Euarchontoglires	ANCESTRAL SPECIES		ENSGT00940000163178	ENSGT00940000160073	ENSGT01000000214440.A.a.b.a #7	ENSGT00940000156115 #8	ENSGT00530000063770.c.a #9	ENSGT00390000010045 #10	ENSGT00950000183182.a.a #11	ENSGT01090000260093.b #12	ENSGT00950000182978.B #13	ENSGT01060000248589.D	ENSGT00390000012569.a #16	ENSGT00390000006264 #17	ENSGT00950000183168.B.a #18	ENSGT00390000003312 #19	ENSGT00940000157582 #21	ENSGT00940000155543 #22	ENSGT00940000156139 #23	ENSGT00940000162094 #24	ENSGT00940000164873	ENSGT00390000002144 #25	ENSGT00410000025596.a.b #26	ENSGT00940000156761	ENSGT00940000157669	ENSGT00940000157833	ENSGT00530000063698.b	ENSGT00940000156213	ENSGT00940000156592	ENSGT00940000157151	ENSGT00940000159638	ENSGT00940000153446.a.b	ENSGT00940000160209
Primates	ANCESTRAL SPECIES	4	ENSGT00940000163178	ENSGT00940000160073	ENSGT01000000214440.A.a.b.a #7	ENSGT00940000156115 #8	ENSGT00530000063770.c.a #9	ENSGT00390000010045 #10	ENSGT00950000183182.a.a #11	ENSGT01090000260093.b #12	ENSGT00950000182978.B #13	ENSGT01060000248589.D	ENSGT00390000012569.a #16	ENSGT00390000006264 #17	ENSGT00950000183168.B.a #18	ENSGT00390000003312 #19	ENSGT00940000157582 #21	ENSGT00940000155543 #22	ENSGT00940000156139 #23	ENSGT00940000162094 #24	ENSGT00940000164873	ENSGT00390000002144 #25	ENSGT00410000025596.a.b #26	ENSGT00940000156761	ENSGT00940000157669	ENSGT00940000157833	ENSGT00530000063698.b	ENSGT00940000156213	ENSGT00940000156592	ENSGT00940000157151	ENSGT00940000159638	ENSGT00940000153446.a.b	ENSGT00940000160209
Haplorrhini	ANCESTRAL SPECIES	1	ENSGT00940000163178	ENSGT00940000160073	ENSGT01000000214440.A.a.b.a #7	ENSGT00940000156115 #8	ENSGT00530000063770.c.a #9	ENSGT00390000010045 #10	ENSGT00950000183182.a.a #11	ENSGT01090000260093.b #12	ENSGT00950000182978.B #13	ENSGT01060000248589.D	ENSGT00390000012569.a #16	ENSGT00390000006264 #17	ENSGT00950000183168.B.a #18	ENSGT00390000003312 #19	ENSGT00940000157582 #21	ENSGT00940000155543 #22	ENSGT00940000156139 #23	ENSGT00940000162094 #24	ENSGT00390000002144 #25	ENSGT00410000025596.a.b #26	ENSGT00940000156761	ENSGT00940000157669	ENSGT00940000157833	ENSGT00530000063698.b	ENSGT00940000156213	ENSGT00940000156592	ENSGT00940000157151	ENSGT00940000159638	ENSGT00940000153446.a.b	ENSGT00940000160209	ENSGT00940000158079
Simiiformes	ANCESTRAL SPECIES	3	ENSGT00940000160073	ENSGT01000000214440.A.a.b.a #7	ENSGT00940000156115 #8	ENSGT00530000063770.c.a #9	ENSGT00390000010045.g.b #10	ENSGT00950000183182.a.a #11	ENSGT01090000260093.b #12	ENSGT00950000182978.B #13	ENSGT01060000248589.D	ENSGT00390000012569.a.fb.b.a ##16	ENSGT00390000012569.a.fb.b.b.a #16	ENSGT00390000006264 #17	ENSGT00950000183168.B.a #18	ENSGT00390000003312 #19	ENSGT00940000157582 #21	ENSGT00940000155543 #22	ENSGT00940000156139 #23	ENSGT00940000162094 #24	ENSGT00390000002144 #25	ENSGT00410000025596.a.b #26	ENSGT00940000156761	ENSGT00940000157669	ENSGT00940000157833	ENSGT00530000063698.b	ENSGT00940000156213	ENSGT00940000156592	ENSGT00940000157151	ENSGT00940000159638	ENSGT00940000153446.a.b	ENSGT00940000160209	ENSGT00910000147267
Catarrhini	ANCESTRAL SPECIES	3	ENSGT01000000214440.A.a.b.a #7	ENSGT00940000156115 #8	ENSGT00530000063770.c.a #9	ENSGT00390000010045.g.b #10	ENSGT00950000183182.a.a #11	ENSGT01090000260093.b #12	ENSGT00950000182978.B #13	ENSGT00940000154861.d #14	ENSGT01060000248589.D	ENSGT00390000012569.a.fb.b.a ##16	ENSGT00390000012569.a.fb.b.b.a #16	ENSGT00390000006264 #17	ENSGT00950000183168.B.a #18	ENSGT00390000003312 #19	ENSGT00940000157582 #21	ENSGT00940000155543 #22	ENSGT00940000156139 #23	ENSGT00940000162094 #24	ENSGT00390000002144 #25	ENSGT00410000025596.a.b #26	ENSGT00940000156761	ENSGT00940000157669	ENSGT00940000157833	ENSGT00530000063698.b	ENSGT00940000156213	ENSGT00940000156592	ENSGT00940000157151	ENSGT00940000159638	ENSGT00940000153446.a.b	ENSGT00940000160209	ENSGT00910000147267
Cercopithecidae	ANCESTRAL SPECIES	2	ENSGT01000000214440.A.a.b.a #7	ENSGT00940000156115 #8	ENSGT00530000063770.c.a #9	ENSGT00390000010045.g.b #10	ENSGT00950000183182.a.a #11	ENSGT01090000260093.b #12	ENSGT00950000182978.B #13	ENSGT00940000154861.d #14	ENSGT01060000248589.D	ENSGT00390000012569.a.fb.b.b.a.b ##16	ENSGT00390000012569.a.fb.b.b.a.a #16	ENSGT00390000006264 #17	ENSGT00950000183168.B.a #18	ENSGT00390000003312 #19	ENSGT00940000157582 #21	ENSGT00940000155543 #22	ENSGT00940000156139 #23	ENSGT00940000162094 #24	ENSGT00390000002144 #25	ENSGT00410000025596.a.b #26	ENSGT00940000156761	ENSGT00940000157669	ENSGT00940000157833	ENSGT00530000063698.b	ENSGT00940000156213	ENSGT00940000156592	ENSGT00940000157151	ENSGT00940000159638	ENSGT00940000153446.a.b	ENSGT00940000160209	ENSGT00910000147267
Rhinopithecus	ANCESTRAL SPECIES	82	ENSGT00940000160073	ENSGT01000000214440.A.a.b.a #7	ENSGT00940000156115 #8	ENSGT00530000063770.c.a #9	ENSGT00390000010045.g.b #10	ENSGT00950000183182.a.a #11	ENSGT01090000260093.b #12	ENSGT00950000182978.B #13	ENSGT00940000154861.d #14	ENSGT01060000248589.D	ENSGT00390000012569.a.fb.b.b.a.a #16	ENSGT00390000006264 #17	ENSGT00950000183168.B.a #18	ENSGT00390000003312 #19	ENSGT00940000157582 #21	ENSGT00940000155543 #22	ENSGT00940000156139 #23	ENSGT00940000162094 #24	ENSGT00390000002144 #25	ENSGT00410000025596.a.b #26	ENSGT00940000156761	ENSGT00940000157669	ENSGT00940000157833	ENSGT00530000063698.b	ENSGT00940000156213	ENSGT00940000156592	ENSGT00940000157151
Black snub-nosed monkey	MODERN SPECIES	1846	STX12 (ENSRBIG00000036484) #7	PPP1R8 (ENSRBIG00000012191) #8	THEMIS2 (ENSRBIG00000012387) #9	RPA2 (ENSRBIG00000036230) #10	SMPDL3B (ENSRBIG00000039924) #11	XKR8 (ENSRBIG00000041388) #12	EYA3 (ENSRBIG00000038991) #13	ENSRBIG00000036065 #14	ENSRBIG00000003411 #15	ENSRBIG00000035627 #16	ATP5IF1 (ENSRBIG00000044587) #17	SESN2 (ENSRBIG00000028417) #18	MED18 (ENSRBIG00000032607) #19	ENSRBIG00000029501 #20	PHACTR4 (ENSRBIG00000017683) #21	RCC1 (ENSRBIG00000031101) #22	TRNAU1AP (ENSRBIG00000029083) #23	RAB42 (ENSRBIG00000033359) #24	TAF12 (ENSRBIG00000006334) #25	GMEB1 (ENSRBIG00000001692) #26
Golden snub-nosed monkey	MODERN SPECIES	2213	STX12 (ENSRROG00000031145) #7	PPP1R8 (ENSRROG00000041525) #8	THEMIS2 (ENSRROG00000024691) #9	RPA2 (ENSRROG00000040865) #10	SMPDL3B (ENSRROG00000035411) #11	XKR8 (ENSRROG00000034100) #12	EYA3 (ENSRROG00000036974) #13	ENSRROG00000030937 #14	PTAFR (ENSRROG00000003323)	ENSRROG00000013306 #15	ENSRROG00000045532 #16	ATP5IF1 (ENSRROG00000036303) #17	SESN2 (ENSRROG00000045413) #18	MED18 (ENSRROG00000036453) #19	PHACTR4 (ENSRROG00000041295) #21	RCC1 (ENSRROG00000042995) #22	TRNAU1AP (ENSRROG00000029128) #23	RAB42 (ENSRROG00000031599) #24	TAF12 (ENSRROG00000026844) #25	GMEB1 (ENSRROG00000034775) #26	YTHDF2 (ENSRROG00000038863)	OPRD1 (ENSRROG00000029540)	ENSRROG00000035486	EPB41 (ENSRROG00000043332)	TMEM200B (ENSRROG00000006582)	SRSF4 (ENSRROG00000029463)	MECR (ENSRROG00000042945)	PTPRU (ENSRROG00000033586)
Cercopithecinae	ANCESTRAL SPECIES		ENSGT00940000160073	ENSGT01000000214440.A.a.b.a #7	ENSGT00940000156115 #8	ENSGT00530000063770.c.a #9	ENSGT00390000010045.g.b #10	ENSGT00950000183182.a.a #11	ENSGT01090000260093.b #12	ENSGT00950000182978.B #13	ENSGT00940000154861.d #14	ENSGT01060000248589.D	ENSGT00390000012569.a.fb.b.b.a.a #16	ENSGT00390000006264.j #17	ENSGT00950000183168.B.a #18	ENSGT00390000003312 #19	ENSGT00940000157582 #21	ENSGT00940000155543 #22	ENSGT00940000156139 #23	ENSGT00940000162094 #24	ENSGT00390000002144 #25	ENSGT00410000025596.a.b #26	ENSGT00940000156761	ENSGT00940000157669	ENSGT00940000157833	ENSGT00530000063698.b	ENSGT00940000156213	ENSGT00940000156592	ENSGT00940000157151	ENSGT00940000159638	ENSGT00940000153446.a.b	ENSGT00940000160209	ENSGT00910000147267
Vervet Monkey	MODERN SPECIES	12	IFI6 (ENSCSAG00000000997)	FAM76A (ENSCSAG00000000999)	STX12 (ENSCSAG00000001000) #7	PPP1R8 (ENSCSAG00000001002) #8	THEMIS2 (ENSCSAG00000001003) #9	RPA2 (ENSCSAG00000001004) #10	XKR8 (ENSCSAG00000001005) #12	EYA3 (ENSCSAG00000001006) #13	PTAFR (ENSCSAG00000000653)	ENSCSAG00000000654 ##15	ENSCSAG00000001007 ##16	ENSCSAG00000001008 #17	SESN2 (ENSCSAG00000001009) #18	MED18 (ENSCSAG00000001010) #19	PHACTR4 (ENSCSAG00000001011) #21	RCC1 (ENSCSAG00000001012) #22	TRNAU1AP (ENSCSAG00000001014) #23	RAB42 (ENSCSAG00000001015) #24	TAF12 (ENSCSAG00000001016) #25	GMEB1 (ENSCSAG00000001017) #26	YTHDF2 (ENSCSAG00000001018)	ENSCSAG00000001019	OPRD1 (ENSCSAG00000001020)	EPB41 (ENSCSAG00000001021)	TMEM200B (ENSCSAG00000000655)	SRSF4 (ENSCSAG00000001022)	MECR (ENSCSAG00000001023)	PTPRU (ENSCSAG00000001024)	MATN1 (ENSCSAG00000001025)	LAPTM5 (ENSCSAG00000001026)	SDC3 (ENSCSAG00000001027)
Cercopithecinae_a	ANCESTRAL SPECIES		ENSGT00940000160073	ENSGT01000000214440.A.a.b.a #7	ENSGT00940000156115 #8	ENSGT00530000063770.c.a #9	ENSGT00390000010045.g.b #10	ENSGT00950000183182.a.a #11	ENSGT01090000260093.b #12	ENSGT00950000182978.B #13	ENSGT00940000154861.d #14	ENSGT01060000248589.D	ENSGT00390000012569.a.fb.b.b.a.b ##16	ENSGT00390000006264.j #17	ENSGT00950000183168.B.a #18	ENSGT00390000003312 #19	ENSGT00940000157582 #21	ENSGT00940000155543 #22	ENSGT00940000156139 #23	ENSGT00390000018898.`b.b	ENSGT00940000162094 #24	ENSGT00390000002144 #25	ENSGT00410000025596.a.b #26	ENSGT00940000156761	ENSGT00940000157669	ENSGT00940000157833	ENSGT00530000063698.b	ENSGT00940000156213	ENSGT00940000156592	ENSGT00940000157151	ENSGT00940000159638	ENSGT00940000153446.a.b	ENSGT00940000160209
Cercopithecinae_b	ANCESTRAL SPECIES	1	ENSGT01000000214440.A.a.b.a #7	ENSGT00940000156115 #8	ENSGT00530000063770.c.a #9	ENSGT00390000010045.g.b #10	ENSGT00950000183182.a.a #11	ENSGT01090000260093.b #12	ENSGT00950000182978.B #13	ENSGT00940000154861.d #14	ENSGT01060000248589.D	ENSGT00390000012569.a.fb.b.b.a.b ##16	ENSGT00390000012569.a.fb.b.b.a.a #16	ENSGT00390000006264.j #17	ENSGT00950000183168.B.a #18	ENSGT00390000003312 #19	ENSGT00940000157582 #21	ENSGT00940000155543 #22	ENSGT00940000156139 #23	ENSGT00390000018898.`b.b	ENSGT00940000162094 #24	ENSGT00390000002144 #25	ENSGT00410000025596.a.b #26	ENSGT00940000156761	ENSGT00940000157669	ENSGT00940000157833	ENSGT00530000063698.b	ENSGT00940000156213	ENSGT00940000156592	ENSGT00940000157151	ENSGT00940000159638	ENSGT00940000153446.a.b	ENSGT00940000160209
Olive baboon	DUPLICATION
Olive baboon	MODERN SPECIES		FAM76A (ENSPANG00000000247)	STX12 (ENSPANG00000007130) #7	PPP1R8 (ENSPANG00000043070) #8	THEMIS2 (ENSPANG00000005205) #9	RPA2 (ENSPANG00000017991) #10	SMPDL3B (ENSPANG00000007129) #11	XKR8 (ENSPANG00000007916) #12	EYA3 (ENSPANG00000016511) #13	ENSPANG00000042576	PTAFR (ENSPANG00000006117)	ENSPANG00000012833 #16	ATP5IF1 (ENSPANG00000018327) #17	SESN2 (ENSPANG00000012598) #18	MED18 (ENSPANG00000006507) #19	PHACTR4 (ENSPANG00000022866) #21	ENSPANG00000033403 #22	TRNAU1AP (ENSPANG00000016019) #23	RAB42 (ENSPANG00000015797) #24	TAF12 (ENSPANG00000022039) #25	GMEB1 (ENSPANG00000018743) #26	YTHDF2 (ENSPANG00000006550)	EPB41 (ENSPANG00000000507)	TMEM200B (ENSPANG00000017831)	SRSF4 (ENSPANG00000021937)	MECR (ENSPANG00000007687)	PTPRU (ENSPANG00000011555)	ENSPANG00000038388	MATN1 (ENSPANG00000016577)	LAPTM5 (ENSPANG00000016018)	SDC3 (ENSPANG00000008025)	PUM1 (ENSPANG00000016338)
Olive baboon	MODERN SPECIES	2	ENSPANG00000040344	ENSPANG00000000253	ENSPANG00000047502	ZFAND4 (ENSPANG00000022669)	MARCHF8 (ENSPANG00000022668)	ALOX5 (ENSPANG00000022667)	PARG (ENSPANG00000022653)	TIMM23 (ENSPANG00000022652)	NCOA4 (ENSPANG00000022656)	MSMB (ENSPANG00000022672)	ANTXRL (ENSPANG00000022616)	ENSPANG00000043475	RBP3 (ENSPANG00000022632)	GDF2 (ENSPANG00000030559)	GDF10 (ENSPANG00000022630)	ENSPANG00000043437 #22	PTPN20 (ENSPANG00000022629)	ENSPANG00000022628	MAPK8 (ENSPANG00000022627)	ARHGAP22 (ENSPANG00000022626)	WDFY4 (ENSPANG00000022623)	LRRC18 (ENSPANG00000022625)	VSTM4 (ENSPANG00000022622)	C10orf71 (ENSPANG00000041901)	DRGX (ENSPANG00000035370)	ERCC6 (ENSPANG00000022650)	SLC18A3 (ENSPANG00000011656)	CHAT (ENSPANG00000022655)	C10orf53 (ENSPANG00000038571)	OGDHL (ENSPANG00000022654)	ENSPANG00000044690
Cercopithecinae_d	ANCESTRAL SPECIES	1	ENSGT00940000160073	ENSGT01000000214440.A.a.b.a #7	ENSGT00940000156115 #8	ENSGT00530000063770.c.a #9	ENSGT00390000010045.g.b #10	ENSGT00950000183182.a.a #11	ENSGT01090000260093.b #12	ENSGT00950000182978.B #13	ENSGT00940000154861.d #14	ENSGT01060000248589.D	ENSGT00390000012569.a.fb.b.b.a.b ##16	ENSGT00390000006264.j #17	ENSGT00950000183168.B.a #18	ENSGT00390000003312 #19	ENSGT00940000157582 #21	ENSGT00940000155543 #22	ENSGT00940000156139 #23	ENSGT00390000018898.`b.b	ENSGT00940000162094 #24	ENSGT00390000002144 #25	ENSGT00410000025596.a.b #26	ENSGT00940000156761	ENSGT00940000157669	ENSGT00940000157833	ENSGT00530000063698.b	ENSGT00940000156213	ENSGT00940000156592	ENSGT00940000157151	ENSGT00940000159638	ENSGT00940000153446.a.b	ENSGT00940000160209
Drill	MODERN SPECIES	832	STX12 (ENSMLEG00000038548) #7	PPP1R8 (ENSMLEG00000041495) #8	THEMIS2 (ENSMLEG00000040682) #9	RPA2 (ENSMLEG00000031567) #10	SMPDL3B (ENSMLEG00000039800) #11	XKR8 (ENSMLEG00000043403) #12	EYA3 (ENSMLEG00000042664) #13	ENSMLEG00000033540 #14	PTAFR (ENSMLEG00000000550)	ENSMLEG00000003164 ##16	ENSMLEG00000027639 #15	ATP5IF1 (ENSMLEG00000031790) #17	SESN2 (ENSMLEG00000036334) #18	MED18 (ENSMLEG00000030739) #19	PHACTR4 (ENSMLEG00000030370) #21	RCC1 (ENSMLEG00000032267) #22	TRNAU1AP (ENSMLEG00000015649) #23	ENSMLEG00000044462	RAB42 (ENSMLEG00000035485) #24	TAF12 (ENSMLEG00000029589) #25	GMEB1 (ENSMLEG00000018636) #26	YTHDF2 (ENSMLEG00000030371)	OPRD1 (ENSMLEG00000031448)	EPB41 (ENSMLEG00000018623)	SRSF4 (ENSMLEG00000031619)	MECR (ENSMLEG00000028607)	PTPRU (ENSMLEG00000031671)
Sooty mangabey	MODERN SPECIES	227	FAM76A (ENSCATG00000033886)	STX12 (ENSCATG00000032583) #7	PPP1R8 (ENSCATG00000032635) #8	THEMIS2 (ENSCATG00000031969) #9	RPA2 (ENSCATG00000044566) #10	SMPDL3B (ENSCATG00000017005) #11	XKR8 (ENSCATG00000015702) #12	EYA3 (ENSCATG00000027843) #13	ENSCATG00000017621 #14	PTAFR (ENSCATG00000005828)	ENSCATG00000033266 ##16	ATP5IF1 (ENSCATG00000044245) #17	SESN2 (ENSCATG00000016723) #18	MED18 (ENSCATG00000033221) #19	PHACTR4 (ENSCATG00000015008) #21	RCC1 (ENSCATG00000033576) #22	ENSCATG00000033176	TRNAU1AP (ENSCATG00000044617) #23	ENSCATG00000004302 #24	TAF12 (ENSCATG00000043940) #25	GMEB1 (ENSCATG00000015607) #26	YTHDF2 (ENSCATG00000044332)	OPRD1 (ENSCATG00000027331)	ENSCATG00000006297	EPB41 (ENSCATG00000028944)	TMEM200B (ENSCATG00000005039)	SRSF4 (ENSCATG00000031440)	MECR (ENSCATG00000043979)	PTPRU (ENSCATG00000036995)	MATN1 (ENSCATG00000044560)	LAPTM5 (ENSCATG00000043956)
Macaca	ANCESTRAL SPECIES		ENSGT00940000160073	ENSGT01000000214440.A.a.b.a #7	ENSGT00940000156115 #8	ENSGT00530000063770.c.a #9	ENSGT00390000010045.g.b #10	ENSGT00950000183182.a.a #11	ENSGT01090000260093.b #12	ENSGT00950000182978.B #13	ENSGT00940000154861.d #14	ENSGT01060000248589.D	ENSGT00390000012569.a.fb.b.b.a.a #16	ENSGT00390000006264.i.a #17	ENSGT00950000183168.B.a #18	ENSGT00390000003312 #19	ENSGT00940000157582 #21	ENSGT00940000155543 #22	ENSGT00940000156139 #23	ENSGT00390000018898.`b.b	ENSGT00940000162094 #24	ENSGT00390000002144 #25	ENSGT00410000025596.a.b #26	ENSGT00940000156761	ENSGT00940000157669	ENSGT00390000010721.a.a.b	ENSGT00940000157833	ENSGT00530000063698.b	ENSGT00940000156213	ENSGT00940000156592	ENSGT00940000157151	ENSGT00940000159638	ENSGT00940000153446.a.b
Macaca_a	ANCESTRAL SPECIES		ENSGT00940000163178	ENSGT00940000160073	ENSGT01000000214440.A.a.b.a #7	ENSGT00940000156115 #8	ENSGT00530000063770.c.a #9	ENSGT00390000010045.g.b #10	ENSGT00950000183182.a.a #11	ENSGT01090000260093.b #12	ENSGT00950000182978.B #13	ENSGT01060000248589.D	ENSGT00390000012569.a.fb.b.b.a.a #16	ENSGT00390000006264.i.a #17	ENSGT00950000183168.B.a #18	ENSGT00390000003312 #19	ENSGT00940000157582 #21	ENSGT00940000155543 #22	ENSGT00940000156139 #23	ENSGT00940000162094 #24	ENSGT00390000002144 #25	ENSGT00410000025596.a.b #26	ENSGT00940000156761	ENSGT00940000157669	ENSGT00390000010721.a.a.b	ENSGT00940000157833	ENSGT00530000063698.b	ENSGT00940000156213	ENSGT00940000156592	ENSGT00940000157151	ENSGT01100000263539.b.a.a.a.a.a.b.b.a.a.b.a.b.a.b.a.b.a.a.a	ENSGT00940000159638	ENSGT00940000153446.a.b
Crab-eating macaque	MODERN SPECIES		FAM76A (ENSMFAG00000051312)	PPP1R8 (ENSMFAG00000001557) #8	THEMIS2 (ENSMFAG00000030730) #9	RPA2 (ENSMFAG00000022522) #10	SMPDL3B (ENSMFAG00000044059) #11	XKR8 (ENSMFAG00000037317) #12	STX12 (ENSMFAG00000003645) #7	EYA3 (ENSMFAG00000045224) #13	PTAFR (ENSMFAG00000063827)	ENSMFAG00000040941	ATP5IF1 (ENSMFAG00000037657) #17	SESN2 (ENSMFAG00000043063) #18	ENSMFAG00000048953	ENSMFAG00000053009	PHACTR4 (ENSMFAG00000040093) #21	RCC1 (ENSMFAG00000039145) #22	ENSMFAG00000064996	TRNAU1AP (ENSMFAG00000043751) #23	RAB42 (ENSMFAG00000060532) #24	TAF12 (ENSMFAG00000041370) #25	GMEB1 (ENSMFAG00000031717) #26	YTHDF2 (ENSMFAG00000026128)	OPRD1 (ENSMFAG00000034678)	ENSMFAG00000003794	EPB41 (ENSMFAG00000046344)	ENSMFAG00000062308	TMEM200B (ENSMFAG00000038738)	SRSF4 (ENSMFAG00000041784)	MECR (ENSMFAG00000000155)	PTPRU (ENSMFAG00000001608)	ENSMFAG00000063061
Rhesus	MODERN SPECIES		ENSMMUG00000057915	STX12 (ENSMMUG00000012252) #8	ENSMMUG00000056206	THEMIS2 (ENSMMUG00000018170) #9	RPA2 (ENSMMUG00000018172) #10	ENSMMUG00000018175 #11	XKR8 (ENSMMUG00000054886) #12	EYA3 (ENSMMUG00000012965) #13	ENSMMUG00000060250	PTAFR (ENSMMUG00000063261)	DNAJC8 (ENSMMUG00000017080) #16	ATP5IF1 (ENSMMUG00000018678) #17	SESN2 (ENSMMUG00000019993) #18	MED18 (ENSMMUG00000010353) #19	PHACTR4 (ENSMMUG00000019216) #21	RCC1 (ENSMMUG00000018338) #22	TRNAU1AP (ENSMMUG00000006561) #23	RAB42 (ENSMMUG00000006559) #24	TAF12 (ENSMMUG00000050311) #25	GMEB1 (ENSMMUG00000011390) #26	ENSMMUG00000055489	YTHDF2 (ENSMMUG00000011391)	EPB41 (ENSMMUG00000011377)	TMEM200B (ENSMMUG00000011378)	SRSF4 (ENSMMUG00000007110)	MECR (ENSMMUG00000015659)	PTPRU (ENSMMUG00000015661)	ENSMMUG00000057173	ENSMMUG00000051737	MATN1 (ENSMMUG00000054963)	LAPTM5 (ENSMMUG00000008744)
Pig-tailed macaque	DUPLICATION
Pig-tailed macaque	MODERN SPECIES	129	ENSMNEG00000042478	ENSMNEG00000041640	ENSMNEG00000041397	SHLD2 (ENSMNEG00000035685)	ENSMNEG00000030901	GPRIN2 (ENSMNEG00000027130)	ENSMNEG00000024895	ENSMNEG00000015982	ENSMNEG00000034700	ENSMNEG00000035244	ENSMNEG00000038712	ENSMNEG00000032122	RBP3 (ENSMNEG00000040793)	GDF2 (ENSMNEG00000039147)	GDF10 (ENSMNEG00000037022)	ENSMNEG00000042349 #22	PTPN20 (ENSMNEG00000035527)	FRMPD2 (ENSMNEG00000031211)	MAPK8 (ENSMNEG00000030681)	ENSMNEG00000023358	ENSMNEG00000023123	ARHGAP22 (ENSMNEG00000040424)	LRRC18 (ENSMNEG00000033761)	WDFY4 (ENSMNEG00000001096)	VSTM4 (ENSMNEG00000032340)	FAM170B (ENSMNEG00000029499)	TMEM273 (ENSMNEG00000034199)	DRGX (ENSMNEG00000043532)	ERCC6 (ENSMNEG00000043701)	SLC18A3 (ENSMNEG00000015760)	CHAT (ENSMNEG00000042067)
Pig-tailed macaque	MODERN SPECIES	217	ENSMNEG00000041438	STX12 (ENSMNEG00000005186) #7	PPP1R8 (ENSMNEG00000030784) #8	THEMIS2 (ENSMNEG00000036095) #9	RPA2 (ENSMNEG00000032153) #10	SMPDL3B (ENSMNEG00000040406) #11	XKR8 (ENSMNEG00000037672) #12	EYA3 (ENSMNEG00000030436) #13	ENSMNEG00000043243 #14	PTAFR (ENSMNEG00000023879)	ENSMNEG00000011552 ##16	ATP5IF1 (ENSMNEG00000020230) #17	SESN2 (ENSMNEG00000040155) #18	MED18 (ENSMNEG00000040104) #19	PHACTR4 (ENSMNEG00000033673) #21	ENSMNEG00000005673 #22	TRNAU1AP (ENSMNEG00000044201) #23	ENSMNEG00000029703	RAB42 (ENSMNEG00000032871) #24	TAF12 (ENSMNEG00000032703) #25	GMEB1 (ENSMNEG00000035670) #26	YTHDF2 (ENSMNEG00000041161)	OPRD1 (ENSMNEG00000039650)	ENSMNEG00000002799	EPB41 (ENSMNEG00000029961)	TMEM200B (ENSMNEG00000025032)	SRSF4 (ENSMNEG00000034931)	MECR (ENSMNEG00000042809)	PTPRU (ENSMNEG00000044104)	MATN1 (ENSMNEG00000031564)	LAPTM5 (ENSMNEG00000012765)
Hominoidea	ANCESTRAL SPECIES	3	ENSGT01000000214440.A.a.b.a #7	ENSGT00940000156115 #8	ENSGT00550000076274	ENSGT00530000063770.c.a #9	ENSGT00390000010045.g.b #10	ENSGT00950000183182.a.a #11	ENSGT01090000260093.b #12	ENSGT00950000182978.B #13	ENSGT00940000154861.d #14	ENSGT01060000248589.D	ENSGT00390000012569.a.fb.b.a.a ##16	ENSGT00390000006264 #17	ENSGT00950000183168.B.a #18	ENSGT00390000003312 #19	ENSGT00940000157582 #21	ENSGT00940000155543 #22	ENSGT00940000156139 #23	ENSGT00940000162094 #24	ENSGT00390000002144 #25	ENSGT00410000025596.a.b #26	ENSGT00940000156761	ENSGT00940000157669	ENSGT00940000157833	ENSGT00530000063698.b	ENSGT00940000156213	ENSGT00940000156592	ENSGT00940000157151	ENSGT00940000159638	ENSGT00940000153446.a.b	ENSGT00940000160209	ENSGT00940000158079
Gibbon	MODERN SPECIES	16	PPP1R8 (ENSNLEG00000009676) #8	ENSNLEG00000009695	ENSNLEG00000009697 #9	RPA2 (ENSNLEG00000009702) #10	SMPDL3B (ENSNLEG00000009709) #11	XKR8 (ENSNLEG00000009722) #12	EYA3 (ENSNLEG00000009724) #13	PTAFR (ENSNLEG00000009760)	DNAJC8 (ENSNLEG00000009762) ##16	ATP5IF1 (ENSNLEG00000032433) #17	SESN2 (ENSNLEG00000009780) #18	MED18 (ENSNLEG00000009789) #19	ENSNLEG00000009792 #21	ENSNLEG00000034272	ENSNLEG00000029704	RCC1 (ENSNLEG00000009802) #22	TRNAU1AP (ENSNLEG00000009822) #23	ENSNLEG00000018583 #24	ENSNLEG00000009827 #25	GMEB1 (ENSNLEG00000009837) #26	YTHDF2 (ENSNLEG00000009856)	ENSNLEG00000009864	EPB41 (ENSNLEG00000009867)	SRSF4 (ENSNLEG00000009916)	ENSNLEG00000009932	PTPRU (ENSNLEG00000031816)
Hominidae	ANCESTRAL SPECIES	3	ENSGT01000000214440.A.a.b.a #7	ENSGT00940000156115 #8	ENSGT00550000076274	ENSGT00530000063770.c.a #9	ENSGT00390000010045.g.b #10	ENSGT00950000183182.a.a #11	ENSGT01090000260093.b #12	ENSGT00950000182978.B #13	ENSGT00940000154861.d #14	ENSGT01060000248589.D	ENSGT00390000012569.a.fb.b.a.a ##16	ENSGT00390000006264 #17	ENSGT00950000183168.B.a #18	ENSGT00390000003312 #19	ENSGT00940000157582 #21	ENSGT00940000155543 #22	ENSGT00940000156139 #23	ENSGT00940000162094 #24	ENSGT00390000002144 #25	ENSGT00410000025596.a.b #26	ENSGT00940000156761	ENSGT00940000157669	ENSGT00940000157833	ENSGT00530000063698.b	ENSGT00940000156213	ENSGT00940000156592	ENSGT00940000157151	ENSGT00940000159638	ENSGT00940000153446.a.b	ENSGT00940000160209	ENSGT00940000158079
Orangutan	MODERN SPECIES		FAM76A (ENSPPYG00000001656)	STX12 (ENSPPYG00000001655) #7	ENSPPYG00000001653	PPP1R8 (ENSPPYG00000001654) #8	THEMIS2 (ENSPPYG00000001652) #9	RPA2 (ENSPPYG00000001651) #10	SMPDL3B (ENSPPYG00000001650) #11	XKR8 (ENSPPYG00000039433) #12	EYA3 (ENSPPYG00000001648) #13	PTAFR (ENSPPYG00000001647)	ENSPPYG00000025833 ##16	ATP5IF1 (ENSPPYG00000001644) #17	SESN2 (ENSPPYG00000001643) #18	MED18 (ENSPPYG00000001642) #19	PHACTR4 (ENSPPYG00000001641) #21	RCC1 (ENSPPYG00000001640) #22	TRNAU1AP (ENSPPYG00000038044) #23	RAB42 (ENSPPYG00000034855) #24	TAF12 (ENSPPYG00000001636) #25	GMEB1 (ENSPPYG00000001635) #26	YTHDF2 (ENSPPYG00000001634)	OPRD1 (ENSPPYG00000001633)	EPB41 (ENSPPYG00000001631)	TMEM200B (ENSPPYG00000001630)	SRSF4 (ENSPPYG00000001629)	ENSPPYG00000001628	ENSPPYG00000041302	PTPRU (ENSPPYG00000001627)	MATN1 (ENSPPYG00000001625)	LAPTM5 (ENSPPYG00000001624)	SDC3 (ENSPPYG00000001623)
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	3	ENSGT00940000156115 #8	ENSGT00550000076274	ENSGT00530000063770.c.a #9	ENSGT00390000010045.g.b #10	ENSGT00950000183182.a.a #11	ENSGT01090000260093.b #12	ENSGT00950000182978.B #13	ENSGT00940000154861.d #14	ENSGT01060000248589.D	ENSGT00390000012569.a.fb.b.a.a ##16	ENSGT00390000006264 #17	ENSGT00950000183168.B.a #18	ENSGT00390000003312 #19	ENSGT00940000165187	ENSGT00940000157582 #21	ENSGT00940000155543 #22	ENSGT00940000156139 #23	ENSGT00940000162094.a #24	ENSGT00390000002144 #25	ENSGT00410000025596.a.b #26	ENSGT00940000156761	ENSGT00940000157669	ENSGT00940000157833	ENSGT00530000063698.b	ENSGT00940000156213	ENSGT00940000156592	ENSGT00940000157151	ENSGT00940000159638	ENSGT00940000153446.a.b	ENSGT00940000160209	ENSGT00940000158079
Homo/Pan group	ANCESTRAL SPECIES	4	ENSGT00940000156115 #8	ENSGT00550000076274	ENSGT00530000063770.c.a #9	ENSGT00390000010045.g.b #10	ENSGT00950000183182.a.a #11	ENSGT01090000260093.b #12	ENSGT00950000182978.B #13	ENSGT00940000154861.d #14	ENSGT01060000248589.D	ENSGT00390000012569.a.fb.b.a.a ##16	ENSGT00390000006264 #17	ENSGT00950000183168.B.a #18	ENSGT00390000003312 #19	ENSGT00940000165187	ENSGT00940000157582 #21	ENSGT00940000155543 #22	ENSGT00940000156139 #23	ENSGT00940000162094.a #24	ENSGT00390000002144 #25	ENSGT00410000025596.a.b #26	ENSGT00940000156761	ENSGT00940000157669	ENSGT00940000157833	ENSGT00530000063698.b	ENSGT00940000156213	ENSGT00940000156592	ENSGT00940000157151	ENSGT00940000159638	ENSGT00940000153446.a.b	ENSGT00940000160209	ENSGT00940000158079
Pan	ANCESTRAL SPECIES		ENSGT00940000156115 #8	ENSGT00550000076274	ENSGT00530000063770.c.a #9	ENSGT00390000010045.g.b #10	ENSGT00950000183182.a.a #11	ENSGT01090000260093.b #12	ENSGT00950000182978.B #13	ENSGT00940000154861.d #14	ENSGT01060000248589.D	ENSGT00390000012569.a.fb.b.a.a ##16	ENSGT00390000006264 #17	ENSGT00950000183168.B.a #18	ENSGT00390000003312 #19	ENSGT00940000165187	ENSGT00940000157582 #21	ENSGT00940000155543 #22	ENSGT00940000156139 #23	ENSGT00940000162094.a #24	ENSGT00390000002144 #25	ENSGT00410000025596.a.b #26	ENSGT00940000156761	ENSGT00940000157669	ENSGT00940000157833	ENSGT00530000063698.b	ENSGT00940000156213	ENSGT00940000156592	ENSGT00940000157151	ENSGT00940000159638	ENSGT00940000153446.a.b	ENSGT00940000160209	ENSGT00940000158079
Chimpanzee	MODERN SPECIES		PPP1R8 (ENSPTRG00000000417) #8	ENSPTRG00000052043	THEMIS2 (ENSPTRG00000000419) #9	RPA2 (ENSPTRG00000000420) #10	SMPDL3B (ENSPTRG00000000421) #11	XKR8 (ENSPTRG00000000422) #12	EYA3 (ENSPTRG00000000423) #13	ENSPTRG00000044631 #14	PTAFR (ENSPTRG00000000424)	DNAJC8 (ENSPTRG00000000426) ##16	ATP5IF1 (ENSPTRG00000000428) #17	SESN2 (ENSPTRG00000000429) #18	MED18 (ENSPTRG00000000431) #19	PHACTR4 (ENSPTRG00000030718) #21	ENSPTRG00000047179	RCC1 (ENSPTRG00000000432) #22	TRNAU1AP (ENSPTRG00000000434) #23	ENSPTRG00000045612	RAB42 (ENSPTRG00000000436) #24	TAF12 (ENSPTRG00000000437) #25	GMEB1 (ENSPTRG00000000438) #26	YTHDF2 (ENSPTRG00000000439)	OPRD1 (ENSPTRG00000000440)	EPB41 (ENSPTRG00000000442)	TMEM200B (ENSPTRG00000000444)	SRSF4 (ENSPTRG00000000445)	MECR (ENSPTRG00000000446)	PTPRU (ENSPTRG00000000447)	MATN1 (ENSPTRG00000000449)	LAPTM5 (ENSPTRG00000000450)	SDC3 (ENSPTRG00000000451)
Bonobo	MODERN SPECIES		PPP1R8 (ENSPPAG00000036845) #8	ENSPPAG00000004249	THEMIS2 (ENSPPAG00000031100) #9	RPA2 (ENSPPAG00000021088) #10	SMPDL3B (ENSPPAG00000033356) #11	XKR8 (ENSPPAG00000032312) #12	EYA3 (ENSPPAG00000038235) #13	ENSPPAG00000041305 #14	PTAFR (ENSPPAG00000024566)	DNAJC8 (ENSPPAG00000032103) ##16	ATP5IF1 (ENSPPAG00000043083) #17	SESN2 (ENSPPAG00000036650) #18	MED18 (ENSPPAG00000033816) #19	PHACTR4 (ENSPPAG00000033477) #21	ENSPPAG00000027675	RCC1 (ENSPPAG00000030910) #22	TRNAU1AP (ENSPPAG00000033927) #23	RAB42 (ENSPPAG00000043954) #24	ENSPPAG00000027453 #25	GMEB1 (ENSPPAG00000038756) #26	YTHDF2 (ENSPPAG00000032722)	OPRD1 (ENSPPAG00000041756)	EPB41 (ENSPPAG00000038163)	SRSF4 (ENSPPAG00000028357)	MECR (ENSPPAG00000038550)	PTPRU (ENSPPAG00000001262)	ENSPPAG00000022035	MATN1 (ENSPPAG00000003456)	LAPTM5 (ENSPPAG00000030829)	SDC3 (ENSPPAG00000032002)	PUM1 (ENSPPAG00000044003)
Human	MODERN SPECIES		IFI6 (ENSG00000126709)	FAM76A (ENSG00000009780)	STX12 (ENSG00000117758) #7	PPP1R8 (ENSG00000117751) #8	THEMIS2 (ENSG00000130775) #9	RPA2 (ENSG00000117748) #10	SMPDL3B (ENSG00000130768) #11	XKR8 (ENSG00000158156) #12	EYA3 (ENSG00000158161) #13	PTAFR (ENSG00000169403)	DNAJC8 (ENSG00000126698) ##16	ATP5IF1 (ENSG00000130770) #17	SESN2 (ENSG00000130766) #18	MED18 (ENSG00000130772) #19	PHACTR4 (ENSG00000204138) #21	RCC1 (ENSG00000180198) #22	TRNAU1AP (ENSG00000180098) #23	TAF12 (ENSG00000120656) #25	RAB42 (ENSG00000188060) #24	GMEB1 (ENSG00000162419) #26	YTHDF2 (ENSG00000198492)	OPRD1 (ENSG00000116329)	EPB41 (ENSG00000159023)	TMEM200B (ENSG00000253304)	SRSF4 (ENSG00000116350)	MECR (ENSG00000116353)	PTPRU (ENSG00000060656)	ENSG00000289710	MATN1 (ENSG00000162510)	LAPTM5 (ENSG00000162511)	SDC3 (ENSG00000162512)
Gorilla	MODERN SPECIES		ENSGGOG00000040440	THEMIS2 (ENSGGOG00000009217) #9	RPA2 (ENSGGOG00000015287) #10	SMPDL3B (ENSGGOG00000014912) #11	XKR8 (ENSGGOG00000014917) #12	EYA3 (ENSGGOG00000008544) #13	ENSGGOG00000023525	ENSGGOG00000043416 #14	PTAFR (ENSGGOG00000014295)	DNAJC8 (ENSGGOG00000000821) ##16	ATP5IF1 (ENSGGOG00000000822) #17	SESN2 (ENSGGOG00000014485) #18	MED18 (ENSGGOG00000007555) #19	PHACTR4 (ENSGGOG00000012455) #21	ENSGGOG00000038109	ENSGGOG00000007119 #22	TRNAU1AP (ENSGGOG00000003511) #23	RAB42 (ENSGGOG00000008561) #24	ENSGGOG00000008564 #25	GMEB1 (ENSGGOG00000009221) #26	YTHDF2 (ENSGGOG00000024069)	OPRD1 (ENSGGOG00000002157)	EPB41 (ENSGGOG00000004272)	TMEM200B (ENSGGOG00000036267)	SRSF4 (ENSGGOG00000002444)	ENSGGOG00000003122	PTPRU (ENSGGOG00000006305)	MATN1 (ENSGGOG00000007826)	LAPTM5 (ENSGGOG00000017026)	SDC3 (ENSGGOG00000027183)	PUM1 (ENSGGOG00000011983)
Platyrrhini	DUPLICATION
Platyrrhini	ANCESTRAL SPECIES		ENSGT00940000160073	ENSGT01000000214440.A.a.b.a #7	ENSGT00940000156115 #8	ENSGT00530000063770.c.a #9	ENSGT00390000010045.g.b.a #10	ENSGT00950000183182.a.a #11	ENSGT01090000260093.b #12	ENSGT00950000182978.B #13	ENSGT01060000248589.D	ENSGT00390000015229.p	ENSGT00390000012569.a.fb.a.b.a ##16	ENSGT00390000006264 #17	ENSGT00950000183168.B.a #18	ENSGT00390000003312 #19	ENSGT00940000157582 #21	ENSGT00940000155543.e #22	ENSGT00940000155543.f #22	ENSGT00940000156139 #23	ENSGT00940000162094 #24	ENSGT00390000002144 #25	ENSGT00410000025596.a.b #26	ENSGT00940000156761	ENSGT00940000157669	ENSGT00940000157833	ENSGT00530000063698.b	ENSGT00940000156213	ENSGT00940000156592	ENSGT00940000157151	ENSGT00940000159638	ENSGT00940000153446.a.b	ENSGT00940000160209
Cebidae	ANCESTRAL SPECIES	1	ENSGT00940000160073	ENSGT01000000214440.A.a.b.a #7	ENSGT00940000156115 #8	ENSGT00530000063770.c.a #9	ENSGT00390000010045.g.b.a #10	ENSGT00950000183182.a.a #11	ENSGT01090000260093.b #12	ENSGT00950000182978.B #13	ENSGT01060000248589.D	ENSGT00390000015229.p	ENSGT00390000012569.a.fb.a.b.a ##16	ENSGT00390000006264 #17	ENSGT00950000183168.B.a #18	ENSGT00390000003312 #19	ENSGT00940000157582 #21	ENSGT00940000155543.e #22	ENSGT00940000155543.f #22	ENSGT00940000156139 #23	ENSGT00940000162094 #24	ENSGT00390000002144 #25	ENSGT00410000025596.a.b #26	ENSGT00940000156761	ENSGT00940000157669	ENSGT00940000157833	ENSGT00940000156213	ENSGT00940000156592	ENSGT00940000157151	ENSGT00940000159638	ENSGT00940000153446.a.b	ENSGT00940000160209	ENSGT00910000147267
Cebidae_a	DUPLICATION
Cebidae_a	ANCESTRAL SPECIES																	ENSGT00940000155543.e.a #22
Capuchin	MODERN SPECIES	873																ENSCCAG00000036649 #22	ENSCCAG00000027335	SMPD4 (ENSCCAG00000003676)	ENSCCAG00000024585	TUBA3C (ENSCCAG00000026833)
Bolivian squirrel monkey	MODERN SPECIES	322																ENSSBOG00000029433 #22	ENSSBOG00000032232
Cebidae_a	ANCESTRAL SPECIES																	ENSGT00940000155543.e.b #22
Bolivian squirrel monkey	MODERN SPECIES	59	ATRIP (ENSSBOG00000019674)	TMA7 (ENSSBOG00000025835)	CCDC51 (ENSSBOG00000034836)	PLXNB1 (ENSSBOG00000020914)	FBXW12 (ENSSBOG00000023701)	SPINK8 (ENSSBOG00000027866)	NME6 (ENSSBOG00000021349)	ENSSBOG00000028662	CAMP (ENSSBOG00000034385)	CDC25A (ENSSBOG00000025104)	MAP4 (ENSSBOG00000033564)	DHX30 (ENSSBOG00000035810)	ENSSBOG00000020538	SMARCC1 (ENSSBOG00000034716)	CSPG5 (ENSSBOG00000030429)	ENSSBOG00000034659 #22	ELP6 (ENSSBOG00000009153)	SCAP (ENSSBOG00000027955)	PTPN23 (ENSSBOG00000003424)	KLHL18 (ENSSBOG00000027931)	KIF9 (ENSSBOG00000035834)	ENSSBOG00000009349	SETD2 (ENSSBOG00000018044)	NBEAL2 (ENSSBOG00000032401)	CCDC12 (ENSSBOG00000035443)	PTH1R (ENSSBOG00000025002)	MYL3 (ENSSBOG00000030319)	ENSSBOG00000028992	ENSSBOG00000024974	ENSSBOG00000028894	PRSS50 (ENSSBOG00000031754)
Marmoset	MODERN SPECIES	19	ENSCJAG00000077742	STX12 (ENSCJAG00000009378) #7	PPP1R8 (ENSCJAG00000009406) #8	ENSCJAG00000009445 #9	RPA2 (ENSCJAG00000009473) #10	SMPDL3B (ENSCJAG00000009490) #11	XKR8 (ENSCJAG00000009496) #12	EYA3 (ENSCJAG00000009498) #13	PTAFR (ENSCJAG00000022642)	ENSCJAG00000009556 ##16	ATP5IF1 (ENSCJAG00000048007) #17	SESN2 (ENSCJAG00000009602) #18	MED18 (ENSCJAG00000068482) #19	PHACTR4 (ENSCJAG00000009642) #21	ENSCJAG00000062507	RCC1 (ENSCJAG00000009686) #22	TRNAU1AP (ENSCJAG00000009717) #23	RAB42 (ENSCJAG00000009733) #24	TAF12 (ENSCJAG00000009742) #25	GMEB1 (ENSCJAG00000009754) #26	YTHDF2 (ENSCJAG00000009804)	OPRD1 (ENSCJAG00000009824)	EPB41 (ENSCJAG00000009831)	SRSF4 (ENSCJAG00000047192)	MECR (ENSCJAG00000009994)	PTPRU (ENSCJAG00000010031)	MATN1 (ENSCJAG00000005964)	LAPTM5 (ENSCJAG00000062185)	SDC3 (ENSCJAG00000085360)	ENSCJAG00000073130	PUM1 (ENSCJAG00000006035)
Mas night monkey	MODERN SPECIES	776	ENSANAG00000037952	MIOS (ENSANAG00000031901)	RPA3 (ENSANAG00000021050)	UMAD1 (ENSANAG00000035021)	GLCCI1 (ENSANAG00000022639)	ICA1 (ENSANAG00000037411)	NXPH1 (ENSANAG00000021516)	ENSANAG00000038257	PHF14 (ENSANAG00000037061)	THSD7A (ENSANAG00000022340)	TMEM106B (ENSANAG00000018667)	VWDE (ENSANAG00000019499)	ENSANAG00000000032	SCIN (ENSANAG00000029754)	ENSANAG00000031522	ENSANAG00000029590 #22	ENSANAG00000030559	ETV1 (ENSANAG00000036115)	ENSANAG00000022964	DGKB (ENSANAG00000033587)	AGMO (ENSANAG00000029663)	MEOX2 (ENSANAG00000026696)	CRPPA (ENSANAG00000034796)	SOSTDC1 (ENSANAG00000023489)	LRRC72 (ENSANAG00000032108)	ANKMY2 (ENSANAG00000031294)	BZW2 (ENSANAG00000004675)	TSPAN13 (ENSANAG00000032135)	AGR2 (ENSANAG00000034130)	AGR3 (ENSANAG00000035108)	AHR (ENSANAG00000030085)
Platyrrhini	ANCESTRAL SPECIES		ENSGT01000000214440.A.a.b.a #7	ENSGT00940000156115 #8	ENSGT00530000063770.c.a #9	ENSGT00390000010045.g.b.a #10	ENSGT00950000183182.a.a #11	ENSGT01090000260093.b #12	ENSGT00950000182978.B #13	ENSGT01060000248589.D	ENSGT00390000015229.p	ENSGT00390000012569.a.fb.a.b.a ##16	ENSGT00390000006264 #17	ENSGT00950000183168.B.a #18	ENSGT00390000003312 #19	ENSGT00940000157582 #21	ENSGT00940000155543.e #22	ENSGT00940000155543.f #22	ENSGT00940000156139 #23	ENSGT00940000162094 #24	ENSGT00390000002144 #25	ENSGT00410000025596.a.b #26	ENSGT00940000156761	ENSGT00940000157669	ENSGT00940000157833	ENSGT00530000063698.b	ENSGT00940000156213	ENSGT00940000156592	ENSGT00940000157151	ENSGT00940000159638	ENSGT00940000153446.a.b	ENSGT00940000160209	ENSGT00910000147267
Cebidae	ANCESTRAL SPECIES	1	ENSGT01000000214440.A.a.b.a #7	ENSGT00940000156115 #8	ENSGT00530000063770.c.a #9	ENSGT00390000010045.g.b.a #10	ENSGT00950000183182.a.a #11	ENSGT01090000260093.b #12	ENSGT00950000182978.B #13	ENSGT01060000248589.D	ENSGT00390000015229.p	ENSGT00390000012569.a.fb.a.b.a ##16	ENSGT00390000006264 #17	ENSGT00950000183168.B.a #18	ENSGT00390000003312 #19	ENSGT00940000157582 #21	ENSGT00940000155543.e #22	ENSGT00940000155543.f #22	ENSGT00940000156139 #23	ENSGT00940000162094 #24	ENSGT00390000002144 #25	ENSGT00410000025596.a.b #26	ENSGT00940000156761	ENSGT00940000157669	ENSGT00940000157833	ENSGT00940000156213	ENSGT00940000156592	ENSGT00940000157151	ENSGT00940000159638	ENSGT00940000153446.a.b	ENSGT00940000160209	ENSGT00910000147267	ENSGT00940000158079
Cebidae_a	ANCESTRAL SPECIES		ENSGT00940000160073	ENSGT01000000214440.A.a.b.a #7	ENSGT00940000156115 #8	ENSGT00530000063770.c.a #9	ENSGT00390000010045.g.b.a #10	ENSGT00950000183182.a.a #11	ENSGT01090000260093.b #12	ENSGT00950000182978.B #13	ENSGT00390000012569.a.fb.a.b.b ##16	ENSGT00390000015229.p	ENSGT00390000012569.a.fb.a.b.a ##16	ENSGT00390000006264 #17	ENSGT00950000183168.B.a #18	ENSGT00390000003312 #19	ENSGT00940000157582 #21	ENSGT00940000155543.f #22	ENSGT00940000156139 #23	ENSGT00940000162094 #24	ENSGT00390000002144 #25	ENSGT00410000025596.a.b #26	ENSGT00940000156761	ENSGT00940000157669	ENSGT00940000157833	ENSGT00940000156213	ENSGT00940000156592	ENSGT00940000157151	ENSGT00940000159638	ENSGT00940000153446.a.b	ENSGT00940000160209	ENSGT00910000147267	ENSGT00940000158079
Bolivian squirrel monkey	MODERN SPECIES	260					THEMIS2 (ENSSBOG00000027590) #9	ENSSBOG00000021756 #10	SMPDL3B (ENSSBOG00000004435) #11	XKR8 (ENSSBOG00000001611) #12	EYA3 (ENSSBOG00000032353) #13	ENSSBOG00000023608 ##16	ATP5IF1 (ENSSBOG00000019841) #17	SESN2 (ENSSBOG00000025091) #18	MED18 (ENSSBOG00000012808) #19	PHACTR4 (ENSSBOG00000028484) #21	ENSSBOG00000027297	ENSSBOG00000001098 #22	ENSSBOG00000024457	TRNAU1AP (ENSSBOG00000021299) #23	ENSSBOG00000010940 #24
Capuchin	MODERN SPECIES	87	FAM76A (ENSCCAG00000032340)	ENSCCAG00000031655	STX12 (ENSCCAG00000023253) #7	PPP1R8 (ENSCCAG00000025347) #8	THEMIS2 (ENSCCAG00000035270) #9	RPA2 (ENSCCAG00000025366) ##10	SMPDL3B (ENSCCAG00000023858) #11	XKR8 (ENSCCAG00000033700) #12	EYA3 (ENSCCAG00000024843) #13	ENSCCAG00000027313	DNAJC8 (ENSCCAG00000026898) ##16	ATP5IF1 (ENSCCAG00000037499) #17	SESN2 (ENSCCAG00000032713) #18	MED18 (ENSCCAG00000015706) #19	PHACTR4 (ENSCCAG00000020309) #21	ENSCCAG00000025966 #22	TRNAU1AP (ENSCCAG00000037506) #23	RAB42 (ENSCCAG00000037497) #24	TAF12 (ENSCCAG00000037353) #25	GMEB1 (ENSCCAG00000005580) #26	YTHDF2 (ENSCCAG00000027370)	ENSCCAG00000036720	OPRD1 (ENSCCAG00000032398)	EPB41 (ENSCCAG00000036038)	SRSF4 (ENSCCAG00000033585)	MECR (ENSCCAG00000019564)	PTPRU (ENSCCAG00000030417)
Mas night monkey	MODERN SPECIES	1281	FAM76A (ENSANAG00000034741)	STX12 (ENSANAG00000034764) #7	PPP1R8 (ENSANAG00000011047) #8	THEMIS2 (ENSANAG00000032929) #9	ENSANAG00000033411	SMPDL3B (ENSANAG00000029765) #11	XKR8 (ENSANAG00000020923) #12	EYA3 (ENSANAG00000024390) #13	ENSANAG00000032813	ENSANAG00000033952 ##16	ATP5IF1 (ENSANAG00000029390) #17	SESN2 (ENSANAG00000029947) #18	MED18 (ENSANAG00000034771) #19	PHACTR4 (ENSANAG00000035911) #21	ENSANAG00000029446	ENSANAG00000036884 #22	TRNAU1AP (ENSANAG00000018976) #23	RAB42 (ENSANAG00000035487) #24	TAF12 (ENSANAG00000035455) #25	GMEB1 (ENSANAG00000034422) #26	YTHDF2 (ENSANAG00000032408)	OPRD1 (ENSANAG00000036570)	EPB41 (ENSANAG00000020638)	TMEM200B (ENSANAG00000021732)	SRSF4 (ENSANAG00000037134)	MECR (ENSANAG00000022014)	PTPRU (ENSANAG00000021332)	MATN1 (ENSANAG00000001841)	LAPTM5 (ENSANAG00000020926)	SDC3 (ENSANAG00000024425)	PUM1 (ENSANAG00000027865)
Tarsier	MODERN SPECIES	6004												GRK6 (ENSTSYG00000035570)	ENSTSYG00000028949	MED18 (ENSTSYG00000036419) #19	PHACTR4 (ENSTSYG00000010639) #21	RCC1 (ENSTSYG00000012633) #22	TRNAU1AP (ENSTSYG00000003506) #23
Strepsirrhini	ANCESTRAL SPECIES		ENSGT00940000163178	ENSGT00940000160073	ENSGT01000000214440.A.a.b.a #7	ENSGT00940000156115 #8	ENSGT00530000063770.c.a #9	ENSGT00390000010045 #10	ENSGT00950000183182.a.a #11	ENSGT01090000260093.b #12	ENSGT00950000182978.B #13	ENSGT01060000248589.D	ENSGT00390000012569.a #16	ENSGT00390000006264 #17	ENSGT00950000183168.B.a #18	ENSGT00390000003312 #19	ENSGT00940000157582 #21	ENSGT00940000155543 #22	ENSGT00940000156139 #23	ENSGT00940000162094 #24	ENSGT00940000164873	ENSGT00390000002144 #25	ENSGT00410000025596.a.b #26	ENSGT00940000156761	ENSGT00940000157669	ENSGT00940000157833	ENSGT00530000063698.b	ENSGT00940000156213	ENSGT00940000156592	ENSGT00940000157151	ENSGT00940000159638	ENSGT00940000153446.a.b	ENSGT00940000160209
Lemuriformes	ANCESTRAL SPECIES		ENSGT00940000163178	ENSGT00940000160073	ENSGT01000000214440.A.a.b.a #7	ENSGT00940000156115 #8	ENSGT00530000063770.c.a #9	ENSGT00390000010045 #10	ENSGT00950000183182.a.a #11	ENSGT01090000260093.b #12	ENSGT00950000182978.B #13	ENSGT01060000248589.D	ENSGT00390000012569.a.`b #16	ENSGT00390000006264 #17	ENSGT00950000183168.B.a #18	ENSGT00390000003312 #19	ENSGT00940000157582 #21	ENSGT00940000155543 #22	ENSGT00940000156139 #23	ENSGT00940000162094 #24	ENSGT00940000164873	ENSGT00390000002144 #25	ENSGT00410000025596.a.b #26	ENSGT00940000156761	ENSGT00940000157669	ENSGT00940000157833	ENSGT00530000063698.b	ENSGT00940000156213	ENSGT00940000156592	ENSGT00940000157151	ENSGT00940000159638	ENSGT00940000153446.a.b	ENSGT00940000160209
Lemuriformes_a	ANCESTRAL SPECIES	7	ENSGT00940000163178	ENSGT00940000160073	ENSGT01000000214440.A.a.b.a #7	ENSGT00940000156115 #8	ENSGT00530000063770.c.a #9	ENSGT00390000010045 #10	ENSGT00950000183182.a.a #11	ENSGT01090000260093.b #12	ENSGT00950000182978.B #13	ENSGT01060000248589.D	ENSGT00390000012569.a.`b #16	ENSGT00390000006264 #17	ENSGT00950000183168.B.a #18	ENSGT00390000003312 #19	ENSGT00940000157582 #21	ENSGT00940000155543 #22	ENSGT00940000156139 #23	ENSGT00940000162094 #24	ENSGT00940000164873	ENSGT00390000002144 #25	ENSGT00410000025596.a.b #26	ENSGT00940000156761	ENSGT00940000157669	ENSGT00940000157833	ENSGT00530000063698.b	ENSGT00940000156213	ENSGT00940000156592	ENSGT00940000157151
Coquerels sifaka	MODERN SPECIES	344	AHDC1 (ENSPCOG00000012355)	FGR (ENSPCOG00000021101)	IFI6 (ENSPCOG00000019541)	FAM76A (ENSPCOG00000017956)	STX12 (ENSPCOG00000014712) #7	PPP1R8 (ENSPCOG00000013455) #8	THEMIS2 (ENSPCOG00000002667) #9	RPA2 (ENSPCOG00000023673) #10	SMPDL3B (ENSPCOG00000026165) #11	XKR8 (ENSPCOG00000009916) #12	EYA3 (ENSPCOG00000009524) #13	ATP5IF1 (ENSPCOG00000028473) #17	SESN2 (ENSPCOG00000023322) #18	MED18 (ENSPCOG00000022541) #19	PHACTR4 (ENSPCOG00000015433) #21	RCC1 (ENSPCOG00000015509) #22	ENSPCOG00000027712 #23	RAB42 (ENSPCOG00000008605) #24	TAF12 (ENSPCOG00000017974) #25	GMEB1 (ENSPCOG00000028438) #26	YTHDF2 (ENSPCOG00000010131)	ENSPCOG00000020601	OPRD1 (ENSPCOG00000018592)	EPB41 (ENSPCOG00000021118)	SRSF4 (ENSPCOG00000027341)	MECR (ENSPCOG00000018330)	PTPRU (ENSPCOG00000025974)
Greater bamboo lemur	MODERN SPECIES	122							SMPDL3B (ENSPSMG00000010811) #11	XKR8 (ENSPSMG00000010782) #12	EYA3 (ENSPSMG00000010772) #13	PTAFR (ENSPSMG00000010713)	DNAJC8 (ENSPSMG00000010707) #16	ATP5IF1 (ENSPSMG00000010696) #17	SESN2 (ENSPSMG00000010685) #18	MED18 (ENSPSMG00000010662) #19	PHACTR4 (ENSPSMG00000010641) #21	RCC1 (ENSPSMG00000010510) #22	TRNAU1AP (ENSPSMG00000010448) #23	RAB42 (ENSPSMG00000010409) #24	ENSPSMG00000010403	TAF12 (ENSPSMG00000010398) #25	GMEB1 (ENSPSMG00000010381) #26	ENSPSMG00000010343	YTHDF2 (ENSPSMG00000010340)	OPRD1 (ENSPSMG00000010321)	EPB41 (ENSPSMG00000009246)	TMEM200B (ENSPSMG00000008276)	SRSF4 (ENSPSMG00000008263)	MECR (ENSPSMG00000008225)	PTPRU (ENSPSMG00000008032)
Mouse lemur	MODERN SPECIES	11	ENSMICG00000011066 #7	PPP1R8 (ENSMICG00000043807) #8	ENSMICG00000036349	THEMIS2 (ENSMICG00000011084) #9	RPA2 (ENSMICG00000042716) #10	SMPDL3B (ENSMICG00000011091) #11	XKR8 (ENSMICG00000047287) #12	EYA3 (ENSMICG00000011109) #13	PTAFR (ENSMICG00000047486)	ENSMICG00000001222 #16	ATP5IF1 (ENSMICG00000001227) #17	ENSMICG00000035317	SESN2 (ENSMICG00000037742) #18	MED18 (ENSMICG00000006508) #19	PHACTR4 (ENSMICG00000037236) #21	RCC1 (ENSMICG00000047487) #22	TRNAU1AP (ENSMICG00000008386) #23	RAB42 (ENSMICG00000029915) #24	TAF12 (ENSMICG00000033777) #25	GMEB1 (ENSMICG00000046821) #26	YTHDF2 (ENSMICG00000003729)	OPRD1 (ENSMICG00000003731)	ENSMICG00000027839	SRSF4 (ENSMICG00000043567)	MECR (ENSMICG00000008974)	PTPRU (ENSMICG00000008985)	MATN1 (ENSMICG00000011541)	LAPTM5 (ENSMICG00000011554)	SDC3 (ENSMICG00000034678)	ENSMICG00000007713	NKAIN1 (ENSMICG00000009329)
Bushbaby	MODERN SPECIES	299															PHACTR4 (ENSOGAG00000015245) #21	RCC1 (ENSOGAG00000007487) #22	RAB42 (ENSOGAG00000006951) #24	TAF12 (ENSOGAG00000026358) #25	TRNAU1AP (ENSOGAG00000002274) #23	GMEB1 (ENSOGAG00000006956) #26	YTHDF2 (ENSOGAG00000014648)	OPRD1 (ENSOGAG00000025601)	ENSOGAG00000025718	EPB41 (ENSOGAG00000001603)	TMEM200B (ENSOGAG00000025912)	SRSF4 (ENSOGAG00000015515)	MECR (ENSOGAG00000015520)	PTPRU (ENSOGAG00000015523)	MATN1 (ENSOGAG00000014950)	LAPTM5 (ENSOGAG00000014958)	ENSOGAG00000033118
Euarchontoglires_A	ANCESTRAL SPECIES		ENSGT00940000157554	ENSGT00940000160073	ENSGT01000000214440.A.a.b.a #7	ENSGT00940000156115 #8	ENSGT00530000063770.c.a #9	ENSGT00390000010045 #10	ENSGT00950000183182.a.a #11	ENSGT01090000260093.b #12	ENSGT00950000182978.B #13	ENSGT01060000248589.D	ENSGT00390000012569.a #16	ENSGT00390000006264 #17	ENSGT00950000183168.B.a #18	ENSGT00390000003312 #19	ENSGT00940000157582 #21	ENSGT00940000155543 #22	ENSGT00940000156139 #23	ENSGT00940000162094 #24	ENSGT00390000002144 #25	ENSGT00410000025596.a.b #26	ENSGT00940000156761	ENSGT00940000157669	ENSGT00940000157833	ENSGT00530000063698.b	ENSGT00940000156213	ENSGT00940000156592	ENSGT00940000157151	ENSGT00940000159638	ENSGT00940000153446.a.b	ENSGT00940000160209	ENSGT00940000158079
Glires	ANCESTRAL SPECIES		ENSGT00940000157554	ENSGT00940000160073	ENSGT01000000214440.A.a.b.a #7	ENSGT00940000156115 #8	ENSGT00530000063770.c.a #9	ENSGT00390000010045 #10	ENSGT00950000183182.a.a #11	ENSGT01090000260093.b #12	ENSGT00950000182978.B #13	ENSGT01060000248589.D	ENSGT00390000012569.a #16	ENSGT00390000006264 #17	ENSGT00950000183168.B.a #18	ENSGT00390000003312 #19	ENSGT00940000157582 #21	ENSGT00940000155543 #22	ENSGT00940000156139 #23	ENSGT00940000162094 #24	ENSGT00390000002144 #25	ENSGT00410000025596.a.b #26	ENSGT00940000156761	ENSGT00940000157669	ENSGT00940000157833	ENSGT00530000063698.b	ENSGT00940000156213	ENSGT00940000156592	ENSGT00940000157151	ENSGT00940000159638	ENSGT00940000153446.a.b	ENSGT00940000160209	ENSGT00940000158079
Rodentia	ANCESTRAL SPECIES		ENSGT00940000157554	ENSGT00940000160073	ENSGT01000000214440.A.a.b.a #7	ENSGT00940000156115 #8	ENSGT00530000063770.c.a #9	ENSGT00390000010045 #10	ENSGT00950000183182.a.a #11	ENSGT01090000260093.b #12	ENSGT00950000182978.B #13	ENSGT01060000248589.D	ENSGT00390000012569.a #16	ENSGT00390000006264 #17	ENSGT00950000183168.B.a #18	ENSGT00390000003312 #19	ENSGT00940000157582 #21	ENSGT00940000155543 #22	ENSGT00940000156139 #23	ENSGT00940000162094 #24	ENSGT00390000002144 #25	ENSGT00410000025596.a.b #26	ENSGT00940000156761	ENSGT00940000157669	ENSGT00940000157833	ENSGT00530000063698.b	ENSGT00940000156213	ENSGT00940000156592	ENSGT00940000157151	ENSGT00940000159638	ENSGT00940000153446.a.b	ENSGT00940000160209	ENSGT00940000158079
Rodentia_B	ANCESTRAL SPECIES		ENSGT00940000157554	ENSGT00940000160073	ENSGT01000000214440.A.a.b.a #7	ENSGT00940000156115 #8	ENSGT00530000063770.c.a #9	ENSGT00390000010045 #10	ENSGT00950000183182.a.a #11	ENSGT01090000260093.b #12	ENSGT00950000182978.B #13	ENSGT01060000248589.D	ENSGT00390000012569.a #16	ENSGT00390000006264 #17	ENSGT00950000183168.B.a #18	ENSGT00390000003312 #19	ENSGT00940000157582 #21	ENSGT00940000155543 #22	ENSGT00940000156139 #23	ENSGT00940000162094 #24	ENSGT00390000002144 #25	ENSGT00410000025596.a.b #26	ENSGT00940000156761	ENSGT00940000157669	ENSGT00940000157833	ENSGT00530000063698.b	ENSGT00940000156213	ENSGT00940000156592	ENSGT00940000157151	ENSGT00940000159638	ENSGT00940000153446.a.b	ENSGT00940000160209	ENSGT00940000158079
Myomorpha	ANCESTRAL SPECIES	3	ENSGT00940000157554	ENSGT00940000160073	ENSGT01000000214440.A.a.b.a #7	ENSGT00940000156115 #8	ENSGT00530000063770.c.a #9	ENSGT00390000010045 #10	ENSGT00950000183182.a.a #11	ENSGT01090000260093.b #12	ENSGT00950000182978.B #13	ENSGT01060000248589.D	ENSGT00390000012569.a #16	ENSGT00390000006264 #17	ENSGT00950000183168.B.a #18	ENSGT00390000003312 #19	ENSGT00940000157582 #21	ENSGT00940000155543 #22	ENSGT00940000156139 #23	ENSGT00940000162094 #24	ENSGT00390000002144 #25	ENSGT00410000025596.a.b #26	ENSGT00940000156761	ENSGT00940000157669	ENSGT00940000157833	ENSGT00530000063698.b	ENSGT00940000156213	ENSGT00940000156592	ENSGT00940000157151	ENSGT00940000159638	ENSGT00940000153446.a.b	ENSGT00940000160209	ENSGT00940000158079
Muroidea	ANCESTRAL SPECIES	3	ENSGT00940000157554	ENSGT00940000160073	ENSGT01000000214440.A.a.b.a #7	ENSGT00940000156115 #8	ENSGT00530000063770.c.a #9	ENSGT00390000010045 #10	ENSGT00950000183182.a.a #11	ENSGT01090000260093.b #12	ENSGT00950000182978.B #13	ENSGT01060000248589.D	ENSGT00390000012569.a #16	ENSGT00390000006264 #17	ENSGT00950000183168.B.a #18	ENSGT00390000003312 #19	ENSGT00940000157582 #21	ENSGT00940000155543 #22	ENSGT00940000156139 #23	ENSGT00940000162094 #24	ENSGT00390000002144 #25	ENSGT00410000025596.a.b #26	ENSGT00940000156761	ENSGT00940000157669	ENSGT00940000157833	ENSGT00530000063698.b	ENSGT00940000156213	ENSGT00940000156592	ENSGT00940000157151	ENSGT00940000159638	ENSGT00940000153446.a.b	ENSGT00940000160209	ENSGT00940000158079
Muroidea_A	ANCESTRAL SPECIES	3	ENSGT00940000157554	ENSGT00940000160073	ENSGT01000000214440.A.a.b.a #7	ENSGT00940000156115 #8	ENSGT00530000063770.c.a #9	ENSGT00390000010045 #10	ENSGT00950000183182.a.a #11	ENSGT01090000260093.b #12	ENSGT00950000182978.B #13	ENSGT01060000248589.D	ENSGT00390000012569.a #16	ENSGT00390000006264 #17	ENSGT00950000183168.B.a #18	ENSGT00390000003312 #19	ENSGT00940000157582 #21	ENSGT00940000155543 #22	ENSGT00940000156139 #23	ENSGT00940000162094 #24	ENSGT00390000002144 #25	ENSGT00410000025596.a.b #26	ENSGT00940000156761	ENSGT00940000157669	ENSGT00860000135912	ENSGT00940000157833	ENSGT00530000063698.b	ENSGT00940000156213	ENSGT00940000156592	ENSGT00940000157151	ENSGT00940000159638	ENSGT00940000153446.a.b	ENSGT00940000160209
Cricetidae	ANCESTRAL SPECIES	2	ENSGT00390000018883	ENSGT00940000157554	ENSGT00940000160073	ENSGT01000000214440.A.a.b.a #7	ENSGT00940000156115 #8	ENSGT00530000063770.c.a #9	ENSGT00390000010045 #10	ENSGT00950000183182.a.a #11	ENSGT01090000260093.b #12	ENSGT00950000182978.B #13	ENSGT01060000248589.D	ENSGT00940000164617	ENSGT00950000183168.B.a #18	ENSGT00390000003312 #19	ENSGT00940000157582 #21	ENSGT00940000155543 #22	ENSGT00940000156139 #23	ENSGT00940000162094 #24	ENSGT00390000002144 #25	ENSGT00410000025596.a.b #26	ENSGT00940000156761	ENSGT00940000157669	ENSGT00860000135912	ENSGT00940000157833	ENSGT00530000063698.b	ENSGT00940000156213	ENSGT00940000156592	ENSGT00940000157151	ENSGT00940000159638	ENSGT00940000153446.a.b	ENSGT00940000160209
Cricetinae	ANCESTRAL SPECIES	5	ENSGT00940000157554	ENSGT00940000160073	ENSGT01000000214440.A.a.b.a #7	ENSGT00940000156115 #8	ENSGT00530000063770.c.a #9	ENSGT00390000010045 #10	ENSGT00950000183182.a.a #11	ENSGT01090000260093.b #12	ENSGT00950000182978.B #13	ENSGT01060000248589.D	ENSGT00390000012569.a #16	ENSGT00390000006264 #17	ENSGT00950000183168.B.a #18	ENSGT00390000003312 #19	ENSGT00940000157582 #21	ENSGT00940000155543 #22	ENSGT00940000156139 #23	ENSGT00940000162094 #24	ENSGT00390000002144 #25	ENSGT00410000025596.a.b #26	ENSGT00940000156761	ENSGT00940000157669	ENSGT00860000135912	ENSGT00940000157833	ENSGT00530000063698.b	ENSGT00940000156213	ENSGT00940000156592	ENSGT00940000157151	ENSGT00940000159638	ENSGT00940000153446.a.b	ENSGT00940000160209
Chinese hamster chok1gshd	DUPLICATION
Chinese hamster chok1gshd	MODERN SPECIES	111	Fgr (ENSCGRG00001024485)	ENSCGRG00001007863	Stx12 (ENSCGRG00001016934) #7	Ppp1r8 (ENSCGRG00001019839) #8	Themis2 (ENSCGRG00001024729) #9	Rpa2 (ENSCGRG00001007332) #10	Smpdl3b (ENSCGRG00001016883) #11	Xkr8 (ENSCGRG00001017118) #12	Eya3 (ENSCGRG00001018576) #13	Ptafr (ENSCGRG00001012404)	ENSCGRG00001000534 #16	Atpif1 (ENSCGRG00001023397) #17	Sesn2 (ENSCGRG00001020650) #18	MED18 (ENSCGRG00001022480) #19	Phactr4 (ENSCGRG00001021956) #21	ENSCGRG00001023596 #22	Trnau1ap (ENSCGRG00001004713) #23	Rab42 (ENSCGRG00001019426) #24	Taf12 (ENSCGRG00001024959) #25	Gmeb1 (ENSCGRG00001022851) #26	Ythdf2 (ENSCGRG00001016726)	Oprd1 (ENSCGRG00001010255)	ENSCGRG00001024915	Epb41 (ENSCGRG00001021983)	Tmem200b (ENSCGRG00001010757)	Srsf4 (ENSCGRG00001021115)	Mecr (ENSCGRG00001024597)	Ptpru (ENSCGRG00001023937)	Matn1 (ENSCGRG00001019479)	Laptm5 (ENSCGRG00001021108)	Sdc3 (ENSCGRG00001023681)
Chinese hamster chok1gshd	MODERN SPECIES	1	ENSCGRG00001010369	2210408I21Rik (ENSCGRG00001009297)	Slf1 (ENSCGRG00001007173)	Mctp1 (ENSCGRG00001011214)	ENSCGRG00001007825	Fam81b (ENSCGRG00001005643)	Skic3 (ENSCGRG00001016182)	Arsk (ENSCGRG00001019637)	ENSCGRG00001010656	Rfesd (ENSCGRG00001018403)	Spata9 (ENSCGRG00001018426)	Rhobtb3 (ENSCGRG00001016766)	Glrx (ENSCGRG00001012408)	Ell2 (ENSCGRG00001012065)	Pcsk1 (ENSCGRG00001012020)	ENSCGRG00001007082 #22	Cast (ENSCGRG00001002654)	Erap1 (ENSCGRG00001007105)	ENSCGRG00001007786	ENSCGRG00001008373	Lnpep (ENSCGRG00001016259)	Lix1 (ENSCGRG00001017834)	Riok2 (ENSCGRG00001000871)	ENSCGRG00001024900	ENSCGRG00001009968	Rgmb (ENSCGRG00001012341)	Chd1 (ENSCGRG00001023943)	Prdm9 (ENSCGRG00001005716)	Pdcd2 (ENSCGRG00001010000)	Tbp (ENSCGRG00001001372)	Psmb1 (ENSCGRG00001009770)
Golden Hamster	MODERN SPECIES	709	Ahdc1 (ENSMAUG00000013108)	Fgr (ENSMAUG00000006765)	Fam76a (ENSMAUG00000016561)	Stx12 (ENSMAUG00000016314) #7	Ppp1r8 (ENSMAUG00000009797) #8	Themis2 (ENSMAUG00000000821) #9	Rpa2 (ENSMAUG00000002825) #10	Smpdl3b (ENSMAUG00000014184) #11	Xkr8 (ENSMAUG00000009395) #12	Eya3 (ENSMAUG00000015674) #13	Ptafr (ENSMAUG00000008850)	ENSMAUG00000018320	Sesn2 (ENSMAUG00000000726) #18	Med18 (ENSMAUG00000019176) #19	Phactr4 (ENSMAUG00000018484) #21	Rcc1 (ENSMAUG00000020618) #22	ENSMAUG00000020183	Rab42 (ENSMAUG00000020223) #24	Taf12 (ENSMAUG00000019991) #25	Gmeb1 (ENSMAUG00000008912) #26	ENSMAUG00000010032	Oprd1 (ENSMAUG00000012704)	ENSMAUG00000001636	Tmem200b (ENSMAUG00000021672)	Srsf4 (ENSMAUG00000021940)	Mecr (ENSMAUG00000021996)	Ptpru (ENSMAUG00000016330)	Matn1 (ENSMAUG00000019156)	Laptm5 (ENSMAUG00000013566)	Pum1 (ENSMAUG00000022090)	Nkain1 (ENSMAUG00000010811)
Cricetidae_B	ANCESTRAL SPECIES	2	ENSGT00940000157554	ENSGT00940000160073	ENSGT01000000214440.A.a.b.a #7	ENSGT00940000156115 #8	ENSGT00530000063770.c.a #9	ENSGT00390000010045 #10	ENSGT00950000183182.a.a #11	ENSGT01090000260093.b #12	ENSGT00950000182978.B #13	ENSGT01060000248589.D	ENSGT00390000012569.a #16	ENSGT00390000006264 #17	ENSGT00950000183168.B.a #18	ENSGT00390000003312 #19	ENSGT00940000157582 #21	ENSGT00940000155543 #22	ENSGT00940000156139 #23	ENSGT00940000162094 #24	ENSGT00390000002144 #25	ENSGT00410000025596.a.b #26	ENSGT00940000156761	ENSGT00940000157669	ENSGT00940000157833	ENSGT00530000063698.b	ENSGT00940000156213	ENSGT00940000156592	ENSGT00940000157151	ENSGT00940000159638	ENSGT00940000153446.a.b	ENSGT00940000160209	ENSGT00940000158079
Northern American deer mouse	MODERN SPECIES	11	ENSPEMG00000014678	Stx12 (ENSPEMG00000025346) #7	Ppp1r8 (ENSPEMG00000003512) #8	Themis2 (ENSPEMG00000008336) #9	Rpa2 (ENSPEMG00000006270) #10	Smpdl3b (ENSPEMG00000003316) #11	Xkr8 (ENSPEMG00000025921) #12	Eya3 (ENSPEMG00000000391) #13	Ptafr (ENSPEMG00000025544)	Dnajc8 (ENSPEMG00000013544) #16	Atpif1 (ENSPEMG00000025196) #17	Sesn2 (ENSPEMG00000001779) #18	Med18 (ENSPEMG00000015562) #19	ENSPEMG00000004708	Phactr4 (ENSPEMG00000000179) #21	Rcc1 (ENSPEMG00000016697) #22	Trnau1ap (ENSPEMG00000007877) #23	Rab42 (ENSPEMG00000027698) #24	Taf12 (ENSPEMG00000015879) #25	Ythdf2 (ENSPEMG00000014903)	Oprd1 (ENSPEMG00000007805)	Epb41 (ENSPEMG00000016438)	Tmem200b (ENSPEMG00000012688)	Srsf4 (ENSPEMG00000003365)	Mecr (ENSPEMG00000009582)	Ptpru (ENSPEMG00000010874)	Matn1 (ENSPEMG00000017513)	Laptm5 (ENSPEMG00000016483)	Sdc3 (ENSPEMG00000015709)	Pum1 (ENSPEMG00000010009)	Nkain1 (ENSPEMG00000000116)
Prairie vole	MODERN SPECIES	1	Fgr (ENSMOCG00000019562)	Fam76a (ENSMOCG00000021395)	Stx12 (ENSMOCG00000014196) #7	ENSMOCG00000022691 #8	Themis2 (ENSMOCG00000003168) #9	Rpa2 (ENSMOCG00000007092) #10	Smpdl3b (ENSMOCG00000016324) #11	Xkr8 (ENSMOCG00000002218) #12	Eya3 (ENSMOCG00000004582) #13	Ptafr (ENSMOCG00000013409)	Dnajc8 (ENSMOCG00000017213) #16	Atpif1 (ENSMOCG00000002419) #17	Sesn2 (ENSMOCG00000012718) #18	Med18 (ENSMOCG00000022182) #19	Phactr4 (ENSMOCG00000012753) #21	Rcc1 (ENSMOCG00000016589) #22	Trnau1ap (ENSMOCG00000011189) #23	Rab42 (ENSMOCG00000021639) #24	Taf12 (ENSMOCG00000006333) #25	Gmeb1 (ENSMOCG00000012332) #26	Ythdf2 (ENSMOCG00000018361)	Oprd1 (ENSMOCG00000018388)	Epb41 (ENSMOCG00000022373)	Tmem200b (ENSMOCG00000014010)	Srsf4 (ENSMOCG00000013319)	Mecr (ENSMOCG00000017926)	Ptpru (ENSMOCG00000019862)	Matn1 (ENSMOCG00000011816)	Laptm5 (ENSMOCG00000014297)	Sdc3 (ENSMOCG00000020345)	Pum1 (ENSMOCG00000015463)
Murinae	ANCESTRAL SPECIES	2	ENSGT00940000157554	ENSGT00940000160073	ENSGT01000000214440.A.a.b.a #7	ENSGT00940000156115 #8	ENSGT00530000063770.c.a #9	ENSGT00390000010045 #10	ENSGT00950000183182.a.a #11	ENSGT01090000260093.b #12	ENSGT00950000182978.B #13	ENSGT01060000248589.D	ENSGT00390000012569.a #16	ENSGT00390000006264 #17	ENSGT00950000183168.B.a #18	ENSGT00390000003312 #19	ENSGT00940000157582 #21	ENSGT00940000155543 #22	ENSGT00940000156139 #23	ENSGT00940000162094 #24	ENSGT00390000002144 #25	ENSGT00410000025596.a.b #26	ENSGT00940000156761	ENSGT00940000157669	ENSGT00860000135912	ENSGT00940000157833	ENSGT00530000063698.b	ENSGT00940000156213	ENSGT00940000156592	ENSGT00940000157151	ENSGT00940000159638	ENSGT00940000153446.a.b	ENSGT00940000160209
Mus	ANCESTRAL SPECIES	3	ENSGT00940000157554	ENSGT00940000160073	ENSGT01000000214440.A.a.b.a #7	ENSGT00940000156115 #8	ENSGT00530000063770.c.a #9	ENSGT00390000010045 #10	ENSGT00950000183182.a.a #11	ENSGT01090000260093.b #12	ENSGT00950000182978.B #13	ENSGT01060000248589.D	ENSGT00390000012569.a #16	ENSGT00390000006264 #17	ENSGT00950000183168.B.a #18	ENSGT00390000003312 #19	ENSGT00940000157582 #21	ENSGT00940000155543 #22	ENSGT00940000156139 #23	ENSGT00940000162094 #24	ENSGT00390000002144 #25	ENSGT00410000025596.a.b #26	ENSGT00940000156761	ENSGT00940000157669	ENSGT00860000135912	ENSGT00940000157833	ENSGT00530000063698.b	ENSGT00940000156213	ENSGT00940000156592	ENSGT00940000157151	ENSGT00940000159638	ENSGT00940000153446.a.b	ENSGT00940000160209
Mus_A	ANCESTRAL SPECIES	3	ENSGT00940000157554	ENSGT00940000160073	ENSGT01000000214440.A.a.b.a #7	ENSGT00940000156115 #8	ENSGT00530000063770.c.a #9	ENSGT00390000010045 #10	ENSGT00950000183182.a.a #11	ENSGT01090000260093.b #12	ENSGT00950000182978.B #13	ENSGT01060000248589.D	ENSGT00390000012569.a #16	ENSGT00390000006264 #17	ENSGT00950000183168.B.a #18	ENSGT00390000003312 #19	ENSGT00940000157582 #21	ENSGT00940000155543 #22	ENSGT00940000156139 #23	ENSGT00940000162094 #24	ENSGT00390000002144 #25	ENSGT00410000025596.a.b #26	ENSGT00940000156761	ENSGT00940000157669	ENSGT00860000135912	ENSGT00940000157833	ENSGT00530000063698.b	ENSGT00940000156213	ENSGT00940000156592	ENSGT00940000157151	ENSGT00940000159638	ENSGT00940000153446.a.b	ENSGT00940000160209
Mus_B	ANCESTRAL SPECIES	5	ENSGT00940000157554	ENSGT00940000160073	ENSGT01000000214440.A.a.b.a #7	ENSGT00940000156115 #8	ENSGT00530000063770.c.a #9	ENSGT00390000010045 #10	ENSGT00950000183182.a.a #11	ENSGT01090000260093.b #12	ENSGT00950000182978.B #13	ENSGT01060000248589.D	ENSGT00390000012569.a #16	ENSGT00390000006264 #17	ENSGT00950000183168.B.a #18	ENSGT00390000003312 #19	ENSGT00940000157582 #21	ENSGT00940000155543 #22	ENSGT00940000156139 #23	ENSGT00940000162094 #24	ENSGT00390000002144 #25	ENSGT00410000025596.a.b #26	ENSGT00940000156761	ENSGT00940000157669	ENSGT00860000135912	ENSGT00940000157833	ENSGT00530000063698.b	ENSGT00940000156213	ENSGT00940000156592	ENSGT00940000157151	ENSGT00940000159638	ENSGT00940000153446.a.b	ENSGT00940000160209
Mouse	MODERN SPECIES	13	Fgr (ENSMUSG00000028874)	Fam76a (ENSMUSG00000028878)	Stx12 (ENSMUSG00000028879) #7	Ppp1r8 (ENSMUSG00000028882) #8	Themis2 (ENSMUSG00000037731) #9	Rpa2 (ENSMUSG00000028884) #10	Smpdl3b (ENSMUSG00000028885) #11	Xkr8 (ENSMUSG00000037752) #12	Eya3 (ENSMUSG00000028886) #13	Ptafr (ENSMUSG00000056529)	Dnajc8 (ENSMUSG00000054405) #16	Atpif1 (ENSMUSG00000054428) #17	Sesn2 (ENSMUSG00000028893) #18	Med18 (ENSMUSG00000066042) #19	Phactr4 (ENSMUSG00000066043) #21	Rcc1 (ENSMUSG00000028896) #22	Trnau1ap (ENSMUSG00000028898) #23	Rab42 (ENSMUSG00000089687) #24	Taf12 (ENSMUSG00000028899) #25	Gmeb1 (ENSMUSG00000028901) #26	Ythdf2 (ENSMUSG00000040025)	Oprd1 (ENSMUSG00000050511)	Epb41 (ENSMUSG00000028906)	Tmem200b (ENSMUSG00000070720)	Srsf4 (ENSMUSG00000028911)	Mecr (ENSMUSG00000028910)	Ptpru (ENSMUSG00000028909)	Matn1 (ENSMUSG00000040533)	Laptm5 (ENSMUSG00000028581)	Sdc3 (ENSMUSG00000025743)	Pum1 (ENSMUSG00000028580)
Mus_C	ANCESTRAL SPECIES	2	ENSGT00940000157554	ENSGT00940000160073.g	ENSGT01000000214440.A.a.b.a #7	ENSGT00940000156115 #8	ENSGT00530000063770.c.a #9	ENSGT00390000010045 #10	ENSGT00950000183182.a.a #11	ENSGT01090000260093.b #12	ENSGT00950000182978.B #13	ENSGT01060000248589.D	ENSGT00390000012569.a #16	ENSGT00390000006264 #17	ENSGT00950000183168.B.a #18	ENSGT00390000003312 #19	ENSGT00940000157582 #21	ENSGT00940000155543 #22	ENSGT00940000156139 #23	ENSGT00940000162094 #24	ENSGT00390000002144 #25	ENSGT00410000025596.a.b #26	ENSGT00940000156761	ENSGT00940000157669	ENSGT00860000135912	ENSGT00940000157833	ENSGT00530000063698.b	ENSGT00940000156213	ENSGT00940000156592	ENSGT00940000157151	ENSGT00940000159638	ENSGT00940000153446.a.b	ENSGT00940000160209
Steppe mouse	MODERN SPECIES	2797				Themis2 (ENSMSIG00000008497) #9	Rpa2 (ENSMSIG00000008505) #10	Smpdl3b (ENSMSIG00000008523) #11	Eya3 (ENSMSIG00000008546) #13	Xkr8 (ENSMSIG00000008821) #12	Ptafr (ENSMSIG00000008840)	Dnajc8 (ENSMSIG00000008847) #16	ENSMSIG00000009011	Atpif1 (ENSMSIG00000009020) #17	Sesn2 (ENSMSIG00000009040) #18	Med18 (ENSMSIG00000009082) #19	Phactr4 (ENSMSIG00000009106) #21	Rcc1 (ENSMSIG00000009244) #22	ENSMSIG00000009341 #23	Rab42 (ENSMSIG00000009484) #24	Taf12 (ENSMSIG00000009505) #25	Gmeb1 (ENSMSIG00000009569) #26	ENSMSIG00000009595	ENSMSIG00000009602	Oprd1 (ENSMSIG00000009620)	Epb41 (ENSMSIG00000009639)	ENSMSIG00000012064	Tmem200b (ENSMSIG00000012073)
spretus	MODERN SPECIES	13	Fgr (MGP_SPRETEiJ_G0027560)	Fam76a (MGP_SPRETEiJ_G0027559)	Stx12 (MGP_SPRETEiJ_G0027558) #7	Ppp1r8 (MGP_SPRETEiJ_G0027557) #8	Themis2 (MGP_SPRETEiJ_G0027556) #9	Rpa2 (MGP_SPRETEiJ_G0027555) #10	Smpdl3b (MGP_SPRETEiJ_G0027554) #11	Xkr8 (MGP_SPRETEiJ_G0027553) #12	Eya3 (MGP_SPRETEiJ_G0027552) #13	Ptafr (MGP_SPRETEiJ_G0027551)	Dnajc8 (MGP_SPRETEiJ_G0027550) #16	Atpif1 (MGP_SPRETEiJ_G0027549) #17	Sesn2 (MGP_SPRETEiJ_G0027548) #18	Med18 (MGP_SPRETEiJ_G0027547) #19	Phactr4 (MGP_SPRETEiJ_G0027546) #21	Rcc1 (MGP_SPRETEiJ_G0027545) #22	Trnau1ap (MGP_SPRETEiJ_G0027544) #23	Rab42 (MGP_SPRETEiJ_G0027543) #24	Taf12 (MGP_SPRETEiJ_G0027542) #25	Gmeb1 (MGP_SPRETEiJ_G0027541) #26	MGP_SPRETEiJ_G0027540	Oprd1 (MGP_SPRETEiJ_G0027539)	MGP_SPRETEiJ_G0027538	Epb41 (MGP_SPRETEiJ_G0027537)	Tmem200b (MGP_SPRETEiJ_G0027536)	Srsf4 (MGP_SPRETEiJ_G0027535)	MGP_SPRETEiJ_G0027534	Ptpru (MGP_SPRETEiJ_G0027533)	Matn1 (MGP_SPRETEiJ_G0027532)	Laptm5 (MGP_SPRETEiJ_G0027531)	Sdc3 (MGP_SPRETEiJ_G0027530)
Ryukyu mouse	MODERN SPECIES	13	Fgr (MGP_CAROLIEiJ_G0026579)	Fam76a (MGP_CAROLIEiJ_G0026578)	Stx12 (MGP_CAROLIEiJ_G0026577) #7	Ppp1r8 (MGP_CAROLIEiJ_G0026576) #8	Themis2 (MGP_CAROLIEiJ_G0026575) #9	Rpa2 (MGP_CAROLIEiJ_G0026574) #10	Smpdl3b (MGP_CAROLIEiJ_G0026573) #11	Xkr8 (MGP_CAROLIEiJ_G0026572) #12	Eya3 (MGP_CAROLIEiJ_G0026571) #13	Ptafr (MGP_CAROLIEiJ_G0026570)	MGP_CAROLIEiJ_G0026569 #16	Atpif1 (MGP_CAROLIEiJ_G0026568) #17	Sesn2 (MGP_CAROLIEiJ_G0026567) #18	Med18 (MGP_CAROLIEiJ_G0026566) #19	Phactr4 (MGP_CAROLIEiJ_G0026565) #21	Rcc1 (MGP_CAROLIEiJ_G0026564) #22	Trnau1ap (MGP_CAROLIEiJ_G0026563) #23	Gmeb1 (MGP_CAROLIEiJ_G0026561) #26	Oprd1 (MGP_CAROLIEiJ_G0026559)	MGP_CAROLIEiJ_G0026558	Epb41 (MGP_CAROLIEiJ_G0026557)	Tmem200b (MGP_CAROLIEiJ_G0026556)	Srsf4 (MGP_CAROLIEiJ_G0026555)	Mecr (MGP_CAROLIEiJ_G0026554)	Ptpru (MGP_CAROLIEiJ_G0026553)	Matn1 (MGP_CAROLIEiJ_G0026552)	Laptm5 (MGP_CAROLIEiJ_G0026551)	Sdc3 (MGP_CAROLIEiJ_G0026550)	Pum1 (MGP_CAROLIEiJ_G0026549)	Nkain1 (MGP_CAROLIEiJ_G0026548)	Snrnp40 (MGP_CAROLIEiJ_G0026547)
Shrew mouse	MODERN SPECIES	19	Fgr (MGP_PahariEiJ_G0028912)	Fam76a (MGP_PahariEiJ_G0028911)	MGP_PahariEiJ_G0028910 #7	Ppp1r8 (MGP_PahariEiJ_G0028909) #8	Themis2 (MGP_PahariEiJ_G0028908) #9	Rpa2 (MGP_PahariEiJ_G0028907) #10	Smpdl3b (MGP_PahariEiJ_G0028906) #11	Xkr8 (MGP_PahariEiJ_G0028905) #12	Eya3 (MGP_PahariEiJ_G0028904) #13	Ptafr (MGP_PahariEiJ_G0028903)	MGP_PahariEiJ_G0028902 #16	Atpif1 (MGP_PahariEiJ_G0028901) #17	Sesn2 (MGP_PahariEiJ_G0028900) #18	Med18 (MGP_PahariEiJ_G0028899) #19	Phactr4 (MGP_PahariEiJ_G0028898) #21	Rcc1 (MGP_PahariEiJ_G0028897) #22	Trnau1ap (MGP_PahariEiJ_G0028896) #23	Rab42 (MGP_PahariEiJ_G0028895) #24	Taf12 (MGP_PahariEiJ_G0028894) #25	Gmeb1 (MGP_PahariEiJ_G0028893) #26	Ythdf2 (MGP_PahariEiJ_G0028892)	Oprd1 (MGP_PahariEiJ_G0028891)	MGP_PahariEiJ_G0028890	Epb41 (MGP_PahariEiJ_G0028889)	Tmem200b (MGP_PahariEiJ_G0028888)	Srsf4 (MGP_PahariEiJ_G0028887)	Mecr (MGP_PahariEiJ_G0028886)	Ptpru (MGP_PahariEiJ_G0028885)	Matn1 (MGP_PahariEiJ_G0028884)	Laptm5 (MGP_PahariEiJ_G0028883)	Sdc3 (MGP_PahariEiJ_G0028882)
Rat	MODERN SPECIES	15	Fam76a (ENSRNOG00000011254)	Stx12 (ENSRNOG00000011804) #7	Ppp1r8 (ENSRNOG00000059550) #8	Themis2 (ENSRNOG00000012965) #9	Rpa2 (ENSRNOG00000013005) #10	Smpdl3b (ENSRNOG00000042326) #11	Xkr8 (ENSRNOG00000024312) #12	Eya3 (ENSRNOG00000010396) #13	Ptafr (ENSRNOG00000013231)	Dnajc8 (ENSRNOG00000013255) #16	Atp5if1 (ENSRNOG00000013300) #17	Sesn2 (ENSRNOG00000042785) #18	Med18 (ENSRNOG00000067073) #19	LOC120102993 (ENSRNOG00000031506)	Phactr4 (ENSRNOG00000046922) #21	Rcc1 (ENSRNOG00000050106) #22	Trnau1ap (ENSRNOG00000055344) #23	Rab42 (ENSRNOG00000063150) #24	Taf12 (ENSRNOG00000048288) #25	Gmeb1 (ENSRNOG00000010910) #26	Ythdf2 (ENSRNOG00000010892)	Oprd1 (ENSRNOG00000010531)	Epb41 (ENSRNOG00000010037)	Tmem200b (ENSRNOG00000065288)	Srsf4 (ENSRNOG00000010007)	Mecr (ENSRNOG00000028047)	Ptpru (ENSRNOG00000013515)	Matn1 (ENSRNOG00000010932)	Laptm5 (ENSRNOG00000011054)	Sdc3 (ENSRNOG00000011927)	Pum1 (ENSRNOG00000011709)
Upper Galilee mountains blind mole rat	MODERN SPECIES	1411						Rpa2 (ENSNGAG00000004922) #10	Smpdl3b (ENSNGAG00000018059) #11	Xkr8 (ENSNGAG00000000492) #12	Eya3 (ENSNGAG00000018153) #13	Ptafr (ENSNGAG00000012034)	Dnajc8 (ENSNGAG00000011117) #16	Atpif1 (ENSNGAG00000020924) #17	Sesn2 (ENSNGAG00000019093) #18	ENSNGAG00000020389 #19	Phactr4 (ENSNGAG00000004944) #21	Rcc1 (ENSNGAG00000000590) #22	Trnau1ap (ENSNGAG00000015881) #23	Rab42 (ENSNGAG00000015676) #24	ENSNGAG00000015280 #25	Gmeb1 (ENSNGAG00000015007) #26	Ythdf2 (ENSNGAG00000014432)	Oprd1 (ENSNGAG00000013802)	Epb41 (ENSNGAG00000013126)	Tmem200b (ENSNGAG00000012572)	Srsf4 (ENSNGAG00000012225)	Mecr (ENSNGAG00000011918)	Ptpru (ENSNGAG00000011573)
Lesser Egyptian jerboa	MODERN SPECIES	201	ENSJJAG00000002452	Stx12 (ENSJJAG00000004079) #7	ENSJJAG00000010784 #8	Themis2 (ENSJJAG00000012926) #9	ENSJJAG00000014579 #10	Smpdl3b (ENSJJAG00000015036) #11	Xkr8 (ENSJJAG00000015552) #12	Eya3 (ENSJJAG00000017580) #13	Ptafr (ENSJJAG00000012719)	ENSJJAG00000009301	Atpif1 (ENSJJAG00000010517) #17	Sesn2 (ENSJJAG00000011184) #18	Phactr4 (ENSJJAG00000015640) #21	ENSJJAG00000022388	ENSJJAG00000012669	Rcc1 (ENSJJAG00000002119) #22	Trnau1ap (ENSJJAG00000010128) #23	Rab42 (ENSJJAG00000021507) #24	ENSJJAG00000022021 #25	Gmeb1 (ENSJJAG00000000647) #26	Ythdf2 (ENSJJAG00000013745)	ENSJJAG00000012769	Oprd1 (ENSJJAG00000015113)	Epb41 (ENSJJAG00000015995)	Tmem200b (ENSJJAG00000020828)	Srsf4 (ENSJJAG00000022153)	Mecr (ENSJJAG00000002955)	Ptpru (ENSJJAG00000012562)	ENSJJAG00000010350
Kangaroo rat	MODERN SPECIES	325	Fgr (ENSDORG00000015238)	Fam76a (ENSDORG00000000575)	Stx12 (ENSDORG00000001059) #7	ENSDORG00000025172 #8	Themis2 (ENSDORG00000003740) #9	Rpa2 (ENSDORG00000003741) #10	Smpdl3b (ENSDORG00000015612) #11	Xkr8 (ENSDORG00000023428) #12	Eya3 (ENSDORG00000015614) #13	Ptafr (ENSDORG00000027100)	Dnajc8 (ENSDORG00000004488) #16	Atpif1 (ENSDORG00000004489) #17	Sesn2 (ENSDORG00000004491) #18	Med18 (ENSDORG00000003626) #19	Phactr4 (ENSDORG00000003281) #21	Rcc1 (ENSDORG00000008750) #22	Rab42 (ENSDORG00000023607) #24	Trnau1ap (ENSDORG00000006349) #23	Taf12 (ENSDORG00000015036) #25	Gmeb1 (ENSDORG00000027761) #26	Ythdf2 (ENSDORG00000016564)	Oprd1 (ENSDORG00000015419)	ENSDORG00000028662	Srsf4 (ENSDORG00000002459)	Mecr (ENSDORG00000002462)	Ptpru (ENSDORG00000002463)	Matn1 (ENSDORG00000009341)	Sdc3 (ENSDORG00000013924)	Pum1 (ENSDORG00000001875)	Nkain1 (ENSDORG00000000481)	Lrrc38 (ENSDORG00000030076)
Rodentia_A	ANCESTRAL SPECIES		ENSGT00940000157554	ENSGT00940000160073	ENSGT01000000214440.A.a.b.a #7	ENSGT00940000156115 #8	ENSGT00530000063770.c.a #9	ENSGT00390000010045 #10	ENSGT00950000183182.a.a #11	ENSGT01090000260093.b #12	ENSGT00950000182978.B #13	ENSGT01060000248589.D	ENSGT00390000012569.a #16	ENSGT00390000006264 #17	ENSGT00950000183168.B.a #18	ENSGT00390000003312 #19	ENSGT00940000157582 #21	ENSGT00940000155543 #22	ENSGT00940000156139 #23	ENSGT00940000162094 #24	ENSGT00390000002144 #25	ENSGT00410000025596.a.b #26	ENSGT00940000156761.j	ENSGT00940000157669	ENSGT00940000157833	ENSGT00530000063698.b	ENSGT00940000156213	ENSGT00940000156592	ENSGT00940000157151	ENSGT00940000159638	ENSGT00940000153446.a.b	ENSGT00940000160209	ENSGT00940000158079
Sciuridae	ANCESTRAL SPECIES	3	ENSGT00940000157554	ENSGT00940000160073	ENSGT01000000214440.A.a.b.a #7	ENSGT00940000156115 #8	ENSGT00530000063770.c.a #9	ENSGT00390000010045 #10	ENSGT00950000183182.a.a #11	ENSGT01090000260093.b #12	ENSGT00950000182978.B #13	ENSGT01060000248589.D	ENSGT00390000012569.a #16	ENSGT00390000006264 #17	ENSGT00950000183168.B.a #18	ENSGT00390000003312 #19	ENSGT00940000157582 #21	ENSGT00940000155543 #22	ENSGT00940000156139 #23	ENSGT00940000162094 #24	ENSGT00390000002144 #25	ENSGT00410000025596.a.b #26	ENSGT00940000156761.j	ENSGT00940000157669	ENSGT00940000157833	ENSGT00530000063698.b	ENSGT00940000156213	ENSGT00940000156592	ENSGT00940000157151	ENSGT00940000159638	ENSGT00940000153446.a.b	ENSGT00940000160209	ENSGT00940000158079
Marmotini	ANCESTRAL SPECIES		ENSGT00940000160073	ENSGT01000000214440.A.a.b.a #7	ENSGT00960000190607	ENSGT00940000156115 #8	ENSGT00530000063770.c.a #9	ENSGT00390000010045 #10	ENSGT00950000183182.a.a #11	ENSGT01090000260093.b #12	ENSGT00950000182978.B #13	ENSGT01060000248589.D	ENSGT00390000012569.a #16	ENSGT00390000006264 #17	ENSGT00950000183168.B.a #18	ENSGT00390000003312 #19	ENSGT00940000157582 #21	ENSGT00940000155543 #22	ENSGT00940000156139 #23	ENSGT00940000162094 #24	ENSGT00390000002144 #25	ENSGT00410000025596.a.b #26	ENSGT00940000156761.j	ENSGT00940000157669	ENSGT00940000157833	ENSGT00530000063698.b	ENSGT00940000156213	ENSGT00940000156592	ENSGT00940000157151	ENSGT00940000159638	ENSGT00940000153446.a.b	ENSGT00940000160209	ENSGT00940000158079
Marmotini_b	ANCESTRAL SPECIES		ENSGT00940000160073	ENSGT01000000214440.A.a.b.a #7	ENSGT00960000190607	ENSGT00940000156115 #8	ENSGT00530000063770.c.a #9	ENSGT00390000010045 #10	ENSGT00950000183182.a.a #11	ENSGT01090000260093.b #12	ENSGT00950000182978.B #13	ENSGT01060000248589.D	ENSGT00390000012569.a #16	ENSGT00390000006264 #17	ENSGT00950000183168.B.a #18	ENSGT00390000003312 #19	ENSGT00940000157582 #21	ENSGT00940000155543 #22	ENSGT00940000156139 #23	ENSGT00940000162094 #24	ENSGT00390000002144 #25	ENSGT00410000025596.a.b #26	ENSGT00940000156761.j	ENSGT00940000157669	ENSGT00940000157833	ENSGT00530000063698.b	ENSGT00940000156213	ENSGT00940000156592	ENSGT00940000157151	ENSGT00940000159638	ENSGT00940000153446.a.b	ENSGT00940000160209	ENSGT00940000158079
Arctic ground squirrel	MODERN SPECIES	92	FAM76A (ENSUPAG00010021053)	STX12 (ENSUPAG00010021044) #7	ENSUPAG00010021039	PPP1R8 (ENSUPAG00010021025) #8	THEMIS2 (ENSUPAG00010021016) #9	SMPDL3B (ENSUPAG00010021005) #11	XKR8 (ENSUPAG00010020998) #12	EYA3 (ENSUPAG00010020872) #13	PTAFR (ENSUPAG00010020865)	ENSUPAG00010020856	ATP5IF1 (ENSUPAG00010020850) #17	SESN2 (ENSUPAG00010020839) #18	ENSUPAG00010020838	MED18 (ENSUPAG00010020827) #19	PHACTR4 (ENSUPAG00010020803) #21	RCC1 (ENSUPAG00010020770) #22	TRNAU1AP (ENSUPAG00010020750) #23	RAB42 (ENSUPAG00010020728) #24	ENSUPAG00010020706 #25	GMEB1 (ENSUPAG00010020697) #26	YTHDF2 (ENSUPAG00010020684)	OPRD1 (ENSUPAG00010020681)	EPB41 (ENSUPAG00010019935)	TMEM200B (ENSUPAG00010019926)	SRSF4 (ENSUPAG00010019922)	MECR (ENSUPAG00010019905)	PTPRU (ENSUPAG00010019842)	MATN1 (ENSUPAG00010019827)	LAPTM5 (ENSUPAG00010019820)	SDC3 (ENSUPAG00010019810)	PUM1 (ENSUPAG00010019620)
Squirrel	MODERN SPECIES	74	FGR (ENSSTOG00000026717)	FAM76A (ENSSTOG00000004331)	STX12 (ENSSTOG00000019943) #7	PPP1R8 (ENSSTOG00000004381) #8	THEMIS2 (ENSSTOG00000034218) #9	RPA2 (ENSSTOG00000004433) #10	SMPDL3B (ENSSTOG00000004468) #11	XKR8 (ENSSTOG00000023254) #12	EYA3 (ENSSTOG00000004478) #13	PTAFR (ENSSTOG00000015934)	DNAJC8 (ENSSTOG00000012834) #16	ATP5IF1 (ENSSTOG00000020766) #17	SESN2 (ENSSTOG00000009293) #18	MED18 (ENSSTOG00000020723) #19	PHACTR4 (ENSSTOG00000006463) #21	RCC1 (ENSSTOG00000012131) #22	TRNAU1AP (ENSSTOG00000000079) #23	RAB42 (ENSSTOG00000000084) #24	TAF12 (ENSSTOG00000000086) #25	GMEB1 (ENSSTOG00000000088) #26	YTHDF2 (ENSSTOG00000025075)	OPRD1 (ENSSTOG00000011943)	EPB41 (ENSSTOG00000032103)	TMEM200B (ENSSTOG00000034064)	SRSF4 (ENSSTOG00000015908)	MECR (ENSSTOG00000026575)	PTPRU (ENSSTOG00000015915)	MATN1 (ENSSTOG00000014709)	LAPTM5 (ENSSTOG00000021660)	SDC3 (ENSSTOG00000027125)	PUM1 (ENSSTOG00000010757)
Alpin marmot	MODERN SPECIES	15	FAM76A (ENSMMMG00000013430)	STX12 (ENSMMMG00000013420) #7	ENSMMMG00000013416	PPP1R8 (ENSMMMG00000013396) #8	THEMIS2 (ENSMMMG00000013395) #9	RPA2 (ENSMMMG00000013382) #10	SMPDL3B (ENSMMMG00000013366) #11	XKR8 (ENSMMMG00000013348) #12	EYA3 (ENSMMMG00000013195) #13	PTAFR (ENSMMMG00000013184)	DNAJC8 (ENSMMMG00000013133) #16	ATP5IF1 (ENSMMMG00000013117) #17	SESN2 (ENSMMMG00000013099) #18	MED18 (ENSMMMG00000013084) #19	PHACTR4 (ENSMMMG00000013031) #21	RCC1 (ENSMMMG00000012973) #22	TRNAU1AP (ENSMMMG00000012958) #23	RAB42 (ENSMMMG00000012933) #24	TAF12 (ENSMMMG00000012915) #25	GMEB1 (ENSMMMG00000012888) #26	YTHDF2 (ENSMMMG00000012863)	OPRD1 (ENSMMMG00000012823)	EPB41 (ENSMMMG00000011984)	TMEM200B (ENSMMMG00000011965)	SRSF4 (ENSMMMG00000011951)	MECR (ENSMMMG00000011938)	PTPRU (ENSMMMG00000011811)	LAPTM5 (ENSMMMG00000011800)	SDC3 (ENSMMMG00000011746)	PUM1 (ENSMMMG00000011433)	NKAIN1 (ENSMMMG00000011409)
Eurasian red squirrel	MODERN SPECIES		STX12 (ENSSVLG00005010643) #7	PPP1R8 (ENSSVLG00005010667) #8	THEMIS2 (ENSSVLG00005010773) #9	RPA2 (ENSSVLG00005010920) #10	SMPDL3B (ENSSVLG00005011082) #11	XKR8 (ENSSVLG00005011375) #12	ENSSVLG00005011412	EYA3 (ENSSVLG00005011513) #13	PTAFR (ENSSVLG00005011699)	DNAJC8 (ENSSVLG00005011722) #16	ATP5IF1 (ENSSVLG00005011758) #17	SESN2 (ENSSVLG00005011840) #18	MED18 (ENSSVLG00005011896) #19	ENSSVLG00005011930	PHACTR4 (ENSSVLG00005011991) #21	RCC1 (ENSSVLG00005012359) #22	TRNAU1AP (ENSSVLG00005012466) #23	RAB42 (ENSSVLG00005012595) #24	ENSSVLG00005012624 #25	GMEB1 (ENSSVLG00005012698) #26	YTHDF2 (ENSSVLG00005012853)	ENSSVLG00005012949	OPRD1 (ENSSVLG00005012967)	EPB41 (ENSSVLG00005014395)	TMEM200B (ENSSVLG00005016580)	SRSF4 (ENSSVLG00005016599)	MECR (ENSSVLG00005016630)	PTPRU (ENSSVLG00005016704)	MATN1 (ENSSVLG00005016798)	LAPTM5 (ENSSVLG00005016884)	SDC3 (ENSSVLG00005016980)
Hystricomorpha	ANCESTRAL SPECIES	4	ENSGT00940000157554	ENSGT00940000160073	ENSGT01000000214440.A.a.b.a #7	ENSGT00940000156115 #8	ENSGT00530000063770.c.a #9	ENSGT00390000010045 #10	ENSGT00950000183182.a.a #11	ENSGT01090000260093.b #12	ENSGT00950000182978.B #13	ENSGT01060000248589.D	ENSGT00390000012569.a #16	ENSGT00390000006264 #17	ENSGT00950000183168.B.a #18	ENSGT00390000003312 #19	ENSGT00940000157582 #21	ENSGT00940000155543 #22	ENSGT00940000156139 #23	ENSGT00940000162094 #24	ENSGT00390000002144 #25	ENSGT00410000025596.a.b #26	ENSGT00940000156761.j	ENSGT00940000157669	ENSGT00940000157833	ENSGT00530000063698.b	ENSGT00940000156213	ENSGT00940000156592	ENSGT00940000157151	ENSGT00940000159638	ENSGT00940000153446.a.b	ENSGT00940000160209	ENSGT00940000158079
Hystricomorpha_a	ANCESTRAL SPECIES	1	ENSGT00940000157554	ENSGT00940000160073	ENSGT01000000214440.A.a.b.a #7	ENSGT00940000156115 #8	ENSGT00530000063770.c.a #9	ENSGT00390000010045 #10	ENSGT00950000183182.a.a #11	ENSGT01090000260093.b #12	ENSGT00950000182978.B #13	ENSGT01060000248589.D	ENSGT00390000012569.a #16	ENSGT00390000006264 #17	ENSGT00950000183168.B.a #18	ENSGT00390000003312 #19	ENSGT00940000157582 #21	ENSGT00940000155543 #22	ENSGT00940000156139 #23	ENSGT00940000162094 #24	ENSGT00390000002144 #25	ENSGT00410000025596.a.b #26	ENSGT00940000156761.j	ENSGT00940000157669	ENSGT00940000157833	ENSGT00530000063698.b	ENSGT00940000156213	ENSGT00940000156592	ENSGT00940000157151	ENSGT00940000159638	ENSGT00940000153446.a.b	ENSGT00940000160209	ENSGT00940000158079
Hystricomorpha_b	ANCESTRAL SPECIES	7	ENSGT00940000157554	ENSGT00940000160073	ENSGT01000000214440.A.a.b.a #7	ENSGT00940000156115 #8	ENSGT00530000063770.c.a #9	ENSGT00390000010045 #10	ENSGT00950000183182.a.a #11	ENSGT01090000260093.b #12	ENSGT00950000182978.B #13	ENSGT01060000248589.D	ENSGT00390000012569.a #16	ENSGT00390000006264 #17	ENSGT00950000183168.B.a #18	ENSGT00390000003312 #19	ENSGT00940000157582 #21	ENSGT00940000155543 #22	ENSGT00940000156139 #23	ENSGT00940000162094 #24	ENSGT00390000002144 #25	ENSGT00410000025596.a.b #26	ENSGT00940000156761.j	ENSGT00940000157669	ENSGT00940000157833	ENSGT00530000063698.b	ENSGT00940000156213	ENSGT00940000156592	ENSGT00940000157151	ENSGT00940000159638	ENSGT00940000153446.a.b	ENSGT00940000160209	ENSGT00940000158079
Long-tailed chinchilla	MODERN SPECIES	159	FGR (ENSCLAG00000014147)	FAM76A (ENSCLAG00000008844)	STX12 (ENSCLAG00000013795) #7	PPP1R8 (ENSCLAG00000011211) #8	THEMIS2 (ENSCLAG00000012140) #9	RPA2 (ENSCLAG00000010772) #10	SMPDL3B (ENSCLAG00000011768) #11	XKR8 (ENSCLAG00000011287) #12	EYA3 (ENSCLAG00000008901) #13	PTAFR (ENSCLAG00000017842)	DNAJC8 (ENSCLAG00000007390) #16	ATP5IF1 (ENSCLAG00000014624) #17	SESN2 (ENSCLAG00000011979) #18	MED18 (ENSCLAG00000015343) #19	PHACTR4 (ENSCLAG00000016145) #21	RCC1 (ENSCLAG00000008107) #22	TRNAU1AP (ENSCLAG00000008223) #23	RAB42 (ENSCLAG00000010175) #24	TAF12 (ENSCLAG00000007187) #25	GMEB1 (ENSCLAG00000006804) #26	YTHDF2 (ENSCLAG00000007438)	OPRD1 (ENSCLAG00000010788)	EPB41 (ENSCLAG00000008568)	SRSF4 (ENSCLAG00000009008)	ENSCLAG00000017721	MECR (ENSCLAG00000010792)	PTPRU (ENSCLAG00000014778)	MATN1 (ENSCLAG00000008049)	LAPTM5 (ENSCLAG00000009573)	SDC3 (ENSCLAG00000010987)	PUM1 (ENSCLAG00000007662)
Degu	MODERN SPECIES	204	PPP1R8 (ENSODEG00000004352) #8	ENSODEG00000004373	THEMIS2 (ENSODEG00000004403) #9	ENSODEG00000004443 #10	ENSODEG00000003467 #11	XKR8 (ENSODEG00000003481) #12	EYA3 (ENSODEG00000003507) #13	PTAFR (ENSODEG00000018990)	ENSODEG00000003721 #16	ATP5IF1 (ENSODEG00000003747) #17	SESN2 (ENSODEG00000003769) #18	MED18 (ENSODEG00000003791) #19	ENSODEG00000003828	ENSODEG00000018954	PHACTR4 (ENSODEG00000003857) #21	RCC1 (ENSODEG00000003970) #22	TRNAU1AP (ENSODEG00000002970) #23	RAB42 (ENSODEG00000003021) #24	ENSODEG00000003043 #25	GMEB1 (ENSODEG00000003092) #26	ENSODEG00000003103	OPRD1 (ENSODEG00000003121)	ENSODEG00000018881	ENSODEG00000018892	ENSODEG00000003178	ENSODEG00000003196	TMEM200B (ENSODEG00000003209)	SRSF4 (ENSODEG00000003230)	MECR (ENSODEG00000003260)	PTPRU (ENSODEG00000003405)	MATN1 (ENSODEG00000003275)
Guinea pig	MODERN SPECIES	25	ENSCPOG00000031828	FAM76A (ENSCPOG00000006186)	STX12 (ENSCPOG00000013160) #7	PPP1R8 (ENSCPOG00000036078) #8	THEMIS2 (ENSCPOG00000033796) #9	RPA2 (ENSCPOG00000008766) #10	SMPDL3B (ENSCPOG00000008773) #11	ENSCPOG00000033302	EYA3 (ENSCPOG00000012512) #13	PTAFR (ENSCPOG00000031748)	DNAJC8 (ENSCPOG00000014652) #16	ATP5IF1 (ENSCPOG00000030836) #17	SESN2 (ENSCPOG00000000236) #18	MED18 (ENSCPOG00000038084) #19	PHACTR4 (ENSCPOG00000003219) #21	RCC1 (ENSCPOG00000010069) #22	TRNAU1AP (ENSCPOG00000001925) #23	RAB42 (ENSCPOG00000037627) #24	TAF12 (ENSCPOG00000009044) #25	GMEB1 (ENSCPOG00000032204) #26	YTHDF2 (ENSCPOG00000019907)	OPRD1 (ENSCPOG00000039511)	EPB41 (ENSCPOG00000007254)	TMEM200B (ENSCPOG00000020258)	SRSF4 (ENSCPOG00000036234)	MECR (ENSCPOG00000037475)	PTPRU (ENSCPOG00000000424)	ENSCPOG00000001380	MATN1 (ENSCPOG00000010146)	LAPTM5 (ENSCPOG00000007128)	SDC3 (ENSCPOG00000022452)
Naked mole-rat female	MODERN SPECIES	26	FAM76A (ENSHGLG00000009747)	ENSHGLG00000014326 #8	THEMIS2 (ENSHGLG00000019146) #9	RPA2 (ENSHGLG00000018528) #10	SMPDL3B (ENSHGLG00000012112) #11	XKR8 (ENSHGLG00000012712) #12	ENSHGLG00000046470	EYA3 (ENSHGLG00000018515) #13	ENSHGLG00000032519	PTAFR (ENSHGLG00000048424)	DNAJC8 (ENSHGLG00000011449) #16	ENSHGLG00000050011 #17	SESN2 (ENSHGLG00000011617) #18	MED18 (ENSHGLG00000049561) #19	PHACTR4 (ENSHGLG00000012380) #21	RCC1 (ENSHGLG00000010563) #22	ENSHGLG00000010380 #23	ENSHGLG00000032594 #23	RAB42 (ENSHGLG00000010181) #24	ENSHGLG00000049224 #25	GMEB1 (ENSHGLG00000012929) #26	ENSHGLG00000009933	OPRD1 (ENSHGLG00000011866)	EPB41 (ENSHGLG00000012118)	TMEM200B (ENSHGLG00000049796)	SRSF4 (ENSHGLG00000011842)	MECR (ENSHGLG00000012855)	ENSHGLG00000014761	ENSHGLG00000045877	ENSHGLG00000034685	ENSHGLG00000040884
Lagomorpha	ANCESTRAL SPECIES	21	ENSGT00950000182962.b.a	ENSGT00390000018883	ENSGT00940000157554	ENSGT00940000160073	ENSGT00940000156115 #8	ENSGT00530000063770.c.a #9	ENSGT00390000010045 #10	ENSGT00950000183182.a.a #11	ENSGT01090000260093.b #12	ENSGT00950000182978.B #13	ENSGT01060000248589.D	ENSGT00940000164617	ENSGT00390000006264 #17	ENSGT00950000183168.B.a #18	ENSGT00940000157582 #21	ENSGT00940000155543 #22	ENSGT00940000156139 #23	ENSGT00940000162094 #24	ENSGT00390000002144 #25	ENSGT00410000025596.a.b #26	ENSGT00940000156761	ENSGT00940000157669	ENSGT00940000157833	ENSGT00530000063698.b	ENSGT00940000156213	ENSGT00940000156592	ENSGT00940000157151	ENSGT00940000159638	ENSGT00940000153446.a.b	ENSGT00940000160209	ENSGT00940000158079
Rabbit	DUPLICATION
Rabbit	MODERN SPECIES	4	SYTL1 (ENSOCUG00000002371)	MAP3K6 (ENSOCUG00000002379)	ENSOCUG00000007587	GPR3 (ENSOCUG00000027272)	WASF2 (ENSOCUG00000002394)	AHDC1 (ENSOCUG00000008914)	FGR (ENSOCUG00000008922)	FAM76A (ENSOCUG00000014830)	PPP1R8 (ENSOCUG00000013594) #8	SMPDL3B (ENSOCUG00000012589) #11	EYA3 (ENSOCUG00000008020) #13	PTAFR (ENSOCUG00000017831)	ENSOCUG00000017932 #17	SESN2 (ENSOCUG00000014896) #18	PHACTR4 (ENSOCUG00000027528) #21	ENSOCUG00000002346 #22	ENSOCUG00000002353	RAB42 (ENSOCUG00000003933) #24	TAF12 (ENSOCUG00000003935) #25	GMEB1 (ENSOCUG00000010893) #26	YTHDF2 (ENSOCUG00000010612)	OPRD1 (ENSOCUG00000001033)	ENSOCUG00000030120	EPB41 (ENSOCUG00000006641)	TMEM200B (ENSOCUG00000025757)	SRSF4 (ENSOCUG00000001837)	MECR (ENSOCUG00000012645)	PTPRU (ENSOCUG00000012661)	MATN1 (ENSOCUG00000008153)	SDC3 (ENSOCUG00000006838)	PUM1 (ENSOCUG00000008641)
Rabbit	MODERN SPECIES	19	ENSOCUG00000039664	ENSOCUG00000014903	ENSOCUG00000021190	ENSOCUG00000032894	NAA16 (ENSOCUG00000013024)	MTRF1 (ENSOCUG00000025207)	ENSOCUG00000014016	WBP4 (ENSOCUG00000004256)	ELF1 (ENSOCUG00000010580)	ENSOCUG00000036807	CNMD (ENSOCUG00000005852)	PCDH8 (ENSOCUG00000008197)	ENSOCUG00000034427	ENSOCUG00000006349	ENSOCUG00000026932	ENSOCUG00000023238 #22	ENSOCUG00000024464	PCDH17 (ENSOCUG00000005237)	ENSOCUG00000037923	DIAPH3 (ENSOCUG00000001719)	TDRD3 (ENSOCUG00000014261)	ENSOCUG00000030963	PCDH20 (ENSOCUG00000016877)	ENSOCUG00000022627	PCDH9 (ENSOCUG00000000774)	ENSOCUG00000024260	ENSOCUG00000030652	KLHL1 (ENSOCUG00000015164)	DACH1 (ENSOCUG00000002140)	MZT1 (ENSOCUG00000006654)	BORA (ENSOCUG00000006658)
Pika	MODERN SPECIES	639																RCC1 (ENSOPRG00000007072) #22	ENSOPRG00000007084 #23	ENSOPRG00000007095
Tree shrew	MODERN SPECIES	4275																ENSTBEG00000006787 #22