Theria	ANCESTRAL SPECIES	9	ENSGT00940000153451.a.a.a	ENSGT00940000157961.C #8	ENSGT00940000157982.b #9	ENSGT00940000156314 #10	ENSGT00940000160776 #11	ENSGT00390000012679 #12	ENSGT00940000155246 #13	ENSGT00550000074898 #14	ENSGT00940000153704.B #15	ENSGT00940000160397 #16	ENSGT00940000157439 #17	ENSGT00390000000603 #18	ENSGT00940000161315 #19	ENSGT00390000013474.b.a #20	ENSGT00940000161498 #21	ENSGT00940000159590 #22	ENSGT00640000092844	ENSGT00390000011219 #23	ENSGT00940000154534.a #24	ENSGT00390000000713 #25	ENSGT00390000004405.b #26	ENSGT00950000182892.a.b.a.a #27	ENSGT00940000154152.d #28	ENSGT00940000160113 #29	ENSGT00390000017856.b #30	ENSGT00940000172404	ENSGT00940000159503 #31	ENSGT00940000155029.c.b #32	ENSGT00940000159774 #33	ENSGT00940000162072 #34	ENSGT00940000158354 #35
Eutheria	ANCESTRAL SPECIES	4	ENSGT00940000153451.a.a.a	ENSGT00940000157961.C #8	ENSGT00940000157982.b #9	ENSGT00940000156314 #10	ENSGT00940000160776 #11	ENSGT00390000012679 #12	ENSGT00940000155246 #13	ENSGT00550000074898 #14	ENSGT00940000153704.B #15	ENSGT00940000160397 #16	ENSGT00940000157439 #17	ENSGT00390000000603 #18	ENSGT00940000161315 #19	ENSGT00390000013474.b.a #20	ENSGT00940000161498 #21	ENSGT00940000159590 #22	ENSGT00390000011219 #23	ENSGT00940000154534.a #24	ENSGT00390000000713 #25	ENSGT00390000004405.b #26	ENSGT00950000182892.a.b.a.a #27	ENSGT00940000154152.d #28	ENSGT00940000160113 #29	ENSGT00390000017856.b #30	ENSGT00940000159503 #31	ENSGT00940000155029.c.b #32	ENSGT00940000159774 #33	ENSGT00940000162072 #34	ENSGT00940000158354 #35	ENSGT00940000161108 #36	ENSGT00940000161230 #37
Boreoeutheria	ANCESTRAL SPECIES	4	ENSGT00940000157961.C #8	ENSGT00860000135964 #7	ENSGT00940000157982.b #9	ENSGT00940000156314 #10	ENSGT00940000160776 #11	ENSGT00390000012679 #12	ENSGT00940000155246 #13	ENSGT00550000074898 #14	ENSGT00940000153704.B #15	ENSGT00940000160397 #16	ENSGT00940000157439 #17	ENSGT00390000000603 #18	ENSGT00940000161315 #19	ENSGT00390000013474.b.a #20	ENSGT00940000161498 #21	ENSGT00940000159590 #22	ENSGT00390000011219 #23	ENSGT00940000154534.a #24	ENSGT00390000000713 #25	ENSGT00950000185410	ENSGT00390000004405.b #26	ENSGT00950000182892.a.b.a.a #27	ENSGT00940000154152.d.b #28	ENSGT00940000160113 #29	ENSGT00390000017856.b #30	ENSGT00940000159503 #31	ENSGT00940000155029.c.b #32	ENSGT00940000159774 #33	ENSGT00980000199681	ENSGT00940000162072 #34	ENSGT00940000158354 #35
Laurasiatheria	ANCESTRAL SPECIES	4	ENSGT00940000157961.C #8	ENSGT00860000135964 #7	ENSGT00940000157982.b #9	ENSGT00940000156314 #10	ENSGT00940000160776 #11	ENSGT00390000012679 #12	ENSGT00940000155246 #13	ENSGT00550000074898 #14	ENSGT00940000153704.B #15	ENSGT00940000160397 #16	ENSGT00940000157439 #17	ENSGT00390000000603 #18	ENSGT00940000161315 #19	ENSGT00390000013474.b.a #20	ENSGT00940000161498 #21	ENSGT00940000159590 #22	ENSGT00390000011219 #23	ENSGT00940000154534.a #24	ENSGT00390000000713 #25	ENSGT00950000185410	ENSGT00390000004405.b #26	ENSGT00950000182892.a.b.a.a #27	ENSGT00940000154152.d.b #28	ENSGT00940000160113 #29	ENSGT00390000017856.b #30	ENSGT00940000159503 #31	ENSGT00940000155029.c.b #32	ENSGT00940000159774 #33	ENSGT00980000199681	ENSGT00940000162072 #34	ENSGT00940000158354 #35
Laurasiatheria_a	ANCESTRAL SPECIES	4	ENSGT00940000157961.C #8	ENSGT00930000153020	ENSGT00940000157982.b #9	ENSGT00940000156314 #10	ENSGT00940000160776 #11	ENSGT00390000012679 #12	ENSGT00940000155246 #13	ENSGT00550000074898 #14	ENSGT00940000153704.B #15	ENSGT00940000160397 #16	ENSGT00940000157439 #17	ENSGT00390000000603 #18	ENSGT00940000161315 #19	ENSGT00390000013474.b.a #20	ENSGT00940000161498 #21	ENSGT00940000159590 #22	ENSGT00390000011219 #23	ENSGT00940000154534.a #24	ENSGT00390000000713 #25	ENSGT00390000004405.b #26	ENSGT00950000185410	ENSGT00950000182892.a.b.a.a #27	ENSGT00940000154152.d.b #28	ENSGT00940000160113 #29	ENSGT00390000017856.b #30	ENSGT00940000159503 #31	ENSGT00940000155029.c.b #32	ENSGT00940000159774 #33	ENSGT00980000199681	ENSGT00940000162072 #34	ENSGT00940000158354 #35
Artiodactyla	ANCESTRAL SPECIES	4	ENSGT00940000157961.C #8	ENSGT00930000153020	ENSGT00940000157982.b #9	ENSGT00940000156314 #10	ENSGT00940000160776 #11	ENSGT00390000012679 #12	ENSGT00940000155246 #13	ENSGT00550000074898 #14	ENSGT00940000153704.B #15	ENSGT00940000160397 #16	ENSGT00940000157439 #17	ENSGT00390000000603 #18	ENSGT00940000161315 #19	ENSGT00390000013474.b.a #20	ENSGT00940000161498 #21	ENSGT00940000159590 #22	ENSGT00390000011219 #23	ENSGT00940000154534.a #24	ENSGT00390000000713 #25	ENSGT00390000004405.b #26	ENSGT00950000185410	ENSGT00950000182892.a.b.a.a #27	ENSGT00940000154152.d.b #28	ENSGT00940000160113 #29	ENSGT00390000017856.b #30	ENSGT00940000159503 #31	ENSGT00940000155029.c.b #32	ENSGT00940000159774 #33	ENSGT00980000199681	ENSGT00940000162072 #34	ENSGT00940000158354 #35
Artiodactyla_a	ANCESTRAL SPECIES	3	ENSGT00940000157961.C #8	ENSGT00930000153020	ENSGT00940000157982.b #9	ENSGT00940000156314 #10	ENSGT00940000160776 #11	ENSGT00390000012679 #12	ENSGT00940000155246 #13	ENSGT00550000074898 #14	ENSGT00940000153704.B #15	ENSGT00940000160397 #16	ENSGT00940000157439 #17	ENSGT00390000000603 #18	ENSGT00940000161315 #19	ENSGT00390000013474.b.a #20	ENSGT00940000161498 #21	ENSGT00940000159590 #22	ENSGT00390000011219 #23	ENSGT00940000154534.a #24	ENSGT00390000000713 #25	ENSGT00390000004405.b #26	ENSGT00950000185410	ENSGT00950000182892.a.b.a.a #27	ENSGT00940000154152.d.b #28	ENSGT00940000160113 #29	ENSGT00390000017856.b #30	ENSGT00940000159503 #31	ENSGT00940000155029.c.b #32	ENSGT00940000159774 #33	ENSGT00980000199681	ENSGT00940000162072 #34	ENSGT00940000158354 #35
Artiodactyla_b	ANCESTRAL SPECIES	3	ENSGT00940000157961.C #8	ENSGT00930000153020	ENSGT00940000157982.b #9	ENSGT00940000156314 #10	ENSGT00940000160776 #11	ENSGT00390000012679 #12	ENSGT00940000155246 #13	ENSGT00550000074898 #14	ENSGT00940000153704.B #15	ENSGT00940000160397 #16	ENSGT00940000157439 #17	ENSGT00390000000603 #18	ENSGT00940000161315 #19	ENSGT00390000013474.b.a #20	ENSGT00940000161498 #21	ENSGT00940000159590 #22	ENSGT00390000011219 #23	ENSGT00940000154534.a #24	ENSGT00390000000713 #25	ENSGT00950000185410	ENSGT00390000004405.b #26	ENSGT00950000182892.a.b.a.a #27	ENSGT00940000154152.d.b #28	ENSGT00940000160113 #29	ENSGT00390000017856.b #30	ENSGT00940000159503 #31	ENSGT00940000155029.c.b #32	ENSGT00940000159774 #33	ENSGT00980000199681	ENSGT00940000162072 #34	ENSGT00940000158354 #35
Cetacea	ANCESTRAL SPECIES	5	ENSGT00860000135964 #7	ENSGT00940000157961.C #8	ENSGT00940000157982.b #9	ENSGT00940000156314 #10	ENSGT00940000160776 #11	ENSGT00390000012679 #12	ENSGT00940000155246 #13	ENSGT00550000074898 #14	ENSGT00940000153704.B #15	ENSGT00940000160397 #16	ENSGT00940000157439 #17	ENSGT00390000000603 #18	ENSGT00940000161315 #19	ENSGT00390000013474.b.a #20	ENSGT00940000161498 #21	ENSGT00940000159590 #22	ENSGT00390000011219 #23	ENSGT00940000154534.a #24	ENSGT00390000000713 #25	ENSGT00390000004405.b #26	ENSGT00950000182892.a.b.a.a #27	ENSGT00940000154152.d.b #28	ENSGT00940000160113 #29	ENSGT00390000017856.b #30	ENSGT00940000159503 #31	ENSGT00940000155029.c.b #32	ENSGT00940000159774 #33	ENSGT00940000162072 #34	ENSGT00940000158354 #35	ENSGT00940000161108 #36	ENSGT00940000161230 #37
Odontoceti	ANCESTRAL SPECIES	16	ENSGT00860000135964 #7	ENSGT00940000157961.C #8	ENSGT00940000157982.b #9	ENSGT00940000156314 #10	ENSGT00940000160776 #11	ENSGT00390000012679 #12	ENSGT00940000155246 #13	ENSGT00550000074898 #14	ENSGT00940000153704.B #15	ENSGT00940000160397 #16	ENSGT00940000157439 #17	ENSGT00390000000603 #18	ENSGT00940000161315 #19	ENSGT00390000013474.b.a #20	ENSGT00940000161498 #21	ENSGT00940000159590 #22	ENSGT00390000011219 #23	ENSGT00940000154534.a #24	ENSGT00390000000713 #25	ENSGT00390000004405.b #26	ENSGT00950000182892.a.b.a.a #27	ENSGT00940000154152.d.b #28	ENSGT00940000160113 #29	ENSGT00390000017856.b #30	ENSGT00940000159503 #31	ENSGT00940000155029.c.b #32	ENSGT00940000159774 #33	ENSGT00940000162072 #34	ENSGT00940000158354 #35	ENSGT00940000161108 #36	ENSGT00940000161230 #37
Odontoceti_a	ANCESTRAL SPECIES	14	ENSGT00860000135964 #7	ENSGT00940000157961.C #8	ENSGT00940000157982.b #9	ENSGT00940000156314 #10	ENSGT00940000160776 #11	ENSGT00390000012679 #12	ENSGT00940000155246 #13	ENSGT00550000074898 #14	ENSGT00940000153704.B #15	ENSGT00940000160397 #16	ENSGT00940000157439 #17	ENSGT00390000000603 #18	ENSGT00940000161315 #19	ENSGT00390000013474.b.a #20	ENSGT00940000161498 #21	ENSGT00940000159590 #22	ENSGT00390000011219 #23	ENSGT00940000154534.a #24	ENSGT00390000000713 #25	ENSGT00390000004405.b #26	ENSGT00950000182892.a.b.a.a #27	ENSGT00940000154152.d.b #28	ENSGT00940000160113 #29	ENSGT00390000017856.b #30	ENSGT00940000159503 #31	ENSGT00940000155029.c.b #32	ENSGT00940000159774 #33	ENSGT00940000162072 #34	ENSGT00940000158354 #35	ENSGT00940000161108 #36	ENSGT00940000161230 #37
Odontoceti_b	ANCESTRAL SPECIES	16	ENSGT00860000135964 #7	ENSGT00940000157961.C #8	ENSGT00940000157982.b #9	ENSGT00940000156314 #10	ENSGT00940000160776 #11	ENSGT00390000012679 #12	ENSGT00940000155246 #13	ENSGT00550000074898 #14	ENSGT00940000153704.B #15	ENSGT00940000160397 #16	ENSGT00940000157439 #17	ENSGT00390000000603 #18	ENSGT00940000161315 #19	ENSGT00390000013474.b.a #20	ENSGT00940000161498 #21	ENSGT00940000159590 #22	ENSGT00390000011219 #23	ENSGT00940000154534.a #24	ENSGT00390000000713 #25	ENSGT00390000004405.b #26	ENSGT00950000182892.a.b.a.a #27	ENSGT00940000154152.d.b #28	ENSGT00940000160113 #29	ENSGT00390000017856.b #30	ENSGT00940000159503 #31	ENSGT00940000155029.c.b #32	ENSGT00940000159774 #33	ENSGT00940000162072 #34	ENSGT00940000158354 #35	ENSGT00940000161108 #36	ENSGT00940000161230 #37
Monodontidae	ANCESTRAL SPECIES	16	ENSGT00940000157961.C #8	ENSGT00860000135964 #7	ENSGT00940000157982.b #9	ENSGT00940000156314 #10	ENSGT00940000160776 #11	ENSGT00390000012679 #12	ENSGT00940000155246 #13	ENSGT00550000074898 #14	ENSGT00940000153704.B #15	ENSGT00940000160397 #16	ENSGT00940000157439 #17	ENSGT00390000000603 #18	ENSGT00940000161315 #19	ENSGT00390000013474.b.a #20	ENSGT00940000161498 #21	ENSGT00940000159590 #22	ENSGT00390000011219 #23	ENSGT00940000154534.a #24	ENSGT00390000000713 #25	ENSGT00390000004405.b #26	ENSGT00950000182892.a.b.a.a #27	ENSGT00940000154152.d.b #28	ENSGT00940000160113 #29	ENSGT00390000017856.b #30	ENSGT00940000159503 #31	ENSGT00940000155029.c.b #32	ENSGT00940000159774 #33	ENSGT00940000162072 #34	ENSGT00940000158354 #35	ENSGT00940000161108 #36	ENSGT00940000161230 #37
Narwhal	MODERN SPECIES	316	ENSMMNG00015017965 #7	SRCIN1 (ENSMMNG00015017795) #8	ARHGAP23 (ENSMMNG00015017676) #9	SOCS7 (ENSMMNG00015017571) #10	GPR179 (ENSMMNG00015017480) #11	MRPL45 (ENSMMNG00015017435) #12	NPEPPS (ENSMMNG00015017277) #13	KPNB1 (ENSMMNG00015017215) #14	TBKBP1 (ENSMMNG00015017190) #15	TBX21 (ENSMMNG00015017166) #16	OSBPL7 (ENSMMNG00015017115) #17	MRPL10 (ENSMMNG00015017084) #18	LRRC46 (ENSMMNG00015017038) #19	SCRN2 (ENSMMNG00015016985) #20	SP6 (ENSMMNG00015016969) #21	SP2 (ENSMMNG00015016948) #22	PNPO (ENSMMNG00015016895) #23	PRR15L (ENSMMNG00015016868) #24	CDK5RAP3 (ENSMMNG00015016820) #25	COPZ2 (ENSMMNG00015016743) #26	NFE2L1 (ENSMMNG00015016634) #27	CBX1 (ENSMMNG00015016582) #28	SNX11 (ENSMMNG00015016452) #29	SKAP1 (ENSMMNG00015016386) #30	HOXB1 (ENSMMNG00015016356) #31	HOXB2 (ENSMMNG00015016324) #32	HOXB3 (ENSMMNG00015016287) #33	HOXB4 (ENSMMNG00015016252) #34	HOXB5 (ENSMMNG00015016235) #35	HOXB6 (ENSMMNG00015016215) #36	HOXB7 (ENSMMNG00015016197) #37
Beluga whale	MODERN SPECIES	26	SRCIN1 (ENSDLEG00000003944) #8	ENSDLEG00000003976 #7	ARHGAP23 (ENSDLEG00000003989) #9	SOCS7 (ENSDLEG00000004014) #10	GPR179 (ENSDLEG00000004032) #11	MRPL45 (ENSDLEG00000004037) #12	NPEPPS (ENSDLEG00000004076) #13	KPNB1 (ENSDLEG00000004223) #14	TBKBP1 (ENSDLEG00000004240) #15	TBX21 (ENSDLEG00000004247) #16	OSBPL7 (ENSDLEG00000004366) #17	MRPL10 (ENSDLEG00000004678) #18	ENSDLEG00000004684	SCRN2 (ENSDLEG00000004688) #20	SP6 (ENSDLEG00000004694) #21	SP2 (ENSDLEG00000004697) #22	PNPO (ENSDLEG00000004701) #23	PRR15L (ENSDLEG00000004704) #24	CDK5RAP3 (ENSDLEG00000004709) #25	COPZ2 (ENSDLEG00000004721) #26	ENSDLEG00000004734	NFE2L1 (ENSDLEG00000004744) #27	CBX1 (ENSDLEG00000004754) ##28	SNX11 (ENSDLEG00000004765) #29	SKAP1 (ENSDLEG00000004779) #30	HOXB1 (ENSDLEG00000004807) #31	HOXB2 (ENSDLEG00000004813) #32	HOXB3 (ENSDLEG00000004817) #33	HOXB4 (ENSDLEG00000004820) #34	HOXB5 (ENSDLEG00000004826) #35	HOXB6 (ENSDLEG00000004829) #36
Vaquita	MODERN SPECIES	12	ENSPSNG00000020092 #7	SRCIN1 (ENSPSNG00000019720) #8	ARHGAP23 (ENSPSNG00000019589) #9	SOCS7 (ENSPSNG00000019467) #10	GPR179 (ENSPSNG00000019300) #11	MRPL45 (ENSPSNG00000019227) #12	NPEPPS (ENSPSNG00000019016) #13	KPNB1 (ENSPSNG00000018946) #14	TBKBP1 (ENSPSNG00000018911) #15	TBX21 (ENSPSNG00000018852) #16	OSBPL7 (ENSPSNG00000018799) #17	ENSPSNG00000018757	LRRC46 (ENSPSNG00000018676) #19	SCRN2 (ENSPSNG00000018588) #20	SP6 (ENSPSNG00000018568) #21	SP2 (ENSPSNG00000018528) #22	PNPO (ENSPSNG00000018423) #23	PRR15L (ENSPSNG00000018399) #24	CDK5RAP3 (ENSPSNG00000018321) #25	COPZ2 (ENSPSNG00000018262) #26	NFE2L1 (ENSPSNG00000018052) #27	ENSPSNG00000017984 #28	SNX11 (ENSPSNG00000017889) #29	SKAP1 (ENSPSNG00000017760) #30	HOXB1 (ENSPSNG00000017728) #31	HOXB2 (ENSPSNG00000017708) #32	HOXB3 (ENSPSNG00000017636) #33	HOXB4 (ENSPSNG00000017604) #34	HOXB5 (ENSPSNG00000017559) #35	HOXB6 (ENSPSNG00000017525) #36	HOXB7 (ENSPSNG00000017482) #37
Dolphin	MODERN SPECIES	6789											OSBPL7 (ENSTTRG00000012411) #17	MRPL10 (ENSTTRG00000012452) #18	LRRC46 (ENSTTRG00000012463) #19	SCRN2 (ENSTTRG00000012472) #20	SP6 (ENSTTRG00000012481) #21	SP2 (ENSTTRG00000012483) #22	PNPO (ENSTTRG00000012493) #23
Sperm whale	MODERN SPECIES	5	ATP5MC1 (ENSPCTG00005004516)	CALCOCO2 (ENSPCTG00005004611)	TTLL6 (ENSPCTG00005004739)	HOXB13 (ENSPCTG00005004788)	HOXB9 (ENSPCTG00005004847)	HOXB8 (ENSPCTG00005004864)	HOXB7 (ENSPCTG00005004882) #37	HOXB6 (ENSPCTG00005004887) #36	HOXB5 (ENSPCTG00005004905) #35	HOXB4 (ENSPCTG00005004920) #34	HOXB3 (ENSPCTG00005004930) #33	HOXB2 (ENSPCTG00005004951) #32	HOXB1 (ENSPCTG00005004966) #31	SKAP1 (ENSPCTG00005004985) #30	CBX1 (ENSPCTG00005005034) #28	ENSPCTG00005005083 #22	TBX21 (ENSPCTG00005005105) #16	TBKBP1 (ENSPCTG00005005144) #15	KPNB1 (ENSPCTG00005005195) #14	NPEPPS (ENSPCTG00005005245) #13	GPR179 (ENSPCTG00005005545) #11	SOCS7 (ENSPCTG00005005634) #10	ARHGAP23 (ENSPCTG00005005753) #9	SRCIN1 (ENSPCTG00005005823) #8	ENSPCTG00005006189 #7	PSMB3 (ENSPCTG00005006224)	PIP4K2B (ENSPCTG00005006258)	CWC25 (ENSPCTG00005006298)	C14H17orf98 (ENSPCTG00005006357)	LASP1 (ENSPCTG00005006383)	FBXO47 (ENSPCTG00005006420)
Blue whale	MODERN SPECIES	12	ENSBMSG00010019467	ENSBMSG00010019451	STXBP4 (ENSBMSG00010019312)	COX11 (ENSBMSG00010019249)	ENSBMSG00010019021	KIF2B (ENSBMSG00010018945)	ENSBMSG00010018906	CA10 (ENSBMSG00010018845)	ENSBMSG00010018791	ENSBMSG00010018759	ENSBMSG00010018708	ENSBMSG00010018688	ENSBMSG00010018673	ENSBMSG00010018650	SP6 (ENSBMSG00010018628) #21	SP2 (ENSBMSG00010018607) #22	PNPO (ENSBMSG00010018544) #23	PRR15L (ENSBMSG00010018513) #24	CDK5RAP3 (ENSBMSG00010018481) #25	COPZ2 (ENSBMSG00010018306) #26	NFE2L1 (ENSBMSG00010018163) #27	CBX1 (ENSBMSG00010018099) #28	SNX11 (ENSBMSG00010018006) #29	SKAP1 (ENSBMSG00010017921) #30	HOXB1 (ENSBMSG00010017892) #31	HOXB2 (ENSBMSG00010017860) #32	HOXB3 (ENSBMSG00010017838) #33	HOXB4 (ENSBMSG00010017814) #34	HOXB5 (ENSBMSG00010017772) #35	HOXB6 (ENSBMSG00010017746) #36	HOXB7 (ENSBMSG00010017724) #37
Pecora	ANCESTRAL SPECIES	1	ENSGT00940000157961.C #8	ENSGT00930000153020	ENSGT00940000157982.b #9	ENSGT00940000156314 #10	ENSGT00940000160776 #11	ENSGT00390000012679 #12	ENSGT00940000155246 #13	ENSGT00550000074898 #14	ENSGT00940000153704.B #15	ENSGT00940000160397 #16	ENSGT00940000157439 #17	ENSGT00390000000603 #18	ENSGT00940000161315 #19	ENSGT00390000013474.b.a #20	ENSGT00940000161498 #21	ENSGT00940000159590 #22	ENSGT00390000011219 #23	ENSGT00940000154534.a #24	ENSGT00390000000713 #25	ENSGT00950000185410	ENSGT00390000004405.b #26	ENSGT00950000182892.a.b.a.a #27	ENSGT00940000154152.d.b #28	ENSGT00940000160113 #29	ENSGT00390000017856.b #30	ENSGT00940000159503 #31	ENSGT00940000155029.c.b #32	ENSGT00940000159774 #33	ENSGT00980000199681	ENSGT00940000162072 #34	ENSGT00940000158354 #35
Percora_a	ANCESTRAL SPECIES	2	ENSGT00940000157961.C #8	ENSGT00930000153020	ENSGT00940000157982.b #9	ENSGT00940000156314 #10	ENSGT00940000160776 #11	ENSGT00390000012679 #12	ENSGT00940000155246 #13	ENSGT00550000074898 #14	ENSGT00940000153704.B #15	ENSGT00940000160397 #16	ENSGT00940000157439 #17	ENSGT00390000000603 #18	ENSGT00940000161315 #19	ENSGT00390000013474.b.a #20	ENSGT00940000161498 #21	ENSGT00940000159590 #22	ENSGT00390000011219 #23	ENSGT00940000154534.a #24	ENSGT00390000000713 #25	ENSGT00390000004405.b #26	ENSGT00950000182892.a.b.a.a #27	ENSGT00940000154152.d.b #28	ENSGT00940000160113 #29	ENSGT00390000017856.b #30	ENSGT00940000159503 #31	ENSGT00940000155029.c.b #32	ENSGT00940000159774 #33	ENSGT00980000199681	ENSGT00940000162072 #34	ENSGT00940000158354 #35	ENSGT00940000161108 #36
Bovidae	ANCESTRAL SPECIES	2	ENSGT00940000157961.C #8	ENSGT00930000153020	ENSGT00940000157982.b #9	ENSGT00940000156314 #10	ENSGT00940000160776 #11	ENSGT00390000012679 #12	ENSGT00940000155246 #13	ENSGT00550000074898 #14	ENSGT00940000153704.B #15	ENSGT00940000160397 #16	ENSGT00940000157439 #17	ENSGT00390000000603 #18	ENSGT00940000161315 #19	ENSGT00390000013474.b.a #20	ENSGT00940000161498 #21	ENSGT00940000159590 #22	ENSGT00390000011219 #23	ENSGT00940000154534.a #24	ENSGT00390000000713 #25	ENSGT00390000004405.b #26	ENSGT00950000182892.a.b.a.a #27	ENSGT00940000154152.d.b #28	ENSGT00940000160113 #29	ENSGT00390000017856.b #30	ENSGT00940000159503 #31	ENSGT00940000155029.c.b #32	ENSGT00940000159774 #33	ENSGT00940000162072 #34	ENSGT00940000158354 #35	ENSGT00940000161108 #36	ENSGT00940000161230 #37
Caprinae	ANCESTRAL SPECIES	1	ENSGT00940000153451.a.a.a	ENSGT00940000157961.C #8	ENSGT00940000157982.b #9	ENSGT00940000156314 #10	ENSGT00940000160776 #11	ENSGT00390000012679 #12	ENSGT00940000155246 #13	ENSGT00550000074898 #14	ENSGT00940000153704.B #15	ENSGT00940000160397 #16	ENSGT00940000157439 #17	ENSGT00390000000603 #18	ENSGT00940000161315 #19	ENSGT00390000013474.b.a #20	ENSGT00940000161498 #21	ENSGT00940000159590 #22	ENSGT00390000011219 #23	ENSGT00940000154534.a #24	ENSGT00390000000713 #25	ENSGT00390000004405.b #26	ENSGT00950000182892.a.b.a.a #27	ENSGT00940000154152.d.b #28	ENSGT00940000160113 #29	ENSGT00390000017856.b #30	ENSGT00940000154688.b.j	ENSGT00940000159503 #31	ENSGT00940000155029.c.b #32	ENSGT00940000159774 #33	ENSGT00940000162072 #34	ENSGT00940000158354 #35	ENSGT00940000161108 #36
Rambouillet Sheep	DUPLICATION
Rambouillet Sheep	MODERN SPECIES	2	ENSOARG00020018303	SRCIN1 (ENSOARG00020018349) #8	ARHGAP23 (ENSOARG00020019239) #9	SOCS7 (ENSOARG00020019553) #10	GPR179 (ENSOARG00020019685) #11	MRPL45 (ENSOARG00020019879) #12	NPEPPS (ENSOARG00020020009) #13	KPNB1 (ENSOARG00020020287) #14	TBKBP1 (ENSOARG00020020372) #15	TBX21 (ENSOARG00020020433) #16	OSBPL7 (ENSOARG00020020494) #17	MRPL10 (ENSOARG00020020614) #18	LRRC46 (ENSOARG00020020663) #19	SCRN2 (ENSOARG00020020770) #20	SP6 (ENSOARG00020020944) #21	SP2 (ENSOARG00020020972) #22	PNPO (ENSOARG00020021017) #23	PRR15L (ENSOARG00020021319) #24	CDK5RAP3 (ENSOARG00020021339) #25	COPZ2 (ENSOARG00020021377) #26	NFE2L1 (ENSOARG00020021460) #27	CBX1 (ENSOARG00020021741) #28	SNX11 (ENSOARG00020021783) #29	SKAP1 (ENSOARG00020021817) #30	HOXB1 (ENSOARG00020021886) #31	HOXB2 (ENSOARG00020021907) #32	HOXB3 (ENSOARG00020021943) #33	HOXB4 (ENSOARG00020021954) #34	HOXB5 (ENSOARG00020022004) #35	HOXB6 (ENSOARG00020022021) #36	HOXB7 (ENSOARG00020022042) #37
Rambouillet Sheep	MODERN SPECIES	6	RNF214 (ENSOARG00020003821)	BACE1 (ENSOARG00020004145)	ENSOARG00020004547	DSCAML1 (ENSOARG00020006009)	FXYD2 (ENSOARG00020006659)	FXYD6 (ENSOARG00020006743)	TMPRSS13 (ENSOARG00020006885)	IL10RA (ENSOARG00020007104)	SMIM35 (ENSOARG00020007401)	TMPRSS4 (ENSOARG00020007492)	SCN4B (ENSOARG00020008129)	SCN2B (ENSOARG00020008245)	JAML (ENSOARG00020008303)	MPZL3 (ENSOARG00020008369)	MPZL2 (ENSOARG00020008415)	ENSOARG00020008464 #22	CD3E (ENSOARG00020008497)	CD3D (ENSOARG00020008660)	CD3G (ENSOARG00020008794)	UBE4A (ENSOARG00020008890)	ENSOARG00020008962	KMT2A (ENSOARG00020009065)	TTC36 (ENSOARG00020010334)	TMEM25 (ENSOARG00020010366)	IFT46 (ENSOARG00020010461)	ARCN1 (ENSOARG00020011031)	PHLDB1 (ENSOARG00020011300)	TREH (ENSOARG00020011898)	DDX6 (ENSOARG00020012273)	CXCR5 (ENSOARG00020012413)	BCL9L (ENSOARG00020012453)
Goat	MODERN SPECIES	10	ENSCHIG00000019374	SRCIN1 (ENSCHIG00000022297) #8	ARHGAP23 (ENSCHIG00000023996) #9	SOCS7 (ENSCHIG00000012449) #10	GPR179 (ENSCHIG00000026098) #11	MRPL45 (ENSCHIG00000014110) #12	NPEPPS (ENSCHIG00000022782) #13	KPNB1 (ENSCHIG00000014896) #14	TBKBP1 (ENSCHIG00000016860) #15	TBX21 (ENSCHIG00000021993) #16	OSBPL7 (ENSCHIG00000023060) #17	MRPL10 (ENSCHIG00000027033) #18	LRRC46 (ENSCHIG00000015497) #19	SCRN2 (ENSCHIG00000026802) #20	SP6 (ENSCHIG00000009897) #21	SP2 (ENSCHIG00000018648) #22	PNPO (ENSCHIG00000004606) #23	PRR15L (ENSCHIG00000008261) #24	CDK5RAP3 (ENSCHIG00000025420) #25	COPZ2 (ENSCHIG00000026544) #26	NFE2L1 (ENSCHIG00000015427) #27	CBX1 (ENSCHIG00000010985) #28	SNX11 (ENSCHIG00000017547) #29	ENSCHIG00000026878 #30	ENSCHIG00000015920 #30	ENSCHIG00000010180	HOXB1 (ENSCHIG00000017872) #31	HOXB2 (ENSCHIG00000025836) #32	HOXB3 (ENSCHIG00000013978) #33	HOXB4 (ENSCHIG00000025323) #34	HOXB5 (ENSCHIG00000023147) #35
Bovinae	ANCESTRAL SPECIES		ENSGT00930000153020	ENSGT00940000157982.b #9	ENSGT00940000156314 #10	ENSGT00940000160776 #11	ENSGT00390000012679 #12	ENSGT00960000190232	ENSGT00940000155246 #13	ENSGT00550000074898 #14	ENSGT00940000153704.B #15	ENSGT00940000160397 #16	ENSGT00940000157439 #17	ENSGT00390000000603 #18	ENSGT00940000161315 #19	ENSGT00390000013474.b.a #20	ENSGT00940000161498 #21	ENSGT00940000159590 #22	ENSGT00390000011219 #23	ENSGT00940000154534.a #24	ENSGT00390000000713 #25	ENSGT00390000004405.b #26	ENSGT00950000182892.a.b.a.a #27	ENSGT00940000154152.d.b #28	ENSGT00940000160113 #29	ENSGT00390000017856.b #30	ENSGT00940000159503 #31	ENSGT00940000155029.c.b #32	ENSGT00940000159774 #33	ENSGT00940000162072 #34	ENSGT00940000158354 #35	ENSGT00940000161108 #36	ENSGT00940000161230 #37
American bison	MODERN SPECIES	3101	ENSBBBG00000022356 #7	ENSBBBG00000005896 #9	SOCS7 (ENSBBBG00000005889) #10	ENSBBBG00000005882 #11	MRPL45 (ENSBBBG00000022294) #12	ENSBBBG00000022252	NPEPPS (ENSBBBG00000022236) #13	KPNB1 (ENSBBBG00000022131) #14	ENSBBBG00000022076 #15	TBX21 (ENSBBBG00000005826) #16	OSBPL7 (ENSBBBG00000022056) #17	MRPL10 (ENSBBBG00000021983) #18	LRRC46 (ENSBBBG00000021972) #19	SCRN2 (ENSBBBG00000021958) #20	SP6 (ENSBBBG00000021924) #21	SP2 (ENSBBBG00000021914) #22	PNPO (ENSBBBG00000021862) #23	PRR15L (ENSBBBG00000021809) #24	CDK5RAP3 (ENSBBBG00000021808) #25	COPZ2 (ENSBBBG00000021782) #26	NFE2L1 (ENSBBBG00000021740) #27	ENSBBBG00000021675 ##28	SNX11 (ENSBBBG00000021652) #29	SKAP1 (ENSBBBG00000021634) #30	HOXB1 (ENSBBBG00000021601) #31	HOXB2 (ENSBBBG00000021598) #32	HOXB3 (ENSBBBG00000005740) #33	HOXB4 (ENSBBBG00000021585) #34	HOXB5 (ENSBBBG00000021577) #35	HOXB6 (ENSBBBG00000021567) #36	HOXB7 (ENSBBBG00000021565) #37
Bos	DUPLICATION
Bos	DUPLICATION
Bos	DUPLICATION
Bos	ANCESTRAL SPECIES																	ENSGT00940000159590.e.a.a #22
Bos_b	ANCESTRAL SPECIES																	ENSGT00940000159590.e.a.a #22
Hybrid Bos Indicus	DUPLICATION
Hybrid Bos Indicus	MODERN SPECIES	27	TEX10 (ENSBIXG00005028410)	ENSBIXG00005007787	ENSBIXG00005004856	ENSBIXG00005004847	ENSBIXG00005028169	ENSBIXG00005028091	ENSBIXG00005028069	ENSBIXG00005004822	LPL (ENSBIXG00005028031)	ENSBIXG00005027982	SLC18A1 (ENSBIXG00005027964)	ATP6V1B2 (ENSBIXG00005027918)	LZTS1 (ENSBIXG00005027830)	ENSBIXG00005027774	ENSBIXG00005027763	ENSBIXG00005027749 #22	ENSBIXG00005027723	ENSBIXG00005004760	GFRA2 (ENSBIXG00005027647)	DOK2 (ENSBIXG00005004736)	XPO7 (ENSBIXG00005027512)	NPM2 (ENSBIXG00005027463)	FGF17 (ENSBIXG00005027428)	DMTN (ENSBIXG00005027387)	FHIP2B (ENSBIXG00005004662)	NUDT18 (ENSBIXG00005027121)	HR (ENSBIXG00005027087)	REEP4 (ENSBIXG00005027035)	LGI3 (ENSBIXG00005004632)	SFTPC (ENSBIXG00005004620)	BMP1 (ENSBIXG00005026935)
Hybrid Bos Indicus	MODERN SPECIES	315	ENSBIXG00005023432	ENSBIXG00005023472	GPC4 (ENSBIXG00005004018)	ENSBIXG00005004032	ENSBIXG00005023613	GPC3 (ENSBIXG00005023687)	PHF6 (ENSBIXG00005023899)	ENSBIXG00005023941	PABIR2 (ENSBIXG00005007177)	MOSPD1 (ENSBIXG00005024236)	ENSBIXG00005024246	ENSBIXG00005006288	ENSBIXG00005024346	ENSBIXG00005024359	ENSBIXG00005024383	ENSBIXG00005024425 #22	ENSBIXG00005024448	ENSBIXG00005024564	ZNF449 (ENSBIXG00005024616)	ENSBIXG00005024630	ENSBIXG00005024668	ENSBIXG00005024681	INTS6L (ENSBIXG00005024755)	ENSBIXG00005024777	ENSBIXG00005024820	SLC9A6 (ENSBIXG00005024885)	ENSBIXG00005024891	FHL1 (ENSBIXG00005025100)	ENSBIXG00005025140	ENSBIXG00005025166	BRS3 (ENSBIXG00005025192)
Bos_a	ANCESTRAL SPECIES																	ENSGT00940000159590.e.a.a #22
Wild yak	MODERN SPECIES	319																SP2 (ENSBMUG00000001179) #22	PNPO (ENSBMUG00000001160) #23	ENSBMUG00000001125 #24	CDK5RAP3 (ENSBMUG00000001110) #25	COPZ2 (ENSBMUG00000001081) #26	NFE2L1 (ENSBMUG00000001054) #27	CBX1 (ENSBMUG00000000974) #28	SNX11 (ENSBMUG00000000953) #29	SKAP1 (ENSBMUG00000000925) #30	ENSBMUG00000000901	HOXB1 (ENSBMUG00000000891) #31	HOXB2 (ENSBMUG00000000885) #32	HOXB3 (ENSBMUG00000000876) #33	HOXB4 (ENSBMUG00000000867) #34	HOXB5 (ENSBMUG00000000849) #35	HOXB6 (ENSBMUG00000000839) #36
Bos	ANCESTRAL SPECIES																	ENSGT00940000159590.e.a.b #22
Bos_b	ANCESTRAL SPECIES																	ENSGT00940000159590.e.a.b #22
Hybrid Bos Indicus	MODERN SPECIES	10	SRCIN1 (ENSBIXG00005030456) #8	ARHGAP23 (ENSBIXG00005030331) #9	SOCS7 (ENSBIXG00005030269) #10	GPR179 (ENSBIXG00005030235) #11	ENSBIXG00005030228	MRPL45 (ENSBIXG00005030219) #12	NPEPPS (ENSBIXG00005030159) #13	KPNB1 (ENSBIXG00005030131) #14	TBKBP1 (ENSBIXG00005030097) #15	TBX21 (ENSBIXG00005030084) #16	OSBPL7 (ENSBIXG00005030039) #17	MRPL10 (ENSBIXG00005030023) #18	LRRC46 (ENSBIXG00005030008) #19	SCRN2 (ENSBIXG00005029976) #20	SP6 (ENSBIXG00005029948) #21	ENSBIXG00005029934 #22	PNPO (ENSBIXG00005029918) #23	PRR15L (ENSBIXG00005029905) #24	CDK5RAP3 (ENSBIXG00005029886) #25	COPZ2 (ENSBIXG00005029862) #26	NFE2L1 (ENSBIXG00005029748) #27	CBX1 (ENSBIXG00005029691) #28	SNX11 (ENSBIXG00005029679) #29	SKAP1 (ENSBIXG00005029657) #30	ENSBIXG00005029636	HOXB1 (ENSBIXG00005029618) #31	HOXB2 (ENSBIXG00005029607) #32	HOXB3 (ENSBIXG00005029591) #33	HOXB4 (ENSBIXG00005029577) #34	HOXB5 (ENSBIXG00005029559) #35	HOXB6 (ENSBIXG00005029554) #36
Bos	ANCESTRAL SPECIES	1	ENSGT00930000153020	ENSGT00940000157982.b #9	ENSGT00940000156314 #10	ENSGT00940000160776 #11	ENSGT00960000190232	ENSGT00390000012679 #12	ENSGT00940000155246 #13	ENSGT00550000074898 #14	ENSGT00940000153704.B #15	ENSGT00940000160397 #16	ENSGT00940000157439 #17	ENSGT00390000000603 #18	ENSGT00940000161315 #19	ENSGT00390000013474.b.a #20	ENSGT00940000161498 #21	ENSGT00940000159590.e.b #22	ENSGT00390000011219 #23	ENSGT00940000154534.a #24	ENSGT00390000000713 #25	ENSGT00390000004405.b #26	ENSGT00950000182892.a.b.a.a #27	ENSGT00940000154152.d.b.i #28	ENSGT00940000160113 #29	ENSGT00390000017856.b #30	ENSGT00940000154688.b.k.a	ENSGT00940000159503 #31	ENSGT00940000155029.c.b #32	ENSGT00940000159774 #33	ENSGT00940000162072 #34	ENSGT00940000158354 #35	ENSGT00940000161108 #36
Bos_b	ANCESTRAL SPECIES	15	ENSGT00940000157961.C #8	ENSGT00940000157982.b #9	ENSGT00940000156314 #10	ENSGT00940000160776 #11	ENSGT00960000190232	ENSGT00390000012679 #12	ENSGT00940000155246 #13	ENSGT00550000074898 #14	ENSGT00940000153704.B #15	ENSGT00940000160397 #16	ENSGT00940000157439 #17	ENSGT00390000000603 #18	ENSGT00940000161315 #19	ENSGT00390000013474.b.a #20	ENSGT00940000161498 #21	ENSGT00940000159590.e.b #22	ENSGT00390000011219 #23	ENSGT00940000154534.a #24	ENSGT00390000000713 #25	ENSGT00390000004405.b #26	ENSGT00950000182892.a.b.a.a #27	ENSGT00940000154152.d.b.i #28	ENSGT00940000160113 #29	ENSGT00390000017856.b #30	ENSGT00940000154688.b.k.a	ENSGT00940000159503 #31	ENSGT00940000155029.c.b #32	ENSGT00940000159774 #33	ENSGT00940000162072 #34	ENSGT00940000158354 #35	ENSGT00940000161108 #36
Cow	MODERN SPECIES	10	SRCIN1 (ENSBTAG00000013469) #8	ARHGAP23 (ENSBTAG00000016911) #9	SOCS7 (ENSBTAG00000008535) #10	GPR179 (ENSBTAG00000001804) #11	ENSBTAG00000049522	MRPL45 (ENSBTAG00000025001) #12	NPEPPS (ENSBTAG00000011435) #13	KPNB1 (ENSBTAG00000006586) #14	TBKBP1 (ENSBTAG00000011280) #15	TBX21 (ENSBTAG00000014199) #16	OSBPL7 (ENSBTAG00000013523) #17	MRPL10 (ENSBTAG00000001832) #18	LRRC46 (ENSBTAG00000001830) #19	SCRN2 (ENSBTAG00000001828) #20	SP6 (ENSBTAG00000001825) #21	SP2 (ENSBTAG00000013740) #22	PNPO (ENSBTAG00000012259) #23	PRR15L (ENSBTAG00000012249) #24	CDK5RAP3 (ENSBTAG00000014202) #25	COPZ2 (ENSBTAG00000039954) #26	NFE2L1 (ENSBTAG00000013653) #27	CBX1 (ENSBTAG00000002949) #28	SNX11 (ENSBTAG00000020321) #29	SKAP1 (ENSBTAG00000000641) #30	HOXB1 (ENSBTAG00000007603) #31	HOXB2 (ENSBTAG00000009979) #32	HOXB3 (ENSBTAG00000021427) #33	HOXB4 (ENSBTAG00000039599) #34	HOXB5 (ENSBTAG00000045835) #35	HOXB6 (ENSBTAG00000050006) #36	HOXB7 (ENSBTAG00000005546) #37
Bos_a	ANCESTRAL SPECIES		ENSGT00930000153020	ENSGT00940000157982.b #9	ENSGT00940000156314 #10	ENSGT00940000160776 #11	ENSGT00960000190232	ENSGT00390000012679 #12	ENSGT00940000155246 #13	ENSGT00550000074898 #14	ENSGT00940000153704.B #15	ENSGT00940000160397 #16	ENSGT00940000157439 #17	ENSGT00390000000603 #18	ENSGT00940000161315 #19	ENSGT00390000013474.b.a #20	ENSGT00940000161498 #21	ENSGT00940000159590.e.b #22	ENSGT00390000011219 #23	ENSGT00940000154534.a #24	ENSGT00390000000713 #25	ENSGT00390000004405.b #26	ENSGT00950000182892.a.b.a.a #27	ENSGT00940000154152.d.b.i #28	ENSGT00940000160113 #29	ENSGT00390000017856.b #30	ENSGT00940000154688.b.k.a	ENSGT00940000159503 #31	ENSGT00940000155029.c.b #32	ENSGT00940000159774 #33	ENSGT00940000162072 #34	ENSGT00940000158354 #35	ENSGT00940000161108 #36
Domestic yak	MODERN SPECIES	10	ENSBGRG00000016987	ARHGAP23 (ENSBGRG00000017050) #9	SOCS7 (ENSBGRG00000017476) #10	ENSBGRG00000017816 #11	MRPL45 (ENSBGRG00000017975) #12	ENSBGRG00000018222	NPEPPS (ENSBGRG00000018276) #13	KPNB1 (ENSBGRG00000018571) #14	TBKBP1 (ENSBGRG00000019067) #15	TBX21 (ENSBGRG00000019171) #16	OSBPL7 (ENSBGRG00000019260) #17	MRPL10 (ENSBGRG00000019422) #18	LRRC46 (ENSBGRG00000019490) #19	SCRN2 (ENSBGRG00000019672) #20	SP6 (ENSBGRG00000019744) #21	ENSBGRG00000019774 #22	PNPO (ENSBGRG00000019898) #23	ENSBGRG00000020194 #24	CDK5RAP3 (ENSBGRG00000020283) #25	COPZ2 (ENSBGRG00000020574) #26	NFE2L1 (ENSBGRG00000020783) #27	CBX1 (ENSBGRG00000021062) #28	SNX11 (ENSBGRG00000021141) #29	SKAP1 (ENSBGRG00000021202) #30	HOXB1 (ENSBGRG00000021404) #31	HOXB2 (ENSBGRG00000021425) #32	HOXB3 (ENSBGRG00000021464) #33	HOXB4 (ENSBGRG00000021501) #34	HOXB5 (ENSBGRG00000021555) #35	HOXB6 (ENSBGRG00000021579) #36	HOXB8 (ENSBGRG00000021618)
Bos	ANCESTRAL SPECIES																	ENSGT00940000159590.f #22
Bos_a	ANCESTRAL SPECIES																	ENSGT00940000159590.f #22
Domestic yak	MODERN SPECIES	13	ALPK2 (ENSBGRG00000014330)	MALT1 (ENSBGRG00000014428)	ZNF532 (ENSBGRG00000014854)	ENSBGRG00000014978	SEC11C (ENSBGRG00000015083)	ENSBGRG00000015203	RAX (ENSBGRG00000015248)	CPLX4 (ENSBGRG00000015391)	LMAN1 (ENSBGRG00000015446)	CCBE1 (ENSBGRG00000015792)	ENSBGRG00000015958	PMAIP1 (ENSBGRG00000015982)	MC4R (ENSBGRG00000016023)	ENSBGRG00000016053	ENSBGRG00000016227	ENSBGRG00000016258 #22	ENSBGRG00000016321	ENSBGRG00000016372	ENSBGRG00000016450	CDH20 (ENSBGRG00000016472)	RNF152 (ENSBGRG00000016707)	PIGN (ENSBGRG00000016802)	RELCH (ENSBGRG00000017550)	TNFRSF11A (ENSBGRG00000018261)	ZCCHC2 (ENSBGRG00000018501)	BCL2 (ENSBGRG00000019339)	ENSBGRG00000019385	KDSR (ENSBGRG00000019413)	VPS4B (ENSBGRG00000019724)	SERPINB5 (ENSBGRG00000019802)	SERPINB12 (ENSBGRG00000019909)
Siberian musk deer	MODERN SPECIES	1210	ARHGAP23 (ENSMMSG00000019156) #9	SOCS7 (ENSMMSG00000019056) #10	GPR179 (ENSMMSG00000018906) #11	MRPL45 (ENSMMSG00000018849) #12	ENSMMSG00000018805	NPEPPS (ENSMMSG00000018632) #13	KPNB1 (ENSMMSG00000018546) #14	TBKBP1 (ENSMMSG00000018512) #15	TBX21 (ENSMMSG00000018475) #16	ENSMMSG00000018451	OSBPL7 (ENSMMSG00000018422) #17	MRPL10 (ENSMMSG00000018396) #18	LRRC46 (ENSMMSG00000018351) #19	SCRN2 (ENSMMSG00000018238) #20	SP6 (ENSMMSG00000018224) #21	SP2 (ENSMMSG00000024551) #22	PNPO (ENSMMSG00000024550) #23	PRR15L (ENSMMSG00000024549) #24	CDK5RAP3 (ENSMMSG00000024548) #25	COPZ2 (ENSMMSG00000024546) #26	NFE2L1 (ENSMMSG00000024541) #27	CBX1 (ENSMMSG00000024540) #28	SNX11 (ENSMMSG00000024538) #29	SKAP1 (ENSMMSG00000024536) #30	ENSMMSG00000024535	HOXB1 (ENSMMSG00000024533) #31	HOXB2 (ENSMMSG00000024532) #32	HOXB3 (ENSMMSG00000024531) #33	ENSMMSG00000024530	HOXB4 (ENSMMSG00000024528) #34	HOXB5 (ENSMMSG00000024526) #35
Yarkand deer	MODERN SPECIES	28	ENSCHYG00000000749	ARHGAP23 (ENSCHYG00000000727) #9	SOCS7 (ENSCHYG00000000633) #10	GPR179 (ENSCHYG00000000586) #11	MRPL45 (ENSCHYG00000000557) #12	NPEPPS (ENSCHYG00000000456) #13	ENSCHYG00000000411	KPNB1 (ENSCHYG00000000360) #14	TBKBP1 (ENSCHYG00000000333) #15	TBX21 (ENSCHYG00000000318) #16	OSBPL7 (ENSCHYG00000000286) #17	MRPL10 (ENSCHYG00000000265) #18	LRRC46 (ENSCHYG00000000251) #19	SCRN2 (ENSCHYG00000000227) #20	SP6 (ENSCHYG00000000221) #21	SP2 (ENSCHYG00000000198) #22	PNPO (ENSCHYG00000000157) #23	PRR15L (ENSCHYG00000000125) #24	CDK5RAP3 (ENSCHYG00000000101) #25	ENSCHYG00000004851	COPZ2 (ENSCHYG00000004829) #26	NFE2L1 (ENSCHYG00000004781) #27	CBX1 (ENSCHYG00000004750) #28	SNX11 (ENSCHYG00000004737) #29	ENSCHYG00000004720	SKAP1 (ENSCHYG00000004692) #30	HOXB1 (ENSCHYG00000004684) #31	HOXB2 (ENSCHYG00000004674) #32	HOXB3 (ENSCHYG00000004670) #33	HOXB4 (ENSCHYG00000004668) #34	HOXB5 (ENSCHYG00000004658) #35
Camelidae	ANCESTRAL SPECIES	60	ENSGT00860000135964 #7	ENSGT00940000157961.C #8	ENSGT00940000157982.b #9	ENSGT00940000156314 #10	ENSGT00940000160776 #11	ENSGT00390000012679 #12	ENSGT00940000155246 #13	ENSGT00550000074898 #14	ENSGT00940000153704.B #15	ENSGT00940000160397 #16	ENSGT00940000157439 #17	ENSGT00390000000603 #18	ENSGT00940000161315 #19	ENSGT00390000013474.b.a #20	ENSGT00940000161498 #21	ENSGT00940000159590 #22	ENSGT00940000154534.a #24	ENSGT00390000000713 #25	ENSGT00390000004405.b #26	ENSGT00950000185410	ENSGT00950000182892.a.b.a.a #27	ENSGT00940000154152.d.b #28	ENSGT00940000154152.d.a.a ##28	ENSGT00940000160113 #29	ENSGT00390000017856.b #30	ENSGT00940000159503 #31	ENSGT00940000155029.c.b #32	ENSGT00940000159774 #33	ENSGT00940000162072 #34	ENSGT00940000158354 #35	ENSGT00940000161108 #36
Arabian camel	MODERN SPECIES	7	ENSCDRG00005019591 #7	SRCIN1 (ENSCDRG00005019469) #8	ENSCDRG00005019433 #9	SOCS7 (ENSCDRG00005019385) #10	GPR179 (ENSCDRG00005019342) #11	MRPL45 (ENSCDRG00005019287) #12	NPEPPS (ENSCDRG00005019119) #13	KPNB1 (ENSCDRG00005019017) #14	TBKBP1 (ENSCDRG00005018994) #15	TBX21 (ENSCDRG00005018980) #16	OSBPL7 (ENSCDRG00005018943) #17	MRPL10 (ENSCDRG00005018906) #18	LRRC46 (ENSCDRG00005018865) #19	SCRN2 (ENSCDRG00005018805) #20	SP6 (ENSCDRG00005018791) #21	SP2 (ENSCDRG00005018756) #22	PRR15L (ENSCDRG00005018636) #24	CDK5RAP3 (ENSCDRG00005018564) #25	COPZ2 (ENSCDRG00005018538) #26	ENSCDRG00005018515	NFE2L1 (ENSCDRG00005018357) #27	CBX1 (ENSCDRG00005018330) ##28	SNX11 (ENSCDRG00005018232) #29	SKAP1 (ENSCDRG00005018166) #30	HOXB1 (ENSCDRG00005018147) #31	HOXB2 (ENSCDRG00005018121) #32	HOXB3 (ENSCDRG00005018104) #33	HOXB4 (ENSCDRG00005018079) #34	HOXB5 (ENSCDRG00005018055) #35	HOXB6 (ENSCDRG00005018029) #36	HOXB7 (ENSCDRG00005018007) #37
Alpaca	MODERN SPECIES	6028															MRPL10 (ENSVPAG00000004498) #18	SP2 (ENSVPAG00000004499) #22
Suina	ANCESTRAL SPECIES		ENSGT00860000135964 #7	ENSGT00930000153020	ENSGT00940000157982.b #9	ENSGT00940000156314 #10	ENSGT00940000160776 #11	ENSGT00390000012679 #12	ENSGT00940000155246 #13	ENSGT00550000074898 #14	ENSGT00940000153704.B #15	ENSGT00940000160397 #16	ENSGT00940000157439 #17	ENSGT00390000000603 #18	ENSGT00940000161315 #19	ENSGT00390000013474.b.a #20	ENSGT00940000161498 #21	ENSGT00940000159590 #22	ENSGT00390000011219 #23	ENSGT00940000154534.a #24	ENSGT00390000000713 #25	ENSGT00390000004405.b #26	ENSGT00950000182892.a.b.a.a #27	ENSGT00940000154152.d.b #28	ENSGT00940000160113 #29	ENSGT00390000017856.b #30	ENSGT00940000159503 #31	ENSGT00940000155029.c.b #32	ENSGT00940000159774 #33	ENSGT00940000162072 #34	ENSGT00940000158354 #35	ENSGT00940000161108 #36	ENSGT00940000161230 #37
Chacoan peccary	MODERN SPECIES	145	EPOP (ENSCWAG00000001220)	SRCIN1 (ENSCWAG00000001149) #8	ARHGAP23 (ENSCWAG00000001049) #9	SOCS7 (ENSCWAG00000001002) #10	GPR179 (ENSCWAG00000000941) #11	MRPL45 (ENSCWAG00000000905) #12	NPEPPS (ENSCWAG00000000826) #13	KPNB1 (ENSCWAG00000000755) #14	TBKBP1 (ENSCWAG00000000726) #15	TBX21 (ENSCWAG00000000709) #16	OSBPL7 (ENSCWAG00000000623) #17	MRPL10 (ENSCWAG00000000589) #18	LRRC46 (ENSCWAG00000000570) #19	SCRN2 (ENSCWAG00000000520) #20	SP6 (ENSCWAG00000000502) #21	SP2 (ENSCWAG00000000474) #22	PNPO (ENSCWAG00000000427) #23	PRR15L (ENSCWAG00000000410) #24	CDK5RAP3 (ENSCWAG00000000377) #25	COPZ2 (ENSCWAG00000000341) #26	NFE2L1 (ENSCWAG00000000185) #27	CBX1 (ENSCWAG00000000121) #28	SNX11 (ENSCWAG00000000070) #29	SKAP1 (ENSCWAG00000000046) #30	HOXB1 (ENSCWAG00000022080) #31	HOXB2 (ENSCWAG00000022078) #32	HOXB3 (ENSCWAG00000022077) #33	HOXB4 (ENSCWAG00000022074) #34	HOXB5 (ENSCWAG00000022071) #35	HOXB6 (ENSCWAG00000022069) #36	HOXB7 (ENSCWAG00000022067) #37
Pig	MODERN SPECIES	3	ENSSSCG00000046446 #7	ENSSSCG00000045701	ARHGAP23 (ENSSSCG00000018058) #9	SOCS7 (ENSSSCG00000018057) #10	GPR179 (ENSSSCG00000020884) #11	MRPL45 (ENSSSCG00000023263) #12	NPEPPS (ENSSSCG00000017513) #13	KPNB1 (ENSSSCG00000017514) #14	ENSSSCG00000057498 #15	TBX21 (ENSSSCG00000017517) #16	OSBPL7 (ENSSSCG00000017518) #17	MRPL10 (ENSSSCG00000017519) #18	LRRC46 (ENSSSCG00000017520) #19	SCRN2 (ENSSSCG00000017521) #20	SP6 (ENSSSCG00000017522) #21	SP2 (ENSSSCG00000017516) #22	PNPO (ENSSSCG00000032782) #23	PRR15L (ENSSSCG00000054179) #24	CDK5RAP3 (ENSSSCG00000017524) #25	COPZ2 (ENSSSCG00000017526) #26	NFE2L1 (ENSSSCG00000017525) #27	CBX1 (ENSSSCG00000017529) #28	SNX11 (ENSSSCG00000017528) #29	SKAP1 (ENSSSCG00000017527) #30	HOXB1 (ENSSSCG00000017532) #31	HOXB2 (ENSSSCG00000017533) #32	HOXB3 (ENSSSCG00000017534) #33	HOXB4 (ENSSSCG00000017535) #34	HOXB5 (ENSSSCG00000017540) #35	HOXB6 (ENSSSCG00000017539) #36	HOXB7 (ENSSSCG00000017538) #37
Laurasiatheria_b	ANCESTRAL SPECIES	4	ENSGT00940000157961.C #8	ENSGT00930000153020	ENSGT00940000157982.b #9	ENSGT00940000156314 #10	ENSGT00940000160776 #11	ENSGT00390000012679 #12	ENSGT00940000155246 #13	ENSGT00550000074898 #14	ENSGT00940000153704.B #15	ENSGT00940000160397 #16	ENSGT00940000157439 #17	ENSGT00390000000603 #18	ENSGT00940000161315 #19	ENSGT00390000013474.b.a #20	ENSGT00940000161498 #21	ENSGT00940000159590 #22	ENSGT00390000011219 #23	ENSGT00940000154534.a #24	ENSGT00390000000713 #25	ENSGT00390000004405.b #26	ENSGT00950000185410	ENSGT00950000182892.a.b.a.a #27	ENSGT00940000154152.d.b #28	ENSGT00940000160113 #29	ENSGT00390000017856.b #30	ENSGT00940000159503 #31	ENSGT00940000155029.c.b #32	ENSGT00940000159774 #33	ENSGT00980000199681	ENSGT00940000162072 #34	ENSGT00940000158354 #35
Laurasiatheria_c	ANCESTRAL SPECIES	3	ENSGT00940000153451.a.a.a	ENSGT00940000157961.C #8	ENSGT00940000157982.b #9	ENSGT00940000156314 #10	ENSGT00940000160776 #11	ENSGT00390000012679 #12	ENSGT00940000155246 #13	ENSGT00550000074898 #14	ENSGT00940000153704.B #15	ENSGT00940000160397 #16	ENSGT00940000157439 #17	ENSGT00390000000603 #18	ENSGT00940000161315 #19	ENSGT00390000013474.b.a #20	ENSGT00940000161498 #21	ENSGT00940000159590 #22	ENSGT00390000011219 #23	ENSGT00940000154534.a #24	ENSGT00390000000713 #25	ENSGT00390000004405.b #26	ENSGT00950000182892.a.b.a.a #27	ENSGT00940000154152.d.b #28	ENSGT00940000160113 #29	ENSGT00390000017856.b #30	ENSGT00940000159503 #31	ENSGT00940000155029.c.b #32	ENSGT00940000159774 #33	ENSGT00980000199681	ENSGT00940000162072 #34	ENSGT00940000158354 #35	ENSGT00940000161108 #36
Equus	ANCESTRAL SPECIES		ENSGT00940000153451.a.a.a	ENSGT00940000157961.C #8	ENSGT00940000157982.b #9	ENSGT00940000156314 #10	ENSGT00940000160776 #11	ENSGT00390000012679 #12	ENSGT00940000155246 #13	ENSGT00550000074898 #14	ENSGT00940000153704.B #15	ENSGT00940000160397 #16	ENSGT00940000157439 #17	ENSGT00390000000603 #18	ENSGT00940000161315 #19	ENSGT00390000013474.b.a #20	ENSGT00940000161498 #21	ENSGT00940000159590 #22	ENSGT00390000011219 #23	ENSGT00940000154534.a #24	ENSGT00390000000713 #25	ENSGT00390000004405.b #26	ENSGT00950000182892.a.b.a.a #27	ENSGT00940000154152.d.b #28	ENSGT00940000160113 #29	ENSGT00390000017856.b #30	ENSGT00940000159503 #31	ENSGT00940000155029.c.b #32	ENSGT00940000159774 #33	ENSGT00940000162072 #34	ENSGT00940000158354 #35	ENSGT00940000161108 #36	ENSGT00940000161230 #37
Horse	MODERN SPECIES	2	MLLT6 (ENSECAG00000012082)	EPOP (ENSECAG00000036519)	SRCIN1 (ENSECAG00000014219) #8	ARHGAP23 (ENSECAG00000031942) #9	SOCS7 (ENSECAG00000021699) #10	GPR179 (ENSECAG00000021843) #11	MRPL45 (ENSECAG00000000590) #12	NPEPPS (ENSECAG00000007392) #13	KPNB1 (ENSECAG00000014560) #14	TBKBP1 (ENSECAG00000016107) #15	TBX21 (ENSECAG00000018160) #16	OSBPL7 (ENSECAG00000019067) #17	LRRC46 (ENSECAG00000007543) #19	SCRN2 (ENSECAG00000009826) #20	SP6 (ENSECAG00000012853) #21	SP2 (ENSECAG00000012859) #22	PNPO (ENSECAG00000014995) #23	PRR15L (ENSECAG00000002658) #24	CDK5RAP3 (ENSECAG00000018688) #25	COPZ2 (ENSECAG00000024471) #26	NFE2L1 (ENSECAG00000007777) #27	CBX1 (ENSECAG00000008048) #28	SNX11 (ENSECAG00000008117) #29	SKAP1 (ENSECAG00000010544) #30	HOXB1 (ENSECAG00000011628) #31	HOXB2 (ENSECAG00000012423) #32	HOXB3 (ENSECAG00000002707) #33	HOXB4 (ENSECAG00000028576) #34	HOXB5 (ENSECAG00000012439) #35	HOXB8 (ENSECAG00000034473) #37	HOXB9 (ENSECAG00000036001)
Donkey	MODERN SPECIES	4	EPOP (ENSEASG00005029689)	SRCIN1 (ENSEASG00005001556) #8	ARHGAP23 (ENSEASG00005001497) #9	SOCS7 (ENSEASG00005001492) #10	ENSEASG00005001474 #11	ENSEASG00005001461 #12	ENSEASG00005000896 #13	KPNB1 (ENSEASG00005000805) #14	TBKBP1 (ENSEASG00005000756) #15	TBX21 (ENSEASG00005000739) #16	OSBPL7 (ENSEASG00005000733) #17	MRPL10 (ENSEASG00005027403) #18	LRRC46 (ENSEASG00005000676) #19	SCRN2 (ENSEASG00005000671) #20	SP6 (ENSEASG00005036407) #21	SP2 (ENSEASG00005000667) #22	PNPO (ENSEASG00005028794) #23	PRR15L (ENSEASG00005000660) #24	CDK5RAP3 (ENSEASG00005000658) #25	COPZ2 (ENSEASG00005000641) #26	NFE2L1 (ENSEASG00005000634) #27	CBX1 (ENSEASG00005000607) #28	SNX11 (ENSEASG00005000605) #29	SKAP1 (ENSEASG00005000601) #30	HOXB1 (ENSEASG00005000594) #31	HOXB2 (ENSEASG00005000585) #32	HOXB3 (ENSEASG00005000581) #33	HOXB6 (ENSEASG00005000560) #36	HOXB5 (ENSEASG00005000563) #35	HOXB7 (ENSEASG00005000556) #37	HOXB8 (ENSEASG00005024978)
Chiroptera	ANCESTRAL SPECIES	2	ENSGT00940000153451.a.a.a	ENSGT00940000157961.C #8	ENSGT00940000157982.b #9	ENSGT00940000156314 #10	ENSGT00940000160776 #11	ENSGT00390000012679 #12	ENSGT00940000155246 #13	ENSGT00550000074898 #14	ENSGT00940000153704.B #15	ENSGT00940000160397 #16	ENSGT00940000157439 #17	ENSGT00390000000603 #18	ENSGT00940000161315 #19	ENSGT00390000013474.b.a #20	ENSGT00940000161498 #21	ENSGT00940000159590 #22	ENSGT00390000011219 #23	ENSGT00940000154534.a #24	ENSGT00390000000713 #25	ENSGT00390000004405.b #26	ENSGT00950000182892.a.b.a.a #27	ENSGT00940000154152.d.b #28	ENSGT00940000160113 #29	ENSGT00390000017856.b #30	ENSGT00940000159503 #31	ENSGT00940000155029.c.b #32	ENSGT00940000159774 #33	ENSGT00980000199681	ENSGT00940000162072 #34	ENSGT00940000158354 #35	ENSGT00940000161108 #36
Megabat	MODERN SPECIES	2332											OSBPL7 (ENSPVAG00000004250) #17	MRPL10 (ENSPVAG00000004251) #18	LRRC46 (ENSPVAG00000004252) #19	SCRN2 (ENSPVAG00000004253) #20	SP6 (ENSPVAG00000004254) #21	SP2 (ENSPVAG00000004255) #22	PNPO (ENSPVAG00000004256) #23	CDK5RAP3 (ENSPVAG00000004258) #25	COPZ2 (ENSPVAG00000004259) #26
Microchiroptera	ANCESTRAL SPECIES		ENSGT00940000153451.a.a.a	ENSGT00940000157961.C #8	ENSGT00940000157982.b #9	ENSGT00940000156314 #10	ENSGT00940000160776 #11	ENSGT00390000012679 #12	ENSGT00940000155246 #13	ENSGT00550000074898 #14	ENSGT00940000153704.B #15	ENSGT00940000160397 #16	ENSGT00940000157439 #17	ENSGT00390000000603 #18	ENSGT00940000161315 #19	ENSGT00390000013474.b.a #20	ENSGT00940000161498 #21	ENSGT00940000159590 #22	ENSGT00390000011219 #23	ENSGT00940000154534.a #24	ENSGT00390000000713 #25	ENSGT00390000004405.b #26	ENSGT00950000182892.a.b.a.a #27	ENSGT00940000154152.d.b #28	ENSGT00940000160113 #29	ENSGT00390000017856.b #30	ENSGT00940000159503 #31	ENSGT00940000155029.c.b #32	ENSGT00940000159774 #33	ENSGT00980000199681	ENSGT00940000162072 #34	ENSGT00940000158354 #35	ENSGT00940000161108 #36
Microbat	MODERN SPECIES	1191					SOCS7 (ENSMLUG00000002876) #10	GPR179 (ENSMLUG00000002866) #11	MRPL45 (ENSMLUG00000002863) #12	NPEPPS (ENSMLUG00000013342) #13	KPNB1 (ENSMLUG00000014522) #14	TBKBP1 (ENSMLUG00000014537) #15	TBX21 (ENSMLUG00000014542) #16	OSBPL7 (ENSMLUG00000006392) #17	MRPL10 (ENSMLUG00000006405) #18	LRRC46 (ENSMLUG00000006409) #19	SCRN2 (ENSMLUG00000006417) #20	SP2 (ENSMLUG00000005000) #22	PNPO (ENSMLUG00000005003) #23	PRR15L (ENSMLUG00000005012) #24	CDK5RAP3 (ENSMLUG00000005014) #25	NFE2L1 (ENSMLUG00000005024) #27	CBX1 (ENSMLUG00000005030) #28	SNX11 (ENSMLUG00000005033) #29	SKAP1 (ENSMLUG00000005037) #30	HOXB1 (ENSMLUG00000008429) #31	HOXB3 (ENSMLUG00000008445) #33	ENSMLUG00000027291	ENSMLUG00000014513 #35	HOXB6 (ENSMLUG00000010649) #36	HOXB7 (ENSMLUG00000002609) #37	HOXB9 (ENSMLUG00000011677)	ENSMLUG00000029480
Greater horseshoe bat	MODERN SPECIES	13	EPOP (ENSRFEG00010009672)	SRCIN1 (ENSRFEG00010009277) #8	ARHGAP23 (ENSRFEG00010009067) #9	SOCS7 (ENSRFEG00010008940) #10	GPR179 (ENSRFEG00010008688) #11	MRPL45 (ENSRFEG00010008623) #12	NPEPPS (ENSRFEG00010008553) #13	KPNB1 (ENSRFEG00010008460) #14	TBKBP1 (ENSRFEG00010008412) #15	TBX21 (ENSRFEG00010008382) #16	OSBPL7 (ENSRFEG00010008272) #17	MRPL10 (ENSRFEG00010008230) #18	LRRC46 (ENSRFEG00010008197) #19	SCRN2 (ENSRFEG00010021961) #20	SP6 (ENSRFEG00010021957) #21	SP2 (ENSRFEG00010021950) #22	PNPO (ENSRFEG00010021942) #23	PRR15L (ENSRFEG00010021936) #24	CDK5RAP3 (ENSRFEG00010021928) #25	COPZ2 (ENSRFEG00010021918) #26	NFE2L1 (ENSRFEG00010021900) #27	CBX1 (ENSRFEG00010021893) #28	SNX11 (ENSRFEG00010021879) #29	SKAP1 (ENSRFEG00010021866) #30	HOXB1 (ENSRFEG00010021864) #31	HOXB2 (ENSRFEG00010021859) #32	HOXB3 (ENSRFEG00010021853) #33	ENSRFEG00010021849	HOXB4 (ENSRFEG00010021844) #34	HOXB5 (ENSRFEG00010021836) #35	HOXB6 (ENSRFEG00010021831) #36
Carnivora	ANCESTRAL SPECIES	9	ENSGT00940000157961.C #8	ENSGT00930000153020	ENSGT00940000157982.b #9	ENSGT00940000156314 #10	ENSGT00940000160776 #11	ENSGT00390000012679 #12	ENSGT00940000155246 #13	ENSGT00550000074898 #14	ENSGT00940000153704.B #15	ENSGT00940000160397 #16	ENSGT00940000157439 #17	ENSGT00390000000603 #18	ENSGT00940000161315 #19	ENSGT00390000013474.b.a #20	ENSGT00940000161498 #21	ENSGT00940000159590 #22	ENSGT00390000011219 #23	ENSGT00940000154534.a #24	ENSGT00390000000713 #25	ENSGT00390000004405.b #26	ENSGT00950000185410	ENSGT00950000182892.a.b.a.a #27	ENSGT00940000154152.d.b #28	ENSGT00940000160113 #29	ENSGT00390000017856.b #30	ENSGT00940000159503 #31	ENSGT00940000155029.c.b #32	ENSGT00940000159774 #33	ENSGT00940000162072 #34	ENSGT00940000158354 #35	ENSGT00940000161108 #36
Felidae	ANCESTRAL SPECIES	8	ENSGT00940000157961.C #8	ENSGT00930000153020	ENSGT00940000157982.b #9	ENSGT00940000156314 #10	ENSGT00940000160776 #11	ENSGT00390000012679.i #12	ENSGT00940000155246 #13	ENSGT00550000074898 #14	ENSGT00940000153704.B #15	ENSGT00940000160397 #16	ENSGT00940000157439 #17	ENSGT00390000000603 #18	ENSGT00940000161315 #19	ENSGT00390000013474.b.a #20	ENSGT00940000161498 #21	ENSGT00940000159590 #22	ENSGT00390000011219 #23	ENSGT00940000154534.a #24	ENSGT00390000000713 #25	ENSGT00390000004405.b #26	ENSGT00950000185410	ENSGT00950000182892.a.b.a.a #27	ENSGT00940000154152.d.b #28	ENSGT00940000160113 #29	ENSGT00390000017856.b #30	ENSGT00390000013771.p	ENSGT00940000159503 #31	ENSGT00940000155029.c.b #32	ENSGT00940000159774 #33	ENSGT00940000162072 #34	ENSGT00940000158354 #35
Cat	MODERN SPECIES	245	ENSFCAG00000048827 #7	SRCIN1 (ENSFCAG00000005817) #8	ARHGAP23 (ENSFCAG00000005816) #9	SOCS7 (ENSFCAG00000005815) #10	GPR179 (ENSFCAG00000005812) #11	MRPL45 (ENSFCAG00000005808) #12	NPEPPS (ENSFCAG00000027844) #13	KPNB1 (ENSFCAG00000023994) #14	TBKBP1 (ENSFCAG00000010605) #15	TBX21 (ENSFCAG00000010607) #16	OSBPL7 (ENSFCAG00000009359) #17	MRPL10 (ENSFCAG00000009360) #18	LRRC46 (ENSFCAG00000045119) #19	SCRN2 (ENSFCAG00000009362) #20	SP6 (ENSFCAG00000009363) #21	SP2 (ENSFCAG00000009365) #22	PNPO (ENSFCAG00000001300) #23	PRR15L (ENSFCAG00000009366) #24	CDK5RAP3 (ENSFCAG00000009367) #25	COPZ2 (ENSFCAG00000034233) #26	NFE2L1 (ENSFCAG00000009369) #27	CBX1 (ENSFCAG00000006056) ##28	SNX11 (ENSFCAG00000009371) #29	SKAP1 (ENSFCAG00000004784) #30	ENSFCAG00000034133	HOXB1 (ENSFCAG00000028151) #31	HOXB2 (ENSFCAG00000045039) #32	HOXB3 (ENSFCAG00000006408) #33	HOXB4 (ENSFCAG00000051422) #34	HOXB5 (ENSFCAG00000039068) #35	HOXB6 (ENSFCAG00000034768) #36
Panthera	ANCESTRAL SPECIES	14	ENSGT00940000157961.C #8	ENSGT00930000153020	ENSGT00940000157982.b #9	ENSGT00940000156314 #10	ENSGT00940000160776 #11	ENSGT00390000012679.i.a.a #12	ENSGT00940000155246 #13	ENSGT00550000074898 #14	ENSGT00940000153704.B #15	ENSGT00940000160397 #16	ENSGT00940000157439 #17	ENSGT00390000000603 #18	ENSGT00940000161315 #19	ENSGT00390000013474.b.a #20	ENSGT00940000161498 #21	ENSGT00940000159590 #22	ENSGT00390000011219 #23	ENSGT00390000000713 #25	ENSGT00940000154534.a #24	ENSGT00390000004405.b #26	ENSGT00950000185410	ENSGT00950000182892.a.b.a.a #27	ENSGT00940000154152.d.b #28	ENSGT00940000160113 #29	ENSGT00390000017856.b #30	ENSGT00390000013771.p	ENSGT00940000159503 #31	ENSGT00940000155029.c.b #32	ENSGT00940000159774 #33	ENSGT00940000162072 #34	ENSGT00940000158354 #35
Panthera_a	ANCESTRAL SPECIES	13	ENSGT00930000153020	ENSGT00940000157982.b #9	ENSGT00940000156314 #10	ENSGT00940000160776 #11	ENSGT00390000012679.i.b #12	ENSGT00390000012679.i.a.a #12	ENSGT00940000155246 #13	ENSGT00550000074898 #14	ENSGT00940000153704.B #15	ENSGT00940000160397 #16	ENSGT00940000157439 #17	ENSGT00390000000603 #18	ENSGT00940000161315 #19	ENSGT00390000013474.b.a #20	ENSGT00940000161498 #21	ENSGT00940000159590 #22	ENSGT00390000011219 #23	ENSGT00390000000713 #25	ENSGT00940000154534.a #24	ENSGT00390000004405.b #26	ENSGT00950000182892.a.b.a.a #27	ENSGT00940000154152.d.b #28	ENSGT00940000160113 #29	ENSGT00390000017856.b #30	ENSGT00390000013771.p	ENSGT00940000159503 #31	ENSGT00940000155029.c.b #32	ENSGT00940000159774 #33	ENSGT00940000162072 #34	ENSGT00940000158354 #35	ENSGT00940000161108 #36
lion	MODERN SPECIES	14	EPOP (ENSPLOG00000006763)	SRCIN1 (ENSPLOG00000006464) #8	ARHGAP23 (ENSPLOG00000006163) #9	SOCS7 (ENSPLOG00000006096) #10	GPR179 (ENSPLOG00000006047) #11	MRPL45 (ENSPLOG00000006010) #12	NPEPPS (ENSPLOG00000005888) #13	KPNB1 (ENSPLOG00000005771) #14	TBKBP1 (ENSPLOG00000005658) #15	TBX21 (ENSPLOG00000005640) #16	OSBPL7 (ENSPLOG00000005563) #17	MRPL10 (ENSPLOG00000005459) #18	LRRC46 (ENSPLOG00000005433) #19	SCRN2 (ENSPLOG00000022130) #20	SP6 (ENSPLOG00000022115) #21	SP2 (ENSPLOG00000022101) #22	PRR15L (ENSPLOG00000022093) #24	CDK5RAP3 (ENSPLOG00000022033) #25	COPZ2 (ENSPLOG00000021972) #26	NFE2L1 (ENSPLOG00000021931) #27	CBX1 (ENSPLOG00000021907) #28	SNX11 (ENSPLOG00000021872) #29	SKAP1 (ENSPLOG00000021790) #30	ENSPLOG00000021761	HOXB1 (ENSPLOG00000021742) #31	HOXB2 (ENSPLOG00000021733) #32	HOXB3 (ENSPLOG00000021711) #33	HOXB4 (ENSPLOG00000021697) #34	HOXB5 (ENSPLOG00000021683) #35	HOXB6 (ENSPLOG00000021669) #36	HOXB7 (ENSPLOG00000021659) #37
leopard	MODERN SPECIES	67	SRCIN1 (ENSPPRG00000011073) #8	ENSPPRG00000011407	ARHGAP23 (ENSPPRG00000012371) #9	SOCS7 (ENSPPRG00000012918) #10	GPR179 (ENSPPRG00000013909) #11	ENSPPRG00000014693 #12	NPEPPS (ENSPPRG00000020677) #13	KPNB1 (ENSPPRG00000022879) #14	TBKBP1 (ENSPPRG00000000101) #15	TBX21 (ENSPPRG00000000491) #16	ENSPPRG00000001011 #17	MRPL10 (ENSPPRG00000001188) #18	LRRC46 (ENSPPRG00000001915) #19	SCRN2 (ENSPPRG00000002730) #20	SP6 (ENSPPRG00000016089) #21	SP2 (ENSPPRG00000003332) #22	PNPO (ENSPPRG00000005037) #23	CDK5RAP3 (ENSPPRG00000006376) #25	COPZ2 (ENSPPRG00000006801) #26	NFE2L1 (ENSPPRG00000009101) #27	CBX1 (ENSPPRG00000009475) #28	SNX11 (ENSPPRG00000012061) #29	SKAP1 (ENSPPRG00000015336) #30	ENSPPRG00000016613	ENSPPRG00000017115	HOXB1 (ENSPPRG00000017656) #31	HOXB2 (ENSPPRG00000020926) #32	HOXB3 (ENSPPRG00000022415) #33	HOXB4 (ENSPPRG00000000220) #34	HOXB5 (ENSPPRG00000000333) #35	HOXB6 (ENSPPRG00000000532) #36
Tiger	MODERN SPECIES	230	PCGF2 (ENSPTIG00000013278)	CISD3 (ENSPTIG00000012358)	MLLT6 (ENSPTIG00000007153)	SRCIN1 (ENSPTIG00000021759) #8	ARHGAP23 (ENSPTIG00000018889) #9	SOCS7 (ENSPTIG00000017283) #10	MRPL45 (ENSPTIG00000013013) #12	NPEPPS (ENSPTIG00000010447) #13	KPNB1 (ENSPTIG00000006870) #14	ENSPTIG00000005274 #15	TBX21 (ENSPTIG00000001553) #16	ENSPTIG00000019388 #17	MRPL10 (ENSPTIG00000018968) #18	LRRC46 (ENSPTIG00000018466) #19	SCRN2 (ENSPTIG00000016232) #20	SP2 (ENSPTIG00000014873) #22	PNPO (ENSPTIG00000012157) #23	CDK5RAP3 (ENSPTIG00000009086) #25	COPZ2 (ENSPTIG00000007508) #26	ENSPTIG00000007047	NFE2L1 (ENSPTIG00000021715) #27	CBX1 (ENSPTIG00000020896) ##28	SNX11 (ENSPTIG00000018316) #29	SKAP1 (ENSPTIG00000016493) #30	HOXB1 (ENSPTIG00000015694) #31	HOXB2 (ENSPTIG00000015306) #32	HOXB4 (ENSPTIG00000014995) #34	HOXB5 (ENSPTIG00000014877) #35	HOXB7 (ENSPTIG00000014471) #37	ENSPTIG00000013326	TTLL6 (ENSPTIG00000010570)
Caniformia	ANCESTRAL SPECIES	6	ENSGT00860000135964 #7	ENSGT00930000153020	ENSGT00940000157982.b #9	ENSGT00940000156314 #10	ENSGT00940000160776 #11	ENSGT00390000012679 #12	ENSGT00940000155246 #13	ENSGT00550000074898 #14	ENSGT00940000153704.B #15	ENSGT00940000160397 #16	ENSGT00940000157439 #17	ENSGT00390000000603 #18	ENSGT00940000161315 #19	ENSGT00390000013474.b.a #20	ENSGT00940000161498 #21	ENSGT00940000159590 #22	ENSGT00390000011219 #23	ENSGT00940000154534.a #24	ENSGT00390000000713 #25	ENSGT00390000004405.b #26	ENSGT00950000185410	ENSGT00950000182892.a.b.a.a #27	ENSGT00940000154152.d.b #28	ENSGT00940000160113 #29	ENSGT00390000017856.b #30	ENSGT00940000159503 #31	ENSGT00940000155029.c.b #32	ENSGT00940000159774 #33	ENSGT00940000162072 #34	ENSGT00940000158354 #35	ENSGT00940000161108 #36
Canidae	ANCESTRAL SPECIES	2	ENSGT00940000153451.a.a.a	ENSGT00940000157961.C #8	ENSGT00940000157982.b #9	ENSGT00940000156314 #10	ENSGT00940000160776 #11	ENSGT00390000012679 #12	ENSGT00940000155246 #13	ENSGT00550000074898 #14	ENSGT00940000153704.B #15	ENSGT00940000160397 #16	ENSGT00940000157439 #17	ENSGT00390000000603 #18	ENSGT00940000161315 #19	ENSGT00390000013474.b.a #20	ENSGT00940000161498 #21	ENSGT00940000159590 #22	ENSGT00390000011219 #23	ENSGT00940000154534.a #24	ENSGT00390000000713 #25	ENSGT00390000004405.b #26	ENSGT00950000182892.a.b.a.a #27	ENSGT00940000154152.d.b #28	ENSGT00940000160113 #29	ENSGT00390000017856.b #30	ENSGT00940000159503 #31	ENSGT00940000155029.c.b #32	ENSGT00940000159774 #33	ENSGT00940000162072 #34	ENSGT00940000158354 #35	ENSGT00940000161108 #36	ENSGT00940000161230 #37
Canis_lupus	ANCESTRAL SPECIES	3	ENSGT00940000153451.a.a.a	ENSGT00940000157961.C #8	ENSGT00940000157982.b #9	ENSGT00940000156314 #10	ENSGT00940000160776 #11	ENSGT00390000012679 #12	ENSGT00940000155246 #13	ENSGT00550000074898 #14	ENSGT00940000153704.B #15	ENSGT00940000160397 #16	ENSGT00940000157439 #17	ENSGT00390000000603 #18	ENSGT00940000161315 #19	ENSGT00390000013474.b.a #20	ENSGT00940000161498 #21	ENSGT00940000159590 #22	ENSGT00390000011219 #23	ENSGT00940000154534.a #24	ENSGT00390000000713 #25	ENSGT00390000004405.b #26	ENSGT00950000182892.a.b.a.a #27	ENSGT00940000154152.d.b #28	ENSGT00940000160113 #29	ENSGT00390000017856.b #30	ENSGT00940000159503 #31	ENSGT00940000155029.c.b #32	ENSGT00940000159774 #33	ENSGT00940000162072 #34	ENSGT00940000158354 #35	ENSGT00940000161108 #36	ENSGT00940000161230 #37
Dingo	MODERN SPECIES	150	ENSCAFG00020023090 #8	ARHGAP23 (ENSCAFG00020023111) #9	SOCS7 (ENSCAFG00020023179) #10	GPR179 (ENSCAFG00020023180) #11	MRPL45 (ENSCAFG00020023186) #12	ENSCAFG00020023199	NPEPPS (ENSCAFG00020023203) #13	KPNB1 (ENSCAFG00020023205) #14	TBKBP1 (ENSCAFG00020023210) #15	TBX21 (ENSCAFG00020023221) #16	OSBPL7 (ENSCAFG00020023225) #17	MRPL10 (ENSCAFG00020023232) #18	LRRC46 (ENSCAFG00020023236) #19	SCRN2 (ENSCAFG00020023238) #20	SP6 (ENSCAFG00020023243) #21	SP2 (ENSCAFG00020023246) #22	PNPO (ENSCAFG00020023249) #23	PRR15L (ENSCAFG00020023256) #24	CDK5RAP3 (ENSCAFG00020023258) #25	COPZ2 (ENSCAFG00020023263) #26	NFE2L1 (ENSCAFG00020023270) #27	CBX1 (ENSCAFG00020023275) #28	SNX11 (ENSCAFG00020023282) #29	SKAP1 (ENSCAFG00020023287) #30	HOXB1 (ENSCAFG00020023290) #31	HOXB2 (ENSCAFG00020023293) #32	HOXB3 (ENSCAFG00020023294) #33	HOXB4 (ENSCAFG00020023297) #34	HOXB5 (ENSCAFG00020023301) #35	HOXB6 (ENSCAFG00020023302) #36	ENSCAFG00020023303 #37
Dog	MODERN SPECIES	37	EPOP (ENSCAFG00845014204)	SRCIN1 (ENSCAFG00845014295) #8	ARHGAP23 (ENSCAFG00845014513) #9	SOCS7 (ENSCAFG00845014686) #10	GPR179 (ENSCAFG00845014777) #11	ENSCAFG00845014840 #12	NPEPPS (ENSCAFG00845014931) #13	KPNB1 (ENSCAFG00845015226) #14	TBKBP1 (ENSCAFG00845015281) #15	TBX21 (ENSCAFG00845015330) #16	OSBPL7 (ENSCAFG00845015415) #17	MRPL10 (ENSCAFG00845015539) #18	LRRC46 (ENSCAFG00845015603) #19	SCRN2 (ENSCAFG00845015686) #20	SP6 (ENSCAFG00845015746) #21	SP2 (ENSCAFG00845015786) #22	PNPO (ENSCAFG00845015876) #23	PRR15L (ENSCAFG00845015978) #24	ENSCAFG00845016000	CDK5RAP3 (ENSCAFG00845016051) #25	COPZ2 (ENSCAFG00845016156) #26	NFE2L1 (ENSCAFG00845016388) #27	CBX1 (ENSCAFG00845016596) #28	SNX11 (ENSCAFG00845016720) #29	SKAP1 (ENSCAFG00845016959) #30	HOXB1 (ENSCAFG00845017096) #31	HOXB2 (ENSCAFG00845017142) #32	HOXB3 (ENSCAFG00845017188) #33	HOXB4 (ENSCAFG00845017264) #34	HOXB5 (ENSCAFG00845009832) #35	HOXB6 (ENSCAFG00845009871) #36
Red fox	MODERN SPECIES	20	EPOP (ENSVVUG00000002338)	SRCIN1 (ENSVVUG00000002377) #8	ARHGAP23 (ENSVVUG00000002610) #9	SOCS7 (ENSVVUG00000002941) #10	GPR179 (ENSVVUG00000002981) #11	MRPL45 (ENSVVUG00000003030) #12	NPEPPS (ENSVVUG00000003061) #13	KPNB1 (ENSVVUG00000003085) #14	ENSVVUG00000003100 #15	TBX21 (ENSVVUG00000003106) #16	ENSVVUG00000003127 #17	MRPL10 (ENSVVUG00000003141) #18	LRRC46 (ENSVVUG00000003146) #19	SCRN2 (ENSVVUG00000003154) #20	SP6 (ENSVVUG00000003167) #21	SP2 (ENSVVUG00000003171) #22	PNPO (ENSVVUG00000003178) #23	PRR15L (ENSVVUG00000003218) #24	CDK5RAP3 (ENSVVUG00000003227) #25	COPZ2 (ENSVVUG00000003249) #26	NFE2L1 (ENSVVUG00000003262) #27	ENSVVUG00000003272 #28	SNX11 (ENSVVUG00000003276) #29	SKAP1 (ENSVVUG00000003297) #30	HOXB1 (ENSVVUG00000003325) #31	HOXB2 (ENSVVUG00000003328) #32	HOXB3 (ENSVVUG00000003329) #33	ENSVVUG00000003340 #34	HOXB5 (ENSVVUG00000003354) #35	HOXB6 (ENSVVUG00000003359) #36	HOXB7 (ENSVVUG00000003360) #37
Caniformia_b	ANCESTRAL SPECIES	21	ENSGT00860000135964 #7	ENSGT00930000153020	ENSGT00940000157982.b #9	ENSGT00940000156314 #10	ENSGT00940000160776 #11	ENSGT00390000012679 #12	ENSGT00940000155246 #13	ENSGT00550000074898 #14	ENSGT00940000153704.B #15	ENSGT00940000160397 #16	ENSGT00940000157439 #17	ENSGT00390000000603 #18	ENSGT00940000161315 #19	ENSGT00390000013474.b.a #20	ENSGT00940000161498 #21	ENSGT00940000159590 #22	ENSGT00390000011219 #23	ENSGT00940000154534.a #24	ENSGT00390000000713 #25	ENSGT00390000004405.b #26	ENSGT00950000185410	ENSGT00950000182892.a.b.a.a #27	ENSGT00940000154152.d.b #28	ENSGT00940000160113 #29	ENSGT00390000017856.b #30	ENSGT00940000159503 #31	ENSGT00940000155029.c.b #32	ENSGT00940000159774 #33	ENSGT00940000162072 #34	ENSGT00940000158354 #35	ENSGT00940000161108 #36
Mustelinae	ANCESTRAL SPECIES	2	ENSGT00860000135964 #7	ENSGT00930000153020	ENSGT00940000157982.b #9	ENSGT00940000156314 #10	ENSGT00940000160776 #11	ENSGT00390000012679 #12	ENSGT00940000155246 #13	ENSGT00550000074898 #14	ENSGT00940000153704.B #15	ENSGT00940000160397 #16	ENSGT00940000157439 #17	ENSGT00390000000603 #18	ENSGT00940000161315 #19	ENSGT00390000013474.b.a #20	ENSGT00940000161498 #21	ENSGT00940000159590 #22	ENSGT00390000011219 #23	ENSGT00940000154534.a #24	ENSGT00390000000713 #25	ENSGT00390000004405.b #26	ENSGT00950000185410	ENSGT00950000182892.a.b.a.a #27	ENSGT00940000154152.d.b #28	ENSGT00940000160113 #29	ENSGT00390000017856.b #30	ENSGT00940000159503 #31	ENSGT00940000155029.c.b #32	ENSGT00940000159774 #33	ENSGT00940000162072 #34	ENSGT00940000158354 #35	ENSGT00940000161108 #36
American mink	MODERN SPECIES	92	ENSNVIG00000005132 #7	ENSNVIG00000005143	ARHGAP23 (ENSNVIG00000005156) #9	SOCS7 (ENSNVIG00000005194) #10	GPR179 (ENSNVIG00000005217) #11	MRPL45 (ENSNVIG00000005287) #12	NPEPPS (ENSNVIG00000005313) #13	KPNB1 (ENSNVIG00000005359) #14	ENSNVIG00000005426 #15	TBX21 (ENSNVIG00000005442) #16	OSBPL7 (ENSNVIG00000005460) #17	RM10 (ENSNVIG00000005608) #18	LRRC46 (ENSNVIG00000005619) #19	SCRN2 (ENSNVIG00000005641) #20	SP6 (ENSNVIG00000005667) #21	SP2 (ENSNVIG00000005673) #22	PNPO (ENSNVIG00000005692) #23	PR15L (ENSNVIG00000005731) #24	CDK5RAP3 (ENSNVIG00000005742) #25	COPZ2 (ENSNVIG00000005837) #26	ENSNVIG00000005842	NFE2L1 (ENSNVIG00000005857) #27	CBX1 (ENSNVIG00000005946) #28	SNX11 (ENSNVIG00000005959) #29	SKAP1 (ENSNVIG00000005974) #30	ENSNVIG00000006009	HOXB1 (ENSNVIG00000006017) #31	HOXB2 (ENSNVIG00000006024) #32	HOXB3 (ENSNVIG00000006032) #33	HOXB4 (ENSNVIG00000006040) #34	HOXB5 (ENSNVIG00000006049) #35
Ferret	MODERN SPECIES	270	ARHGAP23 (ENSMPUG00000015145) #9	SOCS7 (ENSMPUG00000015192) #10	GPR179 (ENSMPUG00000015211) #11	MRPL45 (ENSMPUG00000015218) #12	NPEPPS (ENSMPUG00000015219) #13	KPNB1 (ENSMPUG00000015220) #14	TBKBP1 (ENSMPUG00000015271) #15	TBX21 (ENSMPUG00000015272) #16	ENSMPUG00000015273	ENSMPUG00000015275	OSBPL7 (ENSMPUG00000015276) #17	MRPL10 (ENSMPUG00000015278) #18	LRRC46 (ENSMPUG00000015287) #19	SCRN2 (ENSMPUG00000015288) #20	SP6 (ENSMPUG00000020086) #21	SP2 (ENSMPUG00000015289) #22	PNPO (ENSMPUG00000015290) #23	PRR15L (ENSMPUG00000020087) #24	CDK5RAP3 (ENSMPUG00000015291) #25	COPZ2 (ENSMPUG00000015292) #26	NFE2L1 (ENSMPUG00000015301) #27	CBX1 (ENSMPUG00000015302) ##28	SNX11 (ENSMPUG00000015303) #29	SKAP1 (ENSMPUG00000015305) #30	HOXB1 (ENSMPUG00000015307) #31	HOXB2 (ENSMPUG00000015309) #32	HOXB4 (ENSMPUG00000015310) #34	HOXB5 (ENSMPUG00000015316) #35	HOXB6 (ENSMPUG00000015322) #36	HOXB7 (ENSMPUG00000015328) #37	HOXB8 (ENSMPUG00000015329)
Ursidae	ANCESTRAL SPECIES	18	ENSGT00860000135964 #7	ENSGT00940000157961.C #8	ENSGT00940000157982.b #9	ENSGT00940000156314 #10	ENSGT00940000160776 #11	ENSGT00390000012679 #12	ENSGT00940000155246 #13	ENSGT00550000074898 #14	ENSGT00940000153704.B #15	ENSGT00940000160397 #16	ENSGT00940000157439 #17	ENSGT00390000000603 #18	ENSGT00940000161315 #19	ENSGT00390000013474.b.a #20	ENSGT00940000161498 #21	ENSGT00940000159590 #22	ENSGT00390000011219 #23	ENSGT00940000154534.a #24	ENSGT00390000000713 #25	ENSGT00390000004405.b #26	ENSGT00950000185410	ENSGT00950000182892.a.b.a.a #27	ENSGT00940000154152.d.b #28	ENSGT00940000160113 #29	ENSGT00390000017856.b #30	ENSGT00940000159503 #31	ENSGT00940000155029.c.b #32	ENSGT00940000159774 #33	ENSGT00940000162072 #34	ENSGT00940000158354 #35	ENSGT00940000161108 #36
Giant Panda	MODERN SPECIES	4	MLLT6 (ENSAMEG00000004398)	ENSAMEG00000004480 #7	SRCIN1 (ENSAMEG00000004436) #8	ARHGAP23 (ENSAMEG00000024032) #9	SOCS7 (ENSAMEG00000004494) #10	ENSAMEG00000029558 #11	ENSAMEG00000004511 #12	ENSAMEG00000004523 #13	KPNB1 (ENSAMEG00000004613) #14	TBKBP1 (ENSAMEG00000004659) #15	TBX21 (ENSAMEG00000004661) #16	OSBPL7 (ENSAMEG00000004670) #17	MRPL10 (ENSAMEG00000004722) #18	LRRC46 (ENSAMEG00000004734) #19	SCRN2 (ENSAMEG00000004751) #20	SP2 (ENSAMEG00000004772) #22	PNPO (ENSAMEG00000004786) #23	PRR15L (ENSAMEG00000025744) #24	CDK5RAP3 (ENSAMEG00000004818) #25	ENSAMEG00000030152	COPZ2 (ENSAMEG00000004850) #26	NFE2L1 (ENSAMEG00000004881) #27	CBX1 (ENSAMEG00000004890) #28	SNX11 (ENSAMEG00000004898) #29	SKAP1 (ENSAMEG00000004919) #30	HOXB1 (ENSAMEG00000004935) #31	HOXB2 (ENSAMEG00000030987) #32	HOXB3 (ENSAMEG00000027375) #33	HOXB4 (ENSAMEG00000028329) #34	HOXB5 (ENSAMEG00000004967) #35	HOXB6 (ENSAMEG00000004971) #36
Ursus	ANCESTRAL SPECIES	67		ENSGT00940000157982.b #9	ENSGT00940000156314 #10	ENSGT00940000160776 #11	ENSGT00390000012679 #12	ENSGT00940000155246 #13	ENSGT00390000005809.c.b	ENSGT00550000074898 #14	ENSGT00940000153704.B #15	ENSGT00940000160397 #16	ENSGT00940000157439 #17	ENSGT00390000000603 #18	ENSGT00940000161315 #19	ENSGT00390000013474.b.a #20	ENSGT00940000161498 #21	ENSGT00940000159590 #22	ENSGT00390000011219 #23	ENSGT00940000154534.a #24	ENSGT00390000000713 #25	ENSGT00390000004405.b #26	ENSGT00950000185410	ENSGT00950000182892.a.b.a.a #27	ENSGT00940000154152.d.b #28	ENSGT00940000160113 #29	ENSGT00390000017856.b #30	ENSGT00940000159503 #31	ENSGT00940000155029.c.b #32	ENSGT00940000159774 #33	ENSGT00940000162072 #34	ENSGT00940000158354 #35	ENSGT00940000161108 #36
American black bear	MODERN SPECIES	1414												MRPL10 (ENSUAMG00000017142) #18	LRRC46 (ENSUAMG00000017138) #19	SCRN2 (ENSUAMG00000017135) #20	SP6 (ENSUAMG00000017132) #21	SP2 (ENSUAMG00000017127) #22	PNPO (ENSUAMG00000017122) #23	PRR15L (ENSUAMG00000017119) #24	CDK5RAP3 (ENSUAMG00000017117) #25	COPZ2 (ENSUAMG00000017115) #26	ENSUAMG00000017113	NFE2L1 (ENSUAMG00000017111) #27	CBX1 (ENSUAMG00000017105) #28	SNX11 (ENSUAMG00000017102) #29
Polar bear	MODERN SPECIES	94			ARHGAP23 (ENSUMAG00000016886) #9	SOCS7 (ENSUMAG00000016879) #10	ENSUMAG00000016874 #11	MRPL45 (ENSUMAG00000016869) #12	NPEPPS (ENSUMAG00000016765) #13	ENSUMAG00000016745	KPNB1 (ENSUMAG00000016471) #14	ENSUMAG00000016425 #15	ENSUMAG00000016418 #16	OSBPL7 (ENSUMAG00000016080) #17	MRPL10 (ENSUMAG00000016024) #18	LRRC46 (ENSUMAG00000016015) #19	SCRN2 (ENSUMAG00000016006) #20	SP2 (ENSUMAG00000015996) #22	PNPO (ENSUMAG00000015992) #23	PRR15L (ENSUMAG00000015982) #24	ENSUMAG00000015972 #25	ENSUMAG00000015965 #25	ENSUMAG00000015942 #26	NFE2L1 (ENSUMAG00000015890) #27	CBX1 (ENSUMAG00000015878) #28	SNX11 (ENSUMAG00000015873) #29	SKAP1 (ENSUMAG00000015835) #30	HOXB1 (ENSUMAG00000015821) #31	HOXB5 (ENSUMAG00000015806) #35	HOXB7 (ENSUMAG00000015795) #37	ENSUMAG00000015785	TTLL6 (ENSUMAG00000015764)	CALCOCO2 (ENSUMAG00000015754)
Eulipotyphla	ANCESTRAL SPECIES	628																ENSGT00940000159590 #22	ENSGT00390000011219 #23	ENSGT00940000154534.a #24
Hedgehog	MODERN SPECIES	6186																SP2 (ENSEEUG00000014248) #22	ENSEEUG00000014320 #23	PRR15L (ENSEEUG00000014410) #24
Common shrew	MODERN SPECIES	4826																SP2 (ENSSARG00000003559) #22	CDK5RAP3 (ENSSARG00000003586) #25
Euarchontoglires	ANCESTRAL SPECIES	4	ENSGT00940000157961.C #8	ENSGT00860000135964 #7	ENSGT00940000157982.b #9	ENSGT00940000156314 #10	ENSGT00940000160776 #11	ENSGT00390000012679 #12	ENSGT00940000155246 #13	ENSGT00550000074898 #14	ENSGT00940000153704.B #15	ENSGT00940000160397 #16	ENSGT00940000157439 #17	ENSGT00390000000603 #18	ENSGT00940000161315 #19	ENSGT00390000013474.b.a #20	ENSGT00940000161498 #21	ENSGT00940000159590 #22	ENSGT00390000011219 #23	ENSGT00940000154534.a #24	ENSGT00390000000713 #25	ENSGT00950000185410	ENSGT00390000004405.b #26	ENSGT00950000182892.a.b.a.a #27	ENSGT00940000154152.d.b #28	ENSGT00940000160113 #29	ENSGT00390000017856.b #30	ENSGT00940000159503 #31	ENSGT00940000155029.c.b #32	ENSGT00940000159774 #33	ENSGT00980000199681	ENSGT00940000162072 #34	ENSGT00940000158354 #35
Primates	ANCESTRAL SPECIES	3	ENSGT00940000157961.C #8	ENSGT00860000135964 #7	ENSGT00940000157982.b #9	ENSGT00940000156314 #10	ENSGT00940000160776 #11	ENSGT00390000012679 #12	ENSGT00940000155246 #13	ENSGT00550000074898 #14	ENSGT00940000153704.B #15	ENSGT00940000160397 #16	ENSGT00940000157439 #17	ENSGT00390000000603 #18	ENSGT00940000161315 #19	ENSGT00390000013474.b.a #20	ENSGT00940000161498 #21	ENSGT00940000159590 #22	ENSGT00390000011219 #23	ENSGT00940000154534.a #24	ENSGT00390000000713 #25	ENSGT00950000185410	ENSGT00390000004405.b #26	ENSGT00950000182892.a.b.a.a #27	ENSGT00940000154152.d.b #28	ENSGT00940000160113 #29	ENSGT00390000017856.b #30	ENSGT00940000159503 #31	ENSGT00940000155029.c.b #32	ENSGT00940000159774 #33	ENSGT00980000199681	ENSGT00940000162072 #34	ENSGT00940000158354 #35
Strepsirrhini	DUPLICATION
Strepsirrhini	ANCESTRAL SPECIES																	ENSGT00940000159590.g #22
Lemuriformes	ANCESTRAL SPECIES																	ENSGT00940000159590.g #22
Lemuriformes_a	ANCESTRAL SPECIES																	ENSGT00940000159590.g #22
Greater bamboo lemur	DUPLICATION
Greater bamboo lemur	MODERN SPECIES	2232																ENSPSMG00000003078 #22
Greater bamboo lemur	MODERN SPECIES	107	ENSPSMG00000008308 #7	SRCIN1 (ENSPSMG00000008297) #8	ARHGAP23 (ENSPSMG00000008194) #9	SOCS7 (ENSPSMG00000008100) #10	GPR179 (ENSPSMG00000008075) #11	MRPL45 (ENSPSMG00000008060) #12	NPEPPS (ENSPSMG00000007984) #13	KPNB1 (ENSPSMG00000007848) #14	TBKBP1 (ENSPSMG00000007810) #15	TBX21 (ENSPSMG00000007791) #16	OSBPL7 (ENSPSMG00000007730) #17	MRPL10 (ENSPSMG00000007514) #18	LRRC46 (ENSPSMG00000007500) #19	SCRN2 (ENSPSMG00000007491) #20	SP6 (ENSPSMG00000007463) #21	ENSPSMG00000007462 #22	SP2 (ENSPSMG00000007456) #22	PNPO (ENSPSMG00000007445) #23	PRR15L (ENSPSMG00000007406) #24	ENSPSMG00000007395 #25	ENSPSMG00000007342	ENSPSMG00000007339 #26	NFE2L1 (ENSPSMG00000007285) #27
Strepsirrhini	ANCESTRAL SPECIES	4	ENSGT00860000135964 #7	ENSGT00940000157961.C #8	ENSGT00940000157982.b #9	ENSGT00940000156314 #10	ENSGT00940000160776 #11	ENSGT00390000012679 #12	ENSGT00940000155246 #13	ENSGT00550000074898 #14	ENSGT00940000153704.B #15	ENSGT00940000160397 #16	ENSGT00940000157439 #17	ENSGT00390000000603 #18	ENSGT00940000161315 #19	ENSGT00390000013474.b.a #20	ENSGT00940000161498 #21	ENSGT00940000159590.h #22	ENSGT00390000011219 #23	ENSGT00940000154534.a #24	ENSGT00390000000713 #25	ENSGT00950000185410	ENSGT00390000004405.b #26	ENSGT00950000182892.a.b.a.a #27	ENSGT00940000154152.d.b #28	ENSGT00940000160113 #29	ENSGT00390000017856.b #30	ENSGT00940000159503 #31	ENSGT00940000155029.c.b #32	ENSGT00940000159774 #33	ENSGT00940000162072 #34	ENSGT00940000158354 #35	ENSGT00940000161108 #36
Lemuriformes	ANCESTRAL SPECIES	2	ENSGT00860000135964 #7	ENSGT00940000157961.C #8	ENSGT00940000157982.b #9	ENSGT00940000156314 #10	ENSGT00940000160776 #11	ENSGT00390000012679 #12	ENSGT00940000155246 #13	ENSGT00550000074898 #14	ENSGT00940000153704.B #15	ENSGT00940000160397 #16	ENSGT00940000157439 #17	ENSGT00390000000603 #18	ENSGT00940000161315 #19	ENSGT00390000013474.b.a #20	ENSGT00940000161498 #21	ENSGT00940000159590.h #22	ENSGT00390000011219 #23	ENSGT00940000154534.a #24	ENSGT00390000000713 #25	ENSGT00950000185410	ENSGT00390000004405.b #26	ENSGT00950000182892.a.b.a.a #27	ENSGT00940000154152.d.b #28	ENSGT00940000160113 #29	ENSGT00390000017856.b #30	ENSGT00940000159503 #31	ENSGT00940000155029.c.b #32	ENSGT00940000159774 #33	ENSGT00940000162072 #34	ENSGT00940000158354 #35	ENSGT00940000161108 #36
Mouse lemur	MODERN SPECIES	7	MLLT6 (ENSMICG00000002976)	SRCIN1 (ENSMICG00000000639) #8	ARHGAP23 (ENSMICG00000000638) #9	SOCS7 (ENSMICG00000000636) #10	GPR179 (ENSMICG00000000628) #11	MRPL45 (ENSMICG00000000626) #12	NPEPPS (ENSMICG00000012034) #13	KPNB1 (ENSMICG00000012059) #14	TBKBP1 (ENSMICG00000012069) #15	TBX21 (ENSMICG00000035345) #16	OSBPL7 (ENSMICG00000004799) #17	MRPL10 (ENSMICG00000048091) #18	LRRC46 (ENSMICG00000004816) #19	SCRN2 (ENSMICG00000004823) #20	SP6 (ENSMICG00000047695) #21	SP2 (ENSMICG00000036051) #22	ENSMICG00000014065 #23	CDK5RAP3 (ENSMICG00000014077) #25	COPZ2 (ENSMICG00000014097) #26	ENSMICG00000009510 #28	NFE2L1 (ENSMICG00000014716) #27	SNX11 (ENSMICG00000014741) #29	ENSMICG00000029923	SKAP1 (ENSMICG00000047158) #30	HOXB1 (ENSMICG00000048152) #31	HOXB2 (ENSMICG00000038222) #32	HOXB3 (ENSMICG00000007522) #33	HOXB4 (ENSMICG00000043173) #34	HOXB5 (ENSMICG00000047139) #35	HOXB6 (ENSMICG00000042216) #36	HOXB7 (ENSMICG00000007539) #37
Lemuriformes_a	ANCESTRAL SPECIES		ENSGT00860000135964 #7	ENSGT00940000157961.C #8	ENSGT00940000157982.b #9	ENSGT00940000156314 #10	ENSGT00940000160776 #11	ENSGT00390000012679 #12	ENSGT00940000155246 #13	ENSGT00550000074898 #14	ENSGT00940000153704.B #15	ENSGT00940000160397 #16	ENSGT00940000157439 #17	ENSGT00390000000603 #18	ENSGT00940000161315 #19	ENSGT00390000013474.b.a #20	ENSGT00940000161498 #21	ENSGT00940000159590.h #22	ENSGT00390000011219 #23	ENSGT00940000154534.a #24	ENSGT00390000000713 #25	ENSGT00950000185410	ENSGT00390000004405.b #26	ENSGT00950000182892.a.b.a.a #27	ENSGT00940000154152.d.b #28	ENSGT00940000160113 #29	ENSGT00390000017856.b #30	ENSGT00940000159503 #31	ENSGT00940000155029.c.b #32	ENSGT00940000159774 #33	ENSGT00940000162072 #34	ENSGT00940000158354 #35	ENSGT00940000161108 #36
Coquerels sifaka	MODERN SPECIES	120	SRCIN1 (ENSPCOG00000008761) #8	ARHGAP23 (ENSPCOG00000013530) #9	SOCS7 (ENSPCOG00000023874) #10	GPR179 (ENSPCOG00000007958) #11	MRPL45 (ENSPCOG00000014660) #12	ENSPCOG00000027158 #13	ENSPCOG00000014331 #13	KPNB1 (ENSPCOG00000026259) #14	TBKBP1 (ENSPCOG00000026427) #15	TBX21 (ENSPCOG00000014387) #16	OSBPL7 (ENSPCOG00000019714) #17	MRPL10 (ENSPCOG00000025492) #18	LRRC46 (ENSPCOG00000015829) #19	SCRN2 (ENSPCOG00000014438) #20	SP6 (ENSPCOG00000008529) #21	SP2 (ENSPCOG00000017198) #22	PNPO (ENSPCOG00000017906) #23	CDK5RAP3 (ENSPCOG00000016598) #25	COPZ2 (ENSPCOG00000018359) #26	NFE2L1 (ENSPCOG00000021740) #27	ENSPCOG00000010902 #28	SNX11 (ENSPCOG00000011015) #29	SKAP1 (ENSPCOG00000022221) #30	HOXB1 (ENSPCOG00000025930) #31	HOXB2 (ENSPCOG00000017380) #32	HOXB3 (ENSPCOG00000020113) #33	HOXB4 (ENSPCOG00000022963) #34	HOXB5 (ENSPCOG00000015692) #35	HOXB6 (ENSPCOG00000019931) #36	HOXB7 (ENSPCOG00000028248) #37	HOXB8 (ENSPCOG00000024853)
Greater bamboo lemur	MODERN SPECIES	107	SRCIN1 (ENSPSMG00000008297) #8	ARHGAP23 (ENSPSMG00000008194) #9	SOCS7 (ENSPSMG00000008100) #10	GPR179 (ENSPSMG00000008075) #11	MRPL45 (ENSPSMG00000008060) #12	NPEPPS (ENSPSMG00000007984) #13	KPNB1 (ENSPSMG00000007848) #14	TBKBP1 (ENSPSMG00000007810) #15	TBX21 (ENSPSMG00000007791) #16	OSBPL7 (ENSPSMG00000007730) #17	MRPL10 (ENSPSMG00000007514) #18	LRRC46 (ENSPSMG00000007500) #19	SCRN2 (ENSPSMG00000007491) #20	SP6 (ENSPSMG00000007463) #21	ENSPSMG00000007462 #22	SP2 (ENSPSMG00000007456) #22	PNPO (ENSPSMG00000007445) #23	PRR15L (ENSPSMG00000007406) #24	ENSPSMG00000007395 #25	ENSPSMG00000007342	ENSPSMG00000007339 #26	NFE2L1 (ENSPSMG00000007285) #27
Bushbaby	MODERN SPECIES	133	EPOP (ENSOGAG00000030366)	SRCIN1 (ENSOGAG00000009948) #8	ARHGAP23 (ENSOGAG00000030856) #9	SOCS7 (ENSOGAG00000012422) #10	GPR179 (ENSOGAG00000031431) #11	MRPL45 (ENSOGAG00000015816) #12	NPEPPS (ENSOGAG00000006365) #13	KPNB1 (ENSOGAG00000006153) #14	TBKBP1 (ENSOGAG00000032523) #15	TBX21 (ENSOGAG00000006160) #16	OSBPL7 (ENSOGAG00000006166) #17	MRPL10 (ENSOGAG00000006173) #18	LRRC46 (ENSOGAG00000006177) #19	SCRN2 (ENSOGAG00000006181) #20	SP6 (ENSOGAG00000030282) #21	SP2 (ENSOGAG00000030380) #22	PNPO (ENSOGAG00000006186) #23	PRR15L (ENSOGAG00000006187) #24	CDK5RAP3 (ENSOGAG00000004951) #25	COPZ2 (ENSOGAG00000004954) #26	NFE2L1 (ENSOGAG00000025191) #27	CBX1 (ENSOGAG00000005658) #28	SNX11 (ENSOGAG00000015854) #29	SKAP1 (ENSOGAG00000015855) #30	HOXB1 (ENSOGAG00000031645) #31	HOXB2 (ENSOGAG00000029280) #32	HOXB3 (ENSOGAG00000032090) #33	HOXB4 (ENSOGAG00000033709) #34	HOXB5 (ENSOGAG00000032432) #35	HOXB6 (ENSOGAG00000008661) #36	HOXB7 (ENSOGAG00000008667) #37
Haplorrhini	ANCESTRAL SPECIES	6	ENSGT00940000157961.C #8	ENSGT00860000135964 #7	ENSGT00940000157982.b #9	ENSGT00940000156314 #10	ENSGT00940000160776 #11	ENSGT00390000012679 #12	ENSGT00940000155246 #13	ENSGT00550000074898 #14	ENSGT00940000153704.B #15	ENSGT00940000160397 #16	ENSGT00940000157439 #17	ENSGT00390000000603 #18	ENSGT00940000161315 #19	ENSGT00390000013474.b.a #20	ENSGT00940000161498 #21	ENSGT00940000159590 #22	ENSGT00390000011219 #23	ENSGT00940000154534.a #24	ENSGT00390000000713 #25	ENSGT00390000004405.b #26	ENSGT00950000182892.a.b.a.a #27	ENSGT00940000154152.d.b #28	ENSGT00940000160113 #29	ENSGT00390000017856.b #30	ENSGT00940000159503 #31	ENSGT00940000155029.c.b #32	ENSGT00940000159774 #33	ENSGT00980000199681	ENSGT00940000162072 #34	ENSGT00940000158354 #35	ENSGT00940000161108 #36
Tarsier	MODERN SPECIES	7208											OSBPL7 (ENSTSYG00000014378) #17	MRPL10 (ENSTSYG00000034759) #18	LRRC46 (ENSTSYG00000003710) #19	SCRN2 (ENSTSYG00000003730) #20	SP6 (ENSTSYG00000031192) #21	SP2 (ENSTSYG00000013766) #22	PNPO (ENSTSYG00000002012) #23	CDK5RAP3 (ENSTSYG00000010313) #25	COPZ2 (ENSTSYG00000030074) #26	NFE2L1 (ENSTSYG00000011468) #27	CBX1 (ENSTSYG00000034806) #28	SNX11 (ENSTSYG00000035487) #29	SKAP1 (ENSTSYG00000008218) #30
Simiiformes	ANCESTRAL SPECIES	7	ENSGT00940000157961.C #8	ENSGT00860000135964 #7	ENSGT00940000157982.b #9	ENSGT00940000156314 #10	ENSGT00940000160776 #11	ENSGT00390000012679 #12	ENSGT00940000155246 #13	ENSGT00550000074898 #14	ENSGT00940000153704.B #15	ENSGT00940000160397 #16	ENSGT00940000157439 #17	ENSGT00390000000603 #18	ENSGT00940000161315 #19	ENSGT00390000013474.b.a #20	ENSGT00940000161498 #21	ENSGT00940000159590 #22	ENSGT00390000011219 #23	ENSGT00940000154534.a #24	ENSGT00390000000713 #25	ENSGT00390000004405.b #26	ENSGT00950000182892.a.b.a.a #27	ENSGT00940000154152.d.b #28	ENSGT00940000160113 #29	ENSGT00390000017856.b #30	ENSGT00940000159503 #31	ENSGT00940000155029.c.b #32	ENSGT00940000159774 #33	ENSGT00940000162072 #34	ENSGT00940000158354 #35	ENSGT00940000161108 #36	ENSGT00940000161230 #37
Platyrrhini	ANCESTRAL SPECIES	1	ENSGT00860000135964 #7	ENSGT00940000157982.b #9	ENSGT00940000156314 #10	ENSGT00940000160776 #11	ENSGT00390000012679 #12	ENSGT00940000155246 #13	ENSGT00550000074898.b #14	ENSGT00550000074898.a #14	ENSGT00940000153704.B #15	ENSGT00940000160397 #16	ENSGT00940000157439 #17	ENSGT00390000000603 #18	ENSGT00940000161315 #19	ENSGT00390000013474.b.a #20	ENSGT00940000161498 #21	ENSGT00940000159590 #22	ENSGT00390000011219 #23	ENSGT00940000154534.a #24	ENSGT00390000000713 #25	ENSGT00390000004405.b #26	ENSGT00950000182892.a.b.a.a #27	ENSGT00940000154152.d.b #28	ENSGT00940000160113 #29	ENSGT00390000017856.b #30	ENSGT00940000159503 #31	ENSGT00940000155029.c.b #32	ENSGT00940000159774 #33	ENSGT00940000162072 #34	ENSGT00940000158354 #35	ENSGT00940000161108 #36	ENSGT00940000161230 #37
Cebidae	ANCESTRAL SPECIES	10	ENSGT00860000135964 #7	ENSGT00940000157982.b #9	ENSGT00940000156314 #10	ENSGT00940000160776 #11	ENSGT00390000012679 #12	ENSGT00940000155246 #13	ENSGT00550000074898.b #14	ENSGT00550000074898.a #14	ENSGT00940000153704.B #15	ENSGT00940000160397 #16	ENSGT00940000157439 #17	ENSGT00390000000603 #18	ENSGT00940000161315 #19	ENSGT00390000013474.b.a #20	ENSGT00940000161498 #21	ENSGT00940000159590 #22	ENSGT00390000011219 #23	ENSGT00940000154534.a #24	ENSGT00390000000713 #25	ENSGT00390000004405.b #26	ENSGT00950000182892.a.b.a.a #27	ENSGT00940000154152.d.b #28	ENSGT00940000160113 #29	ENSGT00390000017856.b #30	ENSGT00940000154172.gb.b.b.b	ENSGT00940000159503 #31	ENSGT00940000155029.c.b #32	ENSGT00940000159774 #33	ENSGT00940000162072 #34	ENSGT00940000158354 #35	ENSGT00940000161108 #36
Cebidae_a	ANCESTRAL SPECIES	1	ENSGT00860000135964 #7	ENSGT00940000157982.b #9	ENSGT00940000156314 #10	ENSGT00940000160776 #11	ENSGT00390000012679 #12	ENSGT00940000155246 #13	ENSGT00550000074898.b #14	ENSGT00550000074898.a #14	ENSGT00940000153704.B #15	ENSGT00940000160397 #16	ENSGT00940000157439 #17	ENSGT00390000000603 #18	ENSGT00940000161315 #19	ENSGT00390000013474.b.a #20	ENSGT00940000161498 #21	ENSGT00940000159590 #22	ENSGT00390000011219 #23	ENSGT00940000154534.a #24	ENSGT00390000000713 #25	ENSGT00390000004405.b #26	ENSGT00950000182892.a.b.a.a #27	ENSGT00940000154152.d.b #28	ENSGT00940000160113 #29	ENSGT00390000017856.b #30	ENSGT00940000154172.gb.b.b.b	ENSGT00940000159503 #31	ENSGT00940000155029.c.b #32	ENSGT00940000159774 #33	ENSGT00940000162072 #34	ENSGT00940000158354 #35	ENSGT00940000161108 #36
Capuchin	MODERN SPECIES	228	ENSCCAG00000023743 #7	SRCIN1 (ENSCCAG00000029783) #8	ARHGAP23 (ENSCCAG00000025162) #9	SOCS7 (ENSCCAG00000033044) #10	GPR179 (ENSCCAG00000037056) #11	MRPL45 (ENSCCAG00000034579) #12	NPEPPS (ENSCCAG00000035472) #13	ENSCCAG00000029263 #14	TBKBP1 (ENSCCAG00000026129) #15	TBX21 (ENSCCAG00000026112) #16	OSBPL7 (ENSCCAG00000034097) #17	MRPL10 (ENSCCAG00000023150) #18	LRRC46 (ENSCCAG00000030568) #19	SCRN2 (ENSCCAG00000031435) #20	SP6 (ENSCCAG00000020330) #21	SP2 (ENSCCAG00000038047) #22	PNPO (ENSCCAG00000029175) #23	CDK5RAP3 (ENSCCAG00000038053) #25	COPZ2 (ENSCCAG00000021292) #26	NFE2L1 (ENSCCAG00000029090) #27	CBX1 (ENSCCAG00000025085) #28	SNX11 (ENSCCAG00000030167) #29	SKAP1 (ENSCCAG00000035663) #30	ENSCCAG00000019181	HOXB1 (ENSCCAG00000027667) #31	HOXB2 (ENSCCAG00000024035) #32	HOXB3 (ENSCCAG00000013598) #33	HOXB4 (ENSCCAG00000020311) #34	HOXB5 (ENSCCAG00000036867) #35	HOXB6 (ENSCCAG00000022842) #36	HOXB8 (ENSCCAG00000026051)
Bolivian squirrel monkey	MODERN SPECIES	86	ENSSBOG00000020882 #7	ARHGAP23 (ENSSBOG00000017157) #9	SOCS7 (ENSSBOG00000031544) #10	GPR179 (ENSSBOG00000022698) #11	MRPL45 (ENSSBOG00000028242) #12	NPEPPS (ENSSBOG00000032725) #13	KPNB1 (ENSSBOG00000030025) #14	ENSSBOG00000014766	ENSSBOG00000029189 #15	TBX21 (ENSSBOG00000028744) #16	OSBPL7 (ENSSBOG00000033435) #17	MRPL10 (ENSSBOG00000004214) #18	LRRC46 (ENSSBOG00000026980) #19	SCRN2 (ENSSBOG00000027391) #20	SP6 (ENSSBOG00000014210) #21	SP2 (ENSSBOG00000029098) #22	PNPO (ENSSBOG00000021213) #23	PRR15L (ENSSBOG00000019240) #24	CDK5RAP3 (ENSSBOG00000033272) #25	COPZ2 (ENSSBOG00000033633) #26	NFE2L1 (ENSSBOG00000023867) #27	ENSSBOG00000031880 ##28	SNX11 (ENSSBOG00000026967) #29	SKAP1 (ENSSBOG00000029434) #30	ENSSBOG00000019520	HOXB1 (ENSSBOG00000034875) #31	HOXB2 (ENSSBOG00000025070) #32	HOXB3 (ENSSBOG00000030844) #33	HOXB4 (ENSSBOG00000024432) #34	HOXB5 (ENSSBOG00000018198) #35	HOXB6 (ENSSBOG00000031900) #36
Marmoset	MODERN SPECIES	17	ARHGAP23 (ENSCJAG00000008112) #9	ENSCJAG00000008111	SOCS7 (ENSCJAG00000008108) #10	GPR179 (ENSCJAG00000008100) #11	MRPL45 (ENSCJAG00000008080) #12	ENSCJAG00000048573	NPEPPS (ENSCJAG00000007985) #13	KPNB1 (ENSCJAG00000007834) #14	TBKBP1 (ENSCJAG00000045710) #15	TBX21 (ENSCJAG00000007796) #16	OSBPL7 (ENSCJAG00000007585) #17	MRPL10 (ENSCJAG00000007787) #18	LRRC46 (ENSCJAG00000007776) #19	SCRN2 (ENSCJAG00000047705) #20	SP6 (ENSCJAG00000043946) #21	SP2 (ENSCJAG00000007713) #22	PNPO (ENSCJAG00000007693) #23	PRR15L (ENSCJAG00000044487) #24	CDK5RAP3 (ENSCJAG00000007669) #25	COPZ2 (ENSCJAG00000007567) #26	ENSCJAG00000058197	NFE2L1 (ENSCJAG00000007542) #27	CBX1 (ENSCJAG00000042052) #28	SNX11 (ENSCJAG00000039549) #29	SKAP1 (ENSCJAG00000007504) #30	ENSCJAG00000038853	HOXB1 (ENSCJAG00000007496) #31	HOXB2 (ENSCJAG00000007494) #32	HOXB3 (ENSCJAG00000007487) #33	HOXB4 (ENSCJAG00000007480) #34	HOXB5 (ENSCJAG00000007472) #35
Mas night monkey	MODERN SPECIES	481	ENSANAG00000022130 #7	ARHGAP23 (ENSANAG00000026348) #9	SOCS7 (ENSANAG00000028278) #10	GPR179 (ENSANAG00000033667) #11	MRPL45 (ENSANAG00000028167) #12	NPEPPS (ENSANAG00000028371) #13	ENSANAG00000019395	ENSANAG00000024932 #14	TBKBP1 (ENSANAG00000020710) #15	TBX21 (ENSANAG00000037999) #16	OSBPL7 (ENSANAG00000021406) #17	MRPL10 (ENSANAG00000022792) #18	LRRC46 (ENSANAG00000028496) #19	SCRN2 (ENSANAG00000021482) #20	SP6 (ENSANAG00000019338) #21	SP2 (ENSANAG00000032738) #22	PNPO (ENSANAG00000026080) #23	CDK5RAP3 (ENSANAG00000021880) #25	COPZ2 (ENSANAG00000023309) #26	NFE2L1 (ENSANAG00000027606) #27	ENSANAG00000036853 ##28	SNX11 (ENSANAG00000022588) #29	SKAP1 (ENSANAG00000026853) #30	ENSANAG00000023400	HOXB1 (ENSANAG00000032306) #31	HOXB2 (ENSANAG00000023626) #32	HOXB3 (ENSANAG00000032072) #33	HOXB4 (ENSANAG00000024005) #34	HOXB5 (ENSANAG00000024299) #35	HOXB6 (ENSANAG00000023964) #36	HOXB7 (ENSANAG00000025513) #37
Catarrhini	ANCESTRAL SPECIES	8	ENSGT00940000157961.C #8	ENSGT00860000135964 #7	ENSGT00940000157982.b #9	ENSGT00940000156314 #10	ENSGT00940000160776 #11	ENSGT00390000012679 #12	ENSGT00940000155246 #13	ENSGT00550000074898 #14	ENSGT00940000153704.B #15	ENSGT00940000160397 #16	ENSGT00940000157439 #17	ENSGT00390000000603.b #18	ENSGT00940000161315 #19	ENSGT00390000013474.b.a #20	ENSGT00940000161498 #21	ENSGT00940000159590 #22	ENSGT00390000011219 #23	ENSGT00940000154534.a #24	ENSGT00390000000713 #25	ENSGT00390000004405.b #26	ENSGT00950000182892.a.b.a.a #27	ENSGT00940000154152.d.b #28	ENSGT00940000160113 #29	ENSGT00390000017856.b #30	ENSGT00940000159503 #31	ENSGT00940000155029.c.b #32	ENSGT00940000159774 #33	ENSGT00940000162072 #34	ENSGT00940000158354 #35	ENSGT00940000161108 #36	ENSGT00940000161230 #37
Hominoidea	ANCESTRAL SPECIES	13	ENSGT00860000135964 #7	ENSGT00940000157982.b #9	ENSGT00940000156314 #10	ENSGT00940000160776 #11	ENSGT00390000012679 #12	ENSGT00940000155246.j.b.b #13	ENSGT00940000155246.i #13	ENSGT00550000074898 #14	ENSGT00940000153704.B #15	ENSGT00940000160397 #16	ENSGT00940000157439 #17	ENSGT00390000000603.b #18	ENSGT00940000161315 #19	ENSGT00390000013474.b.a #20	ENSGT00940000161498 #21	ENSGT00940000159590 #22	ENSGT00390000011219 #23	ENSGT00940000154534.a #24	ENSGT00390000000713.h.b #25	ENSGT00390000004405.b #26	ENSGT00950000182892.a.b.a.a #27	ENSGT00940000154152.d.b #28	ENSGT00940000160113 #29	ENSGT00390000017856.b #30	ENSGT00940000159503 #31	ENSGT00940000155029.c.b #32	ENSGT00940000159774 #33	ENSGT00940000162072 #34	ENSGT00940000158354 #35	ENSGT00940000161108 #36	ENSGT00940000161230 #37
Hominidae	ANCESTRAL SPECIES	16	ENSGT00860000135964 #7	ENSGT00940000157982.b #9	ENSGT00940000156314 #10	ENSGT00940000160776 #11	ENSGT00390000012679 #12	ENSGT00940000155246.j.b.b #13	ENSGT00940000155246.i #13	ENSGT00550000074898 #14	ENSGT00940000153704.B #15	ENSGT00940000160397 #16	ENSGT00940000157439 #17	ENSGT00390000000603.b #18	ENSGT00940000161315 #19	ENSGT00390000013474.b.a #20	ENSGT00940000161498 #21	ENSGT00940000159590 #22	ENSGT00390000011219 #23	ENSGT00940000154534.a #24	ENSGT00390000000713.h.a #25	ENSGT00390000004405.b #26	ENSGT00950000182892.a.b.a.a #27	ENSGT00940000154152.d.b #28	ENSGT00940000160113 #29	ENSGT00390000017856.b #30	ENSGT00940000159503 #31	ENSGT00940000155029.c.b #32	ENSGT00940000159774 #33	ENSGT00940000162072 #34	ENSGT00940000158354 #35	ENSGT00940000161108 #36	ENSGT00940000161230 #37
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	1	ENSGT00530000063282.t.h.a.b.d	ENSGT00940000155111.h	ENSGT00950000182950.C.a.a	ENSGT01030000234570.d.b.a.b.a	ENSGT01090000259987.b.b.a.a.b	ENSGT00390000004027	ENSGT00940000155246.j.b.a #13	ENSGT00550000074898 #14	ENSGT00940000153704.B #15	ENSGT00940000160397 #16	ENSGT00940000157439 #17	ENSGT00390000000603.b #18	ENSGT00940000161315 #19	ENSGT00390000013474.b.a #20	ENSGT00940000161498 #21	ENSGT00940000159590 #22	ENSGT00390000011219 #23	ENSGT00940000154534.a #24	ENSGT00390000000713.h.a.a.b #25	ENSGT00390000004405.b #26	ENSGT00950000182892.a.b.a.a #27	ENSGT00940000154152.d.b #28	ENSGT00940000160113 #29	ENSGT00390000017856.b #30	ENSGT00940000159503 #31	ENSGT00940000155029.c.b #32	ENSGT00940000159774 #33	ENSGT00940000162072 #34	ENSGT00940000158354 #35	ENSGT00940000161108 #36	ENSGT00940000161230 #37
Homo/Pan group	ANCESTRAL SPECIES	2	ENSGT00530000063282.t.h.a.b.d	ENSGT00950000182950.C.a.a	ENSGT00950000182950.C.a.b.a	ENSGT01030000234570.d.b.a.b.a	ENSGT01090000259987.b.b.a.a.b	ENSGT00390000004027	ENSGT00940000155246.j.b.a #13	ENSGT00550000074898 #14	ENSGT00940000153704.B #15	ENSGT00940000160397 #16	ENSGT00940000157439 #17	ENSGT00390000000603.b #18	ENSGT00940000161315 #19	ENSGT00390000013474.b.a #20	ENSGT00940000161498 #21	ENSGT00940000159590 #22	ENSGT00390000011219 #23	ENSGT00940000154534.a #24	ENSGT00390000000713.h.a.a.b #25	ENSGT00390000004405.b #26	ENSGT00950000182892.a.b.a.a #27	ENSGT00940000154152.d.b #28	ENSGT00940000160113 #29	ENSGT00390000017856.b #30	ENSGT00940000159503 #31	ENSGT00940000155029.c.b #32	ENSGT00940000159774 #33	ENSGT00940000162072 #34	ENSGT00940000158354 #35	ENSGT00940000161108 #36	ENSGT00940000161230 #37
Pan	ANCESTRAL SPECIES	3	ENSGT00530000063282.t.h.a.b.d	ENSGT00950000182950.C.a.a	ENSGT01030000234570.d.b.a.b.a	ENSGT01090000259987.b.b.a.a.b	ENSGT00390000004027	ENSGT00940000153464.A.b.b	ENSGT00940000155246.j.b.a #13	ENSGT00550000074898 #14	ENSGT00940000153704.B #15	ENSGT00940000160397 #16	ENSGT00940000157439 #17	ENSGT00390000000603.b #18	ENSGT00940000161315 #19	ENSGT00390000013474.b.a #20	ENSGT00940000161498 #21	ENSGT00940000159590 #22	ENSGT00390000011219 #23	ENSGT00940000154534.a #24	ENSGT00390000000713.h.a.a.b #25	ENSGT00390000004405.b #26	ENSGT00950000182892.a.b.a.a #27	ENSGT00940000154152.d.b #28	ENSGT00940000160113 #29	ENSGT00390000017856.b #30	ENSGT00940000159503 #31	ENSGT00940000155029.c.b #32	ENSGT00940000159774 #33	ENSGT00940000162072 #34	ENSGT00940000158354 #35	ENSGT00940000161108 #36	ENSGT00940000161230 #37
Bonobo	MODERN SPECIES	8	CDC27 (ENSPPAG00000035989)	MYL4 (ENSPPAG00000032176)	ITGB3 (ENSPPAG00000030328)	ENSPPAG00000019537	ENSPPAG00000041328	ENSPPAG00000031240	ENSPPAG00000041383 #13	KPNB1 (ENSPPAG00000028842) #14	ENSPPAG00000040088 #15	TBX21 (ENSPPAG00000033988) #16	OSBPL7 (ENSPPAG00000027887) #17	MRPL10 (ENSPPAG00000034452) #18	LRRC46 (ENSPPAG00000038983) #19	SCRN2 (ENSPPAG00000028214) #20	SP6 (ENSPPAG00000026169) #21	SP2 (ENSPPAG00000027065) #22	PNPO (ENSPPAG00000038148) #23	PRR15L (ENSPPAG00000003316) #24	ENSPPAG00000029145 #25	COPZ2 (ENSPPAG00000043351) #26	NFE2L1 (ENSPPAG00000031737) #27	ENSPPAG00000030413 #28	SNX11 (ENSPPAG00000033185) #29	SKAP1 (ENSPPAG00000039277) #30	HOXB1 (ENSPPAG00000039129) #31	HOXB2 (ENSPPAG00000027417) #32	HOXB3 (ENSPPAG00000032630) #33	HOXB4 (ENSPPAG00000040659) #34	HOXB5 (ENSPPAG00000039181) #35	HOXB6 (ENSPPAG00000032229) #36	HOXB7 (ENSPPAG00000010963) #37
Chimpanzee	MODERN SPECIES	8	ENSPTRG00000051416	CDC27 (ENSPTRG00000009326)	MYL4 (ENSPTRG00000024314)	EFCAB13 (ENSPTRG00000009329)	ENSPTRG00000045761	ENSPTRG00000048037	NPEPPS (ENSPTRG00000009330) #13	KPNB1 (ENSPTRG00000009333) #14	TBKBP1 (ENSPTRG00000009334) #15	TBX21 (ENSPTRG00000009335) #16	OSBPL7 (ENSPTRG00000009336) #17	MRPL10 (ENSPTRG00000009337) #18	LRRC46 (ENSPTRG00000009338) #19	SCRN2 (ENSPTRG00000009339) #20	SP6 (ENSPTRG00000009340) #21	SP2 (ENSPTRG00000009342) #22	PNPO (ENSPTRG00000009343) #23	PRR15L (ENSPTRG00000047216) #24	CDK5RAP3 (ENSPTRG00000009345) #25	COPZ2 (ENSPTRG00000009346) #26	NFE2L1 (ENSPTRG00000022631) #27	CBX1 (ENSPTRG00000052115) #28	SNX11 (ENSPTRG00000009349) #29	SKAP1 (ENSPTRG00000009350) #30	HOXB1 (ENSPTRG00000009351) #31	HOXB2 (ENSPTRG00000009352) #32	HOXB3 (ENSPTRG00000052423) #33	HOXB4 (ENSPTRG00000009354) #34	HOXB5 (ENSPTRG00000009355) #35	HOXB6 (ENSPTRG00000009356) #36	HOXB7 (ENSPTRG00000009357) #37
Human	MODERN SPECIES	8	GOSR2 (ENSG00000108433)	RPRML (ENSG00000179673)	CDC27 (ENSG00000004897)	MYL4 (ENSG00000198336)	ITGB3 (ENSG00000259207)	EFCAB13 (ENSG00000178852)	NPEPPS (ENSG00000141279) #13	KPNB1 (ENSG00000108424) #14	TBKBP1 (ENSG00000198933) #15	TBX21 (ENSG00000073861) #16	OSBPL7 (ENSG00000006025) #17	MRPL10 (ENSG00000159111) #18	LRRC46 (ENSG00000141294) #19	SCRN2 (ENSG00000141295) #20	SP6 (ENSG00000189120) #21	SP2 (ENSG00000167182) #22	PNPO (ENSG00000108439) #23	PRR15L (ENSG00000167183) #24	CDK5RAP3 (ENSG00000108465) #25	COPZ2 (ENSG00000005243) #26	NFE2L1 (ENSG00000082641) #27	CBX1 (ENSG00000108468) #28	SNX11 (ENSG00000002919) #29	SKAP1 (ENSG00000141293) #30	HOXB1 (ENSG00000120094) #31	HOXB2 (ENSG00000173917) #32	HOXB3 (ENSG00000120093) #33	HOXB4 (ENSG00000182742) #34	HOXB5 (ENSG00000120075) #35	HOXB6 (ENSG00000108511) #36	HOXB7 (ENSG00000260027) #37
Gorilla	MODERN SPECIES	18	ENSGGOG00000040439	CDC27 (ENSGGOG00000014729)	MYL4 (ENSGGOG00000009722)	ITGB3 (ENSGGOG00000007757)	ENSGGOG00000023488	EFCAB13 (ENSGGOG00000022715)	ENSGGOG00000022991 #13	KPNB1 (ENSGGOG00000008089) #14	TBKBP1 (ENSGGOG00000002206) #15	TBX21 (ENSGGOG00000002208) #16	OSBPL7 (ENSGGOG00000015344) #17	MRPL10 (ENSGGOG00000015353) #18	LRRC46 (ENSGGOG00000012667) #19	SCRN2 (ENSGGOG00000004547) #20	SP6 (ENSGGOG00000036261) #21	SP2 (ENSGGOG00000005330) #22	PNPO (ENSGGOG00000003786) #23	PRR15L (ENSGGOG00000037816) #24	ENSGGOG00000022994 #25	COPZ2 (ENSGGOG00000002264) #26	NFE2L1 (ENSGGOG00000002268) #27	CBX1 (ENSGGOG00000024063) #28	ENSGGOG00000025896	SKAP1 (ENSGGOG00000012624) #30	HOXB1 (ENSGGOG00000009904) #31	HOXB2 (ENSGGOG00000009910) #32	HOXB3 (ENSGGOG00000012838) #33	HOXB5 (ENSGGOG00000023582) #35	HOXB6 (ENSGGOG00000002634) #36	HOXB7 (ENSGGOG00000002637) #37	HOXB8 (ENSGGOG00000039810)
Orangutan	MODERN SPECIES	8	SRCIN1 (ENSPPYG00000008871) #8	ARHGAP23 (ENSPPYG00000008872) #9	SOCS7 (ENSPPYG00000008873) #10	ENSPPYG00000039847	GPR179 (ENSPPYG00000008874) #11	MRPL45 (ENSPPYG00000008876) #12	NPEPPS (ENSPPYG00000008877) #13	KPNB1 (ENSPPYG00000025935) #14	TBKBP1 (ENSPPYG00000008878) #15	TBX21 (ENSPPYG00000008879) #16	OSBPL7 (ENSPPYG00000008880) #17	MRPL10 (ENSPPYG00000008881) #18	LRRC46 (ENSPPYG00000032761) #19	SCRN2 (ENSPPYG00000008883) #20	SP6 (ENSPPYG00000008884) #21	SP2 (ENSPPYG00000008885) #22	PNPO (ENSPPYG00000040967) #23	PRR15L (ENSPPYG00000008887) #24	CDK5RAP3 (ENSPPYG00000008888) #25	ENSPPYG00000008889 #26	NFE2L1 (ENSPPYG00000036998) #27	ENSPPYG00000008891 ##28	SNX11 (ENSPPYG00000008892) #29	SKAP1 (ENSPPYG00000008893) #30	HOXB1 (ENSPPYG00000008894) #31	HOXB2 (ENSPPYG00000008895) #32	HOXB3 (ENSPPYG00000008896) #33	HOXB4 (ENSPPYG00000008897) #34	HOXB5 (ENSPPYG00000008898) #35	HOXB6 (ENSPPYG00000008899) #36	HOXB7 (ENSPPYG00000008901) #37
Gibbon	MODERN SPECIES	105								KPNB1 (ENSNLEG00000001446) #14	ENSNLEG00000032565 #15	ENSNLEG00000001655 #16	OSBPL7 (ENSNLEG00000001657) #17	MRPL10 (ENSNLEG00000001803) #18	LRRC46 (ENSNLEG00000001902) #19	SCRN2 (ENSNLEG00000001940) #20	SP6 (ENSNLEG00000002050) #21	ENSNLEG00000002058 #22	PNPO (ENSNLEG00000002062) #23	PRR15L (ENSNLEG00000002102) #24	ENSNLEG00000002109 #25	ENSNLEG00000002409 #26	NFE2L1 (ENSNLEG00000002415) #27	ENSNLEG00000002435 #28	SNX11 (ENSNLEG00000002479) #29	SKAP1 (ENSNLEG00000002519) #30	ENSNLEG00000018815 #31	HOXB2 (ENSNLEG00000002566) #32	HOXB4 (ENSNLEG00000002570) #34	HOXB5 (ENSNLEG00000002574) #35	HOXB6 (ENSNLEG00000002585) #36	ENSNLEG00000029075	ENSNLEG00000036120
Cercopithecidae	ANCESTRAL SPECIES	6	ENSGT00940000157961.C #8	ENSGT00860000135964 #7	ENSGT00940000157982.b #9	ENSGT00940000156314 #10	ENSGT00940000160776 #11	ENSGT00390000012679.n #12	ENSGT00940000155246 #13	ENSGT00550000074898 #14	ENSGT00940000153704.B #15	ENSGT00940000160397 #16	ENSGT00940000157439 #17	ENSGT00390000000603.b #18	ENSGT00940000161315 #19	ENSGT00390000013474.b.a #20	ENSGT00940000161498 #21	ENSGT00940000159590 #22	ENSGT00390000011219 #23	ENSGT00940000154534.a #24	ENSGT00390000000713 #25	ENSGT00390000004405.b #26	ENSGT00950000182892.a.b.a.a #27	ENSGT00940000154152.d.b #28	ENSGT00940000160113 #29	ENSGT00390000017856.b #30	ENSGT00940000159503 #31	ENSGT00940000155029.c.b #32	ENSGT00940000159774 #33	ENSGT00940000162072 #34	ENSGT00940000158354 #35	ENSGT00940000161108 #36	ENSGT00940000161230 #37
Rhinopithecus	ANCESTRAL SPECIES	19	ENSGT00940000157961.C #8	ENSGT00860000135964 #7	ENSGT00940000157982.b #9	ENSGT00940000156314 #10	ENSGT00940000160776 #11	ENSGT00390000012679.m #12	ENSGT00940000155246 #13	ENSGT00550000074898 #14	ENSGT00940000153704.B #15	ENSGT00940000160397 #16	ENSGT00940000157439 #17	ENSGT00390000000603.b #18	ENSGT00940000161315 #19	ENSGT00390000013474.b.a #20	ENSGT00940000161498 #21	ENSGT00940000159590 #22	ENSGT00390000011219 #23	ENSGT00940000154534.a #24	ENSGT00390000000713 #25	ENSGT00390000004405.b #26	ENSGT00950000182892.a.b.a.a #27	ENSGT00940000154152.d.b #28	ENSGT00940000160113 #29	ENSGT00390000017856.b #30	ENSGT00940000159503 #31	ENSGT00940000155029.c.b #32	ENSGT00940000159774 #33	ENSGT00940000162072 #34	ENSGT00940000158354 #35	ENSGT00940000161108 #36	ENSGT00940000161230 #37
Black snub-nosed monkey	MODERN SPECIES	1661												OCRL (ENSRBIG00000041702)	ENSRBIG00000040735	TXNDC2 (ENSRBIG00000040108)	ENSRBIG00000039530	SP2 (ENSRBIG00000032526) #22	PNPO (ENSRBIG00000042160) #23	PRR15L (ENSRBIG00000030176) #24	CDK5RAP3 (ENSRBIG00000039441) #25	COPZ2 (ENSRBIG00000038810) #26	NFE2L1 (ENSRBIG00000034817) #27	ENSRBIG00000027048 #28	SNX11 (ENSRBIG00000030129) #29	SKAP1 (ENSRBIG00000042563) #30	HOXB1 (ENSRBIG00000041849) #31	HOXB2 (ENSRBIG00000029105) #32	HOXB3 (ENSRBIG00000036705) #33	HOXB4 (ENSRBIG00000036141) #34	HOXB5 (ENSRBIG00000015821) #35	HOXB6 (ENSRBIG00000029050) #36	HOXB7 (ENSRBIG00000039896) #37
Golden snub-nosed monkey	MODERN SPECIES	585											OSBPL7 (ENSRROG00000017659) #17	MRPL10 (ENSRROG00000033938) #18	LRRC46 (ENSRROG00000039559) #19	SCRN2 (ENSRROG00000037252) #20	SP6 (ENSRROG00000008983) #21	SP2 (ENSRROG00000037481) #22	PNPO (ENSRROG00000044027) #23	PRR15L (ENSRROG00000009484) #24	CDK5RAP3 (ENSRROG00000044651) #25	COPZ2 (ENSRROG00000030969) #26	NFE2L1 (ENSRROG00000044774) #27	CBX1 (ENSRROG00000041227) #28	SNX11 (ENSRROG00000029464) #29	SKAP1 (ENSRROG00000031517) #30	HOXB1 (ENSRROG00000042747) #31	HOXB2 (ENSRROG00000044849) #32	HOXB3 (ENSRROG00000037630) #33	HOXB5 (ENSRROG00000030674) #35	HOXB6 (ENSRROG00000028093) #36	HOXB7 (ENSRROG00000035066) #37	HOXB8 (ENSRROG00000045349)
Cercopithecinae	ANCESTRAL SPECIES	4	ENSGT00860000135964 #7	ENSGT00940000157961.C #8	ENSGT00940000157982.b #9	ENSGT00940000156314 #10	ENSGT00940000160776 #11	ENSGT00390000012679.n #12	ENSGT00940000155246 #13	ENSGT00550000074898 #14	ENSGT00940000153704.B #15	ENSGT00940000160397 #16	ENSGT00940000157439 #17	ENSGT00390000000603.b #18	ENSGT00940000161315 #19	ENSGT00390000013474.b.a #20	ENSGT00940000161498 #21	ENSGT00940000159590 #22	ENSGT00390000011219 #23	ENSGT00940000154534.a #24	ENSGT00390000000713 #25	ENSGT00390000004405.b #26	ENSGT00950000182892.a.b.a.a #27	ENSGT00940000154152.d.b #28	ENSGT00940000160113 #29	ENSGT00390000017856.b #30	ENSGT00940000159503 #31	ENSGT00940000155029.c.b #32	ENSGT00940000159774 #33	ENSGT00940000162072 #34	ENSGT00940000158354 #35	ENSGT00940000161108 #36	ENSGT00940000161230 #37
Vervet Monkey	MODERN SPECIES	7	EPOP (ENSCSAG00000019040)	SRCIN1 (ENSCSAG00000002635) #8	ARHGAP23 (ENSCSAG00000002632) #9	SOCS7 (ENSCSAG00000002628) #10	GPR179 (ENSCSAG00000002621) #11	ENSCSAG00000002616 #12	NPEPPS (ENSCSAG00000002610) #13	KPNB1 (ENSCSAG00000002605) #14	TBKBP1 (ENSCSAG00000002598) #15	TBX21 (ENSCSAG00000002587) #16	OSBPL7 (ENSCSAG00000002580) #17	MRPL10 (ENSCSAG00000002576) #18	LRRC46 (ENSCSAG00000002574) #19	SCRN2 (ENSCSAG00000002569) #20	SP6 (ENSCSAG00000019041) #21	SP2 (ENSCSAG00000002567) #22	PNPO (ENSCSAG00000002565) #23	PRR15L (ENSCSAG00000019042) #24	CDK5RAP3 (ENSCSAG00000002562) #25	COPZ2 (ENSCSAG00000002558) #26	NFE2L1 (ENSCSAG00000002550) #27	CBX1 (ENSCSAG00000002547) #28	SNX11 (ENSCSAG00000002545) #29	SKAP1 (ENSCSAG00000002542) #30	ENSCSAG00000019043	HOXB1 (ENSCSAG00000002538) #31	HOXB2 (ENSCSAG00000002536) #32	HOXB3 (ENSCSAG00000002533) #33	HOXB4 (ENSCSAG00000002530) #34	HOXB5 (ENSCSAG00000002529) #35	HOXB6 (ENSCSAG00000002526) #36
Cercopithecinae_a	ANCESTRAL SPECIES	4	ENSGT00860000135964 #7	ENSGT00940000157961.C #8	ENSGT00940000157982.b #9	ENSGT00940000156314 #10	ENSGT00940000160776 #11	ENSGT00390000012679.n #12	ENSGT00940000155246 #13	ENSGT00550000074898 #14	ENSGT00940000153704.B #15	ENSGT00940000160397 #16	ENSGT00940000157439 #17	ENSGT00390000000603.b #18	ENSGT00940000161315 #19	ENSGT00390000013474.b.a #20	ENSGT00940000161498 #21	ENSGT00940000159590 #22	ENSGT00390000011219 #23	ENSGT00940000154534.a #24	ENSGT00390000000713 #25	ENSGT00390000004405.b #26	ENSGT00950000182892.a.b.a.a #27	ENSGT00940000154152.d.b #28	ENSGT00940000160113 #29	ENSGT00390000017856.b #30	ENSGT00940000159503 #31	ENSGT00940000155029.c.b #32	ENSGT00940000159774 #33	ENSGT00940000162072 #34	ENSGT00940000158354 #35	ENSGT00940000161108 #36	ENSGT00940000161230 #37
Cercopithecinae_b	ANCESTRAL SPECIES	20	ENSGT00860000135964 #7	ENSGT00940000157961.C #8	ENSGT00940000157982.b #9	ENSGT00940000156314 #10	ENSGT00940000160776 #11	ENSGT00390000012679.n #12	ENSGT00940000155246 #13	ENSGT00550000074898 #14	ENSGT00940000153704.B #15	ENSGT00940000160397 #16	ENSGT00940000157439 #17	ENSGT00390000000603.b #18	ENSGT00940000161315 #19	ENSGT00390000013474.b.a #20	ENSGT00940000161498 #21	ENSGT00940000159590 #22	ENSGT00390000011219 #23	ENSGT00940000154534.a #24	ENSGT00390000000713 #25	ENSGT00390000004405.b #26	ENSGT00950000182892.a.b.a.a #27	ENSGT00940000154152.d.b #28	ENSGT00940000160113 #29	ENSGT00390000017856.b #30	ENSGT00940000159503 #31	ENSGT00940000155029.c.b #32	ENSGT00940000159774 #33	ENSGT00940000162072 #34	ENSGT00940000158354 #35	ENSGT00940000161108 #36	ENSGT00940000161230 #37
Olive baboon	MODERN SPECIES	8	ENSPANG00000041026	SRCIN1 (ENSPANG00000022035) #8	ARHGAP23 (ENSPANG00000022030) #9	SOCS7 (ENSPANG00000022062) #10	GPR179 (ENSPANG00000022074) #11	MRPL45 (ENSPANG00000022083) #12	NPEPPS (ENSPANG00000022080) #13	KPNB1 (ENSPANG00000022099) #14	TBKBP1 (ENSPANG00000022108) #15	TBX21 (ENSPANG00000022107) #16	OSBPL7 (ENSPANG00000022928) #17	MRPL10 (ENSPANG00000022926) #18	LRRC46 (ENSPANG00000022918) #19	SCRN2 (ENSPANG00000022920) #20	SP6 (ENSPANG00000017158) #21	SP2 (ENSPANG00000022922) #22	PNPO (ENSPANG00000022924) #23	CDK5RAP3 (ENSPANG00000022902) #25	COPZ2 (ENSPANG00000022903) #26	NFE2L1 (ENSPANG00000022904) #27	CBX1 (ENSPANG00000022906) #28	SNX11 (ENSPANG00000022898) #29	ENSPANG00000026200	SKAP1 (ENSPANG00000022897) #30	HOXB1 (ENSPANG00000022886) #31	HOXB2 (ENSPANG00000034765) #32	ENSPANG00000045928	HOXB4 (ENSPANG00000022888) #34	HOXB5 (ENSPANG00000022889) #35	HOXB6 (ENSPANG00000022891) #36	HOXB7 (ENSPANG00000041701) #37
Cercopithecinae_d	ANCESTRAL SPECIES	7	ENSGT00860000135964 #7	ENSGT00940000157961.C #8	ENSGT00940000157982.b #9	ENSGT00940000156314 #10	ENSGT00940000160776 #11	ENSGT00390000012679.n #12	ENSGT00940000155246 #13	ENSGT00550000074898 #14	ENSGT00940000153704.B #15	ENSGT00940000160397 #16	ENSGT00940000157439 #17	ENSGT00390000000603.b #18	ENSGT00940000161315 #19	ENSGT00390000013474.b.a #20	ENSGT00940000161498 #21	ENSGT00940000159590 #22	ENSGT00390000011219 #23	ENSGT00940000154534.a #24	ENSGT00390000000713 #25	ENSGT00390000004405.b #26	ENSGT00950000182892.a.b.a.a #27	ENSGT00940000154152.d.b #28	ENSGT00940000160113 #29	ENSGT00390000017856.b #30	ENSGT00940000159503 #31	ENSGT00940000155029.c.b #32	ENSGT00940000159774 #33	ENSGT00940000162072 #34	ENSGT00940000158354 #35	ENSGT00940000161108 #36	ENSGT00940000161230 #37
Drill	MODERN SPECIES	1297											OSBPL7 (ENSMLEG00000040663) #17	MRPL10 (ENSMLEG00000042780) #18	LRRC46 (ENSMLEG00000031583) #19	SCRN2 (ENSMLEG00000041491) #20	SP6 (ENSMLEG00000027177) #21	SP2 (ENSMLEG00000032228) #22	PNPO (ENSMLEG00000040872) #23	PRR15L (ENSMLEG00000020212) #24	CDK5RAP3 (ENSMLEG00000033869) #25	COPZ2 (ENSMLEG00000039090) #26	NFE2L1 (ENSMLEG00000039330) #27	CBX1 (ENSMLEG00000038745) #28	SNX11 (ENSMLEG00000039008) #29	SKAP1 (ENSMLEG00000029308) #30	HOXB1 (ENSMLEG00000037557) #31	HOXB2 (ENSMLEG00000031955) #32	HOXB4 (ENSMLEG00000029897) #34	HOXB3 (ENSMLEG00000026268) #33	HOXB5 (ENSMLEG00000009970) #35	HOXB6 (ENSMLEG00000029580) #36	HOXB7 (ENSMLEG00000042331) #37
Sooty mangabey	DUPLICATION
Sooty mangabey	MODERN SPECIES	40																ENSCATG00000029564 #22
Sooty mangabey	MODERN SPECIES	564	ENSCATG00000032235 #7	SRCIN1 (ENSCATG00000035063) #8	ARHGAP23 (ENSCATG00000031687) #9	SOCS7 (ENSCATG00000038123) #10	GPR179 (ENSCATG00000016000) #11	ENSCATG00000005112 #12	NPEPPS (ENSCATG00000011160) #13	KPNB1 (ENSCATG00000037124) #14	TBKBP1 (ENSCATG00000040564) #15	TBX21 (ENSCATG00000010529) #16	OSBPL7 (ENSCATG00000033623) #17	MRPL10 (ENSCATG00000035686) #18	LRRC46 (ENSCATG00000031406) #19	SCRN2 (ENSCATG00000038846) #20	SP6 (ENSCATG00000020123) #21	ENSCATG00000003341 #22	PNPO (ENSCATG00000039934) #23	PRR15L (ENSCATG00000020186) #24	CDK5RAP3 (ENSCATG00000006699) #25	COPZ2 (ENSCATG00000042708) #26	NFE2L1 (ENSCATG00000040775) #27	ENSCATG00000034735 ##28	SNX11 (ENSCATG00000030351) #29	ENSCATG00000019817	SKAP1 (ENSCATG00000044458) #30	HOXB1 (ENSCATG00000035575) #31	HOXB2 (ENSCATG00000035238) #32	HOXB4 (ENSCATG00000040704) #34	HOXB3 (ENSCATG00000031126) #33	HOXB5 (ENSCATG00000027616) #35	HOXB6 (ENSCATG00000043342) #36
Macaca	ANCESTRAL SPECIES	4	ENSGT00940000157961.C #8	ENSGT00860000135964 #7	ENSGT00940000157982.b #9	ENSGT00940000156314 #10	ENSGT00940000160776 #11	ENSGT00390000012679.n #12	ENSGT00940000155246 #13	ENSGT00550000074898 #14	ENSGT00940000153704.B #15	ENSGT00940000160397 #16	ENSGT00940000157439 #17	ENSGT00390000000603.b #18	ENSGT00940000161315 #19	ENSGT00390000013474.b.a #20	ENSGT00940000161498 #21	ENSGT00940000159590 #22	ENSGT00390000011219 #23	ENSGT00940000154534.a #24	ENSGT00390000000713 #25	ENSGT00390000004405.b #26	ENSGT00950000182892.a.b.a.a #27	ENSGT00940000154152.d.b #28	ENSGT00940000160113 #29	ENSGT00390000017856.b #30	ENSGT00940000159503 #31	ENSGT00940000155029.c.b #32	ENSGT00940000159774 #33	ENSGT00940000162072 #34	ENSGT00940000158354 #35	ENSGT00940000161108 #36	ENSGT00940000161230 #37
Pig-tailed macaque	MODERN SPECIES	494	SRCIN1 (ENSMNEG00000015519) #8	ENSMNEG00000035424 #7	ARHGAP23 (ENSMNEG00000037605) #9	SOCS7 (ENSMNEG00000032316) #10	GPR179 (ENSMNEG00000042928) #11	ENSMNEG00000044663 #12	NPEPPS (ENSMNEG00000000757) #13	KPNB1 (ENSMNEG00000040927) #14	TBKBP1 (ENSMNEG00000039009) #15	TBX21 (ENSMNEG00000036627) #16	OSBPL7 (ENSMNEG00000042829) #17	MRPL10 (ENSMNEG00000030905) #18	LRRC46 (ENSMNEG00000037035) #19	SCRN2 (ENSMNEG00000031786) #20	SP6 (ENSMNEG00000023861) #21	SP2 (ENSMNEG00000029577) #22	PNPO (ENSMNEG00000037010) #23	PRR15L (ENSMNEG00000028174) #24	CDK5RAP3 (ENSMNEG00000029039) #25	COPZ2 (ENSMNEG00000038720) #26	NFE2L1 (ENSMNEG00000037921) #27	CBX1 (ENSMNEG00000039720) #28	SNX11 (ENSMNEG00000034920) #29	SKAP1 (ENSMNEG00000015541) #30	ENSMNEG00000033446	HOXB1 (ENSMNEG00000036848) #31	HOXB2 (ENSMNEG00000043416) #32	HOXB3 (ENSMNEG00000032425) #33	HOXB4 (ENSMNEG00000032435) #34	HOXB5 (ENSMNEG00000039003) #35	HOXB6 (ENSMNEG00000042554) #36
Macaca_a	ANCESTRAL SPECIES	4	ENSGT00940000157961.C #8	ENSGT00940000157982.b #9	ENSGT00940000156314 #10	ENSGT00940000163244.d.b.a.b.b.b.b.b.b.b.b.a.b.a.a.b	ENSGT00940000160776 #11	ENSGT00390000012679.n #12	ENSGT00940000155246 #13	ENSGT00550000074898 #14	ENSGT00940000153704.B #15	ENSGT00940000160397 #16	ENSGT00940000157439 #17	ENSGT00940000161315 #19	ENSGT00390000013474.b.a #20	ENSGT00940000161498 #21	ENSGT01100000263493.a.b.b.a.a.b.b.a.a.a.a.a.a.a.d.a.b.b	ENSGT00940000159590 #22	ENSGT00390000011219 #23	ENSGT00940000154534.a #24	ENSGT00390000000713 #25	ENSGT00390000004405.b #26	ENSGT00950000182892.a.b.a.a #27	ENSGT00940000154152.d.b #28	ENSGT00940000160113 #29	ENSGT00390000017856.b #30	ENSGT00940000159503 #31	ENSGT00940000155029.c.b #32	ENSGT00980000199681	ENSGT00940000162072 #34	ENSGT00940000158354 #35	ENSGT00940000161108 #36	ENSGT00940000161230 #37
Rhesus	MODERN SPECIES	7	SRCIN1 (ENSMMUG00000005041) #8	ARHGAP23 (ENSMMUG00000020020) #9	SOCS7 (ENSMMUG00000020531) #10	ENSMMUG00000055904	GPR179 (ENSMMUG00000020528) #11	MRPL45 (ENSMMUG00000030213) #12	NPEPPS (ENSMMUG00000005869) #13	KPNB1 (ENSMMUG00000019760) #14	TBKBP1 (ENSMMUG00000019762) #15	TBX21 (ENSMMUG00000057231) #16	OSBPL7 (ENSMMUG00000019039) #17	LRRC46 (ENSMMUG00000061605) #19	MRPL10 (ENSMMUG00000021486) #20	SP6 (ENSMMUG00000061952) #21	ENSMMUG00000053935	SP2 (ENSMMUG00000004765) #22	PNPO (ENSMMUG00000003325) #23	PRR15L (ENSMMUG00000050551) #24	CDK5RAP3 (ENSMMUG00000004760) #25	COPZ2 (ENSMMUG00000021934) #26	NFE2L1 (ENSMMUG00000021935) #27	CBX1 (ENSMMUG00000019882) #28	SNX11 (ENSMMUG00000020658) #29	SKAP1 (ENSMMUG00000050742) #30	HOXB1 (ENSMMUG00000022212) #31	HOXB2 (ENSMMUG00000057001) #32	HOXB4 (ENSMMUG00000052130) #34	ENSMMUG00000045203	HOXB5 (ENSMMUG00000051420) #35	HOXB6 (ENSMMUG00000062283) #36	HOXB7 (ENSMMUG00000055324) #37
Crab-eating macaque	MODERN SPECIES	7	ENSMFAG00000049053	ENSMFAG00000062343	SOCS7 (ENSMFAG00000044702) #10	ENSMFAG00000064016	GPR179 (ENSMFAG00000002774) #11	MRPL45 (ENSMFAG00000043718) #12	NPEPPS (ENSMFAG00000003608) #13	KPNB1 (ENSMFAG00000030197) #14	TBKBP1 (ENSMFAG00000001252) #15	TBX21 (ENSMFAG00000042504) #16	OSBPL7 (ENSMFAG00000001330) #17	LRRC46 (ENSMFAG00000031915) #19	ENSMFAG00000030335 #20	SP6 (ENSMFAG00000030247) #21	ENSMFAG00000052999	SP2 (ENSMFAG00000038712) #22	PNPO (ENSMFAG00000039285) #23	PRR15L (ENSMFAG00000030161) #24	CDK5RAP3 (ENSMFAG00000046364) #25	COPZ2 (ENSMFAG00000045896) #26	NFE2L1 (ENSMFAG00000035583) #27	CBX1 (ENSMFAG00000036790) #28	SNX11 (ENSMFAG00000001845) #29	ENSMFAG00000047205	ENSMFAG00000048147	SKAP1 (ENSMFAG00000038763) #30	HOXB1 (ENSMFAG00000052359) #31	HOXB2 (ENSMFAG00000034146) #32	ENSMFAG00000062776	HOXB4 (ENSMFAG00000041000) #34	HOXB5 (ENSMFAG00000042418) #35
Euarchontoglires_A	ANCESTRAL SPECIES	4	ENSGT00940000157961.C #8	ENSGT00860000135964 #7	ENSGT00940000157982.b #9	ENSGT00940000156314 #10	ENSGT00940000160776 #11	ENSGT00390000012679 #12	ENSGT00940000155246 #13	ENSGT00550000074898 #14	ENSGT00940000153704.B #15	ENSGT00940000160397 #16	ENSGT00940000157439 #17	ENSGT00390000000603 #18	ENSGT00940000161315 #19	ENSGT00390000013474.b.a #20	ENSGT00940000161498 #21	ENSGT00940000159590 #22	ENSGT00390000011219 #23	ENSGT00940000154534.a #24	ENSGT00390000000713 #25	ENSGT00390000004405.b #26	ENSGT00950000182892.a.b.a.a #27	ENSGT00940000154152.d.b #28	ENSGT00940000160113 #29	ENSGT00390000017856.b #30	ENSGT00940000159503 #31	ENSGT00940000155029.c.b #32	ENSGT00940000159774 #33	ENSGT00940000162072 #34	ENSGT00940000158354 #35	ENSGT00940000161108 #36	ENSGT00940000161230 #37
Tree shrew	MODERN SPECIES	8668																SP2 (ENSTBEG00000013463) #22
Glires	ANCESTRAL SPECIES	3	ENSGT00940000157961.C #8	ENSGT00860000135964 #7	ENSGT00940000157982.b #9	ENSGT00940000156314 #10	ENSGT00940000160776 #11	ENSGT00390000012679 #12	ENSGT00940000155246 #13	ENSGT00550000074898 #14	ENSGT00940000153704.B #15	ENSGT00940000160397 #16	ENSGT00940000157439 #17	ENSGT00390000000603 #18	ENSGT00940000161315 #19	ENSGT00390000013474.b.a #20	ENSGT00940000161498 #21	ENSGT00940000159590 #22	ENSGT00390000011219 #23	ENSGT00940000154534.a #24	ENSGT00390000000713 #25	ENSGT00390000004405.b #26	ENSGT00950000182892.a.b.a.a #27	ENSGT00940000154152.d.b.dc #28	ENSGT00940000160113 #29	ENSGT00390000017856.b #30	ENSGT00940000159503 #31	ENSGT00940000155029.c.b #32	ENSGT00940000159774 #33	ENSGT00940000162072 #34	ENSGT00940000158354 #35	ENSGT00940000161108 #36	ENSGT00940000161230 #37
Rodentia	ANCESTRAL SPECIES	4	ENSGT00940000157961.C #8	ENSGT00860000135964 #7	ENSGT00940000157982.b #9	ENSGT00940000156314 #10	ENSGT00940000160776 #11	ENSGT00390000012679 #12	ENSGT00940000155246 #13	ENSGT00550000074898 #14	ENSGT00940000153704.B #15	ENSGT00940000160397 #16	ENSGT00940000157439 #17	ENSGT00390000000603 #18	ENSGT00940000161315 #19	ENSGT00390000013474.b.a #20	ENSGT00940000161498 #21	ENSGT00940000159590 #22	ENSGT00390000011219 #23	ENSGT00940000154534.a #24	ENSGT00390000000713 #25	ENSGT00390000004405.b #26	ENSGT00950000182892.a.b.a.a #27	ENSGT00940000154152.d.b.dc.b #28	ENSGT00940000160113 #29	ENSGT00390000017856.b #30	ENSGT00940000159503 #31	ENSGT00940000155029.c.b #32	ENSGT00940000159774 #33	ENSGT00940000162072 #34	ENSGT00940000158354 #35	ENSGT00940000161108 #36	ENSGT00940000161230 #37
Rodentia_B	ANCESTRAL SPECIES	1	ENSGT00940000153451.a.a.a	ENSGT00940000157961.C #8	ENSGT00940000157982.b #9	ENSGT00940000156314 #10	ENSGT00940000160776 #11	ENSGT00390000012679 #12	ENSGT00940000155246 #13	ENSGT00550000074898 #14	ENSGT00940000153704.B #15	ENSGT00940000160397 #16	ENSGT00940000157439 #17	ENSGT00390000000603 #18	ENSGT00940000161315 #19	ENSGT00390000013474.b.a #20	ENSGT00940000161498 #21	ENSGT00940000159590 #22	ENSGT00390000011219 #23	ENSGT00940000154534.a #24	ENSGT00390000000713 #25	ENSGT00390000004405.b #26	ENSGT00950000182892.a.b.a.a #27	ENSGT00940000154152.d.b.dc.b #28	ENSGT00940000160113 #29	ENSGT00390000017856.b #30	ENSGT00940000159503 #31	ENSGT00940000155029.c.b #32	ENSGT00940000159774 #33	ENSGT00940000162072 #34	ENSGT00940000158354 #35	ENSGT00940000161108 #36	ENSGT00940000161230 #37
Myomorpha	ANCESTRAL SPECIES		ENSGT00940000153451.a.a.a	ENSGT00940000157961.C #8	ENSGT00940000157982.b #9	ENSGT00940000156314 #10	ENSGT00940000160776 #11	ENSGT00390000012679 #12	ENSGT00940000155246 #13	ENSGT00550000074898 #14	ENSGT00940000153704.B #15	ENSGT00940000160397 #16	ENSGT00940000157439 #17	ENSGT00390000000603 #18	ENSGT00940000161315 #19	ENSGT00390000013474.b.a #20	ENSGT00940000161498 #21	ENSGT00940000159590 #22	ENSGT00390000011219 #23	ENSGT00940000154534.a #24	ENSGT00390000000713 #25	ENSGT00390000004405.b #26	ENSGT00950000182892.a.b.a.a #27	ENSGT00940000154152.d.b.dc.b #28	ENSGT00940000160113 #29	ENSGT00390000017856.b #30	ENSGT00940000159503 #31	ENSGT00940000155029.c.b #32	ENSGT00940000159774 #33	ENSGT00940000162072 #34	ENSGT00940000158354 #35	ENSGT00940000161108 #36	ENSGT00940000161230 #37
Muroidea	ANCESTRAL SPECIES		ENSGT00940000153451.a.a.a	ENSGT00940000157961.C #8	ENSGT00940000157982.b #9	ENSGT00940000156314 #10	ENSGT00940000160776 #11	ENSGT00390000012679 #12	ENSGT00940000155246 #13	ENSGT00550000074898 #14	ENSGT00940000153704.B #15	ENSGT00940000160397 #16	ENSGT00940000157439 #17	ENSGT00390000000603 #18	ENSGT00940000161315 #19	ENSGT00390000013474.b.a #20	ENSGT00940000161498 #21	ENSGT00940000159590 #22	ENSGT00390000011219 #23	ENSGT00940000154534.a #24	ENSGT00390000000713 #25	ENSGT00390000004405.b #26	ENSGT00950000182892.a.b.a.a #27	ENSGT00940000154152.d.b.dc.b #28	ENSGT00940000160113 #29	ENSGT00390000017856.b #30	ENSGT00940000159503 #31	ENSGT00940000155029.c.b #32	ENSGT00940000159774 #33	ENSGT00940000162072 #34	ENSGT00940000158354 #35	ENSGT00940000161108 #36	ENSGT00940000161230 #37
Muroidea_A	ANCESTRAL SPECIES	1	ENSGT00940000153451.a.a.a	ENSGT00940000157961.C #8	ENSGT00940000157982.b #9	ENSGT00940000156314 #10	ENSGT00940000160776 #11	ENSGT00390000012679 #12	ENSGT00940000155246 #13	ENSGT00550000074898 #14	ENSGT00940000153704.B #15	ENSGT00940000160397 #16	ENSGT00940000157439 #17	ENSGT00390000000603 #18	ENSGT00940000161315 #19	ENSGT00390000013474.b.a #20	ENSGT00940000161498 #21	ENSGT00940000159590 #22	ENSGT00390000011219 #23	ENSGT00940000154534.a #24	ENSGT00390000000713 #25	ENSGT00390000004405.b #26	ENSGT00950000182892.a.b.a.a #27	ENSGT00940000154152.d.b.dc.b #28	ENSGT00940000160113 #29	ENSGT00390000017856.b #30	ENSGT00940000159503 #31	ENSGT00940000155029.c.b #32	ENSGT00940000159774 #33	ENSGT00940000162072 #34	ENSGT00940000158354 #35	ENSGT00940000161108 #36	ENSGT00940000161230 #37
Cricetidae	ANCESTRAL SPECIES		ENSGT00940000153451.a.a.a	ENSGT00940000157961.C #8	ENSGT00940000157982.b #9	ENSGT00940000156314 #10	ENSGT00940000160776 #11	ENSGT00390000012679 #12	ENSGT00940000155246 #13	ENSGT00550000074898 #14	ENSGT00940000153704.B #15	ENSGT00940000160397 #16	ENSGT00940000157439 #17	ENSGT00390000000603 #18	ENSGT00940000161315 #19	ENSGT00390000013474.b.a #20	ENSGT00940000161498 #21	ENSGT00940000159590 #22	ENSGT00390000011219 #23	ENSGT00940000154534.a #24	ENSGT00390000000713 #25	ENSGT00390000004405.b #26	ENSGT00950000182892.a.b.a.a #27	ENSGT00940000154152.d.b.dc.b #28	ENSGT00940000154152.d.a.a ##28	ENSGT00940000160113 #29	ENSGT00390000017856.b #30	ENSGT00940000159503 #31	ENSGT00940000155029.c.b #32	ENSGT00940000159774 #33	ENSGT00940000162072 #34	ENSGT00940000158354 #35	ENSGT00940000161108 #36
Cricetinae	ANCESTRAL SPECIES		ENSGT00940000153451.a.a.a	ENSGT00940000157961.C #8	ENSGT00940000157982.b #9	ENSGT00940000156314 #10	ENSGT00940000160776 #11	ENSGT00390000012679 #12	ENSGT00940000155246 #13	ENSGT00550000074898 #14	ENSGT00940000153704.B #15	ENSGT00940000160397 #16	ENSGT00940000157439 #17	ENSGT00390000000603 #18	ENSGT00940000161315 #19	ENSGT00390000013474.b.a #20	ENSGT00940000161498 #21	ENSGT00940000159590 #22	ENSGT00390000011219 #23	ENSGT00940000154534.a #24	ENSGT00390000000713 #25	ENSGT00390000004405.b #26	ENSGT00950000182892.a.b.a.a #27	ENSGT00940000154152.d.b.dc.a.b #28	ENSGT00940000160113 #29	ENSGT00390000017856.b #30	ENSGT00940000159503 #31	ENSGT00940000155029.c.b #32	ENSGT00940000159774 #33	ENSGT00940000162072 #34	ENSGT00940000158354 #35	ENSGT00940000161108 #36	ENSGT00940000161230 #37
Golden Hamster	MODERN SPECIES	674	Epop (ENSMAUG00000015662)	Srcin1 (ENSMAUG00000021175) #8	Arhgap23 (ENSMAUG00000018856) #9	Socs7 (ENSMAUG00000015461) #10	ENSMAUG00000015632 #11	Mrpl45 (ENSMAUG00000021636) #12	Npepps (ENSMAUG00000017383) #13	Kpnb1 (ENSMAUG00000006211) #14	Tbkbp1 (ENSMAUG00000018604) #15	Tbx21 (ENSMAUG00000017507) #16	Osbpl7 (ENSMAUG00000013876) #17	Mrpl10 (ENSMAUG00000000820) #18	Lrrc46 (ENSMAUG00000019416) #19	Scrn2 (ENSMAUG00000010014) #20	Sp6 (ENSMAUG00000009667) #21	Sp2 (ENSMAUG00000019269) #22	Pnpo (ENSMAUG00000021706) #23	Cdk5rap3 (ENSMAUG00000007991) #25	Copz2 (ENSMAUG00000010560) #26	Nfe2l1 (ENSMAUG00000020456) #27	ENSMAUG00000003463 #28	Snx11 (ENSMAUG00000021528) #29	Skap1 (ENSMAUG00000022191) #30	Hoxb1 (ENSMAUG00000013237) #31	Hoxb2 (ENSMAUG00000021979) #32	Hoxb3 (ENSMAUG00000011251) #33	Hoxb4 (ENSMAUG00000009367) #34	Hoxb5 (ENSMAUG00000021419) #35	Hoxb6 (ENSMAUG00000021423) #36	Hoxb7 (ENSMAUG00000021297) #37	Hoxb8 (ENSMAUG00000012636)
Chinese hamster chok1gshd	MODERN SPECIES	33	ENSCGRG00001002748	Srcin1 (ENSCGRG00001017021) #8	Arhgap23 (ENSCGRG00001018199) #9	Socs7 (ENSCGRG00001021949) #10	Gpr179 (ENSCGRG00001014708) #11	Mrpl45 (ENSCGRG00001000066) #12	Npepps (ENSCGRG00001005930) #13	Kpnb1 (ENSCGRG00001016042) #14	Tbkbp1 (ENSCGRG00001018526) #15	Tbx21 (ENSCGRG00001008276) #16	Osbpl7 (ENSCGRG00001013737) #17	Mrpl10 (ENSCGRG00001024199) #18	Lrrc46 (ENSCGRG00001019758) #19	Scrn2 (ENSCGRG00001022143) #20	Sp6 (ENSCGRG00001002797) #21	Sp2 (ENSCGRG00001010976) #22	Pnpo (ENSCGRG00001018189) #23	Prr15l (ENSCGRG00001008926) #24	Cdk5rap3 (ENSCGRG00001006966) #25	Copz2 (ENSCGRG00001014767) #26	Nfe2l1 (ENSCGRG00001015287) #27	Cbx1 (ENSCGRG00001014799) ##28	Snx11 (ENSCGRG00001022221) #29	ENSCGRG00001020759 #30	ENSCGRG00001023355 #30	Hoxb1 (ENSCGRG00001024619) #31	Hoxb2 (ENSCGRG00001017587) #32	Hoxb3 (ENSCGRG00001016667) #33	Hoxb4 (ENSCGRG00001022431) #34	Hoxb5 (ENSCGRG00001016167) #35	Hoxb6 (ENSCGRG00001015674) #36
Cricetidae_B	ANCESTRAL SPECIES		ENSGT00940000153451.a.a.a	ENSGT00940000157961.C #8	ENSGT00940000157982.b #9	ENSGT00940000156314 #10	ENSGT00940000160776 #11	ENSGT00390000012679 #12	ENSGT00940000155246 #13	ENSGT00550000074898 #14	ENSGT00940000153704.B #15	ENSGT00940000160397 #16	ENSGT00940000157439 #17	ENSGT00390000000603 #18	ENSGT00940000161315 #19	ENSGT00390000013474.b.a #20	ENSGT00940000161498 #21	ENSGT00940000159590 #22	ENSGT00390000011219 #23	ENSGT00940000154534.a #24	ENSGT00390000000713 #25	ENSGT00390000004405.b #26	ENSGT00950000182892.a.b.a.a #27	ENSGT00940000154152.d.b.dc.b #28	ENSGT00940000160113 #29	ENSGT00390000017856.b #30	ENSGT00940000159503 #31	ENSGT00940000155029.c.b #32	ENSGT00940000159774 #33	ENSGT00940000162072 #34	ENSGT00940000158354 #35	ENSGT00940000161108 #36	ENSGT00940000161230 #37
Prairie vole	MODERN SPECIES	114	Epop (ENSMOCG00000020613)	Srcin1 (ENSMOCG00000017212) #8	Arhgap23 (ENSMOCG00000005846) #9	Socs7 (ENSMOCG00000015144) #10	ENSMOCG00000022822 #11	Mrpl45 (ENSMOCG00000002139) #12	Npepps (ENSMOCG00000011600) #13	Kpnb1 (ENSMOCG00000003683) #14	Tbkbp1 (ENSMOCG00000017020) #15	Tbx21 (ENSMOCG00000004097) #16	Osbpl7 (ENSMOCG00000021054) #17	Mrpl10 (ENSMOCG00000019451) #18	Lrrc46 (ENSMOCG00000016707) #19	Scrn2 (ENSMOCG00000019511) #20	Sp6 (ENSMOCG00000007065) #21	Sp2 (ENSMOCG00000020935) #22	Pnpo (ENSMOCG00000011655) #23	Prr15l (ENSMOCG00000006695) #24	Cdk5rap3 (ENSMOCG00000019534) #25	Copz2 (ENSMOCG00000022427) #26	Nfe2l1 (ENSMOCG00000016002) #27	Cbx1 (ENSMOCG00000001520) #28	Snx11 (ENSMOCG00000019303) #29	Skap1 (ENSMOCG00000018431) #30	Hoxb1 (ENSMOCG00000002452) #31	Hoxb2 (ENSMOCG00000014846) #32	Hoxb3 (ENSMOCG00000020739) #33	Hoxb4 (ENSMOCG00000022964) #34	Hoxb5 (ENSMOCG00000014523) #35	Hoxb6 (ENSMOCG00000020355) #36	Hoxb7 (ENSMOCG00000020820) #37
Northern American deer mouse	MODERN SPECIES	21	Epop (ENSPEMG00000026437)	Srcin1 (ENSPEMG00000014663) #8	Arhgap23 (ENSPEMG00000004296) #9	Socs7 (ENSPEMG00000000521) #10	ENSPEMG00000027307 #11	Mrpl45 (ENSPEMG00000005654) #12	Npepps (ENSPEMG00000012220) #13	Kpnb1 (ENSPEMG00000017783) #14	Tbkbp1 (ENSPEMG00000027762) #15	Tbx21 (ENSPEMG00000010056) #16	Osbpl7 (ENSPEMG00000001423) #17	Mrpl10 (ENSPEMG00000014613) #18	Lrrc46 (ENSPEMG00000020507) #19	Scrn2 (ENSPEMG00000020381) #20	Sp6 (ENSPEMG00000001231) #21	Sp2 (ENSPEMG00000017112) #22	Pnpo (ENSPEMG00000025094) #23	Prr15l (ENSPEMG00000024436) #24	ENSPEMG00000030963	Cdk5rap3 (ENSPEMG00000020712) #25	Copz2 (ENSPEMG00000011137) #26	Nfe2l1 (ENSPEMG00000010512) #27	Cbx1 (ENSPEMG00000020976) ##28	Snx11 (ENSPEMG00000000381) #29	ENSPEMG00000020286	Skap1 (ENSPEMG00000000585) #30	Hoxb1 (ENSPEMG00000023977) #31	Hoxb2 (ENSPEMG00000029510) #32	Hoxb3 (ENSPEMG00000028692) #33	Hoxb4 (ENSPEMG00000029805) #34	Hoxb5 (ENSPEMG00000030101) #35
Murinae	ANCESTRAL SPECIES	6	ENSGT00940000153451.a.a.a	ENSGT00940000157961.C #8	ENSGT00940000157982.b #9	ENSGT00940000156314 #10	ENSGT00940000160776 #11	ENSGT00390000012679 #12	ENSGT00940000155246 #13	ENSGT00550000074898 #14	ENSGT00940000153704.B #15	ENSGT00940000160397 #16	ENSGT00940000157439 #17	ENSGT00390000000603 #18	ENSGT00940000161315 #19	ENSGT00390000013474.b.a #20	ENSGT00940000161498 #21	ENSGT00940000159590 #22	ENSGT00390000011219 #23	ENSGT00940000154534.a #24	ENSGT00390000000713 #25	ENSGT00390000004405.b #26	ENSGT00950000182892.a.b.a.a #27	ENSGT00940000154152.d.b.dc.b #28	ENSGT00940000160113 #29	ENSGT00390000017856.b #30	ENSGT00940000159503 #31	ENSGT00940000155029.c.b #32	ENSGT00940000159774 #33	ENSGT00940000162072 #34	ENSGT00940000158354 #35	ENSGT00940000161108 #36	ENSGT00940000161230 #37
Mus	ANCESTRAL SPECIES	2	ENSGT00940000157961.C #8	ENSGT00940000157982.b #9	ENSGT00800000125316	ENSGT00940000156314 #10	ENSGT00940000160776 #11	ENSGT00390000012679 #12	ENSGT00940000155246 #13	ENSGT00550000074898 #14	ENSGT00940000153704.B #15	ENSGT00940000160397 #16	ENSGT00940000157439 #17	ENSGT00390000000603 #18	ENSGT00940000161315 #19	ENSGT00390000013474.b.a #20	ENSGT00940000161498 #21	ENSGT00940000159590 #22	ENSGT00390000011219 #23	ENSGT00940000154534.a #24	ENSGT00390000000713 #25	ENSGT00390000004405.b #26	ENSGT00950000182892.a.b.a.a #27	ENSGT00940000153593.c.b.k	ENSGT00940000154152.d.b.dc.b #28	ENSGT00940000160113 #29	ENSGT00390000017856.b #30	ENSGT00940000159503 #31	ENSGT00940000155029.c.b #32	ENSGT00940000159774 #33	ENSGT00940000162072 #34	ENSGT00940000158354 #35	ENSGT00940000161108 #36
Mus_A	ANCESTRAL SPECIES	2	ENSGT00940000157961.C #8	ENSGT00940000157982.b #9	ENSGT00800000125316	ENSGT00940000156314 #10	ENSGT00940000160776 #11	ENSGT00390000012679 #12	ENSGT00940000155246 #13	ENSGT00550000074898 #14	ENSGT00940000153704.B #15	ENSGT00940000160397 #16	ENSGT00940000157439 #17	ENSGT00390000000603 #18	ENSGT00940000161315 #19	ENSGT00390000013474.b.a #20	ENSGT00940000161498 #21	ENSGT00940000159590 #22	ENSGT00390000011219 #23	ENSGT00940000154534.a #24	ENSGT00390000000713 #25	ENSGT00390000004405.b #26	ENSGT00950000182892.a.b.a.a #27	ENSGT00940000153593.c.b.k	ENSGT00940000154152.d.b.dc.b #28	ENSGT00940000160113 #29	ENSGT00390000017856.b #30	ENSGT00940000159503 #31	ENSGT00940000155029.c.b #32	ENSGT00940000159774 #33	ENSGT00940000162072 #34	ENSGT00940000158354 #35	ENSGT00940000161108 #36
Mus_B	ANCESTRAL SPECIES	2	ENSGT00940000157961.C #8	ENSGT00940000157982.b #9	ENSGT00800000125316	ENSGT00940000156314 #10	ENSGT00940000160776 #11	ENSGT00390000012679 #12	ENSGT00940000155246 #13	ENSGT00550000074898 #14	ENSGT00940000153704.B #15	ENSGT00940000160397 #16	ENSGT00940000157439 #17	ENSGT00390000000603 #18	ENSGT00940000161315 #19	ENSGT00390000013474.b.a #20	ENSGT00940000161498 #21	ENSGT00940000159590 #22	ENSGT00390000011219 #23	ENSGT00940000154534.a #24	ENSGT00390000000713 #25	ENSGT00390000004405.b #26	ENSGT00950000182892.a.b.a.a #27	ENSGT00940000153593.c.b.k	ENSGT00940000154152.d.b.dc.b #28	ENSGT00940000160113 #29	ENSGT00390000017856.b #30	ENSGT00940000159503 #31	ENSGT00940000155029.c.b #32	ENSGT00940000159774 #33	ENSGT00940000162072 #34	ENSGT00940000158354 #35	ENSGT00940000161108 #36
Mouse	MODERN SPECIES	2	Epop (ENSMUSG00000043439)	Srcin1 (ENSMUSG00000038453) #8	Arhgap23 (ENSMUSG00000049807) #9	Socs7 (ENSMUSG00000038485) #10	Gpr179 (ENSMUSG00000070337) #11	Mrpl45 (ENSMUSG00000018882) #12	Npepps (ENSMUSG00000001441) #13	Kpnb1 (ENSMUSG00000001440) #14	Tbkbp1 (ENSMUSG00000038517) #15	Tbx21 (ENSMUSG00000001444) #16	Osbpl7 (ENSMUSG00000038534) #17	Mrpl10 (ENSMUSG00000001445) #18	Lrrc46 (ENSMUSG00000020878) #19	Scrn2 (ENSMUSG00000020877) #20	Sp6 (ENSMUSG00000038560) #21	Sp2 (ENSMUSG00000018678) #22	Pnpo (ENSMUSG00000018659) #23	Prr15l (ENSMUSG00000047040) #24	Cdk5rap3 (ENSMUSG00000018669) #25	Copz2 (ENSMUSG00000018672) #26	Nfe2l1 (ENSMUSG00000038615) #27	Cbx1 (ENSMUSG00000018666) #28	Snx11 (ENSMUSG00000020876) #29	Skap1 (ENSMUSG00000057058) #30	Hoxb1 (ENSMUSG00000018973) #31	Hoxb2 (ENSMUSG00000075588) #32	Hoxb3 (ENSMUSG00000048763) #33	Hoxb4 (ENSMUSG00000038692) #34	Hoxb5 (ENSMUSG00000038700) #35	Hoxb6 (ENSMUSG00000000690) #36	Hoxb7 (ENSMUSG00000038721) #37
Mus_C	ANCESTRAL SPECIES	3	ENSGT00940000157961.C #8	ENSGT00940000157982.b #9	ENSGT00800000125316	ENSGT00940000156314 #10	ENSGT00940000160776 #11	ENSGT00390000012679 #12	ENSGT00940000155246 #13	ENSGT00550000074898 #14	ENSGT00940000153704.B #15	ENSGT00940000160397 #16	ENSGT00940000157439 #17	ENSGT00390000000603 #18	ENSGT00940000161315 #19	ENSGT00390000013474.b.a #20	ENSGT00940000161498 #21	ENSGT00940000159590 #22	ENSGT00390000011219 #23	ENSGT00940000154534.a #24	ENSGT00390000000713 #25	ENSGT00390000004405.b #26	ENSGT00950000182892.a.b.a.a #27	ENSGT00940000153593.c.b.k	ENSGT00940000154152.d.b.dc.b #28	ENSGT00940000160113 #29	ENSGT00390000017856.b #30	ENSGT00940000159503 #31	ENSGT00940000155029.c.b #32	ENSGT00940000159774 #33	ENSGT00940000162072 #34	ENSGT00940000158354 #35	ENSGT00940000161108 #36
spretus	MODERN SPECIES	2	Srcin1 (MGP_SPRETEiJ_G0017903) #8	MGP_SPRETEiJ_G0017902	Arhgap23 (MGP_SPRETEiJ_G0017901) #9	Socs7 (MGP_SPRETEiJ_G0017900) #10	Gpr179 (MGP_SPRETEiJ_G0017899) #11	Mrpl45 (MGP_SPRETEiJ_G0017898) #12	Npepps (MGP_SPRETEiJ_G0017897) #13	Kpnb1 (MGP_SPRETEiJ_G0017896) #14	Tbkbp1 (MGP_SPRETEiJ_G0017895) #15	Tbx21 (MGP_SPRETEiJ_G0017894) #16	Osbpl7 (MGP_SPRETEiJ_G0017893) #17	Mrpl10 (MGP_SPRETEiJ_G0017892) #18	Lrrc46 (MGP_SPRETEiJ_G0017891) #19	Scrn2 (MGP_SPRETEiJ_G0017890) #20	Sp6 (MGP_SPRETEiJ_G0017889) #21	Sp2 (MGP_SPRETEiJ_G0017888) #22	Pnpo (MGP_SPRETEiJ_G0017887) #23	Prr15l (MGP_SPRETEiJ_G0017886) #24	Cdk5rap3 (MGP_SPRETEiJ_G0017885) #25	Copz2 (MGP_SPRETEiJ_G0017884) #26	Nfe2l1 (MGP_SPRETEiJ_G0017883) #27	MGP_SPRETEiJ_G0017882	Cbx1 (MGP_SPRETEiJ_G0017881) #28	Snx11 (MGP_SPRETEiJ_G0017880) #29	MGP_SPRETEiJ_G0017879 #30	Hoxb1 (MGP_SPRETEiJ_G0017878) #31	Hoxb2 (MGP_SPRETEiJ_G0017877) #32	Hoxb3 (MGP_SPRETEiJ_G0017876) #33	Hoxb4 (MGP_SPRETEiJ_G0017875) #34	Hoxb5 (MGP_SPRETEiJ_G0017874) #35	Hoxb6 (MGP_SPRETEiJ_G0017873) #36
Steppe mouse	MODERN SPECIES	3291	Srcin1 (ENSMSIG00000017360) #8	Arhgap23 (ENSMSIG00000017701) #9	ENSMSIG00000017794	Socs7 (ENSMSIG00000017810) #10	Gpr179 (ENSMSIG00000017852) #11	Mrpl45 (ENSMSIG00000017873) #12	Npepps (ENSMSIG00000017886) #13	Kpnb1 (ENSMSIG00000017971) #14	Tbkbp1 (ENSMSIG00000018040) #15	Tbx21 (ENSMSIG00000018069) #16	Osbpl7 (ENSMSIG00000018093) #17	Mrpl10 (ENSMSIG00000018160) #18	Lrrc46 (ENSMSIG00000018171) #19	Scrn2 (ENSMSIG00000018202) #20	Sp6 (ENSMSIG00000018223) #21	Sp2 (ENSMSIG00000018237) #22	ENSMSIG00000018267 #23	ENSMSIG00000018270 #24	Cdk5rap3 (ENSMSIG00000018309) #25	Copz2 (ENSMSIG00000018337) #26	Nfe2l1 (ENSMSIG00000018374) #27	Cbx1 (ENSMSIG00000018447) #28	ENSMSIG00000018520	Snx11 (ENSMSIG00000018546) #29	Skap1 (ENSMSIG00000018601) #30	Hoxb1 (ENSMSIG00000018752) #31	Hoxb2 (ENSMSIG00000018769) #32	Hoxb3 (ENSMSIG00000018771) #33	ENSMSIG00000018776	Hoxb4 (ENSMSIG00000018777) #34	Hoxb5 (ENSMSIG00000018787) #35
Ryukyu mouse	MODERN SPECIES	2	Srcin1 (MGP_CAROLIEiJ_G0017057) #8	MGP_CAROLIEiJ_G0017056	Arhgap23 (MGP_CAROLIEiJ_G0017055) #9	Socs7 (MGP_CAROLIEiJ_G0017054) #10	Gpr179 (MGP_CAROLIEiJ_G0017053) #11	Mrpl45 (MGP_CAROLIEiJ_G0017052) #12	Npepps (MGP_CAROLIEiJ_G0017051) #13	Kpnb1 (MGP_CAROLIEiJ_G0017050) #14	Tbkbp1 (MGP_CAROLIEiJ_G0017049) #15	Tbx21 (MGP_CAROLIEiJ_G0017048) #16	Osbpl7 (MGP_CAROLIEiJ_G0017047) #17	Mrpl10 (MGP_CAROLIEiJ_G0017046) #18	Lrrc46 (MGP_CAROLIEiJ_G0017045) #19	MGP_CAROLIEiJ_G0017044 #20	Sp6 (MGP_CAROLIEiJ_G0017043) #21	Sp2 (MGP_CAROLIEiJ_G0017042) #22	Pnpo (MGP_CAROLIEiJ_G0017041) #23	Prr15l (MGP_CAROLIEiJ_G0017040) #24	Cdk5rap3 (MGP_CAROLIEiJ_G0017039) #25	Copz2 (MGP_CAROLIEiJ_G0017038) #26	Nfe2l1 (MGP_CAROLIEiJ_G0017037) #27	MGP_CAROLIEiJ_G0017036	Cbx1 (MGP_CAROLIEiJ_G0017035) #28	Snx11 (MGP_CAROLIEiJ_G0017034) #29	Skap1 (MGP_CAROLIEiJ_G0017033) #30	Hoxb1 (MGP_CAROLIEiJ_G0017032) #31	Hoxb2 (MGP_CAROLIEiJ_G0017031) #32	Hoxb3 (MGP_CAROLIEiJ_G0017030) #33	Hoxb4 (MGP_CAROLIEiJ_G0017029) #34	Hoxb5 (MGP_CAROLIEiJ_G0017028) #35	Hoxb6 (MGP_CAROLIEiJ_G0017027) #36
Shrew mouse	MODERN SPECIES	5	Epop (MGP_PahariEiJ_G0018187)	Srcin1 (MGP_PahariEiJ_G0018186) #8	MGP_PahariEiJ_G0018185	Arhgap23 (MGP_PahariEiJ_G0018184) #9	Socs7 (MGP_PahariEiJ_G0018183) #10	Gpr179 (MGP_PahariEiJ_G0018182) #11	MGP_PahariEiJ_G0018181 #12	Npepps (MGP_PahariEiJ_G0018180) #13	Tbkbp1 (MGP_PahariEiJ_G0018179) #15	Tbx21 (MGP_PahariEiJ_G0018178) #16	Osbpl7 (MGP_PahariEiJ_G0018177) #17	Mrpl10 (MGP_PahariEiJ_G0018176) #18	Lrrc46 (MGP_PahariEiJ_G0018175) #19	Scrn2 (MGP_PahariEiJ_G0018174) #20	Sp6 (MGP_PahariEiJ_G0018173) #21	Sp2 (MGP_PahariEiJ_G0018172) #22	Pnpo (MGP_PahariEiJ_G0018171) #23	Prr15l (MGP_PahariEiJ_G0018170) #24	Cdk5rap3 (MGP_PahariEiJ_G0018169) #25	Copz2 (MGP_PahariEiJ_G0018168) #26	Nfe2l1 (MGP_PahariEiJ_G0018167) #27	MGP_PahariEiJ_G0018166	Cbx1 (MGP_PahariEiJ_G0018165) #28	Snx11 (MGP_PahariEiJ_G0018164) #29	Skap1 (MGP_PahariEiJ_G0018163) #30	Hoxb1 (MGP_PahariEiJ_G0018162) #31	Hoxb2 (MGP_PahariEiJ_G0018161) #32	Hoxb3 (MGP_PahariEiJ_G0018160) #33	Hoxb4 (MGP_PahariEiJ_G0018159) #34	Hoxb5 (MGP_PahariEiJ_G0018158) #35	Hoxb6 (MGP_PahariEiJ_G0018157) #36
Rat	MODERN SPECIES	1	Srcin1 (ENSRNOG00000011475) #8	Arhgap23 (ENSRNOG00000022771) #9	Socs7 (ENSRNOG00000059008) #10	Gpr179 (ENSRNOG00000029245) #11	Mrpl45 (ENSRNOG00000010540) #12	Npepps (ENSRNOG00000023095) #13	AABR07030425.1 (ENSRNOG00000056057)	Kpnb1 (ENSRNOG00000009275) #14	Tbkbp1 (ENSRNOG00000009370) #15	Tbx21 (ENSRNOG00000009427) #16	Osbpl7 (ENSRNOG00000009473) #17	Mrpl10 (ENSRNOG00000009567) #18	Lrrc46 (ENSRNOG00000009902) #19	Scrn2 (ENSRNOG00000010214) #20	Sp6 (ENSRNOG00000023551) #21	Sp2 (ENSRNOG00000010492) #22	Pnpo (ENSRNOG00000046493) #23	Prr15l (ENSRNOG00000049162) #24	Cdk5rap3 (ENSRNOG00000048747) #25	Copz2 (ENSRNOG00000009225) #26	Nfe2l1 (ENSRNOG00000008830) #27	Cbx1 (ENSRNOG00000008689) #28	Snx11 (ENSRNOG00000008642) #29	Skap1 (ENSRNOG00000023881) #30	Hoxb1 (ENSRNOG00000008506) #31	Hoxb2 (ENSRNOG00000008365) #32	Hoxb3 (ENSRNOG00000008313) #33	Hoxb4 (ENSRNOG00000008191) #34	Hoxb5 (ENSRNOG00000008010) #35	Hoxb6 (ENSRNOG00000007823) #36	Hoxb7 (ENSRNOG00000007611) #37
Upper Galilee mountains blind mole rat	MODERN SPECIES	1028	Hexim1 (ENSNGAG00000004671)	Hexim2 (ENSNGAG00000008154)	Fmnl1 (ENSNGAG00000018866)	Efcab15 (ENSNGAG00000014012)	Map3k14 (ENSNGAG00000018057)	Arhgap27 (ENSNGAG00000021239)	Plekhm1 (ENSNGAG00000013194)	Kpnb1 (ENSNGAG00000017610) #14	Tbkbp1 (ENSNGAG00000021163) #15	Tbx21 (ENSNGAG00000002476) #16	Osbpl7 (ENSNGAG00000019382) #17	Mrpl10 (ENSNGAG00000022195) #18	Lrrc46 (ENSNGAG00000022557) #19	Scrn2 (ENSNGAG00000023806) #20	Sp6 (ENSNGAG00000015868) #21	Sp2 (ENSNGAG00000017612) #22	Pnpo (ENSNGAG00000020016) #23	Prr15l (ENSNGAG00000021432) #24	ENSNGAG00000022529	ENSNGAG00000000747 #25	Copz2 (ENSNGAG00000023713) #26	Nfe2l1 (ENSNGAG00000000736) #27	Cbx1 (ENSNGAG00000006760) #28	Snx11 (ENSNGAG00000010446) #29	Skap1 (ENSNGAG00000012571) #30	Hoxb1 (ENSNGAG00000018593) #31	Hoxb2 (ENSNGAG00000019089) #32	Hoxb3 (ENSNGAG00000020227) #33	Hoxb4 (ENSNGAG00000021768) #34	Hoxb5 (ENSNGAG00000023238) #35	Hoxb6 (ENSNGAG00000000973) #36
Lesser Egyptian jerboa	MODERN SPECIES	56	Epop (ENSJJAG00000023234)	Srcin1 (ENSJJAG00000000573) #8	ENSJJAG00000002946 #9	Socs7 (ENSJJAG00000007563) #10	ENSJJAG00000002004 #11	ENSJJAG00000009505	Npepps (ENSJJAG00000005423) #13	Kpnb1 (ENSJJAG00000010909) #14	ENSJJAG00000010141 #15	Tbx21 (ENSJJAG00000000813) #16	Osbpl7 (ENSJJAG00000004477) #17	Mrpl10 (ENSJJAG00000004046) #18	Lrrc46 (ENSJJAG00000010412) #19	Scrn2 (ENSJJAG00000023635) #20	Sp6 (ENSJJAG00000006452) #21	Sp2 (ENSJJAG00000003061) #22	Pnpo (ENSJJAG00000023608) #23	Prr15l (ENSJJAG00000006478) #24	ENSJJAG00000002511 #25	Copz2 (ENSJJAG00000001025) #26	Nfe2l1 (ENSJJAG00000006432) #27	ENSJJAG00000007753 #28	ENSJJAG00000005754 #29	Skap1 (ENSJJAG00000003458) #30	Hoxb1 (ENSJJAG00000001073) #31	Hoxb2 (ENSJJAG00000009465) #32	Hoxb3 (ENSJJAG00000007804) #33	Hoxb4 (ENSJJAG00000002642) #34	Hoxb5 (ENSJJAG00000000763) #35	Hoxb6 (ENSJJAG00000000997) #36	Hoxb7 (ENSJJAG00000001284) #37
Kangaroo rat	MODERN SPECIES	326	1700001P01Rik (ENSDORG00000013037)	Cwc25 (ENSDORG00000003061)	Pip4k2b (ENSDORG00000009810)	Psmb3 (ENSDORG00000009809)	Pcgf2 (ENSDORG00000016581)	Cisd3 (ENSDORG00000029439)	Mllt6 (ENSDORG00000016578)	Srcin1 (ENSDORG00000007714) #8	ENSDORG00000007713 #9	Socs7 (ENSDORG00000028979) #10	Npepps (ENSDORG00000009627) #13	Tbx21 (ENSDORG00000013302) #16	Osbpl7 (ENSDORG00000002354) #17	Scrn2 (ENSDORG00000002361) #20	Sp6 (ENSDORG00000026201) #21	Sp2 (ENSDORG00000014109) #22	Pnpo (ENSDORG00000014110) #23	Prr15l (ENSDORG00000027427) #24	Copz2 (ENSDORG00000013441) #26	Nfe2l1 (ENSDORG00000000715) #27	Cbx1 (ENSDORG00000026399) #28	Snx11 (ENSDORG00000029078) #29	Hoxb1 (ENSDORG00000007896) #31	Hoxb2 (ENSDORG00000007897) #32	Hoxb3 (ENSDORG00000007898) #33	Hoxb4 (ENSDORG00000007899) #34	Hoxb5 (ENSDORG00000007900) #35	Hoxb6 (ENSDORG00000023877) #36	Hoxb7 (ENSDORG00000007905) #37	Hoxb8 (ENSDORG00000007906)	Hoxb9 (ENSDORG00000027423)
Rodentia_A	ANCESTRAL SPECIES	3	ENSGT00940000157961.C #8	ENSGT00860000135964 #7	ENSGT00940000157982.b #9	ENSGT00940000156314 #10	ENSGT00940000160776 #11	ENSGT00390000012679 #12	ENSGT00940000155246 #13	ENSGT00550000074898 #14	ENSGT00940000153704.B #15	ENSGT00940000160397 #16	ENSGT00940000157439 #17	ENSGT00390000000603 #18	ENSGT00940000161315 #19	ENSGT00390000013474.b.a #20	ENSGT00940000161498 #21	ENSGT00940000159590 #22	ENSGT00390000011219 #23	ENSGT00940000154534.a #24	ENSGT00390000000713 #25	ENSGT00390000004405.b #26	ENSGT00950000182892.a.b.a.a #27	ENSGT00940000154152.d.b.dc.b #28	ENSGT00940000160113 #29	ENSGT00390000017856.b #30	ENSGT00940000159503 #31	ENSGT00940000155029.c.b #32	ENSGT00940000159774 #33	ENSGT00940000162072 #34	ENSGT00940000158354 #35	ENSGT00940000161108 #36	ENSGT00940000161230 #37
Hystricomorpha	ANCESTRAL SPECIES	3	ENSGT00940000153451.a.a.a	ENSGT00940000157961.C #8	ENSGT00940000157982.b #9	ENSGT00940000156314 #10	ENSGT00940000160776 #11	ENSGT00390000012679 #12	ENSGT00940000155246 #13	ENSGT00550000074898 #14	ENSGT00940000153704.B #15	ENSGT00940000160397 #16	ENSGT00940000157439 #17	ENSGT00390000000603 #18	ENSGT00940000161315 #19	ENSGT00390000013474.b.a #20	ENSGT00940000161498 #21	ENSGT00940000159590 #22	ENSGT00390000011219 #23	ENSGT00940000154534.a #24	ENSGT00390000000713 #25	ENSGT00390000004405.b #26	ENSGT00950000182892.a.b.a.a #27	ENSGT00940000154152.d.b.dc.b #28	ENSGT00940000160113 #29	ENSGT00390000017856.b #30	ENSGT00940000159503 #31	ENSGT00940000155029.c.b #32	ENSGT00940000159774 #33	ENSGT00940000162072 #34	ENSGT00940000158354 #35	ENSGT00940000161108 #36	ENSGT00940000161230 #37
Hystricomorpha_a	ANCESTRAL SPECIES		ENSGT00940000153451.a.a.a	ENSGT00940000157961.C #8	ENSGT00940000157982.b #9	ENSGT00940000156314 #10	ENSGT00940000160776 #11	ENSGT00390000012679 #12	ENSGT00940000155246 #13	ENSGT00550000074898 #14	ENSGT00940000153704.B #15	ENSGT00940000160397 #16	ENSGT00940000157439 #17	ENSGT00390000000603 #18	ENSGT00940000161315 #19	ENSGT00390000013474.b.a #20	ENSGT00940000161498 #21	ENSGT00940000159590 #22	ENSGT00390000011219 #23	ENSGT00940000154534.a #24	ENSGT00390000000713 #25	ENSGT00390000004405.b #26	ENSGT00950000182892.a.b.a.a #27	ENSGT00940000154152.d.b.dc.b #28	ENSGT00940000160113 #29	ENSGT00390000017856.b #30	ENSGT00940000159503 #31	ENSGT00940000155029.c.b #32	ENSGT00940000159774 #33	ENSGT00940000162072 #34	ENSGT00940000158354 #35	ENSGT00940000161108 #36	ENSGT00940000161230 #37
Hystricomorpha_b	ANCESTRAL SPECIES		ENSGT00940000158572	ENSGT00940000157961.C #8	ENSGT00940000157982.b #9	ENSGT00940000156314 #10	ENSGT00940000160776 #11	ENSGT00390000012679 #12	ENSGT00940000155246 #13	ENSGT00550000074898 #14	ENSGT00940000153704.B #15	ENSGT00940000160397 #16	ENSGT00940000157439 #17	ENSGT00390000000603 #18	ENSGT00940000161315 #19	ENSGT00390000013474.b.a #20	ENSGT00940000161498 #21	ENSGT00940000159590 #22	ENSGT00390000011219 #23	ENSGT00940000154534.a #24	ENSGT00390000000713 #25	ENSGT00390000004405.b #26	ENSGT00950000182892.a.b.a.a #27	ENSGT00940000154152.d.b.dc.b #28	ENSGT00940000160113 #29	ENSGT00390000017856.b #30	ENSGT00940000159503 #31	ENSGT00940000155029.c.b #32	ENSGT00940000159774 #33	ENSGT00940000162072 #34	ENSGT00940000158354 #35	ENSGT00940000161108 #36	ENSGT00940000161230 #37
Long-tailed chinchilla	MODERN SPECIES	158	MLLT6 (ENSCLAG00000013781)	SRCIN1 (ENSCLAG00000015589) #8	ARHGAP23 (ENSCLAG00000014290) #9	SOCS7 (ENSCLAG00000015232) #10	GPR179 (ENSCLAG00000014803) #11	MRPL45 (ENSCLAG00000015324) #12	NPEPPS (ENSCLAG00000016661) #13	KPNB1 (ENSCLAG00000017091) #14	ENSCLAG00000015338 #15	TBX21 (ENSCLAG00000015235) #16	OSBPL7 (ENSCLAG00000014839) #17	MRPL10 (ENSCLAG00000015400) #18	SCRN2 (ENSCLAG00000013965) #20	LRRC46 (ENSCLAG00000016713) #19	SP6 (ENSCLAG00000016276) #21	SP2 (ENSCLAG00000014115) #22	PNPO (ENSCLAG00000013871) #23	PRR15L (ENSCLAG00000017903) #24	CDK5RAP3 (ENSCLAG00000012292) #25	COPZ2 (ENSCLAG00000013544) #26	NFE2L1 (ENSCLAG00000014836) #27	CBX1 (ENSCLAG00000013587) #28	SNX11 (ENSCLAG00000015837) #29	SKAP1 (ENSCLAG00000015423) #30	HOXB1 (ENSCLAG00000013047) #31	HOXB2 (ENSCLAG00000015271) #32	HOXB3 (ENSCLAG00000015322) #33	HOXB4 (ENSCLAG00000014725) #34	HOXB5 (ENSCLAG00000014374) #35	HOXB6 (ENSCLAG00000015524) #36	HOXB7 (ENSCLAG00000014906) #37
Degu	MODERN SPECIES	97	MLLT6 (ENSODEG00000017604)	SRCIN1 (ENSODEG00000017506) #8	ARHGAP23 (ENSODEG00000017612) #9	GPR179 (ENSODEG00000017327) #11	MRPL45 (ENSODEG00000017631) #12	SOCS7 (ENSODEG00000017559) #10	NPEPPS (ENSODEG00000017337) #13	KPNB1 (ENSODEG00000017287) #14	ENSODEG00000017455 #15	TBX21 (ENSODEG00000017610) #16	OSBPL7 (ENSODEG00000017364) #17	MRPL10 (ENSODEG00000017536) #18	LRRC46 (ENSODEG00000017367) #19	SCRN2 (ENSODEG00000017395) #20	SP6 (ENSODEG00000017625) #21	SP2 (ENSODEG00000017126) #22	PNPO (ENSODEG00000017424) #23	ENSODEG00000017229 #25	COPZ2 (ENSODEG00000017565) #26	ENSODEG00000020421	NFE2L1 (ENSODEG00000017348) #27	CBX1 (ENSODEG00000017272) #28	SNX11 (ENSODEG00000017458) #29	SKAP1 (ENSODEG00000017533) #30	HOXB1 (ENSODEG00000017050) #31	HOXB2 (ENSODEG00000017153) #32	HOXB3 (ENSODEG00000017116) #33	HOXB4 (ENSODEG00000017038) #34	HOXB5 (ENSODEG00000017253) #35	HOXB6 (ENSODEG00000016988) #36	HOXB8 (ENSODEG00000017119)
Guinea pig	MODERN SPECIES	53	EPOP (ENSCPOG00000026798)	SRCIN1 (ENSCPOG00000022478) #8	ARHGAP23 (ENSCPOG00000025821) #9	SOCS7 (ENSCPOG00000011473) #10	GPR179 (ENSCPOG00000027503) #11	MRPL45 (ENSCPOG00000001574) #12	NPEPPS (ENSCPOG00000006559) #13	KPNB1 (ENSCPOG00000006566) #14	TBKBP1 (ENSCPOG00000036345) #15	TBX21 (ENSCPOG00000026273) #16	OSBPL7 (ENSCPOG00000006914) #17	MRPL10 (ENSCPOG00000037104) #18	LRRC46 (ENSCPOG00000006925) #19	SCRN2 (ENSCPOG00000006929) #20	SP6 (ENSCPOG00000007638) #21	SP2 (ENSCPOG00000014943) #22	PNPO (ENSCPOG00000003187) #23	PRR15L (ENSCPOG00000035567) #24	CDK5RAP3 (ENSCPOG00000007275) #25	COPZ2 (ENSCPOG00000019500) #26	NFE2L1 (ENSCPOG00000030805) #27	CBX1 (ENSCPOG00000034435) #28	SNX11 (ENSCPOG00000020234) #29	SKAP1 (ENSCPOG00000022118) #30	HOXB1 (ENSCPOG00000022183) #31	HOXB2 (ENSCPOG00000035468) #32	ENSCPOG00000010107 #33	ENSCPOG00000010105	HOXB5 (ENSCPOG00000030746) #35	HOXB6 (ENSCPOG00000040707) #36	HOXB9 (ENSCPOG00000037597)
Naked mole-rat female	MODERN SPECIES	12	SRCIN1 (ENSHGLG00000010912) #8	ARHGAP23 (ENSHGLG00000012944) #9	SOCS7 (ENSHGLG00000035093) #10	ENSHGLG00000041148 #11	ENSHGLG00000050482	ENSHGLG00000010863 #12	ENSHGLG00000012466 #13	KPNB1 (ENSHGLG00000014138) #14	TBKBP1 (ENSHGLG00000049817) #15	TBX21 (ENSHGLG00000012216) #16	OSBPL7 (ENSHGLG00000012525) #17	MRPL10 (ENSHGLG00000048399) #18	LRRC46 (ENSHGLG00000035931) #19	SCRN2 (ENSHGLG00000041375) #20	SP6 (ENSHGLG00000021113) #21	SP2 (ENSHGLG00000009902) #22	PNPO (ENSHGLG00000013159) #23	PRR15L (ENSHGLG00000014696) #24	CDK5RAP3 (ENSHGLG00000019464) #25	COPZ2 (ENSHGLG00000018543) #26	NFE2L1 (ENSHGLG00000012592) #27	CBX1 (ENSHGLG00000013574) #28	SNX11 (ENSHGLG00000016837) #29	SKAP1 (ENSHGLG00000014563) #30	HOXB1 (ENSHGLG00000009781) #31	HOXB2 (ENSHGLG00000010090) #32	HOXB3 (ENSHGLG00000010686) #33	HOXB4 (ENSHGLG00000034075) #34	HOXB5 (ENSHGLG00000039265) #35	HOXB6 (ENSHGLG00000012400) #36	HOXB7 (ENSHGLG00000045318) #37
Sciuridae	ANCESTRAL SPECIES	4	ENSGT00940000157961.C #8	ENSGT00860000135964 #7	ENSGT00940000157982.b #9	ENSGT00940000156314 #10	ENSGT00940000160776 #11	ENSGT00390000012679 #12	ENSGT00940000155246 #13	ENSGT00550000074898 #14	ENSGT00940000153704.B #15	ENSGT00940000160397 #16	ENSGT00940000157439 #17	ENSGT00390000000603 #18	ENSGT00940000161315 #19	ENSGT00390000013474.b.a #20	ENSGT00940000161498 #21	ENSGT00940000159590 #22	ENSGT00390000011219 #23	ENSGT00940000154534.a #24	ENSGT00390000000713 #25	ENSGT00390000004405.b #26	ENSGT00950000182892.a.b.a.a #27	ENSGT00940000154152.d.b.dc.b #28	ENSGT00940000160113 #29	ENSGT00390000017856.b #30	ENSGT00940000159503 #31	ENSGT00940000155029.c.b #32	ENSGT00940000159774 #33	ENSGT00940000162072 #34	ENSGT00940000158354 #35	ENSGT00940000161108 #36	ENSGT00940000161230 #37
Marmotini	ANCESTRAL SPECIES	8	ENSGT00940000157961.C #8	ENSGT00860000135964 #7	ENSGT00940000157982.b #9	ENSGT00940000156314 #10	ENSGT00940000160776 #11	ENSGT00390000012679.o #12	ENSGT00940000155246 #13	ENSGT00550000074898 #14	ENSGT00940000153704.B #15	ENSGT00940000160397 #16	ENSGT00940000157439 #17	ENSGT00390000000603 #18	ENSGT00940000161315 #19	ENSGT00390000013474.b.a #20	ENSGT00940000161498 #21	ENSGT00940000159590 #22	ENSGT00390000011219 #23	ENSGT00940000154534.a #24	ENSGT00390000000713 #25	ENSGT00390000004405.b #26	ENSGT00950000182892.a.b.a.a #27	ENSGT00940000154152.d.b.dc.b #28	ENSGT00940000160113 #29	ENSGT00390000017856.b #30	ENSGT00940000159503 #31	ENSGT00940000155029.c.b #32	ENSGT00940000159774 #33	ENSGT00940000162072 #34	ENSGT00940000158354 #35	ENSGT00940000161108 #36	ENSGT00940000161230 #37
Marmotini_b	ANCESTRAL SPECIES	5	ENSGT00940000153451.a.a.a	ENSGT00940000157961.C #8	ENSGT00940000157982.b #9	ENSGT00940000156314 #10	ENSGT00940000160776 #11	ENSGT00390000012679.o #12	ENSGT00940000155246 #13	ENSGT00550000074898 #14	ENSGT00940000153704.B #15	ENSGT00940000160397 #16	ENSGT00940000157439 #17	ENSGT00390000000603 #18	ENSGT00940000161315 #19	ENSGT00390000013474.b.a #20	ENSGT00940000161498 #21	ENSGT00940000159590 #22	ENSGT00390000011219 #23	ENSGT00940000154534.a #24	ENSGT00390000000713 #25	ENSGT00390000004405.b #26	ENSGT00950000182892.a.b.a.a #27	ENSGT00940000154152.d.b.dc.b #28	ENSGT00940000160113 #29	ENSGT00390000017856.b #30	ENSGT00940000159503 #31	ENSGT00940000155029.c.b #32	ENSGT00940000159774 #33	ENSGT00940000162072 #34	ENSGT00940000158354 #35	ENSGT00940000161108 #36	ENSGT00940000161230 #37
Squirrel	MODERN SPECIES	90	EPOP (ENSSTOG00000022964)	SRCIN1 (ENSSTOG00000028994) #8	ARHGAP23 (ENSSTOG00000029240) #9	SOCS7 (ENSSTOG00000000068) #10	GPR179 (ENSSTOG00000024299) #11	ENSSTOG00000000304 #12	NPEPPS (ENSSTOG00000004901) #13	KPNB1 (ENSSTOG00000007896) #14	TBKBP1 (ENSSTOG00000023713) #15	TBX21 (ENSSTOG00000001626) #16	OSBPL7 (ENSSTOG00000001636) #17	MRPL10 (ENSSTOG00000024617) #18	LRRC46 (ENSSTOG00000002068) #19	SCRN2 (ENSSTOG00000027108) #20	SP6 (ENSSTOG00000001607) #21	SP2 (ENSSTOG00000015926) #22	PNPO (ENSSTOG00000006221) #23	PRR15L (ENSSTOG00000006235) #24	CDK5RAP3 (ENSSTOG00000006244) #25	ENSSTOG00000027550 #26	NFE2L1 (ENSSTOG00000013664) #27	CBX1 (ENSSTOG00000023986) #28	SNX11 (ENSSTOG00000013684) #29	SKAP1 (ENSSTOG00000013692) #30	HOXB1 (ENSSTOG00000028630) #31	HOXB2 (ENSSTOG00000023586) #32	HOXB3 (ENSSTOG00000025093) #33	HOXB4 (ENSSTOG00000009734) #34	HOXB5 (ENSSTOG00000009740) #35	HOXB6 (ENSSTOG00000020303) #36	HOXB7 (ENSSTOG00000025657) #37
Arctic ground squirrel	MODERN SPECIES	46	MLLT6 (ENSUPAG00010006969)	SRCIN1 (ENSUPAG00010006849) #8	ARHGAP23 (ENSUPAG00010006763) #9	SOCS7 (ENSUPAG00010006716) #10	GPR179 (ENSUPAG00010006698) #11	ENSUPAG00010006685 #12	NPEPPS (ENSUPAG00010006649) #13	KPNB1 (ENSUPAG00010006624) #14	TBKBP1 (ENSUPAG00010006591) #15	TBX21 (ENSUPAG00010006582) #16	OSBPL7 (ENSUPAG00010006545) #17	MRPL10 (ENSUPAG00010006539) #18	LRRC46 (ENSUPAG00010006533) #19	SCRN2 (ENSUPAG00010006526) #20	SP6 (ENSUPAG00010006522) #21	SP2 (ENSUPAG00010006507) #22	PNPO (ENSUPAG00010006483) #23	PRR15L (ENSUPAG00010006473) #24	CDK5RAP3 (ENSUPAG00010006466) #25	COPZ2 (ENSUPAG00010006455) #26	NFE2L1 (ENSUPAG00010006396) #27	CBX1 (ENSUPAG00010006381) #28	SNX11 (ENSUPAG00010006370) #29	SKAP1 (ENSUPAG00010006345) #30	HOXB1 (ENSUPAG00010006340) #31	HOXB2 (ENSUPAG00010006336) #32	HOXB3 (ENSUPAG00010006328) #33	HOXB4 (ENSUPAG00010006325) #34	HOXB5 (ENSUPAG00010006320) #35	HOXB6 (ENSUPAG00010006317) #36	HOXB7 (ENSUPAG00010006312) #37
Alpin marmot	MODERN SPECIES	126	ENSMMMG00000020172 #7	ARHGAP23 (ENSMMMG00000020178) #9	SOCS7 (ENSMMMG00000020236) #10	GPR179 (ENSMMMG00000020262) #11	ENSMMMG00000020288 #12	NPEPPS (ENSMMMG00000020297) #13	KPNB1 (ENSMMMG00000020318) #14	ENSMMMG00000020322 #15	TBX21 (ENSMMMG00000020329) #16	ENSMMMG00000020333	OSBPL7 (ENSMMMG00000020336) #17	MRPL10 (ENSMMMG00000020352) #18	LRRC46 (ENSMMMG00000020356) #19	SCRN2 (ENSMMMG00000020372) #20	SP6 (ENSMMMG00000020386) #21	SP2 (ENSMMMG00000020394) #22	PNPO (ENSMMMG00000020407) #23	PRR15L (ENSMMMG00000020424) #24
Eurasian red squirrel	DUPLICATION
Eurasian red squirrel	MODERN SPECIES	12	SRCIN1 (ENSSVLG00005016103) #8	ARHGAP23 (ENSSVLG00005016593) #9	SOCS7 (ENSSVLG00005016676) #10	GPR179 (ENSSVLG00005016761) #11	ENSSVLG00005017021	MRPL45 (ENSSVLG00005017084) #12	NPEPPS (ENSSVLG00005017198) #13	KPNB1 (ENSSVLG00005017557) #14	TBKBP1 (ENSSVLG00005017602) #15	TBX21 (ENSSVLG00005017653) #16	OSBPL7 (ENSSVLG00005017757) #17	MRPL10 (ENSSVLG00005017985) #18	LRRC46 (ENSSVLG00005018036) #19	SCRN2 (ENSSVLG00005018077) #20	SP6 (ENSSVLG00005018194) #21	ENSSVLG00005018218 #22	PNPO (ENSSVLG00005018295) #23	PRR15L (ENSSVLG00005018399) #24	CDK5RAP3 (ENSSVLG00005018459) #25	COPZ2 (ENSSVLG00005018641) #26	NFE2L1 (ENSSVLG00005018798) #27	CBX1 (ENSSVLG00005019034) #28	SNX11 (ENSSVLG00005019122) #29	SKAP1 (ENSSVLG00005019232) #30	HOXB1 (ENSSVLG00005019304) #31	HOXB2 (ENSSVLG00005019378) #32	HOXB3 (ENSSVLG00005019421) #33	HOXB4 (ENSSVLG00005019455) #34	HOXB5 (ENSSVLG00005019546) #35	HOXB6 (ENSSVLG00005019586) #36	HOXB7 (ENSSVLG00005019618) #37
Eurasian red squirrel	MODERN SPECIES	8	CABP5 (ENSSVLG00005015933)	ENSSVLG00005016000	ELSPBP1 (ENSSVLG00005016038)	BSPH1 (ENSSVLG00005016144)	ENSSVLG00005016193	PLA2G4C (ENSSVLG00005016365)	LIG1 (ENSSVLG00005016507)	ZSWIM9 (ENSSVLG00005016795)	ENSSVLG00005016818	ENSSVLG00005016867	ENSSVLG00005016918	ENSSVLG00005016954	ENSSVLG00005016972	ENSSVLG00005017037	ENSSVLG00005017076	ENSSVLG00005017091 #22	ENSSVLG00005017112	ENSSVLG00005017163	EMP3 (ENSSVLG00005017530)	TMEM143 (ENSSVLG00005017613)	SYNGR4 (ENSSVLG00005017908)	ENSSVLG00005017961	GRIN2D (ENSSVLG00005018033)	GRWD1 (ENSSVLG00005018183)	KCNJ14 (ENSSVLG00005018257)	CYTH2 (ENSSVLG00005018286)	LMTK3 (ENSSVLG00005018367)	SULT2B1 (ENSSVLG00005018677)	FAM83E (ENSSVLG00005018800)	SPACA4 (ENSSVLG00005018869)	ENSSVLG00005018906
Lagomorpha	ANCESTRAL SPECIES		ENSGT00940000158572	ENSGT00940000157961.C #8	ENSGT00940000157982.b #9	ENSGT00940000156314 #10	ENSGT00940000160776 #11	ENSGT00390000012679 #12	ENSGT00940000155246 #13	ENSGT00550000074898 #14	ENSGT00940000153704.B #15	ENSGT00940000160397 #16	ENSGT00940000157439 #17	ENSGT00390000000603 #18	ENSGT00940000161315 #19	ENSGT00390000013474.b.a #20	ENSGT00940000161498 #21	ENSGT00940000159590 #22	ENSGT00390000011219 #23	ENSGT00940000154534.a #24	ENSGT00390000000713 #25	ENSGT00390000004405.b #26	ENSGT00950000182892.a.b.a.a #27	ENSGT00940000154152.d.b.dc #28	ENSGT00940000160113 #29	ENSGT00390000017856.b #30	ENSGT00940000159503 #31	ENSGT00940000155029.c.b #32	ENSGT00940000159774 #33	ENSGT00940000158354 #35	ENSGT00940000161108 #36	ENSGT00940000161529	ENSGT00940000161386
Rabbit	MODERN SPECIES	10	MLLT6 (ENSOCUG00000027604)	SRCIN1 (ENSOCUG00000005505) #8	ARHGAP23 (ENSOCUG00000011758) #9	SOCS7 (ENSOCUG00000015724) #10	GPR179 (ENSOCUG00000015704) #11	MRPL45 (ENSOCUG00000015690) #12	NPEPPS (ENSOCUG00000015748) #13	KPNB1 (ENSOCUG00000015425) #14	TBKBP1 (ENSOCUG00000014771) #15	TBX21 (ENSOCUG00000012907) #16	OSBPL7 (ENSOCUG00000009447) #17	MRPL10 (ENSOCUG00000009452) #18	LRRC46 (ENSOCUG00000009453) #19	SCRN2 (ENSOCUG00000009457) #20	SP6 (ENSOCUG00000023482) #21	SP2 (ENSOCUG00000027415) #22	PNPO (ENSOCUG00000017484) #23	PRR15L (ENSOCUG00000017489) #24	CDK5RAP3 (ENSOCUG00000012325) #25	COPZ2 (ENSOCUG00000001802) #26	NFE2L1 (ENSOCUG00000022298) #27	CBX1 (ENSOCUG00000008021) #28	SNX11 (ENSOCUG00000002309) #29	SKAP1 (ENSOCUG00000001717) #30	HOXB1 (ENSOCUG00000001720) #31	HOXB2 (ENSOCUG00000024951) #32	HOXB3 (ENSOCUG00000023337) #33	HOXB6 (ENSOCUG00000011560) #36	HOXB5 (ENSOCUG00000023093) #35	HOXB8 (ENSOCUG00000029186)	HOXB9 (ENSOCUG00000027316)
Pika	MODERN SPECIES	633							NPEPPS (ENSOPRG00000003735) #13	KPNB1 (ENSOPRG00000003795) #14	TBKBP1 (ENSOPRG00000003843) #15	TBX21 (ENSOPRG00000003888) #16	OSBPL7 (ENSOPRG00000003904) #17	MRPL10 (ENSOPRG00000003949) #18	LRRC46 (ENSOPRG00000003963) #19	SCRN2 (ENSOPRG00000003992) #20	SP6 (ENSOPRG00000004019) #21	SP2 (ENSOPRG00000004048) #22	PNPO (ENSOPRG00000004080) #23	CDK5RAP3 (ENSOPRG00000004107) #25
Atlantogenata	ANCESTRAL SPECIES	1	ENSGT00940000153451.a.a.a	ENSGT00940000157961.C #8	ENSGT00940000157982.b #9	ENSGT00940000156314 #10	ENSGT00940000160776 #11	ENSGT00390000012679 #12	ENSGT00940000155246 #13	ENSGT00550000074898 #14	ENSGT00940000153704.B #15	ENSGT00940000160397 #16	ENSGT00940000157439 #17	ENSGT00390000000603 #18	ENSGT00940000161315 #19	ENSGT00390000013474.b.a #20	ENSGT00940000161498 #21	ENSGT00940000159590 #22	ENSGT00390000011219 #23	ENSGT00940000154534.a #24	ENSGT00390000000713 #25	ENSGT00390000004405.b #26	ENSGT00950000182892.a.b.a.a #27	ENSGT00940000154152.d #28	ENSGT00940000160113 #29	ENSGT00390000017856.b #30	ENSGT00940000159503 #31	ENSGT00940000155029.c.b #32	ENSGT00940000159774 #33	ENSGT00940000162072 #34	ENSGT00940000158354 #35	ENSGT00940000161108 #36	ENSGT00940000161230 #37
Xenarthra	ANCESTRAL SPECIES	258										ENSGT00940000160397 #16	ENSGT00940000157439 #17	ENSGT00390000000603 #18	ENSGT00940000161315 #19	ENSGT00390000013474.b.a #20	ENSGT00940000161498 #21	ENSGT00940000159590 #22	ENSGT00390000011219 #23	ENSGT00940000154534.a #24	ENSGT00390000000713 #25	ENSGT00390000004405.b #26	ENSGT00950000182892.a.b.a.a #27	ENSGT00940000154152.d #28	ENSGT00940000160113 #29	ENSGT00390000017856.b #30
Sloth	MODERN SPECIES	5533																SP2 (ENSCHOG00000008313) #22
Armadillo	MODERN SPECIES	825										ENSDNOG00000045438 #16	OSBPL7 (ENSDNOG00000033308) #17	MRPL10 (ENSDNOG00000024176) #18	LRRC46 (ENSDNOG00000047964) #19	SCRN2 (ENSDNOG00000034719) #20	SP6 (ENSDNOG00000042665) #21	SP2 (ENSDNOG00000013944) #22	PNPO (ENSDNOG00000032160) #23	PRR15L (ENSDNOG00000008323) #24	CDK5RAP3 (ENSDNOG00000030779) #25	COPZ2 (ENSDNOG00000037475) #26	NFE2L1 (ENSDNOG00000047006) #27	CBX1 (ENSDNOG00000040249) #28	SNX11 (ENSDNOG00000032877) #29	SKAP1 (ENSDNOG00000039133) #30
Afrotheria	ANCESTRAL SPECIES	2	ENSGT00940000153451.a.a.a	ENSGT00940000157961.C #8	ENSGT00940000157982.b #9	ENSGT00940000156314 #10	ENSGT00940000160776 #11	ENSGT00390000012679 #12	ENSGT00940000155246 #13	ENSGT00550000074898 #14	ENSGT00940000153704.B #15	ENSGT00940000160397 #16	ENSGT00940000157439 #17	ENSGT00390000000603 #18	ENSGT00940000161315 #19	ENSGT00390000013474.b.a #20	ENSGT00940000161498 #21	ENSGT00940000159590 #22	ENSGT00390000011219 #23	ENSGT00940000154534.a #24	ENSGT00390000000713 #25	ENSGT00390000004405.b #26	ENSGT00950000182892.a.b.a.a #27	ENSGT00940000154152.d #28	ENSGT00940000160113 #29	ENSGT00390000017856.b #30	ENSGT00940000159503 #31	ENSGT00940000155029.c.b #32	ENSGT00940000159774 #33	ENSGT00940000162072 #34	ENSGT00940000158354 #35	ENSGT00940000161108 #36	ENSGT00940000161230 #37
Tenrec	MODERN SPECIES	3741																SP2 (ENSETEG00000009168) #22
Afrotheria_a	ANCESTRAL SPECIES	2	ENSGT00940000153451.a.a.a	ENSGT00940000157961.C #8	ENSGT00940000157982.b #9	ENSGT00940000156314 #10	ENSGT00940000160776 #11	ENSGT00390000012679 #12	ENSGT00940000155246 #13	ENSGT00550000074898 #14	ENSGT00940000153704.B #15	ENSGT00940000160397 #16	ENSGT00940000157439 #17	ENSGT00390000000603 #18	ENSGT00940000161315 #19	ENSGT00390000013474.b.a #20	ENSGT00940000161498 #21	ENSGT00940000159590 #22	ENSGT00390000011219 #23	ENSGT00940000154534.a #24	ENSGT00390000000713 #25	ENSGT00390000004405.b #26	ENSGT00950000182892.a.b.a.a #27	ENSGT00940000154152.d #28	ENSGT00940000160113 #29	ENSGT00390000017856.b #30	ENSGT00940000159503 #31	ENSGT00940000155029.c.b #32	ENSGT00940000159774 #33	ENSGT00940000162072 #34	ENSGT00940000158354 #35	ENSGT00940000161108 #36	ENSGT00940000161230 #37
Elephant	MODERN SPECIES	310	EPOP (ENSLAFG00000023127)	SRCIN1 (ENSLAFG00000012974) #8	ARHGAP23 (ENSLAFG00000028622) #9	SOCS7 (ENSLAFG00000015279) #10	ENSLAFG00000015267 #11	MRPL45 (ENSLAFG00000014050) #12	NPEPPS (ENSLAFG00000001325) #13	KPNB1 (ENSLAFG00000001328) #14	TBKBP1 (ENSLAFG00000001330) #15	TBX21 (ENSLAFG00000028463) #16	OSBPL7 (ENSLAFG00000006819) #17	MRPL10 (ENSLAFG00000028127) #18	LRRC46 (ENSLAFG00000006826) #19	SCRN2 (ENSLAFG00000025964) #20	SP6 (ENSLAFG00000010701) #21	SP2 (ENSLAFG00000021817) #22	PNPO (ENSLAFG00000015550) #23	PRR15L (ENSLAFG00000015553) #24	CDK5RAP3 (ENSLAFG00000000339) #25	ENSLAFG00000030284	ENSLAFG00000015209 #26	NFE2L1 (ENSLAFG00000018523) #27	CBX1 (ENSLAFG00000018526) #28	SNX11 (ENSLAFG00000018529) #29	SKAP1 (ENSLAFG00000018530) #30	ENSLAFG00000031610 #31	HOXB2 (ENSLAFG00000030161) #32	ENSLAFG00000030505	HOXB3 (ENSLAFG00000030335) #33	HOXB4 (ENSLAFG00000013588) #34	HOXB5 (ENSLAFG00000013590) #35
Hyrax	MODERN SPECIES	4555												OSBPL7 (ENSPCAG00000001932) #17	ENSPCAG00000002027	LRRC46 (ENSPCAG00000002042) #19	SCRN2 (ENSPCAG00000002092) #20	SP2 (ENSPCAG00000002140) #22	PNPO (ENSPCAG00000002196) #23	PRR15L (ENSPCAG00000002248) #24	CDK5RAP3 (ENSPCAG00000002257) #25	COPZ2 (ENSPCAG00000002327) #26	CBX1 (ENSPCAG00000002381) #28
Marsupialia	ANCESTRAL SPECIES	13	ENSGT00940000153451.a.a.a	ENSGT00940000157961.C #8	ENSGT00940000157982.b #9	ENSGT00940000156314 #10	ENSGT00940000160776 #11	ENSGT00390000012679 #12	ENSGT00940000155246 #13	ENSGT00550000074898 #14	ENSGT00940000153704.B #15	ENSGT00940000160397.b #16	ENSGT00940000157439 #17	ENSGT00390000000603 #18	ENSGT00940000161315 #19	ENSGT00390000013474.b.a #20	ENSGT00940000161498 #21	ENSGT00940000159590 #22	ENSGT00640000092844	ENSGT00390000011219 #23	ENSGT00940000154534.a #24	ENSGT00390000000713 #25	ENSGT00390000004405.b #26	ENSGT00950000182892.a.b.a.a #27	ENSGT00940000154152.d #28	ENSGT00940000160113 #29	ENSGT00390000017856.b #30	ENSGT00940000159503 #31	ENSGT00940000155029.c.b #32	ENSGT00940000159774 #33	ENSGT00940000162072 #34	ENSGT00940000158354 #35	ENSGT00940000161108 #36
Opossum	MODERN SPECIES	1	ENSMODG00000012582	SRCIN1 (ENSMODG00000012577) #8	ARHGAP23 (ENSMODG00000012570) #9	SOCS7 (ENSMODG00000012566) #10	GPR179 (ENSMODG00000012564) #11	MRPL45 (ENSMODG00000012560) #12	NPEPPS (ENSMODG00000012557) #13	KPNB1 (ENSMODG00000012505) #14	ENSMODG00000039000 #15	ENSMODG00000012526 #16	OSBPL7 (ENSMODG00000012518) #17	MRPL10 (ENSMODG00000038269) #18	LRRC46 (ENSMODG00000012473) #19	SCRN2 (ENSMODG00000012467) #20	SP6 (ENSMODG00000012454) #21	SP2 (ENSMODG00000012452) #22	ENSMODG00000050066	PNPO (ENSMODG00000012446) #23	PRR15L (ENSMODG00000024090) #24	CDK5RAP3 (ENSMODG00000012439) #25	COPZ2 (ENSMODG00000012424) #26	NFE2L1 (ENSMODG00000012375) #27	CBX1 (ENSMODG00000012368) #28	SNX11 (ENSMODG00000051179) #29	SKAP1 (ENSMODG00000012360) #30	HOXB1 (ENSMODG00000046816) #31	HOXB2 (ENSMODG00000012347) #32	HOXB3 (ENSMODG00000012344) #33	HOXB4 (ENSMODG00000042083) #34	HOXB5 (ENSMODG00000012338) #35	HOXB6 (ENSMODG00000012334) #36
Marsupialia_b	ANCESTRAL SPECIES	16	ENSGT00940000153451.a.a.a	ENSGT00940000157961.C #8	ENSGT00940000157982.b #9	ENSGT00940000156314 #10	ENSGT00940000160776 #11	ENSGT00390000012679 #12	ENSGT00940000155246 #13	ENSGT00550000074898 #14	ENSGT00940000153704.B #15	ENSGT00940000160397.b #16	ENSGT00940000157439 #17	ENSGT00390000000603 #18	ENSGT00940000161315 #19	ENSGT00390000013474.b.a #20	ENSGT00940000161498 #21	ENSGT00940000159590 #22	ENSGT00640000092844	ENSGT00390000011219 #23	ENSGT00940000154534.a #24	ENSGT00390000000713 #25	ENSGT00390000004405.b #26	ENSGT00950000182892.a.b.a.a #27	ENSGT00940000154152.d #28	ENSGT00940000160113 #29	ENSGT00390000017856.b #30	ENSGT00940000159503 #31	ENSGT00940000155029.c.b #32	ENSGT00940000159774 #33	ENSGT00940000162072 #34	ENSGT00940000158354 #35	ENSGT00940000161108 #36
Diprotodontia	ANCESTRAL SPECIES	9	ENSGT00940000153451.a.a.a	ENSGT00940000157961.C #8	ENSGT00940000157982.b #9	ENSGT00940000156314 #10	ENSGT00940000160776 #11	ENSGT00390000012679 #12	ENSGT00940000155246 #13	ENSGT00550000074898 #14	ENSGT00940000153704.B #15	ENSGT00940000160397.b #16	ENSGT00940000157439 #17	ENSGT00390000000603 #18	ENSGT00940000161315 #19	ENSGT00390000013474.b.a #20	ENSGT00940000161498 #21	ENSGT00940000159590 #22	ENSGT00640000092844	ENSGT00390000011219 #23	ENSGT00940000154534.a #24	ENSGT00390000000713 #25	ENSGT00390000004405.b #26	ENSGT00950000182892.a.b.a.a #27	ENSGT00940000154152.d #28	ENSGT00940000160113 #29	ENSGT00390000017856.b #30	ENSGT00940000159503 #31	ENSGT00940000155029.c.b #32	ENSGT00940000159774 #33	ENSGT00940000162072 #34	ENSGT00940000158354 #35	ENSGT00940000161108 #36
Diprotodontia_a	ANCESTRAL SPECIES	11	ENSGT00940000153451.a.a.a	ENSGT00940000157961.C #8	ENSGT00940000157982.b #9	ENSGT00940000156314 #10	ENSGT00940000160776 #11	ENSGT00390000012679 #12	ENSGT00940000155246.e #13	ENSGT00550000074898 #14	ENSGT00940000153704.B #15	ENSGT00940000160397.b #16	ENSGT00940000157439 #17	ENSGT00390000000603 #18	ENSGT00940000161315 #19	ENSGT00390000013474.b.a #20	ENSGT00940000161498 #21	ENSGT00940000159590 #22	ENSGT00640000092844	ENSGT00390000011219 #23	ENSGT00940000154534.a #24	ENSGT00390000000713 #25	ENSGT00390000004405.b #26	ENSGT00950000182892.a.b.a.a #27	ENSGT00940000154152.d #28	ENSGT00940000160113 #29	ENSGT00390000017856.b #30	ENSGT00940000159503 #31	ENSGT00940000155029.c.b #32	ENSGT00940000159774 #33	ENSGT00940000162072 #34	ENSGT00940000158354 #35	ENSGT00940000161108 #36
Common wonbat	MODERN SPECIES	1037	EPOP (ENSVURG00010006761)	SRCIN1 (ENSVURG00010006777) #8	ARHGAP23 (ENSVURG00010006847) #9	SOCS7 (ENSVURG00010006912) #10	ENSVURG00010007072 #11	MRPL45 (ENSVURG00010007098) #12	ENSVURG00010007112 #13	KPNB1 (ENSVURG00010007118) #14	TBKBP1 (ENSVURG00010007134) #15	TBX21 (ENSVURG00010007151) #16	OSBPL7 (ENSVURG00010007175) #17	MRPL10 (ENSVURG00010007313) #18	LRRC46 (ENSVURG00010007320) #19	SCRN2 (ENSVURG00010007326) #20	SP6 (ENSVURG00010007336) #21	SP2 (ENSVURG00010007347) #22	ENSVURG00010007365	PNPO (ENSVURG00010007376) #23	PRR15L (ENSVURG00010007394) #24	CDK5RAP3 (ENSVURG00010007403) #25	COPZ2 (ENSVURG00010007430) #26	NFE2L1 (ENSVURG00010007465) #27	CBX1 (ENSVURG00010007537) #28	SNX11 (ENSVURG00010007541) #29	SKAP1 (ENSVURG00010007559) #30	HOXB1 (ENSVURG00010007572) #31	HOXB2 (ENSVURG00010007579) #32	HOXB3 (ENSVURG00010007587) #33	HOXB4 (ENSVURG00010007589) #34	HOXB5 (ENSVURG00010007599) #35	HOXB6 (ENSVURG00010007602) #36
koala	MODERN SPECIES	67	EPOP (ENSPCIG00000001334)	SRCIN1 (ENSPCIG00000001224) #8	ARHGAP23 (ENSPCIG00000001149) #9	SOCS7 (ENSPCIG00000001102) #10	ENSPCIG00000001092 #11	MRPL45 (ENSPCIG00000001069) #12	NPEPPS (ENSPCIG00000009620) #13	KPNB1 (ENSPCIG00000001034) #14	TBKBP1 (ENSPCIG00000001017) #15	ENSPCIG00000000999 #16	OSBPL7 (ENSPCIG00000000940) #17	MRPL10 (ENSPCIG00000031062) #18	LRRC46 (ENSPCIG00000000900) #19	SCRN2 (ENSPCIG00000000883) #20	SP6 (ENSPCIG00000000873) #21	SP2 (ENSPCIG00000000843) #22	ENSPCIG00000000834	PNPO (ENSPCIG00000000828) #23	PRR15L (ENSPCIG00000000814) #24	CDK5RAP3 (ENSPCIG00000000798) #25	COPZ2 (ENSPCIG00000000757) #26	NFE2L1 (ENSPCIG00000000720) #27	CBX1 (ENSPCIG00000000630) #28	SNX11 (ENSPCIG00000000612) #29	SKAP1 (ENSPCIG00000000339) #30	HOXB1 (ENSPCIG00000033449) #31	HOXB2 (ENSPCIG00000000295) #32	HOXB3 (ENSPCIG00000000217) #33	HOXB4 (ENSPCIG00000000195) #34	HOXB5 (ENSPCIG00000031080) #35	HOXB6 (ENSPCIG00000000076) #36
Wallaby	MODERN SPECIES	13659																SP2 (ENSMEUG00000015302) #22	PNPO (ENSMEUG00000015300) #23
Tasmanian devil	MODERN SPECIES	3	SRCIN1 (ENSSHAG00000017633) #8	ARHGAP23 (ENSSHAG00000017726) #9	SOCS7 (ENSSHAG00000031561) #10	ENSSHAG00000017950 #11	ENSSHAG00000025003 #12	ENSSHAG00000018038 #13	ENSSHAG00000018214 #14	TBKBP1 (ENSSHAG00000021573) #15	ENSSHAG00000018315 #16	ENSSHAG00000028042 #16	OSBPL7 (ENSSHAG00000003116) #17	MRPL10 (ENSSHAG00000030224) #18	LRRC46 (ENSSHAG00000003740) #19	SCRN2 (ENSSHAG00000003868) #20	SP6 (ENSSHAG00000030597) #21	SP2 (ENSSHAG00000005633) #22	ENSSHAG00000005930	PNPO (ENSSHAG00000023730) #23	PRR15L (ENSSHAG00000025985) #24	CDK5RAP3 (ENSSHAG00000006548) #25	COPZ2 (ENSSHAG00000023675) #26	NFE2L1 (ENSSHAG00000026195) #27	CBX1 (ENSSHAG00000023789) #28	SNX11 (ENSSHAG00000029423) #29	ENSSHAG00000029678	HOXB1 (ENSSHAG00000012150) #31	HOXB2 (ENSSHAG00000012232) #32	HOXB3 (ENSSHAG00000031207) #33	HOXB5 (ENSSHAG00000024100) #35	HOXB7 (ENSSHAG00000022783) #37	HOXB8 (ENSSHAG00000023021)