Sarcopterygii	ANCESTRAL SPECIES	55	ENSGT00390000016565	ENSGT00950000182900.B	ENSGT00390000007371	ENSGT00940000154868.a.b	ENSGT00940000160932	ENSGT00940000156338	ENSGT01060000248564.b.a.a.a	ENSGT00950000182962.b.a	ENSGT00390000018883	ENSGT00940000157554 #7	ENSGT00940000163923	ENSGT00940000160073 #8	ENSGT00950000183168.B.a #19	ENSGT00390000003312 #20	ENSGT00940000157582 #21	ENSGT00940000155543 #22	ENSGT00940000157669 #28	ENSGT00940000155393.d	ENSGT00940000157034	ENSGT00940000165326	ENSGT00940000160992	ENSGT00940000160504	ENSGT00940000167209	ENSGT00940000156761 #27	ENSGT00410000025596.a.b #26	ENSGT00390000002144 #25	ENSGT00940000164873	ENSGT00940000159933	ENSGT00390000015655.a	ENSGT00940000158415	ENSGT00940000159782
Tetrapoda	ANCESTRAL SPECIES	38	ENSGT00950000182900.B	ENSGT00390000007371	ENSGT00940000154868.a.b	ENSGT00940000160932	ENSGT00940000159398	ENSGT00940000157531	ENSGT01060000248564.b.a.a.a	ENSGT00950000182962.b.a	ENSGT00390000018883	ENSGT00940000157554 #7	ENSGT00940000163923	ENSGT00940000160073 #8	ENSGT00950000183168.B.a #19	ENSGT00390000003312 #20	ENSGT00940000157582 #21	ENSGT00940000155543 #22	ENSGT00940000157669 #28	ENSGT00940000155393.d	ENSGT00940000157034	ENSGT00940000165326	ENSGT00940000160992	ENSGT00940000160504	ENSGT00940000167209	ENSGT00940000156761 #27	ENSGT00410000025596.a.b #26	ENSGT00390000002144 #25	ENSGT00940000164873	ENSGT00940000156139 #24	ENSGT00940000155019.a.a	ENSGT00960000189438	ENSGT00940000157833 #29
Amniota	ANCESTRAL SPECIES	47													ENSGT00950000183168.B.a #19	ENSGT00390000003312 #20	ENSGT00940000157582 #21	ENSGT00940000155543 #22	ENSGT00940000157669 #28	ENSGT00940000157034	ENSGT00940000161085	ENSGT00940000160992	ENSGT00940000160504	ENSGT00940000167209	ENSGT00940000156761 #27	ENSGT01100000263839	ENSGT00410000025596.a.b #26	ENSGT00390000002144 #25	ENSGT00940000164873	ENSGT00940000162094 #23	ENSGT00940000156139 #24	ENSGT00940000155019.a.a	ENSGT00960000189438
Mammalia	ANCESTRAL SPECIES	19	ENSGT00940000163923	ENSGT00940000160073 #8	ENSGT01000000214440.A.a.b.a #9	ENSGT00940000156115 #10	ENSGT00530000063770.c.a #11	ENSGT00390000010045 #12	ENSGT00950000183182.a.a #13	ENSGT01090000260093.b #14	ENSGT00950000182978.B #15	ENSGT01060000248589.D #16	ENSGT00390000012569.a #17	ENSGT00390000006264 #18	ENSGT00950000183168.B.a #19	ENSGT00390000003312 #20	ENSGT00940000157582 #21	ENSGT00940000155543 #22	ENSGT00940000156139 #24	ENSGT00940000162094 #23	ENSGT00940000164873	ENSGT00390000002144 #25	ENSGT00410000025596.a.b #26	ENSGT01100000263839	ENSGT00940000156761 #27	ENSGT00940000160504	ENSGT00940000160992	ENSGT00940000161085	ENSGT00940000157034	ENSGT00940000153587.b	ENSGT00940000153511.a	ENSGT01010000222287.B.b.a.b.a	ENSGT00950000182852.A.b
Theria	ANCESTRAL SPECIES	16	ENSGT00940000157554 #7	ENSGT00940000160073 #8	ENSGT01000000214440.A.a.b.a #9	ENSGT00940000156115 #10	ENSGT00530000063770.c.a #11	ENSGT00390000010045 #12	ENSGT00950000183182.a.a #13	ENSGT01090000260093.b #14	ENSGT00950000182978.B #15	ENSGT01060000248589.D #16	ENSGT00390000012569.a #17	ENSGT00390000006264 #18	ENSGT00950000183168.B.a #19	ENSGT00390000003312 #20	ENSGT00940000157582 #21	ENSGT00940000155543 #22	ENSGT00940000156139 #24	ENSGT00940000162094 #23	ENSGT00940000164873	ENSGT00390000002144 #25	ENSGT00410000025596.a.b #26	ENSGT01100000263839	ENSGT00940000156761 #27	ENSGT00940000157669 #28	ENSGT00940000157833 #29	ENSGT00530000063698.b	ENSGT00940000156213 #30	ENSGT00940000156592 #31	ENSGT00940000157151 #32	ENSGT00940000159638 #33	ENSGT00940000153446.a.b
Eutheria	ANCESTRAL SPECIES		ENSGT00940000163178	ENSGT00940000160073 #8	ENSGT01000000214440.A.a.b.a #9	ENSGT00940000156115 #10	ENSGT00530000063770.c.a #11	ENSGT00390000010045 #12	ENSGT00950000183182.a.a #13	ENSGT01090000260093.b #14	ENSGT00950000182978.B #15	ENSGT01060000248589.D #16	ENSGT00390000012569.a #17	ENSGT00390000006264 #18	ENSGT00950000183168.B.a #19	ENSGT00390000003312 #20	ENSGT00940000157582 #21	ENSGT00940000155543 #22	ENSGT00940000156139 #24	ENSGT00940000162094 #23	ENSGT00940000164873	ENSGT00390000002144 #25	ENSGT00410000025596.a.b #26	ENSGT01100000263839	ENSGT00940000156761 #27	ENSGT00940000157669 #28	ENSGT00940000157833 #29	ENSGT00530000063698.b	ENSGT00940000156213 #30	ENSGT00940000156592 #31	ENSGT00940000157151 #32	ENSGT00940000159638 #33	ENSGT00940000153446.a.b
Boreoeutheria	ANCESTRAL SPECIES		ENSGT00940000163178	ENSGT00940000160073 #8	ENSGT01000000214440.A.a.b.a #9	ENSGT00940000156115 #10	ENSGT00530000063770.c.a #11	ENSGT00390000010045 #12	ENSGT00950000183182.a.a #13	ENSGT01090000260093.b #14	ENSGT00950000182978.B #15	ENSGT01060000248589.D #16	ENSGT00390000012569.a #17	ENSGT00390000006264 #18	ENSGT00950000183168.B.a #19	ENSGT00390000003312 #20	ENSGT00940000157582 #21	ENSGT00940000155543 #22	ENSGT00940000156139 #24	ENSGT00940000162094 #23	ENSGT00940000164873	ENSGT00390000002144 #25	ENSGT00410000025596.a.b #26	ENSGT01100000263839	ENSGT00940000156761 #27	ENSGT00940000157669 #28	ENSGT00940000157833 #29	ENSGT00530000063698.b	ENSGT00940000156213 #30	ENSGT00940000156592 #31	ENSGT00940000157151 #32	ENSGT00940000159638 #33	ENSGT00940000153446.a.b
Euarchontoglires	ANCESTRAL SPECIES		ENSGT00940000163178	ENSGT00940000160073 #8	ENSGT01000000214440.A.a.b.a #9	ENSGT00940000156115 #10	ENSGT00530000063770.c.a #11	ENSGT00390000010045 #12	ENSGT00950000183182.a.a #13	ENSGT01090000260093.b #14	ENSGT00950000182978.B #15	ENSGT01060000248589.D #16	ENSGT00390000012569.a #17	ENSGT00390000006264 #18	ENSGT00950000183168.B.a #19	ENSGT00390000003312 #20	ENSGT00940000157582 #21	ENSGT00940000155543 #22	ENSGT00940000156139 #24	ENSGT00940000162094 #23	ENSGT00940000164873	ENSGT00390000002144 #25	ENSGT00410000025596.a.b #26	ENSGT00940000156761 #27	ENSGT00940000157669 #28	ENSGT00940000157833 #29	ENSGT00530000063698.b	ENSGT00940000156213 #30	ENSGT00940000156592 #31	ENSGT00940000157151 #32	ENSGT00940000159638 #33	ENSGT00940000153446.a.b	ENSGT00940000160209 #34
Euarchontoglires_A	ANCESTRAL SPECIES		ENSGT00940000157554 #7	ENSGT00940000160073 #8	ENSGT01000000214440.A.a.b.a #9	ENSGT00940000156115 #10	ENSGT00530000063770.c.a #11	ENSGT00390000010045 #12	ENSGT00950000183182.a.a #13	ENSGT01090000260093.b #14	ENSGT00950000182978.B #15	ENSGT01060000248589.D #16	ENSGT00390000012569.a #17	ENSGT00390000006264 #18	ENSGT00950000183168.B.a #19	ENSGT00390000003312 #20	ENSGT00940000157582 #21	ENSGT00940000155543 #22	ENSGT00940000156139 #24	ENSGT00940000162094 #23	ENSGT00390000002144 #25	ENSGT00410000025596.a.b #26	ENSGT00940000156761 #27	ENSGT00940000157669 #28	ENSGT00940000157833 #29	ENSGT00530000063698.b	ENSGT00940000156213 #30	ENSGT00940000156592 #31	ENSGT00940000157151 #32	ENSGT00940000159638 #33	ENSGT00940000153446.a.b	ENSGT00940000160209 #34	ENSGT00940000158079 #35
Glires	ANCESTRAL SPECIES		ENSGT00940000157554 #7	ENSGT00940000160073 #8	ENSGT01000000214440.A.a.b.a #9	ENSGT00940000156115 #10	ENSGT00530000063770.c.a #11	ENSGT00390000010045 #12	ENSGT00950000183182.a.a #13	ENSGT01090000260093.b #14	ENSGT00950000182978.B #15	ENSGT01060000248589.D #16	ENSGT00390000012569.a #17	ENSGT00390000006264 #18	ENSGT00950000183168.B.a #19	ENSGT00390000003312 #20	ENSGT00940000157582 #21	ENSGT00940000155543 #22	ENSGT00940000156139 #24	ENSGT00940000162094 #23	ENSGT00390000002144 #25	ENSGT00410000025596.a.b #26	ENSGT00940000156761 #27	ENSGT00940000157669 #28	ENSGT00940000157833 #29	ENSGT00530000063698.b	ENSGT00940000156213 #30	ENSGT00940000156592 #31	ENSGT00940000157151 #32	ENSGT00940000159638 #33	ENSGT00940000153446.a.b	ENSGT00940000160209 #34	ENSGT00940000158079 #35
Rodentia	ANCESTRAL SPECIES		ENSGT00940000157554 #7	ENSGT00940000160073 #8	ENSGT01000000214440.A.a.b.a #9	ENSGT00940000156115 #10	ENSGT00530000063770.c.a #11	ENSGT00390000010045 #12	ENSGT00950000183182.a.a #13	ENSGT01090000260093.b #14	ENSGT00950000182978.B #15	ENSGT01060000248589.D #16	ENSGT00390000012569.a #17	ENSGT00390000006264 #18	ENSGT00950000183168.B.a #19	ENSGT00390000003312 #20	ENSGT00940000157582 #21	ENSGT00940000155543 #22	ENSGT00940000156139 #24	ENSGT00940000162094 #23	ENSGT00390000002144 #25	ENSGT00410000025596.a.b #26	ENSGT00940000156761 #27	ENSGT00940000157669 #28	ENSGT00940000157833 #29	ENSGT00530000063698.b	ENSGT00940000156213 #30	ENSGT00940000156592 #31	ENSGT00940000157151 #32	ENSGT00940000159638 #33	ENSGT00940000153446.a.b	ENSGT00940000160209 #34	ENSGT00940000158079 #35
Rodentia_B	ANCESTRAL SPECIES		ENSGT00940000157554 #7	ENSGT00940000160073 #8	ENSGT01000000214440.A.a.b.a #9	ENSGT00940000156115 #10	ENSGT00530000063770.c.a #11	ENSGT00390000010045 #12	ENSGT00950000183182.a.a #13	ENSGT01090000260093.b #14	ENSGT00950000182978.B #15	ENSGT01060000248589.D #16	ENSGT00390000012569.a #17	ENSGT00390000006264 #18	ENSGT00950000183168.B.a #19	ENSGT00390000003312 #20	ENSGT00940000157582 #21	ENSGT00940000155543 #22	ENSGT00940000156139 #24	ENSGT00940000162094 #23	ENSGT00390000002144 #25	ENSGT00410000025596.a.b #26	ENSGT00940000156761 #27	ENSGT00940000157669 #28	ENSGT00940000157833 #29	ENSGT00530000063698.b	ENSGT00940000156213 #30	ENSGT00940000156592 #31	ENSGT00940000157151 #32	ENSGT00940000159638 #33	ENSGT00940000153446.a.b	ENSGT00940000160209 #34	ENSGT00940000158079 #35
Kangaroo rat	MODERN SPECIES	325	Fgr (ENSDORG00000015238) #7	Fam76a (ENSDORG00000000575) #8	Stx12 (ENSDORG00000001059) #9	ENSDORG00000025172 #10	Themis2 (ENSDORG00000003740) #11	Rpa2 (ENSDORG00000003741) #12	Smpdl3b (ENSDORG00000015612) #13	Xkr8 (ENSDORG00000023428) #14	Eya3 (ENSDORG00000015614) #15	Ptafr (ENSDORG00000027100) #16	Dnajc8 (ENSDORG00000004488) #17	Atpif1 (ENSDORG00000004489) #18	Sesn2 (ENSDORG00000004491) #19	Med18 (ENSDORG00000003626) #20	Phactr4 (ENSDORG00000003281) #21	Rcc1 (ENSDORG00000008750) #22	Rab42 (ENSDORG00000023607) #23	Trnau1ap (ENSDORG00000006349) #24	Taf12 (ENSDORG00000015036) #25	Gmeb1 (ENSDORG00000027761) #26	Ythdf2 (ENSDORG00000016564) #27	Oprd1 (ENSDORG00000015419) #28	ENSDORG00000028662 #29	Srsf4 (ENSDORG00000002459) #30	Mecr (ENSDORG00000002462) #31	Ptpru (ENSDORG00000002463) #32	Matn1 (ENSDORG00000009341) #33	Sdc3 (ENSDORG00000013924) #34	Pum1 (ENSDORG00000001875) #35	Nkain1 (ENSDORG00000000481) #36	Lrrc38 (ENSDORG00000030076) #37
Myomorpha	ANCESTRAL SPECIES	3	ENSGT00940000157554 #7	ENSGT00940000160073 #8	ENSGT01000000214440.A.a.b.a #9	ENSGT00940000156115 #10	ENSGT00530000063770.c.a #11	ENSGT00390000010045 #12	ENSGT00950000183182.a.a #13	ENSGT01090000260093.b #14	ENSGT00950000182978.B #15	ENSGT01060000248589.D #16	ENSGT00390000012569.a #17	ENSGT00390000006264 #18	ENSGT00950000183168.B.a #19	ENSGT00390000003312 #20	ENSGT00940000157582 #21	ENSGT00940000155543 #22	ENSGT00940000156139 #24	ENSGT00940000162094 #23	ENSGT00390000002144 #25	ENSGT00410000025596.a.b #26	ENSGT00940000156761 #27	ENSGT00940000157669 #28	ENSGT00940000157833 #29	ENSGT00530000063698.b	ENSGT00940000156213 #30	ENSGT00940000156592 #31	ENSGT00940000157151 #32	ENSGT00940000159638 #33	ENSGT00940000153446.a.b	ENSGT00940000160209 #34	ENSGT00940000158079 #35
Muroidea	ANCESTRAL SPECIES	3	ENSGT00940000157554 #7	ENSGT00940000160073 #8	ENSGT01000000214440.A.a.b.a #9	ENSGT00940000156115 #10	ENSGT00530000063770.c.a #11	ENSGT00390000010045 #12	ENSGT00950000183182.a.a #13	ENSGT01090000260093.b #14	ENSGT00950000182978.B #15	ENSGT01060000248589.D #16	ENSGT00390000012569.a #17	ENSGT00390000006264 #18	ENSGT00950000183168.B.a #19	ENSGT00390000003312 #20	ENSGT00940000157582 #21	ENSGT00940000155543 #22	ENSGT00940000156139 #24	ENSGT00940000162094 #23	ENSGT00390000002144 #25	ENSGT00410000025596.a.b #26	ENSGT00940000156761 #27	ENSGT00940000157669 #28	ENSGT00940000157833 #29	ENSGT00530000063698.b	ENSGT00940000156213 #30	ENSGT00940000156592 #31	ENSGT00940000157151 #32	ENSGT00940000159638 #33	ENSGT00940000153446.a.b	ENSGT00940000160209 #34	ENSGT00940000158079 #35
Muroidea_A	ANCESTRAL SPECIES	3	ENSGT00940000157554 #7	ENSGT00940000160073 #8	ENSGT01000000214440.A.a.b.a #9	ENSGT00940000156115 #10	ENSGT00530000063770.c.a #11	ENSGT00390000010045 #12	ENSGT00950000183182.a.a #13	ENSGT01090000260093.b #14	ENSGT00950000182978.B #15	ENSGT01060000248589.D #16	ENSGT00390000012569.a #17	ENSGT00390000006264 #18	ENSGT00950000183168.B.a #19	ENSGT00390000003312 #20	ENSGT00940000157582 #21	ENSGT00940000155543 #22	ENSGT00940000156139 #24	ENSGT00940000162094 #23	ENSGT00390000002144 #25	ENSGT00410000025596.a.b #26	ENSGT00940000156761 #27	ENSGT00940000157669 #28	ENSGT00860000135912	ENSGT00940000157833 #29	ENSGT00530000063698.b	ENSGT00940000156213 #30	ENSGT00940000156592 #31	ENSGT00940000157151 #32	ENSGT00940000159638 #33	ENSGT00940000153446.a.b	ENSGT00940000160209 #34
Cricetidae	ANCESTRAL SPECIES	2	ENSGT00390000018883	ENSGT00940000157554 #7	ENSGT00940000160073 #8	ENSGT01000000214440.A.a.b.a #9	ENSGT00940000156115 #10	ENSGT00530000063770.c.a #11	ENSGT00390000010045 #12	ENSGT00950000183182.a.a #13	ENSGT01090000260093.b #14	ENSGT00950000182978.B #15	ENSGT01060000248589.D #16	ENSGT00940000164617	ENSGT00950000183168.B.a #19	ENSGT00390000003312 #20	ENSGT00940000157582 #21	ENSGT00940000155543 #22	ENSGT00940000156139 #24	ENSGT00940000162094 #23	ENSGT00390000002144 #25	ENSGT00410000025596.a.b #26	ENSGT00940000156761 #27	ENSGT00940000157669 #28	ENSGT00860000135912	ENSGT00940000157833 #29	ENSGT00530000063698.b	ENSGT00940000156213 #30	ENSGT00940000156592 #31	ENSGT00940000157151 #32	ENSGT00940000159638 #33	ENSGT00940000153446.a.b	ENSGT00940000160209 #34
Cricetinae	ANCESTRAL SPECIES	5	ENSGT00940000157554 #7	ENSGT00940000160073 #8	ENSGT01000000214440.A.a.b.a #9	ENSGT00940000156115 #10	ENSGT00530000063770.c.a #11	ENSGT00390000010045 #12	ENSGT00950000183182.a.a #13	ENSGT01090000260093.b #14	ENSGT00950000182978.B #15	ENSGT01060000248589.D #16	ENSGT00390000012569.a #17	ENSGT00390000006264 #18	ENSGT00950000183168.B.a #19	ENSGT00390000003312 #20	ENSGT00940000157582 #21	ENSGT00940000155543 #22	ENSGT00940000156139 #24	ENSGT00940000162094 #23	ENSGT00390000002144 #25	ENSGT00410000025596.a.b #26	ENSGT00940000156761 #27	ENSGT00940000157669 #28	ENSGT00860000135912	ENSGT00940000157833 #29	ENSGT00530000063698.b	ENSGT00940000156213 #30	ENSGT00940000156592 #31	ENSGT00940000157151 #32	ENSGT00940000159638 #33	ENSGT00940000153446.a.b	ENSGT00940000160209 #34
Chinese hamster chok1gshd	DUPLICATION
Chinese hamster chok1gshd	MODERN SPECIES	111	Fgr (ENSCGRG00001024485) #7	ENSCGRG00001007863 #8	Stx12 (ENSCGRG00001016934) #9	Ppp1r8 (ENSCGRG00001019839) #10	Themis2 (ENSCGRG00001024729) #11	Rpa2 (ENSCGRG00001007332) #12	Smpdl3b (ENSCGRG00001016883) #13	Xkr8 (ENSCGRG00001017118) #14	Eya3 (ENSCGRG00001018576) #15	Ptafr (ENSCGRG00001012404) #16	ENSCGRG00001000534 #17	Atpif1 (ENSCGRG00001023397) #18	Sesn2 (ENSCGRG00001020650) #19	MED18 (ENSCGRG00001022480) #20	Phactr4 (ENSCGRG00001021956) #21	ENSCGRG00001023596 #22	Trnau1ap (ENSCGRG00001004713) #24	Rab42 (ENSCGRG00001019426) #23	Taf12 (ENSCGRG00001024959) #25	Gmeb1 (ENSCGRG00001022851) #26	Ythdf2 (ENSCGRG00001016726) #27	Oprd1 (ENSCGRG00001010255) #28	ENSCGRG00001024915	Epb41 (ENSCGRG00001021983) #29	Tmem200b (ENSCGRG00001010757)	Srsf4 (ENSCGRG00001021115) #30	Mecr (ENSCGRG00001024597) #31	Ptpru (ENSCGRG00001023937) #32	Matn1 (ENSCGRG00001019479) #33	Laptm5 (ENSCGRG00001021108)	Sdc3 (ENSCGRG00001023681) #34
Chinese hamster chok1gshd	MODERN SPECIES	1	ENSCGRG00001010369	2210408I21Rik (ENSCGRG00001009297)	Slf1 (ENSCGRG00001007173)	Mctp1 (ENSCGRG00001011214)	ENSCGRG00001007825	Fam81b (ENSCGRG00001005643)	Skic3 (ENSCGRG00001016182)	Arsk (ENSCGRG00001019637)	ENSCGRG00001010656	Rfesd (ENSCGRG00001018403)	Spata9 (ENSCGRG00001018426)	Rhobtb3 (ENSCGRG00001016766)	Glrx (ENSCGRG00001012408)	Ell2 (ENSCGRG00001012065)	Pcsk1 (ENSCGRG00001012020)	ENSCGRG00001007082 #22	Cast (ENSCGRG00001002654)	Erap1 (ENSCGRG00001007105)	ENSCGRG00001007786	ENSCGRG00001008373	Lnpep (ENSCGRG00001016259)	Lix1 (ENSCGRG00001017834)	Riok2 (ENSCGRG00001000871)	ENSCGRG00001024900	ENSCGRG00001009968	Rgmb (ENSCGRG00001012341)	Chd1 (ENSCGRG00001023943)	Prdm9 (ENSCGRG00001005716)	Pdcd2 (ENSCGRG00001010000)	Tbp (ENSCGRG00001001372)	Psmb1 (ENSCGRG00001009770)
Golden Hamster	MODERN SPECIES	709	Ahdc1 (ENSMAUG00000013108)	Fgr (ENSMAUG00000006765) #7	Fam76a (ENSMAUG00000016561) #8	Stx12 (ENSMAUG00000016314) #9	Ppp1r8 (ENSMAUG00000009797) #10	Themis2 (ENSMAUG00000000821) #11	Rpa2 (ENSMAUG00000002825) #12	Smpdl3b (ENSMAUG00000014184) #13	Xkr8 (ENSMAUG00000009395) #14	Eya3 (ENSMAUG00000015674) #15	Ptafr (ENSMAUG00000008850) #16	ENSMAUG00000018320	Sesn2 (ENSMAUG00000000726) #19	Med18 (ENSMAUG00000019176) #20	Phactr4 (ENSMAUG00000018484) #21	Rcc1 (ENSMAUG00000020618) #22	ENSMAUG00000020183	Rab42 (ENSMAUG00000020223) #23	Taf12 (ENSMAUG00000019991) #25	Gmeb1 (ENSMAUG00000008912) #26	ENSMAUG00000010032 #27	Oprd1 (ENSMAUG00000012704) #28	ENSMAUG00000001636 #29	Tmem200b (ENSMAUG00000021672)	Srsf4 (ENSMAUG00000021940) #30	Mecr (ENSMAUG00000021996) #31	Ptpru (ENSMAUG00000016330) #32	Matn1 (ENSMAUG00000019156) #33	Laptm5 (ENSMAUG00000013566)	Pum1 (ENSMAUG00000022090) #35	Nkain1 (ENSMAUG00000010811) #36
Cricetidae_B	ANCESTRAL SPECIES	2	ENSGT00940000157554 #7	ENSGT00940000160073 #8	ENSGT01000000214440.A.a.b.a #9	ENSGT00940000156115 #10	ENSGT00530000063770.c.a #11	ENSGT00390000010045 #12	ENSGT00950000183182.a.a #13	ENSGT01090000260093.b #14	ENSGT00950000182978.B #15	ENSGT01060000248589.D #16	ENSGT00390000012569.a #17	ENSGT00390000006264 #18	ENSGT00950000183168.B.a #19	ENSGT00390000003312 #20	ENSGT00940000157582 #21	ENSGT00940000155543 #22	ENSGT00940000156139 #24	ENSGT00940000162094 #23	ENSGT00390000002144 #25	ENSGT00410000025596.a.b #26	ENSGT00940000156761 #27	ENSGT00940000157669 #28	ENSGT00940000157833 #29	ENSGT00530000063698.b	ENSGT00940000156213 #30	ENSGT00940000156592 #31	ENSGT00940000157151 #32	ENSGT00940000159638 #33	ENSGT00940000153446.a.b	ENSGT00940000160209 #34	ENSGT00940000158079 #35
Northern American deer mouse	MODERN SPECIES	11	ENSPEMG00000014678 #8	Stx12 (ENSPEMG00000025346) #9	Ppp1r8 (ENSPEMG00000003512) #10	Themis2 (ENSPEMG00000008336) #11	Rpa2 (ENSPEMG00000006270) #12	Smpdl3b (ENSPEMG00000003316) #13	Xkr8 (ENSPEMG00000025921) #14	Eya3 (ENSPEMG00000000391) #15	Ptafr (ENSPEMG00000025544) #16	Dnajc8 (ENSPEMG00000013544) #17	Atpif1 (ENSPEMG00000025196) #18	Sesn2 (ENSPEMG00000001779) #19	Med18 (ENSPEMG00000015562) #20	ENSPEMG00000004708	Phactr4 (ENSPEMG00000000179) #21	Rcc1 (ENSPEMG00000016697) #22	Trnau1ap (ENSPEMG00000007877) #24	Rab42 (ENSPEMG00000027698) #23	Taf12 (ENSPEMG00000015879) #25	Ythdf2 (ENSPEMG00000014903) #27	Oprd1 (ENSPEMG00000007805) #28	Epb41 (ENSPEMG00000016438) #29	Tmem200b (ENSPEMG00000012688)	Srsf4 (ENSPEMG00000003365) #30	Mecr (ENSPEMG00000009582) #31	Ptpru (ENSPEMG00000010874) #32	Matn1 (ENSPEMG00000017513) #33	Laptm5 (ENSPEMG00000016483)	Sdc3 (ENSPEMG00000015709) #34	Pum1 (ENSPEMG00000010009) #35	Nkain1 (ENSPEMG00000000116) #36
Prairie vole	MODERN SPECIES	1	Fgr (ENSMOCG00000019562) #7	Fam76a (ENSMOCG00000021395) #8	Stx12 (ENSMOCG00000014196) #9	ENSMOCG00000022691 #10	Themis2 (ENSMOCG00000003168) #11	Rpa2 (ENSMOCG00000007092) #12	Smpdl3b (ENSMOCG00000016324) #13	Xkr8 (ENSMOCG00000002218) #14	Eya3 (ENSMOCG00000004582) #15	Ptafr (ENSMOCG00000013409) #16	Dnajc8 (ENSMOCG00000017213) #17	Atpif1 (ENSMOCG00000002419) #18	Sesn2 (ENSMOCG00000012718) #19	Med18 (ENSMOCG00000022182) #20	Phactr4 (ENSMOCG00000012753) #21	Rcc1 (ENSMOCG00000016589) #22	Trnau1ap (ENSMOCG00000011189) #24	Rab42 (ENSMOCG00000021639) #23	Taf12 (ENSMOCG00000006333) #25	Gmeb1 (ENSMOCG00000012332) #26	Ythdf2 (ENSMOCG00000018361) #27	Oprd1 (ENSMOCG00000018388) #28	Epb41 (ENSMOCG00000022373) #29	Tmem200b (ENSMOCG00000014010)	Srsf4 (ENSMOCG00000013319) #30	Mecr (ENSMOCG00000017926) #31	Ptpru (ENSMOCG00000019862) #32	Matn1 (ENSMOCG00000011816) #33	Laptm5 (ENSMOCG00000014297)	Sdc3 (ENSMOCG00000020345) #34	Pum1 (ENSMOCG00000015463) #35
Murinae	ANCESTRAL SPECIES	2	ENSGT00940000157554 #7	ENSGT00940000160073 #8	ENSGT01000000214440.A.a.b.a #9	ENSGT00940000156115 #10	ENSGT00530000063770.c.a #11	ENSGT00390000010045 #12	ENSGT00950000183182.a.a #13	ENSGT01090000260093.b #14	ENSGT00950000182978.B #15	ENSGT01060000248589.D #16	ENSGT00390000012569.a #17	ENSGT00390000006264 #18	ENSGT00950000183168.B.a #19	ENSGT00390000003312 #20	ENSGT00940000157582 #21	ENSGT00940000155543 #22	ENSGT00940000156139 #24	ENSGT00940000162094 #23	ENSGT00390000002144 #25	ENSGT00410000025596.a.b #26	ENSGT00940000156761 #27	ENSGT00940000157669 #28	ENSGT00860000135912	ENSGT00940000157833 #29	ENSGT00530000063698.b	ENSGT00940000156213 #30	ENSGT00940000156592 #31	ENSGT00940000157151 #32	ENSGT00940000159638 #33	ENSGT00940000153446.a.b	ENSGT00940000160209 #34
Mus	ANCESTRAL SPECIES	3	ENSGT00940000157554 #7	ENSGT00940000160073 #8	ENSGT01000000214440.A.a.b.a #9	ENSGT00940000156115 #10	ENSGT00530000063770.c.a #11	ENSGT00390000010045 #12	ENSGT00950000183182.a.a #13	ENSGT01090000260093.b #14	ENSGT00950000182978.B #15	ENSGT01060000248589.D #16	ENSGT00390000012569.a #17	ENSGT00390000006264 #18	ENSGT00950000183168.B.a #19	ENSGT00390000003312 #20	ENSGT00940000157582 #21	ENSGT00940000155543 #22	ENSGT00940000156139 #24	ENSGT00940000162094 #23	ENSGT00390000002144 #25	ENSGT00410000025596.a.b #26	ENSGT00940000156761 #27	ENSGT00940000157669 #28	ENSGT00860000135912	ENSGT00940000157833 #29	ENSGT00530000063698.b	ENSGT00940000156213 #30	ENSGT00940000156592 #31	ENSGT00940000157151 #32	ENSGT00940000159638 #33	ENSGT00940000153446.a.b	ENSGT00940000160209 #34
Mus_A	ANCESTRAL SPECIES	3	ENSGT00940000157554 #7	ENSGT00940000160073 #8	ENSGT01000000214440.A.a.b.a #9	ENSGT00940000156115 #10	ENSGT00530000063770.c.a #11	ENSGT00390000010045 #12	ENSGT00950000183182.a.a #13	ENSGT01090000260093.b #14	ENSGT00950000182978.B #15	ENSGT01060000248589.D #16	ENSGT00390000012569.a #17	ENSGT00390000006264 #18	ENSGT00950000183168.B.a #19	ENSGT00390000003312 #20	ENSGT00940000157582 #21	ENSGT00940000155543 #22	ENSGT00940000156139 #24	ENSGT00940000162094 #23	ENSGT00390000002144 #25	ENSGT00410000025596.a.b #26	ENSGT00940000156761 #27	ENSGT00940000157669 #28	ENSGT00860000135912	ENSGT00940000157833 #29	ENSGT00530000063698.b	ENSGT00940000156213 #30	ENSGT00940000156592 #31	ENSGT00940000157151 #32	ENSGT00940000159638 #33	ENSGT00940000153446.a.b	ENSGT00940000160209 #34
Mus_B	ANCESTRAL SPECIES	5	ENSGT00940000157554 #7	ENSGT00940000160073 #8	ENSGT01000000214440.A.a.b.a #9	ENSGT00940000156115 #10	ENSGT00530000063770.c.a #11	ENSGT00390000010045 #12	ENSGT00950000183182.a.a #13	ENSGT01090000260093.b #14	ENSGT00950000182978.B #15	ENSGT01060000248589.D #16	ENSGT00390000012569.a #17	ENSGT00390000006264 #18	ENSGT00950000183168.B.a #19	ENSGT00390000003312 #20	ENSGT00940000157582 #21	ENSGT00940000155543 #22	ENSGT00940000156139 #24	ENSGT00940000162094 #23	ENSGT00390000002144 #25	ENSGT00410000025596.a.b #26	ENSGT00940000156761 #27	ENSGT00940000157669 #28	ENSGT00860000135912	ENSGT00940000157833 #29	ENSGT00530000063698.b	ENSGT00940000156213 #30	ENSGT00940000156592 #31	ENSGT00940000157151 #32	ENSGT00940000159638 #33	ENSGT00940000153446.a.b	ENSGT00940000160209 #34
Mouse	MODERN SPECIES	13	Fgr (ENSMUSG00000028874) #7	Fam76a (ENSMUSG00000028878) #8	Stx12 (ENSMUSG00000028879) #9	Ppp1r8 (ENSMUSG00000028882) #10	Themis2 (ENSMUSG00000037731) #11	Rpa2 (ENSMUSG00000028884) #12	Smpdl3b (ENSMUSG00000028885) #13	Xkr8 (ENSMUSG00000037752) #14	Eya3 (ENSMUSG00000028886) #15	Ptafr (ENSMUSG00000056529) #16	Dnajc8 (ENSMUSG00000054405) #17	Atpif1 (ENSMUSG00000054428) #18	Sesn2 (ENSMUSG00000028893) #19	Med18 (ENSMUSG00000066042) #20	Phactr4 (ENSMUSG00000066043) #21	Rcc1 (ENSMUSG00000028896) #22	Trnau1ap (ENSMUSG00000028898) #24	Rab42 (ENSMUSG00000089687) #23	Taf12 (ENSMUSG00000028899) #25	Gmeb1 (ENSMUSG00000028901) #26	Ythdf2 (ENSMUSG00000040025) #27	Oprd1 (ENSMUSG00000050511) #28	Epb41 (ENSMUSG00000028906) #29	Tmem200b (ENSMUSG00000070720)	Srsf4 (ENSMUSG00000028911) #30	Mecr (ENSMUSG00000028910) #31	Ptpru (ENSMUSG00000028909) #32	Matn1 (ENSMUSG00000040533) #33	Laptm5 (ENSMUSG00000028581)	Sdc3 (ENSMUSG00000025743) #34	Pum1 (ENSMUSG00000028580) #35
Mus_C	ANCESTRAL SPECIES	2	ENSGT00940000157554 #7	ENSGT00940000160073.g #8	ENSGT01000000214440.A.a.b.a #9	ENSGT00940000156115 #10	ENSGT00530000063770.c.a #11	ENSGT00390000010045 #12	ENSGT00950000183182.a.a #13	ENSGT01090000260093.b #14	ENSGT00950000182978.B #15	ENSGT01060000248589.D #16	ENSGT00390000012569.a #17	ENSGT00390000006264 #18	ENSGT00950000183168.B.a #19	ENSGT00390000003312 #20	ENSGT00940000157582 #21	ENSGT00940000155543 #22	ENSGT00940000156139 #24	ENSGT00940000162094 #23	ENSGT00390000002144 #25	ENSGT00410000025596.a.b #26	ENSGT00940000156761 #27	ENSGT00940000157669 #28	ENSGT00860000135912	ENSGT00940000157833 #29	ENSGT00530000063698.b	ENSGT00940000156213 #30	ENSGT00940000156592 #31	ENSGT00940000157151 #32	ENSGT00940000159638 #33	ENSGT00940000153446.a.b	ENSGT00940000160209 #34
Steppe mouse	MODERN SPECIES	2797				Themis2 (ENSMSIG00000008497) #11	Rpa2 (ENSMSIG00000008505) #12	Smpdl3b (ENSMSIG00000008523) #13	Eya3 (ENSMSIG00000008546) #15	Xkr8 (ENSMSIG00000008821) #14	Ptafr (ENSMSIG00000008840) #16	Dnajc8 (ENSMSIG00000008847) #17	ENSMSIG00000009011	Atpif1 (ENSMSIG00000009020) #18	Sesn2 (ENSMSIG00000009040) #19	Med18 (ENSMSIG00000009082) #20	Phactr4 (ENSMSIG00000009106) #21	Rcc1 (ENSMSIG00000009244) #22	ENSMSIG00000009341 #24	Rab42 (ENSMSIG00000009484) #23	Taf12 (ENSMSIG00000009505) #25	Gmeb1 (ENSMSIG00000009569) #26	ENSMSIG00000009595	ENSMSIG00000009602 #27	Oprd1 (ENSMSIG00000009620) #28	Epb41 (ENSMSIG00000009639) #29	ENSMSIG00000012064	Tmem200b (ENSMSIG00000012073)
spretus	MODERN SPECIES	13	Fgr (MGP_SPRETEiJ_G0027560) #7	Fam76a (MGP_SPRETEiJ_G0027559) #8	Stx12 (MGP_SPRETEiJ_G0027558) #9	Ppp1r8 (MGP_SPRETEiJ_G0027557) #10	Themis2 (MGP_SPRETEiJ_G0027556) #11	Rpa2 (MGP_SPRETEiJ_G0027555) #12	Smpdl3b (MGP_SPRETEiJ_G0027554) #13	Xkr8 (MGP_SPRETEiJ_G0027553) #14	Eya3 (MGP_SPRETEiJ_G0027552) #15	Ptafr (MGP_SPRETEiJ_G0027551) #16	Dnajc8 (MGP_SPRETEiJ_G0027550) #17	Atpif1 (MGP_SPRETEiJ_G0027549) #18	Sesn2 (MGP_SPRETEiJ_G0027548) #19	Med18 (MGP_SPRETEiJ_G0027547) #20	Phactr4 (MGP_SPRETEiJ_G0027546) #21	Rcc1 (MGP_SPRETEiJ_G0027545) #22	Trnau1ap (MGP_SPRETEiJ_G0027544) #24	Rab42 (MGP_SPRETEiJ_G0027543) #23	Taf12 (MGP_SPRETEiJ_G0027542) #25	Gmeb1 (MGP_SPRETEiJ_G0027541) #26	MGP_SPRETEiJ_G0027540 #27	Oprd1 (MGP_SPRETEiJ_G0027539) #28	MGP_SPRETEiJ_G0027538	Epb41 (MGP_SPRETEiJ_G0027537) #29	Tmem200b (MGP_SPRETEiJ_G0027536)	Srsf4 (MGP_SPRETEiJ_G0027535) #30	MGP_SPRETEiJ_G0027534 #31	Ptpru (MGP_SPRETEiJ_G0027533) #32	Matn1 (MGP_SPRETEiJ_G0027532) #33	Laptm5 (MGP_SPRETEiJ_G0027531)	Sdc3 (MGP_SPRETEiJ_G0027530) #34
Ryukyu mouse	MODERN SPECIES	13	Fgr (MGP_CAROLIEiJ_G0026579) #7	Fam76a (MGP_CAROLIEiJ_G0026578) #8	Stx12 (MGP_CAROLIEiJ_G0026577) #9	Ppp1r8 (MGP_CAROLIEiJ_G0026576) #10	Themis2 (MGP_CAROLIEiJ_G0026575) #11	Rpa2 (MGP_CAROLIEiJ_G0026574) #12	Smpdl3b (MGP_CAROLIEiJ_G0026573) #13	Xkr8 (MGP_CAROLIEiJ_G0026572) #14	Eya3 (MGP_CAROLIEiJ_G0026571) #15	Ptafr (MGP_CAROLIEiJ_G0026570) #16	MGP_CAROLIEiJ_G0026569 #17	Atpif1 (MGP_CAROLIEiJ_G0026568) #18	Sesn2 (MGP_CAROLIEiJ_G0026567) #19	Med18 (MGP_CAROLIEiJ_G0026566) #20	Phactr4 (MGP_CAROLIEiJ_G0026565) #21	Rcc1 (MGP_CAROLIEiJ_G0026564) #22	Trnau1ap (MGP_CAROLIEiJ_G0026563) #24	Gmeb1 (MGP_CAROLIEiJ_G0026561) #26	Oprd1 (MGP_CAROLIEiJ_G0026559) #28	MGP_CAROLIEiJ_G0026558	Epb41 (MGP_CAROLIEiJ_G0026557) #29	Tmem200b (MGP_CAROLIEiJ_G0026556)	Srsf4 (MGP_CAROLIEiJ_G0026555) #30	Mecr (MGP_CAROLIEiJ_G0026554) #31	Ptpru (MGP_CAROLIEiJ_G0026553) #32	Matn1 (MGP_CAROLIEiJ_G0026552) #33	Laptm5 (MGP_CAROLIEiJ_G0026551)	Sdc3 (MGP_CAROLIEiJ_G0026550) #34	Pum1 (MGP_CAROLIEiJ_G0026549) #35	Nkain1 (MGP_CAROLIEiJ_G0026548) #36	Snrnp40 (MGP_CAROLIEiJ_G0026547)
Shrew mouse	MODERN SPECIES	19	Fgr (MGP_PahariEiJ_G0028912) #7	Fam76a (MGP_PahariEiJ_G0028911) #8	MGP_PahariEiJ_G0028910 #9	Ppp1r8 (MGP_PahariEiJ_G0028909) #10	Themis2 (MGP_PahariEiJ_G0028908) #11	Rpa2 (MGP_PahariEiJ_G0028907) #12	Smpdl3b (MGP_PahariEiJ_G0028906) #13	Xkr8 (MGP_PahariEiJ_G0028905) #14	Eya3 (MGP_PahariEiJ_G0028904) #15	Ptafr (MGP_PahariEiJ_G0028903) #16	MGP_PahariEiJ_G0028902 #17	Atpif1 (MGP_PahariEiJ_G0028901) #18	Sesn2 (MGP_PahariEiJ_G0028900) #19	Med18 (MGP_PahariEiJ_G0028899) #20	Phactr4 (MGP_PahariEiJ_G0028898) #21	Rcc1 (MGP_PahariEiJ_G0028897) #22	Trnau1ap (MGP_PahariEiJ_G0028896) #24	Rab42 (MGP_PahariEiJ_G0028895) #23	Taf12 (MGP_PahariEiJ_G0028894) #25	Gmeb1 (MGP_PahariEiJ_G0028893) #26	Ythdf2 (MGP_PahariEiJ_G0028892) #27	Oprd1 (MGP_PahariEiJ_G0028891) #28	MGP_PahariEiJ_G0028890	Epb41 (MGP_PahariEiJ_G0028889) #29	Tmem200b (MGP_PahariEiJ_G0028888)	Srsf4 (MGP_PahariEiJ_G0028887) #30	Mecr (MGP_PahariEiJ_G0028886) #31	Ptpru (MGP_PahariEiJ_G0028885) #32	Matn1 (MGP_PahariEiJ_G0028884) #33	Laptm5 (MGP_PahariEiJ_G0028883)	Sdc3 (MGP_PahariEiJ_G0028882) #34
Rat	MODERN SPECIES	15	Fam76a (ENSRNOG00000011254) #8	Stx12 (ENSRNOG00000011804) #9	Ppp1r8 (ENSRNOG00000059550) #10	Themis2 (ENSRNOG00000012965) #11	Rpa2 (ENSRNOG00000013005) #12	Smpdl3b (ENSRNOG00000042326) #13	Xkr8 (ENSRNOG00000024312) #14	Eya3 (ENSRNOG00000010396) #15	Ptafr (ENSRNOG00000013231) #16	Dnajc8 (ENSRNOG00000013255) #17	Atp5if1 (ENSRNOG00000013300) #18	Sesn2 (ENSRNOG00000042785) #19	Med18 (ENSRNOG00000067073) #20	LOC120102993 (ENSRNOG00000031506)	Phactr4 (ENSRNOG00000046922) #21	Rcc1 (ENSRNOG00000050106) #22	Trnau1ap (ENSRNOG00000055344) #24	Rab42 (ENSRNOG00000063150) #23	Taf12 (ENSRNOG00000048288) #25	Gmeb1 (ENSRNOG00000010910) #26	Ythdf2 (ENSRNOG00000010892) #27	Oprd1 (ENSRNOG00000010531) #28	Epb41 (ENSRNOG00000010037) #29	Tmem200b (ENSRNOG00000065288)	Srsf4 (ENSRNOG00000010007) #30	Mecr (ENSRNOG00000028047) #31	Ptpru (ENSRNOG00000013515) #32	Matn1 (ENSRNOG00000010932) #33	Laptm5 (ENSRNOG00000011054)	Sdc3 (ENSRNOG00000011927) #34	Pum1 (ENSRNOG00000011709) #35
Upper Galilee mountains blind mole rat	MODERN SPECIES	1411						Rpa2 (ENSNGAG00000004922) #12	Smpdl3b (ENSNGAG00000018059) #13	Xkr8 (ENSNGAG00000000492) #14	Eya3 (ENSNGAG00000018153) #15	Ptafr (ENSNGAG00000012034) #16	Dnajc8 (ENSNGAG00000011117) #17	Atpif1 (ENSNGAG00000020924) #18	Sesn2 (ENSNGAG00000019093) #19	ENSNGAG00000020389 #20	Phactr4 (ENSNGAG00000004944) #21	Rcc1 (ENSNGAG00000000590) #22	Trnau1ap (ENSNGAG00000015881) #24	Rab42 (ENSNGAG00000015676) #23	ENSNGAG00000015280 #25	Gmeb1 (ENSNGAG00000015007) #26	Ythdf2 (ENSNGAG00000014432) #27	Oprd1 (ENSNGAG00000013802) #28	Epb41 (ENSNGAG00000013126) #29	Tmem200b (ENSNGAG00000012572)	Srsf4 (ENSNGAG00000012225) #30	Mecr (ENSNGAG00000011918) #31	Ptpru (ENSNGAG00000011573) #32
Lesser Egyptian jerboa	MODERN SPECIES	201	ENSJJAG00000002452 #8	Stx12 (ENSJJAG00000004079) #9	ENSJJAG00000010784 #10	Themis2 (ENSJJAG00000012926) #11	ENSJJAG00000014579 #12	Smpdl3b (ENSJJAG00000015036) #13	Xkr8 (ENSJJAG00000015552) #14	Eya3 (ENSJJAG00000017580) #15	Ptafr (ENSJJAG00000012719) #16	ENSJJAG00000009301	Atpif1 (ENSJJAG00000010517) #18	Sesn2 (ENSJJAG00000011184) #19	Phactr4 (ENSJJAG00000015640) #21	ENSJJAG00000022388	ENSJJAG00000012669	Rcc1 (ENSJJAG00000002119) #22	Trnau1ap (ENSJJAG00000010128) #24	Rab42 (ENSJJAG00000021507) #23	ENSJJAG00000022021 #25	Gmeb1 (ENSJJAG00000000647) #26	Ythdf2 (ENSJJAG00000013745) #27	ENSJJAG00000012769	Oprd1 (ENSJJAG00000015113) #28	Epb41 (ENSJJAG00000015995) #29	Tmem200b (ENSJJAG00000020828)	Srsf4 (ENSJJAG00000022153) #30	Mecr (ENSJJAG00000002955) #31	Ptpru (ENSJJAG00000012562) #32	ENSJJAG00000010350
Rodentia_A	ANCESTRAL SPECIES		ENSGT00940000157554 #7	ENSGT00940000160073 #8	ENSGT01000000214440.A.a.b.a #9	ENSGT00940000156115 #10	ENSGT00530000063770.c.a #11	ENSGT00390000010045 #12	ENSGT00950000183182.a.a #13	ENSGT01090000260093.b #14	ENSGT00950000182978.B #15	ENSGT01060000248589.D #16	ENSGT00390000012569.a #17	ENSGT00390000006264 #18	ENSGT00950000183168.B.a #19	ENSGT00390000003312 #20	ENSGT00940000157582 #21	ENSGT00940000155543 #22	ENSGT00940000156139 #24	ENSGT00940000162094 #23	ENSGT00390000002144 #25	ENSGT00410000025596.a.b #26	ENSGT00940000156761.j #27	ENSGT00940000157669 #28	ENSGT00940000157833 #29	ENSGT00530000063698.b	ENSGT00940000156213 #30	ENSGT00940000156592 #31	ENSGT00940000157151 #32	ENSGT00940000159638 #33	ENSGT00940000153446.a.b	ENSGT00940000160209 #34	ENSGT00940000158079 #35
Sciuridae	ANCESTRAL SPECIES	3	ENSGT00940000157554 #7	ENSGT00940000160073 #8	ENSGT01000000214440.A.a.b.a #9	ENSGT00940000156115 #10	ENSGT00530000063770.c.a #11	ENSGT00390000010045 #12	ENSGT00950000183182.a.a #13	ENSGT01090000260093.b #14	ENSGT00950000182978.B #15	ENSGT01060000248589.D #16	ENSGT00390000012569.a #17	ENSGT00390000006264 #18	ENSGT00950000183168.B.a #19	ENSGT00390000003312 #20	ENSGT00940000157582 #21	ENSGT00940000155543 #22	ENSGT00940000156139 #24	ENSGT00940000162094 #23	ENSGT00390000002144 #25	ENSGT00410000025596.a.b #26	ENSGT00940000156761.j #27	ENSGT00940000157669 #28	ENSGT00940000157833 #29	ENSGT00530000063698.b	ENSGT00940000156213 #30	ENSGT00940000156592 #31	ENSGT00940000157151 #32	ENSGT00940000159638 #33	ENSGT00940000153446.a.b	ENSGT00940000160209 #34	ENSGT00940000158079 #35
Marmotini	ANCESTRAL SPECIES		ENSGT00940000160073 #8	ENSGT01000000214440.A.a.b.a #9	ENSGT00960000190607	ENSGT00940000156115 #10	ENSGT00530000063770.c.a #11	ENSGT00390000010045 #12	ENSGT00950000183182.a.a #13	ENSGT01090000260093.b #14	ENSGT00950000182978.B #15	ENSGT01060000248589.D #16	ENSGT00390000012569.a #17	ENSGT00390000006264 #18	ENSGT00950000183168.B.a #19	ENSGT00390000003312 #20	ENSGT00940000157582 #21	ENSGT00940000155543 #22	ENSGT00940000156139 #24	ENSGT00940000162094 #23	ENSGT00390000002144 #25	ENSGT00410000025596.a.b #26	ENSGT00940000156761.j #27	ENSGT00940000157669 #28	ENSGT00940000157833 #29	ENSGT00530000063698.b	ENSGT00940000156213 #30	ENSGT00940000156592 #31	ENSGT00940000157151 #32	ENSGT00940000159638 #33	ENSGT00940000153446.a.b	ENSGT00940000160209 #34	ENSGT00940000158079 #35
Marmotini_b	ANCESTRAL SPECIES		ENSGT00940000160073 #8	ENSGT01000000214440.A.a.b.a #9	ENSGT00960000190607	ENSGT00940000156115 #10	ENSGT00530000063770.c.a #11	ENSGT00390000010045 #12	ENSGT00950000183182.a.a #13	ENSGT01090000260093.b #14	ENSGT00950000182978.B #15	ENSGT01060000248589.D #16	ENSGT00390000012569.a #17	ENSGT00390000006264 #18	ENSGT00950000183168.B.a #19	ENSGT00390000003312 #20	ENSGT00940000157582 #21	ENSGT00940000155543 #22	ENSGT00940000156139 #24	ENSGT00940000162094 #23	ENSGT00390000002144 #25	ENSGT00410000025596.a.b #26	ENSGT00940000156761.j #27	ENSGT00940000157669 #28	ENSGT00940000157833 #29	ENSGT00530000063698.b	ENSGT00940000156213 #30	ENSGT00940000156592 #31	ENSGT00940000157151 #32	ENSGT00940000159638 #33	ENSGT00940000153446.a.b	ENSGT00940000160209 #34	ENSGT00940000158079 #35
Arctic ground squirrel	MODERN SPECIES	92	FAM76A (ENSUPAG00010021053) #8	STX12 (ENSUPAG00010021044) #9	ENSUPAG00010021039	PPP1R8 (ENSUPAG00010021025) #10	THEMIS2 (ENSUPAG00010021016) #11	SMPDL3B (ENSUPAG00010021005) #13	XKR8 (ENSUPAG00010020998) #14	EYA3 (ENSUPAG00010020872) #15	PTAFR (ENSUPAG00010020865) #16	ENSUPAG00010020856	ATP5IF1 (ENSUPAG00010020850) #18	SESN2 (ENSUPAG00010020839) #19	ENSUPAG00010020838	MED18 (ENSUPAG00010020827) #20	PHACTR4 (ENSUPAG00010020803) #21	RCC1 (ENSUPAG00010020770) #22	TRNAU1AP (ENSUPAG00010020750) #24	RAB42 (ENSUPAG00010020728) #23	ENSUPAG00010020706 #25	GMEB1 (ENSUPAG00010020697) #26	YTHDF2 (ENSUPAG00010020684) #27	OPRD1 (ENSUPAG00010020681) #28	EPB41 (ENSUPAG00010019935) #29	TMEM200B (ENSUPAG00010019926)	SRSF4 (ENSUPAG00010019922) #30	MECR (ENSUPAG00010019905) #31	PTPRU (ENSUPAG00010019842) #32	MATN1 (ENSUPAG00010019827) #33	LAPTM5 (ENSUPAG00010019820)	SDC3 (ENSUPAG00010019810) #34	PUM1 (ENSUPAG00010019620) #35
Squirrel	MODERN SPECIES	74	FGR (ENSSTOG00000026717) #7	FAM76A (ENSSTOG00000004331) #8	STX12 (ENSSTOG00000019943) #9	PPP1R8 (ENSSTOG00000004381) #10	THEMIS2 (ENSSTOG00000034218) #11	RPA2 (ENSSTOG00000004433) #12	SMPDL3B (ENSSTOG00000004468) #13	XKR8 (ENSSTOG00000023254) #14	EYA3 (ENSSTOG00000004478) #15	PTAFR (ENSSTOG00000015934) #16	DNAJC8 (ENSSTOG00000012834) #17	ATP5IF1 (ENSSTOG00000020766) #18	SESN2 (ENSSTOG00000009293) #19	MED18 (ENSSTOG00000020723) #20	PHACTR4 (ENSSTOG00000006463) #21	RCC1 (ENSSTOG00000012131) #22	TRNAU1AP (ENSSTOG00000000079) #24	RAB42 (ENSSTOG00000000084) #23	TAF12 (ENSSTOG00000000086) #25	GMEB1 (ENSSTOG00000000088) #26	YTHDF2 (ENSSTOG00000025075) #27	OPRD1 (ENSSTOG00000011943) #28	EPB41 (ENSSTOG00000032103) #29	TMEM200B (ENSSTOG00000034064)	SRSF4 (ENSSTOG00000015908) #30	MECR (ENSSTOG00000026575) #31	PTPRU (ENSSTOG00000015915) #32	MATN1 (ENSSTOG00000014709) #33	LAPTM5 (ENSSTOG00000021660)	SDC3 (ENSSTOG00000027125) #34	PUM1 (ENSSTOG00000010757) #35
Alpin marmot	MODERN SPECIES	15	FAM76A (ENSMMMG00000013430) #8	STX12 (ENSMMMG00000013420) #9	ENSMMMG00000013416	PPP1R8 (ENSMMMG00000013396) #10	THEMIS2 (ENSMMMG00000013395) #11	RPA2 (ENSMMMG00000013382) #12	SMPDL3B (ENSMMMG00000013366) #13	XKR8 (ENSMMMG00000013348) #14	EYA3 (ENSMMMG00000013195) #15	PTAFR (ENSMMMG00000013184) #16	DNAJC8 (ENSMMMG00000013133) #17	ATP5IF1 (ENSMMMG00000013117) #18	SESN2 (ENSMMMG00000013099) #19	MED18 (ENSMMMG00000013084) #20	PHACTR4 (ENSMMMG00000013031) #21	RCC1 (ENSMMMG00000012973) #22	TRNAU1AP (ENSMMMG00000012958) #24	RAB42 (ENSMMMG00000012933) #23	TAF12 (ENSMMMG00000012915) #25	GMEB1 (ENSMMMG00000012888) #26	YTHDF2 (ENSMMMG00000012863) #27	OPRD1 (ENSMMMG00000012823) #28	EPB41 (ENSMMMG00000011984) #29	TMEM200B (ENSMMMG00000011965)	SRSF4 (ENSMMMG00000011951) #30	MECR (ENSMMMG00000011938) #31	PTPRU (ENSMMMG00000011811) #32	LAPTM5 (ENSMMMG00000011800)	SDC3 (ENSMMMG00000011746) #34	PUM1 (ENSMMMG00000011433) #35	NKAIN1 (ENSMMMG00000011409) #36
Eurasian red squirrel	MODERN SPECIES		STX12 (ENSSVLG00005010643) #9	PPP1R8 (ENSSVLG00005010667) #10	THEMIS2 (ENSSVLG00005010773) #11	RPA2 (ENSSVLG00005010920) #12	SMPDL3B (ENSSVLG00005011082) #13	XKR8 (ENSSVLG00005011375) #14	ENSSVLG00005011412	EYA3 (ENSSVLG00005011513) #15	PTAFR (ENSSVLG00005011699) #16	DNAJC8 (ENSSVLG00005011722) #17	ATP5IF1 (ENSSVLG00005011758) #18	SESN2 (ENSSVLG00005011840) #19	MED18 (ENSSVLG00005011896) #20	ENSSVLG00005011930	PHACTR4 (ENSSVLG00005011991) #21	RCC1 (ENSSVLG00005012359) #22	TRNAU1AP (ENSSVLG00005012466) #24	RAB42 (ENSSVLG00005012595) #23	ENSSVLG00005012624 #25	GMEB1 (ENSSVLG00005012698) #26	YTHDF2 (ENSSVLG00005012853) #27	ENSSVLG00005012949	OPRD1 (ENSSVLG00005012967) #28	EPB41 (ENSSVLG00005014395) #29	TMEM200B (ENSSVLG00005016580)	SRSF4 (ENSSVLG00005016599) #30	MECR (ENSSVLG00005016630) #31	PTPRU (ENSSVLG00005016704) #32	MATN1 (ENSSVLG00005016798) #33	LAPTM5 (ENSSVLG00005016884)	SDC3 (ENSSVLG00005016980) #34
Hystricomorpha	ANCESTRAL SPECIES	4	ENSGT00940000157554 #7	ENSGT00940000160073 #8	ENSGT01000000214440.A.a.b.a #9	ENSGT00940000156115 #10	ENSGT00530000063770.c.a #11	ENSGT00390000010045 #12	ENSGT00950000183182.a.a #13	ENSGT01090000260093.b #14	ENSGT00950000182978.B #15	ENSGT01060000248589.D #16	ENSGT00390000012569.a #17	ENSGT00390000006264 #18	ENSGT00950000183168.B.a #19	ENSGT00390000003312 #20	ENSGT00940000157582 #21	ENSGT00940000155543 #22	ENSGT00940000156139 #24	ENSGT00940000162094 #23	ENSGT00390000002144 #25	ENSGT00410000025596.a.b #26	ENSGT00940000156761.j #27	ENSGT00940000157669 #28	ENSGT00940000157833 #29	ENSGT00530000063698.b	ENSGT00940000156213 #30	ENSGT00940000156592 #31	ENSGT00940000157151 #32	ENSGT00940000159638 #33	ENSGT00940000153446.a.b	ENSGT00940000160209 #34	ENSGT00940000158079 #35
Hystricomorpha_a	ANCESTRAL SPECIES	1	ENSGT00940000157554 #7	ENSGT00940000160073 #8	ENSGT01000000214440.A.a.b.a #9	ENSGT00940000156115 #10	ENSGT00530000063770.c.a #11	ENSGT00390000010045 #12	ENSGT00950000183182.a.a #13	ENSGT01090000260093.b #14	ENSGT00950000182978.B #15	ENSGT01060000248589.D #16	ENSGT00390000012569.a #17	ENSGT00390000006264 #18	ENSGT00950000183168.B.a #19	ENSGT00390000003312 #20	ENSGT00940000157582 #21	ENSGT00940000155543 #22	ENSGT00940000156139 #24	ENSGT00940000162094 #23	ENSGT00390000002144 #25	ENSGT00410000025596.a.b #26	ENSGT00940000156761.j #27	ENSGT00940000157669 #28	ENSGT00940000157833 #29	ENSGT00530000063698.b	ENSGT00940000156213 #30	ENSGT00940000156592 #31	ENSGT00940000157151 #32	ENSGT00940000159638 #33	ENSGT00940000153446.a.b	ENSGT00940000160209 #34	ENSGT00940000158079 #35
Hystricomorpha_b	ANCESTRAL SPECIES	7	ENSGT00940000157554 #7	ENSGT00940000160073 #8	ENSGT01000000214440.A.a.b.a #9	ENSGT00940000156115 #10	ENSGT00530000063770.c.a #11	ENSGT00390000010045 #12	ENSGT00950000183182.a.a #13	ENSGT01090000260093.b #14	ENSGT00950000182978.B #15	ENSGT01060000248589.D #16	ENSGT00390000012569.a #17	ENSGT00390000006264 #18	ENSGT00950000183168.B.a #19	ENSGT00390000003312 #20	ENSGT00940000157582 #21	ENSGT00940000155543 #22	ENSGT00940000156139 #24	ENSGT00940000162094 #23	ENSGT00390000002144 #25	ENSGT00410000025596.a.b #26	ENSGT00940000156761.j #27	ENSGT00940000157669 #28	ENSGT00940000157833 #29	ENSGT00530000063698.b	ENSGT00940000156213 #30	ENSGT00940000156592 #31	ENSGT00940000157151 #32	ENSGT00940000159638 #33	ENSGT00940000153446.a.b	ENSGT00940000160209 #34	ENSGT00940000158079 #35
Long-tailed chinchilla	MODERN SPECIES	159	FGR (ENSCLAG00000014147) #7	FAM76A (ENSCLAG00000008844) #8	STX12 (ENSCLAG00000013795) #9	PPP1R8 (ENSCLAG00000011211) #10	THEMIS2 (ENSCLAG00000012140) #11	RPA2 (ENSCLAG00000010772) #12	SMPDL3B (ENSCLAG00000011768) #13	XKR8 (ENSCLAG00000011287) #14	EYA3 (ENSCLAG00000008901) #15	PTAFR (ENSCLAG00000017842) #16	DNAJC8 (ENSCLAG00000007390) #17	ATP5IF1 (ENSCLAG00000014624) #18	SESN2 (ENSCLAG00000011979) #19	MED18 (ENSCLAG00000015343) #20	PHACTR4 (ENSCLAG00000016145) #21	RCC1 (ENSCLAG00000008107) #22	TRNAU1AP (ENSCLAG00000008223) #24	RAB42 (ENSCLAG00000010175) #23	TAF12 (ENSCLAG00000007187) #25	GMEB1 (ENSCLAG00000006804) #26	YTHDF2 (ENSCLAG00000007438) #27	OPRD1 (ENSCLAG00000010788) #28	EPB41 (ENSCLAG00000008568) #29	SRSF4 (ENSCLAG00000009008) #30	ENSCLAG00000017721	MECR (ENSCLAG00000010792) #31	PTPRU (ENSCLAG00000014778) #32	MATN1 (ENSCLAG00000008049) #33	LAPTM5 (ENSCLAG00000009573)	SDC3 (ENSCLAG00000010987) #34	PUM1 (ENSCLAG00000007662) #35
Degu	MODERN SPECIES	204	PPP1R8 (ENSODEG00000004352) #10	ENSODEG00000004373	THEMIS2 (ENSODEG00000004403) #11	ENSODEG00000004443 #12	ENSODEG00000003467 #13	XKR8 (ENSODEG00000003481) #14	EYA3 (ENSODEG00000003507) #15	PTAFR (ENSODEG00000018990) #16	ENSODEG00000003721 #17	ATP5IF1 (ENSODEG00000003747) #18	SESN2 (ENSODEG00000003769) #19	MED18 (ENSODEG00000003791) #20	ENSODEG00000003828	ENSODEG00000018954	PHACTR4 (ENSODEG00000003857) #21	RCC1 (ENSODEG00000003970) #22	TRNAU1AP (ENSODEG00000002970) #24	RAB42 (ENSODEG00000003021) #23	ENSODEG00000003043 #25	GMEB1 (ENSODEG00000003092) #26	ENSODEG00000003103 #27	OPRD1 (ENSODEG00000003121) #28	ENSODEG00000018881	ENSODEG00000018892	ENSODEG00000003178	ENSODEG00000003196 #29	TMEM200B (ENSODEG00000003209)	SRSF4 (ENSODEG00000003230) #30	MECR (ENSODEG00000003260) #31	PTPRU (ENSODEG00000003405) #32	MATN1 (ENSODEG00000003275) #33
Guinea pig	MODERN SPECIES	25	ENSCPOG00000031828	FAM76A (ENSCPOG00000006186) #8	STX12 (ENSCPOG00000013160) #9	PPP1R8 (ENSCPOG00000036078) #10	THEMIS2 (ENSCPOG00000033796) #11	RPA2 (ENSCPOG00000008766) #12	SMPDL3B (ENSCPOG00000008773) #13	ENSCPOG00000033302	EYA3 (ENSCPOG00000012512) #15	PTAFR (ENSCPOG00000031748) #16	DNAJC8 (ENSCPOG00000014652) #17	ATP5IF1 (ENSCPOG00000030836) #18	SESN2 (ENSCPOG00000000236) #19	MED18 (ENSCPOG00000038084) #20	PHACTR4 (ENSCPOG00000003219) #21	RCC1 (ENSCPOG00000010069) #22	TRNAU1AP (ENSCPOG00000001925) #24	RAB42 (ENSCPOG00000037627) #23	TAF12 (ENSCPOG00000009044) #25	GMEB1 (ENSCPOG00000032204) #26	YTHDF2 (ENSCPOG00000019907) #27	OPRD1 (ENSCPOG00000039511) #28	EPB41 (ENSCPOG00000007254) #29	TMEM200B (ENSCPOG00000020258)	SRSF4 (ENSCPOG00000036234) #30	MECR (ENSCPOG00000037475) #31	PTPRU (ENSCPOG00000000424) #32	ENSCPOG00000001380	MATN1 (ENSCPOG00000010146) #33	LAPTM5 (ENSCPOG00000007128)	SDC3 (ENSCPOG00000022452) #34
Naked mole-rat female	MODERN SPECIES	26	FAM76A (ENSHGLG00000009747) #8	ENSHGLG00000014326 #10	THEMIS2 (ENSHGLG00000019146) #11	RPA2 (ENSHGLG00000018528) #12	SMPDL3B (ENSHGLG00000012112) #13	XKR8 (ENSHGLG00000012712) #14	ENSHGLG00000046470	EYA3 (ENSHGLG00000018515) #15	ENSHGLG00000032519	PTAFR (ENSHGLG00000048424) #16	DNAJC8 (ENSHGLG00000011449) #17	ENSHGLG00000050011 #18	SESN2 (ENSHGLG00000011617) #19	MED18 (ENSHGLG00000049561) #20	PHACTR4 (ENSHGLG00000012380) #21	RCC1 (ENSHGLG00000010563) #22	ENSHGLG00000010380 #24	ENSHGLG00000032594 #24	RAB42 (ENSHGLG00000010181) #23	ENSHGLG00000049224 #25	GMEB1 (ENSHGLG00000012929) #26	ENSHGLG00000009933 #27	OPRD1 (ENSHGLG00000011866) #28	EPB41 (ENSHGLG00000012118) #29	TMEM200B (ENSHGLG00000049796)	SRSF4 (ENSHGLG00000011842) #30	MECR (ENSHGLG00000012855) #31	ENSHGLG00000014761 #32	ENSHGLG00000045877	ENSHGLG00000034685	ENSHGLG00000040884
Lagomorpha	ANCESTRAL SPECIES	21	ENSGT00950000182962.b.a	ENSGT00390000018883	ENSGT00940000157554 #7	ENSGT00940000160073 #8	ENSGT00940000156115 #10	ENSGT00530000063770.c.a #11	ENSGT00390000010045 #12	ENSGT00950000183182.a.a #13	ENSGT01090000260093.b #14	ENSGT00950000182978.B #15	ENSGT01060000248589.D #16	ENSGT00940000164617	ENSGT00390000006264 #18	ENSGT00950000183168.B.a #19	ENSGT00940000157582 #21	ENSGT00940000155543 #22	ENSGT00940000156139 #24	ENSGT00940000162094 #23	ENSGT00390000002144 #25	ENSGT00410000025596.a.b #26	ENSGT00940000156761 #27	ENSGT00940000157669 #28	ENSGT00940000157833 #29	ENSGT00530000063698.b	ENSGT00940000156213 #30	ENSGT00940000156592 #31	ENSGT00940000157151 #32	ENSGT00940000159638 #33	ENSGT00940000153446.a.b	ENSGT00940000160209 #34	ENSGT00940000158079 #35
Rabbit	DUPLICATION
Rabbit	MODERN SPECIES	4	SYTL1 (ENSOCUG00000002371)	MAP3K6 (ENSOCUG00000002379)	ENSOCUG00000007587	GPR3 (ENSOCUG00000027272)	WASF2 (ENSOCUG00000002394)	AHDC1 (ENSOCUG00000008914)	FGR (ENSOCUG00000008922) #7	FAM76A (ENSOCUG00000014830) #8	PPP1R8 (ENSOCUG00000013594) #10	SMPDL3B (ENSOCUG00000012589) #13	EYA3 (ENSOCUG00000008020) #15	PTAFR (ENSOCUG00000017831) #16	ENSOCUG00000017932 #18	SESN2 (ENSOCUG00000014896) #19	PHACTR4 (ENSOCUG00000027528) #21	ENSOCUG00000002346 #22	ENSOCUG00000002353	RAB42 (ENSOCUG00000003933) #23	TAF12 (ENSOCUG00000003935) #25	GMEB1 (ENSOCUG00000010893) #26	YTHDF2 (ENSOCUG00000010612) #27	OPRD1 (ENSOCUG00000001033) #28	ENSOCUG00000030120	EPB41 (ENSOCUG00000006641) #29	TMEM200B (ENSOCUG00000025757)	SRSF4 (ENSOCUG00000001837) #30	MECR (ENSOCUG00000012645) #31	PTPRU (ENSOCUG00000012661) #32	MATN1 (ENSOCUG00000008153) #33	SDC3 (ENSOCUG00000006838) #34	PUM1 (ENSOCUG00000008641) #35
Rabbit	MODERN SPECIES	19	ENSOCUG00000039664	ENSOCUG00000014903	ENSOCUG00000021190	ENSOCUG00000032894	NAA16 (ENSOCUG00000013024)	MTRF1 (ENSOCUG00000025207)	ENSOCUG00000014016	WBP4 (ENSOCUG00000004256)	ELF1 (ENSOCUG00000010580)	ENSOCUG00000036807	CNMD (ENSOCUG00000005852)	PCDH8 (ENSOCUG00000008197)	ENSOCUG00000034427	ENSOCUG00000006349	ENSOCUG00000026932	ENSOCUG00000023238 #22	ENSOCUG00000024464	PCDH17 (ENSOCUG00000005237)	ENSOCUG00000037923	DIAPH3 (ENSOCUG00000001719)	TDRD3 (ENSOCUG00000014261)	ENSOCUG00000030963	PCDH20 (ENSOCUG00000016877)	ENSOCUG00000022627	PCDH9 (ENSOCUG00000000774)	ENSOCUG00000024260	ENSOCUG00000030652	KLHL1 (ENSOCUG00000015164)	DACH1 (ENSOCUG00000002140)	MZT1 (ENSOCUG00000006654)	BORA (ENSOCUG00000006658)
Pika	MODERN SPECIES	639																RCC1 (ENSOPRG00000007072) #22	ENSOPRG00000007084 #24	ENSOPRG00000007095
Tree shrew	MODERN SPECIES	4275																ENSTBEG00000006787 #22
Primates	ANCESTRAL SPECIES	4	ENSGT00940000163178	ENSGT00940000160073 #8	ENSGT01000000214440.A.a.b.a #9	ENSGT00940000156115 #10	ENSGT00530000063770.c.a #11	ENSGT00390000010045 #12	ENSGT00950000183182.a.a #13	ENSGT01090000260093.b #14	ENSGT00950000182978.B #15	ENSGT01060000248589.D #16	ENSGT00390000012569.a #17	ENSGT00390000006264 #18	ENSGT00950000183168.B.a #19	ENSGT00390000003312 #20	ENSGT00940000157582 #21	ENSGT00940000155543 #22	ENSGT00940000156139 #24	ENSGT00940000162094 #23	ENSGT00940000164873	ENSGT00390000002144 #25	ENSGT00410000025596.a.b #26	ENSGT00940000156761 #27	ENSGT00940000157669 #28	ENSGT00940000157833 #29	ENSGT00530000063698.b	ENSGT00940000156213 #30	ENSGT00940000156592 #31	ENSGT00940000157151 #32	ENSGT00940000159638 #33	ENSGT00940000153446.a.b	ENSGT00940000160209 #34
Strepsirrhini	ANCESTRAL SPECIES		ENSGT00940000163178	ENSGT00940000160073 #8	ENSGT01000000214440.A.a.b.a #9	ENSGT00940000156115 #10	ENSGT00530000063770.c.a #11	ENSGT00390000010045 #12	ENSGT00950000183182.a.a #13	ENSGT01090000260093.b #14	ENSGT00950000182978.B #15	ENSGT01060000248589.D #16	ENSGT00390000012569.a #17	ENSGT00390000006264 #18	ENSGT00950000183168.B.a #19	ENSGT00390000003312 #20	ENSGT00940000157582 #21	ENSGT00940000155543 #22	ENSGT00940000156139 #24	ENSGT00940000162094 #23	ENSGT00940000164873	ENSGT00390000002144 #25	ENSGT00410000025596.a.b #26	ENSGT00940000156761 #27	ENSGT00940000157669 #28	ENSGT00940000157833 #29	ENSGT00530000063698.b	ENSGT00940000156213 #30	ENSGT00940000156592 #31	ENSGT00940000157151 #32	ENSGT00940000159638 #33	ENSGT00940000153446.a.b	ENSGT00940000160209 #34
Lemuriformes	ANCESTRAL SPECIES		ENSGT00940000163178	ENSGT00940000160073 #8	ENSGT01000000214440.A.a.b.a #9	ENSGT00940000156115 #10	ENSGT00530000063770.c.a #11	ENSGT00390000010045 #12	ENSGT00950000183182.a.a #13	ENSGT01090000260093.b #14	ENSGT00950000182978.B #15	ENSGT01060000248589.D #16	ENSGT00390000012569.a.`b #17	ENSGT00390000006264 #18	ENSGT00950000183168.B.a #19	ENSGT00390000003312 #20	ENSGT00940000157582 #21	ENSGT00940000155543 #22	ENSGT00940000156139 #24	ENSGT00940000162094 #23	ENSGT00940000164873	ENSGT00390000002144 #25	ENSGT00410000025596.a.b #26	ENSGT00940000156761 #27	ENSGT00940000157669 #28	ENSGT00940000157833 #29	ENSGT00530000063698.b	ENSGT00940000156213 #30	ENSGT00940000156592 #31	ENSGT00940000157151 #32	ENSGT00940000159638 #33	ENSGT00940000153446.a.b	ENSGT00940000160209 #34
Lemuriformes_a	ANCESTRAL SPECIES	7	ENSGT00940000163178	ENSGT00940000160073 #8	ENSGT01000000214440.A.a.b.a #9	ENSGT00940000156115 #10	ENSGT00530000063770.c.a #11	ENSGT00390000010045 #12	ENSGT00950000183182.a.a #13	ENSGT01090000260093.b #14	ENSGT00950000182978.B #15	ENSGT01060000248589.D #16	ENSGT00390000012569.a.`b #17	ENSGT00390000006264 #18	ENSGT00950000183168.B.a #19	ENSGT00390000003312 #20	ENSGT00940000157582 #21	ENSGT00940000155543 #22	ENSGT00940000156139 #24	ENSGT00940000162094 #23	ENSGT00940000164873	ENSGT00390000002144 #25	ENSGT00410000025596.a.b #26	ENSGT00940000156761 #27	ENSGT00940000157669 #28	ENSGT00940000157833 #29	ENSGT00530000063698.b	ENSGT00940000156213 #30	ENSGT00940000156592 #31	ENSGT00940000157151 #32
Coquerels sifaka	MODERN SPECIES	344	AHDC1 (ENSPCOG00000012355)	FGR (ENSPCOG00000021101) #7	IFI6 (ENSPCOG00000019541)	FAM76A (ENSPCOG00000017956) #8	STX12 (ENSPCOG00000014712) #9	PPP1R8 (ENSPCOG00000013455) #10	THEMIS2 (ENSPCOG00000002667) #11	RPA2 (ENSPCOG00000023673) #12	SMPDL3B (ENSPCOG00000026165) #13	XKR8 (ENSPCOG00000009916) #14	EYA3 (ENSPCOG00000009524) #15	ATP5IF1 (ENSPCOG00000028473) #18	SESN2 (ENSPCOG00000023322) #19	MED18 (ENSPCOG00000022541) #20	PHACTR4 (ENSPCOG00000015433) #21	RCC1 (ENSPCOG00000015509) #22	ENSPCOG00000027712 #24	RAB42 (ENSPCOG00000008605) #23	TAF12 (ENSPCOG00000017974) #25	GMEB1 (ENSPCOG00000028438) #26	YTHDF2 (ENSPCOG00000010131) #27	ENSPCOG00000020601	OPRD1 (ENSPCOG00000018592) #28	EPB41 (ENSPCOG00000021118) #29	SRSF4 (ENSPCOG00000027341) #30	MECR (ENSPCOG00000018330) #31	PTPRU (ENSPCOG00000025974) #32
Greater bamboo lemur	MODERN SPECIES	122							SMPDL3B (ENSPSMG00000010811) #13	XKR8 (ENSPSMG00000010782) #14	EYA3 (ENSPSMG00000010772) #15	PTAFR (ENSPSMG00000010713) #16	DNAJC8 (ENSPSMG00000010707) #17	ATP5IF1 (ENSPSMG00000010696) #18	SESN2 (ENSPSMG00000010685) #19	MED18 (ENSPSMG00000010662) #20	PHACTR4 (ENSPSMG00000010641) #21	RCC1 (ENSPSMG00000010510) #22	TRNAU1AP (ENSPSMG00000010448) #24	RAB42 (ENSPSMG00000010409) #23	ENSPSMG00000010403	TAF12 (ENSPSMG00000010398) #25	GMEB1 (ENSPSMG00000010381) #26	ENSPSMG00000010343	YTHDF2 (ENSPSMG00000010340) #27	OPRD1 (ENSPSMG00000010321) #28	EPB41 (ENSPSMG00000009246) #29	TMEM200B (ENSPSMG00000008276)	SRSF4 (ENSPSMG00000008263) #30	MECR (ENSPSMG00000008225) #31	PTPRU (ENSPSMG00000008032) #32
Mouse lemur	MODERN SPECIES	11	ENSMICG00000011066 #9	PPP1R8 (ENSMICG00000043807) #10	ENSMICG00000036349	THEMIS2 (ENSMICG00000011084) #11	RPA2 (ENSMICG00000042716) #12	SMPDL3B (ENSMICG00000011091) #13	XKR8 (ENSMICG00000047287) #14	EYA3 (ENSMICG00000011109) #15	PTAFR (ENSMICG00000047486) #16	ENSMICG00000001222 #17	ATP5IF1 (ENSMICG00000001227) #18	ENSMICG00000035317	SESN2 (ENSMICG00000037742) #19	MED18 (ENSMICG00000006508) #20	PHACTR4 (ENSMICG00000037236) #21	RCC1 (ENSMICG00000047487) #22	TRNAU1AP (ENSMICG00000008386) #24	RAB42 (ENSMICG00000029915) #23	TAF12 (ENSMICG00000033777) #25	GMEB1 (ENSMICG00000046821) #26	YTHDF2 (ENSMICG00000003729) #27	OPRD1 (ENSMICG00000003731) #28	ENSMICG00000027839 #29	SRSF4 (ENSMICG00000043567) #30	MECR (ENSMICG00000008974) #31	PTPRU (ENSMICG00000008985) #32	MATN1 (ENSMICG00000011541) #33	LAPTM5 (ENSMICG00000011554)	SDC3 (ENSMICG00000034678) #34	ENSMICG00000007713 #35	NKAIN1 (ENSMICG00000009329) #36
Bushbaby	MODERN SPECIES	299															PHACTR4 (ENSOGAG00000015245) #21	RCC1 (ENSOGAG00000007487) #22	RAB42 (ENSOGAG00000006951) #23	TAF12 (ENSOGAG00000026358) #25	TRNAU1AP (ENSOGAG00000002274) #24	GMEB1 (ENSOGAG00000006956) #26	YTHDF2 (ENSOGAG00000014648) #27	OPRD1 (ENSOGAG00000025601) #28	ENSOGAG00000025718	EPB41 (ENSOGAG00000001603) #29	TMEM200B (ENSOGAG00000025912)	SRSF4 (ENSOGAG00000015515) #30	MECR (ENSOGAG00000015520) #31	PTPRU (ENSOGAG00000015523) #32	MATN1 (ENSOGAG00000014950) #33	LAPTM5 (ENSOGAG00000014958)	ENSOGAG00000033118
Haplorrhini	ANCESTRAL SPECIES	1	ENSGT00940000163178	ENSGT00940000160073 #8	ENSGT01000000214440.A.a.b.a #9	ENSGT00940000156115 #10	ENSGT00530000063770.c.a #11	ENSGT00390000010045 #12	ENSGT00950000183182.a.a #13	ENSGT01090000260093.b #14	ENSGT00950000182978.B #15	ENSGT01060000248589.D #16	ENSGT00390000012569.a #17	ENSGT00390000006264 #18	ENSGT00950000183168.B.a #19	ENSGT00390000003312 #20	ENSGT00940000157582 #21	ENSGT00940000155543 #22	ENSGT00940000156139 #24	ENSGT00940000162094 #23	ENSGT00390000002144 #25	ENSGT00410000025596.a.b #26	ENSGT00940000156761 #27	ENSGT00940000157669 #28	ENSGT00940000157833 #29	ENSGT00530000063698.b	ENSGT00940000156213 #30	ENSGT00940000156592 #31	ENSGT00940000157151 #32	ENSGT00940000159638 #33	ENSGT00940000153446.a.b	ENSGT00940000160209 #34	ENSGT00940000158079 #35
Tarsier	MODERN SPECIES	6004												GRK6 (ENSTSYG00000035570)	ENSTSYG00000028949	MED18 (ENSTSYG00000036419) #20	PHACTR4 (ENSTSYG00000010639) #21	RCC1 (ENSTSYG00000012633) #22	TRNAU1AP (ENSTSYG00000003506) #24
Simiiformes	ANCESTRAL SPECIES	3	ENSGT00940000160073 #8	ENSGT01000000214440.A.a.b.a #9	ENSGT00940000156115 #10	ENSGT00530000063770.c.a #11	ENSGT00390000010045.g.b #12	ENSGT00950000183182.a.a #13	ENSGT01090000260093.b #14	ENSGT00950000182978.B #15	ENSGT01060000248589.D #16	ENSGT00390000012569.a.fb.b.a #17	ENSGT00390000012569.a.fb.b.b.a #17	ENSGT00390000006264 #18	ENSGT00950000183168.B.a #19	ENSGT00390000003312 #20	ENSGT00940000157582 #21	ENSGT00940000155543 #22	ENSGT00940000156139 #24	ENSGT00940000162094 #23	ENSGT00390000002144 #25	ENSGT00410000025596.a.b #26	ENSGT00940000156761 #27	ENSGT00940000157669 #28	ENSGT00940000157833 #29	ENSGT00530000063698.b	ENSGT00940000156213 #30	ENSGT00940000156592 #31	ENSGT00940000157151 #32	ENSGT00940000159638 #33	ENSGT00940000153446.a.b	ENSGT00940000160209 #34	ENSGT00910000147267
Platyrrhini	DUPLICATION
Platyrrhini	ANCESTRAL SPECIES		ENSGT00940000160073 #8	ENSGT01000000214440.A.a.b.a #9	ENSGT00940000156115 #10	ENSGT00530000063770.c.a #11	ENSGT00390000010045.g.b.a #12	ENSGT00950000183182.a.a #13	ENSGT01090000260093.b #14	ENSGT00950000182978.B #15	ENSGT01060000248589.D #16	ENSGT00390000015229.p	ENSGT00390000012569.a.fb.a.b.a #17	ENSGT00390000006264 #18	ENSGT00950000183168.B.a #19	ENSGT00390000003312 #20	ENSGT00940000157582 #21	ENSGT00940000155543.e #22	ENSGT00940000155543.f #22	ENSGT00940000156139 #24	ENSGT00940000162094 #23	ENSGT00390000002144 #25	ENSGT00410000025596.a.b #26	ENSGT00940000156761 #27	ENSGT00940000157669 #28	ENSGT00940000157833 #29	ENSGT00530000063698.b	ENSGT00940000156213 #30	ENSGT00940000156592 #31	ENSGT00940000157151 #32	ENSGT00940000159638 #33	ENSGT00940000153446.a.b	ENSGT00940000160209 #34
Cebidae	ANCESTRAL SPECIES	1	ENSGT00940000160073 #8	ENSGT01000000214440.A.a.b.a #9	ENSGT00940000156115 #10	ENSGT00530000063770.c.a #11	ENSGT00390000010045.g.b.a #12	ENSGT00950000183182.a.a #13	ENSGT01090000260093.b #14	ENSGT00950000182978.B #15	ENSGT01060000248589.D #16	ENSGT00390000015229.p	ENSGT00390000012569.a.fb.a.b.a #17	ENSGT00390000006264 #18	ENSGT00950000183168.B.a #19	ENSGT00390000003312 #20	ENSGT00940000157582 #21	ENSGT00940000155543.e #22	ENSGT00940000155543.f #22	ENSGT00940000156139 #24	ENSGT00940000162094 #23	ENSGT00390000002144 #25	ENSGT00410000025596.a.b #26	ENSGT00940000156761 #27	ENSGT00940000157669 #28	ENSGT00940000157833 #29	ENSGT00940000156213 #30	ENSGT00940000156592 #31	ENSGT00940000157151 #32	ENSGT00940000159638 #33	ENSGT00940000153446.a.b	ENSGT00940000160209 #34	ENSGT00910000147267
Cebidae_a	DUPLICATION
Cebidae_a	ANCESTRAL SPECIES																	ENSGT00940000155543.e.a #22
Capuchin	MODERN SPECIES	873																ENSCCAG00000036649 #22	ENSCCAG00000027335	SMPD4 (ENSCCAG00000003676)	ENSCCAG00000024585	TUBA3C (ENSCCAG00000026833)
Bolivian squirrel monkey	MODERN SPECIES	322																ENSSBOG00000029433 #22	ENSSBOG00000032232
Cebidae_a	ANCESTRAL SPECIES																	ENSGT00940000155543.e.b #22
Bolivian squirrel monkey	MODERN SPECIES	59	ATRIP (ENSSBOG00000019674)	TMA7 (ENSSBOG00000025835)	CCDC51 (ENSSBOG00000034836)	PLXNB1 (ENSSBOG00000020914)	FBXW12 (ENSSBOG00000023701)	SPINK8 (ENSSBOG00000027866)	NME6 (ENSSBOG00000021349)	ENSSBOG00000028662	CAMP (ENSSBOG00000034385)	CDC25A (ENSSBOG00000025104)	MAP4 (ENSSBOG00000033564)	DHX30 (ENSSBOG00000035810)	ENSSBOG00000020538	SMARCC1 (ENSSBOG00000034716)	CSPG5 (ENSSBOG00000030429)	ENSSBOG00000034659 #22	ELP6 (ENSSBOG00000009153)	SCAP (ENSSBOG00000027955)	PTPN23 (ENSSBOG00000003424)	KLHL18 (ENSSBOG00000027931)	KIF9 (ENSSBOG00000035834)	ENSSBOG00000009349	SETD2 (ENSSBOG00000018044)	NBEAL2 (ENSSBOG00000032401)	CCDC12 (ENSSBOG00000035443)	PTH1R (ENSSBOG00000025002)	MYL3 (ENSSBOG00000030319)	ENSSBOG00000028992	ENSSBOG00000024974	ENSSBOG00000028894	PRSS50 (ENSSBOG00000031754)
Marmoset	MODERN SPECIES	19	ENSCJAG00000077742	STX12 (ENSCJAG00000009378) #9	PPP1R8 (ENSCJAG00000009406) #10	ENSCJAG00000009445 #11	RPA2 (ENSCJAG00000009473) #12	SMPDL3B (ENSCJAG00000009490) #13	XKR8 (ENSCJAG00000009496) #14	EYA3 (ENSCJAG00000009498) #15	PTAFR (ENSCJAG00000022642) #16	ENSCJAG00000009556 #17	ATP5IF1 (ENSCJAG00000048007) #18	SESN2 (ENSCJAG00000009602) #19	MED18 (ENSCJAG00000068482) #20	PHACTR4 (ENSCJAG00000009642) #21	ENSCJAG00000062507	RCC1 (ENSCJAG00000009686) #22	TRNAU1AP (ENSCJAG00000009717) #24	RAB42 (ENSCJAG00000009733) #23	TAF12 (ENSCJAG00000009742) #25	GMEB1 (ENSCJAG00000009754) #26	YTHDF2 (ENSCJAG00000009804) #27	OPRD1 (ENSCJAG00000009824) #28	EPB41 (ENSCJAG00000009831) #29	SRSF4 (ENSCJAG00000047192) #30	MECR (ENSCJAG00000009994) #31	PTPRU (ENSCJAG00000010031) #32	MATN1 (ENSCJAG00000005964) #33	LAPTM5 (ENSCJAG00000062185)	SDC3 (ENSCJAG00000085360) #34	ENSCJAG00000073130	PUM1 (ENSCJAG00000006035) #35
Mas night monkey	MODERN SPECIES	776	ENSANAG00000037952	MIOS (ENSANAG00000031901)	RPA3 (ENSANAG00000021050)	UMAD1 (ENSANAG00000035021)	GLCCI1 (ENSANAG00000022639)	ICA1 (ENSANAG00000037411)	NXPH1 (ENSANAG00000021516)	ENSANAG00000038257	PHF14 (ENSANAG00000037061)	THSD7A (ENSANAG00000022340)	TMEM106B (ENSANAG00000018667)	VWDE (ENSANAG00000019499)	ENSANAG00000000032	SCIN (ENSANAG00000029754)	ENSANAG00000031522	ENSANAG00000029590 #22	ENSANAG00000030559	ETV1 (ENSANAG00000036115)	ENSANAG00000022964	DGKB (ENSANAG00000033587)	AGMO (ENSANAG00000029663)	MEOX2 (ENSANAG00000026696)	CRPPA (ENSANAG00000034796)	SOSTDC1 (ENSANAG00000023489)	LRRC72 (ENSANAG00000032108)	ANKMY2 (ENSANAG00000031294)	BZW2 (ENSANAG00000004675)	TSPAN13 (ENSANAG00000032135)	AGR2 (ENSANAG00000034130)	AGR3 (ENSANAG00000035108)	AHR (ENSANAG00000030085)
Platyrrhini	ANCESTRAL SPECIES		ENSGT01000000214440.A.a.b.a #9	ENSGT00940000156115 #10	ENSGT00530000063770.c.a #11	ENSGT00390000010045.g.b.a #12	ENSGT00950000183182.a.a #13	ENSGT01090000260093.b #14	ENSGT00950000182978.B #15	ENSGT01060000248589.D #16	ENSGT00390000015229.p	ENSGT00390000012569.a.fb.a.b.a #17	ENSGT00390000006264 #18	ENSGT00950000183168.B.a #19	ENSGT00390000003312 #20	ENSGT00940000157582 #21	ENSGT00940000155543.e #22	ENSGT00940000155543.f #22	ENSGT00940000156139 #24	ENSGT00940000162094 #23	ENSGT00390000002144 #25	ENSGT00410000025596.a.b #26	ENSGT00940000156761 #27	ENSGT00940000157669 #28	ENSGT00940000157833 #29	ENSGT00530000063698.b	ENSGT00940000156213 #30	ENSGT00940000156592 #31	ENSGT00940000157151 #32	ENSGT00940000159638 #33	ENSGT00940000153446.a.b	ENSGT00940000160209 #34	ENSGT00910000147267
Cebidae	ANCESTRAL SPECIES	1	ENSGT01000000214440.A.a.b.a #9	ENSGT00940000156115 #10	ENSGT00530000063770.c.a #11	ENSGT00390000010045.g.b.a #12	ENSGT00950000183182.a.a #13	ENSGT01090000260093.b #14	ENSGT00950000182978.B #15	ENSGT01060000248589.D #16	ENSGT00390000015229.p	ENSGT00390000012569.a.fb.a.b.a #17	ENSGT00390000006264 #18	ENSGT00950000183168.B.a #19	ENSGT00390000003312 #20	ENSGT00940000157582 #21	ENSGT00940000155543.e #22	ENSGT00940000155543.f #22	ENSGT00940000156139 #24	ENSGT00940000162094 #23	ENSGT00390000002144 #25	ENSGT00410000025596.a.b #26	ENSGT00940000156761 #27	ENSGT00940000157669 #28	ENSGT00940000157833 #29	ENSGT00940000156213 #30	ENSGT00940000156592 #31	ENSGT00940000157151 #32	ENSGT00940000159638 #33	ENSGT00940000153446.a.b	ENSGT00940000160209 #34	ENSGT00910000147267	ENSGT00940000158079 #35
Cebidae_a	ANCESTRAL SPECIES		ENSGT00940000160073 #8	ENSGT01000000214440.A.a.b.a #9	ENSGT00940000156115 #10	ENSGT00530000063770.c.a #11	ENSGT00390000010045.g.b.a #12	ENSGT00950000183182.a.a #13	ENSGT01090000260093.b #14	ENSGT00950000182978.B #15	ENSGT00390000012569.a.fb.a.b.b #17	ENSGT00390000015229.p	ENSGT00390000012569.a.fb.a.b.a #17	ENSGT00390000006264 #18	ENSGT00950000183168.B.a #19	ENSGT00390000003312 #20	ENSGT00940000157582 #21	ENSGT00940000155543.f #22	ENSGT00940000156139 #24	ENSGT00940000162094 #23	ENSGT00390000002144 #25	ENSGT00410000025596.a.b #26	ENSGT00940000156761 #27	ENSGT00940000157669 #28	ENSGT00940000157833 #29	ENSGT00940000156213 #30	ENSGT00940000156592 #31	ENSGT00940000157151 #32	ENSGT00940000159638 #33	ENSGT00940000153446.a.b	ENSGT00940000160209 #34	ENSGT00910000147267	ENSGT00940000158079 #35
Bolivian squirrel monkey	MODERN SPECIES	260					THEMIS2 (ENSSBOG00000027590) #11	ENSSBOG00000021756 #12	SMPDL3B (ENSSBOG00000004435) #13	XKR8 (ENSSBOG00000001611) #14	EYA3 (ENSSBOG00000032353) #15	ENSSBOG00000023608 #17	ATP5IF1 (ENSSBOG00000019841) #18	SESN2 (ENSSBOG00000025091) #19	MED18 (ENSSBOG00000012808) #20	PHACTR4 (ENSSBOG00000028484) #21	ENSSBOG00000027297	ENSSBOG00000001098 #22	ENSSBOG00000024457	TRNAU1AP (ENSSBOG00000021299) #24	ENSSBOG00000010940 #23
Capuchin	MODERN SPECIES	87	FAM76A (ENSCCAG00000032340) #8	ENSCCAG00000031655	STX12 (ENSCCAG00000023253) #9	PPP1R8 (ENSCCAG00000025347) #10	THEMIS2 (ENSCCAG00000035270) #11	RPA2 (ENSCCAG00000025366) #12	SMPDL3B (ENSCCAG00000023858) #13	XKR8 (ENSCCAG00000033700) #14	EYA3 (ENSCCAG00000024843) #15	ENSCCAG00000027313	DNAJC8 (ENSCCAG00000026898) #17	ATP5IF1 (ENSCCAG00000037499) #18	SESN2 (ENSCCAG00000032713) #19	MED18 (ENSCCAG00000015706) #20	PHACTR4 (ENSCCAG00000020309) #21	ENSCCAG00000025966 #22	TRNAU1AP (ENSCCAG00000037506) #24	RAB42 (ENSCCAG00000037497) #23	TAF12 (ENSCCAG00000037353) #25	GMEB1 (ENSCCAG00000005580) #26	YTHDF2 (ENSCCAG00000027370) #27	ENSCCAG00000036720	OPRD1 (ENSCCAG00000032398) #28	EPB41 (ENSCCAG00000036038) #29	SRSF4 (ENSCCAG00000033585) #30	MECR (ENSCCAG00000019564) #31	PTPRU (ENSCCAG00000030417) #32
Mas night monkey	MODERN SPECIES	1281	FAM76A (ENSANAG00000034741) #8	STX12 (ENSANAG00000034764) #9	PPP1R8 (ENSANAG00000011047) #10	THEMIS2 (ENSANAG00000032929) #11	ENSANAG00000033411	SMPDL3B (ENSANAG00000029765) #13	XKR8 (ENSANAG00000020923) #14	EYA3 (ENSANAG00000024390) #15	ENSANAG00000032813	ENSANAG00000033952 #17	ATP5IF1 (ENSANAG00000029390) #18	SESN2 (ENSANAG00000029947) #19	MED18 (ENSANAG00000034771) #20	PHACTR4 (ENSANAG00000035911) #21	ENSANAG00000029446	ENSANAG00000036884 #22	TRNAU1AP (ENSANAG00000018976) #24	RAB42 (ENSANAG00000035487) #23	TAF12 (ENSANAG00000035455) #25	GMEB1 (ENSANAG00000034422) #26	YTHDF2 (ENSANAG00000032408) #27	OPRD1 (ENSANAG00000036570) #28	EPB41 (ENSANAG00000020638) #29	TMEM200B (ENSANAG00000021732)	SRSF4 (ENSANAG00000037134) #30	MECR (ENSANAG00000022014) #31	PTPRU (ENSANAG00000021332) #32	MATN1 (ENSANAG00000001841) #33	LAPTM5 (ENSANAG00000020926)	SDC3 (ENSANAG00000024425) #34	PUM1 (ENSANAG00000027865) #35
Catarrhini	ANCESTRAL SPECIES	3	ENSGT01000000214440.A.a.b.a #9	ENSGT00940000156115 #10	ENSGT00530000063770.c.a #11	ENSGT00390000010045.g.b #12	ENSGT00950000183182.a.a #13	ENSGT01090000260093.b #14	ENSGT00950000182978.B #15	ENSGT00940000154861.d	ENSGT01060000248589.D #16	ENSGT00390000012569.a.fb.b.a #17	ENSGT00390000012569.a.fb.b.b.a #17	ENSGT00390000006264 #18	ENSGT00950000183168.B.a #19	ENSGT00390000003312 #20	ENSGT00940000157582 #21	ENSGT00940000155543 #22	ENSGT00940000156139 #24	ENSGT00940000162094 #23	ENSGT00390000002144 #25	ENSGT00410000025596.a.b #26	ENSGT00940000156761 #27	ENSGT00940000157669 #28	ENSGT00940000157833 #29	ENSGT00530000063698.b	ENSGT00940000156213 #30	ENSGT00940000156592 #31	ENSGT00940000157151 #32	ENSGT00940000159638 #33	ENSGT00940000153446.a.b	ENSGT00940000160209 #34	ENSGT00910000147267
Cercopithecidae	ANCESTRAL SPECIES	2	ENSGT01000000214440.A.a.b.a #9	ENSGT00940000156115 #10	ENSGT00530000063770.c.a #11	ENSGT00390000010045.g.b #12	ENSGT00950000183182.a.a #13	ENSGT01090000260093.b #14	ENSGT00950000182978.B #15	ENSGT00940000154861.d	ENSGT01060000248589.D #16	ENSGT00390000012569.a.fb.b.b.a.b #17	ENSGT00390000012569.a.fb.b.b.a.a #17	ENSGT00390000006264 #18	ENSGT00950000183168.B.a #19	ENSGT00390000003312 #20	ENSGT00940000157582 #21	ENSGT00940000155543 #22	ENSGT00940000156139 #24	ENSGT00940000162094 #23	ENSGT00390000002144 #25	ENSGT00410000025596.a.b #26	ENSGT00940000156761 #27	ENSGT00940000157669 #28	ENSGT00940000157833 #29	ENSGT00530000063698.b	ENSGT00940000156213 #30	ENSGT00940000156592 #31	ENSGT00940000157151 #32	ENSGT00940000159638 #33	ENSGT00940000153446.a.b	ENSGT00940000160209 #34	ENSGT00910000147267
Rhinopithecus	ANCESTRAL SPECIES	82	ENSGT00940000160073 #8	ENSGT01000000214440.A.a.b.a #9	ENSGT00940000156115 #10	ENSGT00530000063770.c.a #11	ENSGT00390000010045.g.b #12	ENSGT00950000183182.a.a #13	ENSGT01090000260093.b #14	ENSGT00950000182978.B #15	ENSGT00940000154861.d	ENSGT01060000248589.D #16	ENSGT00390000012569.a.fb.b.b.a.a #17	ENSGT00390000006264 #18	ENSGT00950000183168.B.a #19	ENSGT00390000003312 #20	ENSGT00940000157582 #21	ENSGT00940000155543 #22	ENSGT00940000156139 #24	ENSGT00940000162094 #23	ENSGT00390000002144 #25	ENSGT00410000025596.a.b #26	ENSGT00940000156761 #27	ENSGT00940000157669 #28	ENSGT00940000157833 #29	ENSGT00530000063698.b	ENSGT00940000156213 #30	ENSGT00940000156592 #31	ENSGT00940000157151 #32
Black snub-nosed monkey	MODERN SPECIES	1846	STX12 (ENSRBIG00000036484) #9	PPP1R8 (ENSRBIG00000012191) #10	THEMIS2 (ENSRBIG00000012387) #11	RPA2 (ENSRBIG00000036230) #12	SMPDL3B (ENSRBIG00000039924) #13	XKR8 (ENSRBIG00000041388) #14	EYA3 (ENSRBIG00000038991) #15	ENSRBIG00000036065	ENSRBIG00000003411	ENSRBIG00000035627 #17	ATP5IF1 (ENSRBIG00000044587) #18	SESN2 (ENSRBIG00000028417) #19	MED18 (ENSRBIG00000032607) #20	ENSRBIG00000029501 #17	PHACTR4 (ENSRBIG00000017683) #21	RCC1 (ENSRBIG00000031101) #22	TRNAU1AP (ENSRBIG00000029083) #24	RAB42 (ENSRBIG00000033359) #23	TAF12 (ENSRBIG00000006334) #25	GMEB1 (ENSRBIG00000001692) #26
Golden snub-nosed monkey	MODERN SPECIES	2213	STX12 (ENSRROG00000031145) #9	PPP1R8 (ENSRROG00000041525) #10	THEMIS2 (ENSRROG00000024691) #11	RPA2 (ENSRROG00000040865) #12	SMPDL3B (ENSRROG00000035411) #13	XKR8 (ENSRROG00000034100) #14	EYA3 (ENSRROG00000036974) #15	ENSRROG00000030937	PTAFR (ENSRROG00000003323) #16	ENSRROG00000013306	ENSRROG00000045532 #17	ATP5IF1 (ENSRROG00000036303) #18	SESN2 (ENSRROG00000045413) #19	MED18 (ENSRROG00000036453) #20	PHACTR4 (ENSRROG00000041295) #21	RCC1 (ENSRROG00000042995) #22	TRNAU1AP (ENSRROG00000029128) #24	RAB42 (ENSRROG00000031599) #23	TAF12 (ENSRROG00000026844) #25	GMEB1 (ENSRROG00000034775) #26	YTHDF2 (ENSRROG00000038863) #27	OPRD1 (ENSRROG00000029540) #28	ENSRROG00000035486	EPB41 (ENSRROG00000043332) #29	TMEM200B (ENSRROG00000006582)	SRSF4 (ENSRROG00000029463) #30	MECR (ENSRROG00000042945) #31	PTPRU (ENSRROG00000033586) #32
Cercopithecinae	ANCESTRAL SPECIES		ENSGT00940000160073 #8	ENSGT01000000214440.A.a.b.a #9	ENSGT00940000156115 #10	ENSGT00530000063770.c.a #11	ENSGT00390000010045.g.b #12	ENSGT00950000183182.a.a #13	ENSGT01090000260093.b #14	ENSGT00950000182978.B #15	ENSGT00940000154861.d	ENSGT01060000248589.D #16	ENSGT00390000012569.a.fb.b.b.a.a #17	ENSGT00390000006264.j #18	ENSGT00950000183168.B.a #19	ENSGT00390000003312 #20	ENSGT00940000157582 #21	ENSGT00940000155543 #22	ENSGT00940000156139 #24	ENSGT00940000162094 #23	ENSGT00390000002144 #25	ENSGT00410000025596.a.b #26	ENSGT00940000156761 #27	ENSGT00940000157669 #28	ENSGT00940000157833 #29	ENSGT00530000063698.b	ENSGT00940000156213 #30	ENSGT00940000156592 #31	ENSGT00940000157151 #32	ENSGT00940000159638 #33	ENSGT00940000153446.a.b	ENSGT00940000160209 #34	ENSGT00910000147267
Vervet Monkey	MODERN SPECIES	12	IFI6 (ENSCSAG00000000997)	FAM76A (ENSCSAG00000000999) #8	STX12 (ENSCSAG00000001000) #9	PPP1R8 (ENSCSAG00000001002) #10	THEMIS2 (ENSCSAG00000001003) #11	RPA2 (ENSCSAG00000001004) #12	XKR8 (ENSCSAG00000001005) #14	EYA3 (ENSCSAG00000001006) #15	PTAFR (ENSCSAG00000000653) #16	ENSCSAG00000000654	ENSCSAG00000001007 #17	ENSCSAG00000001008 #18	SESN2 (ENSCSAG00000001009) #19	MED18 (ENSCSAG00000001010) #20	PHACTR4 (ENSCSAG00000001011) #21	RCC1 (ENSCSAG00000001012) #22	TRNAU1AP (ENSCSAG00000001014) #24	RAB42 (ENSCSAG00000001015) #23	TAF12 (ENSCSAG00000001016) #25	GMEB1 (ENSCSAG00000001017) #26	YTHDF2 (ENSCSAG00000001018) #27	ENSCSAG00000001019	OPRD1 (ENSCSAG00000001020) #28	EPB41 (ENSCSAG00000001021) #29	TMEM200B (ENSCSAG00000000655)	SRSF4 (ENSCSAG00000001022) #30	MECR (ENSCSAG00000001023) #31	PTPRU (ENSCSAG00000001024) #32	MATN1 (ENSCSAG00000001025) #33	LAPTM5 (ENSCSAG00000001026)	SDC3 (ENSCSAG00000001027) #34
Cercopithecinae_a	ANCESTRAL SPECIES		ENSGT00940000160073 #8	ENSGT01000000214440.A.a.b.a #9	ENSGT00940000156115 #10	ENSGT00530000063770.c.a #11	ENSGT00390000010045.g.b #12	ENSGT00950000183182.a.a #13	ENSGT01090000260093.b #14	ENSGT00950000182978.B #15	ENSGT00940000154861.d	ENSGT01060000248589.D #16	ENSGT00390000012569.a.fb.b.b.a.b #17	ENSGT00390000006264.j #18	ENSGT00950000183168.B.a #19	ENSGT00390000003312 #20	ENSGT00940000157582 #21	ENSGT00940000155543 #22	ENSGT00940000156139 #24	ENSGT00390000018898.`b.b	ENSGT00940000162094 #23	ENSGT00390000002144 #25	ENSGT00410000025596.a.b #26	ENSGT00940000156761 #27	ENSGT00940000157669 #28	ENSGT00940000157833 #29	ENSGT00530000063698.b	ENSGT00940000156213 #30	ENSGT00940000156592 #31	ENSGT00940000157151 #32	ENSGT00940000159638 #33	ENSGT00940000153446.a.b	ENSGT00940000160209 #34
Cercopithecinae_b	ANCESTRAL SPECIES	1	ENSGT01000000214440.A.a.b.a #9	ENSGT00940000156115 #10	ENSGT00530000063770.c.a #11	ENSGT00390000010045.g.b #12	ENSGT00950000183182.a.a #13	ENSGT01090000260093.b #14	ENSGT00950000182978.B #15	ENSGT00940000154861.d	ENSGT01060000248589.D #16	ENSGT00390000012569.a.fb.b.b.a.b #17	ENSGT00390000012569.a.fb.b.b.a.a #17	ENSGT00390000006264.j #18	ENSGT00950000183168.B.a #19	ENSGT00390000003312 #20	ENSGT00940000157582 #21	ENSGT00940000155543 #22	ENSGT00940000156139 #24	ENSGT00390000018898.`b.b	ENSGT00940000162094 #23	ENSGT00390000002144 #25	ENSGT00410000025596.a.b #26	ENSGT00940000156761 #27	ENSGT00940000157669 #28	ENSGT00940000157833 #29	ENSGT00530000063698.b	ENSGT00940000156213 #30	ENSGT00940000156592 #31	ENSGT00940000157151 #32	ENSGT00940000159638 #33	ENSGT00940000153446.a.b	ENSGT00940000160209 #34
Olive baboon	DUPLICATION
Olive baboon	MODERN SPECIES		FAM76A (ENSPANG00000000247) #8	STX12 (ENSPANG00000007130) #9	PPP1R8 (ENSPANG00000043070) #10	THEMIS2 (ENSPANG00000005205) #11	RPA2 (ENSPANG00000017991) #12	SMPDL3B (ENSPANG00000007129) #13	XKR8 (ENSPANG00000007916) #14	EYA3 (ENSPANG00000016511) #15	ENSPANG00000042576	PTAFR (ENSPANG00000006117) #16	ENSPANG00000012833 #17	ATP5IF1 (ENSPANG00000018327) #18	SESN2 (ENSPANG00000012598) #19	MED18 (ENSPANG00000006507) #20	PHACTR4 (ENSPANG00000022866) #21	ENSPANG00000033403 #22	TRNAU1AP (ENSPANG00000016019) #24	RAB42 (ENSPANG00000015797) #23	TAF12 (ENSPANG00000022039) #25	GMEB1 (ENSPANG00000018743) #26	YTHDF2 (ENSPANG00000006550) #27	EPB41 (ENSPANG00000000507) #29	TMEM200B (ENSPANG00000017831)	SRSF4 (ENSPANG00000021937) #30	MECR (ENSPANG00000007687) #31	PTPRU (ENSPANG00000011555) #32	ENSPANG00000038388	MATN1 (ENSPANG00000016577) #33	LAPTM5 (ENSPANG00000016018)	SDC3 (ENSPANG00000008025) #34	PUM1 (ENSPANG00000016338) #35
Olive baboon	MODERN SPECIES	2	ENSPANG00000040344	ENSPANG00000000253	ENSPANG00000047502	ZFAND4 (ENSPANG00000022669)	MARCHF8 (ENSPANG00000022668)	ALOX5 (ENSPANG00000022667)	PARG (ENSPANG00000022653)	TIMM23 (ENSPANG00000022652)	NCOA4 (ENSPANG00000022656)	MSMB (ENSPANG00000022672)	ANTXRL (ENSPANG00000022616)	ENSPANG00000043475	RBP3 (ENSPANG00000022632)	GDF2 (ENSPANG00000030559)	GDF10 (ENSPANG00000022630)	ENSPANG00000043437 #22	PTPN20 (ENSPANG00000022629)	ENSPANG00000022628	MAPK8 (ENSPANG00000022627)	ARHGAP22 (ENSPANG00000022626)	WDFY4 (ENSPANG00000022623)	LRRC18 (ENSPANG00000022625)	VSTM4 (ENSPANG00000022622)	C10orf71 (ENSPANG00000041901)	DRGX (ENSPANG00000035370)	ERCC6 (ENSPANG00000022650)	SLC18A3 (ENSPANG00000011656)	CHAT (ENSPANG00000022655)	C10orf53 (ENSPANG00000038571)	OGDHL (ENSPANG00000022654)	ENSPANG00000044690
Cercopithecinae_d	ANCESTRAL SPECIES	1	ENSGT00940000160073 #8	ENSGT01000000214440.A.a.b.a #9	ENSGT00940000156115 #10	ENSGT00530000063770.c.a #11	ENSGT00390000010045.g.b #12	ENSGT00950000183182.a.a #13	ENSGT01090000260093.b #14	ENSGT00950000182978.B #15	ENSGT00940000154861.d	ENSGT01060000248589.D #16	ENSGT00390000012569.a.fb.b.b.a.b #17	ENSGT00390000006264.j #18	ENSGT00950000183168.B.a #19	ENSGT00390000003312 #20	ENSGT00940000157582 #21	ENSGT00940000155543 #22	ENSGT00940000156139 #24	ENSGT00390000018898.`b.b	ENSGT00940000162094 #23	ENSGT00390000002144 #25	ENSGT00410000025596.a.b #26	ENSGT00940000156761 #27	ENSGT00940000157669 #28	ENSGT00940000157833 #29	ENSGT00530000063698.b	ENSGT00940000156213 #30	ENSGT00940000156592 #31	ENSGT00940000157151 #32	ENSGT00940000159638 #33	ENSGT00940000153446.a.b	ENSGT00940000160209 #34
Drill	MODERN SPECIES	832	STX12 (ENSMLEG00000038548) #9	PPP1R8 (ENSMLEG00000041495) #10	THEMIS2 (ENSMLEG00000040682) #11	RPA2 (ENSMLEG00000031567) #12	SMPDL3B (ENSMLEG00000039800) #13	XKR8 (ENSMLEG00000043403) #14	EYA3 (ENSMLEG00000042664) #15	ENSMLEG00000033540	PTAFR (ENSMLEG00000000550) #16	ENSMLEG00000003164 #17	ENSMLEG00000027639	ATP5IF1 (ENSMLEG00000031790) #18	SESN2 (ENSMLEG00000036334) #19	MED18 (ENSMLEG00000030739) #20	PHACTR4 (ENSMLEG00000030370) #21	RCC1 (ENSMLEG00000032267) #22	TRNAU1AP (ENSMLEG00000015649) #24	ENSMLEG00000044462	RAB42 (ENSMLEG00000035485) #23	TAF12 (ENSMLEG00000029589) #25	GMEB1 (ENSMLEG00000018636) #26	YTHDF2 (ENSMLEG00000030371) #27	OPRD1 (ENSMLEG00000031448) #28	EPB41 (ENSMLEG00000018623) #29	SRSF4 (ENSMLEG00000031619) #30	MECR (ENSMLEG00000028607) #31	PTPRU (ENSMLEG00000031671) #32
Sooty mangabey	MODERN SPECIES	227	FAM76A (ENSCATG00000033886) #8	STX12 (ENSCATG00000032583) #9	PPP1R8 (ENSCATG00000032635) #10	THEMIS2 (ENSCATG00000031969) #11	RPA2 (ENSCATG00000044566) #12	SMPDL3B (ENSCATG00000017005) #13	XKR8 (ENSCATG00000015702) #14	EYA3 (ENSCATG00000027843) #15	ENSCATG00000017621	PTAFR (ENSCATG00000005828) #16	ENSCATG00000033266 #17	ATP5IF1 (ENSCATG00000044245) #18	SESN2 (ENSCATG00000016723) #19	MED18 (ENSCATG00000033221) #20	PHACTR4 (ENSCATG00000015008) #21	RCC1 (ENSCATG00000033576) #22	ENSCATG00000033176	TRNAU1AP (ENSCATG00000044617) #24	ENSCATG00000004302 #23	TAF12 (ENSCATG00000043940) #25	GMEB1 (ENSCATG00000015607) #26	YTHDF2 (ENSCATG00000044332) #27	OPRD1 (ENSCATG00000027331) #28	ENSCATG00000006297	EPB41 (ENSCATG00000028944) #29	TMEM200B (ENSCATG00000005039)	SRSF4 (ENSCATG00000031440) #30	MECR (ENSCATG00000043979) #31	PTPRU (ENSCATG00000036995) #32	MATN1 (ENSCATG00000044560) #33	LAPTM5 (ENSCATG00000043956)
Macaca	ANCESTRAL SPECIES		ENSGT00940000160073 #8	ENSGT01000000214440.A.a.b.a #9	ENSGT00940000156115 #10	ENSGT00530000063770.c.a #11	ENSGT00390000010045.g.b #12	ENSGT00950000183182.a.a #13	ENSGT01090000260093.b #14	ENSGT00950000182978.B #15	ENSGT00940000154861.d	ENSGT01060000248589.D #16	ENSGT00390000012569.a.fb.b.b.a.a #17	ENSGT00390000006264.i.a #18	ENSGT00950000183168.B.a #19	ENSGT00390000003312 #20	ENSGT00940000157582 #21	ENSGT00940000155543 #22	ENSGT00940000156139 #24	ENSGT00390000018898.`b.b	ENSGT00940000162094 #23	ENSGT00390000002144 #25	ENSGT00410000025596.a.b #26	ENSGT00940000156761 #27	ENSGT00940000157669 #28	ENSGT00390000010721.a.a.b	ENSGT00940000157833 #29	ENSGT00530000063698.b	ENSGT00940000156213 #30	ENSGT00940000156592 #31	ENSGT00940000157151 #32	ENSGT00940000159638 #33	ENSGT00940000153446.a.b
Macaca_a	ANCESTRAL SPECIES		ENSGT00940000163178	ENSGT00940000160073 #8	ENSGT01000000214440.A.a.b.a #9	ENSGT00940000156115 #10	ENSGT00530000063770.c.a #11	ENSGT00390000010045.g.b #12	ENSGT00950000183182.a.a #13	ENSGT01090000260093.b #14	ENSGT00950000182978.B #15	ENSGT01060000248589.D #16	ENSGT00390000012569.a.fb.b.b.a.a #17	ENSGT00390000006264.i.a #18	ENSGT00950000183168.B.a #19	ENSGT00390000003312 #20	ENSGT00940000157582 #21	ENSGT00940000155543 #22	ENSGT00940000156139 #24	ENSGT00940000162094 #23	ENSGT00390000002144 #25	ENSGT00410000025596.a.b #26	ENSGT00940000156761 #27	ENSGT00940000157669 #28	ENSGT00390000010721.a.a.b	ENSGT00940000157833 #29	ENSGT00530000063698.b	ENSGT00940000156213 #30	ENSGT00940000156592 #31	ENSGT00940000157151 #32	ENSGT01100000263539.b.a.a.a.a.a.b.b.a.a.b.a.b.a.b.a.b.a.a.a	ENSGT00940000159638 #33	ENSGT00940000153446.a.b
Crab-eating macaque	MODERN SPECIES		FAM76A (ENSMFAG00000051312) #8	PPP1R8 (ENSMFAG00000001557) #10	THEMIS2 (ENSMFAG00000030730) #11	RPA2 (ENSMFAG00000022522) #12	SMPDL3B (ENSMFAG00000044059) #13	XKR8 (ENSMFAG00000037317) #14	STX12 (ENSMFAG00000003645) #9	EYA3 (ENSMFAG00000045224) #15	PTAFR (ENSMFAG00000063827) #16	ENSMFAG00000040941	ATP5IF1 (ENSMFAG00000037657) #18	SESN2 (ENSMFAG00000043063) #19	ENSMFAG00000048953	ENSMFAG00000053009	PHACTR4 (ENSMFAG00000040093) #21	RCC1 (ENSMFAG00000039145) #22	ENSMFAG00000064996	TRNAU1AP (ENSMFAG00000043751) #24	RAB42 (ENSMFAG00000060532) #23	TAF12 (ENSMFAG00000041370) #25	GMEB1 (ENSMFAG00000031717) #26	YTHDF2 (ENSMFAG00000026128) #27	OPRD1 (ENSMFAG00000034678) #28	ENSMFAG00000003794	EPB41 (ENSMFAG00000046344) #29	ENSMFAG00000062308	TMEM200B (ENSMFAG00000038738)	SRSF4 (ENSMFAG00000041784) #30	MECR (ENSMFAG00000000155) #31	PTPRU (ENSMFAG00000001608) #32	ENSMFAG00000063061
Rhesus	MODERN SPECIES		ENSMMUG00000057915	STX12 (ENSMMUG00000012252) #10	ENSMMUG00000056206	THEMIS2 (ENSMMUG00000018170) #11	RPA2 (ENSMMUG00000018172) #12	ENSMMUG00000018175 #13	XKR8 (ENSMMUG00000054886) #14	EYA3 (ENSMMUG00000012965) #15	ENSMMUG00000060250	PTAFR (ENSMMUG00000063261) #16	DNAJC8 (ENSMMUG00000017080) #17	ATP5IF1 (ENSMMUG00000018678) #18	SESN2 (ENSMMUG00000019993) #19	MED18 (ENSMMUG00000010353) #20	PHACTR4 (ENSMMUG00000019216) #21	RCC1 (ENSMMUG00000018338) #22	TRNAU1AP (ENSMMUG00000006561) #24	RAB42 (ENSMMUG00000006559) #23	TAF12 (ENSMMUG00000050311) #25	GMEB1 (ENSMMUG00000011390) #26	ENSMMUG00000055489	YTHDF2 (ENSMMUG00000011391) #27	EPB41 (ENSMMUG00000011377) #29	TMEM200B (ENSMMUG00000011378)	SRSF4 (ENSMMUG00000007110) #30	MECR (ENSMMUG00000015659) #31	PTPRU (ENSMMUG00000015661) #32	ENSMMUG00000057173	ENSMMUG00000051737	MATN1 (ENSMMUG00000054963) #33	LAPTM5 (ENSMMUG00000008744)
Pig-tailed macaque	DUPLICATION
Pig-tailed macaque	MODERN SPECIES	129	ENSMNEG00000042478	ENSMNEG00000041640	ENSMNEG00000041397	SHLD2 (ENSMNEG00000035685)	ENSMNEG00000030901	GPRIN2 (ENSMNEG00000027130)	ENSMNEG00000024895	ENSMNEG00000015982	ENSMNEG00000034700	ENSMNEG00000035244	ENSMNEG00000038712	ENSMNEG00000032122	RBP3 (ENSMNEG00000040793)	GDF2 (ENSMNEG00000039147)	GDF10 (ENSMNEG00000037022)	ENSMNEG00000042349 #22	PTPN20 (ENSMNEG00000035527)	FRMPD2 (ENSMNEG00000031211)	MAPK8 (ENSMNEG00000030681)	ENSMNEG00000023358	ENSMNEG00000023123	ARHGAP22 (ENSMNEG00000040424)	LRRC18 (ENSMNEG00000033761)	WDFY4 (ENSMNEG00000001096)	VSTM4 (ENSMNEG00000032340)	FAM170B (ENSMNEG00000029499)	TMEM273 (ENSMNEG00000034199)	DRGX (ENSMNEG00000043532)	ERCC6 (ENSMNEG00000043701)	SLC18A3 (ENSMNEG00000015760)	CHAT (ENSMNEG00000042067)
Pig-tailed macaque	MODERN SPECIES	217	ENSMNEG00000041438	STX12 (ENSMNEG00000005186) #9	PPP1R8 (ENSMNEG00000030784) #10	THEMIS2 (ENSMNEG00000036095) #11	RPA2 (ENSMNEG00000032153) #12	SMPDL3B (ENSMNEG00000040406) #13	XKR8 (ENSMNEG00000037672) #14	EYA3 (ENSMNEG00000030436) #15	ENSMNEG00000043243	PTAFR (ENSMNEG00000023879) #16	ENSMNEG00000011552 #17	ATP5IF1 (ENSMNEG00000020230) #18	SESN2 (ENSMNEG00000040155) #19	MED18 (ENSMNEG00000040104) #20	PHACTR4 (ENSMNEG00000033673) #21	ENSMNEG00000005673 #22	TRNAU1AP (ENSMNEG00000044201) #24	ENSMNEG00000029703	RAB42 (ENSMNEG00000032871) #23	TAF12 (ENSMNEG00000032703) #25	GMEB1 (ENSMNEG00000035670) #26	YTHDF2 (ENSMNEG00000041161) #27	OPRD1 (ENSMNEG00000039650) #28	ENSMNEG00000002799	EPB41 (ENSMNEG00000029961) #29	TMEM200B (ENSMNEG00000025032)	SRSF4 (ENSMNEG00000034931) #30	MECR (ENSMNEG00000042809) #31	PTPRU (ENSMNEG00000044104) #32	MATN1 (ENSMNEG00000031564) #33	LAPTM5 (ENSMNEG00000012765)
Hominoidea	ANCESTRAL SPECIES	3	ENSGT01000000214440.A.a.b.a #9	ENSGT00940000156115 #10	ENSGT00550000076274	ENSGT00530000063770.c.a #11	ENSGT00390000010045.g.b #12	ENSGT00950000183182.a.a #13	ENSGT01090000260093.b #14	ENSGT00950000182978.B #15	ENSGT00940000154861.d	ENSGT01060000248589.D #16	ENSGT00390000012569.a.fb.b.a.a #17	ENSGT00390000006264 #18	ENSGT00950000183168.B.a #19	ENSGT00390000003312 #20	ENSGT00940000157582 #21	ENSGT00940000155543 #22	ENSGT00940000156139 #24	ENSGT00940000162094 #23	ENSGT00390000002144 #25	ENSGT00410000025596.a.b #26	ENSGT00940000156761 #27	ENSGT00940000157669 #28	ENSGT00940000157833 #29	ENSGT00530000063698.b	ENSGT00940000156213 #30	ENSGT00940000156592 #31	ENSGT00940000157151 #32	ENSGT00940000159638 #33	ENSGT00940000153446.a.b	ENSGT00940000160209 #34	ENSGT00940000158079 #35
Gibbon	MODERN SPECIES	16	PPP1R8 (ENSNLEG00000009676) #10	ENSNLEG00000009695	ENSNLEG00000009697 #11	RPA2 (ENSNLEG00000009702) #12	SMPDL3B (ENSNLEG00000009709) #13	XKR8 (ENSNLEG00000009722) #14	EYA3 (ENSNLEG00000009724) #15	PTAFR (ENSNLEG00000009760) #16	DNAJC8 (ENSNLEG00000009762) #17	ATP5IF1 (ENSNLEG00000032433) #18	SESN2 (ENSNLEG00000009780) #19	MED18 (ENSNLEG00000009789) #20	ENSNLEG00000009792 #21	ENSNLEG00000034272	ENSNLEG00000029704	RCC1 (ENSNLEG00000009802) #22	TRNAU1AP (ENSNLEG00000009822) #24	ENSNLEG00000018583 #23	ENSNLEG00000009827 #25	GMEB1 (ENSNLEG00000009837) #26	YTHDF2 (ENSNLEG00000009856) #27	ENSNLEG00000009864 #28	EPB41 (ENSNLEG00000009867) #29	SRSF4 (ENSNLEG00000009916) #30	ENSNLEG00000009932 #31	PTPRU (ENSNLEG00000031816) #32
Hominidae	ANCESTRAL SPECIES	3	ENSGT01000000214440.A.a.b.a #9	ENSGT00940000156115 #10	ENSGT00550000076274	ENSGT00530000063770.c.a #11	ENSGT00390000010045.g.b #12	ENSGT00950000183182.a.a #13	ENSGT01090000260093.b #14	ENSGT00950000182978.B #15	ENSGT00940000154861.d	ENSGT01060000248589.D #16	ENSGT00390000012569.a.fb.b.a.a #17	ENSGT00390000006264 #18	ENSGT00950000183168.B.a #19	ENSGT00390000003312 #20	ENSGT00940000157582 #21	ENSGT00940000155543 #22	ENSGT00940000156139 #24	ENSGT00940000162094 #23	ENSGT00390000002144 #25	ENSGT00410000025596.a.b #26	ENSGT00940000156761 #27	ENSGT00940000157669 #28	ENSGT00940000157833 #29	ENSGT00530000063698.b	ENSGT00940000156213 #30	ENSGT00940000156592 #31	ENSGT00940000157151 #32	ENSGT00940000159638 #33	ENSGT00940000153446.a.b	ENSGT00940000160209 #34	ENSGT00940000158079 #35
Orangutan	MODERN SPECIES		FAM76A (ENSPPYG00000001656) #8	STX12 (ENSPPYG00000001655) #9	ENSPPYG00000001653	PPP1R8 (ENSPPYG00000001654) #10	THEMIS2 (ENSPPYG00000001652) #11	RPA2 (ENSPPYG00000001651) #12	SMPDL3B (ENSPPYG00000001650) #13	XKR8 (ENSPPYG00000039433) #14	EYA3 (ENSPPYG00000001648) #15	PTAFR (ENSPPYG00000001647) #16	ENSPPYG00000025833 #17	ATP5IF1 (ENSPPYG00000001644) #18	SESN2 (ENSPPYG00000001643) #19	MED18 (ENSPPYG00000001642) #20	PHACTR4 (ENSPPYG00000001641) #21	RCC1 (ENSPPYG00000001640) #22	TRNAU1AP (ENSPPYG00000038044) #24	RAB42 (ENSPPYG00000034855) #23	TAF12 (ENSPPYG00000001636) #25	GMEB1 (ENSPPYG00000001635) #26	YTHDF2 (ENSPPYG00000001634) #27	OPRD1 (ENSPPYG00000001633) #28	EPB41 (ENSPPYG00000001631) #29	TMEM200B (ENSPPYG00000001630)	SRSF4 (ENSPPYG00000001629) #30	ENSPPYG00000001628 #31	ENSPPYG00000041302	PTPRU (ENSPPYG00000001627) #32	MATN1 (ENSPPYG00000001625) #33	LAPTM5 (ENSPPYG00000001624)	SDC3 (ENSPPYG00000001623) #34
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	3	ENSGT00940000156115 #10	ENSGT00550000076274	ENSGT00530000063770.c.a #11	ENSGT00390000010045.g.b #12	ENSGT00950000183182.a.a #13	ENSGT01090000260093.b #14	ENSGT00950000182978.B #15	ENSGT00940000154861.d	ENSGT01060000248589.D #16	ENSGT00390000012569.a.fb.b.a.a #17	ENSGT00390000006264 #18	ENSGT00950000183168.B.a #19	ENSGT00390000003312 #20	ENSGT00940000165187	ENSGT00940000157582 #21	ENSGT00940000155543 #22	ENSGT00940000156139 #24	ENSGT00940000162094.a #23	ENSGT00390000002144 #25	ENSGT00410000025596.a.b #26	ENSGT00940000156761 #27	ENSGT00940000157669 #28	ENSGT00940000157833 #29	ENSGT00530000063698.b	ENSGT00940000156213 #30	ENSGT00940000156592 #31	ENSGT00940000157151 #32	ENSGT00940000159638 #33	ENSGT00940000153446.a.b	ENSGT00940000160209 #34	ENSGT00940000158079 #35
Homo/Pan group	ANCESTRAL SPECIES	4	ENSGT00940000156115 #10	ENSGT00550000076274	ENSGT00530000063770.c.a #11	ENSGT00390000010045.g.b #12	ENSGT00950000183182.a.a #13	ENSGT01090000260093.b #14	ENSGT00950000182978.B #15	ENSGT00940000154861.d	ENSGT01060000248589.D #16	ENSGT00390000012569.a.fb.b.a.a #17	ENSGT00390000006264 #18	ENSGT00950000183168.B.a #19	ENSGT00390000003312 #20	ENSGT00940000165187	ENSGT00940000157582 #21	ENSGT00940000155543 #22	ENSGT00940000156139 #24	ENSGT00940000162094.a #23	ENSGT00390000002144 #25	ENSGT00410000025596.a.b #26	ENSGT00940000156761 #27	ENSGT00940000157669 #28	ENSGT00940000157833 #29	ENSGT00530000063698.b	ENSGT00940000156213 #30	ENSGT00940000156592 #31	ENSGT00940000157151 #32	ENSGT00940000159638 #33	ENSGT00940000153446.a.b	ENSGT00940000160209 #34	ENSGT00940000158079 #35
Pan	ANCESTRAL SPECIES		ENSGT00940000156115 #10	ENSGT00550000076274	ENSGT00530000063770.c.a #11	ENSGT00390000010045.g.b #12	ENSGT00950000183182.a.a #13	ENSGT01090000260093.b #14	ENSGT00950000182978.B #15	ENSGT00940000154861.d	ENSGT01060000248589.D #16	ENSGT00390000012569.a.fb.b.a.a #17	ENSGT00390000006264 #18	ENSGT00950000183168.B.a #19	ENSGT00390000003312 #20	ENSGT00940000165187	ENSGT00940000157582 #21	ENSGT00940000155543 #22	ENSGT00940000156139 #24	ENSGT00940000162094.a #23	ENSGT00390000002144 #25	ENSGT00410000025596.a.b #26	ENSGT00940000156761 #27	ENSGT00940000157669 #28	ENSGT00940000157833 #29	ENSGT00530000063698.b	ENSGT00940000156213 #30	ENSGT00940000156592 #31	ENSGT00940000157151 #32	ENSGT00940000159638 #33	ENSGT00940000153446.a.b	ENSGT00940000160209 #34	ENSGT00940000158079 #35
Chimpanzee	MODERN SPECIES		PPP1R8 (ENSPTRG00000000417) #10	ENSPTRG00000052043	THEMIS2 (ENSPTRG00000000419) #11	RPA2 (ENSPTRG00000000420) #12	SMPDL3B (ENSPTRG00000000421) #13	XKR8 (ENSPTRG00000000422) #14	EYA3 (ENSPTRG00000000423) #15	ENSPTRG00000044631	PTAFR (ENSPTRG00000000424) #16	DNAJC8 (ENSPTRG00000000426) #17	ATP5IF1 (ENSPTRG00000000428) #18	SESN2 (ENSPTRG00000000429) #19	MED18 (ENSPTRG00000000431) #20	PHACTR4 (ENSPTRG00000030718) #21	ENSPTRG00000047179	RCC1 (ENSPTRG00000000432) #22	TRNAU1AP (ENSPTRG00000000434) #24	ENSPTRG00000045612	RAB42 (ENSPTRG00000000436) #23	TAF12 (ENSPTRG00000000437) #25	GMEB1 (ENSPTRG00000000438) #26	YTHDF2 (ENSPTRG00000000439) #27	OPRD1 (ENSPTRG00000000440) #28	EPB41 (ENSPTRG00000000442) #29	TMEM200B (ENSPTRG00000000444)	SRSF4 (ENSPTRG00000000445) #30	MECR (ENSPTRG00000000446) #31	PTPRU (ENSPTRG00000000447) #32	MATN1 (ENSPTRG00000000449) #33	LAPTM5 (ENSPTRG00000000450)	SDC3 (ENSPTRG00000000451) #34
Bonobo	MODERN SPECIES		PPP1R8 (ENSPPAG00000036845) #10	ENSPPAG00000004249	THEMIS2 (ENSPPAG00000031100) #11	RPA2 (ENSPPAG00000021088) #12	SMPDL3B (ENSPPAG00000033356) #13	XKR8 (ENSPPAG00000032312) #14	EYA3 (ENSPPAG00000038235) #15	ENSPPAG00000041305	PTAFR (ENSPPAG00000024566) #16	DNAJC8 (ENSPPAG00000032103) #17	ATP5IF1 (ENSPPAG00000043083) #18	SESN2 (ENSPPAG00000036650) #19	MED18 (ENSPPAG00000033816) #20	PHACTR4 (ENSPPAG00000033477) #21	ENSPPAG00000027675	RCC1 (ENSPPAG00000030910) #22	TRNAU1AP (ENSPPAG00000033927) #24	RAB42 (ENSPPAG00000043954) #23	ENSPPAG00000027453 #25	GMEB1 (ENSPPAG00000038756) #26	YTHDF2 (ENSPPAG00000032722) #27	OPRD1 (ENSPPAG00000041756) #28	EPB41 (ENSPPAG00000038163) #29	SRSF4 (ENSPPAG00000028357) #30	MECR (ENSPPAG00000038550) #31	PTPRU (ENSPPAG00000001262) #32	ENSPPAG00000022035	MATN1 (ENSPPAG00000003456) #33	LAPTM5 (ENSPPAG00000030829)	SDC3 (ENSPPAG00000032002) #34	PUM1 (ENSPPAG00000044003) #35
Human	MODERN SPECIES		IFI6 (ENSG00000126709)	FAM76A (ENSG00000009780) #8	STX12 (ENSG00000117758) #9	PPP1R8 (ENSG00000117751) #10	THEMIS2 (ENSG00000130775) #11	RPA2 (ENSG00000117748) #12	SMPDL3B (ENSG00000130768) #13	XKR8 (ENSG00000158156) #14	EYA3 (ENSG00000158161) #15	PTAFR (ENSG00000169403) #16	DNAJC8 (ENSG00000126698) #17	ATP5IF1 (ENSG00000130770) #18	SESN2 (ENSG00000130766) #19	MED18 (ENSG00000130772) #20	PHACTR4 (ENSG00000204138) #21	RCC1 (ENSG00000180198) #22	TRNAU1AP (ENSG00000180098) #24	TAF12 (ENSG00000120656) #25	RAB42 (ENSG00000188060) #23	GMEB1 (ENSG00000162419) #26	YTHDF2 (ENSG00000198492) #27	OPRD1 (ENSG00000116329) #28	EPB41 (ENSG00000159023) #29	TMEM200B (ENSG00000253304)	SRSF4 (ENSG00000116350) #30	MECR (ENSG00000116353) #31	PTPRU (ENSG00000060656) #32	ENSG00000289710	MATN1 (ENSG00000162510) #33	LAPTM5 (ENSG00000162511)	SDC3 (ENSG00000162512) #34
Gorilla	MODERN SPECIES		ENSGGOG00000040440	THEMIS2 (ENSGGOG00000009217) #11	RPA2 (ENSGGOG00000015287) #12	SMPDL3B (ENSGGOG00000014912) #13	XKR8 (ENSGGOG00000014917) #14	EYA3 (ENSGGOG00000008544) #15	ENSGGOG00000023525	ENSGGOG00000043416	PTAFR (ENSGGOG00000014295) #16	DNAJC8 (ENSGGOG00000000821) #17	ATP5IF1 (ENSGGOG00000000822) #18	SESN2 (ENSGGOG00000014485) #19	MED18 (ENSGGOG00000007555) #20	PHACTR4 (ENSGGOG00000012455) #21	ENSGGOG00000038109	ENSGGOG00000007119 #22	TRNAU1AP (ENSGGOG00000003511) #24	RAB42 (ENSGGOG00000008561) #23	ENSGGOG00000008564 #25	GMEB1 (ENSGGOG00000009221) #26	YTHDF2 (ENSGGOG00000024069) #27	OPRD1 (ENSGGOG00000002157) #28	EPB41 (ENSGGOG00000004272) #29	TMEM200B (ENSGGOG00000036267)	SRSF4 (ENSGGOG00000002444) #30	ENSGGOG00000003122 #31	PTPRU (ENSGGOG00000006305) #32	MATN1 (ENSGGOG00000007826) #33	LAPTM5 (ENSGGOG00000017026)	SDC3 (ENSGGOG00000027183) #34	PUM1 (ENSGGOG00000011983) #35
Laurasiatheria	ANCESTRAL SPECIES		ENSGT00940000163178	ENSGT00940000160073 #8	ENSGT01000000214440.A.a.b.a #9	ENSGT00940000156115 #10	ENSGT00530000063770.c.a #11	ENSGT00390000010045 #12	ENSGT00950000183182.a.a #13	ENSGT01090000260093.b #14	ENSGT00950000182978.B #15	ENSGT01060000248589.D #16	ENSGT00390000012569.a #17	ENSGT00390000006264 #18	ENSGT00950000183168.B.a #19	ENSGT00390000003312 #20	ENSGT00940000157582 #21	ENSGT00940000155543 #22	ENSGT00940000156139 #24	ENSGT00940000162094 #23	ENSGT00940000164873	ENSGT00390000002144 #25	ENSGT00410000025596.a.b #26	ENSGT01100000263839	ENSGT00940000156761 #27	ENSGT00940000157669 #28	ENSGT00940000157833 #29	ENSGT00530000063698.b	ENSGT00940000156213 #30	ENSGT00940000156592 #31	ENSGT00940000157151 #32	ENSGT00940000159638 #33	ENSGT00940000153446.a.b
Laurasiatheria_a	ANCESTRAL SPECIES		ENSGT00940000163178	ENSGT00940000160073 #8	ENSGT01000000214440.A.a.b.a #9	ENSGT00940000156115 #10	ENSGT00530000063770.c.a #11	ENSGT00390000010045 #12	ENSGT00950000183182.a.a #13	ENSGT01090000260093.b #14	ENSGT00950000182978.B #15	ENSGT01060000248589.D #16	ENSGT00390000012569.a #17	ENSGT00390000006264 #18	ENSGT00950000183168.B.a #19	ENSGT00390000003312 #20	ENSGT00940000157582 #21	ENSGT00940000155543 #22	ENSGT00940000156139 #24	ENSGT00940000162094 #23	ENSGT00940000164873	ENSGT00390000002144 #25	ENSGT00410000025596.a.b #26	ENSGT01100000263839	ENSGT00940000156761 #27	ENSGT00940000157669 #28	ENSGT00940000157833 #29	ENSGT00530000063698.b	ENSGT00940000156213 #30	ENSGT00950000185227	ENSGT00940000156592 #31	ENSGT00960000190201	ENSGT00940000157151 #32
Artiodactyla	ANCESTRAL SPECIES		ENSGT00940000163178	ENSGT00940000160073 #8	ENSGT01000000214440.A.a.b.a #9	ENSGT00940000156115 #10	ENSGT00530000063770.c.a #11	ENSGT00390000010045 #12	ENSGT00950000183182.a.a #13	ENSGT01090000260093.b #14	ENSGT00950000182978.B #15	ENSGT01060000248589.D #16	ENSGT00390000012569.a #17	ENSGT00390000006264 #18	ENSGT00950000183168.B.a #19	ENSGT00390000003312 #20	ENSGT00940000157582 #21	ENSGT00940000155543 #22	ENSGT00940000156139 #24	ENSGT00940000162094 #23	ENSGT00390000002144 #25	ENSGT00410000025596.a.b #26	ENSGT00940000156761 #27	ENSGT00940000157669 #28	ENSGT00940000157833 #29	ENSGT00530000063698.b	ENSGT00940000156213 #30	ENSGT00950000185227	ENSGT00940000156592 #31	ENSGT00960000190201	ENSGT00940000157151 #32	ENSGT00940000159638 #33	ENSGT00940000153446.a.b
Suina	ANCESTRAL SPECIES	10	ENSGT00940000163178	ENSGT00940000160073 #8	ENSGT01000000214440.A.a.b.a #9	ENSGT00940000156115 #10	ENSGT00530000063770.c.a #11	ENSGT00390000010045 #12	ENSGT00950000183182.a.a #13	ENSGT01090000260093.b #14	ENSGT00950000182978.B #15	ENSGT01060000248589.D #16	ENSGT00390000012569.a #17	ENSGT00390000006264 #18	ENSGT00950000183168.B.a #19	ENSGT00390000003312 #20	ENSGT00940000157582 #21	ENSGT00940000155543 #22	ENSGT00940000156139 #24	ENSGT00940000162094 #23	ENSGT00390000002144 #25	ENSGT00410000025596.a.b #26	ENSGT00940000156761 #27	ENSGT00940000157669 #28	ENSGT00940000157833 #29	ENSGT00530000063698.b	ENSGT00940000156213 #30	ENSGT00940000156592 #31	ENSGT00940000157151 #32	ENSGT00940000159638 #33	ENSGT00940000153446.a.b	ENSGT00940000160209.f #34	ENSGT00940000158079 #35
Pig	MODERN SPECIES	14	FAM76A (ENSSSCG00000027894) #8	STX12 (ENSSSCG00000024927) #9	PPP1R8 (ENSSSCG00000021634) #10	ENSSSCG00000062637	THEMIS2 (ENSSSCG00000003584) #11	RPA2 (ENSSSCG00000003583) #12	SMPDL3B (ENSSSCG00000003582) #13	XKR8 (ENSSSCG00000030623) #14	EYA3 (ENSSSCG00000003580) #15	PTAFR (ENSSSCG00000031788) #16	DNAJC8 (ENSSSCG00000038907) #17	ATP5IF1 (ENSSSCG00000027072) #18	SESN2 (ENSSSCG00000029438) #19	MED18 (ENSSSCG00000044404) #20	PHACTR4 (ENSSSCG00000028973) #21	RCC1 (ENSSSCG00000029097) #22	TRNAU1AP (ENSSSCG00000030284) #24	ENSSSCG00000046793	RAB42 (ENSSSCG00000030432) #23	TAF12 (ENSSSCG00000027530) #25	GMEB1 (ENSSSCG00000038872) #26	YTHDF2 (ENSSSCG00000027686) #27	OPRD1 (ENSSSCG00000047080) #28	EPB41 (ENSSSCG00000003586) #29	ENSSSCG00000059283	TMEM200B (ENSSSCG00000058017)	SRSF4 (ENSSSCG00000051929) #30	MECR (ENSSSCG00000003589) #31	PTPRU (ENSSSCG00000003590) #32	ENSSSCG00000049560	MATN1 (ENSSSCG00000022554) #33
Chacoan peccary	MODERN SPECIES	808	IFI6 (ENSCWAG00000010588)	FAM76A (ENSCWAG00000010629) #8	STX12 (ENSCWAG00000010733) #9	PPP1R8 (ENSCWAG00000010777) #10	ENSCWAG00000010859 #11	RPA2 (ENSCWAG00000010943) #12	SMPDL3B (ENSCWAG00000011003) #13	XKR8 (ENSCWAG00000011141) #14	EYA3 (ENSCWAG00000011224) #15	PTAFR (ENSCWAG00000011585) #16	DNAJC8 (ENSCWAG00000011604) #17	ATP5IF1 (ENSCWAG00000011697) #18	SESN2 (ENSCWAG00000011757) #19	MED18 (ENSCWAG00000011863) #20	PHACTR4 (ENSCWAG00000011905) #21	RCC1 (ENSCWAG00000012023) #22	TRNAU1AP (ENSCWAG00000012117) #24	RAB42 (ENSCWAG00000006902) #23	TAF12 (ENSCWAG00000006921) #25	GMEB1 (ENSCWAG00000006958) #26	YTHDF2 (ENSCWAG00000007018) #27	OPRD1 (ENSCWAG00000007029) #28	EPB41 (ENSCWAG00000007295) #29	TMEM200B (ENSCWAG00000015967)	SRSF4 (ENSCWAG00000015977) #30	MECR (ENSCWAG00000016005) #31	PTPRU (ENSCWAG00000016058) #32	MATN1 (ENSCWAG00000016130) #33	LAPTM5 (ENSCWAG00000016188)	SDC3 (ENSCWAG00000016221) #34	PUM1 (ENSCWAG00000016294) #35
Artiodactyla_a	ANCESTRAL SPECIES		ENSGT00940000163178	ENSGT00940000160073 #8	ENSGT01000000214440.A.a.b.a #9	ENSGT00940000156115 #10	ENSGT00530000063770.c.a #11	ENSGT00390000010045 #12	ENSGT00950000183182.a.a #13	ENSGT01090000260093.b #14	ENSGT00950000182978.B #15	ENSGT01060000248589.D #16	ENSGT00390000012569.a #17	ENSGT00390000006264 #18	ENSGT00950000183168.B.a #19	ENSGT00390000003312 #20	ENSGT00940000157582 #21	ENSGT00940000155543 #22	ENSGT00940000156139 #24	ENSGT00940000162094 #23	ENSGT00390000002144 #25	ENSGT00410000025596.a.b #26	ENSGT00940000156761 #27	ENSGT00940000157669 #28	ENSGT00940000157833 #29	ENSGT00530000063698.b	ENSGT00940000156213 #30	ENSGT00950000185227	ENSGT00940000156592 #31	ENSGT00960000190201	ENSGT00940000157151 #32	ENSGT00940000159638 #33	ENSGT00940000153446.a.b
Artiodactyla_b	ANCESTRAL SPECIES		ENSGT00940000163178	ENSGT00940000160073 #8	ENSGT01000000214440.A.a.b.a #9	ENSGT00940000156115 #10	ENSGT00530000063770.c.a #11	ENSGT00390000010045 #12	ENSGT00950000183182.a.a #13	ENSGT01090000260093.b #14	ENSGT00950000182978.B #15	ENSGT01060000248589.D #16	ENSGT00390000012569.a #17	ENSGT00390000006264 #18	ENSGT00950000183168.B.a #19	ENSGT00390000003312 #20	ENSGT00940000157582 #21	ENSGT00940000155543 #22	ENSGT00940000156139 #24	ENSGT00940000162094 #23	ENSGT00390000002144 #25	ENSGT00410000025596.a.b #26	ENSGT00940000156761 #27	ENSGT00940000157669 #28	ENSGT00940000157833 #29	ENSGT00530000063698.b	ENSGT00940000156213 #30	ENSGT00940000156592 #31	ENSGT00960000190201	ENSGT00940000157151 #32	ENSGT00940000159638 #33	ENSGT00940000153446.a.b	ENSGT00940000160209.f #34
Cetacea	ANCESTRAL SPECIES		ENSGT01000000214440.A.a.b.a #9	ENSGT00940000156115 #10	ENSGT00530000063770.c.a #11	ENSGT00390000010045.i #12	ENSGT00950000183182.a.a #13	ENSGT01090000260093.b #14	ENSGT00950000182978.B #15	ENSGT01060000248589.D #16	ENSGT00390000012569.a #17	ENSGT00390000006264 #18	ENSGT00950000183168.B.a #19	ENSGT00390000003312 #20	ENSGT00940000157582.d #21	ENSGT00390000010888.c.a.b	ENSGT00940000157582.c #21	ENSGT00940000155543 #22	ENSGT00940000156139 #24	ENSGT00940000162094 #23	ENSGT00390000002144.e.a #25	ENSGT00410000025596.a.b #26	ENSGT00940000156761 #27	ENSGT00940000157669 #28	ENSGT00940000157833 #29	ENSGT00530000063698.b	ENSGT00940000156213 #30	ENSGT00940000156592 #31	ENSGT00960000190201	ENSGT00940000157151 #32	ENSGT00940000159638 #33	ENSGT00940000153446.a.b	ENSGT00940000160209.f #34
Odontoceti	ANCESTRAL SPECIES		ENSGT01000000214440.A.a.b.a #9	ENSGT00940000156115 #10	ENSGT00530000063770.c.a #11	ENSGT00390000010045.i #12	ENSGT00950000183182.a.a #13	ENSGT01090000260093.b #14	ENSGT00950000182978.B #15	ENSGT01060000248589.D #16	ENSGT00390000012569.a #17	ENSGT00390000006264 #18	ENSGT00950000183168.B.a #19	ENSGT00390000003312 #20	ENSGT00940000157582.d #21	ENSGT00390000010888.c.a.b	ENSGT00940000157582.c #21	ENSGT00940000155543 #22	ENSGT00940000156139 #24	ENSGT00940000162094 #23	ENSGT00390000002144.e.a #25	ENSGT00410000025596.a.b #26	ENSGT00940000156761 #27	ENSGT00940000157669 #28	ENSGT00940000157833 #29	ENSGT00530000063698.b	ENSGT00940000156213 #30	ENSGT00940000156592 #31	ENSGT00940000157151 #32	ENSGT00940000159638 #33	ENSGT00940000153446.a.b	ENSGT00940000160209.f #34	ENSGT00940000158079 #35
Odontoceti_a	ANCESTRAL SPECIES		ENSGT01000000214440.A.a.b.a #9	ENSGT00940000156115 #10	ENSGT00530000063770.c.a #11	ENSGT00390000010045.i #12	ENSGT00950000183182.a.a #13	ENSGT01090000260093.b #14	ENSGT00950000182978.B #15	ENSGT01060000248589.D #16	ENSGT00390000012569.a #17	ENSGT00390000006264 #18	ENSGT00950000183168.B.a #19	ENSGT00390000003312 #20	ENSGT00940000157582.d #21	ENSGT00390000010888.c.a.b	ENSGT00940000157582.c #21	ENSGT00940000155543 #22	ENSGT00940000156139 #24	ENSGT00940000162094 #23	ENSGT00390000002144.e.a #25	ENSGT00410000025596.a.b #26	ENSGT00940000156761 #27	ENSGT00940000157669 #28	ENSGT00940000157833 #29	ENSGT00530000063698.b	ENSGT00940000156213 #30	ENSGT00940000156592 #31	ENSGT00940000157151 #32	ENSGT00940000159638 #33	ENSGT00940000153446.a.b	ENSGT00940000160209.f #34	ENSGT00940000158079 #35
Dolphin	MODERN SPECIES	269													SESN2 (ENSTTRG00000001847) #19	MED18 (ENSTTRG00000001851) #20	PHACTR4 (ENSTTRG00000001852) #21	RCC1 (ENSTTRG00000001853) #22	TRNAU1AP (ENSTTRG00000001854) #24	RAB42 (ENSTTRG00000001855) #23
Odontoceti_b	ANCESTRAL SPECIES		ENSGT00940000160073 #8	ENSGT01000000214440.A.a.b.a.a #9	ENSGT00940000156115 #10	ENSGT00530000063770.c.a #11	ENSGT00390000010045.i #12	ENSGT00950000183182.a.a #13	ENSGT01090000260093.b #14	ENSGT00950000182978.B #15	ENSGT01060000248589.D #16	ENSGT00390000012569.a #17	ENSGT00390000006264 #18	ENSGT00950000183168.B.a #19	ENSGT00390000003312 #20	ENSGT00390000010888.c.a.b	ENSGT00940000157582.c #21	ENSGT00940000155543 #22	ENSGT00940000156139 #24	ENSGT00940000162094 #23	ENSGT00390000002144.e.a #25	ENSGT00410000025596.a.b #26	ENSGT00940000156761 #27	ENSGT00940000157669 #28	ENSGT00940000157833 #29	ENSGT00530000063698.b	ENSGT00940000156213 #30	ENSGT00940000156592 #31	ENSGT00940000157151 #32	ENSGT00940000159638 #33	ENSGT00940000153446.a.b	ENSGT00940000160209.f #34	ENSGT00940000158079 #35
Monodontidae	ANCESTRAL SPECIES		ENSGT00940000156115 #10	ENSGT00530000063770.c.a #11	ENSGT00390000010045.i #12	ENSGT00950000183182.a.a #13	ENSGT01090000260093.b #14	ENSGT00950000182978.B #15	ENSGT00910000147719.b	ENSGT00390000006051.a.a.b	ENSGT01060000248589.D #16	ENSGT00390000012569.a #17	ENSGT00390000006264 #18	ENSGT00950000183168.B.a #19	ENSGT00390000003312 #20	ENSGT00390000010888.c.a.b	ENSGT00940000157582.c #21	ENSGT00940000155543 #22	ENSGT00940000156139 #24	ENSGT00940000162094 #23	ENSGT00390000002144.e.a #25	ENSGT00410000025596.a.b #26	ENSGT00940000156761 #27	ENSGT00940000157669 #28	ENSGT00940000157833 #29	ENSGT00530000063698.b	ENSGT00940000156213 #30	ENSGT00940000156592 #31	ENSGT00940000157151 #32	ENSGT00390000014084.ab.b.b	ENSGT00940000159638 #33	ENSGT00940000153446.a.b	ENSGT00940000160209.f #34
Narwhal	MODERN SPECIES	304	ENSMMNG00015005158 #9	PPP1R8 (ENSMMNG00015005107) #10	THEMIS2 (ENSMMNG00015013027) #11	ENSMMNG00015012999 #12	SMPDL3B (ENSMMNG00015012953) #13	XKR8 (ENSMMNG00015012929) #14	EYA3 (ENSMMNG00015012893) #15	ENSMMNG00015012858	ENSMMNG00015012849	DNAJC8 (ENSMMNG00015012830) #17	ATP5IF1 (ENSMMNG00015012814) #18	SESN2 (ENSMMNG00015012796) #19	MED18 (ENSMMNG00015012782) #20	ENSMMNG00015012774	PHACTR4 (ENSMMNG00015012730) #21	RCC1 (ENSMMNG00015012687) #22	TRNAU1AP (ENSMMNG00015012660) #24	RAB42 (ENSMMNG00015012631) #23	ENSMMNG00015012619 #25	GMEB1 (ENSMMNG00015012601) #26	YTHDF2 (ENSMMNG00015012587) #27	OPRD1 (ENSMMNG00015012577) #28	EPB41 (ENSMMNG00015012190) #29	TMEM200B (ENSMMNG00015012047)	SRSF4 (ENSMMNG00015012035) #30	MECR (ENSMMNG00015012012) #31	PTPRU (ENSMMNG00015011976) #32	ENSMMNG00015011944	MATN1 (ENSMMNG00015011923) #33	LAPTM5 (ENSMMNG00015011902)	SDC3 (ENSMMNG00015011885) #34
Beluga whale	MODERN SPECIES	51	PPP1R8 (ENSDLEG00000013472) #10	THEMIS2 (ENSDLEG00000013466) #11	ENSDLEG00000013454 #12	SMPDL3B (ENSDLEG00000013442) #13	XKR8 (ENSDLEG00000013433) #14	EYA3 (ENSDLEG00000013376) #15	ENSDLEG00000013366	ENSDLEG00000013354	PTAFR (ENSDLEG00000013349) #16	DNAJC8 (ENSDLEG00000013340) #17	ATPIF1 (ENSDLEG00000013329) #18	SESN2 (ENSDLEG00000013321) #19	MED18 (ENSDLEG00000013313) #20	ENSDLEG00000013302	PHACTR4 (ENSDLEG00000013189) #21	RCC1 (ENSDLEG00000013058) #22	ENSDLEG00000013043 #24	ENSDLEG00000013017 #24	RAB42 (ENSDLEG00000012981) #23	TAF12 (ENSDLEG00000012969) #25	GMEB1 (ENSDLEG00000012947) #26	YTHDF2 (ENSDLEG00000012942) #27	OPRD1 (ENSDLEG00000012901) #28	EPB41 (ENSDLEG00000012645) #29	TMEM200B (ENSDLEG00000012611)	SRSF4 (ENSDLEG00000012596) #30	MECR (ENSDLEG00000012578) #31	PTPRU (ENSDLEG00000009121) #32	ENSDLEG00000008516
Vaquita	MODERN SPECIES		FAM76A (ENSPSNG00000005498) #8	ENSPSNG00000005541 #9	PPP1R8 (ENSPSNG00000005558) #10	THEMIS2 (ENSPSNG00000005589) #11	PDCD2 (ENSPSNG00000005696)	RPA2 (ENSPSNG00000005730) #12	SMPDL3B (ENSPSNG00000005806) #13	XKR8 (ENSPSNG00000005907) #14	EYA3 (ENSPSNG00000005970) #15	PTAFR (ENSPSNG00000006046) #16	DNAJC8 (ENSPSNG00000006061) #17	ATP5IF1 (ENSPSNG00000006090) #18	SESN2 (ENSPSNG00000006125) #19	MED18 (ENSPSNG00000006165) #20	PHACTR4 (ENSPSNG00000006219) #21	RCC1 (ENSPSNG00000006328) #22	TRNAU1AP (ENSPSNG00000006381) #24	RAB42 (ENSPSNG00000006443) #23	TAF12 (ENSPSNG00000006469) #25	GMEB1 (ENSPSNG00000006512) #26	YTHDF2 (ENSPSNG00000006564) #27	ENSPSNG00000006599	OPRD1 (ENSPSNG00000006621) #28	EPB41 (ENSPSNG00000006874) #29	TMEM200B (ENSPSNG00000007470)	SRSF4 (ENSPSNG00000007490) #30	MECR (ENSPSNG00000007523) #31	PTPRU (ENSPSNG00000007606) #32	ENSPSNG00000007731	MATN1 (ENSPSNG00000007748) #33	LAPTM5 (ENSPSNG00000007821)
Sperm whale	MODERN SPECIES	14	FAM76A (ENSPCTG00005004465) #8	STX12 (ENSPCTG00005004417) #9	PPP1R8 (ENSPCTG00005004336) #10	THEMIS2 (ENSPCTG00005004296) #11	RPA2 (ENSPCTG00005004266) #12	SMPDL3B (ENSPCTG00005004166) #13	XKR8 (ENSPCTG00005004138) #14	EYA3 (ENSPCTG00005004066) #15	PTAFR (ENSPCTG00005004040) #16	DNAJC8 (ENSPCTG00005004028) #17	ATP5IF1 (ENSPCTG00005004015) #18	SESN2 (ENSPCTG00005003993) #19	MED18 (ENSPCTG00005003980) #20	ENSPCTG00005003963	PHACTR4 (ENSPCTG00005003932) #21	RCC1 (ENSPCTG00005003903) #22	TRNAU1AP (ENSPCTG00005003881) #24	RAB42 (ENSPCTG00005003870) #23	TAF12 (ENSPCTG00005003863) #25	GMEB1 (ENSPCTG00005003843) #26	YTHDF2 (ENSPCTG00005003821) #27	OPRD1 (ENSPCTG00005003815) #28	EPB41 (ENSPCTG00005002116) #29	TMEM200B (ENSPCTG00005001822)	SRSF4 (ENSPCTG00005001813) #30	MECR (ENSPCTG00005001799) #31	ENSPCTG00005001715 #32	ENSPCTG00005001668	MATN1 (ENSPCTG00005001649) #33	LAPTM5 (ENSPCTG00005001632)	ENSPCTG00005001624
Blue whale	MODERN SPECIES		STX12 (ENSBMSG00010000024) #9	PPP1R8 (ENSBMSG00010000031) #10	THEMIS2 (ENSBMSG00010000049) #11	ENSBMSG00010000072 #12	SMPDL3B (ENSBMSG00010000155) #13	XKR8 (ENSBMSG00010000229) #14	EYA3 (ENSBMSG00010000306) #15	PTAFR (ENSBMSG00010000435) #16	ENSBMSG00010000451	ENSBMSG00010000494	SESN2 (ENSBMSG00010000531) #19	ENSBMSG00010000561	MED18 (ENSBMSG00010000572) #20	ENSBMSG00010000590	ENSBMSG00010000628 #21	RCC1 (ENSBMSG00010000732) #22	TRNAU1AP (ENSBMSG00010000779) #24	ENSBMSG00010000789	RAB42 (ENSBMSG00010000837) #23	ENSBMSG00010000849 #25	GMEB1 (ENSBMSG00010000875) #26	YTHDF2 (ENSBMSG00010000900) #27	OPRD1 (ENSBMSG00010000919) #28	EPB41 (ENSBMSG00010001365) #29	TMEM200B (ENSBMSG00010004052)	SRSF4 (ENSBMSG00010004066) #30	MECR (ENSBMSG00010004086) #31	ENSBMSG00010004108	PTPRU (ENSBMSG00010004130) #32	ENSBMSG00010004192	MATN1 (ENSBMSG00010004210) #33
Pecora	ANCESTRAL SPECIES	16	ENSGT00940000163178	ENSGT00940000160073 #8	ENSGT01000000214440.A.a.b.a #9	ENSGT00940000156115 #10	ENSGT00530000063770.c.a #11	ENSGT00390000010045 #12	ENSGT00950000183182.a.a #13	ENSGT01090000260093.b #14	ENSGT00950000182978.B #15	ENSGT01060000248589.D #16	ENSGT00390000012569.a #17	ENSGT00390000006264.c #18	ENSGT00950000183168.B.a #19	ENSGT00390000003312 #20	ENSGT00940000157582 #21	ENSGT00940000155543 #22	ENSGT00940000156139 #24	ENSGT00940000162094 #23	ENSGT00390000002144 #25	ENSGT00410000025596.a.b #26	ENSGT00940000156761 #27	ENSGT00940000157669 #28	ENSGT00940000157833 #29	ENSGT00530000063698.b	ENSGT00940000156213 #30	ENSGT00940000156592 #31	ENSGT00940000157151 #32	ENSGT00940000159638 #33	ENSGT00940000153446.a.b	ENSGT00940000160209.f #34	ENSGT00940000158079 #35
Percora_a	ANCESTRAL SPECIES	5	ENSGT00940000163178	ENSGT00940000160073 #8	ENSGT01000000214440.A.a.b.a #9	ENSGT00940000156115 #10	ENSGT00530000063770.c.a #11	ENSGT00390000010045 #12	ENSGT00950000183182.a.a #13	ENSGT01090000260093.b #14	ENSGT00950000182978.B #15	ENSGT01060000248589.D #16	ENSGT00390000012569.a #17	ENSGT00390000006264.c #18	ENSGT00950000183168.B.a #19	ENSGT00390000003312 #20	ENSGT00940000157582 #21	ENSGT00940000155543 #22	ENSGT00940000156139 #24	ENSGT00940000162094 #23	ENSGT00390000002144 #25	ENSGT00410000025596.a.b #26	ENSGT00940000156761 #27	ENSGT00940000157669 #28	ENSGT00940000157833 #29	ENSGT00530000063698.b	ENSGT00940000156213 #30	ENSGT00940000156592 #31	ENSGT00940000157151 #32	ENSGT00940000159638 #33	ENSGT00940000153446.a.b	ENSGT00940000160209.f #34	ENSGT00940000158079 #35
Bovidae	ANCESTRAL SPECIES	8	ENSGT00940000163178	ENSGT00940000160073 #8	ENSGT01000000214440.A.a.b.a #9	ENSGT00940000156115 #10	ENSGT00530000063770.c.a #11	ENSGT00390000010045.k #12	ENSGT00950000183182.a.a #13	ENSGT01090000260093.b #14	ENSGT00950000182978.B #15	ENSGT01060000248589.D #16	ENSGT00390000012569.a #17	ENSGT00390000006264.c #18	ENSGT00950000183168.B.a #19	ENSGT00390000003312 #20	ENSGT00940000157582 #21	ENSGT00940000155543 #22	ENSGT00940000156139 #24	ENSGT00940000162094 #23	ENSGT00390000002144 #25	ENSGT00410000025596.a.b #26	ENSGT00940000156761 #27	ENSGT00940000157669 #28	ENSGT00940000157833 #29	ENSGT00530000063698.b	ENSGT00940000156213 #30	ENSGT00940000156592 #31	ENSGT00940000157151 #32	ENSGT00940000159638 #33	ENSGT00940000153446.a.b	ENSGT00940000160209.f #34	ENSGT00940000158079 #35
Caprinae	ANCESTRAL SPECIES	5	ENSGT00940000163178	ENSGT00940000160073 #8	ENSGT01000000214440.A.a.b.a #9	ENSGT00940000156115 #10	ENSGT00530000063770.c.a #11	ENSGT00390000010045.l #12	ENSGT00950000183182.a.a #13	ENSGT01090000260093.b #14	ENSGT00950000182978.B #15	ENSGT01060000248589.D #16	ENSGT00390000012569.a #17	ENSGT00390000006264.c #18	ENSGT00950000183168.B.a #19	ENSGT00390000003312 #20	ENSGT00940000157582 #21	ENSGT00940000155543 #22	ENSGT00940000156139 #24	ENSGT00940000162094 #23	ENSGT00390000002144 #25	ENSGT00410000025596.a.b #26	ENSGT00940000156761 #27	ENSGT00940000157669 #28	ENSGT00940000157833 #29	ENSGT00530000063698.b	ENSGT00940000156213 #30	ENSGT00940000156592 #31	ENSGT00940000157151 #32	ENSGT00940000159638 #33	ENSGT00940000153446.a.b	ENSGT00940000160209.f #34	ENSGT00940000158079 #35
Goat	MODERN SPECIES	11	IFI6 (ENSCHIG00000017858)	FAM76A (ENSCHIG00000010125) #8	STX12 (ENSCHIG00000024442) #9	PPP1R8 (ENSCHIG00000024272) #10	THEMIS2 (ENSCHIG00000012658) #11	RPA2 (ENSCHIG00000018966) #12	SMPDL3B (ENSCHIG00000014109) #13	XKR8 (ENSCHIG00000026584) #14	EYA3 (ENSCHIG00000026543) #15	PTAFR (ENSCHIG00000012038) #16	ENSCHIG00000026518 #17	ATP5IF1 (ENSCHIG00000007574) #18	SESN2 (ENSCHIG00000023698) #19	MED18 (ENSCHIG00000020083) #20	PHACTR4 (ENSCHIG00000017217) #21	RCC1 (ENSCHIG00000026944) #22	TRNAU1AP (ENSCHIG00000023215) #24	ENSCHIG00000015067	RAB42 (ENSCHIG00000023710) #23	TAF12 (ENSCHIG00000002588) #25	GMEB1 (ENSCHIG00000000629) #26	YTHDF2 (ENSCHIG00000022985) #27	OPRD1 (ENSCHIG00000016495) #28	EPB41 (ENSCHIG00000014338) #29	TMEM200B (ENSCHIG00000005464)	SRSF4 (ENSCHIG00000022096) #30	MECR (ENSCHIG00000007022) #31	PTPRU (ENSCHIG00000018867) #32	MATN1 (ENSCHIG00000008350) #33	LAPTM5 (ENSCHIG00000013968)	ENSCHIG00000015655 #34
Rambouillet Sheep	MODERN SPECIES	11	IFI6 (ENSOARG00020021024)	FAM76A (ENSOARG00020020517) #8	STX12 (ENSOARG00020020460) #9	PPP1R8 (ENSOARG00020020388) #10	THEMIS2 (ENSOARG00020020351) #11	RPA2 (ENSOARG00020020276) #12	SMPDL3B (ENSOARG00020020126) #13	XKR8 (ENSOARG00020020079) #14	EYA3 (ENSOARG00020019284) #15	ENSOARG00020019236	DNAJC8 (ENSOARG00020019115) #17	ATP5IF1 (ENSOARG00020019017) #18	SESN2 (ENSOARG00020018898) #19	MED18 (ENSOARG00020018864) #20	PHACTR4 (ENSOARG00020018486) #21	RCC1 (ENSOARG00020018293) #22	TRNAU1AP (ENSOARG00020018238) #24	RAB42 (ENSOARG00020018146) #23	ENSOARG00020018108 #25	ENSOARG00020018054	GMEB1 (ENSOARG00020017971) #26	YTHDF2 (ENSOARG00020017875) #27	OPRD1 (ENSOARG00020017834) #28	EPB41 (ENSOARG00020015888) #29	TMEM200B (ENSOARG00020015783)	SRSF4 (ENSOARG00020015684) #30	MECR (ENSOARG00020015587) #31	PTPRU (ENSOARG00020014061) #32	MATN1 (ENSOARG00020013966) #33	LAPTM5 (ENSOARG00020013915)	SDC3 (ENSOARG00020013780) #34
Bovinae	ANCESTRAL SPECIES	5	ENSGT00940000160073 #8	ENSGT01000000214440.A.a.b.a #9	ENSGT00940000156115 #10	ENSGT00530000063770.c.a #11	ENSGT00390000010045.k.b #12	ENSGT00950000183182.a.a #13	ENSGT01090000260093.b #14	ENSGT00950000182978.B #15	ENSGT01060000248589.D #16	ENSGT00390000012569.a #17	ENSGT00390000006264.c #18	ENSGT00950000183168.B.a #19	ENSGT00390000003312 #20	ENSGT00390000006707.r.h	ENSGT00940000157582 #21	ENSGT00940000155543 #22	ENSGT00940000156139 #24	ENSGT00940000162094 #23	ENSGT00390000002144.i.a #25	ENSGT00410000025596.a.b #26	ENSGT00940000156761 #27	ENSGT00940000157669 #28	ENSGT00940000157833 #29	ENSGT00530000063698.b	ENSGT00940000156213 #30	ENSGT00940000156592 #31	ENSGT00940000157151 #32	ENSGT00940000159638 #33	ENSGT00940000153446.a.b	ENSGT00940000160209.f #34	ENSGT00940000158079 #35
Bos	ANCESTRAL SPECIES	6	ENSGT01000000214440.A.a.b.a #9	ENSGT00940000156115 #10	ENSGT00530000063770.c.a #11	ENSGT00390000010045.k.b #12	ENSGT00950000183182.a.a #13	ENSGT01090000260093.b #14	ENSGT00950000182978.B #15	ENSGT01060000248589.D #16	ENSGT00390000012569.a #17	ENSGT00390000006264.c #18	ENSGT00950000183168.B.a #19	ENSGT00390000003312 #20	ENSGT00390000015797.d.r.b.b	ENSGT00390000006707.r.h	ENSGT00940000157582 #21	ENSGT00940000155543 #22	ENSGT00940000156139 #24	ENSGT00940000162094 #23	ENSGT00390000002144.j #25	ENSGT00410000025596.a.b #26	ENSGT00940000156761 #27	ENSGT00940000157669 #28	ENSGT00940000157833 #29	ENSGT00530000063698.b	ENSGT00940000156213 #30	ENSGT00940000156592 #31	ENSGT00940000157151 #32	ENSGT00940000159638 #33	ENSGT00940000153446.a.b	ENSGT00940000160209.f #34	ENSGT00940000158079 #35
Bos_b	ANCESTRAL SPECIES	20	ENSGT01000000214440.A.a.b.a #9	ENSGT00940000156115 #10	ENSGT00530000063770.c.a #11	ENSGT00390000010045.k.b #12	ENSGT00950000183182.a.a #13	ENSGT01090000260093.b #14	ENSGT00950000182978.B #15	ENSGT01060000248589.D #16	ENSGT00390000012569.a #17	ENSGT00390000006264.c #18	ENSGT00950000183168.B.a #19	ENSGT00390000003312 #20	ENSGT00390000015797.d.r.b.b	ENSGT00390000006707.r.h	ENSGT00940000157582 #21	ENSGT00940000155543 #22	ENSGT00940000156139 #24	ENSGT00920000150755	ENSGT01100000263480.a.a.b.b.b.a.a.a.a.a.b.a.a.b.b.a.a.a.a.b.b	ENSGT00940000162094 #23	ENSGT00390000002144.j #25	ENSGT00410000025596.a.b #26	ENSGT00940000156761 #27	ENSGT00940000157669 #28	ENSGT00940000157833 #29	ENSGT00530000063698.b	ENSGT00940000156213 #30	ENSGT00940000156592 #31	ENSGT00940000157151 #32	ENSGT00390000007797.a.a	ENSGT00940000159638 #33
Cow	MODERN SPECIES	11	STX12 (ENSBTAG00000001192) #9	PPP1R8 (ENSBTAG00000003866) #10	THEMIS2 (ENSBTAG00000006223) #11	RPA2 (ENSBTAG00000006225) #12	SMPDL3B (ENSBTAG00000012997) #13	XKR8 (ENSBTAG00000008800) #14	EYA3 (ENSBTAG00000043989) #15	PTAFR (ENSBTAG00000027051) #16	DNAJC8 (ENSBTAG00000018385) #17	ATP5IF1 (ENSBTAG00000006342) #18	SESN2 (ENSBTAG00000002363) #19	MED18 (ENSBTAG00000002678) #20	ENSBTAG00000040210	ENSBTAG00000003676	PHACTR4 (ENSBTAG00000002727) #21	RCC1 (ENSBTAG00000003788) #22	TRNAU1AP (ENSBTAG00000010393) #24	ENSBTAG00000048228	ENSBTAG00000052614	RAB42 (ENSBTAG00000021525) #23	TAF12 (ENSBTAG00000026660) #25	GMEB1 (ENSBTAG00000001160) #26	YTHDF2 (ENSBTAG00000015771) #27	OPRD1 (ENSBTAG00000003202) #28	EPB41 (ENSBTAG00000006667) #29	TMEM200B (ENSBTAG00000047524)	SRSF4 (ENSBTAG00000013309) #30	MECR (ENSBTAG00000017253) #31	PTPRU (ENSBTAG00000012848) #32	ENSBTAG00000053024	MATN1 (ENSBTAG00000003479) #33
Hybrid Bos Indicus	MODERN SPECIES	11	PPP1R8 (ENSBIXG00005000665) #10	THEMIS2 (ENSBIXG00005009901) #11	ENSBIXG00005009925 #12	SMPDL3B (ENSBIXG00005009947) #13	XKR8 (ENSBIXG00005005690) #14	EYA3 (ENSBIXG00005000796) #15	PTAFR (ENSBIXG00005000806) #16	ENSBIXG00005010236	DNAJC8 (ENSBIXG00005010254) #17	ATP5IF1 (ENSBIXG00005000831) #18	SESN2 (ENSBIXG00005000853) #19	MED18 (ENSBIXG00005010361) #20	ENSBIXG00005010380	ENSBIXG00005010390	PHACTR4 (ENSBIXG00005000752) #21	RCC1 (ENSBIXG00005010509) #22	TRNAU1AP (ENSBIXG00005000707) #24	ENSBIXG00005010590	RAB42 (ENSBIXG00005000908) #23	TAF12 (ENSBIXG00005000915) #25	GMEB1 (ENSBIXG00005010684) #26	YTHDF2 (ENSBIXG00005000620) #27	OPRD1 (ENSBIXG00005010747) #28	EPB41 (ENSBIXG00005010985) #29	TMEM200B (ENSBIXG00005007469)	SRSF4 (ENSBIXG00005011082) #30	MECR (ENSBIXG00005007751) #31	PTPRU (ENSBIXG00005001071) #32	ENSBIXG00005011338	MATN1 (ENSBIXG00005001095) #33	LAPTM5 (ENSBIXG00005011398)
Bos_a	ANCESTRAL SPECIES	4	ENSGT00940000156115 #10	ENSGT00530000063770.c.a #11	ENSGT00390000010045.k.b #12	ENSGT00950000183182.a.a #13	ENSGT01090000260093.b #14	ENSGT00950000182978.B #15	ENSGT00910000147719.b	ENSGT01060000248589.D #16	ENSGT00390000012569.a #17	ENSGT00390000006264.c #18	ENSGT00950000183168.B.a #19	ENSGT00390000003312 #20	ENSGT00390000015797.d.r.b.b	ENSGT00390000006707.r.h	ENSGT00940000157582 #21	ENSGT00940000155543 #22	ENSGT00940000156139 #24	ENSGT00940000162094 #23	ENSGT00390000002144.j #25	ENSGT00410000025596.a.b #26	ENSGT01100000263839	ENSGT00940000156761 #27	ENSGT00940000157669 #28	ENSGT00940000157833 #29	ENSGT00530000063698.b	ENSGT00940000156213 #30	ENSGT00940000156592 #31	ENSGT00940000157151 #32	ENSGT00940000159638 #33	ENSGT00940000153446.a.b	ENSGT00940000160209.f #34
Domestic yak	MODERN SPECIES	11	THEMIS2 (ENSBGRG00000012596) #11	ENSBGRG00000012694 #11	ENSBGRG00000012726 #12	SMPDL3B (ENSBGRG00000012884) #13	XKR8 (ENSBGRG00000013224) #14	EYA3 (ENSBGRG00000013293) #15	ENSBGRG00000013691	PTAFR (ENSBGRG00000013703) #16	DNAJC8 (ENSBGRG00000013806) #17	ATP5IF1 (ENSBGRG00000013915) #18	SESN2 (ENSBGRG00000014010) #19	MED18 (ENSBGRG00000014253) #20	ENSBGRG00000014301	PHACTR4 (ENSBGRG00000014359) #21	ENSBGRG00000014684	RCC1 (ENSBGRG00000014760) #22	TRNAU1AP (ENSBGRG00000014936) #24	RAB42 (ENSBGRG00000015211) #23	TAF12 (ENSBGRG00000015289) #25	GMEB1 (ENSBGRG00000015362) #26	ENSBGRG00000015523	ENSBGRG00000015547	YTHDF2 (ENSBGRG00000015573) #27	OPRD1 (ENSBGRG00000015656) #28	EPB41 (ENSBGRG00000016000) #29	TMEM200B (ENSBGRG00000021675)	SRSF4 (ENSBGRG00000021699) #30	MECR (ENSBGRG00000021789) #31	PTPRU (ENSBGRG00000021855) #32	MATN1 (ENSBGRG00000022057) #33	LAPTM5 (ENSBGRG00000022099)
Wild yak	MODERN SPECIES	762	PPP1R8 (ENSBMUG00000017340) #10	THEMIS2 (ENSBMUG00000017367) #11	ENSBMUG00000017390 #12	SMPDL3B (ENSBMUG00000017413) #13	XKR8 (ENSBMUG00000017423) #14	EYA3 (ENSBMUG00000017528) #15	ENSBMUG00000017537	PTAFR (ENSBMUG00000017560) #16	DNAJC8 (ENSBMUG00000017600) #17	ATP5IF1 (ENSBMUG00000017659) #18	SESN2 (ENSBMUG00000017686) #19	MED18 (ENSBMUG00000017697) #20	ENSBMUG00000017712	ENSBMUG00000017722	PHACTR4 (ENSBMUG00000017790) #21	RCC1 (ENSBMUG00000017936) #22	RAB42 (ENSBMUG00000018007) #23
American bison	MODERN SPECIES	3363	STX12 (ENSBBBG00000013509) #9	PPP1R8 (ENSBBBG00000013499) #10	THEMIS2 (ENSBBBG00000013489) #11	ENSBBBG00000013481 #12	SMPDL3B (ENSBBBG00000013467) #13	XKR8 (ENSBBBG00000013441) #14	EYA3 (ENSBBBG00000013430) #15	PTAFR (ENSBBBG00000002716) #16	ENSBBBG00000013333	DNAJC8 (ENSBBBG00000001607) #17	ATP5IF1 (ENSBBBG00000013307) #18	SESN2 (ENSBBBG00000013292) #19	MED18 (ENSBBBG00000013284) #20	ENSBBBG00000013274	PHACTR4 (ENSBBBG00000013267) #21	RCC1 (ENSBBBG00000002666) #22	TRNAU1AP (ENSBBBG00000013165) #24	RAB42 (ENSBBBG00000013149) #23	ENSBBBG00000013138 #25	GMEB1 (ENSBBBG00000013129) #26	YTHDF2 (ENSBBBG00000001673) #27	OPRD1 (ENSBBBG00000001678) #28	EPB41 (ENSBBBG00000008324) #29	TMEM200B (ENSBBBG00000002306)	SRSF4 (ENSBBBG00000012247) #30	MECR (ENSBBBG00000012215) #31	PTPRU (ENSBBBG00000002295) #32
Siberian musk deer	MODERN SPECIES	353															PHACTR4 (ENSMMSG00000017698) #21	RCC1 (ENSMMSG00000017577) #22	TRNAU1AP (ENSMMSG00000017547) #24	RAB42 (ENSMMSG00000017511) #23	TAF12 (ENSMMSG00000017482) #25	GMEB1 (ENSMMSG00000017411) #26	YTHDF2 (ENSMMSG00000017379) #27	OPRD1 (ENSMMSG00000017354) #28	EPB41 (ENSMMSG00000009727) #29	TMEM200B (ENSMMSG00000009448)	SRSF4 (ENSMMSG00000009418) #30	MECR (ENSMMSG00000009362) #31	PTPRU (ENSMMSG00000009248) #32	ENSMMSG00000009209	MATN1 (ENSMMSG00000009155) #33	LAPTM5 (ENSMMSG00000009109)	SDC3 (ENSMMSG00000009056) #34
Yarkand deer	DUPLICATION
Yarkand deer	MODERN SPECIES	31	PPP1R8 (ENSCHYG00000002883) #10	ENSCHYG00000002910	THEMIS2 (ENSCHYG00000002918) #11	RPA2 (ENSCHYG00000002933) #12	SMPDL3B (ENSCHYG00000002959) #13	XKR8 (ENSCHYG00000002982) #14	EYA3 (ENSCHYG00000003037) #15	DNAJC8 (ENSCHYG00000003338) #17	ENSCHYG00000003358 #18	SESN2 (ENSCHYG00000003372) #19	MED18 (ENSCHYG00000003395) #20	ENSCHYG00000003407	PHACTR4 (ENSCHYG00000003443) #21	ENSCHYG00000003581	ENSCHYG00000003590	ENSCHYG00000003628 #22	ENSCHYG00000003649 #24	RAB42 (ENSCHYG00000003707) #23	TAF12 (ENSCHYG00000003724) #25	GMEB1 (ENSCHYG00000005760) #26	YTHDF2 (ENSCHYG00000005845) #27	OPRD1 (ENSCHYG00000005893) #28	EPB41 (ENSCHYG00000006045) #29	TMEM200B (ENSCHYG00000006532)	SRSF4 (ENSCHYG00000006560) #30	MECR (ENSCHYG00000006636) #31	PTPRU (ENSCHYG00000006797) #32	MATN1 (ENSCHYG00000006958) #33	LAPTM5 (ENSCHYG00000006997)	SDC3 (ENSCHYG00000007038) #34	PUM1 (ENSCHYG00000007161) #35
Yarkand deer	MODERN SPECIES	25	SMIM18 (ENSCHYG00000023176)	ENSCHYG00000023201	UBXN8 (ENSCHYG00000023355)	PPP2CB (ENSCHYG00000014632)	TEX15 (ENSCHYG00000014679)	PURG (ENSCHYG00000014784)	ENSCHYG00000014838	WRN (ENSCHYG00000014889)	NRG1 (ENSCHYG00000015541)	FUT10 (ENSCHYG00000018055)	MAK16 (ENSCHYG00000018167)	TTI2 (ENSCHYG00000018334)	ENSCHYG00000018522	DUSP26 (ENSCHYG00000018592)	ENSCHYG00000018716	ENSCHYG00000018760 #22	ENSCHYG00000018822	UNC5D (ENSCHYG00000018964)	KCNU1 (ENSCHYG00000021033)	ZNF703 (ENSCHYG00000021337)	ERLIN2 (ENSCHYG00000021368)	ENSCHYG00000021435	ADGRA2 (ENSCHYG00000021519)	BRF2 (ENSCHYG00000021983)	RAB11FIP1 (ENSCHYG00000022023)	GOT1L1 (ENSCHYG00000022122)	ADRB3 (ENSCHYG00000022213)	EIF4EBP1 (ENSCHYG00000022296)	ASH2L (ENSCHYG00000022353)	STAR (ENSCHYG00000022561)	LSM1 (ENSCHYG00000022614)
Camelidae	ANCESTRAL SPECIES	3	ENSGT00940000163178	ENSGT00940000160073 #8	ENSGT01000000214440.A.a.b.a #9	ENSGT00940000156115 #10	ENSGT00530000063770.c.a #11	ENSGT00390000010045 #12	ENSGT00950000183182.a.a #13	ENSGT01090000260093.b #14	ENSGT00950000182978.B #15	ENSGT01060000248589.D #16	ENSGT00390000012569.a #17	ENSGT00390000006264 #18	ENSGT00950000183168.B.a #19	ENSGT00390000003312 #20	ENSGT00940000157582 #21	ENSGT00940000155543 #22	ENSGT00940000156139 #24	ENSGT00940000162094 #23	ENSGT00390000002144 #25	ENSGT00410000025596.a.b #26	ENSGT00940000156761 #27	ENSGT00940000157669 #28	ENSGT00940000157833 #29	ENSGT00530000063698.b	ENSGT00940000156213 #30	ENSGT00950000185227	ENSGT00940000156592 #31	ENSGT00940000157151 #32	ENSGT00940000159638 #33	ENSGT00940000153446.a.b	ENSGT00940000160209.f #34
Arabian camel	MODERN SPECIES	4	IFI6 (ENSCDRG00005007894)	FAM76A (ENSCDRG00005007930) #8	STX12 (ENSCDRG00005008126) #9	PPP1R8 (ENSCDRG00005008155) #10	THEMIS2 (ENSCDRG00005008258) #11	RPA2 (ENSCDRG00005008368) #12	SMPDL3B (ENSCDRG00005008566) #13	XKR8 (ENSCDRG00005008698) #14	EYA3 (ENSCDRG00005008747) #15	PTAFR (ENSCDRG00005009309) #16	DNAJC8 (ENSCDRG00005009348) #17	ATP5IF1 (ENSCDRG00005009468) #18	SESN2 (ENSCDRG00005009534) #19	MED18 (ENSCDRG00005009647) #20	PHACTR4 (ENSCDRG00005009702) #21	RCC1 (ENSCDRG00005009898) #22	TRNAU1AP (ENSCDRG00005010166) #24	RAB42 (ENSCDRG00005006688) #23	TAF12 (ENSCDRG00005006753) #25	GMEB1 (ENSCDRG00005006797) #26	YTHDF2 (ENSCDRG00005006917) #27	OPRD1 (ENSCDRG00005006966) #28	EPB41 (ENSCDRG00005007158) #29	TMEM200B (ENSCDRG00005014903)	SRSF4 (ENSCDRG00005014921) #30	ENSCDRG00005014957	MECR (ENSCDRG00005014978) #31	PTPRU (ENSCDRG00005015095) #32	MATN1 (ENSCDRG00005015422) #33	LAPTM5 (ENSCDRG00005015458)	SDC3 (ENSCDRG00005015511) #34
Alpaca	MODERN SPECIES	251												DNAJC8 (ENSVPAG00000006767) #17	SESN2 (ENSVPAG00000006769) #19	MED18 (ENSVPAG00000006773) #20	PHACTR4 (ENSVPAG00000006775) #21	RCC1 (ENSVPAG00000006776) #22	TRNAU1AP (ENSVPAG00000006778) #24	TAF12 (ENSVPAG00000006779) #25	ENSVPAG00000006780	GMEB1 (ENSVPAG00000006781) #26	YTHDF2 (ENSVPAG00000006783) #27
Laurasiatheria_b	ANCESTRAL SPECIES		ENSGT00940000163178	ENSGT00940000160073 #8	ENSGT01000000214440.A.a.b.a #9	ENSGT00940000156115 #10	ENSGT00530000063770.c.a #11	ENSGT00390000010045 #12	ENSGT00950000183182.a.a #13	ENSGT01090000260093.b #14	ENSGT00950000182978.B #15	ENSGT01060000248589.D #16	ENSGT00390000012569.a #17	ENSGT00390000006264 #18	ENSGT00950000183168.B.a #19	ENSGT00390000003312 #20	ENSGT00940000157582 #21	ENSGT00940000155543 #22	ENSGT00940000156139 #24	ENSGT00940000162094 #23	ENSGT00940000164873	ENSGT00390000002144 #25	ENSGT00410000025596.a.b #26	ENSGT01100000263839	ENSGT00940000156761 #27	ENSGT00940000157669 #28	ENSGT00940000157833 #29	ENSGT00530000063698.b	ENSGT00940000156213 #30	ENSGT00950000185227	ENSGT00940000156592 #31	ENSGT00960000190201	ENSGT00940000157151 #32
Carnivora	ANCESTRAL SPECIES	1	ENSGT00940000163178	ENSGT00940000160073 #8	ENSGT01000000214440.A.a.b.a #9	ENSGT00940000156115 #10	ENSGT00530000063770.c.a #11	ENSGT00390000010045 #12	ENSGT00950000183182.a.a #13	ENSGT01090000260093.b #14	ENSGT00950000182978.B #15	ENSGT01060000248589.D #16	ENSGT00390000012569.a #17	ENSGT00390000006264 #18	ENSGT00950000183168.B.a #19	ENSGT00390000003312 #20	ENSGT00940000157582 #21	ENSGT00940000155543 #22	ENSGT00940000156139 #24	ENSGT00940000162094 #23	ENSGT00390000002144 #25	ENSGT00410000025596.a.b #26	ENSGT01100000263839	ENSGT00940000156761 #27	ENSGT00940000157669 #28	ENSGT00940000157833 #29	ENSGT00530000063698.b	ENSGT00940000156213 #30	ENSGT00950000185227	ENSGT00940000156592 #31	ENSGT00960000190201	ENSGT00940000157151 #32	ENSGT00940000159638 #33
Caniformia	ANCESTRAL SPECIES	2	ENSGT00940000163178	ENSGT00940000160073 #8	ENSGT01000000214440.A.a.b.a #9	ENSGT00940000156115 #10	ENSGT00530000063770.c.a #11	ENSGT00390000010045 #12	ENSGT00950000183182.a.a #13	ENSGT01090000260093.b #14	ENSGT00950000182978.B #15	ENSGT01060000248589.D #16	ENSGT00390000012569.a #17	ENSGT00390000006264 #18	ENSGT00950000183168.B.a #19	ENSGT00390000003312 #20	ENSGT00940000157582 #21	ENSGT00940000155543 #22	ENSGT00940000156139 #24	ENSGT00940000162094 #23	ENSGT00390000002144 #25	ENSGT00410000025596.a.b #26	ENSGT01100000263839	ENSGT00940000156761 #27	ENSGT00940000157669 #28	ENSGT00940000157833 #29	ENSGT00530000063698.b	ENSGT00940000156213 #30	ENSGT00950000185227	ENSGT00940000156592 #31	ENSGT00960000190201	ENSGT00940000157151 #32	ENSGT00940000159638 #33
Caniformia_b	ANCESTRAL SPECIES	1	ENSGT00940000163178	ENSGT00940000160073 #8	ENSGT01000000214440.A.a.b.a #9	ENSGT00940000156115 #10	ENSGT00530000063770.c.a #11	ENSGT00390000010045 #12	ENSGT00950000183182.a.a #13	ENSGT01090000260093.b #14	ENSGT00950000182978.B #15	ENSGT01060000248589.D #16	ENSGT00390000012569.a #17	ENSGT00390000006264 #18	ENSGT00950000183168.B.a #19	ENSGT00390000003312 #20	ENSGT00940000157582 #21	ENSGT00940000155543 #22	ENSGT00940000156139 #24	ENSGT00940000162094 #23	ENSGT00390000002144 #25	ENSGT00410000025596.a.b #26	ENSGT00940000156761 #27	ENSGT00940000157669 #28	ENSGT00940000157833 #29	ENSGT00530000063698.b	ENSGT00940000156213 #30	ENSGT00940000156592 #31	ENSGT00960000190201	ENSGT00940000157151 #32	ENSGT00940000159638 #33	ENSGT00940000153446.a.b	ENSGT00940000160209 #34
Mustelinae	ANCESTRAL SPECIES		ENSGT00940000163178	ENSGT00940000160073 #8	ENSGT01000000214440.A.a.b.a #9	ENSGT00940000156115 #10	ENSGT00530000063770.c.a #11	ENSGT00390000010045 #12	ENSGT00950000183182.a.a #13	ENSGT01090000260093.b #14	ENSGT00950000182978.B #15	ENSGT01060000248589.D #16	ENSGT00390000012569.a #17	ENSGT00390000006264 #18	ENSGT00950000183168.B.a #19	ENSGT00390000003312 #20	ENSGT00940000157582 #21	ENSGT00940000155543 #22	ENSGT00940000156139 #24	ENSGT00940000162094 #23	ENSGT00390000002144 #25	ENSGT00410000025596.a.b #26	ENSGT00940000156761 #27	ENSGT00940000157669 #28	ENSGT00940000157833 #29	ENSGT00530000063698.b	ENSGT00940000156213 #30	ENSGT00940000156592 #31	ENSGT00940000157151 #32	ENSGT00940000159638 #33	ENSGT00940000153446.a.b	ENSGT00940000160209 #34	ENSGT00940000158079 #35
Ferret	MODERN SPECIES	167	ENSMPUG00000015599	FAM76A (ENSMPUG00000015579) #8	STX12 (ENSMPUG00000015578) #9	PPP1R8 (ENSMPUG00000015577) #10	THEMIS2 (ENSMPUG00000015575) #11	RPA2 (ENSMPUG00000015563) #12	SMPDL3B (ENSMPUG00000015553) #13	XKR8 (ENSMPUG00000015551) #14	EYA3 (ENSMPUG00000015548) #15	PTAFR (ENSMPUG00000018809) #16	DNAJC8 (ENSMPUG00000015540) #17	ATP5IF1 (ENSMPUG00000015536) #18	SESN2 (ENSMPUG00000015535) #19	MED18 (ENSMPUG00000015531) #20	PHACTR4 (ENSMPUG00000015529) #21	RCC1 (ENSMPUG00000015528) #22	TRNAU1AP (ENSMPUG00000015511) #24	RAB42 (ENSMPUG00000015508) #23	TAF12 (ENSMPUG00000015506) #25	GMEB1 (ENSMPUG00000015503) #26	YTHDF2 (ENSMPUG00000015501) #27	ENSMPUG00000015500	OPRD1 (ENSMPUG00000015498) #28	EPB41 (ENSMPUG00000015472) #29	SRSF4 (ENSMPUG00000015470) #30	MECR (ENSMPUG00000015468) #31	PTPRU (ENSMPUG00000015467) #32	ENSMPUG00000015464	MATN1 (ENSMPUG00000015461) #33	LAPTM5 (ENSMPUG00000015459)	SDC3 (ENSMPUG00000015458) #34
American mink	MODERN SPECIES	9	FAM76A (ENSNVIG00000023798) #8	STX12 (ENSNVIG00000023800) #9	PP1R8 (ENSNVIG00000023801) #10	THEMIS2 (ENSNVIG00000023803) #11	RPA2 (ENSNVIG00000023804) #12	SMPDL3B (ENSNVIG00000023805) #13	XKR8 (ENSNVIG00000023806) #14	EYA3 (ENSNVIG00000023808) #15	PTAFR (ENSNVIG00000023812) #16	DNAJC8 (ENSNVIG00000023813) #17	ATP5IF1 (ENSNVIG00000023815) #18	SESN2 (ENSNVIG00000023817) #19	MED18 (ENSNVIG00000023819) #20	PHACTR4 (ENSNVIG00000023821) #21	ENSNVIG00000023825	RCC1 (ENSNVIG00000023830) #22	TRNAU1AP (ENSNVIG00000023833) #24	RAB42 (ENSNVIG00000023841) #23	TAF12 (ENSNVIG00000023844) #25	GMEB1 (ENSNVIG00000023847) #26	YTHDF2 (ENSNVIG00000023849) #27	OPRD1 (ENSNVIG00000023851) #28	EPB41 (ENSNVIG00000023862) #29	TMEM200B (ENSNVIG00000024049)	SRSF4 (ENSNVIG00000024050) #30	MECR (ENSNVIG00000024055) #31	PTPRU (ENSNVIG00000024060) #32	ENSNVIG00000024069	MATN1 (ENSNVIG00000024071) #33	LAPM5 (ENSNVIG00000024073)	SDC3 (ENSNVIG00000024078) #34
Ursidae	ANCESTRAL SPECIES		ENSGT00940000163178	ENSGT00940000160073 #8	ENSGT01000000214440.A.a.b.a #9	ENSGT00940000156115 #10	ENSGT00530000063770.c.a #11	ENSGT00390000010045 #12	ENSGT00950000183182.a.a #13	ENSGT01090000260093.b #14	ENSGT00950000182978.B #15	ENSGT01060000248589.D #16	ENSGT00390000012569.a #17	ENSGT00390000006264 #18	ENSGT00950000183168.B.a #19	ENSGT00390000003312 #20	ENSGT00940000157582 #21	ENSGT00940000155543 #22	ENSGT00940000156139 #24	ENSGT00940000162094 #23	ENSGT00390000002144 #25	ENSGT00410000025596.a.b #26	ENSGT00940000156761 #27	ENSGT00940000157669 #28	ENSGT00940000157833 #29	ENSGT00530000063698.b	ENSGT00390000000885.b	ENSGT00940000156213 #30	ENSGT00940000156592 #31	ENSGT00960000190201	ENSGT00940000157151 #32	ENSGT00940000159638 #33	ENSGT00940000153446.a.b
Ursus	ANCESTRAL SPECIES		ENSGT00940000163178	ENSGT00940000160073 #8	ENSGT01000000214440.A.a.b.a #9	ENSGT00940000156115 #10	ENSGT00530000063770.c.a #11	ENSGT00390000010045 #12	ENSGT00950000183182.a.a #13	ENSGT01090000260093.b #14	ENSGT00950000182978.B #15	ENSGT01060000248589.D #16	ENSGT00390000012569.a #17	ENSGT00390000006264 #18	ENSGT00950000183168.B.a #19	ENSGT00390000003312 #20	ENSGT00940000157582 #21	ENSGT00940000155543 #22	ENSGT00940000156139 #24	ENSGT00940000162094 #23	ENSGT00390000002144 #25	ENSGT00410000025596.a.b #26	ENSGT00940000156761 #27	ENSGT00940000157833 #29	ENSGT00530000063698.b	ENSGT00390000000885.b	ENSGT00940000156213 #30	ENSGT00940000156592 #31	ENSGT00960000190201	ENSGT00940000157151 #32	ENSGT00940000159638 #33	ENSGT00940000153446.a.b	ENSGT00940000160209 #34
Polar bear	MODERN SPECIES	189	FAM76A (ENSUMAG00000011259) #8	STX12 (ENSUMAG00000011252) #9	PPP1R8 (ENSUMAG00000011243) #10	ENSUMAG00000011237 #11	THEMIS2 (ENSUMAG00000011236) #11	RPA2 (ENSUMAG00000011210) #12	SMPDL3B (ENSUMAG00000011203) #13	ENSUMAG00000011201 #14	EYA3 (ENSUMAG00000011197) #15	PTAFR (ENSUMAG00000011170) #16	DNAJC8 (ENSUMAG00000011154) #17	ATP5IF1 (ENSUMAG00000011151) #18	SESN2 (ENSUMAG00000011123) #19	MED18 (ENSUMAG00000011115) #20	PHACTR4 (ENSUMAG00000011103) #21	RCC1 (ENSUMAG00000011078) #22	TRNAU1AP (ENSUMAG00000011068) #24	RAB42 (ENSUMAG00000011052) #23	TAF12 (ENSUMAG00000011046) #25	GMEB1 (ENSUMAG00000011042) #26	YTHDF2 (ENSUMAG00000011040) #27	EPB41 (ENSUMAG00000010982) #29	ENSUMAG00000010964	ENSUMAG00000010957	MECR (ENSUMAG00000010949) #31	PTPRU (ENSUMAG00000009390) #32	MATN1 (ENSUMAG00000009240) #33	LAPTM5 (ENSUMAG00000009235)	PUM1 (ENSUMAG00000009211) #35	NKAIN1 (ENSUMAG00000009198) #36	SNRNP40 (ENSUMAG00000009191)
American black bear	MODERN SPECIES	1747															PHACTR4 (ENSUAMG00000008795) #21	RCC1 (ENSUAMG00000008791) #22	TRNAU1AP (ENSUAMG00000008789) #24	RAB42 (ENSUAMG00000008781) #23	TAF12 (ENSUAMG00000008778) #25	GMEB1 (ENSUAMG00000008775) #26	YTHDF2 (ENSUAMG00000008774) #27
Giant Panda	MODERN SPECIES	11	FGR (ENSAMEG00000010994) #7	ENSAMEG00000011039	FAM76A (ENSAMEG00000011050) #8	STX12 (ENSAMEG00000011073) #9	PPP1R8 (ENSAMEG00000029383) #10	THEMIS2 (ENSAMEG00000011126) #11	RPA2 (ENSAMEG00000011132) #12	SMPDL3B (ENSAMEG00000011140) #13	EYA3 (ENSAMEG00000011164) #15	ENSAMEG00000020209 #16	DNAJC8 (ENSAMEG00000011231) #17	ATP5IF1 (ENSAMEG00000025701) #18	SESN2 (ENSAMEG00000011266) #19	MED18 (ENSAMEG00000011315) #20	PHACTR4 (ENSAMEG00000011317) #21	RCC1 (ENSAMEG00000011337) #22	TRNAU1AP (ENSAMEG00000011367) #24	RAB42 (ENSAMEG00000011382) #23	TAF12 (ENSAMEG00000011386) #25	GMEB1 (ENSAMEG00000011405) #26	YTHDF2 (ENSAMEG00000011429) #27	OPRD1 (ENSAMEG00000011437) #28	EPB41 (ENSAMEG00000011446) #29	TMEM200B (ENSAMEG00000030570)	ENSAMEG00000020210	SRSF4 (ENSAMEG00000025913) #30	MECR (ENSAMEG00000000564) #31	PTPRU (ENSAMEG00000000455) #32	LAPTM5 (ENSAMEG00000017647)	SDC3 (ENSAMEG00000024696) #34	PUM1 (ENSAMEG00000017656) #35
Canidae	ANCESTRAL SPECIES	14	ENSGT01000000214440.A.a.b.a #9	ENSGT00940000156115 #10	ENSGT00530000063770.c.a #11	ENSGT00390000010045 #12	ENSGT00950000183182.a.a #13	ENSGT01090000260093.b #14	ENSGT00950000182978.B #15	ENSGT01060000248589.D #16	ENSGT00390000012569.a.b #17	ENSGT00390000006264.f #18	ENSGT00390000012569.a.a #17	ENSGT00390000006264.e #18	ENSGT00950000183168.B.a #19	ENSGT00390000003312 #20	ENSGT00940000157582 #21	ENSGT00940000155543 #22	ENSGT00940000156139 #24	ENSGT00940000162094 #23	ENSGT00390000002144.c #25	ENSGT00410000025596.a.b #26	ENSGT01100000263839	ENSGT00940000156761 #27	ENSGT00940000157669 #28	ENSGT00940000157833 #29	ENSGT00530000063698.b	ENSGT00940000156213 #30	ENSGT00950000185227	ENSGT00940000156592 #31	ENSGT00940000157151 #32	ENSGT00390000013067.a.a	ENSGT00940000159638 #33
Canis_lupus	ANCESTRAL SPECIES	6	ENSGT01000000214440.A.a.b.a #9	ENSGT00940000156115 #10	ENSGT00530000063770.c.a #11	ENSGT00390000010045 #12	ENSGT00950000183182.a.a #13	ENSGT01090000260093.b #14	ENSGT00950000182978.B #15	ENSGT01060000248589.D #16	ENSGT00390000012569.a.b #17	ENSGT00390000006264.f #18	ENSGT00390000012569.a.a #17	ENSGT00390000006264.e #18	ENSGT00950000183168.B.a #19	ENSGT00390000003312 #20	ENSGT00940000157582 #21	ENSGT00940000155543 #22	ENSGT00940000156139 #24	ENSGT00940000162094 #23	ENSGT00390000002144.c #25	ENSGT00410000025596.a.b #26	ENSGT01100000263839	ENSGT00940000156761 #27	ENSGT00940000157669 #28	ENSGT00940000157833 #29	ENSGT00530000063698.b	ENSGT00940000156213 #30	ENSGT00950000185227	ENSGT00940000156592 #31	ENSGT00940000157151 #32	ENSGT00390000013067.a.a	ENSGT00940000159638 #33
Dingo	MODERN SPECIES	41	FAM76A (ENSCAFG00020023311) #8	STX12 (ENSCAFG00020023387) #9	PPP1R8 (ENSCAFG00020023390) #10	THEMIS2 (ENSCAFG00020023394) #11	RPA2 (ENSCAFG00020023397) #12	ENSCAFG00020023408 #13	XKR8 (ENSCAFG00020023415) #14	EYA3 (ENSCAFG00020023433) #15	PTAFR (ENSCAFG00020023486) #16	DNAJC8 (ENSCAFG00020023488) #17	ENSCAFG00020023497 #18	SESN2 (ENSCAFG00020023502) #19	MED18 (ENSCAFG00020023510) #20	ENSCAFG00020023515	PHACTR4 (ENSCAFG00020023520) #21	RCC1 (ENSCAFG00020023550) #22	TRNAU1AP (ENSCAFG00020023584) #24	RAB42 (ENSCAFG00020023600) #23	ENSCAFG00020023602 #25	GMEB1 (ENSCAFG00020023614) #26	ENSCAFG00020023622	YTHDF2 (ENSCAFG00020023623) #27	OPRD1 (ENSCAFG00020023627) #28	EPB41 (ENSCAFG00020023692) #29	TMEM200B (ENSCAFG00020023960)	SRSF4 (ENSCAFG00020023963) #30	ENSCAFG00020023966	MECR (ENSCAFG00020023972) #31	PTPRU (ENSCAFG00020024014) #32	ENSCAFG00020024568	MATN1 (ENSCAFG00020024574) #33
Dog	MODERN SPECIES	11	ENSCAFG00845010242	FAM76A (ENSCAFG00845011543) #8	STX12 (ENSCAFG00845011509) #9	PPP1R8 (ENSCAFG00845011474) #10	RPA2 (ENSCAFG00845011391) #12	THEMIS2 (ENSCAFG00845011158) #11	SMPDL3B (ENSCAFG00845011070) #13	XKR8 (ENSCAFG00845011047) #14	EYA3 (ENSCAFG00845010903) #15	PTAFR (ENSCAFG00845010815) #16	DNAJC8 (ENSCAFG00845010729) #17	ATP5IF1 (ENSCAFG00845010681) #18	SESN2 (ENSCAFG00845010570) #19	MED18 (ENSCAFG00845010525) #20	PHACTR4 (ENSCAFG00845010267) #21	RCC1 (ENSCAFG00845010088) #22	TRNAU1AP (ENSCAFG00845009934) #24	RAB42 (ENSCAFG00845009808) #23	TAF12 (ENSCAFG00845009757) #25	GMEB1 (ENSCAFG00845009630) #26	YTHDF2 (ENSCAFG00845009574) #27	OPRD1 (ENSCAFG00845009543) #28	EPB41 (ENSCAFG00845008658) #29	TMEM200B (ENSCAFG00845008383)	SRSF4 (ENSCAFG00845008307) #30	ENSCAFG00845008272	MECR (ENSCAFG00845008187) #31	PTPRU (ENSCAFG00845007699) #32	MATN1 (ENSCAFG00845007456) #33	LAPTM5 (ENSCAFG00845007384)	SDC3 (ENSCAFG00845007282) #34
Red fox	MODERN SPECIES	103	IFI6 (ENSVVUG00000012198)	FAM76A (ENSVVUG00000012204) #8	STX12 (ENSVVUG00000012213) #9	PPP1R8 (ENSVVUG00000012220) #10	THEMIS2 (ENSVVUG00000012229) #11	RPA2 (ENSVVUG00000012237) #12	SMPDL3B (ENSVVUG00000012240) #13	XKR8 (ENSVVUG00000012245) #14	EYA3 (ENSVVUG00000012251) #15	PTAFR (ENSVVUG00000012345) #16	ENSVVUG00000012347 #17	ATP5IF1 (ENSVVUG00000012384) #18	SESN2 (ENSVVUG00000012387) #19	MED18 (ENSVVUG00000012393) #20	PHACTR4 (ENSVVUG00000012412) #21	RCC1 (ENSVVUG00000012483) #22	TRNAU1AP (ENSVVUG00000012518) #24	RAB42 (ENSVVUG00000012572) #23	TAF12 (ENSVVUG00000012580) #25	GMEB1 (ENSVVUG00000012632) #26	YTHDF2 (ENSVVUG00000012648) #27	OPRD1 (ENSVVUG00000012659) #28	EPB41 (ENSVVUG00000012664) #29	TMEM200B (ENSVVUG00000012687)	SRSF4 (ENSVVUG00000012690) #30	ENSVVUG00000012696	MECR (ENSVVUG00000012707) #31	PTPRU (ENSVVUG00000012797) #32	ENSVVUG00000014580	MATN1 (ENSVVUG00000014610) #33	LAPTM5 (ENSVVUG00000014616)
Felidae	ANCESTRAL SPECIES	18	ENSGT00390000005534.b.b.c.a	ENSGT00940000160073 #8	ENSGT01000000214440.A.a.b.a #9	ENSGT00940000156115 #10	ENSGT00530000063770.c.a #11	ENSGT00390000010045 #12	ENSGT00950000183182.a.a #13	ENSGT01090000260093.b #14	ENSGT00950000182978.B #15	ENSGT01060000248589.D #16	ENSGT00390000012569.a #17	ENSGT00390000006264 #18	ENSGT00950000183168.B.a #19	ENSGT00390000003312 #20	ENSGT00940000157582 #21	ENSGT00940000155543 #22	ENSGT00940000156139 #24	ENSGT00940000162094 #23	ENSGT00390000002144 #25	ENSGT00410000025596.a.b #26	ENSGT00940000156761 #27	ENSGT00940000157669 #28	ENSGT00940000157833 #29	ENSGT00530000063698.b	ENSGT00940000156213 #30	ENSGT00940000156592 #31	ENSGT00940000157151 #32	ENSGT00940000159638 #33	ENSGT00940000153446.a.b	ENSGT00940000160209 #34	ENSGT00940000158079 #35
Panthera	ANCESTRAL SPECIES	4	ENSGT00390000005534.b.b.c.a	ENSGT00940000160073 #8	ENSGT01000000214440.A.a.b.a #9	ENSGT00940000156115 #10	ENSGT00530000063770.c.a #11	ENSGT00390000010045 #12	ENSGT00950000183182.a.a #13	ENSGT01090000260093.b #14	ENSGT00950000182978.B #15	ENSGT01060000248589.D #16	ENSGT00390000012569.a #17	ENSGT00390000006264 #18	ENSGT00950000183168.B.a #19	ENSGT00390000003312 #20	ENSGT00940000157582 #21	ENSGT00940000155543 #22	ENSGT00940000156139 #24	ENSGT00940000162094 #23	ENSGT00390000002144 #25	ENSGT00410000025596.a.b #26	ENSGT01030000238400	ENSGT00940000156761 #27	ENSGT00940000157669 #28	ENSGT00940000157833 #29	ENSGT00530000063698.b	ENSGT00940000156213 #30	ENSGT00940000156592 #31	ENSGT00940000157151 #32	ENSGT00940000159638 #33	ENSGT00940000153446.a.b	ENSGT00940000160209 #34
Tiger	MODERN SPECIES	577	ENSPTIG00000010596	FAM76A (ENSPTIG00000005861) #8	STX12 (ENSPTIG00000020624) #9	PPP1R8 (ENSPTIG00000019622) #10	THEMIS2 (ENSPTIG00000018247) #11	RPA2 (ENSPTIG00000016481) #12	SMPDL3B (ENSPTIG00000015373) #13	XKR8 (ENSPTIG00000015148) #14	EYA3 (ENSPTIG00000010453) #15	PTAFR (ENSPTIG00000006174) #16	DNAJC8 (ENSPTIG00000006734) #17	ATP5IF1 (ENSPTIG00000005932) #18	SESN2 (ENSPTIG00000004487) #19	MED18 (ENSPTIG00000001854) #20	PHACTR4 (ENSPTIG00000018753) #21	RCC1 (ENSPTIG00000017477) #22	TRNAU1AP (ENSPTIG00000016677) #24	ENSPTIG00000006048 #23	TAF12 (ENSPTIG00000015722) #25	GMEB1 (ENSPTIG00000014944) #26	ENSPTIG00000014736	YTHDF2 (ENSPTIG00000013201) #27	OPRD1 (ENSPTIG00000012209) #28	EPB41 (ENSPTIG00000021700) #29	ENSPTIG00000021305	MECR (ENSPTIG00000021100) #31	PTPRU (ENSPTIG00000012137) #32
Panthera_a	ANCESTRAL SPECIES	14	ENSGT00390000005534.b.b.c.a	ENSGT00940000160073 #8	ENSGT01000000214440.A.a.b.a #9	ENSGT00940000156115 #10	ENSGT00530000063770.c.a #11	ENSGT00390000010045 #12	ENSGT00950000183182.a.a #13	ENSGT01090000260093.b #14	ENSGT00950000182978.B #15	ENSGT01060000248589.D #16	ENSGT00390000012569.a #17	ENSGT00390000006264 #18	ENSGT00950000183168.B.a #19	ENSGT00390000003312 #20	ENSGT00940000157582 #21	ENSGT00940000155543 #22	ENSGT00940000156139 #24	ENSGT00940000162094 #23	ENSGT00390000002144 #25	ENSGT00410000025596.a.b #26	ENSGT01030000238400	ENSGT00940000156761 #27	ENSGT00940000157669 #28	ENSGT00940000157833 #29	ENSGT00530000063698.b	ENSGT00940000156213 #30	ENSGT00940000156592 #31	ENSGT00940000157151 #32	ENSGT00940000159638 #33	ENSGT00940000153446.a.b	ENSGT00940000160209 #34
leopard	MODERN SPECIES	145	FAM76A (ENSPPRG00000008178) #8	STX12 (ENSPPRG00000009522) #9	PPP1R8 (ENSPPRG00000010064) #10	THEMIS2 (ENSPPRG00000010577) #11	RPA2 (ENSPPRG00000011127) #12	SMPDL3B (ENSPPRG00000012800) #13	XKR8 (ENSPPRG00000012969) #14	EYA3 (ENSPPRG00000023907) #15	PTAFR (ENSPPRG00000022317) #16	DNAJC8 (ENSPPRG00000023348) #17	ATP5IF1 (ENSPPRG00000023262) #18	ENSPPRG00000023026	SESN2 (ENSPPRG00000000089) #19	MED18 (ENSPPRG00000000452) #20	PHACTR4 (ENSPPRG00000001381) #21	RCC1 (ENSPPRG00000004306) #22	TRNAU1AP (ENSPPRG00000004416) #24	RAB42 (ENSPPRG00000004516) #23	TAF12 (ENSPPRG00000004656) #25	GMEB1 (ENSPPRG00000004727) #26	ENSPPRG00000005046	YTHDF2 (ENSPPRG00000005205) #27	OPRD1 (ENSPPRG00000005386) #28	EPB41 (ENSPPRG00000014207) #29	TMEM200B (ENSPPRG00000014423)	SRSF4 (ENSPPRG00000016248) #30	MECR (ENSPPRG00000019583) #31	PTPRU (ENSPPRG00000022865) #32
lion	MODERN SPECIES	8	ENSPLOG00000008704	FAM76A (ENSPLOG00000008609) #8	STX12 (ENSPLOG00000008547) #9	PPP1R8 (ENSPLOG00000008473) #10	THEMIS2 (ENSPLOG00000008402) #11	RPA2 (ENSPLOG00000008334) #12	SMPDL3B (ENSPLOG00000008186) #13	XKR8 (ENSPLOG00000008129) #14	EYA3 (ENSPLOG00000008003) #15	PTAFR (ENSPLOG00000007953) #16	DNAJC8 (ENSPLOG00000007924) #17	ATP5IF1 (ENSPLOG00000007893) #18	SESN2 (ENSPLOG00000007834) #19	MED18 (ENSPLOG00000007806) #20	PHACTR4 (ENSPLOG00000007695) #21	RCC1 (ENSPLOG00000013070) #22	TRNAU1AP (ENSPLOG00000012936) #24	RAB42 (ENSPLOG00000012882) #23	TAF12 (ENSPLOG00000012834) #25	GMEB1 (ENSPLOG00000012687) #26	YTHDF2 (ENSPLOG00000012653) #27	OPRD1 (ENSPLOG00000012612) #28	EPB41 (ENSPLOG00000010573) #29	TMEM200B (ENSPLOG00000010145)	SRSF4 (ENSPLOG00000010130) #30	MECR (ENSPLOG00000010095) #31	PTPRU (ENSPLOG00000009674) #32	MATN1 (ENSPLOG00000009594) #33	LAPTM5 (ENSPLOG00000009567)	SDC3 (ENSPLOG00000009532) #34	PUM1 (ENSPLOG00000009086) #35
Cat	MODERN SPECIES	239	IFI6 (ENSFCAG00000033862)	ENSFCAG00000021929	FAM76A (ENSFCAG00000035488) #8	PPP1R8 (ENSFCAG00000027954) #10	THEMIS2 (ENSFCAG00000003404) #11	RPA2 (ENSFCAG00000039600) #12	XKR8 (ENSFCAG00000034139) #14	EYA3 (ENSFCAG00000003408) #15	PTAFR (ENSFCAG00000012031) #16	DNAJC8 (ENSFCAG00000013393) #17	ATP5IF1 (ENSFCAG00000013395) #18	ENSFCAG00000047435	SESN2 (ENSFCAG00000013396) #19	PHACTR4 (ENSFCAG00000013359) #21	ENSFCAG00000044124	RCC1 (ENSFCAG00000013399) #22	TRNAU1AP (ENSFCAG00000013401) #24	RAB42 (ENSFCAG00000037124) #23	TAF12 (ENSFCAG00000029658) #25	GMEB1 (ENSFCAG00000018209) #26	YTHDF2 (ENSFCAG00000012446) #27	EPB41 (ENSFCAG00000007752) #29	TMEM200B (ENSFCAG00000026969)	SRSF4 (ENSFCAG00000027821) #30	MECR (ENSFCAG00000002202) #31	PTPRU (ENSFCAG00000002203) #32	MATN1 (ENSFCAG00000028893) #33	LAPTM5 (ENSFCAG00000022721)	SDC3 (ENSFCAG00000010378) #34	PUM1 (ENSFCAG00000010374) #35	NKAIN1 (ENSFCAG00000045405) #36
Laurasiatheria_c	ANCESTRAL SPECIES		ENSGT00940000163178	ENSGT00940000160073 #8	ENSGT01000000214440.A.a.b.a #9	ENSGT00940000156115 #10	ENSGT00530000063770.c.a #11	ENSGT00390000010045 #12	ENSGT00950000183182.a.a #13	ENSGT01090000260093.b #14	ENSGT00950000182978.B #15	ENSGT01060000248589.D #16	ENSGT00390000012569.a #17	ENSGT00390000006264 #18	ENSGT00950000183168.B.a #19	ENSGT00390000003312 #20	ENSGT00940000157582 #21	ENSGT00940000155543 #22	ENSGT00940000156139 #24	ENSGT00940000162094 #23	ENSGT00940000164873	ENSGT00390000002144 #25	ENSGT00410000025596.a.b #26	ENSGT00940000156761 #27	ENSGT00940000157669 #28	ENSGT00940000157833 #29	ENSGT00530000063698.b	ENSGT00940000156213 #30	ENSGT00950000185227	ENSGT00940000156592 #31	ENSGT00940000157151 #32	ENSGT00940000159638 #33	ENSGT00940000153446.a.b
Equus	ANCESTRAL SPECIES	2	ENSGT00940000163178	ENSGT00940000160073 #8	ENSGT01000000214440.A.a.b.a #9	ENSGT00940000156115 #10	ENSGT00530000063770.c.a #11	ENSGT00390000010045 #12	ENSGT00950000183182.a.a #13	ENSGT01090000260093.b #14	ENSGT00950000182978.B #15	ENSGT01060000248589.D #16	ENSGT00390000012569.a #17	ENSGT00390000006264 #18	ENSGT00950000183168.B.a #19	ENSGT00390000003312 #20	ENSGT00940000157582 #21	ENSGT00940000155543 #22	ENSGT00940000156139 #24	ENSGT00940000162094 #23	ENSGT00940000164873	ENSGT00390000002144 #25	ENSGT00410000025596.a.b #26	ENSGT00940000156761 #27	ENSGT00940000157669 #28	ENSGT00940000157833 #29	ENSGT00530000063698.b	ENSGT00940000156213 #30	ENSGT00950000185227	ENSGT00940000156592 #31	ENSGT00940000157151 #32	ENSGT00940000159638 #33	ENSGT00940000153446.a.b
Horse	MODERN SPECIES	11	FGR (ENSECAG00000007837) #7	STX12 (ENSECAG00000012718) #9	PPP1R8 (ENSECAG00000009693) #10	RPA2 (ENSECAG00000005616) #12	FAM76A (ENSECAG00000019350) #8	THEMIS2 (ENSECAG00000008596) #11	SMPDL3B (ENSECAG00000000634) #13	XKR8 (ENSECAG00000043252) #14	EYA3 (ENSECAG00000017176) #15	PTAFR (ENSECAG00000049724) #16	ATP5IF1 (ENSECAG00000011826) #18	DNAJC8 (ENSECAG00000012708) #17	SESN2 (ENSECAG00000001989) #19	MED18 (ENSECAG00000057255) #20	PHACTR4 (ENSECAG00000022608) #21	RCC1 (ENSECAG00000017252) #22	TRNAU1AP (ENSECAG00000012980) #24	RAB42 (ENSECAG00000012716) #23	ENSECAG00000031513	TAF12 (ENSECAG00000012688) #25	GMEB1 (ENSECAG00000009764) #26	YTHDF2 (ENSECAG00000023108) #27	OPRD1 (ENSECAG00000022616) #28	TMEM200B (ENSECAG00000040505)	EPB41 (ENSECAG00000022255) #29	SRSF4 (ENSECAG00000021350) #30	ENSECAG00000045698	MECR (ENSECAG00000015370) #31	PTPRU (ENSECAG00000012344) #32	MATN1 (ENSECAG00000008747) #33	LAPTM5 (ENSECAG00000000686)
Donkey	MODERN SPECIES	25	FAM76A (ENSEASG00005009497) #8	IFI6 (ENSEASG00005025976)	STX12 (ENSEASG00005009498) #9	PPP1R8 (ENSEASG00005009499) #10	THEMIS2 (ENSEASG00005009503) #11	ENSEASG00005009504 #12	SMPDL3B (ENSEASG00005009506) #13	ENSEASG00005023883 #14	EYA3 (ENSEASG00005009517) #15	PTAFR (ENSEASG00005036385) #16	DNAJC8 (ENSEASG00005010027) #17	ATP5IF1 (ENSEASG00005034782) #18	SESN2 (ENSEASG00005010029) #19	MED18 (ENSEASG00005025944) #20	PHACTR4 (ENSEASG00005010036) #21	RCC1 (ENSEASG00005010059) #22	TRNAU1AP (ENSEASG00005010062) #24	RAB42 (ENSEASG00005030054) #23	ENSEASG00005034491	TAF12 (ENSEASG00005010142) #25	GMEB1 (ENSEASG00005010149) #26	YTHDF2 (ENSEASG00005010152) #27	OPRD1 (ENSEASG00005010156) #28	EPB41 (ENSEASG00005010160) #29	TMEM200B (ENSEASG00005030825)	SRSF4 (ENSEASG00005010168) #30	ENSEASG00005024193	MECR (ENSEASG00005010173) #31	PTPRU (ENSEASG00005010255) #32	MATN1 (ENSEASG00005010809) #33	LAPTM5 (ENSEASG00005010811)
Chiroptera	ANCESTRAL SPECIES		ENSGT00940000163178	ENSGT00940000160073 #8	ENSGT01000000214440.A.a.b.a #9	ENSGT00940000156115 #10	ENSGT00530000063770.c.a #11	ENSGT00390000010045 #12	ENSGT00950000183182.a.a #13	ENSGT01090000260093.b #14	ENSGT00950000182978.B #15	ENSGT01060000248589.D #16	ENSGT00390000012569.a #17	ENSGT00390000006264 #18	ENSGT00950000183168.B.a #19	ENSGT00390000003312 #20	ENSGT00940000157582 #21	ENSGT00940000155543 #22	ENSGT00940000156139 #24	ENSGT00940000162094 #23	ENSGT00390000002144 #25	ENSGT00410000025596.a.b #26	ENSGT00940000156761 #27	ENSGT00940000157669 #28	ENSGT00940000157833 #29	ENSGT00530000063698.b	ENSGT00940000156213 #30	ENSGT00940000156592 #31	ENSGT00940000157151 #32	ENSGT00940000159638 #33	ENSGT00940000153446.a.b	ENSGT00940000160209 #34	ENSGT00940000158079 #35
Microchiroptera	ANCESTRAL SPECIES	1	ENSGT00940000163178	ENSGT00940000160073 #8	ENSGT01000000214440.A.a.b.a #9	ENSGT00940000156115 #10	ENSGT00530000063770.c.a #11	ENSGT00390000010045 #12	ENSGT00950000183182.a.a #13	ENSGT01090000260093.b #14	ENSGT00950000182978.B #15	ENSGT01060000248589.D #16	ENSGT00390000012569.a #17	ENSGT00390000006264 #18	ENSGT00950000183168.B.a #19	ENSGT00390000003312 #20	ENSGT00940000157582 #21	ENSGT00940000155543 #22	ENSGT00940000156139 #24	ENSGT00940000162094 #23	ENSGT00390000002144 #25	ENSGT00410000025596.a.b #26	ENSGT00940000156761 #27	ENSGT00940000157669 #28	ENSGT00940000157833 #29	ENSGT00530000063698.b	ENSGT00940000156213 #30	ENSGT00940000156592 #31	ENSGT00940000157151 #32	ENSGT00940000159638 #33	ENSGT00940000153446.a.b	ENSGT00940000160209 #34	ENSGT00940000158079 #35
Greater horseshoe bat	MODERN SPECIES	27	STX12 (ENSRFEG00010006392) #9	PPP1R8 (ENSRFEG00010006439) #10	THEMIS2 (ENSRFEG00010006552) #11	RPA2 (ENSRFEG00010006599) #12	SMPDL3B (ENSRFEG00010006653) #13	XKR8 (ENSRFEG00010006721) #14	EYA3 (ENSRFEG00010006785) #15	ENSRFEG00010006954	ENSRFEG00010006978	PTAFR (ENSRFEG00010007010) #16	DNAJC8 (ENSRFEG00010007033) #17	ATP5IF1 (ENSRFEG00010007102) #18	SESN2 (ENSRFEG00010007186) #19	MED18 (ENSRFEG00010007232) #20	PHACTR4 (ENSRFEG00010007281) #21	RCC1 (ENSRFEG00010007341) #22	TRNAU1AP (ENSRFEG00010007390) #24	RAB42 (ENSRFEG00010007467) #23	TAF12 (ENSRFEG00010007502) #25	GMEB1 (ENSRFEG00010007547) #26	YTHDF2 (ENSRFEG00010007674) #27	ENSRFEG00010007704	OPRD1 (ENSRFEG00010007729) #28	EPB41 (ENSRFEG00010007813) #29	ENSRFEG00010008226	TMEM200B (ENSRFEG00010008234)	SRSF4 (ENSRFEG00010008251) #30	MECR (ENSRFEG00010008283) #31	PTPRU (ENSRFEG00010008351) #32	MATN1 (ENSRFEG00010008435) #33	LAPTM5 (ENSRFEG00010008534)
Microbat	MODERN SPECIES	1134	IFI6 (ENSMLUG00000014587)	FAM76A (ENSMLUG00000000136) #8	STX12 (ENSMLUG00000000141) #9	PPP1R8 (ENSMLUG00000000144) #10	THEMIS2 (ENSMLUG00000000147) #11	RPA2 (ENSMLUG00000000151) #12	SMPDL3B (ENSMLUG00000026678) #13	XKR8 (ENSMLUG00000000154) #14	AHDC1 (ENSMLUG00000014574)	EYA3 (ENSMLUG00000000155) #15	PTAFR (ENSMLUG00000000164) #16	DNAJC8 (ENSMLUG00000000165) #17	ENSMLUG00000000170 #18	SESN2 (ENSMLUG00000000171) #19	PHACTR4 (ENSMLUG00000017066) #21	RCC1 (ENSMLUG00000017075) #22	TRNAU1AP (ENSMLUG00000012586) #24	RAB42 (ENSMLUG00000012593) #23	TAF12 (ENSMLUG00000012595) #25	GMEB1 (ENSMLUG00000012602) #26	YTHDF2 (ENSMLUG00000012606) #27	OPRD1 (ENSMLUG00000012582) #28	EPB41 (ENSMLUG00000014752) #29	SRSF4 (ENSMLUG00000014770) #30	MECR (ENSMLUG00000014778) #31	PTPRU (ENSMLUG00000014784) #32
Megabat	MODERN SPECIES	3218															PHACTR4 (ENSPVAG00000017207) #21	RCC1 (ENSPVAG00000017211) #22	TRNAU1AP (ENSPVAG00000017214) #24	RAB42 (ENSPVAG00000017218) #23	TAF12 (ENSPVAG00000017220) #25	GMEB1 (ENSPVAG00000017223) #26	YTHDF2 (ENSPVAG00000017224) #27	OPRD1 (ENSPVAG00000017226) #28
Eulipotyphla	ANCESTRAL SPECIES																	ENSGT00940000155543 #22
Common shrew	MODERN SPECIES	5734																RCC1 (ENSSARG00000010409) #22
Hedgehog	MODERN SPECIES	7307																RCC1 (ENSEEUG00000004565) #22
Atlantogenata	ANCESTRAL SPECIES	4	ENSGT00940000163178	ENSGT00940000160073 #8	ENSGT01000000214440.A.a.b.a #9	ENSGT00940000156115 #10	ENSGT00530000063770.c.a #11	ENSGT00390000010045 #12	ENSGT00950000183182.a.a #13	ENSGT01090000260093.b #14	ENSGT00950000182978.B #15	ENSGT01060000248589.D #16	ENSGT00390000012569.a #17	ENSGT00390000006264 #18	ENSGT00950000183168.B.a #19	ENSGT00390000003312 #20	ENSGT00940000157582 #21	ENSGT00940000155543 #22	ENSGT00940000156139 #24	ENSGT00940000162094 #23	ENSGT00390000002144 #25	ENSGT00410000025596.a.b #26	ENSGT00940000156761 #27	ENSGT00940000157669 #28	ENSGT00940000157833 #29	ENSGT00530000063698.b	ENSGT00940000156213 #30	ENSGT00940000156592 #31	ENSGT00940000157151 #32	ENSGT00940000159638 #33	ENSGT00940000153446.a.b	ENSGT00940000160209 #34	ENSGT00940000158079 #35
Afrotheria	ANCESTRAL SPECIES	15	ENSGT00940000163178	ENSGT00940000160073 #8	ENSGT01000000214440.A.a.b.a #9	ENSGT00940000156115 #10	ENSGT00530000063770.c.a #11	ENSGT00390000010045 #12	ENSGT00950000183182.a.a #13	ENSGT01090000260093.b #14	ENSGT00950000182978.B #15	ENSGT01060000248589.D #16	ENSGT00390000012569.a #17	ENSGT00390000006264 #18	ENSGT00950000183168.B.a #19	ENSGT00390000003312 #20	ENSGT00940000157582 #21	ENSGT00940000155543 #22	ENSGT00940000156139 #24	ENSGT00390000002144 #25	ENSGT00410000025596.a.b #26	ENSGT00940000156761 #27	ENSGT00940000157669 #28	ENSGT00940000157833 #29	ENSGT00530000063698.b	ENSGT00940000156213 #30	ENSGT00940000156592 #31	ENSGT00940000157151 #32	ENSGT00940000159638 #33	ENSGT00940000153446.a.b	ENSGT00940000160209 #34	ENSGT00940000158079 #35	ENSGT00940000159949 #36
Afrotheria_a	ANCESTRAL SPECIES	15	ENSGT00940000163178	ENSGT00940000160073 #8	ENSGT01000000214440.A.a.b.a #9	ENSGT00940000156115 #10	ENSGT00530000063770.c.a #11	ENSGT00390000010045 #12	ENSGT00950000183182.a.a #13	ENSGT01090000260093.b #14	ENSGT00950000182978.B #15	ENSGT01060000248589.D #16	ENSGT00390000012569.a #17	ENSGT00390000006264 #18	ENSGT00950000183168.B.a #19	ENSGT00390000003312 #20	ENSGT00940000157582 #21	ENSGT00940000155543 #22	ENSGT00940000156139 #24	ENSGT00390000002144 #25	ENSGT00410000025596.a.b #26	ENSGT00940000156761 #27	ENSGT00940000157669 #28	ENSGT00940000157833 #29	ENSGT00530000063698.b	ENSGT00940000156213 #30	ENSGT00940000156592 #31	ENSGT00940000157151 #32	ENSGT00940000159638 #33	ENSGT00940000153446.a.b	ENSGT00940000160209 #34	ENSGT00940000158079 #35	ENSGT00940000159949 #36
Elephant	MODERN SPECIES	332	ENSLAFG00000023210	FAM76A (ENSLAFG00000017824) #8	STX12 (ENSLAFG00000017828) #9	PPP1R8 (ENSLAFG00000017834) #10	THEMIS2 (ENSLAFG00000009492) #11	RPA2 (ENSLAFG00000014387) #12	SMPDL3B (ENSLAFG00000008605) #13	XKR8 (ENSLAFG00000008610) #14	EYA3 (ENSLAFG00000008613) #15	PTAFR (ENSLAFG00000007791) #16	DNAJC8 (ENSLAFG00000005695) #17	ATP5IF1 (ENSLAFG00000005700) #18	SESN2 (ENSLAFG00000013698) #19	MED18 (ENSLAFG00000012511) #20	PHACTR4 (ENSLAFG00000007617) #21	RCC1 (ENSLAFG00000007626) #22	TRNAU1AP (ENSLAFG00000007628) #24	TAF12 (ENSLAFG00000014103) #25	GMEB1 (ENSLAFG00000011849) #26	YTHDF2 (ENSLAFG00000030451) #27	OPRD1 (ENSLAFG00000017219) #28	EPB41 (ENSLAFG00000002571) #29	TMEM200B (ENSLAFG00000031258)	SRSF4 (ENSLAFG00000002575) #30	MECR (ENSLAFG00000002576) #31	PTPRU (ENSLAFG00000010090) #32	ENSLAFG00000032386	MATN1 (ENSLAFG00000012878) #33	LAPTM5 (ENSLAFG00000029640)	SDC3 (ENSLAFG00000013200) #34	PUM1 (ENSLAFG00000003178) #35
Hyrax	MODERN SPECIES	7096															ENSPCAG00000014383 #21	RCC1 (ENSPCAG00000014443) #22
Tenrec	MODERN SPECIES	7164																RCC1 (ENSETEG00000011999) #22
Xenarthra	ANCESTRAL SPECIES	38	ENSGT00940000157554 #7	ENSGT00940000160073 #8	ENSGT01000000214440.A.a.b.a #9	ENSGT00940000156115 #10	ENSGT00530000063770.c.a #11	ENSGT00390000010045 #12	ENSGT00950000183182.a.a #13	ENSGT01090000260093.b #14	ENSGT00950000182978.B #15	ENSGT01060000248589.D #16	ENSGT00390000012569.a #17	ENSGT00390000006264 #18	ENSGT00950000183168.B.a #19	ENSGT00390000003312 #20	ENSGT00940000157582 #21	ENSGT00940000155543 #22	ENSGT00940000156139 #24	ENSGT00940000162094 #23	ENSGT00390000002144 #25	ENSGT00410000025596.a.b #26	ENSGT00940000156761 #27	ENSGT00940000157669 #28	ENSGT00940000157833 #29	ENSGT00530000063698.b	ENSGT00940000156213 #30	ENSGT00940000156592 #31
Sloth	MODERN SPECIES	6469																RCC1 (ENSCHOG00000004654) #22
Armadillo	MODERN SPECIES	1291	STX12 (ENSDNOG00000049359) #9	PPP1R8 (ENSDNOG00000033057) #10	THEMIS2 (ENSDNOG00000013968) #11	RPA2 (ENSDNOG00000023660) #12	SMPDL3B (ENSDNOG00000032579) #13	XKR8 (ENSDNOG00000032960) #14	EYA3 (ENSDNOG00000044648) #15	PTAFR (ENSDNOG00000044017) #16	ENSDNOG00000042785 #17	ENSDNOG00000045464 #18	ENSDNOG00000038753	SESN2 (ENSDNOG00000017933) #19	MED18 (ENSDNOG00000012531) #20	ENSDNOG00000035347	PHACTR4 (ENSDNOG00000003784) #21	RCC1 (ENSDNOG00000042718) #22	ENSDNOG00000033009 #24	RAB42 (ENSDNOG00000010079) #23	TAF12 (ENSDNOG00000045864) #25	GMEB1 (ENSDNOG00000025258) #26	YTHDF2 (ENSDNOG00000033903) #27	OPRD1 (ENSDNOG00000046525) #28	EPB41 (ENSDNOG00000019472) #29	TMEM200B (ENSDNOG00000035804)	SRSF4 (ENSDNOG00000047961) #30	MECR (ENSDNOG00000048252) #31
Marsupialia	ANCESTRAL SPECIES	10	ENSGT00940000157554 #7	ENSGT00940000160073 #8	ENSGT01000000214440.A.a.b.a #9	ENSGT00940000156115 #10	ENSGT00530000063770.c.a #11	ENSGT00390000010045 #12	ENSGT00950000183182.a.a #13	ENSGT01090000260093.b #14	ENSGT00950000182978.B #15	ENSGT01060000248589.D #16	ENSGT00390000012569.a #17	ENSGT00390000006264 #18	ENSGT00950000183168.B.a #19	ENSGT00390000003312 #20	ENSGT00940000157582 #21	ENSGT00940000155543 #22	ENSGT00940000156139 #24	ENSGT00940000162094 #23	ENSGT00940000164873	ENSGT00390000002144 #25	ENSGT00410000025596.a.b #26	ENSGT00940000156761 #27	ENSGT00940000157669 #28	ENSGT00940000157833 #29	ENSGT00530000063698.b	ENSGT00940000156213 #30	ENSGT00940000156592 #31	ENSGT00940000157151 #32	ENSGT00940000159638 #33	ENSGT00940000153446.a.b	ENSGT00940000160209 #34
Opossum	MODERN SPECIES	3	FAM76A (ENSMODG00000010679) #8	PPP1R8 (ENSMODG00000010718) #10	ENSMODG00000046728 #11	RPA2 (ENSMODG00000010736) #12	ENSMODG00000010740 #13	ENSMODG00000049155 #13	ENSMODG00000042812 #13	XKR8 (ENSMODG00000010757) #14	EYA3 (ENSMODG00000010782) #15	PTAFR (ENSMODG00000023875) #16	DNAJC8 (ENSMODG00000050324) #17	ENSMODG00000010826 #18	SESN2 (ENSMODG00000010846) #19	MED18 (ENSMODG00000037195) #20	PHACTR4 (ENSMODG00000010884) #21	RCC1 (ENSMODG00000010901) #22	TRNAU1AP (ENSMODG00000010927) #24	RAB42 (ENSMODG00000023873) #23	ENSMODG00000010938	TAF12 (ENSMODG00000040227) #25	GMEB1 (ENSMODG00000010947) #26	YTHDF2 (ENSMODG00000023872) #27	OPRD1 (ENSMODG00000011019) #28	EPB41 (ENSMODG00000011038) #29	ENSMODG00000028993	TMEM200B (ENSMODG00000011044)	SRSF4 (ENSMODG00000011052) #30	MECR (ENSMODG00000011066) #31	ENSMODG00000011076 #32	ENSMODG00000023869	ENSMODG00000049794
Marsupialia_b	ANCESTRAL SPECIES	4	ENSGT00940000157554 #7	ENSGT00940000160073 #8	ENSGT01000000214440.A.a.b.a #9	ENSGT00940000156115 #10	ENSGT00530000063770.c.a #11	ENSGT00390000010045 #12	ENSGT00950000183182.a.a #13	ENSGT01090000260093.b #14	ENSGT00950000182978.B #15	ENSGT01060000248589.D #16	ENSGT00390000012569.a #17	ENSGT00390000006264 #18	ENSGT00950000183168.B.a #19	ENSGT00390000003312 #20	ENSGT00940000157582 #21	ENSGT00940000155543 #22	ENSGT00940000156139 #24	ENSGT00940000162094 #23	ENSGT00940000164873	ENSGT00390000002144 #25	ENSGT00410000025596.a.b #26	ENSGT00940000156761 #27	ENSGT00940000157669 #28	ENSGT00940000157833 #29	ENSGT00530000063698.b	ENSGT00940000156213 #30	ENSGT00940000156592 #31	ENSGT00940000157151 #32	ENSGT00940000159638 #33	ENSGT00940000153446.a.b	ENSGT00940000160209 #34
Diprotodontia	ANCESTRAL SPECIES	3	ENSGT00940000157554 #7	ENSGT00940000160073 #8	ENSGT01000000214440.A.a.b.a #9	ENSGT00940000156115 #10	ENSGT00530000063770.c.a #11	ENSGT00390000010045 #12	ENSGT00950000183182.a.a #13	ENSGT01090000260093.b #14	ENSGT00950000182978.B #15	ENSGT01060000248589.D #16	ENSGT00390000012569.a #17	ENSGT00390000006264 #18	ENSGT00950000183168.B.a #19	ENSGT00390000003312 #20	ENSGT00940000157582 #21	ENSGT00940000155543 #22	ENSGT00940000156139 #24	ENSGT00940000162094 #23	ENSGT00940000164873	ENSGT00390000002144 #25	ENSGT00410000025596.a.b #26	ENSGT00940000156761 #27	ENSGT00940000157669 #28	ENSGT00940000157833 #29	ENSGT00530000063698.b	ENSGT00940000156213 #30	ENSGT00940000156592 #31	ENSGT00940000157151 #32	ENSGT00940000159638 #33	ENSGT00940000153446.a.b	ENSGT00940000160209 #34
Diprotodontia_a	ANCESTRAL SPECIES	4	ENSGT00940000160073 #8	ENSGT01000000214440.A.a.b.a #9	ENSGT00940000156115 #10	ENSGT00530000063770.c.a #11	ENSGT00390000010045 #12	ENSGT00950000183182.a.a #13	ENSGT01090000260093.b #14	ENSGT00950000182978.B #15	ENSGT01060000248589.D #16	ENSGT00390000012569.a #17	ENSGT00390000006264 #18	ENSGT00950000183168.B.a #19	ENSGT00390000003312 #20	ENSGT00940000158516.d	ENSGT00940000157582 #21	ENSGT00940000155543 #22	ENSGT00940000156139 #24	ENSGT00940000162094 #23	ENSGT00940000164873	ENSGT00390000002144 #25	ENSGT00410000025596.a.b #26	ENSGT00940000156761 #27	ENSGT00940000157669 #28	ENSGT00940000157833 #29	ENSGT00530000063698.b	ENSGT00940000156213 #30	ENSGT00940000156592 #31	ENSGT00940000157151 #32	ENSGT00940000159638 #33	ENSGT00940000153446.a.b	ENSGT00940000160209 #34
Common wonbat	MODERN SPECIES	1014	ENSVURG00010018943 #7	ENSVURG00010018952 #8	ENSVURG00010018959 #9	ENSVURG00010018962 #10	ENSVURG00010018967 #11	ENSVURG00010018972 #12	ENSVURG00010018977 #13	ENSVURG00010018981 #14	ENSVURG00010018986 #15	DNAJC8 (ENSVURG00010018998) #17	ATP5IF1 (ENSVURG00010019004) #18	SESN2 (ENSVURG00010019007) #19	MED18 (ENSVURG00010019012) #20	ENSVURG00010019014	PHACTR4 (ENSVURG00010019021) #21	RCC1 (ENSVURG00010019034) #22	TRNAU1AP (ENSVURG00010019042) #24	RAB42 (ENSVURG00010019057) #23	ENSVURG00010019060	TAF12 (ENSVURG00010019065) #25	GMEB1 (ENSVURG00010019073) #26	YTHDF2 (ENSVURG00010019090) #27	OPRD1 (ENSVURG00010019102) #28	EPB41 (ENSVURG00010019138) #29	TMEM200B (ENSVURG00010019172)	SRSF4 (ENSVURG00010019175) #30	MECR (ENSVURG00010019183) #31	PTPRU (ENSVURG00010019212) #32	ENSVURG00010019248	MATN1 (ENSVURG00010019256) #33	LAPTM5 (ENSVURG00010019267)
koala	MODERN SPECIES	14	FAM76A (ENSPCIG00000022294) #8	STX12 (ENSPCIG00000022297) #9	PPP1R8 (ENSPCIG00000036471) #10	THEMIS2 (ENSPCIG00000022310) #11	RPA2 (ENSPCIG00000022320) #12	SMPDL3B (ENSPCIG00000022329) #13	XKR8 (ENSPCIG00000022335) #14	EYA3 (ENSPCIG00000022339) #15	PTAFR (ENSPCIG00000022363) #16	DNAJC8 (ENSPCIG00000022366) #17	ATP5IF1 (ENSPCIG00000022375) #18	SESN2 (ENSPCIG00000022378) #19	MED18 (ENSPCIG00000022383) #20	ENSPCIG00000022385	PHACTR4 (ENSPCIG00000027472) #21	RCC1 (ENSPCIG00000010439) #22	TRNAU1AP (ENSPCIG00000022389) #24	ENSPCIG00000022398 #23	ENSPCIG00000022399	TAF12 (ENSPCIG00000022402) #25	GMEB1 (ENSPCIG00000022406) #26	YTHDF2 (ENSPCIG00000022413) #27	OPRD1 (ENSPCIG00000022418) #28	EPB41 (ENSPCIG00000022421) #29	TMEM200B (ENSPCIG00000022428)	ENSPCIG00000022430	MECR (ENSPCIG00000022434) #31	PTPRU (ENSPCIG00000022440) #32	ENSPCIG00000022449	MATN1 (ENSPCIG00000017737) #33	LAPTM5 (ENSPCIG00000014169)
Wallaby	MODERN SPECIES	8697																RCC1 (ENSMEUG00000008826) #22
Tasmanian devil	MODERN SPECIES	2	FGR (ENSSHAG00000001546) #7	FAM76A (ENSSHAG00000022341) #8	PPP1R8 (ENSSHAG00000024313) #10	THEMIS2 (ENSSHAG00000015133) #11	RPA2 (ENSSHAG00000015255) #12	SMPDL3B (ENSSHAG00000015331) #13	XKR8 (ENSSHAG00000026927) #14	EYA3 (ENSSHAG00000027000) #15	ENSSHAG00000029212	PTAFR (ENSSHAG00000026787) #16	DNAJC8 (ENSSHAG00000003717) #17	ENSSHAG00000022171 #18	SESN2 (ENSSHAG00000004785) #19	MED18 (ENSSHAG00000031976) #20	PHACTR4 (ENSSHAG00000006497) #21	RCC1 (ENSSHAG00000027903) #22	TRNAU1AP (ENSSHAG00000008108) #24	ENSSHAG00000008443 #23	ENSSHAG00000030345	TAF12 (ENSSHAG00000008563) #25	GMEB1 (ENSSHAG00000009099) #26	YTHDF2 (ENSSHAG00000009502) #27	OPRD1 (ENSSHAG00000024576) #28	EPB41 (ENSSHAG00000011604) #29	TMEM200B (ENSSHAG00000025196)	SRSF4 (ENSSHAG00000024879) #30	PTPRU (ENSSHAG00000017352) #32	ENSSHAG00000031333	LAPTM5 (ENSSHAG00000013255)	SDC3 (ENSSHAG00000028518) #34	PUM1 (ENSSHAG00000010918) #35
Platypus	MODERN SPECIES	7	FGR (ENSOANG00000010074) #7	ENSOANG00000040112	ENSOANG00000045139	FAM76A (ENSOANG00000039444) #8	STX12 (ENSOANG00000008316) #9	PPP1R8 (ENSOANG00000008315) #10	ENSOANG00000037115	ENSOANG00000000149	ENSOANG00000038747	ENSOANG00000000475	DNAJC8 (ENSOANG00000048514) #17	ENSOANG00000049622 #18	SESN2 (ENSOANG00000000634) #19	MED18 (ENSOANG00000036333) #20	PHACTR4 (ENSOANG00000001179) #21	RCC1 (ENSOANG00000001180) #22	TRNAU1AP (ENSOANG00000038042) #24	TAF12 (ENSOANG00000050475) #25	GMEB1 (ENSOANG00000006127) #26	YTHDF2 (ENSOANG00000006124) #27	ENSOANG00000037089	ENSOANG00000014967	ENSOANG00000039060	ENSOANG00000047775	ZNF436 (ENSOANG00000043950)	ENSOANG00000003962	HNRNPR (ENSOANG00000003961)	ENSOANG00000008954	LUZP1 (ENSOANG00000040319)	KDM1A (ENSOANG00000004000)	ENSOANG00000028498
Sauria	ANCESTRAL SPECIES	23	ENSGT00940000154868.a.b	ENSGT00940000160932	ENSGT00940000159398	ENSGT00940000157531	ENSGT00530000063929.a.b	ENSGT01060000248564.b.a.a.a	ENSGT00950000182962.b.a	ENSGT00390000018883	ENSGT00940000157554 #7	ENSGT00940000163923.f	ENSGT00940000163923.e	ENSGT00940000160073 #8	ENSGT00950000183168.B.a #19	ENSGT00390000003312 #20	ENSGT00940000157582 #21	ENSGT00940000155543 #22	ENSGT00940000157669 #28	ENSGT00940000157034	ENSGT00940000161085	ENSGT00940000160992	ENSGT00940000161879	ENSGT00940000160504	ENSGT00940000167209	ENSGT00940000156761 #27	ENSGT01100000263839	ENSGT00410000025596.a.b #26	ENSGT00390000002144 #25	ENSGT00940000164873	ENSGT00940000162094 #23	ENSGT00940000156139.ab #24	ENSGT00940000155019.a.a
Archelosauria	ANCESTRAL SPECIES	25	ENSGT00940000160932	ENSGT00940000159398	ENSGT00940000157531	ENSGT00530000063929.a.b	ENSGT01060000248564.b.a.a.a	ENSGT00950000182962.b.a	ENSGT00390000018883	ENSGT00940000157554 #7	ENSGT00940000163923.f	ENSGT00940000163923.e	ENSGT00940000163282.j	ENSGT00940000161215.hc.b	ENSGT00940000160073 #8	ENSGT00950000183168.B.a #19	ENSGT00940000157582 #21	ENSGT00940000155543 #22	ENSGT00940000157669 #28	ENSGT00940000157034	ENSGT00940000161085	ENSGT00940000160992	ENSGT00940000161879	ENSGT00940000160504	ENSGT00940000167209	ENSGT00940000156761 #27	ENSGT01100000263839	ENSGT00410000025596.a.b #26	ENSGT00390000002144 #25	ENSGT00940000164873	ENSGT00940000162094 #23	ENSGT00940000156139.ab #24	ENSGT00940000155019.a.a
Archosauria	ANCESTRAL SPECIES	22	ENSGT00940000154868.a.b	ENSGT00940000160932	ENSGT00940000159398	ENSGT00530000063929.a.b	ENSGT01060000248564.b.a.a.a	ENSGT00950000182962.b.a	ENSGT00390000018883	ENSGT00940000157554 #7	ENSGT00940000163923.f	ENSGT00940000163923.e	ENSGT00940000163282.j	ENSGT00940000161215.hc.b	ENSGT00940000160073 #8	ENSGT00950000183168.B.a #19	ENSGT00940000157582 #21	ENSGT00940000155543 #22	ENSGT00940000157669 #28	ENSGT00940000157034	ENSGT00940000161085	ENSGT00940000160992	ENSGT00940000160504	ENSGT00940000167209	ENSGT00940000156761 #27	ENSGT01100000263839	ENSGT00410000025596.a.b #26	ENSGT00390000002144 #25	ENSGT00940000164873	ENSGT00940000162094 #23	ENSGT00940000156139.ab #24	ENSGT00940000155019.a.a	ENSGT00960000189438
Aves	ANCESTRAL SPECIES	28	ENSGT00940000156338	ENSGT00950000182900.B	ENSGT00390000007371	ENSGT00940000160932	ENSGT00940000159398	ENSGT00530000063929.a.b	ENSGT01060000248564.b.a.a.a	ENSGT00950000182962.b.a	ENSGT00390000018883	ENSGT00940000157554 #7	ENSGT00940000163923.f	ENSGT00940000163923.e	ENSGT00940000160073 #8	ENSGT00950000183168.B.a #19	ENSGT00940000157582 #21	ENSGT00940000155543 #22	ENSGT00940000157669 #28	ENSGT00940000157034	ENSGT00940000161085	ENSGT00940000160992	ENSGT00940000160504	ENSGT00940000167209	ENSGT00940000156761 #27	ENSGT01100000263839	ENSGT00410000025596.a.b #26	ENSGT00390000002144 #25	ENSGT00940000164873	ENSGT00940000162094 #23	ENSGT00940000156139.ab #24	ENSGT00940000155019.a.a	ENSGT00960000189438
Neognathae	ANCESTRAL SPECIES	26	ENSGT00940000156338	ENSGT00950000182900.B	ENSGT00390000007371	ENSGT00940000160932	ENSGT00940000159398	ENSGT00530000063929.a.b	ENSGT01060000248564.b.a.a.a	ENSGT00950000182962.b.a	ENSGT00390000018883	ENSGT00940000157554 #7	ENSGT00940000163923.f	ENSGT00940000163923.e	ENSGT00940000160073 #8	ENSGT00950000183168.B.a #19	ENSGT00940000157582 #21	ENSGT00940000155543 #22	ENSGT00940000157669 #28	ENSGT00940000157034	ENSGT00940000161085	ENSGT00940000160992	ENSGT00940000160504	ENSGT00940000167209	ENSGT00940000156761 #27	ENSGT01100000263839	ENSGT00410000025596.a.b #26	ENSGT00390000002144 #25	ENSGT00940000164873	ENSGT00940000162094 #23	ENSGT00940000156139.ab #24	ENSGT00940000155019.a.a	ENSGT00960000189438
Galloanserae	ANCESTRAL SPECIES	25	ENSGT00950000182900.B	ENSGT00390000007371	ENSGT00940000160932	ENSGT00960000191085	ENSGT00940000159398	ENSGT00530000063929.a.b	ENSGT01060000248564.b.a.a.a	ENSGT00950000182962.b.a	ENSGT00390000018883	ENSGT00940000157554 #7	ENSGT00940000163923.f	ENSGT00940000163923.e	ENSGT00940000160073 #8	ENSGT00950000183168.B.a #19	ENSGT00940000157582 #21	ENSGT00940000155543 #22	ENSGT00940000157669 #28	ENSGT00940000157034	ENSGT00940000161085	ENSGT00940000160992	ENSGT00940000160504	ENSGT00940000167209	ENSGT00940000156761 #27	ENSGT01100000263839	ENSGT00410000025596.a.b #26	ENSGT00390000002144 #25	ENSGT00940000164873	ENSGT00940000162094 #23	ENSGT00940000156139.ab #24	ENSGT00940000155019.a.a	ENSGT00960000189438
Anatidae	ANCESTRAL SPECIES	21	ENSGT00390000016565	ENSGT00960000189819	ENSGT00940000160747	ENSGT00940000156338	ENSGT00950000182900.B	ENSGT00390000007371	ENSGT00940000159398	ENSGT00530000063929.a.b	ENSGT01060000248564.b.a.a.a	ENSGT00950000182962.b.a	ENSGT00390000018883	ENSGT00940000163923.f.b	ENSGT00940000160073 #8	ENSGT00950000183168.B.a #19	ENSGT00940000157582 #21	ENSGT00940000155543 #22	ENSGT00940000157669 #28	ENSGT00940000157034	ENSGT00940000161085	ENSGT00940000160992	ENSGT00940000156761 #27	ENSGT01100000263839	ENSGT00410000025596.a.b #26	ENSGT00390000002144 #25	ENSGT00940000164873	ENSGT00940000162094 #23	ENSGT00940000156139.ab #24	ENSGT00940000155019.a.a	ENSGT00960000189438	ENSGT00940000157833 #29	ENSGT00530000063698.b
Pink-footed goose	MODERN SPECIES	73	SLC9A1 (ENSABRG00000001962)	WDTC1 (ENSABRG00000002008)	TMEM222 (ENSABRG00000002037)	MAP3K6 (ENSABRG00000002099)	CD164L2 (ENSABRG00000002608)	GPR3 (ENSABRG00000002622)	WASF2 (ENSABRG00000002634)	ENSABRG00000002652	AHDC1 (ENSABRG00000002665)	ENSABRG00000002676	ENSABRG00000002709	ENSABRG00000002732	FAM76A (ENSABRG00000002772) #8	SESN2 (ENSABRG00000002796) #19	PHACTR4 (ENSABRG00000002835) #21	RCC1 (ENSABRG00000002909) #22	OPRD1 (ENSABRG00000002932) #28	TCEA3 (ENSABRG00000002935)	ASAP3 (ENSABRG00000003095)	E2F2 (ENSABRG00000005175)
Duck	MODERN SPECIES	15	KDF1 (ENSAPLG00000010691)	ENSAPLG00000019975	ENSAPLG00000025590	TENT5B (ENSAPLG00000001361)	SLC9A1 (ENSAPLG00000016147)	WDTC1 (ENSAPLG00000015930)	TMEM222 (ENSAPLG00000021290)	ENSAPLG00000016993	ENSAPLG00000015805	WASF2 (ENSAPLG00000010236)	ENSAPLG00000022698	FAM76A (ENSAPLG00000004037) #8	SESN2 (ENSAPLG00000010959) #19	ENSAPLG00000022334	PHACTR4 (ENSAPLG00000019553) #21	RCC1 (ENSAPLG00000026840) #22	OPRD1 (ENSAPLG00000002972) #28	TCEA3 (ENSAPLG00000025037)	ENSAPLG00000018663	ENSAPLG00000031239	E2F2 (ENSAPLG00000021411)	YTHDF2 (ENSAPLG00000020468) #27	GMEB1 (ENSAPLG00000002955) #26	ENSAPLG00000016740	TAF12 (ENSAPLG00000002881) #25	ENSAPLG00000002659	RAB42 (ENSAPLG00000017350) #23	TRNAU1AP (ENSAPLG00000002606) #24	ENSAPLG00000002488	EPB41 (ENSAPLG00000016409) #29	TMEM200B (ENSAPLG00000023489)
Phasianidae	ANCESTRAL SPECIES	24	ENSGT00940000160747	ENSGT00940000156338	ENSGT00950000182900.B	ENSGT00390000007371	ENSGT00940000160932	ENSGT00940000159398	ENSGT00960000189365	ENSGT00950000182962.b.a	ENSGT00390000018883	ENSGT00940000157554 #7	ENSGT00940000163923.f	ENSGT00940000163923.e	ENSGT00940000160073 #8	ENSGT00950000183168.B.a #19	ENSGT00940000157582 #21	ENSGT00940000155543 #22	ENSGT00940000157669 #28	ENSGT00940000157034	ENSGT00940000161085	ENSGT00940000160992	ENSGT00940000160504	ENSGT00940000167209	ENSGT00940000156761 #27	ENSGT00410000025596.a.b #26	ENSGT00390000002144 #25	ENSGT00940000164873	ENSGT00950000183215.c.b	ENSGT00940000164027	ENSGT00940000159312	ENSGT00940000157118.c.a	ENSGT00390000016613.c
Phasianidae_b	ANCESTRAL SPECIES	23	ENSGT00940000160747	ENSGT00940000156338	ENSGT00950000182900.B	ENSGT00390000007371	ENSGT00940000160932	ENSGT00940000159398	ENSGT00960000189365	ENSGT00950000182962.b.a	ENSGT00390000018883	ENSGT00940000157554 #7	ENSGT00940000163923.f	ENSGT00940000163923.e	ENSGT00940000160073 #8	ENSGT00950000183168.B.a #19	ENSGT00940000157582 #21	ENSGT00940000155543 #22	ENSGT00940000157669 #28	ENSGT00940000157034	ENSGT00940000161085	ENSGT00940000160992	ENSGT00940000160504	ENSGT00940000156761 #27	ENSGT00410000025596.a.b #26	ENSGT00390000002144 #25	ENSGT00940000164873	ENSGT00950000183215.c.b	ENSGT00940000164027	ENSGT00940000159312	ENSGT00940000157118.c.a	ENSGT00390000016613.c	ENSGT00950000182844.a.b
Chicken	MODERN SPECIES	15	TENT5B (ENSGALG00010012654)	SLC9A1 (ENSGALG00010016793)	WDTC1 (ENSGALG00010016799)	TMEM222 (ENSGALG00010016802)	SYTL1 (ENSGALG00010016809)	MAP3K6 (ENSGALG00010016816)	ENSGALG00010016825	WASF2 (ENSGALG00010016849)	AHDC1 (ENSGALG00010016852)	FGR (ENSGALG00010016861) #7	ENSGALG00010018329	ENSGALG00010016870	FAM76A (ENSGALG00010018339) #8	SESN2 (ENSGALG00010016875) #19	PHACTR4 (ENSGALG00010016925) #21	RCC1 (ENSGALG00010016936) #22	OPRD1 (ENSGALG00010016944) #28	TCEA3 (ENSGALG00010016543)	ASAP3 (ENSGALG00010016556)	E2F2 (ENSGALG00010016567)	ID3 (ENSGALG00010016447)	ENSGALG00010015185	YTHDF2 (ENSGALG00010015166) #27	ENSGALG00010015248	GMEB1 (ENSGALG00010015314) #26	TAF12 (ENSGALG00010015384) #25	ENSGALG00010015440	MTFR1L (ENSGALG00010015486)	SELENON (ENSGALG00010015516)	MAN1C1 (ENSGALG00010015573)	LDLRAP1 (ENSGALG00010015605)
Turkey	MODERN SPECIES	17	ENSMGAG00000004237	ENSMGAG00000004270	GJA4 (ENSMGAG00000016540)	SMIM12 (ENSMGAG00000015709)	ENSMGAG00000004308	ENSMGAG00000021151	GJB3 (ENSMGAG00000022402)	ENSMGAG00000017784	ENSMGAG00000004314	ENSMGAG00000022234	ENSMGAG00000019066	ENSMGAG00000018005	ENSMGAG00000007923	ENSMGAG00000003845	ENSMGAG00000022036	ENSMGAG00000009632 #22	ENSMGAG00000001596 #28	ENSMGAG00000016573 #21	ENSMGAG00000001699 #8	ENSMGAG00000001535	SDC3 (ENSMGAG00000000717) #34	ENSMGAG00000021607 #35	ENSMGAG00000000724 #35	ENSMGAG00000019520	ENSMGAG00000021083 #36	SNRNP40 (ENSMGAG00000000765)	ENSMGAG00000000794	ENSMGAG00000000777	ENSMGAG00000018093	ENSMGAG00000019972	SERINC2 (ENSMGAG00000000799)
Japanese quail	MODERN SPECIES	15	ENSCJPG00005016026	TENT5B (ENSCJPG00005016028)	SLC9A1 (ENSCJPG00005016029)	WDTC1 (ENSCJPG00005016030)	TMEM222 (ENSCJPG00005016031)	ENSCJPG00005016032	ENSCJPG00005016033	WASF2 (ENSCJPG00005016036)	AHDC1 (ENSCJPG00005016038)	FGR (ENSCJPG00005016042) #7	ENSCJPG00005016044	ENSCJPG00005016045	FAM76A (ENSCJPG00005016099) #8	SESN2 (ENSCJPG00005016100) #19	PHACTR4 (ENSCJPG00005016101) #21	RCC1 (ENSCJPG00005016103) #22	OPRD1 (ENSCJPG00005016105) #28	TCEA3 (ENSCJPG00005016106)	ASAP3 (ENSCJPG00005016116)	E2F2 (ENSCJPG00005016258)	ID3 (ENSCJPG00005016260)	ENSCJPG00005016261	YTHDF2 (ENSCJPG00005016262) #27	GMEB1 (ENSCJPG00005016263) #26	ENSCJPG00005016267	TAF12 (ENSCJPG00005016269) #25	ENSCJPG00005016270	MTFR1L (ENSCJPG00005016271)	ENSCJPG00005016272	MAN1C1 (ENSCJPG00005016273)	LDLRAP1 (ENSCJPG00005016298)
Neognathae_b	ANCESTRAL SPECIES	26	ENSGT00940000156338	ENSGT00950000182900.B	ENSGT00390000007371	ENSGT00940000160932	ENSGT00940000159398	ENSGT00530000063929.a.b	ENSGT01060000248564.b.a.a.a	ENSGT00950000182962.b.a	ENSGT00390000018883	ENSGT00940000157554 #7	ENSGT00940000163923.f	ENSGT00940000163923.e	ENSGT00940000160073 #8	ENSGT00950000183168.B.a #19	ENSGT00940000157582 #21	ENSGT00940000155543 #22	ENSGT00940000157669 #28	ENSGT00940000157034	ENSGT00940000161085	ENSGT00940000160992	ENSGT00940000160504	ENSGT00940000167209	ENSGT00940000156761 #27	ENSGT00410000025596.a.b #26	ENSGT00390000002144 #25	ENSGT00940000164873	ENSGT00940000162094 #23	ENSGT00940000156139.ab #24	ENSGT00940000155019.a.a	ENSGT00940000157833 #29	ENSGT00530000063698.b
Neognathae_c	ANCESTRAL SPECIES	10	ENSGT00940000160723	ENSGT00940000158213	ENSGT00390000011776	ENSGT00390000000510	ENSGT00390000007279	ENSGT00940000157966	ENSGT00530000063320.B	ENSGT00940000156226	ENSGT00940000164855	ENSGT00940000155462	ENSGT00940000163923.f	ENSGT00940000163923.e	ENSGT00940000160073 #8	ENSGT00950000183168.B.a #19	ENSGT00940000157582 #21	ENSGT00940000155543 #22	ENSGT00940000157669 #28	ENSGT00940000157034.v	ENSGT00940000161085	ENSGT00940000160992	ENSGT00940000160504	ENSGT00940000167209	ENSGT00940000156761 #27	ENSGT00410000025596.a.b #26	ENSGT00390000002144 #25	ENSGT00940000164873	ENSGT00940000162094 #23	ENSGT00940000156139.ab #24	ENSGT00940000155019.a.a	ENSGT00940000157833 #29	ENSGT00530000063698.b
Golden eagle	MODERN SPECIES	7	SLC9A1 (ENSACCG00020009844)	WDTC1 (ENSACCG00020009856)	TMEM222 (ENSACCG00020009875)	SYTL1 (ENSACCG00020009888)	MAP3K6 (ENSACCG00020010161)	ENSACCG00020010410	GPR3 (ENSACCG00020010424)	WASF2 (ENSACCG00020010443)	AHDC1 (ENSACCG00020010469)	ENSACCG00020010496	ENSACCG00020010553	ENSACCG00020010590	FAM76A (ENSACCG00020010617) #8	SESN2 (ENSACCG00020010646) #19	PHACTR4 (ENSACCG00020010676) #21	RCC1 (ENSACCG00020010714) #22	OPRD1 (ENSACCG00020010727) #28	ENSACCG00020010744	ENSACCG00020010764	ASAP3 (ENSACCG00020010776)	E2F2 (ENSACCG00020010796)	ID3 (ENSACCG00020010811)	ENSACCG00020010823	YTHDF2 (ENSACCG00020010834) #27	GMEB1 (ENSACCG00020010845) #26	ENSACCG00020010861	TAF12 (ENSACCG00020010879) #25	ENSACCG00020010889	RAB42 (ENSACCG00020010898) #23	TRNAU1AP (ENSACCG00020008893) #24	ENSACCG00020008918
Kakapo	MODERN SPECIES	6			TENT5B (ENSSHBG00005007375)	SLC9A1 (ENSSHBG00005007382)	WDTC1 (ENSSHBG00005007394)	TMEM222 (ENSSHBG00005007411)	CD164L2 (ENSSHBG00005007438)	GPR3 (ENSSHBG00005007451)	WASF2 (ENSSHBG00005007459)	ENSSHBG00005007489	ENSSHBG00005007587	ENSSHBG00005007623	FAM76A (ENSSHBG00005007686) #8	SESN2 (ENSSHBG00005007712) #19	PHACTR4 (ENSSHBG00005007730) #21	RCC1 (ENSSHBG00005007765) #22	OPRD1 (ENSSHBG00005007780) #28	TCEA3 (ENSSHBG00005007790)	ENSSHBG00005007799	ASAP3 (ENSSHBG00005008310)	E2F2 (ENSSHBG00005017450)	ENSSHBG00005017452	ID3 (ENSSHBG00005017453)	YTHDF2 (ENSSHBG00005017454) #27	GMEB1 (ENSSHBG00005017456) #26	ENSSHBG00005017458	TAF12 (ENSSHBG00005017463) #25	ENSSHBG00005017467	TRNAU1AP (ENSSHBG00005000886) #24	ENSSHBG00005005399	LUZP1 (ENSSHBG00005005420)
Passeriformes	ANCESTRAL SPECIES	23	ENSGT00390000017418	ENSGT00940000160747	ENSGT00940000156338	ENSGT00950000182900.B	ENSGT00390000007371	ENSGT00940000160932	ENSGT00530000063929.a.b	ENSGT01060000248564.b.a.a.a	ENSGT00950000182962.b.a	ENSGT00390000018883	ENSGT00940000157554 #7	ENSGT00940000163923.f	ENSGT00940000160073 #8	ENSGT00950000183168.B.a #19	ENSGT00940000157582 #21	ENSGT00940000155543 #22	ENSGT00940000157669 #28	ENSGT00940000157034	ENSGT00940000161085	ENSGT00940000160992	ENSGT00940000160504
Great tit	MODERN SPECIES	15	NUDC (ENSPMJG00000018420)	KDF1 (ENSPMJG00000018421)	TENT5B (ENSPMJG00000018423)	SLC9A1 (ENSPMJG00000018424)	WDTC1 (ENSPMJG00000018425)	TMEM222 (ENSPMJG00000018426)	SYTL1 (ENSPMJG00000018427)	ENSPMJG00000018428	WASF2 (ENSPMJG00000018431)	AHDC1 (ENSPMJG00000018432)	FGR (ENSPMJG00000018435) #7	ENSPMJG00000018436	FAM76A (ENSPMJG00000018437) #8	SESN2 (ENSPMJG00000018438) #19	PHACTR4 (ENSPMJG00000018439) #21	RCC1 (ENSPMJG00000018440) #22	OPRD1 (ENSPMJG00000018442) #28	TCEA3 (ENSPMJG00000018443)	ENSPMJG00000018444	E2F2 (ENSPMJG00000018445)	ID3 (ENSPMJG00000018446)	LDLRAP1 (ENSPMJG00000000050)	ENSPMJG00000000086	MACO1 (ENSPMJG00000000097)	ENSPMJG00000000112	TMEM50A (ENSPMJG00000000129)	RSRP1 (ENSPMJG00000000148)	SYF2 (ENSPMJG00000000170)	ENSPMJG00000000184	RUNX3 (ENSPMJG00000000197)	CLIC4 (ENSPMJG00000000208)
Passeriformes_d	ANCESTRAL SPECIES	23	ENSGT00390000017418	ENSGT00940000160747	ENSGT00940000156338	ENSGT00950000182900.B	ENSGT00390000007371	ENSGT00940000160932	ENSGT00530000063929.a.b	ENSGT01060000248564.b.a.a.a	ENSGT00950000182962.b.a	ENSGT00390000018883	ENSGT00940000157554 #7	ENSGT00940000163923.f	ENSGT00940000160073 #8	ENSGT00950000183168.B.a #19	ENSGT00940000157582 #21	ENSGT00940000155543 #22	ENSGT00940000157669 #28	ENSGT00940000157034	ENSGT00940000161085	ENSGT00940000160992	ENSGT00940000160504
Passeriformes_g	ANCESTRAL SPECIES	22	ENSGT00940000160747.a	ENSGT00940000160747.b.a	ENSGT00940000156338	ENSGT00950000182900.B	ENSGT00390000007371	ENSGT00940000160932	ENSGT00530000063929.a.b	ENSGT01060000248564.b.a.a.a	ENSGT00950000182962.b.a	ENSGT00390000018883	ENSGT00940000157554 #7	ENSGT00940000163923.f	ENSGT00940000160073 #8	ENSGT00950000183168.B.a #19	ENSGT00940000157582 #21	ENSGT00940000155543 #22	ENSGT00940000157669 #28	ENSGT00940000157034	ENSGT00940000165326	ENSGT00940000160992	ENSGT00940000160504
Medium ground finch	MODERN SPECIES	139	GPN2 (ENSGFOG00000006290)	GPATCH3 (ENSGFOG00000006273)	NUDC (ENSGFOG00000006257)	KDF1 (ENSGFOG00000006243)	TENT5B (ENSGFOG00000006235)	SLC9A1 (ENSGFOG00000006232)	WDTC1 (ENSGFOG00000006223)	TMEM222 (ENSGFOG00000006214)	CD164L2 (ENSGFOG00000006209)	WASF2 (ENSGFOG00000006201)	FGR (ENSGFOG00000006174) #7	ENSGFOG00000006139	FAM76A (ENSGFOG00000006127) #8	SESN2 (ENSGFOG00000006120) #19	PHACTR4 (ENSGFOG00000006113) #21	RCC1 (ENSGFOG00000006100) #22	ID3 (ENSGFOG00000006093)	E2F2 (ENSGFOG00000006080)	ENSGFOG00000006066	TCEA3 (ENSGFOG00000006059)	OPRD1 (ENSGFOG00000006052) #28
Passeroidea	ANCESTRAL SPECIES	22	ENSGT00940000160747.a	ENSGT00940000160747.b.a	ENSGT00940000156338	ENSGT00950000182900.B	ENSGT00390000007371	ENSGT00940000160932	ENSGT00530000063929.a.b	ENSGT01060000248564.b.a.a.a	ENSGT00950000182962.b.a	ENSGT00390000018883	ENSGT00940000157554 #7	ENSGT00940000163923.f	ENSGT00940000160073 #8	ENSGT00950000183168.B.a #19	ENSGT00940000157582 #21	ENSGT00940000155543 #22	ENSGT00940000157669 #28	ENSGT00940000157034	ENSGT00940000165326	ENSGT00940000160992	ENSGT00940000160504
Zebra finch	MODERN SPECIES	16	KDF1 (ENSTGUG00000000978)	TRNP1 (ENSTGUG00000027930)	TENT5B (ENSTGUG00000000977)	SLC9A1 (ENSTGUG00000000976)	WDTC1 (ENSTGUG00000000973)	SYTL1 (ENSTGUG00000025002)	ENSTGUG00000023189	GPR3 (ENSTGUG00000000969)	WASF2 (ENSTGUG00000000966)	AHDC1 (ENSTGUG00000022877)	ENSTGUG00000000957	ENSTGUG00000000955	FAM76A (ENSTGUG00000000951) #8	SESN2 (ENSTGUG00000000945) #19	PHACTR4 (ENSTGUG00000000943) #21	RCC1 (ENSTGUG00000000940) #22	OPRD1 (ENSTGUG00000000934) #28	TCEA3 (ENSTGUG00000000930)	ENSTGUG00000000911	E2F2 (ENSTGUG00000000907)	ID3 (ENSTGUG00000000904)	HNRNPR (ENSTGUG00000000880)	ENSTGUG00000000899	DNAJC8 (ENSTGUG00000000890) #17	PTAFR (ENSTGUG00000023079) #16	EYA3 (ENSTGUG00000000872) #15	XKR8 (ENSTGUG00000000870) #14	RPA2 (ENSTGUG00000000866) #12	SMPDL3B (ENSTGUG00000000856) #13	PPP1R8 (ENSTGUG00000000851) #10	STX12 (ENSTGUG00000000844) #9
Common canary	MODERN SPECIES	65	KDF1 (ENSSCAG00000007336)	ENSSCAG00000007342	SLC9A1 (ENSSCAG00000007437)	WDTC1 (ENSSCAG00000007881)	TMEM222 (ENSSCAG00000007892)	SYTL1 (ENSSCAG00000007895)	ENSSCAG00000007899	GPR3 (ENSSCAG00000007910)	WASF2 (ENSSCAG00000007921)	AHDC1 (ENSSCAG00000007925)	FGR (ENSSCAG00000007933) #7	ENSSCAG00000007964	FAM76A (ENSSCAG00000007969) #8	SESN2 (ENSSCAG00000007973) #19	PHACTR4 (ENSSCAG00000007987) #21	RCC1 (ENSSCAG00000007998) #22	OPRD1 (ENSSCAG00000008006) #28	TCEA3 (ENSSCAG00000008008)	ENSSCAG00000008039	E2F2 (ENSSCAG00000008329)	ID3 (ENSSCAG00000008336)
Flycatcher	MODERN SPECIES	15	NR0B2 (ENSFALG00000006497)	NUDC (ENSFALG00000006516)	KDF1 (ENSFALG00000006529)	TENT5B (ENSFALG00000014519)	SLC9A1 (ENSFALG00000000683)	ENSFALG00000023022	WDTC1 (ENSFALG00000000691)	SYTL1 (ENSFALG00000000694)	CD164L2 (ENSFALG00000023339)	GPR3 (ENSFALG00000000702)	WASF2 (ENSFALG00000000708)	FGR (ENSFALG00000002793) #7	ENSFALG00000002817	SESN2 (ENSFALG00000010708) #19	PHACTR4 (ENSFALG00000010715) #21	RCC1 (ENSFALG00000010730) #22	TCEA3 (ENSFALG00000010750)	ASAP3 (ENSFALG00000010769)	E2F2 (ENSFALG00000010803)	ID3 (ENSFALG00000010806)
African ostrich	MODERN SPECIES	1061									ENSSCUG00000019140	ENSSCUG00000019141	ENSSCUG00000019142	ENSSCUG00000019143	FAM76A (ENSSCUG00000019144) #8	SESN2 (ENSSCUG00000019145) #19	PHACTR4 (ENSSCUG00000019146) #21	RCC1 (ENSSCUG00000019147) #22	OPRD1 (ENSSCUG00000019150) #28	ENSSCUG00000019151	E2F2 (ENSSCUG00000019152)	CATSPER4 (ENSSCUG00000019153)
Australian saltwater crocodile	MODERN SPECIES	58	ENSCPRG00005003408	SYTL1 (ENSCPRG00005003362)	MAP3K6 (ENSCPRG00005003286)	CD164L2 (ENSCPRG00005003266)	GPR3 (ENSCPRG00005003261)	WASF2 (ENSCPRG00005003258)	AHDC1 (ENSCPRG00005003254)	ENSCPRG00005003238	ENSCPRG00005003225	ENSCPRG00005003223	ENSCPRG00005003220	ENSCPRG00005003204	FAM76A (ENSCPRG00005003198) #8	SESN2 (ENSCPRG00005003191) #19	PHACTR4 (ENSCPRG00005003163) #21	RCC1 (ENSCPRG00005003145) #22	OPRD1 (ENSCPRG00005003124) #28	TCEA3 (ENSCPRG00005003102)	ASAP3 (ENSCPRG00005003050)	E2F2 (ENSCPRG00005003031)	CATSPER4 (ENSCPRG00005003024)	YTHDF2 (ENSCPRG00005003013) #27	ENSCPRG00005003009	CCT8L2 (ENSCPRG00005003003)	RHBDL2 (ENSCPRG00005002996)	GJA9 (ENSCPRG00005002991)	MYCBP (ENSCPRG00005002986)	RRAGC (ENSCPRG00005002919)	ENSCPRG00005002914	UTP11 (ENSCPRG00005002913)	FHL3 (ENSCPRG00005002908)
Cryptodira	ANCESTRAL SPECIES	50												ENSGT00940000161215.hc.b	ENSGT00940000160073 #8	ENSGT00950000183168.B.a #19	ENSGT00940000157582 #21	ENSGT00940000155543 #22	ENSGT00940000157669 #28	ENSGT00990000210108	ENSGT00940000157034	ENSGT00940000161085	ENSGT00940000160992	ENSGT00940000161879	ENSGT00940000160504	ENSGT00940000167209	ENSGT00940000156761 #27	ENSGT00410000025596.a.b #26	ENSGT00390000002144 #25	ENSGT00940000164873	ENSGT00940000162094 #23	ENSGT00940000156139.ab #24	ENSGT00940000155019.a.a
Testudinoidea	ANCESTRAL SPECIES	12	ENSGT00390000007279	ENSGT00940000157966	ENSGT00530000063320.B	ENSGT00940000156226	ENSGT00940000164855	ENSGT00940000155462	ENSGT00940000163923.f	ENSGT00940000163923.e.d	ENSGT00940000163923.e.c	ENSGT00940000163282.j	ENSGT00940000163178	ENSGT00940000161215.hc.b	ENSGT00940000160073 #8	ENSGT00950000183168.B.a #19	ENSGT00940000157582 #21	ENSGT00940000155543 #22	ENSGT00940000157669 #28	ENSGT00990000210108	ENSGT00940000157034	ENSGT00940000161085	ENSGT00940000160992	ENSGT00940000161879	ENSGT00940000160504	ENSGT00940000167209	ENSGT00940000156761 #27	ENSGT00410000025596.a.b #26	ENSGT00390000002144 #25	ENSGT00940000164873	ENSGT00940000162094 #23	ENSGT00940000156139.ab #24	ENSGT00940000155019.a.a
Emydidae	ANCESTRAL SPECIES	8	ENSGT00390000007279	ENSGT00940000157966	ENSGT00530000063320.B	ENSGT00940000156226	ENSGT00940000164855	ENSGT00940000155462	ENSGT00940000163923.f	ENSGT00940000163923.e.d	ENSGT00940000163923.e.c	ENSGT00940000163282.j	ENSGT00940000163178	ENSGT00940000161215.hc.b	ENSGT00940000160073 #8	ENSGT00950000183168.B.a #19	ENSGT00940000157582 #21	ENSGT00940000155543 #22	ENSGT00940000157669 #28	ENSGT00990000210108	ENSGT00940000157034	ENSGT00940000161085	ENSGT00940000160992	ENSGT00940000161879	ENSGT00940000160504	ENSGT00940000167209	ENSGT00940000156761 #27	ENSGT00410000025596.a.b #26	ENSGT00390000002144 #25	ENSGT00940000164873	ENSGT00940000162094 #23	ENSGT00940000156139.ab #24	ENSGT00940000155019.a.a
Three-toed box turtle	MODERN SPECIES	111	GPR3 (ENSTMTG00000012809)	WASF2 (ENSTMTG00000012789)	ENSTMTG00000012779	AHDC1 (ENSTMTG00000012770)	ENSTMTG00000012746	ENSTMTG00000012717	ENSTMTG00000012703	ENSTMTG00000012689	ENSTMTG00000012680	ENSTMTG00000012637	IFI6 (ENSTMTG00000012623)	ENSTMTG00000012595	FAM76A (ENSTMTG00000012563) #8	SESN2 (ENSTMTG00000012540) #19	PHACTR4 (ENSTMTG00000012459) #21	RCC1 (ENSTMTG00000012408) #22	OPRD1 (ENSTMTG00000012388) #28	ENSTMTG00000012357	ENSTMTG00000012345	ENSTMTG00000012313	ENSTMTG00000012260	E2F2 (ENSTMTG00000012225)	CATSPER4 (ENSTMTG00000012107)	ID3 (ENSTMTG00000012078)	ENSTMTG00000012062	YTHDF2 (ENSTMTG00000012040) #27	GMEB1 (ENSTMTG00000012025) #26	ENSTMTG00000011990	TAF12 (ENSTMTG00000011959) #25	ENSTMTG00000011945	RAB42 (ENSTMTG00000011941) #23
painted turtle	MODERN SPECIES	713												ENSCPBG00000011190	FAM76A (ENSCPBG00000011191) #8	SESN2 (ENSCPBG00000011193) #19	PHACTR4 (ENSCPBG00000011194) #21	RCC1 (ENSCPBG00000011198) #22	OPRD1 (ENSCPBG00000011201) #28	ENSCPBG00000011202	ENSCPBG00000011203	ENSCPBG00000011204	ENSCPBG00000011205	ENSCPBG00000011206	ENSCPBG00000011207	ASAP3 (ENSCPBG00000011209)	E2F2 (ENSCPBG00000011214)	CATSPER4 (ENSCPBG00000011215)	ID3 (ENSCPBG00000011218)	ENSCPBG00000011219	YTHDF2 (ENSCPBG00000011221) #27	GMEB1 (ENSCPBG00000011222) #26	ENSCPBG00000011226
Testudinidae	ANCESTRAL SPECIES	53	ENSGT00940000157531.k	ENSGT00530000063929.a.b	ENSGT01060000248564.b.a.a.a	ENSGT00950000182962.b.a	ENSGT00390000018883	ENSGT00940000157554 #7	ENSGT00940000163923.f	ENSGT00940000163923.e.d	ENSGT00940000163923.e.c	ENSGT00940000163282.j	ENSGT00940000163178	ENSGT00940000161215.hc.b	ENSGT00940000160073 #8	ENSGT00950000183168.B.a #19	ENSGT00940000157582 #21	ENSGT00940000155543 #22	ENSGT00940000157669 #28	ENSGT00940000157034	ENSGT00940000161085	ENSGT00940000160992	ENSGT00940000161879	ENSGT00940000160504	ENSGT00940000167209	ENSGT00940000156761 #27	ENSGT00410000025596.a.b #26	ENSGT00390000002144 #25	ENSGT00940000164873	ENSGT00940000162094 #23	ENSGT00940000156139.ab #24	ENSGT00940000155019.a.a	ENSGT00940000157833 #29
Abingdon island giant tortoise	MODERN SPECIES	2225	GPR3 (ENSCABG00000009844)	WASF2 (ENSCABG00000009843)	AHDC1 (ENSCABG00000009842)	FGR (ENSCABG00000009837) #7	ENSCABG00000009835	ENSCABG00000009830	ENSCABG00000009828	ENSCABG00000009827	IFI6 (ENSCABG00000009824)	ENSCABG00000009820	FAM76A (ENSCABG00000009817) #8	SESN2 (ENSCABG00000009813) #19	ENSCABG00000009810	ENSCABG00000009809	PHACTR4 (ENSCABG00000009807) #21	RCC1 (ENSCABG00000009802) #22	OPRD1 (ENSCABG00000009799) #28	ENSCABG00000009795	ENSCABG00000009793	ENSCABG00000009791	ASAP3 (ENSCABG00000009781)	E2F2 (ENSCABG00000009772)	CATSPER4 (ENSCABG00000009764)	ID3 (ENSCABG00000009760)	ENSCABG00000009758	YTHDF2 (ENSCABG00000009756) #27	GMEB1 (ENSCABG00000009700) #26	ENSCABG00000009697	TAF12 (ENSCABG00000009693) #25	ENSCABG00000009691	RAB42 (ENSCABG00000009620) #23
Goode s thornscrub tortoise	MODERN SPECIES	12	SYTL1 (ENSGEVG00005004336)	MAP3K6 (ENSGEVG00005004395)	ENSGEVG00005004509	CD164L2 (ENSGEVG00005004553)	GPR3 (ENSGEVG00005004575)	WASF2 (ENSGEVG00005004635)	AHDC1 (ENSGEVG00005004682)	FGR (ENSGEVG00005004709) #7	ENSGEVG00005004746	ENSGEVG00005004770	ENSGEVG00005004831	ENSGEVG00005004911	ENSGEVG00005004945	SESN2 (ENSGEVG00005005043) #19	PHACTR4 (ENSGEVG00005005142) #21	RCC1 (ENSGEVG00005005188) #22	OPRD1 (ENSGEVG00005005214) #28	ENSGEVG00005005245	ENSGEVG00005005264	ENSGEVG00005005311	ENSGEVG00005005358	E2F2 (ENSGEVG00005005385)	CATSPER4 (ENSGEVG00005005464)	ID3 (ENSGEVG00005005643)	ENSGEVG00005005669	YTHDF2 (ENSGEVG00005005693) #27	GMEB1 (ENSGEVG00005005710) #26	TAF12 (ENSGEVG00005005747) #25	ENSGEVG00005005767	RAB42 (ENSGEVG00005005806) #23	TRNAU1AP (ENSGEVG00005005844) #24
Chinese turtle	MODERN SPECIES	933												ENSPSIG00000001652	FAM76A (ENSPSIG00000013722) #8	SESN2 (ENSPSIG00000010507) #19	PHACTR4 (ENSPSIG00000009190) #21	RCC1 (ENSPSIG00000009106) #22
Lepidosauria	ANCESTRAL SPECIES	18	ENSGT00940000160932	ENSGT00940000159398	ENSGT00940000157531	ENSGT00530000063929.a.b	ENSGT01060000248564.b.a.a.a	ENSGT00950000182962.b.a	ENSGT00390000018883	ENSGT00940000157554 #7	ENSGT00940000163923.f	ENSGT00940000163923.e	ENSGT00940000163282.k.a	ENSGT00940000160073 #8	ENSGT00950000183168.B.a #19	ENSGT00390000003312 #20	ENSGT00940000157582 #21	ENSGT00940000155543 #22	ENSGT00940000157669 #28	ENSGT00940000157034	ENSGT00940000161085	ENSGT00940000160992.b	ENSGT00940000161879	ENSGT00940000160504	ENSGT00940000167209	ENSGT00940000156761 #27	ENSGT01100000263839	ENSGT00410000025596.a.b #26	ENSGT00390000002144 #25	ENSGT00940000164873	ENSGT00940000162094 #23	ENSGT00940000156139.ab #24	ENSGT00940000155019.a.a
Episquamata	ANCESTRAL SPECIES	7	ENSGT00940000160932	ENSGT00940000159398	ENSGT00940000157531	ENSGT00530000063929.a.b	ENSGT01060000248564.b.a.a.a	ENSGT00950000182962.b.a	ENSGT00390000018883	ENSGT00940000157554 #7	ENSGT00940000163923.f	ENSGT00940000163923.e	ENSGT00940000163282.k.a	ENSGT00940000160073 #8	ENSGT00950000183168.B.a #19	ENSGT00390000003312 #20	ENSGT00940000157582 #21	ENSGT00940000155543 #22	ENSGT00940000157669 #28	ENSGT00940000157034	ENSGT00940000161085	ENSGT00940000160992.b	ENSGT00940000161879	ENSGT00940000160504	ENSGT00940000167209	ENSGT00940000156761 #27	ENSGT01100000263839	ENSGT00410000025596.a.b #26	ENSGT00390000002144 #25	ENSGT00940000164873	ENSGT00940000162094 #23	ENSGT00940000156139.ab #24	ENSGT00940000155019.a.a
Toxicofera	ANCESTRAL SPECIES	24	ENSGT00390000007371	ENSGT00940000154868.a.b	ENSGT00940000160932	ENSGT00940000159398	ENSGT00530000063929.a.b	ENSGT01060000248564.b.a.a.a	ENSGT00950000182962.b.a	ENSGT00390000018883	ENSGT00940000157554 #7	ENSGT00940000163923.f	ENSGT00940000163923.e	ENSGT00940000160073 #8	ENSGT00950000183168.B.a #19	ENSGT00390000003312 #20	ENSGT00940000157582 #21	ENSGT00940000155543 #22	ENSGT00940000157669 #28	ENSGT00940000157034	ENSGT00940000161085	ENSGT00940000160992.b	ENSGT00940000160992.a	ENSGT00940000161879	ENSGT00940000160504	ENSGT00940000167209	ENSGT00940000156761 #27	ENSGT01100000263839	ENSGT00410000025596.a.b #26	ENSGT00390000002144 #25	ENSGT00940000164873	ENSGT00940000162094 #23	ENSGT00940000156139.ab #24
Elapidae	ANCESTRAL SPECIES	9	ENSGT00390000007371	ENSGT00940000154868.a.b	ENSGT00940000160932	ENSGT00940000159398.g	ENSGT00530000063929.a.b	ENSGT01060000248564.b.a.a.a	ENSGT00950000182962.b.a	ENSGT00390000018883	ENSGT00940000157554 #7	ENSGT00940000163923.f	ENSGT00940000163923.e	ENSGT00940000160073 #8	ENSGT00950000183168.B.a #19	ENSGT00390000003312 #20	ENSGT00940000157582.a #21	ENSGT00940000155543 #22	ENSGT00940000157669 #28	ENSGT00940000157034	ENSGT00940000161085	ENSGT00940000160992.b	ENSGT00940000161879	ENSGT00940000160504	ENSGT00940000167209	ENSGT00940000156761.e #27	ENSGT01100000263839	ENSGT00940000156761.f #27	ENSGT00410000025596.a.b #26	ENSGT00390000002144 #25	ENSGT00940000164873	ENSGT00940000162094 #23	ENSGT01010000229478
Elapidae_a	ANCESTRAL SPECIES	15	ENSGT00390000007371	ENSGT00940000154868.a.b	ENSGT00940000160932	ENSGT00940000159398.g	ENSGT00960000189365	ENSGT01060000248564.b.a.a.a	ENSGT00950000182962.b.a	ENSGT00390000018883	ENSGT00940000157554 #7	ENSGT00940000163923.f	ENSGT00940000163923.e	ENSGT00940000160073 #8	ENSGT00950000183168.B.a #19	ENSGT00390000003312 #20	ENSGT00940000157582.a #21	ENSGT00940000155543 #22	ENSGT00940000157669 #28	ENSGT00940000157034	ENSGT00940000161085	ENSGT00940000160992.b	ENSGT00940000160992.a	ENSGT00940000161879	ENSGT00940000160504	ENSGT00940000167209	ENSGT00940000156761.e #27	ENSGT01100000263839	ENSGT00410000025596.a.b #26	ENSGT00940000157334	ENSGT00390000002144 #25	ENSGT00940000164873	ENSGT00940000162094 #23
Acanthophiinae	ANCESTRAL SPECIES	22	ENSGT00390000007371	ENSGT00940000154868.a.b	ENSGT00940000160932	ENSGT00940000159398.g	ENSGT00960000189365	ENSGT01060000248564.b.a.a.a	ENSGT00950000182962.b.a	ENSGT00390000018883	ENSGT00940000157554 #7	ENSGT00940000163923.f	ENSGT00940000163923.e	ENSGT00940000160073 #8	ENSGT00950000183168.B.a #19	ENSGT00390000003312 #20	ENSGT00940000157582.a #21	ENSGT00940000155543 #22	ENSGT00940000157669 #28	ENSGT00940000157034	ENSGT00940000161085	ENSGT00940000160992.b	ENSGT00940000160992.a	ENSGT00940000161879	ENSGT00940000160504	ENSGT00940000167209	ENSGT00940000156761.e #27	ENSGT01100000263839	ENSGT00410000025596.a.b #26	ENSGT00390000002144 #25	ENSGT00940000164873	ENSGT00940000162094 #23	ENSGT01010000229478
Mainland tiger snake	MODERN SPECIES	80	WDTC1 (ENSNSUG00000013895)	TMEM222 (ENSNSUG00000013896)	ENSNSUG00000013897	SYTL1 (ENSNSUG00000013898)	ENSNSUG00000013899	GPR3 (ENSNSUG00000013900)	WASF2 (ENSNSUG00000013901)	AHDC1 (ENSNSUG00000013903)	ENSNSUG00000013905	ENSNSUG00000013906	ENSNSUG00000013907	FAM76A (ENSNSUG00000013908) #8	MED18 (ENSNSUG00000013910) #20	ENSNSUG00000013911 #21	ENSNSUG00000013912 #21	RCC1 (ENSNSUG00000013917) #22	OPRD1 (ENSNSUG00000013918) #28	ENSNSUG00000013922	ENSNSUG00000013923	ASAP3 (ENSNSUG00000013924)	E2F2 (ENSNSUG00000014009)	ID3 (ENSNSUG00000014010)	ENSNSUG00000014011	ENSNSUG00000014013 #27	ENSNSUG00000014014	GMEB1 (ENSNSUG00000014015) #26	TAF12 (ENSNSUG00000014023) #25	ENSNSUG00000014024	TRNAU1AP (ENSNSUG00000014043) #24	ENSNSUG00000014044	EPB41 (ENSNSUG00000014045) #29
Eastern brown snake	MODERN SPECIES	19	TMEM222 (ENSPTXG00000005490)	ENSPTXG00000005488	SYTL1 (ENSPTXG00000005487)	MAP3K6 (ENSPTXG00000005442)	ENSPTXG00000005429	GPR3 (ENSPTXG00000005428)	WASF2 (ENSPTXG00000005425)	AHDC1 (ENSPTXG00000005424)	FGR (ENSPTXG00000005421) #7	ENSPTXG00000005419	ENSPTXG00000005416	FAM76A (ENSPTXG00000005413) #8	SESN2 (ENSPTXG00000005410) #19	MED18 (ENSPTXG00000005408) #20	PHACTR4 (ENSPTXG00000005405) #21	RCC1 (ENSPTXG00000005400) #22	OPRD1 (ENSPTXG00000005399) #28	ENSPTXG00000005398	ENSPTXG00000005396	ASAP3 (ENSPTXG00000005395)	ENSPTXG00000005393	ENSPTXG00000005389	CATSPER4 (ENSPTXG00000005377)	ID3 (ENSPTXG00000005376)	ENSPTXG00000005374	ENSPTXG00000005370 #27	GMEB1 (ENSPTXG00000005369) #26	TAF12 (ENSPTXG00000005367) #25	ENSPTXG00000005366	ENSPTXG00000005365 #23	ENSPTXG00000005364
Blue-lipped sea krait	MODERN SPECIES	4424																RCC1 (ENSLLTG00000007108) #22
Indian cobra	MODERN SPECIES	11	TMEM222 (ENSNNAG00000003679)	ENSNNAG00000003700	SYTL1 (ENSNNAG00000003725)	MAP3K6 (ENSNNAG00000003752)	CD164L2 (ENSNNAG00000003877)	GPR3 (ENSNNAG00000003904)	WASF2 (ENSNNAG00000003926)	AHDC1 (ENSNNAG00000003964)	FGR (ENSNNAG00000004005) #7	ENSNNAG00000004086	ENSNNAG00000004121	FAM76A (ENSNNAG00000004205) #8	SESN2 (ENSNNAG00000004318) #19	PHACTR4 (ENSNNAG00000004401) #21	MED18 (ENSNNAG00000004457) #20	RCC1 (ENSNNAG00000004513) #22	OPRD1 (ENSNNAG00000004544) #28	TCEA3 (ENSNNAG00000004558)	ASAP3 (ENSNNAG00000004607)	ENSNNAG00000004689	ENSNNAG00000004700	ENSNNAG00000004723	ID3 (ENSNNAG00000004796)	YTHDF2 (ENSNNAG00000004825) #27	GMEB1 (ENSNNAG00000004843) #26	ENSNNAG00000004892	TAF12 (ENSNNAG00000004920) #25	ENSNNAG00000004943	ENSNNAG00000004959 #23	ENSNNAG00000004983	TRNAU1AP (ENSNNAG00000005026) #24
Lizard	MODERN SPECIES	1495																ENSACAG00000005128 #22	OPRD1 (ENSACAG00000040477) #28	ENSACAG00000005034	ENSACAG00000004855
Laterata	ANCESTRAL SPECIES	27	ENSGT00940000154868.a.b	ENSGT00940000160932	ENSGT00940000159398	ENSGT00940000157531	ENSGT00530000063929.a.b	ENSGT01060000248564.b.a.a.a	ENSGT00950000182962.b.a	ENSGT00390000018883	ENSGT00940000163923.f	ENSGT00940000163923.e	ENSGT00940000163282.k.a	ENSGT00940000160073 #8	ENSGT00950000183168.B.a #19	ENSGT00390000003312 #20	ENSGT00940000157582 #21	ENSGT00940000155543 #22	ENSGT00940000157669 #28	ENSGT00940000157034	ENSGT00940000161085	ENSGT00940000160992.b	ENSGT00940000161879	ENSGT00940000160504	ENSGT00940000167209	ENSGT00940000156761 #27	ENSGT00410000025596.a.b #26	ENSGT00390000002144 #25	ENSGT00940000164873	ENSGT00940000162094 #23	ENSGT00940000156139.ab #24	ENSGT00940000155019.a.a	ENSGT00940000157833 #29
Common wall lizard	MODERN SPECIES	16	SESN2 (ENSPMRG00000009161) #19	FAM76A (ENSPMRG00000009135) #8	ENSPMRG00000009120	ENSPMRG00000009115	ENSPMRG00000009104	ENSPMRG00000009089	ENSPMRG00000009078	AHDC1 (ENSPMRG00000009067)	WASF2 (ENSPMRG00000009056)	GPR3 (ENSPMRG00000009045)	CD164L2 (ENSPMRG00000009039)	ENSPMRG00000009031	MAP3K6 (ENSPMRG00000008995)	SYTL1 (ENSPMRG00000008979)	ENSPMRG00000008962	RCC1 (ENSPMRG00000008955) #22	OPRD1 (ENSPMRG00000008949) #28	ENSPMRG00000008946	TCEA3 (ENSPMRG00000008935)	ASAP3 (ENSPMRG00000008909)	E2F2 (ENSPMRG00000008903)	ENSPMRG00000008896	ENSPMRG00000008893	ENSPMRG00000008891	YTHDF2 (ENSPMRG00000008884) #27	GMEB1 (ENSPMRG00000008864) #26	ENSPMRG00000008846	TAF12 (ENSPMRG00000008840) #25	ENSPMRG00000008838	RAB42 (ENSPMRG00000008831) #23	TRNAU1AP (ENSPMRG00000008815) #24
Argentine black and white tegu	MODERN SPECIES	53	SYTL1 (ENSSMRG00000002437)	MAP3K6 (ENSSMRG00000002451)	ENSSMRG00000002456	CD164L2 (ENSSMRG00000002466)	GPR3 (ENSSMRG00000002473)	WASF2 (ENSSMRG00000002478)	AHDC1 (ENSSMRG00000002496)	ENSSMRG00000002513	ENSSMRG00000002524	ENSSMRG00000002537	ENSSMRG00000002539	FAM76A (ENSSMRG00000002548) #8	SESN2 (ENSSMRG00000002553) #19	MED18 (ENSSMRG00000002592) #20	PHACTR4 (ENSSMRG00000002722) #21	RCC1 (ENSSMRG00000002729) #22	OPRD1 (ENSSMRG00000002731) #28	ENSSMRG00000002734	ENSSMRG00000002735	ASAP3 (ENSSMRG00000002736)	E2F2 (ENSSMRG00000002739)	ENSSMRG00000002742	ID3 (ENSSMRG00000002801)	ENSSMRG00000002803	YTHDF2 (ENSSMRG00000002820) #27	GMEB1 (ENSSMRG00000002821) #26	ENSSMRG00000002828	TAF12 (ENSSMRG00000002837) #25	ENSSMRG00000002838	RAB42 (ENSSMRG00000002842) #23	ENSSMRG00000002843
tuatara	MODERN SPECIES	65														MED18 (ENSSPUG00000009470) #20	PHACTR4 (ENSSPUG00000009480) #21	RCC1 (ENSSPUG00000009530) #22	ENSSPUG00000009587
Anura	ANCESTRAL SPECIES	82	ENSGT00950000182978.B #15	ENSGT01060000248589.D #16	ENSGT00390000012569.a #17	ENSGT00940000158079 #35	ENSGT00940000159949 #36	ENSGT00940000155058	ENSGT00510000047363	ENSGT00940000155104	ENSGT01030000235111	ENSGT01030000234623.a.a.b	ENSGT00940000157218.C	ENSGT00950000183053.A	ENSGT00940000161401	ENSGT00940000157999	ENSGT00910000144179.b.b	ENSGT00940000155543 #22	ENSGT00940000161085	ENSGT00940000160504	ENSGT00940000167209	ENSGT00940000156761 #27	ENSGT00410000025596.a.b #26	ENSGT00390000002144 #25	ENSGT00940000164873	ENSGT00940000157833 #29	ENSGT00530000063698.b	ENSGT00940000158264.b	ENSGT00940000167907	ENSGT00940000156213 #30	ENSGT00940000156592 #31	ENSGT00940000157151 #32	ENSGT00940000159638 #33
Leishan spiny toad	MODERN SPECIES	5	PUM1 (ENSLLEG00000001911) #35	ENSLLEG00000001967	NKAIN1 (ENSLLEG00000001985) #36	SNRNP40 (ENSLLEG00000002037)	ENSLLEG00000002126	ENSLLEG00000002196	ENSLLEG00000002232	EDN2 (ENSLLEG00000002275)	ENSLLEG00000002296	ENSLLEG00000002309	FOXO6 (ENSLLEG00000002327)	ENSLLEG00000002339	ENSLLEG00000002344	SCMH1 (ENSLLEG00000002360)	CTPS1 (ENSLLEG00000002406)	RCC1 (ENSLLEG00000002483) #22	ENSLLEG00000002500	ENSLLEG00000002527	ENSLLEG00000002590	ENSLLEG00000002605	ENSLLEG00000002629	OPRD1 (ENSLLEG00000002642) #28	ENSLLEG00000002669	ENSLLEG00000002768	ENSLLEG00000002804	ENSLLEG00000002822	ID3 (ENSLLEG00000002864)	ENSLLEG00000002880	ENSLLEG00000002892	YTHDF2 (ENSLLEG00000002900) #27	GMEB1 (ENSLLEG00000002920) #26
Frog	MODERN SPECIES	2	dnajc8 (ENSXETG00000012902) #17	pum1 (ENSXETG00000012904) #35	nkain1 (ENSXETG00000012908) #36	snrnp40 (ENSXETG00000012910)	zcchc17 (ENSXETG00000012917)	fabp3 (ENSXETG00000012916)	ENSXETG00000037994	serinc2 (ENSXETG00000012918)	hivep3 (ENSXETG00000035857)	edn2 (ENSXETG00000041205)	ENSXETG00000042165	ENSXETG00000048943	FOXO6 (ENSXETG00000012944)	scmh1 (ENSXETG00000012966)	ctps1 (ENSXETG00000012949)	rcc1 (ENSXETG00000012969) #22	oprd1 (ENSXETG00000033842) #28	tcea3 (ENSXETG00000012975)	ENSXETG00000020617	taf12 (ENSXETG00000020616) #25	rab39a (ENSXETG00000020622)	gmeb1 (ENSXETG00000020625) #26	ythdf2 (ENSXETG00000020636) #27	gngt2.1 (ENSXETG00000030624)	msra.2 (ENSXETG00000020629)	id3 (ENSXETG00000020653)	sesn2 (ENSXETG00000020644) #21	fgr (ENSXETG00000020659) #7	ahdc1 (ENSXETG00000018716)	wasf2 (ENSXETG00000003647)	wdtc1 (ENSXETG00000020662)
Coelacanth	DUPLICATION
Coelacanth	MODERN SPECIES	306	MAP3K6 (ENSLACG00000015267)	ENSLACG00000015555	ENSLACG00000015622	ENSLACG00000015719	GPR3 (ENSLACG00000022227)	WASF2 (ENSLACG00000016132)	ENSLACG00000016242	AHDC1 (ENSLACG00000016403)	ENSLACG00000016880	FGR (ENSLACG00000016907) #7	FAM76A (ENSLACG00000017154) #8	zgc:110239 (ENSLACG00000017200)	SESN2 (ENSLACG00000017259) #19	MED18 (ENSLACG00000017315) #20	PHACTR4 (ENSLACG00000017437) #21	RCC1 (ENSLACG00000017540) #22	TRAM2 (ENSLACG00000017648)	EFHC1 (ENSLACG00000017717)	NCOA1 (ENSLACG00000017956)	PTRHD1 (ENSLACG00000018052)	CENPO (ENSLACG00000022674)
Coelacanth	MODERN SPECIES	2020													MTFR1L (ENSLACG00000000055)	ENSLACG00000001985	selenon (ENSLACG00000003304)	ENSLACG00000003772 #22	znf593 (ENSLACG00000004262)	RLF (ENSLACG00000004383)	ENSLACG00000022646	ZMPSTE24 (ENSLACG00000006600)	TMEM30B (ENSLACG00000007040)	KDM1A (ENSLACG00000007376)	LUZP1 (ENSLACG00000008313)