Rodentia ANCESTRAL SPECIES 6 ENSGT00390000011034 ENSGT00950000182836.b.b.b.b ENSGT01030000234985 ENSGT00880000138034 ENSGT00940000155208 ENSGT00940000160810 ENSGT00940000155089 #13 ENSGT00940000162065 #14 ENSGT00390000013943 #15 ENSGT01030000234639.A.a #16 ENSGT00940000153167.A.a #18 ENSGT00390000006394 #19 ENSGT00550000074878 #20 ENSGT01030000234626.B ENSGT00390000013931.a.b.b #21 ENSGT00390000011877 #22 ENSGT00530000063558.B #23 ENSGT00940000157993 #24 ENSGT00390000004172 #25 ENSGT01090000260082.d.b #26 ENSGT00940000160610 #27 ENSGT00940000154531 #28 ENSGT00390000007183 #29 ENSGT00940000155913 #30 ENSGT00390000004028 #31 ENSGT00390000003560 #32 ENSGT00940000160715 #33 ENSGT00940000156557 #34 ENSGT00940000156483 #35 ENSGT00390000008642 #36 ENSGT00940000163242 Rodentia_B ANCESTRAL SPECIES 18 ENSGT00390000011034 ENSGT00950000182836.b.b.b.b ENSGT01030000234985 ENSGT00880000138034 ENSGT00940000155208 ENSGT00940000160810 ENSGT00940000155089 #13 ENSGT00940000162065 #14 ENSGT00390000013943 #15 ENSGT01030000234639.A.a #16 ENSGT00940000153167.A.a #18 ENSGT00390000006394 #19 ENSGT00550000074878 #20 ENSGT01030000234626.B ENSGT00390000013931.a.b.b #21 ENSGT00390000011877 #22 ENSGT00530000063558.B #23 ENSGT00940000157993 #24 ENSGT00390000004172 #25 ENSGT01090000260082.d.b #26 ENSGT00940000160610 #27 ENSGT00940000154531 #28 ENSGT00390000007183 #29 ENSGT00940000155913 #30 ENSGT00390000004028 #31 ENSGT00390000003560 #32 ENSGT00940000160715 #33 ENSGT00940000156557 #34 ENSGT00940000156483 #35 ENSGT00390000008642 #36 ENSGT00940000163242 Myomorpha ANCESTRAL SPECIES 21 ENSGT00390000011034 ENSGT00950000182836.b.b.b.b ENSGT01030000234985 ENSGT00880000138034 ENSGT00940000155208 ENSGT00940000160810 ENSGT00940000155089 #13 ENSGT00940000162065 #14 ENSGT00390000013943 #15 ENSGT01030000234639.A.a #16 ENSGT00940000153167.A.a #18 ENSGT00390000006394 #19 ENSGT00550000074878 #20 ENSGT01030000234626.B ENSGT00390000013931.a.b.b #21 ENSGT00390000011877 #22 ENSGT00530000063558.B #23 ENSGT00940000157993 #24 ENSGT00390000004172 #25 ENSGT01090000260082.d.b #26 ENSGT00940000160610 #27 ENSGT00940000154531 #28 ENSGT00390000007183 #29 ENSGT00940000155913 #30 ENSGT00390000004028 #31 ENSGT00390000003560 #32 ENSGT00940000160715 #33 ENSGT00940000156557 #34 ENSGT00940000156483 #35 ENSGT00390000008642 #36 ENSGT00940000163242 Muroidea ANCESTRAL SPECIES 22 ENSGT00390000011034 ENSGT00950000182836.b.b.b.b ENSGT01030000234985 ENSGT00880000138034 ENSGT00940000155208 ENSGT00940000160810 ENSGT00940000155089 #13 ENSGT00940000162065 #14 ENSGT00390000013943 #15 ENSGT01030000234639.A.a #16 ENSGT00940000153167.A.a #18 ENSGT00390000006394 #19 ENSGT00550000074878 #20 ENSGT01030000234626.B ENSGT00390000013931.a.b.b #21 ENSGT00390000011877 #22 ENSGT00530000063558.B #23 ENSGT00940000157993 #24 ENSGT00390000004172 #25 ENSGT01090000260082.d.b #26 ENSGT00940000160610 #27 ENSGT00940000154531 #28 ENSGT00390000007183 #29 ENSGT00940000155913 #30 ENSGT00390000004028 #31 ENSGT00390000003560 #32 ENSGT00940000160715 #33 ENSGT00940000156557 #34 ENSGT00940000156483 #35 ENSGT00390000008642 #36 ENSGT00940000163242 Muroidea_A ANCESTRAL SPECIES 11 ENSGT00390000011034 ENSGT00950000182836.b.b.b.b ENSGT01030000234985 ENSGT00880000138034 ENSGT00940000155208 ENSGT00940000160810 ENSGT00940000155089 #13 ENSGT00940000162065 #14 ENSGT00390000013943 #15 ENSGT01030000234639.A.a #16 ENSGT00940000153167.A.a #18 ENSGT00390000006394 #19 ENSGT00550000074878 #20 ENSGT01030000234626.B ENSGT00390000013931.a.b.b #21 ENSGT00390000011877 #22 ENSGT00530000063558.B #23 ENSGT00940000157993 #24 ENSGT00390000004172 #25 ENSGT01090000260082.d.b #26 ENSGT00940000160610 #27 ENSGT00940000154531 #28 ENSGT00390000007183 #29 ENSGT00940000155913 #30 ENSGT00390000004028 #31 ENSGT00390000003560 #32 ENSGT00940000160715 #33 ENSGT00940000156557 #34 ENSGT00940000156483 #35 ENSGT00390000008642 #36 ENSGT00940000163242 Cricetidae ANCESTRAL SPECIES 11 ENSGT00390000011034 ENSGT00950000182836.b.b.b.b ENSGT00880000138034 ENSGT01030000234985 ENSGT00940000155208 ENSGT00940000160810 ENSGT00940000155089 #13 ENSGT00940000162065 #14 ENSGT00390000013943 #15 ENSGT01030000234639.A.a #16 ENSGT00940000153167.A.a #18 ENSGT00390000006394 #19 ENSGT00550000074878 #20 ENSGT01030000234626.B ENSGT00390000013931.a.b.b #21 ENSGT00390000011877 #22 ENSGT00530000063558.B #23 ENSGT00940000157993 #24 ENSGT00390000004172 #25 ENSGT01090000260082.d.b #26 ENSGT00940000160610 #27 ENSGT00940000154531 #28 ENSGT00390000007183 #29 ENSGT00940000155913 #30 ENSGT00390000004028 #31 ENSGT00390000003560 #32 ENSGT00940000160715 #33 ENSGT00940000156557 #34 ENSGT00940000156483 #35 ENSGT00390000008642 #36 ENSGT00940000155634 #37 Cricetinae ANCESTRAL SPECIES 7 ENSGT00390000011034 ENSGT00950000182836.b.b.b.b ENSGT00880000138034 ENSGT01030000234985 ENSGT00940000155208 ENSGT00940000160810 ENSGT00940000155089 #13 ENSGT00940000162065 #14 ENSGT00390000013943 #15 ENSGT01030000234639.A.a #16 ENSGT00940000153167.A.a #18 ENSGT00390000006394 #19 ENSGT00550000074878 #20 ENSGT01030000234626.B ENSGT00390000013931.a.b.b #21 ENSGT00390000011877 #22 ENSGT00530000063558.B #23 ENSGT00940000157993 #24 ENSGT00390000004172 #25 ENSGT01090000260082.d.b #26 ENSGT00940000160610 #27 ENSGT00940000154531 #28 ENSGT00390000007183 #29 ENSGT00940000155913 #30 ENSGT00390000004028 #31 ENSGT00390000003560 #32 ENSGT00940000160715 #33 ENSGT00940000156557 #34 ENSGT00940000156483 #35 ENSGT00390000008642 #36 ENSGT00940000155634 #37 Golden Hamster MODERN SPECIES 621 Slc22a2 (ENSMAUG00000011397) #13 Slc22a1 (ENSMAUG00000011380) #14 Igf2r (ENSMAUG00000007863) #15 Mas1 (ENSMAUG00000007870) #16 Mrgprh (ENSMAUG00000009630) #17 Pnldc1 (ENSMAUG00000012298) #18 Mrpl18 (ENSMAUG00000007294) #19 ENSMAUG00000013742 #20 Wtap (ENSMAUG00000020468) #21 Sod2 (ENSMAUG00000021246) #22 Fndc1 (ENSMAUG00000002546) #23 ENSMAUG00000019048 #24 ENSMAUG00000011046 #25 Ezr (ENSMAUG00000007375) #26 Sytl3 (ENSMAUG00000013851) #27 ENSMAUG00000021387 #28 ENSMAUG00000018890 #29 Tulp4 (ENSMAUG00000003623) #30 Gtf2h5 (ENSMAUG00000021477) #31 Serac1 (ENSMAUG00000004954) #32 Synj2 (ENSMAUG00000022212) #33 Snx9 (ENSMAUG00000010656) #34 Zdhhc14 (ENSMAUG00000018645) #35 Tmem242 (ENSMAUG00000006231) #36 Arid1b (ENSMAUG00000017697) #37 Chinese hamster chok1gshd MODERN SPECIES 1 Agpat4 (ENSCGRG00001024340) Map3k4 (ENSCGRG00001023770) Plg (ENSCGRG00001023181) ENSCGRG00001022809 Slc22a3 (ENSCGRG00001024404) Slc22a2 (ENSCGRG00001023859) #13 Slc22a1 (ENSCGRG00001023484) #14 Igf2r (ENSCGRG00001022921) #15 Mas1 (ENSCGRG00001007652) #16 ENSCGRG00001007470 #18 Mrpl18 (ENSCGRG00001010667) #19 TCP1 (ENSCGRG00001007629) #20 ENSCGRG00001024850 ENSCGRG00001024790 Wtap (ENSCGRG00001003444) #21 Sod2 (ENSCGRG00001001155) #22 Fndc1 (ENSCGRG00001004306) #23 ENSCGRG00001002978 #24 ENSCGRG00001023672 #25 Ezr (ENSCGRG00001022444) #26 Sytl3 (ENSCGRG00001021896) #27 ENSCGRG00001024351 #28 Tmem181a (ENSCGRG00001020931) #29 Tulp4 (ENSCGRG00001020408) #30 ENSCGRG00001013373 #31 Serac1 (ENSCGRG00001012521) #32 ENSCGRG00001008515 Synj2 (ENSCGRG00001004257) #33 Snx9 (ENSCGRG00001001484) #34 Zdhhc14 (ENSCGRG00001000563) #35 Tmem242 (ENSCGRG00001024838) #36 Cricetidae_B ANCESTRAL SPECIES 21 ENSGT00390000011034 ENSGT00950000182836.b.b.b.b ENSGT01030000234985 ENSGT00880000138034 ENSGT00940000155208 ENSGT00940000160810 ENSGT00940000155089 #13 ENSGT00940000162065 #14 ENSGT00390000013943 #15 ENSGT01030000234639.A.a #16 ENSGT00940000153167.A.a #18 ENSGT00390000006394 #19 ENSGT00550000074878 #20 ENSGT01030000234626.B ENSGT00390000013931.a.b.b #21 ENSGT00390000011877 #22 ENSGT00530000063558.B #23 ENSGT00940000157993 #24 ENSGT00390000004172 #25 ENSGT01090000260082.d.b #26 ENSGT00940000160610 #27 ENSGT00940000154531 #28 ENSGT00390000007183 #29 ENSGT00940000155913 #30 ENSGT00390000004028 #31 ENSGT00390000003560 #32 ENSGT00940000160715 #33 ENSGT00940000156557 #34 ENSGT00940000156483 #35 ENSGT00390000008642 #36 ENSGT00940000155634 #37 Prairie vole MODERN SPECIES 358 Agpat4 (ENSMOCG00000002544) Map3k4 (ENSMOCG00000015705) ENSMOCG00000016399 Plg (ENSMOCG00000021058) Slc22a3 (ENSMOCG00000009699) Slc22a2 (ENSMOCG00000000432) #13 Slc22a1 (ENSMOCG00000006138) #14 Igf2r (ENSMOCG00000016653) #15 Mas1 (ENSMOCG00000012154) #16 Pnldc1 (ENSMOCG00000014287) #18 Mrpl18 (ENSMOCG00000016680) #19 Tcp1 (ENSMOCG00000020265) #20 ENSMOCG00000000514 ENSMOCG00000016415 Wtap (ENSMOCG00000015976) #21 Sod2 (ENSMOCG00000021263) #22 Fndc1 (ENSMOCG00000009408) #23 ENSMOCG00000018649 #25 Ezr (ENSMOCG00000016414) #26 Sytl3 (ENSMOCG00000014797) #27 ENSMOCG00000011752 #28 ENSMOCG00000013123 #29 Tulp4 (ENSMOCG00000020984) #30 Gtf2h5 (ENSMOCG00000000992) #31 Serac1 (ENSMOCG00000006727) #32 Synj2 (ENSMOCG00000020054) #33 Snx9 (ENSMOCG00000021777) #34 Zdhhc14 (ENSMOCG00000010952) #35 Tmem242 (ENSMOCG00000011673) #36 Arid1b (ENSMOCG00000017619) #37 Nox3 (ENSMOCG00000002324) Northern American deer mouse MODERN SPECIES 7 Agpat4 (ENSPEMG00000000276) ENSPEMG00000007201 Map3k4 (ENSPEMG00000011456) Plg (ENSPEMG00000006099) Slc22a3 (ENSPEMG00000001370) Slc22a2 (ENSPEMG00000009409) #13 Slc22a1 (ENSPEMG00000013645) #14 Igf2r (ENSPEMG00000016189) #15 Mas1 (ENSPEMG00000014302) #16 Pnldc1 (ENSPEMG00000016301) #18 Mrpl18 (ENSPEMG00000016836) #19 Tcp1 (ENSPEMG00000012176) #20 ENSPEMG00000002107 ENSPEMG00000017398 Wtap (ENSPEMG00000013632) #21 Sod2 (ENSPEMG00000013472) #22 Fndc1 (ENSPEMG00000016047) #23 ENSPEMG00000010143 #24 ENSPEMG00000009961 #25 Ezr (ENSPEMG00000008621) #26 Sytl3 (ENSPEMG00000014143) #27 ENSPEMG00000018532 #28 Tmem181a (ENSPEMG00000000341) #29 Tulp4 (ENSPEMG00000018536) #30 Gtf2h5 (ENSPEMG00000031016) #31 Serac1 (ENSPEMG00000010226) #32 Synj2 (ENSPEMG00000006247) #33 Snx9 (ENSPEMG00000018518) #34 Zdhhc14 (ENSPEMG00000019121) #35 Tmem242 (ENSPEMG00000016796) #36 Arid1b (ENSPEMG00000008950) #37 Murinae ANCESTRAL SPECIES 29 ENSGT00950000182836.b.b.b.b ENSGT01030000234985 ENSGT00880000138034 ENSGT00940000155208 ENSGT00940000160810 ENSGT00940000155089 #13 ENSGT00940000162065 #14 ENSGT00390000013943 #15 ENSGT01030000234639.A.a #16 ENSGT00940000153167.A.a #18 ENSGT00390000006394 #19 ENSGT00550000074878 #20 ENSGT01030000234626.B ENSGT00390000013931.a.b.b #21 ENSGT00390000013931.a.a ##21 ENSGT00390000011877 #22 ENSGT00530000063558.B #23 ENSGT00940000157993 #24 ENSGT00390000004172 #25 ENSGT01090000260082.d.b #26 ENSGT00940000160610 #27 ENSGT00940000154531 #28 ENSGT00390000007183 #29 ENSGT00940000155913 #30 ENSGT00390000004028 #31 ENSGT00390000003560 #32 ENSGT00940000160715 #33 ENSGT00940000156557 #34 ENSGT00940000156483 #35 ENSGT00390000008642 #36 ENSGT00940000163242 Rat MODERN SPECIES Map3k4 (ENSRNOG00000017419) AABR07001512.1 (ENSRNOG00000017412) Plg (ENSRNOG00000017223) Slc22a3 (ENSRNOG00000022946) Slc22a2 (ENSRNOG00000016625) #13 Slc22a1 (ENSRNOG00000016337) #14 Igf2r (ENSRNOG00000014997) #15 Mas1 (ENSRNOG00000014971) #16 Pnldc1 (ENSRNOG00000023140) #18 Mrpl18 (ENSRNOG00000014582) #19 Tcp1 (ENSRNOG00000014160) #20 ENSRNOG00000069754 Acat2l1 (ENSRNOG00000013975) Acat2 (ENSRNOG00000019189) Wtap (ENSRNOG00000019091) #21 Sod2 (ENSRNOG00000019048) #22 Fndc1 (ENSRNOG00000030210) #23 Tagap (ENSRNOG00000018915) #24 Rsph3 (ENSRNOG00000018762) #25 Ezr (ENSRNOG00000018524) #26 Sytl3 (ENSRNOG00000018321) #27 Dynlt1 (ENSRNOG00000018207) #28 Tmem181 (ENSRNOG00000018158) #29 Tulp4 (ENSRNOG00000018012) #30 Gtf2h5 (ENSRNOG00000018007) #31 Serac1 (ENSRNOG00000017889) #32 Synj2 (ENSRNOG00000017114) #33 Snx9 (ENSRNOG00000046874) #34 Zdhhc14 (ENSRNOG00000029049) #35 Tmem242 (ENSRNOG00000016973) #36 Ldhal6b (ENSRNOG00000062741) Mus ANCESTRAL SPECIES 61 ENSGT00390000013931.a.b.b #21 ENSGT00390000011877 #22 Shrew mouse MODERN SPECIES 13 Agpat4 (MGP_PahariEiJ_G0023370) Map3k4 (MGP_PahariEiJ_G0023369) Plg (MGP_PahariEiJ_G0023368) Slc22a3 (MGP_PahariEiJ_G0023367) Slc22a2 (MGP_PahariEiJ_G0023366) #13 Slc22a1 (MGP_PahariEiJ_G0023365) #14 Igf2r (MGP_PahariEiJ_G0023364) #15 Mas1 (MGP_PahariEiJ_G0023363) #16 Mrgprh (MGP_PahariEiJ_G0023362) #16 Pnldc1 (MGP_PahariEiJ_G0023361) #18 Mrpl18 (MGP_PahariEiJ_G0023360) #19 Tcp1 (MGP_PahariEiJ_G0023359) #20 MGP_PahariEiJ_G0023358 MGP_PahariEiJ_G0023357 MGP_PahariEiJ_G0023356 ##21 Sod2 (MGP_PahariEiJ_G0023355) #22 Fndc1 (MGP_PahariEiJ_G0023354) #23 MGP_PahariEiJ_G0023353 #24 MGP_PahariEiJ_G0023352 #25 MGP_PahariEiJ_G0023351 #25 Ezr (MGP_PahariEiJ_G0023350) #26 Sytl3 (MGP_PahariEiJ_G0023349) #27 Tmem181a (MGP_PahariEiJ_G0023348) #29 Tulp4 (MGP_PahariEiJ_G0023347) #30 Gtf2h5 (MGP_PahariEiJ_G0023346) #31 Serac1 (MGP_PahariEiJ_G0023345) #32 Synj2 (MGP_PahariEiJ_G0023344) #33 Snx9 (MGP_PahariEiJ_G0023343) #34 Zdhhc14 (MGP_PahariEiJ_G0023342) #35 Ldhal6b (MGP_PahariEiJ_G0023341) Tmem242 (MGP_PahariEiJ_G0023340) #36 Mus_A ANCESTRAL SPECIES 58 ENSGT00390000013931.a.b.b #21 ENSGT00390000011877 #22 Ryukyu mouse MODERN SPECIES 8 Agpat4 (MGP_CAROLIEiJ_G0021054) Map3k4 (MGP_CAROLIEiJ_G0021053) Plg (MGP_CAROLIEiJ_G0021052) Slc22a3 (MGP_CAROLIEiJ_G0021051) Slc22a2 (MGP_CAROLIEiJ_G0021050) #13 Slc22a1 (MGP_CAROLIEiJ_G0021049) #14 MGP_CAROLIEiJ_G0021048 Mas1 (MGP_CAROLIEiJ_G0021047) #16 Mrgprh (MGP_CAROLIEiJ_G0021046) #16 Pnldc1 (MGP_CAROLIEiJ_G0021045) #18 Mrpl18 (MGP_CAROLIEiJ_G0021044) #19 Tcp1 (MGP_CAROLIEiJ_G0021043) #20 MGP_CAROLIEiJ_G0021042 MGP_CAROLIEiJ_G0021041 MGP_CAROLIEiJ_G0021040 ##21 Sod2 (MGP_CAROLIEiJ_G0021039) #22 Fndc1 (MGP_CAROLIEiJ_G0021038) #23 MGP_CAROLIEiJ_G0021037 #24 MGP_CAROLIEiJ_G0021036 #25 MGP_CAROLIEiJ_G0021035 #25 Ezr (MGP_CAROLIEiJ_G0021034) #26 Sytl3 (MGP_CAROLIEiJ_G0021033) #27 MGP_CAROLIEiJ_G0021032 #28 MGP_CAROLIEiJ_G0021031 #28 Tmem181a (MGP_CAROLIEiJ_G0021030) #29 Tulp4 (MGP_CAROLIEiJ_G0021029) #30 Gtf2h5 (MGP_CAROLIEiJ_G0021028) #31 Serac1 (MGP_CAROLIEiJ_G0021027) #32 Synj2 (MGP_CAROLIEiJ_G0021026) #33 Snx9 (MGP_CAROLIEiJ_G0021025) #34 Zdhhc14 (MGP_CAROLIEiJ_G0021024) #35 Mus_B ANCESTRAL SPECIES 9 ENSGT01030000234985 ENSGT00880000138034 ENSGT00940000155208 ENSGT00940000160810 ENSGT00940000155089 #13 ENSGT00940000162065.d #14 ENSGT00940000162065.c.a #14 ENSGT00390000013943 #15 ENSGT01030000234639.A.a #16 ENSGT00940000153167.A.a #18 ENSGT00390000006394 #19 ENSGT00550000074878 #20 ENSGT01030000234626.B.p ENSGT01030000234626.B.o ENSGT00390000013931.a.b.b #21 ENSGT00390000011877 #22 Mouse MODERN SPECIES 8 Agpat4 (ENSMUSG00000023827) Map3k4 (ENSMUSG00000014426) Plg (ENSMUSG00000059481) Slc22a3 (ENSMUSG00000023828) Slc22a2 (ENSMUSG00000040966) #13 Slc22a1 (ENSMUSG00000023829) #14 Igf2r (ENSMUSG00000023830) #15 Mas1 (ENSMUSG00000068037) #16 Mrgprh (ENSMUSG00000059408) #16 Pnldc1 (ENSMUSG00000073460) #18 Mrpl18 (ENSMUSG00000057388) #19 Tcp1 (ENSMUSG00000068039) #20 Acat3 (ENSMUSG00000062480) Acat2 (ENSMUSG00000023832) Wtap (ENSMUSG00000060475) #21 Sod2 (ENSMUSG00000006818) #22 Gpr31b (ENSMUSG00000071311) Tcp10b (ENSMUSG00000055602) Unc93a (ENSMUSG00000067049) Smok2a (ENSMUSG00000073458) Smok2b (ENSMUSG00000073457) Tcp10c (ENSMUSG00000052469) Afdn (ENSMUSG00000068036) Gm7168 (ENSMUSG00000067941) Gm7356 (ENSMUSG00000101307) Gm7358 (ENSMUSG00000101361) Dact2 (ENSMUSG00000048826) Smoc2 (ENSMUSG00000023886) Thbs2 (ENSMUSG00000023885) Wdr27 (ENSMUSG00000046991) 1600012H06Rik (ENSMUSG00000050088) Mus_C ANCESTRAL SPECIES 35 ENSGT00880000138034 ENSGT00940000155208 ENSGT00940000160810 ENSGT00940000155089 #13 ENSGT00940000162065.d #14 ENSGT00940000162065.c.a #14 ENSGT00390000013943 #15 ENSGT01030000234639.A.a #16 ENSGT00940000153167.A.a #18 ENSGT00390000006394 #19 ENSGT00550000074878 #20 ENSGT01030000234626.B.p ENSGT01030000234626.B.o ENSGT00390000013931.a.a ##21 ENSGT00390000013931.a.b.b #21 ENSGT00390000011877 #22 spretus MODERN SPECIES 8 Agpat4 (MGP_SPRETEiJ_G0021966) Map3k4 (MGP_SPRETEiJ_G0021967) Plg (MGP_SPRETEiJ_G0021968) Slc22a3 (MGP_SPRETEiJ_G0021969) Slc22a2 (MGP_SPRETEiJ_G0021970) #13 Slc22a1 (MGP_SPRETEiJ_G0021971) #14 Igf2r (MGP_SPRETEiJ_G0021972) #15 Mas1 (MGP_SPRETEiJ_G0021973) #16 Mrgprh (MGP_SPRETEiJ_G0021974) #16 Pnldc1 (MGP_SPRETEiJ_G0021975) #18 Mrpl18 (MGP_SPRETEiJ_G0021976) #19 Tcp1 (MGP_SPRETEiJ_G0021977) #20 Acat3 (MGP_SPRETEiJ_G0021978) MGP_SPRETEiJ_G0021979 MGP_SPRETEiJ_G0021980 ##21 Sod2 (MGP_SPRETEiJ_G0021981) #22 MGP_SPRETEiJ_G0021982 MGP_SPRETEiJ_G0021983 Afdn (MGP_SPRETEiJ_G0021984) Dact2 (MGP_SPRETEiJ_G0021985) Smoc2 (MGP_SPRETEiJ_G0021986) Thbs2 (MGP_SPRETEiJ_G0021987) Wdr27 (MGP_SPRETEiJ_G0021988) 1600012H06Rik (MGP_SPRETEiJ_G0021989) Phf10 (MGP_SPRETEiJ_G0021990) MGP_SPRETEiJ_G0021991 MGP_SPRETEiJ_G0021992 MGP_SPRETEiJ_G0021993 Dll1 (MGP_SPRETEiJ_G0021994) Fam120b (MGP_SPRETEiJ_G0021995) Psmb1 (MGP_SPRETEiJ_G0021996) Steppe mouse DUPLICATION Steppe mouse MODERN SPECIES 1695 ENSMSIG00000017799 Wtap (ENSMSIG00000017807) #21 ENSMSIG00000017836 #22 Steppe mouse MODERN SPECIES 57 Srfbp1 (ENSMSIG00000026058) Lox (ENSMSIG00000026066) ENSMSIG00000026098 Gykl1 (ENSMSIG00000026133) Sncaip (ENSMSIG00000026142) ENSMSIG00000026374 Snx2 (ENSMSIG00000026381) Snx24 (ENSMSIG00000026431) Ppic (ENSMSIG00000026437) Prdm6 (ENSMSIG00000026448) Cep120 (ENSMSIG00000026475) ENSMSIG00000026498 ENSMSIG00000026505 Zfp608 (ENSMSIG00000026522) ENSMSIG00000026568 ENSMSIG00000026575 #22 Gramd3 (ENSMSIG00000026583) ENSMSIG00000026608 Phax (ENSMSIG00000026745) Upper Galilee mountains blind mole rat MODERN SPECIES 863 Slc22a1 (ENSNGAG00000022062) #14 Igf2r (ENSNGAG00000015486) #15 Mas1 (ENSNGAG00000011460) #16 Pnldc1 (ENSNGAG00000017714) #18 Mrpl18 (ENSNGAG00000020549) #19 Tcp1 (ENSNGAG00000008831) #20 ENSNGAG00000012479 ENSNGAG00000007657 Wtap (ENSNGAG00000015946) #21 ENSNGAG00000015643 Sod2 (ENSNGAG00000012434) #22 Lesser Egyptian jerboa MODERN SPECIES 44 ENSJJAG00000022340 Prkn (ENSJJAG00000011282) Agpat4 (ENSJJAG00000024380) ENSJJAG00000017984 ENSJJAG00000016960 Plg (ENSJJAG00000023805) Slc22a3 (ENSJJAG00000015842) Slc22a2 (ENSJJAG00000020676) #13 Slc22a1 (ENSJJAG00000017119) #14 Igf2r (ENSJJAG00000019554) #15 Mas1 (ENSJJAG00000011567) #16 Pnldc1 (ENSJJAG00000009937) #18 ENSJJAG00000019850 #20 ENSJJAG00000022555 Wtap (ENSJJAG00000017886) #21 Sod2 (ENSJJAG00000018002) #22 Fndc1 (ENSJJAG00000019101) #23 ENSJJAG00000002202 #24 ENSJJAG00000008005 #25 Ezr (ENSJJAG00000018957) #26 Sytl3 (ENSJJAG00000000977) #27 ENSJJAG00000021394 #28 ENSJJAG00000016901 #29 Tulp4 (ENSJJAG00000015161) #30 ENSJJAG00000007576 ENSJJAG00000018115 Gtf2h5 (ENSJJAG00000014212) #31 Serac1 (ENSJJAG00000008471) #32 Synj2 (ENSJJAG00000014436) #33 Snx9 (ENSJJAG00000022587) #34 Zdhhc14 (ENSJJAG00000010246) #35 Kangaroo rat MODERN SPECIES 396 Qki (ENSDORG00000008151) ENSDORG00000026934 ENSDORG00000027142 Agpat4 (ENSDORG00000015627) ENSDORG00000025664 Plg (ENSDORG00000024248) Slc22a3 (ENSDORG00000008402) Slc22a2 (ENSDORG00000008400) #13 Slc22a1 (ENSDORG00000011523) #14 Igf2r (ENSDORG00000009527) #15 Mas1 (ENSDORG00000003320) #16 Pnldc1 (ENSDORG00000011517) #18 ENSDORG00000011510 #20 ENSDORG00000011505 ENSDORG00000026059 #21 Sod2 (ENSDORG00000001358) #22 Ezr (ENSDORG00000015424) #26 ENSDORG00000014053 #28 ENSDORG00000014045 #29 Tulp4 (ENSDORG00000024333) #30 ENSDORG00000005088 #31 Serac1 (ENSDORG00000014130) #32 Synj2 (ENSDORG00000014128) #33 Snx9 (ENSDORG00000007327) #34 ENSDORG00000008869 Rodentia_A ANCESTRAL SPECIES 8 ENSGT00390000011034 ENSGT00950000182836.b.b.b.b ENSGT01030000234985 ENSGT00880000138034 ENSGT00940000155208 ENSGT00940000160810 ENSGT00940000155089 #13 ENSGT00940000162065 #14 ENSGT00390000013943 #15 ENSGT01030000234639.A.a #16 ENSGT00940000153167.A.a #18 ENSGT00390000006394 #19 ENSGT00550000074878 #20 ENSGT01030000234626.B ENSGT00390000013931.a.b.b #21 ENSGT00390000011877 #22 ENSGT00530000063558.B #23 ENSGT00940000157993 #24 ENSGT00390000004172 #25 ENSGT01090000260082.d.b #26 ENSGT00940000160610 #27 ENSGT00940000154531 #28 ENSGT00390000007183 #29 ENSGT00940000155913 #30 ENSGT00390000004028 #31 ENSGT00390000003560 #32 ENSGT00940000160715 #33 ENSGT00940000156557 #34 ENSGT00940000156483 #35 ENSGT00390000008642 #36 ENSGT00940000163242 Hystricomorpha ANCESTRAL SPECIES 53 ENSGT00390000011034 ENSGT00950000182836.b.b.b.b ENSGT00880000138034 ENSGT00940000155208 ENSGT00940000160810 ENSGT00940000155089 #13 ENSGT00940000162065 #14 ENSGT00390000013943 #15 ENSGT01030000234639.A.a #16 ENSGT00940000153167.A.a #18 ENSGT00390000006394 #19 ENSGT00550000074878 #20 ENSGT00940000161879 ENSGT01030000234626.B ENSGT00390000013931.a.b.b #21 ENSGT00390000011877 #22 Naked mole-rat female MODERN SPECIES ENSHGLG00000014427 SLC22A1 (ENSHGLG00000017500) #14 Igf2r (ENSHGLG00000003728) #15 ENSHGLG00000039226 MAS1 (ENSHGLG00000019988) #16 ENSHGLG00000035250 PNLDC1 (ENSHGLG00000006889) #18 ENSHGLG00000007214 #19 TCP1 (ENSHGLG00000007866) #20 ENSHGLG00000003723 ENSHGLG00000004341 ENSHGLG00000034564 #20 ACAT2 (ENSHGLG00000006902) ENSHGLG00000033037 WTAP (ENSHGLG00000007879) #21 ENSHGLG00000016518 #22 ENSHGLG00000048454 ENSHGLG00000007131 ENSHGLG00000043320 GSTA3 (ENSHGLG00000041079) ENSHGLG00000035426 ENSHGLG00000047464 ENSHGLG00000009261 EFHC1 (ENSHGLG00000009785) PAQR8 (ENSHGLG00000010601) MCM3 (ENSHGLG00000016531) IL17F (ENSHGLG00000017633) IL17A (ENSHGLG00000014659) ENSHGLG00000021226 PKHD1 (ENSHGLG00000018109) ENSHGLG00000005244 Hystricomorpha_a ANCESTRAL SPECIES 30 ENSGT00390000011034 ENSGT00950000182836.b.b.b.b ENSGT00880000138034 ENSGT00940000155208 ENSGT00940000160810 ENSGT00940000155089 #13 ENSGT00940000162065 #14 ENSGT00390000013943 #15 ENSGT01030000234639.A.a #16 ENSGT00940000153167.A.a #18 ENSGT00390000006394 #19 ENSGT00550000074878 #20 ENSGT00940000161879 ENSGT01030000234626.B ENSGT00390000013931.a.b.b #21 ENSGT00390000011877 #22 Guinea pig MODERN SPECIES 60 QKI (ENSCPOG00000003424) PACRG (ENSCPOG00000013410) PRKN (ENSCPOG00000006136) AGPAT4 (ENSCPOG00000006135) MAP3K4 (ENSCPOG00000013392) ENSCPOG00000011605 SLC22A3 (ENSCPOG00000010127) SLC22A2 (ENSCPOG00000001527) #13 IGF2R (ENSCPOG00000013207) #15 MAS1 (ENSCPOG00000000027) #16 PNLDC1 (ENSCPOG00000019565) #18 MRPL18 (ENSCPOG00000040103) #19 TCP1 (ENSCPOG00000001676) #20 ACAT2 (ENSCPOG00000001672) WTAP (ENSCPOG00000001669) #21 SOD2 (ENSCPOG00000036439) #22 ENSCPOG00000040324 Hystricomorpha_b ANCESTRAL SPECIES 29 ENSGT00390000011034 ENSGT00950000182836.b.b.b.b ENSGT00880000138034 ENSGT00940000155208 ENSGT00940000160810 ENSGT00940000155089 #13 ENSGT00940000162065 #14 ENSGT00390000013943 #15 ENSGT01030000234639.A.a #16 ENSGT00940000153167.A.a #18 ENSGT00390000006394 #19 ENSGT00550000074878 #20 ENSGT00940000161879 ENSGT01030000234626.B ENSGT00390000013931.a.b.b #21 ENSGT00390000011877 #22 Degu MODERN SPECIES 153 SLC22A2 (ENSODEG00000007315) #13 SLC22A1 (ENSODEG00000007862) #14 ENSODEG00000019312 IGF2R (ENSODEG00000007106) #15 ENSODEG00000019599 MAS1 (ENSODEG00000019418) #16 ENSODEG00000019381 PNLDC1 (ENSODEG00000008047) #18 ENSODEG00000019385 ENSODEG00000007318 #19 ENSODEG00000007990 #20 ENSODEG00000008372 #20 ACAT2 (ENSODEG00000008431) ENSODEG00000008023 ##21 ENSODEG00000019351 SOD2 (ENSODEG00000007052) #22 ENSODEG00000019438 METRNL (ENSODEG00000008002) B3GNTL1 (ENSODEG00000011917) TBCD (ENSODEG00000009094) ZNF750 (ENSODEG00000008866) ENSODEG00000019653 ENSODEG00000009328 FN3KRP (ENSODEG00000012467) ENSODEG00000020021 RAB40B (ENSODEG00000007441) WDR45B (ENSODEG00000007809) FOXK2 (ENSODEG00000008321) NARF (ENSODEG00000007704) CYBC1 (ENSODEG00000008201) HEXD (ENSODEG00000009299) Long-tailed chinchilla MODERN SPECIES 146 PRKN (ENSCLAG00000008284) AGPAT4 (ENSCLAG00000008421) MAP3K4 (ENSCLAG00000008769) ENSCLAG00000002399 SLC22A3 (ENSCLAG00000002492) SLC22A2 (ENSCLAG00000002562) #13 SLC22A1 (ENSCLAG00000002646) #14 IGF2R (ENSCLAG00000002642) #15 MAS1 (ENSCLAG00000017515) #16 PNLDC1 (ENSCLAG00000003228) #18 MRPL18 (ENSCLAG00000012045) #19 ENSCLAG00000012133 ENSCLAG00000009354 #20 ACAT2 (ENSCLAG00000009441) WTAP (ENSCLAG00000009722) #21 SOD2 (ENSCLAG00000010198) #22 Sciuridae ANCESTRAL SPECIES 1 ENSGT00390000011034 ENSGT00950000182836.b.b.b.b ENSGT01030000234985 ENSGT00880000138034 ENSGT00940000155208 ENSGT00940000160810 ENSGT00940000155089 #13 ENSGT00940000162065 #14 ENSGT00390000013943 #15 ENSGT01030000234639.A.a #16 ENSGT00940000153167.A.a #18 ENSGT00390000006394 #19 ENSGT00550000074878 #20 ENSGT01030000234626.B ENSGT00390000013931.a.b.b #21 ENSGT00390000011877 #22 ENSGT00530000063558.B #23 ENSGT00940000157993 #24 ENSGT00390000004172 #25 ENSGT01090000260082.d.b #26 ENSGT00940000160610 #27 ENSGT00940000154531 #28 ENSGT00390000007183 #29 ENSGT00940000155913 #30 ENSGT00390000004028 #31 ENSGT00390000003560 #32 ENSGT00940000160715 #33 ENSGT00940000156557 #34 ENSGT00940000156483 #35 ENSGT00390000008642 #36 ENSGT00940000155634 #37 Marmotini ANCESTRAL SPECIES 11 ENSGT00390000015545.v ENSGT00950000182836.b.b.b.b ENSGT01030000234985 ENSGT00880000138034 ENSGT00940000155208 ENSGT00940000160810 ENSGT00940000155089 #13 ENSGT00940000162065 #14 ENSGT00390000013943 #15 ENSGT01030000234639.A.a #16 ENSGT00940000153167.A.a #18 ENSGT00390000006394 #19 ENSGT00550000074878 #20 ENSGT01030000234626.B ENSGT00390000013931.a.b.b #21 ENSGT00390000011877 #22 ENSGT00530000063558.B #23 ENSGT00940000157993 #24 ENSGT00390000004172 #25 ENSGT01090000260082.d.b #26 ENSGT00940000160610 #27 ENSGT00940000154531.`b #28 ENSGT00390000007183 #29 ENSGT00940000155913 #30 ENSGT00390000004028 #31 ENSGT00390000003560 #32 ENSGT00940000160715 #33 ENSGT00940000156557 #34 ENSGT00940000156483 #35 ENSGT00390000008642 #36 ENSGT00940000155634 #37 Marmotini_b ANCESTRAL SPECIES 56 ENSGT00390000015545.v ENSGT00950000182836.b.b.b.b ENSGT01030000234985 ENSGT00880000138034 ENSGT00940000155208 ENSGT00940000160810 ENSGT00940000155089 #13 ENSGT00940000162065 #14 ENSGT00390000013943 #15 ENSGT01030000234639.A.a #16 ENSGT00940000153167.A.a #18 ENSGT00390000006394 #19 ENSGT00550000074878 #20 ENSGT01030000234626.B ENSGT00390000013931.a.b.b #21 ENSGT00390000011877 #22 ENSGT00530000063558.B #23 ENSGT00940000157993 #24 ENSGT00390000004172 #25 ENSGT01090000260082.d.b #26 ENSGT00940000160610 #27 ENSGT00940000154531.`b #28 ENSGT00390000007183 #29 ENSGT00940000155913 #30 ENSGT00390000004028 #31 ENSGT00390000003560 #32 ENSGT00940000160715 #33 ENSGT00940000156557 #34 ENSGT00940000156483 #35 ENSGT00390000008642 #36 ENSGT00940000155634 #37 Squirrel MODERN SPECIES 89 PRKN (ENSSTOG00000021965) AGPAT4 (ENSSTOG00000002544) MAP3K4 (ENSSTOG00000002821) ENSSTOG00000020315 SLC22A3 (ENSSTOG00000007036) SLC22A2 (ENSSTOG00000010147) #13 SLC22A1 (ENSSTOG00000009024) #14 IGF2R (ENSSTOG00000008960) #15 MAS1 (ENSSTOG00000029761) #16 ENSSTOG00000026373 #16 PNLDC1 (ENSSTOG00000005595) #18 MRPL18 (ENSSTOG00000005583) #19 ENSSTOG00000005572 #20 ACAT2 (ENSSTOG00000005564) WTAP (ENSSTOG00000026157) #21 SOD2 (ENSSTOG00000008738) #22 ENSSTOG00000033536 FNDC1 (ENSSTOG00000007105) #23 TAGAP (ENSSTOG00000021563) #24 RSPH3 (ENSSTOG00000021240) #25 EZR (ENSSTOG00000006325) #26 SYTL3 (ENSSTOG00000006284) #27 ENSSTOG00000006273 #28 TMEM181 (ENSSTOG00000006218) #29 TULP4 (ENSSTOG00000006169) #30 GTF2H5 (ENSSTOG00000003476) #31 SERAC1 (ENSSTOG00000016478) #32 SYNJ2 (ENSSTOG00000016474) #33 SNX9 (ENSSTOG00000010620) #34 ZDHHC14 (ENSSTOG00000024545) #35 TMEM242 (ENSSTOG00000021519) #36 Arctic ground squirrel MODERN SPECIES 968 ENSUPAG00010003032 ##21 SOD2 (ENSUPAG00010003043) #22 ENSUPAG00010003053 Alpin marmot MODERN SPECIES 55 ENSMMMG00000009285 AGPAT4 (ENSMMMG00000009306) MAP3K4 (ENSMMMG00000009318) ENSMMMG00000009428 SLC22A3 (ENSMMMG00000009457) SLC22A2 (ENSMMMG00000009474) #13 SLC22A1 (ENSMMMG00000009498) #14 IGF2R (ENSMMMG00000009520) #15 MAS1 (ENSMMMG00000009593) #16 ENSMMMG00000009610 #16 PNLDC1 (ENSMMMG00000009617) #18 MRPL18 (ENSMMMG00000009635) #19 TCP1 (ENSMMMG00000009649) #20 ACAT2 (ENSMMMG00000009712) WTAP (ENSMMMG00000009724) #21 SOD2 (ENSMMMG00000009744) #22 ENSMMMG00000009777 TAGAP (ENSMMMG00000009875) #24 RSPH3 (ENSMMMG00000009878) #25 EZR (ENSMMMG00000009906) #26 SYTL3 (ENSMMMG00000009912) #27 ENSMMMG00000009958 #28 TMEM181 (ENSMMMG00000009973) #29 TULP4 (ENSMMMG00000010029) #30 ENSMMMG00000010057 GTF2H5 (ENSMMMG00000010071) #31 SERAC1 (ENSMMMG00000010093) #32 SYNJ2 (ENSMMMG00000010186) #33 SNX9 (ENSMMMG00000012106) #34 ZDHHC14 (ENSMMMG00000012169) #35 TMEM242 (ENSMMMG00000012183) #36 Eurasian red squirrel DUPLICATION Eurasian red squirrel MODERN SPECIES 16 ENSSVLG00005013042 ENSSVLG00005013165 ENSSVLG00005013240 SLC22A3 (ENSSVLG00005013302) SLC22A2 (ENSSVLG00005013453) #13 SLC22A1 (ENSSVLG00005013724) #14 IGF2R (ENSSVLG00005013999) #15 ENSSVLG00005014490 MAS1 (ENSSVLG00005014545) #16 ENSSVLG00005014568 #18 MRPL18 (ENSSVLG00005014946) #19 ENSSVLG00005015024 ENSSVLG00005015119 #20 ACAT2 (ENSSVLG00005015487) ENSSVLG00005015534 #21 ENSSVLG00005015666 #22 ENSSVLG00005015820 FNDC1 (ENSSVLG00005015913) #23 TAGAP (ENSSVLG00005016286) #24 RSPH3 (ENSSVLG00005016457) #25 EZR (ENSSVLG00005016672) #26 SYTL3 (ENSSVLG00005016826) #27 ENSSVLG00005017151 DYNLT1 (ENSSVLG00005017209) #28 TMEM181 (ENSSVLG00005017253) #29 TULP4 (ENSSVLG00005017496) #30 GTF2H5 (ENSSVLG00005017847) #31 ENSSVLG00005017883 SERAC1 (ENSSVLG00005017957) #32 SYNJ2 (ENSSVLG00005018380) #33 SNX9 (ENSSVLG00005018666) #34 Eurasian red squirrel MODERN SPECIES 1 EPHB1 (ENSSVLG00005005333) PPP2R3A (ENSSVLG00005005491) MSL2 (ENSSVLG00005005641) PCCB (ENSSVLG00005005737) ENSSVLG00005005910 ENSSVLG00005005987 SLC35G2 (ENSSVLG00005006019) NCK1 (ENSSVLG00005006047) ENSSVLG00005006099 ENSSVLG00005006126 SOX14 (ENSSVLG00005006149) CLDN18 (ENSSVLG00005006186) ENSSVLG00005006263 DZIP1L (ENSSVLG00005006316) A4GNT (ENSSVLG00005006341) ENSSVLG00005006364 #22 DBR1 (ENSSVLG00005006413) ARMC8 (ENSSVLG00005006598) NME9 (ENSSVLG00005007212) MRAS (ENSSVLG00005007241) ESYT3 (ENSSVLG00005007298) ENSSVLG00005007419 FAIM (ENSSVLG00005007710) ENSSVLG00005007777 FOXL2 (ENSSVLG00005007808) ENSSVLG00005007908 ENSSVLG00005007923 MRPS22 (ENSSVLG00005007938) COPB2 (ENSSVLG00005008031) RBP2 (ENSSVLG00005008067) RBP1 (ENSSVLG00005008104)