (ENSDORG00000000387) #27 Arhgap1 (ENSDORG00000000385) #28 Atg13 (ENSDORG00000000382) #30 ENSDORG00000028941 Ambra1 (ENSDORG00000008382) #32 Chrm4 (ENSDORG00000024984) #33 Mdk (ENSDORG00000029447) #34 Dgkz (ENSDORG00000008377) #36 ENSDORG00000028371 #35 Creb3l1 (ENSDORG00000023541) #37 ENSDORG00000025559 Rodentia_A ANCESTRAL SPECIES 1 ENSGT00940000154479.a ENSGT00390000017480 #8 ENSGT00940000158775 #9 ENSGT00390000014065 #10 ENSGT00940000158970 #11 ENSGT00390000016785 #12 ENSGT01020000230346.E #13 ENSGT00940000157349 #14 ENSGT00940000159754 #15 ENSGT00940000157698.b #16 ENSGT00940000156718 #17 ENSGT00940000159068 #18 ENSGT00940000158446 #19 ENSGT00510000047881 #20 ENSGT00950000182973.b.a #21 ENSGT00940000155568 #22 ENSGT00390000012935 #23 ENSGT00940000158287 #24 ENSGT00390000014757 #25 ENSGT00940000154234.b #26 ENSGT00930000151062 #27 ENSGT00940000160630 #28 ENSGT00390000007055 #30 ENSGT00940000154348.c.b.a #31 ENSGT00390000016223 #32 ENSGT00940000160394.a #33 ENSGT00390000007640.b #34 ENSGT00940000156152 #36 ENSGT00860000136066 #35 ENSGT00940000159848 #37 ENSGT00940000156124 Sciuridae ANCESTRAL SPECIES 2 ENSGT00940000154479.a ENSGT00390000017480 #8 ENSGT00940000158775 #9 ENSGT00390000014065 #10 ENSGT00940000158970 #11 ENSGT00390000016785 #12 ENSGT01020000230346.E #13 ENSGT00940000157349 #14 ENSGT00940000159754 #15 ENSGT00940000157698.b #16 ENSGT00940000156718 #17 ENSGT00940000159068 #18 ENSGT00940000158446 #19 ENSGT00510000047881 #20 ENSGT00950000182973.b.a #21 ENSGT00940000155568 #22 ENSGT00390000012935 #23 ENSGT00940000158287 #24 ENSGT00390000014757 #25 ENSGT00940000154234.b #26 ENSGT00930000151062 #27 ENSGT00940000160630 #28 ENSGT00390000007055 #30 ENSGT00940000154348.c.b.a #31 ENSGT00390000016223 #32 ENSGT00940000160394.a #33 ENSGT00390000007640.b #34 ENSGT00940000156152 #36 ENSGT00940000159848 #37 ENSGT00940000156124 ENSGT00940000158758 Eurasian red squirrel MODERN SPECIES 2 PTPMT1 (ENSSVLG00005009417) #10 CELF1 (ENSSVLG00005009492) #11 RAPSN (ENSSVLG00005009920) #12 ENSSVLG00005009993 #13 ENSSVLG00005010167 #14 ENSSVLG00005010225 #13 ENSSVLG00005010302 #14 SPI1 (ENSSVLG00005010597) #15 MYBPC3 (ENSSVLG00005010729) #16 MADD (ENSSVLG00005011762) #17 ENSSVLG00005012055 NR1H3 (ENSSVLG00005012159) #18 ACP2 (ENSSVLG00005012397) #19 DDB2 (ENSSVLG00005012634) #20 PACSIN3 (ENSSVLG00005013010) #21 ARFGAP2 (ENSSVLG00005013354) #22 CSTPP1 (ENSSVLG00005013495) #23 LRP4 (ENSSVLG00005013702) #24 CKAP5 (ENSSVLG00005013939) #25 F2 (ENSSVLG00005014116) #26 ARHGAP1 (ENSSVLG00005014685) #28 ENSSVLG00005014869 #30 HARBI1 (ENSSVLG00005015510) #31 AMBRA1 (ENSSVLG00005015569) #32 CHRM4 (ENSSVLG00005015740) #33 MDK (ENSSVLG00005015782) #34 DGKZ (ENSSVLG00005015887) #36 ENSSVLG00005015926 CREB3L1 (ENSSVLG00005015955) #37 PHF21A (ENSSVLG00005016012) LARGE2 (ENSSVLG00005016132) Marmotini ANCESTRAL SPECIES 22 ENSGT00940000154479.a ENSGT00390000017480 #8 ENSGT00940000158775 #9 ENSGT00390000014065 #10 ENSGT00940000158970 #11 ENSGT00390000016785 #12 ENSGT01020000230346.E #13 ENSGT00940000157349 #14 ENSGT00940000159754 #15 ENSGT00940000157698.b #16 ENSGT00940000156718 #17 ENSGT00940000159068 #18 ENSGT00940000158446 #19 ENSGT00510000047881 #20 ENSGT00950000182973.b.a #21 ENSGT00940000155568 #22 ENSGT00390000012935 #23 ENSGT00940000158287 #24 ENSGT00390000014757 #25 ENSGT00940000154234.b #26 ENSGT00930000151062 #27 ENSGT00940000160630 #28 ENSGT00390000007055 #30 ENSGT00940000154348.c.b.a #31 ENSGT00390000016223 #32 ENSGT00940000160394.a #33 ENSGT00390000007640.b #34 ENSGT00940000156152 #36 ENSGT00940000159848 #37 ENSGT00940000156124 ENSGT00940000158758 Alpin marmot MODERN SPECIES 3 FAM180B (ENSMMMG00000015675) NDUFS3 (ENSMMMG00000015667) #8 KBTBD4 (ENSMMMG00000015654) #9 ENSMMMG00000015652 CELF1 (ENSMMMG00000015346) #11 RAPSN (ENSMMMG00000015294) #12 PSMC3 (ENSMMMG00000015270) #13 SLC39A13 (ENSMMMG00000015224) #14 SPI1 (ENSMMMG00000015212) #15 MYBPC3 (ENSMMMG00000015189) #16 MADD (ENSMMMG00000014606) #17 NR1H3 (ENSMMMG00000014541) #18 ACP2 (ENSMMMG00000014527) #19 DDB2 (ENSMMMG00000014518) #20 PACSIN3 (ENSMMMG00000014498) #21 ARFGAP2 (ENSMMMG00000014424) #22 CSTPP1 (ENSMMMG00000014382) #23 LRP4 (ENSMMMG00000014335) #24 CKAP5 (ENSMMMG00000013993) #25 F2 (ENSMMMG00000013961) #26 ZNF408 (ENSMMMG00000013944) #27 ARHGAP1 (ENSMMMG00000013934) #28 ATG13 (ENSMMMG00000013875) #30 HARBI1 (ENSMMMG00000013860) #31 AMBRA1 (ENSMMMG00000013284) #32 CHRM4 (ENSMMMG00000013278) #33 MDK (ENSMMMG00000013259) #34 DGKZ (ENSMMMG00000013155) #36 CREB3L1 (ENSMMMG00000013137) #37 PHF21A (ENSMMMG00000012404) LARGE2 (ENSMMMG00000012317) Marmotini_b ANCESTRAL SPECIES 23 ENSGT00940000154479.a ENSGT00390000017480 #8 ENSGT00940000158775 #9 ENSGT00390000014065 #10 ENSGT00940000158970 #11 ENSGT00390000016785 #12 ENSGT01020000230346.E #13 ENSGT00940000157349 #14 ENSGT00940000159754 #15 ENSGT00940000157698.b #16 ENSGT00940000156718 #17 ENSGT00940000159068 #18 ENSGT00940000158446 #19 ENSGT00510000047881 #20 ENSGT00950000182973.b.a #21 ENSGT00940000155568 #22 ENSGT00390000012935 #23 ENSGT00940000158287 #24 ENSGT00390000014757 #25 ENSGT00940000154234.b #26 ENSGT00930000151062 #27 ENSGT00940000160630 #28 ENSGT00390000007055 #30 ENSGT00940000154348.c.b.a #31 ENSGT00390000016223 #32 ENSGT00940000160394.a #33 ENSGT00390000007640.b #34 ENSGT00940000156152 #36 ENSGT00940000159848 #37 ENSGT00940000156124 ENSGT00940000158758 Squirrel MODERN SPECIES 162 FAM180B (ENSSTOG00000000628) NDUFS3 (ENSSTOG00000000622) #8 KBTBD4 (ENSSTOG00000020864) #9 PTPMT1 (ENSSTOG00000019770) #10 CELF1 (ENSSTOG00000000613) #11 RAPSN (ENSSTOG00000011047) #12 PSMC3 (ENSSTOG00000011038) #13 SLC39A13 (ENSSTOG00000027722) #14 SPI1 (ENSSTOG00000022735) #15 MYBPC3 (ENSSTOG00000026473) #16 MADD (ENSSTOG00000007626) #17 NR1H3 (ENSSTOG00000007611) #18 ACP2 (ENSSTOG00000007586) #19 DDB2 (ENSSTOG00000007571) #20 PACSIN3 (ENSSTOG00000007547) #21 ARFGAP2 (ENSSTOG00000007524) #22 CSTPP1 (ENSSTOG00000007512) #23 LRP4 (ENSSTOG00000005236) #24 CKAP5 (ENSSTOG00000005158) #25 F2 (ENSSTOG00000005130) #26 ZNF408 (ENSSTOG00000005114) #27 ARHGAP1 (ENSSTOG00000026557) #28 ATG13 (ENSSTOG00000005077) #30 HARBI1 (ENSSTOG00000005072) #31 AMBRA1 (ENSSTOG00000019411) #32 CHRM4 (ENSSTOG00000022455) #33 MDK (ENSSTOG00000027636) #34 DGKZ (ENSSTOG00000012704) #36 CREB3L1 (ENSSTOG00000012697) #37 PHF21A (ENSSTOG00000011552) LARGE2 (ENSSTOG00000011545) Arctic ground squirrel DUPLICATION Arctic ground squirrel MODERN SPECIES 45 RAB3IP (ENSUPAG00010023415) MYRFL (ENSUPAG00010023416) CNOT2 (ENSUPAG00010023418) KCNMB4 (ENSUPAG00010023419) PTPRB (ENSUPAG00010023420) ENSUPAG00010023422 PTPRR (ENSUPAG00010023424) TSPAN8 (ENSUPAG00010023425) LGR5 (ENSUPAG00010023426) ZFC3H1 (ENSUPAG00010023427) THAP2 (ENSUPAG00010023428) TMEM19 (ENSUPAG00010023429) RAB21 (ENSUPAG00010023430) TBC1D15 (ENSUPAG00010023431) TPH2 (ENSUPAG00010023432) ENSUPAG00010023433 #22 TRHDE (ENSUPAG00010023434) ENSUPAG00010023435 ENSUPAG00010023436 Arctic ground squirrel MODERN SPECIES 208 NDUFS3 (ENSUPAG00010014067) #8 KBTBD4 (ENSUPAG00010014056) #9 ENSUPAG00010014045 CELF1 (ENSUPAG00010013973) #11 RAPSN (ENSUPAG00010013926) #12 PSMC3 (ENSUPAG00010013908) #13 SLC39A13 (ENSUPAG00010013855) #14 SPI1 (ENSUPAG00010013850) #15 ENSUPAG00010013841 MYBPC3 (ENSUPAG00010013812) #16 MADD (ENSUPAG00010011229) #17 NR1H3 (ENSUPAG00010011188) #18 ACP2 (ENSUPAG00010011162) #19 DDB2 (ENSUPAG00010011149) #20 PACSIN3 (ENSUPAG00010011141) #21 ARFGAP2 (ENSUPAG00010011117) #22 CSTPP1 (ENSUPAG00010011093) #23 LRP4 (ENSUPAG00010011049) #24 CKAP5 (ENSUPAG00010010730) #25 F2 (ENSUPAG00010010714) #26 ZNF408 (ENSUPAG00010010704) #27 ARHGAP1 (ENSUPAG00010010696) #28 ATG13 (ENSUPAG00010010621) #30 HARBI1 (ENSUPAG00010010611) #31 AMBRA1 (ENSUPAG00010010430) #32 CHRM4 (ENSUPAG00010010417) #33 MDK (ENSUPAG00010010379) #34 DGKZ (ENSUPAG00010010211) #36 CREB3L1 (ENSUPAG00010010194) #37 PHF21A (ENSUPAG00010009105) LARGE2 (ENSUPAG00010008955) Hystricomorpha ANCESTRAL SPECIES 16 ENSGT00940000161832.a #7 ENSGT00390000017480 #8 ENSGT00940000158775 #9 ENSGT00390000014065 #10 ENSGT00940000158970 #11 ENSGT00390000016785 #12 ENSGT01020000230346.E #13 ENSGT00940000157349 #14 ENSGT00940000159754 #15 ENSGT00940000157698.b #16 ENSGT00940000156718 #17 ENSGT00940000159068 #18 ENSGT00940000158446 #19 ENSGT00510000047881 #20 ENSGT00950000182973.b.a #21 ENSGT00940000155568 #22 ENSGT00390000012935 #23 ENSGT00940000158287 #24 ENSGT00390000014757 #25 ENSGT00940000154234.b #26 ENSGT00940000160630 #28 ENSGT00390000007055 #30 ENSGT00940000154348.c.b.a #31 ENSGT00390000016223 #32 ENSGT00940000160394.a #33 ENSGT00390000007640.b #34 ENSGT00940000156152 #36 ENSGT00860000136066 #35 ENSGT00940000159848 #37 ENSGT00940000156124 ENSGT00940000158758 Naked mole-rat female MODERN SPECIES 14 ENSHGLG00000043784 MTCH2 (ENSHGLG00000017536) FAM180B (ENSHGLG00000038229) NDUFS3 (ENSHGLG00000018368) #8 KBTBD4 (ENSHGLG00000047234) #9 ENSHGLG00000037048 ENSHGLG00000006909 #11 RAPSN (ENSHGLG00000008521) #12 PSMC3 (ENSHGLG00000005713) #13 SLC39A13 (ENSHGLG00000041087) #14 ENSHGLG00000011456 #15 ENSHGLG00000044290 #16 NR1H3 (ENSHGLG00000014541) #18 ENSHGLG00000036516 #19 DDB2 (ENSHGLG00000018689) #20 ENSHGLG00000040462 #22 CSTPP1 (ENSHGLG00000018725) #23 ARHGAP1 (ENSHGLG00000017685) #28 ENSHGLG00000013428 #30 ENSHGLG00000018447 #31 AMBRA1 (ENSHGLG00000017564) #32 ENSHGLG00000034290 ENSHGLG00000042531 ENSHGLG00000032476 #36 CREB3L1 (ENSHGLG00000048284) #37 ENSHGLG00000033741 ENSHGLG00000037709 ENSHGLG00000050302 ENSHGLG00000032419 PEX16 (ENSHGLG00000019544) CRY2 (ENSHGLG00000013242) Hystricomorpha_a ANCESTRAL SPECIES 12 ENSGT00940000161832.a #7 ENSGT00390000017480 #8 ENSGT00940000158775 #9 ENSGT00390000014065 #10 ENSGT00940000158970 #11 ENSGT00390000016785 #12 ENSGT01020000230346.E #13 ENSGT00940000157349 #14 ENSGT00940000159754 #15 ENSGT00940000157698.b #16 ENSGT00940000156718 #17 ENSGT00940000159068 #18 ENSGT00940000158446 #19 ENSGT00510000047881 #20 ENSGT00950000182973.b.a #21 ENSGT00940000155568 #22 ENSGT00390000012935 #23 ENSGT00940000158287 #24 ENSGT00390000014757 #25 ENSGT00940000154234.b #26 ENSGT00940000160630 #28 ENSGT00390000007055 #30 ENSGT00940000154348.c.b.a #31 ENSGT00390000016223 #32 ENSGT00940000160394.a #33 ENSGT00390000007640.b #34 ENSGT00940000156152 #36 ENSGT00860000136066 #35 ENSGT00940000159848 #37 ENSGT00940000156124 ENSGT00940000158758 Guinea pig MODERN SPECIES 72 C1QTNF4 (ENSCPOG00000023948) #7 NDUFS3 (ENSCPOG00000006141) #8 KBTBD4 (ENSCPOG00000019448) #9 PTPMT1 (ENSCPOG00000031147) #10 CELF1 (ENSCPOG00000036381) #11 RAPSN (ENSCPOG00000015456) #12 PSMC3 (ENSCPOG00000008176) #13 SLC39A13 (ENSCPOG00000008169) #14 SPI1 (ENSCPOG00000022138) #15 MYBPC3 (ENSCPOG00000013368) #16 MADD (ENSCPOG00000013364) #17 NR1H3 (ENSCPOG00000013362) #18 ACP2 (ENSCPOG00000013359) #19 DDB2 (ENSCPOG00000013358) #20 PACSIN3 (ENSCPOG00000013356) #21 ARFGAP2 (ENSCPOG00000013352) #22 CSTPP1 (ENSCPOG00000020334) #23 LRP4 (ENSCPOG00000007072) #24 CKAP5 (ENSCPOG00000007054) #25 F2 (ENSCPOG00000026682) #26 ARHGAP1 (ENSCPOG00000013046) #28 ATG13 (ENSCPOG00000013042) #30 HARBI1 (ENSCPOG00000037304) #31 AMBRA1 (ENSCPOG00000007341) #32 CHRM4 (ENSCPOG00000020788) #33 MDK (ENSCPOG00000007340) #34 DGKZ (ENSCPOG00000009636) #36 CREB3L1 (ENSCPOG00000010073) #37 PHF21A (ENSCPOG00000001299) LARGE2 (ENSCPOG00000033339) PEX16 (ENSCPOG00000027497) Hystricomorpha_b ANCESTRAL SPECIES 10 ENSGT00390000000020.b ENSGT00940000161832.a #7 ENSGT00390000017480 #8 ENSGT00940000158775 #9 ENSGT00940000158970 #11 ENSGT00390000016785 #12 ENSGT01020000230346.E #13 ENSGT00940000157349 #14 ENSGT00940000159754 #15 ENSGT00940000157698.b #16 ENSGT00940000156718 #17 ENSGT00940000159068 #18 ENSGT00940000158446 #19 ENSGT00510000047881 #20 ENSGT00950000182973.b.a #21 ENSGT00940000155568 #22 ENSGT00390000012935 #23 ENSGT00940000158287 #24 ENSGT00390000014757 #25 ENSGT00940000154234.b #26 ENSGT00940000160630 #28 ENSGT00390000007055 #30 ENSGT00940000154348.c.b.a #31 ENSGT00390000016223 #32 ENSGT00940000160394.a #33 ENSGT00390000007640.b #34 ENSGT00940000156152 #36 ENSGT00860000136066 #35 ENSGT00940000159848 #37 ENSGT00940000156124 ENSGT00940000158758 Degu MODERN SPECIES 59 FNBP4 (ENSODEG00000016574) AGBL2 (ENSODEG00000016111) MTCH2 (ENSODEG00000015416) NDUFS3 (ENSODEG00000015948) #8 KBTBD4 (ENSODEG00000015830) #9 CELF1 (ENSODEG00000015204) #11 RAPSN (ENSODEG00000015194) #12 ENSODEG00000016550 #13 SLC39A13 (ENSODEG00000015895) #14 SPI1 (ENSODEG00000015369) #15 MYBPC3 (ENSODEG00000016030) #16 MADD (ENSODEG00000017645) #17 NR1H3 (ENSODEG00000016180) #18 ACP2 (ENSODEG00000015528) #19 ENSODEG00000015965 #21 ENSODEG00000016456 #22 CSTPP1 (ENSODEG00000016656) #23 LRP4 (ENSODEG00000015720) #24 CKAP5 (ENSODEG00000016409) #25 F2 (ENSODEG00000016157) #26 ARHGAP1 (ENSODEG00000016156) #28 ATG13 (ENSODEG00000017294) #30 ENSODEG00000016339 AMBRA1 (ENSODEG00000016633) #32 CHRM4 (ENSODEG00000020352) #33 MDK (ENSODEG00000015931) #34 DGKZ (ENSODEG00000016309) #36 ENSODEG00000016420 #36 ENSODEG00000016039 #35 CREB3L1 (ENSODEG00000016017) #37 ENSODEG00000016348 Long-tailed chinchilla MODERN SPECIES 129 MTCH2 (ENSCLAG00000012026) C1QTNF4 (ENSCLAG00000015186) #7 NDUFS3 (ENSCLAG00000014873) #8 KBTBD4 (ENSCLAG00000016255) #9 CELF1 (ENSCLAG00000011791) #11 RAPSN (ENSCLAG00000015497) #12 PSMC3 (ENSCLAG00000013916) #13 SLC39A13 (ENSCLAG00000014480) #14 SPI1 (ENSCLAG00000017201) #15 MYBPC3 (ENSCLAG00000015418) #16 MADD (ENSCLAG00000012503) #17 NR1H3 (ENSCLAG00000013563) #18 ACP2 (ENSCLAG00000014608) #19 DDB2 (ENSCLAG00000016473) #20 ENSCLAG00000012709 #21 ARFGAP2 (ENSCLAG00000016467) #22 CSTPP1 (ENSCLAG00000014110) #23 LRP4 (ENSCLAG00000016159) #24 CKAP5 (ENSCLAG00000015801) #25 F2 (ENSCLAG00000015618) #26 ARHGAP1 (ENSCLAG00000013542) #28 ATG13 (ENSCLAG00000015328) #30 HARBI1 (ENSCLAG00000013578) #31 AMBRA1 (ENSCLAG00000015156) #32 CHRM4 (ENSCLAG00000013251) #33 MDK (ENSCLAG00000014462) #34 DGKZ (ENSCLAG00000016057) #36 ENSCLAG00000014194 #35 CREB3L1 (ENSCLAG00000013609) #37 PHF21A (ENSCLAG00000016632) LARGE2 (ENSCLAG00000014846) Lagomorpha ANCESTRAL SPECIES 4 ENSGT00940000161832.a #7 ENSGT00940000154479.a ENSGT00390000017480 #8 ENSGT00940000158775 #9 ENSGT00390000014065 #10 ENSGT00940000158970 #11 ENSGT00390000016785 #12 ENSGT01020000230346.E #13 ENSGT00940000157349 #14 ENSGT00940000157698.b #16 ENSGT00940000156718 #17 ENSGT00940000159068 #18 ENSGT00940000158446 #19 ENSGT00510000047881 #20 ENSGT00950000182973.b.a #21 ENSGT00940000155568 #22 ENSGT00390000012935 #23 ENSGT00940000158287 #24 ENSGT00390000014757 #25 ENSGT00940000164059 ENSGT00930000151062 #27 ENSGT00940000160630 #28 ENSGT00390000007055 #30 ENSGT00940000154348.c.b.a #31 ENSGT00390000016223 #32 ENSGT00940000160394.a #33 ENSGT00940000156152 #36 ENSGT00940000159848 #37 ENSGT00940000156124 ENSGT00940000158758 ENSGT00390000017790 Pika MODERN SPECIES 3586 MYBPC3 (ENSOPRG00000009569) #16 MADD (ENSOPRG00000009509) #17 NR1H3 (ENSOPRG00000009497) #18 ACP2 (ENSOPRG00000009485) #19 DDB2 (ENSOPRG00000009468) #20 PACSIN3 (ENSOPRG00000009451) #21 ARFGAP2 (ENSOPRG00000009432) #22 CSTPP1 (ENSOPRG00000009417) #23 LRP4 (ENSOPRG00000009347) #24 CKAP5 (ENSOPRG00000009287) #25 ENSOPRG00000009249 ZNF408 (ENSOPRG00000009225) #27 ARHGAP1 (ENSOPRG00000009201) #28 ATG13 (ENSOPRG00000009172) #30 Rabbit DUPLICATION Rabbit MODERN SPECIES 589 ENSOCUG00000023950 ENSOCUG00000035072 #22 ENSOCUG00000034227 Rabbit DUPLICATION Rabbit DUPLICATION Rabbit DUPLICATION Rabbit MODERN SPECIES 4 RHEB (ENSOCUG00000013173) ENSOCUG00000029750 ENSOCUG00000034117 PRKAG2 (ENSOCUG00000006463) ENSOCUG00000021944 GALNTL5 (ENSOCUG00000011307) GALNT11 (ENSOCUG00000011317) KMT2C (ENSOCUG00000011322) CCT8L2 (ENSOCUG00000000742) ENSOCUG00000000459 DPP6 (ENSOCUG00000012252) ENSOCUG00000029811 PAXIP1 (ENSOCUG00000023370) ENSOCUG00000036173 ENSOCUG00000017862 ENSOCUG00000025648 #22 ENSOCUG00000036066 ENSOCUG00000023248 #22 SUCO (ENSOCUG00000007590) ENSOCUG00000038737 C1orf105 (ENSOCUG00000029014) ENSOCUG00000006005 DNM3 (ENSOCUG00000005995) ENSOCUG00000036384 METTL13 (ENSOCUG00000008257) VAMP4 (ENSOCUG00000015967) MYOC (ENSOCUG00000015957) MYOCOS (ENSOCUG00000030327) PRRC2C (ENSOCUG00000015914) ENSOCUG00000036962 CCDC181 (ENSOCUG00000000852) Rabbit MODERN SPECIES 4 ENSOCUG00000038027 SLC19A2 (ENSOCUG00000025548) CCDC181 (ENSOCUG00000000852) ENSOCUG00000036962 PRRC2C (ENSOCUG00000015914) MYOCOS (ENSOCUG00000030327) MYOC (ENSOCUG00000015957) VAMP4 (ENSOCUG00000015967) METTL13 (ENSOCUG00000008257) ENSOCUG00000036384 DNM3 (ENSOCUG00000005995) ENSOCUG00000006005 C1orf105 (ENSOCUG00000029014) ENSOCUG00000038737 SUCO (ENSOCUG00000007590) ENSOCUG00000023248 #22 ENSOCUG00000036066 ENSOCUG00000025648 #22 ENSOCUG00000017862 ENSOCUG00000036173 PAXIP1 (ENSOCUG00000023370) ENSOCUG00000029811 DPP6 (ENSOCUG00000012252) ENSOCUG00000000459 CCT8L2 (ENSOCUG00000000742) KMT2C (ENSOCUG00000011322) GALNT11 (ENSOCUG00000011317) GALNTL5 (ENSOCUG00000011307) ENSOCUG00000021944 PRKAG2 (ENSOCUG00000006463) ENSOCUG00000034117 Rabbit MODERN SPECIES 610 ENSOCUG00000021595 ENSOCUG00000007142 #22 ENSOCUG00000024614 ENSOCUG00000031858 ENSOCUG00000016127 Rabbit MODERN SPECIES C1QTNF4 (ENSOCUG00000006365) #7 FAM180B (ENSOCUG00000006361) NDUFS3 (ENSOCUG00000006359) #8 KBTBD4 (ENSOCUG00000006353) #9 PTPMT1 (ENSOCUG00000021229) #10 CELF1 (ENSOCUG00000001311) #11 RAPSN (ENSOCUG00000008892) #12 PSMC3 (ENSOCUG00000026980) #13 SLC39A13 (ENSOCUG00000005557) #14 MYBPC3 (ENSOCUG00000002112) #16 MADD (ENSOCUG00000002099) #17 NR1H3 (ENSOCUG00000002095) #18 ACP2 (ENSOCUG00000013342) #19 DDB2 (ENSOCUG00000002076) #20 PACSIN3 (ENSOCUG00000027715) #21 ENSOCUG00000002073 #22 CSTPP1 (ENSOCUG00000002066) #23 LRP4 (ENSOCUG00000002052) #24 CKAP5 (ENSOCUG00000016200) #25 ZNF408 (ENSOCUG00000010953) #27 ARHGAP1 (ENSOCUG00000016160) #28 ATG13 (ENSOCUG00000016144) #30 HARBI1 (ENSOCUG00000016137) #31 AMBRA1 (ENSOCUG00000016117) #32 CHRM4 (ENSOCUG00000021064) #33 ENSOCUG00000024752 #36 CREB3L1 (ENSOCUG00000004418) #37 PHF21A (ENSOCUG00000001675) LARGE2 (ENSOCUG00000001671) PEX16 (ENSOCUG00000001670) ENSOCUG00000023020 Tree shrew MODERN SPECIES 2428 ENSTBEG00000007718 #21 ARFGAP2 (ENSTBEG00000006506) #22 CSTPP1 (ENSTBEG00000005477) #23 Primates ANCESTRAL SPECIES ENSGT00940000154479.a ENSGT00390000017480 #8 ENSGT00940000158775 #9 ENSGT00390000014065 #10 ENSGT00940000158970 #11 ENSGT00390000016785 #12 ENSGT01020000230346.E #13 ENSGT00940000157349 #14 ENSGT00940000159754 #15 ENSGT00940000157698.b #16 ENSGT00940000156718 #17 ENSGT00940000159068 #18 ENSGT00940000158446 #19 ENSGT00510000047881 #20 ENSGT00950000182973.b.a #21 ENSGT00940000155568 #22 ENSGT00390000012935 #23 ENSGT00940000158287 #24 ENSGT00390000014757 #25 ENSGT00940000154234.b #26 ENSGT00930000151062 #27 ENSGT00940000160630 #28 ENSGT00390000007055 #30 ENSGT00940000154348.c.b.a #31 ENSGT00910000148141 ENSGT00390000016223 #32 ENSGT00940000160394.a #33 ENSGT00390000007640.b #34 ENSGT00940000156152 #36 ENSGT00940000159848 #37 ENSGT00940000156124 Haplorrhini ANCESTRAL SPECIES ENSGT00940000154479.a ENSGT00390000017480 #8 ENSGT00940000158775 #9 ENSGT00390000014065 #10 ENSGT00940000158970 #11 ENSGT00390000016785 #12 ENSGT01020000230346.E #13 ENSGT00940000157349 #14 ENSGT00940000159754 #15 ENSGT00940000157698.b #16 ENSGT00940000156718 #17 ENSGT00940000159068 #18 ENSGT00940000158446 #19 ENSGT00510000047881 #20 ENSGT00950000182973.b.a #21 ENSGT00940000155568 #22 ENSGT00390000012935 #23 ENSGT00940000158287 #24 ENSGT00390000014757 #25 ENSGT00940000154234.b #26 ENSGT00930000151062 #27 ENSGT00940000160630 #28 ENSGT00390000007055 #30 ENSGT00940000154348.c.b.a #31 ENSGT00910000148141 ENSGT00390000016223 #32 ENSGT00940000160394.a #33 ENSGT00390000007640.b #34 ENSGT00940000156152 #36 ENSGT00940000159848 #37 ENSGT00940000156124 Simiiformes ANCESTRAL SPECIES ENSGT00940000154479.a ENSGT00390000017480 #8 ENSGT00940000158775 #9 ENSGT00390000014065 #10 ENSGT00940000158970 #11 ENSGT00390000016785 #12 ENSGT01020000230346.E.s.b #13 ENSGT00940000157349 #14 ENSGT00940000159754 #15 ENSGT00940000157698.b #16 ENSGT00940000156718 #17 ENSGT00940000159068 #18 ENSGT00940000158446 #19 ENSGT00510000047881 #20 ENSGT00950000182973.b.a #21 ENSGT00940000155568 #22 ENSGT00390000012935 #23 ENSGT00940000158287 #24 ENSGT00390000014757 #25 ENSGT00940000154234.b #26 ENSGT00930000151062 #27 ENSGT00940000160630 #28 ENSGT00390000007055 #30 ENSGT00940000154348.c.b.a #31 ENSGT00910000148141 ENSGT00390000016223 #32 ENSGT00940000160394.a #33 ENSGT00390000007640.b #34 ENSGT00940000156152 #36 ENSGT00940000159848 #37 ENSGT00940000156124 Catarrhini ANCESTRAL SPECIES 1 ENSGT00940000154479.a ENSGT00390000017480 #8 ENSGT00940000158775 #9 ENSGT00390000014065 #10 ENSGT00940000158970 #11 ENSGT00390000016785 #12 ENSGT01020000230346.E.s.b #13 ENSGT00940000157349 #14 ENSGT00940000159754 #15 ENSGT00940000157698.b #16 ENSGT00940000156718 #17 ENSGT00940000159068 #18 ENSGT00940000158446 #19 ENSGT00510000047881 #20 ENSGT00950000182973.b.a #21 ENSGT00940000155568 #22 ENSGT00390000012935 #23 ENSGT00940000158287 #24 ENSGT00390000014757 #25 ENSGT00940000154234.b #26 ENSGT00930000151062 #27 ENSGT00940000160630 #28 ENSGT00390000007055 #30 ENSGT00940000154348.c.b.a #31 ENSGT00910000148141 ENSGT00390000016223 #32 ENSGT00940000160394.a #33 ENSGT00390000007640.b #34 ENSGT00940000156152 #36 ENSGT00940000159848 #37 ENSGT00940000156124 Hominoidea ANCESTRAL SPECIES 1 ENSGT00940000154479.a ENSGT00390000017480 #8 ENSGT00940000158775 #9 ENSGT00390000014065 #10 ENSGT00940000158970 #11 ENSGT00390000016785 #12 ENSGT01020000230346.E.s.b #13 ENSGT00940000157349 #14 ENSGT00940000159754 #15 ENSGT00940000157698.b #16 ENSGT00940000156718 #17 ENSGT00940000159068 #18 ENSGT00940000158446 #19 ENSGT00510000047881 #20 ENSGT00950000182973.b.a #21 ENSGT00940000155568 #22 ENSGT00390000012935 #23 ENSGT00940000158287 #24 ENSGT00390000014757 #25 ENSGT00940000154234.b #26 ENSGT00930000151062 #27 ENSGT00940000160630 #28 ENSGT00390000007055 #30 ENSGT00940000154348.c.b.a #31 ENSGT00910000148141 ENSGT00390000016223 #32 ENSGT00940000160394.a #33 ENSGT00390000007640.b #34 ENSGT00940000156152 #36 ENSGT00940000159848 #37 ENSGT00940000156124 Hominidae ANCESTRAL SPECIES 1 ENSGT00940000154479.a ENSGT00390000017480 #8 ENSGT00940000158775 #9 ENSGT00390000014065 #10 ENSGT00940000158970 #11 ENSGT00390000016785 #12 ENSGT01020000230346.E.s.b #13 ENSGT00940000157349 #14 ENSGT00940000159754 #15 ENSGT00940000157698.b #16 ENSGT00940000156718 #17 ENSGT00940000159068 #18 ENSGT00940000158446 #19 ENSGT00510000047881 #20 ENSGT00950000182973.b.a #21 ENSGT00940000155568 #22 ENSGT00390000012935 #23 ENSGT00940000158287 #24 ENSGT00390000014757 #25 ENSGT00940000154234.b #26 ENSGT00930000151062 #27 ENSGT00940000160630 #28 ENSGT00390000007055 #30 ENSGT00940000154348.c.b.a #31 ENSGT00390000016223 #32 ENSGT00940000160394.a #33 ENSGT00390000007640.b #34 ENSGT00940000156152 #36 ENSGT00940000159848 #37 ENSGT00940000156124 ENSGT00940000158758 Homo/Pan/Gorilla group ANCESTRAL SPECIES 20 ENSGT00940000154479.a ENSGT00390000017480 #8 ENSGT00940000158775 #9 ENSGT00390000014065 #10 ENSGT00940000158970 #11 ENSGT00390000016785 #12 ENSGT01020000230346.E.s.b #13 ENSGT00940000157349 #14 ENSGT00940000159754 #15 ENSGT00940000157698.b #16 ENSGT00940000156718 #17 ENSGT00940000159068 #18 ENSGT00940000158446 #19 ENSGT00510000047881 #20 ENSGT00950000182973.b.a #21 ENSGT00940000155568 #22 ENSGT00390000012935 #23 ENSGT00940000158287 #24 ENSGT00390000014757 #25 ENSGT00940000154234.b #26 ENSGT00930000151062 #27 ENSGT00940000160630 #28 ENSGT00390000007055 #30 ENSGT00940000154348.c.b.a #31 ENSGT00390000016223 #32 ENSGT00940000160394.a #33 ENSGT00390000007640.b #34 ENSGT00940000156152 #36 ENSGT00940000159848 #37 ENSGT00940000156124 ENSGT00940000158758 Homo/Pan group ANCESTRAL SPECIES 1 ENSGT00940000154479.a ENSGT00390000017480 #8 ENSGT00940000158775 #9 ENSGT00390000014065 #10 ENSGT00940000158970 #11 ENSGT00390000016785 #12 ENSGT01020000230346.E.s.b #13 ENSGT00940000157349 #14 ENSGT00940000159754 #15 ENSGT00940000157698.b #16 ENSGT00940000156718 #17 ENSGT00940000159068 #18 ENSGT00940000158446 #19 ENSGT00510000047881 #20 ENSGT00950000182973.b.a #21 ENSGT00940000155568 #22 ENSGT00390000012935 #23 ENSGT00940000158287 #24 ENSGT00390000014757 #25 ENSGT00940000154234.b #26 ENSGT00930000151062 #27 ENSGT00940000160630 #28 ENSGT00390000007055 #30 ENSGT00940000154348.c.b.a #31 ENSGT00390000016223 #32 ENSGT00940000160394.a #33 ENSGT00390000007640.b #34 ENSGT00940000156152 #36 ENSGT00940000159848 #37 ENSGT00940000156124 ENSGT00940000158758 Pan ANCESTRAL SPECIES 1 ENSGT00390000017480 #8 ENSGT00940000158775 #9 ENSGT00390000014065 #10 ENSGT00940000158970 #11 ENSGT00390000016785 #12 ENSGT01020000230346.E.s.b #13 ENSGT00940000157349 #14 ENSGT00940000159754 #15 ENSGT00940000157698.b #16 ENSGT00940000156718 #17 ENSGT00940000159068 #18 ENSGT00940000158446 #19 ENSGT00510000047881 #20 ENSGT00390000003248.a.b.a.b ENSGT00950000182973.b.a #21 ENSGT00940000155568 #22 ENSGT00390000012935 #23 ENSGT00940000158287 #24 ENSGT00390000014757 #25 ENSGT00940000154234.b #26 ENSGT00930000151062 #27 ENSGT00940000160630 #28 ENSGT00390000007055 #30 ENSGT00940000154348.c.b.a #31 ENSGT00390000016223 #32 ENSGT00940000160394.a #33 ENSGT00390000007640.b #34 ENSGT00940000156152 #36 ENSGT00940000159848 #37 ENSGT00940000156124 ENSGT00940000158758 Chimpanzee MODERN SPECIES 2 NDUFS3 (ENSPTRG00000003571) #8 KBTBD4 (ENSPTRG00000003570) #9 PTPMT1 (ENSPTRG00000033944) #10 CELF1 (ENSPTRG00000052299) #11 RAPSN (ENSPTRG00000003567) #12 PSMC3 (ENSPTRG00000003565) #13 SLC39A13 (ENSPTRG00000003564) #14 SPI1 (ENSPTRG00000003563) #15 MYBPC3 (ENSPTRG00000003562) #16 MADD (ENSPTRG00000003561) #17 NR1H3 (ENSPTRG00000003560) #18 ACP2 (ENSPTRG00000003559) #19 DDB2 (ENSPTRG00000003558) #20 ENSPTRG00000045675 PACSIN3 (ENSPTRG00000003557) #21 ARFGAP2 (ENSPTRG00000003556) #22 CSTPP1 (ENSPTRG00000003555) #23 LRP4 (ENSPTRG00000003554) #24 CKAP5 (ENSPTRG00000003553) #25 F2 (ENSPTRG00000003552) #26 ZNF408 (ENSPTRG00000003551) #27 ARHGAP1 (ENSPTRG00000003550) #28 ATG13 (ENSPTRG00000003549) #30 HARBI1 (ENSPTRG00000003548) #31 ENSPTRG00000043648 AMBRA1 (ENSPTRG00000003546) #32 CHRM4 (ENSPTRG00000038696) #33 MDK (ENSPTRG00000047115) #34 DGKZ (ENSPTRG00000003545) #36 CREB3L1 (ENSPTRG00000003543) #37 PHF21A (ENSPTRG00000003542) Bonobo MODERN SPECIES 2 NDUFS3 (ENSPPAG00000031162) #8 KBTBD4 (ENSPPAG00000031866) #9 PTPMT1 (ENSPPAG00000040774) #10 CELF1 (ENSPPAG00000033870) #11 RAPSN (ENSPPAG00000042512) #12 PSMC3 (ENSPPAG00000042401) #13 SLC39A13 (ENSPPAG00000042717) #14 SPI1 (ENSPPAG00000036814) #15 MYBPC3 (ENSPPAG00000030985) #16 MADD (ENSPPAG00000043339) #17 NR1H3 (ENSPPAG00000039033) #18 ACP2 (ENSPPAG00000042373) #19 DDB2 (ENSPPAG00000000958) #20 ENSPPAG00000021284 PACSIN3 (ENSPPAG00000040614) #21 ARFGAP2 (ENSPPAG00000030940) #22 CSTPP1 (ENSPPAG00000040870) #23 LRP4 (ENSPPAG00000043379) #24 CKAP5 (ENSPPAG00000030676) #25 F2 (ENSPPAG00000041509) #26 ZNF408 (ENSPPAG00000034993) #27 ARHGAP1 (ENSPPAG00000027953) #28 ATG13 (ENSPPAG00000042268) #30 HARBI1 (ENSPPAG00000035636) #31 AMBRA1 (ENSPPAG00000034195) #32 CHRM4 (ENSPPAG00000025475) #33 MDK (ENSPPAG00000023561) #34 DGKZ (ENSPPAG00000038574) #36 CREB3L1 (ENSPPAG00000029634) #37 PHF21A (ENSPPAG00000040226) LARGE2 (ENSPPAG00000037963) Human MODERN SPECIES 2 FAM180B (ENSG00000196666) KBTBD4 (ENSG00000123444) #9 PTPMT1 (ENSG00000110536) #10 NDUFS3 (ENSG00000213619) #8 CELF1 (ENSG00000149187) #11 RAPSN (ENSG00000165917) #12 PSMC3 (ENSG00000165916) #13 SLC39A13 (ENSG00000165915) #14 SPI1 (ENSG00000066336) #15 MYBPC3 (ENSG00000134571) #16 MADD (ENSG00000110514) #17 NR1H3 (ENSG00000025434) #18 ACP2 (ENSG00000134575) #19 DDB2 (ENSG00000134574) #20 PACSIN3 (ENSG00000165912) #21 ARFGAP2 (ENSG00000149182) #22 CSTPP1 (ENSG00000149179) #23 LRP4 (ENSG00000134569) #24 CKAP5 (ENSG00000175216) #25 F2 (ENSG00000180210) #26 ZNF408 (ENSG00000175213) #27 ARHGAP1 (ENSG00000175220) #28 ATG13 (ENSG00000175224) #30 HARBI1 (ENSG00000180423) #31 AMBRA1 (ENSG00000110497) #32 CHRM4 (ENSG00000180720) #33 MDK (ENSG00000110492) #34 DGKZ (ENSG00000149091) #36 CREB3L1 (ENSG00000157613) #37 PHF21A (ENSG00000135365) LARGE2 (ENSG00000165905) Gorilla MODERN SPECIES 2 FAM180B (ENSGGOG00000014401) NDUFS3 (ENSGGOG00000014393) #8 KBTBD4 (ENSGGOG00000013959) #9 PTPMT1 (ENSGGOG00000013954) #10 CELF1 (ENSGGOG00000004106) #11 RAPSN (ENSGGOG00000007325) #12 PSMC3 (ENSGGOG00000016530) #13 SLC39A13 (ENSGGOG00000016524) #14 SPI1 (ENSGGOG00000006485) #15 MYBPC3 (ENSGGOG00000006471) #16 MADD (ENSGGOG00000008588) #17 NR1H3 (ENSGGOG00000008583) #18 ACP2 (ENSGGOG00000008576) #19 DDB2 (ENSGGOG00000008569) #20 PACSIN3 (ENSGGOG00000008566) #21 ARFGAP2 (ENSGGOG00000008555) #22 CSTPP1 (ENSGGOG00000008547) #23 LRP4 (ENSGGOG00000001024) #24 CKAP5 (ENSGGOG00000006980) #25 F2 (ENSGGOG00000006967) #26 ZNF408 (ENSGGOG00000010152) #27 ARHGAP1 (ENSGGOG00000005697) #28 ATG13 (ENSGGOG00000005689) #30 HARBI1 (ENSGGOG00000004410) #31 AMBRA1 (ENSGGOG00000011880) #32 CHRM4 (ENSGGOG00000026871) #33 MDK (ENSGGOG00000011872) #34 DGKZ (ENSGGOG00000011849) #36 CREB3L1 (ENSGGOG00000015181) #37 PHF21A (ENSGGOG00000002304) LARGE2 (ENSGGOG00000002302) Orangutan MODERN SPECIES 2 FAM180B (ENSPPYG00000040243) NDUFS3 (ENSPPYG00000003299) #8 KBTBD4 (ENSPPYG00000003300) #9 PTPMT1 (ENSPPYG00000003301) #10 CELF1 (ENSPPYG00000003302) #11 RAPSN (ENSPPYG00000003303) #12 PSMC3 (ENSPPYG00000003304) #13 SLC39A13 (ENSPPYG00000003305) #14 SPI1 (ENSPPYG00000003306) #15 MYBPC3 (ENSPPYG00000003307) #16 MADD (ENSPPYG00000003308) #17 NR1H3 (ENSPPYG00000003309) #18 ACP2 (ENSPPYG00000003310) #19 DDB2 (ENSPPYG00000003311) #20 PACSIN3 (ENSPPYG00000003312) #21 ARFGAP2 (ENSPPYG00000003313) #22 CSTPP1 (ENSPPYG00000003314) #23 LRP4 (ENSPPYG00000003315) #24 CKAP5 (ENSPPYG00000003316) #25 F2 (ENSPPYG00000003317) #26 ZNF408 (ENSPPYG00000003318) #27 ARHGAP1 (ENSPPYG00000003319) #28 ATG13 (ENSPPYG00000003320) #30 HARBI1 (ENSPPYG00000003321) #31 AMBRA1 (ENSPPYG00000003322) #32 CHRM4 (ENSPPYG00000029365) #33 ENSPPYG00000038515 #34 DGKZ (ENSPPYG00000003323) #36 CREB3L1 (ENSPPYG00000003324) #37 PHF21A (ENSPPYG00000003325) LARGE2 (ENSPPYG00000003326) Gibbon MODERN SPECIES 5 NDUFS3 (ENSNLEG00000028559) #8 KBTBD4 (ENSNLEG00000014672) #9 PTPMT1 (ENSNLEG00000033815) #10 ENSNLEG00000033020 CELF1 (ENSNLEG00000014638) #11 RAPSN (ENSNLEG00000014627) #12 PSMC3 (ENSNLEG00000014572) #13 ENSNLEG00000014565 #14 SPI1 (ENSNLEG00000014555) #15 ENSNLEG00000014525 #16 MADD (ENSNLEG00000014491) #17 NR1H3 (ENSNLEG00000014458) #18 ACP2 (ENSNLEG00000014425) #19 DDB2 (ENSNLEG00000014385) #20 PACSIN3 (ENSNLEG00000014344) #21 ARFGAP2 (ENSNLEG00000014290) #22 CSTPP1 (ENSNLEG00000014283) #23 LRP4 (ENSNLEG00000014206) #24 CKAP5 (ENSNLEG00000014160) #25 F2 (ENSNLEG00000014150) #26 ZNF408 (ENSNLEG00000014132) #27 ARHGAP1 (ENSNLEG00000014095) #28 ATG13 (ENSNLEG00000014030) #30 HARBI1 (ENSNLEG00000014025) #31 ENSNLEG00000030310 AMBRA1 (ENSNLEG00000014020) #32 ENSNLEG00000014019 DGKZ (ENSNLEG00000014014) #36 ENSNLEG00000014012 #37 PHF21A (ENSNLEG00000013978) LARGE2 (ENSNLEG00000013954) Cercopithecidae ANCESTRAL SPECIES ENSGT00940000154479.a ENSGT00390000017480 #8 ENSGT00940000158775 #9 ENSGT00390000014065 #10 ENSGT00940000158970 #11 ENSGT00390000016785 #12 ENSGT01020000230346.E.s.b.a #13 ENSGT00940000157349 #14 ENSGT00940000159754 #15 ENSGT00940000157698.b #16 ENSGT00940000156718 #17 ENSGT00940000159068 #18 ENSGT00940000158446 #19 ENSGT00510000047881 #20 ENSGT00950000182973.b.a #21 ENSGT00940000155568 #22 ENSGT00390000012935 #23 ENSGT00940000158287 #24 ENSGT00390000014757 #25 ENSGT00940000154234.b #26 ENSGT00930000151062 #27 ENSGT00940000160630 #28 ENSGT00390000007055 #30 ENSGT00940000154348.c.b.a #31 ENSGT00910000148141 ENSGT00390000016223 #32 ENSGT00940000160394.a #33 ENSGT00390000007640.b.l #34 ENSGT00940000156152 #36 ENSGT00940000159848 #37 ENSGT00940000156124 Cercopithecinae ANCESTRAL SPECIES 3 ENSGT00940000154479.a ENSGT00390000017480 #8 ENSGT00940000158775 #9 ENSGT00390000014065 #10 ENSGT00940000158970 #11 ENSGT00390000016785 #12 ENSGT01020000230346.E.s.b.a #13 ENSGT00940000157349 #14 ENSGT00940000159754 #15 ENSGT00940000157698.b #16 ENSGT00940000156718 #17 ENSGT00940000159068 #18 ENSGT00940000158446 #19 ENSGT00510000047881 #20 ENSGT00950000182973.b.a #21 ENSGT00940000155568 #22 ENSGT00390000012935 #23 ENSGT00940000158287 #24 ENSGT00390000014757 #25 ENSGT00940000154234.b #26 ENSGT00930000151062 #27 ENSGT00940000160630 #28 ENSGT00390000007055 #30 ENSGT00940000154348.c.b.a #31 ENSGT00910000148141 ENSGT00390000016223 #32 ENSGT00940000160394.a #33 ENSGT00390000007640.b.l #34 ENSGT00940000156152 #36 ENSGT00940000159848 #37 ENSGT00940000156124 Vervet Monkey MODERN SPECIES FAM180B (ENSCSAG00000005805) NDUFS3 (ENSCSAG00000005802) #8 KBTBD4 (ENSCSAG00000005797) #9 PTPMT1 (ENSCSAG00000005789) #10 CELF1 (ENSCSAG00000005786) #11 RAPSN (ENSCSAG00000005780) #12 PSMC3 (ENSCSAG00000005779) #13 SLC39A13 (ENSCSAG00000005760) #14 SPI1 (ENSCSAG00000005757) #15 MYBPC3 (ENSCSAG00000005746) #16 MADD (ENSCSAG00000005705) #17 NR1H3 (ENSCSAG00000005699) #18 ACP2 (ENSCSAG00000005697) #19 DDB2 (ENSCSAG00000005694) #20 PACSIN3 (ENSCSAG00000005693) #21 ARFGAP2 (ENSCSAG00000005691) #22 CSTPP1 (ENSCSAG00000005689) #23 ENSCSAG00000019209 LRP4 (ENSCSAG00000005688) #24 CKAP5 (ENSCSAG00000005686) #25 F2 (ENSCSAG00000005684) #26 ZNF408 (ENSCSAG00000005681) #27 ARHGAP1 (ENSCSAG00000005680) #28 ATG13 (ENSCSAG00000005678) #30 HARBI1 (ENSCSAG00000005676) #31 AMBRA1 (ENSCSAG00000005675) #32 CHRM4 (ENSCSAG00000019210) #33 ENSCSAG00000005668 #34 DGKZ (ENSCSAG00000005662) #36 CREB3L1 (ENSCSAG00000005658) #37 PHF21A (ENSCSAG00000005653) Cercopithecinae_a ANCESTRAL SPECIES 2 ENSGT00940000154479.a ENSGT00390000017480 #8 ENSGT00940000158775 #9 ENSGT00390000014065 #10 ENSGT00940000158970 #11 ENSGT00390000016785 #12 ENSGT01020000230346.E.s.b.a #13 ENSGT00940000157349 #14 ENSGT00940000159754 #15 ENSGT00940000157698.b #16 ENSGT00940000156718 #17 ENSGT00940000159068 #18 ENSGT00940000158446 #19 ENSGT00510000047881 #20 ENSGT00950000182973.b.a #21 ENSGT00940000155568 #22 ENSGT00390000012935 #23 ENSGT00940000158287 #24 ENSGT00390000014757 #25 ENSGT00940000154234.b #26 ENSGT00930000151062 #27 ENSGT00940000160630 #28 ENSGT00390000007055 #30 ENSGT00940000154348.c.b.a #31 ENSGT00910000148141 ENSGT00390000016223 #32 ENSGT00940000160394.a #33 ENSGT00390000007640.b.l #34 ENSGT00940000156152 #36 ENSGT00940000159848 #37 ENSGT00940000156124 Macaca ANCESTRAL SPECIES 2 ENSGT00940000154479.a ENSGT00390000017480 #8 ENSGT00940000158775 #9 ENSGT00390000014065 #10 ENSGT00940000158970 #11 ENSGT00390000016785 #12 ENSGT01020000230346.E.s.b.a #13 ENSGT00940000157349 #14 ENSGT00940000159754 #15 ENSGT00940000157698.b #16 ENSGT00940000156718 #17 ENSGT00940000159068 #18 ENSGT00940000158446 #19 ENSGT00510000047881 #20 ENSGT00950000182973.b.a #21 ENSGT00940000155568 #22 ENSGT00390000012935 #23 ENSGT00940000158287 #24 ENSGT00390000014757 #25 ENSGT00940000154234.b #26 ENSGT00930000151062 #27 ENSGT00940000160630 #28 ENSGT00390000007055 #30 ENSGT00940000154348.c.b.a #31 ENSGT00390000016223 #32 ENSGT00940000160394.a #33 ENSGT00390000007640.b.l #34 ENSGT00940000156152 #36 ENSGT00940000159848 #37 ENSGT00940000156124 ENSGT00940000158758 Pig-tailed macaque MODERN SPECIES 485 FAM180B (ENSMNEG00000033276) NDUFS3 (ENSMNEG00000030290) #8 KBTBD4 (ENSMNEG00000036394) #9 PTPMT1 (ENSMNEG00000034588) #10 CELF1 (ENSMNEG00000022558) #11 RAPSN (ENSMNEG00000029367) #12 ENSMNEG00000044564 #13 SLC39A13 (ENSMNEG00000040430) #14 SPI1 (ENSMNEG00000027877) #15 MYBPC3 (ENSMNEG00000029406) #16 MADD (ENSMNEG00000030300) #17 NR1H3 (ENSMNEG00000032200) #18 ACP2 (ENSMNEG00000031619) #19 DDB2 (ENSMNEG00000029423) #20 PACSIN3 (ENSMNEG00000041496) #21 ARFGAP2 (ENSMNEG00000042175) #22 CSTPP1 (ENSMNEG00000043208) #23 LRP4 (ENSMNEG00000039196) #24 CKAP5 (ENSMNEG00000045449) #25 F2 (ENSMNEG00000040864) #26 ZNF408 (ENSMNEG00000040215) #27 ARHGAP1 (ENSMNEG00000044079) #28 ATG13 (ENSMNEG00000028546) #30 HARBI1 (ENSMNEG00000039470) #31 AMBRA1 (ENSMNEG00000041218) #32 CHRM4 (ENSMNEG00000019466) #33 MDK (ENSMNEG00000006686) #34 DGKZ (ENSMNEG00000042881) #36 CREB3L1 (ENSMNEG00000041356) #37 PHF21A (ENSMNEG00000041377) LARGE2 (ENSMNEG00000040995) Macaca_a ANCESTRAL SPECIES 3 ENSGT00940000154479.a ENSGT00390000017480 #8 ENSGT00940000158775 #9 ENSGT00390000014065 #10 ENSGT00940000158970 #11 ENSGT00390000016785 #12 ENSGT01020000230346.E.s.b.a #13 ENSGT00940000157349 #14 ENSGT00940000159754 #15 ENSGT00940000157698.b #16 ENSGT00940000156718 #17 ENSGT00940000159068 #18 ENSGT00940000158446 #19 ENSGT00510000047881 #20 ENSGT00950000182973.b.a #21 ENSGT00940000155568 #22 ENSGT00390000012935 #23 ENSGT00940000158287 #24 ENSGT00390000014757 #25 ENSGT00940000154234.b #26 ENSGT00930000151062 #27 ENSGT00940000160630 #28 ENSGT00390000007055 #30 ENSGT00940000154348.c.b.a #31 ENSGT00390000016223 #32 ENSGT00940000160394.a #33 ENSGT00390000007640.b.l #34 ENSGT00940000156152 #36 ENSGT00940000159848 #37 ENSGT00940000161627.a.a.a.a.b.a.a.a.a.b.b.a.a.b.b.a ENSGT00940000156124 Rhesus MODERN SPECIES 5 FAM180B (ENSMMUG00000053860) NDUFS3 (ENSMMUG00000045281) #8 PTPMT1 (ENSMMUG00000004286) #10 KBTBD4 (ENSMMUG00000004289) #9 CELF1 (ENSMMUG00000011657) #11 ENSMMUG00000064417 RAPSN (ENSMMUG00000009498) #12 PSMC3 (ENSMMUG00000015611) #13 SLC39A13 (ENSMMUG00000015607) #14 SPI1 (ENSMMUG00000015606) #15 MYBPC3 (ENSMMUG00000015604) #16 MADD (ENSMMUG00000015602) #17 NR1H3 (ENSMMUG00000015598) #18 ACP2 (ENSMMUG00000015597) #19 PACSIN3 (ENSMMUG00000006359) #21 ARFGAP2 (ENSMMUG00000006357) #22 CSTPP1 (ENSMMUG00000006355) #23 LRP4 (ENSMMUG00000013100) #24 CKAP5 (ENSMMUG00000003631) #25 F2 (ENSMMUG00000019674) #26 ZNF408 (ENSMMUG00000063711) #27 ARHGAP1 (ENSMMUG00000007831) #28 ATG13 (ENSMMUG00000019672) #30 HARBI1 (ENSMMUG00000059160) #31 AMBRA1 (ENSMMUG00000011526) #32 CHRM4 (ENSMMUG00000039412) #33 MDK (ENSMMUG00000038138) #34 DGKZ (ENSMMUG00000021446) #36 CREB3L1 (ENSMMUG00000018571) #37 ENSMMUG00000053388 PHF21A (ENSMMUG00000002617) Crab-eating macaque MODERN SPECIES 5 NDUFS3 (ENSMFAG00000031067) #8 PTPMT1 (ENSMFAG00000042995) #10 KBTBD4 (ENSMFAG00000032928) #9 CELF1 (ENSMFAG00000003505) #11 RAPSN (ENSMFAG00000037957) #12 PSMC3 (ENSMFAG00000003854) #13 SLC39A13 (ENSMFAG00000003412) #14 ENSMFAG00000050805 MYBPC3 (ENSMFAG00000041621) #16 MADD (ENSMFAG00000039619) #17 NR1H3 (ENSMFAG00000002014) #18 ACP2 (ENSMFAG00000000393) #19 DDB2 (ENSMFAG00000031723) #20 ENSMFAG00000057633 PACSIN3 (ENSMFAG00000039377) #21 ARFGAP2 (ENSMFAG00000030043) #22 CSTPP1 (ENSMFAG00000038437) #23 LRP4 (ENSMFAG00000003482) #24 CKAP5 (ENSMFAG00000001378) #25 F2 (ENSMFAG00000031977) #26 ZNF408 (ENSMFAG00000036575) #27 ARHGAP1 (ENSMFAG00000036912) #28 ATG13 (ENSMFAG00000038288) #30 HARBI1 (ENSMFAG00000002487) #31 ENSMFAG00000002000 #32 CHRM4 (ENSMFAG00000021204) #33 MDK (ENSMFAG00000000818) #34 DGKZ (ENSMFAG00000032211) #36 CREB3L1 (ENSMFAG00000031047) #37 ENSMFAG00000058269 PHF21A (ENSMFAG00000043688) Cercopithecinae_b ANCESTRAL SPECIES 27 ENSGT00940000154479.a ENSGT00390000017480 #8 ENSGT00940000158775 #9 ENSGT00390000014065 #10 ENSGT00940000158970 #11 ENSGT00390000016785 #12 ENSGT01020000230346.E.s.b.a #13 ENSGT00940000157349 #14 ENSGT00940000159754 #15 ENSGT00940000157698.b #16 ENSGT00940000156718.m #17 ENSGT00940000159068 #18 ENSGT00940000158446 #19 ENSGT00510000047881 #20 ENSGT00950000182973.b.a #21 ENSGT00940000155568 #22 ENSGT00390000012935 #23 ENSGT00940000158287 #24 ENSGT00390000014757 #25 ENSGT00940000154234.b #26 ENSGT00930000151062 #27 ENSGT00940000160630 #28 ENSGT00390000007055 #30 ENSGT00940000154348.c.b.a #31 ENSGT00910000148141 ENSGT00390000016223 #32 ENSGT00940000160394.a #33 ENSGT00390000007640.b.l #34 ENSGT00940000156152 #36 ENSGT00940000159848 #37 ENSGT00940000156124 Cercopithecinae_d ANCESTRAL SPECIES 61 ENSGT00940000154479.a ENSGT00390000017480 #8 ENSGT00940000158775 #9 ENSGT00390000014065 #10 ENSGT00940000158970 #11 ENSGT00390000016785 #12 ENSGT01020000230346.E.s.b.a #13 ENSGT00940000157349 #14 ENSGT00940000159754 #15 ENSGT00940000157698.b #16 ENSGT00940000156718.m #17 ENSGT00940000159068 #18 ENSGT00940000158446 #19 ENSGT00510000047881 #20 ENSGT00950000182973.b.a #21 ENSGT00940000155568 #22 ENSGT00390000012935 #23 ENSGT00940000158287 #24 ENSGT00390000014757 #25 ENSGT00940000154234.b #26 ENSGT00930000151062 #27 ENSGT00910000147892 ENSGT00940000160630 #28 ENSGT00390000007055 #30 ENSGT00940000154348.c.b.a #31 ENSGT00910000148141 ENSGT00390000016223 #32 ENSGT00940000160394.a #33 ENSGT00390000007640.b.l #34 ENSGT00940000156152 #36 ENSGT00940000159848 #37 Drill MODERN SPECIES 1384 FAM180B (ENSMLEG00000030769) NDUFS3 (ENSMLEG00000042396) #8 KBTBD4 (ENSMLEG00000028879) #9 PTPMT1 (ENSMLEG00000020293) #10 CELF1 (ENSMLEG00000040834) #11 RAPSN (ENSMLEG00000037859) #12 ENSMLEG00000033056 #13 SLC39A13 (ENSMLEG00000043749) #14 SPI1 (ENSMLEG00000004290) #15 MYBPC3 (ENSMLEG00000028682) #16 MADD (ENSMLEG00000032767) #17 NR1H3 (ENSMLEG00000044270) #18 ACP2 (ENSMLEG00000042774) #19 DDB2 (ENSMLEG00000032535) #20 PACSIN3 (ENSMLEG00000043145) #21 ARFGAP2 (ENSMLEG00000043821) #22 ENSMLEG00000028689 CSTPP1 (ENSMLEG00000040490) #23 LRP4 (ENSMLEG00000043395) #24 CKAP5 (ENSMLEG00000034738) #25 F2 (ENSMLEG00000043758) #26 ZNF408 (ENSMLEG00000044029) #27 ENSMLEG00000042128 ARHGAP1 (ENSMLEG00000031958) #28 ATG13 (ENSMLEG00000027900) #30 HARBI1 (ENSMLEG00000026358) #31 ENSMLEG00000027431 AMBRA1 (ENSMLEG00000040418) #32 CHRM4 (ENSMLEG00000007804) #33 ENSMLEG00000036687 #34 DGKZ (ENSMLEG00000026419) #36 Sooty mangabey MODERN SPECIES 193 FAM180B (ENSCATG00000042552) NDUFS3 (ENSCATG00000029573) #8 KBTBD4 (ENSCATG00000032867) #9 PTPMT1 (ENSCATG00000033306) #10 CELF1 (ENSCATG00000040143) #11 RAPSN (ENSCATG00000043406) #12 ENSCATG00000020806 #13 SLC39A13 (ENSCATG00000042480) #14 SPI1 (ENSCATG00000041395) #15 MYBPC3 (ENSCATG00000033529) #16 MADD (ENSCATG00000019656) #17 NR1H3 (ENSCATG00000031838) #18 ACP2 (ENSCATG00000039992) #19 DDB2 (ENSCATG00000037043) #20 PACSIN3 (ENSCATG00000044836) #21 ARFGAP2 (ENSCATG00000032091) #22 CSTPP1 (ENSCATG00000034976) #23 LRP4 (ENSCATG00000034844) #24 CKAP5 (ENSCATG00000037509) #25 F2 (ENSCATG00000038182) #26 ZNF408 (ENSCATG00000035814) #27 ENSCATG00000034262 ARHGAP1 (ENSCATG00000043789) #28 ATG13 (ENSCATG00000038547) #30 HARBI1 (ENSCATG00000043376) #31 AMBRA1 (ENSCATG00000037285) #32 CHRM4 (ENSCATG00000003262) #33 MDK (ENSCATG00000042264) #34 DGKZ (ENSCATG00000037163) #36 ENSCATG00000005272 CREB3L1 (ENSCATG00000036131) #37 Olive baboon MODERN SPECIES 3 FAM180B (ENSPANG00000000112) NDUFS3 (ENSPANG00000001634) #8 KBTBD4 (ENSPANG00000017205) #9 ENSPANG00000007187 CELF1 (ENSPANG00000021676) #11 RAPSN (ENSPANG00000004124) #12 PSMC3 (ENSPANG00000017381) #13 SLC39A13 (ENSPANG00000013478) #14 SPI1 (ENSPANG00000004468) #15 MYBPC3 (ENSPANG00000016552) #16 DDB2 (ENSPANG00000006542) #20 ACP2 (ENSPANG00000001892) #19 NR1H3 (ENSPANG00000016658) #18 ENSPANG00000018411 #17 PACSIN3 (ENSPANG00000007979) #21 ARFGAP2 (ENSPANG00000016976) #22 CSTPP1 (ENSPANG00000001891) #23 ENSPANG00000030649 ENSPANG00000023598 #24 HARBI1 (ENSPANG00000023007) #31 ATG13 (ENSPANG00000006613) #30 ARHGAP1 (ENSPANG00000012059) #28 ZNF408 (ENSPANG00000032617) #27 F2 (ENSPANG00000016657) #26 CKAP5 (ENSPANG00000013230) #25 AMBRA1 (ENSPANG00000017260) #32 MDK (ENSPANG00000020889) #34 DGKZ (ENSPANG00000025617) #36 CREB3L1 (ENSPANG00000015384) #37 PHF21A (ENSPANG00000016889) LARGE2 (ENSPANG00000016656) Rhinopithecus ANCESTRAL SPECIES 64 ENSGT00940000154479.a ENSGT00390000017480 #8 ENSGT00940000158775 #9 ENSGT00390000014065 #10 ENSGT00940000158970 #11 ENSGT00390000016785 #12 ENSGT01020000230346.E.s.b.a #13 ENSGT00940000157349 #14 ENSGT00940000159754 #15 ENSGT00940000157698.b #16 ENSGT00940000156718 #17 ENSGT00940000159068 #18 ENSGT00940000158446 #19 ENSGT00510000047881 #20 ENSGT00950000182973.b.a #21 ENSGT00940000155568 #22 ENSGT00390000012935 #23 ENSGT00940000158287 #24 ENSGT00390000014757 #25 ENSGT00940000154234.b #26 ENSGT00930000151062 #27 ENSGT00940000160630 #28 ENSGT00390000007055 #30 ENSGT00940000154348.c.b.a #31 ENSGT00390000016223.b #32 ENSGT00940000160394.a #33 ENSGT00390000007640.b.l #34 ENSGT00940000156152 #36 ENSGT00940000159848 #37 ENSGT00940000156124 ENSGT00940000158758 Golden snub-nosed monkey MODERN SPECIES 1568 FAM180B (ENSRROG00000041406) NDUFS3 (ENSRROG00000031411) #8 KBTBD4 (ENSRROG00000043819) #9 PTPMT1 (ENSRROG00000030092) #10 CELF1 (ENSRROG00000032588) #11 RAPSN (ENSRROG00000040174) #12 ENSRROG00000041915 #13 SLC39A13 (ENSRROG00000038485) #14 SPI1 (ENSRROG00000045565) #15 MYBPC3 (ENSRROG00000043489) #16 MADD (ENSRROG00000041291) #17 NR1H3 (ENSRROG00000045605) #18 ACP2 (ENSRROG00000028745) #19 DDB2 (ENSRROG00000045383) #20 PACSIN3 (ENSRROG00000041480) #21 ARFGAP2 (ENSRROG00000030954) #22 CSTPP1 (ENSRROG00000045631) #23 LRP4 (ENSRROG00000039736) #24 CKAP5 (ENSRROG00000039765) #25 F2 (ENSRROG00000038131) #26 ZNF408 (ENSRROG00000033904) #27 ARHGAP1 (ENSRROG00000037876) #28 ATG13 (ENSRROG00000031087) #30 HARBI1 (ENSRROG00000031237) #31 AMBRA1 (ENSRROG00000034630) #32 CHRM4 (ENSRROG00000024047) #33 ENSRROG00000040007 #34 DGKZ (ENSRROG00000044186) #36 CREB3L1 (ENSRROG00000041731) #37 PHF21A (ENSRROG00000034376) LARGE2 (ENSRROG00000030434) Black snub-nosed monkey MODERN SPECIES 2256 MYBPC3 (ENSRBIG00000040693) #16 MADD (ENSRBIG00000041171) #17 NR1H3 (ENSRBIG00000002426) #18 ACP2 (ENSRBIG00000003979) #19 DDB2 (ENSRBIG00000036127) #20 PACSIN3 (ENSRBIG00000027822) #21 ARFGAP2 (ENSRBIG00000041344) #22 CSTPP1 (ENSRBIG00000040070) #23 ENSRBIG00000043694 LRP4 (ENSRBIG00000024580) #24 CKAP5 (ENSRBIG00000044614) #25 F2 (ENSRBIG00000033898) #26 ZNF408 (ENSRBIG00000010662) #27 ARHGAP1 (ENSRBIG00000029818) #28 ENSRBIG00000044190 ATG13 (ENSRBIG00000044753) #30 HARBI1 (ENSRBIG00000010258) #31 ENSRBIG00000031731 #32 RUBCNL (ENSRBIG00000034790) LRCH1 (ENSRBIG00000037630) ENSRBIG00000044678 HTR2A (ENSRBIG00000038684) Platyrrhini DUPLICATION Platyrrhini ANCESTRAL SPECIES 3 ENSGT00940000154479.a ENSGT00390000017480 #8 ENSGT00940000158775 #9 ENSGT00390000014065 #10 ENSGT00940000158970 #11 ENSGT00390000016785 #12 ENSGT01020000230346.E.s.a #13 ENSGT00940000157349 #14 ENSGT00940000159754 #15 ENSGT00940000157698.b #16 ENSGT00940000156718 #17 ENSGT00940000159068 #18 ENSGT00940000158446 #19 ENSGT00510000047881 #20 ENSGT00950000182973.b.a #21 ENSGT00940000155568.s #22 ENSGT00390000012935 #23 ENSGT00940000158287 #24 ENSGT00390000014757 #25 ENSGT00940000154234.b #26 ENSGT00930000151062 #27 ENSGT00940000160630 #28 ENSGT00390000007055 #30 ENSGT00940000154348.c.b.a #31 ENSGT00390000016223 #32 ENSGT00940000160394.a #33 ENSGT00390000007640.b.n.b #34 ENSGT00940000156152 #36 ENSGT00940000159848 #37 ENSGT00940000156124 ENSGT00940000158758 Cebidae ANCESTRAL SPECIES ENSGT00940000154479.a ENSGT00390000017480 #8 ENSGT00940000158775 #9 ENSGT00390000014065 #10 ENSGT00940000158970 #11 ENSGT00390000016785 #12 ENSGT01020000230346.E.s.a #13 ENSGT00940000157349 #14 ENSGT00940000159754 #15 ENSGT00940000157698.b #16 ENSGT00940000156718 #17 ENSGT00940000159068 #18 ENSGT00940000158446 #19 ENSGT00510000047881 #20 ENSGT00950000182973.b.a #21 ENSGT00940000155568.s #22 ENSGT00390000012935 #23 ENSGT00940000158287 #24 ENSGT00390000014757 #25 ENSGT00940000154234.b #26 ENSGT00930000151062 #27 ENSGT00940000160630 #28 ENSGT00390000007055 #30 ENSGT00940000154348.c.b.a #31 ENSGT00390000016223 #32 ENSGT00940000160394.a #33 ENSGT00390000007640.b.n.b #34 ENSGT00940000156152 #36 ENSGT00940000159848 #37 ENSGT00940000156124 ENSGT00940000158758 Cebidae_a DUPLICATION Cebidae_a ANCESTRAL SPECIES 10 ENSGT00940000154479.a ENSGT00390000017480 #8 ENSGT00940000158775 #9 ENSGT00390000014065 #10 ENSGT00940000158970 #11 ENSGT00390000016785 #12 ENSGT01020000230346.E.s.a #13 ENSGT00940000157349 #14 ENSGT00940000159754 #15 ENSGT00940000157698.b #16 ENSGT00940000156718 #17 ENSGT00940000159068 #18 ENSGT00940000158446 #19 ENSGT00510000047881 #20 ENSGT00950000182973.b.a #21 ENSGT00940000155568.s.a #22 ENSGT00390000012935 #23 ENSGT00940000158287 #24 ENSGT00390000014757 #25 ENSGT00940000154234.b #26 ENSGT00930000151062 #27 ENSGT00940000160630 #28 ENSGT00390000007055 #30 ENSGT00940000154348.c.b.a #31 ENSGT00390000016223 #32 ENSGT00940000160394.a #33 ENSGT00390000007640.b.n.b #34 ENSGT00940000156152 #36 ENSGT00940000159848 #37 ENSGT00940000156124 ENSGT00940000158758 Capuchin MODERN SPECIES 58 FAM180B (ENSCCAG00000028252) NDUFS3 (ENSCCAG00000031365) #8 KBTBD4 (ENSCCAG00000020004) #9 PTPMT1 (ENSCCAG00000034346) #10 CELF1 (ENSCCAG00000033487) #11 RAPSN (ENSCCAG00000022014) #12 PSMC3 (ENSCCAG00000025080) #13 SLC39A13 (ENSCCAG00000034535) #14 SPI1 (ENSCCAG00000022473) #15 MYBPC3 (ENSCCAG00000036859) #16 MADD (ENSCCAG00000036617) #17 NR1H3 (ENSCCAG00000024854) #18 ACP2 (ENSCCAG00000022333) #19 DDB2 (ENSCCAG00000031012) #20 PACSIN3 (ENSCCAG00000031265) #21 ENSCCAG00000036464 #22 C11orf49 (ENSCCAG00000028967) #23 LRP4 (ENSCCAG00000034888) #24 ENSCCAG00000033202 CKAP5 (ENSCCAG00000029859) #25 PGAM4 (ENSCCAG00000037081) F2 (ENSCCAG00000028699) #26 ZNF408 (ENSCCAG00000029472) #27 ARHGAP1 (ENSCCAG00000005865) #28 ATG13 (ENSCCAG00000033415) #30 HARBI1 (ENSCCAG00000033538) #31 AMBRA1 (ENSCCAG00000036631) #32 CHRM4 (ENSCCAG00000016622) #33 ENSCCAG00000030225 #34 DGKZ (ENSCCAG00000027153) #36 CREB3L1 (ENSCCAG00000036096) #37 Bolivian squirrel monkey MODERN SPECIES 42 FAM180B (ENSSBOG00000029352) ENSSBOG00000001386 #8 KBTBD4 (ENSSBOG00000030700) #9 ENSSBOG00000025269 CELF1 (ENSSBOG00000021912) #11 RAPSN (ENSSBOG00000022262) #12 ENSSBOG00000006227 #13 SLC39A13 (ENSSBOG00000010603) #14 SPI1 (ENSSBOG00000022091) #15 MYBPC3 (ENSSBOG00000030340) #16 MADD (ENSSBOG00000021915) #17 NR1H3 (ENSSBOG00000027982) #18 ACP2 (ENSSBOG00000033600) #19 DDB2 (ENSSBOG00000030867) #20 PACSIN3 (ENSSBOG00000033696) #21 ENSSBOG00000031368 #22 CSTPP1 (ENSSBOG00000033686) #23 LRP4 (ENSSBOG00000032261) #24 ENSSBOG00000032726 ENSSBOG00000028063 CKAP5 (ENSSBOG00000031735) #25 F2 (ENSSBOG00000020779) #26 ZNF408 (ENSSBOG00000033023) #27 ARHGAP1 (ENSSBOG00000032970) #28 ATG13 (ENSSBOG00000009657) #30 HARBI1 (ENSSBOG00000025915) #31 AMBRA1 (ENSSBOG00000021917) #32 CHRM4 (ENSSBOG00000015294) #33 ENSSBOG00000025813 DGKZ (ENSSBOG00000028666) #36 CREB3L1 (ENSSBOG00000026826) #37 Cebidae_a ANCESTRAL SPECIES 153 ENSGT00390000000537.e.a ENSGT00940000163284 ENSGT00940000163669 ENSGT00940000155568.s.b #22 ENSGT00950000183043.a.b.b.a.a.a.a.a.a Capuchin MODERN SPECIES 596 MFSD14B (ENSCCAG00000022369) ENSCCAG00000027887 ENSCCAG00000022471 ENSCCAG00000029462 ENSCCAG00000035687 ZNF484 (ENSCCAG00000018489) ENSCCAG00000028215 ENSCCAG00000033430 ENSCCAG00000018366 ZNF658 (ENSCCAG00000023430) ENSCCAG00000026021 #22 ENSCCAG00000025107 ENSCCAG00000022388 Bolivian squirrel monkey MODERN SPECIES 183 ENSSBOG00000019038 ZNF484 (ENSSBOG00000028893) ENSSBOG00000026738 ZNF658 (ENSSBOG00000024932) ENSSBOG00000031502 #22 ENSSBOG00000035504 ENSSBOG00000023397 ENSSBOG00000032397 ENSSBOG00000008205 FAM240B (ENSSBOG00000034487) CTSV (ENSSBOG00000033822) ENSSBOG00000031699 ZNF782 (ENSSBOG00000023730) ENSSBOG00000020207 ENSSBOG00000017777 CTSL (ENSSBOG00000026254) DAPK1 (ENSSBOG00000027113) ENSSBOG00000020099 ISCA1 (ENSSBOG00000021772) ENSSBOG00000026003 Marmoset MODERN SPECIES 2 FAM180B (ENSCJAG00000043701) NDUFS3 (ENSCJAG00000020194) #8 KBTBD4 (ENSCJAG00000020173) #9 PTPMT1 (ENSCJAG00000020163) #10 CELF1 (ENSCJAG00000020133) #11 RAPSN (ENSCJAG00000020129) #12 ENSCJAG00000020108 #13 SPI1 (ENSCJAG00000020100) #15 MYBPC3 (ENSCJAG00000020066) #16 MADD (ENSCJAG00000020045) #17 NR1H3 (ENSCJAG00000020019) #18 ACP2 (ENSCJAG00000020008) #19 SLC39A13 (ENSCJAG00000020101) #14 DDB2 (ENSCJAG00000020000) #20 PACSIN3 (ENSCJAG00000019993) #21 ENSCJAG00000019965 #22 CSTPP1 (ENSCJAG00000019962) #23 LRP4 (ENSCJAG00000019944) #24 CKAP5 (ENSCJAG00000019878) #25 F2 (ENSCJAG00000019864) #26 ZNF408 (ENSCJAG00000019859) #27 ARHGAP1 (ENSCJAG00000019849) #28 ATG13 (ENSCJAG00000019823) #30 HARBI1 (ENSCJAG00000046232) #31 AMBRA1 (ENSCJAG00000002155) #32 CHRM4 (ENSCJAG00000011861) #33 ENSCJAG00000011852 #34 DGKZ (ENSCJAG00000011773) #36 CREB3L1 (ENSCJAG00000011726) #37 ENSCJAG00000051468 PHF21A (ENSCJAG00000011670) Mas night monkey MODERN SPECIES 349 FAM180B (ENSANAG00000021375) NDUFS3 (ENSANAG00000030907) #8 KBTBD4 (ENSANAG00000029505) #9 ENSANAG00000033117 CELF1 (ENSANAG00000031770) #11 RAPSN (ENSANAG00000022248) #12 ENSANAG00000037076 #13 SLC39A13 (ENSANAG00000027448) #14 SPI1 (ENSANAG00000029485) #15 MYBPC3 (ENSANAG00000023289) #16 MADD (ENSANAG00000024603) #17 NR1H3 (ENSANAG00000037990) #18 ACP2 (ENSANAG00000032696) #19 DDB2 (ENSANAG00000036510) #20 PACSIN3 (ENSANAG00000030038) #21 ARFGAP2 (ENSANAG00000031850) #22 ENSANAG00000026796 CSTPP1 (ENSANAG00000037882) #23 LRP4 (ENSANAG00000038492) #24 ENSANAG00000038320 CKAP5 (ENSANAG00000031236) #25 F2 (ENSANAG00000036904) #26 ZNF408 (ENSANAG00000036294) #27 ARHGAP1 (ENSANAG00000038289) #28 ATG13 (ENSANAG00000036615) #30 HARBI1 (ENSANAG00000038532) #31 AMBRA1 (ENSANAG00000037577) #32 CHRM4 (ENSANAG00000007361) #33 ENSANAG00000030861 #34 DGKZ (ENSANAG00000023123) #36 CREB3L1 (ENSANAG00000023783) #37 Platyrrhini ANCESTRAL SPECIES ENSGT00940000155568.t #22 Cebidae ANCESTRAL SPECIES ENSGT00940000155568.t #22 Marmoset MODERN SPECIES ENSCJAG00000071937 ENSCJAG00000071822 ENSCJAG00000056067 ENSCJAG00000074792 IARS1 (ENSCJAG00000020465) NOL8 (ENSCJAG00000039875) ENSCJAG00000058939 OGN (ENSCJAG00000020486) OMD (ENSCJAG00000047888) ASPN (ENSCJAG00000020495) ECM2 (ENSCJAG00000020502) ENSCJAG00000083597 CENPP (ENSCJAG00000020482) BICD2 (ENSCJAG00000020519) FGD3 (ENSCJAG00000020520) ENSCJAG00000000423 #22 ENSCJAG00000069734 ZNF782 (ENSCJAG00000005372) ENSCJAG00000055940 ENSCJAG00000080940 HSD17B3 (ENSCJAG00000008899) ENSCJAG00000055424 ERCC6L2 (ENSCJAG00000043554) PTCH1 (ENSCJAG00000021318) FANCC (ENSCJAG00000021324) AOPEP (ENSCJAG00000021327) FBP1 (ENSCJAG00000041493) FBP2 (ENSCJAG00000021334) ENSCJAG00000075286 ENSCJAG00000076862 ENSCJAG00000067353 Tarsier MODERN SPECIES 4544 MADD (ENSTSYG00000001550) #17 NR1H3 (ENSTSYG00000001532) #18 ACP2 (ENSTSYG00000001510) #19 DDB2 (ENSTSYG00000001500) #20 PACSIN3 (ENSTSYG00000025849) #21 ARFGAP2 (ENSTSYG00000014155) #22 CUNH11orf49 (ENSTSYG00000014153) #23 ENSTSYG00000033400 Strepsirrhini ANCESTRAL SPECIES 6 ENSGT00940000154479.a ENSGT00390000017480 #8 ENSGT00940000158775 #9 ENSGT00390000014065 #10 ENSGT00940000158970 #11 ENSGT00390000016785 #12 ENSGT01020000230346.E #13 ENSGT00940000157349 #14 ENSGT00940000159754 #15 ENSGT00940000157698.b #16 ENSGT00940000156718 #17 ENSGT00940000159068 #18 ENSGT00940000158446 #19 ENSGT00510000047881 #20 ENSGT00950000182973.b.a #21 ENSGT00940000155568 #22 ENSGT00390000012935 #23 ENSGT00940000158287 #24 ENSGT00390000014757 #25 ENSGT00940000154234.b #26 ENSGT00930000151062 #27 ENSGT00940000160630 #28 ENSGT00390000007055 #30 ENSGT00940000154348.c.b.a #31 ENSGT00390000016223 #32 ENSGT00940000160394.a #33 ENSGT00390000007640.b #34 ENSGT00940000156152 #36 ENSGT00940000159848 #37 ENSGT00940000156124 ENSGT00940000158758 Bushbaby MODERN SPECIES 116 NDUFS3 (ENSOGAG00000011606) #8 ENSOGAG00000030764 KBTBD4 (ENSOGAG00000028799) #9 PTPMT1 (ENSOGAG00000031935) #10 CELF1 (ENSOGAG00000011600) #11 RAPSN (ENSOGAG00000027783) #12 ENSOGAG00000015289 #13 SLC39A13 (ENSOGAG00000012440) #14 SPI1 (ENSOGAG00000012435) #15 MYBPC3 (ENSOGAG00000012425) #16 MADD (ENSOGAG00000012414) #17 NR1H3 (ENSOGAG00000012410) #18 ACP2 (ENSOGAG00000025562) #19 DDB2 (ENSOGAG00000012408) #20 PACSIN3 (ENSOGAG00000012403) #21 ARFGAP2 (ENSOGAG00000012399) #22 ENSOGAG00000026518 CSTPP1 (ENSOGAG00000012396) #23 LRP4 (ENSOGAG00000011979) #24 CKAP5 (ENSOGAG00000004560) #25 F2 (ENSOGAG00000004555) #26 ZNF408 (ENSOGAG00000034080) #27 ARHGAP1 (ENSOGAG00000014288) #28 ATG13 (ENSOGAG00000004547) #30 HARBI1 (ENSOGAG00000004554) #31 ENSOGAG00000033750 AMBRA1 (ENSOGAG00000002355) #32 CHRM4 (ENSOGAG00000033812) #33 MDK (ENSOGAG00000002353) #34 DGKZ (ENSOGAG00000002350) #36 CREB3L1 (ENSOGAG00000008829) #37 Lemuriformes ANCESTRAL SPECIES 16 ENSGT00940000154479.a ENSGT00390000017480 #8 ENSGT00940000158775 #9 ENSGT00390000014065 #10 ENSGT00940000158970 #11 ENSGT00390000016785 #12 ENSGT01020000230346.E #13 ENSGT00940000157349 #14 ENSGT00940000159754 #15 ENSGT00940000157698.b #16 ENSGT00940000156718 #17 ENSGT00940000159068 #18 ENSGT00940000158446 #19 ENSGT00510000047881 #20 ENSGT00950000182973.b.a #21 ENSGT00940000155568 #22 ENSGT00390000012935 #23 ENSGT00940000158287 #24 ENSGT00390000014757 #25 ENSGT00940000154234.b #26 ENSGT00930000151062 #27 ENSGT00940000160630 #28 ENSGT00390000007055 #30 ENSGT00940000154348.c.b.a #31 ENSGT00390000016223 #32 ENSGT00940000160394.a #33 ENSGT00390000007640.b #34 ENSGT00940000156152 #36 ENSGT00940000159848 #37 ENSGT00940000156124 ENSGT00940000158758 Mouse lemur DUPLICATION Mouse lemur MODERN SPECIES 169 ATP2B3 (ENSMICG00000000010) BGN (ENSMICG00000000009) HAUS7 (ENSMICG00000000008) TREX2 (ENSMICG00000038278) ZFP92 (ENSMICG00000011893) ENSMICG00000046759 ENSMICG00000046490 ZNF185 (ENSMICG00000005873) NSDHL (ENSMICG00000005868) ENSMICG00000005862 GABRQ (ENSMICG00000047310) ENSMICG00000013442 ENSMICG00000012692 GABRA3 (ENSMICG00000042718) GABRE (ENSMICG00000045186) ENSMICG00000032242 #22 ENSMICG00000005713 CNGA2 (ENSMICG00000046266) FATE1 (ENSMICG00000047061) PRRG3 (ENSMICG00000030324) ENSMICG00000043308 VMA21 (ENSMICG00000030051) ENSMICG00000045012 ENSMICG00000029488 MAMLD1 (ENSMICG00000017610) MTM1 (ENSMICG00000033650) MTMR1 (ENSMICG00000004344) ENSMICG00000015345 CD99L2 (ENSMICG00000004350) GPR50 (ENSMICG00000034484) ENSMICG00000028536 Mouse lemur MODERN SPECIES 27 NDUFS3 (ENSMICG00000045989) #8 KBTBD4 (ENSMICG00000001087) #9 PTPMT1 (ENSMICG00000028273) #10 CELF1 (ENSMICG00000045113) #11 ENSMICG00000043341 RAPSN (ENSMICG00000007148) #12 PSMC3 (ENSMICG00000007138) #13 SLC39A13 (ENSMICG00000007125) #14 SPI1 (ENSMICG00000007120) #15 MYBPC3 (ENSMICG00000007096) #16 MADD (ENSMICG00000007074) #17 NR1H3 (ENSMICG00000007066) #18 ACP2 (ENSMICG00000007053) #19 DDB2 (ENSMICG00000007047) #20 PACSIN3 (ENSMICG00000007038) #21 ENSMICG00000007019 #22 CSTPP1 (ENSMICG00000007010) #23 LRP4 (ENSMICG00000006982) #24 CKAP5 (ENSMICG00000006951) #25 F2 (ENSMICG00000006934) #26 ZNF408 (ENSMICG00000045320) #27 ARHGAP1 (ENSMICG00000006918) #28 ATG13 (ENSMICG00000006905) #30 HARBI1 (ENSMICG00000029266) #31 AMBRA1 (ENSMICG00000006891) #32 CHRM4 (ENSMICG00000042428) #33 MDK (ENSMICG00000006889) #34 DGKZ (ENSMICG00000006865) #36 CREB3L1 (ENSMICG00000006853) #37 PHF21A (ENSMICG00000014259) LARGE2 (ENSMICG00000014226) Lemuriformes_a ANCESTRAL SPECIES 75 ENSGT00940000154479.a ENSGT00390000017480 #8 ENSGT00940000158775 #9 ENSGT00390000014065 #10 ENSGT00940000158970 #11 ENSGT00390000016785 #12 ENSGT01020000230346.E #13 ENSGT00940000157349 #14 ENSGT00940000159754 #15 ENSGT00940000157698.b #16 ENSGT00940000156718 #17 ENSGT00940000159068 #18 ENSGT00940000158446 #19 ENSGT00510000047881 #20 ENSGT00950000182973.b.a #21 ENSGT00940000155568 #22 ENSGT00390000012935 #23 ENSGT00940000158287 #24 ENSGT00390000014757 #25 ENSGT00940000154234.b #26 ENSGT00930000151062 #27 ENSGT00940000160630 #28 ENSGT00390000007055 #30 ENSGT00940000154348.c.b.a #31 ENSGT00390000016223 #32 ENSGT00940000160394.a #33 ENSGT00390000007640.b #34 ENSGT00940000156152 #36 ENSGT00940000159848 #37 ENSGT00940000156124 ENSGT00940000158758 Coquerels sifaka MODERN SPECIES 328 FAM180B (ENSPCOG00000014736) NDUFS3 (ENSPCOG00000012926) #8 KBTBD4 (ENSPCOG00000017241) #9 PTPMT1 (ENSPCOG00000026725) #10 CELF1 (ENSPCOG00000021865) #11 RAPSN (ENSPCOG00000019055) #12 PSMC3 (ENSPCOG00000020878) #13 SLC39A13 (ENSPCOG00000020868) #14 SPI1 (ENSPCOG00000026208) #15 MYBPC3 (ENSPCOG00000018047) #16 MADD (ENSPCOG00000013832) #17 NR1H3 (ENSPCOG00000023831) #18 ACP2 (ENSPCOG00000027729) #19 DDB2 (ENSPCOG00000022207) #20 PACSIN3 (ENSPCOG00000020469) #21 ARFGAP2 (ENSPCOG00000028490) #22 CSTPP1 (ENSPCOG00000013763) #23 LRP4 (ENSPCOG00000028608) #24 CKAP5 (ENSPCOG00000017517) #25 F2 (ENSPCOG00000018345) #26 ZNF408 (ENSPCOG00000028698) #27 ARHGAP1 (ENSPCOG00000020308) #28 ATG13 (ENSPCOG00000023763) #30 HARBI1 (ENSPCOG00000027989) #31 AMBRA1 (ENSPCOG00000028231) #32 CHRM4 (ENSPCOG00000013773) #33 MDK (ENSPCOG00000017622) #34 DGKZ (ENSPCOG00000026865) #36 CREB3L1 (ENSPCOG00000025289) #37 PHF21A (ENSPCOG00000005609) LARGE2 (ENSPCOG00000000893) Greater bamboo lemur MODERN SPECIES 1076 FAM180B (ENSPSMG00000019935) NDUFS3 (ENSPSMG00000019959) #8 KBTBD4 (ENSPSMG00000019995) #9 PTPMT1 (ENSPSMG00000020020) #10 CELF1 (ENSPSMG00000020100) #11 RAPSN (ENSPSMG00000020171) #12 PSMC3 (ENSPSMG00000020244) #13 SLC39A13 (ENSPSMG00000020336) #14 SPI1 (ENSPSMG00000020380) #15 MYBPC3 (ENSPSMG00000020533) #16 MADD (ENSPSMG00000021740) #17 NR1H3 (ENSPSMG00000022646) #18 ACP2 (ENSPSMG00000022714) #19 DDB2 (ENSPSMG00000022768) #20 PACSIN3 (ENSPSMG00000022785) #21 ARFGAP2 (ENSPSMG00000022927) #22 CSTPP1 (ENSPSMG00000022997) #23 Laurasiatheria ANCESTRAL SPECIES 1 ENSGT00940000154479.a ENSGT00390000017480 #8 ENSGT00940000158775 #9 ENSGT00390000014065 #10 ENSGT00940000158970 #11 ENSGT00390000016785 #12 ENSGT01020000230346.E #13 ENSGT00940000157349 #14 ENSGT00940000159754 #15 ENSGT00940000157698.b #16 ENSGT00940000156718 #17 ENSGT00940000159068 #18 ENSGT00940000158446 #19 ENSGT00510000047881 #20 ENSGT00950000182973.b.a #21 ENSGT00940000155568 #22 ENSGT00390000012935 #23 ENSGT00940000158287 #24 ENSGT00390000014757 #25 ENSGT00940000154234.b #26 ENSGT00930000151062 #27 ENSGT00940000160630 #28 ENSGT00390000007055 #30 ENSGT00940000154348.c.b.a #31 ENSGT00910000148141 ENSGT00390000016223 #32 ENSGT00940000160394.a #33 ENSGT00390000007640.b #34 ENSGT00940000156152 #36 ENSGT00940000159848 #37 ENSGT00940000156124 Laurasiatheria_a ANCESTRAL SPECIES 1 ENSGT00940000154479.a ENSGT00390000017480 #8 ENSGT00940000158775 #9 ENSGT00390000014065 #10 ENSGT00940000158970 #11 ENSGT00390000016785 #12 ENSGT01020000230346.E #13 ENSGT00940000157349 #14 ENSGT00940000159754 #15 ENSGT00940000157698.b #16 ENSGT00940000156718 #17 ENSGT00940000159068 #18 ENSGT00940000158446 #19 ENSGT00510000047881 #20 ENSGT00950000182973.b.a #21 ENSGT00940000155568 #22 ENSGT00390000012935 #23 ENSGT00940000158287 #24 ENSGT00390000014757 #25 ENSGT00940000154234.b #26 ENSGT00930000151062 #27 ENSGT00940000160630 #28 ENSGT00390000007055 #30 ENSGT00940000154348.c.b.a #31 ENSGT00910000148141 ENSGT00390000016223 #32 ENSGT00940000160394.a #33 ENSGT00390000007640.b #34 ENSGT00940000156152 #36 ENSGT00940000159848 #37 ENSGT00940000156124 Laurasiatheria_b ANCESTRAL SPECIES 1 ENSGT00940000154479.a ENSGT00390000017480 #8 ENSGT00940000158775 #9 ENSGT00390000014065 #10 ENSGT00940000158970 #11 ENSGT00390000016785 #12 ENSGT01020000230346.E #13 ENSGT00940000157349 #14 ENSGT00940000159754 #15 ENSGT00940000157698.b #16 ENSGT00940000156718 #17 ENSGT00940000159068 #18 ENSGT00940000158446 #19 ENSGT00510000047881 #20 ENSGT00950000182973.b.a #21 ENSGT00940000155568 #22 ENSGT00390000012935 #23 ENSGT00940000158287 #24 ENSGT00390000014757 #25 ENSGT00940000154234.b #26 ENSGT00930000151062 #27 ENSGT00940000160630 #28 ENSGT00390000007055 #30 ENSGT00940000154348.c.b.a #31 ENSGT00910000148141 ENSGT00390000016223 #32 ENSGT00940000160394.a #33 ENSGT00390000007640.b #34 ENSGT00940000156152 #36 ENSGT00940000159848 #37 ENSGT00940000156124 Carnivora ANCESTRAL SPECIES 7 ENSGT00940000154479.a ENSGT00390000017480 #8 ENSGT00940000158775 #9 ENSGT00390000014065 #10 ENSGT00940000158970 #11 ENSGT00390000016785 #12 ENSGT01020000230346.E #13 ENSGT00940000157349 #14 ENSGT00940000159754 #15 ENSGT00940000157698.b #16 ENSGT00940000156718 #17 ENSGT00940000159068 #18 ENSGT00940000158446 #19 ENSGT00510000047881 #20 ENSGT00950000182973.b.a #21 ENSGT00940000155568 #22 ENSGT00390000012935 #23 ENSGT00940000158287 #24 ENSGT00390000014757 #25 ENSGT00940000154234.b #26 ENSGT00930000151062 #27 ENSGT00940000160630 #28 ENSGT00390000007055 #30 ENSGT00940000154348.c.b.a #31 ENSGT00910000148141 ENSGT00390000016223 #32 ENSGT00940000160394.a #33 ENSGT00390000007640.b #34 ENSGT00940000156152 #36 ENSGT00940000159848 #37 ENSGT00940000156124 Caniformia ANCESTRAL SPECIES 25 ENSGT00940000154479.a ENSGT00390000017480 #8 ENSGT00940000158775 #9 ENSGT00390000014065 #10 ENSGT00940000158970 #11 ENSGT00390000016785 #12 ENSGT01020000230346.E #13 ENSGT00940000157349 #14 ENSGT00940000159754 #15 ENSGT00940000157698.b #16 ENSGT00940000156718 #17 ENSGT00940000159068 #18 ENSGT00940000158446 #19 ENSGT00510000047881 #20 ENSGT00950000182973.b.a #21 ENSGT00940000155568 #22 ENSGT00390000012935 #23 ENSGT00940000158287 #24 ENSGT00390000014757 #25 ENSGT00940000154234.b #26 ENSGT00930000151062 #27 ENSGT00940000160630 #28 ENSGT00390000007055 #30 ENSGT00940000154348.c.b.a #31 ENSGT00910000148141 ENSGT00390000016223 #32 ENSGT00940000160394.a #33 ENSGT00390000007640.b #34 ENSGT00940000156152 #36 ENSGT00940000159848 #37 ENSGT00940000156124 Caniformia_b ANCESTRAL SPECIES 3 ENSGT00940000154479.a ENSGT00390000017480 #8 ENSGT00940000158775 #9 ENSGT00390000014065 #10 ENSGT00940000158970 #11 ENSGT00390000016785 #12 ENSGT01020000230346.E #13 ENSGT00940000157349 #14 ENSGT00940000159754 #15 ENSGT00940000157698.b #16 ENSGT00940000156718 #17 ENSGT00940000159068 #18 ENSGT00940000158446 #19 ENSGT00510000047881 #20 ENSGT00950000182973.b.a #21 ENSGT00940000155568 #22 ENSGT00390000012935 #23 ENSGT00940000158287 #24 ENSGT00390000014757 #25 ENSGT00940000154234.b #26 ENSGT00930000151062 #27 ENSGT00940000160630 #28 ENSGT00390000007055 #30 ENSGT00940000154348.c.b.a #31 ENSGT00910000148141 ENSGT00390000016223 #32 ENSGT00940000160394.a #33 ENSGT00390000007640.b #34 ENSGT00940000156152 #36 ENSGT00940000159848 #37 ENSGT00940000156124 Ursidae ANCESTRAL SPECIES 2 ENSGT00940000154479.a ENSGT00390000017480 #8 ENSGT00940000158775 #9 ENSGT00390000014065 #10 ENSGT00940000158970 #11 ENSGT00390000016785 #12 ENSGT01020000230346.E #13 ENSGT00940000157349 #14 ENSGT00940000159754 #15 ENSGT00940000157698.b #16 ENSGT00940000156718 #17 ENSGT00940000159068 #18 ENSGT00940000158446 #19 ENSGT00510000047881 #20 ENSGT00950000182973.b.a #21 ENSGT00940000155568 #22 ENSGT00390000012935 #23 ENSGT00940000158287 #24 ENSGT00390000014757 #25 ENSGT00940000154234.b #26 ENSGT00930000151062 #27 ENSGT00940000160630 #28 ENSGT00390000007055 #30 ENSGT00940000154348.c.b.a #31 ENSGT00910000148141 ENSGT00390000016223 #32 ENSGT00940000160394.a #33 ENSGT00390000007640.b #34 ENSGT00940000156152 #36 ENSGT00940000159848 #37 ENSGT00940000156124 Ursus ANCESTRAL SPECIES 85 ENSGT00940000154479.a ENSGT00390000017480 #8 ENSGT00940000158775 #9 ENSGT00390000014065 #10 ENSGT00940000158970 #11 ENSGT00390000016785 #12 ENSGT01020000230346.E #13 ENSGT00940000157349 #14 ENSGT00940000159754 #15 ENSGT00940000157698.b #16 ENSGT00940000156718 #17 ENSGT00940000159068 #18 ENSGT00940000158446 #19 ENSGT00510000047881 #20 ENSGT00950000182973.b.a #21 ENSGT00940000155568 #22 ENSGT00390000012935 #23 ENSGT00940000158287 #24 ENSGT00390000014757 #25 ENSGT00940000154234.b #26 ENSGT00930000151062 #27 ENSGT00940000160630 #28 ENSGT00390000007055 #30 ENSGT00940000154348.c.b.a #31 ENSGT00910000148141 ENSGT00390000016223 #32 ENSGT00940000160394.a #33 ENSGT00390000007640.b #34 ENSGT00940000156152 #36 ENSGT00940000159848 #37 ENSGT00940000156124 American black bear MODERN SPECIES 4876 NR1H3 (ENSUAMG00000002590) #18 ACP2 (ENSUAMG00000002864) #19 DDB2 (ENSUAMG00000003455) #20 PACSIN3 (ENSUAMG00000003457) #21 ARFGAP2 (ENSUAMG00000003461) #22 CSTPP1 (ENSUAMG00000003474) #23 Polar bear MODERN SPECIES 229 FAM180B (ENSUMAG00000009202) NDUFS3 (ENSUMAG00000009205) #8 KBTBD4 (ENSUMAG00000009210) #9 PTPMT1 (ENSUMAG00000009215) #10 CELF1 (ENSUMAG00000009218) #11 RAPSN (ENSUMAG00000009220) #12 PSMC3 (ENSUMAG00000009232) #13 SLC39A13 (ENSUMAG00000009241) #14 SPI1 (ENSUMAG00000009255) #15 MYBPC3 (ENSUMAG00000009303) #16 MADD (ENSUMAG00000009893) #17 NR1H3 (ENSUMAG00000014293) #18 ACP2 (ENSUMAG00000014297) #19 DDB2 (ENSUMAG00000014299) #20 PACSIN3 (ENSUMAG00000014303) #21 ARFGAP2 (ENSUMAG00000014307) #22 CSTPP1 (ENSUMAG00000014321) #23 LRP4 (ENSUMAG00000014330) #24 CKAP5 (ENSUMAG00000014345) #25 F2 (ENSUMAG00000014382) #26 ZNF408 (ENSUMAG00000014405) #27 ARHGAP1 (ENSUMAG00000014408) #28 ATG13 (ENSUMAG00000014415) #30 HARBI1 (ENSUMAG00000014427) #31 AMBRA1 (ENSUMAG00000014438) #32 MDK (ENSUMAG00000014474) #34 DGKZ (ENSUMAG00000014597) #36 CREB3L1 (ENSUMAG00000015322) #37 PHF21A (ENSUMAG00000015340) LARGE2 (ENSUMAG00000015352) PEX16 (ENSUMAG00000015365) Giant Panda MODERN SPECIES 7 FAM180B (ENSAMEG00000007683) NDUFS3 (ENSAMEG00000007649) #8 KBTBD4 (ENSAMEG00000007634) #9 PTPMT1 (ENSAMEG00000007624) #10 CELF1 (ENSAMEG00000007596) #11 RAPSN (ENSAMEG00000007575) #12 PSMC3 (ENSAMEG00000007538) #13 SLC39A13 (ENSAMEG00000007505) #14 SPI1 (ENSAMEG00000030284) #15 MYBPC3 (ENSAMEG00000007362) #16 MADD (ENSAMEG00000007321) #17 NR1H3 (ENSAMEG00000007298) #18 ACP2 (ENSAMEG00000007273) #19 DDB2 (ENSAMEG00000007255) #20 PACSIN3 (ENSAMEG00000007225) #21 ARFGAP2 (ENSAMEG00000007175) #22 CSTPP1 (ENSAMEG00000007146) #23 LRP4 (ENSAMEG00000007069) #24 CKAP5 (ENSAMEG00000006979) #25 F2 (ENSAMEG00000006910) #26 ZNF408 (ENSAMEG00000006904) #27 ARHGAP1 (ENSAMEG00000006844) #28 ATG13 (ENSAMEG00000006798) #30 HARBI1 (ENSAMEG00000006795) #31 ENSAMEG00000023608 AMBRA1 (ENSAMEG00000006762) #32 CHRM4 (ENSAMEG00000020060) #33 MDK (ENSAMEG00000006752) #34 DGKZ (ENSAMEG00000006657) #36 CREB3L1 (ENSAMEG00000006633) #37 PHF21A (ENSAMEG00000000598) Mustelinae ANCESTRAL SPECIES 74 ENSGT00940000154479.a ENSGT00390000017480 #8 ENSGT00940000158775 #9 ENSGT00390000014065 #10 ENSGT00940000158970 #11 ENSGT00390000016785 #12 ENSGT01020000230346.E #13 ENSGT00940000157349 #14 ENSGT00940000159754 #15 ENSGT00940000157698.b #16 ENSGT00940000156718 #17 ENSGT00940000159068 #18 ENSGT00940000158446 #19 ENSGT00510000047881 #20 ENSGT00950000182973.b.a #21 ENSGT00940000155568 #22 ENSGT00390000012935 #23 ENSGT00940000158287 #24 ENSGT00390000014757 #25 ENSGT00940000154234.b #26 ENSGT00930000151062 #27 ENSGT00940000160630 #28 ENSGT00390000007055 #30 ENSGT00940000154348.c.b.a #31 ENSGT00390000016223 #32 ENSGT00940000160394.a #33 ENSGT00390000007640.b #34 ENSGT00940000156152 #36 ENSGT00940000159848 #37 ENSGT00940000156124 ENSGT00940000158758 Ferret MODERN SPECIES 255 FAM180B (ENSMPUG00000003869) NDUFS3 (ENSMPUG00000003880) #8 KBTBD4 (ENSMPUG00000003932) #9 PTPMT1 (ENSMPUG00000003938) #10 CELF1 (ENSMPUG00000003960) #11 RAPSN (ENSMPUG00000003974) #12 SLC39A13 (ENSMPUG00000003979) #14 PSMC3 (ENSMPUG00000003992) #13 SPI1 (ENSMPUG00000004125) #15 MYBPC3 (ENSMPUG00000004128) #16 MADD (ENSMPUG00000004775) #17 NR1H3 (ENSMPUG00000004787) #18 ACP2 (ENSMPUG00000004871) #19 DDB2 (ENSMPUG00000004880) #20 PACSIN3 (ENSMPUG00000004892) #21 ARFGAP2 (ENSMPUG00000005012) #22 CSTPP1 (ENSMPUG00000005029) #23 LRP4 (ENSMPUG00000005034) #24 CKAP5 (ENSMPUG00000005279) #25 F2 (ENSMPUG00000005310) #26 ZNF408 (ENSMPUG00000005490) #27 ARHGAP1 (ENSMPUG00000005499) #28 ATG13 (ENSMPUG00000005512) #30 HARBI1 (ENSMPUG00000005540) #31 AMBRA1 (ENSMPUG00000005552) #32 CHRM4 (ENSMPUG00000018440) #33 MDK (ENSMPUG00000005575) #34 DGKZ (ENSMPUG00000005616) #36 CREB3L1 (ENSMPUG00000005639) #37 PHF21A (ENSMPUG00000005646) LARGE2 (ENSMPUG00000005660) American mink MODERN SPECIES 45 FAM180B (ENSNVIG00000010117) NDUFS3 (ENSNVIG00000010127) #8 KBTB4 (ENSNVIG00000010139) #9 PTPMT1 (ENSNVIG00000010173) #10 CELF1 (ENSNVIG00000010227) #11 RAPSN (ENSNVIG00000010353) #12 PSMC3 (ENSNVIG00000010384) #13 SLC39A13 (ENSNVIG00000010448) #14 SPI1 (ENSNVIG00000010511) #15 MYBPC3 (ENSNVIG00000010535) #16 MADD (ENSNVIG00000010799) #17 NR1H3 (ENSNVIG00000011492) #18 ACP2 (ENSNVIG00000011563) #19 DDB2 (ENSNVIG00000011648) #20 PACSIN3 (ENSNVIG00000011680) #21 ARFGAP2 (ENSNVIG00000011708) #22 CK049 (ENSNVIG00000011836) #23 LRP4 (ENSNVIG00000011939) #24 CKAP5 (ENSNVIG00000012011) #25 F2 (ENSNVIG00000012216) #26 ZNF408 (ENSNVIG00000012294) #27 ATG13 (ENSNVIG00000012327) #30 HARB1 (ENSNVIG00000012442) #31 AMBRA1 (ENSNVIG00000012478) #32 CHRM4 (ENSNVIG00000012697) #33 ENSNVIG00000012699 #34 DGKZ (ENSNVIG00000012726) #36 CREB3L1 (ENSNVIG00000012921) #37 PHF21A (ENSNVIG00000012951) LARGE2 (ENSNVIG00000013006) PEX16 (ENSNVIG00000013046) Canidae ANCESTRAL SPECIES 13 ENSGT00940000154479.a ENSGT00390000017480.h #8 ENSGT00940000158775 #9 ENSGT00390000014065 #10 ENSGT00940000158970 #11 ENSGT00390000016785 #12 ENSGT01020000230346.E #13 ENSGT00940000157349 #14 ENSGT00940000159754 #15 ENSGT00940000157698.b #16 ENSGT00940000156718 #17 ENSGT00940000159068 #18 ENSGT00940000158446 #19 ENSGT00510000047881 #20 ENSGT00950000182973.b.a #21 ENSGT00940000155568 #22 ENSGT00390000012935 #23 ENSGT00940000158287 #24 ENSGT00390000014757 #25 ENSGT00940000154234.b #26 ENSGT00930000151062 #27 ENSGT00940000160630 #28 ENSGT00390000007055 #30 ENSGT00940000154348.c.b.a #31 ENSGT00390000016223 #32 ENSGT00940000160394.a #33 ENSGT00390000007640.b.e.a #34 ENSGT00940000156152 #36 ENSGT00940000159848 #37 ENSGT00940000156124 ENSGT00940000158758 Canis_lupus ANCESTRAL SPECIES 7 ENSGT00940000154479.a ENSGT00390000017480.h #8 ENSGT00940000158775 #9 ENSGT00390000014065 #10 ENSGT00940000158970 #11 ENSGT00390000016785 #12 ENSGT01020000230346.E.u #13 ENSGT00940000157349 #14 ENSGT00940000159754 #15 ENSGT00940000157698.b #16 ENSGT00940000156718 #17 ENSGT00940000159068 #18 ENSGT00940000158446 #19 ENSGT00510000047881 #20 ENSGT00950000182973.b.a #21 ENSGT00940000155568 #22 ENSGT00390000012935 #23 ENSGT00940000158287 #24 ENSGT00390000014757 #25 ENSGT00940000154234.b #26 ENSGT00930000151062 #27 ENSGT00940000160630 #28 ENSGT00390000007055 #30 ENSGT00940000154348.c.b.a #31 ENSGT00390000016223 #32 ENSGT00940000160394.a #33 ENSGT00390000007640.b.e.a #34 ENSGT00940000156152 #36 ENSGT00940000159848 #37 ENSGT00940000156124 ENSGT00940000158758 Dingo MODERN SPECIES 69 FAM180B (ENSCAFG00020025564) ENSCAFG00020025563 #8 KBTBD4 (ENSCAFG00020025561) #9 PTPMT1 (ENSCAFG00020025558) #10 CELF1 (ENSCAFG00020025487) #11 RAPSN (ENSCAFG00020025481) #12 ENSCAFG00020025479 #13 SLC39A13 (ENSCAFG00020025475) #14 SPI1 (ENSCAFG00020025473) #15 MYBPC3 (ENSCAFG00020025458) #16 MADD (ENSCAFG00020022385) #17 NR1H3 (ENSCAFG00020022209) #18 ACP2 (ENSCAFG00020022205) #19 DDB2 (ENSCAFG00020022201) #20 PACSIN3 (ENSCAFG00020022195) #21 ARFGAP2 (ENSCAFG00020022191) #22 CSTPP1 (ENSCAFG00020022185) #23 LRP4 (ENSCAFG00020022152) #24 CKAP5 (ENSCAFG00020019305) #25 F2 (ENSCAFG00020019158) #26 ZNF408 (ENSCAFG00020019155) #27 ARHGAP1 (ENSCAFG00020019150) #28 ATG13 (ENSCAFG00020019142) #30 HARBI1 (ENSCAFG00020019139) #31 AMBRA1 (ENSCAFG00020019116) #32 CHRM4 (ENSCAFG00020019111) #33 ENSCAFG00020019107 #34 DGKZ (ENSCAFG00020019055) #36 CREB3L1 (ENSCAFG00020019008) #37 PHF21A (ENSCAFG00020018990) LARGE2 (ENSCAFG00020018489) Dog MODERN SPECIES 9 FAM180B (ENSCAFG00845020398) ENSCAFG00845020432 #8 KBTBD4 (ENSCAFG00845020495) #9 PTPMT1 (ENSCAFG00845020551) #10 CELF1 (ENSCAFG00845020631) #11 RAPSN (ENSCAFG00845020952) #12 ENSCAFG00845021252 #13 SLC39A13 (ENSCAFG00845021469) #14 SPI1 (ENSCAFG00845021614) #15 MYBPC3 (ENSCAFG00845021902) #16 MADD (ENSCAFG00845023101) #17 NR1H3 (ENSCAFG00845024090) #18 ACP2 (ENSCAFG00845024517) #19 DDB2 (ENSCAFG00845024798) #20 PACSIN3 (ENSCAFG00845025012) #21 ARFGAP2 (ENSCAFG00845025262) #22 CSTPP1 (ENSCAFG00845025843) #23 LRP4 (ENSCAFG00845026118) #24 CKAP5 (ENSCAFG00845026513) #25 F2 (ENSCAFG00845026955) #26 ZNF408 (ENSCAFG00845027019) #27 ARHGAP1 (ENSCAFG00845027069) #28 ATG13 (ENSCAFG00845027292) #30 HARBI1 (ENSCAFG00845027517) #31 AMBRA1 (ENSCAFG00845027652) #32 ENSCAFG00845028115 CHRM4 (ENSCAFG00845028143) #33 ENSCAFG00845028187 #34 DGKZ (ENSCAFG00845028466) #36 CREB3L1 (ENSCAFG00845028997) #37 PHF21A (ENSCAFG00845029086) Red fox MODERN SPECIES 49 KBTBD4 (ENSVVUG00000023426) #9 ENSVVUG00000023430 NDUFS3 (ENSVVUG00000023433) #8 PTPMT1 (ENSVVUG00000023435) #10 CELF1 (ENSVVUG00000023439) #11 RAPSN (ENSVVUG00000023449) #12 PSMC3 (ENSVVUG00000023452) #13 SLC39A13 (ENSVVUG00000023457) #14 SPI1 (ENSVVUG00000023463) #15 MYBPC3 (ENSVVUG00000023562) #16 MADD (ENSVVUG00000025425) #17 NR1H3 (ENSVVUG00000026170) #18 ACP2 (ENSVVUG00000026189) #19 DDB2 (ENSVVUG00000026319) #20 PACSIN3 (ENSVVUG00000026352) #21 ARFGAP2 (ENSVVUG00000026397) #22 CSTPP1 (ENSVVUG00000026503) #23 LRP4 (ENSVVUG00000026554) #24 CKAP5 (ENSVVUG00000026762) #25 F2 (ENSVVUG00000026767) #26 ZNF408 (ENSVVUG00000026805) #27 ARHGAP1 (ENSVVUG00000026807) #28 ATG13 (ENSVVUG00000026821) #30 HARBI1 (ENSVVUG00000026967) #31 AMBRA1 (ENSVVUG00000026969) #32 CHRM4 (ENSVVUG00000026978) #33 MDK (ENSVVUG00000026979) #34 DGKZ (ENSVVUG00000026981) #36 CREB3L1 (ENSVVUG00000026984) #37 PHF21A (ENSVVUG00000026999) LARGE2 (ENSVVUG00000027012) Felidae ANCESTRAL SPECIES ENSGT00940000154479.a ENSGT00390000017480 #8 ENSGT00940000158775 #9 ENSGT00390000014065 #10 ENSGT00940000158970 #11 ENSGT00390000016785 #12 ENSGT01020000230346.E #13 ENSGT00940000157349 #14 ENSGT00940000159754 #15 ENSGT00940000157698.b #16 ENSGT00940000156718 #17 ENSGT00940000159068 #18 ENSGT00940000158446 #19 ENSGT00510000047881 #20 ENSGT00950000182973.b.a #21 ENSGT00940000155568 #22 ENSGT00390000012935 #23 ENSGT00940000158287 #24 ENSGT00390000014757 #25 ENSGT00940000154234.b #26 ENSGT00500000045038.m.a.a ENSGT00930000151062 #27 ENSGT00940000160630 #28 ENSGT00390000007055 #30 ENSGT00940000154348.c.b.a #31 ENSGT00390000016223 #32 ENSGT00940000160394.a #33 ENSGT00390000007640.b #34 ENSGT00940000156152 #36 ENSGT00940000159848 #37 ENSGT00940000156124 Panthera ANCESTRAL SPECIES 13 ENSGT00940000154479.a ENSGT00390000017480 #8 ENSGT00940000158775 #9 ENSGT00390000014065 #10 ENSGT00940000158970 #11 ENSGT00390000016785 #12 ENSGT01020000230346.E #13 ENSGT00940000157349 #14 ENSGT00940000159754 #15 ENSGT00940000157698.b #16 ENSGT00940000156718 #17 ENSGT00940000159068 #18 ENSGT00940000158446 #19 ENSGT00510000047881 #20 ENSGT00950000182973.b.a #21 ENSGT00940000155568 #22 ENSGT00390000012935 #23 ENSGT00940000158287 #24 ENSGT00390000014757 #25 ENSGT00940000154234.b #26 ENSGT00500000045038.m.a.a ENSGT00930000151062 #27 ENSGT00940000160630 #28 ENSGT00390000007055 #30 ENSGT00940000154348.c.b.a #31 ENSGT00390000016223 #32 ENSGT00940000160394.a #33 ENSGT00390000007640.b #34 ENSGT00940000156152 #36 ENSGT00940000159848 #37 ENSGT00940000156124 Tiger MODERN SPECIES 168 FAM180B (ENSPTIG00000007108) NDUFS3 (ENSPTIG00000006928) #8 KBTBD4 (ENSPTIG00000006244) #9 PTPMT1 (ENSPTIG00000005838) #10 CELF1 (ENSPTIG00000003974) #11 RAPSN (ENSPTIG00000000869) #12 PSMC3 (ENSPTIG00000021263) #13 SLC39A13 (ENSPTIG00000021132) #14 SPI1 (ENSPTIG00000020982) #15 MYBPC3 (ENSPTIG00000020596) #16 MADD (ENSPTIG00000018995) #17 NR1H3 (ENSPTIG00000018538) #18 ACP2 (ENSPTIG00000018036) #19 DDB2 (ENSPTIG00000017739) #20 PACSIN3 (ENSPTIG00000017528) #21 ARFGAP2 (ENSPTIG00000017136) #22 CSTPP1 (ENSPTIG00000016931) #23 LRP4 (ENSPTIG00000016819) #24 CKAP5 (ENSPTIG00000015717) #25 F2 (ENSPTIG00000015545) #26 ZNF408 (ENSPTIG00000015467) #27 ARHGAP1 (ENSPTIG00000014598) #28 ATG13 (ENSPTIG00000014275) #30 HARBI1 (ENSPTIG00000014054) #31 AMBRA1 (ENSPTIG00000013363) #32 CHRM4 (ENSPTIG00000009949) #33 MDK (ENSPTIG00000012940) #34 DGKZ (ENSPTIG00000012708) #36 CREB3L1 (ENSPTIG00000012554) #37 PHF21A (ENSPTIG00000012098) LARGE2 (ENSPTIG00000012000) Panthera_a ANCESTRAL SPECIES 20 ENSGT00940000154479.a ENSGT00390000017480 #8 ENSGT00940000158775 #9 ENSGT00390000014065 #10 ENSGT00940000158970 #11 ENSGT00390000016785 #12 ENSGT01020000230346.E #13 ENSGT00940000157349 #14 ENSGT00940000159754 #15 ENSGT00940000157698.b #16 ENSGT00940000156718 #17 ENSGT00940000159068 #18 ENSGT00940000158446 #19 ENSGT00510000047881 #20 ENSGT00950000182973.b.a #21 ENSGT00940000155568 #22 ENSGT00390000012935 #23 ENSGT00940000158287 #24 ENSGT00390000014757 #25 ENSGT00940000154234.b #26 ENSGT00500000045038.m.a.a ENSGT00930000151062 #27 ENSGT00940000160630 #28 ENSGT00390000007055 #30 ENSGT00940000154348.c.b.a #31 ENSGT00390000016223 #32 ENSGT00940000160394.a #33 ENSGT00390000007640.b #34 ENSGT00940000156152 #36 ENSGT00940000159848 #37 ENSGT00940000156124 lion MODERN SPECIES 10 FAM180B (ENSPLOG00000007697) NDUFS3 (ENSPLOG00000007679) #8 KBTBD4 (ENSPLOG00000007653) #9 ENSPLOG00000007621 CELF1 (ENSPLOG00000007570) #11 RAPSN (ENSPLOG00000007427) #12 PSMC3 (ENSPLOG00000007292) #13 SLC39A13 (ENSPLOG00000007161) #14 SPI1 (ENSPLOG00000007099) #15 MYBPC3 (ENSPLOG00000006845) #16 MADD (ENSPLOG00000006666) #17 NR1H3 (ENSPLOG00000006535) #18 ACP2 (ENSPLOG00000006391) #19 DDB2 (ENSPLOG00000006264) #20 PACSIN3 (ENSPLOG00000006189) #21 ARFGAP2 (ENSPLOG00000006001) #22 CSTPP1 (ENSPLOG00000005860) #23 LRP4 (ENSPLOG00000005745) #24 CKAP5 (ENSPLOG00000005671) #25 F2 (ENSPLOG00000005576) #26 ENSPLOG00000005532 ZNF408 (ENSPLOG00000005509) #27 ARHGAP1 (ENSPLOG00000005477) #28 ATG13 (ENSPLOG00000005426) #30 HARBI1 (ENSPLOG00000005373) #31 ENSPLOG00000005359 AMBRA1 (ENSPLOG00000005299) #32 CHRM4 (ENSPLOG00000005269) #33 MDK (ENSPLOG00000005259) #34 DGKZ (ENSPLOG00000005116) #36 CREB3L1 (ENSPLOG00000004966) #37 leopard MODERN SPECIES 58 FAM180B (ENSPPRG00000024070) NDUFS3 (ENSPPRG00000023580) #8 KBTBD4 (ENSPPRG00000022635) #9 PTPMT1 (ENSPPRG00000000430) #10 CELF1 (ENSPPRG00000002376) #11 RAPSN (ENSPPRG00000004770) #12 PSMC3 (ENSPPRG00000006737) #13 SLC39A13 (ENSPPRG00000009592) #14 SPI1 (ENSPPRG00000010085) #15 MYBPC3 (ENSPPRG00000024064) #16 MADD (ENSPPRG00000000412) #17 NR1H3 (ENSPPRG00000002008) #18 ACP2 (ENSPPRG00000004019) #19 DDB2 (ENSPPRG00000005739) #20 PACSIN3 (ENSPPRG00000005994) #21 ARFGAP2 (ENSPPRG00000007483) #22 CSTPP1 (ENSPPRG00000008841) #23 LRP4 (ENSPPRG00000009649) #24 CKAP5 (ENSPPRG00000014495) #25 F2 (ENSPPRG00000015996) #26 ENSPPRG00000021564 ZNF408 (ENSPPRG00000016866) #27 ARHGAP1 (ENSPPRG00000017517) #28 ATG13 (ENSPPRG00000024435) #30 HARBI1 (ENSPPRG00000024315) #31 AMBRA1 (ENSPPRG00000000398) #32 CHRM4 (ENSPPRG00000021661) #33 MDK (ENSPPRG00000001591) #34 DGKZ (ENSPPRG00000006446) #36 CREB3L1 (ENSPPRG00000006852) #37 PHF21A (ENSPPRG00000007738) Cat MODERN SPECIES 241 FAM180B (ENSFCAG00000009508) NDUFS3 (ENSFCAG00000040734) #8 KBTBD4 (ENSFCAG00000009499) #9 ENSFCAG00000042609 CELF1 (ENSFCAG00000002535) #11 RAPSN (ENSFCAG00000002534) #12 PSMC3 (ENSFCAG00000002533) #13 SLC39A13 (ENSFCAG00000002532) #14 SPI1 (ENSFCAG00000002531) #15 MYBPC3 (ENSFCAG00000002530) #16 MADD (ENSFCAG00000002529) #17 NR1H3 (ENSFCAG00000002528) #18 ACP2 (ENSFCAG00000002527) #19 DDB2 (ENSFCAG00000025016) #20 PACSIN3 (ENSFCAG00000012631) #21 ARFGAP2 (ENSFCAG00000002525) #22 CSTPP1 (ENSFCAG00000002524) #23 LRP4 (ENSFCAG00000002523) #24 CKAP5 (ENSFCAG00000013640) #25 F2 (ENSFCAG00000029088) #26 ENSFCAG00000041074 ZNF408 (ENSFCAG00000029105) #27 ARHGAP1 (ENSFCAG00000013638) #28 ATG13 (ENSFCAG00000013637) #30 HARBI1 (ENSFCAG00000029910) #31 AMBRA1 (ENSFCAG00000013635) #32 CHRM4 (ENSFCAG00000024780) #33 MDK (ENSFCAG00000023547) #34 DGKZ (ENSFCAG00000013634) #36 CREB3L1 (ENSFCAG00000018794) #37 PHF21A (ENSFCAG00000027311) Laurasiatheria_c ANCESTRAL SPECIES 9 ENSGT00940000154479.a ENSGT00390000017480 #8 ENSGT00940000158775 #9 ENSGT00390000014065 #10 ENSGT00940000158970 #11 ENSGT00390000016785 #12 ENSGT01020000230346.E #13 ENSGT00940000157349 #14 ENSGT00940000159754 #15 ENSGT00940000157698.b #16 ENSGT00940000156718 #17 ENSGT00940000159068 #18 ENSGT00940000158446 #19 ENSGT00510000047881 #20 ENSGT00950000182973.b.a #21 ENSGT00940000155568 #22 ENSGT00390000012935 #23 ENSGT00940000158287 #24 ENSGT00390000014757 #25 ENSGT00940000154234.b #26 ENSGT00930000151062 #27 ENSGT00940000160630 #28 ENSGT00390000007055 #30 ENSGT00940000154348.c.b.a #31 ENSGT00390000016223 #32 ENSGT00940000160394.a #33 ENSGT00390000007640.b #34 ENSGT00940000156152 #36 ENSGT00940000159848 #37 ENSGT00940000156124 ENSGT00940000158758 Equus ANCESTRAL SPECIES 56 ENSGT00940000158775 #9 ENSGT00940000154479.a ENSGT00390000017480.e #8 ENSGT00390000014065 #10 ENSGT00940000158970 #11 ENSGT00390000016785 #12 ENSGT01020000230346.E #13 ENSGT00940000157349 #14 ENSGT00940000159754 #15 ENSGT00940000157698.b #16 ENSGT00940000156718 #17 ENSGT00940000159068 #18 ENSGT00940000158446 #19 ENSGT00510000047881 #20 ENSGT00950000182973.b.a #21 ENSGT00940000155568 #22 ENSGT00390000012935 #23 ENSGT00940000158287 #24 ENSGT00390000014757 #25 ENSGT00940000154234.b #26 ENSGT00930000151062 #27 ENSGT00940000160630 #28 ENSGT00390000007055 #30 ENSGT00940000154348.c.b.a #31 ENSGT00390000016223 #32 ENSGT00940000160394.a #33 ENSGT00390000007640.b #34 ENSGT00940000156152 #36 ENSGT00940000159848 #37 ENSGT00940000156124 ENSGT00940000158758 Horse MODERN SPECIES 3 MTCH2 (ENSECAG00000014198) NDUFS3 (ENSECAG00000013454) #8 KBTBD4 (ENSECAG00000013258) #9 PTPMT1 (ENSECAG00000012816) #10 CELF1 (ENSECAG00000007741) #11 RAPSN (ENSECAG00000003289) #12 PSMC3 (ENSECAG00000024786) #13 SLC39A13 (ENSECAG00000024590) #14 SPI1 (ENSECAG00000024457) #15 MYBPC3 (ENSECAG00000024318) #16 MADD (ENSECAG00000016022) #17 NR1H3 (ENSECAG00000015726) #18 ACP2 (ENSECAG00000013128) #19 DDB2 (ENSECAG00000008711) #20 PACSIN3 (ENSECAG00000025103) #21 ARFGAP2 (ENSECAG00000024744) #22 ENSECAG00000051919 CSTPP1 (ENSECAG00000024739) #23 LRP4 (ENSECAG00000023663) #24 CKAP5 (ENSECAG00000015563) #25 F2 (ENSECAG00000011321) #26 ZNF408 (ENSECAG00000010878) #27 ARHGAP1 (ENSECAG00000009844) #28 ATG13 (ENSECAG00000024606) #30 HARBI1 (ENSECAG00000024452) #31 AMBRA1 (ENSECAG00000023789) #32 CHRM4 (ENSECAG00000023751) #33 ENSECAG00000029071 #34 DGKZ (ENSECAG00000018796) #36 CREB3L1 (ENSECAG00000018306) #37 PHF21A (ENSECAG00000017082) Donkey MODERN SPECIES 8 FAM180B (ENSEASG00005035695) ENSEASG00005010834 #8 KBTBD4 (ENSEASG00005031390) #9 PTPMT1 (ENSEASG00005037371) #10 CELF1 (ENSEASG00005010831) #11 RAPSN (ENSEASG00005010830) #12 PSMC3 (ENSEASG00005010810) #13 SLC39A13 (ENSEASG00005010790) #14 SPI1 (ENSEASG00005010780) #15 MYBPC3 (ENSEASG00005010750) #16 MADD (ENSEASG00005002251) #17 NR1H3 (ENSEASG00005001479) #18 ACP2 (ENSEASG00005001161) #19 DDB2 (ENSEASG00005001051) #20 PACSIN3 (ENSEASG00005000908) #21 ARFGAP2 (ENSEASG00005000180) #22 CSTPP1 (ENSEASG00005017823) #23 LRP4 (ENSEASG00005017791) #24 CKAP5 (ENSEASG00005015601) #25 F2 (ENSEASG00005015463) #26 ZNF408 (ENSEASG00005015461) #27 ARHGAP1 (ENSEASG00005015450) #28 ATG13 (ENSEASG00005015246) #30 HARBI1 (ENSEASG00005015208) #31 AMBRA1 (ENSEASG00005015004) #32 CHRM4 (ENSEASG00005029426) #33 MDK (ENSEASG00005029065) #34 DGKZ (ENSEASG00005014964) #36 CREB3L1 (ENSEASG00005014953) #37 PHF21A (ENSEASG00005014943) LARGE2 (ENSEASG00005014935) Chiroptera ANCESTRAL SPECIES 5 ENSGT00940000154479.a ENSGT00390000017480 #8 ENSGT00940000158775 #9 ENSGT00390000014065.f #10 ENSGT00940000158970 #11 ENSGT00390000016785 #12 ENSGT01020000230346.E #13 ENSGT00940000157349 #14 ENSGT00940000159754 #15 ENSGT00940000157698.b #16 ENSGT00940000156718 #17 ENSGT00940000159068 #18 ENSGT00940000158446 #19 ENSGT00510000047881 #20 ENSGT00950000182973.b.a #21 ENSGT00940000155568 #22 ENSGT00390000012935 #23 ENSGT00940000158287 #24 ENSGT00390000014757 #25 ENSGT00940000154234.b #26 ENSGT00930000151062 #27 ENSGT00940000160630 #28 ENSGT00390000007055 #30 ENSGT00940000154348.c.b.a #31 ENSGT00390000016223 #32 ENSGT00940000160394.a #33 ENSGT00390000007640.b #34 ENSGT00940000156152 #36 ENSGT00940000159848 #37 ENSGT00940000156124 ENSGT00940000158758 Megabat MODERN SPECIES 2434 PACSIN3 (ENSPVAG00000015811) #21 ARFGAP2 (ENSPVAG00000015809) #22 CSTPP1 (ENSPVAG00000015808) #23 LRP4 (ENSPVAG00000015807) #24 CKAP5 (ENSPVAG00000015800) #25 F2 (ENSPVAG00000015792) #26 ZNF408 (ENSPVAG00000015791) #27 ARHGAP1 (ENSPVAG00000015787) #28 ATG13 (ENSPVAG00000015785) #30 Microchiroptera ANCESTRAL SPECIES 31 ENSGT00940000154479.a ENSGT00390000017480 #8 ENSGT00940000158775 #9 ENSGT00390000014065.f #10 ENSGT00940000158970 #11 ENSGT00390000016785 #12 ENSGT01020000230346.E #13 ENSGT00940000157349 #14 ENSGT00940000159754 #15 ENSGT00940000157698.b #16 ENSGT00940000156718 #17 ENSGT00940000159068 #18 ENSGT00940000158446 #19 ENSGT00510000047881 #20 ENSGT00950000182973.b.a #21 ENSGT00940000155568 #22 ENSGT00390000012935 #23 ENSGT00940000158287 #24 ENSGT00390000014757 #25 ENSGT00940000154234.b #26 ENSGT00930000151062 #27 ENSGT00940000160630 #28 ENSGT00390000007055 #30 ENSGT00940000154348.c.b.a #31 ENSGT00390000016223 #32 ENSGT00940000160394.a #33 ENSGT00390000007640.b #34 ENSGT00940000156152 #36 ENSGT00940000159848 #37 ENSGT00940000156124 ENSGT00940000158758 Microbat MODERN SPECIES 1034 MTCH2 (ENSMLUG00000016431) FAM180B (ENSMLUG00000016658) NDUFS3 (ENSMLUG00000016649) #8 KBTBD4 (ENSMLUG00000006745) #9 ENSMLUG00000024269 #10 CELF1 (ENSMLUG00000016631) #11 ENSMLUG00000016626 #12 PSMC3 (ENSMLUG00000016615) #13 SLC39A13 (ENSMLUG00000016608) #14 MYBPC3 (ENSMLUG00000017650) #16 MADD (ENSMLUG00000017647) #17 NR1H3 (ENSMLUG00000017646) #18 ACP2 (ENSMLUG00000017644) #19 DDB2 (ENSMLUG00000017642) #20 PACSIN3 (ENSMLUG00000017640) #21 ARFGAP2 (ENSMLUG00000017637) #22 CSTPP1 (ENSMLUG00000017636) #23 LRP4 (ENSMLUG00000017635) #24 CKAP5 (ENSMLUG00000017633) #25 F2 (ENSMLUG00000017631) #26 ZNF408 (ENSMLUG00000017629) #27 ARHGAP1 (ENSMLUG00000017628) #28 ATG13 (ENSMLUG00000017626) #30 HARBI1 (ENSMLUG00000011485) #31 AMBRA1 (ENSMLUG00000009880) #32 CHRM4 (ENSMLUG00000025622) #33 MDK (ENSMLUG00000022787) #34 DGKZ (ENSMLUG00000009836) #36 CREB3L1 (ENSMLUG00000009820) #37 PHF21A (ENSMLUG00000014773) LARGE2 (ENSMLUG00000014764) Greater horseshoe bat MODERN SPECIES 2 FAM180B (ENSRFEG00010011984) NDUFS3 (ENSRFEG00010012038) #8 KBTBD4 (ENSRFEG00010012114) #9 PTPMT1 (ENSRFEG00010012248) #10 CELF1 (ENSRFEG00010012300) #11 RAPSN (ENSRFEG00010012492) #12 PSMC3 (ENSRFEG00010012635) #13 SLC39A13 (ENSRFEG00010012772) #14 SPI1 (ENSRFEG00010012946) #15 MYBPC3 (ENSRFEG00010013106) #16 MADD (ENSRFEG00010014628) #17 NR1H3 (ENSRFEG00010015025) #18 ACP2 (ENSRFEG00010015250) #19 DDB2 (ENSRFEG00010015496) #20 PACSIN3 (ENSRFEG00010000575) #21 ARFGAP2 (ENSRFEG00010000701) #22 CSTPP1 (ENSRFEG00010000992) #23 LRP4 (ENSRFEG00010001046) #24 CKAP5 (ENSRFEG00010001142) #25 F2 (ENSRFEG00010001400) #26 ZNF408 (ENSRFEG00010001453) #27 ARHGAP1 (ENSRFEG00010001486) #28 ATG13 (ENSRFEG00010001557) #30 HARBI1 (ENSRFEG00010001682) #31 AMBRA1 (ENSRFEG00010001788) #32 CHRM4 (ENSRFEG00010001975) #33 MDK (ENSRFEG00010001996) #34 DGKZ (ENSRFEG00010002446) #36 CREB3L1 (ENSRFEG00010003317) #37 PHF21A (ENSRFEG00010003386) LARGE2 (ENSRFEG00010003418) Artiodactyla ANCESTRAL SPECIES 1 ENSGT00940000154479.a ENSGT00390000017480 #8 ENSGT00940000158775 #9 ENSGT00390000014065 #10 ENSGT00940000158970 #11 ENSGT00390000016785 #12 ENSGT01020000230346.E #13 ENSGT00940000157349 #14 ENSGT00940000159754 #15 ENSGT00940000157698.b #16 ENSGT00940000156718 #17 ENSGT00940000159068 #18 ENSGT00940000158446 #19 ENSGT00510000047881 #20 ENSGT00950000182973.b.a #21 ENSGT00940000155568 #22 ENSGT00390000012935 #23 ENSGT00940000158287 #24 ENSGT00390000014757 #25 ENSGT00940000154234.b #26 ENSGT00930000151062 #27 ENSGT00940000160630 #28 ENSGT00390000007055 #30 ENSGT00940000154348.c.b.a #31 ENSGT00390000016223 #32 ENSGT00940000160394.a #33 ENSGT00390000007640.b #34 ENSGT00940000156152 #36 ENSGT00940000159848 #37 ENSGT00940000156124 ENSGT00940000158758 Suina ANCESTRAL SPECIES 34 ENSGT00940000154479.a ENSGT00390000017480 #8 ENSGT00940000158775 #9 ENSGT00390000014065 #10 ENSGT00940000158970 #11 ENSGT00390000016785 #12 ENSGT01020000230346.E #13 ENSGT00940000157349 #14 ENSGT00940000159754 #15 ENSGT00940000157698.b #16 ENSGT00940000156718 #17 ENSGT00940000159068 #18 ENSGT00940000158446 #19 ENSGT00510000047881 #20 ENSGT00950000182973.b.a #21 ENSGT00940000155568 #22 ENSGT00390000012935 #23 ENSGT00940000158287 #24 ENSGT00390000014757 #25 ENSGT00940000154234.b #26 ENSGT00930000151062 #27 ENSGT00940000160630 #28 ENSGT00390000007055 #30 ENSGT00940000154348.c.b.a #31 ENSGT00390000016223 #32 ENSGT00940000160394.a #33 ENSGT00390000007640.b #34 ENSGT00940000156152 #36 ENSGT00940000159848 #37 ENSGT00940000156124 ENSGT00940000158758 Chacoan peccary MODERN SPECIES 919 NDUFS3 (ENSCWAG00000011975) #8 KBTBD4 (ENSCWAG00000012134) #9 PTPMT1 (ENSCWAG00000012300) #10 CELF1 (ENSCWAG00000012400) #11 RAPSN (ENSCWAG00000012571) #12 PSMC3 (ENSCWAG00000012918) #13 SLC39A13 (ENSCWAG00000013013) #14 ENSCWAG00000013126 SPI1 (ENSCWAG00000013165) #15 MYBPC3 (ENSCWAG00000013297) #16 MADD (ENSCWAG00000014593) #17 NR1H3 (ENSCWAG00000020217) #18 ACP2 (ENSCWAG00000020271) #19 DDB2 (ENSCWAG00000020312) #20 PACSIN3 (ENSCWAG00000020363) #21 ARFGAP2 (ENSCWAG00000020384) #22 CSTPP1 (ENSCWAG00000020423) #23 ENSCWAG00000020438 LRP4 (ENSCWAG00000020453) #24 CKAP5 (ENSCWAG00000020545) #25 F2 (ENSCWAG00000020586) #26 ZNF408 (ENSCWAG00000020629) #27 ARHGAP1 (ENSCWAG00000020638) #28 ATG13 (ENSCWAG00000020671) #30 HARBI1 (ENSCWAG00000020778) #31 AMBRA1 (ENSCWAG00000020799) #32 CHRM4 (ENSCWAG00000020869) #33 MDK (ENSCWAG00000020882) #34 DGKZ (ENSCWAG00000020966) #36 CREB3L1 (ENSCWAG00000021208) #37 PHF21A (ENSCWAG00000021231) Pig MODERN SPECIES 10 C1QTNF4 (ENSSSCG00000013231) #7 FAM180B (ENSSSCG00000013230) NDUFS3 (ENSSSCG00000032081) #8 KBTBD4 (ENSSSCG00000013227) #9 PTPMT1 (ENSSSCG00000013226) #10 CELF1 (ENSSSCG00000013233) #11 PSMC3 (ENSSSCG00000013239) #13 SLC39A13 (ENSSSCG00000013238) #14 SPI1 (ENSSSCG00000013237) #15 MYBPC3 (ENSSSCG00000013236) #16 MADD (ENSSSCG00000013235) #17 NR1H3 (ENSSSCG00000013241) #18 ACP2 (ENSSSCG00000013242) #19 DDB2 (ENSSSCG00000013243) #20 PACSIN3 (ENSSSCG00000013244) #21 ARFGAP2 (ENSSSCG00000013245) #22 CSTPP1 (ENSSSCG00000013246) #23 LRP4 (ENSSSCG00000013248) #24 CKAP5 (ENSSSCG00000013249) #25 ENSSSCG00000048195 F2 (ENSSSCG00000013252) #26 ZNF408 (ENSSSCG00000023097) #27 ARHGAP1 (ENSSSCG00000013256) #28 ATG13 (ENSSSCG00000013257) #30 HARBI1 (ENSSSCG00000013258) #31 AMBRA1 (ENSSSCG00000013262) #32 CHRM4 (ENSSSCG00000013261) #33 MDK (ENSSSCG00000013260) #34 DGKZ (ENSSSCG00000013259) #36 CREB3L1 (ENSSSCG00000013263) #37 PHF21A (ENSSSCG00000023974) Artiodactyla_a ANCESTRAL SPECIES 1 ENSGT00940000154479.a ENSGT00390000017480 #8 ENSGT00940000158775 #9 ENSGT00390000014065 #10 ENSGT00940000158970 #11 ENSGT00390000016785 #12 ENSGT01020000230346.E #13 ENSGT00940000157349 #14 ENSGT00940000159754 #15 ENSGT00940000157698.b #16 ENSGT00940000156718 #17 ENSGT00940000159068 #18 ENSGT00940000158446 #19 ENSGT00510000047881 #20 ENSGT00950000182973.b.a #21 ENSGT00940000155568 #22 ENSGT00390000012935 #23 ENSGT00940000158287 #24 ENSGT00390000014757 #25 ENSGT00940000154234.b #26 ENSGT00930000151062 #27 ENSGT00940000160630 #28 ENSGT00390000007055 #30 ENSGT00940000154348.c.b.a #31 ENSGT00390000016223 #32 ENSGT00940000160394.a #33 ENSGT00390000007640.b #34 ENSGT00940000156152 #36 ENSGT00940000159848 #37 ENSGT00940000156124 ENSGT00940000158758 Camelidae ANCESTRAL SPECIES 25 ENSGT00940000154479.a ENSGT00390000017480 #8 ENSGT00940000158775 #9 ENSGT00390000014065 #10 ENSGT00940000158970 #11 ENSGT00390000016785 #12 ENSGT01020000230346.E #13 ENSGT00940000157349 #14 ENSGT00940000159754 #15 ENSGT00940000157698.b #16 ENSGT00940000156718 #17 ENSGT00940000159068 #18 ENSGT00940000158446 #19 ENSGT00510000047881 #20 ENSGT00950000182973.b.a #21 ENSGT00940000155568 #22 ENSGT00390000012935 #23 ENSGT00940000158287 #24 ENSGT00390000014757 #25 ENSGT00940000154234.b #26 ENSGT00930000151062 #27 ENSGT00940000160630 #28 ENSGT00390000007055 #30 ENSGT00940000154348.c.b.a #31 ENSGT00390000016223 #32 ENSGT00940000160394.a #33 ENSGT00390000007640.b #34 ENSGT00940000156152 #36 ENSGT00940000159848 #37 ENSGT00940000156124 ENSGT00940000158758 Arabian camel MODERN SPECIES 1 FAM180B (ENSCDRG00005001672) NDUFS3 (ENSCDRG00005001699) #8 KBTBD4 (ENSCDRG00005001788) #9 PTPMT1 (ENSCDRG00005001832) #10 CELF1 (ENSCDRG00005001849) #11 RAPSN (ENSCDRG00005001888) #12 PSMC3 (ENSCDRG00005001939) #13 SLC39A13 (ENSCDRG00005001964) #14 SPI1 (ENSCDRG00005001988) #15 MYBPC3 (ENSCDRG00005002015) #16 MADD (ENSCDRG00005002594) #17 NR1H3 (ENSCDRG00005006795) #18 ACP2 (ENSCDRG00005006623) #19 DDB2 (ENSCDRG00005007029) #20 PACSIN3 (ENSCDRG00005007398) #21 ARFGAP2 (ENSCDRG00005007474) #22 CSTPP1 (ENSCDRG00005008190) #23 ENSCDRG00005008443 LRP4 (ENSCDRG00005008476) #24 CKAP5 (ENSCDRG00005008832) #25 F2 (ENSCDRG00005009091) #26 ZNF408 (ENSCDRG00005009244) #27 ARHGAP1 (ENSCDRG00005009320) #28 ATG13 (ENSCDRG00005009422) #30 HARBI1 (ENSCDRG00005009768) #31 AMBRA1 (ENSCDRG00005009861) #32 CHRM4 (ENSCDRG00005010302) #33 MDK (ENSCDRG00005010345) #34 DGKZ (ENSCDRG00005010475) #36 CREB3L1 (ENSCDRG00005011173) #37 PHF21A (ENSCDRG00005011242) Alpaca MODERN SPECIES 3542 ENSVPAG00000011844 #17 NR1H3 (ENSVPAG00000011840) #18 ENSVPAG00000011836 #19 DDB2 (ENSVPAG00000011835) #20 PACSIN3 (ENSVPAG00000011833) #21 ARFGAP2 (ENSVPAG00000011832) #22 ENSVPAG00000011831 #23 LRP4 (ENSVPAG00000011829) #24 CKAP5 (ENSVPAG00000011827) #25 ZNF408 (ENSVPAG00000011825) #27 ATG13 (ENSVPAG00000011823) #30 HARBI1 (ENSVPAG00000011821) #31 AMBRA1 (ENSVPAG00000011817) #32 Artiodactyla_b ANCESTRAL SPECIES 1 ENSGT00940000154479.a ENSGT00390000017480 #8 ENSGT00940000158775 #9 ENSGT00390000014065 #10 ENSGT00940000158970 #11 ENSGT00390000016785 #12 ENSGT01020000230346.E #13 ENSGT00940000157349 #14 ENSGT00940000159754 #15 ENSGT00940000157698.b #16 ENSGT00940000156718 #17 ENSGT00940000159068 #18 ENSGT00940000158446 #19 ENSGT00510000047881 #20 ENSGT00950000182973.b.a #21 ENSGT00940000155568 #22 ENSGT00390000012935 #23 ENSGT00940000158287 #24 ENSGT00390000014757 #25 ENSGT00940000154234.b #26 ENSGT00930000151062 #27 ENSGT00940000160630 #28 ENSGT00390000007055 #30 ENSGT00940000154348.c.b.a #31 ENSGT00390000016223 #32 ENSGT00940000160394.a #33 ENSGT00390000007640.b #34 ENSGT00940000156152 #36 ENSGT00940000159848 #37 ENSGT00940000156124 ENSGT00940000158758 Pecora ANCESTRAL SPECIES 7 ENSGT00940000154479.a ENSGT00390000017480 #8 ENSGT00940000158775 #9 ENSGT00390000014065 #10 ENSGT00940000158970 #11 ENSGT00390000016785 #12 ENSGT01020000230346.E #13 ENSGT00940000157349 #14 ENSGT00940000159754 #15 ENSGT00940000157698.b #16 ENSGT00940000156718 #17 ENSGT00940000159068 #18 ENSGT00940000158446 #19 ENSGT00510000047881 #20 ENSGT00950000182973.b.a #21 ENSGT00940000155568 #22 ENSGT00390000012935 #23 ENSGT00940000158287 #24 ENSGT00390000014757 #25 ENSGT00940000154234.b #26 ENSGT00930000151062 #27 ENSGT00940000160630 #28 ENSGT00390000007055 #30 ENSGT00940000154348.c.b.a #31 ENSGT00390000016223 #32 ENSGT00940000160394.a #33 ENSGT00390000007640.b #34 ENSGT00940000156152 #36 ENSGT00940000159848 #37 ENSGT00940000156124 ENSGT00940000158758 Percora_a ANCESTRAL SPECIES 6 ENSGT00940000154479.a ENSGT00390000017480 #8 ENSGT00940000158775 #9 ENSGT00390000014065 #10 ENSGT00940000158970 #11 ENSGT00390000016785 #12 ENSGT01020000230346.E #13 ENSGT00940000157349 #14 ENSGT00940000159754 #15 ENSGT00940000157698.b #16 ENSGT00940000156718 #17 ENSGT00940000159068 #18 ENSGT00940000158446 #19 ENSGT00510000047881 #20 ENSGT00950000182973.b.a #21 ENSGT00940000155568 #22 ENSGT00390000012935 #23 ENSGT00940000158287 #24 ENSGT00390000014757 #25 ENSGT00940000154234.b #26 ENSGT00930000151062 #27 ENSGT00940000160630 #28 ENSGT00390000007055 #30 ENSGT00940000154348.c.b.a #31 ENSGT00390000016223 #32 ENSGT00940000160394.a #33 ENSGT00390000007640.b #34 ENSGT00940000156152 #36 ENSGT00940000159848 #37 ENSGT00940000156124 ENSGT00940000158758 Bovidae ANCESTRAL SPECIES 6 ENSGT00940000154479.a ENSGT00390000017480 #8 ENSGT00940000158775 #9 ENSGT00390000014065 #10 ENSGT00940000158970 #11 ENSGT00390000016785 #12 ENSGT01020000230346.E #13 ENSGT00940000157349 #14 ENSGT00940000159754 #15 ENSGT00940000157698.b #16 ENSGT00940000156718 #17 ENSGT00940000159068 #18 ENSGT00940000158446 #19 ENSGT00510000047881 #20 ENSGT00950000182973.b.a #21 ENSGT00940000155568 #22 ENSGT00390000012935 #23 ENSGT00940000158287 #24 ENSGT00390000014757 #25 ENSGT00940000154234.b #26 ENSGT00930000151062 #27 ENSGT00940000160630 #28 ENSGT00390000007055 #30 ENSGT00940000154348.c.b.a #31 ENSGT00390000016223 #32 ENSGT00940000160394.a #33 ENSGT00390000007640.b #34 ENSGT00940000156152 #36 ENSGT00940000159848 #37 ENSGT00940000156124 ENSGT00940000158758 Caprinae ANCESTRAL SPECIES 6 ENSGT00940000154479.a ENSGT00390000017480 #8 ENSGT00940000158775 #9 ENSGT00390000014065 #10 ENSGT00940000158970 #11 ENSGT00390000016785 #12 ENSGT01020000230346.E #13 ENSGT00940000157349 #14 ENSGT00940000159754 #15 ENSGT00940000157698.b #16 ENSGT00940000156718 #17 ENSGT00940000159068 #18 ENSGT00940000158446 #19 ENSGT00510000047881 #20 ENSGT00950000182973.b.a #21 ENSGT00940000155568 #22 ENSGT00390000012935 #23 ENSGT00940000158287 #24 ENSGT00390000014757 #25 ENSGT00940000154234.b #26 ENSGT00930000151062 #27 ENSGT00940000160630 #28 ENSGT00390000007055 #30 ENSGT00940000154348.c.b.a #31 ENSGT00390000016223 #32 ENSGT00940000160394.a #33 ENSGT00390000007640.b #34 ENSGT00940000156152 #36 ENSGT00940000159848 #37 ENSGT00940000156124 ENSGT00940000158758 Goat MODERN SPECIES 6 FAM180B (ENSCHIG00000011395) NDUFS3 (ENSCHIG00000017760) #8 KBTBD4 (ENSCHIG00000016297) #9 PTPMT1 (ENSCHIG00000015788) #10 CELF1 (ENSCHIG00000024582) #11 RAPSN (ENSCHIG00000015950) #12 PSMC3 (ENSCHIG00000010249) #13 SLC39A13 (ENSCHIG00000018746) #14 SPI1 (ENSCHIG00000019747) #15 MYBPC3 (ENSCHIG00000021976) #16 MADD (ENSCHIG00000003140) #17 NR1H3 (ENSCHIG00000013751) #18 ACP2 (ENSCHIG00000017023) #19 DDB2 (ENSCHIG00000021645) #20 PACSIN3 (ENSCHIG00000007034) #21 ARFGAP2 (ENSCHIG00000003758) #22 CSTPP1 (ENSCHIG00000013768) #23 LRP4 (ENSCHIG00000024661) #24 CKAP5 (ENSCHIG00000018334) #25 ENSCHIG00000009743 F2 (ENSCHIG00000024270) #26 ZNF408 (ENSCHIG00000025346) #27 ARHGAP1 (ENSCHIG00000022137) #28 ATG13 (ENSCHIG00000014614) #30 HARBI1 (ENSCHIG00000014327) #31 AMBRA1 (ENSCHIG00000016854) #32 CHRM4 (ENSCHIG00000006372) #33 MDK (ENSCHIG00000020969) #34 DGKZ (ENSCHIG00000018020) #36 CREB3L1 (ENSCHIG00000008753) #37 PHF21A (ENSCHIG00000023760) Rambouillet Sheep MODERN SPECIES 6 FAM180B (ENSOARG00020014767) NDUFS3 (ENSOARG00020014698) #8 ENSOARG00020014554 #9 ENSOARG00020014495 #10 CELF1 (ENSOARG00020014203) #11 RAPSN (ENSOARG00020013803) #12 PSMC3 (ENSOARG00020013548) #13 SLC39A13 (ENSOARG00020013213) #14 SPI1 (ENSOARG00020013137) #15 MYBPC3 (ENSOARG00020012776) #16 MADD (ENSOARG00020011512) #17 NR1H3 (ENSOARG00020011361) #18 ACP2 (ENSOARG00020010726) #19 DDB2 (ENSOARG00020010497) #20 PACSIN3 (ENSOARG00020010393) #21 ARFGAP2 (ENSOARG00020010021) #22 CSTPP1 (ENSOARG00020023714) #23 LRP4 (ENSOARG00020023551) #24 CKAP5 (ENSOARG00020023388) #25 F2 (ENSOARG00020023298) #26 ZNF408 (ENSOARG00020023273) #27 ARHGAP1 (ENSOARG00020023238) #28 ATG13 (ENSOARG00020023093) #30 HARBI1 (ENSOARG00020023065) #31 AMBRA1 (ENSOARG00020022829) #32 CHRM4 (ENSOARG00020022796) #33 MDK (ENSOARG00020022725) #34 DGKZ (ENSOARG00020021820) #36 CREB3L1 (ENSOARG00020021730) #37 PHF21A (ENSOARG00020021567) LARGE2 (ENSOARG00020021424) Bovinae ANCESTRAL SPECIES 26 ENSGT00940000154479.a ENSGT00390000017480 #8 ENSGT00940000158775 #9 ENSGT00390000014065 #10 ENSGT00940000158970 #11 ENSGT00390000016785 #12 ENSGT01020000230346.E #13 ENSGT00940000157349 #14 ENSGT00940000159754 #15 ENSGT00940000157698.b #16 ENSGT00940000156718 #17 ENSGT00940000159068 #18 ENSGT00940000158446 #19 ENSGT00510000047881 #20 ENSGT00950000182973.b.a #21 ENSGT00940000155568 #22 ENSGT00390000012935 #23 ENSGT00940000158287 #24 ENSGT00390000014757 #25 ENSGT00940000154234.b #26 ENSGT00930000151062 #27 ENSGT00940000160630 #28 ENSGT00390000007055 #30 ENSGT00940000154348.c.b.a #31 ENSGT00390000016223 #32 ENSGT00940000160394.a #33 ENSGT00390000007640.b.d.a #34 ENSGT00940000156152 #36 ENSGT00940000159848 #37 ENSGT00940000156124 ENSGT00940000158758 Bos ANCESTRAL SPECIES 25 ENSGT00940000154479.a ENSGT00390000017480 #8 ENSGT00940000158775 #9 ENSGT00390000014065 #10 ENSGT00940000158970 #11 ENSGT00390000016785 #12 ENSGT01020000230346.E #13 ENSGT00940000157349 #14 ENSGT00940000159754 #15 ENSGT00940000157698.b #16 ENSGT00940000156718 #17 ENSGT00940000159068 #18 ENSGT00940000158446 #19 ENSGT00510000047881 #20 ENSGT00950000182973.b.a #21 ENSGT00940000155568 #22 ENSGT00390000012935 #23 ENSGT00940000158287 #24 ENSGT00390000014757 #25 ENSGT00940000154234.b #26 ENSGT00930000151062 #27 ENSGT00940000160630 #28 ENSGT00390000007055 #30 ENSGT00940000154348.c.b.a #31 ENSGT00390000016223 #32 ENSGT00940000160394.a #33 ENSGT00390000007640.b.d.a #34 ENSGT00940000156152 #36 ENSGT00940000159848 #37 ENSGT00940000156124 ENSGT00940000158758 Bos_a ANCESTRAL SPECIES 36 ENSGT00940000154479.a ENSGT00390000017480 #8 ENSGT00940000158775 #9 ENSGT00390000014065 #10 ENSGT00940000158970 #11 ENSGT00390000016785 #12 ENSGT01020000230346.E #13 ENSGT00940000157349 #14 ENSGT00940000159754 #15 ENSGT00940000157698.b #16 ENSGT00940000156718 #17 ENSGT00940000159068 #18 ENSGT00940000158446 #19 ENSGT00510000047881 #20 ENSGT00950000182973.b.a #21 ENSGT00940000155568 #22 ENSGT00390000012935 #23 ENSGT00940000158287 #24 ENSGT00390000014757 #25 ENSGT00940000154234.b #26 ENSGT00930000151062 #27 ENSGT00940000160630 #28 ENSGT00390000007055 #30 ENSGT00940000154348.c.b.a #31 ENSGT00940000155097.e.a ENSGT00390000016223 #32 ENSGT00940000160394.a #33 ENSGT00390000007640.b.d.a #34 ENSGT00940000156152 #36 ENSGT00940000159848 #37 ENSGT00940000156124 Wild yak MODERN SPECIES 1047 ENSBMUG00000024672 NDUFS3 (ENSBMUG00000024660) #8 KBTBD4 (ENSBMUG00000024643) #9 ENSBMUG00000024626 #10 CELF1 (ENSBMUG00000024594) #11 RAPSN (ENSBMUG00000024536) #12 PSMC3 (ENSBMUG00000024510) #13 SLC39A13 (ENSBMUG00000024475) #14 SPI1 (ENSBMUG00000024426) #15 MADD (ENSBMUG00000024292) #17 MYBPC3 (ENSBMUG00000023919) #16 NR1H3 (ENSBMUG00000023834) #18 ACP2 (ENSBMUG00000023770) #19 DDB2 (ENSBMUG00000023687) #20 PACSIN3 (ENSBMUG00000023616) #21 ARFGAP2 (ENSBMUG00000023585) #22 CSTPP1 (ENSBMUG00000023500) #23 LRP4 (ENSBMUG00000023473) #24 CKAP5 (ENSBMUG00000023430) #25 F2 (ENSBMUG00000023372) #26 ZNF408 (ENSBMUG00000023350) #27 ARHGAP1 (ENSBMUG00000023337) #28 ATG13 (ENSBMUG00000023285) #30 HARBI1 (ENSBMUG00000023163) #31 ENSBMUG00000023155 AMBRA1 (ENSBMUG00000023114) #32 CHRM4 (ENSBMUG00000022974) #33 ENSBMUG00000022959 #34 DGKZ (ENSBMUG00000022918) #36 CREB3L1 (ENSBMUG00000022860) #37 Domestic yak MODERN SPECIES 4 FAM180B (ENSBGRG00000019645) NDUFS3 (ENSBGRG00000019602) #8 KBTBD4 (ENSBGRG00000019526) #9 ENSBGRG00000019424 #10 CELF1 (ENSBGRG00000019052) #11 RAPSN (ENSBGRG00000018674) #12 PSMC3 (ENSBGRG00000018446) #13 SLC39A13 (ENSBGRG00000018326) #14 SPI1 (ENSBGRG00000018200) #15 MYBPC3 (ENSBGRG00000017872) #16 MADD (ENSBGRG00000017261) #17 NR1H3 (ENSBGRG00000016958) #18 ACP2 (ENSBGRG00000016478) #19 DDB2 (ENSBGRG00000016037) #20 PACSIN3 (ENSBGRG00000015878) #21 ARFGAP2 (ENSBGRG00000015155) #22 CSTPP1 (ENSBGRG00000014751) #23 LRP4 (ENSBGRG00000014275) #24 CKAP5 (ENSBGRG00000013953) #25 F2 (ENSBGRG00000013793) #26 ZNF408 (ENSBGRG00000013630) #27 ARHGAP1 (ENSBGRG00000013511) #28 ATG13 (ENSBGRG00000013263) #30 HARBI1 (ENSBGRG00000013222) #31 TAF9 (ENSBGRG00000013181) AMBRA1 (ENSBGRG00000012979) #32 CHRM4 (ENSBGRG00000012936) #33 ENSBGRG00000012888 #34 DGKZ (ENSBGRG00000011064) #36 CREB3L1 (ENSBGRG00000010789) #37 PHF21A (ENSBGRG00000010552) Bos_b ANCESTRAL SPECIES 12 ENSGT00940000154479.a ENSGT00390000017480 #8 ENSGT00940000158775 #9 ENSGT00390000014065 #10 ENSGT00940000158970 #11 ENSGT00390000016785 #12 ENSGT01020000230346.E #13 ENSGT00940000157349 #14 ENSGT00940000159754 #15 ENSGT00940000157698.b #16 ENSGT00940000156718 #17 ENSGT00940000159068 #18 ENSGT00940000158446 #19 ENSGT00510000047881 #20 ENSGT00950000182973.b.a #21 ENSGT00940000155568 #22 ENSGT00390000012935 #23 ENSGT00940000158287 #24 ENSGT00390000014757 #25 ENSGT00940000154234.b #26 ENSGT00930000151062 #27 ENSGT00940000160630 #28 ENSGT00390000007055 #30 ENSGT00940000154348.c.b.a #31 ENSGT00390000016223 #32 ENSGT00940000160394.a #33 ENSGT00390000007640.b.d.a #34 ENSGT00940000156152 #36 ENSGT00940000159848 #37 ENSGT00940000156124 ENSGT00940000158758 Cow MODERN SPECIES 6 FAM180B (ENSBTAG00000055123) NDUFS3 (ENSBTAG00000018483) #8 KBTBD4 (ENSBTAG00000018482) #9 PTPMT1 (ENSBTAG00000018479) #10 CELF1 (ENSBTAG00000002520) #11 RAPSN (ENSBTAG00000021745) #12 PSMC3 (ENSBTAG00000021744) #13 SLC39A13 (ENSBTAG00000019436) #14 SPI1 (ENSBTAG00000021709) #15 MYBPC3 (ENSBTAG00000021707) #16 MADD (ENSBTAG00000021700) #17 NR1H3 (ENSBTAG00000010681) #18 ACP2 (ENSBTAG00000021002) #19 DDB2 (ENSBTAG00000020999) #20 PACSIN3 (ENSBTAG00000009576) #21 ARFGAP2 (ENSBTAG00000009574) #22 CSTPP1 (ENSBTAG00000009573) #23 LRP4 (ENSBTAG00000008429) #24 CKAP5 (ENSBTAG00000004448) #25 F2 (ENSBTAG00000007148) #26 ZNF408 (ENSBTAG00000027557) #27 ARHGAP1 (ENSBTAG00000016501) #28 ATG13 (ENSBTAG00000017325) #30 HARBI1 (ENSBTAG00000004639) #31 AMBRA1 (ENSBTAG00000004282) #32 CHRM4 (ENSBTAG00000033699) #33 MDK (ENSBTAG00000007740) #34 DGKZ (ENSBTAG00000013636) #36 CREB3L1 (ENSBTAG00000006143) #37 PHF21A (ENSBTAG00000009611) LARGE2 (ENSBTAG00000009607) Hybrid Bos Indicus MODERN SPECIES 6 ENSBIXG00005020389 #7 FAM180B (ENSBIXG00005020374) KBTBD4 (ENSBIXG00005020354) #9 PTPMT1 (ENSBIXG00005007208) #10 CELF1 (ENSBIXG00005020290) #11 RAPSN (ENSBIXG00005003352) #12 PSMC3 (ENSBIXG00005020171) #13 SLC39A13 (ENSBIXG00005003304) #14 SPI1 (ENSBIXG00005020034) #15 MYBPC3 (ENSBIXG00005002636) #16 MADD (ENSBIXG00005003241) #17 NR1H3 (ENSBIXG00005019630) #18 ACP2 (ENSBIXG00005019552) #19 DDB2 (ENSBIXG00005019438) #20 PACSIN3 (ENSBIXG00005019375) #21 ARFGAP2 (ENSBIXG00005019318) #22 CSTPP1 (ENSBIXG00005019202) #23 LRP4 (ENSBIXG00005019152) #24 CKAP5 (ENSBIXG00005018988) #25 F2 (ENSBIXG00005018882) #26 ZNF408 (ENSBIXG00005018816) #27 ARHGAP1 (ENSBIXG00005003058) #28 ATG13 (ENSBIXG00005003045) #30 HARBI1 (ENSBIXG00005018637) #31 AMBRA1 (ENSBIXG00005007656) #32 CHRM4 (ENSBIXG00005018467) #33 ENSBIXG00005018454 #34 DGKZ (ENSBIXG00005018295) #36 CREB3L1 (ENSBIXG00005002939) #37 PHF21A (ENSBIXG00005018097) LARGE2 (ENSBIXG00005018050) American bison MODERN SPECIES 3100 FAM180B (ENSBBBG00000002312) NDUFS3 (ENSBBBG00000012284) #8 KBTBD4 (ENSBBBG00000012295) #9 PTPMT1 (ENSBBBG00000001931) #10 CELF1 (ENSBBBG00000012337) #11 RAPSN (ENSBBBG00000002335) #12 PSMC3 (ENSBBBG00000002347) #13 SLC39A13 (ENSBBBG00000002358) #14 ENSBBBG00000012398 MYBPC3 (ENSBBBG00000012763) #16 MADD (ENSBBBG00000013202) #17 NR1H3 (ENSBBBG00000013293) #18 ACP2 (ENSBBBG00000001605) #19 DDB2 (ENSBBBG00000007213) #20 PACSIN3 (ENSBBBG00000013420) #21 ARFGAP2 (ENSBBBG00000013487) #22 CSTPP1 (ENSBBBG00000013522) #23 LRP4 (ENSBBBG00000007215) #24 CKAP5 (ENSBBBG00000002889) #25 F2 (ENSBBBG00000002915) #26 ZNF408 (ENSBBBG00000013728) #27 ARHGAP1 (ENSBBBG00000013736) #28 ATG13 (ENSBBBG00000002985) #30 HARBI1 (ENSBBBG00000013882) #31 AMBRA1 (ENSBBBG00000014063) #32 CHRM4 (ENSBBBG00000014075) #33 ENSBBBG00000014102 #34 ENSBBBG00000003163 #36 CREB3L1 (ENSBBBG00000003171) #37 PHF21A (ENSBBBG00000003187) LARGE2 (ENSBBBG00000014161) Siberian musk deer MODERN SPECIES 118 KBTBD4 (ENSMMSG00000002638) #9 PTPMT1 (ENSMMSG00000002650) #10 CELF1 (ENSMMSG00000005936) #11 ENSMMSG00000006034 RAPSN (ENSMMSG00000006063) #12 PSMC3 (ENSMMSG00000006116) #13 SLC39A13 (ENSMMSG00000006163) #14 SPI1 (ENSMMSG00000006220) #15 MYBPC3 (ENSMMSG00000006254) #16 MADD (ENSMMSG00000006433) #17 NR1H3 (ENSMMSG00000006800) #18 ACP2 (ENSMMSG00000006877) #19 DDB2 (ENSMMSG00000007023) #20 ENSMMSG00000007128 PACSIN3 (ENSMMSG00000007142) #21 ARFGAP2 (ENSMMSG00000007196) #22 CSTPP1 (ENSMMSG00000007479) #23 LRP4 (ENSMMSG00000007545) #24 CKAP5 (ENSMMSG00000007823) #25 F2 (ENSMMSG00000008000) #26 ZNF408 (ENSMMSG00000008033) #27 ARHGAP1 (ENSMMSG00000008062) #28 ATG13 (ENSMMSG00000008155) #30 HARBI1 (ENSMMSG00000008321) #31 AMBRA1 (ENSMMSG00000008353) #32 CHRM4 (ENSMMSG00000008482) #33 MDK (ENSMMSG00000008497) #34 DGKZ (ENSMMSG00000008653) #36 CREB3L1 (ENSMMSG00000009753) #37 PHF21A (ENSMMSG00000009796) LARGE2 (ENSMMSG00000009888) Yarkand deer MODERN SPECIES FAM180B (ENSCHYG00000003417) NDUFS3 (ENSCHYG00000003399) #8 KBTBD4 (ENSCHYG00000003377) #9 PTPMT1 (ENSCHYG00000003361) #10 ENSCHYG00000003356 CELF1 (ENSCHYG00000003333) #11 RAPSN (ENSCHYG00000003218) #12 PSMC3 (ENSCHYG00000003185) #13 SLC39A13 (ENSCHYG00000003145) #14 SPI1 (ENSCHYG00000003123) #15 MADD (ENSCHYG00000002609) #17 NR1H3 (ENSCHYG00000002538) #18 ACP2 (ENSCHYG00000002437) #19 DDB2 (ENSCHYG00000002377) #20 PACSIN3 (ENSCHYG00000002328) #21 ARFGAP2 (ENSCHYG00000002254) #22 CSTPP1 (ENSCHYG00000002208) #23 LRP4 (ENSCHYG00000002074) #24 CKAP5 (ENSCHYG00000001967) #25 F2 (ENSCHYG00000001885) #26 ZNF408 (ENSCHYG00000001850) #27 ARHGAP1 (ENSCHYG00000001791) #28 ATG13 (ENSCHYG00000001705) #30 HARBI1 (ENSCHYG00000001684) #31 AMBRA1 (ENSCHYG00000001540) #32 CHRM4 (ENSCHYG00000001502) #33 MDK (ENSCHYG00000001474) #34 DGKZ (ENSCHYG00000001154) #36 CREB3L1 (ENSCHYG00000001030) #37 PHF21A (ENSCHYG00000000954) LARGE2 (ENSCHYG00000000920) Cetacea ANCESTRAL SPECIES 4 ENSGT00940000154479.a ENSGT00390000017480 #8 ENSGT00940000158775 #9 ENSGT00390000014065 #10 ENSGT00940000158970 #11 ENSGT00390000016785 #12 ENSGT01020000230346.E #13 ENSGT00940000157349 #14 ENSGT00940000159754 #15 ENSGT00940000157698.b #16 ENSGT00940000156718 #17 ENSGT00940000159068 #18 ENSGT00940000158446 #19 ENSGT00510000047881 #20 ENSGT00950000182973.b.a #21 ENSGT00940000155568 #22 ENSGT00390000012935 #23 ENSGT00940000158287 #24 ENSGT00390000014757 #25 ENSGT00940000154234.b #26 ENSGT00930000151062 #27 ENSGT00940000160630 #28 ENSGT00390000007055 #30 ENSGT00940000154348.c.b.a #31 ENSGT00390000016223 #32 ENSGT00940000160394.a #33 ENSGT00390000007640.b #34 ENSGT00940000156152 #36 ENSGT00940000159848 #37 ENSGT00940000156124 ENSGT00940000158758 Blue whale MODERN SPECIES 19 FAM180B (ENSBMSG00010021998) NDUFS3 (ENSBMSG00010021996) #8 KBTBD4 (ENSBMSG00010021993) #9 PTPMT1 (ENSBMSG00010021990) #10 CELF1 (ENSBMSG00010021983) #11 RAPSN (ENSBMSG00010021975) #12 PSMC3 (ENSBMSG00010021968) #13 SLC39A13 (ENSBMSG00010021960) #14 SPI1 (ENSBMSG00010021953) #15 MYBPC3 (ENSBMSG00010021914) #16 MADD (ENSBMSG00010018497) #17 NR1H3 (ENSBMSG00010018229) #18 ACP2 (ENSBMSG00010018103) #19 DDB2 (ENSBMSG00010017897) #20 PACSIN3 (ENSBMSG00010017852) #21 ARFGAP2 (ENSBMSG00010017710) #22 CSTPP1 (ENSBMSG00010017644) #23 LRP4 (ENSBMSG00010017494) #24 CKAP5 (ENSBMSG00010017392) #25 F2 (ENSBMSG00010017325) #26 ZNF408 (ENSBMSG00010017299) #27 ENSBMSG00010017280 ARHGAP1 (ENSBMSG00010017220) #28 ATG13 (ENSBMSG00010017110) #30 HARBI1 (ENSBMSG00010017065) #31 AMBRA1 (ENSBMSG00010015727) #32 CHRM4 (ENSBMSG00010015622) #33 MDK (ENSBMSG00010015583) #34 DGKZ (ENSBMSG00010014872) #36 CREB3L1 (ENSBMSG00010014728) #37 PHF21A (ENSBMSG00010014561) Odontoceti ANCESTRAL SPECIES 4 ENSGT00940000154479.a ENSGT00390000017480 #8 ENSGT00940000158775 #9 ENSGT00390000014065 #10 ENSGT00940000158970 #11 ENSGT00390000016785 #12 ENSGT01020000230346.E #13 ENSGT00940000157349 #14 ENSGT00940000159754 #15 ENSGT00940000157698.b #16 ENSGT00940000156718 #17 ENSGT00940000159068 #18 ENSGT00940000158446 #19 ENSGT00510000047881 #20 ENSGT00950000182973.b.a #21 ENSGT00940000155568 #22 ENSGT00390000012935 #23 ENSGT00940000158287 #24 ENSGT00390000014757 #25 ENSGT00940000154234.b #26 ENSGT00930000151062 #27 ENSGT00940000160630 #28 ENSGT00390000007055 #30 ENSGT00940000154348.c.b.a #31 ENSGT00390000016223 #32 ENSGT00940000160394.a #33 ENSGT00390000007640.b #34 ENSGT00940000156152 #36 ENSGT00940000159848 #37 ENSGT00940000156124 ENSGT00940000158758 Sperm whale MODERN SPECIES 199 ACP2 (ENSPCTG00005021825) #19 DDB2 (ENSPCTG00005021776) #20 PACSIN3 (ENSPCTG00005021733) #21 ARFGAP2 (ENSPCTG00005021635) #22 CUNH11orf49 (ENSPCTG00005021607) #23 Odontoceti_a ANCESTRAL SPECIES 4 ENSGT00940000154479.a ENSGT00390000017480 #8 ENSGT00940000158775 #9 ENSGT00390000014065 #10 ENSGT00940000158970 #11 ENSGT00390000016785 #12 ENSGT01020000230346.E #13 ENSGT00940000157349 #14 ENSGT00940000159754 #15 ENSGT00940000157698.b #16 ENSGT00940000156718 #17 ENSGT00940000159068 #18 ENSGT00940000158446 #19 ENSGT00510000047881 #20 ENSGT00950000182973.b.a #21 ENSGT00940000155568 #22 ENSGT00390000012935 #23 ENSGT00940000158287 #24 ENSGT00390000014757 #25 ENSGT00940000154234.b #26 ENSGT00930000151062 #27 ENSGT00940000160630 #28 ENSGT00390000007055 #30 ENSGT00940000154348.c.b.a #31 ENSGT00390000016223 #32 ENSGT00940000160394.a #33 ENSGT00390000007640.b #34 ENSGT00940000156152 #36 ENSGT00940000159848 #37 ENSGT00940000156124 ENSGT00940000158758 Dolphin MODERN SPECIES 2041 FAM180B (ENSTTRG00000014167) NDUFS3 (ENSTTRG00000014164) #8 KBTBD4 (ENSTTRG00000014159) #9 ENSTTRG00000014158 CELF1 (ENSTTRG00000014157) #11 RAPSN (ENSTTRG00000014156) #12 PSMC3 (ENSTTRG00000014155) #13 SLC39A13 (ENSTTRG00000014154) #14 SPI1 (ENSTTRG00000014153) #15 MYBPC3 (ENSTTRG00000014152) #16 MADD (ENSTTRG00000014150) #17 NR1H3 (ENSTTRG00000014149) #18 ACP2 (ENSTTRG00000014147) #19 DDB2 (ENSTTRG00000014146) #20 PACSIN3 (ENSTTRG00000014143) #21 ARFGAP2 (ENSTTRG00000014137) #22 CSTPP1 (ENSTTRG00000014133) #23 LRP4 (ENSTTRG00000014129) #24 CKAP5 (ENSTTRG00000014121) #25 Odontoceti_b ANCESTRAL SPECIES 4 ENSGT00940000154479.a ENSGT00390000017480 #8 ENSGT00940000158775 #9 ENSGT00390000014065 #10 ENSGT00940000158970 #11 ENSGT00390000016785 #12 ENSGT01020000230346.E #13 ENSGT00940000157349 #14 ENSGT00940000159754 #15 ENSGT00940000157698.b #16 ENSGT00940000156718 #17 ENSGT00940000159068 #18 ENSGT00940000158446 #19 ENSGT00510000047881 #20 ENSGT00950000182973.b.a #21 ENSGT00940000155568 #22 ENSGT00390000012935 #23 ENSGT00940000158287 #24 ENSGT00390000014757 #25 ENSGT00940000154234.b #26 ENSGT00930000151062 #27 ENSGT00940000160630 #28 ENSGT00390000007055 #30 ENSGT00940000154348.c.b.a #31 ENSGT00390000016223 #32 ENSGT00940000160394.a #33 ENSGT00390000007640.b #34 ENSGT00940000156152 #36 ENSGT00940000159848 #37 ENSGT00940000156124 ENSGT00940000158758 Vaquita MODERN SPECIES 19 FAM180B (ENSPSNG00000011919) NDUFS3 (ENSPSNG00000011780) #8 KBTBD4 (ENSPSNG00000011651) #9 PTPMT1 (ENSPSNG00000011591) #10 CELF1 (ENSPSNG00000011349) #11 RAPSN (ENSPSNG00000010989) #12 PSMC3 (ENSPSNG00000010889) #13 SLC39A13 (ENSPSNG00000010822) #14 SPI1 (ENSPSNG00000010691) #15 MYBPC3 (ENSPSNG00000009622) #16 MADD (ENSPSNG00000007281) #17 NR1H3 (ENSPSNG00000006534) #18 ACP2 (ENSPSNG00000006273) #19 DDB2 (ENSPSNG00000006057) #20 PACSIN3 (ENSPSNG00000006003) #21 ENSPSNG00000005975 #22 CSTPP1 (ENSPSNG00000005920) #23 LRP4 (ENSPSNG00000005781) #24 CKAP5 (ENSPSNG00000005667) #25 F2 (ENSPSNG00000005610) #26 ZNF408 (ENSPSNG00000005582) #27 ARHGAP1 (ENSPSNG00000005549) #28 ATG13 (ENSPSNG00000005490) #30 HARBI1 (ENSPSNG00000005453) #31 AMBRA1 (ENSPSNG00000005291) #32 CHRM4 (ENSPSNG00000005202) #33 MDK (ENSPSNG00000005164) #34 DGKZ (ENSPSNG00000004933) #36 CREB3L1 (ENSPSNG00000004707) #37 PHF21A (ENSPSNG00000004656) LARGE2 (ENSPSNG00000004402) Monodontidae ANCESTRAL SPECIES 2 ENSGT00940000154479.a ENSGT00390000017480 #8 ENSGT00940000158775 #9 ENSGT00390000014065 #10 ENSGT00940000158970 #11 ENSGT00390000016785 #12 ENSGT01020000230346.E #13 ENSGT00940000157349 #14 ENSGT00940000159754 #15 ENSGT00940000157698.b #16 ENSGT00940000156718 #17 ENSGT00940000159068 #18 ENSGT00940000158446 #19 ENSGT00510000047881 #20 ENSGT00950000182973.b.a #21 ENSGT00940000155568 #22 ENSGT00390000012935 #23 ENSGT00940000158287 #24 ENSGT00390000014757 #25 ENSGT00940000154234.b #26 ENSGT00930000151062 #27 ENSGT00940000160630 #28 ENSGT00390000007055 #30 ENSGT00940000154348.c.b.a #31 ENSGT00390000016223 #32 ENSGT00940000160394.a #33 ENSGT00390000007640.b #34 ENSGT00940000156152 #36 ENSGT00940000159848 #37 ENSGT00940000156124 ENSGT00940000158758 Narwhal MODERN SPECIES 314 FAM180B (ENSMMNG00015021863) NDUFS3 (ENSMMNG00015021859) #8 KBTBD4 (ENSMMNG00015021852) #9 PTPMT1 (ENSMMNG00015021844) #10 CELF1 (ENSMMNG00015021830) #11 RAPSN (ENSMMNG00015021818) #12 PSMC3 (ENSMMNG00015021802) #13 SLC39A13 (ENSMMNG00015021773) #14 SPI1 (ENSMMNG00015021760) #15 MYBPC3 (ENSMMNG00015021686) #16 MADD (ENSMMNG00015021102) #17 NR1H3 (ENSMMNG00015020682) #18 ACP2 (ENSMMNG00015020547) #19 DDB2 (ENSMMNG00015020426) #20 PACSIN3 (ENSMMNG00015020360) #21 ARFGAP2 (ENSMMNG00015020303) #22 CSTPP1 (ENSMMNG00015020243) #23 LRP4 (ENSMMNG00015020152) #24 CKAP5 (ENSMMNG00015019798) #25 F2 (ENSMMNG00015019642) #26 ZNF408 (ENSMMNG00015019610) #27 ARHGAP1 (ENSMMNG00015019583) #28 ATG13 (ENSMMNG00015019491) #30 HARBI1 (ENSMMNG00015019436) #31 AMBRA1 (ENSMMNG00015019294) #32 CHRM4 (ENSMMNG00015019208) #33 MDK (ENSMMNG00015019173) #34 DGKZ (ENSMMNG00015018868) #36 CREB3L1 (ENSMMNG00015018682) #37 PHF21A (ENSMMNG00015018555) LARGE2 (ENSMMNG00015018329) Beluga whale MODERN SPECIES 7 FAM180B (ENSDLEG00000000116) NDUFS3 (ENSDLEG00000000150) #8 KBTBD4 (ENSDLEG00000000205) #9 PTPMT1 (ENSDLEG00000000244) #10 CELF1 (ENSDLEG00000000264) #11 RAPSN (ENSDLEG00000000322) #12 PSMC3 (ENSDLEG00000000360) #13 SLC39A13 (ENSDLEG00000000405) #14 SPI1 (ENSDLEG00000000443) #15 MYBPC3 (ENSDLEG00000000811) #16 MADD (ENSDLEG00000003539) #17 NR1H3 (ENSDLEG00000013403) #18 ACP2 (ENSDLEG00000013563) #19 DDB2 (ENSDLEG00000014125) #20 PACSIN3 (ENSDLEG00000014213) #21 ARFGAP2 (ENSDLEG00000014461) #22 CSTPP1 (ENSDLEG00000016182) #23 LRP4 (ENSDLEG00000016355) #24 CKAP5 (ENSDLEG00000018239) #25 F2 (ENSDLEG00000018821) #26 ZNF408 (ENSDLEG00000018910) #27 ARHGAP1 (ENSDLEG00000018942) #28 ATG13 (ENSDLEG00000019150) #30 HARBI1 (ENSDLEG00000019555) #31 AMBRA1 (ENSDLEG00000019560) #32 CHRM4 (ENSDLEG00000019579) #33 MDK (ENSDLEG00000019582) #34 DGKZ (ENSDLEG00000019589) #36 CREB3L1 (ENSDLEG00000019610) #37 PHF21A (ENSDLEG00000019624) ENSDLEG00000019655 Eulipotyphla ANCESTRAL SPECIES 468 ENSGT00950000182973.b.a #21 ENSGT00940000155568 #22 ENSGT00390000012935 #23 Common shrew MODERN SPECIES 3478 PACSIN3 (ENSSARG00000004653) #21 ARFGAP2 (ENSSARG00000004594) #22 CSTPP1 (ENSSARG00000004578) #23 Hedgehog MODERN SPECIES 4526 ENSEEUG00000006071 #22 CSTPP1 (ENSEEUG00000006011) #23 Atlantogenata ANCESTRAL SPECIES 13 ENSGT00940000154479.a ENSGT00390000017480 #8 ENSGT00940000158775 #9 ENSGT00390000014065 #10 ENSGT00940000158970 #11 ENSGT00390000016785 #12 ENSGT01020000230346.E #13 ENSGT00940000157349 #14 ENSGT00940000159754 #15 ENSGT00940000157698.b #16 ENSGT00940000156718 #17 ENSGT00940000159068 #18 ENSGT00940000158446 #19 ENSGT00510000047881 #20 ENSGT00950000182973.b.a #21 ENSGT00940000155568 #22 ENSGT00390000012935 #23 ENSGT00940000158287 #24 ENSGT00390000014757 #25 ENSGT00940000154234.b #26 ENSGT00930000151062 #27 ENSGT00940000160630 #28 ENSGT00390000007055 #30 ENSGT00940000154348.c.b.a #31 ENSGT00390000016223 #32 ENSGT00940000160394.a #33 ENSGT00390000007640.b #34 ENSGT00940000156152 #36 ENSGT00940000159848 #37 ENSGT00940000156124 ENSGT00940000158758 Afrotheria ANCESTRAL SPECIES 16 ENSGT00940000154479.a ENSGT00390000017480 #8 ENSGT00940000158775 #9 ENSGT00390000014065 #10 ENSGT00940000158970 #11 ENSGT00390000016785 #12 ENSGT01020000230346.E #13 ENSGT00940000157349 #14 ENSGT00940000159754 #15 ENSGT00940000157698.b #16 ENSGT00940000156718 #17 ENSGT00940000159068 #18 ENSGT00940000158446 #19 ENSGT00510000047881 #20 ENSGT00950000182973.b.a #21 ENSGT00940000155568 #22 ENSGT00390000012935 #23 ENSGT00940000158287 #24 ENSGT00390000014757 #25 ENSGT00940000154234.b #26 ENSGT00930000151062 #27 ENSGT00940000160630 #28 ENSGT00390000007055 #30 ENSGT00940000154348.c.b.a #31 ENSGT00390000016223 #32 ENSGT00940000160394.a #33 ENSGT00390000007640.b #34 ENSGT00940000156152 #36 ENSGT00940000159848 #37 ENSGT00940000156124 ENSGT00940000158758 Afrotheria_a ANCESTRAL SPECIES 17 ENSGT00940000161832.a #7 ENSGT00390000017480 #8 ENSGT00940000158775 #9 ENSGT00390000014065 #10 ENSGT00940000158970 #11 ENSGT00390000016785 #12 ENSGT01020000230346.E #13 ENSGT00940000157349 #14 ENSGT00940000159754 #15 ENSGT00940000157698.b #16 ENSGT00940000156718 #17 ENSGT00940000159068 #18 ENSGT00940000158446 #19 ENSGT00510000047881 #20 ENSGT00950000182973.b.a #21 ENSGT00940000155568 #22 ENSGT00390000012935 #23 ENSGT00940000158287 #24 ENSGT00390000014757 #25 ENSGT00940000154234.b #26 ENSGT00930000151062 #27 ENSGT00940000160630 #28 ENSGT00390000007055 #30 ENSGT00940000154348.c.b.a #31 ENSGT00390000016223 #32 ENSGT00940000160394.a #33 ENSGT00390000007640.b #34 ENSGT00940000156152 #36 ENSGT00940000159848 #37 ENSGT00940000156124 ENSGT00940000158758 Elephant MODERN SPECIES 209 C1QTNF4 (ENSLAFG00000017947) #7 NDUFS3 (ENSLAFG00000017939) #8 KBTBD4 (ENSLAFG00000017937) #9 PTPMT1 (ENSLAFG00000020874) #10 CELF1 (ENSLAFG00000003484) #11 RAPSN (ENSLAFG00000016010) #12 PSMC3 (ENSLAFG00000032142) #13 SLC39A13 (ENSLAFG00000015999) #14 SPI1 (ENSLAFG00000004062) #15 MYBPC3 (ENSLAFG00000031033) #16 MADD (ENSLAFG00000009270) #17 NR1H3 (ENSLAFG00000009267) #18 ACP2 (ENSLAFG00000025658) #19 DDB2 (ENSLAFG00000009262) #20 PACSIN3 (ENSLAFG00000016193) #21 ARFGAP2 (ENSLAFG00000013742) #22 CSTPP1 (ENSLAFG00000013736) #23 LRP4 (ENSLAFG00000013726) #24 CKAP5 (ENSLAFG00000010386) #25 F2 (ENSLAFG00000010383) #26 ZNF408 (ENSLAFG00000027848) #27 ARHGAP1 (ENSLAFG00000015141) #28 ATG13 (ENSLAFG00000015138) #30 HARBI1 (ENSLAFG00000032359) #31 ENSLAFG00000015123 #32 ENSLAFG00000030479 #32 CHRM4 (ENSLAFG00000026552) #33 MDK (ENSLAFG00000015119) #34 DGKZ (ENSLAFG00000015107) #36 CREB3L1 (ENSLAFG00000005092) #37 PHF21A (ENSLAFG00000003576) Hyrax MODERN SPECIES 3657 SPI1 (ENSPCAG00000016572) #15 MYBPC3 (ENSPCAG00000016433) #16 MADD (ENSPCAG00000016258) #17 NR1H3 (ENSPCAG00000016194) #18 ACP2 (ENSPCAG00000016140) #19 DDB2 (ENSPCAG00000016073) #20 PACSIN3 (ENSPCAG00000015992) #21 ARFGAP2 (ENSPCAG00000015888) #22 CSTPP1 (ENSPCAG00000015812) #23 Tenrec MODERN SPECIES 4380 ARFGAP2 (ENSETEG00000003757) #22 CSTPP1 (ENSETEG00000003750) #23 Xenarthra ANCESTRAL SPECIES 19 ENSGT00940000161832.a #7 ENSGT00940000154479.a ENSGT00390000017480 #8 ENSGT00940000158775 #9 ENSGT00390000014065 #10 ENSGT00940000158970 #11 ENSGT00390000016785 #12 ENSGT01020000230346.E #13 ENSGT00940000157349 #14 ENSGT00940000159754 #15 ENSGT00940000157698.b #16 ENSGT00940000156718 #17 ENSGT00940000159068 #18 ENSGT00940000158446 #19 ENSGT00950000182973.b.a #21 ENSGT00940000155568 #22 ENSGT00390000012935 #23 ENSGT00940000158287 #24 ENSGT00390000014757 #25 ENSGT00940000154234.b #26 ENSGT00930000151062 #27 ENSGT00940000160630 #28 ENSGT00390000007055 #30 ENSGT00940000154348.c.b.a #31 ENSGT00390000016223 #32 ENSGT00940000160394.a #33 ENSGT00390000007640.b #34 ENSGT00940000156152 #36 ENSGT00940000159848 #37 ENSGT00940000156124 ENSGT00940000158758 Sloth MODERN SPECIES 3996 ARFGAP2 (ENSCHOG00000002572) #22 CSTPP1 (ENSCHOG00000002563) #23 Armadillo DUPLICATION Armadillo MODERN SPECIES 4414 ENSDNOG00000045809 #22 PITX2 (ENSDNOG00000045602) Armadillo MODERN SPECIES 1506 C1QTNF4 (ENSDNOG00000041468) #7 FAM180B (ENSDNOG00000009566) NDUFS3 (ENSDNOG00000009548) #8 KBTBD4 (ENSDNOG00000009543) #9 ENSDNOG00000025849 #10 CELF1 (ENSDNOG00000009523) #11 RAPSN (ENSDNOG00000040969) #12 PSMC3 (ENSDNOG00000033470) #13 SLC39A13 (ENSDNOG00000018463) #14 SPI1 (ENSDNOG00000041462) #15 MYBPC3 (ENSDNOG00000042129) #16 MADD (ENSDNOG00000011229) #17 NR1H3 (ENSDNOG00000011206) #18 ACP2 (ENSDNOG00000044310) #19 PACSIN3 (ENSDNOG00000030783) #21 ENSDNOG00000019820 #22 ENSDNOG00000038982 CSTPP1 (ENSDNOG00000019818) #23 LRP4 (ENSDNOG00000019816) #24 CKAP5 (ENSDNOG00000012007) #25 F2 (ENSDNOG00000012528) #26 ZNF408 (ENSDNOG00000047669) #27 ARHGAP1 (ENSDNOG00000017314) #28 ATG13 (ENSDNOG00000002084) #30 HARBI1 (ENSDNOG00000002083) #31 ENSDNOG00000049497 AMBRA1 (ENSDNOG00000049694) #32 CHRM4 (ENSDNOG00000043079) #33 ENSDNOG00000037925 #34 DGKZ (ENSDNOG00000024292) #36 CREB3L1 (ENSDNOG00000010500) #37 Marsupialia ANCESTRAL SPECIES 7 ENSGT00940000154479.a ENSGT00390000017480 #8 ENSGT00940000158775 #9 ENSGT00390000014065 #10 ENSGT00940000158970 #11 ENSGT00390000016785 #12 ENSGT01020000230346.E.w.a #13 ENSGT00940000157349 #14 ENSGT00940000159754 #15 ENSGT00940000157698.b #16 ENSGT00940000156718 #17 ENSGT00940000159068 #18 ENSGT00940000158446 #19 ENSGT00510000047881 #20 ENSGT00950000182973.b.a #21 ENSGT00940000155568 #22 ENSGT00390000012935 #23 ENSGT00940000158287 #24 ENSGT00390000014757 #25 ENSGT00940000164059 ENSGT00930000151062 #27 ENSGT00940000160630 #28 ENSGT00390000007055 #30 ENSGT00940000154348.c.b.a #31 ENSGT00390000016223 #32 ENSGT00940000160394.a #33 ENSGT00390000007640.b #34 ENSGT00940000156152 #36 ENSGT00940000159848 #37 ENSGT00940000156124 ENSGT00940000158758 Opossum MODERN SPECIES 4 ENSMODG00000024428 ENSMODG00000019916 #8 KBTBD4 (ENSMODG00000019915) #9 ENSMODG00000019914 #10 CELF1 (ENSMODG00000019913) #11 RAPSN (ENSMODG00000041760) #12 ENSMODG00000019911 #13 SLC39A13 (ENSMODG00000019910) #14 SPI1 (ENSMODG00000019909) #15 MYBPC3 (ENSMODG00000019908) #16 MADD (ENSMODG00000019907) #17 NR1H3 (ENSMODG00000019906) #18 ACP2 (ENSMODG00000019905) #19 ENSMODG00000019904 #20 PACSIN3 (ENSMODG00000019903) #21 ARFGAP2 (ENSMODG00000019901) #22 CSTPP1 (ENSMODG00000019899) #23 ENSMODG00000019900 LRP4 (ENSMODG00000019898) #24 CKAP5 (ENSMODG00000019897) #25 ENSMODG00000019896 ZNF408 (ENSMODG00000019895) #27 ARHGAP1 (ENSMODG00000019894) #28 ATG13 (ENSMODG00000019893) #30 HARBI1 (ENSMODG00000019892) #31 AMBRA1 (ENSMODG00000019891) #32 CHRM4 (ENSMODG00000019889) #33 CREB3L1 (ENSMODG00000019888) #37 ENSMODG00000046087 PHF21A (ENSMODG00000019887) LARGE2 (ENSMODG00000019885) Marsupialia_b ANCESTRAL SPECIES 8 ENSGT00940000154479.a ENSGT00390000017480 #8 ENSGT00940000158775 #9 ENSGT00390000014065 #10 ENSGT00940000158970 #11 ENSGT00390000016785 #12 ENSGT01020000230346.E.w.a #13 ENSGT00940000157349 #14 ENSGT00940000159754 #15 ENSGT00940000157698.b #16 ENSGT00940000156718 #17 ENSGT00940000159068 #18 ENSGT00940000158446 #19 ENSGT00510000047881 #20 ENSGT00950000182973.b.a #21 ENSGT00940000155568 #22 ENSGT00390000012935 #23 ENSGT00940000158287 #24 ENSGT00390000014757 #25 ENSGT00940000164059 ENSGT00940000160630 #28 ENSGT00390000007055 #30 ENSGT00940000154348.c.b.a #31 ENSGT00390000016223 #32 ENSGT00940000160394.a #33 ENSGT00390000007640.b #34 ENSGT00940000156152 #36 ENSGT00940000159848 #37 ENSGT00940000156124 ENSGT00940000158758 ENSGT00390000017790 Tasmanian devil MODERN SPECIES 5 ENSSHAG00000026627 NDUFS3 (ENSSHAG00000025275) #8 KBTBD4 (ENSSHAG00000021528) #9 ENSSHAG00000024403 #10 CELF1 (ENSSHAG00000017438) #11 RAPSN (ENSSHAG00000017408) #12 PSMC3 (ENSSHAG00000017393) #13 SLC39A13 (ENSSHAG00000017377) #14 SPI1 (ENSSHAG00000017291) #15 MYBPC3 (ENSSHAG00000017252) #16 NR1H3 (ENSSHAG00000017152) #18 MADD (ENSSHAG00000017189) #17 ACP2 (ENSSHAG00000017126) #19 DDB2 (ENSSHAG00000017108) #20 PACSIN3 (ENSSHAG00000017065) #21 ENSSHAG00000023512 #22 CSTPP1 (ENSSHAG00000032264) #23 LRP4 (ENSSHAG00000016580) #24 CKAP5 (ENSSHAG00000016386) #25 ENSSHAG00000016366 ARHGAP1 (ENSSHAG00000016324) #28 HARBI1 (ENSSHAG00000016218) #31 ATG13 (ENSSHAG00000016284) #30 AMBRA1 (ENSSHAG00000015742) #32 ENSSHAG00000030675 #33 DGKZ (ENSSHAG00000026033) #36 CREB3L1 (ENSSHAG00000015230) #37 PHF21A (ENSSHAG00000014057) LARGE2 (ENSSHAG00000022457) PEX16 (ENSSHAG00000031730) CRY2 (ENSSHAG00000025020) Diprotodontia ANCESTRAL SPECIES 46 ENSGT00940000154479.a ENSGT00390000017480 #8 ENSGT00940000158775 #9 ENSGT00390000014065 #10 ENSGT00940000158970 #11 ENSGT00390000016785 #12 ENSGT01020000230346.E.w.a #13 ENSGT00940000157349 #14 ENSGT00940000159754 #15 ENSGT00940000157698.b #16 ENSGT00940000156718 #17 ENSGT00940000159068 #18 ENSGT00940000158446 #19 ENSGT00510000047881 #20 ENSGT00950000182973.b.a #21 ENSGT00940000155568 #22 ENSGT00390000012935 #23 ENSGT00940000158287 #24 ENSGT00390000014757 #25 ENSGT00940000164059 ENSGT00940000160630 #28 ENSGT00390000007055 #30 ENSGT00940000154348.c.b.a #31 ENSGT00390000016223 #32 ENSGT00940000160394.a #33 ENSGT00390000007640.b #34 ENSGT00940000156152 #36 ENSGT00940000159848 #37 ENSGT00940000156124 ENSGT00940000158758 ENSGT00390000017790 Diprotodontia_a ANCESTRAL SPECIES 46 ENSGT00940000154479.a ENSGT00390000017480 #8 ENSGT00940000158775 #9 ENSGT00390000014065 #10 ENSGT00940000158970 #11 ENSGT00390000016785 #12 ENSGT01020000230346.E.w.a #13 ENSGT00940000157349 #14 ENSGT00940000159754 #15 ENSGT00940000157698.b #16 ENSGT00940000156718 #17 ENSGT00940000159068 #18 ENSGT00940000158446 #19 ENSGT00510000047881 #20 ENSGT00950000182973.b.a #21 ENSGT00940000155568 #22 ENSGT00390000012935 #23 ENSGT00940000158287 #24 ENSGT00390000014757 #25 ENSGT00940000164059 ENSGT00940000160630 #28 ENSGT00390000007055 #30 ENSGT00940000154348.c.b.a #31 ENSGT00390000016223 #32 ENSGT00940000160394.a #33 ENSGT00390000007640.b #34 ENSGT00940000156152 #36 ENSGT00940000159848 #37 ENSGT00940000156124 ENSGT00940000158758 ENSGT00390000017790 koala MODERN SPECIES 139 ENSPCIG00000037012 NDUFS3 (ENSPCIG00000016526) #8 KBTBD4 (ENSPCIG00000016600) #9 ENSPCIG00000016602 #10 CELF1 (ENSPCIG00000022947) #11 RAPSN (ENSPCIG00000022952) #12 PSMC3 (ENSPCIG00000007254) #13 SLC39A13 (ENSPCIG00000007257) #14 SPI1 (ENSPCIG00000007258) #15 MYBPC3 (ENSPCIG00000007264) #16 MADD (ENSPCIG00000007278) #17 NR1H3 (ENSPCIG00000007281) #18 ACP2 (ENSPCIG00000007284) #19 DDB2 (ENSPCIG00000007289) #20 PACSIN3 (ENSPCIG00000007325) #21 ARFGAP2 (ENSPCIG00000007326) #22 CSTPP1 (ENSPCIG00000007328) #23 LRP4 (ENSPCIG00000007330) #24 CKAP5 (ENSPCIG00000007436) #25 ENSPCIG00000020069 ARHGAP1 (ENSPCIG00000020071) #28 ATG13 (ENSPCIG00000020075) #30 HARBI1 (ENSPCIG00000020090) #31 AMBRA1 (ENSPCIG00000020093) #32 CHRM4 (ENSPCIG00000020098) #33 MDK (ENSPCIG00000020100) #34 DGKZ (ENSPCIG00000020101) #36 CREB3L1 (ENSPCIG00000020114) #37 PHF21A (ENSPCIG00000020119) LARGE2 (ENSPCIG00000020123) PEX16 (ENSPCIG00000020128) Common wonbat MODERN SPECIES 1058 ENSVURG00010009751 NDUFS3 (ENSVURG00010009759) #8 KBTBD4 (ENSVURG00010009776) #9 ENSVURG00010009789 #10 CELF1 (ENSVURG00010009795) #11 RAPSN (ENSVURG00010009821) #12 ENSVURG00010009856 #13 SLC39A13 (ENSVURG00010009882) #14 SPI1 (ENSVURG00010009914) #15 MYBPC3 (ENSVURG00010009939) #16 MADD (ENSVURG00010010013) #17 NR1H3 (ENSVURG00010010094) #18 ACP2 (ENSVURG00010010120) #19 DDB2 (ENSVURG00010010162) #20 PACSIN3 (ENSVURG00010010192) #21 ARFGAP2 (ENSVURG00010010235) #22 CSTPP1 (ENSVURG00010010291) #23 LRP4 (ENSVURG00010010304) #24 CKAP5 (ENSVURG00010010351) #25 ARHGAP1 (ENSVURG00010010440) #28 ATG13 (ENSVURG00010010461) #30 HARBI1 (ENSVURG00010010503) #31 AMBRA1 (ENSVURG00010010523) #32 CHRM4 (ENSVURG00010010600) #33 MDK (ENSVURG00010010613) #34 DGKZ (ENSVURG00010010658) #36 CREB3L1 (ENSVURG00010010813) #37 PHF21A (ENSVURG00010010860) LARGE2 (ENSVURG00010010886) PEX16 (ENSVURG00010010942) MAPK8IP1 (ENSVURG00010010986) Wallaby MODERN SPECIES 11979 ARFGAP2 (ENSMEUG00000004984) #22 Platypus MODERN SPECIES 14 ENSOANG00000007902 #7 NDUFS3 (ENSOANG00000007900) #8 KBTBD4 (ENSOANG00000007899) #9 ENSOANG00000050504 #10 CELF1 (ENSOANG00000007896) #11 RAPSN (ENSOANG00000007894) #12 PSMC3 (ENSOANG00000040187) #13 SLC39A13 (ENSOANG00000007890) #14 SPI1 (ENSOANG00000050063) #15 MYBPC3 (ENSOANG00000007889) #16 MADD (ENSOANG00000007884) #17 NR1H3 (ENSOANG00000006250) #18 ACP2 (ENSOANG00000048933) #19 DDB2 (ENSOANG00000006247) #20 PACSIN3 (ENSOANG00000004082) #21 ARFGAP2 (ENSOANG00000004083) #22 CSTPP1 (ENSOANG00000031094) #23 LRP4 (ENSOANG00000001954) #24 CKAP5 (ENSOANG00000002765) #25 ENSOANG00000002767 ARHGAP1 (ENSOANG00000002770) #28 ATG13 (ENSOANG00000006550) #30 HARBI1 (ENSOANG00000004814) #31 AMBRA1 (ENSOANG00000014521) #32 CHRM4 (ENSOANG00000045540) #33 MDK (ENSOANG00000037361) #34 DGKZ (ENSOANG00000003635) #36 CREB3L1 (ENSOANG00000005356) #37 PHF21A (ENSOANG00000005355) LARGE2 (ENSOANG00000005352) PEX16 (ENSOANG00000002458) Sauria ANCESTRAL SPECIES 3 ENSGT00940000158775 #9 ENSGT00390000014065 #10 ENSGT00940000158970 #11 ENSGT00390000016785 #12 ENSGT01020000230346.E #13 ENSGT00390000015299.a.b.a ENSGT00940000157349 #14 ENSGT00940000159754 #15 ENSGT00940000157698.b #16 ENSGT00940000156718 #17 ENSGT00940000159068 #18 ENSGT00940000158446 #19 ENSGT00510000047881 #20 ENSGT00950000182973.b.a #21 ENSGT01030000235152.a ENSGT00940000155568 #22 ENSGT00390000012935 #23 ENSGT00960000189374 ENSGT00940000158287 #24 ENSGT00390000014757.g #25 ENSGT00940000164059 ENSGT00930000151062 #27 ENSGT00940000160630 #28 ENSGT00390000007055 #30 ENSGT00940000154348.c.b.a #31 ENSGT00390000016223 #32 ENSGT00940000160394.a #33 ENSGT00390000007640.b #34 ENSGT00940000156152 #36 ENSGT00940000159848 #37 ENSGT00940000156124 Archelosauria ANCESTRAL SPECIES 2 ENSGT00390000014065 #10 ENSGT00940000158970 #11 ENSGT00390000016785 #12 ENSGT01020000230346.E #13 ENSGT00390000015299.a.b.a ENSGT00940000157349 #14 ENSGT00940000159754 #15 ENSGT00940000157698.b #16 ENSGT00940000156718 #17 ENSGT00940000159068 #18 ENSGT00940000158446 #19 ENSGT00510000047881 #20 ENSGT00950000182973.b.a #21 ENSGT00940000161474.b.b ENSGT01030000235152.a ENSGT00940000155568 #22 ENSGT00390000012935 #23 ENSGT00960000189374 ENSGT00940000158287 #24 ENSGT00390000014757.g #25 ENSGT00940000164059 ENSGT00930000151062 #27 ENSGT00940000160630 #28 ENSGT00390000007055 #30 ENSGT00940000154348.c.b.a #31 ENSGT00390000016223 #32 ENSGT00940000160394.a #33 ENSGT00390000007640.b #34 ENSGT00940000156152 #36 ENSGT00940000159848 #37 ENSGT00940000156124 Archosauria ANCESTRAL SPECIES 5 ENSGT00940000158775 #9 ENSGT00390000014065 #10 ENSGT00940000158970 #11 ENSGT00390000016785 #12 ENSGT01020000230346.E #13 ENSGT00390000015299.a.b.a ENSGT00940000157349 #14 ENSGT00940000159754 #15 ENSGT00940000157698.b #16 ENSGT00940000156718 #17 ENSGT00940000159068 #18 ENSGT00940000158446 #19 ENSGT00510000047881 #20 ENSGT00950000182973.b.a #21 ENSGT00940000161474.b.b ENSGT00940000155568 #22 ENSGT00390000012935 #23 ENSGT00960000189374 ENSGT00940000158287 #24 ENSGT00390000014757.g #25 ENSGT00940000164059 ENSGT00930000151062 #27 ENSGT00940000160630 #28 ENSGT00390000007055 #30 ENSGT00940000154348.c.b.a #31 ENSGT00390000016223 #32 ENSGT00940000160394.a #33 ENSGT00390000007640.b #34 ENSGT00940000156152 #36 ENSGT00940000159848 #37 ENSGT00940000156124 Aves ANCESTRAL SPECIES 2 ENSGT00390000017480 #8 ENSGT00940000158775 #9 ENSGT00390000014065 #10 ENSGT00940000158970 #11 ENSGT00390000016785 #12 ENSGT01020000230346.E #13 ENSGT00390000015299.a.b.a ENSGT00940000157349 #14 ENSGT00940000159754 #15 ENSGT00940000157698.b #16 ENSGT00940000156718 #17 ENSGT00940000159068 #18 ENSGT00940000158446 #19 ENSGT00510000047881 #20 ENSGT00950000182973.b.a #21 ENSGT00940000155568 #22 ENSGT00390000012935 #23 ENSGT00960000189374 ENSGT00940000158287 #24 ENSGT00390000014757.g #25 ENSGT00940000164059 ENSGT00930000151062 #27 ENSGT00940000160630 #28 ENSGT00390000007055 #30 ENSGT00940000154348.c.b.a #31 ENSGT00390000016223 #32 ENSGT00940000160394.a #33 ENSGT00390000007640.b #34 ENSGT00940000156152 #36 ENSGT00940000159848 #37 ENSGT00940000156124 Neognathae ANCESTRAL SPECIES 4 ENSGT00390000017480 #8 ENSGT00940000158775 #9 ENSGT00390000014065 #10 ENSGT00940000158970 #11 ENSGT00390000016785 #12 ENSGT01020000230346.E #13 ENSGT00390000015299.a.b.a ENSGT00940000157349 #14 ENSGT00940000159754 #15 ENSGT00940000157698.b #16 ENSGT00940000156718 #17 ENSGT00940000159068 #18 ENSGT00940000158446 #19 ENSGT00510000047881 #20 ENSGT00950000182973.b.a #21 ENSGT00940000155568 #22 ENSGT00390000012935 #23 ENSGT00960000189374 ENSGT00940000158287 #24 ENSGT00390000014757.g #25 ENSGT00940000164059 ENSGT00930000151062 #27 ENSGT00940000160630 #28 ENSGT00390000007055 #30 ENSGT00940000154348.c.b.a #31 ENSGT00390000016223 #32 ENSGT00940000160394.a #33 ENSGT00390000007640.b #34 ENSGT00940000156152 #36 ENSGT00940000159848 #37 ENSGT00940000156124 Neognathae_b ANCESTRAL SPECIES 6 ENSGT00390000017480 #8 ENSGT00940000158775 #9 ENSGT00390000014065 #10 ENSGT00940000158970 #11 ENSGT00390000016785 #12 ENSGT01020000230346.E #13 ENSGT00390000015299.a.b.a ENSGT00940000157349 #14 ENSGT00940000159754 #15 ENSGT00940000157698.b #16 ENSGT00940000156718 #17 ENSGT00940000159068 #18 ENSGT00940000158446 #19 ENSGT00510000047881 #20 ENSGT00950000182973.b.a #21 ENSGT00940000155568 #22 ENSGT00390000012935 #23 ENSGT00960000189374 ENSGT00940000158287 #24 ENSGT00390000014757.g #25 ENSGT00940000164059 ENSGT00930000151062 #27 ENSGT00940000160630 #28 ENSGT00390000007055 #30 ENSGT00940000154348.c.b.a #31 ENSGT00390000016223 #32 ENSGT00940000160394.a #33 ENSGT00390000007640.b #34 ENSGT00940000156152 #36 ENSGT00940000159848 #37 ENSGT00940000156124 Passeriformes ANCESTRAL SPECIES 5 ENSGT00390000017480 #8 ENSGT00940000158775 #9 ENSGT00390000014065 #10 ENSGT00940000158970 #11 ENSGT00390000016785 #12 ENSGT01020000230346.E #13 ENSGT00390000015299.a.b.a ENSGT00940000157349 #14 ENSGT00940000159754 #15 ENSGT00940000157698.b #16 ENSGT00940000156718 #17 ENSGT00940000159068 #18 ENSGT00940000158446 #19 ENSGT00510000047881 #20 ENSGT00950000182973.b.a #21 ENSGT00940000155568 #22 ENSGT00390000012935 #23 ENSGT00960000189374 ENSGT00940000158287 #24 ENSGT00390000014757.g #25 ENSGT00940000164059 ENSGT00940000160630 #28 ENSGT00390000007055 #30 ENSGT00940000154348.c.b.a #31 ENSGT00390000016223 #32 ENSGT00940000160394.a #33 ENSGT00390000007640.b #34 ENSGT00940000156152 #36 ENSGT00940000159848 #37 ENSGT00940000156124 ENSGT00940000158758 Great tit MODERN SPECIES 25 ENSPMJG00000000873 NDUFS3 (ENSPMJG00000000879) #8 KBTBD4 (ENSPMJG00000000885) #9 PTPMT1 (ENSPMJG00000000896) #10 CELF1 (ENSPMJG00000000899) #11 PSMC3 (ENSPMJG00000000915) #13 ENSPMJG00000000920 SLC39A13 (ENSPMJG00000000932) #14 SPI1 (ENSPMJG00000000997) #15 MYBPC3 (ENSPMJG00000001019) #16 MADD (ENSPMJG00000004069) #17 NR1H3 (ENSPMJG00000012279) #18 ACP2 (ENSPMJG00000012280) #19 DDB2 (ENSPMJG00000012286) #20 PACSIN3 (ENSPMJG00000012291) #21 ARFGAP2 (ENSPMJG00000012299) #22 CSTPP1 (ENSPMJG00000012300) #23 ENSPMJG00000012301 LRP4 (ENSPMJG00000012302) #24 CKAP5 (ENSPMJG00000012334) #25 ENSPMJG00000013670 ARHGAP1 (ENSPMJG00000013679) #28 ATG13 (ENSPMJG00000013870) #30 HARBI1 (ENSPMJG00000013871) #31 AMBRA1 (ENSPMJG00000013872) #32 CHRM4 (ENSPMJG00000014372) #33 MDK (ENSPMJG00000014373) #34 DGKZ (ENSPMJG00000014374) #36 CREB3L1 (ENSPMJG00000014375) #37 PHF21A (ENSPMJG00000014377) LARGE2 (ENSPMJG00000014378) Passeriformes_d ANCESTRAL SPECIES 5 ENSGT00390000017480 #8 ENSGT00940000158775 #9 ENSGT00390000014065 #10 ENSGT00940000158970 #11 ENSGT00390000016785 #12 ENSGT01020000230346.E #13 ENSGT00390000015299.a.b.a ENSGT00940000157349 #14 ENSGT00940000159754 #15 ENSGT00940000157698.b #16 ENSGT00940000156718 #17 ENSGT00940000159068 #18 ENSGT00940000158446 #19 ENSGT00510000047881 #20 ENSGT00950000182973.b.a #21 ENSGT00940000155568 #22 ENSGT00390000012935 #23 ENSGT00960000189374 ENSGT00940000158287 #24 ENSGT00390000014757.g #25 ENSGT00940000164059 ENSGT00940000160630 #28 ENSGT00390000007055 #30 ENSGT00940000154348.c.b.a #31 ENSGT00390000016223 #32 ENSGT00940000160394.a #33 ENSGT00390000007640.b #34 ENSGT00940000156152 #36 ENSGT00940000159848 #37 ENSGT00940000156124 ENSGT00940000158758 Flycatcher MODERN SPECIES 24 NDUFS3 (ENSFALG00000006411) #8 PTPMT1 (ENSFALG00000006406) #10 CELF1 (ENSFALG00000006402) #11 RAPSN (ENSFALG00000006401) #12 PSMC3 (ENSFALG00000006396) #13 ENSFALG00000028830 SLC39A13 (ENSFALG00000006394) #14 SPI1 (ENSFALG00000024717) #15 MYBPC3 (ENSFALG00000006369) #16 ENSFALG00000006333 #17 ENSFALG00000026717 #17 NR1H3 (ENSFALG00000006313) #18 ACP2 (ENSFALG00000026896) #19 DDB2 (ENSFALG00000025215) #20 PACSIN3 (ENSFALG00000006296) #21 ARFGAP2 (ENSFALG00000006292) #22 CSTPP1 (ENSFALG00000024272) #23 ENSFALG00000025106 LRP4 (ENSFALG00000006286) #24 CKAP5 (ENSFALG00000006282) #25 ENSFALG00000006272 ARHGAP1 (ENSFALG00000006265) #28 ATG13 (ENSFALG00000006261) #30 HARBI1 (ENSFALG00000028036) #31 AMBRA1 (ENSFALG00000006252) #32 CHRM4 (ENSFALG00000014204) #33 MDK (ENSFALG00000006248) #34 DGKZ (ENSFALG00000006244) #36 CREB3L1 (ENSFALG00000006242) #37 PHF21A (ENSFALG00000006238) LARGE2 (ENSFALG00000006222) Passeriformes_g ANCESTRAL SPECIES ENSGT00390000017480 #8 ENSGT00940000158775 #9 ENSGT00390000014065 #10 ENSGT00940000158970 #11 ENSGT00390000016785 #12 ENSGT01020000230346.E #13 ENSGT00390000015299.a.b.a ENSGT00940000157349 #14 ENSGT00940000159754 #15 ENSGT00940000157698.b #16 ENSGT00940000156718 #17 ENSGT00940000159068 #18 ENSGT00940000158446 #19 ENSGT00510000047881 #20 ENSGT00950000182973.b.a #21 ENSGT00940000155568 #22 ENSGT00390000012935 #23 ENSGT00940000158287 #24 ENSGT00390000014757.g #25 ENSGT00940000164059 ENSGT00940000160630 #28 ENSGT00390000007055 #30 ENSGT00940000154348.c.b.a #31 ENSGT00390000016223 #32 ENSGT00940000160394.a #33 ENSGT00390000007640.b #34 ENSGT00940000156152 #36 ENSGT00940000159848 #37 ENSGT00940000156124 ENSGT00940000158758 ENSGT00390000017790 Passeroidea ANCESTRAL SPECIES 1 ENSGT00390000017480 #8 ENSGT00940000158775 #9 ENSGT00390000014065 #10 ENSGT00940000158970 #11 ENSGT00390000016785 #12 ENSGT01020000230346.E #13 ENSGT00390000015299.a.b.a ENSGT00940000157349 #14 ENSGT00940000159754 #15 ENSGT00940000157698.b #16 ENSGT00940000156718 #17 ENSGT00940000159068 #18 ENSGT00940000158446 #19 ENSGT00510000047881 #20 ENSGT00950000182973.b.a #21 ENSGT00940000155568 #22 ENSGT00390000012935 #23 ENSGT00940000158287 #24 ENSGT00390000014757.g #25 ENSGT00940000164059 ENSGT00940000160630 #28 ENSGT00390000007055 #30 ENSGT00940000154348.c.b.a #31 ENSGT00390000016223 #32 ENSGT00940000160394.a #33 ENSGT00390000007640.b #34 ENSGT00940000156152 #36 ENSGT00940000159848 #37 ENSGT00940000156124 ENSGT00940000158758 ENSGT00390000017790 Zebra finch MODERN SPECIES 27 ENSTGUG00000019362 NDUFS3 (ENSTGUG00000010343) #8 KBTBD4 (ENSTGUG00000010361) #9 PTPMT1 (ENSTGUG00000010369) #10 CELF1 (ENSTGUG00000010377) #11 RAPSN (ENSTGUG00000010400) #12 PSMC3 (ENSTGUG00000028944) #13 SLC39A13 (ENSTGUG00000010418) #14 SPI1 (ENSTGUG00000026691) #15 MYBPC3 (ENSTGUG00000010426) #16 MADD (ENSTGUG00000010454) #17 NR1H3 (ENSTGUG00000010475) #18 ACP2 (ENSTGUG00000010486) #19 DDB2 (ENSTGUG00000010493) #20 PACSIN3 (ENSTGUG00000010497) #21 ARFGAP2 (ENSTGUG00000010515) #22 CSTPP1 (ENSTGUG00000010527) #23 LRP4 (ENSTGUG00000010533) #24 CKAP5 (ENSTGUG00000023569) #25 ENSTGUG00000010580 ARHGAP1 (ENSTGUG00000010593) #28 ATG13 (ENSTGUG00000010603) #30 HARBI1 (ENSTGUG00000010627) #31 AMBRA1 (ENSTGUG00000010628) #32 CHRM4 (ENSTGUG00000010635) #33 MDK (ENSTGUG00000010641) #34 DGKZ (ENSTGUG00000010647) #36 CREB3L1 (ENSTGUG00000010669) #37 PHF21A (ENSTGUG00000010680) LARGE2 (ENSTGUG00000010689) PEX16 (ENSTGUG00000010706) Common canary MODERN SPECIES 3 NDUFS3 (ENSSCAG00000003420) #8 KBTBD4 (ENSSCAG00000003415) #9 PTPMT1 (ENSSCAG00000003409) #10 CELF1 (ENSSCAG00000003397) #11 RAPSN (ENSSCAG00000003388) #12 PSMC3 (ENSSCAG00000003373) #13 ENSSCAG00000003365 SLC39A13 (ENSSCAG00000003352) #14 SPI1 (ENSSCAG00000003345) #15 MYBPC3 (ENSSCAG00000003326) #16 MADD (ENSSCAG00000003307) #17 NR1H3 (ENSSCAG00000003301) #18 ACP2 (ENSSCAG00000003297) #19 DDB2 (ENSSCAG00000003292) #20 PACSIN3 (ENSSCAG00000003283) #21 ARFGAP2 (ENSSCAG00000003185) #22 CSTPP1 (ENSSCAG00000003159) #23 LRP4 (ENSSCAG00000003129) #24 CKAP5 (ENSSCAG00000003039) #25 ENSSCAG00000003007 ARHGAP1 (ENSSCAG00000002990) #28 ATG13 (ENSSCAG00000002981) #30 HARBI1 (ENSSCAG00000002978) #31 AMBRA1 (ENSSCAG00000002743) #32 CHRM4 (ENSSCAG00000002686) #33 MDK (ENSSCAG00000002680) #34 DGKZ (ENSSCAG00000002643) #36 CREB3L1 (ENSSCAG00000002634) #37 PHF21A (ENSSCAG00000002624) LARGE2 (ENSSCAG00000002619) ENSSCAG00000002614 Medium ground finch MODERN SPECIES 15 ENSGFOG00000006160 NDUFS3 (ENSGFOG00000006152) #8 KBTBD4 (ENSGFOG00000006147) #9 CELF1 (ENSGFOG00000006114) #11 RAPSN (ENSGFOG00000006104) #12 PSMC3 (ENSGFOG00000006090) #13 ENSGFOG00000006082 SLC39A13 (ENSGFOG00000006071) #14 SPI1 (ENSGFOG00000006067) #15 MYBPC3 (ENSGFOG00000005710) #16 MADD (ENSGFOG00000005599) #17 NR1H3 (ENSGFOG00000005580) #18 ACP2 (ENSGFOG00000005529) #19 DDB2 (ENSGFOG00000005508) #20 PACSIN3 (ENSGFOG00000005468) #21 ARFGAP2 (ENSGFOG00000005441) #22 CSTPP1 (ENSGFOG00000005426) #23 LRP4 (ENSGFOG00000005261) #24 CKAP5 (ENSGFOG00000005139) #25 ENSGFOG00000005094 ARHGAP1 (ENSGFOG00000005074) #28 ATG13 (ENSGFOG00000005043) #30 HARBI1 (ENSGFOG00000005030) #31 AMBRA1 (ENSGFOG00000005019) #32 CHRM4 (ENSGFOG00000005010) #33 MDK (ENSGFOG00000005000) #34 DGKZ (ENSGFOG00000000238) #36 CREB3L1 (ENSGFOG00000000033) #37 PHF21A (ENSGFOG00000002605) LARGE2 (ENSGFOG00000002573) PEX16 (ENSGFOG00000002552) Neognathae_c ANCESTRAL SPECIES 6 ENSGT00390000017480 #8 ENSGT00940000158775 #9 ENSGT00390000014065 #10 ENSGT00940000158970 #11 ENSGT00390000016785 #12 ENSGT01020000230346.E #13 ENSGT00390000015299.a.b.a ENSGT00940000157349 #14 ENSGT00940000159754 #15 ENSGT00940000157698.b #16 ENSGT00940000156718 #17 ENSGT00940000159068 #18 ENSGT00940000158446 #19 ENSGT00510000047881 #20 ENSGT00950000182973.b.a #21 ENSGT00940000155568 #22 ENSGT00390000012935 #23 ENSGT00940000158287 #24 ENSGT00390000014757.g #25 ENSGT00940000164059 ENSGT00930000151062 #27 ENSGT00940000160630 #28 ENSGT00390000007055 #30 ENSGT00940000154348.c.b.a #31 ENSGT00390000016223 #32 ENSGT00940000160394.a #33 ENSGT00390000007640.b #34 ENSGT00940000156152 #36 ENSGT00940000159848 #37 ENSGT00940000156124 ENSGT00940000158758 Kakapo MODERN SPECIES 21 NDUFS3 (ENSSHBG00005002665) #8 KBTBD4 (ENSSHBG00005002689) #9 PTPMT1 (ENSSHBG00005002711) #10 CELF1 (ENSSHBG00005002788) #11 RAPSN (ENSSHBG00005002915) #12 PSMC3 (ENSSHBG00005002985) #13 ENSSHBG00005003006 SLC39A13 (ENSSHBG00005003021) #14 SPI1 (ENSSHBG00005003049) #15 MYBPC3 (ENSSHBG00005003084) #16 MADD (ENSSHBG00005003189) #17 NR1H3 (ENSSHBG00005003352) #18 ACP2 (ENSSHBG00005003371) #19 DDB2 (ENSSHBG00005003396) #20 PACSIN3 (ENSSHBG00005003435) #21 ARFGAP2 (ENSSHBG00005003460) #22 CSTPP1 (ENSSHBG00005003475) #23 LRP4 (ENSSHBG00005003580) #24 CKAP5 (ENSSHBG00005003723) #25 ENSSHBG00005003750 ARHGAP1 (ENSSHBG00005003766) #28 ATG13 (ENSSHBG00005003785) #30 HARBI1 (ENSSHBG00005003802) #31 AMBRA1 (ENSSHBG00005003842) #32 CHRM4 (ENSSHBG00005003882) #33 MDK (ENSSHBG00005003898) #34 DGKZ (ENSSHBG00005003935) #36 CREB3L1 (ENSSHBG00005003978) #37 PHF21A (ENSSHBG00005004004) LARGE2 (ENSSHBG00005004024) PEX16 (ENSSHBG00005004041) Golden eagle MODERN SPECIES 11 NDUFS3 (ENSACCG00020004622) #8 KBTBD4 (ENSACCG00020004612) #9 PTPMT1 (ENSACCG00020004607) #10 CELF1 (ENSACCG00020004593) #11 RAPSN (ENSACCG00020004581) #12 PSMC3 (ENSACCG00020004570) #13 ENSACCG00020004563 SLC39A13 (ENSACCG00020009305) #14 SPI1 (ENSACCG00020009293) #15 MYBPC3 (ENSACCG00020009268) #16 MADD (ENSACCG00020009078) #17 NR1H3 (ENSACCG00020008972) #18 ACP2 (ENSACCG00020008959) #19 DDB2 (ENSACCG00020008939) #20 PACSIN3 (ENSACCG00020008914) #21 ARFGAP2 (ENSACCG00020008855) #22 CSTPP1 (ENSACCG00020008796) #23 LRP4 (ENSACCG00020008390) #24 CKAP5 (ENSACCG00020007836) #25 ENSACCG00020007794 ZNF408 (ENSACCG00020007780) #27 ARHGAP1 (ENSACCG00020007772) #28 ATG13 (ENSACCG00020007724) #30 HARBI1 (ENSACCG00020007689) #31 AMBRA1 (ENSACCG00020007670) #32 CHRM4 (ENSACCG00020007659) #33 MDK (ENSACCG00020007651) #34 DGKZ (ENSACCG00020007561) #36 CREB3L1 (ENSACCG00020007513) #37 PHF21A (ENSACCG00020007479) LARGE2 (ENSACCG00020007454) Galloanserae ANCESTRAL SPECIES 4 ENSGT00390000017480 #8 ENSGT00940000158775 #9 ENSGT00390000014065 #10 ENSGT00940000158970 #11 ENSGT00390000016785 #12 ENSGT01020000230346.E #13 ENSGT00390000015299.a.b.a ENSGT00940000157349 #14 ENSGT00940000159754 #15 ENSGT00940000157698.b #16 ENSGT00940000156718 #17 ENSGT00940000159068 #18 ENSGT00940000158446 #19 ENSGT00510000047881 #20 ENSGT00950000182973.b.a #21 ENSGT00940000155568 #22 ENSGT00390000012935 #23 ENSGT00960000189374 ENSGT00940000158287 #24 ENSGT00390000014757.g #25 ENSGT00940000164059 ENSGT00930000151062 #27 ENSGT00940000160630 #28 ENSGT00390000007055 #30 ENSGT00940000154348.c.b.a #31 ENSGT00390000016223 #32 ENSGT00940000160394.a #33 ENSGT00390000007640.b #34 ENSGT00940000156152 #36 ENSGT00940000159848 #37 ENSGT00940000156124 Anatidae ANCESTRAL SPECIES 26 ENSGT00510000047881 #20 ENSGT00950000182973.b.a #21 ENSGT00940000155568 #22 ENSGT00390000012935 #23 ENSGT00960000189374 ENSGT00940000158287 #24 ENSGT00390000014757.g #25 ENSGT00940000164059 ENSGT00930000151062 #27 ENSGT00940000160630 #28 ENSGT00390000007055 #30 ENSGT00940000154348.c.b.a #31 ENSGT00390000016223 #32 ENSGT00940000160394.a #33 ENSGT00390000007640.b #34 ENSGT00940000156152 #36 ENSGT00940000159848 #37 ENSGT00940000156124 Duck MODERN SPECIES 23 ENSAPLG00000002551 PLCB2 (ENSAPLG00000002574) PAK6 (ENSAPLG00000003937) BUB1B (ENSAPLG00000004271) DRD4 (ENSAPLG00000011878) DEAF1 (ENSAPLG00000011215) TMEM80 (ENSAPLG00000031153) EPS8L2 (ENSAPLG00000017050) ENSAPLG00000021646 TALDO1 (ENSAPLG00000010471) GATD1 (ENSAPLG00000010378) ENSAPLG00000001178 ENSAPLG00000010090 DDB2 (ENSAPLG00000007909) #20 PACSIN3 (ENSAPLG00000007958) #21 ARFGAP2 (ENSAPLG00000008452) #22 CSTPP1 (ENSAPLG00000009411) #23 ENSAPLG00000028080 LRP4 (ENSAPLG00000009787) #24 CKAP5 (ENSAPLG00000011076) #25 ENSAPLG00000013716 ENSAPLG00000025197 #27 ARHGAP1 (ENSAPLG00000014489) #28 ATG13 (ENSAPLG00000015034) #30 HARBI1 (ENSAPLG00000015636) #31 AMBRA1 (ENSAPLG00000015643) #32 CHRM4 (ENSAPLG00000001514) #33 MDK (ENSAPLG00000015677) #34 DGKZ (ENSAPLG00000015859) #36 ENSAPLG00000020029 #37 PHF21A (ENSAPLG00000002448) Pink-footed goose MODERN SPECIES 44 ANO9 (ENSABRG00000009990) SIGIRR (ENSABRG00000010038) PKP3 (ENSABRG00000010049) B4GALNT4 (ENSABRG00000010077) ENSABRG00000010112 ENSABRG00000010129 IFITM5 (ENSABRG00000010133) PGGHG (ENSABRG00000010191) ENSABRG00000010570 PSMD13 (ENSABRG00000010627) SIRT3 (ENSABRG00000011173) RIC8A (ENSABRG00000011180) BET1L (ENSABRG00000011228) DDB2 (ENSABRG00000011250) #20 PACSIN3 (ENSABRG00000011272) #21 ARFGAP2 (ENSABRG00000011294) #22 CSTPP1 (ENSABRG00000011314) #23 LRP4 (ENSABRG00000011397) #24 CKAP5 (ENSABRG00000012270) #25 ENSABRG00000014826 ZNF408 (ENSABRG00000014838) #27 ARHGAP1 (ENSABRG00000014848) #28 ATG13 (ENSABRG00000015023) #30 HARBI1 (ENSABRG00000015289) #31 AMBRA1 (ENSABRG00000015319) #32 CHRM4 (ENSABRG00000015532) #33 ENSABRG00000015542 #34 DGKZ (ENSABRG00000015580) #36 CREB3L1 (ENSABRG00000015657) #37 PHF21A (ENSABRG00000015666) LARGE2 (ENSABRG00000015677) Phasianidae ANCESTRAL SPECIES 4 ENSGT00390000017480 #8 ENSGT00940000158775 #9 ENSGT00390000014065 #10 ENSGT00940000158970 #11 ENSGT00390000016785 #12 ENSGT01020000230346.E #13 ENSGT00390000015299.a.b.a ENSGT00940000157349 #14 ENSGT00940000159754 #15 ENSGT00940000157698.b #16 ENSGT00940000156718 #17 ENSGT00940000159068 #18 ENSGT00940000158446 #19 ENSGT00510000047881 #20 ENSGT00950000182973.b.a #21 ENSGT00940000155568 #22 ENSGT00390000012935 #23 ENSGT00960000189374 ENSGT00940000158287 #24 ENSGT00390000014757.g #25 ENSGT00940000164059 ENSGT00940000160630 #28 ENSGT00390000007055 #30 ENSGT00940000154348.c.b.a #31 ENSGT00390000016223 #32 ENSGT00940000160394.a #33 ENSGT00390000007640.b #34 ENSGT00940000156152 #36 ENSGT00940000159848 #37 ENSGT00940000156124 ENSGT00940000158758 Japanese quail MODERN SPECIES 23 KBTBD4 (ENSCJPG00005010839) #9 PTPMT1 (ENSCJPG00005010840) #10 CELF1 (ENSCJPG00005010841) #11 RAPSN (ENSCJPG00005010842) #12 PSMC3 (ENSCJPG00005010843) #13 ENSCJPG00005010844 SLC39A13 (ENSCJPG00005010845) #14 SPI1 (ENSCJPG00005010846) #15 MYBPC3 (ENSCJPG00005010847) #16 ENSCJPG00005011665 #17 ENSCJPG00005011707 #17 NR1H3 (ENSCJPG00005012023) #18 ACP2 (ENSCJPG00005012024) #19 DDB2 (ENSCJPG00005012054) #20 PACSIN3 (ENSCJPG00005012055) #21 ARFGAP2 (ENSCJPG00005012077) #22 CSTPP1 (ENSCJPG00005012079) #23 ENSCJPG00005012080 LRP4 (ENSCJPG00005012083) #24 CKAP5 (ENSCJPG00005012374) #25 ENSCJPG00005013566 ARHGAP1 (ENSCJPG00005013573) #28 ATG13 (ENSCJPG00005013688) #30 HARBI1 (ENSCJPG00005013781) #31 AMBRA1 (ENSCJPG00005013782) #32 CHRM4 (ENSCJPG00005013889) #33 MDK (ENSCJPG00005013890) #34 DGKZ (ENSCJPG00005013891) #36 CREB3L1 (ENSCJPG00005013892) #37 PHF21A (ENSCJPG00005013893) LARGE2 (ENSCJPG00005014313) Phasianidae_b ANCESTRAL SPECIES 3 ENSGT00390000017480 #8 ENSGT00940000158775 #9 ENSGT00390000014065 #10 ENSGT00940000158970 #11 ENSGT00390000016785 #12 ENSGT01020000230346.E #13 ENSGT00390000015299.a.b.a ENSGT00940000157349 #14 ENSGT00940000159754 #15 ENSGT00940000157698.b #16 ENSGT00940000156718 #17 ENSGT00940000159068 #18 ENSGT00940000158446 #19 ENSGT00510000047881 #20 ENSGT00950000182973.b.a #21 ENSGT00940000155568 #22 ENSGT00390000012935 #23 ENSGT00940000158287 #24 ENSGT00390000014757.g #25 ENSGT00940000164059 ENSGT00940000160630 #28 ENSGT00390000007055 #30 ENSGT00940000154348.c.b.a #31 ENSGT00390000016223 #32 ENSGT00940000160394.a #33 ENSGT00390000007640.b #34 ENSGT00940000156152 #36 ENSGT00940000159848 #37 ENSGT00940000156124 ENSGT00940000158758 ENSGT00390000017790 Chicken MODERN SPECIES 34 KBTBD4 (ENSGALG00010022032) #9 NDUFS3 (ENSGALG00010023836) #8 PTPMT1 (ENSGALG00010022073) #10 CELF1 (ENSGALG00010022161) #11 RAPSN (ENSGALG00010022229) #12 PSMC3 (ENSGALG00010022256) #13 ENSGALG00010022328 SLC39A13 (ENSGALG00010022353) #14 SPI1 (ENSGALG00010022386) #15 MYBPC3 (ENSGALG00010022468) #16 MADD (ENSGALG00010022619) #17 NR1H3 (ENSGALG00010022650) #18 ACP2 (ENSGALG00010022727) #19 DDB2 (ENSGALG00010022792) #20 PACSIN3 (ENSGALG00010022819) #21 ARFGAP2 (ENSGALG00010022838) #22 CSTPP1 (ENSGALG00010022864) #23 LRP4 (ENSGALG00010022929) #24 CKAP5 (ENSGALG00010022971) #25 F2 (ENSGALG00010022987) ARHGAP1 (ENSGALG00010022997) #28 ATG13 (ENSGALG00010023064) #30 HARBI1 (ENSGALG00010023083) #31 AMBRA1 (ENSGALG00010023866) #32 CHRM4 (ENSGALG00010023120) #33 MDK (ENSGALG00010023136) #34 DGKZ (ENSGALG00010023196) #36 CREB3L1 (ENSGALG00010023217) #37 PHF21A (ENSGALG00010021790) LARGE2 (ENSGALG00010021848) ENSGALG00010021962 Turkey MODERN SPECIES 25 CREB3L1 (ENSMGAG00000011042) #37 ENSMGAG00000011016 #36 ENSMGAG00000017332 #32 ENSMGAG00000015803 #33 MDK (ENSMGAG00000011008) #34 ENSMGAG00000010997 #32 ENSMGAG00000010995 #31 ENSMGAG00000010974 #30 ENSMGAG00000010945 #28 ENSMGAG00000020851 #25 ENSMGAG00000010924 ENSMGAG00000010880 #25 ENSMGAG00000010850 #24 ENSMGAG00000022957 ENSMGAG00000019564 ENSMGAG00000010807 #22 ENSMGAG00000010789 #21 ENSMGAG00000010776 #19 ENSMGAG00000010763 #20 NR1H3 (ENSMGAG00000010751) #18 ENSMGAG00000021766 #17 ENSMGAG00000017760 #17 ENSMGAG00000010695 #16 ENSMGAG00000010682 #15 ENSMGAG00000010673 #14 ENSMGAG00000010651 #13 ENSMGAG00000010671 ENSMGAG00000010605 #12 ENSMGAG00000021247 #11 ENSMGAG00000010629 #11 KBTBD4 (ENSMGAG00000010626) #9 African ostrich MODERN SPECIES 885 FAM180B (ENSSCUG00000017343) NDUFS3 (ENSSCUG00000017342) #8 KBTBD4 (ENSSCUG00000017340) #9 CELF1 (ENSSCUG00000017336) #11 RAPSN (ENSSCUG00000017332) #12 PSMC3 (ENSSCUG00000017315) #13 ENSSCUG00000017312 SLC39A13 (ENSSCUG00000017311) #14 SPI1 (ENSSCUG00000017309) #15 MYBPC3 (ENSSCUG00000017219) #16 MADD (ENSSCUG00000017005) #17 NR1H3 (ENSSCUG00000016935) #18 ACP2 (ENSSCUG00000016921) #19 DDB2 (ENSSCUG00000016918) #20 PACSIN3 (ENSSCUG00000016916) #21 ARFGAP2 (ENSSCUG00000016901) #22 CSTPP1 (ENSSCUG00000016889) #23 LRP4 (ENSSCUG00000016879) #24 CKAP5 (ENSSCUG00000016863) #25 ENSSCUG00000016848 Australian saltwater crocodile MODERN SPECIES 64 NDUFS3 (ENSCPRG00005017439) #8 KBTBD4 (ENSCPRG00005017435) #9 PTPMT1 (ENSCPRG00005017408) #10 CELF1 (ENSCPRG00005017370) #11 PSMC3 (ENSCPRG00005017298) #13 ENSCPRG00005017284 SLC39A13 (ENSCPRG00005017281) #14 SPI1 (ENSCPRG00005017278) #15 MYBPC3 (ENSCPRG00005017258) #16 MADD (ENSCPRG00005015319) #17 NR1H3 (ENSCPRG00005014870) #18 ACP2 (ENSCPRG00005014864) #19 DDB2 (ENSCPRG00005014860) #20 PACSIN3 (ENSCPRG00005014853) #21 ENSCPRG00005014850 ARFGAP2 (ENSCPRG00005014830) #22 CSTPP1 (ENSCPRG00005014822) #23 LRP4 (ENSCPRG00005014807) #24 CKAP5 (ENSCPRG00005014039) #25 ENSCPRG00005013914 ZNF408 (ENSCPRG00005013908) #27 ARHGAP1 (ENSCPRG00005013849) #28 ATG13 (ENSCPRG00005013813) #30 HARBI1 (ENSCPRG00005013808) #31 AMBRA1 (ENSCPRG00005013805) #32 CHRM4 (ENSCPRG00005013799) #33 MDK (ENSCPRG00005013793) #34 DGKZ (ENSCPRG00005012247) #36 ENSCPRG00005011946 CREB3L1 (ENSCPRG00005011938) #37 PHF21A (ENSCPRG00005011871) Cryptodira ANCESTRAL SPECIES 3 ENSGT00390000014065 #10 ENSGT00940000158970 #11 ENSGT00390000016785 #12 ENSGT01020000230346.E #13 ENSGT00390000015299.a.b.a ENSGT00940000157349 #14 ENSGT00940000159754 #15 ENSGT00940000157698.b #16 ENSGT00940000156718 #17 ENSGT00940000159068 #18 ENSGT00940000158446 #19 ENSGT00510000047881 #20 ENSGT00950000182973.b.a #21 ENSGT00940000161474.b.b ENSGT01030000235152.a ENSGT00940000155568 #22 ENSGT00390000012935 #23 ENSGT00960000189374 ENSGT00940000158287 #24 ENSGT00390000014757.g #25 ENSGT00940000164059 ENSGT00930000151062 #27 ENSGT00940000160630 #28 ENSGT00390000007055 #30 ENSGT00940000154348.c.b.a #31 ENSGT00390000016223 #32 ENSGT00940000160394.a #33 ENSGT00390000007640.b #34 ENSGT00940000156152 #36 ENSGT00940000159848 #37 ENSGT00940000156124 Testudinoidea ANCESTRAL SPECIES 3 ENSGT00390000014065 #10 ENSGT00940000158970 #11 ENSGT00390000016785 #12 ENSGT01020000230346.E #13 ENSGT00390000015299.a.b.a ENSGT00940000157349 #14 ENSGT00940000159754 #15 ENSGT00940000157698.b #16 ENSGT00940000156718 #17 ENSGT00940000159068 #18 ENSGT00940000158446 #19 ENSGT00510000047881 #20 ENSGT00950000182973.b.a #21 ENSGT00940000161474.b.b ENSGT01030000235152.a ENSGT00940000155568 #22 ENSGT00390000012935 #23 ENSGT00960000189374 ENSGT00940000158287 #24 ENSGT00390000014757.g #25 ENSGT00940000164059 ENSGT00930000151062 #27 ENSGT00940000160630 #28 ENSGT00390000007055 #30 ENSGT00940000154348.c.b.a #31 ENSGT00390000016223 #32 ENSGT00940000160394.a #33 ENSGT00390000007640.b #34 ENSGT00940000156152 #36 ENSGT00940000159848 #37 ENSGT00940000156124 Testudinidae ANCESTRAL SPECIES 2 ENSGT00390000014065 #10 ENSGT00940000158970 #11 ENSGT00390000016785 #12 ENSGT01020000230346.E #13 ENSGT00390000015299.a.b.a ENSGT00940000157349 #14 ENSGT00940000159754 #15 ENSGT00940000157698.b #16 ENSGT00940000156718 #17 ENSGT00940000159068 #18 ENSGT00940000158446 #19 ENSGT00510000047881 #20 ENSGT00950000182973.b.a #21 ENSGT00940000161474.b.b ENSGT01030000235152.a ENSGT00940000155568 #22 ENSGT00390000012935 #23 ENSGT00940000158287 #24 ENSGT00390000014757.g.c #25 ENSGT00940000164059 ENSGT00930000151062 #27 ENSGT00940000160630 #28 ENSGT00390000007055 #30 ENSGT00940000154348.c.b.a #31 ENSGT00390000016223 #32 ENSGT00940000160394.a #33 ENSGT00390000007640.b #34 ENSGT00940000156152 #36 ENSGT00940000159848 #37 ENSGT00940000156124 ENSGT00940000158758 Goode s thornscrub tortoise MODERN SPECIES 18 PTPMT1 (ENSGEVG00005018678) #10 CELF1 (ENSGEVG00005008981) #11 RAPSN (ENSGEVG00005009044) #12 PSMC3 (ENSGEVG00005009237) #13 ENSGEVG00005009277 SLC39A13 (ENSGEVG00005009349) #14 SPI1 (ENSGEVG00005009450) #15 MYBPC3 (ENSGEVG00005009503) #16 MADD (ENSGEVG00005009759) #17 NR1H3 (ENSGEVG00005009930) #18 ACP2 (ENSGEVG00005009970) #19 DDB2 (ENSGEVG00005010017) #20 PACSIN3 (ENSGEVG00005010100) #21 ENSGEVG00005010139 ENSGEVG00005010166 ARFGAP2 (ENSGEVG00005010210) #22 CSTPP1 (ENSGEVG00005010346) #23 LRP4 (ENSGEVG00005010404) #24 CKAP5 (ENSGEVG00005010815) #25 ENSGEVG00005011016 ZNF408 (ENSGEVG00005011280) #27 ARHGAP1 (ENSGEVG00005011311) #28 ATG13 (ENSGEVG00005011349) #30 HARBI1 (ENSGEVG00005011393) #31 AMBRA1 (ENSGEVG00005011573) #32 CHRM4 (ENSGEVG00005011709) #33 MDK (ENSGEVG00005011735) #34 DGKZ (ENSGEVG00005011914) #36 CREB3L1 (ENSGEVG00005012256) #37 PHF21A (ENSGEVG00005012493) LARGE2 (ENSGEVG00005012556) Abingdon island giant tortoise MODERN SPECIES 852 SPI1 (ENSCABG00000010435) #15 MYBPC3 (ENSCABG00000010433) #16 MADD (ENSCABG00000001771) #17 NR1H3 (ENSCABG00000001529) #18 ACP2 (ENSCABG00000001524) #19 DDB2 (ENSCABG00000001519) #20 PACSIN3 (ENSCABG00000001512) #21 ENSCABG00000001508 ARFGAP2 (ENSCABG00000001499) #22 CSTPP1 (ENSCABG00000001380) #23 Emydidae ANCESTRAL SPECIES 2 ENSGT00390000014065 #10 ENSGT00940000158970 #11 ENSGT00390000016785 #12 ENSGT01020000230346.E #13 ENSGT00390000015299.a.b.a ENSGT00940000157349 #14 ENSGT00940000159754 #15 ENSGT00940000157698.b #16 ENSGT00940000156718 #17 ENSGT00940000159068 #18 ENSGT00940000158446 #19 ENSGT00510000047881 #20 ENSGT00950000182973.b.a #21 ENSGT00940000161474.b.b ENSGT01030000235152.a ENSGT00940000155568 #22 ENSGT00390000012935 #23 ENSGT00960000189374 ENSGT00940000158287 #24 ENSGT00390000014757.g #25 ENSGT00940000164059 ENSGT00930000151062 #27 ENSGT00940000160630 #28 ENSGT00390000007055 #30 ENSGT00940000154348.c.b.a #31 ENSGT00390000016223 #32 ENSGT00940000160394.a #33 ENSGT00390000007640.b #34 ENSGT00940000156152 #36 ENSGT00940000159848 #37 ENSGT00940000156124 painted turtle MODERN SPECIES 13 STK11 (ENSCPBG00000022919) CELF1 (ENSCPBG00000022914) #11 RAPSN (ENSCPBG00000022911) #12 PSMC3 (ENSCPBG00000022907) #13 ENSCPBG00000022906 SLC39A13 (ENSCPBG00000022904) #14 SPI1 (ENSCPBG00000022901) #15 MYBPC3 (ENSCPBG00000022606) #16 MADD (ENSCPBG00000015642) #17 NR1H3 (ENSCPBG00000015508) #18 ACP2 (ENSCPBG00000015503) #19 DDB2 (ENSCPBG00000015494) #20 PACSIN3 (ENSCPBG00000015488) #21 ENSCPBG00000015485 ENSCPBG00000015483 ARFGAP2 (ENSCPBG00000015479) #22 CSTPP1 (ENSCPBG00000015473) #23 LRP4 (ENSCPBG00000015397) #24 CKAP5 (ENSCPBG00000012821) #25 ENSCPBG00000012688 ZNF408 (ENSCPBG00000012683) #27 ARHGAP1 (ENSCPBG00000012676) #28 ATG13 (ENSCPBG00000012673) #30 HARBI1 (ENSCPBG00000012670) #31 AMBRA1 (ENSCPBG00000012667) #32 CHRM4 (ENSCPBG00000012662) #33 MDK (ENSCPBG00000012660) #34 DGKZ (ENSCPBG00000012640) #36 CREB3L1 (ENSCPBG00000012636) #37 PHF21A (ENSCPBG00000012630) LARGE2 (ENSCPBG00000012627) Three-toed box turtle MODERN SPECIES 40 PTPMT1 (ENSTMTG00000002180) #10 CELF1 (ENSTMTG00000002164) #11 RAPSN (ENSTMTG00000002125) #12 PSMC3 (ENSTMTG00000002110) #13 ENSTMTG00000002105 SLC39A13 (ENSTMTG00000002100) #14 SPI1 (ENSTMTG00000002089) #15 MYBPC3 (ENSTMTG00000002067) #16 MADD (ENSTMTG00000001980) #17 NR1H3 (ENSTMTG00000001955) #18 ACP2 (ENSTMTG00000001937) #19 DDB2 (ENSTMTG00000001919) #20 PACSIN3 (ENSTMTG00000001907) #21 ENSTMTG00000001899 ENSTMTG00000001884 ARFGAP2 (ENSTMTG00000001865) #22 CSTPP1 (ENSTMTG00000001857) #23 ENSTMTG00000001848 LRP4 (ENSTMTG00000001223) #24 CKAP5 (ENSTMTG00000000970) #25 ENSTMTG00000000941 ENSTMTG00000000932 ARHGAP1 (ENSTMTG00000000921) #28 ATG13 (ENSTMTG00000000864) #30 HARBI1 (ENSTMTG00000000846) #31 AMBRA1 (ENSTMTG00000000819) #32 CHRM4 (ENSTMTG00000000807) #33 MDK (ENSTMTG00000000793) #34 DGKZ (ENSTMTG00000000674) #36 CREB3L1 (ENSTMTG00000000596) #37 PHF21A (ENSTMTG00000000574) Chinese turtle MODERN SPECIES 2040 MADD (ENSPSIG00000011191) #17 NR1H3 (ENSPSIG00000010360) #18 ACP2 (ENSPSIG00000009418) #19 DDB2 (ENSPSIG00000009124) #20 PACSIN3 (ENSPSIG00000008397) #21 ENSPSIG00000008989 ARFGAP2 (ENSPSIG00000008332) #22 CSTPP1 (ENSPSIG00000007995) #23 LRP4 (ENSPSIG00000017168) #24 ENSPSIG00000017079 #25 Lepidosauria ANCESTRAL SPECIES 10 ENSGT00940000158775 #9 ENSGT00390000014065 #10 ENSGT00940000158970 #11 ENSGT00390000016785 #12 ENSGT01020000230346.E #13 ENSGT00390000015299.a.b.a ENSGT00940000157349 #14 ENSGT00940000159754 #15 ENSGT00940000157698.b #16 ENSGT00940000156718 #17 ENSGT00940000159068 #18 ENSGT00940000158446.bb #19 ENSGT00510000047881 #20 ENSGT00950000182973.b.a #21 ENSGT01030000235152.a ENSGT00940000155568 #22 ENSGT00390000012935 #23 ENSGT00960000189374 ENSGT00940000158287 #24 ENSGT00390000014757.g #25 ENSGT00940000164059 ENSGT00930000151062 #27 ENSGT00940000160630 #28 ENSGT00390000007055 #30 ENSGT00940000154348.c.b.a #31 ENSGT00390000016223 #32 ENSGT00940000160394.a #33 ENSGT00390000007640.b #34 ENSGT00940000156152 #36 ENSGT00940000159848 #37 ENSGT00940000156124 tuatara MODERN SPECIES 1197 KBTBD4 (ENSSPUG00000004313) #9 PTPMT1 (ENSSPUG00000004302) #10 CELF1 (ENSSPUG00000004228) #11 RAPSN (ENSSPUG00000004202) #12 PSMC3 (ENSSPUG00000004135) #13 ENSSPUG00000004090 SLC39A13 (ENSSPUG00000004075) #14 SPI1 (ENSSPUG00000004067) #15 MYBPC3 (ENSSPUG00000004024) #16 MADD (ENSSPUG00000003976) #17 NR1H3 (ENSSPUG00000003960) #18 ACP2 (ENSSPUG00000003932) #19 DDB2 (ENSSPUG00000003915) #20 PACSIN3 (ENSSPUG00000003902) #21 ENSSPUG00000003889 ARFGAP2 (ENSSPUG00000003827) #22 CSTPP1 (ENSSPUG00000003775) #23 LRP4 (ENSSPUG00000003709) #24 CKAP5 (ENSSPUG00000003628) #25 ENSSPUG00000003565 ZNF408 (ENSSPUG00000003559) #27 ARHGAP1 (ENSSPUG00000003553) #28 ATG13 (ENSSPUG00000003280) #30 HARBI1 (ENSSPUG00000003237) #31 AMBRA1 (ENSSPUG00000003231) #32 CHRM4 (ENSSPUG00000003226) #33 MDK (ENSSPUG00000003220) #34 DGKZ (ENSSPUG00000003133) #36 CREB3L1 (ENSSPUG00000003053) #37 PHF21A (ENSSPUG00000002397) LARGE2 (ENSSPUG00000002318) Episquamata ANCESTRAL SPECIES ENSGT00390000014065 #10 ENSGT00940000158970 #11 ENSGT00390000016785 #12 ENSGT01020000230346.E #13 ENSGT00390000015299.a.b.a ENSGT00940000157349 #14 ENSGT00940000159754 #15 ENSGT00940000157698.b #16 ENSGT00940000156718 #17 ENSGT00940000159068 #18 ENSGT00940000158446.bb #19 ENSGT00510000047881 #20 ENSGT00950000182973.b.a #21 ENSGT00940000161474.b ENSGT01030000235152.a ENSGT00940000155568 #22 ENSGT00390000012935 #23 ENSGT00960000189374 ENSGT00940000158287 #24 ENSGT00390000014757.g #25 ENSGT00940000164059 ENSGT00930000151062 #27 ENSGT00940000160630 #28 ENSGT00390000007055 #30 ENSGT00940000154348.c.b.a #31 ENSGT00390000016223 #32 ENSGT00940000160394.a #33 ENSGT00390000007640.b #34 ENSGT00940000156152 #36 ENSGT00940000159848 #37 ENSGT00940000156124 Laterata ANCESTRAL SPECIES 2 ENSGT00940000158775 #9 ENSGT00390000014065 #10 ENSGT00940000158970 #11 ENSGT00390000016785 #12 ENSGT01020000230346.E #13 ENSGT00390000015299.a.b.a ENSGT00940000157349 #14 ENSGT00940000159754 #15 ENSGT00940000157698.b #16 ENSGT00940000156718 #17 ENSGT00940000159068 #18 ENSGT00940000158446.bb #19 ENSGT00510000047881 #20 ENSGT00950000182973.b.a #21 ENSGT01030000235152.a ENSGT00940000155568 #22 ENSGT00390000012935 #23 ENSGT00940000158287 #24 ENSGT00390000014757.g #25 ENSGT00940000164059 ENSGT00930000151062 #27 ENSGT00940000160630 #28 ENSGT00390000007055 #30 ENSGT00940000154348.c.b.a #31 ENSGT00390000016223 #32 ENSGT00940000160394.a #33 ENSGT00390000007640.b #34 ENSGT00940000156152 #36 ENSGT00940000159848 #37 ENSGT00940000156124 ENSGT00940000158758 Common wall lizard MODERN SPECIES KBTBD4 (ENSPMRG00000003871) #9 PTPMT1 (ENSPMRG00000003875) #10 CELF1 (ENSPMRG00000003881) #11 PSMC3 (ENSPMRG00000003892) #13 ENSPMRG00000003975 ENSPMRG00000003979 SLC39A13 (ENSPMRG00000003994) #14 SPI1 (ENSPMRG00000004012) #15 MYBPC3 (ENSPMRG00000004475) #16 MADD (ENSPMRG00000008010) #17 NR1H3 (ENSPMRG00000011909) #18 ACP2 (ENSPMRG00000011917) #19 DDB2 (ENSPMRG00000011927) #20 PACSIN3 (ENSPMRG00000011938) #21 ENSPMRG00000011947 ARFGAP2 (ENSPMRG00000011954) #22 CSTPP1 (ENSPMRG00000011967) #23 LRP4 (ENSPMRG00000012004) #24 CKAP5 (ENSPMRG00000012212) #25 ENSPMRG00000012267 ZNF408 (ENSPMRG00000012272) #27 ARHGAP1 (ENSPMRG00000012280) #28 ATG13 (ENSPMRG00000012377) #30 HARBI1 (ENSPMRG00000012436) #31 AMBRA1 (ENSPMRG00000012441) #32 CHRM4 (ENSPMRG00000012456) #33 MDK (ENSPMRG00000012465) #34 ENSPMRG00000012478 DGKZ (ENSPMRG00000012726) #36 CREB3L1 (ENSPMRG00000014591) #37 PHF21A (ENSPMRG00000014609) Argentine black and white tegu MODERN SPECIES 3 NDUFS3 (ENSSMRG00000006342) #8 KBTBD4 (ENSSMRG00000006338) #9 PTPMT1 (ENSSMRG00000006333) #10 CELF1 (ENSSMRG00000006315) #11 RAPSN (ENSSMRG00000006301) #12 PSMC3 (ENSSMRG00000006278) #13 ENSSMRG00000006277 SLC39A13 (ENSSMRG00000006274) #14 SPI1 (ENSSMRG00000006272) #15 MYBPC3 (ENSSMRG00000006219) #16 MADD (ENSSMRG00000006111) #17 NR1H3 (ENSSMRG00000006068) #18 ACP2 (ENSSMRG00000006020) #19 DDB2 (ENSSMRG00000006012) #20 PACSIN3 (ENSSMRG00000006009) #21 ARFGAP2 (ENSSMRG00000006004) #22 CSTPP1 (ENSSMRG00000006000) #23 LRP4 (ENSSMRG00000005929) #24 CKAP5 (ENSSMRG00000005833) #25 ENSSMRG00000005831 ZNF408 (ENSSMRG00000005829) #27 ARHGAP1 (ENSSMRG00000005826) #28 ATG13 (ENSSMRG00000005818) #30 HARBI1 (ENSSMRG00000005723) #31 AMBRA1 (ENSSMRG00000005709) #32 CHRM4 (ENSSMRG00000005613) #33 MDK (ENSSMRG00000005607) #34 DGKZ (ENSSMRG00000005548) #36 CREB3L1 (ENSSMRG00000005539) #37 PHF21A (ENSSMRG00000005500) LARGE2 (ENSSMRG00000005495) Toxicofera ANCESTRAL SPECIES 5 ENSGT00940000158775 #9 ENSGT00390000014065 #10 ENSGT00940000158970 #11 ENSGT00390000016785 #12 ENSGT01020000230346.E #13 ENSGT00390000015299.a.b.a ENSGT00940000157349 #14 ENSGT00940000159754 #15 ENSGT00940000157698.b #16 ENSGT00940000156718 #17 ENSGT00940000159068 #18 ENSGT00940000158446.bb #19 ENSGT00510000047881 #20 ENSGT00950000182973.b.a #21 ENSGT00940000161474.b ENSGT00940000155568 #22 ENSGT00390000012935 #23 ENSGT00960000189374 ENSGT00940000158287 #24 ENSGT00390000014757.g #25 ENSGT00940000164059 ENSGT00930000151062 #27 ENSGT00940000160630 #28 ENSGT00390000007055 #30 ENSGT00940000154348.c.b.a #31 ENSGT00390000016223 #32 ENSGT00940000160394.a #33 ENSGT00390000007640.b #34 ENSGT00940000156152 #36 ENSGT00940000159848 #37 ENSGT00940000156124 Elapidae ANCESTRAL SPECIES 3 ENSGT00390000017480 #8 ENSGT00940000158775 #9 ENSGT00390000014065 #10 ENSGT00940000158970 #11 ENSGT00390000016785 #12 ENSGT01020000230346.E #13 ENSGT00390000015299.a.b.a ENSGT00940000157349 #14 ENSGT00940000159754 #15 ENSGT00940000157698.b #16 ENSGT00940000156718 #17 ENSGT00940000159068 #18 ENSGT00940000158446.bb #19 ENSGT00510000047881 #20 ENSGT00950000182973.b.a #21 ENSGT00940000155568 #22 ENSGT00390000012935 #23 ENSGT00960000189374 ENSGT00940000158287 #24 ENSGT00390000014757.g #25 ENSGT00930000151062 #27 ENSGT00940000164059 ENSGT00940000160630 #28 ENSGT00390000007055 #30 ENSGT00940000154348.c.b.a #31 ENSGT00390000016223 #32 ENSGT00940000160394.a #33 ENSGT00390000007640.b #34 ENSGT00940000156152 #36 ENSGT00940000159848 #37 ENSGT00940000156124 Elapidae_a ANCESTRAL SPECIES 4 ENSGT00390000017480.a #8 ENSGT00940000158775 #9 ENSGT00390000014065 #10 ENSGT00940000158970 #11 ENSGT00390000016785 #12 ENSGT01020000230346.E #13 ENSGT00390000015299.a.b.a ENSGT00940000157349 #14 ENSGT00940000159754 #15 ENSGT00940000157698.b #16 ENSGT00940000156718 #17 ENSGT00940000159068 #18 ENSGT00940000158446.bb #19 ENSGT00510000047881 #20 ENSGT00950000182973.b.a #21 ENSGT00940000155568 #22 ENSGT00390000012935 #23 ENSGT00960000189374 ENSGT00940000158287 #24 ENSGT00390000014757.g #25 ENSGT00940000164059 ENSGT00940000160630 #28 ENSGT00390000007055 #30 ENSGT00940000154348.c.b.a #31 ENSGT00390000016223 #32 ENSGT00940000160394.a #33 ENSGT00390000007640.b #34 ENSGT00940000156152 #36 ENSGT00940000159848 #37 ENSGT00940000156124 ENSGT00940000158758 Acanthophiinae ANCESTRAL SPECIES 6 ENSGT00390000017480.a #8 ENSGT00940000158775 #9 ENSGT00390000014065 #10 ENSGT00940000158970 #11 ENSGT00390000016785 #12 ENSGT01020000230346.E #13 ENSGT00390000015299.a.b.a ENSGT00940000157349 #14 ENSGT00940000159754 #15 ENSGT00940000157698.b #16 ENSGT00940000156718 #17 ENSGT00940000159068 #18 ENSGT00940000158446.bb #19 ENSGT00510000047881 #20 ENSGT00950000182973.b.a #21 ENSGT00940000155568 #22 ENSGT00390000012935 #23 ENSGT00960000189374 ENSGT00940000158287 #24 ENSGT00390000014757.g #25 ENSGT00940000164059 ENSGT00940000160630 #28 ENSGT00390000007055 #30 ENSGT00940000154348.c.b.a #31 ENSGT00390000016223 #32 ENSGT00940000160394.a #33 ENSGT00390000007640.b #34 ENSGT00940000156152 #36 ENSGT00940000159848 #37 ENSGT00940000156124 ENSGT00940000158758 Eastern brown snake MODERN SPECIES 1 ENSPTXG00000012045 #8 KBTBD4 (ENSPTXG00000012043) #9 PTPMT1 (ENSPTXG00000012042) #10 CELF1 (ENSPTXG00000012038) #11 RAPSN (ENSPTXG00000012021) #12 PSMC3 (ENSPTXG00000012020) #13 ENSPTXG00000012019 SLC39A13 (ENSPTXG00000012018) #14 SPI1 (ENSPTXG00000012017) #15 MYBPC3 (ENSPTXG00000012012) #16 MADD (ENSPTXG00000011997) #17 NR1H3 (ENSPTXG00000011996) #18 ACP2 (ENSPTXG00000011995) #19 DDB2 (ENSPTXG00000011994) #20 PACSIN3 (ENSPTXG00000011992) #21 ARFGAP2 (ENSPTXG00000011989) #22 CSTPP1 (ENSPTXG00000011967) #23 LRP4 (ENSPTXG00000011966) #24 CKAP5 (ENSPTXG00000011950) #25 ENSPTXG00000011946 ARHGAP1 (ENSPTXG00000011944) #28 ATG13 (ENSPTXG00000011942) #30 HARBI1 (ENSPTXG00000011941) #31 AMBRA1 (ENSPTXG00000011938) #32 CHRM4 (ENSPTXG00000011936) #33 MDK (ENSPTXG00000011934) #34 DGKZ (ENSPTXG00000008729) #36 CREB3L1 (ENSPTXG00000008716) #37 PHF21A (ENSPTXG00000008714) LARGE2 (ENSPTXG00000008713) PEX16 (ENSPTXG00000008712) Mainland tiger snake MODERN SPECIES 36 NDUFS3 (ENSNSUG00000017710) #8 KBTBD4 (ENSNSUG00000017712) #9 PTPMT1 (ENSNSUG00000017713) #10 CELF1 (ENSNSUG00000017714) #11 RAPSN (ENSNSUG00000017715) #12 PSMC3 (ENSNSUG00000017716) #13 ENSNSUG00000017717 SLC39A13 (ENSNSUG00000017718) #14 SPI1 (ENSNSUG00000017719) #15 MYBPC3 (ENSNSUG00000017720) #16 MADD (ENSNSUG00000017721) #17 NR1H3 (ENSNSUG00000017722) #18 ACP2 (ENSNSUG00000017723) #19 DDB2 (ENSNSUG00000017724) #20 PACSIN3 (ENSNSUG00000017725) #21 ARFGAP2 (ENSNSUG00000017726) #22 CSTPP1 (ENSNSUG00000017812) #23 ENSNSUG00000017813 LRP4 (ENSNSUG00000017814) #24 CKAP5 (ENSNSUG00000017815) #25 ENSNSUG00000017817 ARHGAP1 (ENSNSUG00000017818) #28 ATG13 (ENSNSUG00000017819) #30 HARBI1 (ENSNSUG00000017831) #31 AMBRA1 (ENSNSUG00000017836) #32 CHRM4 (ENSNSUG00000017843) #33 MDK (ENSNSUG00000017844) #34 DGKZ (ENSNSUG00000017845) #36 CREB3L1 (ENSNSUG00000018219) #37 PHF21A (ENSNSUG00000018220) LARGE2 (ENSNSUG00000018294) Blue-lipped sea krait MODERN SPECIES 7622 PACSIN3 (ENSLLTG00000005384) #21 ARFGAP2 (ENSLLTG00000005345) #22 CSTPP1 (ENSLLTG00000005333) #23 Indian cobra MODERN SPECIES NDUFS3 (ENSNNAG00000007881) #8 KBTBD4 (ENSNNAG00000007860) #9 PTPMT1 (ENSNNAG00000007839) #10 CELF1 (ENSNNAG00000007686) #11 RAPSN (ENSNNAG00000007663) #12 PSMC3 (ENSNNAG00000007548) #13 ENSNNAG00000007492 SLC39A13 (ENSNNAG00000007477) #14 SPI1 (ENSNNAG00000007464) #15 MYBPC3 (ENSNNAG00000007372) #16 MADD (ENSNNAG00000006994) #17 NR1H3 (ENSNNAG00000006918) #18 ACP2 (ENSNNAG00000006887) #19 DDB2 (ENSNNAG00000006863) #20 PACSIN3 (ENSNNAG00000006783) #21 ARFGAP2 (ENSNNAG00000006716) #22 CSTPP1 (ENSNNAG00000016196) #23 ENSNNAG00000016189 LRP4 (ENSNNAG00000016125) #24 CKAP5 (ENSNNAG00000012822) #25 ENSNNAG00000012596 #27 ENSNNAG00000012433 ARHGAP1 (ENSNNAG00000012386) #28 ATG13 (ENSNNAG00000012104) #30 HARBI1 (ENSNNAG00000012072) #31 AMBRA1 (ENSNNAG00000011933) #32 CHRM4 (ENSNNAG00000011899) #33 MDK (ENSNNAG00000011865) #34 DGKZ (ENSNNAG00000011459) #36 CREB3L1 (ENSNNAG00000011364) #37 ENSNNAG00000011351 Lizard DUPLICATION Lizard DUPLICATION Lizard DUPLICATION Lizard DUPLICATION Lizard DUPLICATION Lizard DUPLICATION Lizard DUPLICATION Lizard DUPLICATION Lizard MODERN SPECIES 4 PTPRZ1 (ENSACAG00000006803) FAM3C (ENSACAG00000039015) WNT16 (ENSACAG00000006979) ENSACAG00000042835 ENSACAG00000038723 TAFA5 (ENSACAG00000041810) ENSACAG00000034745 ENSACAG00000040433 ENSACAG00000044714 ENSACAG00000043588 ENSACAG00000045323 ENSACAG00000045555 TBC1D22A (ENSACAG00000004028) CERK (ENSACAG00000004135) GRAMD4 (ENSACAG00000004218) ENSACAG00000044432 #22 KLB (ENSACAG00000007623) RFC1 (ENSACAG00000007579) WDR19 (ENSACAG00000007508) KLHL5 (ENSACAG00000007412) CCDC149 (ENSACAG00000000382) ENSACAG00000000410 DHX15 (ENSACAG00000000412) ENSACAG00000041740 ENSACAG00000028853 ENSACAG00000035171 PPARGC1A (ENSACAG00000000741) GBA3 (ENSACAG00000001008) ADGRA3 (ENSACAG00000001047) ENSACAG00000035774 ENSACAG00000039647 Lizard MODERN SPECIES 1334 ENSACAG00000040602 ENSACAG00000045192 ENSACAG00000044862 ENSACAG00000038016 ENSACAG00000014018 ENSACAG00000003551 ENSACAG00000003564 ENSACAG00000036762 #22 Lizard MODERN SPECIES 2 ENSACAG00000044180 CADM2 (ENSACAG00000013590) ENSACAG00000042748 ENSACAG00000038175 ENSACAG00000043402 ENSACAG00000041385 ENSACAG00000038574 ENSACAG00000039962 ENSACAG00000045019 ENSACAG00000044266 ENSACAG00000040198 ENSACAG00000045505 ENSACAG00000040606 ENSACAG00000037202 ENSACAG00000026101 ENSACAG00000036353 #22 ENSACAG00000037563 ENSACAG00000040994 ENSACAG00000042905 ENSACAG00000002172 ENSACAG00000036177 ENSACAG00000044428 ENSACAG00000044355 ENSACAG00000044700 ENSACAG00000044726 ENSACAG00000044640 ENSACAG00000038039 ENSACAG00000036433 ENSACAG00000001739 ENSACAG00000042050 USP25 (ENSACAG00000010500) Lizard MODERN SPECIES 3 ENSACAG00000023847 ENSACAG00000043135 FOXA2 (ENSACAG00000012163) PAX1 (ENSACAG00000010563) NKX2-2 (ENSACAG00000005697) XRN2 (ENSACAG00000005565) KIZ (ENSACAG00000028994) ENSACAG00000029173 RALGAPA2 (ENSACAG00000005439) CFAP61 (ENSACAG00000005383) ENSACAG00000042716 CRNKL1 (ENSACAG00000005284) NAA20 (ENSACAG00000005272) RIN2 (ENSACAG00000005226) ENSACAG00000041292 ENSACAG00000042539 #22 SLC24A3 (ENSACAG00000005176) SCP2D1 (ENSACAG00000045395) DTD1 (ENSACAG00000007143) SEC23B (ENSACAG00000007168) ENSACAG00000001510 AFAP1 (ENSACAG00000001533) ENSACAG00000003928 SORCS2 (ENSACAG00000001646) GRPEL1 (ENSACAG00000002048) TADA2B (ENSACAG00000002074) ENSACAG00000002076 KIAA0232 (ENSACAG00000002090) ENSACAG00000002137 ENSACAG00000043038 ENSACAG00000038413 Lizard MODERN SPECIES 2 ENSACAG00000036140 ENSACAG00000000465 ENSACAG00000035161 ENSACAG00000045284 ENSACAG00000036663 ENSACAG00000034989 ENSACAG00000037377 ENSACAG00000040714 ENSACAG00000036026 GPC6 (ENSACAG00000002715) ENSACAG00000002630 TGDS (ENSACAG00000002532) GPR180 (ENSACAG00000002500) SOX21 (ENSACAG00000002492) ABCC4 (ENSACAG00000002058) ENSACAG00000043030 #22 CLDN10 (ENSACAG00000001996) DZIP1 (ENSACAG00000001944) DNAJC3 (ENSACAG00000001832) UGGT2 (ENSACAG00000001422) ENSACAG00000038010 HS6ST3 (ENSACAG00000001133) ENSACAG00000001129 ENSACAG00000027813 ENSACAG00000044385 MBNL2 (ENSACAG00000000969) ENSACAG00000044831 RAP2A (ENSACAG00000041592) SLAIN1 (ENSACAG00000000948) MYCBP2 (ENSACAG00000000646) FBXL3 (ENSACAG00000000608) Lizard MODERN SPECIES 2 ENSACAG00000042607 ENSACAG00000028550 ENSACAG00000004385 ENSACAG00000037421 ENSACAG00000037965 SLITRK6 (ENSACAG00000004440) ENSACAG00000045093 ENSACAG00000038695 SLITRK1 (ENSACAG00000000332) ENSACAG00000045471 ENSACAG00000040922 ENSACAG00000037998 ENSACAG00000012756 ENSACAG00000041006 ENSACAG00000043339 ENSACAG00000035699 #22 SPRY2 (ENSACAG00000016066) ENSACAG00000036149 NDFIP2 (ENSACAG00000037724) RBM26 (ENSACAG00000016128) ENSACAG00000042904 OBI1 (ENSACAG00000016170) POU4F1 (ENSACAG00000016185) ENSACAG00000040162 ENSACAG00000044069 EDNRB (ENSACAG00000016202) ENSACAG00000038382 ENSACAG00000024915 IPO5 (ENSACAG00000016245) FARP1 (ENSACAG00000016396) STK24 (ENSACAG00000016454) Lizard MODERN SPECIES 4 POC1B (ENSACAG00000011905) DUSP6 (ENSACAG00000011871) KITLG (ENSACAG00000029213) ENSACAG00000042327 TMTC3 (ENSACAG00000011675) CEP290 (ENSACAG00000011324) C12orf29 (ENSACAG00000011252) C12orf50 (ENSACAG00000011191) MGAT4C (ENSACAG00000044580) NTS (ENSACAG00000011152) RASSF9 (ENSACAG00000038394) ENSACAG00000044352 ALX1 (ENSACAG00000011108) ENSACAG00000011087 SLC6A15 (ENSACAG00000010944) ENSACAG00000005259 #22 ENSACAG00000042686 TMTC2 (ENSACAG00000014731) ENSACAG00000034859 ENSACAG00000044939 METTL25 (ENSACAG00000014713) ENSACAG00000014707 PPFIA2 (ENSACAG00000014550) ENSACAG00000039448 ACSS3 (ENSACAG00000014473) LIN7A (ENSACAG00000014452) MYF5 (ENSACAG00000014431) MYF6 (ENSACAG00000042468) PTPRQ (ENSACAG00000014272) OTOGL (ENSACAG00000014205) ENSACAG00000014176 Lizard MODERN SPECIES RAPSN (ENSACAG00000002242) #12 PSMC3 (ENSACAG00000002289) #13 ENSACAG00000041621 SLC39A13 (ENSACAG00000002440) #14 SPI1 (ENSACAG00000035887) #15 MYBPC3 (ENSACAG00000002510) #16 ENSACAG00000043000 ENSACAG00000042190 MADD (ENSACAG00000002771) #17 NR1H3 (ENSACAG00000002940) #18 ACP2 (ENSACAG00000003028) #19 DDB2 (ENSACAG00000003132) #20 PACSIN3 (ENSACAG00000003162) #21 ENSACAG00000003234 ENSACAG00000040032 #22 ENSACAG00000003243 #22 CSTPP1 (ENSACAG00000003280) #23 LRP4 (ENSACAG00000003321) #24 CKAP5 (ENSACAG00000029651) #25 ENSACAG00000003853 ZNF408 (ENSACAG00000003860) #27 ARHGAP1 (ENSACAG00000003876) #28 ATG13 (ENSACAG00000003943) #30 HARBI1 (ENSACAG00000004077) #31 AMBRA1 (ENSACAG00000004085) #32 CHRM4 (ENSACAG00000004120) #33 MDK (ENSACAG00000041148) #34 ENSACAG00000041893 DGKZ (ENSACAG00000004171) #36 CREB3L1 (ENSACAG00000004538) #37 ENSACAG00000037436 Lizard MODERN SPECIES ENSACAG00000037762 RAPSN (ENSACAG00000002242) #12 PSMC3 (ENSACAG00000002289) #13 ENSACAG00000041621 SLC39A13 (ENSACAG00000002440) #14 SPI1 (ENSACAG00000035887) #15 MYBPC3 (ENSACAG00000002510) #16 ENSACAG00000043000 ENSACAG00000042190 MADD (ENSACAG00000002771) #17 NR1H3 (ENSACAG00000002940) #18 ACP2 (ENSACAG00000003028) #19 DDB2 (ENSACAG00000003132) #20 PACSIN3 (ENSACAG00000003162) #21 ENSACAG00000003234 ENSACAG00000040032 #22 ENSACAG00000003243 #22 CSTPP1 (ENSACAG00000003280) #23 LRP4 (ENSACAG00000003321) #24 CKAP5 (ENSACAG00000029651) #25 ENSACAG00000003853 ZNF408 (ENSACAG00000003860) #27 ARHGAP1 (ENSACAG00000003876) #28 ATG13 (ENSACAG00000003943) #30 HARBI1 (ENSACAG00000004077) #31 AMBRA1 (ENSACAG00000004085) #32 CHRM4 (ENSACAG00000004120) #33 MDK (ENSACAG00000041148) #34 ENSACAG00000041893 DGKZ (ENSACAG00000004171) #36 CREB3L1 (ENSACAG00000004538) #37 Anura ANCESTRAL SPECIES 75 ENSGT00390000017480 #8 ENSGT00940000158775 #9 ENSGT00390000014065 #10 ENSGT00940000158970 #11 ENSGT00390000016785 #12 ENSGT00940000161051.b.g ENSGT01020000230346.E #13 ENSGT00390000015299.a.b.a ENSGT00940000157349 #14 ENSGT00940000159754 #15 ENSGT00940000157698.b #16 ENSGT00940000156718 #17 ENSGT00940000158446 #19 ENSGT00510000047881 #20 ENSGT00950000182973.b.a #21 ENSGT00940000155568 #22 ENSGT00940000165402 ENSGT00390000012935 #23 ENSGT00940000158287 #24 ENSGT00390000014757 #25 ENSGT00940000164059 ENSGT00930000151062 #27 ENSGT00940000160630 #28 ENSGT01030000234629.E.b ENSGT00390000007055 #30 ENSGT00940000154348.c.b.a #31 ENSGT00390000016223 #32 ENSGT00940000160394.a #33 ENSGT00390000007640.b #34 ENSGT00940000156152 #36 ENSGT00940000159848 #37 Leishan spiny toad MODERN SPECIES 1 PTPMT1 (ENSLLEG00000024438) #10 CELF1 (ENSLLEG00000023639) #11 RAPSN (ENSLLEG00000023499) #12 ENSLLEG00000023282 PSMC3 (ENSLLEG00000022403) #13 ENSLLEG00000022209 ENSLLEG00000022137 SLC39A13 (ENSLLEG00000022034) #14 ENSLLEG00000022001 SPI1 (ENSLLEG00000021892) #15 MYBPC3 (ENSLLEG00000015296) #16 MADD (ENSLLEG00000013247) #17 ACP2 (ENSLLEG00000013054) #19 DDB2 (ENSLLEG00000012938) #20 PACSIN3 (ENSLLEG00000012543) #21 ENSLLEG00000012474 #22 ENSLLEG00000012427 CSTPP1 (ENSLLEG00000012343) #23 LRP4 (ENSLLEG00000011330) #24 CKAP5 (ENSLLEG00000009276) #25 ENSLLEG00000008894 ZNF408 (ENSLLEG00000008856) #27 ARHGAP1 (ENSLLEG00000008726) #28 ENSLLEG00000025519 ATG13 (ENSLLEG00000025414) #30 HARBI1 (ENSLLEG00000025377) #31 ENSLLEG00000025363 AMBRA1 (ENSLLEG00000025123) #32 ENSLLEG00000025086 CHRM4 (ENSLLEG00000025061) #33 DGKZ (ENSLLEG00000024009) #36 Frog MODERN SPECIES 4 ckap5 (ENSXETG00000001986) #25 lto1 (ENSXETG00000041041) fgf19 (ENSXETG00000037561) fgf4 (ENSXETG00000037755) fgf3 (ENSXETG00000048681) ENSXETG00000047081 ano1 (ENSXETG00000001994) ENSXETG00000041160 ENSXETG00000045701 ENSXETG00000041678 XB5917669 [provisional] (ENSXETG00000044053) ENSXETG00000039627 ENSXETG00000047843 ENSXETG00000035346 ENSXETG00000040384 arfgap2 (ENSXETG00000005097) #22 ENSXETG00000047305 XB5902317 [provisional:ces1c] (ENSXETG00000026362) lrp4 (ENSXETG00000005091) #24 pacsin3 (ENSXETG00000005090) #21 cat.3 (ENSXETG00000048405) cat.1 (ENSXETG00000007561) elf5 (ENSXETG00000007560) ehf (ENSXETG00000007559) apip (ENSXETG00000007558) pdhx (ENSXETG00000007557) cd44 (ENSXETG00000007556) slc1a2 (ENSXETG00000007555) pamr1 (ENSXETG00000007554) ##26 fjx1 (ENSXETG00000047230) ENSXETG00000047544 Coelacanth MODERN SPECIES 229 znf408 (ENSLACG00000018810) #27 ENSLACG00000018813 #25 ckap5 (ENSLACG00000018814) #25 LRP4 (ENSLACG00000018826) #24 CSTPP1 (ENSLACG00000018885) #23 ENSLACG00000018896 PSMC3 (ENSLACG00000018899) #13 ENSLACG00000018907 SLC39A13 (ENSLACG00000018915) #14 SPI1 (ENSLACG00000018937) #15 MYBPC3 (ENSLACG00000018941) #16 MADD (ENSLACG00000018949) #17 NR1H3 (ENSLACG00000018964) #18 ACP2 (ENSLACG00000018968) #19 PACSIN3 (ENSLACG00000018971) #21 ARFGAP2 (ENSLACG00000018982) #22 ENSLACG00000018983 ENSLACG00000018985 RAPSN (ENSLACG00000018987) #12 CELF1 (ENSLACG00000018990) #11 PTPMT1 (ENSLACG00000018994) #10 KBTBD4 (ENSLACG00000018996) #9 NDUFS3 (ENSLACG00000018998) #8 C1QTNF4 (ENSLACG00000019002) #7 npsn (ENSLACG00000019008) NUP160 (ENSLACG00000019014) MTCH2 (ENSLACG00000019019) ENSLACG00000019022 AGBL2 (ENSLACG00000019026) FNBP4 (ENSLACG00000019029) Actinopterygii ANCESTRAL SPECIES 12 ENSGT00930000151062 #27 ENSGT00940000164059 ENSGT00940000160630 #28 ENSGT01030000234629.E.b ENSGT00390000007055 #30 ENSGT00940000154348.c.b.a #31 ENSGT00940000156124 ENSGT00940000159848 #37 ENSGT00940000156152.e.a #36 ENSGT00390000007640.b #34 ENSGT00940000160394.a #33 ENSGT00390000016223 #32 ENSGT00940000158446 #19 ENSGT00510000047881 #20 ENSGT00950000182973.b.a #21 ENSGT00940000155568 #22 ENSGT00940000165402 ENSGT00390000017790 ENSGT00940000158758 ENSGT00390000000417.a.b ENSGT00390000010152 ENSGT00940000159763 ENSGT00940000157816.a.b ENSGT00940000166897 ENSGT00940000160601 ENSGT00940000158825 ENSGT00940000161128 ENSGT01090000260003.a.a ENSGT00940000157182 ENSGT00390000002105 ENSGT01050000244900.a.a.b Reedfish MODERN SPECIES 10 PRDM11 (ENSECRG00000004618) znf408 (ENSECRG00000004627) #27 f2 (ENSECRG00000004654) arhgap1 (ENSECRG00000004708) #28 ENSECRG00000004727 atg13 (ENSECRG00000004754) #30 phf21aa (ENSECRG00000004815) creb3l1 (ENSECRG00000004835) #37 DGKZ (ENSECRG00000004862) #36 mdkb (ENSECRG00000004892) #34 CHRM4 (ENSECRG00000004899) #33 ambra1a (ENSECRG00000004903) #32 acp2 (ENSECRG00000004918) #19 ddb2 (ENSECRG00000004932) #20 pacsin3 (ENSECRG00000004954) #21 arfgap2 (ENSECRG00000004974) #22 ENSECRG00000005001 pex16 (ENSECRG00000005013) large2 (ENSECRG00000005025) ENSECRG00000005040 ENSECRG00000005054 ENSECRG00000005065 ENSECRG00000005075 ENSECRG00000005081 macroh2a2 (ENSECRG00000005092) ENSECRG00000005101 sgpl1 (ENSECRG00000005118) pcbd1 (ENSECRG00000005135) tkfc (ENSECRG00000005160) cyb561a3a (ENSECRG00000005181) tmem138 (ENSECRG00000005186) Neopterygii ANCESTRAL SPECIES 4 ENSGT00940000164059 ENSGT00940000160630 #28 ENSGT01030000234629.E.b ENSGT00390000007055 #30 ENSGT00940000154348.c.b.a #31 ENSGT00940000166946 ENSGT00940000156124 ENSGT00940000159848 #37 ENSGT00940000156152.e.a #36 ENSGT00390000007640.b #34 ENSGT00940000160394.a #33 ENSGT00390000016223 #32 ENSGT00940000158446 #19 ENSGT00510000047881 #20 ENSGT00950000182973.b.a #21 ENSGT00940000155568 #22 ENSGT00940000165402 ENSGT00390000017790 ENSGT00940000158758 ENSGT00390000000417.a.b ENSGT00390000010152 ENSGT00940000159763 ENSGT00940000157816.a.b ENSGT00940000166897 ENSGT00940000160601 ENSGT00940000158825 ENSGT00940000161128 ENSGT00940000157182 ENSGT00390000002105 ENSGT01050000244900.a.a.b ENSGT00940000158565 Spotted gar MODERN SPECIES 666 f2 (ENSLOCG00000005730) arhgap1 (ENSLOCG00000005713) #28 ENSLOCG00000005694 atg13 (ENSLOCG00000005677) #30 harbi1 (ENSLOCG00000005661) #31 zgc:110699 (ENSLOCG00000005631) phf21aa (ENSLOCG00000005618) creb3l1 (ENSLOCG00000005600) #37 DGKZ (ENSLOCG00000005570) #36 mdkb (ENSLOCG00000005557) #34 CHRM4 (ENSLOCG00000005536) #33 ambra1a (ENSLOCG00000005523) #32 acp2 (ENSLOCG00000005499) #19 ddb2 (ENSLOCG00000005486) #20 pacsin3 (ENSLOCG00000005453) #21 arfgap2 (ENSLOCG00000005421) #22 ENSLOCG00000005410 pex16 (ENSLOCG00000005389) chst1 (ENSLOCG00000017322) zgc:101566 (ENSLOCG00000005326) ENSLOCG00000005304 ENSLOCG00000005294 acte1 (ENSLOCG00000005275) shank2b (ENSLOCG00000005253) CTTN (ENSLOCG00000005239) ppfia1 (ENSLOCG00000005197) FADD (ENSLOCG00000005182) ano1a (ENSLOCG00000005155) zgc:153993 (ENSLOCG00000005142) fgf3 (ENSLOCG00000005127) fgf4 (ENSLOCG00000005119) Osteoglossocephalai ANCESTRAL SPECIES 81 ENSGT00940000155568 #22 ENSGT00940000165402 ENSGT00390000017790 ENSGT00940000158758 ENSGT00390000000417.a.b ENSGT00390000010152 ENSGT00940000159763 ENSGT00940000157816.a.b ENSGT00940000166897 ENSGT00940000160601 ENSGT00940000158825 ENSGT00940000161128 ENSGT00940000157182.g.a ENSGT01090000260003.a.a ENSGT00940000157182.g.b ENSGT00390000002105 Osteoglossiformes ANCESTRAL SPECIES 757 ENSGT00940000155568 #22 ENSGT00940000165402 Asian bonytongue MODERN SPECIES 22 phf21aa (ENSSFOG00015019755) zgc:110699 (ENSSFOG00015029583) atg13 (ENSSFOG00015019823) #30 ENSSFOG00015019940 SYT13 (ENSSFOG00015024876) fbxo3 (ENSSFOG00015019965) ENSSFOG00015019991 ENSSFOG00015027821 aplnr2 (ENSSFOG00015025805) tmem17 (ENSSFOG00015020031) psmc3 (ENSSFOG00015020046) #13 mtch2 (ENSSFOG00015020075) fnbp4 (ENSSFOG00015020087) nup160 (ENSSFOG00015020108) npsn (ENSSFOG00015020194) arfgap2 (ENSSFOG00015020216) #22 ENSSFOG00015020264 large2 (ENSSFOG00015020290) thraa (ENSSFOG00015024188) DHX8 (ENSSFOG00015024187) etv4 (ENSSFOG00015024186) ENSSFOG00015029737 meox1 (ENSSFOG00015024185) SOST (ENSSFOG00015028325) ENSSFOG00015017054 ENSSFOG00015025744 aldh1a2 (ENSSFOG00015014089) lipca (ENSSFOG00015014124) ENSSFOG00015014145 rnf111 (ENSSFOG00015014203) ccnb2 (ENSSFOG00015014264) P. kingsleyae MODERN SPECIES 23 ENSPKIG00000004656 slc10a3 (ENSPKIG00000004672) chmp1a (ENSPKIG00000004700) vps4a (ENSPKIG00000004735) SNTB2 (ENSPKIG00000004785) spire2 (ENSPKIG00000004842) chst6 (ENSPKIG00000004884) ENSPKIG00000004897 GABARAPL2 (ENSPKIG00000004911) adat1 (ENSPKIG00000004925) wwp2 (ENSPKIG00000004994) ENSPKIG00000005174 MATCAP1 (ENSPKIG00000005210) polr2c (ENSPKIG00000005228) ENSPKIG00000005253 arfgap2 (ENSPKIG00000005287) #22 ENSPKIG00000005352 ENSPKIG00000005384 large2 (ENSPKIG00000005425) large2 (ENSPKIG00000005472) tpcn2 (ENSPKIG00000005532) ccnd1 (ENSPKIG00000005626) ccnd1 (ENSPKIG00000005639) fgf19 (ENSPKIG00000005648) fgf4 (ENSPKIG00000005656) fgf3 (ENSPKIG00000005674) zgc:153993 (ENSPKIG00000005684) ano1a (ENSPKIG00000005734) FADD (ENSPKIG00000005864) ENSPKIG00000005876 SPI1 (ENSPKIG00000005902) #15 Clupeocephala ANCESTRAL SPECIES 16 ENSGT00390000013315 ENSGT00940000161262.a ENSGT00390000013899.b ENSGT00940000157530.b.b ENSGT00940000157530.b.a ENSGT00390000013260.A.a ENSGT00940000165480.b ENSGT00940000165480.a ENSGT00730000111007.a.b ENSGT00940000164361 ENSGT00940000153561.b.a.a.b ENSGT00940000158565 ENSGT01050000244900.a.a.b ENSGT00940000163723.A.f.b ENSGT00940000163723.A.e ENSGT00940000155568 #22 ENSGT00940000165402 ENSGT00390000017790 ENSGT00940000158758 ENSGT00940000162283.b ENSGT00940000154022.a.a ENSGT00940000157918 ENSGT00390000008139 ENSGT00940000156252.pb.b ENSGT00880000138014.a ENSGT00940000158136 ENSGT00990000203752 ENSGT00940000161773 Euteleosteomorpha ANCESTRAL SPECIES 283 ENSGT00390000012935 #23 ENSGT00940000157089.A ENSGT00940000159073 ENSGT00390000013315 ENSGT00940000161262.a ENSGT00390000013899.b ENSGT00940000164361 ENSGT00940000153561.b.a.a.b ENSGT00940000158565 ENSGT01050000244900.a.a.b.eb ENSGT00940000163723.A.f.b ENSGT00940000163723.A.e ENSGT00940000155568 #22 ENSGT00390000017790 Protacanthopterygii ANCESTRAL SPECIES 101 ENSGT00940000158441 ENSGT00510000047412.b ENSGT00940000156422 ENSGT00390000011613 ENSGT00940000164068.a.b.a.a.a ENSGT00940000164068.a.b.b ENSGT00940000157938 ENSGT00940000157542 ENSGT00940000160441 ENSGT00940000154351 ENSGT00550000074952 ENSGT00940000158280 ENSGT01050000244900.a.a.b.eb ENSGT00940000163723.A.f.b ENSGT00940000163723.A.e ENSGT00940000155568 #22 ENSGT00390000017790 ENSGT00940000160333 ENSGT00390000006347.a ENSGT01060000248595.b.a.b.a.n.b ENSGT00940000154996.a.b.b ENSGT00940000164990.d ENSGT00940000161001 ENSGT00940000162677 ENSGT00940000160588 ENSGT00940000155426 ENSGT00940000166194.a.a ENSGT00390000006196 ENSGT00940000154860.a.a ENSGT00940000157405.c.b ENSGT00390000001680 Salmoninae ANCESTRAL SPECIES 1 ENSGT00510000047412.b ENSGT00940000156422.i ENSGT00940000156422.j ENSGT00390000011613 ENSGT00940000164068.a.b.a.a.a ENSGT00940000164068.a.b.b ENSGT00940000157938 ENSGT00940000157542 ENSGT00940000160441 ENSGT00940000154351 ENSGT00550000074952 ENSGT00940000158280.l ENSGT01050000244900.a.a.b.eb.h ENSGT00940000163723.A.f.b ENSGT00940000163723.A.e ENSGT00940000155568 #22 ENSGT00390000017790 ENSGT00940000160333 ENSGT00390000006347.a ENSGT01060000248595.b.a.b.a.n.b ENSGT00940000154996.a.b.b ENSGT00940000164990.d ENSGT00940000161001 ENSGT00940000162677.qc ENSGT00940000160588 ENSGT00940000155426 ENSGT00940000166194.a.a ENSGT00940000166194.a.b ENSGT00390000006196.k.b ENSGT00390000006196.l ENSGT00940000154860.a.a.d Huchen MODERN SPECIES 3237 arfgap2 (ENSHHUG00000024825) #22 pex16 (ENSHHUG00000024843) slc22a18 (ENSHHUG00000024869) cars1 (ENSHHUG00000024878) cpt1aa (ENSHHUG00000024941) Salmoninae_a ANCESTRAL SPECIES 85 ENSGT00940000156422.j ENSGT00390000011613 ENSGT00940000164068.a.b.a.a.a ENSGT00940000164068.a.b.b ENSGT00940000157938 ENSGT00940000157542 ENSGT00940000160441 ENSGT00940000154351 ENSGT00550000074952 ENSGT00940000158280.k ENSGT01050000244900.a.a.b.eb.g.a ENSGT00940000158280.l ENSGT01050000244900.a.a.b.eb.h ENSGT00940000163723.A.f.b ENSGT00940000163723.A.e ENSGT00940000155568 #22 ENSGT00390000017790 ENSGT00940000160333 ENSGT00390000006347.a.g.a ENSGT00390000006347.a.g.b ENSGT01060000248595.b.a.b.a.n.b ENSGT00940000154996.a.b.b ENSGT00940000164990.d ENSGT00940000161001 ENSGT00940000162677.qc.a ENSGT00940000160588.a ENSGT00940000162677.qc.b ENSGT00940000160588.b ENSGT00940000155426 ENSGT00940000166194.a.a ENSGT00940000166194.a.b Salmo DUPLICATION Salmo ANCESTRAL SPECIES 271 ENSGT00940000154351.`c ENSGT00550000074952.n ENSGT00940000158280.l ENSGT01050000244900.a.a.b.eb.g.b ENSGT01050000244900.a.a.b.eb.g.a.a ENSGT00940000163723.A.f.b.n ENSGT00940000163723.A.e.a ENSGT00940000155568.a #22 River trout MODERN SPECIES 21 pde8a (ENSSTUG00000006015) ENSSTUG00000007632 gatm (ENSSTUG00000007634) ENSSTUG00000007666 slc27a2a (ENSSTUG00000007988) hdc (ENSSTUG00000008064) ENSSTUG00000009007 USP8 (ENSSTUG00000009019) USP50 (ENSSTUG00000009048) mapk6 (ENSSTUG00000009095) tmod2 (ENSSTUG00000009120) ENSSTUG00000009200 ENSSTUG00000009226 ENSSTUG00000009241 ENSSTUG00000009257 arfgap2 (ENSSTUG00000009272) #22 pex16 (ENSSTUG00000009372) slc22a18 (ENSSTUG00000009401) cars1 (ENSSTUG00000009452) cpt1aa (ENSSTUG00000011258) lingo1b (ENSSTUG00000011940) kcnq1.1 (ENSSTUG00000011950) ENSSTUG00000012108 ENSSTUG00000012121 ENSSTUG00000012134 trpm5 (ENSSTUG00000012144) traf6 (ENSSTUG00000012206) ENSSTUG00000012217 ttc17 (ENSSTUG00000012270) hsd17b12b (ENSSTUG00000013517) ENSSTUG00000013536 Atlantic salmon MODERN SPECIES 18 pde8a (ENSSSAG00000094947) gatm (ENSSSAG00000055493) s27a2 (ENSSSAG00000115180) slc27a2a (ENSSSAG00000122085) hdc (ENSSSAG00000042330) ENSSSAG00000091356 ENSSSAG00000111698 ENSSSAG00000121071 USP50 (ENSSSAG00000110764) ENSSSAG00000055469 ENSSSAG00000116709 tmod2 (ENSSSAG00000060985) ENSSSAG00000055518 ENSSSAG00000005625 ENSSSAG00000076581 ENSSSAG00000086985 #22 ENSSSAG00000105914 ENSSSAG00000009760 ENSSSAG00000065651 ENSSSAG00000062476 ENSSSAG00000069709 ENSSSAG00000069738 CDN1C (ENSSSAG00000069801) ENSSSAG00000069803 ENSSSAG00000101306 ENSSSAG00000009850 ENSSSAG00000076731 ttc17 (ENSSSAG00000040540) hsd17b12b (ENSSSAG00000040461) ENSSSAG00000040431 ENSSSAG00000091855 Salmo ANCESTRAL SPECIES 138 ENSGT00940000158280.k ENSGT01050000244900.a.a.b.eb.g.a.b ENSGT00940000163723.A.f.b.m.a ENSGT00940000163723.A.e.b ENSGT00940000155568.b #22 ENSGT00390000017790 ENSGT00940000160333.f ENSGT00390000006347.a.g.b ENSGT01060000248595.b.a.b.a.n.b.e ENSGT00940000154996.a.b.b.c ENSGT00940000164990.d.f ENSGT00940000161001 ENSGT00940000162677.qc.a.a ENSGT00940000162677.qc.b ENSGT00940000160588.a ENSGT00940000155426 ENSGT00940000166194.a.a ENSGT00940000166194.a.b.a ENSGT00390000006196.k.a ENSGT00940000154860.a.a.d Atlantic salmon MODERN SPECIES 2 pde8a (ENSSSAG00000097988) gatm (ENSSSAG00000069650) ENSSSAG00000108011 slc27a2a (ENSSSAG00000012340) hdc (ENSSSAG00000098647) ENSSSAG00000093071 ENSSSAG00000009637 ENSSSAG00000010195 USP50 (ENSSSAG00000108441) mapk6 (ENSSSAG00000086103) leo1 (ENSSSAG00000110496) ENSSSAG00000088019 ENSSSAG00000118428 ENSSSAG00000089459 ENSSSAG00000108375 ENSSSAG00000098004 #22 ENSSSAG00000009752 s22ai (ENSSSAG00000039227) ENSSSAG00000044071 ENSSSAG00000070128 ENSSSAG00000089547 ENSSSAG00000088153 kcnq1.1 (ENSSSAG00000106722) ENSSSAG00000039155 ENSSSAG00000088474 ENSSSAG00000061221 ENSSSAG00000060456 ENSSSAG00000038776 ENSSSAG00000045767 ENSSSAG00000057376 chst1 (ENSSSAG00000095739) River trout MODERN SPECIES 3 aph1b (ENSSTUG00000002066) ENSSTUG00000002075 ENSSTUG00000002080 NR2E3 (ENSSTUG00000002100) arih1l (ENSSTUG00000002114) HACD3 (ENSSTUG00000002183) SLC24A1 (ENSSTUG00000002229) dennd4a (ENSSTUG00000002300) rab11a (ENSSTUG00000004309) ENSSTUG00000004325 leo1 (ENSSTUG00000004341) tmod2 (ENSSTUG00000004523) ppfia1 (ENSSTUG00000004645) ENSSTUG00000007012 ENSSTUG00000007041 arfgap2 (ENSSTUG00000007061) #22 pex16 (ENSSTUG00000007120) slc22a18 (ENSSTUG00000007145) cars1 (ENSSTUG00000007209) cpt1aa (ENSSTUG00000008905) lingo1b (ENSSTUG00000009375) kcnq1.1 (ENSSTUG00000009396) ENSSTUG00000009667 ENSSTUG00000009677 trpm5 (ENSSTUG00000009687) traf6 (ENSSTUG00000009787) ENSSTUG00000009812 ENSSTUG00000009839 ENSSTUG00000009872 ttc17 (ENSSTUG00000009896) hsd17b12b (ENSSTUG00000010485) Oncorhynchus ANCESTRAL SPECIES ENSGT00510000046704.b.b.a ENSGT00940000158441 ENSGT00940000156422.i ENSGT00390000011613 ENSGT00940000164068.a.b.a.a.a ENSGT00940000157938.j.b ENSGT00940000163460.a.a.c.a.b ENSGT00940000157542 ENSGT00940000160441 ENSGT00940000154351 ENSGT00550000074952 ENSGT00940000158280.l ENSGT01050000244900.a.a.b.eb.h ENSGT00940000163723.A.f.b ENSGT00940000163723.A.e ENSGT00940000155568 #22 ENSGT01080000257714.b ENSGT00390000017790 ENSGT00940000160333 ENSGT00390000006347.a.g.b ENSGT01060000248595.b.a.b.a.n.b ENSGT00940000154996.a.b.b ENSGT00940000161001 ENSGT00940000162677.qc.a ENSGT00940000160588.a ENSGT00940000162677.qc.b ENSGT00940000160588.b ENSGT00940000155426 ENSGT00940000166194.a.a ENSGT00390000006196.l ENSGT00940000154860.a.a.d Rainbow trout DUPLICATION Rainbow trout MODERN SPECIES 27 pde8a (ENSOMYG00000074691) ENSOMYG00000060984 gatm (ENSOMYG00000058991) ENSOMYG00000073495 slc27a2a (ENSOMYG00000035881) hdc (ENSOMYG00000048576) ENSOMYG00000036605 ENSOMYG00000054987 USP50 (ENSOMYG00000004613) ENSOMYG00000004588 ENSOMYG00000024703 ENSOMYG00000073125 ENSOMYG00000004444 ENSOMYG00000053221 ENSOMYG00000003441 ENSOMYG00000003351 #22 ENSOMYG00000004192 ENSOMYG00000077260 ENSOMYG00000004018 ENSOMYG00000004278 ENSOMYG00000048968 ENSOMYG00000062919 ENSOMYG00000067852 ENSOMYG00000040589 trpm5 (ENSOMYG00000057858) ENSOMYG00000040541 ENSOMYG00000065809 ttc17 (ENSOMYG00000066781) hsd17b12b (ENSOMYG00000054352) ENSOMYG00000002918 ENSOMYG00000030570 Rainbow trout MODERN SPECIES 18 ENSOMYG00000054814 ENSOMYG00000075339 ENSOMYG00000040599 ENSOMYG00000059300 ENSOMYG00000056219 ENSOMYG00000070149 #22 ENSOMYG00000075009 ENSOMYG00000003304 ENSOMYG00000061645 ENSOMYG00000003245 ENSOMYG00000003006 ENSOMYG00000070044 ENSOMYG00000052355 ENSOMYG00000075306 ENSOMYG00000004371 ENSOMYG00000063833 ENSOMYG00000059707 ENSOMYG00000040579 ENSOMYG00000040562 ENSOMYG00000055804 ENSOMYG00000040584 Oncorhynchus_a ANCESTRAL SPECIES 106 ENSGT00510000046704.b.b.b ENSGT00940000158441 ENSGT00940000156422.i ENSGT00390000011613 ENSGT00940000164068.a.b.a.a.a ENSGT00940000157938.j.b ENSGT00940000163460.a.a.c.a.b ENSGT00940000157542 ENSGT00940000160441 ENSGT00940000154351 ENSGT00550000074952.k ENSGT00940000158280.l ENSGT01050000244900.a.a.b.eb.h ENSGT00940000163723.A.f.b ENSGT00940000163723.A.e ENSGT00940000155568 #22 ENSGT01080000257714.b ENSGT00390000017790 ENSGT00940000160333 ENSGT00390000006347.a.g.a Coho salmon DUPLICATION Coho salmon MODERN SPECIES 32 ENSOKIG00005040000 pde8a (ENSOKIG00005039876) gatm (ENSOKIG00005039835) ENSOKIG00005039108 hdc (ENSOKIG00005038039) ENSOKIG00005037965 ENSOKIG00005037954 ENSOKIG00005037888 USP50 (ENSOKIG00005037824) mapk6 (ENSOKIG00005037802) LEO1 (ENSOKIG00005037738) ENSOKIG00005037624 ENSOKIG00005036557 ENSOKIG00005036436 ENSOKIG00005036401 arfgap2 (ENSOKIG00005036260) #22 ENSOKIG00005036243 PEX16 (ENSOKIG00005036181) ENSOKIG00005036102 cars1 (ENSOKIG00005034427) ENSOKIG00005034291 ENSOKIG00005034266 ttc17 (ENSOKIG00005034171) ENSOKIG00005034040 TRAF6 (ENSOKIG00005034012) trpm5 (ENSOKIG00005033333) ENSOKIG00005033243 ENSOKIG00005033109 lingo1b (ENSOKIG00005033071) ENSOKIG00005031839 CHST1 (ENSOKIG00005031722) Coho salmon MODERN SPECIES 1287 leo1 (ENSOKIG00005047707) ENSOKIG00005047700 ppfia1 (ENSOKIG00005046198) ENSOKIG00005046077 ENSOKIG00005046063 ARFGAP2 (ENSOKIG00005046006) #22 pex16 (ENSOKIG00005045921) slc22a18 (ENSOKIG00005045912) CARS1 (ENSOKIG00005045699) cpt1aa (ENSOKIG00005044361) Chinook salmon MODERN SPECIES 28 arfgap2 (ENSOTSG00005018635) #22 slc22a18 (ENSOTSG00005018626) cars1 (ENSOTSG00005018579) ENSOTSG00005018566 ENSOTSG00005018565 morf4l1 (ENSOTSG00005018560) UACA (ENSOTSG00005018557) kif23 (ENSOTSG00005018551) paqr5a (ENSOTSG00005018550) cand1 (ENSOTSG00005018549) slc25a44b (ENSOTSG00005018532) ENSOTSG00005018521 OAZ2 (ENSOTSG00005018517) ENSOTSG00005018510 elp4 (ENSOTSG00005017552) abhd17c (ENSOTSG00005017548) Northern pike MODERN SPECIES 1 ENSELUG00000019658 ENSELUG00000019621 pde8a (ENSELUG00000019742) gatm (ENSELUG00000001472) slc27a2a (ENSELUG00000019801) hdc (ENSELUG00000019843) USP8 (ENSELUG00000019872) USP50 (ENSELUG00000019889) mapk6 (ENSELUG00000019924) leo1 (ENSELUG00000019983) tmod2 (ENSELUG00000020038) ppfia1 (ENSELUG00000020126) ENSELUG00000032105 ENSELUG00000020067 ENSELUG00000020152 arfgap2 (ENSELUG00000020186) #22 pex16 (ENSELUG00000020226) slc22a18 (ENSELUG00000020269) cars1 (ENSELUG00000020347) cpt1aa (ENSELUG00000020423) lingo1b (ENSELUG00000020454) kcnq1.1 (ENSELUG00000020500) ENSELUG00000020526 trpm5 (ENSELUG00000020566) traf6 (ENSELUG00000020636) ENSELUG00000020662 ENSELUG00000030198 ttc17 (ENSELUG00000020818) ENSELUG00000020845 ENSELUG00000020858 LRRC4C (ENSELUG00000031309) Acanthomorphata ANCESTRAL SPECIES 139 ENSGT00940000161238.l ENSGT00940000157661.e.b ENSGT00940000157462.C.c.a ENSGT00950000182839.B.b.a ENSGT00950000183205.a ENSGT00940000157530.b.a ENSGT00390000013260.A.a ENSGT00940000165480.b ENSGT00940000165480.a ENSGT00730000111007.a.b ENSGT00940000153561.b.a.a.b ENSGT00940000158565 ENSGT01050000244900.a.a.b.eb ENSGT00940000163723.A.f.b ENSGT00940000163723.A.e ENSGT00940000155568 #22 ENSGT00390000017790 ENSGT00390000006347.a ENSGT00940000155405 ENSGT00940000165890 ENSGT00940000157369.b ENSGT00390000005764 ENSGT00530000063106.B ENSGT00940000155333.A.a ENSGT00940000154914 Cod MODERN SPECIES 5 mcee (ENSGMOG00000012884) mphosph10 (ENSGMOG00000012875) ENSGMOG00000012868 ENSGMOG00000016135 ENSGMOG00000012783 #11 ENSGMOG00000010935 ENSGMOG00000010892 ENSGMOG00000029806 ENSGMOG00000022909 ENSGMOG00000028784 ENSGMOG00000010812 ENSGMOG00000018344 ENSGMOG00000033701 ENSGMOG00000005408 ENSGMOG00000014850 ENSGMOG00000014867 #22 ENSGMOG00000014900 ENSGMOG00000014942 ENSGMOG00000014993 crybgx (ENSGMOG00000015010) ENSGMOG00000015022 dis3l (ENSGMOG00000003012) ENSGMOG00000011768 ENSGMOG00000004096 ENSGMOG00000004071 ENSGMOG00000004049 ENSGMOG00000035369 ENSGMOG00000035938 ENSGMOG00000001565 cdh15 (ENSGMOG00000001534) ACSF3 (ENSGMOG00000001508) Euacanthomorphacea ANCESTRAL SPECIES 84 ENSGT00940000165402 ENSGT00940000161238.l ENSGT00940000157661.e.b ENSGT00940000157462.C.c.a ENSGT00950000182839.B.b.a ENSGT00940000157530.b.a ENSGT00390000013260.A.a ENSGT00940000165480.b ENSGT00940000165480.a ENSGT00730000111007.a.b ENSGT00940000153561.b.a.a.b ENSGT00940000158565 ENSGT01050000244900.a.a.b.eb ENSGT00940000163723.A.f.b ENSGT00940000163723.A.e ENSGT00940000155568 #22 ENSGT00390000017790 ENSGT00390000006347.a ENSGT00940000155405 ENSGT00940000165890 ENSGT00940000157369.b ENSGT00390000005764 ENSGT00530000063106.B ENSGT00940000155333.A.a ENSGT00940000154914 Pinecone sodierfish MODERN SPECIES 17 ENSMMDG00005002162 ENSMMDG00005002149 ENSMMDG00005002143 ENSMMDG00005002136 ENSMMDG00005002134 ENSMMDG00005002131 ENSMMDG00005002127 ENSMMDG00005002126 ENSMMDG00005002122 ENSMMDG00005002116 nadsyn1 (ENSMMDG00005002098) ENSMMDG00005002083 DOK4 (ENSMMDG00005002052) ENSMMDG00005002045 ccdc102a (ENSMMDG00005002043) arfgap2 (ENSMMDG00005002034) #22 pex16 (ENSMMDG00005002018) cars1 (ENSMMDG00005000850) ccnb2 (ENSMMDG00005000795) crybgx (ENSMMDG00005000793) lctla (ENSMMDG00005000784) BNC1 (ENSMMDG00005000777) HDGFL3 (ENSMMDG00005000775) rbb4l (ENSMMDG00005000718) txlng (ENSMMDG00005000463) ENSMMDG00005000425 ENSMMDG00005000416 ENSMMDG00005000198 orc1 (ENSMMDG00005024438) ENSMMDG00005024437 ENSMMDG00005024436 Percomorphaceae ANCESTRAL SPECIES 15 ENSGT00940000165402 ENSGT00940000161238.l ENSGT00940000176036 ENSGT00940000157661.e.b ENSGT00940000157462.C.c.a ENSGT00950000182839.B.b.a ENSGT00390000013260.A.a ENSGT00940000165480.b ENSGT00940000165480.a ENSGT00730000111007.a.b ENSGT00940000153561.b.a.a.b ENSGT00940000158565 ENSGT01050000244900.a.a.b.eb ENSGT00940000163723.A.f.b ENSGT00940000163723.A.e ENSGT00940000155568 #22 ENSGT00390000017790 ENSGT00390000006347.a ENSGT00940000155405 ENSGT00940000165890 ENSGT00940000157369.b ENSGT00390000005764 ENSGT00530000063106.B ENSGT00940000155333.A.a ENSGT00940000154914 ENSGT00940000157667.d ENSGT00940000158481.d ENSGT00940000156431 ENSGT00940000164386 ENSGT00390000006922 ENSGT00940000156938.e.e Tiger tail seahorse MODERN SPECIES 136 ENSHCOG00000005232 ENSHCOG00000005246 hars (ENSHCOG00000005282) ENSHCOG00000005287 ENSHCOG00000005292 ENSHCOG00000005295 ENSHCOG00000005297 NOCT (ENSHCOG00000005299) ENSHCOG00000005320 ENSHCOG00000000154 ENSHCOG00000005335 ppfia1 (ENSHCOG00000005363) arfgap2 (ENSHCOG00000005405) #22 pex16 (ENSHCOG00000005418) cars1 (ENSHCOG00000005493) crybgx (ENSHCOG00000005524) lctla (ENSHCOG00000005554) tipin (ENSHCOG00000005560) dis3l (ENSHCOG00000000183) ENSHCOG00000005626 ENSHCOG00000005631 rab11a (ENSHCOG00000005652) ENSHCOG00000005661 dapk2a (ENSHCOG00000005672) HERC1 (ENSHCOG00000005794) tspan18a (ENSHCOG00000005835) cd82a (ENSHCOG00000005923) ccnb2 (ENSHCOG00000005943) Percomorphaceae_B ANCESTRAL SPECIES 12 ENSGT00940000157661.e.b ENSGT00940000157462.C.c.a ENSGT00940000154390.E ENSGT00950000182839.B.b.a ENSGT01100000263513.a.a.b.b.b.a.b ENSGT00390000013260.A.a ENSGT00940000165480.b ENSGT00940000165480.a ENSGT00730000111007.a.b ENSGT00940000153561.a ENSGT00940000153561.b.a.a.b ENSGT00940000158565 ENSGT01050000244900.a.a.b.eb ENSGT00940000163723.A.f.b ENSGT00940000163723.A.e ENSGT00940000155568 #22 ENSGT00390000017790 ENSGT00940000174432 ENSGT00390000006347.a ENSGT00940000155405 ENSGT00940000165890 ENSGT00940000157369.b ENSGT00390000005764 ENSGT00530000063106.B ENSGT00940000155333.A.a ENSGT00940000154914 ENSGT01010000230193 ENSGT00940000157667.d ENSGT00940000158481.d ENSGT00940000156431 ENSGT00940000164386 Ovalentaria ANCESTRAL SPECIES 17 ENSGT00940000157661.e.b ENSGT00940000157462.C.c.a ENSGT00940000154390.E ENSGT00950000182839.B.b.a ENSGT01100000263513.a.a.b.b.b.a.b ENSGT00390000013260.A.a ENSGT00940000165480.b ENSGT00940000165480.a ENSGT00730000111007.a.b ENSGT00940000153561.a ENSGT00940000153561.b.a.a.b ENSGT00940000158565 ENSGT01050000244900.a.a.b.eb ENSGT00940000163723.A.f.b ENSGT00940000163723.A.e ENSGT00940000155568 #22 ENSGT00390000017790 ENSGT00940000174432 ENSGT00390000006347.a ENSGT00940000155405 ENSGT00940000165890 ENSGT00940000157369.b ENSGT00390000005764 ENSGT00530000063106.B ENSGT00940000155333.A.a ENSGT00940000154914 ENSGT01060000249384 ENSGT00940000160977.e.a ENSGT00940000153424.a.a.c.a.b ENSGT00940000155907.b.b ENSGT00940000157667.d Atherinomorphae ANCESTRAL SPECIES 8 ENSGT00940000176036 ENSGT00940000157661.e.b ENSGT00940000157462.C.c.a ENSGT00940000154390.E ENSGT00950000182839.B.b.a ENSGT00390000013260.A.a ENSGT00940000165480.b ENSGT00940000165480.a ENSGT00730000111007.a.b ENSGT00940000153561.a ENSGT00940000153561.b.a.a.b ENSGT00940000158565 ENSGT01050000244900.a.a.b.eb ENSGT00940000163723.A.f.b ENSGT00940000163723.A.e ENSGT00940000155568 #22 ENSGT00390000017790 ENSGT00940000174432 ENSGT00390000006347.a ENSGT00940000165890 ENSGT00940000157369.b ENSGT00390000005764 ENSGT00530000063106.B ENSGT00940000155333.A.a ENSGT00940000154914 ENSGT01060000249384 ENSGT00940000160977.e.a ENSGT00940000153424.a.a.c.a.b ENSGT00940000155907.b.b ENSGT00940000157667.d ENSGT00940000158481.d Cyprinodontiformes ANCESTRAL SPECIES 9 ENSGT00940000176036 ENSGT00940000157661.e.b ENSGT00940000157462.C.c.a ENSGT00940000154390.E ENSGT00950000182839.B.b.a ENSGT00390000013260.A.a ENSGT00940000165480.b ENSGT00940000165480.a ENSGT00730000111007.a.b ENSGT00940000153561.a ENSGT00940000153561.b.a.a.b ENSGT00940000158565 ENSGT01050000244900.a.a.b.eb ENSGT00940000163723.A.f.b ENSGT00940000163723.A.e ENSGT00940000155568 #22 ENSGT00390000017790 ENSGT00940000174432 ENSGT00390000006347.a ENSGT00940000165890 ENSGT00940000157369.b ENSGT00390000005764 ENSGT00530000063106.B ENSGT00940000155333.A.a ENSGT00940000154914 ENSGT01060000249384 ENSGT00940000160977.e.a ENSGT00940000153424.a.a.c.a.b ENSGT00940000155907.b.b ENSGT00940000157667.d ENSGT00940000158481.d Aplocheiloidei ANCESTRAL SPECIES 146 ENSGT00940000161238.l ENSGT00940000157661.e.b ENSGT00940000157462.C.c.a ENSGT00940000175971 ENSGT00940000165480.a ENSGT00730000111007.a.b ENSGT00940000153561.a ENSGT00940000153561.b.a.a.b ENSGT00940000158565 ENSGT01050000244900.a.a.b.eb ENSGT00940000166122 ENSGT00940000163723.A.f.b ENSGT00940000163723.A.e ENSGT00940000155568 #22 ENSGT00390000017790 ENSGT00940000155405 ENSGT00940000158481.d ENSGT00940000157667.d ENSGT01010000230193 Turquoise killifish MODERN SPECIES 1616 ENSNFUG00015017441 sult5a1 (ENSNFUG00015017316) dpep1 (ENSNFUG00015017308) SLC22A31 (ENSNFUG00015017299) ANKRD11 (ENSNFUG00015017283) SPG7 (ENSNFUG00015014730) cdh15 (ENSNFUG00015014522) ENSNFUG00015014504 ENSNFUG00015014325 SHANK2 (ENSNFUG00015014285) CTTN (ENSNFUG00015014016) ppfia1 (ENSNFUG00015010516) ENSNFUG00015010316 ENSNFUG00015010302 ENSNFUG00015010288 arfgap2 (ENSNFUG00015010223) #22 PEX16 (ENSNFUG00015010190) CCNB2 (ENSNFUG00015009080) cd82a (ENSNFUG00015009058) tspan18a (ENSNFUG00015009010) ENSNFUG00015006967 RASGRF1 (ENSNFUG00015006520) OLA.11922 (ENSNFUG00015006420) idh2 (ENSNFUG00015005613) ENSNFUG00015005475 ZNF710 (ENSNFUG00015005470) GPN1 (ENSNFUG00015005389) stmn4l (ENSNFUG00015005339) il17a/f1 (ENSNFUG00015005322) ENSNFUG00015005295 gtf2a2 (ENSNFUG00015005283) Mangrove rivulus MODERN SPECIES 718 ENSKMAG00000005620 ENSKMAG00000005585 arfgap2 (ENSKMAG00000005514) #22 Cyprinodontoidei ANCESTRAL SPECIES 6 ENSGT00940000157661.e.b ENSGT00940000157462.C.c.a ENSGT00940000154390.E ENSGT00950000182839.B.b.a ENSGT00390000013260.A.a ENSGT00940000165480.b ENSGT00940000165480.a ENSGT00730000111007.a.b ENSGT00940000153561.b.a.a.b ENSGT00940000158565 ENSGT01050000244900.a.a.b.eb ENSGT00940000163723.A.f.b.c ENSGT00940000166122 ENSGT00940000163723.A.f.b.d ENSGT00940000163723.A.e ENSGT00940000155568 #22 ENSGT00390000017790 ENSGT00940000174432 ENSGT00390000006347.a ENSGT00940000165890 ENSGT00940000157369.b ENSGT00390000005764 ENSGT00530000063106.B ENSGT00940000155333.A.a ENSGT00940000154914 ENSGT01060000249384 ENSGT00940000160977.e.a ENSGT00940000153424.a.a.c.a.b ENSGT00940000155907.b.b ENSGT00940000157667.d ENSGT00940000158481.d Poeciliinae ANCESTRAL SPECIES 35 ENSGT01040000240400.c.a.b.a.b.a.a.b.a.b.b.i.a.a.d.a.a.a ENSGT00940000157462.C.c.a ENSGT00940000154390.E ENSGT00950000182839.B.b.a ENSGT00390000013260.A.a ENSGT00940000165480.b ENSGT00940000165480.a ENSGT00730000111007.a.b ENSGT00940000153561.b.a.a.b ENSGT00940000158565 ENSGT01050000244900.a.a.b.eb ENSGT00940000163723.A.f.b.c ENSGT00940000166122 ENSGT00940000163723.A.f.b.d ENSGT00940000163723.A.e ENSGT00940000155568 #22 ENSGT00390000017790 ENSGT00940000174432 ENSGT00390000006347.a.c ENSGT00940000155405 ENSGT00940000165890 ENSGT00940000157369.b ENSGT00390000005764 ENSGT00530000063106.B ENSGT00940000155333.A.a ENSGT00940000154914 ENSGT01060000249384 ENSGT00940000160977.e.a ENSGT00940000153424.a.a.c.a.b ENSGT00940000155907.b.b ENSGT00980000198667 Platyfish MODERN SPECIES 18 lctla (ENSXMAG00000013735) crybgx (ENSXMAG00000013749) ENSXMAG00000023882 ENSXMAG00000027162 guca1g (ENSXMAG00000013766) ENSXMAG00000013779 ENSXMAG00000025723 SHANK2 (ENSXMAG00000013801) CTTN (ENSXMAG00000013851) ppfia1 (ENSXMAG00000013883) ENSXMAG00000029728 ENSXMAG00000002822 ENSXMAG00000027729 ENSXMAG00000024033 ENSXMAG00000028478 arfgap2 (ENSXMAG00000014012) #22 pex16 (ENSXMAG00000014054) ENSXMAG00000026369 ENSXMAG00000027007 ENSXMAG00000014089 ccnb2 (ENSXMAG00000014222) ENSXMAG00000014300 BRSK2 (ENSXMAG00000013347) ENSXMAG00000029426 ENSXMAG00000024041 ENSXMAG00000005760 ENSXMAG00000027318 ENSXMAG00000026811 ENSXMAG00000029872 large2 (ENSXMAG00000000708) ENSXMAG00000018442 Poecilia ANCESTRAL SPECIES 4 ENSGT01040000240400.c.a.b.a.b.a.a.b.a.b.b.i.a.a.d.a.a.a ENSGT00940000157462.C.c.a ENSGT00940000154390.E ENSGT00950000182839.B.b.a ENSGT00390000013260.A.a ENSGT00940000165480.b ENSGT00940000165480.a ENSGT00730000111007.a.b ENSGT00940000153561.b.a.a.b.eb ENSGT00940000158565 ENSGT01050000244900.a.a.b.eb ENSGT00940000163723.A.f.b.c ENSGT00940000166122 ENSGT00940000163723.A.f.b.d ENSGT00940000163723.A.e ENSGT00940000155568 #22 ENSGT00390000017790 ENSGT00940000174432 ENSGT00390000006347.a.c ENSGT00940000155405 ENSGT00940000165890 ENSGT00940000157369.b ENSGT00390000005764 ENSGT00530000063106.B ENSGT00940000155333.A.a.a ENSGT00940000154914 ENSGT01060000249384 ENSGT00940000160977.e.a ENSGT00940000153424.a.a.c.a.b ENSGT00940000155907.b.b ENSGT00980000198667 NAME_6 ANCESTRAL SPECIES 157 ENSGT01040000240400.c.a.b.a.b.a.a.b.a.b.b.i.a.a.d.a.a.a ENSGT00940000157462.C.c.a ENSGT00940000154390.E ENSGT00950000182839.B.b.a ENSGT00390000013260.A.a ENSGT00940000165480.b ENSGT00940000165480.a ENSGT00730000111007.a.b ENSGT00940000153561.b.a.a.b.eb ENSGT00940000158565 ENSGT01050000244900.a.a.b.eb ENSGT00940000163723.A.f.b.c ENSGT00940000166122 ENSGT00940000163723.A.f.b.d ENSGT00940000163723.A.e ENSGT00940000155568 #22 ENSGT00390000017790 ENSGT00940000174432 ENSGT00390000006347.a.c ENSGT00940000155405 ENSGT00940000165890 ENSGT00940000157369.b ENSGT00390000005764 ENSGT00530000063106.B ENSGT00940000155333.A.a.a ENSGT00940000154914 ENSGT01060000249384 ENSGT00940000160977.e.a ENSGT00940000153424.a.a.c.a.b ENSGT00940000155907.b.b ENSGT00980000198667 Sailfin molly MODERN SPECIES 150 ENSPLAG00000016776 CTTN (ENSPLAG00000016804) ppfia1 (ENSPLAG00000016939) ENSPLAG00000016957 ENSPLAG00000016962 arfgap2 (ENSPLAG00000016994) #22 pex16 (ENSPLAG00000017043) ENSPLAG00000017063 cars1 (ENSPLAG00000017097) ccnb2 (ENSPLAG00000017104) crybgx (ENSPLAG00000017115) lctla (ENSPLAG00000017147) tipin (ENSPLAG00000017154) dis3l (ENSPLAG00000017167) ENSPLAG00000017185 Amazon molly MODERN SPECIES 522 rassf7b (ENSPFOG00000018158) ENSPFOG00000018150 guca1g (ENSPFOG00000018146) ENSPFOG00000018140 ENSPFOG00000018127 ENSPFOG00000023350 SHANK2 (ENSPFOG00000018026) CTTN (ENSPFOG00000017981) ppfia1 (ENSPFOG00000017857) ENSPFOG00000017827 ENSPFOG00000024362 ENSPFOG00000024837 ENSPFOG00000017817 ENSPFOG00000022719 ENSPFOG00000022358 arfgap2 (ENSPFOG00000017810) #22 pex16 (ENSPFOG00000017774) cars1 (ENSPFOG00000017710) ccnb2 (ENSPFOG00000017659) crybgx (ENSPFOG00000017644) lctla (ENSPFOG00000017589) tipin (ENSPFOG00000017558) dis3l (ENSPFOG00000017504) ENSPFOG00000017485 Guppy DUPLICATION Guppy MODERN SPECIES 59 ENSPREG00000008385 #22 arfgap2 (ENSPREG00000008363) #22 ENSPREG00000008341 pex16 (ENSPREG00000008302) crybgx (ENSPREG00000008281) lctla (ENSPREG00000008245) tipin (ENSPREG00000008214) dis3l (ENSPREG00000008170) Guppy MODERN SPECIES 59 ENSPREG00000008385 #22 arfgap2 (ENSPREG00000008363) #22 ENSPREG00000008341 pex16 (ENSPREG00000008302) crybgx (ENSPREG00000008281) lctla (ENSPREG00000008245) tipin (ENSPREG00000008214) dis3l (ENSPREG00000008170) NAME_4 ANCESTRAL SPECIES 189 ENSGT00940000163723.A.e ENSGT00940000155568 #22 ENSGT00390000017790 ENSGT00390000006347.a ENSGT00940000165890 ENSGT00940000157369.b ENSGT00390000005764 ENSGT00530000063106.B ENSGT00940000155333.A.a ENSGT00940000154914 ENSGT00940000160977.e.a ENSGT00940000153424.a.a.c.a.b ENSGT00940000177441 ENSGT00980000198667 ENSGT00940000171177 ENSGT00940000169428 ENSGT00940000155907.b.b Mummichog MODERN SPECIES 2488 ENSFHEG00000002622 ENSFHEG00000002615 sema3e (ENSFHEG00000002602) sema3ab (ENSFHEG00000002552) sema3d (ENSFHEG00000002511) grm3 (ENSFHEG00000002489) elapor2a (ENSFHEG00000002474) fam107b (ENSFHEG00000002461) ENSFHEG00000002441 ENSFHEG00000002427 ENSFHEG00000002409 ENSFHEG00000002374 calub (ENSFHEG00000002368) arfgap2 (ENSFHEG00000002347) #22 pex16 (ENSFHEG00000000076) cars1 (ENSFHEG00000002276) crybgx (ENSFHEG00000002215) lctla (ENSFHEG00000002205) ENSFHEG00000002160 tipin (ENSFHEG00000002148) dis3l (ENSFHEG00000002133) Sheepshead minnow DUPLICATION Sheepshead minnow MODERN SPECIES 925 ENSCVAG00000013452 ENSCVAG00000013515 #22 arfgap2 (ENSCVAG00000013526) #22 pex16 (ENSCVAG00000013551) cars1 (ENSCVAG00000013626) crybgx (ENSCVAG00000013661) lctla (ENSCVAG00000013711) tipin (ENSCVAG00000013727) dis3l (ENSCVAG00000013781) ENSCVAG00000013854 rab11a (ENSCVAG00000013878) ENSCVAG00000013901 Sheepshead minnow MODERN SPECIES 925 ENSCVAG00000013452 ENSCVAG00000013515 #22 arfgap2 (ENSCVAG00000013526) #22 pex16 (ENSCVAG00000013551) cars1 (ENSCVAG00000013626) crybgx (ENSCVAG00000013661) lctla (ENSCVAG00000013711) tipin (ENSCVAG00000013727) dis3l (ENSCVAG00000013781) ENSCVAG00000013854 rab11a (ENSCVAG00000013878) ENSCVAG00000013901 Oryzias ANCESTRAL SPECIES 84 ENSGT00940000163723.A.f.b ENSGT00940000163723.A.e ENSGT00940000155568 #22 ENSGT00390000017790 ENSGT00390000006347.a ENSGT00940000165890 ENSGT00940000157369.b ENSGT00390000005764 ENSGT00530000063106.B ENSGT00940000155333.A.a ENSGT00940000154914 ENSGT00940000160977.e.a ENSGT00940000153424.a.a.c.a.b Oryzias_b ANCESTRAL SPECIES 108 ENSGT00940000163723.A.f.b ENSGT00940000163723.A.e ENSGT00940000155568 #22 ENSGT00390000017790 ENSGT00390000006347.a ENSGT00940000165890 ENSGT00940000157369.b ENSGT00390000005764 ENSGT00530000063106.B ENSGT00940000155333.A.a ENSGT00940000153424.a.a.c.a.b ENSGT00940000160977.e.a ENSGT00940000154914 Indian medaka MODERN SPECIES 433 ENSOMEG00000016452 ENSOMEG00000016513 arfgap2 (ENSOMEG00000016584) #22 pex16 (ENSOMEG00000016650) cars1 (ENSOMEG00000016785) crybgx (ENSOMEG00000016827) lctla (ENSOMEG00000016867) tipin (ENSOMEG00000016911) dis3l (ENSOMEG00000016984) ENSOMEG00000017014 ENSOMEG00000017328 dapk2a (ENSOMEG00000017417) ENSOMEG00000017446 rab11a (ENSOMEG00000017467) hypk (ENSOMEG00000017548) mfap1 (ENSOMEG00000017526) hddc3 (ENSOMEG00000017573) vps33b (ENSOMEG00000017633) Javanese ricefish MODERN SPECIES 17 ENSOJAG00000001288 atp6v0d1 (ENSOJAG00000000868) ENSOJAG00000000856 ENSOJAG00000000853 ENSOJAG00000000851 TNNT3 (ENSOJAG00000000845) myod1 (ENSOJAG00000000842) SAMD4A (ENSOJAG00000000786) ero1a (ENSOJAG00000000675) pacsin3 (ENSOJAG00000000649) #21 GLG1 (ENSOJAG00000000386) aph1b (ENSOJAG00000000118) ENSOJAG00000000092 ENSOJAG00000000082 ENSOJAG00000007826 arfgap2 (ENSOJAG00000007620) #22 pex16 (ENSOJAG00000007521) cars1 (ENSOJAG00000005475) crybgx (ENSOJAG00000005363) ENSOJAG00000005332 lctla (ENSOJAG00000005207) tipin (ENSOJAG00000005185) dis3l (ENSOJAG00000005138) ENSOJAG00000004737 dapk2a (ENSOJAG00000004619) ENSOJAG00000004573 rab11a (ENSOJAG00000004537) ENSOJAG00000004444 BRSK2 (ENSOJAG00000004004) rassf7b (ENSOJAG00000003851) ENSOJAG00000003836 Oryzias_a ANCESTRAL SPECIES 127 ENSGT00940000163723.A.e ENSGT00940000155568 #22 ENSGT00390000017790 ENSGT00390000006347.a ENSGT00940000165890 ENSGT00940000157369.b ENSGT00390000005764 ENSGT00530000063106.B ENSGT00940000155333.A.a ENSGT00940000154914 ENSGT00940000160977.e.a Chinese medaka MODERN SPECIES 1197 arfgap2 (ENSOSIG00000023231) #22 Japanese Medaka HdrR MODERN SPECIES 17 aph1b (ENSORLG00000018404) ENSORLG00000022342 ENSORLG00000025073 ENSORLG00000024705 ENSORLG00000028201 ENSORLG00000019694 atp6v0d1 (ENSORLG00000026745) foxr1 (ENSORLG00000019674) ENSORLG00000029446 ENSORLG00000019668 ENSORLG00000023713 ENSORLG00000022079 ENSORLG00000000017 ENSORLG00000029986 ENSORLG00000019631 arfgap2 (ENSORLG00000019613) #22 pex16 (ENSORLG00000019603) cars1 (ENSORLG00000022551) crybgx (ENSORLG00000030061) lctla (ENSORLG00000030071) tipin (ENSORLG00000018370) dis3l (ENSORLG00000018364) ENSORLG00000026415 ENSORLG00000027380 ENSORLG00000023805 ENSORLG00000018346 ENSORLG00000026066 RAB11A (ENSORLG00000018331) ENSORLG00000025680 mfap1 (ENSORLG00000019973) hypk (ENSORLG00000019968) Ovalentaria_B ANCESTRAL SPECIES 10 ENSGT00940000157661.e.b ENSGT00940000157462.C.c.a ENSGT00940000154390.E ENSGT00950000182839.B.b.a ENSGT01100000263513.a.a.b.b.b.a.b ENSGT00390000013260.A.a ENSGT00940000165480.b ENSGT00940000165480.a ENSGT00730000111007.a.b ENSGT00940000153561.a ENSGT00940000153561.b.a.a.b ENSGT00940000158565 ENSGT01050000244900.a.a.b.eb ENSGT00940000163723.A.f.b ENSGT00940000163723.A.e ENSGT00940000155568 #22 ENSGT00390000017790 ENSGT00940000174432 ENSGT00390000006347.a ENSGT00940000155405 ENSGT00940000165890 ENSGT00940000157369.b ENSGT00390000005764 ENSGT00530000063106.B ENSGT00940000155333.A.a ENSGT00940000154914 ENSGT00940000160977.e.a ENSGT00940000153424.a.a.c.a.b ENSGT00940000155907.b.b ENSGT00940000157667.d ENSGT00940000158481.d Pomacentridae ANCESTRAL SPECIES 15 ENSGT00940000157661.e.b ENSGT00940000157462.C.c.a ENSGT00940000154390.E ENSGT00950000182839.B.b.a ENSGT01100000263513.a.a.b.b.b.a.b ENSGT00390000013260.A.a ENSGT00940000165480.b ENSGT00940000165480.a ENSGT00730000111007.a.b ENSGT00940000153561.a ENSGT00940000153561.b.a.a.b ENSGT00940000158565 ENSGT01050000244900.a.a.b.eb ENSGT00940000163723.A.f.b ENSGT00940000163723.A.e ENSGT00940000155568 #22 ENSGT00390000017790 ENSGT00390000006347.a ENSGT00940000174432 ENSGT00940000155405 ENSGT00940000165890 ENSGT00940000157369.b ENSGT00940000155491.d ENSGT00940000159422.a.b ENSGT00940000155399.a ENSGT00550000074827.gb ENSGT00940000158086.b ENSGT00940000155524.f ENSGT00390000006548.a.a ENSGT00940000155628.ab ENSGT00940000155889.c Pomacentridae_A ANCESTRAL SPECIES 161 ENSGT00940000155568 #22 ENSGT00390000017790 ENSGT00390000006347.a ENSGT00940000174432 ENSGT00940000155405 ENSGT00940000165890 ENSGT00940000157369.b ENSGT00940000155491.d ENSGT00940000159422.a.b ENSGT00940000155399.a ENSGT00550000074827.gb ENSGT00940000158086.b ENSGT00940000155524.f ENSGT00390000006548.a.a ENSGT00940000155628.ab ENSGT00940000155889.c Amphiprion ANCESTRAL SPECIES 88 ENSGT00940000164669 ENSGT00390000008139 ENSGT00940000158146.a ENSGT00940000153499.b.b.d.a.a ENSGT00940000157505 ENSGT00940000158440.g.a ENSGT01030000234539.a.a.b.a.b.a.a ENSGT01030000234534.B.a.b.a.b ENSGT00950000182965.a.b.a.b ENSGT01030000235447 ENSGT00940000157475 ENSGT01030000234519.e.b.k.a ENSGT00940000155837.p ENSGT00940000158844 ENSGT00390000006043 ENSGT00940000155568 #22 ENSGT00390000017790 ENSGT00390000006347.a ENSGT00940000174432 ENSGT00940000155405 ENSGT00940000165890 ENSGT00940000157369.b ENSGT00940000155491.d ENSGT00940000159422.a.b ENSGT00940000155399.a ENSGT00550000074827.gb ENSGT00940000158086.b ENSGT00940000155524.f Clown anemonefish MODERN SPECIES 3603 kif23 (ENSAOCG00000003685) paqr5a (ENSAOCG00000003704) glceb (ENSAOCG00000003715) arfgap2 (ENSAOCG00000003742) #22 pex16 (ENSAOCG00000003768) cars1 (ENSAOCG00000003813) ccnb2 (ENSAOCG00000002382) crybgx (ENSAOCG00000003835) lctla (ENSAOCG00000003849) ENSAOCG00000003876 CRABP1 (ENSAOCG00000003883) slc25a44b (ENSAOCG00000003890) PSMA4 (ENSAOCG00000003905) rbpms2a (ENSAOCG00000000105) cpeb1b (ENSAOCG00000000107) polr3a (ENSAOCG00000003949) QRFPR (ENSAOCG00000003958) Orange clownfish MODERN SPECIES slc39a1 (ENSAPEG00000000497) tmem208 (ENSAPEG00000000523) smad6a (ENSAPEG00000000562) SMAD3 (ENSAPEG00000000565) map2k5 (ENSAPEG00000000578) ENSAPEG00000000686 skor1a (ENSAPEG00000000759) PIAS1 (ENSAPEG00000000768) ENSAPEG00000000820 ENSAPEG00000000905 UACA (ENSAPEG00000000937) TLE3 (ENSAPEG00000000988) kif23 (ENSAPEG00000001068) paqr5a (ENSAPEG00000001179) glceb (ENSAPEG00000001226) arfgap2 (ENSAPEG00000001255) #22 pex16 (ENSAPEG00000001278) cars1 (ENSAPEG00000001363) ENSAPEG00000001429 ccnb2 (ENSAPEG00000001449) crybgx (ENSAPEG00000001473) lctla (ENSAPEG00000001509) ENSAPEG00000001542 ENSAPEG00000001549 CRABP1 (ENSAPEG00000001621) cmc1 (ENSAPEG00000001643) slc25a44b (ENSAPEG00000001657) PSMA4 (ENSAPEG00000001679) rbpms2a (ENSAPEG00000001705) cpeb1b (ENSAPEG00000001756) polr3a (ENSAPEG00000001966) Spiny chromis MODERN SPECIES 1766 arfgap2 (ENSAPOG00000009666) #22 pex16 (ENSAPOG00000009733) cars1 (ENSAPOG00000009873) ccnb2 (ENSAPOG00000009899) crybgx (ENSAPOG00000009932) lctla (ENSAPOG00000009988) ENSAPOG00000010067 Bicolor damselfish MODERN SPECIES 1439 ENSSPAG00000001407 arfgap2 (ENSSPAG00000001417) #22 pex16 (ENSSPAG00000001554) cars1 (ENSSPAG00000001606) ccnb2 (ENSSPAG00000001756) crybgx (ENSSPAG00000001774) lctla (ENSSPAG00000001793) ENSSPAG00000001831 CRABP1 (ENSSPAG00000001915) slc25a44b (ENSSPAG00000001928) PSMA4 (ENSSPAG00000001953) rbpms2a (ENSSPAG00000001979) Cichlidae ANCESTRAL SPECIES 40 ENSGT00940000165402 ENSGT00940000161238.l ENSGT00940000176036.b ENSGT00940000157661.e.b ENSGT00940000157462.C.c.a ENSGT00950000182839.B.b.a ENSGT00940000160181.i ENSGT00390000013260.A.a ENSGT00940000165480.b ENSGT00730000111007.a.b ENSGT00940000153561.a ENSGT00940000153561.b.a.a.b ENSGT00940000158565 ENSGT01050000244900.a.a.b.eb ENSGT00940000163723.A.e ENSGT00940000155568 #22 ENSGT00390000017790 ENSGT00940000174432 ENSGT00390000006347.a ENSGT00940000155405 ENSGT00940000165890 ENSGT00940000157369.b ENSGT00390000005764 ENSGT00530000063106.B ENSGT00940000155333.A.a ENSGT00940000154914 ENSGT00940000160977.e.a ENSGT00940000153424.a.a.c.a.b ENSGT00940000155907.b.b ENSGT00940000157667.d ENSGT00940000158481.d Pseudocrenilabrinae ANCESTRAL SPECIES 28 ENSGT00940000167956.a ENSGT00940000161238.l ENSGT00940000176036.b ENSGT00940000157661.e.b ENSGT00940000157462.C.c.a ENSGT00950000182839.B.b.a ENSGT00940000160181.i ENSGT00390000013260.A.a ENSGT00940000165480.b ENSGT00730000111007.a.b ENSGT00940000153561.a ENSGT00940000153561.b.a.a.b ENSGT00940000158565 ENSGT01050000244900.a.a.b.eb ENSGT00940000163723.A.e ENSGT00940000155568 #22 ENSGT00390000017790 ENSGT00390000006347.a ENSGT00940000155405 ENSGT00940000165890 ENSGT00940000157369.b ENSGT00390000005764 ENSGT00530000063106.B ENSGT00940000155333.A.a.c ENSGT00940000155333.A.a.d.a ENSGT00940000154914 ENSGT00940000160977.e.a ENSGT00940000153424.a.a.c.a.b ENSGT00940000155907.b.b ENSGT00940000158481.d ENSGT00940000156431 Nile tilapia MODERN SPECIES ENSONIG00000018107 ENSONIG00000018108 ENSONIG00000033332 ENSONIG00000042289 ENSONIG00000033358 TLNRD1 (ENSONIG00000007320) mtch2 (ENSONIG00000007321) ENSONIG00000038545 tollip (ENSONIG00000008316) ENSONIG00000008311 ENSONIG00000028129 ENSONIG00000027350 ppfia1 (ENSONIG00000015649) ENSONIG00000040534 ENSONIG00000015659 arfgap2 (ENSONIG00000015660) #22 ENSONIG00000030524 pex16 (ENSONIG00000015670) ENSONIG00000028006 cars1 (ENSONIG00000015673) ccnb2 (ENSONIG00000015677) crybgx (ENSONIG00000015680) lctla (ENSONIG00000015683) tipin (ENSONIG00000029040) dis3l (ENSONIG00000015695) ENSONIG00000042241 SHANK2 (ENSONIG00000039450) ENSONIG00000015636 guca1g (ENSONIG00000033758) ENSONIG00000030957 rdh14a (ENSONIG00000015633) Pseudocrenilabrinae_A ANCESTRAL SPECIES 32 ENSGT00940000167956.a ENSGT00940000161238.l ENSGT00940000176036.b ENSGT00940000157661.e.b ENSGT00940000157462.C.c.a ENSGT00950000182839.B.b.a ENSGT00940000160181.i ENSGT00390000013260.A.a ENSGT00940000165480.b ENSGT00730000111007.a.b ENSGT00940000153561.a ENSGT00940000153561.b.a.a.b ENSGT00940000158565 ENSGT01050000244900.a.a.b.eb ENSGT00940000163723.A.e ENSGT00940000155568 #22 ENSGT00390000017790 ENSGT00390000006347.a ENSGT00940000155405 ENSGT00940000165890 ENSGT00940000157369.b ENSGT00390000005764 ENSGT00530000063106.B ENSGT00940000155333.A.a.c ENSGT00940000154914 ENSGT00940000160977.e.a ENSGT00940000153424.a.a.c.a.b ENSGT00940000155907.b.b ENSGT00940000158481.d ENSGT00940000156431 ENSGT00940000164386 Haplochromini ANCESTRAL SPECIES 34 ENSGT00940000161238.l ENSGT00940000157661.e.b.f ENSGT00940000176036.b ENSGT00940000157661.e.b.e ENSGT00940000157462.C.c.a ENSGT00950000182839.B.b.a ENSGT00940000160181.i ENSGT00390000013260.A.a ENSGT00940000165480.b ENSGT00730000111007.a.b ENSGT00940000153561.a ENSGT00940000153561.b.a.a.b ENSGT00940000158565 ENSGT01050000244900.a.a.b.eb ENSGT00940000163723.A.e ENSGT00940000155568 #22 ENSGT00390000017790 ENSGT00390000006347.a ENSGT00940000155405 ENSGT00940000165890 ENSGT00940000157369.b ENSGT00390000005764 ENSGT00530000063106.B ENSGT00940000155333.A.a.c ENSGT00940000154914 ENSGT00940000160977.e.a ENSGT00940000153424.a.a.c.a.b ENSGT00940000155907.b.b ENSGT00940000158481.d ENSGT00940000156431 ENSGT00940000164386 Haplochromini_A ANCESTRAL SPECIES 39 ENSGT00940000161238.l ENSGT00940000157661.e.b.f ENSGT00940000176036.b ENSGT00940000157661.e.b.e ENSGT00940000157462.C.c.a ENSGT00950000182839.B.b.a ENSGT00940000160181.i ENSGT00390000013260.A.a ENSGT00940000165480.b ENSGT00730000111007.a.b ENSGT00940000153561.a ENSGT00940000153561.b.a.a.b ENSGT00940000158565 ENSGT01050000244900.a.a.b.eb ENSGT00940000163723.A.e ENSGT00940000155568 #22 ENSGT00390000017790 ENSGT00390000006347.a ENSGT00940000155405 ENSGT00940000165890 ENSGT00940000157369.b ENSGT00390000005764.r ENSGT00530000063106.B ENSGT00940000155333.A.a.c ENSGT00940000154914 ENSGT00940000160977.e.a ENSGT00940000153424.a.a.c.a.b ENSGT00940000155907.b.b ENSGT00940000158481.d ENSGT00940000156431 ENSGT00940000164386 Haplochromini_B ANCESTRAL SPECIES 56 ENSGT00940000165402 ENSGT00940000167956.a ENSGT00940000161238.l ENSGT00940000157661.e.b.e ENSGT00940000157462.C.c.a ENSGT00950000182839.B.b.a ENSGT00940000160181.i ENSGT00390000013260.A.a ENSGT00940000165480.b ENSGT00730000111007.a.b ENSGT00940000153561.a ENSGT00940000153561.b.a.a.b ENSGT00940000158565 ENSGT01050000244900.a.a.b.eb ENSGT00940000163723.A.e ENSGT00940000155568 #22 ENSGT00390000017790 ENSGT00390000006347.a ENSGT00940000155405 ENSGT00940000165890 ENSGT00940000157369.b Eastern happy MODERN SPECIES ENSACLG00000003698 ENSACLG00000003658 ABTB2 (ENSACLG00000003633) ENSACLG00000003624 BRSK2 (ENSACLG00000003501) rassf7b (ENSACLG00000003005) rdh14a (ENSACLG00000003000) ENSACLG00000002978 guca1g (ENSACLG00000002954) ENSACLG00000002620 ENSACLG00000002570 SHANK2 (ENSACLG00000002556) CTTN (ENSACLG00000002506) ppfia1 (ENSACLG00000002291) ENSACLG00000002271 arfgap2 (ENSACLG00000002202) #22 pex16 (ENSACLG00000002118) cars1 (ENSACLG00000001993) ccnb2 (ENSACLG00000001980) crybgx (ENSACLG00000001945) lctla (ENSACLG00000001883) ENSACLG00000001865 ENSACLG00000001862 ENSACLG00000001812 rab11a (ENSACLG00000001775) ENSACLG00000001756 dapk2a (ENSACLG00000001586) HERC1 (ENSACLG00000001328) cd82a (ENSACLG00000001316) kmt5b (ENSACLG00000001197) pole3 (ENSACLG00000001171) Zebra mbuna MODERN SPECIES 1091 ENSMZEG00005016613 ENSMZEG00005016626 ABTB2 (ENSMZEG00005016636) ENSMZEG00005016643 BRSK2 (ENSMZEG00005016650) ENSMZEG00005016671 rdh14a (ENSMZEG00005016676) ENSMZEG00005016685 guca1g (ENSMZEG00005016688) ENSMZEG00005016700 ENSMZEG00005016723 SHANK2 (ENSMZEG00005016728) CTTN (ENSMZEG00005016735) ppfia1 (ENSMZEG00005016744) ENSMZEG00005016762 arfgap2 (ENSMZEG00005016778) #22 pex16 (ENSMZEG00005016810) cars1 (ENSMZEG00005016834) ccnb2 (ENSMZEG00005016859) crybgx (ENSMZEG00005016862) lctla (ENSMZEG00005016870) npsn (ENSMZEG00005016894) ENSMZEG00005016898 STARD5 (ENSMZEG00005016903) ENSMZEG00005016917 ENSMZEG00005016921 pole3 (ENSMZEG00005016930) kmt5b (ENSMZEG00005016943) cd82a (ENSMZEG00005016958) HERC1 (ENSMZEG00005016974) ENSMZEG00005017030 P. nyererei MODERN SPECIES 495 ENSPNYG00000010125 ENSPNYG00000010100 ABTB2 (ENSPNYG00000009635) BRSK2 (ENSPNYG00000009547) ENSPNYG00000009534 rdh14a (ENSPNYG00000009530) ENSPNYG00000009504 guca1g (ENSPNYG00000009478) ENSPNYG00000009392 ENSPNYG00000009355 ENSPNYG00000009319 ENSPNYG00000009307 CTTN (ENSPNYG00000009291) ppfia1 (ENSPNYG00000009231) ENSPNYG00000009215 arfgap2 (ENSPNYG00000009178) #22 pex16 (ENSPNYG00000009118) cars1 (ENSPNYG00000009008) ccnb2 (ENSPNYG00000008956) crybgx (ENSPNYG00000008928) lctla (ENSPNYG00000008886) Burton s mouthbrooder MODERN SPECIES 792 ENSHBUG00000014328 ENSHBUG00000014312 CTTN (ENSHBUG00000014301) ppfia1 (ENSHBUG00000014217) ENSHBUG00000013852 arfgap2 (ENSHBUG00000013839) #22 pex16 (ENSHBUG00000013764) cars1 (ENSHBUG00000013664) ccnb2 (ENSHBUG00000013482) lctla (ENSHBUG00000013442) Lyretail cichlid MODERN SPECIES 507 ENSNBRG00000016141 ENSNBRG00000016179 ENSNBRG00000016198 ENSNBRG00000016258 ENSNBRG00000016271 ppfia1 (ENSNBRG00000016292) arfgap2 (ENSNBRG00000016368) #22 pex16 (ENSNBRG00000016393) ENSNBRG00000016417 ccnb2 (ENSNBRG00000016430) crybgx (ENSNBRG00000016448) lctla (ENSNBRG00000016496) Midas cichlid MODERN SPECIES 784 ENSACIG00000023811 KCNG4 (ENSACIG00000023815) ENSACIG00000023817 ENSACIG00000023819 GABARAPL2 (ENSACIG00000023822) ENSACIG00000023835 ENSACIG00000023839 celf1 (ENSACIG00000023843) #11 mtfmt (ENSACIG00000023849) vps35 (ENSACIG00000023866) zgc:92818 (ENSACIG00000023876) ANO9 (ENSACIG00000023881) ENSACIG00000023888 CTTN (ENSACIG00000023897) ppfia1 (ENSACIG00000023909) arfgap2 (ENSACIG00000023912) #22 pex16 (ENSACIG00000023915) fah (ENSACIG00000023920) ADAMTS17 (ENSACIG00000023926) MINAR1 (ENSACIG00000023930) mthfs (ENSACIG00000023932) CERS3 (ENSACIG00000023933) ENSACIG00000023934 asb7 (ENSACIG00000023935) asb7 (ENSACIG00000023937) aldh1a3 (ENSACIG00000023938) ENSACIG00000000192 chsy1 (ENSACIG00000000324) Percomorphaceae_C ANCESTRAL SPECIES 11 ENSGT00940000157462.C.c.a ENSGT00940000154390.E.c ENSGT00940000154390.E.d ENSGT00950000182839.B.b.a ENSGT01100000263513.a.a.b.b.b.a.b ENSGT00390000013260.A.a ENSGT00940000165480.b ENSGT00940000165480.a ENSGT00730000111007.a.b ENSGT00940000153561.a ENSGT00940000153561.b.a.a.b ENSGT00940000158565 ENSGT01050000244900.a.a.b.eb ENSGT00940000163723.A.f.b ENSGT00940000163723.A.e ENSGT00940000155568 #22 ENSGT00390000017790 ENSGT00940000174432 ENSGT00390000006347.a ENSGT00940000155405 ENSGT00940000165890 ENSGT00940000157369.b ENSGT00390000005764 ENSGT00530000063106.B ENSGT00940000155333.A.a.h ENSGT00940000154914 ENSGT00940000160977.e.a ENSGT00940000153424.a.a.c.a.b ENSGT00940000155907.b.b ENSGT00940000157667.d ENSGT00940000158481.d Percomorphaceae_D DUPLICATION Percomorphaceae_D ANCESTRAL SPECIES ENSGT00940000155568.k #22 Carangaria ANCESTRAL SPECIES ENSGT00940000155568.k #22 Carangaria_A ANCESTRAL SPECIES ENSGT00940000155568.k #22 Seriola ANCESTRAL SPECIES ENSGT00940000155568.k #22 Yellowtail amberjack DUPLICATION Yellowtail amberjack MODERN SPECIES 737 ENSSLDG00000007625 #22 Yellowtail amberjack MODERN SPECIES 1566 ENSSLDG00000003233 #22 Pleuronectoidei ANCESTRAL SPECIES ENSGT00940000155568.k #22 Tongue sole MODERN SPECIES 167 ENSCSEG00000006743 #22 Percomorphaceae_D ANCESTRAL SPECIES 11 ENSGT00940000161238.l ENSGT00940000157661.e.b ENSGT00940000157462.C.c.a ENSGT00940000154390.E.c ENSGT00950000182839.B.b.a ENSGT01100000263513.a.a.b.b.b.a.b ENSGT00390000013260.A.a ENSGT00940000165480.b ENSGT00940000165480.a ENSGT00730000111007.a.b ENSGT00940000153561.b.a.a.b ENSGT00940000158565 ENSGT01050000244900.a.a.b.eb ENSGT00940000163723.A.f.b ENSGT00940000163723.A.e ENSGT00940000155568.l #22 ENSGT00390000017790 ENSGT00940000174432 ENSGT00390000006347.a ENSGT00940000165890 ENSGT00940000157369.b ENSGT00390000005764 ENSGT00530000063106.B ENSGT00940000155333.A.a.h ENSGT00940000154914 ENSGT00940000160977.e.a ENSGT00940000153424.a.a.c.a.b ENSGT00940000155907.b.b ENSGT00940000157667.d ENSGT00940000158481.d ENSGT00940000155405 Anabantaria ANCESTRAL SPECIES 11 ENSGT00940000156926.d ENSGT00940000160333 ENSGT00530000062962.b.a.e ENSGT01030000234532.B.e.b.e ENSGT00940000155836.B ENSGT00940000166202 ENSGT00390000002030 ENSGT00390000013481.c.a ENSGT00940000157933 ENSGT00390000007753.b ENSGT00950000182973.b.a #21 ENSGT00390000011262.e.b ENSGT01030000234588.b.b.b.b.a.b.b ENSGT00940000163723.A.f.b ENSGT00940000163723.A.e ENSGT00940000155568.l #22 ENSGT00390000017790 ENSGT00390000006347.a ENSGT00940000155405 ENSGT00940000165890 ENSGT00940000157369.b ENSGT00390000005764 ENSGT00530000063106.B ENSGT00940000155333.A.a.h ENSGT00940000154914 ENSGT00940000160977.e.a ENSGT00940000153424.a.a.c.a.b ENSGT00940000155907.b.b ENSGT00940000157667.d ENSGT00940000158481.d ENSGT00940000156431 Anabantoidei ANCESTRAL SPECIES 8 ENSGT00940000156926.d ENSGT00940000160333 ENSGT00530000062962.b.a.e ENSGT01030000234532.B.e.b.e ENSGT00940000155836.B ENSGT00940000166202 ENSGT00390000002030 ENSGT00390000013481.c.a ENSGT00940000157933 ENSGT00390000007753.b ENSGT00950000182973.b.a #21 ENSGT00390000011262.e.b ENSGT01030000234588.b.b.b.b.a.b.b ENSGT00940000163723.A.f.b ENSGT00940000163723.A.e ENSGT00940000155568.l #22 ENSGT00390000017790 ENSGT00390000006347.a ENSGT00940000155405 ENSGT00940000165890 ENSGT00940000157369.b ENSGT00390000005764 ENSGT00530000063106.B ENSGT00940000155333.A.a.h ENSGT00940000154914 ENSGT00940000160977.e.a ENSGT00940000153424.a.a.c.a.b ENSGT00940000155907.b.b ENSGT00940000157667.d ENSGT00940000158481.d ENSGT00940000156431 Climbing perch MODERN SPECIES 16 ENSATEG00000021798 ENSATEG00000021837 ENSATEG00000021851 HACD3 (ENSATEG00000021866) SLC24A1 (ENSATEG00000021887) DENND4A (ENSATEG00000021908) socs4 (ENSATEG00000021970) wdhd1 (ENSATEG00000021986) gch1 (ENSATEG00000022027) SAMD4A (ENSATEG00000022040) ero1a (ENSATEG00000022081) ENSATEG00000022101 #21 ENSATEG00000022132 ENSATEG00000022204 ENSATEG00000022233 ENSATEG00000022248 #22 ENSATEG00000022262 ENSATEG00000022291 ENSATEG00000022355 crybgx (ENSATEG00000022426) lctla (ENSATEG00000022437) tipin (ENSATEG00000022453) dis3l (ENSATEG00000022464) ENSATEG00000022505 RAB11A (ENSATEG00000023730) ENSATEG00000022546 ENSATEG00000022559 ENSATEG00000022577 ENSATEG00000022648 ENSATEG00000022662 ENSATEG00000022675 Siamese fighting fish MODERN SPECIES 14 zdhhc13 (ENSBSLG00000005203) mpped2a (ENSBSLG00000004960) ENSBSLG00000004906 ENSBSLG00000004802 ENSBSLG00000004363 dennd4a (ENSBSLG00000004135) socs4 (ENSBSLG00000004085) gch1 (ENSBSLG00000004073) SAMD4A (ENSBSLG00000004019) wdhd1 (ENSBSLG00000003779) pacsin3 (ENSBSLG00000003052) #21 glg1b (ENSBSLG00000002553) tnni2b.1 (ENSBSLG00000020423) ENSBSLG00000020374 ENSBSLG00000020364 arfgap2 (ENSBSLG00000020339) #22 pex16 (ENSBSLG00000020299) cars1 (ENSBSLG00000019894) paqr5a (ENSBSLG00000019801) glceb (ENSBSLG00000019776) anp32a (ENSBSLG00000019742) CORO2B (ENSBSLG00000019705) itga11a (ENSBSLG00000019157) ENSBSLG00000019124 ADAMTS7 (ENSBSLG00000019017) calml4a (ENSBSLG00000018987) cln6a (ENSBSLG00000018967) chrna7a (ENSBSLG00000018854) trip4 (ENSBSLG00000018784) znf609b (ENSBSLG00000018744) senp8 (ENSBSLG00000018642) Zig-zag eel MODERN SPECIES 17 ENSMAMG00000016336 ENSMAMG00000016434 ENSMAMG00000016453 HACD3 (ENSMAMG00000016477) SLC24A1 (ENSMAMG00000016511) DENND4A (ENSMAMG00000016577) socs4 (ENSMAMG00000016740) wdhd1 (ENSMAMG00000016742) gch1 (ENSMAMG00000016761) SAMD4A (ENSMAMG00000016799) ero1a (ENSMAMG00000016859) ENSMAMG00000016868 #21 ENSMAMG00000016896 TNNI2 (ENSMAMG00000027039) ENSMAMG00000016992 ENSMAMG00000017001 #22 ENSMAMG00000017043 ENSMAMG00000017073 ENSMAMG00000017121 crybgx (ENSMAMG00000017150) lctla (ENSMAMG00000017174) tipin (ENSMAMG00000017203) dis3l (ENSMAMG00000017229) ENSMAMG00000017293 RAB11A (ENSMAMG00000027414) ENSMAMG00000017337 ENSMAMG00000025603 ENSMAMG00000017358 ENSMAMG00000026774 ENSMAMG00000017520 ENSMAMG00000024446 Carangaria ANCESTRAL SPECIES 11 ENSGT00940000161238.l ENSGT00940000157661.e.b ENSGT00940000157462.C.c.a ENSGT00940000154390.E.c ENSGT00950000182839.B.b.a ENSGT01100000263513.a.a.b.b.b.a.b ENSGT00390000013260.A.a ENSGT00940000165480.b ENSGT00940000165480.a ENSGT00730000111007.a.b ENSGT00940000153561.b.a.a.b ENSGT00940000158565 ENSGT01050000244900.a.a.b.eb ENSGT00940000163723.A.f.b ENSGT00940000163723.A.e ENSGT00940000155568.l #22 ENSGT00390000017790 ENSGT00940000174432 ENSGT00390000006347.a ENSGT00940000165890 ENSGT00940000157369.b ENSGT00390000005764 ENSGT00530000063106.B ENSGT00940000155333.A.a.h ENSGT00940000154914 ENSGT00940000160977.e.a ENSGT00940000153424.a.a.c.a.b ENSGT00940000155907.b.b ENSGT00940000157667.d ENSGT00940000158481.d ENSGT00940000155405 Carangaria_A ANCESTRAL SPECIES 128 ENSGT00940000163723.A.e ENSGT00940000155568.l #22 ENSGT00390000017790 ENSGT00940000174432 ENSGT00390000006347.a Seriola ANCESTRAL SPECIES 30 ENSGT00390000008748.b.g.b ENSGT00940000159572.a.a ENSGT00390000014038 ENSGT00940000154905.i.a ENSGT00940000156476.g ENSGT00940000158166 ENSGT00940000156684 ENSGT00940000155889.c ENSGT00940000155628 ENSGT00390000006548.a.a ENSGT00940000155524.f ENSGT00940000158086.b ENSGT00550000074827.gb ENSGT00940000163723.A.f.a ENSGT00940000163723.A.e ENSGT00940000155568.l #22 ENSGT00390000017790 ENSGT00940000174432 ENSGT00390000006347.a ENSGT00950000183118.A.c.a ENSGT00940000174889 ENSGT00940000159830 ENSGT00940000161181.c ENSGT00940000157355.c ENSGT00940000159407.q ENSGT00950000182963.b.a.d ENSGT00940000173933.b ENSGT00940000158077 ENSGT00390000016316 ENSGT00390000011024 ENSGT00390000008044 Yellowtail amberjack MODERN SPECIES 2449 cpeb1b (ENSSLDG00000023053) rbpms2a (ENSSLDG00000023070) PSMA4 (ENSSLDG00000023100) ENSSLDG00000023111 ENSSLDG00000023130 arfgap2 (ENSSLDG00000023146) #22 pex16 (ENSSLDG00000023186) ENSSLDG00000023213 cars1 (ENSSLDG00000023222) PHKA2 (ENSSLDG00000023250) ENSSLDG00000023272 ppef1 (ENSSLDG00000023285) RS1 (ENSSLDG00000023297) cdkl5 (ENSSLDG00000023318) SCML2 (ENSSLDG00000023438) NHS (ENSSLDG00000023454) ace2 (ENSSLDG00000023484) ENSSLDG00000023498 zgc:113276 (ENSSLDG00000023512) pir (ENSSLDG00000023527) vegfd (ENSSLDG00000023540) Greater amberjack MODERN SPECIES 3 znf609b (ENSSDUG00000000271) GRAMD2A (ENSSDUG00000000304) senp8 (ENSSDUG00000000317) myo9aa (ENSSDUG00000000331) scamp2l (ENSSDUG00000000467) bbs4 (ENSSDUG00000000497) neo1a (ENSSDUG00000000565) ENSSDUG00000000644 SNX1 (ENSSDUG00000000660) csnk1g1 (ENSSDUG00000000671) ENSSDUG00000000684 ENSSDUG00000000707 cpeb1b (ENSSDUG00000000721) PSMA4 (ENSSDUG00000000861) ENSSDUG00000000866 arfgap2 (ENSSDUG00000000883) #22 pex16 (ENSSDUG00000000913) ENSSDUG00000000956 cars1 (ENSSDUG00000000977) PHKA2 (ENSSDUG00000001094) ENSSDUG00000002113 ppef1 (ENSSDUG00000002125) RS1 (ENSSDUG00000002148) cdkl5 (ENSSDUG00000002201) SCML2 (ENSSDUG00000002252) NHS (ENSSDUG00000002264) ENSSDUG00000002294 ace2 (ENSSDUG00000002311) ENSSDUG00000002347 zgc:113276 (ENSSDUG00000002364) pir (ENSSDUG00000002403) Barramundi perch MODERN SPECIES 100 ENSLCAG00010007117 ENSLCAG00010007114 BRSK2 (ENSLCAG00010007105) hsd11b2 (ENSLCAG00010007090) zdhhc1 (ENSLCAG00010007088) tppp3 (ENSLCAG00010007080) ENSLCAG00010007075 ENSLCAG00010007051 trpm1a (ENSLCAG00010006810) galr1b (ENSLCAG00010006750) ENSLCAG00010006746 VPS13C (ENSLCAG00010005593) shcbp1 (ENSLCAG00010005362) mtfmt (ENSLCAG00010005345) celf1 (ENSLCAG00010005339) #11 arfgap2 (ENSLCAG00010005307) #22 pex16 (ENSLCAG00010005280) cars1 (ENSLCAG00010004799) ccnb2 (ENSLCAG00010004723) cd82a (ENSLCAG00010004720) TSPAN18 (ENSLCAG00010004718) ENSLCAG00010004716 dapk2a (ENSLCAG00010004706) ENSLCAG00010004701 rab11a (ENSLCAG00010004697) ENSLCAG00010004683 dis3l (ENSLCAG00010004501) tipin (ENSLCAG00010004459) lctla (ENSLCAG00010004446) crybgx (ENSLCAG00010004435) ccnb2 (ENSLCAG00010004421) Pleuronectoidei ANCESTRAL SPECIES 52 ENSGT00940000161238.l ENSGT00940000176036 ENSGT00940000157661.e.b ENSGT00940000157462.C.c.a ENSGT00940000154390.E.c ENSGT00950000182839.B.b.a ENSGT00390000013260.A.a ENSGT00940000165480.b ENSGT00940000165480.a ENSGT00730000111007.a.b ENSGT00940000153561.b.a.a.b ENSGT00940000158565 ENSGT01050000244900.a.a.b.eb ENSGT00940000163723.A.f.b ENSGT00940000163723.A.e ENSGT00940000155568.l #22 ENSGT00390000017790 ENSGT00390000006347.a ENSGT00940000155405 ENSGT00940000165890 ENSGT00940000157369.b ENSGT00390000005764 ENSGT00530000063106.B ENSGT00940000155333.A.a.h ENSGT00940000155333.A.a.g.b ENSGT00940000154914 ENSGT00940000153424.a.a.c.a.b ENSGT00940000155907.b.b ENSGT00940000158481.d Turbot MODERN SPECIES 17 ENSSMAG00000003415 ENSSMAG00000003339 ENSSMAG00000003303 ENSSMAG00000027175 ENSSMAG00000032043 rassf7b (ENSSMAG00000005710) ENSSMAG00000005724 ENSSMAG00000005741 ENSSMAG00000005753 ENSSMAG00000005764 SHANK2 (ENSSMAG00000027423) ENSSMAG00000030149 PPFIA1 (ENSSMAG00000026619) ENSSMAG00000026740 ENSSMAG00000003524 ENSSMAG00000003550 #22 ENSSMAG00000003662 ENSSMAG00000035843 ENSSMAG00000003803 ENSSMAG00000004225 ENSSMAG00000003951 ENSSMAG00000033814 ENSSMAG00000030745 ENSSMAG00000003980 ENSSMAG00000031269 RAB11A (ENSSMAG00000033097) ENSSMAG00000030576 ENSSMAG00000035419 dis3l (ENSSMAG00000004147) tipin (ENSSMAG00000004166) lctla (ENSSMAG00000004176) Tongue sole MODERN SPECIES 15 ANO9 (ENSCSEG00000007359) sh3gl3a (ENSCSEG00000007417) BNC1 (ENSCSEG00000007441) HDGFL3 (ENSCSEG00000007457) rbb4l (ENSCSEG00000007481) txlng (ENSCSEG00000007505) ccdc102a (ENSCSEG00000007518) DOK4 (ENSCSEG00000007540) nadsyn1 (ENSCSEG00000007556) tpcn2 (ENSCSEG00000007591) CTTN (ENSCSEG00000007610) ENSCSEG00000007629 ppfia1 (ENSCSEG00000007640) ENSCSEG00000007874 ENSCSEG00000007884 arfgap2 (ENSCSEG00000007898) #22 pex16 (ENSCSEG00000007925) cars1 (ENSCSEG00000007939) crybgx (ENSCSEG00000007996) tipin (ENSCSEG00000008013) dis3l (ENSCSEG00000008022) gjd6 (ENSCSEG00000008036) ENSCSEG00000008045 lmnl3 (ENSCSEG00000008077) ENSCSEG00000008334 SLCO3A1 (ENSCSEG00000008478) ENSCSEG00000008497 ENSCSEG00000008534 ENSCSEG00000008568 gnrhr2 (ENSCSEG00000008602) GLO1 (ENSCSEG00000008609) Eupercaria ANCESTRAL SPECIES 14 ENSGT00940000161238.l ENSGT00940000157661.e.b ENSGT00940000157462.C.c.a ENSGT00940000154390.E.d ENSGT00950000182839.B.b.a ENSGT00390000013260.A.a ENSGT00940000165480.b ENSGT00940000165480.a ENSGT00730000111007.a.b ENSGT00940000153561.a ENSGT00940000153561.b.a.a.b ENSGT00940000158565 ENSGT01050000244900.a.a.b.eb ENSGT00940000163723.A.f.b ENSGT00940000163723.A.e ENSGT00940000155568 #22 ENSGT00390000017790 ENSGT00390000006347.a ENSGT00940000155405 ENSGT00940000165890 ENSGT00940000157369.b ENSGT00390000005764 ENSGT00530000063106.B ENSGT00940000155333.A.a.h ENSGT00940000154914 ENSGT00940000160977.e.a ENSGT00940000153424.a.a.c.a.b ENSGT00940000155907.b.b ENSGT00940000157667.d ENSGT00940000158481.d ENSGT00940000156431 Tetraodontidae ANCESTRAL SPECIES 4 ENSGT00940000158758 ENSGT00940000165402 ENSGT00940000157462.C.c.a ENSGT00940000175971 ENSGT00950000182839.B.b.a ENSGT00390000013260.A.a ENSGT00940000165480.b ENSGT00940000165480.a ENSGT00730000111007.a.b ENSGT00940000153561.b.a.a.b ENSGT00940000158565 ENSGT01050000244900.a.a.b.eb ENSGT00940000163723.A.f.b ENSGT00940000163723.A.f.a ENSGT00940000163723.A.e ENSGT00940000155568 #22 ENSGT00390000017790 ENSGT00390000006347.a ENSGT00940000155405 ENSGT00940000165890 ENSGT00940000157369.b ENSGT00390000005764 ENSGT00530000063106.B ENSGT00940000155333.A.a.h ENSGT00940000154914 ENSGT00940000160977.e.a ENSGT00940000153424.a.a.c.a.b ENSGT00940000155907.b.b ENSGT00940000157667.d ENSGT00940000158481.d ENSGT00940000156431 Tetraodon MODERN SPECIES 20 large2 (ENSTNIG00000002573) ENSTNIG00000003397 ENSTNIG00000001743 BRSK2 (ENSTNIG00000003396) ENSTNIG00000003395 RASSF7 (ENSTNIG00000003302) guca1g (ENSTNIG00000003301) ENSTNIG00000003300 ENSTNIG00000003299 SHANK2 (ENSTNIG00000004751) CTTN (ENSTNIG00000004752) ppfia1 (ENSTNIG00000004753) ENSTNIG00000004754 ENSTNIG00000004755 ENSTNIG00000004756 arfgap2 (ENSTNIG00000004757) #22 pex16 (ENSTNIG00000004758) cars1 (ENSTNIG00000004759) ccnb2 (ENSTNIG00000004760) crybgx (ENSTNIG00000004761) lctla (ENSTNIG00000004762) tipin (ENSTNIG00000004763) dis3l (ENSTNIG00000004764) ENSTNIG00000004765 ENSTNIG00000003434 dapk2a (ENSTNIG00000003435) HERC1 (ENSTNIG00000003436) tspan18a (ENSTNIG00000003437) cd82a (ENSTNIG00000003438) ube2g1a (ENSTNIG00000015331) cd82a (ENSTNIG00000003439) Fugu MODERN SPECIES 4 ENSTRUG00000033443 STMN4 (ENSTRUG00000026124) ENSTRUG00000030058 large2 (ENSTRUG00000004599) rassf7b (ENSTRUG00000005851) ENSTRUG00000031974 guca1g (ENSTRUG00000006030) ENSTRUG00000028465 ENSTRUG00000031361 SHANK2 (ENSTRUG00000006508) CTTN (ENSTRUG00000007235) ppfia1 (ENSTRUG00000007699) ENSTRUG00000025667 ENSTRUG00000026832 ENSTRUG00000008059 arfgap2 (ENSTRUG00000008070) #22 pex16 (ENSTRUG00000008505) cars1 (ENSTRUG00000008686) ccnb2 (ENSTRUG00000021973) crybgx (ENSTRUG00000009403) lctla (ENSTRUG00000009494) tipin (ENSTRUG00000024319) ENSTRUG00000009956 rab11a (ENSTRUG00000020792) ENSTRUG00000024673 dapk2a (ENSTRUG00000010609) HERC1 (ENSTRUG00000029848) ENSTRUG00000029860 tspan18a (ENSTRUG00000020577) ENSTRUG00000029380 cd82a (ENSTRUG00000011027) Eupecaria_A ANCESTRAL SPECIES 15 ENSGT00940000161238.l ENSGT00940000157661.e.b ENSGT00940000157462.C.c.a ENSGT00940000154390.E.d ENSGT00950000182839.B.b.a ENSGT00390000013260.A.a ENSGT00940000165480.b ENSGT00940000165480.a ENSGT00730000111007.a.b ENSGT00940000153561.a ENSGT00940000153561.b.a.a.b ENSGT00940000158565 ENSGT01050000244900.a.a.b.eb ENSGT00940000163723.A.f.b ENSGT00940000163723.A.e ENSGT00940000155568 #22 ENSGT00390000017790 ENSGT00390000006347.a ENSGT00940000156431 ENSGT00940000155405 ENSGT00940000165890 ENSGT00940000157369.b ENSGT00390000005764 ENSGT00530000063106.B ENSGT00940000155333.A.a.h ENSGT00940000155333.A.a.g.a ENSGT00940000154914 ENSGT00940000160977.e.a ENSGT00940000153424.a.a.c.a.b ENSGT00940000155907.b.b ENSGT00940000157667.d Ballan wrasse MODERN SPECIES 696 arfgap2 (ENSLBEG00000019751) #22 pex16 (ENSLBEG00000019715) cars1 (ENSLBEG00000019633) ccnb2 (ENSLBEG00000019592) crybgx (ENSLBEG00000019567) lctla (ENSLBEG00000019525) tipin (ENSLBEG00000019500) dis3l (ENSLBEG00000019430) Eupecaria_B ANCESTRAL SPECIES 15 ENSGT00940000161238.l ENSGT00940000157661.e.b ENSGT00940000157462.C.c.a ENSGT00940000154390.E.d ENSGT00950000182839.B.b.a ENSGT00390000013260.A.a ENSGT00940000165480.b ENSGT00940000165480.a ENSGT00730000111007.a.b ENSGT00940000153561.a ENSGT00940000153561.b.a.a.b ENSGT00940000158565 ENSGT01050000244900.a.a.b.eb ENSGT00940000163723.A.f.b ENSGT00940000163723.A.e ENSGT00940000155568 #22 ENSGT00390000017790 ENSGT00390000006347.a ENSGT00940000165890 ENSGT00940000157369.b ENSGT00390000005764 ENSGT00530000063106.B ENSGT00940000155333.A.a.h ENSGT00940000155333.A.a.g.a ENSGT00940000154914 ENSGT00940000160977.e.a ENSGT00940000153424.a.a.c.a.b ENSGT00940000155907.b.b ENSGT00940000157667.d ENSGT00940000158481.d ENSGT00940000155405 Eupecaria_C ANCESTRAL SPECIES 11 ENSGT00940000157661.e.b ENSGT00940000157462.C.c.a ENSGT00940000154390.E.d ENSGT00950000182839.B.b.a ENSGT00390000013260.A.a ENSGT00940000165480.b ENSGT00940000165480.a ENSGT00730000111007.a.b ENSGT00940000153561.a ENSGT00940000153561.b.a.a.b ENSGT00940000158565 ENSGT01050000244900.a.a.b.eb ENSGT00940000163723.A.f.b.h ENSGT00940000163723.A.f.a.d ENSGT00940000163723.A.e ENSGT00940000155568 #22 ENSGT00390000017790 ENSGT00390000006347.a ENSGT00940000165890 ENSGT00940000157369.b ENSGT00390000005764 ENSGT00530000063106.B ENSGT00940000155333.A.a.g.a ENSGT00940000154914 ENSGT00940000160977.e.a ENSGT00940000153424.a.a.c.a.b ENSGT00940000155907.b.b ENSGT00940000157667.d ENSGT00940000158481.d ENSGT00940000155405 ENSGT00940000156431 Gilthead seabream MODERN SPECIES 18 ENSSAUG00010022236 ENSSAUG00010022235 ENSSAUG00010022233 ENSSAUG00010022232 ENSSAUG00010022231 guca1g (ENSSAUG00010022229) ENSSAUG00010022228 ENSSAUG00010022227 SHANK2 (ENSSAUG00010022223) CTTN (ENSSAUG00010022156) PPFIA1 (ENSSAUG00010019804) ENSSAUG00010019730 ENSSAUG00010019719 ENSSAUG00010019716 ENSSAUG00010019710 arfgap2 (ENSSAUG00010019616) #22 pex16 (ENSSAUG00010019614) cars1 (ENSSAUG00010019318) ccnb2 (ENSSAUG00010019305) ENSSAUG00010019302 crybgx (ENSSAUG00010019299) lctla (ENSSAUG00010019278) tipin (ENSSAUG00010019272) dis3l (ENSSAUG00010019226) ENSSAUG00010019213 ENSSAUG00010019106 rab11a (ENSSAUG00010019089) ENSSAUG00010019086 dapk2a (ENSSAUG00010018803) HERC1 (ENSSAUG00010018739) tspan18a (ENSSAUG00010018721) Eupercaria_incertae_sedis ANCESTRAL SPECIES 7 ENSGT00940000157661.e.b ENSGT00940000157462.C.c.a ENSGT00940000154390.E.d ENSGT00950000182839.B.b.a ENSGT00390000013260.A.a ENSGT00940000165480.b ENSGT00940000165480.a ENSGT00730000111007.a.b ENSGT00940000153561.a ENSGT00940000153561.b.a.a.b ENSGT00940000158565 ENSGT01050000244900.a.a.b.eb ENSGT00940000163723.A.f.a.c ENSGT00940000163723.A.f.a.d ENSGT00940000163723.A.e ENSGT00940000155568 #22 ENSGT00390000017790 ENSGT00390000006347.a ENSGT00940000165890 ENSGT00940000157369.b ENSGT00390000005764 ENSGT00530000063106.B ENSGT00940000155333.A.a.g.a ENSGT00940000154914 ENSGT00940000153424.a.a.c.a.b ENSGT00940000157667.d ENSGT00940000158481.d ENSGT00940000155405 ENSGT00940000156431 ENSGT00940000164386 ENSGT00390000006922 European seabass MODERN SPECIES 18 ENSDLAG00005019735 rassf7b (ENSDLAG00005016092) ENSDLAG00005030290 ENSDLAG00005029805 ENSDLAG00005016051 ENSDLAG00005034685 ENSDLAG00005028852 ENSDLAG00005034398 SHANK2 (ENSDLAG00005015925) ENSDLAG00005015464 PPFIA1 (ENSDLAG00005010588) ENSDLAG00005003584 ENSDLAG00005034599 ENSDLAG00005003125 ENSDLAG00005010448 ENSDLAG00005010356 #22 ENSDLAG00005010168 ENSDLAG00005009095 ENSDLAG00005009046 crybgx (ENSDLAG00005009036) lctla (ENSDLAG00005008857) tipin (ENSDLAG00005008836) dis3l (ENSDLAG00005008734) ENSDLAG00005023499 RAB11A (ENSDLAG00005030246) ENSDLAG00005030332 ENSDLAG00005032472 ENSDLAG00005022632 ENSDLAG00005031844 ENSDLAG00005022575 ENSDLAG00005022573 Large yellow croaker MODERN SPECIES 480 SHANK2 (ENSLCRG00005004725) ENSLCRG00005004726 ENSLCRG00005004727 ppfia1 (ENSLCRG00005004873) CTTN (ENSLCRG00005016138) trpm4a (ENSLCRG00005016339) ENSLCRG00005016352 ENSLCRG00005016353 ABCC1 (ENSLCRG00005016478) ENSLCRG00005021376 lin7b (ENSLCRG00005021382) ENSLCRG00005021406 ENSLCRG00005021409 ENSLCRG00005021411 ENSLCRG00005021412 arfgap2 (ENSLCRG00005021415) #22 pex16 (ENSLCRG00005021422) cars1 (ENSLCRG00005021469) crybgx (ENSLCRG00005022285) lctla (ENSLCRG00005022287) tipin (ENSLCRG00005022289) ENSLCRG00005022293 MXRA5 (ENSLCRG00005022295) gyg2 (ENSLCRG00005022296) cd99 (ENSLCRG00005022298) ZBED1 (ENSLCRG00005022301) ZBED1 (ENSLCRG00005022307) dhrsx (ENSLCRG00005022308) sowahcb (ENSLCRG00005022309) cep70 (ENSLCRG00005022311) adarb1a (ENSLCRG00005022316) Perciformes ANCESTRAL SPECIES 15 ENSGT00940000157661.e.b ENSGT00940000157462.C.c.a ENSGT00940000154390.E.d ENSGT00950000182839.B.b.a ENSGT00390000013260.A.a ENSGT00940000165480.b ENSGT00940000165480.a ENSGT00730000111007.a.b ENSGT00940000153561.a ENSGT00940000153561.b.a.a.b ENSGT00940000158565 ENSGT01050000244900.a.a.b.eb ENSGT00940000163723.A.f.b ENSGT00940000166122 ENSGT00940000163723.A.e ENSGT00940000155568 #22 ENSGT00390000017790 ENSGT00390000006347.a ENSGT00940000156431 ENSGT00940000155405 ENSGT00940000165890 ENSGT00940000157369.b ENSGT00390000005764 ENSGT00530000063106.B ENSGT00940000155333.A.a.h ENSGT00940000154914 ENSGT00940000160977.e.a ENSGT00940000153424.a.a.c.a.b ENSGT00940000155907.b.b ENSGT00940000157667.d ENSGT00940000158481.d Cottioidei ANCESTRAL SPECIES 72 ENSGT00950000183172.C ENSGT00940000158758 ENSGT00940000165402 ENSGT00940000161238.l ENSGT00940000157462.C.c.a ENSGT00950000182839.B.b.a ENSGT00940000165480.b ENSGT00940000165480.a ENSGT00730000111007.a.b ENSGT00940000153561.b.a.a.b ENSGT00940000158565 ENSGT01050000244900.a.a.b.eb ENSGT00940000163723.A.f.b ENSGT00940000166122 ENSGT00940000163723.A.e ENSGT00940000155568 #22 ENSGT00390000017790 ENSGT00390000006347.a ENSGT00940000155405.v ENSGT00940000165890 ENSGT00940000157369.b ENSGT00390000005764 ENSGT00530000063106.B ENSGT00940000155333.A.a.h ENSGT00940000154914 ENSGT00940000160977.e.a ENSGT00940000153424.a.a.c.a.b Lumpfish MODERN SPECIES 18 ENSCLMG00005003408 ENSCLMG00005003410 ENSCLMG00005003411 ENSCLMG00005003412 ENSCLMG00005003428 TSPAN18 (ENSCLMG00005003451) ENSCLMG00005003975 ENSCLMG00005003976 RASSF7 (ENSCLMG00005003977) ENSCLMG00005003978 ENSCLMG00005003980 ENSCLMG00005003986 CTTN (ENSCLMG00005004094) PPFIA1 (ENSCLMG00005004167) ENSCLMG00005009443 arfgap2 (ENSCLMG00005009444) #22 pex16 (ENSCLMG00005009449) cars1 (ENSCLMG00005009487) ENSCLMG00005012023 crybgx (ENSCLMG00005012024) lctla (ENSCLMG00005012029) ENSCLMG00005012144 tipin (ENSCLMG00005012145) dis3l (ENSCLMG00005012152) ENSCLMG00005012638 ENSCLMG00005012640 ENSCLMG00005012658 ENSCLMG00005012659 rab11a (ENSCLMG00005012660) ENSCLMG00005012674 ENSCLMG00005012717 Stickleback MODERN SPECIES 1 ENSGACG00000017199 taldo1 (ENSGACG00000017200) ENSGACG00000017234 ENSGACG00000017236 ENSGACG00000017240 ENSGACG00000017242 ENSGACG00000017243 ENSGACG00000017245 ctsd (ENSGACG00000017247) ENSGACG00000017254 ENSGACG00000017256 ENSGACG00000017259 ENSGACG00000017261 ENSGACG00000017264 ENSGACG00000017266 arfgap2 (ENSGACG00000017267) #22 pex16 (ENSGACG00000017273) cars1 (ENSGACG00000017279) ccnb2 (ENSGACG00000017292) crybgx (ENSGACG00000017294) ENSGACG00000017296 ENSGACG00000017297 ENSGACG00000017302 dapk2a (ENSGACG00000017307) ENSGACG00000017310 ENSGACG00000017313 dis3l (ENSGACG00000017315) socs4 (ENSGACG00000017319) wdhd1 (ENSGACG00000017321) gch1 (ENSGACG00000017325) ENSGACG00000017331 Perciformes_a ANCESTRAL SPECIES 55 ENSGT00940000165402 ENSGT00940000161238.l ENSGT00940000157661.e.b ENSGT00940000157462.C.c.a ENSGT00940000154390.E.d ENSGT00950000182839.B.b.a ENSGT00390000013260.A.a ENSGT00940000165480.b ENSGT00940000165480.a ENSGT00730000111007.a.b ENSGT00940000153561.a ENSGT00940000153561.b.a.a.b ENSGT00940000158565 ENSGT01050000244900.a.a.b.eb ENSGT00940000163723.A.f.a.d ENSGT00940000155568 #22 ENSGT00390000017790 ENSGT00390000006347.a ENSGT00940000156431 ENSGT00940000155405 ENSGT00940000165890 ENSGT00940000157369.b ENSGT00390000005764 ENSGT00530000063106.B ENSGT00940000155333.A.a.h ENSGT00940000154914 ENSGT00940000160977.e.a ENSGT00940000153424.a.a.c.a.b ENSGT00940000155907.b.b ENSGT00940000157667.d Channel bull blenny MODERN SPECIES 17 ENSCGOG00000000883 ENSCGOG00000000890 ENSCGOG00000000955 ENSCGOG00000000959 SLCO3A1 (ENSCGOG00000000962) ENSCGOG00000001000 ENSCGOG00000001003 ENSCGOG00000001011 ENSCGOG00000001014 GLO1 (ENSCGOG00000001016) eprs1 (ENSCGOG00000001039) TDP1 (ENSCGOG00000001479) hmbox1a (ENSCGOG00000001525) KIF13B (ENSCGOG00000001573) ENSCGOG00000003070 arfgap2 (ENSCGOG00000003096) #22 pex16 (ENSCGOG00000003590) cars1 (ENSCGOG00000003638) ccnb2 (ENSCGOG00000005301) crybgx (ENSCGOG00000005309) lctla (ENSCGOG00000005318) tipin (ENSCGOG00000005347) dis3l (ENSCGOG00000005362) ENSCGOG00000005992 rab11a (ENSCGOG00000006701) ENSCGOG00000006769 dapk2a (ENSCGOG00000006770) HERC1 (ENSCGOG00000006815) ENSCGOG00000007543 tspan18a (ENSCGOG00000007545) cd82a (ENSCGOG00000007609) Pike perch MODERN SPECIES 42 ABTB2 (ENSSLUG00000020878) BRSK2 (ENSSLUG00000020866) ENSSLUG00000020862 URGCP (ENSSLUG00000020857) ENSSLUG00000020853 ENSSLUG00000020850 ENSSLUG00000020848 guca1g (ENSSLUG00000020844) ENSSLUG00000020807 ENSSLUG00000020780 ENSSLUG00000020774 SHANK2 (ENSSLUG00000020771) CTTN (ENSSLUG00000020629) ppfia1 (ENSSLUG00000014829) ENSSLUG00000014557 arfgap2 (ENSSLUG00000014518) #22 pex16 (ENSSLUG00000014500) cars1 (ENSSLUG00000009586) ccnb2 (ENSSLUG00000009411) crybgx (ENSSLUG00000009402) lctla (ENSSLUG00000009393) tipin (ENSSLUG00000009385) dis3l (ENSSLUG00000009340) ENSSLUG00000009292 rab11a (ENSSLUG00000009263) ENSSLUG00000009257 dapk2a (ENSSLUG00000009254) ENSSLUG00000009230 TSPAN18 (ENSSLUG00000009223) cd82a (ENSSLUG00000009215) ccnb2 (ENSSLUG00000009207) Otomorpha ANCESTRAL SPECIES 6 ENSGT00940000161262.a ENSGT00390000013899.b ENSGT00390000013315 ENSGT00940000157530.b.b ENSGT00940000157530.b.a ENSGT00390000013260.A.a ENSGT00940000165480.b ENSGT00940000165480.a ENSGT00730000111007.a.b ENSGT00940000164361 ENSGT00940000153561.b.a.a.b ENSGT00940000158565 ENSGT01050000244900.a.a.b ENSGT00940000163723.A.f.b ENSGT00940000163723.A.e ENSGT00940000155568 #22 ENSGT00940000165402 ENSGT00390000017790 ENSGT00940000158758 ENSGT00940000162283.b ENSGT00940000154022.a.a ENSGT00940000156734.b ENSGT00390000004456 ENSGT00940000158268.a ENSGT00440000037417.A ENSGT00950000182976.a.b.d ENSGT00390000006758.b Otophysi ANCESTRAL SPECIES 134 ENSGT00940000155568 #22 ENSGT00940000165402 ENSGT00390000017790 ENSGT00940000158758 ENSGT00940000162283.b ENSGT00940000154022.a.a ENSGT00940000156734.b ENSGT00390000004456 ENSGT00940000158268.a ENSGT00440000037417.A ENSGT00950000182976.a.b.d ENSGT00390000006758.b ENSGT00390000016972 ENSGT00940000155470.b ENSGT00940000160400 ENSGT00950000182903.a.a.c Characiphysae ANCESTRAL SPECIES 66 ENSGT00940000153892.A ENSGT00940000160667 ENSGT00940000166395 ENSGT00940000160358 ENSGT00390000005773 ENSGT00940000161494 ENSGT00940000160518 ENSGT00940000174677 ENSGT00940000159183 ENSGT00390000003107.b.j ENSGT00940000158292.b ENSGT00940000166238.a ENSGT00940000156119 ENSGT00510000046760.a.ab ENSGT00390000013786 ENSGT00940000155568 #22 ENSGT00940000165402 ENSGT00390000017790 ENSGT00940000158758 ENSGT00940000162283.b ENSGT00940000154022.a.a ENSGT00940000156734.b ENSGT00390000004456 ENSGT00940000158268.a ENSGT00440000037417.A ENSGT00950000182976.a.b.d ENSGT00390000006758.b ENSGT00390000016972 ENSGT00940000155470.b ENSGT00940000160400 ENSGT00950000182903.a.a.c Channel catfish MODERN SPECIES 23 siae (ENSIPUG00000011900) clasrp (ENSIPUG00000011928) znf296 (ENSIPUG00000011956) ENSIPUG00000011968 fosb (ENSIPUG00000012056) c4h19orf47 (ENSIPUG00000012092) ttc9b (ENSIPUG00000012108) map3k10 (ENSIPUG00000012119) sipa1l3 (ENSIPUG00000012143) qpctla (ENSIPUG00000012203) six9 (ENSIPUG00000012212) six5 (ENSIPUG00000012233) tbcb (ENSIPUG00000012250) yap1 (ENSIPUG00000012368) cep126 (ENSIPUG00000012388) arfgap2 (ENSIPUG00000012424) #22 ENSIPUG00000012466 pex16 (ENSIPUG00000012495) large2 (ENSIPUG00000012569) ENSIPUG00000012677 kifc3 (ENSIPUG00000012716) wt1b (ENSIPUG00000012895) eif3m (ENSIPUG00000012938) prrg4 (ENSIPUG00000013041) qser1 (ENSIPUG00000013066) depdc7 (ENSIPUG00000013087) CSTF3 (ENSIPUG00000013170) rpl35a (ENSIPUG00000013354) abcc5 (ENSIPUG00000013413) RNPEPL1 (ENSIPUG00000013502) DVL3 (ENSIPUG00000013533) Characiphysae_b ANCESTRAL SPECIES 72 ENSGT00940000153892.A ENSGT00940000160667 ENSGT00940000166395 ENSGT00940000160358 ENSGT00390000005773 ENSGT00940000161494 ENSGT00940000160518 ENSGT00940000174677 ENSGT00940000159183 ENSGT00390000003107.b.j ENSGT00940000158292.b ENSGT00940000166238.a ENSGT00940000156119 ENSGT00510000046760.a.ab ENSGT00390000013786 ENSGT00940000155568 #22 ENSGT00940000165402 ENSGT00390000017790 ENSGT00940000158758 ENSGT00940000162283.b ENSGT00940000154022.a.a ENSGT00940000156734.b ENSGT00390000004456 ENSGT00940000158268.a ENSGT00440000037417.A ENSGT00950000182976.a.b.d ENSGT00390000006758.b ENSGT00390000016972 ENSGT00940000155470.b ENSGT00940000160400 ENSGT00950000182903.a.a.c Electric eel MODERN SPECIES 190 clasrp (ENSEEEG00000015845) ENSEEEG00000015842 ENSEEEG00000015841 ENSEEEG00000015840 fosb (ENSEEEG00000015837) si:ch211-160d20.3 (ENSEEEG00000015836) ttc9b (ENSEEEG00000015835) MAP3K10 (ENSEEEG00000015820) ENSEEEG00000015818 qpctla (ENSEEEG00000015786) six9 (ENSEEEG00000015785) six5 (ENSEEEG00000015784) tbcb (ENSEEEG00000015783) yap1 (ENSEEEG00000015782) ENSEEEG00000015781 arfgap2 (ENSEEEG00000015744) #22 ENSEEEG00000015740 pex16 (ENSEEEG00000015735) large2 (ENSEEEG00000015238) Characoidei ANCESTRAL SPECIES 76 ENSGT00940000153892.A ENSGT00940000160667 ENSGT00940000166395 ENSGT00940000160358 ENSGT00390000005773 ENSGT00940000161494 ENSGT00940000160518 ENSGT00940000174677 ENSGT00940000159183 ENSGT00390000003107.b.j ENSGT00940000158292.b ENSGT00940000166238.a ENSGT00940000156119 ENSGT00510000046760.a.ab ENSGT00390000013786 ENSGT00940000155568 #22 ENSGT00940000165402 ENSGT00390000017790 ENSGT00940000158758 ENSGT00940000162283.b ENSGT00940000154022.a.a ENSGT00940000156734.b ENSGT00390000004456 ENSGT00940000158268.a ENSGT00440000037417.A ENSGT00950000182976.a.b.d ENSGT00390000006758.b ENSGT00390000016972 ENSGT00940000155470.b ENSGT00940000160400 ENSGT00950000182903.a.a.c Red-bellied piranha MODERN SPECIES 135 clasrp (ENSPNAG00000019075) znf296 (ENSPNAG00000003573) ENSPNAG00000019158 fosb (ENSPNAG00000019210) si:ch211-160d20.3 (ENSPNAG00000019248) ttc9b (ENSPNAG00000019267) MAP3K10 (ENSPNAG00000019349) ENSPNAG00000019365 SIPA1L3 (ENSPNAG00000019408) qpctla (ENSPNAG00000019429) six9 (ENSPNAG00000019447) six5 (ENSPNAG00000019453) tbcb (ENSPNAG00000019461) yap1 (ENSPNAG00000019515) ENSPNAG00000019548 arfgap2 (ENSPNAG00000019585) #22 ENSPNAG00000019630 pex16 (ENSPNAG00000019643) ENSPNAG00000019654 large2 (ENSPNAG00000003607) ENSPNAG00000019835 KIFC3 (ENSPNAG00000019956) wt1b (ENSPNAG00000019996) eif3m (ENSPNAG00000020059) prrg4 (ENSPNAG00000020078) QSER1 (ENSPNAG00000020097) depdc7a (ENSPNAG00000020112) cstf3 (ENSPNAG00000020182) rpl35a (ENSPNAG00000020201) abcc5 (ENSPNAG00000020320) rnpepl1 (ENSPNAG00000020382) Mexicana tetra MODERN SPECIES 115 ENSAMXG00000031175 arfgap2 (ENSAMXG00000043447) #22 ENSAMXG00000001348 pex16 (ENSAMXG00000008446) large2 (ENSAMXG00000017259) ENSAMXG00000036966 ENSAMXG00000014344 KIFC3 (ENSAMXG00000014323) wt1b (ENSAMXG00000039805) eif3m (ENSAMXG00000014287) prrg4 (ENSAMXG00000032262) QSER1 (ENSAMXG00000036761) depdc7a (ENSAMXG00000043313) cstf3 (ENSAMXG00000014198) rpl35a (ENSAMXG00000041448) ENSAMXG00000041419 abcc5 (ENSAMXG00000014147) Cyprinoidei ANCESTRAL SPECIES 12 ENSGT00940000157114 ENSGT00940000158740 ENSGT00530000063252.a.a ENSGT00940000164481.b.b.h ENSGT00940000158721 ENSGT00940000161445 ENSGT00390000014682 ENSGT00940000159112.b ENSGT00940000159256.o ENSGT00390000005826.a.a ENSGT00940000161895 ENSGT00950000182942.b.f.a ENSGT00940000158035 ENSGT00390000010215.B ENSGT00550000074936 ENSGT00940000155568 #22 ENSGT00940000165402 ENSGT00390000017790 ENSGT00940000158758 ENSGT00940000162283.b ENSGT00940000154022.a.a ENSGT00940000156734.b ENSGT00390000004456 ENSGT00940000158268.a ENSGT00440000037417.A ENSGT00950000182976.a.b.d ENSGT00390000006758.b ENSGT00390000016972 ENSGT00940000155470.b ENSGT00940000160400 ENSGT00950000182903.a.a.c Cyprininae DUPLICATION Cyprininae DUPLICATION Cyprininae ANCESTRAL SPECIES 78 ENSGT00940000158740.c ENSGT00530000063252.a.a.d.a ENSGT00940000164481.b.b.h.b ENSGT00940000158721.e ENSGT00940000161445.c.a.b ENSGT00390000014682.z ENSGT00940000159112.b.n ENSGT00940000159256.o.p.b ENSGT00390000005826.a.a.k.b ENSGT00940000161895.c ENSGT01100000263571.i.a.b.g.a ENSGT00950000182942.b.f.a.d ENSGT00940000158035.d ENSGT00390000010215.B.m ENSGT00550000074936.g ENSGT00940000155568.m.a #22 ENSGT00940000165402 ENSGT00950000182942.b.f.a.c ENSGT00940000158035.c ENSGT00390000010215.B.n ENSGT00550000074936.h ENSGT00940000155568.n #22 ENSGT00940000163443.m.a.b ENSGT00390000017790.a ENSGT00940000158758.g ENSGT00940000162283.b ENSGT00940000154022.a.a.d ENSGT00940000156734.b.b ENSGT00390000004456.e ENSGT00940000158268.a.h ENSGT00440000037417.A.d Cyprininae_a ANCESTRAL SPECIES 105 ENSGT00940000158740.d ENSGT00530000063252.a.a.d.b ENSGT00940000164481.b.b.h.a ENSGT00940000158721.f ENSGT00940000161445.c.a.a ENSGT00390000014682.y ENSGT00940000159112.b.m ENSGT00940000159256.o.p.a ENSGT00390000005826.a.a.k.a ENSGT00940000161895.d ENSGT01100000263571.i.a.b.g.b ENSGT00950000182942.b.f.a.d ENSGT00940000158035.d ENSGT00390000010215.B.m ENSGT00550000074936.g ENSGT00940000155568.m.a #22 ENSGT00940000165402 ENSGT00390000017790.b ENSGT00940000158758.h ENSGT00940000154824.f ENSGT00940000154022.a.a.c ENSGT00940000156734.b.a ENSGT00390000004456.f ENSGT00940000158268.a.g ENSGT00440000037417.A.c ENSGT00950000182976.a.b.d.c ENSGT00390000006758.a.a.a ENSGT00940000155470.b.a ENSGT00940000160400.f ENSGT00940000160400.e ENSGT00950000182903.a.a.c.c Common carp reference MODERN SPECIES 9 aplp2 (ENSCCRG00000063896) st14a (ENSCCRG00000052455) dhx34 (ENSCCRG00000060381) spred3 (ENSCCRG00000064105) psmd8 (ENSCCRG00000075418) ENSCCRG00000071236 ehd2b (ENSCCRG00000037630) napab (ENSCCRG00000037649) ENSCCRG00000053687 ENSCCRG00000052859 ENSCCRG00000019429 ENSCCRG00000078610 ilvbl (ENSCCRG00000063266) ENSCCRG00000001894 ENSCCRG00000001887 arfgap2 (ENSCCRG00000001781) #22 ENSCCRG00000061590 pex16 (ENSCCRG00000041455) large2 (ENSCCRG00000040106) ENSCCRG00000051238 ENSCCRG00000036195 ENSCCRG00000031646 wt1b (ENSCCRG00000066394) eif3m (ENSCCRG00000069231) prrg4 (ENSCCRG00000060010) QSER1 (ENSCCRG00000036172) depdc7a (ENSCCRG00000036181) ENSCCRG00000071202 abcc5 (ENSCCRG00000009261) rnpepl1 (ENSCCRG00000015841) ENSCCRG00000003021 Goldfish MODERN SPECIES 37 cdon (ENSCARG00000069585) prdm10 (ENSCARG00000069479) aplp2 (ENSCARG00000069070) st14a (ENSCARG00000068949) spred3 (ENSCARG00000068929) ENSCARG00000068921 ehd2b (ENSCARG00000068914) psmd8 (ENSCARG00000068909) napab (ENSCARG00000068884) ENSCARG00000068876 ENSCARG00000068869 ilvbl (ENSCARG00000068457) FAM118B (ENSCARG00000068403) SRPRA (ENSCARG00000068369) ENSCARG00000068353 arfgap2 (ENSCARG00000068066) #22 ENSCARG00000068045 pex16 (ENSCARG00000068032) ENSCARG00000068029 large2 (ENSCARG00000067584) ENSCARG00000067528 KIRREL3 (ENSCARG00000067082) BARX2 (ENSCARG00000067025) rbm7 (ENSCARG00000067012) ENSCARG00000067001 GRAMD1B (ENSCARG00000066690) ENSCARG00000066671 ENSCARG00000066666 ENSCARG00000066661 dner (ENSCARG00000066463) pid1 (ENSCARG00000066427) Cyprininae ANCESTRAL SPECIES ENSGT00940000155568.m.b #22 Cyprininae_a ANCESTRAL SPECIES ENSGT00940000155568.m.b #22 Golden-line barbel MODERN SPECIES 979 dhx34 (ENSSGRG00000002166) spred3 (ENSSGRG00000002143) psmd8 (ENSSGRG00000002084) ENSSGRG00000002077 ehd2b (ENSSGRG00000002072) napab (ENSSGRG00000001396) eif2ak1 (ENSSGRG00000001237) ENSSGRG00000001215 ENSSGRG00000001202 ENSSGRG00000052087 ENSSGRG00000052086 ENSSGRG00000052084 ilvbl (ENSSGRG00000052053) FAM118B (ENSSGRG00000052052) SRPRA (ENSSGRG00000052051) arfgap2 (ENSSGRG00000052049) #22 ENSSGRG00000052048 pex16 (ENSSGRG00000052046) ENSSGRG00000052045 Goldfish MODERN SPECIES 1580 FAM118B (ENSCARG00000044585) SRPRA (ENSCARG00000044624) ENSCARG00000044653 ENSCARG00000044661 #22 Cyprininae ANCESTRAL SPECIES 78 ENSGT00940000159112.b.n ENSGT00940000159256.o.p.b ENSGT00390000005826.a.a.k.b ENSGT00940000161895.c ENSGT01100000263571.i.a.b.g.a ENSGT00950000182942.b.f.a.d ENSGT00940000158035.d ENSGT00390000010215.B.m ENSGT00550000074936.g ENSGT00940000155568.m.a #22 ENSGT00940000165402 ENSGT00950000182942.b.f.a.c ENSGT00940000158035.c ENSGT00390000010215.B.n ENSGT00550000074936.h ENSGT00940000155568.n #22 ENSGT00940000163443.m.a.b ENSGT00390000017790.a ENSGT00940000158758.g ENSGT00940000162283.b ENSGT00940000154022.a.a.d ENSGT00940000156734.b.b ENSGT00390000004456.e ENSGT00940000158268.a.h ENSGT00440000037417.A.d ENSGT00950000182976.a.b.d.d Cyprininae_a ANCESTRAL SPECIES 225 ENSGT00940000161445.d ENSGT00390000014682.z ENSGT00940000159112.b.n ENSGT00940000159256.o.p.b ENSGT00390000005826.a.a.k.b ENSGT00940000161895.c ENSGT01100000263571.i.a.b.g.a ENSGT00950000182942.b.f.a.c ENSGT00940000158035.c ENSGT00390000010215.B.n ENSGT00550000074936.h ENSGT00940000155568.n #22 ENSGT00940000163443.m.a.b ENSGT00390000017790.a ENSGT00940000158758.g ENSGT00940000162283.b ENSGT00940000154022.a.a.d ENSGT00940000156734.b.b ENSGT00390000004456.e ENSGT00940000158268.a.h ENSGT00440000037417.A.d ENSGT00950000182976.a.b.d.d ENSGT00390000006758.a.a.b ENSGT00390000016972.l ENSGT00940000155470.b.b ENSGT00950000182903.a.a.c.d ENSGT00940000159223.c.b Common carp reference MODERN SPECIES 19 aplp2 (ENSCCRG00000003432) st14a (ENSCCRG00000003186) dhx34 (ENSCCRG00000061019) psmd8 (ENSCCRG00000037915) ENSCCRG00000053791 ehd2b (ENSCCRG00000060623) napab (ENSCCRG00000038620) ENSCCRG00000067774 ENSCCRG00000060344 ENSCCRG00000061302 ENSCCRG00000006131 ENSCCRG00000006122 ilvbl (ENSCCRG00000073030) ENSCCRG00000000204 ENSCCRG00000070721 arfgap2 (ENSCCRG00000041340) #22 ENSCCRG00000019217 pex16 (ENSCCRG00000001711) large2 (ENSCCRG00000040424) ENSCCRG00000069795 ENSCCRG00000059269 ENSCCRG00000023751 wt1b (ENSCCRG00000031969) eif3m (ENSCCRG00000032797) prrg4 (ENSCCRG00000032828) QSER1 (ENSCCRG00000032832) depdc7a (ENSCCRG00000032837) cstf3 (ENSCCRG00000032865) rpl35a (ENSCCRG00000009315) abcc5 (ENSCCRG00000053693) rnpepl1 (ENSCCRG00000020950) Golden-line barbel MODERN SPECIES 520 bcl9l (ENSSGRG00000031668) cdon (ENSSGRG00000031675) prdm10 (ENSSGRG00000031692) aplp2 (ENSSGRG00000031709) st14a (ENSSGRG00000031946) spred3 (ENSSGRG00000031947) psmd8 (ENSSGRG00000031949) BICRA (ENSSGRG00000031968) ehd2b (ENSSGRG00000031977) napab (ENSSGRG00000031980) ENSSGRG00000031981 ENSSGRG00000031983 ENSSGRG00000031984 ilvbl (ENSSGRG00000031986) SRPRA (ENSSGRG00000031996) arfgap2 (ENSSGRG00000032078) #22 ENSSGRG00000032405 ITLN1 (ENSSGRG00000032408) pex16 (ENSSGRG00000032589) large2 (ENSSGRG00000032627) Goldfish DUPLICATION Goldfish MODERN SPECIES 9 aplp2 (ENSCARG00000058687) st14a (ENSCARG00000058138) dhx34 (ENSCARG00000057595) spred3 (ENSCARG00000057555) psmd8 (ENSCARG00000057528) BICRA (ENSCARG00000057489) ehd2b (ENSCARG00000057461) napab (ENSCARG00000057340) ENSCARG00000057319 ENSCARG00000057308 ENSCARG00000057266 ENSCARG00000057138 ilvbl (ENSCARG00000053775) FAM118B (ENSCARG00000053557) SRPRA (ENSCARG00000053510) arfgap2 (ENSCARG00000053357) #22 ENSCARG00000053326 pex16 (ENSCARG00000053293) large2 (ENSCARG00000053014) KIFC3 (ENSCARG00000052913) wt1b (ENSCARG00000052839) eif3m (ENSCARG00000052731) prrg4 (ENSCARG00000052701) QSER1 (ENSCARG00000052686) depdc7a (ENSCARG00000052650) cstf3 (ENSCARG00000051363) rpl35a (ENSCARG00000051257) ABCC5a (ENSCARG00000047885) rnpepl1 (ENSCARG00000047458) DVL3 (ENSCARG00000046684) ap2m1b (ENSCARG00000045760) Goldfish MODERN SPECIES 1646 arfgap2 (ENSCARG00000033922) #22 ENSCARG00000034004 pex16 (ENSCARG00000034098) Zebrafish MODERN SPECIES 9 si:ch211-151h10.2 (ENSDARG00000068250) prdm10 (ENSDARG00000104251) aplp2 (ENSDARG00000054864) st14a (ENSDARG00000061173) dhx34 (ENSDARG00000061168) spred3 (ENSDARG00000040358) psmd8 (ENSDARG00000020454) BICRA (ENSDARG00000061159) ehd2b (ENSDARG00000040362) napab (ENSDARG00000020405) ENSDARG00000068219 ENSDARG00000034941 ilvbl (ENSDARG00000017126) FAM118B (ENSDARG00000078983) SRPRA (ENSDARG00000061124) arfgap2 (ENSDARG00000067601) #22 ENSDARG00000102234 pex16 (ENSDARG00000058202) large2 (ENSDARG00000017058) ENSDARG00000068242 KIFC3 (ENSDARG00000054978) wt1b (ENSDARG00000007990) eif3m (ENSDARG00000013931) prrg4 (ENSDARG00000030753) QSER1 (ENSDARG00000074750) depdc7a (ENSDARG00000055043) cstf3 (ENSDARG00000018904) rpl35a (ENSDARG00000088030) abcc5 (ENSDARG00000061233) rnpepl1 (ENSDARG00000007813) DVL3 (ENSDARG00000103462) Clupeiformes ANCESTRAL SPECIES 160 ENSGT00940000159073 ENSGT00390000013315 ENSGT00940000161262.a ENSGT00940000157530.b.b ENSGT00940000157530.b.a ENSGT00390000013260.A.a ENSGT00940000165480.b ENSGT00940000165480.a ENSGT00730000111007.a.b ENSGT00940000164361.a ENSGT00940000153561.b.a.a.b ENSGT00940000158565 ENSGT01050000244900.a.a.b ENSGT00940000163723.A.f.b ENSGT00940000163723.A.e ENSGT00940000155568 #22 ENSGT00940000165402 ENSGT00390000017790 ENSGT00940000158758 ENSGT00940000162283.b ENSGT00940000154022.a.a ENSGT00940000156734.b ENSGT00390000004456 ENSGT00940000158268.a ENSGT00440000037417.A ENSGT00950000182976.a.b.d ENSGT00390000006758.b ENSGT00390000017491 ENSGT00940000155817.a.a ENSGT00940000156433.A ENSGT00940000156267.ob.a.a Denticle herring MODERN SPECIES 7 PLEKHA7 (ENSDCDG00000009236) rps13 (ENSDCDG00000009136) cstf3 (ENSDCDG00000006804) depdc7a (ENSDCDG00000006442) QSER1 (ENSDCDG00000006286) prrg4 (ENSDCDG00000006202) eif3m (ENSDCDG00000006102) wt1b (ENSDCDG00000005959) ENSDCDG00000005819 acte1 (ENSDCDG00000005628) ENSDCDG00000035717 CTTN (ENSDCDG00000035695) ppfia1 (ENSDCDG00000035452) ENSDCDG00000035387 ENSDCDG00000035386 arfgap2 (ENSDCDG00000035382) #22 ENSDCDG00000035380 pex16 (ENSDCDG00000035379) ENSDCDG00000035378 large2 (ENSDCDG00000035347) ENSDCDG00000035236 KIFC3 (ENSDCDG00000035185) ENSDCDG00000035177 guca1g (ENSDCDG00000035172) ENSDCDG00000035170 ENSDCDG00000035168 chst1 (ENSDCDG00000035167) slc35c1 (ENSDCDG00000035166) CRY2 (ENSDCDG00000035147) MAPK8IP1 (ENSDCDG00000035135) lrp4 (ENSDCDG00000034874) #24 Atlantic herring MODERN SPECIES 22 ENSCHAG00000010117 slc35c1 (ENSCHAG00000010142) CHST1 (ENSCHAG00000010152) ENSCHAG00000010161 ENSCHAG00000010323 ENSCHAG00000010328 ENSCHAG00000010344 ENSCHAG00000010352 ENSCHAG00000010370 ENSCHAG00000010556 ENSCHAG00000010585 CTTN (ENSCHAG00000011070) ENSCHAG00000013262 ppfia1 (ENSCHAG00000013547) ENSCHAG00000022255 arfgap2 (ENSCHAG00000022309) #22 ENSCHAG00000022581 pex16 (ENSCHAG00000022595) large2 (ENSCHAG00000022634) ENSCHAG00000023099 KIFC3 (ENSCHAG00000023121) wt1b (ENSCHAG00000023341) eif3m (ENSCHAG00000023358) prrg4 (ENSCHAG00000023387) QSER1 (ENSCHAG00000023395) depdc7a (ENSCHAG00000023431) cstf3 (ENSCHAG00000023488) rps13 (ENSCHAG00000024029) PLEKHA7 (ENSCHAG00000024081) sox6 (ENSCHAG00000024518) PDE3B (ENSCHAG00000024777) Cyclostomata ANCESTRAL SPECIES ENSGT00940000155568 #22 Lamprey MODERN SPECIES 1939 cwf19l1 (ENSPMAG00000002331) emc10 (ENSPMAG00000002320) sycp3 (ENSPMAG00000002313) arfgap2 (ENSPMAG00000002295) #22