Euteleostomi	ANCESTRAL SPECIES	521													ENSGT00390000008565.a #19	ENSGT00390000013112 #20	ENSGT01060000248556.A.a.a.a #21	ENSGT00390000011500 #22	ENSGT00900000141021.b.a #23	ENSGT00390000008371.b #24	ENSGT00390000006784 #25
Sarcopterygii	ANCESTRAL SPECIES	82	ENSGT00940000153877	ENSGT00940000156902 #7	ENSGT00530000063187.A #8	ENSGT00940000158674 #9	ENSGT00940000160987 #10	ENSGT00390000016537 #11	ENSGT00940000158797 #12	ENSGT00940000154043.A #13	ENSGT00390000006287 #14	ENSGT00390000004067 #15	ENSGT00390000005742 #16	ENSGT00940000155841 #18	ENSGT00390000008565.a #19	ENSGT00390000013112 #20	ENSGT01060000248556.A.a.a.a #21	ENSGT00390000011500 #22	ENSGT00900000141021.b.a #23	ENSGT00390000008371.b #24	ENSGT00390000006784 #25	ENSGT00940000161643	ENSGT00390000011980.b.b #26	ENSGT00950000182888.a.a.a.j.a #27	ENSGT00390000009787 #29	ENSGT00940000158829 #30
Tetrapoda	ANCESTRAL SPECIES	34	ENSGT00940000153877	ENSGT00940000156902 #7	ENSGT00530000063187.A #8	ENSGT00940000158674 #9	ENSGT00940000160987 #10	ENSGT00390000016537 #11	ENSGT00940000158797 #12	ENSGT00940000154043.A #13	ENSGT00390000006287 #14	ENSGT00390000004067 #15	ENSGT00390000005742 #16	ENSGT00940000155841 #18	ENSGT00390000008565.a #19	ENSGT00390000013112 #20	ENSGT01060000248556.A.a.a.a #21	ENSGT00390000011500 #22	ENSGT00900000141021.b.a #23	ENSGT00390000008371.b #24	ENSGT00390000006784 #25	ENSGT00940000161643	ENSGT00390000011980.b.b #26	ENSGT00950000182888.a.a.a.j.a #27	ENSGT00390000009787 #29	ENSGT00940000158829 #30	ENSGT00950000183047.d #31	ENSGT00940000160451 #32	ENSGT00940000166915	ENSGT00390000004524 #34	ENSGT00940000156744 #35	ENSGT00940000161616 #36	ENSGT00940000153596.B #37
Amniota	ANCESTRAL SPECIES	27	ENSGT00940000153877	ENSGT00940000156902 #7	ENSGT00530000063187.A #8	ENSGT00940000158674 #9	ENSGT00940000160987 #10	ENSGT00390000016537 #11	ENSGT00940000158797 #12	ENSGT00940000154043.A #13	ENSGT00390000006287 #14	ENSGT00390000004067 #15	ENSGT00390000005742 #16	ENSGT00940000155841 #18	ENSGT00390000008565.a #19	ENSGT00390000013112 #20	ENSGT01060000248556.A.a.a.a #21	ENSGT00390000011500 #22	ENSGT00900000141021.b.a #23	ENSGT00390000008371.b #24	ENSGT00390000006784 #25	ENSGT00940000161643	ENSGT00390000011980.b.b #26	ENSGT00950000182888.a.a.a.j.a #27	ENSGT00950000182888.a.a.a.j.b #28	ENSGT00390000009787 #29	ENSGT00940000158829 #30	ENSGT00950000183047.d #31	ENSGT00940000160451 #32	ENSGT00940000154645.B	ENSGT00940000162328	ENSGT00960000189405	ENSGT00940000163010 #33
Mammalia	ANCESTRAL SPECIES	23	ENSGT00940000161818	ENSGT00940000156902 #7	ENSGT00530000063187.A #8	ENSGT00940000158674 #9	ENSGT00940000160987 #10	ENSGT00390000016537 #11	ENSGT00940000158797 #12	ENSGT00940000154043.A #13	ENSGT00390000006287 #14	ENSGT00390000004067 #15	ENSGT00390000005742 #16	ENSGT00940000155841 #18	ENSGT00390000008565.a #19	ENSGT00390000013112 #20	ENSGT01060000248556.A.a.a.a #21	ENSGT00390000011500 #22	ENSGT00900000141021.b.a #23	ENSGT00390000008371.b #24	ENSGT00390000006784 #25	ENSGT00940000161643	ENSGT00390000011980.b.b #26	ENSGT00950000182888.a.a.a.j.a #27	ENSGT00950000182888.a.a.a.j.b #28	ENSGT00390000009787 #29	ENSGT00940000158829 #30	ENSGT00950000183047.d #31	ENSGT00940000160451 #32	ENSGT00940000154645.B	ENSGT00940000162328	ENSGT00960000189405	ENSGT00940000163010 #33
Theria	ANCESTRAL SPECIES	23	ENSGT00940000161818	ENSGT00940000156902 #7	ENSGT00530000063187.A #8	ENSGT00940000158674 #9	ENSGT00940000160987 #10	ENSGT00390000016537 #11	ENSGT00940000158797 #12	ENSGT00940000154043.A #13	ENSGT00390000006287 #14	ENSGT00390000004067 #15	ENSGT00390000005742 #16	ENSGT00940000155841 #18	ENSGT00390000008565.a #19	ENSGT00390000013112 #20	ENSGT01060000248556.A.a.a.a #21	ENSGT00390000011500 #22	ENSGT00900000141021.b.a #23	ENSGT00390000008371.b #24	ENSGT00390000006784 #25	ENSGT00940000161643	ENSGT00390000011980.b.b #26	ENSGT00950000182888.a.a.a.j.a #27	ENSGT00950000182888.a.a.a.j.b #28	ENSGT00390000009787 #29	ENSGT00940000158829 #30	ENSGT00950000183047.d #31	ENSGT00940000160451 #32	ENSGT00940000154645.B	ENSGT00940000162328	ENSGT00960000189405	ENSGT00940000163010 #33
Eutheria	ANCESTRAL SPECIES	7	ENSGT00940000161818	ENSGT00940000156902 #7	ENSGT00530000063187.A #8	ENSGT00940000158674 #9	ENSGT00940000160987 #10	ENSGT00390000016537 #11	ENSGT00940000158797 #12	ENSGT00940000154043.A #13	ENSGT00390000006287 #14	ENSGT00390000004067 #15	ENSGT00390000005742 #16	ENSGT00940000155841 #18	ENSGT00390000008565.a #19	ENSGT00390000013112 #20	ENSGT01060000248556.A.a.a.a #21	ENSGT00390000011500 #22	ENSGT00900000141021.b.a #23	ENSGT00390000004321	ENSGT00390000008371.b #24	ENSGT00390000006784 #25	ENSGT00940000161643	ENSGT00390000011980.b.b #26	ENSGT00950000182888.a.a.a.j.a #27	ENSGT00950000182888.a.a.a.j.b #28	ENSGT00390000009787 #29	ENSGT00940000158829 #30	ENSGT00950000183047.d #31	ENSGT00940000160451 #32	ENSGT00940000154645.B	ENSGT00940000162328	ENSGT00960000189405
Boreoeutheria	ANCESTRAL SPECIES	10	ENSGT00940000161818	ENSGT00940000156902 #7	ENSGT00530000063187.A #8	ENSGT00940000158674 #9	ENSGT00940000160987 #10	ENSGT00390000016537 #11	ENSGT00940000158797 #12	ENSGT00940000154043.A #13	ENSGT00390000006287 #14	ENSGT00390000004067 #15	ENSGT00390000005742 #16	ENSGT00940000155841 #18	ENSGT00390000008565.a #19	ENSGT00390000013112 #20	ENSGT01060000248556.A.a.a.a #21	ENSGT00390000011500 #22	ENSGT00900000141021.b.a #23	ENSGT00390000004321	ENSGT00390000008371.b #24	ENSGT00390000006784 #25	ENSGT00940000161643	ENSGT00390000011980.b.b #26	ENSGT00950000182888.a.a.a.j.a #27	ENSGT00950000182888.a.a.a.j.b #28	ENSGT00390000009787 #29	ENSGT00940000158829 #30	ENSGT00950000183047.d #31	ENSGT00940000160451 #32	ENSGT00940000154645.B	ENSGT00940000162328	ENSGT00960000189405
Euarchontoglires	ANCESTRAL SPECIES	10	ENSGT00940000161818	ENSGT00940000156902 #7	ENSGT00530000063187.A #8	ENSGT00940000158674 #9	ENSGT00940000160987 #10	ENSGT00390000016537 #11	ENSGT00940000158797 #12	ENSGT00940000154043.A #13	ENSGT00390000006287 #14	ENSGT00390000004067 #15	ENSGT00390000005742 #16	ENSGT00940000155841 #18	ENSGT00390000008565.a #19	ENSGT00390000013112 #20	ENSGT01060000248556.A.a.a.a #21	ENSGT00390000011500 #22	ENSGT00900000141021.b.a #23	ENSGT00390000004321	ENSGT00390000008371.b #24	ENSGT00390000006784 #25	ENSGT00940000161643	ENSGT00390000011980.b.b #26	ENSGT00950000182888.a.a.a.j.a #27	ENSGT00950000182888.a.a.a.j.b #28	ENSGT00390000009787 #29	ENSGT00940000158829 #30	ENSGT00950000183047.d #31	ENSGT00940000160451 #32	ENSGT00940000154645.B	ENSGT00940000162328	ENSGT00390000004524 #34
Euarchontoglires_A	ANCESTRAL SPECIES	10	ENSGT00940000161818	ENSGT00940000156902 #7	ENSGT00530000063187.A #8	ENSGT00940000158674 #9	ENSGT00940000160987 #10	ENSGT00390000016537 #11	ENSGT00940000158797 #12	ENSGT00940000154043.A #13	ENSGT00390000006287 #14	ENSGT00390000004067 #15	ENSGT00390000005742 #16	ENSGT00940000155841 #18	ENSGT00390000008565.a #19	ENSGT00390000013112 #20	ENSGT01060000248556.A.a.a.a #21	ENSGT00390000011500 #22	ENSGT00900000141021.b.a #23	ENSGT00390000004321	ENSGT00390000008371.b #24	ENSGT00390000006784 #25	ENSGT00940000161643	ENSGT00390000011980.b.b #26	ENSGT00950000182888.a.a.a.j.a #27	ENSGT00950000182888.a.a.a.j.b #28	ENSGT00390000009787 #29	ENSGT00940000158829 #30	ENSGT00950000183047.d #31	ENSGT00940000160451 #32	ENSGT00940000154645.B	ENSGT00940000162328	ENSGT00390000004524 #34
Glires	ANCESTRAL SPECIES	9	ENSGT00940000161818	ENSGT00940000156902 #7	ENSGT00530000063187.A #8	ENSGT00940000158674 #9	ENSGT00940000160987 #10	ENSGT00390000016537 #11	ENSGT00940000158797 #12	ENSGT00940000154043.A #13	ENSGT00390000006287 #14	ENSGT00390000004067 #15	ENSGT00390000005742 #16	ENSGT00940000155841 #18	ENSGT00390000008565.a #19	ENSGT00390000013112 #20	ENSGT01060000248556.A.a.a.a #21	ENSGT00390000011500 #22	ENSGT00900000141021.b.a #23	ENSGT00390000004321	ENSGT00390000008371.b #24	ENSGT00390000006784 #25	ENSGT00940000161643	ENSGT00390000011980.b.b #26	ENSGT00950000182888.a.a.a.j.a #27	ENSGT00950000182888.a.a.a.j.b #28	ENSGT00390000009787 #29	ENSGT00940000158829 #30	ENSGT00950000183047.d #31	ENSGT00940000160451 #32	ENSGT00940000154645.B	ENSGT00940000162328	ENSGT00390000004524 #34
Rodentia	ANCESTRAL SPECIES	9	ENSGT00940000161818	ENSGT00940000156902 #7	ENSGT00530000063187.A #8	ENSGT00940000158674 #9	ENSGT00940000160987 #10	ENSGT00390000016537 #11	ENSGT00940000158797 #12	ENSGT00940000154043.A #13	ENSGT00390000006287 #14	ENSGT00390000004067 #15	ENSGT00390000005742 #16	ENSGT00940000155841 #18	ENSGT00390000008565.a #19	ENSGT00390000013112 #20	ENSGT01060000248556.A.a.a.a #21	ENSGT00390000011500 #22	ENSGT00900000141021.b.a #23	ENSGT00390000004321	ENSGT00390000008371.b #24	ENSGT00390000006784 #25	ENSGT00940000161643	ENSGT00390000011980.b.b #26	ENSGT00950000182888.a.a.a.j.a #27	ENSGT00950000182888.a.a.a.j.b #28	ENSGT00390000009787 #29	ENSGT00940000158829 #30	ENSGT00950000183047.d #31	ENSGT00940000160451 #32	ENSGT00940000154645.B	ENSGT00940000162328	ENSGT00390000004524 #34
Rodentia_A	ANCESTRAL SPECIES	11	ENSGT00940000161818	ENSGT00940000156902 #7	ENSGT00530000063187.A #8	ENSGT00940000158674 #9	ENSGT00940000160987 #10	ENSGT00390000016537 #11	ENSGT00940000158797 #12	ENSGT00940000154043.A #13	ENSGT00390000006287 #14	ENSGT00390000004067 #15	ENSGT00390000005742 #16	ENSGT00940000155841 #18	ENSGT00390000008565.a #19	ENSGT00390000013112 #20	ENSGT01060000248556.A.a.a.a #21	ENSGT00390000011500 #22	ENSGT00900000141021.b.a #23	ENSGT00390000004321	ENSGT00390000008371.b #24	ENSGT00390000006784 #25	ENSGT00940000161643	ENSGT00390000011980.b.b #26	ENSGT00950000182888.a.a.a.j.a #27	ENSGT00950000182888.a.a.a.j.b #28	ENSGT00390000009787 #29	ENSGT00940000158829 #30	ENSGT00950000183047.d #31	ENSGT00940000160451 #32	ENSGT00940000154645.B	ENSGT00940000162328	ENSGT00390000004524 #34
Sciuridae	ANCESTRAL SPECIES	6	ENSGT00940000161818	ENSGT00940000156902 #7	ENSGT00530000063187.A #8	ENSGT00940000158674 #9	ENSGT00940000160987 #10	ENSGT00390000016537 #11	ENSGT00940000158797 #12	ENSGT00940000154043.A #13	ENSGT00390000006287 #14	ENSGT00390000004067 #15	ENSGT00390000005742 #16	ENSGT00940000155841 #18	ENSGT00390000008565.a #19	ENSGT00390000013112 #20	ENSGT01060000248556.A.a.a.a #21	ENSGT00390000011500 #22	ENSGT00900000141021.b.a #23	ENSGT00390000008371.b #24	ENSGT00390000006784 #25	ENSGT00940000161643	ENSGT00390000011980.b.b #26	ENSGT00950000182888.a.a.a.j.a #27	ENSGT00950000182888.a.a.a.j.b #28	ENSGT00390000009787 #29	ENSGT00940000158829 #30	ENSGT00950000183047.d #31	ENSGT00940000160451 #32	ENSGT00940000154645.B	ENSGT00940000162328	ENSGT00390000004524 #34	ENSGT00940000156744 #35
Marmotini	ANCESTRAL SPECIES	1	ENSGT00940000161818	ENSGT00940000156902 #7	ENSGT00530000063187.A #8	ENSGT00940000158674 #9	ENSGT00940000160987 #10	ENSGT00390000016537 #11	ENSGT00940000158797 #12	ENSGT00940000154043.A #13	ENSGT00390000006287 #14	ENSGT00390000004067 #15	ENSGT00390000005742 #16	ENSGT00940000155841 #18	ENSGT00390000008565.a #19	ENSGT00390000013112 #20	ENSGT01060000248556.A.a.a.a #21	ENSGT00390000011500 #22	ENSGT00900000141021.b.a #23	ENSGT00390000008371.b #24	ENSGT00390000006784 #25	ENSGT00940000161643	ENSGT00390000011980.b.b #26	ENSGT00950000182888.a.a.a.j.a #27	ENSGT00950000182888.a.a.a.j.b #28	ENSGT00390000009787.c #29	ENSGT00940000158829 #30	ENSGT00950000183047.d #31	ENSGT00940000160451 #32	ENSGT00940000163010 #33	ENSGT00940000154645.B	ENSGT00940000162328	ENSGT00390000004524 #34
Marmotini_b	ANCESTRAL SPECIES	2	ENSGT00940000156902 #7	ENSGT00530000063187.A #8	ENSGT00940000158674 #9	ENSGT00940000160987 #10	ENSGT00390000016537 #11	ENSGT00940000158797 #12	ENSGT00940000154043.A #13	ENSGT00390000006287 #14	ENSGT00390000004067 #15	ENSGT00390000005742 #16	ENSGT00940000155114.bb.b #17	ENSGT00940000155841 #18	ENSGT00390000008565.a #19	ENSGT00390000013112 #20	ENSGT01060000248556.A.a.a.a #21	ENSGT00390000011500 #22	ENSGT00900000141021.b.a #23	ENSGT00390000008371.b #24	ENSGT00390000006784 #25	ENSGT00940000161643	ENSGT00390000011980.b.b #26	ENSGT00950000182888.a.a.a.j.a #27	ENSGT00950000182888.a.a.a.j.b #28	ENSGT00390000009787.c #29	ENSGT00940000158829 #30	ENSGT00950000183047.d #31	ENSGT00940000160451 #32	ENSGT00940000154645.B	ENSGT00940000162328	ENSGT00390000004524 #34	ENSGT00940000156744 #35
Squirrel	MODERN SPECIES	87	ZDHHC12 (ENSSTOG00000010570) #7	ZER1 (ENSSTOG00000009393) #8	TBC1D13 (ENSSTOG00000000112) #9	ENDOG (ENSSTOG00000022690) #10	SPOUT1 (ENSSTOG00000015657) #11	KYAT1 (ENSSTOG00000026320) #12	LRRC8A (ENSSTOG00000002088) #13	PHYHD1 (ENSSTOG00000002098) #14	DOLK (ENSSTOG00000019536) #15	NUP188 (ENSSTOG00000002110) #16	ENSSTOG00000029495 #17	SH3GLB2 (ENSSTOG00000002154) #18	MIGA2 (ENSSTOG00000002167) #19	DOLPP1 (ENSSTOG00000020568) #20	CRAT (ENSSTOG00000001489) #21	PTPA (ENSSTOG00000001500) #22	IER5L (ENSSTOG00000022813) #23	NTMT1 (ENSSTOG00000027423) #24	ASB6 (ENSSTOG00000025302) #25	PTGES (ENSSTOG00000004909) #26	TOR1B (ENSSTOG00000004915) #27	TOR1A (ENSSTOG00000020075) #28	ENSSTOG00000020630 #29	USP20 (ENSSTOG00000005418) #30	FNBP1 (ENSSTOG00000013583) #31	GPR107 (ENSSTOG00000024511) #32	ENSSTOG00000025494 #33	ASS1 (ENSSTOG00000011597) #34	FUBP3 (ENSSTOG00000014105) #35	PRDM12 (ENSSTOG00000005986) #36	EXOSC2 (ENSSTOG00000005999) #37
Arctic ground squirrel	MODERN SPECIES	44	TBC1D13 (ENSUPAG00010017721) #9	ENDOG (ENSUPAG00010017748) #10	SPOUT1 (ENSUPAG00010017751) #11	KYAT1 (ENSUPAG00010017771) #12	LRRC8A (ENSUPAG00010017850) #13	PHYHD1 (ENSUPAG00010017863) #14	DOLK (ENSUPAG00010017872) #15	NUP188 (ENSUPAG00010017876) #16	ENSUPAG00010017952 #17	ENSUPAG00010017953 #17	SH3GLB2 (ENSUPAG00010017959) #18	ENSUPAG00010018058	MIGA2 (ENSUPAG00010018065) #19	DOLPP1 (ENSUPAG00010018078) #20	CRAT (ENSUPAG00010018086) #21	PTPA (ENSUPAG00010018100) #22	IER5L (ENSUPAG00010018173) #23	NTMT1 (ENSUPAG00010018204) #24	ASB6 (ENSUPAG00010018209) #25	PRRX2 (ENSUPAG00010018215)	ENSUPAG00010018223 #26	TOR1B (ENSUPAG00010018227) #27	TOR1A (ENSUPAG00010018233) #28	C9orf78 (ENSUPAG00010018240) #29	USP20 (ENSUPAG00010018244) #30	FNBP1 (ENSUPAG00010018326) #31	GPR107 (ENSUPAG00010019131) #32	NCS1 (ENSUPAG00010019150)	HMCN2 (ENSUPAG00010019173)	ASS1 (ENSUPAG00010019269) #34	FUBP3 (ENSUPAG00010019280) #35
Alpin marmot	MODERN SPECIES	47	ZDHHC12 (ENSMMMG00000013627) #7	ZER1 (ENSMMMG00000013601) #8	TBC1D13 (ENSMMMG00000013588) #9	ENDOG (ENSMMMG00000013572) #10	SPOUT1 (ENSMMMG00000013550) #11	KYAT1 (ENSMMMG00000013394) #12	LRRC8A (ENSMMMG00000013383) #13	PHYHD1 (ENSMMMG00000013375) #14	DOLK (ENSMMMG00000013371) #15	ENSMMMG00000013349 ##17	NUP188 (ENSMMMG00000013287) #16	SH3GLB2 (ENSMMMG00000013101) #18	MIGA2 (ENSMMMG00000013083) #19	DOLPP1 (ENSMMMG00000013055) #20	CRAT (ENSMMMG00000013035) #21	PTPA (ENSMMMG00000013016) #22	NTMT1 (ENSMMMG00000012994) #24	ASB6 (ENSMMMG00000012990) #25	PRRX2 (ENSMMMG00000012985)	ENSMMMG00000012968 #26	TOR1B (ENSMMMG00000012963) #27	TOR1A (ENSMMMG00000012961) #28	C9orf78 (ENSMMMG00000012948) #29	USP20 (ENSMMMG00000012884) #30	FNBP1 (ENSMMMG00000012220) #31	GPR107 (ENSMMMG00000012179) #32	ENSMMMG00000012162 #33	HMCN2 (ENSMMMG00000012024)	ASS1 (ENSMMMG00000012003) #34	FUBP3 (ENSMMMG00000011935) #35	EXOSC2 (ENSMMMG00000011926) #37
Eurasian red squirrel	MODERN SPECIES	6	PKN3 (ENSSVLG00005024092)	ZDHHC12 (ENSSVLG00005024113) #7	ZER1 (ENSSVLG00005024151) #8	TBC1D13 (ENSSVLG00005024185) #9	ENDOG (ENSSVLG00005024228) #10	SPOUT1 (ENSSVLG00005024260) #11	KYAT1 (ENSSVLG00005024316) #12	LRRC8A (ENSSVLG00005024426) #13	PHYHD1 (ENSSVLG00005024460) #14	DOLK (ENSSVLG00005024482) #15	NUP188 (ENSSVLG00005024536) #16	SH3GLB2 (ENSSVLG00005024592) #18	MIGA2 (ENSSVLG00005024675) #19	DOLPP1 (ENSSVLG00005024709) #20	CRAT (ENSSVLG00005024746) #21	PTPA (ENSSVLG00005024810) #22	IER5L (ENSSVLG00005024876) #23	NTMT1 (ENSSVLG00005024942) #24	ASB6 (ENSSVLG00005024994) #25	PRRX2 (ENSSVLG00005025019)	PTGES (ENSSVLG00005025037) #26	TOR1B (ENSSVLG00005025056) #27	TOR1A (ENSSVLG00005025074) #28	C9orf78 (ENSSVLG00005025097) #29	USP20 (ENSSVLG00005025130) #30	FNBP1 (ENSSVLG00005025181) #31	GPR107 (ENSSVLG00005025232) #32	NCS1 (ENSSVLG00005025273)	ENSSVLG00005025309	ASS1 (ENSSVLG00005025352) #34	FUBP3 (ENSSVLG00005025378) #35
Hystricomorpha	ANCESTRAL SPECIES	7	ENSGT00940000161818	ENSGT00940000156902 #7	ENSGT00530000063187.A #8	ENSGT00940000158674 #9	ENSGT00940000160987 #10	ENSGT00390000016537 #11	ENSGT00940000158797 #12	ENSGT00940000154043.A #13	ENSGT00390000006287 #14	ENSGT00390000004067 #15	ENSGT00390000005742 #16	ENSGT00940000155841 #18	ENSGT00390000008565.a #19	ENSGT00390000013112 #20	ENSGT01060000248556.A.a.a.a #21	ENSGT00390000011500 #22	ENSGT00900000141021.b.a #23	ENSGT00390000004321	ENSGT00390000008371.b #24	ENSGT00390000006784 #25	ENSGT00940000161643	ENSGT00390000011980.b.b #26	ENSGT00950000182888.a.a.a.j.a #27	ENSGT00950000182888.a.a.a.j.b #28	ENSGT00390000009787 #29	ENSGT00940000158829 #30	ENSGT00950000183047.d #31	ENSGT00940000160451 #32	ENSGT00940000154645.B	ENSGT00940000162328	ENSGT00390000004524 #34
Hystricomorpha_a	ANCESTRAL SPECIES	5	ENSGT00940000161818	ENSGT00940000156902 #7	ENSGT00530000063187.A #8	ENSGT00940000158674 #9	ENSGT00940000160987 #10	ENSGT00390000016537 #11	ENSGT00940000158797 #12	ENSGT00940000154043.A #13	ENSGT00390000006287 #14	ENSGT00390000004067 #15	ENSGT00390000005742 #16	ENSGT00940000155841 #18	ENSGT00390000008565.a #19	ENSGT00390000013112 #20	ENSGT01060000248556.A.a.a.a #21	ENSGT00390000011500 #22	ENSGT00900000141021.b.a #23	ENSGT00390000008371.b #24	ENSGT00390000006784 #25	ENSGT00940000161643	ENSGT00390000011980.b.b #26	ENSGT00950000182888.a.a.a.j.a #27	ENSGT00950000182888.a.a.a.j.b #28	ENSGT00390000009787 #29	ENSGT00940000158829 #30	ENSGT00950000183047.d #31	ENSGT00940000160451 #32	ENSGT00940000163010 #33	ENSGT00940000154645.B	ENSGT00940000162328	ENSGT00390000004524 #34
Hystricomorpha_b	ANCESTRAL SPECIES	36	ENSGT00940000161818	ENSGT00940000156902 #7	ENSGT00530000063187.A #8	ENSGT00940000158674 #9	ENSGT00940000160987 #10	ENSGT00390000016537 #11	ENSGT00940000158797 #12	ENSGT00940000154043.A #13	ENSGT00390000006287 #14	ENSGT00390000004067 #15	ENSGT00390000005742 #16	ENSGT00940000155841 #18	ENSGT00390000008565.a #19	ENSGT00390000013112 #20	ENSGT01060000248556.A.a.a.a #21	ENSGT00390000011500 #22	ENSGT00900000141021.b.a #23	ENSGT00390000008371.b #24	ENSGT00390000006784 #25	ENSGT00940000161643	ENSGT00390000011980.b.b #26	ENSGT00950000182888.a.a.a.j.a #27	ENSGT00950000182888.a.a.a.j.b #28	ENSGT00390000009787 #29	ENSGT00940000158829 #30	ENSGT00950000183047.d #31	ENSGT00940000160451 #32	ENSGT00940000154645.B	ENSGT00940000162328	ENSGT00390000004524 #34	ENSGT00940000156744 #35
Degu	MODERN SPECIES	164	SET (ENSODEG00000017107)	PKN3 (ENSODEG00000016958)	ZDHHC12 (ENSODEG00000016995) #7	ZER1 (ENSODEG00000017759) #8	TBC1D13 (ENSODEG00000016965) #9	ENDOG (ENSODEG00000017274) #10	KYAT1 (ENSODEG00000016683) #12	LRRC8A (ENSODEG00000017019) #13	PHYHD1 (ENSODEG00000017108) #14	DOLK (ENSODEG00000020510) #15	NUP188 (ENSODEG00000017059) #16	SH3GLB2 (ENSODEG00000016670) #18	MIGA2 (ENSODEG00000016705) #19	ENSODEG00000017020 #20	CRAT (ENSODEG00000016857) #21	ENSODEG00000016771 #22	IER5L (ENSODEG00000016680) #23	NTMT1 (ENSODEG00000016698) #24	ASB6 (ENSODEG00000016637) #25	PRRX2 (ENSODEG00000016961)	PTGES (ENSODEG00000017072) #26	TOR1B (ENSODEG00000016942) #27	TOR1A (ENSODEG00000016914) #28	ENSODEG00000017319 #29	USP20 (ENSODEG00000016809) #30	FNBP1 (ENSODEG00000016898) #31	GPR107 (ENSODEG00000016679) #32	NCS1 (ENSODEG00000016264)	HMCN2 (ENSODEG00000017140)	ENSODEG00000016506 #34	ENSODEG00000016805 #35
Long-tailed chinchilla	MODERN SPECIES	277	PKN3 (ENSCLAG00000003289)	ZDHHC12 (ENSCLAG00000003973) #7	ZER1 (ENSCLAG00000004427) #8	TBC1D13 (ENSCLAG00000005683) #9	ENDOG (ENSCLAG00000006402) #10	SPOUT1 (ENSCLAG00000006487) #11	KYAT1 (ENSCLAG00000001172) #12	LRRC8A (ENSCLAG00000001240) #13	PHYHD1 (ENSCLAG00000001266) #14	DOLK (ENSCLAG00000017527) #15	NUP188 (ENSCLAG00000001480) #16	SH3GLB2 (ENSCLAG00000001218) #18	MIGA2 (ENSCLAG00000001336) #19	DOLPP1 (ENSCLAG00000001378) #20	CRAT (ENSCLAG00000001485) #21	PTPA (ENSCLAG00000001536) #22	IER5L (ENSCLAG00000001614) #23	NTMT1 (ENSCLAG00000002237) #24	ASB6 (ENSCLAG00000002288) #25
Guinea pig	MODERN SPECIES	27	PKN3 (ENSCPOG00000013841)	ZDHHC12 (ENSCPOG00000022707) #7	ZER1 (ENSCPOG00000009341) #8	TBC1D13 (ENSCPOG00000015146) #9	ENDOG (ENSCPOG00000025286) #10	SPOUT1 (ENSCPOG00000004710) #11	KYAT1 (ENSCPOG00000021570) #12	LRRC8A (ENSCPOG00000004076) #13	PHYHD1 (ENSCPOG00000021159) #14	DOLK (ENSCPOG00000004082) #15	NUP188 (ENSCPOG00000004083) #16	SH3GLB2 (ENSCPOG00000004099) #18	MIGA2 (ENSCPOG00000022426) #19	DOLPP1 (ENSCPOG00000030017) #20	CRAT (ENSCPOG00000026132) #21	PTPA (ENSCPOG00000008300) #22	IER5L (ENSCPOG00000039268) #23	NTMT1 (ENSCPOG00000031361) #24	ASB6 (ENSCPOG00000032241) #25	PRRX2 (ENSCPOG00000021821)	PTGES (ENSCPOG00000031288) #26	TOR1B (ENSCPOG00000025420) #27	TOR1A (ENSCPOG00000009275) #28	C9orf78 (ENSCPOG00000009285) #29	USP20 (ENSCPOG00000026238) #30	FNBP1 (ENSCPOG00000001166) #31	GPR107 (ENSCPOG00000006007) #32	ENSCPOG00000030593 #33	HMCN2 (ENSCPOG00000013220)	ASS1 (ENSCPOG00000024091) #34	FUBP3 (ENSCPOG00000010315) #35
Naked mole-rat female	MODERN SPECIES	3	TBC1D13 (ENSHGLG00000012272) #9	ENSHGLG00000012087	ENDOG (ENSHGLG00000011977) #10	SPOUT1 (ENSHGLG00000011378) #11	ENSHGLG00000010822 #12	ENSHGLG00000040009	ENSHGLG00000037099 #12	LRRC8A (ENSHGLG00000014722) #13	PHYHD1 (ENSHGLG00000014417) #14	DOLK (ENSHGLG00000039164) #15	NUP188 (ENSHGLG00000012467) #16	SH3GLB2 (ENSHGLG00000014397) #18	MIGA2 (ENSHGLG00000013304) #19	DOLPP1 (ENSHGLG00000012391) #20	CRAT (ENSHGLG00000013123) #21	PTPA (ENSHGLG00000012591) #22	IER5L (ENSHGLG00000042666) #23	ENSHGLG00000044327	NTMT1 (ENSHGLG00000032402) #24	ASB6 (ENSHGLG00000012158) #25	PRRX2 (ENSHGLG00000032845)	PTGES (ENSHGLG00000047895) #26	TOR1B (ENSHGLG00000037837) #27	TOR1A (ENSHGLG00000012267) #28	ENSHGLG00000042396 #29	USP20 (ENSHGLG00000011412) #30	FNBP1 (ENSHGLG00000011382) #31	GPR107 (ENSHGLG00000018735) #32	NCS1 (ENSHGLG00000014153)	ENSHGLG00000041974	ASS1 (ENSHGLG00000010826) #34
Rodentia_B	ANCESTRAL SPECIES	6	ENSGT00940000161818	ENSGT00940000156902 #7	ENSGT00530000063187.A #8	ENSGT00940000158674 #9	ENSGT00940000160987 #10	ENSGT00390000016537 #11	ENSGT00940000158797 #12	ENSGT00940000154043.A #13	ENSGT00390000006287 #14	ENSGT00390000004067 #15	ENSGT00390000005742 #16	ENSGT00940000155841 #18	ENSGT00390000008565.a #19	ENSGT00390000013112 #20	ENSGT01060000248556.A.a.a.a #21	ENSGT00390000011500 #22	ENSGT00900000141021.b.a #23	ENSGT00390000004321	ENSGT00390000008371.b #24	ENSGT00390000006784 #25	ENSGT00940000161643	ENSGT00390000011980.b.b #26	ENSGT00950000182888.a.a.a.j.a #27	ENSGT00950000182888.a.a.a.j.b #28	ENSGT00390000009787 #29	ENSGT00940000158829 #30	ENSGT00950000183047.d #31	ENSGT00940000160451 #32	ENSGT00940000154645.B	ENSGT00940000162328	ENSGT00390000004524 #34
Myomorpha	ANCESTRAL SPECIES	1	ENSGT00940000161818	ENSGT00940000156902 #7	ENSGT00530000063187.A #8	ENSGT00940000158674 #9	ENSGT00940000160987 #10	ENSGT00390000016537 #11	ENSGT00940000158797 #12	ENSGT00940000154043.A #13	ENSGT00390000006287 #14	ENSGT00390000004067 #15	ENSGT00390000005742 #16	ENSGT00940000155841 #18	ENSGT00390000008565.a #19	ENSGT00390000013112 #20	ENSGT01060000248556.A.a.a.a #21	ENSGT00390000011500 #22	ENSGT00900000141021.b.a #23	ENSGT00390000004321	ENSGT00390000008371.b #24	ENSGT00390000006784 #25	ENSGT00940000161643	ENSGT00390000011980.b.b #26	ENSGT00950000182888.a.a.a.j.a #27	ENSGT00950000182888.a.a.a.j.b #28	ENSGT00390000009787 #29	ENSGT00940000158829 #30	ENSGT00950000183047.d #31	ENSGT00940000160451 #32	ENSGT00940000154645.B	ENSGT00940000162328	ENSGT00390000004524 #34
Muroidea	ANCESTRAL SPECIES	1	ENSGT00940000161818	ENSGT00940000156902 #7	ENSGT00530000063187.A #8	ENSGT00940000158674 #9	ENSGT00940000160987 #10	ENSGT00390000016537 #11	ENSGT00940000158797 #12	ENSGT00940000154043.A #13	ENSGT00390000006287 #14	ENSGT00390000004067 #15	ENSGT00390000005742 #16	ENSGT00940000155841 #18	ENSGT00390000008565.a #19	ENSGT00390000013112 #20	ENSGT01060000248556.A.a.a.a #21	ENSGT00390000011500 #22	ENSGT00900000141021.b.a #23	ENSGT00390000004321	ENSGT00390000008371.b #24	ENSGT00390000006784 #25	ENSGT00940000161643	ENSGT00390000011980.b.b #26	ENSGT00950000182888.a.a.a.j.a #27	ENSGT00950000182888.a.a.a.j.b #28	ENSGT00390000009787 #29	ENSGT00940000158829 #30	ENSGT00950000183047.d #31	ENSGT00940000160451 #32	ENSGT00940000154645.B	ENSGT00940000162328	ENSGT00390000004524 #34
Muroidea_A	ANCESTRAL SPECIES	2	ENSGT00940000161818	ENSGT00940000156902 #7	ENSGT00530000063187.A #8	ENSGT00940000158674 #9	ENSGT00940000160987 #10	ENSGT00390000016537 #11	ENSGT00940000158797 #12	ENSGT00940000154043.A #13	ENSGT00390000006287 #14	ENSGT00390000004067 #15	ENSGT00390000005742 #16	ENSGT00940000155841 #18	ENSGT00390000008565.a #19	ENSGT00390000013112 #20	ENSGT01060000248556.A.a.a.a #21	ENSGT00390000011500 #22	ENSGT00900000141021.b.a #23	ENSGT00390000004321	ENSGT00390000008371.b #24	ENSGT00390000006784 #25	ENSGT00940000161643	ENSGT00390000011980.b.b #26	ENSGT00950000182888.a.a.a.j.a #27	ENSGT00950000182888.a.a.a.j.b #28	ENSGT00390000009787 #29	ENSGT00940000158829 #30	ENSGT00950000183047.d #31	ENSGT00940000160451 #32	ENSGT00940000154645.B	ENSGT00940000162328	ENSGT00390000004524 #34
Cricetidae	ANCESTRAL SPECIES	12	ENSGT00940000161818	ENSGT00940000156902 #7	ENSGT00530000063187.A #8	ENSGT00940000158674 #9	ENSGT00940000160987 #10	ENSGT00390000016537 #11	ENSGT00940000158797 #12	ENSGT00940000154043.A #13	ENSGT00390000006287 #14	ENSGT00390000004067 #15	ENSGT00390000005742 #16	ENSGT00940000155841 #18	ENSGT00390000008565.a #19	ENSGT00390000013112 #20	ENSGT01060000248556.A.a.a.a #21	ENSGT00390000011500 #22	ENSGT00900000141021.b.a #23	ENSGT00390000004321	ENSGT00390000008371.b #24	ENSGT00390000006784 #25	ENSGT00940000161643	ENSGT00390000011980.b.b #26	ENSGT00950000182888.a.a.a.j.a #27	ENSGT00950000182888.a.a.a.j.b #28	ENSGT00390000009787 #29	ENSGT00940000158829 #30	ENSGT00950000183047.d #31	ENSGT00940000160451 #32	ENSGT00940000154645.B	ENSGT00940000162328	ENSGT00390000004524 #34
Cricetinae	ANCESTRAL SPECIES	1	ENSGT00940000161818	ENSGT00940000156902 #7	ENSGT00530000063187.A #8	ENSGT00940000158674 #9	ENSGT00940000160987 #10	ENSGT00390000016537 #11	ENSGT00940000158797 #12	ENSGT00940000154043.A #13	ENSGT00390000006287 #14	ENSGT00390000004067 #15	ENSGT00390000005742 #16	ENSGT00940000155841 #18	ENSGT00390000008565.a #19	ENSGT00390000013112 #20	ENSGT01060000248556.A.a.a.a #21	ENSGT00390000011500 #22	ENSGT00900000141021.b.a #23	ENSGT00390000004321	ENSGT00390000008371.b #24	ENSGT00390000006784 #25	ENSGT00940000161643	ENSGT00390000011980.b.b #26	ENSGT00950000182888.a.a.a.j.a #27	ENSGT00950000182888.a.a.a.j.b #28	ENSGT00390000009787 #29	ENSGT00940000158829 #30	ENSGT00950000183047.d #31	ENSGT00940000160451 #32	ENSGT00940000154645.B	ENSGT00940000162328	ENSGT00390000004524 #34
Golden Hamster	MODERN SPECIES	809	Dync2i2 (ENSMAUG00000020469)	Pkn3 (ENSMAUG00000014746)	Zdhhc12 (ENSMAUG00000020895) #7	ENSMAUG00000012662 #8	Tbc1d13 (ENSMAUG00000017508) #9	Endog (ENSMAUG00000015619) #10	Spout1 (ENSMAUG00000021158) #11	Kyat1 (ENSMAUG00000019437) #12	Lrrc8a (ENSMAUG00000012895) #13	Phyhd1 (ENSMAUG00000018614) #14	Dolk (ENSMAUG00000008066) #15	Nup188 (ENSMAUG00000008082) #16	Sh3glb2 (ENSMAUG00000017931) #18	Miga2 (ENSMAUG00000012688) #19	Dolpp1 (ENSMAUG00000008242) #20	ENSMAUG00000019894 #22	Ier5l (ENSMAUG00000020281) #23	1700001O22Rik (ENSMAUG00000021861)	Ntmt1 (ENSMAUG00000010002) #24	Asb6 (ENSMAUG00000002864) #25	Prrx2 (ENSMAUG00000021405)	Ptges (ENSMAUG00000013314) #26	Tor1b (ENSMAUG00000019063) #27	Tor1a (ENSMAUG00000002165) #28	BC005624 (ENSMAUG00000021586) #29	Usp20 (ENSMAUG00000009267) #30	Fnbp1 (ENSMAUG00000016222) #31	Gpr107 (ENSMAUG00000020250) #32	ENSMAUG00000008220	ENSMAUG00000018907	Hmcn2 (ENSMAUG00000019134)
Chinese hamster chok1gshd	MODERN SPECIES	188	Pkn3 (ENSCGRG00001005515)	Zdhhc12 (ENSCGRG00001013072) #7	Zer1 (ENSCGRG00001011706) #8	Tbc1d13 (ENSCGRG00001002371) #9	Spout1 (ENSCGRG00001022370) #11	Endog (ENSCGRG00001024006) #10	Kyat1 (ENSCGRG00001023967) #12	Lrrc8a (ENSCGRG00001000796) #13	Phyhd1 (ENSCGRG00001022088) #14	Dolk (ENSCGRG00001009570) #15	Nup188 (ENSCGRG00001022209) #16	Sh3glb2 (ENSCGRG00001018391) #18	Miga2 (ENSCGRG00001023379) #19	Dolpp1 (ENSCGRG00001023876) #20	Crat (ENSCGRG00001021049) #21	Ptpa (ENSCGRG00001023315) #22	Ier5l (ENSCGRG00001010079) #23	ENSCGRG00001009423	Ntmt1 (ENSCGRG00001016567) #24	Asb6 (ENSCGRG00001005975) #25	ENSCGRG00001007146	Prrx2 (ENSCGRG00001023907)	Ptges (ENSCGRG00001024200) #26	Tor1b (ENSCGRG00001023992) #27	Tor1a (ENSCGRG00001024352) #28	BC005624 (ENSCGRG00001024600) #29	Usp20 (ENSCGRG00001007813) #30	Fnbp1 (ENSCGRG00001023502) #31	Gpr107 (ENSCGRG00001021890) #32	Ncs1 (ENSCGRG00001023742)	Hmcn2 (ENSCGRG00001013838)
Cricetidae_B	ANCESTRAL SPECIES	7	ENSGT00940000161818	ENSGT00940000156902 #7	ENSGT00530000063187.A #8	ENSGT00940000158674 #9	ENSGT00940000160987 #10	ENSGT00390000016537 #11	ENSGT00940000158797 #12	ENSGT00940000154043.A #13	ENSGT00390000006287 #14	ENSGT00390000004067 #15	ENSGT00390000005742 #16	ENSGT00940000155841 #18	ENSGT00390000008565.a #19	ENSGT00390000013112 #20	ENSGT01060000248556.A.a.a.a #21	ENSGT00390000011500 #22	ENSGT00900000141021.b.a #23	ENSGT00390000004321	ENSGT00390000008371.b #24	ENSGT00390000006784 #25	ENSGT00940000161643	ENSGT00390000011980.b.b #26	ENSGT00950000182888.a.a.a.j.a #27	ENSGT00950000182888.a.a.a.j.b #28	ENSGT00390000009787 #29	ENSGT00940000158829 #30	ENSGT00950000183047.d #31	ENSGT00940000160451 #32	ENSGT00940000154645.B	ENSGT00940000162328	ENSGT00390000004524 #34
Northern American deer mouse	MODERN SPECIES	17	Zdhhc12 (ENSPEMG00000016258) #7	Zer1 (ENSPEMG00000012817) #8	ENSPEMG00000028798	Tbc1d13 (ENSPEMG00000012254) #9	Endog (ENSPEMG00000011395) #10	Spout1 (ENSPEMG00000009348) #11	Kyat1 (ENSPEMG00000010986) #12	Lrrc8a (ENSPEMG00000014647) #13	Phyhd1 (ENSPEMG00000010572) #14	Dolk (ENSPEMG00000007139) #15	Nup188 (ENSPEMG00000010521) #16	Sh3glb2 (ENSPEMG00000018190) #18	Miga2 (ENSPEMG00000012443) #19	Dolpp1 (ENSPEMG00000004526) #20	Crat (ENSPEMG00000015930) #21	Ptpa (ENSPEMG00000004930) #22	Ier5l (ENSPEMG00000026595) #23	1700001O22Rik (ENSPEMG00000008559)	Ntmt1 (ENSPEMG00000016214) #24	Asb6 (ENSPEMG00000018965) #25	ENSPEMG00000008511	Ptges (ENSPEMG00000026928) #26	Tor1b (ENSPEMG00000015643) #27	Tor1a (ENSPEMG00000017473) #28	BC005624 (ENSPEMG00000013405) #29	Usp20 (ENSPEMG00000017617) #30	Fnbp1 (ENSPEMG00000005382) #31	Gpr107 (ENSPEMG00000011641) #32	Ncs1 (ENSPEMG00000009081)	Hmcn2 (ENSPEMG00000011093)	Ass1 (ENSPEMG00000017238) #34
Prairie vole	MODERN SPECIES	12	Pkn3 (ENSMOCG00000021624)	Zdhhc12 (ENSMOCG00000004344) #7	Zer1 (ENSMOCG00000012943) #8	Tbc1d13 (ENSMOCG00000022556) #9	Endog (ENSMOCG00000010842) #10	ENSMOCG00000002315 #11	Kyat1 (ENSMOCG00000021586) #12	Lrrc8a (ENSMOCG00000014593) #13	Phyhd1 (ENSMOCG00000009846) #14	Dolk (ENSMOCG00000002814) #15	Nup188 (ENSMOCG00000010171) #16	Sh3glb2 (ENSMOCG00000004521) #18	Miga2 (ENSMOCG00000019768) #19	Dolpp1 (ENSMOCG00000008747) #20	Crat (ENSMOCG00000004305) #21	Ptpa (ENSMOCG00000019410) #22	Ier5l (ENSMOCG00000017416) #23	1700001O22Rik (ENSMOCG00000012438)	Ntmt1 (ENSMOCG00000010387) #24	Asb6 (ENSMOCG00000020410) #25	Prrx2 (ENSMOCG00000016329)	Ptges (ENSMOCG00000001304) #26	Tor1b (ENSMOCG00000022871) #27	Tor1a (ENSMOCG00000018560) #28	BC005624 (ENSMOCG00000017143) #29	Usp20 (ENSMOCG00000007792) #30	ENSMOCG00000018660	Fnbp1 (ENSMOCG00000015891) #31	Gpr107 (ENSMOCG00000004618) #32	Ncs1 (ENSMOCG00000019199)	Hmcn2 (ENSMOCG00000021220)
Murinae	ANCESTRAL SPECIES	1	ENSGT00940000161818	ENSGT00940000156902 #7	ENSGT00530000063187.A #8	ENSGT00940000158674 #9	ENSGT00940000160987 #10	ENSGT00390000016537 #11	ENSGT00940000158797 #12	ENSGT00940000154043.A #13	ENSGT00390000006287 #14	ENSGT00390000004067 #15	ENSGT00390000005742 #16	ENSGT00940000155841 #18	ENSGT00390000008565.a #19	ENSGT00390000013112 #20	ENSGT01060000248556.A.a.a.a #21	ENSGT00390000011500 #22	ENSGT00900000141021.b.a #23	ENSGT00390000004321	ENSGT00390000008371.b #24	ENSGT00390000006784 #25	ENSGT00940000161643	ENSGT00390000011980.b.b #26	ENSGT00950000182888.a.a.a.j.a #27	ENSGT00950000182888.a.a.a.j.b #28	ENSGT00390000009787 #29	ENSGT00940000158829 #30	ENSGT00950000183047.d #31	ENSGT00940000160451 #32	ENSGT00940000154645.B	ENSGT00940000162328	ENSGT00390000004524 #34
Mus	ANCESTRAL SPECIES	1	ENSGT00940000156902 #7	ENSGT00530000063187.A #8	ENSGT00940000158674 #9	ENSGT00940000160987 #10	ENSGT00390000016537 #11	ENSGT00940000158797 #12	ENSGT00940000154043.A #13	ENSGT00390000006287 #14	ENSGT01070000256473	ENSGT00390000004067 #15	ENSGT00390000005742 #16	ENSGT00940000155841 #18	ENSGT00390000008565.a #19	ENSGT00390000013112 #20	ENSGT01060000248556.A.a.a.a #21	ENSGT00390000011500 #22	ENSGT00900000141021.b.a #23	ENSGT00860000135997	ENSGT00390000004321	ENSGT00390000008371.b #24	ENSGT00390000006784 #25	ENSGT00940000161643	ENSGT00390000011980.b.b #26	ENSGT00950000182888.a.a.a.j.a #27	ENSGT00950000182888.a.a.a.j.b #28	ENSGT00390000009787 #29	ENSGT00940000158829 #30	ENSGT00950000183047.d #31	ENSGT00940000160451 #32	ENSGT00940000154645.B	ENSGT00940000162328
Mus_A	ANCESTRAL SPECIES		ENSGT00940000156902 #7	ENSGT00530000063187.A #8	ENSGT00940000158674 #9	ENSGT00940000160987 #10	ENSGT00390000016537 #11	ENSGT00940000158797 #12	ENSGT00940000154043.A.c.b #13	ENSGT00390000006287 #14	ENSGT01070000256473	ENSGT00390000004067 #15	ENSGT00390000005742 #16	ENSGT00940000155841 #18	ENSGT00390000008565.a #19	ENSGT00390000013112 #20	ENSGT01060000248556.A.a.a.a #21	ENSGT00390000011500 #22	ENSGT00900000141021.b.a #23	ENSGT00860000135997	ENSGT00390000004321	ENSGT00390000008371.b #24	ENSGT00390000006784 #25	ENSGT00940000161643	ENSGT00390000011980.b.b #26	ENSGT00950000182888.a.a.a.j.a #27	ENSGT00950000182888.a.a.a.j.b #28	ENSGT00390000009787 #29	ENSGT00940000158829 #30	ENSGT00950000183047.d #31	ENSGT00940000160451 #32	ENSGT00940000154645.B	ENSGT00940000162328
Ryukyu mouse	MODERN SPECIES	11	Zer1 (MGP_CAROLIEiJ_G0023381) #8	Tbc1d13 (MGP_CAROLIEiJ_G0023382) #9	Endog (MGP_CAROLIEiJ_G0023383) #10	Spout1 (MGP_CAROLIEiJ_G0023384) #11	Kyat1 (MGP_CAROLIEiJ_G0023385) #12	MGP_CAROLIEiJ_G0023386 #13	Lrrc8a (MGP_CAROLIEiJ_G0023387) #13	Phyhd1 (MGP_CAROLIEiJ_G0023388) #14	MGP_CAROLIEiJ_G0023389	Dolk (MGP_CAROLIEiJ_G0023390) #15	MGP_CAROLIEiJ_G0023391 #16	Sh3glb2 (MGP_CAROLIEiJ_G0023392) #18	Miga2 (MGP_CAROLIEiJ_G0023393) #19	Dolpp1 (MGP_CAROLIEiJ_G0023394) #20	Crat (MGP_CAROLIEiJ_G0023395) #21	Ptpa (MGP_CAROLIEiJ_G0023396) #22	Ier5l (MGP_CAROLIEiJ_G0023397) #23	Cstad (MGP_CAROLIEiJ_G0023398)	1700001O22Rik (MGP_CAROLIEiJ_G0023399)	Ntmt1 (MGP_CAROLIEiJ_G0023400) #24	Asb6 (MGP_CAROLIEiJ_G0023401) #25	Prrx2 (MGP_CAROLIEiJ_G0023402)	Ptges (MGP_CAROLIEiJ_G0023403) #26	Tor1b (MGP_CAROLIEiJ_G0023404) #27	Tor1a (MGP_CAROLIEiJ_G0023405) #28	BC005624 (MGP_CAROLIEiJ_G0023406) #29	Usp20 (MGP_CAROLIEiJ_G0023407) #30	Fnbp1 (MGP_CAROLIEiJ_G0023408) #31	Gpr107 (MGP_CAROLIEiJ_G0023409) #32	Ncs1 (MGP_CAROLIEiJ_G0023410)	Hmcn2 (MGP_CAROLIEiJ_G0023411)
Mus_B	ANCESTRAL SPECIES	1	ENSGT00940000161818	ENSGT00940000156902 #7	ENSGT00530000063187.A #8	ENSGT00940000158674 #9	ENSGT00940000160987 #10	ENSGT00390000016537 #11	ENSGT00940000158797 #12	ENSGT00940000154043.A.c.b #13	ENSGT00390000006287 #14	ENSGT00390000004067 #15	ENSGT00390000005742 #16	ENSGT00940000155841 #18	ENSGT00390000008565.a #19	ENSGT00390000013112 #20	ENSGT01060000248556.A.a.a.a #21	ENSGT00390000011500 #22	ENSGT00900000141021.b.a #23	ENSGT00860000135997	ENSGT00390000004321	ENSGT00390000008371.b #24	ENSGT00390000006784 #25	ENSGT00940000161643	ENSGT00390000011980.b.b #26	ENSGT00950000182888.a.a.a.j.a #27	ENSGT00950000182888.a.a.a.j.b #28	ENSGT00390000009787 #29	ENSGT00940000158829 #30	ENSGT00950000183047.d #31	ENSGT00940000160451 #32	ENSGT00940000154645.B	ENSGT00940000162328
Mouse	MODERN SPECIES	11	Pkn3 (ENSMUSG00000026785)	Zdhhc12 (ENSMUSG00000015335) #7	Zer1 (ENSMUSG00000039686) #8	Tbc1d13 (ENSMUSG00000039678) #9	Endog (ENSMUSG00000015337) #10	Spout1 (ENSMUSG00000039660) #11	Kyat1 (ENSMUSG00000039648) #12	Lrrc8a (ENSMUSG00000007476) #13	Phyhd1 (ENSMUSG00000079484) #14	Dolk (ENSMUSG00000075419) #15	Nup188 (ENSMUSG00000052533) #16	Sh3glb2 (ENSMUSG00000026860) #18	Miga2 (ENSMUSG00000026858) #19	Dolpp1 (ENSMUSG00000026856) #20	Crat (ENSMUSG00000026853) #21	Ptpa (ENSMUSG00000039515) #22	Ier5l (ENSMUSG00000089762) #23	Cstad (ENSMUSG00000047363)	1700001O22Rik (ENSMUSG00000044320)	Ntmt1 (ENSMUSG00000026857) #24	Asb6 (ENSMUSG00000039483) #25	Prrx2 (ENSMUSG00000039476)	Ptges (ENSMUSG00000050737) #26	Tor1b (ENSMUSG00000026848) #27	Tor1a (ENSMUSG00000026849) #28	BC005624 (ENSMUSG00000026851) #29	Usp20 (ENSMUSG00000026854) #30	Fnbp1 (ENSMUSG00000075415) #31	Gpr107 (ENSMUSG00000000194) #32	Ncs1 (ENSMUSG00000062661)	Hmcn2 (ENSMUSG00000055632)
Mus_C	ANCESTRAL SPECIES		ENSGT00940000161818	ENSGT00940000156902 #7	ENSGT00530000063187.A #8	ENSGT00940000158674 #9	ENSGT00940000160987 #10	ENSGT00390000016537 #11	ENSGT00940000158797 #12	ENSGT00940000154043.A.c.b #13	ENSGT00390000006287 #14	ENSGT00390000004067 #15	ENSGT00390000005742 #16	ENSGT00940000155841 #18	ENSGT00390000008565.a #19	ENSGT00390000013112 #20	ENSGT01060000248556.A.a.a.a #21	ENSGT00390000011500 #22	ENSGT00900000141021.b.a #23	ENSGT00860000135997	ENSGT00390000004321	ENSGT00390000008371.b #24	ENSGT00390000006784 #25	ENSGT00940000161643	ENSGT00390000011980.b.b #26	ENSGT00950000182888.a.a.a.j.a #27	ENSGT00950000182888.a.a.a.j.b #28	ENSGT00390000009787 #29	ENSGT00940000158829 #30	ENSGT00950000183047.d #31	ENSGT00940000160451 #32	ENSGT00940000154645.B	ENSGT00940000162328
Steppe mouse	MODERN SPECIES	2298																Ptpa (ENSMSIG00000018627) #22	Cstad (ENSMSIG00000018614)
spretus	MODERN SPECIES	11	Zer1 (MGP_SPRETEiJ_G0024298) #8	Tbc1d13 (MGP_SPRETEiJ_G0024299) #9	Endog (MGP_SPRETEiJ_G0024300) #10	Spout1 (MGP_SPRETEiJ_G0024301) #11	Kyat1 (MGP_SPRETEiJ_G0024302) #12	Lrrc8a (MGP_SPRETEiJ_G0024303) #13	MGP_SPRETEiJ_G0024304 #13	Phyhd1 (MGP_SPRETEiJ_G0024305) #14	MGP_SPRETEiJ_G0024306 #16	Dolk (MGP_SPRETEiJ_G0024307) #15	Nup188 (MGP_SPRETEiJ_G0024308) #16	Sh3glb2 (MGP_SPRETEiJ_G0024309) #18	Miga2 (MGP_SPRETEiJ_G0024310) #19	Dolpp1 (MGP_SPRETEiJ_G0024311) #20	Crat (MGP_SPRETEiJ_G0024312) #21	Ptpa (MGP_SPRETEiJ_G0024313) #22	Ier5l (MGP_SPRETEiJ_G0024314) #23	Cstad (MGP_SPRETEiJ_G0024315)	1700001O22Rik (MGP_SPRETEiJ_G0024316)	Ntmt1 (MGP_SPRETEiJ_G0024317) #24	Asb6 (MGP_SPRETEiJ_G0024318) #25	Prrx2 (MGP_SPRETEiJ_G0024319)	Ptges (MGP_SPRETEiJ_G0024320) #26	Tor1a (MGP_SPRETEiJ_G0024321) #28	Tor1b (MGP_SPRETEiJ_G0024322) #27	BC005624 (MGP_SPRETEiJ_G0024323) #29	Usp20 (MGP_SPRETEiJ_G0024324) #30	Fnbp1 (MGP_SPRETEiJ_G0024325) #31	Gpr107 (MGP_SPRETEiJ_G0024326) #32	MGP_SPRETEiJ_G0024327	Hmcn2 (MGP_SPRETEiJ_G0024328)
Shrew mouse	MODERN SPECIES	16	Zer1 (MGP_PahariEiJ_G0024838) #8	Tbc1d13 (MGP_PahariEiJ_G0024839) #9	Endog (MGP_PahariEiJ_G0024840) #10	Spout1 (MGP_PahariEiJ_G0024841) #11	Kyat1 (MGP_PahariEiJ_G0024842) #12	MGP_PahariEiJ_G0024843 #13	MGP_PahariEiJ_G0024844 #13	Phyhd1 (MGP_PahariEiJ_G0024845) #14	MGP_PahariEiJ_G0024846	Dolk (MGP_PahariEiJ_G0024847) #15	Nup188 (MGP_PahariEiJ_G0024848) #16	Sh3glb2 (MGP_PahariEiJ_G0024849) #18	Miga2 (MGP_PahariEiJ_G0024850) #19	Dolpp1 (MGP_PahariEiJ_G0024851) #20	Crat (MGP_PahariEiJ_G0024852) #21	Ptpa (MGP_PahariEiJ_G0024853) #22	Ier5l (MGP_PahariEiJ_G0024854) #23	MGP_PahariEiJ_G0024855	1700001O22Rik (MGP_PahariEiJ_G0024856)	Ntmt1 (MGP_PahariEiJ_G0024857) #24	Asb6 (MGP_PahariEiJ_G0024858) #25	MGP_PahariEiJ_G0024859	Ptges (MGP_PahariEiJ_G0024860) #26	Tor1b (MGP_PahariEiJ_G0024861) #27	Tor1a (MGP_PahariEiJ_G0024862) #28	BC005624 (MGP_PahariEiJ_G0024863) #29	Usp20 (MGP_PahariEiJ_G0024864) #30	Fnbp1 (MGP_PahariEiJ_G0024865) #31	Gpr107 (MGP_PahariEiJ_G0024866) #32	Ncs1 (MGP_PahariEiJ_G0024867)	MGP_PahariEiJ_G0024868
Rat	MODERN SPECIES	13	Zdhhc12 (ENSRNOG00000015791) #7	Zer1 (ENSRNOG00000025832) #8	Tbc1d13 (ENSRNOG00000015970) #9	ENSRNOG00000067313	Endog (ENSRNOG00000016033) #10	Spout1 (ENSRNOG00000025711) #11	Kyat1 (ENSRNOG00000016097) #12	Lrrc8a (ENSRNOG00000025296) #13	Phyhd1 (ENSRNOG00000016794) #14	Dolk (ENSRNOG00000016989) #15	Nup188 (ENSRNOG00000025185) #16	Sh3glb2 (ENSRNOG00000017295) #18	Miga2 (ENSRNOG00000017513) #19	Dolpp1 (ENSRNOG00000017663) #20	Crat (ENSRNOG00000018145) #21	Ptpa (ENSRNOG00000018457) #22	Ier5l (ENSRNOG00000024846) #23	LOC100361008 (ENSRNOG00000022490)	C3h9orf50 (ENSRNOG00000018486)	Ntmt1 (ENSRNOG00000024809) #24	Prrx2 (ENSRNOG00000058329)	Asb6 (ENSRNOG00000024786) #25	Tor1b (ENSRNOG00000006435) #27	Tor1a (ENSRNOG00000006894) #28	C3h9orf78 (ENSRNOG00000007532) #29	Usp20 (ENSRNOG00000007710) #30	Fnbp1 (ENSRNOG00000008258) #31	Gpr107 (ENSRNOG00000023589) #32	Ncs1 (ENSRNOG00000064701) #33	LOC103691761 (ENSRNOG00000062268)	Hmcn2 (ENSRNOG00000064166)
Upper Galilee mountains blind mole rat	MODERN SPECIES	513								Lrrc8a (ENSNGAG00000011643) #13	Phyhd1 (ENSNGAG00000010437) #14	Dolk (ENSNGAG00000017040) #15	Nup188 (ENSNGAG00000011416) #16	Sh3glb2 (ENSNGAG00000012596) #18	Miga2 (ENSNGAG00000000403) #19	Dolpp1 (ENSNGAG00000010714) #20	Crat (ENSNGAG00000010316) #21	Ptpa (ENSNGAG00000007141) #22	Ier5l (ENSNGAG00000016964) #23	Ntmt1 (ENSNGAG00000020520) #24	Asb6 (ENSNGAG00000018657) #25	Prrx2 (ENSNGAG00000015873)	Ptges (ENSNGAG00000011958) #26	Tor1b (ENSNGAG00000014937) #27	Tor1a (ENSNGAG00000008009) #28	BC005624 (ENSNGAG00000004959) #29	ENSNGAG00000007690 #30	Fnbp1 (ENSNGAG00000012937) #31	Gpr107 (ENSNGAG00000011379) #32	Ncs1 (ENSNGAG00000014453)	Hmcn2 (ENSNGAG00000000330)	Ass1 (ENSNGAG00000001086) #34	Fubp3 (ENSNGAG00000016562) #35
Lesser Egyptian jerboa	MODERN SPECIES	216								Lrrc8a (ENSJJAG00000000198) #13	Phyhd1 (ENSJJAG00000023245) #14	Dolk (ENSJJAG00000012440) #15	Nup188 (ENSJJAG00000014303) #16	Sh3glb2 (ENSJJAG00000004845) #18	Miga2 (ENSJJAG00000005734) #19	Dolpp1 (ENSJJAG00000023436) #20	Crat (ENSJJAG00000021624) #21	Ptpa (ENSJJAG00000019117) #22	Ier5l (ENSJJAG00000018437) #23	Ntmt1 (ENSJJAG00000018216) #24	Asb6 (ENSJJAG00000005860) #25	Prrx2 (ENSJJAG00000001173)	Ptges (ENSJJAG00000022123) #26	Tor1b (ENSJJAG00000021809) #27	Tor1a (ENSJJAG00000020493) #28	BC005624 (ENSJJAG00000019276) #29	ENSJJAG00000018480 #30	Fnbp1 (ENSJJAG00000014760) #31	Gpr107 (ENSJJAG00000011368) #32	ENSJJAG00000006586 #33	Hmcn2 (ENSJJAG00000015957)	Ass1 (ENSJJAG00000012217) #34	ENSJJAG00000011740
Kangaroo rat	MODERN SPECIES	374	Pkn3 (ENSDORG00000013496)	Zdhhc12 (ENSDORG00000013500) #7	Zer1 (ENSDORG00000013504) #8	Tbc1d13 (ENSDORG00000027055) #9	Endog (ENSDORG00000028893) #10	Spout1 (ENSDORG00000008670) #11	Kyat1 (ENSDORG00000008671) #12	Lrrc8a (ENSDORG00000008674) #13	Phyhd1 (ENSDORG00000016016) #14	Dolk (ENSDORG00000016017) #15	Nup188 (ENSDORG00000010867) #16	Sh3glb2 (ENSDORG00000010868) #18	Miga2 (ENSDORG00000006836) #19	Dolpp1 (ENSDORG00000006838) #20	Crat (ENSDORG00000006841) #21	Ptpa (ENSDORG00000006842) #22	Ntmt1 (ENSDORG00000014314) #24	Asb6 (ENSDORG00000014313) #25	Prrx2 (ENSDORG00000003232)	Ptges (ENSDORG00000003233) #26	Tor1b (ENSDORG00000000778) #27	Tor1a (ENSDORG00000000780) #28	BC005624 (ENSDORG00000000781) #29	Usp20 (ENSDORG00000000782) #30	Fnbp1 (ENSDORG00000000783) #31	Gpr107 (ENSDORG00000006286) #32	ENSDORG00000013807 #33	Hmcn2 (ENSDORG00000027158)	Ass1 (ENSDORG00000010865) #34	ENSDORG00000030247 #35	ENSDORG00000027073
Lagomorpha	ANCESTRAL SPECIES	194	ENSGT00940000161818	ENSGT00940000156902 #7	ENSGT00530000063187.A #8	ENSGT00940000158674 #9	ENSGT00940000160987 #10	ENSGT00390000016537 #11	ENSGT00940000158797 #12	ENSGT00940000154043.A #13	ENSGT00390000006287 #14	ENSGT00390000004067 #15	ENSGT00390000005742 #16	ENSGT00940000155841 #18	ENSGT00390000008565.a #19	ENSGT00390000013112 #20	ENSGT01060000248556.A.a.a.a #21	ENSGT00390000011500 #22
Pika	MODERN SPECIES	583																PTPA (ENSOPRG00000004342) #22
Rabbit	MODERN SPECIES	855									PHYHD1 (ENSOCUG00000004894) #14	DOLK (ENSOCUG00000000321) #15	NUP188 (ENSOCUG00000000323) #16	SH3GLB2 (ENSOCUG00000000328) #18	MIGA2 (ENSOCUG00000012585) #19	DOLPP1 (ENSOCUG00000027372) #20	ENSOCUG00000030451 #21	ENSOCUG00000003042 #22
Tree shrew	MODERN SPECIES	5863											NUP188 (ENSTBEG00000009957) #16	SH3GLB2 (ENSTBEG00000010602) #18	MIGA2 (ENSTBEG00000011279) #19	DOLPP1 (ENSTBEG00000011404) #20	ENSTBEG00000011574 #21	PTPA (ENSTBEG00000011685) #22
Primates	ANCESTRAL SPECIES	9	ENSGT00940000161818	ENSGT00940000156902 #7	ENSGT00530000063187.A #8	ENSGT00940000158674 #9	ENSGT00940000160987 #10	ENSGT00390000016537 #11	ENSGT00940000158797 #12	ENSGT00940000154043.A #13	ENSGT00390000006287 #14	ENSGT00390000004067 #15	ENSGT00390000005742 #16	ENSGT00940000155841 #18	ENSGT00390000008565.a #19	ENSGT00390000013112 #20	ENSGT01060000248556.A.a.a.a #21	ENSGT00390000011500 #22	ENSGT00900000141021.b.a #23	ENSGT00390000004321	ENSGT00390000008371.b #24	ENSGT00390000006784 #25	ENSGT00940000161643	ENSGT00390000011980.b.b #26	ENSGT00950000182888.a.a.a.j.a #27	ENSGT00950000182888.a.a.a.j.b #28	ENSGT00390000009787 #29	ENSGT00940000158829 #30	ENSGT00950000183047.d #31	ENSGT00940000160451 #32	ENSGT00940000154645.B	ENSGT00940000162328	ENSGT00940000165095
Haplorrhini	ANCESTRAL SPECIES	9	ENSGT00940000161818	ENSGT00940000156902 #7	ENSGT00530000063187.A #8	ENSGT00940000158674 #9	ENSGT00940000160987 #10	ENSGT00390000016537 #11	ENSGT00940000158797 #12	ENSGT00940000154043.A #13	ENSGT00390000006287 #14	ENSGT00390000004067 #15	ENSGT00390000005742 #16	ENSGT00940000155841 #18	ENSGT00390000008565.a #19	ENSGT00390000013112 #20	ENSGT01060000248556.A.a.a.a #21	ENSGT00390000011500 #22	ENSGT00900000141021.b.a #23	ENSGT00390000004321	ENSGT00390000008371.b #24	ENSGT00390000006784 #25	ENSGT00940000161643	ENSGT00390000011980.b.b #26	ENSGT00950000182888.a.a.a.j.a #27	ENSGT00950000182888.a.a.a.j.b #28	ENSGT00390000009787 #29	ENSGT00940000158829 #30	ENSGT00950000183047.d #31	ENSGT00940000160451 #32	ENSGT00940000154645.B	ENSGT00940000163010 #33	ENSGT00940000162328
Simiiformes	ANCESTRAL SPECIES	11	ENSGT00940000161818	ENSGT00940000156902 #7	ENSGT00530000063187.A #8	ENSGT00940000158674 #9	ENSGT00940000160987 #10	ENSGT00390000016537 #11	ENSGT00940000158797 #12	ENSGT00940000154043.A #13	ENSGT00390000006287 #14	ENSGT00390000004067 #15	ENSGT00390000005742 #16	ENSGT00940000155841 #18	ENSGT00390000008565.a #19	ENSGT00390000013112 #20	ENSGT01060000248556.A.a.a.a #21	ENSGT00390000011500 #22	ENSGT00900000141021.b.a #23	ENSGT00390000004321	ENSGT00390000008371.b #24	ENSGT00390000006784 #25	ENSGT00940000161643	ENSGT00390000011980.b.b #26	ENSGT00950000182888.a.a.a.j.a #27	ENSGT00950000182888.a.a.a.j.b #28	ENSGT00390000009787 #29	ENSGT00940000158829 #30	ENSGT00950000183047.d #31	ENSGT00940000160451 #32	ENSGT00940000163010 #33	ENSGT00910000146910	ENSGT00940000154645.B
Catarrhini	ANCESTRAL SPECIES	13	ENSGT00940000156902 #7	ENSGT00530000063187.A #8	ENSGT00940000158674 #9	ENSGT00940000160987 #10	ENSGT00390000016537 #11	ENSGT00940000158797 #12	ENSGT00940000154043.A #13	ENSGT00390000006287 #14	ENSGT00390000004067 #15	ENSGT00390000005742 #16	ENSGT00910000147377	ENSGT00940000155841 #18	ENSGT00390000008565.a #19	ENSGT00390000013112 #20	ENSGT01060000248556.A.a.a.a #21	ENSGT00390000011500 #22	ENSGT00900000141021.b.a #23	ENSGT00390000004321	ENSGT00390000008371.b #24	ENSGT00390000006784 #25	ENSGT00940000161643	ENSGT00910000147997	ENSGT00390000011980.b.b #26	ENSGT00950000182888.a.a.a.j.a #27	ENSGT00950000182888.a.a.a.j.b #28	ENSGT00390000009787 #29	ENSGT00940000158829 #30	ENSGT00950000183047.d #31	ENSGT00940000160451 #32	ENSGT00940000163010 #33	ENSGT00910000146910
Cercopithecidae	ANCESTRAL SPECIES	9	ENSGT00940000156902 #7	ENSGT00530000063187.A #8	ENSGT00940000158674 #9	ENSGT00940000160987 #10	ENSGT00390000016537 #11	ENSGT00940000158797 #12	ENSGT00940000154043.A #13	ENSGT00390000006287 #14	ENSGT00390000004067 #15	ENSGT00390000005742 #16	ENSGT00910000147377	ENSGT00940000155841 #18	ENSGT00390000008565.a #19	ENSGT00390000013112 #20	ENSGT01060000248556.A.a.a.a #21	ENSGT00390000011500 #22	ENSGT00900000141021.b.a #23	ENSGT00390000004321	ENSGT00390000008371.b #24	ENSGT00390000006784 #25	ENSGT00940000161643	ENSGT00910000147997	ENSGT00390000011980.b.b #26	ENSGT00950000182888.a.a.a.j.a #27	ENSGT00950000182888.a.a.a.j.b #28	ENSGT00390000009787 #29	ENSGT00940000158829 #30	ENSGT00950000183047.d #31	ENSGT00940000160451 #32	ENSGT00940000154645.B	ENSGT00910000146910
Cercopithecinae	ANCESTRAL SPECIES	12	ENSGT00940000156902 #7	ENSGT00530000063187.A #8	ENSGT00940000158674 #9	ENSGT00940000160987 #10	ENSGT00390000016537 #11	ENSGT00940000158797 #12	ENSGT00940000154043.A #13	ENSGT00390000006287 #14	ENSGT00390000004067 #15	ENSGT00390000005742 #16	ENSGT00910000147377	ENSGT00940000155841 #18	ENSGT00390000008565.a #19	ENSGT00390000013112 #20	ENSGT01060000248556.A.a.a.a #21	ENSGT00390000011500 #22	ENSGT00900000141021.b.a #23	ENSGT00390000004321	ENSGT00390000008371.b #24	ENSGT00390000006784 #25	ENSGT00940000161643	ENSGT00910000147997	ENSGT00390000011980.b.b #26	ENSGT00950000182888.a.a.a.j.a #27	ENSGT00950000182888.a.a.a.j.b #28	ENSGT00390000009787 #29	ENSGT00940000158829 #30	ENSGT00950000183047.d #31	ENSGT00940000160451 #32	ENSGT00940000154645.B	ENSGT00910000146910
Cercopithecinae_a	ANCESTRAL SPECIES	12	ENSGT00940000156902 #7	ENSGT00530000063187.A #8	ENSGT00940000158674 #9	ENSGT00940000160987 #10	ENSGT00390000016537 #11	ENSGT00940000158797 #12	ENSGT00940000154043.A #13	ENSGT00390000006287 #14	ENSGT00390000004067 #15	ENSGT00390000005742 #16	ENSGT00910000147377	ENSGT00940000155841 #18	ENSGT00390000008565.a #19	ENSGT00390000013112 #20	ENSGT01060000248556.A.a.a.a #21	ENSGT00390000011500 #22	ENSGT00910000147529	ENSGT00900000141021.b.a #23	ENSGT00390000004321	ENSGT00390000008371.b #24	ENSGT00390000006784 #25	ENSGT00940000161643	ENSGT00910000147997	ENSGT00390000011980.b.b #26	ENSGT00950000182888.a.a.a.j.a #27	ENSGT00950000182888.a.a.a.j.b #28	ENSGT00390000009787 #29	ENSGT00940000158829 #30	ENSGT00950000183047.d #31	ENSGT00940000160451 #32	ENSGT00940000154645.B
Cercopithecinae_b	ANCESTRAL SPECIES	7	ENSGT00940000156902 #7	ENSGT00530000063187.A #8	ENSGT00940000158674 #9	ENSGT00940000160987 #10	ENSGT00390000016537 #11	ENSGT00940000158797 #12	ENSGT00940000154043.A #13	ENSGT00390000006287 #14	ENSGT00390000004067 #15	ENSGT00390000005742 #16	ENSGT00910000147377	ENSGT00940000155841 #18	ENSGT00390000008565.a #19	ENSGT00390000013112 #20	ENSGT01060000248556.A.a.a.a #21	ENSGT00390000011500 #22	ENSGT00910000147529	ENSGT00900000141021.b.a #23	ENSGT00390000004321	ENSGT00390000008371.b #24	ENSGT00390000006784 #25	ENSGT00940000161643	ENSGT00910000147997	ENSGT00390000011980.b.b #26	ENSGT00950000182888.a.a.a.j.a #27	ENSGT00950000182888.a.a.a.j.b #28	ENSGT00390000009787 #29	ENSGT00940000158829 #30	ENSGT00950000183047.d #31	ENSGT00940000160451 #32	ENSGT00910000146910
Olive baboon	MODERN SPECIES	4	ZDHHC12 (ENSPANG00000035442) #7	ZER1 (ENSPANG00000025924) #8	TBC1D13 (ENSPANG00000025925) #9	ENDOG (ENSPANG00000025933) #10	SPOUT1 (ENSPANG00000025932) #11	KYAT1 (ENSPANG00000025931) #12	ENSPANG00000037244	LRRC8A (ENSPANG00000025930) #13	DOLK (ENSPANG00000003223) #15	PHYHD1 (ENSPANG00000025929) #14	NUP188 (ENSPANG00000025928) #16	SH3GLB2 (ENSPANG00000025927) #18	MIGA2 (ENSPANG00000025926) #19	DOLPP1 (ENSPANG00000025954) #20	CRAT (ENSPANG00000025955) #21	PTPA (ENSPANG00000025963) #22	IER5L (ENSPANG00000042720) #23	C9orf50 (ENSPANG00000025961)	NTMT1 (ENSPANG00000025960) #24	ASB6 (ENSPANG00000025959) #25	PRRX2 (ENSPANG00000025958)	PTGES (ENSPANG00000032931) #26	TOR1B (ENSPANG00000025956) #27	TOR1A (ENSPANG00000025977) #28	C9orf78 (ENSPANG00000025976) #29	USP20 (ENSPANG00000025975) #30	FNBP1 (ENSPANG00000025974) #31	GPR107 (ENSPANG00000025973) #32	ENSPANG00000033050 #33	HMCN2 (ENSPANG00000025970)	ENSPANG00000025969 #34
Cercopithecinae_d	ANCESTRAL SPECIES	56	ENSGT00940000156902 #7	ENSGT00530000063187.A #8	ENSGT00940000158674 #9	ENSGT00940000160987 #10	ENSGT00390000016537 #11	ENSGT00940000158797 #12	ENSGT00940000154043.A #13	ENSGT00390000006287 #14	ENSGT00390000004067 #15	ENSGT00390000005742 #16	ENSGT00910000147377	ENSGT00940000155841 #18	ENSGT00390000008565.a #19	ENSGT00390000013112 #20	ENSGT01060000248556.A.a.a.a #21	ENSGT00390000011500 #22	ENSGT00910000147529	ENSGT00900000141021.b.a #23	ENSGT00390000004321	ENSGT00390000008371.b #24	ENSGT00390000006784 #25	ENSGT00940000161643	ENSGT00910000147997	ENSGT00390000011980.b.b #26	ENSGT00950000182888.a.a.a.j.a #27	ENSGT00950000182888.a.a.a.j.b #28	ENSGT00390000009787 #29	ENSGT00940000158829 #30	ENSGT00950000183047.d #31	ENSGT00940000160451 #32	ENSGT00910000146910
Sooty mangabey	MODERN SPECIES	489	ZER1 (ENSCATG00000037539) #8	TBC1D13 (ENSCATG00000044380) #9	ENDOG (ENSCATG00000037516) #10	SPOUT1 (ENSCATG00000042611) #11	KYAT1 (ENSCATG00000043522) #12	LRRC8A (ENSCATG00000037564) #13	PHYHD1 (ENSCATG00000044875) #14	DOLK (ENSCATG00000017895) #15	NUP188 (ENSCATG00000039802) #16	ENSCATG00000034877	SH3GLB2 (ENSCATG00000038590) #18	MIGA2 (ENSCATG00000037290) #19	DOLPP1 (ENSCATG00000031498) #20	CRAT (ENSCATG00000039668) #21	ENSCATG00000039124	PTPA (ENSCATG00000033020) #22	IER5L (ENSCATG00000016036) #23	C9orf50 (ENSCATG00000037597)	NTMT1 (ENSCATG00000043725) #24	ASB6 (ENSCATG00000012160) #25	PRRX2 (ENSCATG00000039623)	ENSCATG00000037889	PTGES (ENSCATG00000032496) #26	TOR1B (ENSCATG00000005061) #27	TOR1A (ENSCATG00000045229) #28	C9orf78 (ENSCATG00000045151) #29	USP20 (ENSCATG00000004362) #30	FNBP1 (ENSCATG00000043882) #31	GPR107 (ENSCATG00000034370) #32	ENSCATG00000032284	NCS1 (ENSCATG00000033117)
Drill	MODERN SPECIES	1729							ENSMLEG00000030340	DOLK (ENSMLEG00000027811) #15	NUP188 (ENSMLEG00000031013) #16	ENSMLEG00000033174	SH3GLB2 (ENSMLEG00000042936) #18	MIGA2 (ENSMLEG00000029312) #19	DOLPP1 (ENSMLEG00000032287) #20	CRAT (ENSMLEG00000011139) #21	ENSMLEG00000037099	PTPA (ENSMLEG00000042722) #22	ENSMLEG00000041932	C9orf50 (ENSMLEG00000041404)	NTMT1 (ENSMLEG00000043763) #24	ASB6 (ENSMLEG00000027726) #25	PRRX2 (ENSMLEG00000010008)	ENSMLEG00000002851	PTGES (ENSMLEG00000039508) #26	TOR1B (ENSMLEG00000032114) #27	TOR1A (ENSMLEG00000043366) #28	C9orf78 (ENSMLEG00000031172) #29	USP20 (ENSMLEG00000041454) #30	FNBP1 (ENSMLEG00000035886) #31	GPR107 (ENSMLEG00000042178) #32	ENSMLEG00000039046	ENSMLEG00000038111 #33
Macaca	ANCESTRAL SPECIES	10	ENSGT00940000156902 #7	ENSGT00530000063187.A #8	ENSGT00940000158674 #9	ENSGT00940000160987 #10	ENSGT00390000016537 #11	ENSGT00940000158797 #12	ENSGT00940000154043.A #13	ENSGT00390000006287 #14	ENSGT00390000004067 #15	ENSGT00390000005742 #16	ENSGT00910000147377	ENSGT00940000155841 #18	ENSGT00390000008565.a.f #19	ENSGT00390000013112 #20	ENSGT01060000248556.A.a.a.a #21	ENSGT00390000011500 #22	ENSGT00910000147529	ENSGT00900000141021.b.a #23	ENSGT00390000004321	ENSGT00390000008371.b #24	ENSGT00390000006784 #25	ENSGT00940000161643	ENSGT00910000147997	ENSGT00390000011980.b.b #26	ENSGT00950000182888.a.a.a.j.a #27	ENSGT00950000182888.a.a.a.j.b #28	ENSGT00390000009787 #29	ENSGT00940000158829 #30	ENSGT00950000183047.d #31	ENSGT00940000160451 #32	ENSGT00940000154645.B
Pig-tailed macaque	MODERN SPECIES	317	ZDHHC12 (ENSMNEG00000030634) #7	ZER1 (ENSMNEG00000027302) #8	TBC1D13 (ENSMNEG00000041058) #9	ENDOG (ENSMNEG00000030787) #10	SPOUT1 (ENSMNEG00000042898) #11	KYAT1 (ENSMNEG00000031327) #12	LRRC8A (ENSMNEG00000030674) #13	PHYHD1 (ENSMNEG00000026623) #14	DOLK (ENSMNEG00000024878) #15	NUP188 (ENSMNEG00000035446) #16	SH3GLB2 (ENSMNEG00000030887) #18	ENSMNEG00000033167	MIGA2 (ENSMNEG00000044220) #19	DOLPP1 (ENSMNEG00000028372) #20	CRAT (ENSMNEG00000036535) #21	PTPA (ENSMNEG00000037634) #22	ENSMNEG00000044324	IER5L (ENSMNEG00000021854) #23	C9orf50 (ENSMNEG00000043353)	NTMT1 (ENSMNEG00000030491) #24	ASB6 (ENSMNEG00000043072) #25	PRRX2 (ENSMNEG00000029997)	PTGES (ENSMNEG00000042169) #26	ENSMNEG00000035626	TOR1B (ENSMNEG00000037097) #27	TOR1A (ENSMNEG00000040996) #28	C9orf78 (ENSMNEG00000036833) #29	USP20 (ENSMNEG00000031133) #30	FNBP1 (ENSMNEG00000038706) #31	GPR107 (ENSMNEG00000029615) #32	ENSMNEG00000034406 #33
Macaca_a	ANCESTRAL SPECIES	10	ENSGT00940000154891.g.b	ENSGT00940000161818	ENSGT00940000156902 #7	ENSGT00530000063187.A #8	ENSGT00940000158674 #9	ENSGT00390000016537 #11	ENSGT00940000158797 #12	ENSGT00940000154043.A #13	ENSGT00390000006287 #14	ENSGT00390000004067 #15	ENSGT00390000005742 #16	ENSGT00940000155841 #18	ENSGT00390000008565.a.f #19	ENSGT00390000013112 #20	ENSGT01060000248556.A.a.a.a #21	ENSGT00390000011500 #22	ENSGT00900000141021.b.a #23	ENSGT00390000004321	ENSGT00390000008371.b #24	ENSGT00390000006784 #25	ENSGT00940000161643	ENSGT00390000011980.b.b #26	ENSGT00950000182888.a.a.a.j.a #27	ENSGT00950000182888.a.a.a.j.b #28	ENSGT00940000158829 #30	ENSGT00950000183047.d #31	ENSGT00940000160451 #32	ENSGT00940000154645.B	ENSGT00940000162328	ENSGT00390000004524.c.a.a.a.b.d.b #34	ENSGT00910000147740
Crab-eating macaque	MODERN SPECIES	6	ODF2 (ENSMFAG00000001606)	GLE1 (ENSMFAG00000036995)	SPTAN1 (ENSMFAG00000044099)	DYNC2I2 (ENSMFAG00000042393)	ENSMFAG00000002535	ZDHHC12 (ENSMFAG00000002386) #7	ZER1 (ENSMFAG00000040364) #8	TBC1D13 (ENSMFAG00000033076) #9	SPOUT1 (ENSMFAG00000016739) #11	ENSMFAG00000065292	KYAT1 (ENSMFAG00000001847) #12	ENSMFAG00000034348 #19	ENSMFAG00000047842 #19	DOLPP1 (ENSMFAG00000038391) #20	CRAT (ENSMFAG00000002439) #21	PTPA (ENSMFAG00000036348) #22	ENSMFAG00000060828	C9orf50 (ENSMFAG00000033035)	NTMT1 (ENSMFAG00000058034) #24	ASB6 (ENSMFAG00000007597) #25	PRRX2 (ENSMFAG00000061112)	PTGES (ENSMFAG00000038160) #26	TOR1B (ENSMFAG00000046247) #27	TOR1A (ENSMFAG00000038660) #28	USP20 (ENSMFAG00000001850) #30	ENSMFAG00000060062	ENSMFAG00000056629	FNBP1 (ENSMFAG00000042440) #31	GPR107 (ENSMFAG00000045947) #32	ENSMFAG00000037355	ENSMFAG00000036140
Rhesus	MODERN SPECIES	6	ENSMMUG00000038373	PKN3 (ENSMMUG00000010143)	ZDHHC12 (ENSMMUG00000041713) #7	ZER1 (ENSMMUG00000010870) #8	TBC1D13 (ENSMMUG00000019179) #9	ENSMMUG00000047511 #11	ENSMMUG00000021848 #12	LRRC8A (ENSMMUG00000017799) #13	PHYHD1 (ENSMMUG00000032026) #14	DOLK (ENSMMUG00000011755) #15	NUP188 (ENSMMUG00000011757) #16	SH3GLB2 (ENSMMUG00000011759) #18	MIGA2 (ENSMMUG00000011765) #19	DOLPP1 (ENSMMUG00000032030) #20	CRAT (ENSMMUG00000011767) #21	PTPA (ENSMMUG00000002515) #22	IER5L (ENSMMUG00000049227) #23	ENSMMUG00000050813	C15H9orf50 (ENSMMUG00000009965)	NTMT1 (ENSMMUG00000006057) #24	ASB6 (ENSMMUG00000011816) #25	ENSMMUG00000056226	PRRX2 (ENSMMUG00000050493)	PTGES (ENSMMUG00000059501) #26	TOR1B (ENSMMUG00000003793) #27	C15H9orf78 (ENSMMUG00000058799) #28	USP20 (ENSMMUG00000003797) #30	FNBP1 (ENSMMUG00000003799) #31	GPR107 (ENSMMUG00000004200) #32	ENSMMUG00000049177	ENSMMUG00000061477
Vervet Monkey	MODERN SPECIES	3	DYNC2I2 (ENSCSAG00000014303)	PKN3 (ENSCSAG00000014351)	ZDHHC12 (ENSCSAG00000014378) #7	ZER1 (ENSCSAG00000014389) #8	TBC1D13 (ENSCSAG00000014420) #9	ENDOG (ENSCSAG00000014436) #10	KYAT1 (ENSCSAG00000014449) #12	LRRC8A (ENSCSAG00000014458) #13	PHYHD1 (ENSCSAG00000014469) #14	DOLK (ENSCSAG00000019710) #15	NUP188 (ENSCSAG00000014498) #16	SH3GLB2 (ENSCSAG00000014507) #18	MIGA2 (ENSCSAG00000014520) #19	DOLPP1 (ENSCSAG00000014528) #20	CRAT (ENSCSAG00000014540) #21	PTPA (ENSCSAG00000014550) #22	IER5L (ENSCSAG00000019709) #23	C9orf50 (ENSCSAG00000014564)	NTMT1 (ENSCSAG00000014600) #24	ASB6 (ENSCSAG00000014602) #25	PRRX2 (ENSCSAG00000014614)	PTGES (ENSCSAG00000014619) #26	TOR1B (ENSCSAG00000014644) #27	TOR1A (ENSCSAG00000014657) #28	C9orf78 (ENSCSAG00000014663) #29	USP20 (ENSCSAG00000014672) #30	FNBP1 (ENSCSAG00000014702) #31	GPR107 (ENSCSAG00000014709) #32	ENSCSAG00000014716 #33	ENSCSAG00000014723	ENSCSAG00000014730
Rhinopithecus	ANCESTRAL SPECIES	2	ENSGT00940000161818	ENSGT00940000156902 #7	ENSGT00530000063187.A #8	ENSGT00940000158674 #9	ENSGT00940000160987 #10	ENSGT00390000016537 #11	ENSGT00940000158797 #12	ENSGT00940000154043.A #13	ENSGT00390000006287 #14	ENSGT00390000004067 #15	ENSGT00390000005742 #16	ENSGT00940000155841 #18	ENSGT00390000008565.a #19	ENSGT00390000013112 #20	ENSGT01060000248556.A.a.a.a #21	ENSGT00390000011500 #22	ENSGT00900000141021.b.a #23	ENSGT00390000004321	ENSGT00390000008371.b #24	ENSGT00390000006784 #25	ENSGT00940000161643	ENSGT00390000011980.b.b #26	ENSGT00950000182888.a.a.a.j.a #27	ENSGT00950000182888.a.a.a.j.b #28	ENSGT00390000009787 #29	ENSGT00940000158829 #30	ENSGT00950000183047.d #31	ENSGT00940000160451 #32	ENSGT00940000154645.B	ENSGT00940000163010 #33	ENSGT00940000162328
Black snub-nosed monkey	MODERN SPECIES	1385	PKN3 (ENSRBIG00000033884)	ZDHHC12 (ENSRBIG00000029977) #7	ZER1 (ENSRBIG00000022292) #8	TBC1D13 (ENSRBIG00000039606) #9	ENDOG (ENSRBIG00000026558) #10	SPOUT1 (ENSRBIG00000026633) #11	KYAT1 (ENSRBIG00000030782) #12	LRRC8A (ENSRBIG00000036375) #13	PHYHD1 (ENSRBIG00000044267) #14	DOLK (ENSRBIG00000009633) #15	NUP188 (ENSRBIG00000025456) #16	SH3GLB2 (ENSRBIG00000029505) #18	MIGA2 (ENSRBIG00000033691) #19	DOLPP1 (ENSRBIG00000040274) #20	CRAT (ENSRBIG00000041667) #21	PTPA (ENSRBIG00000039155) #22	IER5L (ENSRBIG00000029366) #23	C9orf50 (ENSRBIG00000024166)	NTMT1 (ENSRBIG00000040305) #24	ASB6 (ENSRBIG00000036157) #25	PRRX2 (ENSRBIG00000003536)	PTGES (ENSRBIG00000039670) #26	TOR1B (ENSRBIG00000033643) #27	TOR1A (ENSRBIG00000034931) #28	C9orf78 (ENSRBIG00000030208) #29	USP20 (ENSRBIG00000037821) #30	FNBP1 (ENSRBIG00000040367) #31	GPR107 (ENSRBIG00000032381) #32	ENSRBIG00000032750 #33	HMCN2 (ENSRBIG00000023295)	ENSRBIG00000037102 #34
Golden snub-nosed monkey	MODERN SPECIES	923	PKN3 (ENSRROG00000039599)	ZDHHC12 (ENSRROG00000039840) #7	ZER1 (ENSRROG00000036128) #8	TBC1D13 (ENSRROG00000018115) #9	SPOUT1 (ENSRROG00000038155) #11	ENDOG (ENSRROG00000038553) #10	KYAT1 (ENSRROG00000044573) #12	LRRC8A (ENSRROG00000031274) #13	PHYHD1 (ENSRROG00000031502) #14	DOLK (ENSRROG00000025535) #15	NUP188 (ENSRROG00000032865) #16	SH3GLB2 (ENSRROG00000030807) #18	MIGA2 (ENSRROG00000045738) #19	DOLPP1 (ENSRROG00000041333) #20	CRAT (ENSRROG00000028685) #21	PTPA (ENSRROG00000034288) #22	C9orf50 (ENSRROG00000042155)	NTMT1 (ENSRROG00000044965) #24	ASB6 (ENSRROG00000031344) #25	PRRX2 (ENSRROG00000039533)	PTGES (ENSRROG00000027236) #26	TOR1B (ENSRROG00000028784) #27	TOR1A (ENSRROG00000040520) #28	C9orf78 (ENSRROG00000041927) #29	USP20 (ENSRROG00000036984) #30	FNBP1 (ENSRROG00000005509) #31	GPR107 (ENSRROG00000043544) #32	NCS1 (ENSRROG00000006485)	HMCN2 (ENSRROG00000031883)	ENSRROG00000018913 #34	ENSRROG00000030006 #35
Hominoidea	ANCESTRAL SPECIES	19	ENSGT00940000156902 #7	ENSGT00530000063187.A #8	ENSGT00940000158674 #9	ENSGT00940000160987 #10	ENSGT00390000016537 #11	ENSGT00940000158797 #12	ENSGT00940000154043.A #13	ENSGT00390000006287 #14	ENSGT00390000004067 #15	ENSGT00390000005742 #16	ENSGT00910000147377	ENSGT00940000155841 #18	ENSGT00390000008565.a #19	ENSGT00390000013112 #20	ENSGT01060000248556.A.a.a.a #21	ENSGT00390000011500 #22	ENSGT00900000141021.b.a #23	ENSGT00910000147507	ENSGT00910000148026	ENSGT00390000004321	ENSGT00390000008371.b #24	ENSGT00390000006784 #25	ENSGT00940000161643	ENSGT00910000147997	ENSGT00390000011980.b.b #26	ENSGT00950000182888.a.a.a.j.a #27	ENSGT00950000182888.a.a.a.j.b #28	ENSGT00390000009787 #29	ENSGT00940000158829 #30	ENSGT00950000183047.d #31	ENSGT00940000160451 #32
Hominidae	ANCESTRAL SPECIES	10	ENSGT00940000156902 #7	ENSGT00530000063187.A #8	ENSGT00940000158674 #9	ENSGT00940000160987 #10	ENSGT00390000016537 #11	ENSGT00940000158797 #12	ENSGT00940000154043.A #13	ENSGT00390000006287 #14	ENSGT00390000004067 #15	ENSGT00390000005742 #16	ENSGT00910000147377	ENSGT00940000155841 #18	ENSGT00390000008565.a #19	ENSGT00390000013112 #20	ENSGT01060000248556.A.a.a.a #21	ENSGT00390000011500 #22	ENSGT00900000141021.b.a #23	ENSGT00910000147507	ENSGT00910000148026	ENSGT00390000004321	ENSGT00390000008371.b #24	ENSGT00390000006784 #25	ENSGT00940000161643	ENSGT00910000147997	ENSGT00390000011980.b.b #26	ENSGT00950000182888.a.a.a.j.a #27	ENSGT00950000182888.a.a.a.j.b #28	ENSGT00390000009787 #29	ENSGT00940000158829 #30	ENSGT00950000183047.d #31	ENSGT00940000160451 #32
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	10	ENSGT00940000156902 #7	ENSGT00530000063187.A #8	ENSGT00940000158674 #9	ENSGT00940000160987 #10	ENSGT00390000016537 #11	ENSGT00940000158797 #12	ENSGT00940000154043.A #13	ENSGT00390000006287 #14	ENSGT00390000004067 #15	ENSGT00390000005742 #16	ENSGT00910000147377	ENSGT00940000155841 #18	ENSGT00390000008565.a #19	ENSGT00390000013112 #20	ENSGT01060000248556.A.a.a.a #21	ENSGT00390000011500 #22	ENSGT00900000141021.b.a #23	ENSGT00910000147507	ENSGT00910000148026	ENSGT00390000004321	ENSGT00390000008371.b #24	ENSGT00390000006784 #25	ENSGT00940000161643	ENSGT00910000147997	ENSGT00390000011980.b.b #26	ENSGT00950000182888.a.a.a.j.a #27	ENSGT00950000182888.a.a.a.j.b #28	ENSGT00390000009787 #29	ENSGT00940000158829 #30	ENSGT00950000183047.d #31	ENSGT00940000160451 #32
Homo/Pan group	ANCESTRAL SPECIES	16	ENSGT00940000161818	ENSGT00940000156902 #7	ENSGT00530000063187.A #8	ENSGT00940000158674 #9	ENSGT00940000160987 #10	ENSGT00390000016537 #11	ENSGT00940000158797 #12	ENSGT00940000154043.A #13	ENSGT00390000006287 #14	ENSGT00390000004067 #15	ENSGT00390000005742 #16	ENSGT00940000155841 #18	ENSGT00390000008565.a #19	ENSGT00390000013112 #20	ENSGT01060000248556.A.a.a.a #21	ENSGT00390000011500 #22	ENSGT00900000141021.b.a #23	ENSGT00910000147507	ENSGT00910000148026	ENSGT00390000004321	ENSGT00390000008371.b #24	ENSGT00390000006784 #25	ENSGT00940000161643	ENSGT00910000147997	ENSGT00390000011980.b.b #26	ENSGT00950000182888.a.a.a.j.a #27	ENSGT00950000182888.a.a.a.j.b #28	ENSGT00390000009787 #29	ENSGT00940000158829 #30	ENSGT00950000183047.d #31	ENSGT00940000160451 #32
Pan	ANCESTRAL SPECIES	18	ENSGT00940000161818	ENSGT00940000156902 #7	ENSGT00530000063187.A #8	ENSGT00940000158674 #9	ENSGT00940000160987 #10	ENSGT00390000016537 #11	ENSGT00940000158797 #12	ENSGT00940000154043.A #13	ENSGT00390000006287 #14	ENSGT00390000004067 #15	ENSGT00390000005742 #16	ENSGT00940000155841 #18	ENSGT00390000008565.a #19	ENSGT00390000013112 #20	ENSGT01060000248556.A.a.a.a #21	ENSGT00390000011500 #22	ENSGT00900000141021.b.a #23	ENSGT00910000147507	ENSGT00910000148026	ENSGT00390000004321	ENSGT00390000008371.b #24	ENSGT00390000006784 #25	ENSGT00940000161643	ENSGT00910000147997	ENSGT00390000011980.b.b #26	ENSGT00950000182888.a.a.a.j.a #27	ENSGT00950000182888.a.a.a.j.b #28	ENSGT00390000009787 #29	ENSGT00940000158829 #30	ENSGT00950000183047.d #31	ENSGT00940000160451 #32
Chimpanzee	DUPLICATION
Chimpanzee	MODERN SPECIES	22	PKN3 (ENSPTRG00000021437)	ZDHHC12 (ENSPTRG00000021438) #7	ZER1 (ENSPTRG00000021439) #8	TBC1D13 (ENSPTRG00000021440) #9	ENDOG (ENSPTRG00000029057) #10	SPOUT1 (ENSPTRG00000023427) #11	KYAT1 (ENSPTRG00000021442) #12	LRRC8A (ENSPTRG00000021443) #13	PHYHD1 (ENSPTRG00000021444) #14	DOLK (ENSPTRG00000029053) #15	NUP188 (ENSPTRG00000021445) #16	SH3GLB2 (ENSPTRG00000021447) #18	MIGA2 (ENSPTRG00000021449) #19	DOLPP1 (ENSPTRG00000021451) #20	CRAT (ENSPTRG00000021452) #21	PTPA (ENSPTRG00000021453) #22	ENSPTRG00000044141 #23	ENSPTRG00000043633	ENSPTRG00000045885	NTMT1 (ENSPTRG00000021459) #24	C9H9orf50 (ENSPTRG00000021458)	ASB6 (ENSPTRG00000021460) #25	PRRX2 (ENSPTRG00000021461)	ENSPTRG00000052253	PTGES (ENSPTRG00000021462) #26	TOR1B (ENSPTRG00000023109) #27	TOR1A (ENSPTRG00000022599) #28	C9H9orf78 (ENSPTRG00000021465) #29	USP20 (ENSPTRG00000021466) #30	FNBP1 (ENSPTRG00000021468) #31	GPR107 (ENSPTRG00000021469) #32
Chimpanzee	MODERN SPECIES	671									ENSPTRG00000049934	ENSPTRG00000042778 #15	ENSPTRG00000050851 #16	ENSPTRG00000052379 #18	ENSPTRG00000044579 #19	ENSPTRG00000047001 #20	ENSPTRG00000048224 #21	ENSPTRG00000044510 #22	ENSPTRG00000042692 #23
Bonobo	MODERN SPECIES	22	PKN3 (ENSPPAG00000043402)	ZDHHC12 (ENSPPAG00000039041) #7	ZER1 (ENSPPAG00000033759) #8	TBC1D13 (ENSPPAG00000014377) #9	ENSPPAG00000041190 #10	SPOUT1 (ENSPPAG00000001094) #11	KYAT1 (ENSPPAG00000036497) #12	LRRC8A (ENSPPAG00000043862) #13	ENSPPAG00000034131 #14	DOLK (ENSPPAG00000016072) #15	NUP188 (ENSPPAG00000038013) #16	SH3GLB2 (ENSPPAG00000039212) #18	MIGA2 (ENSPPAG00000029917) #19	DOLPP1 (ENSPPAG00000038994) #20	CRAT (ENSPPAG00000013780) #21	PTPA (ENSPPAG00000040780) #22	ENSPPAG00000022286	ENSPPAG00000028686	ENSPPAG00000038811	NTMT1 (ENSPPAG00000038284) #24	ASB6 (ENSPPAG00000031685) #25	ENSPPAG00000031141	PTGES (ENSPPAG00000031231) #26	TOR1B (ENSPPAG00000030907) #27	ENSPPAG00000031041 #28	C9orf78 (ENSPPAG00000032236) #29	USP20 (ENSPPAG00000043597) #30	FNBP1 (ENSPPAG00000014368) #31	GPR107 (ENSPPAG00000031540) #32	ENSPPAG00000023411	NCS1 (ENSPPAG00000034386)
Human	MODERN SPECIES	21	ZER1 (ENSG00000160445) #8	TBC1D13 (ENSG00000107021) #9	ENDOG (ENSG00000167136) #10	SPOUT1 (ENSG00000198917) #11	ENSG00000286112	KYAT1 (ENSG00000171097) #12	LRRC8A (ENSG00000136802) #13	PHYHD1 (ENSG00000175287) #14	ENSG00000251184	DOLK (ENSG00000175283) #15	NUP188 (ENSG00000095319) #16	SH3GLB2 (ENSG00000148341) #18	MIGA2 (ENSG00000148343) #19	DOLPP1 (ENSG00000167130) #20	CRAT (ENSG00000095321) #21	PTPA (ENSG00000119383) #22	ENSG00000235007	IER5L (ENSG00000188483) #23	NTMT1 (ENSG00000148335) #24	C9orf50 (ENSG00000179058)	ASB6 (ENSG00000148331) #25	PRRX2 (ENSG00000167157)	PTGES (ENSG00000148344) #26	TOR1B (ENSG00000136816) #27	TOR1A (ENSG00000136827) #28	C9orf78 (ENSG00000136819) #29	USP20 (ENSG00000136878) #30	FNBP1 (ENSG00000187239) #31	GPR107 (ENSG00000148358) #32	NCS1 (ENSG00000107130)	HMCN2 (ENSG00000148357)
Orangutan	MODERN SPECIES	22	PKN3 (ENSPPYG00000029746)	ENSPPYG00000019660 #7	ZER1 (ENSPPYG00000019661) #8	TBC1D13 (ENSPPYG00000019662) #9	ENDOG (ENSPPYG00000031616) #10	ENSPPYG00000019664 #11	ENSPPYG00000019665 #12	LRRC8A (ENSPPYG00000019666) #13	ENSPPYG00000019668 #14	DOLK (ENSPPYG00000019669) #15	NUP188 (ENSPPYG00000019670) #16	SH3GLB2 (ENSPPYG00000019671) #18	MIGA2 (ENSPPYG00000019672) #19	DOLPP1 (ENSPPYG00000019673) #20	CRAT (ENSPPYG00000019674) #21	PTPA (ENSPPYG00000019675) #22	ENSPPYG00000033180	IER5L (ENSPPYG00000040601) #23	C9orf50 (ENSPPYG00000019678)	NTMT1 (ENSPPYG00000019679) #24	ASB6 (ENSPPYG00000019680) #25	PRRX2 (ENSPPYG00000019681)	PTGES (ENSPPYG00000034954) #26	ENSPPYG00000038329	TOR1B (ENSPPYG00000019683) #27	TOR1A (ENSPPYG00000019684) #28	C9H9orf78 (ENSPPYG00000019685) #29	USP20 (ENSPPYG00000019686) #30	FNBP1 (ENSPPYG00000019687) #31	GPR107 (ENSPPYG00000019688) #32	NCS1 (ENSPPYG00000030119)
Gibbon	MODERN SPECIES	23	ZER1 (ENSNLEG00000017607) #8	TBC1D13 (ENSNLEG00000017611) #9	ENSNLEG00000017615 #10	SPOUT1 (ENSNLEG00000017619) #11	ENSNLEG00000017629 #12	ENSNLEG00000035638	LRRC8A (ENSNLEG00000017633) #13	ENSNLEG00000033295 #14	DOLK (ENSNLEG00000019000) #15	NUP188 (ENSNLEG00000029734) #16	ENSNLEG00000017636 #18	ENSNLEG00000017638	MIGA2 (ENSNLEG00000017639) #19	DOLPP1 (ENSNLEG00000017640) #20	CRAT (ENSNLEG00000017641) #21	PTPA (ENSNLEG00000017644) #22	ENSNLEG00000017646	ENSNLEG00000035309	NTMT1 (ENSNLEG00000029821) #24	ENSNLEG00000035118	ASB6 (ENSNLEG00000017651) #25	ENSNLEG00000017653	PTGES (ENSNLEG00000017654) #26	TOR1B (ENSNLEG00000017655) #27	TOR1A (ENSNLEG00000032656) #28	C9orf78 (ENSNLEG00000017658) #29	USP20 (ENSNLEG00000017660) #30	FNBP1 (ENSNLEG00000017666) #31	GPR107 (ENSNLEG00000017669) #32	ENSNLEG00000017681	ENSNLEG00000017684 #33
Platyrrhini	ANCESTRAL SPECIES	8	ENSGT00940000161818	ENSGT00940000156902 #7	ENSGT00530000063187.A #8	ENSGT00940000158674 #9	ENSGT00940000160987 #10	ENSGT00390000016537 #11	ENSGT00940000158797 #12	ENSGT00940000154043.A #13	ENSGT00390000006287 #14	ENSGT00390000004067 #15	ENSGT00390000005742 #16	ENSGT00940000155841 #18	ENSGT00390000008565.a #19	ENSGT00390000013112 #20	ENSGT01060000248556.A.a.a.a #21	ENSGT00390000011500 #22	ENSGT00900000141021.b.a #23	ENSGT00390000004321	ENSGT00390000008371.b #24	ENSGT00390000006784 #25	ENSGT00940000161643	ENSGT00390000011980.b.b #26	ENSGT00950000182888.a.a.a.j.a.i #27	ENSGT00950000182888.a.a.a.j.b #28	ENSGT00390000009787 #29	ENSGT00940000158829 #30	ENSGT00950000183047.d #31	ENSGT00940000160451 #32	ENSGT00910000146910	ENSGT00940000163010 #33	ENSGT00940000162328
Cebidae	ANCESTRAL SPECIES	7	ENSGT00940000161818	ENSGT00940000156902 #7	ENSGT00530000063187.A #8	ENSGT00940000158674 #9	ENSGT00940000160987 #10	ENSGT00390000016537 #11	ENSGT00940000158797 #12	ENSGT00940000154043.A #13	ENSGT00390000006287 #14	ENSGT00390000004067 #15	ENSGT00390000005742 #16	ENSGT00940000155841 #18	ENSGT00390000008565.a #19	ENSGT00390000013112 #20	ENSGT01060000248556.A.a.a.a #21	ENSGT00390000011500 #22	ENSGT00900000141021.b.a #23	ENSGT00390000004321	ENSGT00390000008371.b #24	ENSGT00390000006784 #25	ENSGT00940000161643	ENSGT00390000011980.b.b #26	ENSGT00950000182888.a.a.a.j.a.i #27	ENSGT00950000182888.a.a.a.j.b #28	ENSGT00390000009787 #29	ENSGT00940000158829 #30	ENSGT00950000183047.d #31	ENSGT00940000160451 #32	ENSGT00910000146910	ENSGT00940000163010 #33	ENSGT00940000162328
Cebidae_a	ANCESTRAL SPECIES	76	ENSGT00940000161818	ENSGT00940000156902 #7	ENSGT00530000063187.A #8	ENSGT00940000158674 #9	ENSGT00940000160987 #10	ENSGT00390000016537 #11	ENSGT00940000158797 #12	ENSGT00940000154043.A #13	ENSGT00390000006287 #14	ENSGT00390000004067 #15	ENSGT00390000005742 #16	ENSGT00940000155841 #18	ENSGT00390000008565.a #19	ENSGT00390000013112 #20	ENSGT01060000248556.A.a.a.a #21	ENSGT00390000011500 #22	ENSGT00900000141021.b.a #23	ENSGT00390000004321	ENSGT00390000008371.b #24	ENSGT00390000006784 #25	ENSGT00940000161643	ENSGT00390000011980.b.b #26	ENSGT00950000182888.a.a.a.j.a.i #27	ENSGT00950000182888.a.a.a.j.b #28	ENSGT00390000009787 #29	ENSGT00940000158829 #30	ENSGT00950000183047.d #31	ENSGT00940000160451 #32	ENSGT00910000146910	ENSGT00940000163010 #33	ENSGT00940000154645.B
Bolivian squirrel monkey	MODERN SPECIES	163	PKN3 (ENSSBOG00000027249)	ZDHHC12 (ENSSBOG00000019743) #7	ZER1 (ENSSBOG00000019088) #8	TBC1D13 (ENSSBOG00000025129) #9	ENDOG (ENSSBOG00000019144) #10	SPOUT1 (ENSSBOG00000032987) #11	KYAT1 (ENSSBOG00000026132) #12	LRRC8A (ENSSBOG00000020445) #13	PHYHD1 (ENSSBOG00000024385) #14	DOLK (ENSSBOG00000019671) #15	NUP188 (ENSSBOG00000028811) #16	SH3GLB2 (ENSSBOG00000031843) #18	MIGA2 (ENSSBOG00000016384) #19	DOLPP1 (ENSSBOG00000027570) #20	CRAT (ENSSBOG00000009452) #21	PTPA (ENSSBOG00000025076) #22	C9orf50 (ENSSBOG00000026313)	NTMT1 (ENSSBOG00000018752) #24	ASB6 (ENSSBOG00000028309) #25	PRRX2 (ENSSBOG00000030397)	ENSSBOG00000019940	PTGES (ENSSBOG00000023348) #26	TOR1B (ENSSBOG00000022661) #27	TOR1A (ENSSBOG00000011197) #28	C9orf78 (ENSSBOG00000028239) #29	USP20 (ENSSBOG00000025404) #30	FNBP1 (ENSSBOG00000021918) #31	GPR107 (ENSSBOG00000018705) #32	ENSSBOG00000028307	ENSSBOG00000000774	ENSSBOG00000014367
Capuchin	MODERN SPECIES	254	PKN3 (ENSCCAG00000036299)	ZDHHC12 (ENSCCAG00000020470) #7	ZER1 (ENSCCAG00000022539) #8	TBC1D13 (ENSCCAG00000026892) #9	ENDOG (ENSCCAG00000028186) #10	SPOUT1 (ENSCCAG00000037842) #11	KYAT1 (ENSCCAG00000026517) #12	LRRC8A (ENSCCAG00000017493) #13	PHYHD1 (ENSCCAG00000024162) #14	DOLK (ENSCCAG00000005576) #15	NUP188 (ENSCCAG00000031991) #16	SH3GLB2 (ENSCCAG00000024067) #18	MIGA2 (ENSCCAG00000033917) #19	DOLPP1 (ENSCCAG00000035231) #20	CRAT (ENSCCAG00000032337) #21	PTPA (ENSCCAG00000036157) #22	IER5L (ENSCCAG00000010737) #23	C9orf50 (ENSCCAG00000037996)	NTMT1 (ENSCCAG00000030955) #24	ASB6 (ENSCCAG00000028448) #25	PRRX2 (ENSCCAG00000021160)	PTGES (ENSCCAG00000029282) #26	ENSCCAG00000021123 #27	TOR1A (ENSCCAG00000029451) #28	C9orf78 (ENSCCAG00000031507) #29	USP20 (ENSCCAG00000036441) #30	ENSCCAG00000026582	FNBP1 (ENSCCAG00000027876) #31	ENSCCAG00000023927	GPR107 (ENSCCAG00000023523) #32	NCS1 (ENSCCAG00000004740)
Marmoset	MODERN SPECIES		ENSCJAG00000047551	PKN3 (ENSCJAG00000020165)	ZDHHC12 (ENSCJAG00000020184) #7	ZER1 (ENSCJAG00000020189) #8	TBC1D13 (ENSCJAG00000020207) #9	ENDOG (ENSCJAG00000020220) #10	SPOUT1 (ENSCJAG00000020221) #11	KYAT1 (ENSCJAG00000020240) #12	LRRC8A (ENSCJAG00000020246) #13	PHYHD1 (ENSCJAG00000020054) #14	DOLK (ENSCJAG00000020248) #15	NUP188 (ENSCJAG00000020249) #16	SH3GLB2 (ENSCJAG00000020282) #18	MIGA2 (ENSCJAG00000020285) #19	CRAT (ENSCJAG00000020293) #21	PTPA (ENSCJAG00000020295) #22	IER5L (ENSCJAG00000046685) #23	ENSCJAG00000069444	C9orf50 (ENSCJAG00000020306)	NTMT1 (ENSCJAG00000020309) #24	ASB6 (ENSCJAG00000020312) #25	PRRX2 (ENSCJAG00000020303)	PTGES (ENSCJAG00000086828) #26	TOR1B (ENSCJAG00000020343) #27	TOR1A (ENSCJAG00000020346) #28	ENSCJAG00000020318 #29	USP20 (ENSCJAG00000020348) #30	FNBP1 (ENSCJAG00000020360) #31	GPR107 (ENSCJAG00000020376) #32	ENSCJAG00000020388 #33	HMCN2 (ENSCJAG00000020578)
Mas night monkey	MODERN SPECIES	768	ENSANAG00000025517	PKN3 (ENSANAG00000034145)	ZDHHC12 (ENSANAG00000035881) #7	ZER1 (ENSANAG00000029586) #8	TBC1D13 (ENSANAG00000036964) #9	SPOUT1 (ENSANAG00000036350) #11	KYAT1 (ENSANAG00000034498) #12	LRRC8A (ENSANAG00000035694) #13	PHYHD1 (ENSANAG00000036355) #14	DOLK (ENSANAG00000012512) #15	NUP188 (ENSANAG00000036382) #16	SH3GLB2 (ENSANAG00000022410) #18	MIGA2 (ENSANAG00000034478) #19	DOLPP1 (ENSANAG00000037795) #20	CRAT (ENSANAG00000037185) #21	PTPA (ENSANAG00000022142) #22	IER5L (ENSANAG00000036029) #23	NTMT1 (ENSANAG00000029680) #24	ASB6 (ENSANAG00000025599) #25	PRRX2 (ENSANAG00000022713)	PTGES (ENSANAG00000033808) #26	TOR1B (ENSANAG00000021948) #27	TOR1A (ENSANAG00000022800) #28	C9orf78 (ENSANAG00000037186) #29	USP20 (ENSANAG00000033852) #30	FNBP1 (ENSANAG00000034541) #31	GPR107 (ENSANAG00000028584) #32	ENSANAG00000019861	ENSANAG00000023513	HMCN2 (ENSANAG00000024488)	ENSANAG00000029569 #34
Tarsier	MODERN SPECIES	1500																PTPA (ENSTSYG00000026186) #22
Strepsirrhini	ANCESTRAL SPECIES	8	ENSGT00940000161818	ENSGT00940000156902 #7	ENSGT00530000063187.A #8	ENSGT00940000158674 #9	ENSGT00940000160987 #10	ENSGT00390000016537 #11	ENSGT00940000158797 #12	ENSGT00940000154043.A #13	ENSGT00390000006287 #14	ENSGT00390000004067 #15	ENSGT00390000005742 #16	ENSGT00940000155841 #18	ENSGT00390000008565.a #19	ENSGT00390000013112 #20	ENSGT01060000248556.A.a.a.a #21	ENSGT00390000011500 #22	ENSGT00900000141021.b.a #23	ENSGT00390000004321	ENSGT00390000008371.b #24	ENSGT00390000006784 #25	ENSGT00940000161643	ENSGT00390000011980.b.b #26	ENSGT00950000182888.a.a.a.j.a #27	ENSGT00950000182888.a.a.a.j.b #28	ENSGT00390000009787 #29	ENSGT00940000158829 #30	ENSGT00950000183047.d #31	ENSGT00940000160451 #32	ENSGT00940000154645.B	ENSGT00940000162328	ENSGT00940000165095
Bushbaby	DUPLICATION
Bushbaby	MODERN SPECIES	202	ZDHHC12 (ENSOGAG00000024479) #7	ZER1 (ENSOGAG00000004996) #8	TBC1D13 (ENSOGAG00000005629) #9	ENDOG (ENSOGAG00000024803) #10	SPOUT1 (ENSOGAG00000001655) #11	ENSOGAG00000001657 #12	LRRC8A (ENSOGAG00000033697) #13	PHYHD1 (ENSOGAG00000006233) #14	DOLK (ENSOGAG00000025919) #15	ENSOGAG00000009024 #16	ENSOGAG00000031167 #16	SH3GLB2 (ENSOGAG00000009035) #18	MIGA2 (ENSOGAG00000009043) #19	DOLPP1 (ENSOGAG00000009049) #20	CRAT (ENSOGAG00000009051) #21	ENSOGAG00000033098 #22	ENSOGAG00000031326 #22	IER5L (ENSOGAG00000009697) #23	C9orf50 (ENSOGAG00000013856)	NTMT1 (ENSOGAG00000013857) #24	ASB6 (ENSOGAG00000033025) #25	PRRX2 (ENSOGAG00000027216)	ENSOGAG00000009758 #26	TOR1B (ENSOGAG00000009763) #27	TOR1A (ENSOGAG00000009766) #28	C9orf78 (ENSOGAG00000009770) #29	USP20 (ENSOGAG00000009775) #30	FNBP1 (ENSOGAG00000034453) #31	GPR107 (ENSOGAG00000009786) #32	ENSOGAG00000024831 #33	ENSOGAG00000026068
Bushbaby	MODERN SPECIES	202	ZER1 (ENSOGAG00000004996) #8	TBC1D13 (ENSOGAG00000005629) #9	ENDOG (ENSOGAG00000024803) #10	SPOUT1 (ENSOGAG00000001655) #11	ENSOGAG00000001657 #12	LRRC8A (ENSOGAG00000033697) #13	PHYHD1 (ENSOGAG00000006233) #14	DOLK (ENSOGAG00000025919) #15	ENSOGAG00000009024 #16	ENSOGAG00000031167 #16	SH3GLB2 (ENSOGAG00000009035) #18	MIGA2 (ENSOGAG00000009043) #19	DOLPP1 (ENSOGAG00000009049) #20	CRAT (ENSOGAG00000009051) #21	ENSOGAG00000033098 #22	ENSOGAG00000031326 #22	IER5L (ENSOGAG00000009697) #23	C9orf50 (ENSOGAG00000013856)	NTMT1 (ENSOGAG00000013857) #24	ASB6 (ENSOGAG00000033025) #25	PRRX2 (ENSOGAG00000027216)	ENSOGAG00000009758 #26	TOR1B (ENSOGAG00000009763) #27	TOR1A (ENSOGAG00000009766) #28	C9orf78 (ENSOGAG00000009770) #29	USP20 (ENSOGAG00000009775) #30	FNBP1 (ENSOGAG00000034453) #31	GPR107 (ENSOGAG00000009786) #32	ENSOGAG00000024831 #33	ENSOGAG00000026068	ENSOGAG00000031371
Lemuriformes	ANCESTRAL SPECIES	12	ENSGT00940000161818	ENSGT00940000156902 #7	ENSGT00530000063187.A #8	ENSGT00940000158674 #9	ENSGT00940000160987 #10	ENSGT00390000016537 #11	ENSGT00940000158797 #12	ENSGT00940000154043.A #13	ENSGT00390000006287 #14	ENSGT00390000004067 #15	ENSGT00390000005742 #16	ENSGT00940000155841 #18	ENSGT00390000008565.a #19	ENSGT00390000013112 #20	ENSGT01060000248556.A.a.a.a #21	ENSGT00390000011500 #22	ENSGT00900000141021.b.a #23	ENSGT00390000004321	ENSGT00390000008371.b #24	ENSGT00390000006784 #25	ENSGT00940000161643	ENSGT00390000011980.b.b #26	ENSGT00950000182888.a.a.a.j.a #27	ENSGT00950000182888.a.a.a.j.b #28	ENSGT00390000009787 #29	ENSGT00940000158829 #30	ENSGT00950000183047.d #31	ENSGT00940000160451 #32	ENSGT00940000154645.B	ENSGT00940000162328	ENSGT00390000004524 #34
Mouse lemur	MODERN SPECIES	1	PKN3 (ENSMICG00000017644)	ZDHHC12 (ENSMICG00000017645) #7	ZER1 (ENSMICG00000017646) #8	TBC1D13 (ENSMICG00000017647) #9	ENDOG (ENSMICG00000017648) #10	SPOUT1 (ENSMICG00000017649) #11	KYAT1 (ENSMICG00000014042) #12	LRRC8A (ENSMICG00000036276) #13	PHYHD1 (ENSMICG00000005825) #14	DOLK (ENSMICG00000005845) #15	NUP188 (ENSMICG00000005848) #16	SH3GLB2 (ENSMICG00000005895) #18	MIGA2 (ENSMICG00000033236) #19	DOLPP1 (ENSMICG00000005907) #20	CRAT (ENSMICG00000005911) #21	PTPA (ENSMICG00000005925) #22	IER5L (ENSMICG00000028875) #23	C9orf50 (ENSMICG00000038544)	NTMT1 (ENSMICG00000029094) #24	ASB6 (ENSMICG00000007596) #25	PRRX2 (ENSMICG00000028857)	PTGES (ENSMICG00000035671) #26	TOR1B (ENSMICG00000009585) #27	TOR1A (ENSMICG00000009593) #28	ENSMICG00000009596 #29	USP20 (ENSMICG00000016384) #30	FNBP1 (ENSMICG00000009605) #31	GPR107 (ENSMICG00000009620) #32	NCS1 (ENSMICG00000041760)	HMCN2 (ENSMICG00000030080)	ASS1 (ENSMICG00000013307) #34
Lemuriformes_a	ANCESTRAL SPECIES	2	ENSGT00940000161818	ENSGT00940000156902 #7	ENSGT00530000063187.A #8	ENSGT00940000158674 #9	ENSGT00940000160987 #10	ENSGT00390000016537 #11	ENSGT00940000158797 #12	ENSGT00940000154043.A #13	ENSGT00390000006287 #14	ENSGT00390000004067 #15	ENSGT00390000005742 #16	ENSGT00940000155841 #18	ENSGT00390000008565.a #19	ENSGT00390000013112 #20	ENSGT01060000248556.A.a.a.a #21	ENSGT00390000011500 #22	ENSGT00900000141021.b.a #23	ENSGT00390000004321	ENSGT00390000008371.b #24	ENSGT00390000006784 #25	ENSGT00940000161643	ENSGT00390000011980.b.b #26	ENSGT00950000182888.a.a.a.j.a #27	ENSGT00950000182888.a.a.a.j.b #28	ENSGT00390000009787 #29	ENSGT00940000158829 #30	ENSGT00950000183047.d #31	ENSGT00940000160451 #32	ENSGT00940000154645.B	ENSGT00940000162328	ENSGT00390000004524 #34
Greater bamboo lemur	MODERN SPECIES	638	ZDHHC12 (ENSPSMG00000020443) #7	ZER1 (ENSPSMG00000020427) #8	TBC1D13 (ENSPSMG00000020397) #9	ENDOG (ENSPSMG00000020374) #10	SPOUT1 (ENSPSMG00000020365) #11	ENSPSMG00000020358	KYAT1 (ENSPSMG00000020315) #12	LRRC8A (ENSPSMG00000020267) #13	PHYHD1 (ENSPSMG00000020240) #14	DOLK (ENSPSMG00000020148) #15	NUP188 (ENSPSMG00000020127) #16	SH3GLB2 (ENSPSMG00000019972) #18	MIGA2 (ENSPSMG00000019731) #19	DOLPP1 (ENSPSMG00000019683) #20	CRAT (ENSPSMG00000019659) #21	PTPA (ENSPSMG00000019620) #22	ENSPSMG00000019528	NTMT1 (ENSPSMG00000019523) #24	ASB6 (ENSPSMG00000019504) #25	PRRX2 (ENSPSMG00000019459)	PTGES (ENSPSMG00000019452) #26	TOR1B (ENSPSMG00000019444) #27	TOR1A (ENSPSMG00000019434) #28	C9orf78 (ENSPSMG00000019422) #29	USP20 (ENSPSMG00000019349) #30	FNBP1 (ENSPSMG00000019223) #31	GPR107 (ENSPSMG00000019182) #32	HMCN2 (ENSPSMG00000019168)	ASS1 (ENSPSMG00000019105) #34	FUBP3 (ENSPSMG00000019055) #35	PRDM12 (ENSPSMG00000019030) #36
Coquerels sifaka	MODERN SPECIES	168	PKN3 (ENSPCOG00000027227)	ZDHHC12 (ENSPCOG00000014328) #7	ZER1 (ENSPCOG00000027080) #8	TBC1D13 (ENSPCOG00000016027) #9	ENDOG (ENSPCOG00000022447) #10	SPOUT1 (ENSPCOG00000002584) #11	KYAT1 (ENSPCOG00000025020) #12	LRRC8A (ENSPCOG00000014012) #13	PHYHD1 (ENSPCOG00000024815) #14	DOLK (ENSPCOG00000013396) #15	NUP188 (ENSPCOG00000022765) #16	SH3GLB2 (ENSPCOG00000006774) #18	MIGA2 (ENSPCOG00000003498) #19	DOLPP1 (ENSPCOG00000016455) #20	CRAT (ENSPCOG00000014482) #21	PTPA (ENSPCOG00000027977) #22	IER5L (ENSPCOG00000013497) #23	C9orf50 (ENSPCOG00000023076)	NTMT1 (ENSPCOG00000027997) #24	ASB6 (ENSPCOG00000021385) #25	PRRX2 (ENSPCOG00000023672)	PTGES (ENSPCOG00000016010) #26	TOR1B (ENSPCOG00000008511) #27	TOR1A (ENSPCOG00000020399) #28	C9orf78 (ENSPCOG00000026688) #29	USP20 (ENSPCOG00000017362) #30	FNBP1 (ENSPCOG00000018475) #31	GPR107 (ENSPCOG00000024575) #32	NCS1 (ENSPCOG00000023614)	HMCN2 (ENSPCOG00000020292)	ASS1 (ENSPCOG00000016448) #34
Laurasiatheria	ANCESTRAL SPECIES	9	ENSGT00940000161818	ENSGT00940000156902 #7	ENSGT00530000063187.A #8	ENSGT00940000158674 #9	ENSGT00940000160987 #10	ENSGT00390000016537 #11	ENSGT00940000158797 #12	ENSGT00940000154043.A #13	ENSGT00390000006287 #14	ENSGT00390000004067 #15	ENSGT00390000005742 #16	ENSGT00940000155841 #18	ENSGT00390000008565.a #19	ENSGT00390000013112 #20	ENSGT01060000248556.A.a.a.a #21	ENSGT00390000011500 #22	ENSGT00900000141021.b.a #23	ENSGT00390000004321	ENSGT00390000008371.b #24	ENSGT00390000006784 #25	ENSGT00940000161643	ENSGT00390000011980.b.b #26	ENSGT00950000182888.a.a.a.j.a #27	ENSGT00950000182888.a.a.a.j.b #28	ENSGT00390000009787 #29	ENSGT00940000158829 #30	ENSGT00950000183047.d #31	ENSGT00940000160451 #32	ENSGT00940000154645.B	ENSGT00940000162328	ENSGT00960000189405
Laurasiatheria_a	ANCESTRAL SPECIES	11	ENSGT00940000161818	ENSGT00940000156902 #7	ENSGT00530000063187.A #8	ENSGT00940000158674 #9	ENSGT00940000160987 #10	ENSGT00390000016537 #11	ENSGT00940000158797 #12	ENSGT00940000154043.A #13	ENSGT00390000006287 #14	ENSGT00390000004067 #15	ENSGT00390000005742 #16	ENSGT00940000155841 #18	ENSGT00390000008565.a #19	ENSGT00390000013112 #20	ENSGT01060000248556.A.a.a.a #21	ENSGT00390000011500 #22	ENSGT00900000141021.b.a #23	ENSGT00390000004321	ENSGT00390000008371.b #24	ENSGT00390000006784 #25	ENSGT00940000161643	ENSGT00390000011980.b.b #26	ENSGT00950000182888.a.a.a.j.a #27	ENSGT00950000182888.a.a.a.j.b #28	ENSGT00390000009787 #29	ENSGT00940000158829 #30	ENSGT00950000183047.d #31	ENSGT00940000160451 #32	ENSGT00940000154645.B	ENSGT00940000162328	ENSGT00960000189405
Artiodactyla	ANCESTRAL SPECIES	7	ENSGT00940000161818	ENSGT00940000156902 #7	ENSGT00530000063187.A #8	ENSGT00940000158674 #9	ENSGT00940000160987 #10	ENSGT00390000016537 #11	ENSGT00940000158797 #12	ENSGT00940000154043.A #13	ENSGT00390000006287 #14	ENSGT00390000004067 #15	ENSGT00390000005742 #16	ENSGT00940000155841 #18	ENSGT00390000008565.a #19	ENSGT00390000013112 #20	ENSGT01060000248556.A.a.a.a #21	ENSGT00390000011500 #22	ENSGT00900000141021.b.a #23	ENSGT00390000004321	ENSGT00390000008371.b #24	ENSGT00390000006784 #25	ENSGT00940000161643	ENSGT00390000011980.b.b #26	ENSGT00950000182888.a.a.a.j.a #27	ENSGT00950000182888.a.a.a.j.b #28	ENSGT00390000009787 #29	ENSGT00940000158829 #30	ENSGT00950000183047.d #31	ENSGT00940000160451 #32	ENSGT00940000154645.B	ENSGT00940000162328	ENSGT00390000004524 #34
Artiodactyla_a	ANCESTRAL SPECIES	6	ENSGT00940000161818	ENSGT00940000156902 #7	ENSGT00530000063187.A #8	ENSGT00940000158674 #9	ENSGT00940000160987 #10	ENSGT00390000016537 #11	ENSGT00940000158797 #12	ENSGT00940000154043.A #13	ENSGT00390000006287 #14	ENSGT00390000004067 #15	ENSGT00390000005742 #16	ENSGT00940000155841 #18	ENSGT00390000008565.a #19	ENSGT00390000013112 #20	ENSGT01060000248556.A.a.a.a #21	ENSGT00390000011500 #22	ENSGT00900000141021.b.a #23	ENSGT00390000004321	ENSGT00390000008371.b #24	ENSGT00390000006784 #25	ENSGT00940000161643	ENSGT00390000011980.b.b #26	ENSGT00950000182888.a.a.a.j.a #27	ENSGT00950000182888.a.a.a.j.b #28	ENSGT00390000009787 #29	ENSGT00940000158829 #30	ENSGT00950000183047.d #31	ENSGT00940000160451 #32	ENSGT00940000154645.B	ENSGT00940000162328	ENSGT00390000004524 #34
Camelidae	ANCESTRAL SPECIES	5	ENSGT00940000156902 #7	ENSGT00940000161818	ENSGT00530000063187.A #8	ENSGT00940000158674 #9	ENSGT00940000160987 #10	ENSGT00390000016537 #11	ENSGT00940000158797 #12	ENSGT00940000154043.A #13	ENSGT00390000006287 #14	ENSGT00390000004067 #15	ENSGT00390000005742 #16	ENSGT00940000155841 #18	ENSGT00390000008565.a #19	ENSGT00390000013112 #20	ENSGT01060000248556.A.a.a.a #21	ENSGT00390000011500 #22	ENSGT00900000141021.b.a #23	ENSGT00390000004321	ENSGT00390000008371.b #24	ENSGT00390000006784 #25	ENSGT00940000161643	ENSGT00390000011980.b.b #26	ENSGT00950000182888.a.a.a.j.a #27	ENSGT00950000182888.a.a.a.j.b #28	ENSGT00390000009787 #29	ENSGT00940000158829 #30	ENSGT00950000183047.d #31	ENSGT00940000160451 #32	ENSGT00940000154645.B	ENSGT00940000162328	ENSGT00390000004524 #34
Arabian camel	MODERN SPECIES	30	PKN3 (ENSCDRG00005001760)	ZDHHC12 (ENSCDRG00005001723) #7	ZER1 (ENSCDRG00005001674) #8	TBC1D13 (ENSCDRG00005001632) #9	ENDOG (ENSCDRG00005001612) #10	SPOUT1 (ENSCDRG00005001575) #11	KYAT1 (ENSCDRG00005001537) #12	LRRC8A (ENSCDRG00005001521) #13	PHYHD1 (ENSCDRG00005001492) #14	DOLK (ENSCDRG00005001463) #15	NUP188 (ENSCDRG00005001373) #16	SH3GLB2 (ENSCDRG00005000966) #18	MIGA2 (ENSCDRG00005000850) #19	DOLPP1 (ENSCDRG00005000798) #20	CRAT (ENSCDRG00005000748) #21	PTPA (ENSCDRG00005000589) #22	IER5L (ENSCDRG00005000555) #23	C9orf50 (ENSCDRG00005000533)	NTMT1 (ENSCDRG00005000506) #24	ASB6 (ENSCDRG00005000474) #25	PRRX2 (ENSCDRG00005000450)	PTGES (ENSCDRG00005000446) #26	TOR1B (ENSCDRG00005000429) #27	TOR1A (ENSCDRG00005000415) #28	C9orf78 (ENSCDRG00005000393) #29	ENSCDRG00005000380	USP20 (ENSCDRG00005000329) #30	FNBP1 (ENSCDRG00005000106) #31	GPR107 (ENSCDRG00005000042) #32	NCS1 (ENSCDRG00005008430)	HMCN2 (ENSCDRG00005007546)
Alpaca	MODERN SPECIES	1743															DOLPP1 (ENSVPAG00000008042) #20	ENSVPAG00000008043 #22
Artiodactyla_b	ANCESTRAL SPECIES	7	ENSGT00940000161818	ENSGT00940000156902 #7	ENSGT00530000063187.A #8	ENSGT00940000158674 #9	ENSGT00940000160987 #10	ENSGT00390000016537 #11	ENSGT00940000158797 #12	ENSGT00940000154043.A #13	ENSGT00390000006287 #14	ENSGT00390000004067 #15	ENSGT00390000005742 #16	ENSGT00940000155841 #18	ENSGT00390000008565.a #19	ENSGT00390000013112 #20	ENSGT01060000248556.A.a.a.a #21	ENSGT00390000011500 #22	ENSGT00900000141021.b.a #23	ENSGT00390000004321	ENSGT00390000008371.b #24	ENSGT00390000006784 #25	ENSGT00940000161643	ENSGT00390000011980.b.b #26	ENSGT00950000182888.a.a.a.j.a #27	ENSGT00950000182888.a.a.a.j.b #28	ENSGT00390000009787 #29	ENSGT00940000158829 #30	ENSGT00950000183047.d #31	ENSGT00940000160451 #32	ENSGT00940000154645.B	ENSGT00940000162328	ENSGT00390000004524 #34
Pecora	ANCESTRAL SPECIES	5	ENSGT00940000161818	ENSGT00940000156902 #7	ENSGT00530000063187.A #8	ENSGT00940000158674 #9	ENSGT00940000160987 #10	ENSGT00390000016537 #11	ENSGT00940000158797 #12	ENSGT00940000154043.A #13	ENSGT00390000006287 #14	ENSGT00390000004067 #15	ENSGT00390000005742 #16	ENSGT00940000155841 #18	ENSGT00390000008565.a #19	ENSGT00390000013112 #20	ENSGT01060000248556.A.a.a.a #21	ENSGT00390000011500 #22	ENSGT00900000141021.b.a #23	ENSGT00390000004321	ENSGT00390000008371.b #24	ENSGT00390000006784 #25	ENSGT00940000161643	ENSGT00390000011980.b.b #26	ENSGT00950000182888.a.a.a.j.a #27	ENSGT00950000182888.a.a.a.j.b #28	ENSGT00390000009787 #29	ENSGT00940000158829 #30	ENSGT00950000183047.d #31	ENSGT00940000160451 #32	ENSGT00940000154645.B	ENSGT00940000162328	ENSGT00390000004524 #34
Percora_a	ANCESTRAL SPECIES	27	ENSGT00940000161818	ENSGT00940000156902 #7	ENSGT00530000063187.A #8	ENSGT00940000158674 #9	ENSGT00940000160987 #10	ENSGT00390000016537 #11	ENSGT00940000158797 #12	ENSGT00940000154043.A #13	ENSGT00390000006287 #14	ENSGT00390000004067 #15	ENSGT00390000005742 #16	ENSGT00940000155841 #18	ENSGT00390000008565.a #19	ENSGT00390000013112 #20	ENSGT01060000248556.A.a.a.a #21	ENSGT00390000011500 #22	ENSGT00900000141021.b.a #23	ENSGT00390000004321	ENSGT00390000008371.b #24	ENSGT00390000006784 #25	ENSGT00940000161643	ENSGT00390000011980.b.b #26	ENSGT00950000182888.a.a.a.j.a #27	ENSGT00950000182888.a.a.a.j.b #28	ENSGT00390000009787 #29	ENSGT00940000158829 #30	ENSGT00950000183047.d #31	ENSGT00940000160451 #32	ENSGT00940000154645.B	ENSGT00940000162328	ENSGT00390000004524 #34
Bovidae	ANCESTRAL SPECIES	5	ENSGT00940000161818	ENSGT00940000156902 #7	ENSGT00530000063187.A #8	ENSGT00940000158674 #9	ENSGT00940000160987 #10	ENSGT00390000016537 #11	ENSGT00940000158797 #12	ENSGT00940000154043.A #13	ENSGT00390000006287 #14	ENSGT00390000004067 #15	ENSGT00390000005742 #16	ENSGT00940000155841 #18	ENSGT00390000008565.a #19	ENSGT00390000013112 #20	ENSGT01060000248556.A.a.a.a #21	ENSGT00390000011500 #22	ENSGT00900000141021.b.a #23	ENSGT00390000004321	ENSGT00390000008371.b #24	ENSGT00390000006784 #25	ENSGT00940000161643	ENSGT00390000011980.b.b #26	ENSGT00950000182888.a.a.a.j.a #27	ENSGT00950000182888.a.a.a.j.b #28	ENSGT00390000009787 #29	ENSGT00940000158829 #30	ENSGT00950000183047.d #31	ENSGT00940000160451 #32	ENSGT00940000154645.B	ENSGT00940000162328	ENSGT00390000004524 #34
Caprinae	ANCESTRAL SPECIES	27	ENSGT00940000161818	ENSGT00940000156902 #7	ENSGT00530000063187.A #8	ENSGT00940000158674 #9	ENSGT00940000160987 #10	ENSGT00390000016537 #11	ENSGT00940000158797 #12	ENSGT00940000154043.A #13	ENSGT00390000006287 #14	ENSGT00390000004067 #15	ENSGT00390000005742 #16	ENSGT00940000155841 #18	ENSGT00390000008565.a #19	ENSGT00390000013112 #20	ENSGT01060000248556.A.a.a.a #21	ENSGT00390000011500 #22	ENSGT00900000141021.b.a #23	ENSGT00390000004321	ENSGT00390000008371.b #24	ENSGT00390000006784 #25	ENSGT00940000161643	ENSGT00390000011980.b.b #26	ENSGT00950000182888.a.a.a.j.a #27	ENSGT00950000182888.a.a.a.j.b #28	ENSGT00390000009787 #29	ENSGT00390000009272.d	ENSGT00940000158829 #30	ENSGT00950000183047.d #31	ENSGT00940000160451 #32	ENSGT00940000154645.B	ENSGT00940000162328
Rambouillet Sheep	MODERN SPECIES	19	ENDOG (ENSOARG00020003159) #10	SPOUT1 (ENSOARG00020003141) #11	ENSOARG00020003083 #12	ENSOARG00020003005 #12	ENSOARG00020002857 #12	ENSOARG00020002784 #12	LRRC8A (ENSOARG00020002765) #13	PHYHD1 (ENSOARG00020002721) #14	DOLK (ENSOARG00020002707) #15	NUP188 (ENSOARG00020002629) #16	SH3GLB2 (ENSOARG00020002386) #18	MIGA2 (ENSOARG00020002349) #19	DOLPP1 (ENSOARG00020002325) #20	CRAT (ENSOARG00020002283) #21	IER5L (ENSOARG00020002265) #23	PTPA (ENSOARG00020002160) #22	ENSOARG00020002124	NTMT1 (ENSOARG00020002110) #24	ASB6 (ENSOARG00020002047) #25	PRRX2 (ENSOARG00020002017)	PTGES (ENSOARG00020002004) #26	TOR1B (ENSOARG00020001999) #27	TOR1A (ENSOARG00020001959) #28	C9orf78 (ENSOARG00020001935) #29	USP20 (ENSOARG00020001868) #30	FNBP1 (ENSOARG00020001812) #31	GPR107 (ENSOARG00020001668) #32	NCS1 (ENSOARG00020001618)	HMCN2 (ENSOARG00020001432)	ASS1 (ENSOARG00020001391) #34	FUBP3 (ENSOARG00020001368) #35
Goat	MODERN SPECIES	2	PKN3 (ENSCHIG00000018757)	ZDHHC12 (ENSCHIG00000026386) #7	ZER1 (ENSCHIG00000024803) #8	TBC1D13 (ENSCHIG00000013669) #9	ENDOG (ENSCHIG00000020781) #10	SPOUT1 (ENSCHIG00000010025) #11	KYAT1 (ENSCHIG00000015959) #12	LRRC8A (ENSCHIG00000003097) #13	PHYHD1 (ENSCHIG00000025025) #14	DOLK (ENSCHIG00000013790) #15	NUP188 (ENSCHIG00000017195) #16	SH3GLB2 (ENSCHIG00000023738) #18	MIGA2 (ENSCHIG00000021488) #19	DOLPP1 (ENSCHIG00000022790) #20	CRAT (ENSCHIG00000016047) #21	PTPA (ENSCHIG00000018428) #22	IER5L (ENSCHIG00000007780) #23	NTMT1 (ENSCHIG00000008995) #24	ASB6 (ENSCHIG00000023406) #25	PRRX2 (ENSCHIG00000024682)	PTGES (ENSCHIG00000024614) #26	ENSCHIG00000012306	TOR1B (ENSCHIG00000015527) #27	TOR1A (ENSCHIG00000020435) #28	C9orf78 (ENSCHIG00000027025) #29	ENSCHIG00000024518	USP20 (ENSCHIG00000017589) #30	FNBP1 (ENSCHIG00000027203) #31	GPR107 (ENSCHIG00000022854) #32	NCS1 (ENSCHIG00000017219)	HMCN2 (ENSCHIG00000017573)
Bovinae	ANCESTRAL SPECIES	4	ENSGT00940000161818	ENSGT00940000156902 #7	ENSGT00530000063187.A #8	ENSGT00940000158674 #9	ENSGT00940000160987 #10	ENSGT00390000016537 #11	ENSGT00940000158797 #12	ENSGT00940000154043.A #13	ENSGT00390000006287 #14	ENSGT00390000004067 #15	ENSGT00390000005742 #16	ENSGT00940000155841 #18	ENSGT00390000008565.a #19	ENSGT00390000013112 #20	ENSGT01060000248556.A.a.a.a #21	ENSGT00390000011500 #22	ENSGT00900000141021.b.a #23	ENSGT00390000004321	ENSGT00390000008371.b #24	ENSGT00390000006784 #25	ENSGT00940000161643	ENSGT00390000011980.b.b #26	ENSGT00950000182888.a.a.a.j.a #27	ENSGT00950000182888.a.a.a.j.b #28	ENSGT00390000009787 #29	ENSGT00940000158829 #30	ENSGT00950000183047.d #31	ENSGT00940000160451 #32	ENSGT00940000154645.B	ENSGT00940000162328	ENSGT00390000004524 #34
Bos	ANCESTRAL SPECIES	5	ENSGT00940000161818	ENSGT00940000156902 #7	ENSGT00530000063187.A #8	ENSGT00940000158674 #9	ENSGT00940000160987 #10	ENSGT00390000016537 #11	ENSGT00940000158797 #12	ENSGT00940000154043.A #13	ENSGT00390000006287 #14	ENSGT00390000004067 #15	ENSGT00390000005742 #16	ENSGT00940000155841 #18	ENSGT00390000008565.a #19	ENSGT00390000013112 #20	ENSGT01060000248556.A.a.a.a #21	ENSGT00390000011500 #22	ENSGT00900000141021.b.a #23	ENSGT00390000004321	ENSGT00390000008371.b #24	ENSGT00390000006784 #25	ENSGT00940000161643	ENSGT00390000011980.b.b #26	ENSGT00950000182888.a.a.a.j.a #27	ENSGT00950000182888.a.a.a.j.b #28	ENSGT00390000009787 #29	ENSGT00940000158829 #30	ENSGT00950000183047.d #31	ENSGT00940000160451 #32	ENSGT00940000154645.B	ENSGT00940000162328	ENSGT00390000004524 #34
Bos_a	ANCESTRAL SPECIES	23	ENSGT00940000156902 #7	ENSGT00530000063187.A #8	ENSGT00940000158674 #9	ENSGT00940000160987 #10	ENSGT00390000016537 #11	ENSGT00960000192839.b	ENSGT00940000158797 #12	ENSGT00940000154043.A #13	ENSGT00390000006287 #14	ENSGT00390000004067 #15	ENSGT00390000005742 #16	ENSGT00940000155841 #18	ENSGT00390000008565.a #19	ENSGT00390000013112 #20	ENSGT01060000248556.A.a.a.a #21	ENSGT00390000011500 #22	ENSGT00900000141021.b.a #23	ENSGT00390000004321	ENSGT00390000008371.b #24	ENSGT00390000006784 #25	ENSGT00940000161643	ENSGT00390000011980.b.b #26	ENSGT00950000182888.a.a.a.j.a #27	ENSGT00950000182888.a.a.a.j.b #28	ENSGT00390000009787 #29	ENSGT00940000158829 #30	ENSGT00950000183047.d #31	ENSGT00940000160451 #32	ENSGT00940000163010 #33	ENSGT00940000162328	ENSGT00390000004524 #34
Wild yak	MODERN SPECIES	2293								LRRC8A (ENSBMUG00000000716) #13	PHYHD1 (ENSBMUG00000000812) #14	DOLK (ENSBMUG00000000836) #15	NUP188 (ENSBMUG00000000866) #16	SH3GLB2 (ENSBMUG00000000898) #18	MIGA2 (ENSBMUG00000000929) #19	DOLPP1 (ENSBMUG00000000945) #20	CRAT (ENSBMUG00000000992) #21	PTPA (ENSBMUG00000001090) #22	ENSBMUG00000001148 #23	C9orf50 (ENSBMUG00000001159)	NTMT1 (ENSBMUG00000001171) #24	ASB6 (ENSBMUG00000001201) #25	PRRX2 (ENSBMUG00000001222)	PTGES (ENSBMUG00000001227) #26	TOR1B (ENSBMUG00000001237) #27	TOR1A (ENSBMUG00000001248) #28	C9orf78 (ENSBMUG00000001254) #29	ENSBMUG00000001269	USP20 (ENSBMUG00000001290) #30	FNBP1 (ENSBMUG00000001477) #31	GPR107 (ENSBMUG00000001590) #32	ENSBMUG00000001719 #33	HMCN2 (ENSBMUG00000001835)
Domestic yak	MODERN SPECIES	28	TBC1D13 (ENSBGRG00000014747) #9	ENDOG (ENSBGRG00000015041) #10	SPOUT1 (ENSBGRG00000015119) #11	KYAT1 (ENSBGRG00000015519) #12	ENSBGRG00000015866	ENSBGRG00000015915	LRRC8A (ENSBGRG00000015966) #13	PHYHD1 (ENSBGRG00000016017) #14	DOLK (ENSBGRG00000016243) #15	NUP188 (ENSBGRG00000016320) #16	SH3GLB2 (ENSBGRG00000016771) #18	ENSBGRG00000017158	MIGA2 (ENSBGRG00000017203) #19	DOLPP1 (ENSBGRG00000017351) #20	CRAT (ENSBGRG00000017531) #21	PTPA (ENSBGRG00000017696) #22	IER5L (ENSBGRG00000018629) #23	ENSBGRG00000018655	NTMT1 (ENSBGRG00000018724) #24	ASB6 (ENSBGRG00000018789) #25	PRRX2 (ENSBGRG00000019047)	PTGES (ENSBGRG00000019070) #26	TOR1B (ENSBGRG00000019140) #27	TOR1A (ENSBGRG00000019204) #28	C9orf78 (ENSBGRG00000019238) #29	USP20 (ENSBGRG00000006274) #30	ENSBGRG00000006503	FNBP1 (ENSBGRG00000006540) #31	GPR107 (ENSBGRG00000006768) #32	ENSBGRG00000007065 #33	ASS1 (ENSBGRG00000008323) #34
Bos_b	ANCESTRAL SPECIES	16	ENSGT00940000161818	ENSGT00940000156902 #7	ENSGT00530000063187.A #8	ENSGT00940000158674 #9	ENSGT00940000160987 #10	ENSGT00390000016537 #11	ENSGT00940000158797 #12	ENSGT00940000154043.A #13	ENSGT00390000006287 #14	ENSGT00390000004067 #15	ENSGT00390000005742 #16	ENSGT00940000155841 #18	ENSGT00390000008565.a #19	ENSGT00390000013112 #20	ENSGT01060000248556.A.a.a.a #21	ENSGT00390000011500 #22	ENSGT00900000141021.b.a #23	ENSGT00390000004321	ENSGT00390000008371.b #24	ENSGT00390000006784 #25	ENSGT00940000161643	ENSGT00390000011980.b.b #26	ENSGT00950000182888.a.a.a.j.a #27	ENSGT00950000182888.a.a.a.j.b #28	ENSGT00390000009787 #29	ENSGT00940000158829 #30	ENSGT00950000183047.d #31	ENSGT00940000160451 #32	ENSGT00940000154645.B	ENSGT00940000162328	ENSGT00390000004524 #34
Cow	MODERN SPECIES	2	ZDHHC12 (ENSBTAG00000030540) #7	ZER1 (ENSBTAG00000010208) #8	TBC1D13 (ENSBTAG00000012480) #9	ENDOG (ENSBTAG00000012484) #10	SPOUT1 (ENSBTAG00000012485) #11	KYAT1 (ENSBTAG00000036101) #12	ENSBTAG00000036099 #12	LRRC8A (ENSBTAG00000013030) #13	PHYHD1 (ENSBTAG00000038831) #14	DOLK (ENSBTAG00000010601) #15	NUP188 (ENSBTAG00000010613) #16	SH3GLB2 (ENSBTAG00000010626) #18	MIGA2 (ENSBTAG00000010653) #19	DOLPP1 (ENSBTAG00000017922) #20	CRAT (ENSBTAG00000001932) #21	PTPA (ENSBTAG00000001933) #22	IER5L (ENSBTAG00000030521) #23	C11H9orf50 (ENSBTAG00000019513)	NTMT1 (ENSBTAG00000015437) #24	ASB6 (ENSBTAG00000008973) #25	PRRX2 (ENSBTAG00000002936)	PTGES (ENSBTAG00000019453) #26	TOR1B (ENSBTAG00000002837) #27	TOR1A (ENSBTAG00000020305) #28	C11H9orf78 (ENSBTAG00000020307) #29	USP20 (ENSBTAG00000020311) #30	FNBP1 (ENSBTAG00000020313) #31	GPR107 (ENSBTAG00000004204) #32	NCS1 (ENSBTAG00000008726)	HMCN2 (ENSBTAG00000002319)	ASS1 (ENSBTAG00000020747) #34
Hybrid Bos Indicus	MODERN SPECIES	2	ZER1 (ENSBIXG00005007117) #8	TBC1D13 (ENSBIXG00005001821) #9	ENDOG (ENSBIXG00005014033) #10	SPOUT1 (ENSBIXG00005014021) #11	ENSBIXG00005013976 #12	ENSBIXG00005013947 #12	LRRC8A (ENSBIXG00005001742) #13	PHYHD1 (ENSBIXG00005013866) #14	DOLK (ENSBIXG00005013832) #15	NUP188 (ENSBIXG00005013805) #16	SH3GLB2 (ENSBIXG00005013756) #18	MIGA2 (ENSBIXG00005013669) #19	CRAT (ENSBIXG00005013617) #21	ENSBIXG00005001649	DOLPP1 (ENSBIXG00005013539) #20	PTPA (ENSBIXG00005013492) #22	C9orf50 (ENSBIXG00005013399)	NTMT1 (ENSBIXG00005001602) #24	ASB6 (ENSBIXG00005013359) #25	PRRX2 (ENSBIXG00005013316)	PTGES (ENSBIXG00005013306) #26	TOR1B (ENSBIXG00005013295) #27	TOR1A (ENSBIXG00005006429) #28	C9orf78 (ENSBIXG00005013272) #29	USP20 (ENSBIXG00005013251) #30	ENSBIXG00005013221	FNBP1 (ENSBIXG00005013167) #31	GPR107 (ENSBIXG00005012991) #32	NCS1 (ENSBIXG00005012934)	HMCN2 (ENSBIXG00005012879)	ASS1 (ENSBIXG00005012814) #34
American bison	MODERN SPECIES	3289	PKN3 (ENSBBBG00000023895)	ZDHHC12 (ENSBBBG00000023918) #7	ZER1 (ENSBBBG00000008636) #8	TBC1D13 (ENSBBBG00000008976) #9	ENDOG (ENSBBBG00000024001) #10	ENSBBBG00000024012 #11	KYAT1 (ENSBBBG00000024044) #12	LRRC8A (ENSBBBG00000024057) #13	PHYHD1 (ENSBBBG00000024125) #14	DOLK (ENSBBBG00000024142) #15	NUP188 (ENSBBBG00000024205) #16	SH3GLB2 (ENSBBBG00000006349) #18	MIGA2 (ENSBBBG00000024426) #19	DOLPP1 (ENSBBBG00000024469) #20	CRAT (ENSBBBG00000009013) #21	PTPA (ENSBBBG00000006472) #22	ENSBBBG00000007715 #23	ENSBBBG00000006483	ENSBBBG00000024718 #24	ASB6 (ENSBBBG00000024779) #25	PRRX2 (ENSBBBG00000024797)	PTGES (ENSBBBG00000006527) #26	TOR1B (ENSBBBG00000024827) #27	TOR1A (ENSBBBG00000006539) #28	C9orf78 (ENSBBBG00000006821) #29	USP20 (ENSBBBG00000024987) #30	FNBP1 (ENSBBBG00000025211) #31	GPR107 (ENSBBBG00000025414) #32	NCS1 (ENSBBBG00000025501)	HMCN2 (ENSBBBG00000007921)	ASS1 (ENSBBBG00000009513) #34
Siberian musk deer	MODERN SPECIES	1178	ENSMMSG00000022721	PKN3 (ENSMMSG00000022736)	ZDHHC12 (ENSMMSG00000004629) #7	ZER1 (ENSMMSG00000004684) #8	TBC1D13 (ENSMMSG00000004774) #9	ENDOG (ENSMMSG00000004878) #10	SPOUT1 (ENSMMSG00000004947) #11	KYAT1 (ENSMMSG00000005035) #12	LRRC8A (ENSMMSG00000005081) #13	NUP188 (ENSMMSG00000005172) #16	DOLK (ENSMMSG00000005645) #15	SH3GLB2 (ENSMMSG00000005680) #18	MIGA2 (ENSMMSG00000005812) #19	DOLPP1 (ENSMMSG00000005885) #20	CRAT (ENSMMSG00000005945) #21	PTPA (ENSMMSG00000006019) #22	IER5L (ENSMMSG00000006145) #23	ENSMMSG00000006154	NTMT1 (ENSMMSG00000006173) #24	ASB6 (ENSMMSG00000006212) #25	PRRX2 (ENSMMSG00000006283)	PTGES (ENSMMSG00000006301) #26	TOR1B (ENSMMSG00000006315) #27	TOR1A (ENSMMSG00000006335) #28	ENSMMSG00000006362 #29	USP20 (ENSMMSG00000006424) #30	FNBP1 (ENSMMSG00000006573) #31	GPR107 (ENSMMSG00000006768) #32	NCS1 (ENSMMSG00000006889)	HMCN2 (ENSMMSG00000006970)	ASS1 (ENSMMSG00000007477) #34
Yarkand deer	MODERN SPECIES	2	ZDHHC12 (ENSCHYG00000010984) #7	ZER1 (ENSCHYG00000011062) #8	TBC1D13 (ENSCHYG00000011188) #9	ENDOG (ENSCHYG00000011462) #10	SPOUT1 (ENSCHYG00000011505) #11	KYAT1 (ENSCHYG00000011630) #12	LRRC8A (ENSCHYG00000011822) #13	PHYHD1 (ENSCHYG00000011859) #14	DOLK (ENSCHYG00000012107) #15	NUP188 (ENSCHYG00000012137) #16	SH3GLB2 (ENSCHYG00000012467) #18	MIGA2 (ENSCHYG00000012701) #19	ENSCHYG00000012923	DOLPP1 (ENSCHYG00000012953) #20	CRAT (ENSCHYG00000013075) #21	PTPA (ENSCHYG00000013480) #22	ENSCHYG00000013946 #23	ENSCHYG00000013989	NTMT1 (ENSCHYG00000014079) #24	ASB6 (ENSCHYG00000014174) #25	PRRX2 (ENSCHYG00000014462)	PTGES (ENSCHYG00000014522) #26	TOR1B (ENSCHYG00000014590) #27	TOR1A (ENSCHYG00000014636) #28	C9orf78 (ENSCHYG00000014673) #29	USP20 (ENSCHYG00000014904) #30	FNBP1 (ENSCHYG00000015180) #31	GPR107 (ENSCHYG00000017510) #32	ENSCHYG00000018457 #33	HMCN2 (ENSCHYG00000018642)	ASS1 (ENSCHYG00000019066) #34
Cetacea	ANCESTRAL SPECIES	9	ENSGT00940000161818	ENSGT00940000156902 #7	ENSGT00530000063187.A #8	ENSGT00940000158674 #9	ENSGT00940000160987 #10	ENSGT00390000016537 #11	ENSGT00940000158797 #12	ENSGT00940000154043.A #13	ENSGT00390000006287 #14	ENSGT00390000004067 #15	ENSGT00390000005742 #16	ENSGT00940000155841 #18	ENSGT00390000008565.a #19	ENSGT00390000013112 #20	ENSGT01060000248556.A.a.a.a #21	ENSGT00390000011500 #22	ENSGT00900000141021.b.a #23	ENSGT00390000008371.b #24	ENSGT00390000006784 #25	ENSGT00940000161643	ENSGT00390000011980.b.b #26	ENSGT00950000182888.a.a.a.j.a #27	ENSGT00950000182888.a.a.a.j.b #28	ENSGT00390000009787 #29	ENSGT00940000158829 #30	ENSGT00950000183047.d #31	ENSGT00940000160451 #32	ENSGT00940000154645.B	ENSGT00940000162328	ENSGT00390000004524 #34	ENSGT00940000156744 #35
Blue whale	MODERN SPECIES	17	PKN3 (ENSBMSG00010017783)	ZDHHC12 (ENSBMSG00010017813) #7	ZER1 (ENSBMSG00010017848) #8	TBC1D13 (ENSBMSG00010017884) #9	ENDOG (ENSBMSG00010017915) #10	SPOUT1 (ENSBMSG00010017933) #11	KYAT1 (ENSBMSG00010017962) #12	LRRC8A (ENSBMSG00010018009) #13	PHYHD1 (ENSBMSG00010018043) #14	DOLK (ENSBMSG00010018209) #15	NUP188 (ENSBMSG00010018236) #16	SH3GLB2 (ENSBMSG00010018286) #18	MIGA2 (ENSBMSG00010018398) #19	DOLPP1 (ENSBMSG00010018436) #20	CRAT (ENSBMSG00010018484) #21	PTPA (ENSBMSG00010018546) #22	NTMT1 (ENSBMSG00010018666) #24	ASB6 (ENSBMSG00010018696) #25	PRRX2 (ENSBMSG00010018742)	PTGES (ENSBMSG00010018766) #26	ENSBMSG00010018780	ENSBMSG00010018792 #27	TOR1A (ENSBMSG00010018817) #28	C9orf78 (ENSBMSG00010018839) #29	USP20 (ENSBMSG00010018877) #30	FNBP1 (ENSBMSG00010018996) #31	GPR107 (ENSBMSG00010019745) #32	NCS1 (ENSBMSG00010019809)	HMCN2 (ENSBMSG00010019864)	ASS1 (ENSBMSG00010020073) #34	FUBP3 (ENSBMSG00010020125) #35
Odontoceti	ANCESTRAL SPECIES	8	ENSGT00940000161818	ENSGT00940000156902 #7	ENSGT00530000063187.A #8	ENSGT00940000158674 #9	ENSGT00940000160987 #10	ENSGT00390000016537 #11	ENSGT00940000158797 #12	ENSGT00940000154043.A #13	ENSGT00390000006287 #14	ENSGT00390000004067 #15	ENSGT00390000005742 #16	ENSGT00940000155841 #18	ENSGT00390000008565.a #19	ENSGT00390000013112 #20	ENSGT01060000248556.A.a.a.a #21	ENSGT00390000011500 #22	ENSGT00900000141021.b.a #23	ENSGT00390000008371.b #24	ENSGT00390000006784 #25	ENSGT00940000161643	ENSGT00390000011980.b.b #26	ENSGT00950000182888.a.a.a.j.a #27	ENSGT00950000182888.a.a.a.j.b #28	ENSGT00390000009787 #29	ENSGT00940000158829 #30	ENSGT00950000183047.d #31	ENSGT00940000160451 #32	ENSGT00940000154645.B	ENSGT00940000162328	ENSGT00390000004524 #34	ENSGT00940000156744 #35
Odontoceti_a	ANCESTRAL SPECIES	19	ENSGT00940000161818	ENSGT00940000156902 #7	ENSGT00530000063187.A #8	ENSGT00940000158674 #9	ENSGT00940000160987 #10	ENSGT00390000016537 #11	ENSGT00940000158797 #12	ENSGT00940000154043.A #13	ENSGT00390000006287 #14	ENSGT00390000004067 #15	ENSGT00390000005742 #16	ENSGT00940000155841 #18	ENSGT00390000008565.a #19	ENSGT00390000013112 #20	ENSGT01060000248556.A.a.a.a #21	ENSGT00390000011500 #22	ENSGT00900000141021.b.a #23	ENSGT00390000004321	ENSGT00390000008371.b #24	ENSGT00390000006784 #25	ENSGT00940000161643	ENSGT00390000011980.b.b #26	ENSGT00950000182888.a.a.a.j.a #27	ENSGT00950000182888.a.a.a.j.b #28	ENSGT00390000009787 #29	ENSGT00940000158829 #30	ENSGT00950000183047.d #31	ENSGT00940000160451 #32	ENSGT00940000154645.B	ENSGT00940000162328	ENSGT00390000004524 #34
Dolphin	MODERN SPECIES	6872																PTPA (ENSTTRG00000013575) #22
Odontoceti_b	ANCESTRAL SPECIES	8	ENSGT00940000161818	ENSGT00940000156902 #7	ENSGT00530000063187.A #8	ENSGT00940000158674 #9	ENSGT00940000160987 #10	ENSGT00390000016537 #11	ENSGT00940000158797 #12	ENSGT00940000154043.A #13	ENSGT00390000006287 #14	ENSGT00390000004067 #15	ENSGT00390000005742 #16	ENSGT00940000155841 #18	ENSGT00390000008565.a #19	ENSGT00390000013112 #20	ENSGT01060000248556.A.a.a.a #21	ENSGT00390000011500 #22	ENSGT00900000141021.b.a #23	ENSGT00390000008371.b #24	ENSGT00390000006784 #25	ENSGT00940000161643	ENSGT00390000011980.b.b #26	ENSGT00950000182888.a.a.a.j.a #27	ENSGT00950000182888.a.a.a.j.b #28	ENSGT00390000009787 #29	ENSGT00940000158829 #30	ENSGT00950000183047.d #31	ENSGT00940000160451 #32	ENSGT00940000154645.B	ENSGT00940000162328	ENSGT00390000004524 #34	ENSGT00940000156744 #35
Monodontidae	ANCESTRAL SPECIES	5	ENSGT00940000161818	ENSGT00940000156902 #7	ENSGT00530000063187.A #8	ENSGT00940000158674 #9	ENSGT00940000160987 #10	ENSGT00390000016537 #11	ENSGT00940000158797 #12	ENSGT00940000154043.A #13	ENSGT00390000006287 #14	ENSGT00390000004067 #15	ENSGT00390000005742 #16	ENSGT00940000155841 #18	ENSGT00390000008565.a #19	ENSGT00390000013112 #20	ENSGT01060000248556.A.a.a.a #21	ENSGT00390000011500 #22	ENSGT00900000141021.b.a #23	ENSGT00390000008371.b #24	ENSGT00390000006784 #25	ENSGT00940000161643	ENSGT00390000011980.b.b #26	ENSGT00950000182888.a.a.a.j.a #27	ENSGT00950000182888.a.a.a.j.b #28	ENSGT00390000009787 #29	ENSGT00940000158829 #30	ENSGT00950000183047.d #31	ENSGT00940000160451 #32	ENSGT00940000154645.B	ENSGT00390000008195.c	ENSGT00940000162328	ENSGT00390000004524 #34
Beluga whale	MODERN SPECIES	19	ZDHHC12 (ENSDLEG00000010316) #7	ZER1 (ENSDLEG00000010294) #8	TBC1D13 (ENSDLEG00000010257) #9	ENDOG (ENSDLEG00000010240) #10	SPOUT1 (ENSDLEG00000010049) #11	KYAT1 (ENSDLEG00000009805) #12	LRRC8A (ENSDLEG00000009771) #13	PHYHD1 (ENSDLEG00000009397) #14	DOLK (ENSDLEG00000009354) #15	ENSDLEG00000009341 #16	NUP188 (ENSDLEG00000009305) #16	SH3GLB2 (ENSDLEG00000009248) #18	MIGA2 (ENSDLEG00000008905) #19	DOLPP1 (ENSDLEG00000008739) #20	CRAT (ENSDLEG00000008696) #21	PTPA (ENSDLEG00000008669) #22	IER5L (ENSDLEG00000008658) #23	NTMT1 (ENSDLEG00000008638) #24	ASB6 (ENSDLEG00000008611) #25	PRRX2 (ENSDLEG00000008586)	PTGES (ENSDLEG00000008564) #26	TOR1B (ENSDLEG00000008537) #27	TOR1A (ENSDLEG00000008413) #28	C9orf78 (ENSDLEG00000008371) #29	ENSDLEG00000008329	USP20 (ENSDLEG00000006766) #30	FNBP1 (ENSDLEG00000006640) #31	GPR107 (ENSDLEG00000006525) #32	ENSDLEG00000006497	ENSDLEG00000006488	HMCN2 (ENSDLEG00000006312)
Narwhal	MODERN SPECIES	312	PKN3 (ENSMMNG00015012862)	ZDHHC12 (ENSMMNG00015012907) #7	ZER1 (ENSMMNG00015012922) #8	TBC1D13 (ENSMMNG00015012949) #9	ENDOG (ENSMMNG00015012965) #10	SPOUT1 (ENSMMNG00015012974) #11	KYAT1 (ENSMMNG00015013000) #12	LRRC8A (ENSMMNG00015013024) #13	PHYHD1 (ENSMMNG00015013052) #14	DOLK (ENSMMNG00015013067) #15	NUP188 (ENSMMNG00015013093) #16	SH3GLB2 (ENSMMNG00015013170) #18	MIGA2 (ENSMMNG00015013206) #19	DOLPP1 (ENSMMNG00015013232) #20	CRAT (ENSMMNG00015013262) #21	PTPA (ENSMMNG00015013319) #22	IER5L (ENSMMNG00015013356) #23	NTMT1 (ENSMMNG00015013386) #24	ASB6 (ENSMMNG00015013409) #25	PRRX2 (ENSMMNG00015013430)	PTGES (ENSMMNG00015013439) #26	TOR1B (ENSMMNG00015013447) #27	TOR1A (ENSMMNG00015013457) #28	C9orf78 (ENSMMNG00015013471) #29	USP20 (ENSMMNG00015013546) #30	FNBP1 (ENSMMNG00015013587) #31	GPR107 (ENSMMNG00015013685) #32	NCS1 (ENSMMNG00015013771)	ADI1 (ENSMMNG00015013790)	HMCN2 (ENSMMNG00015013821)	ASS1 (ENSMMNG00015013868) #34
Vaquita	MODERN SPECIES	17	PKN3 (ENSPSNG00000016019)	ZDHHC12 (ENSPSNG00000015940) #7	ZER1 (ENSPSNG00000015866) #8	TBC1D13 (ENSPSNG00000015769) #9	ENDOG (ENSPSNG00000015699) #10	SPOUT1 (ENSPSNG00000015652) #11	KYAT1 (ENSPSNG00000015552) #12	LRRC8A (ENSPSNG00000015488) #13	PHYHD1 (ENSPSNG00000015374) #14	DOLK (ENSPSNG00000015343) #15	NUP188 (ENSPSNG00000015265) #16	SH3GLB2 (ENSPSNG00000015075) #18	MIGA2 (ENSPSNG00000014951) #19	DOLPP1 (ENSPSNG00000014843) #20	CRAT (ENSPSNG00000014741) #21	PTPA (ENSPSNG00000014434) #22	IER5L (ENSPSNG00000014381) #23	NTMT1 (ENSPSNG00000014051) #24	ASB6 (ENSPSNG00000013921) #25	PRRX2 (ENSPSNG00000013844)	ENSPSNG00000013801	PTGES (ENSPSNG00000013757) #26	TOR1B (ENSPSNG00000013681) #27	TOR1A (ENSPSNG00000013609) #28	ENSPSNG00000013547	USP20 (ENSPSNG00000013440) #30	ENSPSNG00000013402	FNBP1 (ENSPSNG00000013220) #31	GPR107 (ENSPSNG00000013082) #32	ENSPSNG00000013006	NCS1 (ENSPSNG00000012964)
Sperm whale	DUPLICATION
Sperm whale	MODERN SPECIES	4	ABL1 (ENSPCTG00005008970)	EXOSC2 (ENSPCTG00005009139) #37	PRDM12 (ENSPCTG00005009360) #36	FUBP3 (ENSPCTG00005009513) #35	ENSPCTG00005009553 #34	HMCN2 (ENSPCTG00005009610)	NCS1 (ENSPCTG00005010505) #33	GPR107 (ENSPCTG00005010615) #32	FNBP1 (ENSPCTG00005010933) #31	ENSPCTG00005011187 #30	C13H9orf78 (ENSPCTG00005011213) #29	TOR1A (ENSPCTG00005011264) #28	TOR1B (ENSPCTG00005011290) #27	PTGES (ENSPCTG00005011319) #26	PRRX2 (ENSPCTG00005011351)	ENSPCTG00005011413 #22	IER5L (ENSPCTG00005011454) #23	ENSPCTG00005011466 #18	NUP188 (ENSPCTG00005011563) #16	DOLK (ENSPCTG00005011997) #15	PHYHD1 (ENSPCTG00005012022) #14	LRRC8A (ENSPCTG00005012078) #13	KYAT1 (ENSPCTG00005012112) #12	SPOUT1 (ENSPCTG00005012201) #11	ENDOG (ENSPCTG00005012355) #10	TBC1D13 (ENSPCTG00005012385) #9	ZER1 (ENSPCTG00005012475) #8	ZDHHC12 (ENSPCTG00005012644) #7	PKN3 (ENSPCTG00005012722)	ENSPCTG00005012830	DYNC2I2 (ENSPCTG00005013123)
Sperm whale	MODERN SPECIES	153												ENSPCTG00005020514 #18	MIGA2 (ENSPCTG00005020489) #19	DOLPP1 (ENSPCTG00005020446) #20	CRAT (ENSPCTG00005020380) #21	ENSPCTG00005020282 #22
Suina	ANCESTRAL SPECIES	37	ENSGT00940000161818	ENSGT00940000156902 #7	ENSGT00530000063187.A #8	ENSGT00940000158674 #9	ENSGT00940000160987 #10	ENSGT00390000016537 #11	ENSGT00940000158797 #12	ENSGT00940000154043.A #13	ENSGT00390000006287 #14	ENSGT00390000004067 #15	ENSGT00390000005742 #16	ENSGT00940000155841 #18	ENSGT00390000008565.a #19	ENSGT00390000013112 #20	ENSGT01060000248556.A.a.a.a #21	ENSGT00390000011500 #22	ENSGT00900000141021.b.a #23	ENSGT00390000008371.b #24	ENSGT00390000006784 #25	ENSGT00940000161643	ENSGT00390000011980.b.b #26	ENSGT00950000182888.a.a.a.j.a #27	ENSGT00950000182888.a.a.a.j.b #28	ENSGT00390000009787 #29	ENSGT00940000158829 #30	ENSGT00950000183047.d #31	ENSGT00940000160451 #32	ENSGT00940000154645.B	ENSGT00940000162328	ENSGT00390000004524 #34	ENSGT00940000156744 #35
Chacoan peccary	MODERN SPECIES	887	PKN3 (ENSCWAG00000010948)	ZDHHC12 (ENSCWAG00000010885) #7	ZER1 (ENSCWAG00000010856) #8	TBC1D13 (ENSCWAG00000010779) #9	ENDOG (ENSCWAG00000010746) #10	SPOUT1 (ENSCWAG00000010709) #11	KYAT1 (ENSCWAG00000010560) #12	LRRC8A (ENSCWAG00000010522) #13	PHYHD1 (ENSCWAG00000010444) #14	DOLK (ENSCWAG00000010424) #15	NUP188 (ENSCWAG00000010345) #16	SH3GLB2 (ENSCWAG00000010090) #18	MIGA2 (ENSCWAG00000010018) #19	DOLPP1 (ENSCWAG00000009948) #20	CRAT (ENSCWAG00000009778) #21	PTPA (ENSCWAG00000009497) #22	IER5L (ENSCWAG00000009460) #23	NTMT1 (ENSCWAG00000009246) #24	ASB6 (ENSCWAG00000009110) #25	PRRX2 (ENSCWAG00000009077)	PTGES (ENSCWAG00000009041) #26	TOR1B (ENSCWAG00000009005) #27	TOR1A (ENSCWAG00000008965) #28	C9orf78 (ENSCWAG00000008931) #29	USP20 (ENSCWAG00000008895) #30	FNBP1 (ENSCWAG00000008670) #31	GPR107 (ENSCWAG00000008440) #32	NCS1 (ENSCWAG00000008387)	HMCN2 (ENSCWAG00000007654)	ASS1 (ENSCWAG00000007572) #34	ENSCWAG00000007549
Pig	MODERN SPECIES		PKN3 (ENSSSCG00000005657)	ZDHHC12 (ENSSSCG00000063201) #7	ZER1 (ENSSSCG00000005659) #8	TBC1D13 (ENSSSCG00000005660) #9	ENDOG (ENSSSCG00000005661) #10	SPOUT1 (ENSSSCG00000005662) #11	KYAT1 (ENSSSCG00000005663) #12	LRRC8A (ENSSSCG00000005664) #13	PHYHD1 (ENSSSCG00000005665) #14	DOLK (ENSSSCG00000005666) #15	NUP188 (ENSSSCG00000005667) #16	SH3GLB2 (ENSSSCG00000005668) #18	MIGA2 (ENSSSCG00000005669) #19	DOLPP1 (ENSSSCG00000031669) #20	CRAT (ENSSSCG00000005671) #21	PTPA (ENSSSCG00000005672) #22	IER5L (ENSSSCG00000005673) #23	NTMT1 (ENSSSCG00000005678) #24	ASB6 (ENSSSCG00000005679) #25	PRRX2 (ENSSSCG00000005680)	PTGES (ENSSSCG00000005688) #26	TOR1B (ENSSSCG00000005683) #27	TOR1A (ENSSSCG00000034518) #28	C9orf78 (ENSSSCG00000030426) #29	USP20 (ENSSSCG00000024341) #30	FNBP1 (ENSSSCG00000005689) #31	GPR107 (ENSSSCG00000038868) #32	NCS1 (ENSSSCG00000039311)	HMCN2 (ENSSSCG00000005699)	ASS1 (ENSSSCG00000005701) #34	FUBP3 (ENSSSCG00000005702) #35
Laurasiatheria_b	ANCESTRAL SPECIES	11	ENSGT00940000161818	ENSGT00940000156902 #7	ENSGT00530000063187.A #8	ENSGT00940000158674 #9	ENSGT00940000160987 #10	ENSGT00390000016537 #11	ENSGT00940000158797 #12	ENSGT00940000154043.A #13	ENSGT00390000006287 #14	ENSGT00390000004067 #15	ENSGT00390000005742 #16	ENSGT00940000155841 #18	ENSGT00390000008565.a #19	ENSGT00390000013112 #20	ENSGT01060000248556.A.a.a.a #21	ENSGT00390000011500 #22	ENSGT00900000141021.b.a #23	ENSGT00390000004321	ENSGT00390000008371.b #24	ENSGT00390000006784 #25	ENSGT00940000161643	ENSGT00390000011980.b.b #26	ENSGT00950000182888.a.a.a.j.a #27	ENSGT00950000182888.a.a.a.j.b #28	ENSGT00390000009787 #29	ENSGT00940000158829 #30	ENSGT00950000183047.d #31	ENSGT00940000160451 #32	ENSGT00940000163010 #33	ENSGT00940000162328	ENSGT00960000189405
Laurasiatheria_c	ANCESTRAL SPECIES	11	ENSGT00940000161818	ENSGT00940000156902 #7	ENSGT00530000063187.A #8	ENSGT00940000158674 #9	ENSGT00940000160987 #10	ENSGT00390000016537 #11	ENSGT00940000158797 #12	ENSGT00940000154043.A #13	ENSGT00390000006287 #14	ENSGT00390000004067 #15	ENSGT00390000005742 #16	ENSGT00940000155841 #18	ENSGT00390000008565.a #19	ENSGT00390000013112 #20	ENSGT01060000248556.A.a.a.a #21	ENSGT00390000011500 #22	ENSGT00900000141021.b.a #23	ENSGT00390000004321	ENSGT00390000008371.b #24	ENSGT00390000006784 #25	ENSGT00940000161643	ENSGT00390000011980.b.b #26	ENSGT00950000182888.a.a.a.j.a #27	ENSGT00950000182888.a.a.a.j.b #28	ENSGT00390000009787 #29	ENSGT00940000158829 #30	ENSGT00950000183047.d #31	ENSGT00940000160451 #32	ENSGT00940000154645.B	ENSGT00940000162328	ENSGT00390000004524 #34
Equus	ANCESTRAL SPECIES	30	ENSGT00940000161818	ENSGT00940000156902 #7	ENSGT00530000063187.A #8	ENSGT00940000158674 #9	ENSGT00940000160987 #10	ENSGT00390000016537 #11	ENSGT00940000158797 #12	ENSGT00940000154043.A #13	ENSGT00390000006287 #14	ENSGT00390000004067 #15	ENSGT00390000005742 #16	ENSGT00940000155841 #18	ENSGT00390000008565.a #19	ENSGT00390000013112 #20	ENSGT01060000248556.A.a.a.a #21	ENSGT00390000011500 #22	ENSGT00900000141021.b.a #23	ENSGT00390000004321	ENSGT00390000008371.b #24	ENSGT00390000006784 #25	ENSGT00940000161643	ENSGT00390000011980.b.b #26	ENSGT00950000182888.a.a.a.j.a #27	ENSGT00950000182888.a.a.a.j.b #28	ENSGT00390000009787 #29	ENSGT00940000158829 #30	ENSGT00950000183047.d #31	ENSGT00940000160451 #32	ENSGT00940000154645.B	ENSGT00940000162328	ENSGT00390000004524 #34
Horse	MODERN SPECIES	17	SET (ENSECAG00000009117)	PKN3 (ENSECAG00000017351)	ZDHHC12 (ENSECAG00000012555) #7	ZER1 (ENSECAG00000015821) #8	TBC1D13 (ENSECAG00000007916) #9	ENDOG (ENSECAG00000009809) #10	SPOUT1 (ENSECAG00000010177) #11	KYAT1 (ENSECAG00000022067) #12	LRRC8A (ENSECAG00000013359) #13	DOLK (ENSECAG00000051192) #15	NUP188 (ENSECAG00000006134) #16	SH3GLB2 (ENSECAG00000004437) #18	MIGA2 (ENSECAG00000018283) #19	DOLPP1 (ENSECAG00000000463) #20	CRAT (ENSECAG00000010205) #21	PTPA (ENSECAG00000007349) #22	IER5L (ENSECAG00000035317) #23	C9orf50 (ENSECAG00000015026)	NTMT1 (ENSECAG00000015033) #24	ASB6 (ENSECAG00000018213) #25	PRRX2 (ENSECAG00000023890)	PTGES (ENSECAG00000000943) #26	TOR1B (ENSECAG00000008630) #27	TOR1A (ENSECAG00000013990) #28	C25H9orf78 (ENSECAG00000018958) #29	USP20 (ENSECAG00000008342) #30	FNBP1 (ENSECAG00000012905) #31	GPR107 (ENSECAG00000008964) #32	NCS1 (ENSECAG00000023051)	HMCN2 (ENSECAG00000023231)	ASS1 (ENSECAG00000006717) #34
Donkey	MODERN SPECIES	1	ZDHHC12 (ENSEASG00005030221) #7	PKN3 (ENSEASG00005008409)	ZER1 (ENSEASG00005007785) #8	TBC1D13 (ENSEASG00005007723) #9	ENDOG (ENSEASG00005007720) #10	SPOUT1 (ENSEASG00005007715) #11	KYAT1 (ENSEASG00005007709) #12	LRRC8A (ENSEASG00005007708) #13	PHYHD1 (ENSEASG00005007517) #14	DOLK (ENSEASG00005028058) #15	NUP188 (ENSEASG00005007542) #16	SH3GLB2 (ENSEASG00005008312) #18	MIGA2 (ENSEASG00005008322) #19	DOLPP1 (ENSEASG00005008330) #20	CRAT (ENSEASG00005008333) #21	PTPA (ENSEASG00005008338) #22	IER5L (ENSEASG00005008343) #23	C9orf50 (ENSEASG00005035028)	NTMT1 (ENSEASG00005008353) #24	ASB6 (ENSEASG00005008355) #25	PRRX2 (ENSEASG00005029413)	PTGES (ENSEASG00005028809) #26	TOR1B (ENSEASG00005008361) #27	TOR1A (ENSEASG00005037998) #28	C9orf78 (ENSEASG00005008364) #29	USP20 (ENSEASG00005008368) #30	FNBP1 (ENSEASG00005008374) #31	GPR107 (ENSEASG00005008388) #32	ENSEASG00005024781 #33	HMCN2 (ENSEASG00005008402)	ENSEASG00005032366
Chiroptera	ANCESTRAL SPECIES	8	ENSGT00940000161818	ENSGT00940000156902 #7	ENSGT00530000063187.A #8	ENSGT00940000158674 #9	ENSGT00940000160987 #10	ENSGT00390000016537 #11	ENSGT00940000158797 #12	ENSGT00940000154043.A #13	ENSGT00390000006287 #14	ENSGT00390000004067 #15	ENSGT00390000005742 #16	ENSGT00940000155841 #18	ENSGT00390000008565.a #19	ENSGT00390000013112 #20	ENSGT01060000248556.A.a.a.a #21	ENSGT00390000011500 #22	ENSGT00900000141021.b.a #23	ENSGT00390000008371.b #24	ENSGT00390000006784 #25	ENSGT00940000161643	ENSGT00390000011980.b.b #26	ENSGT00950000182888.a.a.a.j.a #27	ENSGT00950000182888.a.a.a.j.b #28	ENSGT00390000009787 #29	ENSGT00940000158829 #30	ENSGT00950000183047.d #31	ENSGT00940000160451 #32	ENSGT00940000154645.B	ENSGT00940000162328	ENSGT00390000004524 #34	ENSGT00940000156744 #35
Microchiroptera	ANCESTRAL SPECIES	7	ENSGT00940000161818	ENSGT00940000156902 #7	ENSGT00530000063187.A #8	ENSGT00940000158674 #9	ENSGT00940000160987 #10	ENSGT00390000016537 #11	ENSGT00940000158797 #12	ENSGT00940000154043.A #13	ENSGT00390000006287 #14	ENSGT00390000004067 #15	ENSGT00390000005742 #16	ENSGT00940000155841 #18	ENSGT00390000008565.a #19	ENSGT00390000013112 #20	ENSGT01060000248556.A.a.a.a #21	ENSGT00390000011500 #22	ENSGT00900000141021.b.a #23	ENSGT00390000008371.b #24	ENSGT00390000006784 #25	ENSGT00940000161643	ENSGT00950000182888.a.a.a.j.a #27	ENSGT00950000182888.a.a.a.j.b #28	ENSGT00390000009787 #29	ENSGT00940000158829 #30	ENSGT00950000183047.d #31	ENSGT00940000160451 #32	ENSGT00940000154645.B	ENSGT00940000162328	ENSGT00390000004524 #34	ENSGT00940000156744 #35	ENSGT00940000161616 #36
Greater horseshoe bat	MODERN SPECIES	3	PKN3 (ENSRFEG00010021078)	ZDHHC12 (ENSRFEG00010021123) #7	ZER1 (ENSRFEG00010021150) #8	TBC1D13 (ENSRFEG00010021197) #9	ENDOG (ENSRFEG00010021222) #10	SPOUT1 (ENSRFEG00010021243) #11	KYAT1 (ENSRFEG00010021274) #12	LRRC8A (ENSRFEG00010021299) #13	PHYHD1 (ENSRFEG00010021320) #14	DOLK (ENSRFEG00010021371) #15	NUP188 (ENSRFEG00010021406) #16	SH3GLB2 (ENSRFEG00010021469) #18	MIGA2 (ENSRFEG00010021517) #19	DOLPP1 (ENSRFEG00010021538) #20	CRAT (ENSRFEG00010021576) #21	PTPA (ENSRFEG00010021631) #22	IER5L (ENSRFEG00010021671) #23	NTMT1 (ENSRFEG00010021692) #24	ASB6 (ENSRFEG00010021715) #25	PRRX2 (ENSRFEG00010021726)	TOR1A (ENSRFEG00010021736) #28	ENSRFEG00010021746 #27	C9orf78 (ENSRFEG00010021754) #29	USP20 (ENSRFEG00010021769) #30	FNBP1 (ENSRFEG00010021794) #31	GPR107 (ENSRFEG00010021829) #32	NCS1 (ENSRFEG00010021843)	HMCN2 (ENSRFEG00010021885)	ASS1 (ENSRFEG00010021908) #34	FUBP3 (ENSRFEG00010021930) #35	PRDM12 (ENSRFEG00010021941) #36
Microbat	MODERN SPECIES	1399	PKN3 (ENSMLUG00000014295)	ZDHHC12 (ENSMLUG00000014311) #7	ZER1 (ENSMLUG00000004608) #8	TBC1D13 (ENSMLUG00000014313) #9	ENDOG (ENSMLUG00000014319) #10	SPOUT1 (ENSMLUG00000014330) #11	KYAT1 (ENSMLUG00000014338) #12	LRRC8A (ENSMLUG00000011113) #13	PHYHD1 (ENSMLUG00000011117) #14	DOLK (ENSMLUG00000008768) #15	NUP188 (ENSMLUG00000011149) #16	SH3GLB2 (ENSMLUG00000011230) #18	MIGA2 (ENSMLUG00000011248) #19	DOLPP1 (ENSMLUG00000011273) #20	ENSMLUG00000011287 #21	PTPA (ENSMLUG00000011320) #22
Megabat	MODERN SPECIES	1263													MIGA2 (ENSPVAG00000002537) #19	DOLPP1 (ENSPVAG00000002538) #20	CRAT (ENSPVAG00000002539) #21	PTPA (ENSPVAG00000002541) #22	ENSPVAG00000002544
Carnivora	ANCESTRAL SPECIES	18	ENSGT00940000161818	ENSGT00940000156902 #7	ENSGT00530000063187.A #8	ENSGT00940000158674 #9	ENSGT00940000160987 #10	ENSGT00390000016537 #11	ENSGT00940000158797 #12	ENSGT00940000154043.A #13	ENSGT00390000006287 #14	ENSGT00390000004067 #15	ENSGT00390000005742 #16	ENSGT00940000155841 #18	ENSGT00390000008565.a #19	ENSGT00390000013112 #20	ENSGT01060000248556.A.a.a.a #21	ENSGT00390000011500 #22	ENSGT00900000141021.b.a #23	ENSGT00390000004321	ENSGT00390000008371.b #24	ENSGT00390000006784 #25	ENSGT00940000161643	ENSGT00390000011980.b.b #26	ENSGT00950000182888.a.a.a.j.a #27	ENSGT00950000182888.a.a.a.j.b #28	ENSGT00390000009787 #29	ENSGT00940000158829 #30	ENSGT00950000183047.d #31	ENSGT00940000160451 #32	ENSGT00940000163010 #33	ENSGT00940000162328	ENSGT00960000189405
Felidae	ANCESTRAL SPECIES	16	ENSGT00940000161818	ENSGT00940000156902 #7	ENSGT00530000063187.A #8	ENSGT00940000158674 #9	ENSGT00940000160987 #10	ENSGT00390000016537 #11	ENSGT00940000158797 #12	ENSGT00940000154043.A #13	ENSGT00390000006287 #14	ENSGT00390000004067 #15	ENSGT00390000005742 #16	ENSGT00940000155841 #18	ENSGT00390000008565.a #19	ENSGT00390000013112 #20	ENSGT01060000248556.A.a.a.a #21	ENSGT00390000011500 #22	ENSGT00900000141021.b.a #23	ENSGT00390000008371.b #24	ENSGT00390000006784 #25	ENSGT00940000161643	ENSGT00390000011980.b.b #26	ENSGT00950000182888.a.a.a.j.a #27	ENSGT00950000182888.a.a.a.j.b #28	ENSGT00390000009787 #29	ENSGT00940000158829 #30	ENSGT00950000183047.d #31	ENSGT00940000160451 #32	ENSGT00940000154645.B	ENSGT00940000163010 #33	ENSGT00940000162328	ENSGT00390000004524 #34
Panthera	ANCESTRAL SPECIES	11	ENSGT00940000161818	ENSGT00940000156902 #7	ENSGT00530000063187.A #8	ENSGT00940000158674 #9	ENSGT00940000160987 #10	ENSGT00390000016537 #11	ENSGT00940000158797 #12	ENSGT00940000154043.A #13	ENSGT00390000006287 #14	ENSGT00390000004067 #15	ENSGT00390000005742 #16	ENSGT00940000155841 #18	ENSGT00390000008565.a #19	ENSGT00390000013112 #20	ENSGT01060000248556.A.a.a.a #21	ENSGT00390000011500 #22	ENSGT00900000141021.b.a #23	ENSGT00390000008371.b #24	ENSGT00390000006784 #25	ENSGT00940000161643	ENSGT00390000011980.b.b #26	ENSGT00950000182888.a.a.a.j.a #27	ENSGT00950000182888.a.a.a.j.b #28	ENSGT00390000009787 #29	ENSGT00940000158829 #30	ENSGT00950000183047.d #31	ENSGT00940000160451 #32	ENSGT00940000154645.B	ENSGT00940000162328	ENSGT00390000004524 #34	ENSGT00940000156744 #35
Panthera_a	ANCESTRAL SPECIES	10	ENSGT00940000161818	ENSGT00940000156902 #7	ENSGT00530000063187.A #8	ENSGT00940000158674 #9	ENSGT00940000160987 #10	ENSGT00390000016537 #11	ENSGT00940000158797 #12	ENSGT00940000154043.A #13	ENSGT00390000006287 #14	ENSGT00390000004067 #15	ENSGT00390000005742 #16	ENSGT00940000155841 #18	ENSGT00390000008565.a #19	ENSGT00390000013112 #20	ENSGT01060000248556.A.a.a.a #21	ENSGT00390000011500 #22	ENSGT00900000141021.b.a #23	ENSGT00390000008371.b #24	ENSGT00390000006784 #25	ENSGT00940000161643	ENSGT00390000011980.b.b #26	ENSGT00950000182888.a.a.a.j.a #27	ENSGT00950000182888.a.a.a.j.b #28	ENSGT00390000009787 #29	ENSGT00940000158829 #30	ENSGT00950000183047.d #31	ENSGT00940000160451 #32	ENSGT00940000154645.B	ENSGT00940000163010 #33	ENSGT00940000162328	ENSGT00390000004524 #34
lion	MODERN SPECIES	13	ZDHHC12 (ENSPLOG00000014971) #7	ZER1 (ENSPLOG00000014914) #8	TBC1D13 (ENSPLOG00000014777) #9	ENDOG (ENSPLOG00000014686) #10	SPOUT1 (ENSPLOG00000014556) #11	ENSPLOG00000014265 #12	LRRC8A (ENSPLOG00000014161) #13	PHYHD1 (ENSPLOG00000014084) #14	DOLK (ENSPLOG00000014046) #15	ENSPLOG00000014026	NUP188 (ENSPLOG00000013614) #16	SH3GLB2 (ENSPLOG00000013112) #18	MIGA2 (ENSPLOG00000012901) #19	DOLPP1 (ENSPLOG00000012829) #20	CRAT (ENSPLOG00000012767) #21	PTPA (ENSPLOG00000012391) #22	IER5L (ENSPLOG00000012283) #23	NTMT1 (ENSPLOG00000012032) #24	ASB6 (ENSPLOG00000011945) #25	PRRX2 (ENSPLOG00000011852)	ENSPLOG00000011806 #26	TOR1B (ENSPLOG00000011766) #27	ENSPLOG00000011711 #28	C9orf78 (ENSPLOG00000011661) #29	USP20 (ENSPLOG00000011587) #30	FNBP1 (ENSPLOG00000011409) #31	GPR107 (ENSPLOG00000010916) #32	ENSPLOG00000010826 #33	HMCN2 (ENSPLOG00000010351)	ASS1 (ENSPLOG00000010161) #34	FUBP3 (ENSPLOG00000010042) #35
leopard	MODERN SPECIES	83	ZDHHC12 (ENSPPRG00000012454) #7	ZER1 (ENSPPRG00000012995) #8	TBC1D13 (ENSPPRG00000013950) #9	ENDOG (ENSPPRG00000014165) #10	SPOUT1 (ENSPPRG00000014948) #11	KYAT1 (ENSPPRG00000019755) #12	LRRC8A (ENSPPRG00000021778) #13	PHYHD1 (ENSPPRG00000024842) #14	ENSPPRG00000021639 #15	ENSPPRG00000021650 #15	NUP188 (ENSPPRG00000023500) #16	SH3GLB2 (ENSPPRG00000001028) #18	MIGA2 (ENSPPRG00000001851) #19	DOLPP1 (ENSPPRG00000002953) #20	CRAT (ENSPPRG00000004484) #21	PTPA (ENSPPRG00000010217) #22	ENSPPRG00000014926	ENSPPRG00000014932	NTMT1 (ENSPPRG00000012689) #24	ASB6 (ENSPPRG00000014052) #25	PRRX2 (ENSPPRG00000017132)	PTGES (ENSPPRG00000018646) #26	TOR1B (ENSPPRG00000020142) #27	TOR1A (ENSPPRG00000021638) #28	C9orf78 (ENSPPRG00000000737) #29	USP20 (ENSPPRG00000002771) #30	FNBP1 (ENSPPRG00000005330) #31	GPR107 (ENSPPRG00000008226) #32	NCS1 (ENSPPRG00000009454)	ASS1 (ENSPPRG00000020977) #34	FUBP3 (ENSPPRG00000023251) #35
Tiger	MODERN SPECIES	121	SET (ENSPTIG00000019383)	PKN3 (ENSPTIG00000021126)	ZDHHC12 (ENSPTIG00000002433) #7	ZER1 (ENSPTIG00000006324) #8	TBC1D13 (ENSPTIG00000007577) #9	SPOUT1 (ENSPTIG00000010445) #11	KYAT1 (ENSPTIG00000011042) #12	LRRC8A (ENSPTIG00000014161) #13	PHYHD1 (ENSPTIG00000014637) #14	DOLK (ENSPTIG00000005843) #15	NUP188 (ENSPTIG00000017265) #16	SH3GLB2 (ENSPTIG00000019557) #18	MIGA2 (ENSPTIG00000021378) #19	DOLPP1 (ENSPTIG00000021629) #20	CRAT (ENSPTIG00000000984) #21	PTPA (ENSPTIG00000005396) #22	ENSPTIG00000011881	NTMT1 (ENSPTIG00000012394) #24	ASB6 (ENSPTIG00000016471) #25	ENSPTIG00000017128	PTGES (ENSPTIG00000017624) #26	TOR1B (ENSPTIG00000018297) #27	TOR1A (ENSPTIG00000019171) #28	C9orf78 (ENSPTIG00000004001) #29	ENSPTIG00000005975 #30	FNBP1 (ENSPTIG00000008070) #31	GPR107 (ENSPTIG00000014552) #32	NCS1 (ENSPTIG00000016706)	ENSPTIG00000018225	ASS1 (ENSPTIG00000018633) #34	FUBP3 (ENSPTIG00000019979) #35
Cat	MODERN SPECIES	244	PKN3 (ENSFCAG00000005851)	ZDHHC12 (ENSFCAG00000005854) #7	ZER1 (ENSFCAG00000005856) #8	TBC1D13 (ENSFCAG00000005857) #9	ENDOG (ENSFCAG00000005859) #10	SPOUT1 (ENSFCAG00000030593) #11	KYAT1 (ENSFCAG00000005862) #12	LRRC8A (ENSFCAG00000005863) #13	PHYHD1 (ENSFCAG00000005865) #14	DOLK (ENSFCAG00000024940) #15	NUP188 (ENSFCAG00000005867) #16	SH3GLB2 (ENSFCAG00000005872) #18	MIGA2 (ENSFCAG00000005875) #19	DOLPP1 (ENSFCAG00000005877) #20	CRAT (ENSFCAG00000005880) #21	PTPA (ENSFCAG00000005882) #22	IER5L (ENSFCAG00000041138) #23	ENSFCAG00000025551	NTMT1 (ENSFCAG00000043209) #24	ASB6 (ENSFCAG00000004756) #25	PRRX2 (ENSFCAG00000004758)	PTGES (ENSFCAG00000004759) #26	TOR1A (ENSFCAG00000004760) #28	TOR1B (ENSFCAG00000008977) #27	CD4H9orf78 (ENSFCAG00000004761) #29	USP20 (ENSFCAG00000013549) #30	FNBP1 (ENSFCAG00000035160) #31	GPR107 (ENSFCAG00000005107) #32	NCS1 (ENSFCAG00000005109) #33	HMCN2 (ENSFCAG00000030267)	ASS1 (ENSFCAG00000005111) #34
Caniformia	ANCESTRAL SPECIES	16	ENSGT00940000161818	ENSGT00940000156902 #7	ENSGT00530000063187.A #8	ENSGT00940000158674 #9	ENSGT00940000160987 #10	ENSGT00390000016537 #11	ENSGT00940000158797 #12	ENSGT00940000154043.A #13	ENSGT00390000006287 #14	ENSGT00390000004067 #15	ENSGT00390000005742 #16	ENSGT00940000155841 #18	ENSGT00390000008565.a #19	ENSGT00390000013112 #20	ENSGT01060000248556.A.a.a.a #21	ENSGT00390000011500 #22	ENSGT00900000141021.b.a #23	ENSGT00390000004321	ENSGT00390000008371.b #24	ENSGT00390000006784 #25	ENSGT00940000161643	ENSGT00390000011980.b.b #26	ENSGT00950000182888.a.a.a.j.a #27	ENSGT00950000182888.a.a.a.j.b #28	ENSGT00390000009787 #29	ENSGT00940000158829 #30	ENSGT00950000183047.d #31	ENSGT00940000160451 #32	ENSGT00940000163010 #33	ENSGT00940000162328	ENSGT00960000189405
Canidae	ANCESTRAL SPECIES	2	ENSGT00940000161818	ENSGT00940000156902 #7	ENSGT00530000063187.A #8	ENSGT00940000158674 #9	ENSGT00940000160987 #10	ENSGT00390000016537 #11	ENSGT00940000158797 #12	ENSGT00940000154043.A #13	ENSGT00390000006287 #14	ENSGT00390000004067 #15	ENSGT00390000005742 #16	ENSGT00940000155841 #18	ENSGT00390000008565.a #19	ENSGT00390000013112 #20	ENSGT01060000248556.A.a.a.a #21	ENSGT00390000011500 #22	ENSGT00950000182802.B.a.a.a.a.i.d.c.a.a	ENSGT00900000141021.b.a #23	ENSGT00390000004321	ENSGT00390000008371.b #24	ENSGT00390000006784 #25	ENSGT00940000161643	ENSGT00390000011980.b.b #26	ENSGT00950000182888.a.a.a.j.a #27	ENSGT00950000182888.a.a.a.j.b #28	ENSGT00390000009787 #29	ENSGT00940000158829 #30	ENSGT00950000183047.d #31	ENSGT00940000160451 #32	ENSGT00940000163010 #33	ENSGT00940000154645.B
Red fox	MODERN SPECIES	77	PKN3 (ENSVVUG00000025667)	ZDHHC12 (ENSVVUG00000025833) #7	ZER1 (ENSVVUG00000025838) #8	TBC1D13 (ENSVVUG00000025967) #9	ENDOG (ENSVVUG00000025998) #10	SPOUT1 (ENSVVUG00000025999) #11	KYAT1 (ENSVVUG00000026017) #12	LRRC8A (ENSVVUG00000026053) #13	PHYHD1 (ENSVVUG00000026059) #14	DOLK (ENSVVUG00000026142) #15	NUP188 (ENSVVUG00000026171) #16	SH3GLB2 (ENSVVUG00000026951) #18	MIGA2 (ENSVVUG00000026980) #19	DOLPP1 (ENSVVUG00000027005) #20	CRAT (ENSVVUG00000027026) #21	PTPA (ENSVVUG00000027345) #22	ENSVVUG00000027372	ENSVVUG00000027374 #23	ENSVVUG00000027383	NTMT1 (ENSVVUG00000027389) #24	ASB6 (ENSVVUG00000027390) #25	PRRX2 (ENSVVUG00000027397)	PTGES (ENSVVUG00000027400) #26	TOR1B (ENSVVUG00000027404) #27	TOR1A (ENSVVUG00000027408) #28	CUNH9orf78 (ENSVVUG00000027415) #29	USP20 (ENSVVUG00000027434) #30	FNBP1 (ENSVVUG00000027452) #31	ENSVVUG00000027457	GPR107 (ENSVVUG00000027461) #32	ENSVVUG00000027466 #33
Canis_lupus	ANCESTRAL SPECIES	3	ENSGT00940000161818	ENSGT00940000156902 #7	ENSGT00530000063187.A #8	ENSGT00940000158674 #9	ENSGT00940000160987 #10	ENSGT00390000016537 #11	ENSGT00940000158797 #12	ENSGT00940000154043.A #13	ENSGT00390000006287 #14	ENSGT00390000004067 #15	ENSGT00390000005742 #16	ENSGT00940000155841 #18	ENSGT00390000008565.a #19	ENSGT00390000013112 #20	ENSGT01060000248556.A.a.a.a #21	ENSGT00390000011500 #22	ENSGT00950000182802.B.a.a.a.a.i.d.c.a.a	ENSGT00900000141021.b.a #23	ENSGT00390000004321	ENSGT00390000008371.b #24	ENSGT00390000006784 #25	ENSGT00940000161643	ENSGT00390000011980.b.b #26	ENSGT00950000182888.a.a.a.j.a #27	ENSGT00950000182888.a.a.a.j.b #28	ENSGT00390000009787 #29	ENSGT00940000158829 #30	ENSGT00950000183047.d #31	ENSGT00940000160451 #32	ENSGT00940000154645.B	ENSGT00940000162328
Dog	MODERN SPECIES	37	PKN3 (ENSCAFG00845026684)	ZDHHC12 (ENSCAFG00845026605) #7	ZER1 (ENSCAFG00845026245) #8	TBC1D13 (ENSCAFG00845026099) #9	ENDOG (ENSCAFG00845026038) #10	SPOUT1 (ENSCAFG00845025964) #11	KYAT1 (ENSCAFG00845025617) #12	LRRC8A (ENSCAFG00845025448) #13	PHYHD1 (ENSCAFG00845025344) #14	DOLK (ENSCAFG00845025311) #15	NUP188 (ENSCAFG00845025077) #16	SH3GLB2 (ENSCAFG00845024630) #18	MIGA2 (ENSCAFG00845024378) #19	DOLPP1 (ENSCAFG00845024281) #20	CRAT (ENSCAFG00845024111) #21	PTPA (ENSCAFG00845023830) #22	ENSCAFG00845023733	IER5L (ENSCAFG00845023709) #23	C9orf50 (ENSCAFG00845023660)	NTMT1 (ENSCAFG00845023587) #24	ASB6 (ENSCAFG00845023463) #25	PRRX2 (ENSCAFG00845023411)	PTGES (ENSCAFG00845023377) #26	TOR1B (ENSCAFG00845023333) #27	TOR1A (ENSCAFG00845023305) #28	C9orf78 (ENSCAFG00845023258) #29	USP20 (ENSCAFG00845023043) #30	FNBP1 (ENSCAFG00845022336) #31	GPR107 (ENSCAFG00845021950) #32	ENSCAFG00845021859 #33	ENSCAFG00845021728
Dingo	DUPLICATION
Dingo	MODERN SPECIES	327	ZDHHC12 (ENSCAFG00020022850) #7	ZER1 (ENSCAFG00020022864) #8	TBC1D13 (ENSCAFG00020022951) #9	ENDOG (ENSCAFG00020022974) #10	SPOUT1 (ENSCAFG00020022980) #11	KYAT1 (ENSCAFG00020022992) #12	LRRC8A (ENSCAFG00020022997) #13	PHYHD1 (ENSCAFG00020023006) #14	DOLK (ENSCAFG00020023027) #15	NUP188 (ENSCAFG00020023102) #16	SH3GLB2 (ENSCAFG00020023573) #18	MIGA2 (ENSCAFG00020023580) #19	DOLPP1 (ENSCAFG00020023632) #20	CRAT (ENSCAFG00020023635) #21	ENSCAFG00020023640 #22	ENSCAFG00020023642 #22	ENSCAFG00020023644	IER5L (ENSCAFG00020023645) #23	ENSCAFG00020023649	NTMT1 (ENSCAFG00020023651) #24	ASB6 (ENSCAFG00020023653) #25	PRRX2 (ENSCAFG00020023669)	PTGES (ENSCAFG00020023680) #26	TOR1B (ENSCAFG00020023687) #27	TOR1A (ENSCAFG00020023689) #28	C9orf78 (ENSCAFG00020023693) #29	USP20 (ENSCAFG00020023699) #30	FNBP1 (ENSCAFG00020023720) #31	GPR107 (ENSCAFG00020023954) #32	NCS1 (ENSCAFG00020023988)	ENSCAFG00020023990
Dingo	MODERN SPECIES	327	PKN3 (ENSCAFG00020022824)	ZDHHC12 (ENSCAFG00020022850) #7	ZER1 (ENSCAFG00020022864) #8	TBC1D13 (ENSCAFG00020022951) #9	ENDOG (ENSCAFG00020022974) #10	SPOUT1 (ENSCAFG00020022980) #11	KYAT1 (ENSCAFG00020022992) #12	LRRC8A (ENSCAFG00020022997) #13	PHYHD1 (ENSCAFG00020023006) #14	DOLK (ENSCAFG00020023027) #15	NUP188 (ENSCAFG00020023102) #16	SH3GLB2 (ENSCAFG00020023573) #18	MIGA2 (ENSCAFG00020023580) #19	DOLPP1 (ENSCAFG00020023632) #20	CRAT (ENSCAFG00020023635) #21	ENSCAFG00020023640 #22	ENSCAFG00020023642 #22	ENSCAFG00020023644	IER5L (ENSCAFG00020023645) #23	ENSCAFG00020023649	NTMT1 (ENSCAFG00020023651) #24	ASB6 (ENSCAFG00020023653) #25	PRRX2 (ENSCAFG00020023669)	PTGES (ENSCAFG00020023680) #26	TOR1B (ENSCAFG00020023687) #27	TOR1A (ENSCAFG00020023689) #28	C9orf78 (ENSCAFG00020023693) #29	USP20 (ENSCAFG00020023699) #30	FNBP1 (ENSCAFG00020023720) #31	GPR107 (ENSCAFG00020023954) #32	NCS1 (ENSCAFG00020023988)
Caniformia_b	ANCESTRAL SPECIES	12	ENSGT00940000161818	ENSGT00940000156902 #7	ENSGT00530000063187.A #8	ENSGT00940000158674 #9	ENSGT00940000160987 #10	ENSGT00390000016537 #11	ENSGT00940000158797 #12	ENSGT00940000154043.A #13	ENSGT00390000006287 #14	ENSGT00390000004067 #15	ENSGT00390000005742 #16	ENSGT00940000155841 #18	ENSGT00390000008565.a #19	ENSGT00390000013112 #20	ENSGT01060000248556.A.a.a.a #21	ENSGT00390000011500 #22	ENSGT00900000141021.b.a #23	ENSGT00390000004321	ENSGT00390000008371.b #24	ENSGT00390000006784 #25	ENSGT00940000161643	ENSGT00390000011980.b.b #26	ENSGT00950000182888.a.a.a.j.a #27	ENSGT00950000182888.a.a.a.j.b #28	ENSGT00390000009787 #29	ENSGT00940000158829 #30	ENSGT00950000183047.d #31	ENSGT00940000160451 #32	ENSGT00940000163010 #33	ENSGT00940000162328	ENSGT00390000004524 #34
Mustelinae	ANCESTRAL SPECIES	12	ENSGT00940000161818	ENSGT00940000156902 #7	ENSGT00530000063187.A #8	ENSGT00940000158674 #9	ENSGT00940000160987 #10	ENSGT00390000016537 #11	ENSGT00940000158797 #12	ENSGT00940000154043.A #13	ENSGT00390000006287 #14	ENSGT00390000004067 #15	ENSGT00390000005742 #16	ENSGT00940000155841 #18	ENSGT00390000008565.a #19	ENSGT00390000013112 #20	ENSGT01060000248556.A.a.a.a #21	ENSGT00390000011500 #22	ENSGT00900000141021.b.a #23	ENSGT00390000004321	ENSGT00390000008371.b #24	ENSGT00390000006784 #25	ENSGT00940000161643	ENSGT00390000011980.b.b #26	ENSGT00950000182888.a.a.a.j.a #27	ENSGT00950000182888.a.a.a.j.b #28	ENSGT00390000009787 #29	ENSGT00940000158829 #30	ENSGT00950000183047.d #31	ENSGT00940000160451 #32	ENSGT00940000163010 #33	ENSGT00940000162328	ENSGT00390000004524 #34
American mink	MODERN SPECIES	182	PKN3 (ENSNVIG00000015008)	ZDHHC12 (ENSNVIG00000015192) #7	ZER1 (ENSNVIG00000015266) #8	TBC1D13 (ENSNVIG00000015384) #9	ENDOG (ENSNVIG00000015703) #10	SPOUT1 (ENSNVIG00000015760) #11	KYAT1 (ENSNVIG00000015951) #12	LRRC8A (ENSNVIG00000016088) #13	PHYHD1 (ENSNVIG00000016113) #14	DOLK (ENSNVIG00000016204) #15	NUP188 (ENSNVIG00000016213) #16	SH3GLB2 (ENSNVIG00000016272) #18	FA73B (ENSNVIG00000016393) #19	DOLPP1 (ENSNVIG00000016410) #20	CRAT (ENSNVIG00000016455) #21	PTPA (ENSNVIG00000016504) #22	NTMT1 (ENSNVIG00000016588) #24	ASB6 (ENSNVIG00000016615) #25	PRRX2 (ENSNVIG00000016658)	PTGES (ENSNVIG00000016663) #26	TOR1B (ENSNVIG00000016675) #27	TOR1A (ENSNVIG00000016693) #28	C9orf78 (ENSNVIG00000016711) #29	USP20 (ENSNVIG00000016742) #30	FNBP1 (ENSNVIG00000016798) #31	GPR107 (ENSNVIG00000017208) #32	ENSNVIG00000017368 #33	HMCN2 (ENSNVIG00000017387)	ASS1 (ENSNVIG00000017500) #34	FUBP3 (ENSNVIG00000017557) #35	EXOSC2 (ENSNVIG00000017595) #37
Ferret	MODERN SPECIES	218	ENSMPUG00000013069	PKN3 (ENSMPUG00000013051)	ZDHHC12 (ENSMPUG00000013061) #7	ZER1 (ENSMPUG00000013041) #8	TBC1D13 (ENSMPUG00000013034) #9	ENDOG (ENSMPUG00000013024) #10	SPOUT1 (ENSMPUG00000013017) #11	KYAT1 (ENSMPUG00000013007) #12	LRRC8A (ENSMPUG00000012999) #13	DOLK (ENSMPUG00000019223) #15	NUP188 (ENSMPUG00000012985) #16	SH3GLB2 (ENSMPUG00000012981) #18	MIGA2 (ENSMPUG00000012978) #19	DOLPP1 (ENSMPUG00000012975) #20	CRAT (ENSMPUG00000012968) #21	PTPA (ENSMPUG00000012951) #22	IER5L (ENSMPUG00000012947) #23	C9orf50 (ENSMPUG00000012933)	NTMT1 (ENSMPUG00000012923) #24	ASB6 (ENSMPUG00000012917) #25	ENSMPUG00000012915	PRRX2 (ENSMPUG00000012909)	PTGES (ENSMPUG00000012906) #26	ENSMPUG00000019221	TOR1B (ENSMPUG00000012902) #27	ENSMPUG00000019217	C9orf78 (ENSMPUG00000012876) #29	USP20 (ENSMPUG00000012869) #30	FNBP1 (ENSMPUG00000012864) #31	GPR107 (ENSMPUG00000012859) #32	ENSMPUG00000012854 #33
Ursidae	ANCESTRAL SPECIES	6	ENSGT00940000161818	ENSGT00940000156902 #7	ENSGT00530000063187.A #8	ENSGT00940000158674 #9	ENSGT00940000160987 #10	ENSGT00390000016537 #11	ENSGT00940000158797 #12	ENSGT00940000154043.A #13	ENSGT00390000006287 #14	ENSGT00390000004067 #15	ENSGT00390000005742 #16	ENSGT00940000155841 #18	ENSGT00390000008565.a #19	ENSGT00390000013112 #20	ENSGT01060000248556.A.a.a.a #21	ENSGT00390000011500 #22	ENSGT00900000141021.b.a #23	ENSGT00390000008371.b #24	ENSGT00390000006784 #25	ENSGT00940000161643	ENSGT00390000011980.b.b #26	ENSGT00950000182888.a.a.a.j.a #27	ENSGT00950000182888.a.a.a.j.b #28	ENSGT00390000009787 #29	ENSGT00940000158829 #30	ENSGT00950000183047.d #31	ENSGT00940000160451 #32	ENSGT00940000163010 #33	ENSGT00940000162328	ENSGT00390000004524 #34	ENSGT00940000156744 #35
Ursus	ANCESTRAL SPECIES	15	ENSGT00940000161818	ENSGT00940000156902 #7	ENSGT00530000063187.A #8	ENSGT00940000158674 #9	ENSGT00940000160987 #10	ENSGT00390000016537 #11	ENSGT00940000158797 #12	ENSGT00940000154043.A #13	ENSGT00390000006287 #14	ENSGT00390000004067 #15	ENSGT00390000005742 #16	ENSGT00940000155841 #18	ENSGT00390000008565.a #19	ENSGT00390000013112 #20	ENSGT01060000248556.A.a.a.a #21	ENSGT00390000011500 #22	ENSGT00390000004321	ENSGT00390000008371.b #24	ENSGT00390000006784 #25	ENSGT00940000161643	ENSGT00390000011980.b.b #26	ENSGT00950000182888.a.a.a.j.a #27	ENSGT00950000182888.a.a.a.j.b #28	ENSGT00390000009787 #29	ENSGT00940000158829 #30	ENSGT00950000183047.d #31	ENSGT00940000160451 #32	ENSGT00940000163010 #33	ENSGT00940000162328	ENSGT00390000004524 #34	ENSGT00940000156744 #35
Polar bear	MODERN SPECIES	214	SETSIP (ENSUMAG00000020906)	PKN3 (ENSUMAG00000020842)	ZDHHC12 (ENSUMAG00000020825) #7	ZER1 (ENSUMAG00000020644) #8	TBC1D13 (ENSUMAG00000020633) #9	SPOUT1 (ENSUMAG00000020628) #11	KYAT1 (ENSUMAG00000020623) #12	LRRC8A (ENSUMAG00000020617) #13	PHYHD1 (ENSUMAG00000020615) #14	DOLK (ENSUMAG00000020613) #15	ENSUMAG00000020594 #16	SH3GLB2 (ENSUMAG00000020378) #18	MIGA2 (ENSUMAG00000020370) #19	ENSUMAG00000020366	CRAT (ENSUMAG00000020362) #21	PTPA (ENSUMAG00000020289) #22	NTMT1 (ENSUMAG00000020256) #24	ASB6 (ENSUMAG00000020240) #25	PRRX2 (ENSUMAG00000020232)	PTGES (ENSUMAG00000020230) #26	TOR1B (ENSUMAG00000020225) #27	TOR1A (ENSUMAG00000020220) #28	C9orf78 (ENSUMAG00000020215) #29	ENSUMAG00000020209 #30	FNBP1 (ENSUMAG00000019252) #31	GPR107 (ENSUMAG00000019019) #32	ENSUMAG00000018981 #33	ENSUMAG00000018959	ASS1 (ENSUMAG00000018929) #34	FUBP3 (ENSUMAG00000018745) #35	EXOSC2 (ENSUMAG00000018726) #37
American black bear	MODERN SPECIES	2366																ENSUAMG00000008968 #22
Giant Panda	MODERN SPECIES	17	ENSAMEG00000015686	PKN3 (ENSAMEG00000015712)	ENSAMEG00000015755 #7	ZER1 (ENSAMEG00000015759) #8	TBC1D13 (ENSAMEG00000023701) #9	SPOUT1 (ENSAMEG00000015808) #11	KYAT1 (ENSAMEG00000015821) #12	LRRC8A (ENSAMEG00000015843) #13	PHYHD1 (ENSAMEG00000015846) #14	DOLK (ENSAMEG00000019109) #15	NUP188 (ENSAMEG00000015857) #16	SH3GLB2 (ENSAMEG00000015905) #18	MIGA2 (ENSAMEG00000015926) #19	DOLPP1 (ENSAMEG00000015935) #20	CRAT (ENSAMEG00000015939) #21	PTPA (ENSAMEG00000015969) #22	ENSAMEG00000025081 #23	NTMT1 (ENSAMEG00000026209) #24	C9orf50 (ENSAMEG00000015986)	ASB6 (ENSAMEG00000015998) #25	PRRX2 (ENSAMEG00000016011)	PTGES (ENSAMEG00000031097) #26	TOR1B (ENSAMEG00000016018) #27	TOR1A (ENSAMEG00000016037) #28	C9orf78 (ENSAMEG00000016061) #29	USP20 (ENSAMEG00000016078) #30	FNBP1 (ENSAMEG00000016090) #31	GPR107 (ENSAMEG00000016130) #32	ENSAMEG00000016156 #33	HMCN2 (ENSAMEG00000024751)	ASS1 (ENSAMEG00000016184) #34
Atlantogenata	ANCESTRAL SPECIES	47	ENSGT00940000161818	ENSGT00940000156902 #7	ENSGT00530000063187.A #8	ENSGT00940000158674 #9	ENSGT00940000160987.c #10	ENSGT00390000016537 #11	ENSGT00940000158797 #12	ENSGT00940000154043.A #13	ENSGT00390000006287 #14	ENSGT00390000004067 #15	ENSGT00390000005742 #16	ENSGT00940000155841 #18	ENSGT00390000008565.a #19	ENSGT00390000013112 #20	ENSGT01060000248556.A.a.a.a #21	ENSGT00390000011500 #22	ENSGT00900000141021.b.a #23	ENSGT00390000004321	ENSGT00390000008371.b #24	ENSGT00390000006784 #25	ENSGT00940000161643	ENSGT00390000011980.b.b #26	ENSGT00950000182888.a.a.a.j.a #27	ENSGT00950000182888.a.a.a.j.b #28	ENSGT00390000009787 #29	ENSGT00940000158829 #30	ENSGT00950000183047.d #31	ENSGT00940000160451 #32	ENSGT00940000154645.B	ENSGT00940000162328	ENSGT00940000165095
Xenarthra	ANCESTRAL SPECIES	301				ENSGT00940000158674 #9	ENSGT00940000160987.c #10	ENSGT00390000016537 #11	ENSGT00940000158797 #12	ENSGT00940000154043.A #13	ENSGT00390000006287 #14	ENSGT00390000004067 #15	ENSGT00390000005742 #16	ENSGT00940000155841 #18	ENSGT00390000008565.a #19	ENSGT00390000013112 #20	ENSGT01060000248556.A.a.a.a #21	ENSGT00390000011500 #22	ENSGT00900000141021.b.a #23
Armadillo	MODERN SPECIES	1996				TBC1D13 (ENSDNOG00000025500) #9	ENDOG (ENSDNOG00000031222) #10	SPOUT1 (ENSDNOG00000007388) #11	ENSDNOG00000007928 #12	LRRC8A (ENSDNOG00000042590) #13	PHYHD1 (ENSDNOG00000011832) #14	DOLK (ENSDNOG00000011846) #15	NUP188 (ENSDNOG00000011851) #16	SH3GLB2 (ENSDNOG00000035101) #18	MIGA2 (ENSDNOG00000041472) #19	DOLPP1 (ENSDNOG00000005043) #20	CRAT (ENSDNOG00000005051) #21	PTPA (ENSDNOG00000039209) #22	IER5L (ENSDNOG00000036171) #23
Sloth	MODERN SPECIES	166															ENSCHOG00000009973 #21	PTPA (ENSCHOG00000009985) #22
Afrotheria	ANCESTRAL SPECIES		ENSGT00940000161818	ENSGT00940000156902 #7	ENSGT00530000063187.A #8	ENSGT00940000158674 #9	ENSGT00940000160987.c #10	ENSGT00390000016537 #11	ENSGT00940000158797 #12	ENSGT00940000154043.A #13	ENSGT00390000006287 #14	ENSGT00390000004067 #15	ENSGT00390000005742 #16	ENSGT00940000155841 #18	ENSGT00390000008565.a #19	ENSGT00390000013112 #20	ENSGT01060000248556.A.a.a.a #21	ENSGT00390000011500 #22	ENSGT00900000141021.b.a #23	ENSGT00390000004321	ENSGT00390000008371.b #24	ENSGT00390000006784 #25	ENSGT00940000161643	ENSGT00390000011980.b.b #26	ENSGT00950000182888.a.a.a.j.a #27	ENSGT00950000182888.a.a.a.j.b #28	ENSGT00390000009787 #29	ENSGT00940000158829 #30	ENSGT00950000183047.d #31	ENSGT00940000160451 #32	ENSGT00940000154645.B	ENSGT00940000162328	ENSGT00940000165095
Tenrec	MODERN SPECIES	197															CRAT (ENSETEG00000005744) #21	PTPA (ENSETEG00000005750) #22
Afrotheria_a	ANCESTRAL SPECIES		ENSGT00940000161818	ENSGT00940000156902 #7	ENSGT00530000063187.A #8	ENSGT00940000158674 #9	ENSGT00940000160987.c #10	ENSGT00390000016537 #11	ENSGT00940000158797 #12	ENSGT00940000154043.A #13	ENSGT00390000006287 #14	ENSGT00390000004067 #15	ENSGT00390000005742 #16	ENSGT00940000155841 #18	ENSGT00390000008565.a #19	ENSGT00390000013112 #20	ENSGT01060000248556.A.a.a.a #21	ENSGT00390000011500 #22	ENSGT00900000141021.b.a #23	ENSGT00390000004321	ENSGT00390000008371.b #24	ENSGT00390000006784 #25	ENSGT00940000161643	ENSGT00390000011980.b.b #26	ENSGT00950000182888.a.a.a.j.a #27	ENSGT00950000182888.a.a.a.j.b #28	ENSGT00390000009787 #29	ENSGT00940000158829 #30	ENSGT00950000183047.d #31	ENSGT00940000160451 #32	ENSGT00940000154645.B	ENSGT00940000162328	ENSGT00940000165095
Hyrax	MODERN SPECIES	5080														DOLPP1 (ENSPCAG00000015828) #20	CRAT (ENSPCAG00000015889) #21	PTPA (ENSPCAG00000015975) #22
Elephant	MODERN SPECIES	472	SET (ENSLAFG00000030310)	ZDHHC12 (ENSLAFG00000028584) #7	ZER1 (ENSLAFG00000012950) #8	TBC1D13 (ENSLAFG00000021344) #9	ENDOG (ENSLAFG00000028267) #10	SPOUT1 (ENSLAFG00000014778) #11	KYAT1 (ENSLAFG00000022510) #12	LRRC8A (ENSLAFG00000018674) #13	PHYHD1 (ENSLAFG00000031812) #14	DOLK (ENSLAFG00000027684) #15	NUP188 (ENSLAFG00000014921) #16	SH3GLB2 (ENSLAFG00000014943) #18	DOLPP1 (ENSLAFG00000012666) #20	MIGA2 (ENSLAFG00000012657) #19	CRAT (ENSLAFG00000016510) #21	PTPA (ENSLAFG00000016517) #22	IER5L (ENSLAFG00000016528) #23	ENSLAFG00000002341	NTMT1 (ENSLAFG00000002344) #24	ASB6 (ENSLAFG00000002346) #25	PRRX2 (ENSLAFG00000002347)	PTGES (ENSLAFG00000015413) #26	TOR1B (ENSLAFG00000009757) #27	TOR1A (ENSLAFG00000009760) #28	C9orf78 (ENSLAFG00000009762) #29	USP20 (ENSLAFG00000009765) #30	FNBP1 (ENSLAFG00000009771) #31	GPR107 (ENSLAFG00000002123) #32	NCS1 (ENSLAFG00000004356)	ENSLAFG00000029599	ENSLAFG00000028874
Marsupialia	ANCESTRAL SPECIES	18	ENSGT00940000156902 #7	ENSGT00530000063187.A #8	ENSGT00940000158674 #9	ENSGT00940000160987 #10	ENSGT00390000016537 #11	ENSGT00940000158797 #12	ENSGT00940000154043.A #13	ENSGT00390000006287 #14	ENSGT00390000004067 #15	ENSGT00390000005742 #16	ENSGT00940000155841 #18	ENSGT00390000009902.h	ENSGT00390000008565.a #19	ENSGT00390000013112 #20	ENSGT01060000248556.A.a.a.a #21	ENSGT00390000011500 #22	ENSGT00900000141021.b.a #23	ENSGT00390000008371.b #24	ENSGT00390000006784 #25	ENSGT00940000161643	ENSGT00390000011980.b.b #26	ENSGT00950000182888.a.a.a.j.a #27	ENSGT00950000182888.a.a.a.j.b #28	ENSGT00390000009787.a #29	ENSGT00940000158829 #30	ENSGT00950000183047.d #31	ENSGT00940000160451 #32	ENSGT00940000154645.B	ENSGT00940000162328	ENSGT00390000004524 #34	ENSGT00940000156744 #35
Opossum	MODERN SPECIES		PKN3 (ENSMODG00000006395)	ZDHHC12 (ENSMODG00000006407) #7	ZER1 (ENSMODG00000006425) #8	TBC1D13 (ENSMODG00000006451) #9	ENDOG (ENSMODG00000006458) #10	SPOUT1 (ENSMODG00000006461) #11	KYAT1 (ENSMODG00000047627) #12	LRRC8A (ENSMODG00000006491) #13	DOLK (ENSMODG00000023342) #15	NUP188 (ENSMODG00000006611) #16	SH3GLB2 (ENSMODG00000006632) #18	ENSMODG00000000199	MIGA2 (ENSMODG00000006670) #19	DOLPP1 (ENSMODG00000006683) #20	CRAT (ENSMODG00000006706) #21	PTPA (ENSMODG00000006724) #22	IER5L (ENSMODG00000006731) #23	NTMT1 (ENSMODG00000006752) #24	ASB6 (ENSMODG00000006761) #25	PRRX2 (ENSMODG00000006772)	ENSMODG00000006776 #26	TOR1B (ENSMODG00000006789) #27	TOR1A (ENSMODG00000006810) #28	ENSMODG00000006832 #29	USP20 (ENSMODG00000006916) #30	FNBP1 (ENSMODG00000006998) #31	GPR107 (ENSMODG00000007041) #32	ENSMODG00000049281	NCS1 (ENSMODG00000007066)	HMCN2 (ENSMODG00000011793)	ASS1 (ENSMODG00000012093) #34
Marsupialia_b	ANCESTRAL SPECIES	5	ENSGT00940000156902 #7	ENSGT00530000063187.A #8	ENSGT00940000158674 #9	ENSGT00940000160987 #10	ENSGT00390000016537 #11	ENSGT00940000158797 #12	ENSGT00940000154043.A #13	ENSGT00390000006287 #14	ENSGT00390000004067 #15	ENSGT00390000005742 #16	ENSGT00940000155841 #18	ENSGT00390000009902.h	ENSGT00390000008565.a #19	ENSGT00390000013112 #20	ENSGT01060000248556.A.a.a.a #21	ENSGT00390000011500 #22	ENSGT00900000141021.b.a #23	ENSGT00390000008371.b #24	ENSGT00390000006784 #25	ENSGT00940000161643	ENSGT00390000011980.b.b #26	ENSGT00950000182888.a.a.a.j.a #27	ENSGT00950000182888.a.a.a.j.b #28	ENSGT00390000009787.a #29	ENSGT00940000158829 #30	ENSGT00950000183047.d #31	ENSGT00940000160451 #32	ENSGT00940000154645.B	ENSGT00940000163010 #33	ENSGT00940000162328	ENSGT00390000004524 #34
Diprotodontia	ANCESTRAL SPECIES	4	ENSGT00940000156902 #7	ENSGT00530000063187.A #8	ENSGT00940000158674 #9	ENSGT00940000160987 #10	ENSGT00390000016537 #11	ENSGT00940000158797 #12	ENSGT00940000154043.A #13	ENSGT00390000006287 #14	ENSGT00390000004067 #15	ENSGT00390000005742 #16	ENSGT00940000155841 #18	ENSGT00390000009902.h	ENSGT00390000008565.a #19	ENSGT00390000013112 #20	ENSGT01060000248556.A.a.a.a #21	ENSGT00390000011500 #22	ENSGT00900000141021.b.a #23	ENSGT00390000008371.b #24	ENSGT00390000006784 #25	ENSGT00940000161643	ENSGT00390000011980.b.b #26	ENSGT00950000182888.a.a.a.j.a #27	ENSGT00950000182888.a.a.a.j.b #28	ENSGT00390000009787.a #29	ENSGT00940000158829 #30	ENSGT00950000183047.d #31	ENSGT00940000160451 #32	ENSGT00940000154645.B	ENSGT00390000004524 #34	ENSGT00940000156744.b #35	ENSGT00940000156744.a #35
Wallaby	MODERN SPECIES	2786																ENSMEUG00000002556 #22	IER5L (ENSMEUG00000002566) #23	ENSMEUG00000002577
Diprotodontia_a	ANCESTRAL SPECIES	5	ENSGT00940000156902 #7	ENSGT00530000063187.A #8	ENSGT00940000158674 #9	ENSGT00940000160987 #10	ENSGT00390000016537 #11	ENSGT00940000158797 #12	ENSGT00940000154043.A #13	ENSGT00390000006287 #14	ENSGT00390000004067 #15	ENSGT00390000005742 #16	ENSGT00940000155841 #18	ENSGT00390000009902.h	ENSGT00390000008565.a #19	ENSGT00390000013112 #20	ENSGT01060000248556.A.a.a.a #21	ENSGT00390000011500 #22	ENSGT00900000141021.b.a #23	ENSGT00390000008371.b #24	ENSGT00390000006784 #25	ENSGT00940000161643	ENSGT00390000011980.b.b #26	ENSGT00950000182888.a.a.a.j.a #27	ENSGT00950000182888.a.a.a.j.b #28	ENSGT00390000009787.a #29	ENSGT00940000158829 #30	ENSGT00950000183047.d #31	ENSGT00940000160451 #32	ENSGT00940000154645.B	ENSGT00390000004524 #34	ENSGT00940000156744.b #35	ENSGT00940000156744.a #35
koala	MODERN SPECIES	161	PKN3 (ENSPCIG00000030107)	ZER1 (ENSPCIG00000030111) #8	TBC1D13 (ENSPCIG00000030114) #9	ENDOG (ENSPCIG00000030115) #10	SPOUT1 (ENSPCIG00000030118) #11	KYAT1 (ENSPCIG00000030121) #12	LRRC8A (ENSPCIG00000008130) #13	ENSPCIG00000030128 #14	DOLK (ENSPCIG00000030139) #15	NUP188 (ENSPCIG00000030144) #16	SH3GLB2 (ENSPCIG00000030159) #18	ENSPCIG00000030173	MIGA2 (ENSPCIG00000031019) #19	DOLPP1 (ENSPCIG00000034416) #20	CRAT (ENSPCIG00000030187) #21	PTPA (ENSPCIG00000030192) #22	ENSPCIG00000033083 #23
Common wonbat	MODERN SPECIES	1030	PKN3 (ENSVURG00010013394)	ZDHHC12 (ENSVURG00010013384) #7	ZER1 (ENSVURG00010013363) #8	TBC1D13 (ENSVURG00010013333) #9	ENDOG (ENSVURG00010013322) #10	SPOUT1 (ENSVURG00010013316) #11	KYAT1 (ENSVURG00010013300) #12	LRRC8A (ENSVURG00010013287) #13	PHYHD1 (ENSVURG00010013281) #14	DOLK (ENSVURG00010013275) #15	NUP188 (ENSVURG00010013249) #16	SH3GLB2 (ENSVURG00010013201) #18	MIGA2 (ENSVURG00010013177) #19	DOLPP1 (ENSVURG00010013163) #20	CRAT (ENSVURG00010013140) #21	PTPA (ENSVURG00010013082) #22	IER5L (ENSVURG00010013067) #23	NTMT1 (ENSVURG00010013035) #24	ASB6 (ENSVURG00010013022) #25	PRRX2 (ENSVURG00010012991)	ENSVURG00010012980 #26	TOR1B (ENSVURG00010012974) #27	TOR1A (ENSVURG00010012967) #28	ENSVURG00010012950 #29	USP20 (ENSVURG00010012929) #30	FNBP1 (ENSVURG00010012874) #31	GPR107 (ENSVURG00010012853) #32	NCS1 (ENSVURG00010012846)	ASS1 (ENSVURG00010012769) #34	ENSVURG00010012765 #35	PRDM12 (ENSVURG00010012758) #36
Tasmanian devil	MODERN SPECIES	1	PKN3 (ENSSHAG00000018824)	ZDHHC12 (ENSSHAG00000024938) #7	ZER1 (ENSSHAG00000018831) #8	TBC1D13 (ENSSHAG00000029784) #9	ENDOG (ENSSHAG00000029467) #10	SPOUT1 (ENSSHAG00000018857) #11	KYAT1 (ENSSHAG00000018862) #12	LRRC8A (ENSSHAG00000018882) #13	PHYHD1 (ENSSHAG00000028077) #14	NUP188 (ENSSHAG00000024098) #16	DOLK (ENSSHAG00000018894) #15	SH3GLB2 (ENSSHAG00000018901) #18	MIGA2 (ENSSHAG00000018913) #19	DOLPP1 (ENSSHAG00000018920) #20	CRAT (ENSSHAG00000018925) #21	PTPA (ENSSHAG00000000348) #22	IER5L (ENSSHAG00000030588) #23	NTMT1 (ENSSHAG00000010773) #24	ASB6 (ENSSHAG00000010852) #25	PRRX2 (ENSSHAG00000026808)	PTGES (ENSSHAG00000021077) #26	TOR1B (ENSSHAG00000027080) #27	ENSSHAG00000012313 #28	USP20 (ENSSHAG00000012417) #30	FNBP1 (ENSSHAG00000032090) #31	GPR107 (ENSSHAG00000013610) #32	ENSSHAG00000029345 #33	HMCN2 (ENSSHAG00000014551)	ASS1 (ENSSHAG00000015158) #34	FUBP3 (ENSSHAG00000015689) #35	PRDM12 (ENSSHAG00000028206) #36
Platypus	MODERN SPECIES	15	ZER1 (ENSOANG00000041420) #8	TBC1D13 (ENSOANG00000044821) #9	ENDOG (ENSOANG00000038236) #10	SPOUT1 (ENSOANG00000003336) #11	KYAT1 (ENSOANG00000003335) #12	LRRC8A (ENSOANG00000014621) #13	ENSOANG00000019923 #14	ENSOANG00000050711 #14	ENSOANG00000040329	DOLK (ENSOANG00000043436) #15	ENSOANG00000036710 #14	NUP188 (ENSOANG00000005920) #16	CRAT (ENSOANG00000048315) #21	MIGA2 (ENSOANG00000007740) #19	DOLPP1 (ENSOANG00000013511) #20	PTPA (ENSOANG00000008240) #22	IER5L (ENSOANG00000039499) #23	NTMT1 (ENSOANG00000038659) #24	ASB6 (ENSOANG00000048520) #25	ENSOANG00000047721	PTGES (ENSOANG00000040627) #26	TOR1B (ENSOANG00000002550) #27	TOR1A (ENSOANG00000037291) #28	C9orf78 (ENSOANG00000037333) #29	USP20 (ENSOANG00000002553) #30	FNBP1 (ENSOANG00000002554) #31	GPR107 (ENSOANG00000002555) #32	NCS1 (ENSOANG00000001037)	ENSOANG00000001040	ASS1 (ENSOANG00000001041) #34	FUBP3 (ENSOANG00000001042) #35
Sauria	ANCESTRAL SPECIES	33	ENSGT00940000177919	ENSGT00940000156902 #7	ENSGT00530000063187.A #8	ENSGT00940000158674 #9	ENSGT00940000160987 #10	ENSGT00390000016537 #11	ENSGT00940000158797 #12	ENSGT00940000154043.A #13	ENSGT00390000006287 #14	ENSGT00390000004067 #15	ENSGT00390000005742 #16	ENSGT00940000155841 #18	ENSGT00390000008565.a #19	ENSGT00390000013112 #20	ENSGT01060000248556.A.a.a.a #21	ENSGT00390000011500 #22	ENSGT00900000141021.b.a #23	ENSGT00390000008371.b #24	ENSGT00390000006784 #25	ENSGT00940000161643	ENSGT00390000011980.b.b #26	ENSGT00950000182888.a.a.a.j.a #27	ENSGT00950000182888.a.a.a.j.b #28	ENSGT00390000009787 #29	ENSGT00940000158829 #30	ENSGT00950000183047.d #31	ENSGT00940000160451 #32	ENSGT00940000163010 #33	ENSGT00940000162328	ENSGT00960000189405	ENSGT00940000154645.B
Archelosauria	ANCESTRAL SPECIES	32		ENSGT00940000156902 #7	ENSGT00530000063187.A #8	ENSGT00940000158674 #9	ENSGT00940000160987 #10	ENSGT00390000016537 #11	ENSGT00940000158797 #12	ENSGT00940000154043.A #13	ENSGT00390000006287 #14	ENSGT00390000004067 #15	ENSGT00390000005742 #16	ENSGT00940000155841 #18	ENSGT00390000008565.a #19	ENSGT00390000013112 #20	ENSGT01060000248556.A.a.a.a #21	ENSGT00390000011500 #22	ENSGT00900000141021.b.a #23	ENSGT00390000008371.b #24	ENSGT00390000006784 #25	ENSGT00940000161643	ENSGT00390000011980.b.b #26	ENSGT00950000182888.a.a.a.i ##28	ENSGT00950000182888.a.a.a.j.a #27	ENSGT00950000182888.a.a.a.j.b #28	ENSGT00390000009787 #29	ENSGT00940000158829 #30	ENSGT00950000183047.d #31	ENSGT00940000160451 #32	ENSGT00940000163010 #33	ENSGT00940000154645.B	ENSGT00940000162328
Archosauria	ANCESTRAL SPECIES	25	ENSGT00940000154990	ENSGT00940000156902 #7	ENSGT00530000063187.A #8	ENSGT00940000158674 #9	ENSGT00940000160987 #10	ENSGT00390000016537 #11	ENSGT00940000158797 #12	ENSGT00940000154043.A #13	ENSGT00390000006287 #14	ENSGT00390000004067 #15	ENSGT00390000005742 #16	ENSGT00940000155841 #18	ENSGT00390000008565.a #19	ENSGT00390000013112 #20	ENSGT01060000248556.A.a.a.a #21	ENSGT00390000011500 #22	ENSGT00900000141021.b.a #23	ENSGT00390000008371.b #24	ENSGT00390000006784 #25	ENSGT00940000161643	ENSGT00390000011980.b.b #26	ENSGT00950000182888.a.a.a.i ##28	ENSGT00950000182888.a.a.a.j.a #27	ENSGT00950000182888.a.a.a.j.b #28	ENSGT00390000009787 #29	ENSGT00940000158829 #30	ENSGT00950000183047.d #31	ENSGT00940000160451 #32	ENSGT00940000163010 #33	ENSGT00940000154645.B	ENSGT00940000162328
Aves	ANCESTRAL SPECIES	21	ENSGT00940000154990	ENSGT00940000156902 #7	ENSGT00530000063187.A #8	ENSGT00940000158674 #9	ENSGT00940000160987 #10	ENSGT00390000016537 #11	ENSGT00940000158797 #12	ENSGT00940000154043.A #13	ENSGT00390000006287 #14	ENSGT00390000004067 #15	ENSGT00390000005742 #16	ENSGT00940000155841 #18	ENSGT00390000008565.a #19	ENSGT00390000013112 #20	ENSGT01060000248556.A.a.a.a #21	ENSGT00390000011500 #22	ENSGT00900000141021.b.a #23	ENSGT00390000008371.b #24	ENSGT00390000006784 #25	ENSGT00940000161643	ENSGT00390000011980.b.b #26	ENSGT00950000182888.a.a.a.i ##28	ENSGT00950000182888.a.a.a.j.a #27	ENSGT00950000182888.a.a.a.j.b #28	ENSGT00390000009787 #29	ENSGT00940000158829 #30	ENSGT00950000183047.d #31	ENSGT00940000160451 #32	ENSGT00940000154645.B	ENSGT00940000162328	ENSGT00960000189405
Neognathae	ANCESTRAL SPECIES	20	ENSGT00940000154990	ENSGT00940000156902 #7	ENSGT00530000063187.A #8	ENSGT00940000158674 #9	ENSGT00940000160987 #10	ENSGT00390000016537 #11	ENSGT00940000158797 #12	ENSGT00940000154043.A #13	ENSGT00390000006287 #14	ENSGT00390000004067 #15	ENSGT00390000005742 #16	ENSGT00940000155841 #18	ENSGT00390000008565.a #19	ENSGT00390000013112 #20	ENSGT01060000248556.A.a.a.a #21	ENSGT00390000011500 #22	ENSGT00900000141021.b.a #23	ENSGT00390000008371.b #24	ENSGT00390000006784 #25	ENSGT00940000161643	ENSGT00390000011980.b.b #26	ENSGT00950000182888.a.a.a.i ##28	ENSGT00950000182888.a.a.a.j.a #27	ENSGT00950000182888.a.a.a.j.b #28	ENSGT00390000009787 #29	ENSGT00940000158829 #30	ENSGT00950000183047.d #31	ENSGT00940000160451 #32	ENSGT00940000154645.B	ENSGT00940000162328	ENSGT00960000189405
Neognathae_b	ANCESTRAL SPECIES	21	ENSGT00940000154990	ENSGT00940000156902 #7	ENSGT00530000063187.A #8	ENSGT00940000158674 #9	ENSGT00940000160987 #10	ENSGT00390000016537 #11	ENSGT00940000158797 #12	ENSGT00940000154043.A #13	ENSGT00390000006287 #14	ENSGT00390000004067 #15	ENSGT00390000005742 #16	ENSGT00940000155841 #18	ENSGT00390000008565.a #19	ENSGT00390000013112 #20	ENSGT01060000248556.A.a.a.a #21	ENSGT00390000011500 #22	ENSGT00900000141021.b.a #23	ENSGT00390000008371.b #24	ENSGT00390000006784 #25	ENSGT00940000161643	ENSGT00390000011980.b.b #26	ENSGT00950000182888.a.a.a.i ##28	ENSGT00950000182888.a.a.a.j.a #27	ENSGT00950000182888.a.a.a.j.b #28	ENSGT00390000009787 #29	ENSGT00940000158829 #30	ENSGT00950000183047.d #31	ENSGT00940000160451 #32	ENSGT00940000163010 #33	ENSGT00390000004524 #34	ENSGT00940000156744 #35
Passeriformes	ANCESTRAL SPECIES	20	ENSGT00940000154990	ENSGT00940000156902 #7	ENSGT00530000063187.A #8	ENSGT00940000158674 #9	ENSGT00940000160987 #10	ENSGT00390000016537 #11	ENSGT00940000158797 #12	ENSGT00940000154043.A #13	ENSGT00390000006287 #14	ENSGT00390000004067 #15	ENSGT00390000005742 #16	ENSGT00940000155841 #18	ENSGT00390000008565.a #19	ENSGT00390000013112 #20	ENSGT01060000248556.A.a.a.a #21	ENSGT00390000011500 #22	ENSGT00900000141021.b.a #23	ENSGT00390000008371.b #24	ENSGT00390000006784 #25	ENSGT00940000161643	ENSGT00390000011980.b.b #26	ENSGT00950000182888.a.a.a.j.a #27	ENSGT00950000182888.a.a.a.j.b #28	ENSGT00390000009787 #29	ENSGT00940000158829 #30	ENSGT00950000183047.d #31	ENSGT00940000160451 #32	ENSGT00940000163010 #33	ENSGT00390000004524 #34	ENSGT00940000156744 #35	ENSGT00940000161616 #36
Great tit	MODERN SPECIES	7	ENSPMJG00000009473	ZDHHC12 (ENSPMJG00000009472) #7	ZER1 (ENSPMJG00000009471) #8	TBC1D13 (ENSPMJG00000009470) #9	ENDOG (ENSPMJG00000009468) #10	SPOUT1 (ENSPMJG00000009467) #11	KYAT1 (ENSPMJG00000009466) #12	LRRC8A (ENSPMJG00000009465) #13	PHYHD1 (ENSPMJG00000009464) #14	DOLK (ENSPMJG00000009463) #15	NUP188 (ENSPMJG00000007061) #16	SH3GLB2 (ENSPMJG00000006954) #18	MIGA2 (ENSPMJG00000006950) #19	DOLPP1 (ENSPMJG00000006949) #20	CRAT (ENSPMJG00000006947) #21	PTPA (ENSPMJG00000006946) #22	NTMT1 (ENSPMJG00000006942) #24	ASB6 (ENSPMJG00000006940) #25	PRRX2 (ENSPMJG00000006939)	PTGES (ENSPMJG00000006938) #26	TOR1B (ENSPMJG00000006937) #27	TOR1A (ENSPMJG00000006936) #28	C9orf78 (ENSPMJG00000006935) #29	USP20 (ENSPMJG00000006933) #30	FNBP1 (ENSPMJG00000006925) #31	GPR107 (ENSPMJG00000006920) #32	ENSPMJG00000006913 #33	ASS1 (ENSPMJG00000006879) #34	FUBP3 (ENSPMJG00000006848) #35	PRDM12 (ENSPMJG00000006843) #36	EXOSC2 (ENSPMJG00000006842) #37
Passeriformes_d	ANCESTRAL SPECIES	20	ENSGT00940000154990	ENSGT00940000156902 #7	ENSGT00530000063187.A #8	ENSGT00940000158674 #9	ENSGT00940000160987 #10	ENSGT00390000016537 #11	ENSGT00940000158797 #12	ENSGT00940000154043.A #13	ENSGT00390000006287 #14	ENSGT00390000004067 #15	ENSGT00390000005742 #16	ENSGT00940000155841 #18	ENSGT00390000008565.a #19	ENSGT00390000013112 #20	ENSGT01060000248556.A.a.a.a #21	ENSGT00390000011500 #22	ENSGT00900000141021.b.a #23	ENSGT00390000008371.b.b #24	ENSGT00390000006784 #25	ENSGT00940000161643	ENSGT00390000011980.b.b #26	ENSGT00950000182888.a.a.a.j.a #27	ENSGT00950000182888.a.a.a.j.b #28	ENSGT00390000009787 #29	ENSGT00940000158829 #30	ENSGT00950000183047.d #31	ENSGT00940000160451 #32	ENSGT00940000163010 #33	ENSGT00390000004524 #34	ENSGT00940000156744 #35	ENSGT00940000161616 #36
Flycatcher	MODERN SPECIES	7	ZDHHC12 (ENSFALG00000001415) #7	ZER1 (ENSFALG00000001417) #8	TBC1D13 (ENSFALG00000001419) #9	ENDOG (ENSFALG00000001421) #10	SPOUT1 (ENSFALG00000028767) #11	KYAT1 (ENSFALG00000001422) #12	LRRC8A (ENSFALG00000001423) #13	PHYHD1 (ENSFALG00000001424) #14	DOLK (ENSFALG00000015268) #15	ENSFALG00000024290 #16	NUP188 (ENSFALG00000001425) #16	SH3GLB2 (ENSFALG00000001426) #18	MIGA2 (ENSFALG00000001427) #19	DOLPP1 (ENSFALG00000001428) #20	CRAT (ENSFALG00000001429) #21	PTPA (ENSFALG00000001430) #22	ENSFALG00000027410	ASB6 (ENSFALG00000001431) #25	NTMT1 (ENSFALG00000001432) #24	PRRX2 (ENSFALG00000001433)	PTGES (ENSFALG00000001434) #26	TOR1B (ENSFALG00000001435) #27	TOR1A (ENSFALG00000028829) #28	C9orf78 (ENSFALG00000001437) #29	USP20 (ENSFALG00000001438) #30	FNBP1 (ENSFALG00000001439) #31	GPR107 (ENSFALG00000001440) #32	ENSFALG00000026470	ENSFALG00000024610	ENSFALG00000023533	ENSFALG00000027470
Passeriformes_g	ANCESTRAL SPECIES	21	ENSGT00940000154990	ENSGT00940000156902 #7	ENSGT00530000063187.A #8	ENSGT00940000158674 #9	ENSGT00940000160987 #10	ENSGT00390000016537 #11	ENSGT00940000158797 #12	ENSGT00940000154043.A #13	ENSGT00390000006287 #14	ENSGT00390000004067 #15	ENSGT00390000005742 #16	ENSGT00940000155841 #18	ENSGT00390000008565.a #19	ENSGT00390000013112 #20	ENSGT01060000248556.A.a.a.a #21	ENSGT00390000011500 #22	ENSGT00900000141021.b.a #23	ENSGT00390000008371.b.b #24	ENSGT00390000006784 #25	ENSGT00940000161643	ENSGT00390000011980.b.b #26	ENSGT00950000182888.a.a.a.j.a #27	ENSGT00950000182888.a.a.a.j.b #28	ENSGT00390000009787 #29	ENSGT00940000158829 #30	ENSGT00950000183047.d #31	ENSGT00940000160451 #32	ENSGT00940000163010 #33	ENSGT00390000004524 #34	ENSGT00940000156744 #35	ENSGT00940000161616 #36
Medium ground finch	MODERN SPECIES	32	ZDHHC12 (ENSGFOG00000011048) #7	ZER1 (ENSGFOG00000011036) #8	TBC1D13 (ENSGFOG00000011027) #9	ENDOG (ENSGFOG00000011016) #10	SPOUT1 (ENSGFOG00000011003) #11	KYAT1 (ENSGFOG00000010993) #12	LRRC8A (ENSGFOG00000010987) #13	PHYHD1 (ENSGFOG00000010973) #14	DOLK (ENSGFOG00000010962) #15	ENSGFOG00000010960 #16	NUP188 (ENSGFOG00000010936) #16	SH3GLB2 (ENSGFOG00000010898) #18	MIGA2 (ENSGFOG00000010865) #19	DOLPP1 (ENSGFOG00000010849) #20	CRAT (ENSGFOG00000010821) #21	PTPA (ENSGFOG00000010805) #22	ENSGFOG00000010794 #24	ENSGFOG00000010785 #24	ASB6 (ENSGFOG00000010774) #25	PRRX2 (ENSGFOG00000010767)	PTGES (ENSGFOG00000010758) #26	TOR1B (ENSGFOG00000010752) #27	TOR1A (ENSGFOG00000010745) #28	C9orf78 (ENSGFOG00000010738) #29	USP20 (ENSGFOG00000010723) #30	FNBP1 (ENSGFOG00000010678) #31	GPR107 (ENSGFOG00000010651) #32	ENSGFOG00000010643 #33	ENSGFOG00000010639	ENSGFOG00000010636	ASS1 (ENSGFOG00000010624) #34
Passeroidea	ANCESTRAL SPECIES	21	ENSGT00940000154990	ENSGT00940000156902 #7	ENSGT00530000063187.A #8	ENSGT00940000158674 #9	ENSGT00940000160987 #10	ENSGT00390000016537 #11	ENSGT00940000158797 #12	ENSGT00940000154043.A #13	ENSGT00390000006287 #14	ENSGT00390000004067 #15	ENSGT00390000005742 #16	ENSGT00940000155841 #18	ENSGT00390000008565.a #19	ENSGT00390000013112 #20	ENSGT01060000248556.A.a.a.a #21	ENSGT00390000011500 #22	ENSGT00900000141021.b.a #23	ENSGT00390000008371.b.b #24	ENSGT00390000006784 #25	ENSGT00940000161643	ENSGT00390000011980.b.b #26	ENSGT00950000182888.a.a.a.j.a #27	ENSGT00950000182888.a.a.a.j.b #28	ENSGT00390000009787 #29	ENSGT00940000158829 #30	ENSGT00950000183047.d #31	ENSGT00940000160451 #32	ENSGT00940000163010 #33	ENSGT00390000004524 #34	ENSGT00940000156744 #35	ENSGT00940000161616 #36
Common canary	MODERN SPECIES	22	ZDHHC12 (ENSSCAG00000005137) #7	ZER1 (ENSSCAG00000005129) #8	TBC1D13 (ENSSCAG00000005124) #9	ENDOG (ENSSCAG00000005120) #10	SPOUT1 (ENSSCAG00000005117) #11	KYAT1 (ENSSCAG00000005111) #12	LRRC8A (ENSSCAG00000005107) #13	PHYHD1 (ENSSCAG00000005104) #14	DOLK (ENSSCAG00000005101) #15	NUP188 (ENSSCAG00000005083) #16	SH3GLB2 (ENSSCAG00000005069) #18	MIGA2 (ENSSCAG00000005060) #19	ENSSCAG00000005055	DOLPP1 (ENSSCAG00000005034) #20	CRAT (ENSSCAG00000005022) #21	PTPA (ENSSCAG00000005005) #22	NTMT1 (ENSSCAG00000004995) #24	ASB6 (ENSSCAG00000004989) #25	PRRX2 (ENSSCAG00000004986)	PTGES (ENSSCAG00000004981) #26	TOR1B (ENSSCAG00000004972) #27	TOR1A (ENSSCAG00000004965) #28	C9orf78 (ENSSCAG00000004957) #29	USP20 (ENSSCAG00000004943) #30	FNBP1 (ENSSCAG00000004913) #31	GPR107 (ENSSCAG00000004896) #32	ENSSCAG00000004893 #33	ASS1 (ENSSCAG00000004836) #34	ENSSCAG00000004830	FUBP3 (ENSSCAG00000004564) #35	PRDM12 (ENSSCAG00000004509) #36
Zebra finch	MODERN SPECIES	8	PKN1 (ENSTGUG00000004079)	ZDHHC12 (ENSTGUG00000019700) #7	ZER1 (ENSTGUG00000004153) #8	TBC1D13 (ENSTGUG00000004176) #9	ENDOG (ENSTGUG00000004197) #10	SPOUT1 (ENSTGUG00000004201) #11	KYAT1 (ENSTGUG00000004212) #12	LRRC8A (ENSTGUG00000004233) #13	PHYHD1 (ENSTGUG00000004236) #14	DOLK (ENSTGUG00000004256) #15	NUP188 (ENSTGUG00000004258) #16	SH3GLB2 (ENSTGUG00000004316) #18	MIGA2 (ENSTGUG00000004339) #19	DOLPP1 (ENSTGUG00000004356) #20	CRAT (ENSTGUG00000004362) #21	PTPA (ENSTGUG00000025205) #22	IER5L (ENSTGUG00000004425) #23	NTMT1 (ENSTGUG00000004430) #24	ASB6 (ENSTGUG00000004412) #25	PRRX2 (ENSTGUG00000027949)	PTGES (ENSTGUG00000028287) #26	TOR1B (ENSTGUG00000004451) #27	TOR1A (ENSTGUG00000004463) #28	USP20 (ENSTGUG00000004503) #30	C9orf78 (ENSTGUG00000004486) #29	FNBP1 (ENSTGUG00000004545) #31	GPR107 (ENSTGUG00000004567) #32	ENSTGUG00000022805	ASS1 (ENSTGUG00000004656) #34	FUBP3 (ENSTGUG00000004662) #35	PRDM12 (ENSTGUG00000004692) #36
Neognathae_c	ANCESTRAL SPECIES	25	ENSGT00940000154990	ENSGT00940000156902 #7	ENSGT00530000063187.A #8	ENSGT00940000158674 #9	ENSGT00940000160987 #10	ENSGT00390000016537 #11	ENSGT00940000158797 #12	ENSGT00940000154043.A #13	ENSGT00390000006287 #14	ENSGT00390000004067 #15	ENSGT00390000005742 #16	ENSGT00940000155841 #18	ENSGT00390000008565.a #19	ENSGT00390000013112 #20	ENSGT01060000248556.A.a.a.a #21	ENSGT00390000011500 #22	ENSGT00900000141021.b.a #23	ENSGT00390000008371.b #24	ENSGT00390000006784 #25	ENSGT00940000161643	ENSGT00390000011980.b.b #26	ENSGT00950000182888.a.a.a.i ##28	ENSGT00950000182888.a.a.a.j.a #27	ENSGT00950000182888.a.a.a.j.b #28	ENSGT00390000009787 #29	ENSGT00940000158829 #30	ENSGT00950000183047.d #31	ENSGT00940000160451 #32	ENSGT00940000154645.B	ENSGT00940000162328	ENSGT01030000238169
Kakapo	MODERN SPECIES	9	ENSSHBG00005012668	ZDHHC12 (ENSSHBG00005012414) #7	ZER1 (ENSSHBG00005012394) #8	TBC1D13 (ENSSHBG00005012377) #9	ENDOG (ENSSHBG00005012358) #10	SPOUT1 (ENSSHBG00005012342) #11	KYAT1 (ENSSHBG00005012305) #12	LRRC8A (ENSSHBG00005012289) #13	PHYHD1 (ENSSHBG00005012261) #14	DOLK (ENSSHBG00005012238) #15	NUP188 (ENSSHBG00005012197) #16	SH3GLB2 (ENSSHBG00005012050) #18	MIGA2 (ENSSHBG00005011995) #19	DOLPP1 (ENSSHBG00005011975) #20	CRAT (ENSSHBG00005011945) #21	PTPA (ENSSHBG00005011924) #22	IER5L (ENSSHBG00005011915) #23	NTMT1 (ENSSHBG00005011896) #24	ASB6 (ENSSHBG00005011877) #25	PRRX2 (ENSSHBG00005011856)	PTGES (ENSSHBG00005011832) #26	TOR1B (ENSSHBG00005011821) #27	TOR1A (ENSSHBG00005011800) #28	C9orf78 (ENSSHBG00005011777) #29	USP20 (ENSSHBG00005011734) #30	FNBP1 (ENSSHBG00005011684) #31	GPR107 (ENSSHBG00005011641) #32	NCS1 (ENSSHBG00005011616)	ENSSHBG00005011600	ENSSHBG00005011579	ASS1 (ENSSHBG00005011556) #34
Golden eagle	MODERN SPECIES	16	ZDHHC12 (ENSACCG00020012116) #7	ZER1 (ENSACCG00020012155) #8	TBC1D13 (ENSACCG00020012196) #9	ENDOG (ENSACCG00020012216) #10	SPOUT1 (ENSACCG00020012243) #11	KYAT1 (ENSACCG00020012286) #12	LRRC8A (ENSACCG00020012328) #13	PHYHD1 (ENSACCG00020012351) #14	DOLK (ENSACCG00020012372) #15	ENSACCG00020012391 #16	NUP188 (ENSACCG00020012426) #16	SH3GLB2 (ENSACCG00020012549) #18	MIGA2 (ENSACCG00020012627) #19	DOLPP1 (ENSACCG00020012663) #20	CRAT (ENSACCG00020012704) #21	PTPA (ENSACCG00020012749) #22	ENSACCG00020012771 #23	NTMT1 (ENSACCG00020012782) #24	ASB6 (ENSACCG00020012806) #25	PRRX2 (ENSACCG00020012829)	PTGES (ENSACCG00020012851) #26	ENSACCG00020012865 ##28	TOR1B (ENSACCG00020012883) #27	TOR1A (ENSACCG00020012903) #28	C9orf78 (ENSACCG00020012921) #29	USP20 (ENSACCG00020012961) #30	FNBP1 (ENSACCG00020013087) #31	GPR107 (ENSACCG00020013158) #32	NCS1 (ENSACCG00020013184)	ENSACCG00020013275	ENSACCG00020013314
Galloanserae	ANCESTRAL SPECIES	22	ENSGT00940000154990	ENSGT00940000156902 #7	ENSGT00530000063187.A #8	ENSGT00940000158674 #9	ENSGT00940000160987 #10	ENSGT00390000016537 #11	ENSGT00940000158797 #12	ENSGT00940000154043.A #13	ENSGT00390000006287 #14	ENSGT00390000004067 #15	ENSGT00390000005742 #16	ENSGT00940000155841 #18	ENSGT00390000008565.a #19	ENSGT00390000013112 #20	ENSGT01060000248556.A.a.a.a #21	ENSGT00390000011500 #22	ENSGT00900000141021.b.a #23	ENSGT00390000008371.b #24	ENSGT00390000006784 #25	ENSGT00940000161643	ENSGT00390000011980.b.b #26	ENSGT00950000182888.a.a.a.i ##28	ENSGT00950000182888.a.a.a.j.a #27	ENSGT00950000182888.a.a.a.j.b #28	ENSGT00390000009787 #29	ENSGT00940000158829 #30	ENSGT00950000183047.d #31	ENSGT00940000160451 #32	ENSGT00940000163010 #33	ENSGT00390000004524 #34	ENSGT00940000156744 #35
Phasianidae	ANCESTRAL SPECIES	20	ENSGT00940000154990	ENSGT00940000156902 #7	ENSGT00530000063187.A #8	ENSGT00940000158674 #9	ENSGT00940000160987 #10	ENSGT00390000016537 #11	ENSGT00940000158797 #12	ENSGT00940000154043.A #13	ENSGT00390000006287 #14	ENSGT00390000004067 #15	ENSGT00390000005742 #16	ENSGT00940000155841 #18	ENSGT00390000008565.a #19	ENSGT00390000013112 #20	ENSGT01060000248556.A.a.a.a #21	ENSGT00390000011500 #22	ENSGT00900000141021.b.a #23	ENSGT00390000008371.b #24	ENSGT00390000006784 #25	ENSGT00940000161643	ENSGT00390000011980.b.b #26	ENSGT00950000182888.a.a.a.i ##28	ENSGT00950000182888.a.a.a.j.a #27	ENSGT00950000182888.a.a.a.j.b #28	ENSGT00390000009787 #29	ENSGT00940000158829 #30	ENSGT00950000183047.d #31	ENSGT00940000160451 #32	ENSGT00940000163010 #33	ENSGT00390000004524 #34	ENSGT00940000156744 #35
Phasianidae_b	ANCESTRAL SPECIES	19	ENSGT00940000154990	ENSGT00940000156902 #7	ENSGT00530000063187.A #8	ENSGT00940000158674 #9	ENSGT00940000160987 #10	ENSGT00390000016537 #11	ENSGT00940000158797 #12	ENSGT00940000154043.A #13	ENSGT00390000006287 #14	ENSGT00390000004067 #15	ENSGT00390000005742 #16	ENSGT00940000155841 #18	ENSGT00390000008565.a #19	ENSGT00390000013112 #20	ENSGT01060000248556.A.a.a.a #21	ENSGT00390000011500 #22	ENSGT00900000141021.b.a #23	ENSGT00390000008371.b #24	ENSGT00390000006784 #25	ENSGT00940000161643	ENSGT00390000011980.b.b #26	ENSGT00950000182888.a.a.a.i ##28	ENSGT00950000182888.a.a.a.j.a #27	ENSGT00950000182888.a.a.a.j.b #28	ENSGT00390000009787 #29	ENSGT00940000158829 #30	ENSGT00950000183047.d #31	ENSGT00940000160451 #32	ENSGT00940000163010 #33	ENSGT00390000004524 #34	ENSGT00940000156744 #35
Chicken	MODERN SPECIES	8	PKN3 (ENSGALG00010028565)	ZDHHC12 (ENSGALG00010028566) #7	ZER1 (ENSGALG00010028569) #8	TBC1D13 (ENSGALG00010028572) #9	ENDOG (ENSGALG00010028574) #10	SPOUT1 (ENSGALG00010028578) #11	KYAT1 (ENSGALG00010028582) #12	LRRC8A (ENSGALG00010028584) #13	PHYHD1 (ENSGALG00010028589) #14	DOLK (ENSGALG00010028593) #15	NUP188 (ENSGALG00010028597) #16	SH3GLB2 (ENSGALG00010028603) #18	MIGA2 (ENSGALG00010028608) #19	DOLPP1 (ENSGALG00010028618) #20	CRAT (ENSGALG00010028626) #21	PTPA (ENSGALG00010028658) #22	IER5L (ENSGALG00010028005) #23	NTMT1 (ENSGALG00010028008) #24	ASB6 (ENSGALG00010028010) #25	PRRX2 (ENSGALG00010028012)	PTGES (ENSGALG00010028488) #26	ENSGALG00010028489 ##28	TOR1B (ENSGALG00010028491) #27	TOR1A (ENSGALG00010028493) #28	C17H9orf78 (ENSGALG00010028498) #29	USP20 (ENSGALG00010028501) #30	FNBP1 (ENSGALG00010028514) #31	GPR107 (ENSGALG00010028536) #32	NCS1 (ENSGALG00010028551) #33	ASS1 (ENSGALG00010027383) #34	FUBP3 (ENSGALG00010028889) #35
Turkey	MODERN SPECIES	10	ENSMGAG00000004448	ZDHHC12 (ENSMGAG00000004548) #7	ZER1 (ENSMGAG00000004629) #8	TBC1D13 (ENSMGAG00000004524) #9	ENDOG (ENSMGAG00000004558) #10	SPOUT1 (ENSMGAG00000004568) #11	KYAT1 (ENSMGAG00000004594) #12	LRRC8A (ENSMGAG00000004668) #13	PHYHD1 (ENSMGAG00000004680) #14	DOLK (ENSMGAG00000015779) #15	NUP188 (ENSMGAG00000004695) #16	SH3GLB2 (ENSMGAG00000004815) #18	MIGA2 (ENSMGAG00000004844) #19	DOLPP1 (ENSMGAG00000004883) #20	CRAT (ENSMGAG00000004898) #21	PTPA (ENSMGAG00000004950) #22	NTMT1 (ENSMGAG00000004980) #24	ASB6 (ENSMGAG00000005026) #25	PRRX2 (ENSMGAG00000005003)	PTGES (ENSMGAG00000017961) #26	ENSMGAG00000018656 ##28	TOR1B (ENSMGAG00000005072) #27	TOR1A (ENSMGAG00000005102) #28	C9orf78 (ENSMGAG00000005128) #29	USP20 (ENSMGAG00000005153) #30	FNBP1 (ENSMGAG00000005202) #31	GPR107 (ENSMGAG00000005222) #32	ENSMGAG00000005292 #33	ASS1 (ENSMGAG00000005305) #34	ENSMGAG00000005414	FUBP3 (ENSMGAG00000005342) #35
Japanese quail	MODERN SPECIES	8	ZDHHC12 (ENSCJPG00005020302) #7	ZER1 (ENSCJPG00005020303) #8	TBC1D13 (ENSCJPG00005020304) #9	ENDOG (ENSCJPG00005020305) #10	SPOUT1 (ENSCJPG00005020306) #11	KYAT1 (ENSCJPG00005020307) #12	LRRC8A (ENSCJPG00005020308) #13	PHYHD1 (ENSCJPG00005020309) #14	DOLK (ENSCJPG00005020310) #15	NUP188 (ENSCJPG00005020311) #16	SH3GLB2 (ENSCJPG00005020363) #18	MIGA2 (ENSCJPG00005020364) #19	ENSCJPG00005020366	ENSCJPG00005020367	CRAT (ENSCJPG00005020368) #21	PTPA (ENSCJPG00005020370) #22	NTMT1 (ENSCJPG00005020375) #24	ASB6 (ENSCJPG00005020376) #25	ENSCJPG00005020377	PRRX2 (ENSCJPG00005020378)	PTGES (ENSCJPG00005020379) #26	ENSCJPG00005020380 ##28	TOR1B (ENSCJPG00005020381) #27	TOR1A (ENSCJPG00005020382) #28	C9orf78 (ENSCJPG00005020383) #29	USP20 (ENSCJPG00005020384) #30	FNBP1 (ENSCJPG00005020409) #31	GPR107 (ENSCJPG00005000055) #32	ENSCJPG00005000098	NCS1 (ENSCJPG00005000105)	ASS1 (ENSCJPG00005000115) #34
Anatidae	ANCESTRAL SPECIES	13	ENSGT00940000154990	ENSGT00940000156902 #7	ENSGT00530000063187.A #8	ENSGT00940000158674 #9	ENSGT00940000160987 #10	ENSGT00390000016537 #11	ENSGT00940000158797 #12	ENSGT00940000154043.A #13	ENSGT00390000006287 #14	ENSGT00390000004067 #15	ENSGT00390000005742 #16	ENSGT00940000155841 #18	ENSGT00390000008565.a #19	ENSGT00390000013112 #20	ENSGT01060000248556.A.a.a.a #21	ENSGT00390000011500 #22	ENSGT00900000141021.b.a #23	ENSGT00390000008371.b #24	ENSGT00390000006784 #25	ENSGT00940000161643	ENSGT00390000011980.b.b #26	ENSGT00950000182888.a.a.a.i ##28	ENSGT00950000182888.a.a.a.j.a #27	ENSGT00390000009787 #29	ENSGT00940000158829 #30	ENSGT00950000183047.d #31	ENSGT00940000160451 #32	ENSGT00940000154645.B	ENSGT00960000189405	ENSGT00390000004524.t #34	ENSGT00940000156744 #35
Pink-footed goose	MODERN SPECIES	8	PKN1 (ENSABRG00000019253)	ZDHHC12 (ENSABRG00000019986) #7	ZER1 (ENSABRG00000020000) #8	TBC1D13 (ENSABRG00000020114) #9	ENDOG (ENSABRG00000020139) #10	SPOUT1 (ENSABRG00000020142) #11	KYAT1 (ENSABRG00000020163) #12	LRRC8A (ENSABRG00000020227) #13	PHYHD1 (ENSABRG00000020228) #14	DOLK (ENSABRG00000020229) #15	NUP188 (ENSABRG00000020273) #16	SH3GLB2 (ENSABRG00000020592) #18	MIGA2 (ENSABRG00000020634) #19	DOLPP1 (ENSABRG00000020672) #20	CRAT (ENSABRG00000020706) #21	PTPA (ENSABRG00000020753) #22	ENSABRG00000020756 #23	NTMT1 (ENSABRG00000020763) #24	ASB6 (ENSABRG00000020765) #25	PRRX2 (ENSABRG00000020766)	PTGES (ENSABRG00000020771) #26	ENSABRG00000020775 ##28	TOR1B (ENSABRG00000020777) #27	C9orf78 (ENSABRG00000020779) #29	USP20 (ENSABRG00000020788) #30	FNBP1 (ENSABRG00000020798) #31	GPR107 (ENSABRG00000020811) #32	NCS1 (ENSABRG00000020814)	ENSABRG00000020834	ENSABRG00000020840	ASS1 (ENSABRG00000020847) #34
Duck	MODERN SPECIES	8	ENSAPLG00000013093	ZDHHC12 (ENSAPLG00000012997) #7	ZER1 (ENSAPLG00000012789) #8	TBC1D13 (ENSAPLG00000004702) #9	ENDOG (ENSAPLG00000004952) #10	SPOUT1 (ENSAPLG00000005094) #11	KYAT1 (ENSAPLG00000005215) #12	LRRC8A (ENSAPLG00000005396) #13	PHYHD1 (ENSAPLG00000028351) #14	NUP188 (ENSAPLG00000005569) #16	SH3GLB2 (ENSAPLG00000006680) #18	MIGA2 (ENSAPLG00000006834) #19	ENSAPLG00000026375	ENSAPLG00000007140	CRAT (ENSAPLG00000007161) #21	PTPA (ENSAPLG00000007782) #22	NTMT1 (ENSAPLG00000008022) #24	ASB6 (ENSAPLG00000029087) #25	PTGES (ENSAPLG00000008242) #26	ENSAPLG00000021783 ##28	TOR1B (ENSAPLG00000018970) #27	C9orf78 (ENSAPLG00000008571) #29	USP20 (ENSAPLG00000008760) #30	FNBP1 (ENSAPLG00000009326) #31	GPR107 (ENSAPLG00000009595) #32	ENSAPLG00000023157	ENSAPLG00000029670	ENSAPLG00000018463	ENSAPLG00000021907 #34	FUBP3 (ENSAPLG00000011238) #35	ENSAPLG00000025815
African ostrich	MODERN SPECIES	971	ZDHHC12 (ENSSCUG00000017778) #7	ZER1 (ENSSCUG00000017779) #8	TBC1D13 (ENSSCUG00000017781) #9	SPOUT1 (ENSSCUG00000017782) #11	KYAT1 (ENSSCUG00000017783) #12	LRRC8A (ENSSCUG00000017784) #13	PHYHD1 (ENSSCUG00000017786) #14	DOLK (ENSSCUG00000017789) #15	NUP188 (ENSSCUG00000017791) #16	SH3GLB2 (ENSSCUG00000017793) #18	ENSSCUG00000017795 #18	MIGA2 (ENSSCUG00000017797) #19	ENSSCUG00000017801	DOLPP1 (ENSSCUG00000017804) #20	CRAT (ENSSCUG00000017807) #21	PTPA (ENSSCUG00000017811) #22	NTMT1 (ENSSCUG00000017816) #24	ASB6 (ENSSCUG00000017819) #25
Australian saltwater crocodile	MODERN SPECIES	44	PKN1 (ENSCPRG00005002282)	ZDHHC12 (ENSCPRG00005002358) #7	ZER1 (ENSCPRG00005002383) #8	TBC1D13 (ENSCPRG00005002492) #9	ENDOG (ENSCPRG00005002497) #10	SPOUT1 (ENSCPRG00005002500) #11	ENSCPRG00005002509 #12	LRRC8A (ENSCPRG00005002523) #13	PHYHD1 (ENSCPRG00005002530) #14	DOLK (ENSCPRG00005002539) #15	NUP188 (ENSCPRG00005002660) #16	SH3GLB2 (ENSCPRG00005003502) #18	MIGA2 (ENSCPRG00005003544) #19	DOLPP1 (ENSCPRG00005003644) #20	CRAT (ENSCPRG00005003698) #21	PTPA (ENSCPRG00005003805) #22	NTMT1 (ENSCPRG00005003831) #24	ASB6 (ENSCPRG00005003836) #25	PRRX2 (ENSCPRG00005003841)	PTGES (ENSCPRG00005003844) #26	ENSCPRG00005003849 ##28	TOR1B (ENSCPRG00005003853) #27	ENSCPRG00005003861 #28	ENSCPRG00005003866 #28	C9orf78 (ENSCPRG00005003869) #29	USP20 (ENSCPRG00005003875) #30	FNBP1 (ENSCPRG00005003896) #31	GPR107 (ENSCPRG00005003958) #32	ENSCPRG00005004059 #33	ENSCPRG00005004065	ENSCPRG00005004076
Cryptodira	ANCESTRAL SPECIES	33		ENSGT00940000156902 #7	ENSGT00530000063187.A #8	ENSGT00940000158674 #9	ENSGT00940000160987 #10	ENSGT00390000016537 #11	ENSGT00940000158797 #12	ENSGT00940000154043.A #13	ENSGT00390000006287 #14	ENSGT00390000004067 #15	ENSGT00390000005742 #16	ENSGT00940000155841 #18	ENSGT00390000008565.a #19	ENSGT00390000013112 #20	ENSGT01060000248556.A.a.a.a #21	ENSGT00390000011500 #22	ENSGT00900000141021.b.a #23	ENSGT00390000008371.b #24	ENSGT00390000006784 #25	ENSGT00940000161643	ENSGT00390000011980.b.b #26	ENSGT00950000182888.a.a.a.i ##28	ENSGT00950000182888.a.a.a.j.a #27	ENSGT00950000182888.a.a.a.j.b #28	ENSGT00390000009787 #29	ENSGT00940000158829 #30	ENSGT00950000183047.d #31	ENSGT00940000160451 #32	ENSGT00940000163010 #33	ENSGT00940000162328	ENSGT00390000004524 #34
Testudinoidea	ANCESTRAL SPECIES	23	ENSGT00940000154990	ENSGT00940000156902 #7	ENSGT00530000063187.A #8	ENSGT00940000158674 #9	ENSGT00940000160987 #10	ENSGT00390000016537 #11	ENSGT00940000158797 #12	ENSGT00940000154043.A #13	ENSGT00390000006287 #14	ENSGT00390000004067 #15	ENSGT00390000005742 #16	ENSGT00940000155841 #18	ENSGT00390000008565.a #19	ENSGT00390000013112 #20	ENSGT01060000248556.A.a.a.a #21	ENSGT00390000011500 #22	ENSGT00900000141021.b.a #23	ENSGT00390000008371.b #24	ENSGT00390000006784 #25	ENSGT00940000161643	ENSGT00390000011980.b.b #26	ENSGT00950000182888.a.a.a.i ##28	ENSGT00950000182888.a.a.a.j.a #27	ENSGT00950000182888.a.a.a.j.b #28	ENSGT00390000009787 #29	ENSGT00940000158829 #30	ENSGT00950000183047.d #31	ENSGT00940000160451 #32	ENSGT00940000163010 #33	ENSGT00940000162328	ENSGT00390000004524 #34
Emydidae	ANCESTRAL SPECIES	29	ENSGT00940000154990	ENSGT00940000156902 #7	ENSGT00530000063187.A #8	ENSGT00940000158674 #9	ENSGT00940000160987 #10	ENSGT00390000016537 #11	ENSGT00940000158797 #12	ENSGT00940000154043.A #13	ENSGT00390000006287 #14	ENSGT00390000004067 #15	ENSGT00390000005742 #16	ENSGT00940000155841 #18	ENSGT00390000008565.a #19	ENSGT00390000013112 #20	ENSGT01060000248556.A.a.a.a #21	ENSGT00390000011500 #22	ENSGT00900000141021.b.a #23	ENSGT00390000008371.b #24	ENSGT00390000006784 #25	ENSGT00940000161643	ENSGT00390000011980.b.b #26	ENSGT00950000182888.a.a.a.i ##28	ENSGT00950000182888.a.a.a.j.a #27	ENSGT00950000182888.a.a.a.j.b #28	ENSGT00390000009787 #29	ENSGT00940000158829 #30	ENSGT00950000183047.d #31	ENSGT00940000160451 #32	ENSGT00940000163010 #33	ENSGT00940000162328	ENSGT00390000004524 #34
Three-toed box turtle	MODERN SPECIES	113	ZDHHC12 (ENSTMTG00000022146) #7	ZER1 (ENSTMTG00000022153) #8	TBC1D13 (ENSTMTG00000022165) #9	ENDOG (ENSTMTG00000022174) #10	SPOUT1 (ENSTMTG00000022180) #11	KYAT1 (ENSTMTG00000022188) #12	LRRC8A (ENSTMTG00000022195) #13	PHYHD1 (ENSTMTG00000022202) #14	DOLK (ENSTMTG00000022214) #15	ENSTMTG00000022221 #16	NUP188 (ENSTMTG00000022232) #16	SH3GLB2 (ENSTMTG00000022242) #18	MIGA2 (ENSTMTG00000022244) #19	DOLPP1 (ENSTMTG00000022251) #20	CRAT (ENSTMTG00000022256) #21	PTPA (ENSTMTG00000022260) #22	IER5L (ENSTMTG00000022262) #23	NTMT1 (ENSTMTG00000022264) #24	ASB6 (ENSTMTG00000022266) #25	PRRX2 (ENSTMTG00000015809)	PTGES (ENSTMTG00000015812) #26	ENSTMTG00000015831 ##28	TOR1B (ENSTMTG00000015900) #27	TOR1A (ENSTMTG00000015923) #28	C9orf78 (ENSTMTG00000015930) #29	USP20 (ENSTMTG00000016119) #30	FNBP1 (ENSTMTG00000018039) #31	ENSTMTG00000018240 #32	ENSTMTG00000018264 #33	ENSTMTG00000018286	ASS1 (ENSTMTG00000018363) #34
painted turtle	MODERN SPECIES	716	ENSCPBG00000023366	ZDHHC12 (ENSCPBG00000023365) #7	ZER1 (ENSCPBG00000023362) #8	TBC1D13 (ENSCPBG00000023355) #9	ENDOG (ENSCPBG00000023353) #10	SPOUT1 (ENSCPBG00000023348) #11	KYAT1 (ENSCPBG00000023339) #12	LRRC8A (ENSCPBG00000023338) #13	PHYHD1 (ENSCPBG00000023333) #14	DOLK (ENSCPBG00000023330) #15	NUP188 (ENSCPBG00000022859) #16	SH3GLB2 (ENSCPBG00000022792) #18	MIGA2 (ENSCPBG00000022784) #19	DOLPP1 (ENSCPBG00000022775) #20	CRAT (ENSCPBG00000022764) #21	PTPA (ENSCPBG00000022756) #22	ENSCPBG00000022752 #23	NTMT1 (ENSCPBG00000022748) #24	ASB6 (ENSCPBG00000022744) #25	PRRX2 (ENSCPBG00000022740)	PTGES (ENSCPBG00000022736) #26	ENSCPBG00000022732 ##28	TOR1B (ENSCPBG00000022731) #27	TOR1A (ENSCPBG00000022729) #28	C9orf78 (ENSCPBG00000022726) #29	USP20 (ENSCPBG00000022718) #30	FNBP1 (ENSCPBG00000022705) #31	ENSCPBG00000022697	ENSCPBG00000022683 #33	ASS1 (ENSCPBG00000022650) #34	FUBP3 (ENSCPBG00000022635) #35
Testudinidae	ANCESTRAL SPECIES	29	ENSGT00940000154990	ENSGT00940000156902 #7	ENSGT00530000063187.A #8	ENSGT00940000158674 #9	ENSGT00940000160987 #10	ENSGT00390000016537 #11	ENSGT00940000158797 #12	ENSGT00940000154043.A #13	ENSGT00390000006287 #14	ENSGT00390000004067 #15	ENSGT00390000005742 #16	ENSGT00940000155841 #18	ENSGT00390000008565.a #19	ENSGT00390000013112 #20	ENSGT01060000248556.A.a.a.a #21	ENSGT00390000011500 #22	ENSGT00900000141021.b.a #23	ENSGT00390000008371.b #24	ENSGT00390000006784 #25	ENSGT00940000161643	ENSGT00390000011980.b.b #26	ENSGT00950000182888.a.a.a.i ##28	ENSGT00950000182888.a.a.a.j.a #27	ENSGT00950000182888.a.a.a.j.b #28	ENSGT00390000009787 #29	ENSGT00940000158829 #30	ENSGT00950000183047.d #31	ENSGT00940000160451 #32	ENSGT00940000163010 #33	ENSGT00940000162328	ENSGT00390000004524 #34
Goode s thornscrub tortoise	MODERN SPECIES	7	SET (ENSGEVG00005021077)	ENSGEVG00005021080	ZDHHC12 (ENSGEVG00005021087) #7	ZER1 (ENSGEVG00005021100) #8	TBC1D13 (ENSGEVG00005021107) #9	SPOUT1 (ENSGEVG00005021111) #11	KYAT1 (ENSGEVG00005021117) #12	LRRC8A (ENSGEVG00005021129) #13	PHYHD1 (ENSGEVG00005021134) #14	DOLK (ENSGEVG00005021140) #15	NUP188 (ENSGEVG00005021150) #16	SH3GLB2 (ENSGEVG00005021173) #18	MIGA2 (ENSGEVG00005021178) #19	DOLPP1 (ENSGEVG00005021185) #20	CRAT (ENSGEVG00005021191) #21	PTPA (ENSGEVG00005021201) #22	ENSGEVG00005021208 #23	NTMT1 (ENSGEVG00005021211) #24	ASB6 (ENSGEVG00005021215) #25	PRRX2 (ENSGEVG00005021218)	PTGES (ENSGEVG00005021221) #26	ENSGEVG00005021223 ##28	TOR1B (ENSGEVG00005021224) #27	TOR1A (ENSGEVG00005021226) #28	C9orf78 (ENSGEVG00005021227) #29	USP20 (ENSGEVG00005021231) #30	FNBP1 (ENSGEVG00005021238) #31	GPR107 (ENSGEVG00005021241) #32	ENSGEVG00005021244 #33	ENSGEVG00005021253	ASS1 (ENSGEVG00005004170) #34
Abingdon island giant tortoise	MODERN SPECIES	2008	ENSCABG00000002242	ZDHHC12 (ENSCABG00000002244) #7	ZER1 (ENSCABG00000002245) #8	TBC1D13 (ENSCABG00000002259) #9	ENDOG (ENSCABG00000002486) #10	SPOUT1 (ENSCABG00000002494) #11	KYAT1 (ENSCABG00000002511) #12	LRRC8A (ENSCABG00000002623) #13	PHYHD1 (ENSCABG00000002626) #14	DOLK (ENSCABG00000002676) #15	NUP188 (ENSCABG00000002715) #16	SH3GLB2 (ENSCABG00000004650) #18	MIGA2 (ENSCABG00000004654) #19	DOLPP1 (ENSCABG00000004694) #20	CRAT (ENSCABG00000004696) #21	PTPA (ENSCABG00000004699) #22	IER5L (ENSCABG00000004700) #23	NTMT1 (ENSCABG00000004701) #24	ASB6 (ENSCABG00000004702) #25	PRRX2 (ENSCABG00000004708)	PTGES (ENSCABG00000004709) #26	ENSCABG00000004711 ##28	TOR1B (ENSCABG00000004714) #27	TOR1A (ENSCABG00000004716) #28	C9orf78 (ENSCABG00000004719) #29	USP20 (ENSCABG00000004721) #30	FNBP1 (ENSCABG00000004726) #31	ENSCABG00000004729 #33	ENSCABG00000004730	ENSCABG00000004735	ENSCABG00000004739
Chinese turtle	MODERN SPECIES	1463													ENSPSIG00000017860 #19	DOLPP1 (ENSPSIG00000017864) #20	CRAT (ENSPSIG00000017886) #21	PTPA (ENSPSIG00000005416) #22	NTMT1 (ENSPSIG00000005495) #24	ASB6 (ENSPSIG00000005511) #25	PRRX2 (ENSPSIG00000005594)	PTGES (ENSPSIG00000005605) #26	ENSPSIG00000005620 ##28	TOR1B (ENSPSIG00000005624) #27	TOR1A (ENSPSIG00000005705) #28	C9orf78 (ENSPSIG00000005885) #29	USP20 (ENSPSIG00000005924) #30	FNBP1 (ENSPSIG00000005955) #31	NCS1 (ENSPSIG00000006499)	ENSPSIG00000006548	ENSPSIG00000006562	ASS1 (ENSPSIG00000006577) #34	FUBP3 (ENSPSIG00000006734) #35
Lepidosauria	ANCESTRAL SPECIES	21	ENSGT00940000154990	ENSGT00940000156902 #7	ENSGT00530000063187.A #8	ENSGT00940000158674 #9	ENSGT00940000160987 #10	ENSGT00390000016537 #11	ENSGT00940000158797 #12	ENSGT00940000154043.A #13	ENSGT00390000006287 #14	ENSGT00390000004067 #15	ENSGT00390000005742 #16	ENSGT00940000155841 #18	ENSGT00390000008565.a #19	ENSGT00390000013112 #20	ENSGT01060000248556.A.a.a.a #21	ENSGT00390000011500 #22	ENSGT00900000141021.b.a #23	ENSGT00390000008371.b #24	ENSGT00390000006784 #25	ENSGT00940000161643	ENSGT00390000011980.b.b #26	ENSGT00950000182888.a.a.a.j.a #27	ENSGT00950000182888.a.a.a.j.b #28	ENSGT00390000009787 #29	ENSGT00940000158829 #30	ENSGT00950000183047.d #31	ENSGT00940000160451 #32	ENSGT00940000154645.B	ENSGT00390000004524 #34	ENSGT00940000156744 #35	ENSGT00940000161616 #36
Episquamata	ANCESTRAL SPECIES	15	ENSGT00940000154990	ENSGT00940000156902 #7	ENSGT00530000063187.A #8	ENSGT00940000158674 #9	ENSGT00940000160987 #10	ENSGT00390000016537 #11	ENSGT00940000158797 #12	ENSGT00940000154043.A #13	ENSGT00390000006287 #14	ENSGT00390000004067 #15	ENSGT00390000005742 #16	ENSGT00940000155841 #18	ENSGT00390000008565.a #19	ENSGT00390000013112 #20	ENSGT01060000248556.A.a.a.a #21	ENSGT00390000011500 #22	ENSGT00900000141021.b.a #23	ENSGT00390000008371.b #24	ENSGT00390000006784 #25	ENSGT00940000161643	ENSGT00390000011980.b.b #26	ENSGT00950000182888.a.a.a.j.a #27	ENSGT00950000182888.a.a.a.j.b #28	ENSGT00390000009787 #29	ENSGT00940000158829 #30	ENSGT00950000183047.d #31	ENSGT00940000160451 #32	ENSGT00940000154645.B	ENSGT00390000004524 #34	ENSGT00940000156744 #35	ENSGT00940000161616 #36
Laterata	ANCESTRAL SPECIES	46	ENSGT00940000154990	ENSGT00940000156902 #7	ENSGT00530000063187.A #8	ENSGT00940000158674 #9	ENSGT00940000160987 #10	ENSGT00390000016537 #11	ENSGT00940000158797 #12	ENSGT00940000154043.A #13	ENSGT00390000006287 #14	ENSGT00390000004067 #15	ENSGT00390000005742 #16	ENSGT00940000155841 #18	ENSGT00390000008565.a #19	ENSGT00390000013112 #20	ENSGT01060000248556.A.a.a.a #21	ENSGT00390000011500 #22	ENSGT00900000141021.b.a #23	ENSGT00390000008371.b #24	ENSGT00390000006784 #25	ENSGT00940000161643	ENSGT00390000011980.b.b #26	ENSGT00950000182888.a.a.a.j.a #27	ENSGT00950000182888.a.a.a.j.b #28
Argentine black and white tegu	MODERN SPECIES	129	GPSM1 (ENSSMRG00000021333)	DNLZ (ENSSMRG00000021334)	ENSSMRG00000021335	CARD9 (ENSSMRG00000021336)	SNAPC4 (ENSSMRG00000021337)	ENTR1 (ENSSMRG00000021338)	PMPCA (ENSSMRG00000021339)	INPP5E (ENSSMRG00000021340)	SEC16A (ENSSMRG00000021341)	NOTCH1 (ENSSMRG00000021342)	EGFL7 (ENSSMRG00000021343)	AGPAT2 (ENSSMRG00000021344)	DIPK1B (ENSSMRG00000021345)	DOLPP1 (ENSSMRG00000021346) #20	CRAT (ENSSMRG00000021347) #21	PTPA (ENSSMRG00000021348) #22	ENSSMRG00000021349 #23	NTMT1 (ENSSMRG00000021353) #24	ASB6 (ENSSMRG00000021354) #25	PRRX2 (ENSSMRG00000021356)	PTGES (ENSSMRG00000021357) #26
Common wall lizard	MODERN SPECIES	419	ZDHHC12 (ENSPMRG00000021947) #7	ZER1 (ENSPMRG00000021965) #8	TBC1D13 (ENSPMRG00000021980) #9	ENDOG (ENSPMRG00000022000) #10	ENSPMRG00000022004 #11	KYAT1 (ENSPMRG00000022020) #12	ENSPMRG00000022024	LRRC8A (ENSPMRG00000022029) #13	PHYHD1 (ENSPMRG00000022035) #14	DOLK (ENSPMRG00000022039) #15	NUP188 (ENSPMRG00000022141) #16	SH3GLB2 (ENSPMRG00000022512) #18	MIGA2 (ENSPMRG00000022521) #19	DOLPP1 (ENSPMRG00000022525) #20	CRAT (ENSPMRG00000022532) #21	PTPA (ENSPMRG00000022536) #22	NTMT1 (ENSPMRG00000022539) #24	ENSPMRG00000022552 #25	PTGES (ENSPMRG00000022555) #26	TOR1B (ENSPMRG00000022558) #27	TOR1A (ENSPMRG00000022562) #28	MYMK (ENSPMRG00000022566)	ADAMTSL2 (ENSPMRG00000022580)	FAM163B (ENSPMRG00000022626)	DBH (ENSPMRG00000022633)	SARDH (ENSPMRG00000022640)	VAV2 (ENSPMRG00000022666)	ENSPMRG00000022719	BRD3 (ENSPMRG00000022725)	ENSPMRG00000022732	RXRA (ENSPMRG00000022747)
Toxicofera	ANCESTRAL SPECIES	26	ENSGT00940000154990	ENSGT00940000156902 #7	ENSGT00530000063187.A #8	ENSGT00940000158674 #9	ENSGT00940000160987 #10	ENSGT00390000016537 #11	ENSGT00940000158797 #12	ENSGT00940000154043.A #13	ENSGT00390000006287 #14	ENSGT00390000004067 #15	ENSGT00390000005742 #16	ENSGT00940000155841 #18	ENSGT00390000008565.a #19	ENSGT00390000013112 #20	ENSGT01060000248556.A.a.a.a #21	ENSGT00390000011500 #22	ENSGT00900000141021.b.a #23	ENSGT00390000008371.b #24	ENSGT00390000006784 #25	ENSGT00940000161643	ENSGT00390000011980.b.b #26	ENSGT00950000182888.a.a.a.j.a #27	ENSGT00950000182888.a.a.a.j.b #28	ENSGT00390000009787 #29	ENSGT00940000158829 #30	ENSGT00950000183047.d #31	ENSGT00940000160451 #32	ENSGT00940000154645.B	ENSGT00940000163010 #33	ENSGT00390000004524 #34	ENSGT00940000156744 #35
Elapidae	DUPLICATION
Elapidae	ANCESTRAL SPECIES	18	ENSGT00940000154990	ENSGT00940000156902 #7	ENSGT00530000063187.A #8	ENSGT00940000158674 #9	ENSGT00940000160987 #10	ENSGT00390000016537 #11	ENSGT00940000158797 #12	ENSGT00940000154043.A #13	ENSGT00390000006287 #14	ENSGT00390000004067 #15	ENSGT00390000005742 #16	ENSGT00940000155841 #18	ENSGT00390000008565.a #19	ENSGT00390000013112 #20	ENSGT01060000248556.A.a.a.a #21	ENSGT00390000011500.u #22	ENSGT00390000011500.v #22	ENSGT00900000141021.b.a #23	ENSGT00390000008371.b #24	ENSGT00390000006784 #25	ENSGT00940000161643	ENSGT00390000011980.b.b #26	ENSGT00950000182888.a.a.a.j.a #27	ENSGT00950000182888.a.a.a.j.b #28	ENSGT00390000009787 #29	ENSGT00940000158829.k.b #30	ENSGT00950000183047.d #31	ENSGT00940000160451 #32	ENSGT00940000154645.B	ENSGT00940000163010 #33	ENSGT00390000004524 #34
Elapidae_a	ANCESTRAL SPECIES	26	ENSGT00940000154990	ENSGT00940000156902 #7	ENSGT00530000063187.A #8	ENSGT00940000158674 #9	ENSGT00940000160987 #10	ENSGT00390000016537 #11	ENSGT00940000158797 #12	ENSGT00940000154043.A #13	ENSGT00390000006287 #14	ENSGT00390000004067 #15	ENSGT00390000005742 #16	ENSGT00940000155841 #18	ENSGT00390000008565.a #19	ENSGT00390000013112 #20	ENSGT01060000248556.A.a.a.a #21	ENSGT00390000011500.u #22	ENSGT00900000141021.b.a #23	ENSGT00390000008371.b #24	ENSGT00390000006784 #25	ENSGT00940000161643	ENSGT00390000011980.b.b #26	ENSGT00950000182888.a.a.a.j.a #27	ENSGT00950000182888.a.a.a.j.b #28	ENSGT00390000009787 #29	ENSGT00940000158829.k.a #30	ENSGT00950000183047.d.b #31	ENSGT00950000183047.d.a #31	ENSGT00940000158829.k.b #30	ENSGT00940000160451 #32	ENSGT00940000154645.B	ENSGT00390000004524 #34
Acanthophiinae	ANCESTRAL SPECIES	27	ENSGT00530000063187.A #8	ENSGT00990000211901	ENSGT00940000158674 #9	ENSGT00940000160987 #10	ENSGT00390000016537.b #11	ENSGT00390000016537.a #11	ENSGT00940000158797 #12	ENSGT00940000154043.A #13	ENSGT00390000006287 #14	ENSGT00390000004067 #15	ENSGT00390000005742 #16	ENSGT00940000155841 #18	ENSGT00390000008565.a #19	ENSGT00390000013112 #20	ENSGT01060000248556.A.a.a.a #21	ENSGT00390000011500.u #22	ENSGT00390000011500.v #22	ENSGT00900000141021.b.a #23	ENSGT00390000008371.b #24	ENSGT00390000006784 #25	ENSGT00940000161643	ENSGT00390000011980.b.b #26	ENSGT00950000182888.a.a.a.j.a #27	ENSGT00950000182888.a.a.a.j.b #28	ENSGT00390000009787 #29	ENSGT00940000158829.k.b #30	ENSGT00940000158829.k.a #30	ENSGT00950000183047.d.b #31	ENSGT00950000183047.d.a #31	ENSGT00940000160451 #32	ENSGT00940000154645.B
Eastern brown snake	MODERN SPECIES	54	ZER1 (ENSPTXG00000014145) #8	TBC1D13 (ENSPTXG00000014150) #9	ENSPTXG00000014156	ENDOG (ENSPTXG00000014159) #10	ENSPTXG00000014160 #11	ENSPTXG00000014162 #11	KYAT1 (ENSPTXG00000014164) #12	LRRC8A (ENSPTXG00000014166) #13	PHYHD1 (ENSPTXG00000014171) #14	DOLK (ENSPTXG00000014183) #15	NUP188 (ENSPTXG00000014184) #16	SH3GLB2 (ENSPTXG00000014200) #18	MIGA2 (ENSPTXG00000014202) #19	DOLPP1 (ENSPTXG00000014203) #20	CRAT (ENSPTXG00000014208) #21	PTPA (ENSPTXG00000014243) #22	ENSPTXG00000014245 #23	NTMT1 (ENSPTXG00000014247) #24	ASB6 (ENSPTXG00000014249) #25	PRRX2 (ENSPTXG00000014251)	PTGES (ENSPTXG00000014253) #26	TOR1B (ENSPTXG00000014254) #27	TOR1A (ENSPTXG00000014256) #28	C9orf78 (ENSPTXG00000014257) #29	ENSPTXG00000014258 #30	ENSPTXG00000014260 #31	ENSPTXG00000014262 #31	GPR107 (ENSPTXG00000014263) #32	ENSPTXG00000014265 #33	ASS1 (ENSPTXG00000014266) #34	FUBP3 (ENSPTXG00000014267) #35
Mainland tiger snake	MODERN SPECIES	1907																ENSNSUG00000001224 #22
Blue-lipped sea krait	MODERN SPECIES	2519	ENSLLTG00000007358	ZDHHC12 (ENSLLTG00000007279) #7	ZER1 (ENSLLTG00000007236) #8	TBC1D13 (ENSLLTG00000007201) #9	ENDOG (ENSLLTG00000007183) #10	SPOUT1 (ENSLLTG00000007160) #11	KYAT1 (ENSLLTG00000007118) #12	LRRC8A (ENSLLTG00000007104) #13	PHYHD1 (ENSLLTG00000007079) #14	DOLK (ENSLLTG00000007054) #15	NUP188 (ENSLLTG00000006945) #16	SH3GLB2 (ENSLLTG00000006697) #18	MIGA2 (ENSLLTG00000006538) #19	DOLPP1 (ENSLLTG00000006485) #20	CRAT (ENSLLTG00000006452) #21	PTPA (ENSLLTG00000017944) #22	ENSLLTG00000017942 #23	NTMT1 (ENSLLTG00000017941) #24	ASB6 (ENSLLTG00000017940) #25	PRRX2 (ENSLLTG00000017939)	NCS1 (ENSLLTG00000017937)	ASS1 (ENSLLTG00000017933) #34
Elapidae	ANCESTRAL SPECIES	18	ENSGT00940000156902 #7	ENSGT00530000063187.A #8	ENSGT00940000158674 #9	ENSGT00940000160987 #10	ENSGT00390000016537 #11	ENSGT00940000158797 #12	ENSGT00940000154043.A #13	ENSGT00390000006287 #14	ENSGT00390000004067 #15	ENSGT00390000005742 #16	ENSGT00940000155841 #18	ENSGT00390000008565.a #19	ENSGT00390000013112 #20	ENSGT01060000248556.A.a.a.a #21	ENSGT00390000011500.u #22	ENSGT00390000011500.v #22	ENSGT00900000141021.b.a #23	ENSGT00390000008371.b #24	ENSGT00390000006784 #25	ENSGT00940000161643	ENSGT00390000011980.b.b #26	ENSGT00950000182888.a.a.a.j.a #27	ENSGT00950000182888.a.a.a.j.b #28	ENSGT00390000009787 #29	ENSGT00940000158829.k.b #30	ENSGT00950000183047.d #31	ENSGT00940000160451 #32	ENSGT00940000154645.B	ENSGT00940000163010 #33	ENSGT00390000004524 #34	ENSGT00940000156744 #35
Indian cobra	MODERN SPECIES	8	ENSNNAG00000017092	ZDHHC12 (ENSNNAG00000017153) #7	TBC1D13 (ENSNNAG00000017159) #9	ENDOG (ENSNNAG00000017168) #10	SPOUT1 (ENSNNAG00000017173) #11	KYAT1 (ENSNNAG00000017180) #12	ENSNNAG00000017185 #13	ENSNNAG00000017188 #13	PHYHD1 (ENSNNAG00000017196) #14	DOLK (ENSNNAG00000017205) #15	NUP188 (ENSNNAG00000017297) #16	SH3GLB2 (ENSNNAG00000017491) #18	MIGA2 (ENSNNAG00000017503) #19	DOLPP1 (ENSNNAG00000017511) #20	CRAT (ENSNNAG00000017524) #21	ENSNNAG00000017580 #22	ENSNNAG00000017588 #23	NTMT1 (ENSNNAG00000017593) #24	ASB6 (ENSNNAG00000017600) #25	PRRX2 (ENSNNAG00000017604)	PTGES (ENSNNAG00000017607) #26	TOR1B (ENSNNAG00000017614) #27	TOR1A (ENSNNAG00000017616) #28	C9orf78 (ENSNNAG00000017621) #29	USP20 (ENSNNAG00000017645) #30	FNBP1 (ENSNNAG00000017668) #31	GPR107 (ENSNNAG00000017702) #32	ENSNNAG00000017719	FUBP3 (ENSNNAG00000017723) #35	ABL1 (ENSNNAG00000017760)	ENSNNAG00000017763
Elapidae_a	ANCESTRAL SPECIES																	ENSGT00390000011500.v #22
Acanthophiinae	ANCESTRAL SPECIES	27	ENSGT00990000211901	ENSGT00940000158674 #9	ENSGT00940000160987 #10	ENSGT00390000016537.b #11	ENSGT00390000016537.a #11	ENSGT00940000158797 #12	ENSGT00940000154043.A #13	ENSGT00390000006287 #14	ENSGT00390000004067 #15	ENSGT00390000005742 #16	ENSGT00940000155841 #18	ENSGT00390000008565.a #19	ENSGT00390000013112 #20	ENSGT01060000248556.A.a.a.a #21	ENSGT00390000011500.u #22	ENSGT00390000011500.v #22	ENSGT00900000141021.b.a #23	ENSGT00390000008371.b #24	ENSGT00390000006784 #25	ENSGT00940000161643	ENSGT00390000011980.b.b #26	ENSGT00950000182888.a.a.a.j.a #27	ENSGT00950000182888.a.a.a.j.b #28	ENSGT00390000009787 #29	ENSGT00940000158829.k.b #30	ENSGT00940000158829.k.a #30	ENSGT00950000183047.d.b #31	ENSGT00950000183047.d.a #31	ENSGT00940000160451 #32	ENSGT00940000154645.B	ENSGT00940000163010 #33
Mainland tiger snake	MODERN SPECIES	426																ENSNSUG00000008282 #22	ENSNSUG00000008281 #23	NTMT1 (ENSNSUG00000008280) #24	ASB6 (ENSNSUG00000008279) #25	PRRX2 (ENSNSUG00000008278)	PTGES (ENSNSUG00000008277) #26	TOR1B (ENSNSUG00000008276) #27	TOR1A (ENSNSUG00000008275) #28	C9orf78 (ENSNSUG00000008274) #29	USP20 (ENSNSUG00000008273) #30	ENSNSUG00000008272 #31	ENSNSUG00000008271 #31
Lizard	MODERN SPECIES	1633													ENSACAG00000017233 #19	DOLPP1 (ENSACAG00000017227) #20	CRAT (ENSACAG00000017176) #21	PTPA (ENSACAG00000011425) #22
tuatara	DUPLICATION
tuatara	MODERN SPECIES	746	ZDHHC12 (ENSSPUG00000014168) #7	ZER1 (ENSSPUG00000014152) #8	ENSSPUG00000014145	TBC1D13 (ENSSPUG00000014090) #9	SPOUT1 (ENSSPUG00000014052) #11	KYAT1 (ENSSPUG00000014008) #12	LRRC8A (ENSSPUG00000013994) #13	ENSSPUG00000013984	PHYHD1 (ENSSPUG00000013902) #14	DOLK (ENSSPUG00000013885) #15	NUP188 (ENSSPUG00000013847) #16	SH3GLB2 (ENSSPUG00000013828) #18	MIGA2 (ENSSPUG00000013797) #19	DOLPP1 (ENSSPUG00000013774) #20	CRAT (ENSSPUG00000013763) #21	ENSSPUG00000013747 #22	ENSSPUG00000013737 #22	NTMT1 (ENSSPUG00000013697) #24	ASB6 (ENSSPUG00000013687) #25	PRRX2 (ENSSPUG00000013682)	PTGES (ENSSPUG00000013674) #26	TOR1B (ENSSPUG00000013659) #27	TOR1A (ENSSPUG00000013644) #28	C9orf78 (ENSSPUG00000013636) #29	ENSSPUG00000013627 #30	ENSSPUG00000013621 #30	ENSSPUG00000013609 #30	FNBP1 (ENSSPUG00000013574) #31	GPR107 (ENSSPUG00000013547) #32	ENSSPUG00000013532 #33	ENSSPUG00000013499
tuatara	MODERN SPECIES	746	ZER1 (ENSSPUG00000014152) #8	ENSSPUG00000014145	TBC1D13 (ENSSPUG00000014090) #9	SPOUT1 (ENSSPUG00000014052) #11	KYAT1 (ENSSPUG00000014008) #12	LRRC8A (ENSSPUG00000013994) #13	ENSSPUG00000013984	PHYHD1 (ENSSPUG00000013902) #14	DOLK (ENSSPUG00000013885) #15	NUP188 (ENSSPUG00000013847) #16	SH3GLB2 (ENSSPUG00000013828) #18	MIGA2 (ENSSPUG00000013797) #19	DOLPP1 (ENSSPUG00000013774) #20	CRAT (ENSSPUG00000013763) #21	ENSSPUG00000013747 #22	ENSSPUG00000013737 #22	NTMT1 (ENSSPUG00000013697) #24	ASB6 (ENSSPUG00000013687) #25	PRRX2 (ENSSPUG00000013682)	PTGES (ENSSPUG00000013674) #26	TOR1B (ENSSPUG00000013659) #27	TOR1A (ENSSPUG00000013644) #28	C9orf78 (ENSSPUG00000013636) #29	ENSSPUG00000013627 #30	ENSSPUG00000013621 #30	ENSSPUG00000013609 #30	FNBP1 (ENSSPUG00000013574) #31	GPR107 (ENSSPUG00000013547) #32	ENSSPUG00000013532 #33	ENSSPUG00000013499	ASS1 (ENSSPUG00000013476) #34
tuatara	MODERN SPECIES	494																ENSSPUG00000004086 #22
Anura	ANCESTRAL SPECIES	38	ENSGT00940000154990.d	ENSGT00940000156902 #7	ENSGT00530000063187.A #8	ENSGT00940000158674 #9	ENSGT00940000160987 #10	ENSGT00390000016537 #11	ENSGT00940000158797 #12	ENSGT00940000154043.A.h #13	ENSGT00390000006287 #14	ENSGT00390000004067 #15	ENSGT00390000005742 #16	ENSGT00940000155841 #18	ENSGT00390000008565.a #19	ENSGT00390000013112 #20	ENSGT01060000248556.A.a.a.a #21	ENSGT00390000011500 #22	ENSGT00900000141021.b.a #23	ENSGT00390000008371.b #24	ENSGT00390000006784 #25	ENSGT00940000159466.m	ENSGT00390000011980.b.b #26	ENSGT00950000182888.a.a.a.j.a.k #27	ENSGT00950000182888.a.a.a.j.a.l #27	ENSGT00390000009787 #29	ENSGT00940000158829 #30	ENSGT00950000183047.d #31	ENSGT00940000160451 #32	ENSGT00940000154645.B	ENSGT00390000004524 #34	ENSGT00940000156744 #35	ENSGT00940000161616 #36
Frog	MODERN SPECIES	8	ENSXETG00000046354	ENSXETG00000041302	ENSXETG00000045353	ENSXETG00000045334	ENSXETG00000043885	ENSXETG00000048769	ENSXETG00000044216	ENSXETG00000035944	ENSXETG00000041972	ENSXETG00000046459	miga2 (ENSXETG00000018962) #19	ENSXETG00000042122	dolpp1 (ENSXETG00000018964) #20	ENSXETG00000046957	crata (ENSXETG00000018965) #21	ptpa (ENSXETG00000018970) #22	ier5l (ENSXETG00000014109) #23	ENSXETG00000044084	ENSXETG00000047012	ENSXETG00000043209	ENSXETG00000043709	ntmt1 (ENSXETG00000014162) #24	ENSXETG00000041703	asb6 (ENSXETG00000014166) #25	prrx2 (ENSXETG00000014169)	ptges (ENSXETG00000014173) #26	ENSXETG00000043744	tor1b (ENSXETG00000023595) #27	tor1a (ENSXETG00000012843) #27	c9orf78 (ENSXETG00000012840) #29	usp20 (ENSXETG00000012844) #30
Leishan spiny toad	MODERN SPECIES	12	ZDHHC12 (ENSLLEG00000028511) #7	ZER1 (ENSLLEG00000028562) #8	TBC1D13 (ENSLLEG00000028812) #9	ENDOG (ENSLLEG00000028950) #10	SPOUT1 (ENSLLEG00000028985) #11	KYAT1 (ENSLLEG00000029041) #12	LRRC8A (ENSLLEG00000029088) #13	ENSLLEG00000029100 #13	PHYHD1 (ENSLLEG00000029123) #14	DOLK (ENSLLEG00000029211) #15	NUP188 (ENSLLEG00000029238) #16	SH3GLB2 (ENSLLEG00000029441) #18	MIGA2 (ENSLLEG00000030061) #19	DOLPP1 (ENSLLEG00000030099) #20	CRAT (ENSLLEG00000030154) #21	PTPA (ENSLLEG00000030305) #22	IER5L (ENSLLEG00000030331) #23	ENSLLEG00000030335	ENSLLEG00000030342	NTMT1 (ENSLLEG00000030346) #24	ASB6 (ENSLLEG00000030359) #25	ENSLLEG00000030410	PTGES (ENSLLEG00000030420) #26	ENSLLEG00000030429 ##28	TOR1B (ENSLLEG00000030445) #27	ENSLLEG00000016844	ENSLLEG00000016919 #27	ENSLLEG00000017046 #27	C9orf78 (ENSLLEG00000017482) #29	USP20 (ENSLLEG00000017625) #30	ENSLLEG00000018300
Coelacanth	MODERN SPECIES	379	CDK9 (ENSLACG00000017060)	ENG (ENSLACG00000022182)	AK1 (ENSLACG00000016861)	ak5l (ENSLACG00000016782)	ST6GALNAC6 (ENSLACG00000016746)	st6galnac4 (ENSLACG00000016684)	ENSLACG00000022524	PIP5KL1 (ENSLACG00000016593)	DPM2 (ENSLACG00000016528)	EEIG1 (ENSLACG00000016372)	NAIF1 (ENSLACG00000016334)	ENSLACG00000016187	col27a1b (ENSLACG00000014648)	SH2D3C (ENSLACG00000013723)	CRAT (ENSLACG00000013470) #21	PTPA (ENSLACG00000013216) #22	IER5L (ENSLACG00000013099) #23	ENSLACG00000011406	NTMT1 (ENSLACG00000009027) #24	ASB6 (ENSLACG00000008918) #25	PRRX2 (ENSLACG00000007765)	ptges (ENSLACG00000007204) ##26	TOR1B (ENSLACG00000006347) #27	C9orf78 (ENSLACG00000006036) #29	USP20 (ENSLACG00000005362) #30	FNBP1 (ENSLACG00000000973) #31
Actinopterygii	ANCESTRAL SPECIES	145	ENSGT00390000016543	ENSGT00940000156611	ENSGT00390000000642	ENSGT00940000163762.b	ENSGT00940000155945	ENSGT00940000157955	ENSGT00940000160616	ENSGT00940000159944	ENSGT00940000154079.b	ENSGT00940000155946	ENSGT00530000064359.c.b	ENSGT00930000151016	ENSGT00940000158379	ENSGT00940000178229	ENSGT01060000248556.A.a.a.a #21	ENSGT00390000011500 #22	ENSGT00900000141021.b.a #23	ENSGT00390000008371.b #24	ENSGT00390000006784 #25
Neopterygii	ANCESTRAL SPECIES	229				ENSGT00390000016002	ENSGT00390000016543	ENSGT00940000156611	ENSGT00390000000642	ENSGT00940000163762.b	ENSGT00940000155945	ENSGT00940000154374.a	ENSGT00940000157955.d.b	ENSGT00940000159944	ENSGT00940000158379	ENSGT00940000178229	ENSGT01060000248556.A.a.a.a #21	ENSGT00390000011500 #22	ENSGT00900000141021.b.a #23	ENSGT00390000008371.b #24	ENSGT00390000006784 #25
Osteoglossocephalai	ANCESTRAL SPECIES	49	ENSGT00390000000459.c	ENSGT00940000164721	ENSGT00940000164876	ENSGT00940000155188.B.b	ENSGT00940000156621.e.a	ENSGT00390000016002	ENSGT00390000016543.d	ENSGT00390000016543.c	ENSGT00940000156611	ENSGT00390000000642	ENSGT00940000163762.b	ENSGT00940000155945.i.a	ENSGT00940000154645.B	ENSGT00940000160451 #32	ENSGT01060000248556.A.a.a.a.b.a #21	ENSGT00390000011500 #22	ENSGT00900000141021.b.a.d #23	ENSGT00390000008371.b #24	ENSGT00930000151050	ENSGT00530000064286	ENSGT00930000151044	ENSGT00390000006922	ENSGT00940000164386	ENSGT00940000155151.a.a.b	ENSGT00940000164907.b.b	ENSGT00950000183101.a.b.b.a.b	ENSGT00940000156261	ENSGT00940000158540	ENSGT00940000159990	ENSGT00940000157419	ENSGT00940000165669
Clupeocephala	ANCESTRAL SPECIES	195				ENSGT00940000155188.B.a	ENSGT00940000156621.e.b	ENSGT00390000016002.o.b	ENSGT00390000016543.d	ENSGT00390000000642	ENSGT00940000164541	ENSGT00940000155945.i.a	ENSGT00940000157955.d.a	ENSGT00940000160616	ENSGT00940000155946.c.b	ENSGT00930000151016	ENSGT01060000248556.A.a.a.a.b.a #21	ENSGT00390000011500 #22	ENSGT00900000141021.b.a.d #23	ENSGT00390000008371.b #24	ENSGT00930000151050	ENSGT00530000064286	ENSGT00930000151044	ENSGT00390000006922	ENSGT00940000164386	ENSGT00940000155151.a.a.b	ENSGT00940000164907.b.b	ENSGT00940000154394.b.a.a.b.b	ENSGT00950000183101.a.b.b.a.b	ENSGT00940000156261	ENSGT00940000158540	ENSGT00940000159990	ENSGT00940000157419
Otomorpha	ANCESTRAL SPECIES	193	ENSGT00940000155188.B.a	ENSGT00940000156621.e.b	ENSGT00390000016002.o.b	ENSGT00390000016543.d	ENSGT00390000000642	ENSGT00940000164541	ENSGT00940000155945.i.a	ENSGT00940000157955.d.a	ENSGT00940000160616	ENSGT00940000154079.b.b	ENSGT00940000155946.c.b	ENSGT00930000151016	ENSGT00940000154645.B	ENSGT00940000160451 #32	ENSGT01060000248556.A.a.a.a.b.a #21	ENSGT00390000011500 #22	ENSGT00900000141021.b.a.d #23	ENSGT00390000008371.b #24	ENSGT00930000151050	ENSGT00930000151044	ENSGT00390000006922	ENSGT00940000164386	ENSGT00940000155151.a.a.b	ENSGT00940000164907.b.b	ENSGT00390000016526	ENSGT00940000155373	ENSGT00950000183101.a.b.b.a.b	ENSGT00940000156261	ENSGT00940000158540	ENSGT00940000159990	ENSGT00940000157419
Clupeiformes	ANCESTRAL SPECIES	105	ENSGT00950000182888.a.a.a.h #28	ENSGT00390000018706	ENSGT00390000016537 #11	ENSGT00940000160114	ENSGT00940000157958	ENSGT00390000008565.a #19	ENSGT00390000013112 #20	ENSGT00940000160918	ENSGT00940000153601.a.a.e.b.a	ENSGT00940000154079.b.b	ENSGT00940000155946.c.b	ENSGT00930000151016	ENSGT00940000154645.B.e	ENSGT00940000160451 #32	ENSGT01060000248556.A.a.a.a.b.a #21	ENSGT00390000011500 #22	ENSGT00900000141021.b.a.d.a #23	ENSGT00390000008371.b #24	ENSGT00930000151050	ENSGT00930000151044	ENSGT00390000006922	ENSGT00940000164386	ENSGT00940000155151.a.a.b	ENSGT00940000164907.b.b	ENSGT00940000154394.b.a.a.a.a.a.b	ENSGT00390000020276.mb.b	ENSGT00390000016526	ENSGT00940000155373	ENSGT00950000183101.a.b.b.a.b	ENSGT00940000156261	ENSGT00940000158540
Denticle herring	MODERN SPECIES	13	ENSDCDG00000024317	TRAF2 (ENSDCDG00000027145)	RABL6 (ENSDCDG00000027149)	AJM1 (ENSDCDG00000027154)	MAPKAP1 (ENSDCDG00000027163)	ENSDCDG00000027173	mvb12ba (ENSDCDG00000027181)	lmx1ba (ENSDCDG00000027182)	zbtb43 (ENSDCDG00000027184)	RALGPS1 (ENSDCDG00000027193)	angptl2a (ENSDCDG00000027249)	fbxw2 (ENSDCDG00000027250)	ncs1a (ENSDCDG00000027251)	gpr107 (ENSDCDG00000027253) #32	crata (ENSDCDG00000027328) #21	ptpa (ENSDCDG00000027993) #22	ier5l (ENSDCDG00000028362) #23	ntmt1 (ENSDCDG00000028367) #24	ndor1 (ENSDCDG00000028380)	lrsam1 (ENSDCDG00000028407)	rpl12 (ENSDCDG00000028508)	pole3 (ENSDCDG00000028534)	ENSDCDG00000028537	ccn1l1 (ENSDCDG00000028541)	lmo4a (ENSDCDG00000028675)	ENSDCDG00000028678	ENSDCDG00000028697	fpgs (ENSDCDG00000028799)	cdk9 (ENSDCDG00000029739)	CRB2 (ENSDCDG00000029740)	DENND1A (ENSDCDG00000029744)
Atlantic herring	MODERN SPECIES	3	spout1 (ENSCHAG00000025977) #11	nsa2 (ENSCHAG00000025990)	tor1 (ENSCHAG00000025993) #28	ST6GALNAC6 (ENSCHAG00000025999)	miga2 (ENSCHAG00000026011) #19	dolpp1 (ENSCHAG00000026063) #20	ENSCHAG00000026067	ENSCHAG00000026083	zbtb43 (ENSCHAG00000002356)	RALGPS1 (ENSCHAG00000002473)	angptl2a (ENSCHAG00000003585)	fbxw2 (ENSCHAG00000003600)	ncs1a (ENSCHAG00000003645)	gpr107 (ENSCHAG00000003724) #32	crata (ENSCHAG00000003848) #21	ptpa (ENSCHAG00000004320) #22	ier5l (ENSCHAG00000004832) #23	ntmt1 (ENSCHAG00000004859) #24	ndor1 (ENSCHAG00000004879)	lrsam1 (ENSCHAG00000005132)	rpl12 (ENSCHAG00000005485)	pole3 (ENSCHAG00000005619)	ccn1l1 (ENSCHAG00000005656)	lmo4a (ENSCHAG00000005730)	ENSCHAG00000005749	ENSCHAG00000005894	fpgs (ENSCHAG00000006452)	cdk9 (ENSCHAG00000007237)	CRB2 (ENSCHAG00000007287)	DENND1A (ENSCHAG00000007433)	LHX2 (ENSCHAG00000009120)
Otophysi	ANCESTRAL SPECIES	100	ENSGT01070000253744.b.b.f	ENSGT00940000165492.a.a	ENSGT00390000020276.mb.b	ENSGT00940000154394.b.a.a.b.b	ENSGT00940000164907.b.b	ENSGT00940000155151.a.a.b	ENSGT00940000164386	ENSGT00390000006922	ENSGT00930000151044	ENSGT00530000064286	ENSGT00940000155151.a.a.a	ENSGT00940000164907.b.a	ENSGT00620000089226	ENSGT00940000154394.b.a.a.a.a.a.b	ENSGT01060000248556.A.a.a.a.b.a #21	ENSGT00390000011500 #22	ENSGT00900000141021.b.a.d #23	ENSGT00390000008371.b #24	ENSGT00930000151050	ENSGT00940000160451 #32	ENSGT00940000154645.B	ENSGT00930000151016	ENSGT00390000001195.a.b	ENSGT00940000159777	ENSGT00940000155735.r	ENSGT00420000029890	ENSGT00940000155845.t	ENSGT00940000159368.a	ENSGT00390000009869	ENSGT00940000158501.d.a	ENSGT00390000009566
Characiphysae	ANCESTRAL SPECIES	142	ENSGT00940000158865	ENSGT00940000154886.a.b	ENSGT00940000154821.a.a	ENSGT01070000253744.b.b.f	ENSGT00940000165492.a.a	ENSGT00390000020276.mb.b	ENSGT00390000020276.mb.a	ENSGT00940000154394.b.a.a.a.b.a.b	ENSGT00940000164907.b.b	ENSGT00940000155151.a.a.b	ENSGT00940000164386	ENSGT00390000006922	ENSGT00930000151044	ENSGT00530000064286	ENSGT01060000248556.A.a.a.a.b.a #21	ENSGT00390000011500 #22	ENSGT00900000141021.b.a.d #23	ENSGT00390000008371.b #24	ENSGT00930000151050	ENSGT00940000160451 #32	ENSGT00940000154645.B	ENSGT00930000151016	ENSGT00390000001195.a.b	ENSGT00940000159777	ENSGT00940000155567	ENSGT00390000012762.v	ENSGT00940000155882.a.b.b	ENSGT00940000164626.b.b.c.a
Channel catfish	MODERN SPECIES	20	kyat1 (ENSIPUG00000007957) #12	prkaa1 (ENSIPUG00000007912)	ENSIPUG00000007883	ENSIPUG00000007855	NPFFR2 (ENSIPUG00000007782)	ENSIPUG00000007759	ENSIPUG00000007750	ENSIPUG00000007738	lmo4a (ENSIPUG00000007705)	ccn1l1 (ENSIPUG00000007680)	pole3 (ENSIPUG00000007668)	rpl12 (ENSIPUG00000007575)	Lrsam1 (ENSIPUG00000007487)	ENSIPUG00000007367	crat (ENSIPUG00000007250) #21	ptpa (ENSIPUG00000007164) #22	ier5l (ENSIPUG00000007148) #23	ntmt1 (ENSIPUG00000007083) #24	ENSIPUG00000007066	ndor1 (ENSIPUG00000006992)	gpr107 (ENSIPUG00000006957) #32	ncs1 (ENSIPUG00000006898)	ENSIPUG00000006858	fbxw2 (ENSIPUG00000006792)	GAS1 (ENSIPUG00000006779)	c9 (ENSIPUG00000006737)	dab2 (ENSIPUG00000006718)	hspb15 (ENSIPUG00000006686)	ENSIPUG00000006653	cabp7 (ENSIPUG00000006642)	zmat5 (ENSIPUG00000006633)
Characiphysae_b	ANCESTRAL SPECIES	43	ENSGT00390000006980	ENSGT00940000158797 #12	ENSGT00940000158865	ENSGT00940000154886.a.b	ENSGT00940000154821.a.a	ENSGT01070000253744.b.b.f	ENSGT00390000020276.mb.a	ENSGT00940000154394.b.a.a.a.b.a.b	ENSGT00940000164907.b.b	ENSGT00940000155151.a.a.b	ENSGT00940000164386	ENSGT00390000006922	ENSGT00930000151044	ENSGT00530000064286	ENSGT01060000248556.A.a.a.a.b.a #21	ENSGT00390000011500 #22	ENSGT00900000141021.b.a.d #23	ENSGT00390000008371.b #24	ENSGT00930000151050	ENSGT00940000160451 #32	ENSGT00940000154645.B	ENSGT00930000151016	ENSGT00390000001195.a.b	ENSGT00940000159777	ENSGT00940000155567	ENSGT00940000155882.a.b.b	ENSGT00940000164626.b.b.c.a	ENSGT00940000155735.r	ENSGT00420000029890	ENSGT00940000155845.t	ENSGT00940000159368.a
Characoidei	ANCESTRAL SPECIES	69	ENSGT00940000155193	ENSGT00530000064194	ENSGT00390000006980	ENSGT00940000158797 #12	ENSGT00940000158865	ENSGT00940000154886.a.b	ENSGT00940000154821.a.a	ENSGT01070000253744.b.b.f	ENSGT00940000164907.b.b	ENSGT00940000155151.a.a.b	ENSGT00940000164386	ENSGT00390000006922	ENSGT00930000151044	ENSGT00530000064286	ENSGT01060000248556.A.a.a.a.b.a #21	ENSGT00390000011500 #22	ENSGT00900000141021.b.a.d #23	ENSGT00390000008371.b #24	ENSGT00930000151050	ENSGT00940000160451 #32	ENSGT00940000154645.B	ENSGT00930000151016	ENSGT00390000001195.a.b	ENSGT00940000159777	ENSGT00940000155567	ENSGT00940000155882.a.b.b
Mexicana tetra	MODERN SPECIES	119											pole3 (ENSAMXG00000033855)	rpl12 (ENSAMXG00000012766)	lrsam1 (ENSAMXG00000012781)	ENSAMXG00000012799	crata (ENSAMXG00000012819) #21	ptpa (ENSAMXG00000033525) #22	ier5l (ENSAMXG00000025651) #23	ntmt1 (ENSAMXG00000012851) #24	ndor1 (ENSAMXG00000012864)	gpr107 (ENSAMXG00000012900) #32
Red-bellied piranha	MODERN SPECIES	2					NPFFR2 (ENSPNAG00000024089)	ENSPNAG00000024069	ENSPNAG00000024010	zgc:55461 (ENSPNAG00000023984)	lmo4a (ENSPNAG00000023937)	ccn1l1 (ENSPNAG00000023906)	pole3 (ENSPNAG00000023860)	rpl12 (ENSPNAG00000023834)	lrsam1 (ENSPNAG00000023778)	ENSPNAG00000023633	crata (ENSPNAG00000023586) #21	ptpa (ENSPNAG00000023503) #22	ier5l (ENSPNAG00000023424) #23	ntmt1 (ENSPNAG00000023338) #24	ndor1 (ENSPNAG00000023402)	gpr107 (ENSPNAG00000023306) #32	ncs1a (ENSPNAG00000023289)	fbxw2 (ENSPNAG00000023239)	gas1b (ENSPNAG00000023216)	c9 (ENSPNAG00000023200)	ENSPNAG00000023180	ENSPNAG00000023158	hspb15 (ENSPNAG00000023148)	oxt (ENSPNAG00000023140)	DQX1 (ENSPNAG00000023120)	EDF1 (ENSPNAG00000023090)	ENSPNAG00000023073
Electric eel	MODERN SPECIES	29	surf1 (ENSEEEG00000014996)	surf6 (ENSEEEG00000014997)	kyat1 (ENSEEEG00000014998) #12	prkaa1 (ENSEEEG00000015011)	ENSEEEG00000015021	ENSEEEG00000015040	NPFFR2 (ENSEEEG00000015048)	ENSEEEG00000015134	ENSEEEG00000015143	lmo4a (ENSEEEG00000015152)	ccn1l1 (ENSEEEG00000015155)	pole3 (ENSEEEG00000015165)	rpl12 (ENSEEEG00000015168)	lrsam1 (ENSEEEG00000015206)	crata (ENSEEEG00000015351) #21	ptpa (ENSEEEG00000015855) #22	ier5l (ENSEEEG00000016141) #23	ntmt1 (ENSEEEG00000016143) #24	ndor1 (ENSEEEG00000016145)	gpr107 (ENSEEEG00000016155) #32	ncs1a (ENSEEEG00000016162)	capga (ENSEEEG00000016178)	ENSEEEG00000016190	tp53 (ENSEEEG00000016191)	gps2 (ENSEEEG00000016194)	gabarapa (ENSEEEG00000016196)	ctdnep1a (ENSEEEG00000016202)	phf23a (ENSEEEG00000016207)	plscr3a (ENSEEEG00000016210)	senp3a (ENSEEEG00000016211)	eif4a1b (ENSEEEG00000016231)
Cyprinoidei	ANCESTRAL SPECIES	19	ENSGT00390000020276.mb.b	ENSGT00390000020276.mb.a	ENSGT00940000154394.b.a.a.a.b.a.b	ENSGT00940000154394.b.a.a.b.b.c.b	ENSGT00940000164907.b.b	ENSGT00940000155151.a.a.b	ENSGT00940000164386	ENSGT00390000006922	ENSGT00930000151044	ENSGT00530000064286	ENSGT00940000155151.a.a.a	ENSGT00940000164907.b.a	ENSGT00620000089226	ENSGT00940000154394.b.a.a.a.a.a.b	ENSGT01060000248556.A.a.a.a.b.a #21	ENSGT00390000011500 #22	ENSGT00900000141021.b.a.d #23	ENSGT00390000008371.b #24	ENSGT00930000151050	ENSGT00940000160451 #32	ENSGT00940000154645.B	ENSGT00940000164697.b	ENSGT00530000064359.c.b.h	ENSGT00930000151016	ENSGT00390000001195.a.b	ENSGT00940000159777	ENSGT00940000155735.r	ENSGT00420000029890	ENSGT00940000155845.t	ENSGT00940000159368.a	ENSGT00390000009869
Cyprininae	DUPLICATION
Cyprininae	ANCESTRAL SPECIES	48	ENSGT00940000158865.p	ENSGT00940000154886.a.b.l	ENSGT00940000154821.a.a.b	ENSGT01070000253744.b.b.f	ENSGT00940000165492.a.a.c.b	ENSGT00940000165492.a.a.d	ENSGT00390000020276.mb.a	ENSGT00940000154394.b.a.a.a.b.a.b	ENSGT00940000164907.b.b.b.a	ENSGT00940000155151.a.a.b.b	ENSGT00940000164386.e	ENSGT00390000006922.c	ENSGT00930000151044.b	ENSGT00530000064286.n	ENSGT01060000248556.A.a.a.a.b.a.d #21	ENSGT00390000011500.e #22	ENSGT00900000141021.b.a.d.d #23	ENSGT00390000008371.b.d #24	ENSGT00930000151050.a	ENSGT00940000160451.a #32	ENSGT00940000154645.B.i.a	ENSGT00930000151016.z	ENSGT00390000001195.a.b.b	ENSGT00940000159777	ENSGT00940000155567.w.b	ENSGT00940000164626.b.b.c.a.e	ENSGT00940000155882.a.b.b.f	ENSGT00940000155735.r.gb	ENSGT00420000029890.a	ENSGT00940000155845.t.b	ENSGT00940000159368.a.f
Cyprininae_a	ANCESTRAL SPECIES	22	ENSGT00390000006980.d	ENSGT00940000158797.u #12	ENSGT00940000158865.p	ENSGT00940000154886.a.b.l	ENSGT00940000154821.a.a.b	ENSGT01070000253744.b.b.f	ENSGT00940000165492.a.a.c.b	ENSGT00940000154394.b.a.a.b.b.c.b	ENSGT00940000164907.b.b.b.a	ENSGT00940000155151.a.a.b.b	ENSGT00940000164386.e	ENSGT00390000006922.c	ENSGT00930000151044.b	ENSGT00530000064286.n	ENSGT01060000248556.A.a.a.a.b.a.d #21	ENSGT00390000011500.e #22	ENSGT00900000141021.b.a.d.d #23	ENSGT00390000008371.b.d #24	ENSGT00930000151050.a	ENSGT00940000160451.a #32	ENSGT00940000154645.B.i.a	ENSGT00930000151016.z	ENSGT00390000001195.a.b.b	ENSGT00940000159777	ENSGT00940000155567.w.b	ENSGT00940000164626.b.b.c.a.e	ENSGT00940000155882.a.b.b.f	ENSGT00420000029890.a	ENSGT00940000155845.t.b	ENSGT00940000159368.a.f	ENSGT00390000009869.a
Golden-line barbel	MODERN SPECIES	11	prkaa1 (ENSSGRG00000046663)	ENSSGRG00000046776	ENSSGRG00000046777	ENSSGRG00000046778	NPFFR2 (ENSSGRG00000046781)	ENSSGRG00000046830	ENSSGRG00000046831	ENSSGRG00000046834	ENSSGRG00000046838	lmo4a (ENSSGRG00000046844)	ccn1l1 (ENSSGRG00000046845)	pole3 (ENSSGRG00000046846)	rpl12 (ENSSGRG00000046847)	lrsam1 (ENSSGRG00000046852)	crata (ENSSGRG00000001397) #21	ptpa (ENSSGRG00000003585) #22	ier5l (ENSSGRG00000005440) #23	ntmt1 (ENSSGRG00000005442) #24	ndor1 (ENSSGRG00000005492)	gpr107 (ENSSGRG00000006218) #32	ncs1a (ENSSGRG00000006493)	fbxw2 (ENSSGRG00000006505)	gas1b (ENSSGRG00000006506)	c9 (ENSSGRG00000006507)	dab2 (ENSSGRG00000006535)	hspb15 (ENSSGRG00000006546)	ENSSGRG00000006569	ENSSGRG00000007534	m17 (ENSSGRG00000007538)	tescb (ENSSGRG00000007539)	ENSSGRG00000007547
Common carp reference	MODERN SPECIES	15	surf1 (ENSCCRG00000034272)	kyat1 (ENSCCRG00000081468) #12	prkaa1 (ENSCCRG00000034210)	ENSCCRG00000056731	ENSCCRG00000001587	ENSCCRG00000050873	ENSCCRG00000030567	zgc:55461 (ENSCCRG00000028081)	lmo4a (ENSCCRG00000035744)	ccn1l1 (ENSCCRG00000024280)	pole3 (ENSCCRG00000054380)	rpl12 (ENSCCRG00000035688)	lrsam1 (ENSCCRG00000024030)	ENSCCRG00000024040	crata (ENSCCRG00000024065) #21	ptpa (ENSCCRG00000025867) #22	ier5l (ENSCCRG00000057758) #23	ntmt1 (ENSCCRG00000058345) #24	ndor1 (ENSCCRG00000032106)	gpr107 (ENSCCRG00000032112) #32	ncs1a (ENSCCRG00000032121)	fbxw2 (ENSCCRG00000074424)	c9 (ENSCCRG00000032128)	dab2 (ENSCCRG00000032132)	ENSCCRG00000060779	ENSCCRG00000059079	ENSCCRG00000078969	ENSCCRG00000078355	m17 (ENSCCRG00000059903)	tescb (ENSCCRG00000013896)	ENSCCRG00000072451
Goldfish	MODERN SPECIES	23	surf6 (ENSCARG00000059875)	kyat1 (ENSCARG00000059358) #12	prkaa1 (ENSCARG00000059027)	ENSCARG00000059013	NPFFR2 (ENSCARG00000059007)	ENSCARG00000058950	ENSCARG00000058849	ENSCARG00000058801	lmo4a (ENSCARG00000058713)	ccn1l1 (ENSCARG00000058690)	pole3 (ENSCARG00000058656)	rpl12 (ENSCARG00000058517)	lrsam1 (ENSCARG00000057109)	ENSCARG00000057036	crata (ENSCARG00000055185) #21	ptpa (ENSCARG00000054252) #22	ier5l (ENSCARG00000054199) #23	ntmt1 (ENSCARG00000054134) #24	ndor1 (ENSCARG00000054025)	gpr107 (ENSCARG00000053925) #32	ncs1a (ENSCARG00000053890)	fbxw2 (ENSCARG00000053886)	gas1b (ENSCARG00000053873)	c9 (ENSCARG00000053807)	dab2 (ENSCARG00000053753)	hspb15 (ENSCARG00000053678)	ENSCARG00000053479	ENSCARG00000053229	ENSCARG00000053135	ENSCARG00000053111	ENSCARG00000053094
Cyprininae	ANCESTRAL SPECIES		ENSGT00530000064194.g	ENSGT00390000006980.c	ENSGT00940000158797.v #12	ENSGT00950000182857.a.b	ENSGT00940000158865.o	ENSGT00940000154886.a.b.k	ENSGT00940000154821.a.a.a	ENSGT00940000165492.a.a.c.a	ENSGT00940000154394.b.a.a.b.b.c.b	ENSGT00940000164907.b.b.b.b	ENSGT00940000155151.a.a.b.a	ENSGT00940000164386.f	ENSGT00390000006922.d	ENSGT00930000151044.a	ENSGT01060000248556.A.a.a.a.b.a.c #21	ENSGT00390000011500.f #22	ENSGT00900000141021.b.a.d.c #23	ENSGT00390000008371.b.c #24	ENSGT00930000151050.b	ENSGT00940000160451.b #32	ENSGT00940000154645.B.i.b	ENSGT00930000151016.y	ENSGT00390000001195.a.b.a	ENSGT00940000155567.w.a	ENSGT00940000155882.a.b.b.e	ENSGT00940000164626.b.b.c.a.f	ENSGT00940000155735.r.fb	ENSGT00420000029890.b	ENSGT00940000155845.t.a	ENSGT00940000159368.a.e	ENSGT00390000009869.b
Goldfish	MODERN SPECIES	44	zgc:103692 (ENSCARG00000000655) #29	med22 (ENSCARG00000000632)	RPL7A (ENSCARG00000000600)	surf1 (ENSCARG00000000586)	ENSCARG00000000581	prkaa1 (ENSCARG00000000442)	ENSCARG00000000336	ENSCARG00000000301	ENSCARG00000000244	lmo4a (ENSCARG00000000232)	ccn1l1 (ENSCARG00000000221)	pole3 (ENSCARG00000000215)	rpl12 (ENSCARG00000000170)	lrsam1 (ENSCARG00000015688)	crata (ENSCARG00000014355) #21	ptpa (ENSCARG00000014256) #22	ier5l (ENSCARG00000014243) #23	ENSCARG00000014240	ntmt1 (ENSCARG00000014228) #24	gpr107 (ENSCARG00000014211) #32	ncs1a (ENSCARG00000014199)	fbxw2 (ENSCARG00000014196)	gas1b (ENSCARG00000014190)	dab2 (ENSCARG00000014173)	hspb15 (ENSCARG00000014158)	ENSCARG00000013314	ENSCARG00000013006	ENSCARG00000012967	m17 (ENSCARG00000012960)	tescb (ENSCARG00000012951)	CABP7 (ENSCARG00000012947)
Cyprininae_a	ANCESTRAL SPECIES		ENSGT00530000064194.g	ENSGT00390000006980.c	ENSGT00940000158797.v #12	ENSGT00950000182857.a.b	ENSGT00940000158865.o	ENSGT00940000154886.a.b.k	ENSGT00940000154821.a.a.a	ENSGT00940000165492.a.a.c.a	ENSGT00940000154394.b.a.a.b.b.c.a	ENSGT00940000164907.b.b.b.b	ENSGT00940000155151.a.a.b.a	ENSGT00940000164386.f	ENSGT00390000006922.d	ENSGT00930000151044.a	ENSGT01060000248556.A.a.a.a.b.a.c #21	ENSGT00390000011500.f #22	ENSGT00900000141021.b.a.d.c #23	ENSGT00390000008371.b.c #24	ENSGT00930000151050.b	ENSGT00940000160451.b #32	ENSGT00940000163010.u.b #33	ENSGT00930000151016.y	ENSGT00390000001195.a.b.a	ENSGT00940000155567.w.a	ENSGT00940000155882.a.b.b.e	ENSGT00940000164626.b.b.c.a.f	ENSGT00940000155735.r.fb	ENSGT00420000029890.b	ENSGT00940000155845.t.a	ENSGT00940000159368.a.e	ENSGT00390000009869.b
Common carp reference	MODERN SPECIES	7	surf1 (ENSCCRG00000081884)	RPL7A (ENSCCRG00000034022)	kyat1 (ENSCCRG00000062125) #12	prkaa1 (ENSCCRG00000078593)	ENSCCRG00000031194	ENSCCRG00000055438	ENSCCRG00000052661	ENSCCRG00000031181	ENSCCRG00000054308	lmo4a (ENSCCRG00000075174)	ccn1l1 (ENSCCRG00000035740)	pole3 (ENSCCRG00000080860)	rpl12 (ENSCCRG00000071587)	lrsam1 (ENSCCRG00000034301)	crata (ENSCCRG00000031927) #21	ptpa (ENSCCRG00000031445) #22	ntmt1 (ENSCCRG00000043894) #24	gpr107 (ENSCCRG00000043862) #32	ENSCCRG00000071330 #33	fbxw2 (ENSCCRG00000053560)	dab2 (ENSCCRG00000026586)	ENSCCRG00000056047	ENSCCRG00000072823	ENSCCRG00000013876	m17 (ENSCCRG00000013882)	tescb (ENSCCRG00000071303)	ENSCCRG00000013913	zmat5 (ENSCCRG00000074583)	arpc5lb (ENSCCRG00000063903)	ENSCCRG00000053489	SCAI (ENSCCRG00000015472)
Golden-line barbel	MODERN SPECIES	91	surf1 (ENSSGRG00000016901)	surf6 (ENSSGRG00000016898)	kyat1 (ENSSGRG00000016230) #12	ifitm1 (ENSSGRG00000016208)	prkaa1 (ENSSGRG00000016198)	ENSSGRG00000016196	ENSSGRG00000016195	ENSSGRG00000016154	zgc:55461 (ENSSGRG00000016148)	lmo4a (ENSSGRG00000016145)	ccn1l1 (ENSSGRG00000016144)	pole3 (ENSSGRG00000016141)	rpl12 (ENSSGRG00000016092)	lrsam1 (ENSSGRG00000016091)	crata (ENSSGRG00000015586) #21	ptpa (ENSSGRG00000015567) #22	ier5l (ENSSGRG00000015565) #23	ntmt1 (ENSSGRG00000015561) #24	ndor1 (ENSSGRG00000015544)	gpr107 (ENSSGRG00000015537) #32	fbxw2 (ENSSGRG00000015532)	gas1b (ENSSGRG00000015530)	ENSSGRG00000015528	dab2 (ENSSGRG00000015508)	hspb15 (ENSSGRG00000015504)	ENSSGRG00000015499	ENSSGRG00000015492	m17 (ENSSGRG00000015489)	tescb (ENSSGRG00000015488)	CABP7 (ENSSGRG00000015487)	zmat5 (ENSSGRG00000015486)
Zebrafish	MODERN SPECIES	20	kyat1 (ENSDARG00000023645) #12	ifitm1 (ENSDARG00000093303)	prkaa1 (ENSDARG00000060596)	ENSDARG00000060584	ENSDARG00000060578	NPFFR2 (ENSDARG00000060702)	ENSDARG00000041724	zgc:55461 (ENSDARG00000041723)	lmo4a (ENSDARG00000013853)	ccn1l1 (ENSDARG00000035422)	pole3 (ENSDARG00000008551)	rpl12 (ENSDARG00000006691)	lrsam1 (ENSDARG00000060683)	ENSDARG00000095142	crata (ENSDARG00000040248) #21	ptpa (ENSDARG00000031985) #22	ier5l (ENSDARG00000054906) #23	ntmt1 (ENSDARG00000022399) #24	ndor1 (ENSDARG00000007429)	gpr107 (ENSDARG00000103200) #32	ncs1a (ENSDARG00000055229)	fbxw2 (ENSDARG00000009745)	gas1b (ENSDARG00000067984)	c9 (ENSDARG00000016319)	dab2 (ENSDARG00000031761)	hspb15 (ENSDARG00000078411)	myhz1.1 (ENSDARG00000067990)	myhz1.2 (ENSDARG00000067995)	ENSDARG00000067997	ENSDARG00000095885	ENSDARG00000095930
Euteleosteomorpha	ANCESTRAL SPECIES	293															ENSGT01060000248556.A.a.a.a.b.a #21	ENSGT00390000011500 #22	ENSGT00900000141021.b.a.d #23	ENSGT00390000008371.b #24	ENSGT00930000151050	ENSGT00930000151044	ENSGT00940000170916	ENSGT00390000006922	ENSGT00940000164386	ENSGT00940000155151.a.a.b	ENSGT00940000164907.b.b	ENSGT00940000154394.b.a.a.b.b	ENSGT00940000165492.a.a
Acanthomorphata	ANCESTRAL SPECIES	277											ENSGT00940000155945.i.a	ENSGT00940000164541	ENSGT00390000000642	ENSGT00390000016543.d	ENSGT01060000248556.A.a.a.a.b.a #21	ENSGT00390000011500 #22	ENSGT00900000141021.b.a.d #23	ENSGT00390000008371.b #24	ENSGT00930000151050	ENSGT00930000151044	ENSGT00940000164907.b.b
Euacanthomorphacea	ANCESTRAL SPECIES	54												ENSGT00940000155945.i.a	ENSGT00390000000642	ENSGT00390000016543.d	ENSGT01060000248556.A.a.a.a.b.a #21	ENSGT00390000011500 #22	ENSGT00900000141021.b.a.d #23	ENSGT00390000008371.b #24	ENSGT00930000151050	ENSGT00930000151044	ENSGT00940000164907.b.b	ENSGT00940000155373	ENSGT00390000016526	ENSGT00390000007918	ENSGT00390000006320	ENSGT00940000155464.a.a	ENSGT00440000033609.w	ENSGT00940000156114.c	ENSGT00940000159579	ENSGT00940000158503	ENSGT00940000158674 #9
Percomorphaceae	ANCESTRAL SPECIES	42														ENSGT00940000165259.a	ENSGT01060000248556.A.a.a.a.b.a.a #21	ENSGT00390000011500 #22	ENSGT00900000141021.b.a.d #23	ENSGT00390000008371.b #24	ENSGT00930000151050	ENSGT00930000151044	ENSGT00940000164907.b.b	ENSGT00940000155373	ENSGT00390000016526	ENSGT00390000007918	ENSGT00390000006320	ENSGT00940000155464.a.a	ENSGT00440000033609.w	ENSGT00940000156114.c	ENSGT00940000159579	ENSGT00940000158503	ENSGT00940000158674 #9
Percomorphaceae_B	ANCESTRAL SPECIES	16	ENSGT00390000013355	ENSGT01100000263483.A.g.b	ENSGT01100000263541.a.b.k	ENSGT00940000166301	ENSGT00940000158867	ENSGT00940000153832	ENSGT00950000183005.a.b	ENSGT00390000008823	ENSGT00940000155053.c.b	ENSGT00390000001566	ENSGT00410000029051	ENSGT00940000159383	ENSGT00940000165922	ENSGT00940000165259.a	ENSGT01060000248556.A.a.a.a.b.a.a #21	ENSGT00390000011500 #22	ENSGT00900000141021.b.a.d #23	ENSGT00390000008371.b #24	ENSGT00930000151050	ENSGT00930000151044	ENSGT00940000164907.b.b	ENSGT00940000155373	ENSGT00390000016526	ENSGT00390000007918	ENSGT00390000006320	ENSGT00940000155464.a.a	ENSGT00440000033609.w	ENSGT00940000156114.c	ENSGT00940000159579	ENSGT00940000158503	ENSGT00940000158674 #9
Ovalentaria	ANCESTRAL SPECIES	16	ENSGT00390000013355	ENSGT01100000263483.A.g.b	ENSGT01100000263541.a.b.k	ENSGT00940000166301	ENSGT00940000158867	ENSGT00940000153832	ENSGT00950000183005.a.b	ENSGT00390000008823	ENSGT00940000155053.c.b	ENSGT00390000001566	ENSGT00410000029051	ENSGT00940000159383	ENSGT00940000165922	ENSGT00940000165259.a	ENSGT01060000248556.A.a.a.a.b.a.a #21	ENSGT00390000011500 #22	ENSGT00900000141021.b.a.d #23	ENSGT00390000008371.b #24	ENSGT00930000151050	ENSGT00930000151044	ENSGT00940000164907.b.b	ENSGT00940000155373	ENSGT00390000016526	ENSGT00450000040324.b.n	ENSGT00940000156811.b	ENSGT00390000001098	ENSGT00940000158633.a	ENSGT00940000177239	ENSGT00940000155841.c.b #18	ENSGT00530000063187.A #8	ENSGT00940000158674 #9
Atherinomorphae	ANCESTRAL SPECIES	28	ENSGT00940000156081.j	ENSGT00940000168229	ENSGT00950000182925.B.b	ENSGT00390000013355	ENSGT00940000166301	ENSGT00940000158867	ENSGT00940000153832	ENSGT00950000183005.a.b	ENSGT00940000170723	ENSGT00940000155053.c.b	ENSGT00390000001566	ENSGT00940000159383	ENSGT00940000165922	ENSGT00940000165259.a	ENSGT01060000248556.A.a.a.a.b.a.a #21	ENSGT00390000011500 #22	ENSGT00900000141021.b.a.d #23	ENSGT00390000008371.b #24	ENSGT00930000151050	ENSGT00930000151044	ENSGT00940000164907.b.b	ENSGT00940000155373	ENSGT00390000016526	ENSGT00450000040324.b.n	ENSGT00940000156811.b	ENSGT00390000001098	ENSGT00940000158633.a	ENSGT00940000177239	ENSGT00940000155841.c.b #18	ENSGT00530000063187.A #8	ENSGT00940000158674 #9
Cyprinodontiformes	ANCESTRAL SPECIES	27	ENSGT00940000156081.j	ENSGT00940000168229	ENSGT00950000182925.B.b	ENSGT00390000013355	ENSGT00940000166301	ENSGT00940000158867	ENSGT00940000153832.j	ENSGT00950000183005.a.b	ENSGT00940000170723	ENSGT00940000155053.c.b	ENSGT00390000001566	ENSGT00940000159383	ENSGT00940000165922	ENSGT00940000165259.a	ENSGT01060000248556.A.a.a.a.b.a.a #21	ENSGT00390000011500 #22	ENSGT00900000141021.b.a.d #23	ENSGT00390000008371.b #24	ENSGT00930000151050	ENSGT00930000151044	ENSGT00940000164907.b.b	ENSGT00940000155373	ENSGT00390000016526	ENSGT00450000040324.b.n	ENSGT00940000156811.b	ENSGT00390000001098	ENSGT00940000158633.a	ENSGT00940000177239	ENSGT00940000155841.c.b #18	ENSGT00530000063187.A #8	ENSGT00940000158674 #9
Cyprinodontoidei	ANCESTRAL SPECIES	33	ENSGT00940000159129	ENSGT01090000259997.a.d.b.a.a.a.a	ENSGT00940000158002	ENSGT00940000158867	ENSGT00940000153832.k	ENSGT00940000153832.j	ENSGT00950000183005.a.b	ENSGT00940000170723	ENSGT00940000155053.c.b	ENSGT00390000001566	ENSGT00390000012710.a.a	ENSGT00940000159383	ENSGT00940000165922	ENSGT00940000165259.a	ENSGT01060000248556.A.a.a.a.b.a.a #21	ENSGT00390000011500 #22	ENSGT00900000141021.b.a.d #23	ENSGT00390000008371.b #24	ENSGT00930000151050	ENSGT00930000151044	ENSGT00940000164907.b.b	ENSGT00940000155373	ENSGT00390000016526	ENSGT00450000040324.b.n	ENSGT00940000156811.b	ENSGT00390000001098	ENSGT00940000158633.a	ENSGT00940000177239	ENSGT00940000155841.c.b #18	ENSGT00530000063187.A #8	ENSGT00940000158674 #9
NAME_4	ANCESTRAL SPECIES	246															ENSGT01060000248556.A.a.a.a.b.a.a #21	ENSGT00390000011500 #22	ENSGT00900000141021.b.a.d #23	ENSGT00390000008371.b #24	ENSGT00930000151050	ENSGT00930000151044	ENSGT00940000164907.b.b	ENSGT00940000155373	ENSGT00390000016526	ENSGT00450000040324.b.n	ENSGT00940000156811.b	ENSGT00390000001098	ENSGT00940000158633.a	ENSGT00940000177239	ENSGT00940000155841.c.b #18	ENSGT00530000063187.A #8	ENSGT00940000158674 #9
Mummichog	MODERN SPECIES	548														ENSFHEG00000004374	tdgf1 (ENSFHEG00000004363)	ptpa (ENSFHEG00000004350) #22	ENSFHEG00000004312 #23	ntmt1 (ENSFHEG00000004248) #24	ndor1 (ENSFHEG00000004294)	lrsam1 (ENSFHEG00000004237)	lmo4a (ENSFHEG00000000105)	cdk9 (ENSFHEG00000004199)	fpgs (ENSFHEG00000004167)	naif1 (ENSFHEG00000004160)	eeig1b (ENSFHEG00000004150)	dpm2 (ENSFHEG00000004146)	PIP5KL1 (ENSFHEG00000004140)	ENSFHEG00000004138	SH3GLB2 (ENSFHEG00000004132) #18	zer1 (ENSFHEG00000004098) #8
Sheepshead minnow	MODERN SPECIES	926															crata (ENSCVAG00000013442) #21	ptpa (ENSCVAG00000013362) #22	ier5l (ENSCVAG00000013340) #23	ntmt1 (ENSCVAG00000013334) #24	ENSCVAG00000013311	ENSCVAG00000013290	ENSCVAG00000013283	lrsam1 (ENSCVAG00000013278)	ENSCVAG00000013226	lmo4a (ENSCVAG00000013215)
Poeciliinae	ANCESTRAL SPECIES	12	ENSGT00650000094751	ENSGT00940000159129	ENSGT00940000158002	ENSGT00940000158867	ENSGT00940000153832.k	ENSGT00940000153832.j	ENSGT00950000183005.a.b	ENSGT00940000170723	ENSGT00940000155053.c.b	ENSGT00390000001566	ENSGT00390000012710.a.a	ENSGT00940000159383	ENSGT00940000165922	ENSGT00940000165259.a	ENSGT01060000248556.A.a.a.a.b.a.a #21	ENSGT00390000011500 #22	ENSGT00900000141021.b.a.d #23	ENSGT00390000008371.b #24	ENSGT00930000151050	ENSGT00930000151044	ENSGT00940000164907.b.b	ENSGT00940000155373	ENSGT00390000016526	ENSGT00450000040324.b.n	ENSGT00940000156811.b	ENSGT00390000001098	ENSGT00940000158633.a	ENSGT00940000177239	ENSGT00940000155841.c.b #18	ENSGT00530000063187.A #8	ENSGT00940000158674 #9
Poecilia	ANCESTRAL SPECIES	53				ENSGT00940000158867.e	ENSGT00940000153832.k.a	ENSGT00940000153832.j	ENSGT00950000183005.a.b	ENSGT00940000170723	ENSGT00940000155053.c.b	ENSGT00390000001566	ENSGT00390000012710.a.a	ENSGT00940000159383	ENSGT00940000165922	ENSGT00940000165259.a	ENSGT01060000248556.A.a.a.a.b.a.a #21	ENSGT00390000011500 #22	ENSGT00900000141021.b.a.d #23	ENSGT00390000008371.b #24	ENSGT00930000151050	ENSGT00930000151044	ENSGT00940000164907.b.b	ENSGT00940000155373	ENSGT00390000016526	ENSGT00450000040324.b.n	ENSGT00940000156811.b	ENSGT00390000001098	ENSGT00940000158633.a	ENSGT00940000155841.c.b #18	ENSGT00530000063187.A #8	ENSGT00940000158674 #9	ENSGT00500000044904.a.b.e.a.l.d.b.a.b.a.a.b
NAME_6	ANCESTRAL SPECIES	102			ENSGT00940000158867.e	ENSGT00940000153832.k.a.b	ENSGT00940000153832.j	ENSGT00950000183005.a.b	ENSGT00940000170723	ENSGT00940000155053.c.b	ENSGT00390000001566	ENSGT00940000153832.k.a.a	ENSGT00390000012710.a.a	ENSGT00940000159383	ENSGT00940000165922	ENSGT00940000165259.a	ENSGT01060000248556.A.a.a.a.b.a.a #21	ENSGT00390000011500 #22	ENSGT00900000141021.b.a.d #23	ENSGT00390000008371.b #24	ENSGT00930000151050	ENSGT00930000151044	ENSGT00940000164907.b.b	ENSGT00940000155373	ENSGT00390000016526	ENSGT00450000040324.b.n	ENSGT00940000156811.b	ENSGT00390000001098	ENSGT00940000158633.a	ENSGT00940000155841.c.b #18	ENSGT00530000063187.A #8	ENSGT00940000158674 #9	ENSGT00500000044904.a.b.e.a.l.d.b.a.b.a.a.b
Sailfin molly	MODERN SPECIES	833			ENSPLAG00000021558	LYZ (ENSPLAG00000020942)	mbd2 (ENSPLAG00000020914)	ENSPLAG00000020892	ENSPLAG00000020884	ENSPLAG00000020874	wdr91 (ENSPLAG00000020867)	ENSPLAG00000020827	ENSPLAG00000020448	ENSPLAG00000020440	june (ENSPLAG00000020426)	ENSPLAG00000020415	crata (ENSPLAG00000020394) #21	ptpa (ENSPLAG00000020359) #22	ier5l (ENSPLAG00000020321) #23	ntmt1 (ENSPLAG00000020317) #24	ndor1 (ENSPLAG00000020306)	lrsam1 (ENSPLAG00000020295)	ENSPLAG00000020279	cdk9 (ENSPLAG00000020266)	fpgs (ENSPLAG00000020216)	naif1 (ENSPLAG00000020208)	eeig1b (ENSPLAG00000020194)	dpm2 (ENSPLAG00000020150)	PIP5KL1 (ENSPLAG00000020138)	sh3glb2b (ENSPLAG00000020064) #18	zer1 (ENSPLAG00000020003) #8	TBC1D13 (ENSPLAG00000019931) #9	ENSPLAG00000019926
Amazon molly	MODERN SPECIES	618	dcc (ENSPFOG00000003746)	ENSPFOG00000003751	LYZ (ENSPFOG00000003804)	mbd2 (ENSPFOG00000003939)	ENSPFOG00000022838	ENSPFOG00000023507	ENSPFOG00000004014	wdr91 (ENSPFOG00000004035)	ENSPFOG00000004171	ENSPFOG00000020727	ENSPFOG00000004257	ENSPFOG00000004261	june (ENSPFOG00000004290)	ENSPFOG00000004298	crata (ENSPFOG00000004304) #21	ptpa (ENSPFOG00000004582) #22	ier5l (ENSPFOG00000004784) #23	ndor1 (ENSPFOG00000004857)	ntmt1 (ENSPFOG00000004796) #24	lrsam1 (ENSPFOG00000005042)	ENSPFOG00000005332	cdk9 (ENSPFOG00000005383)	fpgs (ENSPFOG00000005484)	naif1 (ENSPFOG00000005824)	eeig1b (ENSPFOG00000005838)	dpm2 (ENSPFOG00000006056)	PIP5KL1 (ENSPFOG00000006087)	sh3glb2b (ENSPFOG00000006128) #18	zer1 (ENSPFOG00000006341) #8	TBC1D13 (ENSPFOG00000006486) #9	thnsl2 (ENSPFOG00000006604)
Guppy	MODERN SPECIES	442														crata (ENSPREG00000007768) #21	ENSPREG00000007762 #21	ptpa (ENSPREG00000007716) #22	ENSPREG00000007702	ntmt1 (ENSPREG00000007690) #24	ndor1 (ENSPREG00000007661)	cdk9 (ENSPREG00000007624)	fpgs (ENSPREG00000007577)	naif1 (ENSPREG00000007551)	eeig1b (ENSPREG00000007540)	dpm2 (ENSPREG00000007530)	PIP5KL1 (ENSPREG00000007518)	SH3GLB2 (ENSPREG00000007359) #18	zer1 (ENSPREG00000007311) #8	TBC1D13 (ENSPREG00000007264) #9	ENSPREG00000007255	thnsl2 (ENSPREG00000007221)	DQX1 (ENSPREG00000007179)
Platyfish	MODERN SPECIES	22	ENSXMAG00000022384	ENSXMAG00000021652	ATP8B1 (ENSXMAG00000002723)	dcc (ENSXMAG00000003959)	LYZ (ENSXMAG00000024335)	LYZ (ENSXMAG00000011983)	mbd2 (ENSXMAG00000003932)	ENSXMAG00000023636	ENSXMAG00000029906	wdr91 (ENSXMAG00000003909)	ENSXMAG00000019552	ENSXMAG00000021919	june (ENSXMAG00000003906)	ENSXMAG00000003899	crata (ENSXMAG00000003884) #21	ptpa (ENSXMAG00000003872) #22	ntmt1 (ENSXMAG00000026764) #24	ndor1 (ENSXMAG00000003862)	lrsam1 (ENSXMAG00000017038)	ENSXMAG00000024489	cdk9 (ENSXMAG00000003838)	fpgs (ENSXMAG00000021390)	naif1 (ENSXMAG00000029708)	eeig1b (ENSXMAG00000028388)	dpm2 (ENSXMAG00000003825)	PIP5KL1 (ENSXMAG00000029474)	ENSXMAG00000023087	sh3glb2b (ENSXMAG00000003791) #18	zer1 (ENSXMAG00000003783) #8	TBC1D13 (ENSXMAG00000003778) #9	ENSXMAG00000028669
Aplocheiloidei	DUPLICATION
Aplocheiloidei	ANCESTRAL SPECIES																	ENSGT00390000011500.g #22
Mangrove rivulus	MODERN SPECIES	1613															ENSKMAG00000008135	ptpa (ENSKMAG00000008156) #22
Aplocheiloidei	ANCESTRAL SPECIES	74	ENSGT00940000168229	ENSGT00950000182925.B.b	ENSGT00390000013355	ENSGT00940000166301	ENSGT00940000158867	ENSGT00940000153832.j.a	ENSGT00950000183005.a.b	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b.td.b	ENSGT00940000170723	ENSGT00940000155053.c.b	ENSGT00390000001566	ENSGT00940000159383	ENSGT00940000165922	ENSGT00940000165259.a	ENSGT01060000248556.A.a.a.a.b.a.a #21	ENSGT00390000011500.h #22	ENSGT00900000141021.b.a.d #23	ENSGT00390000008371.b #24	ENSGT00930000151050	ENSGT00930000151044	ENSGT00940000164907.b.b	ENSGT00940000155373	ENSGT00390000016526	ENSGT00450000040324.b.n	ENSGT00940000156811.b	ENSGT00390000001098	ENSGT00940000158633.a	ENSGT00940000155841.c.b #18
Mangrove rivulus	MODERN SPECIES	1238																ENSKMAG00000007564 #22	ier5l (ENSKMAG00000007575) #23
Turquoise killifish	MODERN SPECIES	1611	ENSNFUG00015003793	GADD45G (ENSNFUG00015003791)	GADD45G (ENSNFUG00015003788)	SPIN1 (ENSNFUG00015003784)	DNAJC25 (ENSNFUG00015003783)	tdgf1 (ENSNFUG00015003782)	ENSNFUG00015003780	dcc (ENSNFUG00015003442)	LYZ (ENSNFUG00015003351)	MBD2 (ENSNFUG00015003349)	ENSNFUG00015003346	wdr91 (ENSNFUG00015003332)	THAP1 (ENSNFUG00015003323)	Nfu_g_1_018246 (ENSNFUG00015003321)	CRATA (ENSNFUG00015003294) #21	ptpa (ENSNFUG00015003271) #22	ier5l (ENSNFUG00015003268) #23	NTMT1 (ENSNFUG00015003262) #24	lrsam1 (ENSNFUG00015003125)	ENSNFUG00015003092	c6 (ENSNFUG00015003065)	rgs7bpb (ENSNFUG00015003052)	ENSNFUG00015003046	ENSNFUG00015003041	ZER1 (ENSNFUG00015002969) #8	TBC1D13 (ENSNFUG00015002932) #9	thnsl2 (ENSNFUG00015002919)	ENSNFUG00015002904	smyd1a (ENSNFUG00015002862)	SPR (ENSNFUG00015002844)	SLC1A3B (ENSNFUG00015002661)
Oryzias	ANCESTRAL SPECIES	46	ENSGT00940000155212.bb	ENSGT00940000156081.j	ENSGT00940000168229	ENSGT00950000182925.B.b	ENSGT00390000013355	ENSGT00940000166301	ENSGT00940000158867	ENSGT00940000153832	ENSGT00950000183005.a.b	ENSGT00940000170723	ENSGT00390000001566	ENSGT00940000159383	ENSGT00940000165922	ENSGT00940000165259.a	ENSGT01060000248556.A.a.a.a.b.a.a #21	ENSGT00390000011500 #22	ENSGT00900000141021.b.a.d #23	ENSGT00390000008371.b #24	ENSGT00930000151050	ENSGT00930000151044	ENSGT00940000164907.b.b	ENSGT00940000155373	ENSGT00390000016526	ENSGT00450000040324.b.n	ENSGT00940000156811.b	ENSGT00390000001098	ENSGT00940000161047	ENSGT01100000263514.B	ENSGT00940000155742.a.a	ENSGT00940000159700	ENSGT00390000003837
Oryzias_a	ANCESTRAL SPECIES	61	ENSGT00940000157778	ENSGT00940000156081.j	ENSGT00940000168229	ENSGT00950000182925.B.b	ENSGT00390000013355	ENSGT00940000166301	ENSGT00940000158867	ENSGT00940000153832	ENSGT00950000183005.a.b	ENSGT00940000170723	ENSGT00390000001566	ENSGT00940000159383	ENSGT00940000165922	ENSGT00940000165259.a	ENSGT01060000248556.A.a.a.a.b.a.a #21	ENSGT00390000011500 #22	ENSGT00900000141021.b.a.d #23	ENSGT00390000008371.b #24	ENSGT00930000151050	ENSGT00930000151044	ENSGT00940000164907.b.b	ENSGT00940000155373	ENSGT00390000016526	ENSGT00450000040324.b.n	ENSGT00390000001098	ENSGT00940000161047	ENSGT01100000263514.B	ENSGT00940000155742.a.a	ENSGT00980000198573.a.b.ab.b.a.b.a.a.b	ENSGT01060000248530.C.d.x.b.a.b.a	ENSGT00940000159700
Chinese medaka	DUPLICATION
Chinese medaka	MODERN SPECIES	4787																ptpa (ENSOSIG00000011838) #22
Chinese medaka	MODERN SPECIES	4288																ptpa (ENSOSIG00000013823) #22
Japanese Medaka HdrR	MODERN SPECIES	3	tdgf1 (ENSORLG00000026914)	dcc (ENSORLG00000015328)	ENSORLG00000024274	ENSORLG00000022025	lyz (ENSORLG00000015344)	mbd2 (ENSORLG00000024771)	ENSORLG00000030536	ENSORLG00000027233	ENSORLG00000022687	wdr91 (ENSORLG00000018761)	THAP1 (ENSORLG00000018779)	ENSORLG00000028912	june (ENSORLG00000018793)	ENSORLG00000023149	crata (ENSORLG00000026967) #21	ptpa (ENSORLG00000018790) #22	ier5l (ENSORLG00000026184) #23	ntmt1 (ENSORLG00000027700) #24	ndor1 (ENSORLG00000020185)	lrsam1 (ENSORLG00000025606)	lmo4a (ENSORLG00000022702)	cdk9 (ENSORLG00000018273)	fpgs (ENSORLG00000018278)	naif1 (ENSORLG00000018283)	ENSORLG00000030325	ENSORLG00000025973	dpm2 (ENSORLG00000018289)	psmb10 (ENSORLG00000018295)	ENSORLG00000018301	slc12a2 (ENSORLG00000019274)	ENSORLG00000029533
Oryzias_b	ANCESTRAL SPECIES	59	ENSGT00940000155212.bb	ENSGT00940000156081.j	ENSGT00940000168229	ENSGT00950000182925.B.b	ENSGT00390000013355	ENSGT00940000166301	ENSGT00940000158867	ENSGT00940000153832	ENSGT00950000183005.a.b	ENSGT00940000170723	ENSGT00390000001566	ENSGT00940000159383	ENSGT00940000165922	ENSGT00940000165259.a	ENSGT01060000248556.A.a.a.a.b.a.a #21	ENSGT00390000011500 #22	ENSGT00900000141021.b.a.d #23	ENSGT00390000008371.b #24	ENSGT00930000151050	ENSGT00930000151044	ENSGT00940000164907.b.b	ENSGT00940000155373	ENSGT00390000016526	ENSGT00450000040324.b.n	ENSGT00940000156811.b	ENSGT00390000001098	ENSGT00940000161047	ENSGT01100000263514.B	ENSGT00940000155742.a.a	ENSGT00940000159700	ENSGT00390000003837
Indian medaka	MODERN SPECIES	6	ENSOMEG00000004071	ENSOMEG00000004090	dnajc25 (ENSOMEG00000004110)	tdgf1 (ENSOMEG00000004126)	ENSOMEG00000004137	ENSOMEG00000004143	dcc (ENSOMEG00000004224)	ENSOMEG00000004281	mbd2 (ENSOMEG00000004312)	ENSOMEG00000004344	wdr91 (ENSOMEG00000004374)	ENSOMEG00000004394	june (ENSOMEG00000004398)	ENSOMEG00000004452	crata (ENSOMEG00000004481) #21	ptpa (ENSOMEG00000004504) #22	ier5l (ENSOMEG00000004513) #23	ntmt1 (ENSOMEG00000004532) #24	ndor1 (ENSOMEG00000004558)	lrsam1 (ENSOMEG00000004652)	lmo4a (ENSOMEG00000000106)	cdk9 (ENSOMEG00000004738)	fpgs (ENSOMEG00000004766)	naif1 (ENSOMEG00000004782)	eeig1b (ENSOMEG00000004807)	dpm2 (ENSOMEG00000004817)	psmb10 (ENSOMEG00000004851)	ENSOMEG00000004868	slc12a2 (ENSOMEG00000004964)
Javanese ricefish	MODERN SPECIES	3	ENSOJAG00000010211	ENSOJAG00000010247	ENSOJAG00000010417	ENSOJAG00000011654	dnajc25 (ENSOJAG00000011662)	tdgf1 (ENSOJAG00000011676)	dcc (ENSOJAG00000011803)	LYZ (ENSOJAG00000013841)	mbd2 (ENSOJAG00000013854)	ENSOJAG00000013870	wdr91 (ENSOJAG00000013925)	THAP1 (ENSOJAG00000014076)	june (ENSOJAG00000014082)	ENSOJAG00000014094	crata (ENSOJAG00000014126) #21	ptpa (ENSOJAG00000014551) #22	ier5l (ENSOJAG00000015196) #23	ENSOJAG00000015204	ntmt1 (ENSOJAG00000015254) #24	lrsam1 (ENSOJAG00000015473)	lmo4a (ENSOJAG00000015584)	cdk9 (ENSOJAG00000015604)	fpgs (ENSOJAG00000015630)	naif1 (ENSOJAG00000015783)	dpm2 (ENSOJAG00000015793)	psmb10 (ENSOJAG00000015797)	nit2 (ENSOJAG00000015837)	CENPA (ENSOJAG00000015975)	slc12a2 (ENSOJAG00000016174)	slc27a6 (ENSOJAG00000019294)	prrc1 (ENSOJAG00000019570)
Ovalentaria_B	ANCESTRAL SPECIES	14	ENSGT00390000013355	ENSGT01100000263483.A.g.b	ENSGT01100000263541.a.b.k	ENSGT00940000166301	ENSGT00940000158867	ENSGT00940000153832	ENSGT00950000183005.a.b	ENSGT00390000008823	ENSGT00940000155053.c.b	ENSGT00390000001566	ENSGT00410000029051	ENSGT00940000159383	ENSGT00940000165922	ENSGT00940000165259.a	ENSGT01060000248556.A.a.a.a.b.a.a #21	ENSGT00390000011500 #22	ENSGT00900000141021.b.a.d #23	ENSGT00390000008371.b #24	ENSGT00930000151050	ENSGT00930000151044	ENSGT00940000164907.b.b	ENSGT00940000155373	ENSGT00390000016526	ENSGT00450000040324.b.n	ENSGT00940000156811.b	ENSGT00390000001098	ENSGT00940000158633.a	ENSGT00940000177239	ENSGT00940000155841.c.b #18	ENSGT00530000063187.A #8	ENSGT00940000158674 #9
Pomacentridae	ANCESTRAL SPECIES	84							ENSGT00940000153832	ENSGT00950000183005.a.b	ENSGT00390000008823	ENSGT00940000155053.c.b	ENSGT00390000001566	ENSGT00940000159383	ENSGT00940000165922	ENSGT00940000165259.a	ENSGT01060000248556.A.a.a.a.b.a.a #21	ENSGT00390000011500 #22	ENSGT00900000141021.b.a.d #23	ENSGT00390000008371.b #24	ENSGT00950000183041.C	ENSGT00940000154856.B.c	ENSGT00940000161915.b	ENSGT00940000155657	ENSGT00410000025802	ENSGT00940000154704.c.c	ENSGT00390000005989.b.b	ENSGT00940000155860.b	ENSGT00940000154314.a	ENSGT00390000009948.d	ENSGT00940000155782	ENSGT00940000164226.a.b	ENSGT00390000011010.a.a
Pomacentridae_A	ANCESTRAL SPECIES	81							ENSGT00940000153832	ENSGT00950000183005.a.b	ENSGT00390000008823	ENSGT00940000155053.c.b	ENSGT00390000001566	ENSGT00940000159383	ENSGT00940000165922	ENSGT00940000165259.a	ENSGT01060000248556.A.a.a.a.b.a.a #21	ENSGT00390000011500 #22	ENSGT00900000141021.b.a.d #23	ENSGT00390000008371.b #24	ENSGT00950000183041.C	ENSGT00940000154856.B.c	ENSGT00940000161915.b	ENSGT00940000155657	ENSGT00410000025802	ENSGT00940000154704.c.c	ENSGT00390000005989.b.b	ENSGT00940000155860.b	ENSGT00940000154314.a	ENSGT00390000009948.d	ENSGT00940000155782	ENSGT00940000164226.a.b	ENSGT00390000011010.a.a.i
Amphiprion	ANCESTRAL SPECIES	176						ENSGT00940000153832	ENSGT00950000183005.a.b	ENSGT00390000008823	ENSGT00940000155053.c.b	ENSGT00390000001566	ENSGT00940000159383	ENSGT01090000260059.a.b.b.b.a.d.a.a.a.a.a.b	ENSGT00940000165922	ENSGT00940000165259.a	ENSGT01060000248556.A.a.a.a.b.a.a #21	ENSGT00390000011500 #22	ENSGT00900000141021.b.a.d #23	ENSGT00390000008371.b #24	ENSGT00950000183041.C	ENSGT00940000154856.B.c	ENSGT00940000161915.b	ENSGT00940000155657	ENSGT00410000025802	ENSGT00940000154704.c.c	ENSGT00390000005989.b.b	ENSGT00940000155860.b	ENSGT00940000154314.a	ENSGT00390000009948.d	ENSGT00940000155782	ENSGT00940000164226.a.b
Clown anemonefish	MODERN SPECIES	3658												ENSAOCG00000015589	june (ENSAOCG00000015597)	ENSAOCG00000015613	crata (ENSAOCG00000015672) #21	ptpa (ENSAOCG00000015719) #22	ier5l (ENSAOCG00000015729) #23
Orange clownfish	MODERN SPECIES	7	ENSAPEG00000021129	ENSAPEG00000021140	zgc:194202 (ENSAPEG00000021238)	dcc (ENSAPEG00000021303)	ENSAPEG00000021395	ENSAPEG00000021417	mbd2 (ENSAPEG00000021428)	ENSAPEG00000021457	ENSAPEG00000021473	wdr91 (ENSAPEG00000021493)	THAP1 (ENSAPEG00000021510)	ENSAPEG00000021525	june (ENSAPEG00000021547)	ENSAPEG00000021551	crata (ENSAPEG00000021588) #21	ptpa (ENSAPEG00000021629) #22	ier5l (ENSAPEG00000021646) #23	ntmt1 (ENSAPEG00000021658) #24	zcchc9 (ENSAPEG00000021681)	ENSAPEG00000021726	adra2b (ENSAPEG00000021739)	wdr45 (ENSAPEG00000021786)	ENSAPEG00000021813	ENSAPEG00000021838	stc1l (ENSAPEG00000022028)	FGFR1 (ENSAPEG00000022049)	kctd9b (ENSAPEG00000022149)	marchf5l (ENSAPEG00000022194)	actr1b (ENSAPEG00000022210)	npy8ar (ENSAPEG00000022245)	COX5B (ENSAPEG00000022259)
Spiny chromis	MODERN SPECIES	852															crata (ENSAPOG00000010782) #21	ptpa (ENSAPOG00000010709) #22	ier5l (ENSAPOG00000010671) #23	ntmt1 (ENSAPOG00000010651) #24	zcchc9 (ENSAPOG00000010630)	ENSAPOG00000010600	adra2b (ENSAPOG00000010578)	wdr45 (ENSAPOG00000010536)	ENSAPOG00000010485	ENSAPOG00000010470	ENSAPOG00000010453	stc1l (ENSAPOG00000010391)	FGFR1 (ENSAPOG00000010367)	kctd9b (ENSAPOG00000010277)	marchf5l (ENSAPOG00000010165)	actr1b (ENSAPOG00000010128)	npy8ar (ENSAPOG00000010064)
Bicolor damselfish	MODERN SPECIES	1713													june (ENSSPAG00000022912)	ENSSPAG00000022901	crata (ENSSPAG00000022897) #21	ptpa (ENSSPAG00000022892) #22	ier5l (ENSSPAG00000022890) #23	ntmt1 (ENSSPAG00000022886) #24	zcchc9 (ENSSPAG00000022883)	ENSSPAG00000022874	adra2b (ENSSPAG00000022864)	wdr45 (ENSSPAG00000022851)
Cichlidae	ANCESTRAL SPECIES	10	ENSGT01100000263541.a.b.k.h.b	ENSGT00940000166301	ENSGT00940000158867	ENSGT00940000153832.m	ENSGT00940000153832.l.a	ENSGT00940000153832.l.b	ENSGT00950000183005.a.b	ENSGT00390000008823	ENSGT00940000155053.c.b	ENSGT00390000001566	ENSGT00410000029051	ENSGT00940000159383	ENSGT00940000165922	ENSGT00940000165259.a	ENSGT01060000248556.A.a.a.a.b.a.a #21	ENSGT00390000011500 #22	ENSGT00900000141021.b.a.d #23	ENSGT00390000008371.b #24	ENSGT00930000151050	ENSGT00930000151044	ENSGT00940000164907.b.b	ENSGT00940000155373	ENSGT00390000016526	ENSGT00450000040324.b.n	ENSGT00940000156811.b	ENSGT00390000001098	ENSGT00940000158633.a	ENSGT00940000177239	ENSGT00940000155841.c.b #18	ENSGT00530000063187.A #8	ENSGT00940000158674 #9
Pseudocrenilabrinae	ANCESTRAL SPECIES		ENSGT01100000263541.a.b.k.h.a.b.d.a.b	ENSGT01100000263541.a.b.k.h.b	ENSGT00940000166301	ENSGT00940000158867	ENSGT00940000153832.l.a.a	ENSGT00940000153832.l.b	ENSGT00950000183005.a.b	ENSGT00390000008823	ENSGT00940000155053.c.b	ENSGT00390000001566	ENSGT00410000029051	ENSGT00940000159383	ENSGT00940000165922	ENSGT00940000165259.a	ENSGT01060000248556.A.a.a.a.b.a.a #21	ENSGT00390000011500 #22	ENSGT00900000141021.b.a.d #23	ENSGT00390000008371.b #24	ENSGT00930000151050	ENSGT00930000151044	ENSGT00940000164907.b.b	ENSGT00940000155373	ENSGT00390000016526.u	ENSGT00390000016526.v	ENSGT00450000040324.b.n	ENSGT00940000156811.b	ENSGT00390000001098	ENSGT00940000158633.a	ENSGT00940000177239	ENSGT00940000155841.c.b #18	ENSGT00530000063187.A #8
Pseudocrenilabrinae_A	ANCESTRAL SPECIES		ENSGT01100000263541.a.b.k.h.a.b.d.a.b	ENSGT01100000263541.a.b.k.h.b	ENSGT00940000166301	ENSGT00940000158867	ENSGT01070000255259	ENSGT00940000153832.l.a.a	ENSGT00940000153832.l.b	ENSGT00950000183005.a.b	ENSGT00390000008823	ENSGT00940000155053.c.b	ENSGT00390000001566	ENSGT00940000159383	ENSGT00940000165922	ENSGT00940000165259.a	ENSGT01060000248556.A.a.a.a.b.a.a #21	ENSGT00390000011500 #22	ENSGT00900000141021.b.a.d #23	ENSGT00390000008371.b #24	ENSGT00930000151050	ENSGT00930000151044	ENSGT00940000164907.b.b	ENSGT00940000155373	ENSGT00390000016526.u	ENSGT00390000016526.v	ENSGT00450000040324.b.n	ENSGT00940000156811.b	ENSGT00390000001098	ENSGT00940000158633.a	ENSGT00940000177239	ENSGT00940000155841.c.b #18	ENSGT00530000063187.A #8
Haplochromini	ANCESTRAL SPECIES		ENSGT01100000263541.a.b.k.h.a.b.d.a.b	ENSGT01100000263541.a.b.k.h.b	ENSGT00940000166301	ENSGT00940000158867	ENSGT01070000255259	ENSGT00940000153832.l.a.a	ENSGT00940000153832.l.b	ENSGT00950000183005.a.b	ENSGT00390000008823	ENSGT00940000155053.c.b	ENSGT00390000001566	ENSGT00940000159383	ENSGT00940000165922	ENSGT00940000165259.a	ENSGT01060000248556.A.a.a.a.b.a.a #21	ENSGT00390000011500 #22	ENSGT00900000141021.b.a.d #23	ENSGT00390000008371.b #24	ENSGT00930000151050	ENSGT00930000151044	ENSGT00940000164907.b.b	ENSGT00940000155373	ENSGT00390000016526.u	ENSGT00390000016526.v	ENSGT00450000040324.b.n	ENSGT00940000156811.b	ENSGT00390000001098	ENSGT00940000158633.a	ENSGT00940000177239	ENSGT00940000155841.c.b #18	ENSGT00530000063187.A #8
Burton s mouthbrooder	MODERN SPECIES	754															crata (ENSHBUG00000013537) #21	ptpa (ENSHBUG00000013456) #22	ier5l (ENSHBUG00000013436) #23	ntmt1 (ENSHBUG00000000896) #24	ndor1 (ENSHBUG00000013403)	lrsam1 (ENSHBUG00000013284)	lmo4a (ENSHBUG00000013261)	cdk9 (ENSHBUG00000013248)	fpgs (ENSHBUG00000013217)	fpgs (ENSHBUG00000013150)	naif1 (ENSHBUG00000013136)	eeig1b (ENSHBUG00000000381)	dpm2 (ENSHBUG00000013111)	PIP5KL1 (ENSHBUG00000013098)
Haplochromini_A	ANCESTRAL SPECIES	12	ENSGT01100000263541.a.b.k.h.a.b.d.a.b	ENSGT01100000263541.a.b.k.h.b	ENSGT00940000166301	ENSGT00940000158867	ENSGT01070000255259	ENSGT00940000153832.l.a.a	ENSGT00940000153832.l.b	ENSGT00950000183005.a.b	ENSGT00390000008823	ENSGT00940000155053.c.b	ENSGT00390000001566	ENSGT00940000159383	ENSGT00940000165922	ENSGT00940000165259.a	ENSGT01060000248556.A.a.a.a.b.a.a #21	ENSGT00390000011500 #22	ENSGT00900000141021.b.a.d #23	ENSGT00390000008371.b #24	ENSGT00930000151050	ENSGT00930000151044	ENSGT00940000164907.b.b	ENSGT00940000155373	ENSGT00390000016526.u	ENSGT00390000016526.v	ENSGT00450000040324.b.n	ENSGT00940000156811.b	ENSGT00390000001098	ENSGT00940000158633.a	ENSGT00940000177239	ENSGT00940000155841.c.b #18	ENSGT00530000063187.A #8
P. nyererei	MODERN SPECIES	510								LYZ (ENSPNYG00000003993)	ENSPNYG00000003876	mbd2 (ENSPNYG00000003862)	ENSPNYG00000003797	ENSPNYG00000003768	wdr91 (ENSPNYG00000003630)	june (ENSPNYG00000003606)	crata (ENSPNYG00000003559) #21	ptpa (ENSPNYG00000003541) #22	ier5l (ENSPNYG00000003521) #23	ntmt1 (ENSPNYG00000003502) #24	ndor1 (ENSPNYG00000003460)	lrsam1 (ENSPNYG00000003428)	lmo4a (ENSPNYG00000003413)	cdk9 (ENSPNYG00000003380)	fpgs (ENSPNYG00000003360)	fpgs (ENSPNYG00000003313)	naif1 (ENSPNYG00000003306)	eeig1b (ENSPNYG00000003268)	dpm2 (ENSPNYG00000003261)	PIP5KL1 (ENSPNYG00000003225)	sh3glb2b (ENSPNYG00000003195) #18	zer1 (ENSPNYG00000003143) #8	TBC1D13 (ENSPNYG00000003093) #9
Haplochromini_B	ANCESTRAL SPECIES	4	ENSGT01100000263483.F.a.t	ENSGT00940000166743	ENSGT01100000263538.A.b.g.a	ENSGT00940000166301	ENSGT00940000158867	ENSGT00940000153832.l.a.a	ENSGT00940000153832.l.b	ENSGT00950000183005.a.b	ENSGT00390000008823	ENSGT00940000155053.c.b	ENSGT00390000001566	ENSGT00940000159383	ENSGT00940000165922	ENSGT00940000165259.a	ENSGT01060000248556.A.a.a.a.b.a.a #21	ENSGT00390000011500 #22	ENSGT00900000141021.b.a.d #23	ENSGT00390000008371.b #24	ENSGT00930000151050	ENSGT00930000151044	ENSGT00940000164907.b.b	ENSGT00940000155373	ENSGT00390000016526.u	ENSGT00390000016526.v	ENSGT00450000040324.b.n	ENSGT00940000156811.b	ENSGT00390000001098	ENSGT00940000158633.a	ENSGT00940000177239	ENSGT00940000155841.c.b #18	ENSGT00530000063187.A #8
Zebra mbuna	MODERN SPECIES	1110	ENSMZEG00005014124	RAB27B (ENSMZEG00005014107)	ENSMZEG00005014081	TCF4 (ENSMZEG00005014060)	ENSMZEG00005001376	ENSMZEG00005001335	ENSMZEG00005001330	mbd2 (ENSMZEG00005001327)	ENSMZEG00005001314	ENSMZEG00005001285	wdr91 (ENSMZEG00005001192)	THAP1 (ENSMZEG00005001180)	june (ENSMZEG00005001171)	ENSMZEG00005001143	crata (ENSMZEG00005001100) #21	ptpa (ENSMZEG00005001052) #22	ier5l (ENSMZEG00005001033) #23	ntmt1 (ENSMZEG00005001015) #24	ndor1 (ENSMZEG00005000971)	lrsam1 (ENSMZEG00005000954)	lmo4a (ENSMZEG00005000933)	cdk9 (ENSMZEG00005000879)	fpgs (ENSMZEG00005000864)	fpgs (ENSMZEG00005000819)	naif1 (ENSMZEG00005000811)	eeig1b (ENSMZEG00005000759)	dpm2 (ENSMZEG00005000734)	PIP5KL1 (ENSMZEG00005000701)	ENSMZEG00005000684	ENSMZEG00005000666	SH3GLB2 (ENSMZEG00005000613) #18
Eastern happy	MODERN SPECIES	19	ENSACLG00000003298	tdgf1 (ENSACLG00000003303)	dcc (ENSACLG00000004257)	ENSACLG00000004411	ENSACLG00000004447	ENSACLG00000004471	ENSACLG00000004493	mbd2 (ENSACLG00000004512)	ENSACLG00000004553	ENSACLG00000004603	wdr91 (ENSACLG00000004633)	THAP1 (ENSACLG00000004851)	june (ENSACLG00000004863)	ENSACLG00000005116	crata (ENSACLG00000005135) #21	ptpa (ENSACLG00000005191) #22	ier5l (ENSACLG00000005228) #23	ntmt1 (ENSACLG00000005237) #24	ndor1 (ENSACLG00000005245)	lrsam1 (ENSACLG00000005258)	lmo4a (ENSACLG00000005292)	cdk9 (ENSACLG00000005309)	fpgs (ENSACLG00000005332)	fpgs (ENSACLG00000006033)	naif1 (ENSACLG00000006036)	eeig1b (ENSACLG00000006047)	dpm2 (ENSACLG00000006105)	PIP5KL1 (ENSACLG00000006121)	ENSACLG00000006152	ENSACLG00000006163	ENSACLG00000006179
Lyretail cichlid	MODERN SPECIES	293	zgc:113625 (ENSNBRG00000003585)	zgc:113625 (ENSNBRG00000003593)	tdgf1 (ENSNBRG00000003613)	dcc (ENSNBRG00000003627)	ENSNBRG00000003714	ENSNBRG00000003728	ENSNBRG00000003738	ENSNBRG00000003763	mbd2 (ENSNBRG00000003778)	ENSNBRG00000003802	ENSNBRG00000003844	wdr91 (ENSNBRG00000003866)	THAP1 (ENSNBRG00000003980)	june (ENSNBRG00000003993)	crata (ENSNBRG00000004003) #21	ptpa (ENSNBRG00000004046) #22	ier5l (ENSNBRG00000004082) #23	ntmt1 (ENSNBRG00000004094) #24	ndor1 (ENSNBRG00000004126)	lrsam1 (ENSNBRG00000004227)	lmo4a (ENSNBRG00000004243)	cdk9 (ENSNBRG00000004264)	ENSNBRG00000004289	fpgs (ENSNBRG00000004308)	naif1 (ENSNBRG00000004348)	eeig1b (ENSNBRG00000004359)	dpm2 (ENSNBRG00000004395)	PIP5KL1 (ENSNBRG00000004412)	ENSNBRG00000004435	sh3glb2b (ENSNBRG00000004469) #18	zer1 (ENSNBRG00000004749) #8
Nile tilapia	MODERN SPECIES	19	ENSONIG00000041705	ENSONIG00000029666	ENSONIG00000030659	ENSONIG00000028260	ENSONIG00000012636	mbd2 (ENSONIG00000012635)	ENSONIG00000012632	ENSONIG00000031827	wdr91 (ENSONIG00000012620)	ENSONIG00000031508	THAP1 (ENSONIG00000012619)	ENSONIG00000034332	june (ENSONIG00000021050)	ENSONIG00000012618	crata (ENSONIG00000012615) #21	ptpa (ENSONIG00000012613) #22	ier5l (ENSONIG00000032937) #23	ntmt1 (ENSONIG00000039468) #24	ndor1 (ENSONIG00000012608)	lrsam1 (ENSONIG00000012605)	lmo4a (ENSONIG00000040483)	cdk9 (ENSONIG00000012601)	fpgs (ENSONIG00000012592)	fpgs (ENSONIG00000029434)	naif1 (ENSONIG00000012590)	eeig1b (ENSONIG00000012588)	dpm2 (ENSONIG00000035554)	pip5kl1 (ENSONIG00000012586)	ENSONIG00000038791	ENSONIG00000027572	sh3glb2b (ENSONIG00000012581) #18
Midas cichlid	MODERN SPECIES	375	ENSACIG00000014655	ENSACIG00000014646	ENSACIG00000014634	ENSACIG00000014618	dcc (ENSACIG00000014551)	LYZ (ENSACIG00000014046)	ENSACIG00000013147	ENSACIG00000012613	mbd2 (ENSACIG00000012586)	ENSACIG00000012566	ENSACIG00000012549	wdr91 (ENSACIG00000012507)	THAP1 (ENSACIG00000012499)	june (ENSACIG00000012491)	crata (ENSACIG00000012461) #21	ptpa (ENSACIG00000012436) #22	ier5l (ENSACIG00000012426) #23	ntmt1 (ENSACIG00000012412) #24	ndor1 (ENSACIG00000012373)	fpgs (ENSACIG00000012228)	cdk9 (ENSACIG00000012171)	ENSACIG00000012158	lmo4a (ENSACIG00000012145)	lrsam1 (ENSACIG00000011986)	naif1 (ENSACIG00000011963)	eeig1b (ENSACIG00000011939)	dpm2 (ENSACIG00000011902)	PIP5KL1 (ENSACIG00000011884)
Percomorphaceae_C	ANCESTRAL SPECIES	17	ENSGT00390000013355	ENSGT01100000263483.A.g.b	ENSGT01100000263541.a.b.k	ENSGT00940000166301	ENSGT00940000158867	ENSGT00940000153832	ENSGT00950000183005.a.b	ENSGT00390000008823	ENSGT00940000155053.c.b	ENSGT00390000001566	ENSGT00410000029051	ENSGT00940000159383	ENSGT00940000165922	ENSGT00940000165259.a	ENSGT01060000248556.A.a.a.a.b.a.a #21	ENSGT00390000011500 #22	ENSGT00900000141021.b.a.d #23	ENSGT00390000008371.b #24	ENSGT00930000151050	ENSGT00930000151044	ENSGT00940000164907.b.b	ENSGT00940000155373	ENSGT00390000016526	ENSGT00390000007918	ENSGT00390000006320	ENSGT00940000155464.a.a	ENSGT00440000033609.w	ENSGT00940000156114.c	ENSGT00940000159579	ENSGT00940000158503	ENSGT00940000158674 #9
Eupercaria	ANCESTRAL SPECIES	13	ENSGT00390000013355	ENSGT01100000263483.A.g.b	ENSGT01100000263541.a.b.k	ENSGT00940000166301	ENSGT00940000158867	ENSGT00940000153832	ENSGT00950000183005.a.b	ENSGT00390000008823	ENSGT00940000155053.c.b	ENSGT00390000001566	ENSGT00410000029051	ENSGT00940000159383	ENSGT00940000165922	ENSGT00940000165259.a	ENSGT01060000248556.A.a.a.a.b.a.a #21	ENSGT00390000011500 #22	ENSGT00900000141021.b.a.d #23	ENSGT00390000008371.b #24	ENSGT00930000151050	ENSGT00930000151044	ENSGT00940000164907.b.b	ENSGT00940000155373	ENSGT00390000016526	ENSGT00390000007918	ENSGT00390000006320	ENSGT00940000155464.a.a	ENSGT00440000033609.w	ENSGT00940000156114.c	ENSGT00940000159579	ENSGT00940000158503	ENSGT00940000158674 #9
Tetraodontidae	ANCESTRAL SPECIES	177													ENSGT00390000001566	ENSGT00940000159383	ENSGT01060000248556.A.a.a.a.b.a.a #21	ENSGT00390000011500 #22	ENSGT00900000141021.b.a.d #23	ENSGT00390000008371.b #24	ENSGT00930000151050	ENSGT00930000151044
Fugu	MODERN SPECIES	18	ATP8B1 (ENSTRUG00000000117)	TCF4 (ENSTRUG00000002569)	ENSTRUG00000030649	RAB27B (ENSTRUG00000003528)	BRCC3 (ENSTRUG00000003833)	pum3 (ENSTRUG00000004074)	vldlr (ENSTRUG00000004731)	ENSTRUG00000005580	spp1 (ENSTRUG00000005889)	ENSTRUG00000029564	htr1a-B (ENSTRUG00000005939)	ENSTRUG00000006045	wdr91 (ENSTRUG00000006084)	THAP1 (ENSTRUG00000023030)	crata (ENSTRUG00000030328) #21	ptpa (ENSTRUG00000007171) #22	ier5l (ENSTRUG00000007279) #23	ntmt1 (ENSTRUG00000007291) #24	ENSTRUG00000031347	ndor1 (ENSTRUG00000007332)	lrsam1 (ENSTRUG00000000726)	ddx21 (ENSTRUG00000017570)
Tetraodon	MODERN SPECIES	26	CNOT2 (ENSTNIG00000002496)	KCNMB4 (ENSTNIG00000002497)	ptprb (ENSTNIG00000002498)	PTPRR (ENSTNIG00000002499)	ENSTNIG00000002500	rab21 (ENSTNIG00000002501)	cand1 (ENSTNIG00000006486)	ENSTNIG00000006485	ENSTNIG00000006484	ENSTNIG00000001329	ENSTNIG00000006482	ECHDC3 (ENSTNIG00000001958)	kcnj8 (ENSTNIG00000006480)	abcc9 (ENSTNIG00000006479)	crata (ENSTNIG00000007207) #21	ptpa (ENSTNIG00000007208) #22	ier5l (ENSTNIG00000007209) #23	ntmt1 (ENSTNIG00000007210) #24	ndor1 (ENSTNIG00000007211)	lrsam1 (ENSTNIG00000007212)	ENSTNIG00000007213	spp1 (ENSTNIG00000000575)	ENSTNIG00000007214	vldlr (ENSTNIG00000010322)	cables1 (ENSTNIG00000010323)	KCNV2 (ENSTNIG00000010324)	pum3 (ENSTNIG00000010325)	ENSTNIG00000010326	BRCC3 (ENSTNIG00000010327)	RAB27B (ENSTNIG00000010328)	ENSTNIG00000010329
Eupecaria_A	ANCESTRAL SPECIES	14	ENSGT00390000013355	ENSGT01100000263483.A.g.b	ENSGT01100000263541.a.b.k	ENSGT00940000166301	ENSGT00940000158867	ENSGT00940000153832	ENSGT00950000183005.a.b	ENSGT00390000008823	ENSGT00940000155053.c.b	ENSGT00390000001566	ENSGT00410000029051	ENSGT00940000159383	ENSGT00940000165922	ENSGT00940000165259.a	ENSGT01060000248556.A.a.a.a.b.a.a #21	ENSGT00390000011500 #22	ENSGT00900000141021.b.a.d #23	ENSGT00390000008371.b #24	ENSGT00930000151050	ENSGT00930000151044	ENSGT00940000164907.b.b	ENSGT00940000155373	ENSGT00390000016526	ENSGT00390000007918	ENSGT00390000006320	ENSGT00940000155464.a.a	ENSGT00440000033609.w	ENSGT00940000156114.c	ENSGT00940000159579	ENSGT00940000158503	ENSGT00940000158674 #9
Eupecaria_B	ANCESTRAL SPECIES	14	ENSGT00390000013355	ENSGT01100000263483.A.g.b	ENSGT01100000263541.a.b.k	ENSGT00940000166301	ENSGT00940000158867	ENSGT00940000153832	ENSGT00950000183005.a.b	ENSGT00390000008823	ENSGT00940000155053.c.b	ENSGT00390000001566	ENSGT00410000029051	ENSGT00940000159383	ENSGT00940000165922	ENSGT00940000165259.a	ENSGT01060000248556.A.a.a.a.b.a.a #21	ENSGT00390000011500 #22	ENSGT00900000141021.b.a.d #23	ENSGT00390000008371.b #24	ENSGT00930000151050	ENSGT00930000151044	ENSGT00940000164907.b.b	ENSGT00940000155373	ENSGT00390000016526	ENSGT00390000007918	ENSGT00390000006320	ENSGT00940000155464.a.a	ENSGT00440000033609.w	ENSGT00940000156114.c	ENSGT00940000159579	ENSGT00940000158503	ENSGT00940000158674 #9
Eupecaria_C	ANCESTRAL SPECIES	9	ENSGT00950000182925.B.b	ENSGT00390000013355	ENSGT01100000263483.A.g.b	ENSGT01100000263541.a.b.k	ENSGT00940000166301	ENSGT00940000158867	ENSGT00940000153832	ENSGT00950000183005.a.b	ENSGT00390000008823	ENSGT00940000155053.c.b	ENSGT00390000001566	ENSGT00940000159383	ENSGT00940000165922	ENSGT00940000165259.a	ENSGT01060000248556.A.a.a.a.b.a.a #21	ENSGT00390000011500 #22	ENSGT00900000141021.b.a.d #23	ENSGT00390000008371.b #24	ENSGT00930000151050	ENSGT00930000151044	ENSGT00940000164907.b.b	ENSGT00940000155373	ENSGT00390000016526	ENSGT00390000007918	ENSGT00390000006320	ENSGT00940000155464.a.a	ENSGT00440000033609.w	ENSGT00940000156114.c	ENSGT00940000159579	ENSGT00940000158503	ENSGT00940000158674 #9
Eupercaria_incertae_sedis	ANCESTRAL SPECIES	6	ENSGT00950000182925.B.b	ENSGT00390000013355	ENSGT01100000263483.A.g.b	ENSGT01100000263541.a.b.k	ENSGT00940000166301	ENSGT00940000158867	ENSGT00940000153832	ENSGT00950000183005.a.b	ENSGT00390000008823	ENSGT00940000155053.c.b	ENSGT00390000001566	ENSGT00940000159383	ENSGT00940000165922	ENSGT00940000165259.a	ENSGT01060000248556.A.a.a.a.b.a.a #21	ENSGT00390000011500 #22	ENSGT00900000141021.b.a.d #23	ENSGT00390000008371.b #24	ENSGT00930000151050	ENSGT00930000151044	ENSGT00940000164907.b.b	ENSGT00940000155373	ENSGT00390000016526	ENSGT00390000007918	ENSGT00390000006320	ENSGT00940000155464.a.a	ENSGT00440000033609.w	ENSGT00940000156114.c	ENSGT00940000159579	ENSGT00940000158503	ENSGT00940000158674 #9
European seabass	MODERN SPECIES	9	ENSDLAG00005030896	ENSDLAG00005026384	ENSDLAG00005006270	ENSDLAG00005027509	ENSDLAG00005006417	ENSDLAG00005009427	ENSDLAG00005009436	ENSDLAG00005009443	ENSDLAG00005009449	ENSDLAG00005009483	ENSDLAG00005009496	ENSDLAG00005031673	ENSDLAG00005031835	ENSDLAG00005010160	crata (ENSDLAG00005010222) #21	ptpa (ENSDLAG00005011041) #22	ier5l (ENSDLAG00005011922) #23	ntmt1 (ENSDLAG00005035033) #24	ndor1 (ENSDLAG00005011955)	ENSDLAG00005012016	ENSDLAG00005034406	ENSDLAG00005012294	ENSDLAG00005012340	SKP2 (ENSDLAG00005013313)	ENSDLAG00005029405	SLC1A3 (ENSDLAG00005013579)	ENSDLAG00005028733	ENSDLAG00005013882	ENSDLAG00005013885	ENSDLAG00005014014	ENSDLAG00005014084
Large yellow croaker	MODERN SPECIES	3	htr1ab (ENSLCRG00005001533)	ENSLCRG00005001546	dcc (ENSLCRG00005001753)	ENSLCRG00005003435	ENSLCRG00005003438	ENSLCRG00005003439	ENSLCRG00005003440	ENSLCRG00005003441	ENSLCRG00005003443	wdr91 (ENSLCRG00005003447)	THAP1 (ENSLCRG00005003486)	june (ENSLCRG00005003487)	ENSLCRG00005003488	ENSLCRG00005003490	crata (ENSLCRG00005003501) #21	ptpa (ENSLCRG00005004313) #22	ier5l (ENSLCRG00005004434) #23	ntmt1 (ENSLCRG00005004436) #24	ndor1 (ENSLCRG00005004441)	lrsam1 (ENSLCRG00005004452)	lmo4a (ENSLCRG00005004463)	cdk9 (ENSLCRG00005004464)	fpgs (ENSLCRG00005004481)	ENSLCRG00005005559	skp2 (ENSLCRG00005005561)	nadk2 (ENSLCRG00005005568)	slc1a3b (ENSLCRG00005005653)	spra (ENSLCRG00005006399)	smyd1a (ENSLCRG00005006401)	DQX1 (ENSLCRG00005006442)	thnsl2 (ENSLCRG00005006447)
Gilthead seabream	MODERN SPECIES	3	ENSSAUG00010009860	ENSSAUG00010009861	ENSSAUG00010009865	LGALS1 (ENSSAUG00010009869)	ENSSAUG00010009876	mbd2 (ENSSAUG00010009881)	ENSSAUG00010009882	ENSSAUG00010009885	wdr91 (ENSSAUG00010009889)	THAP1 (ENSSAUG00010009899)	ENSSAUG00010009901	ENSSAUG00010009904	ENSSAUG00010009907	ENSSAUG00010009908	crata (ENSSAUG00010009922) #21	ptpa (ENSSAUG00010010601) #22	ier5l (ENSSAUG00010010696) #23	ntmt1 (ENSSAUG00010010697) #24	ENSSAUG00010010698	ENSSAUG00010010700	ENSSAUG00010010718	ENSSAUG00010011707	ENSSAUG00010011710	dnajc25 (ENSSAUG00010011712)	lmnb1 (ENSSAUG00010011729)	MARCHF3 (ENSSAUG00010011955)	prrc1 (ENSSAUG00010011958)	SLC27A3 (ENSSAUG00010011964)	psmb10 (ENSSAUG00010011974)	selenoh (ENSSAUG00010012000)	YTHDC2 (ENSSAUG00010012018)
Perciformes	ANCESTRAL SPECIES	32	ENSGT00940000156579	ENSGT00940000157873	ENSGT00940000156510.h	ENSGT00940000157326	ENSGT00390000005646	ENSGT00950000183162.b	ENSGT00940000155603.A.a.a.a	ENSGT01030000234542.b.b.a.a.a.a	ENSGT00940000157006	ENSGT00390000006096.a.b	ENSGT00940000155826	ENSGT00390000018878	ENSGT01100000263514.B	ENSGT00940000161047	ENSGT01060000248556.A.a.a.a.b.a.a #21	ENSGT00390000011500 #22	ENSGT00900000141021.b.a.d #23	ENSGT00390000008371.b #24	ENSGT00930000151050	ENSGT00930000151044	ENSGT00940000164907.b.b	ENSGT00940000155373	ENSGT00390000016526.n	ENSGT00390000007918	ENSGT00390000006320	ENSGT00940000155464.a.a	ENSGT00440000033609.w	ENSGT00940000156114.c	ENSGT00940000159579	ENSGT00940000158503	ENSGT00940000158674 #9
Cottioidei	ANCESTRAL SPECIES	31	ENSGT00940000156579	ENSGT00940000157873	ENSGT00940000156510.h	ENSGT00940000157326	ENSGT00390000005646	ENSGT00950000183162.b	ENSGT00940000155603.A.a.a.a	ENSGT01030000234542.b.b.a.a.a.a	ENSGT00940000157006	ENSGT00390000006096.a.b	ENSGT00940000155826	ENSGT00390000018878	ENSGT01100000263514.B	ENSGT00940000161047	ENSGT01060000248556.A.a.a.a.b.a.a #21	ENSGT00390000011500 #22	ENSGT00900000141021.b.a.d #23	ENSGT00390000008371.b #24	ENSGT00930000151050	ENSGT00930000151044	ENSGT00940000164907.b.b	ENSGT00940000155373	ENSGT00390000016526.n	ENSGT00390000007918	ENSGT00390000006320	ENSGT00940000155464.a.a	ENSGT00440000033609.w	ENSGT00940000156114.c	ENSGT00940000159579	ENSGT00940000158503	ENSGT00940000158674 #9
Lumpfish	MODERN SPECIES	3	chd1 (ENSCLMG00005021912)	reep5 (ENSCLMG00005021909)	ENSCLMG00005021908	ENSCLMG00005021906	slc38a9 (ENSCLMG00005021733)	PURG (ENSCLMG00005021708)	ENSCLMG00005021686	tpm2 (ENSCLMG00005021661)	tln1 (ENSCLMG00005021513)	hmgcs1 (ENSCLMG00005021505)	YTHDC2 (ENSCLMG00005021223)	dcp2 (ENSCLMG00005021220)	selenoh (ENSCLMG00005021219)	psmb10 (ENSCLMG00005021200)	crata (ENSCLMG00005020796) #21	ptpa (ENSCLMG00005020704) #22	ier5l (ENSCLMG00005020699) #23	ntmt1 (ENSCLMG00005020697) #24	ENSCLMG00005020695	ndor1 (ENSCLMG00005020688)	lrsam1 (ENSCLMG00005020684)	lmo4a (ENSCLMG00005020679)	ccni (ENSCLMG00005020674)	ccng2 (ENSCLMG00005020672)	ENSCLMG00005020669	WDR7 (ENSCLMG00005018918)	st8sia3 (ENSCLMG00005018909)	ONECUT2 (ENSCLMG00005018908)	fech (ENSCLMG00005018869)	NARS1 (ENSCLMG00005018686)	txnl1 (ENSCLMG00005018678)
Stickleback	MODERN SPECIES	13	chd1 (ENSGACG00000018644)	reep5 (ENSGACG00000018641)	TSHR (ENSGACG00000018635)	nrg1 (ENSGACG00000018632)	slc38a9 (ENSGACG00000018624)	ENSGACG00000018619	ENSGACG00000018599	tln1 (ENSGACG00000018584)	hmgcs1 (ENSGACG00000018575)	ENSGACG00000018573	YTHDC2 (ENSGACG00000018569)	dcp2 (ENSGACG00000018562)	selenoh (ENSGACG00000018561)	psmb10 (ENSGACG00000018551)	crata (ENSGACG00000018549) #21	ptpa (ENSGACG00000018538) #22	ENSGACG00000018537	ier5l (ENSGACG00000018536) #23	ntmt1 (ENSGACG00000018531) #24	ndor1 (ENSGACG00000018526)	lrsam1 (ENSGACG00000018522)	lmo4a (ENSGACG00000018520)	cdk9 (ENSGACG00000018517)	fpgs (ENSGACG00000018515)	skp2 (ENSGACG00000018512)	nadk2 (ENSGACG00000018510)	slc1a3b (ENSGACG00000018505)	spra (ENSGACG00000018502)	ENSGACG00000018499	DQX1 (ENSGACG00000018495)	thnsl2 (ENSGACG00000018492)
Perciformes_a	ANCESTRAL SPECIES	12	ENSGT00950000182925.B.b	ENSGT00390000013355	ENSGT00940000166301	ENSGT00940000158867	ENSGT00940000153832	ENSGT00950000183005.a.b	ENSGT00390000008823	ENSGT00940000155053.c.b	ENSGT00390000001566	ENSGT00940000159383	ENSGT00940000165922	ENSGT00940000165259.a	ENSGT01100000263514.B	ENSGT00940000161047	ENSGT01060000248556.A.a.a.a.b.a.a #21	ENSGT00390000011500 #22	ENSGT00390000008371.b #24	ENSGT00930000151050	ENSGT00930000151044	ENSGT00940000164907.b.b	ENSGT00940000155373	ENSGT00390000016526.n	ENSGT00390000007918	ENSGT00390000006320	ENSGT00940000155464.a.a	ENSGT00440000033609.w	ENSGT00940000156114.c	ENSGT00940000159579	ENSGT00940000158503	ENSGT00940000158674 #9	ENSGT00530000063187.A #8
Pike perch	MODERN SPECIES	72	tln1 (ENSSLUG00000016731)	psmb10 (ENSSLUG00000017834)	hmgcs1 (ENSSLUG00000017857)	YTHDC2 (ENSSLUG00000018065)	dcp2 (ENSSLUG00000018195)	tdgf1 (ENSSLUG00000018203)	dcc (ENSSLUG00000018221)	ENSSLUG00000018311	mbd2 (ENSSLUG00000018319)	ENSSLUG00000018322	ENSSLUG00000018327	cmlc1 (ENSSLUG00000018335)	wdr91 (ENSSLUG00000018356)	THAP1 (ENSSLUG00000018388)	crata (ENSSLUG00000018451) #21	ptpa (ENSSLUG00000020164) #22	ntmt1 (ENSSLUG00000020286) #24	ndor1 (ENSSLUG00000020299)	ephx2 (ENSSLUG00000020321)	lrsam1 (ENSSLUG00000020347)	lmo4a (ENSSLUG00000020373)	cdk9 (ENSSLUG00000020382)	fpgs (ENSSLUG00000020407)	skp2 (ENSSLUG00000020494)	nadk2 (ENSSLUG00000020541)	slc1a3b (ENSSLUG00000020645)	spra (ENSSLUG00000020673)	smyd1a (ENSSLUG00000020688)	DQX1 (ENSSLUG00000020733)	thnsl2 (ENSSLUG00000020748)	TBC1D13 (ENSSLUG00000020760) #9
Ballan wrasse	MODERN SPECIES	140	ENSLBEG00000022225	tdgf1 (ENSLBEG00000022212)	ENSLBEG00000022184	dcc (ENSLBEG00000022104)	LYZ (ENSLBEG00000022045)	LYZ (ENSLBEG00000022005)	mbd2 (ENSLBEG00000021918)	ENSLBEG00000021847	ENSLBEG00000021803	wdr91 (ENSLBEG00000021696)	THAP1 (ENSLBEG00000021675)	june (ENSLBEG00000021660)	ENSLBEG00000021654	ENSLBEG00000021603	crata (ENSLBEG00000021525) #21	ptpa (ENSLBEG00000021472) #22	ier5l (ENSLBEG00000021453) #23	ntmt1 (ENSLBEG00000021434) #24	ENSLBEG00000021410	ndor1 (ENSLBEG00000021358)	lrsam1 (ENSLBEG00000021288)	lmo4a (ENSLBEG00000021265)	cdk9 (ENSLBEG00000021233)	fpgs (ENSLBEG00000021120)	fpgs (ENSLBEG00000021069)	skp2 (ENSLBEG00000020985)	nadk2 (ENSLBEG00000020935)	slc1a3b (ENSLBEG00000020724)	SPR (ENSLBEG00000020615)	spra (ENSLBEG00000020590)	smyd1a (ENSLBEG00000020550)
Percomorphaceae_D	ANCESTRAL SPECIES	15	ENSGT00950000182925.B.b	ENSGT00390000013355	ENSGT01100000263483.A.g.b	ENSGT01100000263541.a.b.k	ENSGT00940000166301	ENSGT00940000158867	ENSGT00940000153832	ENSGT00950000183005.a.b	ENSGT00940000170723	ENSGT00940000155053.c.b	ENSGT00390000001566	ENSGT00940000159383	ENSGT00940000165922	ENSGT00940000165259.a	ENSGT01060000248556.A.a.a.a.b.a.a #21	ENSGT00390000011500 #22	ENSGT00900000141021.b.a.d #23	ENSGT00390000008371.b #24	ENSGT00930000151050	ENSGT00930000151044	ENSGT00940000164907.b.b	ENSGT00940000155373	ENSGT00390000016526	ENSGT00940000161047	ENSGT01100000263514.B	ENSGT00390000018878	ENSGT00940000155826	ENSGT00390000006096.a.b	ENSGT00940000157006	ENSGT01030000234542.b.b.a.a.a.a	ENSGT00940000155603.A.a.a.a
Anabantaria	ANCESTRAL SPECIES	12	ENSGT00940000168229	ENSGT00950000182925.B.b	ENSGT00390000013355	ENSGT00940000166301	ENSGT00940000158867	ENSGT00940000153832	ENSGT00950000183005.a.b	ENSGT00390000008823	ENSGT00940000170723	ENSGT00940000155053.c.b	ENSGT00390000001566	ENSGT00940000159383	ENSGT00940000165922	ENSGT00940000165259.a	ENSGT01060000248556.A.a.a.a.b.a.a #21	ENSGT00390000011500 #22	ENSGT00900000141021.b.a.d #23	ENSGT00390000008371.b #24	ENSGT00930000151050	ENSGT00930000151044	ENSGT00940000164907.b.b	ENSGT00940000155373	ENSGT00390000016526	ENSGT00940000161047	ENSGT01100000263514.B	ENSGT00390000018878	ENSGT00940000155826	ENSGT00390000006096.a.b	ENSGT00940000157006	ENSGT01030000234542.b.b.a.a.a.a	ENSGT00940000155603.A.a.a.a
Anabantoidei	ANCESTRAL SPECIES	16	ENSGT00940000156081.j	ENSGT00940000168229	ENSGT00950000182925.B.b	ENSGT00390000013355	ENSGT00940000166301	ENSGT00940000158867	ENSGT00940000153832.q.b	ENSGT00950000183005.a.b	ENSGT00390000008823	ENSGT00940000155053.c.b	ENSGT00390000001566	ENSGT00940000159383	ENSGT00940000165922	ENSGT00940000165259.a	ENSGT01060000248556.A.a.a.a.b.a.a #21	ENSGT00390000011500 #22	ENSGT00900000141021.b.a.d #23	ENSGT00390000008371.b #24	ENSGT00930000151050	ENSGT00930000151044	ENSGT00940000164907.b.b	ENSGT00940000155373	ENSGT00390000016526	ENSGT00940000154079.b	ENSGT00940000155946.c.b	ENSGT00930000151016	ENSGT00940000155152.e	ENSGT00940000156261	ENSGT00940000159990	ENSGT00940000157419	ENSGT00940000153391.c.b.a.j.b
Climbing perch	MODERN SPECIES	13	ENSATEG00000006966	ENSATEG00000007099	ENSATEG00000007118	ENSATEG00000007146	ENSATEG00000007209	ENSATEG00000007333	ENSATEG00000007353	ENSATEG00000007384	ENSATEG00000007390	ENSATEG00000007407	ENSATEG00000007412	ENSATEG00000007422	ENSATEG00000027749	ENSATEG00000007448	crata (ENSATEG00000007460) #21	ptpa (ENSATEG00000007512) #22	ier5l (ENSATEG00000007529) #23	ntmt1 (ENSATEG00000027633) #24	ndor1 (ENSATEG00000007563)	ENSATEG00000007582	ENSATEG00000007592	ENSATEG00000007603	ENSATEG00000007615	ENSATEG00000007646	ENSATEG00000007664	ENSATEG00000007750	ENSATEG00000007783	ENSATEG00000007815	DENND1A (ENSATEG00000007883)	NEK6 (ENSATEG00000007927)	psmb7 (ENSATEG00000007952)
Siamese fighting fish	MODERN SPECIES	3	ENSBSLG00000013089	ENSBSLG00000013163	dnajc25 (ENSBSLG00000013211)	tdgf1 (ENSBSLG00000013270)	dcc (ENSBSLG00000013484)	ENSBSLG00000015000	ENSBSLG00000015009	mbd2 (ENSBSLG00000015165)	ENSBSLG00000015225	ENSBSLG00000015334	wdr91 (ENSBSLG00000015360)	THAP1 (ENSBSLG00000015443)	june (ENSBSLG00000015470)	ENSBSLG00000015475	crata (ENSBSLG00000015528) #21	ptpa (ENSBSLG00000016037) #22	ier5l (ENSBSLG00000016084) #23	ndor1 (ENSBSLG00000016095)	ntmt1 (ENSBSLG00000016150) #24	lrsam1 (ENSBSLG00000016179)	ENSBSLG00000016346	cdk9 (ENSBSLG00000016348)	fpgs (ENSBSLG00000002339)	ralgps1 (ENSBSLG00000002736)	ENSBSLG00000003100	fbxw2 (ENSBSLG00000003103)	ENSBSLG00000003591	ENSBSLG00000003653	DENND1A (ENSBSLG00000003940)	NEK6 (ENSBSLG00000004787)	psmb7 (ENSBSLG00000004898)
Zig-zag eel	MODERN SPECIES	3	ENSMAMG00000018409	ENSMAMG00000028269	ENSMAMG00000026284	ENSMAMG00000028237	ENSMAMG00000018694	ENSMAMG00000026448	ENSMAMG00000018776	ENSMAMG00000018791	ENSMAMG00000018813	ENSMAMG00000018820	ENSMAMG00000018833	ENSMAMG00000018864	ENSMAMG00000018872	ENSMAMG00000018881	crata (ENSMAMG00000018889) #21	ptpa (ENSMAMG00000018951) #22	ntmt1 (ENSMAMG00000025652) #24	ndor1 (ENSMAMG00000019018)	ENSMAMG00000019051	ENSMAMG00000027368	ENSMAMG00000019076	ENSMAMG00000019094	ENSMAMG00000019127	ENSMAMG00000019146	ENSMAMG00000019154	ENSMAMG00000019169	ENSMAMG00000019193	hmgcs1 (ENSMAMG00000019246)	ENSMAMG00000019858	tpm2 (ENSMAMG00000020182)	ENSMAMG00000022593
Carangaria	ANCESTRAL SPECIES	17	ENSGT00950000182925.B.b	ENSGT00390000013355	ENSGT01100000263483.A.g.b	ENSGT01100000263541.a.b.k	ENSGT00940000166301	ENSGT00940000158867	ENSGT00940000153832	ENSGT00950000183005.a.b	ENSGT00940000170723	ENSGT00940000155053.c.b	ENSGT00390000001566	ENSGT00940000159383	ENSGT00940000165922	ENSGT00940000165259.a	ENSGT01060000248556.A.a.a.a.b.a.a #21	ENSGT00390000011500 #22	ENSGT00900000141021.b.a.d #23	ENSGT00390000008371.b #24	ENSGT00930000151050	ENSGT00940000161047	ENSGT01100000263514.B	ENSGT00390000018878	ENSGT00940000155826	ENSGT00390000006096.a.b	ENSGT00940000157006	ENSGT01030000234542.b.b.a.a.a.a	ENSGT00940000155603.A.a.a.a	ENSGT00950000183162.b	ENSGT00390000005646	ENSGT00940000157326	ENSGT00940000156510.h
Carangaria_A	ANCESTRAL SPECIES	43						ENSGT00940000158867	ENSGT00940000153832	ENSGT00950000183005.a.b	ENSGT00940000170723	ENSGT00940000155053.c.b	ENSGT00390000001566	ENSGT00940000159383	ENSGT00940000165922	ENSGT00940000165259.a	ENSGT01060000248556.A.a.a.a.b.a.a #21	ENSGT00390000011500 #22	ENSGT00900000141021.b.a.d #23	ENSGT00390000008371.b #24	ENSGT00930000151050	ENSGT00940000161047	ENSGT01100000263514.B	ENSGT00390000018878	ENSGT00940000155826	ENSGT00390000006096.a.b	ENSGT00940000157006	ENSGT01030000234542.b.b.a.a.a.a	ENSGT00940000155603.A.a.a.a	ENSGT00950000183162.b	ENSGT00390000005646	ENSGT00940000157326	ENSGT00940000156510.h
Seriola	ANCESTRAL SPECIES	33						ENSGT00940000158867	ENSGT00940000153832	ENSGT00950000183005.a.b	ENSGT00940000170723	ENSGT00940000155053.c.b	ENSGT00390000001566	ENSGT00940000159383	ENSGT00940000165922	ENSGT00940000165259.a	ENSGT01060000248556.A.a.a.a.b.a.a #21	ENSGT00390000011500 #22	ENSGT00900000141021.b.a.d #23	ENSGT00390000008371.b #24	ENSGT00930000151050	ENSGT00940000157703	ENSGT00550000074872	ENSGT00940000153947.A	ENSGT00940000160540	ENSGT00940000157484	ENSGT00940000156579	ENSGT00940000159053	ENSGT00940000157873	ENSGT00940000155373	ENSGT00930000151044	ENSGT00390000016526	ENSGT00940000161073
Greater amberjack	MODERN SPECIES	34			ENSSDUG00000017580	dcc (ENSSDUG00000017594)	LYZ (ENSSDUG00000017661)	mbd2 (ENSSDUG00000017686)	ENSSDUG00000017702	ENSSDUG00000017713	ENSSDUG00000017750	wdr91 (ENSSDUG00000017780)	THAP1 (ENSSDUG00000017891)	june (ENSSDUG00000017897)	ENSSDUG00000017902	ENSSDUG00000017920	crata (ENSSDUG00000017943) #21	ptpa (ENSSDUG00000017976) #22	ier5l (ENSSDUG00000018004) #23	ntmt1 (ENSSDUG00000018008) #24	ndor1 (ENSSDUG00000018034)	megf10 (ENSSDUG00000018089)	sptlc1 (ENSSDUG00000018182)	SPTLC1 (ENSSDUG00000018250)	ROR2 (ENSSDUG00000018268)	nfil3 (ENSSDUG00000018281)	auh (ENSSDUG00000018285)	chd1 (ENSSDUG00000018314)	syk (ENSSDUG00000018454)	reep5 (ENSSDUG00000018646)	cdk9 (ENSSDUG00000018668)	lrsam1 (ENSSDUG00000018693)	fpgs (ENSSDUG00000018783)
Yellowtail amberjack	MODERN SPECIES	3288			APOB (ENSSLDG00000016232)	dcc (ENSSLDG00000016393)	trnt1 (ENSSLDG00000016463)	ENSSLDG00000016554	LYZ (ENSSLDG00000016569)	mbd2 (ENSSLDG00000016580)	ENSSLDG00000016601	ENSSLDG00000016619	wdr91 (ENSSLDG00000016654)	THAP1 (ENSSLDG00000016757)	june (ENSSLDG00000016774)	ENSSLDG00000016785	crata (ENSSLDG00000016827) #21	ptpa (ENSSLDG00000016869) #22	ier5l (ENSSLDG00000016892) #23	ntmt1 (ENSSLDG00000016905) #24	ENSSLDG00000016925	ndor1 (ENSSLDG00000016940)	megf10 (ENSSLDG00000017014)	sptlc1 (ENSSLDG00000017078)	ROR2 (ENSSLDG00000017159)	nfil3 (ENSSLDG00000017192)	auh (ENSSLDG00000017201)	chd1 (ENSSLDG00000017244)	syk (ENSSLDG00000017375)	reep5 (ENSSLDG00000017457)	cdk9 (ENSSLDG00000017475)	lrsam1 (ENSSLDG00000017500)	fpgs (ENSSLDG00000017557)
Barramundi perch	MODERN SPECIES	246							dcc (ENSLCAG00010021045)	LYZ (ENSLCAG00010021191)	mbd2 (ENSLCAG00010021195)	ENSLCAG00010021197	ENSLCAG00010021201	wdr91 (ENSLCAG00010021207)	THAP1 (ENSLCAG00010021220)	june (ENSLCAG00010021222)	crata (ENSLCAG00010021259) #21	ptpa (ENSLCAG00010021393) #22	ier5l (ENSLCAG00010021397) #23	ntmt1 (ENSLCAG00010021399) #24	ndor1 (ENSLCAG00010021424)	psmb10 (ENSLCAG00010021491)	selenoh (ENSLCAG00010021495)	dcp2 (ENSLCAG00010021498)	YTHDC2 (ENSLCAG00010021517)	hmgcs1 (ENSLCAG00010021564)	tln1 (ENSLCAG00010021685)	tpm2 (ENSLCAG00010022385)	ENSLCAG00010022557	slc38a9 (ENSLCAG00010022602)	NRG1 (ENSLCAG00010022713)
Pleuronectoidei	ANCESTRAL SPECIES	7	ENSGT00950000182925.B.b	ENSGT00390000013355	ENSGT01100000263483.A.g.b	ENSGT01100000263541.a.b.k	ENSGT00940000166301	ENSGT00940000158867	ENSGT00940000153832	ENSGT00950000183005.a.b	ENSGT00940000170723	ENSGT00940000155053.c.b	ENSGT00390000001566	ENSGT00940000159383	ENSGT00940000165922	ENSGT00940000165259.a	ENSGT01060000248556.A.a.a.a.b.a.a #21	ENSGT00390000011500 #22	ENSGT00900000141021.b.a.d #23	ENSGT00390000008371.b #24	ENSGT00930000151050	ENSGT00940000161047	ENSGT01100000263514.B	ENSGT00390000018878	ENSGT00940000155826	ENSGT00390000006096.a.b	ENSGT00940000157006	ENSGT01030000234542.b.b.a.a.a.a	ENSGT00940000155603.A.a.a.a	ENSGT00950000183162.b	ENSGT00390000005646	ENSGT00940000157326	ENSGT00940000156510.h
Turbot	MODERN SPECIES	7	ENSSMAG00000011913	ENSSMAG00000011884	ENSSMAG00000011877	ENSSMAG00000022354	ENSSMAG00000011857	ENSSMAG00000011785	ENSSMAG00000024350	ENSSMAG00000011764	ENSSMAG00000011744	ENSSMAG00000011734	ENSSMAG00000011666	ENSSMAG00000026696	ENSSMAG00000011650	ENSSMAG00000011576	crata (ENSSMAG00000011545) #21	ptpa (ENSSMAG00000011508) #22	ier5l (ENSSMAG00000011494) #23	ntmt1 (ENSSMAG00000011481) #24	ndor1 (ENSSMAG00000011418)	ENSSMAG00000011330	ENSSMAG00000031133	ENSSMAG00000011363	ENSSMAG00000011407	ENSSMAG00000036103	ENSSMAG00000034821	ENSSMAG00000011304	ENSSMAG00000019232	ENSSMAG00000011284	ENSSMAG00000011225	ENSSMAG00000011205	ENSSMAG00000010964
Tongue sole	MODERN SPECIES	5	PIP5KL1 (ENSCSEG00000018827)	SH3GLB2 (ENSCSEG00000018823) #18	zer1 (ENSCSEG00000018807) #8	TBC1D13 (ENSCSEG00000018804) #9	thnsl2 (ENSCSEG00000018800)	nrg1 (ENSCSEG00000018793)	slc38a9 (ENSCSEG00000018757)	PURG (ENSCSEG00000018750)	ENSCSEG00000018702	ENSCSEG00000018690	tln1 (ENSCSEG00000018640)	THAP1 (ENSCSEG00000018118)	june (ENSCSEG00000018115)	ENSCSEG00000018101	crata (ENSCSEG00000018060) #21	ptpa (ENSCSEG00000018006) #22	ier5l (ENSCSEG00000017996) #23	ntmt1 (ENSCSEG00000017989) #24	ndor1 (ENSCSEG00000017975)	psmb10 (ENSCSEG00000017959)	YTHDC2 (ENSCSEG00000017911)	hmgcs1 (ENSCSEG00000017895)	wdr91 (ENSCSEG00000017864)	ENSCSEG00000017856	ENSCSEG00000017847	dusp11 (ENSCSEG00000017836)	ATP6V1B2 (ENSCSEG00000017810)	dmtn (ENSCSEG00000017799)	pbdc1 (ENSCSEG00000017787)	xpo7 (ENSCSEG00000017746)	GFRA2 (ENSCSEG00000017738)
Tiger tail seahorse	MODERN SPECIES	414													ENSHCOG00000002296	ENSHCOG00000002314	crata (ENSHCOG00000002332) #21	ptpa (ENSHCOG00000002362) #22	ier5l (ENSHCOG00000000743) #23	ntmt1 (ENSHCOG00000002379) #24	ndor1 (ENSHCOG00000002397)	lrsam1 (ENSHCOG00000002467)	ENSHCOG00000002484	cdk9 (ENSHCOG00000002494)	fpgs (ENSHCOG00000002500)	skp2 (ENSHCOG00000002516)	nadk2 (ENSHCOG00000002523)	slc1a3b (ENSHCOG00000002533)	SPR (ENSHCOG00000002537)	ENSHCOG00000002545	ENSHCOG00000002550	DQX1 (ENSHCOG00000002562)	thnsl2 (ENSHCOG00000002586)
Pinecone sodierfish	MODERN SPECIES	3	psmb7 (ENSMMDG00005009472)	NEK6 (ENSMMDG00005009066)	ENSMMDG00005009060	ENSMMDG00005009057	ENSMMDG00005009053	fbxw2 (ENSMMDG00005009051)	angptl2a (ENSMMDG00005008993)	ralgps1 (ENSMMDG00005006729)	zbtb43 (ENSMMDG00005006700)	lmx1ba (ENSMMDG00005006698)	mvb12ba (ENSMMDG00005006693)	MAPKAP1 (ENSMMDG00005006687)	ENSMMDG00005006683	AJM1 (ENSMMDG00005006679)	crata (ENSMMDG00005003884) #21	ptpa (ENSMMDG00005003748) #22	ier5l (ENSMMDG00005003728) #23	ntmt1 (ENSMMDG00005003721) #24	ndor1 (ENSMMDG00005003596)	lrsam1 (ENSMMDG00005003533)	lmo4a (ENSMMDG00005003518)	cdk9 (ENSMMDG00005003506)	fpgs (ENSMMDG00005001587)	skp2 (ENSMMDG00005001483)	nadk2 (ENSMMDG00005001427)	slc1a3b (ENSMMDG00005001407)	spra (ENSMMDG00005001403)	smyd1a (ENSMMDG00005001394)	DQX1 (ENSMMDG00005001377)	thnsl2 (ENSMMDG00005001365)	TBC1D13 (ENSMMDG00005001336) #9
Cod	MODERN SPECIES	17	ENSGMOG00000034517	ENSGMOG00000014307	ENSGMOG00000014321	ENSGMOG00000014376	ENSGMOG00000033435	srsf9 (ENSGMOG00000007980)	ENSGMOG00000023628	ENSGMOG00000007991	ENSGMOG00000037116	ENSGMOG00000033207	lmx1ba (ENSGMOG00000008005)	ENSGMOG00000011501	MAPKAP1 (ENSGMOG00000011512)	ENSGMOG00000028462	crata (ENSGMOG00000003957) #21	ptpa (ENSGMOG00000003931) #22	ier5l (ENSGMOG00000026752) #23	ntmt1 (ENSGMOG00000006905) #24	ndor1 (ENSGMOG00000006885)	ENSGMOG00000006861	ENSGMOG00000022601	ENSGMOG00000009048	ENSGMOG00000034408	ENSGMOG00000025508	ENSGMOG00000026131	ENSGMOG00000025987	ENSGMOG00000035806	ENSGMOG00000027524	ENSGMOG00000029740	ENSGMOG00000009024	SKP2 (ENSGMOG00000009001)
Protacanthopterygii	ANCESTRAL SPECIES	17	ENSGT00390000014940	ENSGT00940000157703	ENSGT00390000003837	ENSGT00940000154412.A	ENSGT01030000234582.f.b.b.b	ENSGT00940000155742.a.a	ENSGT00930000151016	ENSGT00940000153391.c.b.a.j.b	ENSGT00940000157419	ENSGT00940000159990	ENSGT00940000158540	ENSGT00940000156261	ENSGT00950000183101.a.b.b.a.b	ENSGT00940000155373	ENSGT01060000248556.A.a.a.a.b.a #21	ENSGT00390000011500 #22	ENSGT00900000141021.b.a.d #23	ENSGT00390000008371.b #24	ENSGT00930000151050	ENSGT00530000064286	ENSGT00940000155151.a.a.a	ENSGT00940000164907.b.a	ENSGT01090000260003.a.b.b.a.a.a.a	ENSGT00940000154394.a.e.b	ENSGT00940000165492.b	ENSGT00930000151044	ENSGT00390000006922	ENSGT00940000164386	ENSGT00940000155151.a.a.b	ENSGT00940000164907.b.b	ENSGT00940000154394.b.a.a.b.b
Salmoninae	DUPLICATION
Salmoninae	ANCESTRAL SPECIES	134	ENSGT00390000003837	ENSGT00940000154412.A	ENSGT01030000234582.f.b.b.b	ENSGT00940000155742.a.a.c	ENSGT00930000151016.cb	ENSGT00940000157936.l	ENSGT00940000153391.c.b.a.j.b	ENSGT00940000157419.x	ENSGT00940000159990	ENSGT00940000158540.y.a	ENSGT00940000156261.db.a	ENSGT00950000183101.a.b.b.a.b	ENSGT00940000160615.a.b	ENSGT00940000155373	ENSGT01060000248556.A.a.a.a.b.a #21	ENSGT00390000011500.k #22	ENSGT00900000141021.b.a.d.e #23	ENSGT00390000008371.b #24	ENSGT00930000151050	ENSGT00530000064286.d	ENSGT00930000151044	ENSGT00390000006922	ENSGT00940000164386	ENSGT00940000155151.a.a.b	ENSGT00940000164907.b.b.d.a	ENSGT00940000154394.b.a.a.b.b	ENSGT00940000165492.a.a	ENSGT00390000004692.d.a.n	ENSGT00980000199397.a	ENSGT00940000154394.b.a.b.q	ENSGT00940000155151.a.a.a.d
Huchen	DUPLICATION
Huchen	MODERN SPECIES	1419											ENSHHUG00000046945	ENSHHUG00000046939	cdk9 (ENSHHUG00000046901)	crata (ENSHHUG00000046558) #21	ier5l (ENSHHUG00000046550) #23	ptpa (ENSHHUG00000046471) #22
Huchen	MODERN SPECIES	222													ENSHHUG00000030785	DENND1A (ENSHHUG00000030793)	ENSHHUG00000030815	ENSHHUG00000030817 #22	ier5l (ENSHHUG00000030819) #23	ENSHHUG00000030821	ccn1l1 (ENSHHUG00000030825)	lmo4a (ENSHHUG00000030835)	arpc5lb (ENSHHUG00000030847)	ppp6c (ENSHHUG00000030893)	ENSHHUG00000030902
Salmoninae_a	ANCESTRAL SPECIES	7	ENSGT00940000154412.A	ENSGT00940000155742.a.a.c	ENSGT00930000151016.cb	ENSGT01030000234576.D.a.b.a.a.a.a.b.a	ENSGT01100000263520.a.a.a.a.b.a.c.b.a.a	ENSGT00940000157936.l	ENSGT00940000153391.c.b.a.j.b	ENSGT00940000157419.x	ENSGT00940000159990	ENSGT00940000158540.y.a	ENSGT00940000156261.db.a	ENSGT00950000183101.a.b.b.a.b	ENSGT00940000160615.a.b	ENSGT00940000155373	ENSGT01060000248556.A.a.a.a.b.a #21	ENSGT00390000011500.k #22	ENSGT00900000141021.b.a.d.e #23	ENSGT00390000008371.b #24	ENSGT00930000151050	ENSGT00530000064286.d	ENSGT00930000151044	ENSGT00390000006922	ENSGT00940000164386	ENSGT00940000155151.a.a.b	ENSGT00940000164907.b.b.d.a	ENSGT00940000154394.b.a.a.b.b	ENSGT00940000154394.b.a.b.q	ENSGT00940000155151.a.a.a.d	ENSGT00940000164907.b.a.c	ENSGT00620000089226	ENSGT00940000154394.b.a.a.a.a.a.b
Salmo	ANCESTRAL SPECIES		ENSGT00950000182890.A.b	ENSGT01100000263541.b.a	ENSGT01100000263483.F.a.cb	ENSGT01100000263541.b.b	ENSGT01100000263520.a.a.a.a.b.a.c.b.a.a	ENSGT00940000157936.l	ENSGT00940000153391.c.b.a.j.b	ENSGT00940000157419.x	ENSGT00940000159990	ENSGT00940000158540.y.a	ENSGT00940000156261.db.a	ENSGT00940000160615.a.b	ENSGT00940000155373	ENSGT00940000167707	ENSGT01060000248556.A.a.a.a.b.a #21	ENSGT00390000011500.k #22	ENSGT00900000141021.b.a.d.e #23	ENSGT00390000008371.b #24	ENSGT00930000151050	ENSGT00530000064286.d	ENSGT00930000151044	ENSGT00390000006922	ENSGT00940000164386	ENSGT00940000155151.a.a.b	ENSGT00940000164907.b.b.d.a	ENSGT00940000154394.b.a.a.b.b	ENSGT00390000020276.lb	ENSGT00390000016526	ENSGT00940000160451 #32	ENSGT00390000016384.l.a	ENSGT00940000158501.d.a.c
River trout	MODERN SPECIES	15	fbxw2 (ENSSTUG00000017698)	ENSSTUG00000017675	ENSSTUG00000017670	ENSSTUG00000017610	ENSSTUG00000017589	NR6A1 (ENSSTUG00000017537)	nr5a1b (ENSSTUG00000017519)	psmb7 (ENSSTUG00000017461)	NEK6 (ENSSTUG00000017275)	LHX2 (ENSSTUG00000017212)	DENND1A (ENSSTUG00000017039)	ENSSTUG00000016961	cdk9 (ENSSTUG00000016931)	ENSSTUG00000016927	crata (ENSSTUG00000014589) #21	ptpa (ENSSTUG00000013797) #22	ier5l (ENSSTUG00000013752) #23	ntmt1 (ENSSTUG00000013744) #24	ndor1 (ENSSTUG00000013700)	ENSSTUG00000013659	lrsam1 (ENSSTUG00000013165)	ENSSTUG00000013137	rpl12 (ENSSTUG00000013074)	pole3 (ENSSTUG00000013038)	ccn1l1 (ENSSTUG00000013028)	ENSSTUG00000013026	lmo4a (ENSSTUG00000013015)	ENSSTUG00000012998	ENSSTUG00000012981	ENSSTUG00000012952	ENSSTUG00000012902
Atlantic salmon	MODERN SPECIES		ENSSSAG00000116833	ENSSSAG00000071124	ENSSSAG00000108484	ENSSSAG00000071104	NR6A1 (ENSSSAG00000071040)	nr5a1b (ENSSSAG00000088370)	psmb7 (ENSSSAG00000070917)	ENSSSAG00000117314	NEK6 (ENSSSAG00000111428)	LHX2 (ENSSSAG00000069676)	crb2a (ENSSSAG00000070752)	DENND1A (ENSSSAG00000070774)	cdk9 (ENSSSAG00000070738)	ENSSSAG00000070732	crata (ENSSSAG00000067447) #21	ptpa (ENSSSAG00000066908) #22	IER5 (ENSSSAG00000066882) #23	ntmt1 (ENSSSAG00000066881) #24	ndor1 (ENSSSAG00000066849)	ENSSSAG00000066833	rpl12 (ENSSSAG00000066776)	lrsam1 (ENSSSAG00000066808)	pole3 (ENSSSAG00000066768)	ccn1l1 (ENSSSAG00000116908)	lmo4a (ENSSSAG00000066759)	zgc:55461 (ENSSSAG00000101622)	ENSSSAG00000066731	ENSSSAG00000066321	ENSSSAG00000066294 #32	ncs1a (ENSSSAG00000066286)	ENSSSAG00000094965
Oncorhynchus	ANCESTRAL SPECIES	19	ENSGT00940000155742.a.a.c	ENSGT00930000151016.cb	ENSGT01030000234576.D.a.b.a.a.a.a.b.a	ENSGT00950000182890.A.b	ENSGT01100000263541.b	ENSGT01100000263520.a.a.a.a.b.a.c.b.a.a	ENSGT00940000157936.l	ENSGT00940000153391.c.b.a.j.b	ENSGT00940000157419.x	ENSGT00940000159990.d	ENSGT00940000158540.y.a	ENSGT00940000156261.db.a	ENSGT00950000183101.a.b.b.a.b	ENSGT00940000155373	ENSGT01060000248556.A.a.a.a.b.a #21	ENSGT00390000011500.k #22	ENSGT00900000141021.b.a.d.e #23	ENSGT00390000008371.b #24	ENSGT00930000151050	ENSGT00530000064286.d	ENSGT00930000151044	ENSGT00390000006922	ENSGT00940000164386	ENSGT00940000155151.a.a.b	ENSGT00940000164907.b.b.d.a	ENSGT00940000165492.a.a	ENSGT00390000016526	ENSGT00940000160451 #32	ENSGT00940000167171	ENSGT00390000016384.l.a	ENSGT00940000158501.d.a.c
Oncorhynchus_a	ANCESTRAL SPECIES	12	ENSGT00940000154412.A	ENSGT00940000155742.a.a.c	ENSGT00930000151016.cb	ENSGT00950000182890.A.b	ENSGT01100000263541.b	ENSGT01100000263520.a.a.a.a.b.a.c.b.a.a	ENSGT00940000157936.l	ENSGT00940000153391.c.b.a.j.b	ENSGT00940000157419.x	ENSGT00940000159990.d	ENSGT00940000158540.y.a	ENSGT00940000156261.db.a	ENSGT00950000183101.a.b.b.a.b	ENSGT00940000155373	ENSGT01060000248556.A.a.a.a.b.a #21	ENSGT00390000011500.k #22	ENSGT00900000141021.b.a.d.e #23	ENSGT00390000008371.b #24	ENSGT00930000151050	ENSGT00530000064286.d	ENSGT00930000151044	ENSGT00390000006922	ENSGT00940000164386	ENSGT00940000155151.a.a.b	ENSGT00940000164907.b.b.d.a	ENSGT00940000165492.a.a	ENSGT00390000016526	ENSGT00940000160451 #32	ENSGT00940000167171	ENSGT00390000016384.l.a	ENSGT00940000158501.d.a.c
Chinook salmon	MODERN SPECIES	12	ENSOTSG00005047312	ENSOTSG00005047314	ENSOTSG00005047318	WDR7 (ENSOTSG00005047319)	ATP8B1 (ENSOTSG00005047320)	ccng2 (ENSOTSG00005047322)	ENSOTSG00005047323	NR6A1 (ENSOTSG00005047324)	nr5a1b (ENSOTSG00005047326)	psmb7 (ENSOTSG00005047328)	NEK6 (ENSOTSG00005047329)	LHX2 (ENSOTSG00005047331)	DENND1A (ENSOTSG00005047332)	CRB2 (ENSOTSG00005047456)	crata (ENSOTSG00005047465) #21	ptpa (ENSOTSG00005047657) #22	ier5l (ENSOTSG00005047663) #23	ntmt1 (ENSOTSG00005047665) #24	ndor1 (ENSOTSG00005047666)	ENSOTSG00005047669	lrsam1 (ENSOTSG00005047670)	rpl12 (ENSOTSG00005047672)	pole3 (ENSOTSG00005047680)	ENSOTSG00005047681	ccn1l1 (ENSOTSG00005047682)	lmo4a (ENSOTSG00005047683)	ENSOTSG00005047684	TUBB4B (ENSOTSG00005047686)	ENSOTSG00005047687	fpgs (ENSOTSG00005047697)	gpr107 (ENSOTSG00005047719) #32
Coho salmon	MODERN SPECIES	15	FBXW2 (ENSOKIG00005040186)	ENSOKIG00005040151	ENSOKIG00005040124	ENSOKIG00005040079	ENSOKIG00005040060	NR6A1 (ENSOKIG00005039873)	nr5a1b (ENSOKIG00005039853)	psmb7 (ENSOKIG00005039801)	NEK6 (ENSOKIG00005039628)	LHX2 (ENSOKIG00005039581)	DENND1A (ENSOKIG00005038947)	ENSOKIG00005038911	crb2a (ENSOKIG00005038790)	cdk9 (ENSOKIG00005038769)	crata (ENSOKIG00005036280) #21	ptpa (ENSOKIG00005037321) #22	ier5l (ENSOKIG00005037286) #23	ntmt1 (ENSOKIG00005037263) #24	ndor1 (ENSOKIG00005037020)	ENSOKIG00005036987	lrsam1 (ENSOKIG00005036797)	rpl12 (ENSOKIG00005036665)	pole3 (ENSOKIG00005036619)	ccn1l1 (ENSOKIG00005036602)	lmo4a (ENSOKIG00005036570)	ENSOKIG00005036524	ENSOKIG00005036469	fpgs (ENSOKIG00005035313)	gpr107 (ENSOKIG00005035007) #32	ENSOKIG00005034963	ENSOKIG00005034941
Rainbow trout	MODERN SPECIES	26	ENSOMYG00000060988	ENSOMYG00000051087	ENSOMYG00000069683	ENSOMYG00000041702	NR6A1 (ENSOMYG00000041734)	nr5a1b (ENSOMYG00000041759)	psmb7 (ENSOMYG00000041766)	NEK6 (ENSOMYG00000041782)	ENSOMYG00000075449	LHX2 (ENSOMYG00000041798)	DENND1A (ENSOMYG00000041827)	ENSOMYG00000072052	crb2a (ENSOMYG00000042025)	ENSOMYG00000042044	crata (ENSOMYG00000042148) #21	ptpa (ENSOMYG00000042435) #22	ENSOMYG00000060240	ier5l (ENSOMYG00000042486) #23	ENSOMYG00000060356	ntmt1 (ENSOMYG00000042491) #24	ndor1 (ENSOMYG00000042500)	ENSOMYG00000042517	lrsam1 (ENSOMYG00000042530)	rpl12 (ENSOMYG00000042549)	pole3 (ENSOMYG00000042572)	ccn1l1 (ENSOMYG00000042576)	lmo4a (ENSOMYG00000042581)	ENSOMYG00000042585	ENSOMYG00000042589	ENSOMYG00000042662	ENSOMYG00000042954 #32
Salmoninae	ANCESTRAL SPECIES	1566																ENSGT00390000011500.l #22	ENSGT00900000141021.b.a.d.f #23
Salmoninae_a	ANCESTRAL SPECIES	80	ENSGT00940000161102.g	ENSGT00950000182943.o	ENSGT00950000183162.a.b.j.b	ENSGT00940000167350.e	ENSGT00940000156921.h	ENSGT00390000011179.h	ENSGT00940000158444.j	ENSGT00940000158973.a.b.c.a	ENSGT00950000183125.b.a.a.a.a.a.e	ENSGT01030000234539.b.b.a.i.m.b	ENSGT00940000165894.b.d	ENSGT00930000151016.bb	ENSGT00940000155742.a.a.d	ENSGT00940000159154.j	ENSGT00940000155603.A.a.a.a.a	ENSGT00390000011500.l #22	ENSGT00900000141021.b.a.d.f #23	ENSGT00940000164907.b.b.d.b	ENSGT00940000158501.d.a.d	ENSGT00390000009566.h	ENSGT00550000074961.b.c	ENSGT00940000163205.d	ENSGT00530000063187.A.g #8	ENSGT00940000158674.g #9	ENSGT00940000153181.m.b	ENSGT00440000038585.c.d	ENSGT00940000156340.a.d.d	ENSGT00940000161345.d	ENSGT00940000153877.a.a.b.c	ENSGT00940000156662.d.h.b	ENSGT00530000063497.a.a.c
Oncorhynchus	ANCESTRAL SPECIES	85												ENSGT00930000151016.bb	ENSGT00940000155742.a.a.d	ENSGT00940000159154.j	ENSGT00940000155603.A.a.a.a.a	ENSGT00390000011500.l #22	ENSGT00900000141021.b.a.d.f #23	ENSGT00940000164907.b.b.d.b	ENSGT00940000158501.d.a.d	ENSGT00390000009566.h	ENSGT00550000074961.b.c	ENSGT00940000163205.d	ENSGT00530000063187.A.g #8	ENSGT00940000158674.g #9	ENSGT00940000153181.m.b	ENSGT00440000038585.c.d	ENSGT00940000156340.a.d.d	ENSGT00940000153877.a.a.b.c	ENSGT00940000156662.d.h.b	ENSGT00530000063497.a.a.c	ENSGT00940000166931.e.a
Oncorhynchus_a	ANCESTRAL SPECIES	47					ENSGT00930000151016.bb	ENSGT00940000155742.a.a.d	ENSGT00940000159154.j	ENSGT00940000155603.A.a.a.a.a	ENSGT00950000183162.b.f	ENSGT00550000074618.a.b.f	ENSGT00940000155674.oc.b	ENSGT00940000160616.y	ENSGT00940000157419.w.a	ENSGT00940000158540.y.b	ENSGT00940000156261.eb	ENSGT00390000011500.l #22	ENSGT00900000141021.b.a.d.f #23	ENSGT00940000164907.b.b.d.b	ENSGT00940000158501.d.a.d	ENSGT00390000009566.h	ENSGT00550000074961.b.c	ENSGT00940000163205.d	ENSGT00530000063187.A.g #8	ENSGT00940000158674.g.b #9	ENSGT00940000153181.m.b	ENSGT00940000158674.g.a #9	ENSGT00940000156340.a.d.d	ENSGT00940000153877.a.a.b.c	ENSGT00940000156662.d.h.b	ENSGT00530000063497.a.a.c	ENSGT00940000166931.e.a
Chinook salmon	DUPLICATION
Chinook salmon	MODERN SPECIES	2885									nrg1 (ENSOTSG00005021656)	PURG (ENSOTSG00005021654)	ENSOTSG00005021648	zbtb43 (ENSOTSG00005021647)	psmb7 (ENSOTSG00005021644)	LHX2 (ENSOTSG00005021642)	ENSOTSG00005021641	ptpa (ENSOTSG00005021635) #22	ier5l (ENSOTSG00005021632) #23	ENSOTSG00005021630	stat1b (ENSOTSG00005019214)
Chinook salmon	MODERN SPECIES	2964								nrg1 (ENSOTSG00005033391)	PURG (ENSOTSG00005033393)	ENSOTSG00005033395	ENSOTSG00005033399	zbtb43 (ENSOTSG00005033400)	psmb7 (ENSOTSG00005033401)	LHX2 (ENSOTSG00005033404)	ENSOTSG00005033405	ptpa (ENSOTSG00005033406) #22	ier5l (ENSOTSG00005033407) #23
Rainbow trout	MODERN SPECIES	364	ENSOMYG00000043842	ENSOMYG00000069402	ENSOMYG00000043827	ENSOMYG00000067926	PURG (ENSOMYG00000043818)	ENSOMYG00000043814	ENSOMYG00000043800	ENSOMYG00000062655	ENSOMYG00000043808	ENSOMYG00000043783	ENSOMYG00000050320	ENSOMYG00000071827	ENSOMYG00000051789	ENSOMYG00000047870	ENSOMYG00000043770	ENSOMYG00000043766 #22	ENSOMYG00000068897	ENSOMYG00000043762	ENSOMYG00000043761 #23	ENSOMYG00000075376	ENSOMYG00000053398	ENSOMYG00000043738	arpc5lb (ENSOMYG00000043729)	SCAI (ENSOMYG00000074293)	SCAI (ENSOMYG00000043725)	ppp6c (ENSOMYG00000043715)	ENSOMYG00000043706	ENSOMYG00000070113	ENSOMYG00000043666 #8	ENSOMYG00000043143 #9	ENSOMYG00000043609
Salmo	ANCESTRAL SPECIES																	ENSGT00390000011500.l #22
Atlantic salmon	MODERN SPECIES	2	ppiab (ENSSSAG00000006931)	ENSSSAG00000114426	ENSSSAG00000112659	ENSSSAG00000004840	ENSSSAG00000004379	ENSSSAG00000096678	ENSSSAG00000004269	ENSSSAG00000004245	ENSSSAG00000004200	ENSSSAG00000004178	ENSSSAG00000086537	ENSSSAG00000102591	ENSSSAG00000098254	ENSSSAG00000094554	ENSSSAG00000071115	ENSSSAG00000071098 #22	ENSSSAG00000089403	ENSSSAG00000088101	ENSSSAG00000081878	ENSSSAG00000071079	ARP5L (ENSSSAG00000039245)	SCAI (ENSSSAG00000119979)	ppp6c (ENSSSAG00000040088)	ENSSSAG00000083596	ENSSSAG00000040133	ENSSSAG00000106260	ENSSSAG00000040195 #8	ENSSSAG00000041629 #9	ENSSSAG00000120691	ENSSSAG00000041813	ENSSSAG00000042291
Northern pike	MODERN SPECIES	13	slc12a2 (ENSELUG00000018889)	fbxw2 (ENSELUG00000018951)	ENSELUG00000018960	ENSELUG00000018970	ENSELUG00000019008	ENSELUG00000029906	NR6A1 (ENSELUG00000019147)	nr5a1b (ENSELUG00000019192)	psmb7 (ENSELUG00000019284)	NEK6 (ENSELUG00000019344)	LHX2 (ENSELUG00000019408)	DENND1A (ENSELUG00000000844)	CRB2 (ENSELUG00000019522)	cdk9 (ENSELUG00000019692)	crata (ENSELUG00000019745) #21	ptpa (ENSELUG00000000869) #22	ier5l (ENSELUG00000019814) #23	ENSELUG00000034166	ntmt1 (ENSELUG00000019833) #24	lrsam1 (ENSELUG00000019893)	rpl12 (ENSELUG00000019938)	pole3 (ENSELUG00000001285)	ccn1l1 (ENSELUG00000019976)	lmo4a (ENSELUG00000019991)	TUBB4B (ENSELUG00000020007)	ENSELUG00000030475	ENSELUG00000024741	ENSELUG00000020184	ENSELUG00000027081	fpgs (ENSELUG00000020278)	gpr107 (ENSELUG00000020299) #32
Osteoglossiformes	ANCESTRAL SPECIES	75													ENSGT00930000151016	ENSGT01060000248556.A.a.a.a.b.b #21	ENSGT00940000158379	ENSGT00390000011500 #22	ENSGT00900000141021.b.a.c.a #23	ENSGT00390000006784 #25	ENSGT00530000064286.a	ENSGT00940000155151.a.a.b	ENSGT00940000164907.b.a	ENSGT01090000260003.a.b.b.a.a.a.a	ENSGT00940000154394.a	ENSGT00940000154394.b.a.a.a.b.b	ENSGT00940000165492.a.a	ENSGT00390000016526.h	ENSGT00950000183101.a.b.b.a.a.l	ENSGT00940000153391.c.b.a.h	ENSGT00940000157936	ENSGT00940000157194.f	ENSGT00390000016384
P. kingsleyae	MODERN SPECIES	36	MVB12B (ENSPKIG00000024721)	LMX1B (ENSPKIG00000024701)	ZBTB43 (ENSPKIG00000024691)	zbtb34 (ENSPKIG00000024688)	ENSPKIG00000024679	ralgps1 (ENSPKIG00000024643)	si:dkey-56i24.1 (ENSPKIG00000024619)	fbxw2 (ENSPKIG00000024600)	ENSPKIG00000024575	ENSPKIG00000024565	ENSPKIG00000024549	ENSPKIG00000024542	ENSPKIG00000024531	zgc:154046 (ENSPKIG00000024502) #21	ADAMTS13 (ENSPKIG00000024467)	ptpa (ENSPKIG00000024438) #22	IER5L (ENSPKIG00000024424) #23	asb6 (ENSPKIG00000024415) #25	FKBP15 (ENSPKIG00000024375)	ccn1l1 (ENSPKIG00000024360)	ENSPKIG00000024343	bcl2l16 (ENSPKIG00000024322)	tubb2b (ENSPKIG00000024313)	ENSPKIG00000024304	ENSPKIG00000024292	FPGS (ENSPKIG00000024268)	CRB2 (ENSPKIG00000024247)	ENSPKIG00000024237	lhx2b (ENSPKIG00000024197)	ENSPKIG00000024188	NEK6 (ENSPKIG00000024170)
Asian bonytongue	MODERN SPECIES	8	gapvd1 (ENSSFOG00015017245)	ENSSFOG00015017194	LMX1B (ENSSFOG00015017159)	ZBTB43 (ENSSFOG00015017154)	zbtb34 (ENSSFOG00015017147)	ralgps1 (ENSSFOG00015017038)	ENSSFOG00015017133	ENSSFOG00015017015	ENSSFOG00015033301	ENSSFOG00015017012	fbxw2 (ENSSFOG00015016968)	ENSSFOG00015003976	NCS1 (ENSSFOG00015016804)	CRAT (ENSSFOG00015016764) #21	ENSSFOG00015016722	ptpa (ENSSFOG00015016682) #22	IER5L (ENSSFOG00015030523) #23	asb6 (ENSSFOG00015016641) #25	FKBP15 (ENSSFOG00015016577)	rpl12 (ENSSFOG00015031530)	ENSSFOG00015016467	ENSSFOG00015016442	bcl2l16 (ENSSFOG00015016433)	ENSSFOG00015011323	ENSSFOG00015016374	FPGS (ENSSFOG00015016349)	CRB2 (ENSSFOG00015016231)	lhx2b (ENSSFOG00015008780)	NEK6 (ENSSFOG00015032992)	NR5A1 (ENSSFOG00015008707)	nr6a1a (ENSSFOG00015008672)
Spotted gar	MODERN SPECIES	660	clic3 (ENSLOCG00000001932)	paxx (ENSLOCG00000001950)	dph7 (ENSLOCG00000001966)	mrpl41 (ENSLOCG00000017334)	PNPLA7 (ENSLOCG00000001986)	nsmfb (ENSLOCG00000002067)	ENSLOCG00000017335	ENSLOCG00000017336	ENSLOCG00000002080	fbxw2 (ENSLOCG00000002095)	ENSLOCG00000002108	ENSLOCG00000002137	ENSLOCG00000002154 #32	ADAMTS13 (ENSLOCG00000002168)	crata (ENSLOCG00000002196) #21	ptpa (ENSLOCG00000002220) #22	ier5l (ENSLOCG00000017337) #23	ntmt1 (ENSLOCG00000002241) #24	asb6 (ENSLOCG00000002248) #25	ndor1 (ENSLOCG00000002261)	slc2a8 (ENSLOCG00000002280)	lcn15 (ENSLOCG00000002295)	ambp (ENSLOCG00000002312)	nrarpa (ENSLOCG00000017338)	EXD3 (ENSLOCG00000002330)	wdr31 (ENSLOCG00000002358)	ENSLOCG00000002366	tor4aa (ENSLOCG00000017339) ##28	ENSLOCG00000002383	ENSLOCG00000002409	ENSLOCG00000002421
Reedfish	MODERN SPECIES	17	uck1 (ENSECRG00000008969)	pomt1 (ENSECRG00000008998)	ENSECRG00000009034	PLPP7 (ENSECRG00000009044)	ENSECRG00000009055	fibcd1b (ENSECRG00000009083)	traf1 (ENSECRG00000009160)	phf19 (ENSECRG00000009173)	ENSECRG00000009200	ENSECRG00000009215	ENSECRG00000009225	atp5l (ENSECRG00000009257)	UBE4A (ENSECRG00000009270)	ADAMTS13 (ENSECRG00000009338)	crata (ENSECRG00000009460) #21	ptpa (ENSECRG00000009507) #22	ier5l (ENSECRG00000009601) #23	ntmt1 (ENSECRG00000009612) #24	asb6 (ENSECRG00000009618) #25	RABL6 (ENSECRG00000009633)	ENSECRG00000009643	gapvd1 (ENSECRG00000009683)	MAPKAP1 (ENSECRG00000009753)	ENSECRG00000009763	pbx3b (ENSECRG00000009771)	ENSECRG00000009779	lmx1bb (ENSECRG00000009787)	zbtb43 (ENSECRG00000009793)	zbtb34 (ENSECRG00000009798)	ralgps1 (ENSECRG00000009806)	angptl2b (ENSECRG00000009827)