Chordata	ANCESTRAL SPECIES																	ENSGT00940000155481 #22
Vertebrata	ANCESTRAL SPECIES																	ENSGT00940000155481 #22
Gnathostomata	ANCESTRAL SPECIES	136																ENSGT00940000155481 #22	ENSGT00940000160511 #23	ENSGT01030000234579.A.b #24	ENSGT00940000157909 #26	ENSGT01000000214434.A #27	ENSGT00670000098080 #28	ENSGT00940000155714 #29	ENSGT00950000183097.a.b #30	ENSGT01060000248594.f #31	ENSGT00940000157649 #32	ENSGT00390000010687.a.a #34	ENSGT00940000161292 #35	ENSGT00940000160094 #37	ENSGT00520000055625.b	ENSGT01030000234558.A.a.b	ENSGT00940000154435
Euteleostomi	ANCESTRAL SPECIES	7	ENSGT00950000185427	ENSGT00950000183022.a.a.a	ENSGT00940000162537	ENSGT00940000153313.A	ENSGT00510000048154	ENSGT00940000158872	ENSGT00940000156517	ENSGT00390000001015	ENSGT00940000160895	ENSGT00510000050180	ENSGT00940000161449 #20	ENSGT00940000158201 #21	ENSGT00940000160889	ENSGT00940000154035.a	ENSGT00530000068221	ENSGT00940000155481 #22	ENSGT00940000160511 #23	ENSGT01030000234579.A.b #24	ENSGT00940000157909 #26	ENSGT01000000214434.A #27	ENSGT00670000098080 #28	ENSGT00940000155714 #29	ENSGT00950000183097.a.b #30	ENSGT01060000248594.f #31	ENSGT00940000157649 #32	ENSGT00390000010687.a.a #34	ENSGT00940000161292 #35	ENSGT00940000160094 #37	ENSGT00520000055625.b	ENSGT01030000234558.A.a.b	ENSGT00940000154435
Sarcopterygii	ANCESTRAL SPECIES	5	ENSGT00950000185427	ENSGT00950000183022.a.a.a	ENSGT00940000162537	ENSGT00940000153313.A	ENSGT00510000048154	ENSGT00940000158872	ENSGT00940000156517	ENSGT00390000001015	ENSGT00940000160895	ENSGT00510000050180	ENSGT00940000161449 #20	ENSGT00940000158201 #21	ENSGT00940000154035.a	ENSGT00940000165258	ENSGT00530000068221	ENSGT00940000155481 #22	ENSGT00940000160511 #23	ENSGT01030000234579.A.b #24	ENSGT00940000157909 #26	ENSGT01000000214434.A #27	ENSGT00670000098080 #28	ENSGT00940000155714 #29	ENSGT00950000183097.a.b #30	ENSGT01060000248594.f #31	ENSGT00940000157649 #32	ENSGT00390000010687.a.a #34	ENSGT00940000161292 #35	ENSGT00940000160094 #37	ENSGT00520000055625.b	ENSGT01030000234558.A.a.b	ENSGT00940000154435
Tetrapoda	ANCESTRAL SPECIES	12	ENSGT00950000185427	ENSGT00950000183022.a.a.a	ENSGT00940000162537	ENSGT00940000153313.A	ENSGT00510000048154	ENSGT00940000158872	ENSGT00940000156517	ENSGT00390000001015	ENSGT00940000160895	ENSGT00510000050180	ENSGT00940000161449 #20	ENSGT00940000158201 #21	ENSGT00940000154035.a	ENSGT00940000165258	ENSGT00530000068221	ENSGT00940000155481 #22	ENSGT00940000160511 #23	ENSGT01030000234579.A.b #24	ENSGT00940000157909 #26	ENSGT01000000214434.A #27	ENSGT00670000098080 #28	ENSGT00940000155714 #29	ENSGT00950000183097.a.b #30	ENSGT01060000248594.f #31	ENSGT00940000157649 #32	ENSGT00390000010687.a.a #34	ENSGT00940000161292 #35	ENSGT00940000160094 #37	ENSGT00520000055625.b	ENSGT01030000234558.A.a.b	ENSGT00940000154435
Amniota	ANCESTRAL SPECIES	13	ENSGT00390000009776	ENSGT00390000016956	ENSGT00940000155511	ENSGT00950000185427	ENSGT00950000183022.a.a.a	ENSGT01100000263557.B	ENSGT00940000162537	ENSGT00940000153313.A	ENSGT00510000048154	ENSGT00940000158872	ENSGT00940000156517	ENSGT00390000001015	ENSGT00940000160895	ENSGT00940000161449 #20	ENSGT00940000158201 #21	ENSGT00940000155481 #22	ENSGT00940000160511 #23	ENSGT01030000234579.A.b #24	ENSGT00910000147942	ENSGT00940000157909 #26	ENSGT01000000214434.A #27	ENSGT00670000098080 #28	ENSGT00940000155714 #29	ENSGT00950000183097.a.b #30	ENSGT01060000248594.f #31	ENSGT00940000157649 #32	ENSGT00940000162334 #33	ENSGT00390000010687.a.a #34	ENSGT00940000161292 #35	ENSGT00940000160094 #37	ENSGT00520000055625.b
Mammalia	ANCESTRAL SPECIES	7	ENSGT00940000161675	ENSGT00390000009776	ENSGT01030000234590.A.a.b	ENSGT00940000155511	ENSGT00950000183022.a.a.a	ENSGT01100000263557.B	ENSGT00940000162537	ENSGT00940000153313.A	ENSGT00510000048154	ENSGT00940000158872	ENSGT00940000156517	ENSGT00390000001015	ENSGT00940000160895	ENSGT00940000161449 #20	ENSGT00940000158201 #21	ENSGT00940000155481 #22	ENSGT00940000160511 #23	ENSGT01030000234579.A.b #24	ENSGT00910000147942	ENSGT00940000157909 #26	ENSGT01000000214434.A #27	ENSGT00670000098080 #28	ENSGT00940000155714 #29	ENSGT00950000183097.a.b #30	ENSGT01060000248594.f #31	ENSGT00940000157649 #32	ENSGT00940000162334 #33	ENSGT00390000010687.a.a #34	ENSGT00940000161292 #35	ENSGT00940000160094 #37	ENSGT00520000055625.b
Theria	ANCESTRAL SPECIES	5	ENSGT00940000161675	ENSGT00390000009776	ENSGT01030000234590.A.a.b	ENSGT00940000155511	ENSGT00950000183022.a.a.a	ENSGT01100000263557.B	ENSGT00940000162537	ENSGT00940000153313.A	ENSGT00510000048154	ENSGT00940000158872	ENSGT00940000156517	ENSGT00390000001015	ENSGT00940000160895	ENSGT00940000161449 #20	ENSGT00940000158201 #21	ENSGT00940000155481 #22	ENSGT00940000160511 #23	ENSGT01030000234579.A.b #24	ENSGT00910000147942	ENSGT00940000157909 #26	ENSGT01000000214434.A #27	ENSGT00670000098080 #28	ENSGT00940000155714 #29	ENSGT00950000183097.a.b #30	ENSGT01060000248594.f #31	ENSGT00940000157649 #32	ENSGT00940000162334 #33	ENSGT00390000010687.a.a #34	ENSGT00940000161292 #35	ENSGT00940000160094 #37	ENSGT00520000055625.b
Eutheria	ANCESTRAL SPECIES	5	ENSGT00940000157522	ENSGT00940000162075	ENSGT00390000007772	ENSGT00390000006095	ENSGT00900000141083.d	ENSGT00940000160165	ENSGT00940000159675 #13	ENSGT00950000183179.b.b #14	ENSGT00950000183086.a.a.b #15	ENSGT00530000064220 #16	ENSGT00940000154369 #17	ENSGT01030000234629.C #18	ENSGT00390000016324 #19	ENSGT00940000161449 #20	ENSGT00940000158201 #21	ENSGT00940000155481 #22	ENSGT00940000160511 #23	ENSGT01030000234579.A.b #24	ENSGT00910000147942	ENSGT00940000157909 #26	ENSGT01000000214434.A #27	ENSGT00670000098080 #28	ENSGT00940000155714 #29	ENSGT00950000183097.a.b #30	ENSGT01060000248594.f #31	ENSGT00940000157649 #32	ENSGT00940000162334 #33	ENSGT00390000010687.a.a #34	ENSGT00940000161292 #35	ENSGT00940000160094 #37	ENSGT00520000055625.b
Boreoeutheria	ANCESTRAL SPECIES	2	ENSGT00940000157522	ENSGT00940000162075	ENSGT00390000007772	ENSGT00390000006095	ENSGT00900000141083.d	ENSGT00940000160165	ENSGT00940000159675 #13	ENSGT00950000183179.b.b #14	ENSGT00950000183086.a.a.b #15	ENSGT00530000064220 #16	ENSGT00940000154369.d #17	ENSGT01030000234629.C #18	ENSGT00390000016324 #19	ENSGT00940000161449 #20	ENSGT00940000158201 #21	ENSGT00940000155481 #22	ENSGT00940000160511 #23	ENSGT01030000234579.A.b #24	ENSGT00910000147942	ENSGT00940000157909 #26	ENSGT01000000214434.A #27	ENSGT00670000098080 #28	ENSGT00940000155714 #29	ENSGT00950000183097.a.b #30	ENSGT01060000248594.f #31	ENSGT00940000157649 #32	ENSGT00940000162334 #33	ENSGT00390000010687.a.a #34	ENSGT00940000161292 #35	ENSGT00940000160094 #37	ENSGT00520000055625.b
Euarchontoglires	ANCESTRAL SPECIES	2	ENSGT00940000157522	ENSGT00940000162075	ENSGT00390000007772	ENSGT00390000006095	ENSGT00900000141083.d	ENSGT00940000160165	ENSGT00940000159675 #13	ENSGT00950000183179.b.b #14	ENSGT00950000183086.a.a.b #15	ENSGT00530000064220 #16	ENSGT00940000154369.d #17	ENSGT01030000234629.C #18	ENSGT00390000016324 #19	ENSGT00940000161449 #20	ENSGT00940000158201 #21	ENSGT00940000155481 #22	ENSGT00940000160511 #23	ENSGT01030000234579.A.b #24	ENSGT00940000157909 #26	ENSGT01000000214434.A #27	ENSGT00670000098080 #28	ENSGT00940000155714 #29	ENSGT00950000183097.a.b #30	ENSGT01060000248594.f #31	ENSGT00940000157649 #32	ENSGT00940000162334 #33	ENSGT00390000010687.a.a #34	ENSGT00940000161292 #35	ENSGT00940000160094 #37	ENSGT00520000055625.b	ENSGT01030000234558.A.a.b
Primates	ANCESTRAL SPECIES	1	ENSGT00940000157522	ENSGT00940000162075	ENSGT00390000007772.a	ENSGT00390000006095	ENSGT00900000141083.d	ENSGT00940000160165	ENSGT00940000159675 #13	ENSGT00950000183179.b.b #14	ENSGT00950000183086.a.a.b #15	ENSGT00530000064220 #16	ENSGT00940000154369.d #17	ENSGT01030000234629.C #18	ENSGT00390000016324 #19	ENSGT00940000161449 #20	ENSGT00940000158201 #21	ENSGT00940000155481 #22	ENSGT00940000160511 #23	ENSGT01030000234579.A.b #24	ENSGT00940000157909 #26	ENSGT01000000214434.A #27	ENSGT00670000098080 #28	ENSGT00940000155714 #29	ENSGT00950000183097.a.b #30	ENSGT01060000248594.f #31	ENSGT00940000157649 #32	ENSGT00940000162334 #33	ENSGT00390000010687.a.a #34	ENSGT00940000161292 #35	ENSGT00940000160094 #37	ENSGT00520000055625.b	ENSGT01030000234558.A.a.b
Strepsirrhini	ANCESTRAL SPECIES	1	ENSGT00940000157522	ENSGT00940000162075	ENSGT00390000007772.a	ENSGT00390000006095	ENSGT00900000141083.d	ENSGT00940000160165	ENSGT00940000159675 #13	ENSGT00950000183179.b.b #14	ENSGT00950000183086.a.a.b #15	ENSGT00530000064220 #16	ENSGT00940000154369.d #17	ENSGT01030000234629.C #18	ENSGT00390000016324 #19	ENSGT00940000161449 #20	ENSGT00940000158201 #21	ENSGT00940000155481 #22	ENSGT00940000160511 #23	ENSGT01030000234579.A.b #24	ENSGT00940000157909.d #26	ENSGT01000000214434.A #27	ENSGT00670000098080 #28	ENSGT00940000155714 #29	ENSGT00950000183097.a.b #30	ENSGT01060000248594.f #31	ENSGT00940000157649 #32	ENSGT00940000162334 #33	ENSGT00390000010687.a.a #34	ENSGT00940000161292 #35	ENSGT00940000160094 #37	ENSGT00520000055625.b	ENSGT01030000234558.A.a.b
Lemuriformes	ANCESTRAL SPECIES	30	ENSGT00940000157522	ENSGT00940000162075	ENSGT00390000007772.a	ENSGT00390000006095	ENSGT00900000141083.d	ENSGT00940000160165	ENSGT00940000159675 #13	ENSGT00950000183179.b.b #14	ENSGT00950000183086.a.a.b #15	ENSGT00530000064220 #16	ENSGT00940000154369.d #17	ENSGT01030000234629.C #18	ENSGT00390000016324 #19	ENSGT00940000161449 #20	ENSGT00940000158201 #21	ENSGT00940000155481 #22	ENSGT00940000160511 #23	ENSGT01030000234579.A.b #24	ENSGT00940000157909.d #26	ENSGT01000000214434.A #27	ENSGT00670000098080 #28	ENSGT00940000155714 #29	ENSGT00950000183097.a.b #30	ENSGT01060000248594.f #31	ENSGT00940000157649 #32	ENSGT00940000162334 #33	ENSGT00390000010687.a.a #34	ENSGT00940000161292 #35	ENSGT00940000160094 #37	ENSGT00520000055625.b	ENSGT01030000234558.A.a.b
Mouse lemur	MODERN SPECIES		ENSMICG00000049189 #7	PPM1L (ENSMICG00000049405) #8	ENSMICG00000049361 #9	NMD3 (ENSMICG00000049196) #10	SPTSSB (ENSMICG00000048968) #11	OTOL1 (ENSMICG00000049331) #12	RBP1 (ENSMICG00000048900) #13	ENSMICG00000048995 #14	CLSTN2 (ENSMICG00000049019) #15	TRIM42 (ENSMICG00000049317) #16	ENSMICG00000048906 #17	SPSB4 (ENSMICG00000049106) #18	PXYLP1 (ENSMICG00000048945) #19	ZBTB38 (ENSMICG00000049344) #20	RASA2 (ENSMICG00000049339) #21	RNF7 (ENSMICG00000049320) #22	GRK7 (ENSMICG00000049413) #23	ATP1B3 (ENSMICG00000049313) #24	ENSMICG00000049520 #25	TFDP2 (ENSMICG00000049186) #26	GK5 (ENSMICG00000049424) #27	XRN1 (ENSMICG00000048948) #28	ATR (ENSMICG00000049477) #29	PLS1 (ENSMICG00000049092) #30	TRPC1 (ENSMICG00000049470) #31	PCOLCE2 (ENSMICG00000048890) #32	PAQR9 (ENSMICG00000049417) #33	U2SURP (ENSMICG00000049294) #34	CHST2 (ENSMICG00000048867) #35	ENSMICG00000049556 #36	SLC9A9 (ENSMICG00000049232) #37
Lemuriformes_a	ANCESTRAL SPECIES	53	ENSGT00390000007364	ENSGT00940000157522	ENSGT00390000007772.a	ENSGT00390000006095	ENSGT00900000141083.d	ENSGT00940000160165	ENSGT00940000159675 #13	ENSGT00950000183179.b.b #14	ENSGT00950000183086.a.a.b #15	ENSGT00530000064220 #16	ENSGT00940000154369.d #17	ENSGT01030000234629.C #18	ENSGT00390000016324 #19	ENSGT00940000161449 #20	ENSGT00940000158201 #21	ENSGT00940000155481 #22	ENSGT00940000160511 #23	ENSGT01030000234579.A.b #24	ENSGT00940000157909.d #26	ENSGT00940000153988.B.f	ENSGT01000000214434.A #27	ENSGT00670000098080 #28	ENSGT00940000155714 #29	ENSGT00950000183097.a.b #30	ENSGT01060000248594.f #31	ENSGT00940000157649 #32	ENSGT00940000162334 #33	ENSGT00390000010687.a.a #34	ENSGT00940000161292 #35	ENSGT00940000160094 #37	ENSGT00520000055625.b
Greater bamboo lemur	MODERN SPECIES	413	ENSPSMG00000020236	MRPS22 (ENSPSMG00000020288)	COPB2 (ENSPSMG00000020353)	ENSPSMG00000020368	RBP2 (ENSPSMG00000020371)	RBP1 (ENSPSMG00000020385) #13	NMNAT3 (ENSPSMG00000020415) #14	CLSTN2 (ENSPSMG00000020453) #15	TRIM42 (ENSPSMG00000020469) #16	SLC25A36 (ENSPSMG00000020544) #17	ENSPSMG00000020562	SPSB4 (ENSPSMG00000020563) #18	PXYLP1 (ENSPSMG00000020682) #19	ZBTB38 (ENSPSMG00000020710) #20	RASA2 (ENSPSMG00000020773) #21	RNF7 (ENSPSMG00000020807) #22	GRK7 (ENSPSMG00000020813) #23	ATP1B3 (ENSPSMG00000020824) #24
Coquerels sifaka	DUPLICATION
Coquerels sifaka	MODERN SPECIES	847											PARD3B (ENSPCOG00000018611)	NRP2 (ENSPCOG00000020112)	INO80D (ENSPCOG00000024934)	ENSPCOG00000018961	EEF1B2 (ENSPCOG00000016289)	ENSPCOG00000013632 #22	ZDBF2 (ENSPCOG00000019226)	ADAM23 (ENSPCOG00000023473)	FAM237A (ENSPCOG00000018015)	DYTN (ENSPCOG00000020018)	MDH1B (ENSPCOG00000017083)	FASTKD2 (ENSPCOG00000028714)	CPO (ENSPCOG00000028646)	KLF7 (ENSPCOG00000018231)	CREB1 (ENSPCOG00000021255)	METTL21A (ENSPCOG00000018442)	ENSPCOG00000013286	FZD5 (ENSPCOG00000011393)	PLEKHM3 (ENSPCOG00000024736)	ENSPCOG00000017843	CRYGC (ENSPCOG00000004093)
Coquerels sifaka	MODERN SPECIES	382														PXYLP1 (ENSPCOG00000027701) #19	RASA2 (ENSPCOG00000016241) #21	RNF7 (ENSPCOG00000023214) #22	GRK7 (ENSPCOG00000015353) #23	ATP1B3 (ENSPCOG00000021420) #24	TFDP2 (ENSPCOG00000023612) #26	ENSPCOG00000014830	ENSPCOG00000027161	GK5 (ENSPCOG00000026596) #27	ENSPCOG00000028141	XRN1 (ENSPCOG00000013089) #28	ATR (ENSPCOG00000019808) #29	PLS1 (ENSPCOG00000022615) #30	TRPC1 (ENSPCOG00000011684) #31	PCOLCE2 (ENSPCOG00000023954) #32	U2SURP (ENSPCOG00000019599) #34	CHST2 (ENSPCOG00000007360) #35	SLC9A9 (ENSPCOG00000023066) #37
Bushbaby	MODERN SPECIES	147	ENSOGAG00000031233	ENSOGAG00000024655	MRPS22 (ENSOGAG00000010261)	COPB2 (ENSOGAG00000010265)	RBP2 (ENSOGAG00000010271)	ENSOGAG00000033121	RBP1 (ENSOGAG00000004262) #13	NMNAT3 (ENSOGAG00000004263) #14	CLSTN2 (ENSOGAG00000017033) #15	TRIM42 (ENSOGAG00000009994) #16	SLC25A36 (ENSOGAG00000003805) #17	SPSB4 (ENSOGAG00000027600) #18	PXYLP1 (ENSOGAG00000009393) #19	ZBTB38 (ENSOGAG00000009394) #20	RASA2 (ENSOGAG00000002470) #21	RNF7 (ENSOGAG00000008659) #22	GRK7 (ENSOGAG00000009576) #23	ATP1B3 (ENSOGAG00000008662) #24	TFDP2 (ENSOGAG00000000168) #26	GK5 (ENSOGAG00000000169) #27	XRN1 (ENSOGAG00000000170) #28	ATR (ENSOGAG00000000171) #29	PLS1 (ENSOGAG00000000755) #30	TRPC1 (ENSOGAG00000000759) #31	PCOLCE2 (ENSOGAG00000013136) #32	PAQR9 (ENSOGAG00000003917) #33	U2SURP (ENSOGAG00000004335) #34	CHST2 (ENSOGAG00000027881) #35	SLC9A9 (ENSOGAG00000004342) #37	DIPK2A (ENSOGAG00000011489)	ENSOGAG00000024209
Haplorrhini	ANCESTRAL SPECIES	5	ENSGT00940000157522	ENSGT00940000162075	ENSGT00390000007772.a	ENSGT00390000006095	ENSGT00900000141083.d	ENSGT00940000160165	ENSGT00940000159675 #13	ENSGT00950000183179.b.b #14	ENSGT00950000183086.a.a.b #15	ENSGT00530000064220 #16	ENSGT00940000154369.d #17	ENSGT01030000234629.C #18	ENSGT00390000016324 #19	ENSGT00940000161449 #20	ENSGT00940000158201 #21	ENSGT00940000155481 #22	ENSGT00940000160511 #23	ENSGT01030000234579.A.b #24	ENSGT00940000157909 #26	ENSGT01000000214434.A #27	ENSGT00670000098080 #28	ENSGT00940000155714 #29	ENSGT00950000183097.a.b #30	ENSGT01060000248594.f #31	ENSGT00940000157649 #32	ENSGT00940000162334 #33	ENSGT00390000010687.a.a #34	ENSGT00940000161292 #35	ENSGT00940000160094 #37	ENSGT00520000055625.b	ENSGT01030000234558.A.a.b
Tarsier	MODERN SPECIES	5857																RNF7 (ENSTSYG00000007778) #22	GRK7 (ENSTSYG00000014753) #23
Simiiformes	DUPLICATION
Simiiformes	DUPLICATION
Simiiformes	ANCESTRAL SPECIES																	ENSGT00940000155481.u.a #22
Platyrrhini	ANCESTRAL SPECIES	22	ENSGT00940000162075	ENSGT00410000029590	ENSGT00390000007772.a	ENSGT00390000006095	ENSGT00900000141083.d	ENSGT00940000160165	ENSGT00940000159675 #13	ENSGT00950000183179.b.b #14	ENSGT00950000183086.a.a.b #15	ENSGT00530000064220 #16	ENSGT00940000154369.d #17	ENSGT01030000234629.C #18	ENSGT00390000016324 #19	ENSGT00940000161449 #20	ENSGT00940000158201 #21	ENSGT00940000155481.u.a #22	ENSGT00940000160511 #23	ENSGT01030000234579.A.b.y.a #24	ENSGT00940000157909 #26	ENSGT01000000214434.A #27	ENSGT00670000098080 #28	ENSGT00940000155714 #29	ENSGT00950000183097.a.b #30	ENSGT01060000248594.f #31	ENSGT00940000157649 #32	ENSGT00940000162334 #33	ENSGT00390000010687.a.a #34	ENSGT00940000161292 #35	ENSGT00940000160094 #37	ENSGT00520000055625.b	ENSGT01030000234558.A.a.b
Cebidae	ANCESTRAL SPECIES	22	ENSGT00940000162075	ENSGT00410000029590	ENSGT00390000007772.a.e	ENSGT00390000006095	ENSGT00900000141083.d	ENSGT00940000160165	ENSGT00940000159675 #13	ENSGT00950000183179.b.b #14	ENSGT00950000183086.a.a.b #15	ENSGT00530000064220 #16	ENSGT00940000154369.d #17	ENSGT01030000234629.C #18	ENSGT00390000016324 #19	ENSGT00940000161449 #20	ENSGT00940000158201 #21	ENSGT00940000155481.u.a #22	ENSGT00940000160511 #23	ENSGT01030000234579.A.b.y.a #24	ENSGT00940000157909 #26	ENSGT01000000214434.A #27	ENSGT00670000098080 #28	ENSGT00940000155714 #29	ENSGT00950000183097.a.b #30	ENSGT01060000248594.f #31	ENSGT00940000157649 #32	ENSGT00940000162334 #33	ENSGT00390000010687.a.a #34	ENSGT00940000161292 #35	ENSGT00940000160094 #37	ENSGT00520000055625.b	ENSGT01030000234558.A.a.b
Cebidae_a	ANCESTRAL SPECIES	12	ENSGT00390000007364	ENSGT00940000157522	ENSGT00410000029590	ENSGT00390000007772.a.e	ENSGT00390000006095	ENSGT00900000141083.d	ENSGT00940000160165	ENSGT00940000159675 #13	ENSGT00950000183179.b.b #14	ENSGT00950000183086.a.a.b #15	ENSGT00530000064220 #16	ENSGT00940000154369.d #17	ENSGT01030000234629.C #18	ENSGT00390000016324 #19	ENSGT00940000158201 #21	ENSGT00940000155481.u.a #22	ENSGT00940000160511 #23	ENSGT01030000234579.A.b.z #24	ENSGT00940000157909 #26	ENSGT01000000214434.A #27	ENSGT00670000098080 #28	ENSGT00940000155714 #29	ENSGT00950000183097.a.b.k #30	ENSGT01060000248594.f #31	ENSGT00940000157649 #32	ENSGT00940000162334 #33	ENSGT00390000010687.a.a #34	ENSGT00940000161292 #35	ENSGT00940000160094 #37	ENSGT00520000055625.b	ENSGT01030000234558.A.a.b
Capuchin	MODERN SPECIES	30	ENSCCAG00000030899	PIK3CB (ENSCCAG00000028623)	FOXL2NB (ENSCCAG00000029666)	ENSCCAG00000001067	MRPS22 (ENSCCAG00000031308)	COPB2 (ENSCCAG00000022997)	RBP2 (ENSCCAG00000034429)	RBP1 (ENSCCAG00000037002) #13	NMNAT3 (ENSCCAG00000036866) #14	CLSTN2 (ENSCCAG00000029042) #15	TRIM42 (ENSCCAG00000033251) #16	SLC25A36 (ENSCCAG00000036553) #17	SPSB4 (ENSCCAG00000032923) #18	PXYLP1 (ENSCCAG00000037463) #19	RASA2 (ENSCCAG00000037845) #21	RNF7 (ENSCCAG00000020264) #22	GRK7 (ENSCCAG00000025796) #23	ENSCCAG00000034843 #24	TFDP2 (ENSCCAG00000026731) #26	ENSCCAG00000032480	GK5 (ENSCCAG00000028734) #27	XRN1 (ENSCCAG00000034800) #28	ATR (ENSCCAG00000037606) #29	ENSCCAG00000002177 #30	TRPC1 (ENSCCAG00000034231) #31	PCOLCE2 (ENSCCAG00000033830) #32	PAQR9 (ENSCCAG00000029369) #33	U2SURP (ENSCCAG00000032530) #34	CHST2 (ENSCCAG00000020600) #35	SLC9A9 (ENSCCAG00000034947) #37	DIPK2A (ENSCCAG00000020146)
Bolivian squirrel monkey	MODERN SPECIES	204			FOXL2NB (ENSSBOG00000027764)	ENSSBOG00000023833	MRPS22 (ENSSBOG00000006732)	COPB2 (ENSSBOG00000029777)	RBP2 (ENSSBOG00000026602)	RBP1 (ENSSBOG00000029287) #13	NMNAT3 (ENSSBOG00000021646) #14	CLSTN2 (ENSSBOG00000028495) #15	TRIM42 (ENSSBOG00000024063) #16	SLC25A36 (ENSSBOG00000033900) #17	SPSB4 (ENSSBOG00000027901) #18	PXYLP1 (ENSSBOG00000030966) #19	RASA2 (ENSSBOG00000015504) #21	ENSSBOG00000020609 #22	GRK7 (ENSSBOG00000029455) #23	ATP1B3 (ENSSBOG00000025166) #24	ENSSBOG00000005873	TFDP2 (ENSSBOG00000029977) #26	GK5 (ENSSBOG00000010917) #27	XRN1 (ENSSBOG00000029561) #28	ATR (ENSSBOG00000031886) #29	PLS1 (ENSSBOG00000026765) #30	TRPC1 (ENSSBOG00000025787) #31	PCOLCE2 (ENSSBOG00000027101) #32	CMTM8 (ENSSBOG00000032763)
Marmoset	MODERN SPECIES	8	MRPS22 (ENSCJAG00000002236)	COPB2 (ENSCJAG00000002200)	RBP2 (ENSCJAG00000002188)	ENSCJAG00000085868 #13	ENSCJAG00000079234	NMNAT3 (ENSCJAG00000041699) #14	CLSTN2 (ENSCJAG00000002137) #15	TRIM42 (ENSCJAG00000002126) #16	SLC25A36 (ENSCJAG00000002092) #17	SPSB4 (ENSCJAG00000002091) #18	PXYLP1 (ENSCJAG00000002072) #19	ENSCJAG00000079923	ZBTB38 (ENSCJAG00000048397) #20	ENSCJAG00000076787	RASA2 (ENSCJAG00000001994) #21	ENSCJAG00000082838 #22	GRK7 (ENSCJAG00000001987) #23	ENSCJAG00000001981 #24	ENSCJAG00000001950 #26	GK5 (ENSCJAG00000001924) #27	XRN1 (ENSCJAG00000001872) #28	ATR (ENSCJAG00000001797) #29	PLS1 (ENSCJAG00000001762) #30	TRPC1 (ENSCJAG00000001739) #31	PCOLCE2 (ENSCJAG00000001714) #32	PAQR9 (ENSCJAG00000040620) #33	U2SURP (ENSCJAG00000001639) #34	ENSCJAG00000052027	SLC9A9 (ENSCJAG00000001617) #37	DIPK2A (ENSCJAG00000001605)	ENSCJAG00000078272
Mas night monkey	MODERN SPECIES	401									ENSANAG00000032380	SLC25A36 (ENSANAG00000028870) #17	SPSB4 (ENSANAG00000033201) #18	ENSANAG00000025990 #19	ZBTB38 (ENSANAG00000017076) #20	RASA2 (ENSANAG00000034912) #21	ENSANAG00000032669	ENSANAG00000028682 #22	GRK7 (ENSANAG00000034218) #23	ENSANAG00000031514 #24	TFDP2 (ENSANAG00000022473) #26	GK5 (ENSANAG00000028250) #27	XRN1 (ENSANAG00000029013) #28	ATR (ENSANAG00000025376) #29	PLS1 (ENSANAG00000033207) #30	TRPC1 (ENSANAG00000020387) #31	PCOLCE2 (ENSANAG00000033412) #32	U2SURP (ENSANAG00000035774) #34	CHST2 (ENSANAG00000015893) #35	SLC9A9 (ENSANAG00000020698) #37	DIPK2A (ENSANAG00000037040)	PLOD2 (ENSANAG00000030377)	PLSCR4 (ENSANAG00000003079)
Catarrhini	ANCESTRAL SPECIES																	ENSGT00940000155481.u.a #22
Cercopithecidae	ANCESTRAL SPECIES	1	ENSGT00950000183004.a.a.a.a	ENSGT00390000011228.b.a	ENSGT00940000160985	ENSGT00940000157869	ENSGT00940000155146	ENSGT00390000017669	ENSGT00530000065109	ENSGT00510000048121	ENSGT00510000047225	ENSGT00950000182846.a.a.a.b	ENSGT00940000156286.pb	ENSGT00940000157660	ENSGT00390000005529.a	ENSGT00940000156297	ENSGT00940000157205	ENSGT00940000155481.u.a #22	ENSGT00940000154280	ENSGT00940000159724.k.b	ENSGT00940000156550	ENSGT00940000156624	ENSGT00940000156780	ENSGT00910000147101	ENSGT00940000156669.b	ENSGT00390000008817	ENSGT00940000158385	ENSGT00530000063735.a	ENSGT00390000012411	ENSGT00910000147921	ENSGT00650000093320.a.b	ENSGT00940000158894	ENSGT00940000155766.a
Cercopithecinae	ANCESTRAL SPECIES	5	ENSGT00950000183004.a.a.a.a	ENSGT00390000011228.b.a	ENSGT00940000160985	ENSGT00940000157869	ENSGT00940000155146	ENSGT00390000017669	ENSGT00530000065109	ENSGT00510000048121	ENSGT00510000047225	ENSGT00950000182846.a.a.a.b	ENSGT00940000156286.pb	ENSGT00940000157660	ENSGT00390000005529.a	ENSGT00940000156297	ENSGT00940000157205	ENSGT00940000155481.u.a #22	ENSGT00940000154280	ENSGT00940000159724.k.b	ENSGT00940000156550	ENSGT00940000156624	ENSGT00940000156780	ENSGT00910000147101	ENSGT00940000156669.b	ENSGT00390000008817	ENSGT00940000158385	ENSGT00530000063735.a	ENSGT00390000012411	ENSGT00650000093320.a.b	ENSGT00940000158894	ENSGT00940000158933	ENSGT00940000155766.a
Cercopithecinae_a	ANCESTRAL SPECIES	5	ENSGT00950000183004.a.a.a.a	ENSGT00390000011228.b.a	ENSGT00940000160985	ENSGT00940000157869	ENSGT00940000155146	ENSGT00390000017669	ENSGT00530000065109	ENSGT00510000048121	ENSGT00510000047225	ENSGT00950000182846.a.a.a.b	ENSGT00940000156286.pb	ENSGT00940000157660	ENSGT00390000005529.a	ENSGT00940000156297	ENSGT00940000157205	ENSGT00940000155481.u.a #22	ENSGT00940000154280	ENSGT00940000162741.j.b.b	ENSGT00940000159724.k.b	ENSGT00940000156550	ENSGT00940000156624	ENSGT00940000156780	ENSGT00910000147101	ENSGT00940000156669.b	ENSGT00390000008817	ENSGT00940000158385	ENSGT00530000063735.a	ENSGT00390000012411	ENSGT00900000142763.e.a	ENSGT00650000093320.a.b	ENSGT00940000158894
Cercopithecinae_b	ANCESTRAL SPECIES		ENSGT00950000183004.a.a.a.a	ENSGT00390000011228.b.a	ENSGT00940000160985	ENSGT00940000157869	ENSGT00940000155146	ENSGT00390000017669	ENSGT00530000065109	ENSGT00510000048121	ENSGT00510000047225	ENSGT00950000182846.a.a.a.b	ENSGT00940000156286.pb	ENSGT00940000157660	ENSGT00390000005529.a	ENSGT00940000156297	ENSGT00940000157205	ENSGT00940000155481.u.a #22	ENSGT00940000154280	ENSGT00940000162741.j.b.b	ENSGT00940000159724.k.b	ENSGT00940000156550	ENSGT00940000156624	ENSGT00940000156780	ENSGT00940000156669.b	ENSGT00390000008817	ENSGT00940000158385	ENSGT00530000063735.a	ENSGT00390000012411	ENSGT00650000093320.a.b	ENSGT00900000142763.e.a	ENSGT00940000158894	ENSGT00940000155766.a
Cercopithecinae_d	ANCESTRAL SPECIES	12	ENSGT00950000183004.a.a.a.a	ENSGT00390000011228.b.a	ENSGT00940000160985	ENSGT00940000157869	ENSGT00940000155146	ENSGT00390000017669	ENSGT00530000065109	ENSGT00510000048121	ENSGT00510000047225	ENSGT00950000182846.a.a.a.b	ENSGT00940000156286.pb	ENSGT00940000157660	ENSGT00390000005529.a	ENSGT00940000156297	ENSGT00940000157205	ENSGT00940000155481.u.a #22	ENSGT00940000154280	ENSGT00940000162741.j.b.b	ENSGT00940000159724.k.b	ENSGT00940000156550	ENSGT00940000156624	ENSGT00940000156780	ENSGT00940000156669.b	ENSGT00910000147101	ENSGT00940000158385	ENSGT00530000063735.a	ENSGT00390000012411	ENSGT00650000093320.a.b	ENSGT00900000142763.e.a	ENSGT00940000158894	ENSGT00940000155766.a
Sooty mangabey	MODERN SPECIES	650	FAM3D (ENSCATG00000042717)	FAM107A (ENSCATG00000036228)	ACOX2 (ENSCATG00000038077)	KCTD6 (ENSCATG00000032690)	PDHB (ENSCATG00000033647)	PXK (ENSCATG00000040881)	HTD2 (ENSCATG00000036301)	RPP14 (ENSCATG00000044209)	ABHD6 (ENSCATG00000043430)	DNASE1L3 (ENSCATG00000033881)	FLNB (ENSCATG00000043450)	SLMAP (ENSCATG00000034577)	DENND6A (ENSCATG00000033270)	ARF4 (ENSCATG00000044002)	PDE12 (ENSCATG00000044539)	ENSCATG00000035398 #22	ENSCATG00000044219	DNAH12 (ENSCATG00000012759)	ASB14 (ENSCATG00000035996)	APPL1 (ENSCATG00000038479)	ENSCATG00000006494	HESX1 (ENSCATG00000040387)	ENSCATG00000031391	IL17RD (ENSCATG00000033721)	ARHGEF3 (ENSCATG00000009402)	TASOR (ENSCATG00000035018)	CCDC66 (ENSCATG00000038071)	ENSCATG00000036518	ERC2 (ENSCATG00000041843)	WNT5A (ENSCATG00000032076)	LRTM1 (ENSCATG00000030337)
Macaca	ANCESTRAL SPECIES	5	ENSGT00950000183004.a.a.a.a	ENSGT00390000011228.b.a	ENSGT00940000160985	ENSGT00940000157869	ENSGT00940000155146	ENSGT00390000017669	ENSGT00530000065109	ENSGT00510000048121	ENSGT00510000047225	ENSGT00950000182846.a.a.a.b	ENSGT00940000156286.pb	ENSGT00940000157660	ENSGT00390000005529.a	ENSGT00940000156297	ENSGT00940000157205	ENSGT00940000155481.u.a #22	ENSGT00940000154280	ENSGT00940000162741.j.b.b	ENSGT00940000159724.k.b	ENSGT00940000156550	ENSGT00940000156624	ENSGT00940000156780	ENSGT00910000147101	ENSGT00940000156669.b	ENSGT00390000008817	ENSGT00940000158385	ENSGT00530000063735.a	ENSGT00390000012411	ENSGT00900000142763.e.a	ENSGT00650000093320.a.b	ENSGT00940000158894
Pig-tailed macaque	MODERN SPECIES	106	FAM107A (ENSMNEG00000042838)	ACOX2 (ENSMNEG00000032610)	KCTD6 (ENSMNEG00000040452)	PDHB (ENSMNEG00000036075)	PXK (ENSMNEG00000033433)	HTD2 (ENSMNEG00000035045)	RPP14 (ENSMNEG00000028567)	ABHD6 (ENSMNEG00000037859)	ENSMNEG00000001241	DNASE1L3 (ENSMNEG00000034780)	FLNB (ENSMNEG00000035632)	SLMAP (ENSMNEG00000032830)	DENND6A (ENSMNEG00000004566)	ARF4 (ENSMNEG00000034663)	PDE12 (ENSMNEG00000030068)	ENSMNEG00000041810 #22	ENSMNEG00000044147	ENSMNEG00000005740	DNAH12 (ENSMNEG00000037293)	ENSMNEG00000024751	ASB14 (ENSMNEG00000045323)	APPL1 (ENSMNEG00000033292)	HESX1 (ENSMNEG00000028993)	ENSMNEG00000040386	IL17RD (ENSMNEG00000029993)	ARHGEF3 (ENSMNEG00000028448)	TASOR (ENSMNEG00000029881)	CCDC66 (ENSMNEG00000039408)	ENSMNEG00000036857	ERC2 (ENSMNEG00000034102)
Rhinopithecus	ANCESTRAL SPECIES	173	ENSGT00950000183004.a.a.a.a	ENSGT00390000011228.b.a	ENSGT00940000160985	ENSGT00940000157869	ENSGT00940000155146	ENSGT00390000017669	ENSGT00530000065109	ENSGT00510000048121	ENSGT00510000047225	ENSGT00950000182846.a.a.a.b	ENSGT00940000156286.pb	ENSGT00940000157660	ENSGT00390000005529.a	ENSGT00940000156297	ENSGT00940000157205	ENSGT00940000155481.u.a #22	ENSGT00940000154280	ENSGT00940000159724.k.b	ENSGT00940000156550	ENSGT00940000156624	ENSGT00390000009405.b.c.a.b.a	ENSGT00940000156780	ENSGT00940000156669.b	ENSGT00940000158385	ENSGT00530000063735.a	ENSGT00390000012411	ENSGT00910000147921	ENSGT00650000093320.a.b	ENSGT00940000158894
Golden snub-nosed monkey	MODERN SPECIES	881	FAM107A (ENSRROG00000044494)	ACOX2 (ENSRROG00000042193)	KCTD6 (ENSRROG00000035541)	PDHB (ENSRROG00000004890)	PXK (ENSRROG00000044268)	HTD2 (ENSRROG00000030647)	RPP14 (ENSRROG00000045678)	ABHD6 (ENSRROG00000037362)	DNASE1L3 (ENSRROG00000044465)	FLNB (ENSRROG00000041820)	ENSRROG00000026669	SLMAP (ENSRROG00000041937)	DENND6A (ENSRROG00000039060)	ARF4 (ENSRROG00000034971)	PDE12 (ENSRROG00000031279)	ENSRROG00000034900 #22	ENSRROG00000003372	DNAH12 (ENSRROG00000033333)	ASB14 (ENSRROG00000034785)	APPL1 (ENSRROG00000033584)	ENSRROG00000039038	HESX1 (ENSRROG00000032315)	IL17RD (ENSRROG00000023719)	ARHGEF3 (ENSRROG00000036679)	TASOR (ENSRROG00000008200)	CCDC66 (ENSRROG00000041251)
Black snub-nosed monkey	MODERN SPECIES	1174	FAM107A (ENSRBIG00000027909)	ACOX2 (ENSRBIG00000044259)	KCTD6 (ENSRBIG00000033835)	PDHB (ENSRBIG00000030636)	PXK (ENSRBIG00000031289)	HTD2 (ENSRBIG00000029042)	RPP14 (ENSRBIG00000031797)	ABHD6 (ENSRBIG00000034261)	DNASE1L3 (ENSRBIG00000029448)	FLNB (ENSRBIG00000028391)	ENSRBIG00000032653	SLMAP (ENSRBIG00000040826)	DENND6A (ENSRBIG00000035704)	ARF4 (ENSRBIG00000034461)	PDE12 (ENSRBIG00000040704)	ENSRBIG00000010504 #22	ENSRBIG00000030897	DNAH12 (ENSRBIG00000026898)	ASB14 (ENSRBIG00000035774)	APPL1 (ENSRBIG00000042486)	ENSRBIG00000037327	HESX1 (ENSRBIG00000043987)	IL17RD (ENSRBIG00000031337)	ARHGEF3 (ENSRBIG00000002814)	TASOR (ENSRBIG00000035438)	CCDC66 (ENSRBIG00000027786)	ENSRBIG00000029359	ERC2 (ENSRBIG00000032949)	WNT5A (ENSRBIG00000043917)
Simiiformes	ANCESTRAL SPECIES	1	ENSGT00940000162075	ENSGT00410000029590	ENSGT00390000007772.a	ENSGT00390000006095	ENSGT00900000141083.d	ENSGT00940000160165	ENSGT00940000159675 #13	ENSGT00950000183179.b.b #14	ENSGT00950000183086.a.a.b #15	ENSGT00530000064220 #16	ENSGT00940000154369.d #17	ENSGT01030000234629.C #18	ENSGT00390000016324 #19	ENSGT00940000161449 #20	ENSGT00940000158201 #21	ENSGT00940000155481.u.b #22	ENSGT00940000160511 #23	ENSGT01030000234579.A.b #24	ENSGT00940000157909 #26	ENSGT01000000214434.A #27	ENSGT00670000098080 #28	ENSGT00940000155714 #29	ENSGT00950000183097.a.b #30	ENSGT01060000248594.f #31	ENSGT00940000157649 #32	ENSGT00940000162334 #33	ENSGT00390000010687.a.a #34	ENSGT00940000161292 #35	ENSGT00940000160094 #37	ENSGT00520000055625.b	ENSGT01030000234558.A.a.b
Catarrhini	ANCESTRAL SPECIES	2	ENSGT00910000147082	ENSGT00390000006095	ENSGT00900000141083.d	ENSGT00940000160165	ENSGT00940000159675 #13	ENSGT00950000183179.b.b #14	ENSGT00950000183086.a.a.b #15	ENSGT00530000064220 #16	ENSGT00940000154369.d #17	ENSGT01030000234629.C #18	ENSGT00390000016324 #19	ENSGT00940000161449 #20	ENSGT00940000158201 #21	ENSGT00940000155481.v #22	ENSGT01090000260040.b.b.b.b.a.a.a.a	ENSGT00940000155481.u.b #22	ENSGT00940000160511 #23	ENSGT01030000234579.A.b.x #24	ENSGT00940000157909 #26	ENSGT01000000214434.A #27	ENSGT00670000098080 #28	ENSGT00940000155714 #29	ENSGT00950000183097.a.b #30	ENSGT01060000248594.f #31	ENSGT00940000157649 #32	ENSGT00940000162334 #33	ENSGT00390000010687.a.a #34	ENSGT00940000161292 #35	ENSGT00940000160094 #37	ENSGT00520000055625.b	ENSGT01030000234558.A.a.b
Cercopithecidae	ANCESTRAL SPECIES	1	ENSGT00910000147180	ENSGT00910000147082	ENSGT00390000006095.s	ENSGT00900000141083.d	ENSGT00940000160165	ENSGT00940000159675 #13	ENSGT00950000183179.b.b #14	ENSGT00950000183086.a.a.b #15	ENSGT00530000064220 #16	ENSGT00940000154369.d #17	ENSGT01030000234629.C #18	ENSGT00390000016324 #19	ENSGT00940000161449 #20	ENSGT00940000158201 #21	ENSGT01090000260040.b.b.b.b.a.a.a.a	ENSGT00940000155481.u.b #22	ENSGT00940000160511 #23	ENSGT01030000234579.A.b.x #24	ENSGT00940000157909 #26	ENSGT00510000046985.i	ENSGT01000000214434.A #27	ENSGT00940000156225.d	ENSGT00670000098080 #28	ENSGT00940000155714 #29	ENSGT00950000183097.a.b #30	ENSGT01060000248594.f #31	ENSGT00940000157649 #32	ENSGT00940000162334 #33	ENSGT00390000010687.a.a #34	ENSGT00940000161292 #35	ENSGT00940000160094 #37
Rhinopithecus	DUPLICATION
Rhinopithecus	DUPLICATION
Rhinopithecus	ANCESTRAL SPECIES																	ENSGT00940000155481.u.b.a.a #22
Black snub-nosed monkey	MODERN SPECIES	2760																ENSRBIG00000011600 #22
Golden snub-nosed monkey	MODERN SPECIES	247																ENSRROG00000029379 #22
Rhinopithecus	ANCESTRAL SPECIES	1046															ENSGT01090000260040.b.b.b.b.a.a.a.a	ENSGT00940000155481.u.b.a.b #22
Golden snub-nosed monkey	MODERN SPECIES	2072								TRIM42 (ENSRROG00000033793) #16	SLC25A36 (ENSRROG00000037476) #17	ENSRROG00000028830	SPSB4 (ENSRROG00000043824) #18	PXYLP1 (ENSRROG00000022663) #19	ZBTB38 (ENSRROG00000009960) #20	RASA2 (ENSRROG00000039486) #21	ENSRROG00000038402	ENSRROG00000030523 #22	GRK7 (ENSRROG00000038885) #23	ATP1B3 (ENSRROG00000030567) #24	TFDP2 (ENSRROG00000033835) #26	ENSRROG00000034265	GK5 (ENSRROG00000029129) #27	ENSRROG00000043111	ENSRROG00000044183 #28
Rhinopithecus	ANCESTRAL SPECIES	110	ENSGT00940000162075	ENSGT00410000029590	ENSGT00910000147180	ENSGT00390000006095.s	ENSGT00900000141083.d	ENSGT00940000160165	ENSGT00940000159675 #13	ENSGT00950000183179.b.b #14	ENSGT00950000183086.a.a.b #15	ENSGT00530000064220 #16	ENSGT00940000154369.d #17	ENSGT01030000234629.C #18	ENSGT00390000016324 #19	ENSGT00940000161449 #20	ENSGT00940000158201 #21	ENSGT00940000155481.u.b.b #22	ENSGT00940000160511 #23	ENSGT01030000234579.A.b.x #24	ENSGT00940000157909 #26	ENSGT00510000046985.i	ENSGT01000000214434.A #27	ENSGT00940000156225.d	ENSGT00670000098080 #28	ENSGT00940000155714 #29	ENSGT00950000183097.a.b #30	ENSGT01060000248594.f #31	ENSGT00940000157649 #32	ENSGT00940000162334 #33	ENSGT00390000010687.a.a #34	ENSGT00940000161292 #35	ENSGT00940000160094 #37
Black snub-nosed monkey	MODERN SPECIES	179	NRIP2 (ENSRBIG00000044778)	TEX52 (ENSRBIG00000031789)	FOXM1 (ENSRBIG00000040049)	ENSRBIG00000030577	TULP3 (ENSRBIG00000021272)	TEAD4 (ENSRBIG00000040472)	ENSRBIG00000032250	ENSRBIG00000044978	TSPAN9 (ENSRBIG00000027857)	PRMT8 (ENSRBIG00000039452)	CRACR2A (ENSRBIG00000044914)	SPSB4 (ENSRBIG00000029232) #18	PXYLP1 (ENSRBIG00000041829) #19	ZBTB38 (ENSRBIG00000003891) #20	RASA2 (ENSRBIG00000034092) #21	ENSRBIG00000044705 #22	GRK7 (ENSRBIG00000030500) #23	ATP1B3 (ENSRBIG00000028072) #24	TFDP2 (ENSRBIG00000027759) #26
Cercopithecinae	ANCESTRAL SPECIES	5	ENSGT00390000007772.a.d	ENSGT00910000147180	ENSGT00910000147082	ENSGT00390000006095.s	ENSGT00900000141083.d	ENSGT00940000160165	ENSGT00940000159675 #13	ENSGT00950000183179.b.b #14	ENSGT00950000183086.a.a.b #15	ENSGT00530000064220 #16	ENSGT00940000154369.d #17	ENSGT01030000234629.C #18	ENSGT00390000016324 #19	ENSGT00940000161449 #20	ENSGT00940000158201 #21	ENSGT00940000155481.u.b #22	ENSGT00940000160511 #23	ENSGT01030000234579.A.b.x #24	ENSGT00940000157909 #26	ENSGT00510000046985.i	ENSGT01000000214434.A #27	ENSGT00940000156225.d	ENSGT00670000098080 #28	ENSGT00940000155714 #29	ENSGT00950000183097.a.b #30	ENSGT01060000248594.f #31	ENSGT00940000157649 #32	ENSGT00940000162334 #33	ENSGT00390000010687.a.a #34	ENSGT00940000161292 #35	ENSGT00940000160094 #37
Vervet Monkey	MODERN SPECIES	6	PRR23A (ENSCSAG00000018915)	PRR23B (ENSCSAG00000018913)	PRR23C (ENSCSAG00000018911)	ENSCSAG00000011134	MRPS22 (ENSCSAG00000011142)	COPB2 (ENSCSAG00000011151)	RBP2 (ENSCSAG00000011158)	RBP1 (ENSCSAG00000011160) #13	NMNAT3 (ENSCSAG00000011165) #14	CLSTN2 (ENSCSAG00000011174) #15	TRIM42 (ENSCSAG00000011184) #16	SPSB4 (ENSCSAG00000011185) #18	PXYLP1 (ENSCSAG00000011192) #19	ZBTB38 (ENSCSAG00000018910) #20	RASA2 (ENSCSAG00000011201) #21	RNF7 (ENSCSAG00000011205) #22	GRK7 (ENSCSAG00000011224) #23	ATP1B3 (ENSCSAG00000011237) #24	TFDP2 (ENSCSAG00000011244) #26	GK5 (ENSCSAG00000011252) #27	XRN1 (ENSCSAG00000011265) #28	ATR (ENSCSAG00000011281) #29	PLS1 (ENSCSAG00000011290) #30	TRPC1 (ENSCSAG00000011302) #31	PCOLCE2 (ENSCSAG00000011308) #32	PAQR9 (ENSCSAG00000018908) #33	U2SURP (ENSCSAG00000011321) #34	CHST2 (ENSCSAG00000018906) #35	SLC9A9 (ENSCSAG00000011341) #37	DIPK2A (ENSCSAG00000011348)	PLOD2 (ENSCSAG00000011365)
Cercopithecinae_a	ANCESTRAL SPECIES	5	ENSGT00910000147082	ENSGT00390000006095.s	ENSGT00900000141083.d	ENSGT00940000160165	ENSGT00940000159675 #13	ENSGT00950000183179.b.b #14	ENSGT00950000183086.a.a.b #15	ENSGT00910000147512	ENSGT00910000147447	ENSGT00530000064220 #16	ENSGT00940000154369.d #17	ENSGT01030000234629.C #18	ENSGT00390000016324 #19	ENSGT00940000161449 #20	ENSGT00940000158201 #21	ENSGT00940000155481.u.b #22	ENSGT00940000160511 #23	ENSGT01030000234579.A.b.x #24	ENSGT00940000157909 #26	ENSGT00510000046985.i	ENSGT01000000214434.A #27	ENSGT00940000156225.d	ENSGT00670000098080 #28	ENSGT00940000155714 #29	ENSGT00950000183097.a.b #30	ENSGT01060000248594.f #31	ENSGT00940000157649 #32	ENSGT00940000162334 #33	ENSGT00390000010687.a.a #34	ENSGT00940000161292 #35	ENSGT00940000160094 #37
Cercopithecinae_b	ANCESTRAL SPECIES		ENSGT00910000147082	ENSGT00390000006095.s	ENSGT00900000141083.d	ENSGT00940000160165	ENSGT00940000159675 #13	ENSGT00950000183179.b.b #14	ENSGT00950000183086.a.a.b #15	ENSGT00910000147512	ENSGT00910000147447	ENSGT00530000064220 #16	ENSGT00940000154369.d #17	ENSGT01030000234629.C #18	ENSGT00390000016324 #19	ENSGT00940000161449 #20	ENSGT00940000158201 #21	ENSGT00940000155481.u.b #22	ENSGT00940000160511 #23	ENSGT01030000234579.A.b.x #24	ENSGT00940000157909 #26	ENSGT01000000214434.A #27	ENSGT00940000156225.d	ENSGT00670000098080 #28	ENSGT00940000155714 #29	ENSGT00950000183097.a.b #30	ENSGT01060000248594.f #31	ENSGT00940000157649 #32	ENSGT00390000010687.a.a #34	ENSGT00940000161292 #35	ENSGT00940000160094 #37	ENSGT00520000055625.b	ENSGT01030000234558.A.a.b
Olive baboon	MODERN SPECIES	11	ENSPANG00000031215	MRPS22 (ENSPANG00000021219)	COPB2 (ENSPANG00000007050)	RBP2 (ENSPANG00000010059)	RBP1 (ENSPANG00000036167) #13	NMNAT3 (ENSPANG00000005203) #14	CLSTN2 (ENSPANG00000017988) #15	TRIM42 (ENSPANG00000007233) #16	ENSPANG00000046237	ENSPANG00000050186	SLC25A36 (ENSPANG00000004802) #17	SPSB4 (ENSPANG00000020402) #18	PXYLP1 (ENSPANG00000018293) #19	ZBTB38 (ENSPANG00000018989) #20	RASA2 (ENSPANG00000010060) #21	RNF7 (ENSPANG00000008716) #22	GRK7 (ENSPANG00000026216) #23	ENSPANG00000051223	ATP1B3 (ENSPANG00000016869) #24	TFDP2 (ENSPANG00000005825) #26	GK5 (ENSPANG00000016944) #27	XRN1 (ENSPANG00000010638) #28	ATR (ENSPANG00000005574) #29	PLS1 (ENSPANG00000002797) #30	TRPC1 (ENSPANG00000017825) #31	PCOLCE2 (ENSPANG00000005937) #32	PAQR9 (ENSPANG00000021399) #33	ENSPANG00000031969	U2SURP (ENSPANG00000000710) #34	CHST2 (ENSPANG00000007426) #35	ENSPANG00000046116
Cercopithecinae_d	ANCESTRAL SPECIES	16	ENSGT00910000147082	ENSGT00390000006095.s	ENSGT00900000141083.d	ENSGT00940000160165	ENSGT00940000159675 #13	ENSGT00950000183179.b.b #14	ENSGT00950000183086.a.a.b #15	ENSGT00910000147512	ENSGT00910000147447	ENSGT00530000064220 #16	ENSGT00940000154369.d #17	ENSGT01030000234629.C #18	ENSGT00390000016324 #19	ENSGT00940000161449 #20	ENSGT00940000158201 #21	ENSGT00940000155481.u.b #22	ENSGT00940000160511 #23	ENSGT01030000234579.A.b.x #24	ENSGT00940000157909 #26	ENSGT01000000214434.A #27	ENSGT00940000156225.d	ENSGT00670000098080 #28	ENSGT00940000155714 #29	ENSGT00950000183097.a.b #30	ENSGT01060000248594.f #31	ENSGT00940000157649 #32	ENSGT00390000010687.a.a #34	ENSGT00940000161292 #35	ENSGT00940000160094 #37	ENSGT00520000055625.b
Drill	MODERN SPECIES	1424													PXYLP1 (ENSMLEG00000027609) #19	ZBTB38 (ENSMLEG00000028299) #20	RASA2 (ENSMLEG00000042557) #21	RNF7 (ENSMLEG00000036171) #22	GRK7 (ENSMLEG00000014710) #23	ATP1B3 (ENSMLEG00000007822) #24	TFDP2 (ENSMLEG00000028104) #26	ENSMLEG00000028511	GK5 (ENSMLEG00000036715) #27	ENSMLEG00000031334 #28
Sooty mangabey	MODERN SPECIES	656	ENSCATG00000008634	ENSCATG00000044414	COPB2 (ENSCATG00000038728)	RBP2 (ENSCATG00000002512)	RBP1 (ENSCATG00000018519) #13	NMNAT3 (ENSCATG00000031087) #14	CLSTN2 (ENSCATG00000036787) #15	ENSCATG00000045166	ENSCATG00000005820	TRIM42 (ENSCATG00000029341) #16	SLC25A36 (ENSCATG00000031849) #17	SPSB4 (ENSCATG00000038455) #18	PXYLP1 (ENSCATG00000036840) #19	ZBTB38 (ENSCATG00000005041) #20	RASA2 (ENSCATG00000033775) #21	RNF7 (ENSCATG00000042225) #22	GRK7 (ENSCATG00000018025) #23	ATP1B3 (ENSCATG00000040498) #24	TFDP2 (ENSCATG00000035711) #26	GK5 (ENSCATG00000033849) #27	ENSCATG00000031692	XRN1 (ENSCATG00000041794) #28	ATR (ENSCATG00000034316) #29	PLS1 (ENSCATG00000034817) #30	TRPC1 (ENSCATG00000034251) #31	PCOLCE2 (ENSCATG00000025595) #32	U2SURP (ENSCATG00000039024) #34	CHST2 (ENSCATG00000022686) #35	SLC9A9 (ENSCATG00000034835) #37	DIPK2A (ENSCATG00000042655)	ENSCATG00000034132
Macaca	ANCESTRAL SPECIES	5	ENSGT00910000147082	ENSGT00390000006095.s	ENSGT00900000141083.d	ENSGT00940000160165	ENSGT00940000159675 #13	ENSGT00950000183179.b.b #14	ENSGT00950000183086.a.a.b #15	ENSGT00910000147512	ENSGT00910000147447	ENSGT00530000064220 #16	ENSGT00940000154369.d #17	ENSGT01030000234629.C #18	ENSGT00390000016324 #19	ENSGT00940000161449 #20	ENSGT00940000158201 #21	ENSGT00940000155481.u.b #22	ENSGT00940000160511 #23	ENSGT01030000234579.A.b.x #24	ENSGT00940000157909 #26	ENSGT00510000046985.i	ENSGT01000000214434.A #27	ENSGT00670000098080 #28	ENSGT00940000155714 #29	ENSGT00950000183097.a.b #30	ENSGT01060000248594.f #31	ENSGT00940000157649 #32	ENSGT00940000162334 #33	ENSGT00390000010687.a.a #34	ENSGT00940000161292 #35	ENSGT00940000160094 #37	ENSGT00520000055625.b
Pig-tailed macaque	MODERN SPECIES	443	COPB2 (ENSMNEG00000039119)	RBP2 (ENSMNEG00000040865)	ENSMNEG00000039456	RBP1 (ENSMNEG00000042493) #13	NMNAT3 (ENSMNEG00000034277) #14	CLSTN2 (ENSMNEG00000038192) #15	ENSMNEG00000010088	ENSMNEG00000022589	TRIM42 (ENSMNEG00000045001) #16	SLC25A36 (ENSMNEG00000040083) #17	ENSMNEG00000042747	SPSB4 (ENSMNEG00000028739) #18	PXYLP1 (ENSMNEG00000041720) #19	RASA2 (ENSMNEG00000034452) #21	ENSMNEG00000039256	RNF7 (ENSMNEG00000027808) #22	GRK7 (ENSMNEG00000032651) #23	ATP1B3 (ENSMNEG00000035434) #24	TFDP2 (ENSMNEG00000039976) #26	ENSMNEG00000045190	GK5 (ENSMNEG00000038743) #27	XRN1 (ENSMNEG00000034217) #28	ATR (ENSMNEG00000006874) #29	PLS1 (ENSMNEG00000015383) #30	TRPC1 (ENSMNEG00000030705) #31	PCOLCE2 (ENSMNEG00000039023) #32	PAQR9 (ENSMNEG00000001542) #33	U2SURP (ENSMNEG00000034553) #34	CHST2 (ENSMNEG00000027882) #35	SLC9A9 (ENSMNEG00000039490) #37	DIPK2A (ENSMNEG00000026997)
Macaca_a	ANCESTRAL SPECIES	5	ENSGT00390000007772.a.d	ENSGT00910000147180	ENSGT00910000147082	ENSGT00390000006095.s	ENSGT00900000141083.d	ENSGT00940000160165	ENSGT00940000159675 #13	ENSGT00950000183179.b.b #14	ENSGT00950000183086.a.a.b #15	ENSGT00530000064220 #16	ENSGT00940000154369.d #17	ENSGT01030000234629.C #18	ENSGT00390000016324 #19	ENSGT00940000161449 #20	ENSGT00940000158201 #21	ENSGT00940000155481.u.b #22	ENSGT00940000160511 #23	ENSGT01030000234579.A.b.x #24	ENSGT00940000157909 #26	ENSGT01000000214434.A #27	ENSGT00670000098080 #28	ENSGT00940000155714 #29	ENSGT00950000183097.a.b #30	ENSGT01060000248594.f #31	ENSGT00940000157649 #32	ENSGT00940000162334 #33	ENSGT00390000010687.a.a #34	ENSGT00940000161292 #35	ENSGT00940000160094 #37	ENSGT00520000055625.b	ENSGT00390000015224.c.b.a
Crab-eating macaque	MODERN SPECIES	11	PRR23A (ENSMFAG00000064336)	ENSMFAG00000030211	ENSMFAG00000030216	MRPS22 (ENSMFAG00000035834)	COPB2 (ENSMFAG00000030752)	RBP2 (ENSMFAG00000039548)	RBP1 (ENSMFAG00000031658) #13	NMNAT3 (ENSMFAG00000044228) #14	CLSTN2 (ENSMFAG00000044664) #15	TRIM42 (ENSMFAG00000014452) #16	ENSMFAG00000031013 #17	ENSMFAG00000042001	PXYLP1 (ENSMFAG00000045625) #19	ZBTB38 (ENSMFAG00000021549) #20	ENSMFAG00000030557 #21	RNF7 (ENSMFAG00000051836) #22	GRK7 (ENSMFAG00000001701) #23	ATP1B3 (ENSMFAG00000040649) #24	TFDP2 (ENSMFAG00000040035) #26	GK5 (ENSMFAG00000039065) #27	XRN1 (ENSMFAG00000032599) #28	ATR (ENSMFAG00000001151) #29	ENSMFAG00000054854	PLS1 (ENSMFAG00000002207) #30	TRPC1 (ENSMFAG00000001111) #31	PCOLCE2 (ENSMFAG00000001242) #32	PAQR9 (ENSMFAG00000034764) #33	U2SURP (ENSMFAG00000031084) #34	ENSMFAG00000060513	CHST2 (ENSMFAG00000029983) #35	SLC9A9 (ENSMFAG00000002921) #37
Rhesus	MODERN SPECIES	11	FOXL2NB (ENSMMUG00000049225)	PRR23A (ENSMMUG00000050483)	PRR23C (ENSMMUG00000055295)	ENSMMUG00000054284	MRPS22 (ENSMMUG00000003048)	COPB2 (ENSMMUG00000003051)	RBP2 (ENSMMUG00000051934)	RBP1 (ENSMMUG00000000290) #14	CLSTN2 (ENSMMUG00000003169) #15	TRIM42 (ENSMMUG00000021392) #16	SLC25A36 (ENSMMUG00000022153) #17	SPSB4 (ENSMMUG00000053344) #18	PXYLP1 (ENSMMUG00000019697) #19	ZBTB38 (ENSMMUG00000031526) #20	RASA2 (ENSMMUG00000009418) #21	RNF7 (ENSMMUG00000006648) #22	GRK7 (ENSMMUG00000007387) #23	ATP1B3 (ENSMMUG00000060612) #24	TFDP2 (ENSMMUG00000011134) #26	GK5 (ENSMMUG00000012151) #27	ENSMMUG00000058668	XRN1 (ENSMMUG00000014038) #28	ATR (ENSMMUG00000007927) #29	PLS1 (ENSMMUG00000055990) #30	TRPC1 (ENSMMUG00000012405) #31	PCOLCE2 (ENSMMUG00000012406) #32	PAQR9 (ENSMMUG00000003927) #33	U2SURP (ENSMMUG00000002775) #34	CHST2 (ENSMMUG00000002779) #35	SLC9A9 (ENSMMUG00000009694) #37	ENSMMUG00000051153
Hominoidea	ANCESTRAL SPECIES	2	ENSGT00910000147082	ENSGT00390000006095	ENSGT00900000141083.d	ENSGT00940000160165	ENSGT00940000159675 #13	ENSGT00950000183179.b.b #14	ENSGT00950000183086.a.a.b #15	ENSGT00530000064220 #16	ENSGT00940000154369.d #17	ENSGT01030000234629.C #18	ENSGT00390000016324 #19	ENSGT00940000161449 #20	ENSGT00940000158201 #21	ENSGT00940000155481.v #22	ENSGT01090000260040.b.b.b.b.a.a.a.a	ENSGT00940000155481.u.b #22	ENSGT00940000160511 #23	ENSGT01030000234579.A.b.x #24	ENSGT00940000157909 #26	ENSGT01000000214434.A #27	ENSGT00670000098080 #28	ENSGT00940000155714 #29	ENSGT00950000183097.a.b #30	ENSGT01060000248594.f #31	ENSGT00940000157649 #32	ENSGT00940000162334 #33	ENSGT00390000010687.a.a #34	ENSGT00940000161292 #35	ENSGT00940000160094 #37	ENSGT00520000055625.b	ENSGT01030000234558.A.a.b
Hominidae	ANCESTRAL SPECIES	2	ENSGT00910000147082	ENSGT00390000006095	ENSGT00900000141083.d	ENSGT00940000160165	ENSGT00940000159675 #13	ENSGT00950000183179.b.b #14	ENSGT00950000183086.a.a.b #15	ENSGT00530000064220 #16	ENSGT00940000154369.d #17	ENSGT01030000234629.C #18	ENSGT00390000016324 #19	ENSGT00940000161449 #20	ENSGT00940000158201 #21	ENSGT00940000155481.v #22	ENSGT01090000260040.b.b.b.b.a.a.a.a	ENSGT00940000155481.u.b #22	ENSGT00940000160511 #23	ENSGT01030000234579.A.b.x.a #24	ENSGT00940000157909 #26	ENSGT01000000214434.A #27	ENSGT00670000098080 #28	ENSGT00940000155714 #29	ENSGT00950000183097.a.b #30	ENSGT01060000248594.f #31	ENSGT00940000157649 #32	ENSGT00940000162334 #33	ENSGT00390000010687.a.a #34	ENSGT00940000161292 #35	ENSGT00940000160094 #37	ENSGT00520000055625.b	ENSGT00910000147832
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	2	ENSGT00910000147180	ENSGT00910000147082	ENSGT00390000006095	ENSGT00900000141083.d	ENSGT00940000160165	ENSGT00940000159675 #13	ENSGT00950000183179.b.b #14	ENSGT00950000183086.a.a.b #15	ENSGT00530000064220 #16	ENSGT00940000154369.d #17	ENSGT01030000234629.C #18	ENSGT00390000016324 #19	ENSGT00940000161449 #20	ENSGT00940000158201 #21	ENSGT01090000260040.b.b.b.b.a.a.a.a	ENSGT00940000155481.u.b #22	ENSGT00940000160511 #23	ENSGT01030000234579.A.b.x.a.a #24	ENSGT00940000157909 #26	ENSGT01000000214434.A #27	ENSGT00670000098080 #28	ENSGT00940000155714 #29	ENSGT00950000183097.a.b #30	ENSGT01060000248594.f #31	ENSGT00940000157649 #32	ENSGT00940000162334 #33	ENSGT00390000010687.a.a #34	ENSGT00940000161292 #35	ENSGT00940000160094 #37	ENSGT00520000055625.b	ENSGT00910000147832
Homo/Pan group	ANCESTRAL SPECIES	3	ENSGT00910000147180	ENSGT00910000147082	ENSGT00390000006095	ENSGT00900000141083.d	ENSGT00940000160165	ENSGT00940000159675 #13	ENSGT00950000183179.b.b #14	ENSGT00950000183086.a.a.b #15	ENSGT00530000064220 #16	ENSGT00940000154369.d #17	ENSGT01030000234629.C #18	ENSGT00390000016324 #19	ENSGT00940000161449 #20	ENSGT00940000158201 #21	ENSGT01090000260040.b.b.b.b.a.a.a.a	ENSGT00940000155481.u.b #22	ENSGT00940000160511 #23	ENSGT01030000234579.A.b.x.a.a #24	ENSGT00940000157909 #26	ENSGT01000000214434.A #27	ENSGT00670000098080 #28	ENSGT00940000155714 #29	ENSGT00950000183097.a.b #30	ENSGT01060000248594.f #31	ENSGT00940000157649 #32	ENSGT00940000162334 #33	ENSGT00390000010687.a.a #34	ENSGT00940000161292 #35	ENSGT00940000160094 #37	ENSGT00520000055625.b	ENSGT00910000147832
Pan	ANCESTRAL SPECIES	2	ENSGT00910000147082	ENSGT00390000006095	ENSGT00900000141083.d	ENSGT00940000160165	ENSGT00940000159675 #13	ENSGT00950000183179.b.b #14	ENSGT00950000183086.a.a.b #15	ENSGT00910000147512	ENSGT00530000064220 #16	ENSGT00940000154369.d #17	ENSGT01030000234629.C #18	ENSGT00390000016324 #19	ENSGT00940000161449 #20	ENSGT00940000158201 #21	ENSGT01090000260040.b.b.b.b.a.a.a.a	ENSGT00940000155481.u.b #22	ENSGT00940000160511 #23	ENSGT01030000234579.A.b.x.a.a #24	ENSGT00940000157909 #26	ENSGT01000000214434.A #27	ENSGT00670000098080 #28	ENSGT00940000155714 #29	ENSGT00950000183097.a.b #30	ENSGT01060000248594.f #31	ENSGT00940000157649 #32	ENSGT00940000162334 #33	ENSGT00390000010687.a.a #34	ENSGT00940000161292 #35	ENSGT00940000160094 #37	ENSGT00390000001347.vb.a.b.a.c.b	ENSGT00520000055625.b
Chimpanzee	MODERN SPECIES	16	MRPS22 (ENSPTRG00000015458)	COPB2 (ENSPTRG00000015459)	RBP2 (ENSPTRG00000015460)	RBP1 (ENSPTRG00000015461) #13	NMNAT3 (ENSPTRG00000015462) #14	ENSPTRG00000045045	CLSTN2 (ENSPTRG00000015463) #15	ENSPTRG00000044651	TRIM42 (ENSPTRG00000015465) #16	SLC25A36 (ENSPTRG00000015467) #17	SPSB4 (ENSPTRG00000015468) #18	PXYLP1 (ENSPTRG00000015469) #19	ZBTB38 (ENSPTRG00000030108) #20	RASA2 (ENSPTRG00000015472) #21	ENSPTRG00000046551	RNF7 (ENSPTRG00000039248) #22	GRK7 (ENSPTRG00000052431) #23	ATP1B3 (ENSPTRG00000015476) #24	TFDP2 (ENSPTRG00000015479) #26	GK5 (ENSPTRG00000015480) #27	XRN1 (ENSPTRG00000015482) #28	ATR (ENSPTRG00000015483) #29	PLS1 (ENSPTRG00000015484) #30	TRPC1 (ENSPTRG00000015485) #31	PCOLCE2 (ENSPTRG00000015486) #32	PAQR9 (ENSPTRG00000015488) #33	U2SURP (ENSPTRG00000015489) #34	CHST2 (ENSPTRG00000043559) #35	SLC9A9 (ENSPTRG00000015491) #37	ENSPTRG00000046723	DIPK2A (ENSPTRG00000015492)
Bonobo	MODERN SPECIES	16	ENSPPAG00000027270	MRPS22 (ENSPPAG00000025143)	COPB2 (ENSPPAG00000035821)	RBP2 (ENSPPAG00000031530)	RBP1 (ENSPPAG00000027809) #13	ENSPPAG00000038038 #14	ENSPPAG00000044006	CLSTN2 (ENSPPAG00000036614) #15	ENSPPAG00000041953	TRIM42 (ENSPPAG00000028240) #16	SLC25A36 (ENSPPAG00000030739) #17	SPSB4 (ENSPPAG00000029910) #18	PXYLP1 (ENSPPAG00000030848) #19	RASA2 (ENSPPAG00000036725) #21	ENSPPAG00000042586	RNF7 (ENSPPAG00000036147) #22	GRK7 (ENSPPAG00000037494) #23	ENSPPAG00000038971 #24	TFDP2 (ENSPPAG00000031311) #26	GK5 (ENSPPAG00000041760) #27	XRN1 (ENSPPAG00000010180) #28	ATR (ENSPPAG00000042807) #29	PLS1 (ENSPPAG00000042289) #30	TRPC1 (ENSPPAG00000004252) #31	PCOLCE2 (ENSPPAG00000029354) #32	PAQR9 (ENSPPAG00000009521) #33	ENSPPAG00000027945 #34	SLC9A9 (ENSPPAG00000040325) #37	ENSPPAG00000029017	DIPK2A (ENSPPAG00000032010)	ENSPPAG00000002254
Human	MODERN SPECIES	15	PRR23A (ENSG00000206260)	MRPS22 (ENSG00000175110)	PRR23B (ENSG00000184814)	PRR23C (ENSG00000233701)	COPB2 (ENSG00000184432)	RBP2 (ENSG00000114113)	RBP1 (ENSG00000114115) #13	NMNAT3 (ENSG00000163864) #14	CLSTN2 (ENSG00000158258) #15	TRIM42 (ENSG00000155890) #16	SLC25A36 (ENSG00000114120) #17	SPSB4 (ENSG00000175093) #18	PXYLP1 (ENSG00000155893) #19	ZBTB38 (ENSG00000177311) #20	RASA2 (ENSG00000155903) #21	RNF7 (ENSG00000114125) #22	GRK7 (ENSG00000114124) #23	ATP1B3 (ENSG00000069849) #24	TFDP2 (ENSG00000114126) #26	GK5 (ENSG00000175066) #27	XRN1 (ENSG00000114127) #28	ATR (ENSG00000175054) #29	PLS1 (ENSG00000120756) #30	TRPC1 (ENSG00000144935) #31	PCOLCE2 (ENSG00000163710) #32	PAQR9 (ENSG00000188582) #33	U2SURP (ENSG00000163714) #34	CHST2 (ENSG00000175040) #35	SLC9A9 (ENSG00000181804) #37	DIPK2A (ENSG00000181744)	PLOD2 (ENSG00000152952)
Gorilla	MODERN SPECIES	16	PRR23C (ENSGGOG00000043485)	MRPS22 (ENSGGOG00000014871)	ENSGGOG00000039588	ENSGGOG00000005780	RBP2 (ENSGGOG00000010274)	RBP1 (ENSGGOG00000012301) #13	NMNAT3 (ENSGGOG00000012306) #14	ENSGGOG00000014226	CLSTN2 (ENSGGOG00000007929) #15	TRIM42 (ENSGGOG00000010587) #16	SLC25A36 (ENSGGOG00000024554) #17	SPSB4 (ENSGGOG00000011522) #18	PXYLP1 (ENSGGOG00000001732) #19	RASA2 (ENSGGOG00000023738) #21	ENSGGOG00000037216	RNF7 (ENSGGOG00000001829) #22	GRK7 (ENSGGOG00000013256) #23	ATP1B3 (ENSGGOG00000027111) #24	TFDP2 (ENSGGOG00000007878) #26	GK5 (ENSGGOG00000003657) #27	XRN1 (ENSGGOG00000008047) #28	ATR (ENSGGOG00000008083) #29	PLS1 (ENSGGOG00000002849) #30	TRPC1 (ENSGGOG00000026926) #31	PCOLCE2 (ENSGGOG00000007872) #32	U2SURP (ENSGGOG00000005563) #34	CHST2 (ENSGGOG00000010984) #35	SLC9A9 (ENSGGOG00000034866) #37	ENSGGOG00000042026	DIPK2A (ENSGGOG00000015140)	ENSGGOG00000042601
Gibbon	MODERN SPECIES	23	RBP2 (ENSNLEG00000004446)	RBP1 (ENSNLEG00000004461) #13	ENSNLEG00000030080	NMNAT3 (ENSNLEG00000004471) #14	CLSTN2 (ENSNLEG00000004476) #15	ENSNLEG00000034232	TRIM42 (ENSNLEG00000004507) #16	SLC25A36 (ENSNLEG00000004520) #17	SPSB4 (ENSNLEG00000004536) #18	ENSNLEG00000033738	ENSNLEG00000034016	PXYLP1 (ENSNLEG00000004544) #19	ZBTB38 (ENSNLEG00000004569) #20	ENSNLEG00000036178	RASA2 (ENSNLEG00000004575) #21	RNF7 (ENSNLEG00000033882) #22	GRK7 (ENSNLEG00000004658) #23	ENSNLEG00000018218	ENSNLEG00000027455	ENSNLEG00000035658	TFDP2 (ENSNLEG00000031256) #26	GK5 (ENSNLEG00000004695) #27	XRN1 (ENSNLEG00000004726) #28	ATR (ENSNLEG00000004792) #29	PLS1 (ENSNLEG00000004830) #30	TRPC1 (ENSNLEG00000004868) #31	ENSNLEG00000035106	PCOLCE2 (ENSNLEG00000004883) #32	U2SURP (ENSNLEG00000004915) #34	CHST2 (ENSNLEG00000004976) #35	ENSNLEG00000005029
Platyrrhini	ANCESTRAL SPECIES																	ENSGT00940000155481.u.b #22
Cebidae	ANCESTRAL SPECIES																	ENSGT00940000155481.u.b #22
Marmoset	MODERN SPECIES		ENSCJAG00000082521	ENSCJAG00000080026	TTLL1 (ENSCJAG00000009758)	PACSIN2 (ENSCJAG00000009771)	ARFGAP3 (ENSCJAG00000009816)	A4GALT (ENSCJAG00000022137)	CYB5R3 (ENSCJAG00000009596)	POLDIP3 (ENSCJAG00000009628)	RRP7A (ENSCJAG00000009668)	SERHL2 (ENSCJAG00000081818)	ENSCJAG00000084345	ENSCJAG00000006644	TCF20 (ENSCJAG00000002308)	ENSCJAG00000037046	CYP2D19 (ENSCJAG00000002321)	ENSCJAG00000033546 #22	NDUFA6 (ENSCJAG00000074627)	SMDT1 (ENSCJAG00000002333)	PHETA2 (ENSCJAG00000002334)	NAGA (ENSCJAG00000002338)	WBP2NL (ENSCJAG00000002344)	SEPTIN3 (ENSCJAG00000043636)	SMIM45 (ENSCJAG00000044184)	CENPM (ENSCJAG00000002359)	TNFRSF13C (ENSCJAG00000002372)	SHISA8 (ENSCJAG00000014945)	SREBF2 (ENSCJAG00000002378)	CCDC134 (ENSCJAG00000002415)	MEI1 (ENSCJAG00000002425)	SNU13 (ENSCJAG00000070172)	ENSCJAG00000045512
Simiiformes	ANCESTRAL SPECIES																	ENSGT00940000155481.v #22
Catarrhini	ANCESTRAL SPECIES	2	ENSGT00390000007772.a.d	ENSGT00910000147180	ENSGT00910000147082	ENSGT00390000006095	ENSGT00900000141083.d	ENSGT00940000160165	ENSGT00940000159675 #13	ENSGT00950000183179.b.b #14	ENSGT00950000183086.a.a.b #15	ENSGT00530000064220 #16	ENSGT00940000154369.d #17	ENSGT01030000234629.C #18	ENSGT00390000016324 #19	ENSGT00940000161449 #20	ENSGT00940000158201 #21	ENSGT00940000155481.v #22	ENSGT01090000260040.b.b.b.b.a.a.a.a	ENSGT00940000155481.u.b #22	ENSGT00940000160511 #23	ENSGT01030000234579.A.b.x #24	ENSGT00940000157909 #26	ENSGT01000000214434.A #27	ENSGT00670000098080 #28	ENSGT00940000155714 #29	ENSGT00950000183097.a.b #30	ENSGT01060000248594.f #31	ENSGT00940000157649 #32	ENSGT00940000162334 #33	ENSGT00390000010687.a.a #34	ENSGT00940000161292 #35	ENSGT00940000160094 #37
Hominoidea	ANCESTRAL SPECIES	2	ENSGT00390000007772.a.d	ENSGT00910000147180	ENSGT00910000147082	ENSGT00390000006095	ENSGT00900000141083.d	ENSGT00940000160165	ENSGT00940000159675 #13	ENSGT00950000183179.b.b #14	ENSGT00950000183086.a.a.b #15	ENSGT00530000064220 #16	ENSGT00940000154369.d #17	ENSGT01030000234629.C #18	ENSGT00390000016324 #19	ENSGT00940000161449 #20	ENSGT00940000158201 #21	ENSGT00940000155481.v #22	ENSGT01090000260040.b.b.b.b.a.a.a.a	ENSGT00940000155481.u.b #22	ENSGT00940000160511 #23	ENSGT01030000234579.A.b.x #24	ENSGT00940000157909 #26	ENSGT01000000214434.A #27	ENSGT00670000098080 #28	ENSGT00940000155714 #29	ENSGT00950000183097.a.b #30	ENSGT01060000248594.f #31	ENSGT00940000157649 #32	ENSGT00940000162334 #33	ENSGT00390000010687.a.a #34	ENSGT00940000161292 #35	ENSGT00940000160094 #37
Hominidae	ANCESTRAL SPECIES	2	ENSGT00390000007772.a.d	ENSGT00910000147180	ENSGT00910000147082	ENSGT00390000006095	ENSGT00900000141083.d	ENSGT00940000160165	ENSGT00940000159675 #13	ENSGT00950000183179.b.b #14	ENSGT00950000183086.a.a.b #15	ENSGT00530000064220 #16	ENSGT00940000154369.d #17	ENSGT01030000234629.C #18	ENSGT00390000016324 #19	ENSGT00940000161449 #20	ENSGT00940000158201 #21	ENSGT00940000155481.v #22	ENSGT01090000260040.b.b.b.b.a.a.a.a	ENSGT00940000155481.u.b #22	ENSGT00940000160511 #23	ENSGT01030000234579.A.b.x.a #24	ENSGT00940000157909 #26	ENSGT01000000214434.A #27	ENSGT00670000098080 #28	ENSGT00940000155714 #29	ENSGT00950000183097.a.b #30	ENSGT01060000248594.f #31	ENSGT00940000157649 #32	ENSGT00940000162334 #33	ENSGT00390000010687.a.a #34	ENSGT00940000161292 #35	ENSGT00940000160094 #37
Orangutan	MODERN SPECIES	16	PRR23B (ENSPPYG00000014152)	PRR23C (ENSPPYG00000014153)	MRPS22 (ENSPPYG00000036169)	COPB2 (ENSPPYG00000014155)	RBP2 (ENSPPYG00000014156)	RBP1 (ENSPPYG00000014157) #13	ENSPPYG00000014158 #14	CLSTN2 (ENSPPYG00000014159) #15	TRIM42 (ENSPPYG00000014160) #16	SLC25A36 (ENSPPYG00000040461) #17	SPSB4 (ENSPPYG00000014162) #18	PXYLP1 (ENSPPYG00000014163) #19	ZBTB38 (ENSPPYG00000031145) #20	ENSPPYG00000040016	RASA2 (ENSPPYG00000014165) #21	ENSPPYG00000031196 #22	GRK7 (ENSPPYG00000014168) #23	ENSPPYG00000033921	ATP1B3 (ENSPPYG00000014169) #24	TFDP2 (ENSPPYG00000014170) #26	GK5 (ENSPPYG00000014171) #27	XRN1 (ENSPPYG00000014172) #28	ATR (ENSPPYG00000014173) #29	PLS1 (ENSPPYG00000014174) #30	TRPC1 (ENSPPYG00000014175) #31	ENSPPYG00000014176 #32	PAQR9 (ENSPPYG00000014177) #33	U2SURP (ENSPPYG00000014178) #34	CHST2 (ENSPPYG00000014179) #35	SLC9A9 (ENSPPYG00000014180) #37	ENSPPYG00000039260
Gibbon	MODERN SPECIES	6	HEY1 (ENSNLEG00000030175)	ENSNLEG00000034481	ENSNLEG00000002256	ENSNLEG00000034160	ENSNLEG00000035176	ZBTB10 (ENSNLEG00000002387)	ENSNLEG00000032396	ZNF704 (ENSNLEG00000002414)	PAG1 (ENSNLEG00000002436)	ENSNLEG00000035421	PMP2 (ENSNLEG00000002468)	FABP9 (ENSNLEG00000002486)	FABP4 (ENSNLEG00000002499)	ENSNLEG00000031941	FABP12 (ENSNLEG00000002515)	ENSNLEG00000035358 #22	ENSNLEG00000033082	IMPA1 (ENSNLEG00000002540)	SLC10A5 (ENSNLEG00000018239)	ZFAND1 (ENSNLEG00000031659)	CHMP4C (ENSNLEG00000002649)	SNX16 (ENSNLEG00000002659)	RALYL (ENSNLEG00000002702)	LRRCC1 (ENSNLEG00000002703)	E2F5 (ENSNLEG00000002804)	ENSNLEG00000034790	CA13 (ENSNLEG00000002848)	CA1 (ENSNLEG00000002863)	CA3 (ENSNLEG00000002904)	CA2 (ENSNLEG00000002943)	ENSNLEG00000028224
Euarchontoglires_A	ANCESTRAL SPECIES	2	ENSGT00940000157522	ENSGT00940000162075	ENSGT00390000007772	ENSGT00390000006095	ENSGT00900000141083.d	ENSGT00940000160165	ENSGT00940000159675 #13	ENSGT00950000183179.b.b #14	ENSGT00950000183086.a.a.b #15	ENSGT00530000064220 #16	ENSGT00940000154369.d #17	ENSGT01030000234629.C #18	ENSGT00390000016324 #19	ENSGT00940000161449 #20	ENSGT00940000158201 #21	ENSGT00940000155481 #22	ENSGT00940000160511 #23	ENSGT01030000234579.A.b #24	ENSGT00940000157909 #26	ENSGT01000000214434.A #27	ENSGT00670000098080 #28	ENSGT00940000155714 #29	ENSGT00950000183097.a.b #30	ENSGT01060000248594.f #31	ENSGT00940000157649 #32	ENSGT00940000162334 #33	ENSGT00390000010687.a.a #34	ENSGT00940000161292 #35	ENSGT00940000160094 #37	ENSGT00520000055625.b	ENSGT01030000234558.A.a.b
Tree shrew	MODERN SPECIES	2740															RASA2 (ENSTBEG00000001103) #21	RNF7 (ENSTBEG00000002917) #22
Glires	ANCESTRAL SPECIES	2	ENSGT00940000157522	ENSGT00940000162075	ENSGT00390000007772	ENSGT00390000006095	ENSGT00900000141083.d	ENSGT00940000160165	ENSGT00940000159675 #13	ENSGT00950000183179.b.b #14	ENSGT00950000183086.a.a.b #15	ENSGT00530000064220 #16	ENSGT00940000154369.d #17	ENSGT01030000234629.C #18	ENSGT00390000016324 #19	ENSGT00940000161449 #20	ENSGT00940000158201 #21	ENSGT00940000155481 #22	ENSGT00940000160511 #23	ENSGT01030000234579.A.b #24	ENSGT00940000157909.j #26	ENSGT01000000214434.A #27	ENSGT00670000098080 #28	ENSGT00940000155714 #29	ENSGT00950000183097.a.b #30	ENSGT01060000248594.f #31	ENSGT00940000157649 #32	ENSGT00940000162334 #33	ENSGT00390000010687.a.a #34	ENSGT00940000161292 #35	ENSGT00940000160094 #37	ENSGT00520000055625.b	ENSGT01030000234558.A.a.b
Lagomorpha	ANCESTRAL SPECIES	6	ENSGT00390000007364	ENSGT00940000157522	ENSGT00390000007772	ENSGT00390000006095	ENSGT00900000141083.d	ENSGT00940000160165	ENSGT00940000159675 #13	ENSGT00950000183179.b.b #14	ENSGT00950000183086.a.a.b #15	ENSGT00530000064220 #16	ENSGT00940000154369.c.a ##17	ENSGT01030000234629.C #18	ENSGT00390000016324 #19	ENSGT00940000161449 #20	ENSGT00940000158201 #21	ENSGT00940000155481 #22	ENSGT00940000160511 #23	ENSGT01030000234579.A.b #24	ENSGT00940000157909.i.a #26	ENSGT01000000214434.A #27	ENSGT00670000098080 #28	ENSGT00940000155714 #29	ENSGT00950000183097.a.b #30	ENSGT01060000248594.f #31	ENSGT00940000157649 #32	ENSGT00940000162334 #33	ENSGT00390000010687.a.a #34	ENSGT00940000161292 #35	ENSGT00940000160094 #37	ENSGT00520000055625.b	ENSGT01030000234558.A.a.b
Pika	MODERN SPECIES	359																ENSOPRG00000008458 #22	ENSOPRG00000008466 #23	ENSOPRG00000008476 #24
Rodentia	ANCESTRAL SPECIES	2	ENSGT00940000162075	ENSGT00390000007772	ENSGT00390000006095	ENSGT00900000141083.d	ENSGT00940000160165	ENSGT00940000159675 #13	ENSGT00950000183179.b.b #14	ENSGT00950000183086.a.a.b #15	ENSGT00530000064220 #16	ENSGT00940000154369.d #17	ENSGT01030000234629.C #18	ENSGT00390000016324 #19	ENSGT00940000161449 #20	ENSGT00940000158201 #21	ENSGT00530000068221	ENSGT00940000155481 #22	ENSGT00940000160511 #23	ENSGT01030000234579.A.b #24	ENSGT00940000157909.j #26	ENSGT01000000214434.A #27	ENSGT00670000098080 #28	ENSGT00940000155714 #29	ENSGT00950000183097.a.b #30	ENSGT01060000248594.f #31	ENSGT00940000157649 #32	ENSGT00940000162334 #33	ENSGT00390000010687.a.a #34	ENSGT00940000161292 #35	ENSGT00940000160094 #37	ENSGT00520000055625.b	ENSGT01030000234558.A.a.b
Rodentia_A	ANCESTRAL SPECIES	5	ENSGT00940000162075	ENSGT00390000007772	ENSGT00390000006095	ENSGT00900000141083.d	ENSGT00940000160165	ENSGT00940000159675 #13	ENSGT00950000183179.b.b #14	ENSGT00950000183086.a.a.b #15	ENSGT00530000064220 #16	ENSGT00940000154369.d #17	ENSGT01030000234629.C #18	ENSGT00390000016324 #19	ENSGT00940000161449 #20	ENSGT00940000158201 #21	ENSGT00530000068221	ENSGT00940000155481 #22	ENSGT00940000160511 #23	ENSGT01030000234579.A.b #24	ENSGT00940000157909.j #26	ENSGT01000000214434.A #27	ENSGT00670000098080 #28	ENSGT00940000155714 #29	ENSGT00950000183097.a.b #30	ENSGT01060000248594.f #31	ENSGT00940000157649 #32	ENSGT00940000162334 #33	ENSGT00390000010687.a.a #34	ENSGT00940000161292 #35	ENSGT00940000160094 #37	ENSGT00520000055625.b	ENSGT01030000234558.A.a.b
Hystricomorpha	ANCESTRAL SPECIES	6	ENSGT00940000162075	ENSGT00390000007772	ENSGT00390000006095	ENSGT00900000141083.d	ENSGT00940000160165	ENSGT00940000159675 #13	ENSGT00950000183179.b.b #14	ENSGT00950000183086.a.a.b #15	ENSGT00530000064220 #16	ENSGT00940000154369.d #17	ENSGT01030000234629.C #18	ENSGT00390000016324 #19	ENSGT00940000161449 #20	ENSGT00940000158201 #21	ENSGT00530000068221	ENSGT00940000155481 #22	ENSGT00940000160511 #23	ENSGT01030000234579.A.b #24	ENSGT00940000157909.j #26	ENSGT01000000214434.A #27	ENSGT00670000098080 #28	ENSGT00940000155714 #29	ENSGT00950000183097.a.b #30	ENSGT01060000248594.f #31	ENSGT00940000157649 #32	ENSGT00940000162334 #33	ENSGT00390000010687.a.a #34	ENSGT00940000161292 #35	ENSGT00940000160094 #37	ENSGT00520000055625.b	ENSGT01030000234558.A.a.b
Naked mole-rat female	DUPLICATION
Naked mole-rat female	MODERN SPECIES	27	ENSHGLG00000012202 ##17	NMNAT3 (ENSHGLG00000012035) #14	ENSHGLG00000012472 #15	ENSHGLG00000044512	ENSHGLG00000020964	ENSHGLG00000049519	ENSHGLG00000013325 #16	ENSHGLG00000041508	ENSHGLG00000045813 #17	ENSHGLG00000021114	SPSB4 (ENSHGLG00000013816) #18	ENSHGLG00000014428	PXYLP1 (ENSHGLG00000014087) #19	ZBTB38 (ENSHGLG00000011669) #20	RASA2 (ENSHGLG00000012050) #21	RNF7 (ENSHGLG00000038279) #22	ENSHGLG00000033069	GRK7 (ENSHGLG00000012629) #23	ENSHGLG00000012755 #24	TFDP2 (ENSHGLG00000013441) #26	ENSHGLG00000033455	GK5 (ENSHGLG00000014374) #27	XRN1 (ENSHGLG00000014476) #28	ATR (ENSHGLG00000016875) #29	TRPC1 (ENSHGLG00000017039) #31	ENSHGLG00000048356	PCOLCE2 (ENSHGLG00000017054) #32	PAQR9 (ENSHGLG00000017213) #33	U2SURP (ENSHGLG00000017227) #34	CHST2 (ENSHGLG00000041521) #35	ENSHGLG00000018200 #37
Naked mole-rat female	MODERN SPECIES	21	ENSHGLG00000037909	CRX (ENSHGLG00000013944)	ENSHGLG00000048960	ENSHGLG00000034800	SULT2A1 (ENSHGLG00000013462)	ENSHGLG00000018150	ENSHGLG00000015622	ELSPBP1 (ENSHGLG00000015441)	ENSHGLG00000015393	PLA2G4C (ENSHGLG00000015361)	LIG1 (ENSHGLG00000015327)	ZSWIM9 (ENSHGLG00000015496)	ENSHGLG00000014014	ENSHGLG00000012468	ENSHGLG00000045839	ENSHGLG00000020793 #22	ENSHGLG00000044217	EMP3 (ENSHGLG00000009701)	TMEM143 (ENSHGLG00000016372)	SYNGR4 (ENSHGLG00000016321)	KDELR1 (ENSHGLG00000032231)	GRIN2D (ENSHGLG00000010637)	GRWD1 (ENSHGLG00000009547)	KCNJ14 (ENSHGLG00000050995)	CYTH2 (ENSHGLG00000008501)	ENSHGLG00000041839	SULT2B1 (ENSHGLG00000005796)	FAM83E (ENSHGLG00000005067)	SPACA4 (ENSHGLG00000033285)	ENSHGLG00000016158	SPHK2 (ENSHGLG00000016115)
Hystricomorpha_a	ANCESTRAL SPECIES	4	ENSGT00940000157522	ENSGT00940000162075	ENSGT00390000006095	ENSGT00900000141083.d	ENSGT00940000160165	ENSGT00940000159675 #13	ENSGT00950000183179.b.b #14	ENSGT00950000183086.a.a.b #15	ENSGT00530000064220 #16	ENSGT00940000154369.d.u #17	ENSGT01030000234629.C #18	ENSGT00390000016324 #19	ENSGT00940000161449 #20	ENSGT00940000158201 #21	ENSGT00530000068221	ENSGT00940000155481 #22	ENSGT00940000160511 #23	ENSGT01030000234579.A.b #24	ENSGT00940000157909.j #26	ENSGT01000000214434.A #27	ENSGT00670000098080 #28	ENSGT00940000155714 #29	ENSGT00950000183097.a.b #30	ENSGT01060000248594.f #31	ENSGT00940000157649 #32	ENSGT00940000162334 #33	ENSGT00390000010687.a.a #34	ENSGT00940000161292 #35	ENSGT00940000160094 #37	ENSGT00520000055625.b	ENSGT01030000234558.A.a.b
Hystricomorpha_b	ANCESTRAL SPECIES	45	ENSGT00940000157522	ENSGT00940000162075	ENSGT00390000006095	ENSGT00900000141083.d	ENSGT00940000160165	ENSGT00940000159675 #13	ENSGT00950000183179.b.b #14	ENSGT00950000183086.a.a.b #15	ENSGT00530000064220 #16	ENSGT00940000154369.d.u #17	ENSGT01030000234629.C #18	ENSGT00390000016324 #19	ENSGT00940000161449 #20	ENSGT00940000158201 #21	ENSGT00530000068221	ENSGT00940000155481 #22	ENSGT00940000160511 #23	ENSGT01030000234579.A.b #24	ENSGT00940000157909.j #26	ENSGT01000000214434.A #27	ENSGT00670000098080 #28	ENSGT00940000155714 #29	ENSGT00950000183097.a.b #30	ENSGT01060000248594.f #31	ENSGT00940000157649 #32	ENSGT00940000162334 #33	ENSGT00390000010687.a.a #34	ENSGT00940000161292 #35	ENSGT00940000160094 #37	ENSGT00520000055625.b	ENSGT01030000234558.A.a.b
Degu	DUPLICATION
Degu	DUPLICATION
Degu	MODERN SPECIES	203	PTCD3 (ENSODEG00000003461)	POLR1A (ENSODEG00000003542)	ENSODEG00000018941	ST3GAL5 (ENSODEG00000003647)	ATOH8 (ENSODEG00000003670)	SFTPB (ENSODEG00000003695)	USP39 (ENSODEG00000003717)	C2orf68 (ENSODEG00000003734)	TMEM150A (ENSODEG00000003753)	RNF181 (ENSODEG00000003046)	VAMP5 (ENSODEG00000003093)	VAMP8 (ENSODEG00000003107)	GGCX (ENSODEG00000003141)	ENSODEG00000003186	SH2D6 (ENSODEG00000003239)	ENSODEG00000018929 #22	CAPG (ENSODEG00000003321)	ELMOD3 (ENSODEG00000003393)	RETSAT (ENSODEG00000003469)	TCF7L1 (ENSODEG00000003559)	ENSODEG00000003586	ENSODEG00000003596	DNAH6 (ENSODEG00000003756)	SUCLG1 (ENSODEG00000002195)	ENSODEG00000002212	ENSODEG00000002222
Degu	MODERN SPECIES	69						TRIM42 (ENSODEG00000009982) #16	ENSODEG00000009644 ##17	SPSB4 (ENSODEG00000010189) #18	PXYLP1 (ENSODEG00000009182) #19	ENSODEG00000019578	ENSODEG00000019641	ZBTB38 (ENSODEG00000010676) #20	ENSODEG00000009714	RASA2 (ENSODEG00000008895) #21	ENSODEG00000010594	ENSODEG00000010015 #22	ENSODEG00000009611	ENSODEG00000010281	GRK7 (ENSODEG00000009406) #23	ENSODEG00000010038 #24	TFDP2 (ENSODEG00000009381) #26	GK5 (ENSODEG00000009274) #27	ENSODEG00000009043	ENSODEG00000008804 #28	ATR (ENSODEG00000011542) #29	ENSODEG00000019858	PLS1 (ENSODEG00000011164) #30	TRPC1 (ENSODEG00000010221) #31	PCOLCE2 (ENSODEG00000009524) #32	PAQR9 (ENSODEG00000019884) #33	U2SURP (ENSODEG00000008767) #34
Degu	MODERN SPECIES	49	ENSODEG00000018283	ADCY2 (ENSODEG00000018279)	FASTKD3 (ENSODEG00000018378)	ENSODEG00000018330	SEMA5A (ENSODEG00000018380)	ENSODEG00000018296	ATPSCKMT (ENSODEG00000018372)	ENSODEG00000018260	CMBL (ENSODEG00000018386)	ENSODEG00000018315	MARCHF6 (ENSODEG00000018354)	ROPN1L (ENSODEG00000018356)	ANKRD33B (ENSODEG00000018446)	DAP (ENSODEG00000018321)	CTNND2 (ENSODEG00000018402)	ENSODEG00000018270 #22
Guinea pig	MODERN SPECIES	8	PIK3CB (ENSCPOG00000000884)	ENSCPOG00000038087	MRPS22 (ENSCPOG00000034779)	COPB2 (ENSCPOG00000014668)	RBP2 (ENSCPOG00000004129)	RBP1 (ENSCPOG00000033535) #13	NMNAT3 (ENSCPOG00000034365) #14	CLSTN2 (ENSCPOG00000003011) #15	TRIM42 (ENSCPOG00000012108) #16	SLC25A36 (ENSCPOG00000019810) #17	SPSB4 (ENSCPOG00000033038) #18	PXYLP1 (ENSCPOG00000035466) #19	ZBTB38 (ENSCPOG00000033797) #20	RASA2 (ENSCPOG00000014013) #21	ENSCPOG00000032259	RNF7 (ENSCPOG00000036031) #22	GRK7 (ENSCPOG00000013262) #23	ENSCPOG00000003739 #24	TFDP2 (ENSCPOG00000013203) #26	GK5 (ENSCPOG00000004732) #27	ENSCPOG00000003458 #28	ENSCPOG00000035199 #28	ATR (ENSCPOG00000007001) #29	PLS1 (ENSCPOG00000003196) #30	TRPC1 (ENSCPOG00000003198) #31	PCOLCE2 (ENSCPOG00000009999) #32	PAQR9 (ENSCPOG00000021386) #33	U2SURP (ENSCPOG00000011656) #34	CHST2 (ENSCPOG00000026369) #35	SLC9A9 (ENSCPOG00000000663) #37	DIPK2A (ENSCPOG00000009308)
Sciuridae	DUPLICATION
Sciuridae	ANCESTRAL SPECIES																	ENSGT00940000155481.m #22
Marmotini	ANCESTRAL SPECIES																	ENSGT00940000155481.m #22
Marmotini_b	ANCESTRAL SPECIES																	ENSGT00940000155481.m #22
Arctic ground squirrel	MODERN SPECIES	654																ENSUPAG00010013928 #22	KIF20B (ENSUPAG00010013899)	PANK1 (ENSUPAG00010013871)	SLC16A12 (ENSUPAG00010013854)	IFIT5 (ENSUPAG00010013853)	ENSUPAG00010013848
Sciuridae	ANCESTRAL SPECIES	26	ENSGT00940000162075	ENSGT00390000007772	ENSGT00390000006095	ENSGT00900000141083.d	ENSGT00940000160165	ENSGT00940000159675 #13	ENSGT00950000183179.b.b #14	ENSGT00950000183086.a.a.b #15	ENSGT00530000064220 #16	ENSGT00940000154369.d #17	ENSGT01030000234629.C #18	ENSGT00390000016324 #19	ENSGT00940000161449 #20	ENSGT00940000158201 #21	ENSGT00530000068221	ENSGT00940000155481.n #22	ENSGT00940000160511 #23	ENSGT01030000234579.A.b #24	ENSGT00940000157909.j #26	ENSGT01000000214434.A #27	ENSGT00670000098080 #28	ENSGT00940000155714 #29	ENSGT00950000183097.a.b #30	ENSGT01060000248594.f #31	ENSGT00940000157649 #32	ENSGT00940000162334 #33	ENSGT00390000010687.a.a #34	ENSGT00940000161292 #35	ENSGT00940000160094 #37	ENSGT00520000055625.b	ENSGT01030000234558.A.a.b
Marmotini	ANCESTRAL SPECIES	25	ENSGT00390000007772.l	ENSGT00390000007772.k	ENSGT00390000006095	ENSGT00900000141083.d	ENSGT00940000160165	ENSGT00940000159675 #13	ENSGT00950000183179.b.b #14	ENSGT00950000183086.a.a.b #15	ENSGT00530000064220 #16	ENSGT00940000154369.d #17	ENSGT01030000234629.C #18	ENSGT00390000016324 #19	ENSGT00940000161449 #20	ENSGT00940000158201 #21	ENSGT00530000068221	ENSGT00940000155481.n #22	ENSGT00940000160511 #23	ENSGT01030000234579.A.b.p #24	ENSGT00940000157909.j #26	ENSGT01000000214434.A #27	ENSGT00670000098080 #28	ENSGT00940000155714 #29	ENSGT00950000183097.a.b #30	ENSGT01060000248594.f #31	ENSGT00940000157649 #32	ENSGT00940000162334 #33	ENSGT00390000010687.a.a #34	ENSGT00940000161292 #35	ENSGT00940000160094 #37	ENSGT00520000055625.b	ENSGT01030000234558.A.a.b
Marmotini_b	ANCESTRAL SPECIES	46	ENSGT00940000162075	ENSGT00390000007772.k	ENSGT00390000006095	ENSGT00900000141083.d	ENSGT00940000160165	ENSGT00940000159675 #13	ENSGT00950000183179.b.b #14	ENSGT00950000183086.a.a.b #15	ENSGT00530000064220 #16	ENSGT00940000154369.d #17	ENSGT01030000234629.C #18	ENSGT00390000016324 #19	ENSGT00940000161449 #20	ENSGT00940000158201 #21	ENSGT00530000068221	ENSGT00940000155481.n #22	ENSGT00940000160511 #23	ENSGT01030000234579.A.b.p #24	ENSGT00940000157909.j #26	ENSGT01000000214434.A #27	ENSGT00670000098080 #28	ENSGT00940000155714 #29	ENSGT00950000183097.a.b #30	ENSGT01060000248594.f #31	ENSGT00940000157649 #32	ENSGT00940000162334 #33	ENSGT00390000010687.a.a #34	ENSGT00940000161292 #35	ENSGT00940000160094 #37	ENSGT00520000055625.b	ENSGT01030000234558.A.a.b
Squirrel	MODERN SPECIES	140	MRPS22 (ENSSTOG00000014224)	ENSSTOG00000024304	COPB2 (ENSSTOG00000014231)	RBP2 (ENSSTOG00000027268)	RBP1 (ENSSTOG00000005673) #13	NMNAT3 (ENSSTOG00000005679) #14	CLSTN2 (ENSSTOG00000002012) #15	TRIM42 (ENSSTOG00000020710) #16	ENSSTOG00000025591	SLC25A36 (ENSSTOG00000022588) #17	SPSB4 (ENSSTOG00000024795) #18	PXYLP1 (ENSSTOG00000024318) #19	ZBTB38 (ENSSTOG00000025333) #20	RASA2 (ENSSTOG00000010098) #21	ENSSTOG00000031767	RNF7 (ENSSTOG00000014964) #22	Grk7 (ENSSTOG00000021157) #23	ENSSTOG00000013235 #24	TFDP2 (ENSSTOG00000013241) #26	GK5 (ENSSTOG00000013540) #27	XRN1 (ENSSTOG00000013552) #28	ATR (ENSSTOG00000021792) #29	ENSSTOG00000034418	PLS1 (ENSSTOG00000009305) #30	TRPC1 (ENSSTOG00000024889) #31	PCOLCE2 (ENSSTOG00000015983) #32	PAQR9 (ENSSTOG00000028103) #33	U2SURP (ENSSTOG00000015997) #34	CHST2 (ENSSTOG00000022233) #35	SLC9A9 (ENSSTOG00000016009) #37	BDNF (ENSSTOG00000009446)
Arctic ground squirrel	MODERN SPECIES	35	ENSUPAG00010007807	MRPS22 (ENSUPAG00010007811)	COPB2 (ENSUPAG00010007828)	RBP2 (ENSUPAG00010007849)	RBP1 (ENSUPAG00010007876) #13	NMNAT3 (ENSUPAG00010007888) #14	CLSTN2 (ENSUPAG00010007944) #15	TRIM42 (ENSUPAG00010007998) #16	ENSUPAG00010008012	SLC25A36 (ENSUPAG00010008022) #17	SPSB4 (ENSUPAG00010008032) #18	PXYLP1 (ENSUPAG00010008036) #19	ZBTB38 (ENSUPAG00010008043) #20	RASA2 (ENSUPAG00010008044) #21	ENSUPAG00010008087	ENSUPAG00010008104 #22	GRK7 (ENSUPAG00010008111) #23	ATP1B3 (ENSUPAG00010008116) #24	TFDP2 (ENSUPAG00010008140) #26	GK5 (ENSUPAG00010008189) #27	XRN1 (ENSUPAG00010008232) #28	ATR (ENSUPAG00010008391) #29	PLS1 (ENSUPAG00010008455) #30	TRPC1 (ENSUPAG00010008473) #31	PCOLCE2 (ENSUPAG00010008520) #32	PAQR9 (ENSUPAG00010008526) #33	U2SURP (ENSUPAG00010008534) #34	CHST2 (ENSUPAG00010008705) #35	SLC9A9 (ENSUPAG00010008711) #37	DIPK2A (ENSUPAG00010008726)	PLOD2 (ENSUPAG00010008740)
Alpin marmot	MODERN SPECIES	19	ENSMMMG00000017792	ENSMMMG00000017780	MRPS22 (ENSMMMG00000017768)	COPB2 (ENSMMMG00000017742)	RBP2 (ENSMMMG00000017732)	RBP1 (ENSMMMG00000017717) #13	NMNAT3 (ENSMMMG00000017702) #14	CLSTN2 (ENSMMMG00000017668) #15	TRIM42 (ENSMMMG00000017638) #16	SLC25A36 (ENSMMMG00000017615) #17	ENSMMMG00000017610 #18	PXYLP1 (ENSMMMG00000017602) #19	ENSMMMG00000017581 #20	RASA2 (ENSMMMG00000017563) #21	ENSMMMG00000017545	RNF7 (ENSMMMG00000017538) #22	ENSMMMG00000017532 #24	TFDP2 (ENSMMMG00000017474) #26	GK5 (ENSMMMG00000017449) #27	ENSMMMG00000017439	XRN1 (ENSMMMG00000017320) #28	ENSMMMG00000017314	ATR (ENSMMMG00000017237) #29	PLS1 (ENSMMMG00000017219) #30	TRPC1 (ENSMMMG00000017198) #31	PCOLCE2 (ENSMMMG00000017184) #32	PAQR9 (ENSMMMG00000017183) #33	U2SURP (ENSMMMG00000017089) #34	CHST2 (ENSMMMG00000017088) #35	SLC9A9 (ENSMMMG00000017071) #37	ENSMMMG00000017056
Eurasian red squirrel	MODERN SPECIES	1	ENSSVLG00005007777	FOXL2 (ENSSVLG00005007808)	ENSSVLG00005007908	ENSSVLG00005007923	MRPS22 (ENSSVLG00005007938)	COPB2 (ENSSVLG00005008031)	RBP2 (ENSSVLG00005008067)	RBP1 (ENSSVLG00005008104) #13	NMNAT3 (ENSSVLG00005008155) #14	CLSTN2 (ENSSVLG00005008254) #15	TRIM42 (ENSSVLG00005008347) #16	SPSB4 (ENSSVLG00005008430) #18	PXYLP1 (ENSSVLG00005008459) #19	ZBTB38 (ENSSVLG00005008552) #20	RASA2 (ENSSVLG00005008569) #21	RNF7 (ENSSVLG00005008607) #22	GRK7 (ENSSVLG00005008644) #23	ENSSVLG00005008685 #24	TFDP2 (ENSSVLG00005008716) #26	ENSSVLG00005008823	GK5 (ENSSVLG00005008881) #27	XRN1 (ENSSVLG00005009003) #28	ATR (ENSSVLG00005009179) #29	PLS1 (ENSSVLG00005009713) #30	ENSSVLG00005009814	TRPC1 (ENSSVLG00005009874) #31	ENSSVLG00005009949	PCOLCE2 (ENSSVLG00005009992) #32	PAQR9 (ENSSVLG00005010124) #33	U2SURP (ENSSVLG00005010214) #34	CHST2 (ENSSVLG00005011831) #35
Rodentia_B	ANCESTRAL SPECIES	2	ENSGT00940000162075	ENSGT00390000007772	ENSGT00390000006095	ENSGT00900000141083.d	ENSGT00940000160165	ENSGT00940000159675 #13	ENSGT00950000183179.b.b #14	ENSGT00950000183086.a.a.b #15	ENSGT00530000064220 #16	ENSGT00940000154369.d #17	ENSGT01030000234629.C #18	ENSGT00390000016324 #19	ENSGT00940000161449 #20	ENSGT00940000158201 #21	ENSGT00530000068221	ENSGT00940000155481 #22	ENSGT00940000160511 #23	ENSGT01030000234579.A.b #24	ENSGT00940000157909.j #26	ENSGT01000000214434.A #27	ENSGT00670000098080 #28	ENSGT00940000155714 #29	ENSGT00950000183097.a.b #30	ENSGT01060000248594.f #31	ENSGT00940000157649 #32	ENSGT00940000162334 #33	ENSGT00390000010687.a.a #34	ENSGT00940000161292 #35	ENSGT00940000160094 #37	ENSGT00520000055625.b	ENSGT01030000234558.A.a.b
Kangaroo rat	MODERN SPECIES	443									Clstn2 (ENSDORG00000015895) #15	Trim42 (ENSDORG00000009003) #16	Slc25a36 (ENSDORG00000011634) #17	Pxylp1 (ENSDORG00000009808) #19	ENSDORG00000005705 #20	Rasa2 (ENSDORG00000001995) #21	Gm28729 (ENSDORG00000029603)	ENSDORG00000025570 #22	ENSDORG00000029879	ENSDORG00000023219 #26	Gk5 (ENSDORG00000023582) #27	Xrn1 (ENSDORG00000013833) #28	Atr (ENSDORG00000000389) #29	Pls1 (ENSDORG00000009841) #30	Trpc1 (ENSDORG00000013958) #31	Pcolce2 (ENSDORG00000013959) #32	ENSDORG00000005201 #34	Slc9a9 (ENSDORG00000011135) #37	ENSDORG00000028495	Plod2 (ENSDORG00000003217)	1700057G04Rik (ENSDORG00000014306)	Plscr5 (ENSDORG00000028115)	ENSDORG00000024749
Myomorpha	ANCESTRAL SPECIES	58	ENSGT00940000162075	ENSGT00390000007772	ENSGT00390000006095	ENSGT00900000141083.d	ENSGT00940000160165	ENSGT00940000159675 #13	ENSGT00950000183179.b.b #14	ENSGT00950000183086.a.a.b #15	ENSGT00530000064220 #16	ENSGT00940000154369.d #17	ENSGT01030000234629.C #18	ENSGT00390000016324 #19	ENSGT00940000161449 #20	ENSGT00940000158201 #21	ENSGT00530000068221	ENSGT00940000155481 #22	ENSGT00940000160511 #23	ENSGT01030000234579.A.b #24	ENSGT00940000157909.j #26	ENSGT01000000214434.A #27	ENSGT00670000098080 #28	ENSGT00940000155714 #29	ENSGT00950000183097.a.b #30	ENSGT01060000248594.f #31	ENSGT00940000157649 #32	ENSGT00940000162334 #33	ENSGT00390000010687.a.a #34	ENSGT00940000161292 #35	ENSGT00940000160094 #37	ENSGT00520000055625.b	ENSGT01030000234558.A.a.b
Muroidea	ANCESTRAL SPECIES	71	ENSGT00940000162075	ENSGT00390000007772	ENSGT00390000006095	ENSGT00900000141083.d	ENSGT00940000160165	ENSGT00940000159675 #13	ENSGT00950000183179.b.b #14	ENSGT00950000183086.a.a.b #15	ENSGT00530000064220 #16	ENSGT00940000154369.d #17	ENSGT01030000234629.C #18	ENSGT00390000016324 #19	ENSGT00940000161449 #20	ENSGT00940000158201 #21	ENSGT00530000068221	ENSGT00940000155481 #22	ENSGT01030000234579.A.b #24	ENSGT00940000157909.j #26	ENSGT01000000214434.A #27	ENSGT00670000098080 #28	ENSGT00940000155714 #29	ENSGT00950000183097.a.b #30	ENSGT01060000248594.f #31	ENSGT00940000157649 #32	ENSGT00940000162334 #33	ENSGT00390000010687.a.a #34	ENSGT00940000161292 #35	ENSGT00940000160094 #37	ENSGT00520000055625.b	ENSGT01030000234558.A.a.b	ENSGT00940000161947
Upper Galilee mountains blind mole rat	MODERN SPECIES	1555													Zbtb38 (ENSNGAG00000012329) #20	Rasa2 (ENSNGAG00000012075) #21	Gm28729 (ENSNGAG00000011526)	ENSNGAG00000014971 #22
Muroidea_A	ANCESTRAL SPECIES	6	ENSGT00390000007772.f	ENSGT00390000007772.e	ENSGT00390000006095	ENSGT00900000141083.d	ENSGT00940000160165	ENSGT00940000159675 #13	ENSGT00950000183179.b.b #14	ENSGT00950000183086.a.a.b #15	ENSGT00530000064220 #16	ENSGT00940000154369.d #17	ENSGT01030000234629.C #18	ENSGT00390000016324 #19	ENSGT00940000161449 #20	ENSGT00940000158201 #21	ENSGT00530000068221	ENSGT00940000155481 #22	ENSGT01030000234579.A.b #24	ENSGT00940000157909.j #26	ENSGT01000000214434.A #27	ENSGT00670000098080 #28	ENSGT00940000155714 #29	ENSGT00950000183097.a.b #30	ENSGT01060000248594.f #31	ENSGT00940000157649 #32	ENSGT00940000162334 #33	ENSGT00390000010687.a.a #34	ENSGT00940000161292 #35	ENSGT00940000160094 #37	ENSGT00520000055625.b	ENSGT01030000234558.A.a.b	ENSGT00940000161947
Cricetidae	ANCESTRAL SPECIES	4	ENSGT00940000162075	ENSGT00390000007772.e	ENSGT00390000006095	ENSGT00900000141083.d	ENSGT00940000160165	ENSGT00940000159675 #13	ENSGT00950000183179.b.b #14	ENSGT00950000183086.a.a.b #15	ENSGT00530000064220 #16	ENSGT00940000154369.d #17	ENSGT01030000234629.C #18	ENSGT00390000016324 #19	ENSGT00940000161449 #20	ENSGT00940000158201 #21	ENSGT00530000068221	ENSGT00940000155481 #22	ENSGT01030000234579.A.b #24	ENSGT00940000157909.j #26	ENSGT01000000214434.A #27	ENSGT00670000098080 #28	ENSGT00940000155714 #29	ENSGT00950000183097.a.b #30	ENSGT01060000248594.f #31	ENSGT00940000157649 #32	ENSGT00940000162334 #33	ENSGT00390000010687.a.a #34	ENSGT00940000161292 #35	ENSGT00940000160094 #37	ENSGT00520000055625.b	ENSGT01030000234558.A.a.b	ENSGT00940000161947
Cricetinae	ANCESTRAL SPECIES	6	ENSGT00940000162075	ENSGT00390000007772.e	ENSGT00390000006095	ENSGT00900000141083.d	ENSGT00940000160165	ENSGT00940000159675 #13	ENSGT00950000183179.b.b #14	ENSGT00950000183086.a.a.b #15	ENSGT00530000064220 #16	ENSGT00940000154369.d #17	ENSGT01030000234629.C #18	ENSGT00390000016324 #19	ENSGT00940000161449 #20	ENSGT00940000158201 #21	ENSGT00530000068221	ENSGT00940000155481 #22	ENSGT01030000234579.A.b #24	ENSGT00940000157909.j #26	ENSGT01000000214434.A #27	ENSGT00670000098080 #28	ENSGT00940000155714 #29	ENSGT00950000183097.a.b #30	ENSGT01060000248594.f #31	ENSGT00940000157649 #32	ENSGT00940000162334 #33	ENSGT00390000010687.a.a #34	ENSGT00940000161292 #35	ENSGT00940000160094 #37	ENSGT00520000055625.b	ENSGT01030000234558.A.a.b	ENSGT00940000161947
Chinese hamster chok1gshd	MODERN SPECIES	284	ENSCGRG00001012181	Mrps22 (ENSCGRG00001010107)	Copb2 (ENSCGRG00001000296)	ENSCGRG00001007659	Rbp2 (ENSCGRG00001013198)	Rbp1 (ENSCGRG00001020893) #13	Nmnat3 (ENSCGRG00001022660) #14	Clstn2 (ENSCGRG00001020983) #15	Trim42 (ENSCGRG00001002575) #16	Slc25a36 (ENSCGRG00001006109) #17	Spsb4 (ENSCGRG00001018096) #18	Pxylp1 (ENSCGRG00001018642) #19	Zbtb38 (ENSCGRG00001001498) #20	Rasa2 (ENSCGRG00001008148) #21	Gm28729 (ENSCGRG00001023152)	ENSCGRG00001019917 #22	Atp1b3 (ENSCGRG00001014009) #24	Tfdp2 (ENSCGRG00001015207) #26	Gk5 (ENSCGRG00001021959) #27	Xrn1 (ENSCGRG00001019411) #28	Atr (ENSCGRG00001018561) #29	Pls1 (ENSCGRG00001019620) #30	Trpc1 (ENSCGRG00001008354) #31	Pcolce2 (ENSCGRG00001024152) #32	Paqr9 (ENSCGRG00001011034) #33	U2surp (ENSCGRG00001019402) #34	Chst2 (ENSCGRG00001005270) #35	Slc9a9 (ENSCGRG00001011746) #37	ENSCGRG00001019093	Plod2 (ENSCGRG00001022906)	Plscr4 (ENSCGRG00001014929)
Golden Hamster	MODERN SPECIES	719		ENSMAUG00000005643	Mrps22 (ENSMAUG00000009906)	Copb2 (ENSMAUG00000002677)	Rbp2 (ENSMAUG00000001165)	Rbp1 (ENSMAUG00000000350) #13	Nmnat3 (ENSMAUG00000014608) #14	Clstn2 (ENSMAUG00000007746) #15	Trim42 (ENSMAUG00000011369) #16	Slc25a36 (ENSMAUG00000010528) ##17	Spsb4 (ENSMAUG00000001794) #18	Pxylp1 (ENSMAUG00000001196) #19	Zbtb38 (ENSMAUG00000000765) #20	Rasa2 (ENSMAUG00000006323) #21	Gm28729 (ENSMAUG00000018725)	ENSMAUG00000016180 #22	Tfdp2 (ENSMAUG00000016744) #26	Gk5 (ENSMAUG00000014487) #27	ENSMAUG00000014268 #28	Atr (ENSMAUG00000013539) #29	Pls1 (ENSMAUG00000014147) #30	Trpc1 (ENSMAUG00000010246) #31	Pcolce2 (ENSMAUG00000013362) #32	ENSMAUG00000009255 #34	Chst2 (ENSMAUG00000006721) #35	Slc9a9 (ENSMAUG00000008995) #37	Dipk2a (ENSMAUG00000007688)	Plod2 (ENSMAUG00000003215)	Plscr4 (ENSMAUG00000009045)	1700057G04Rik (ENSMAUG00000002609)	Plscr2 (ENSMAUG00000006078)
Cricetidae_B	ANCESTRAL SPECIES	23	ENSGT00940000162075	ENSGT00390000007772.e	ENSGT00390000006095	ENSGT00900000141083.d	ENSGT00940000160165	ENSGT00940000159675 #13	ENSGT00950000183179.b.b #14	ENSGT00950000183086.a.a.b #15	ENSGT00530000064220 #16	ENSGT00940000154369.d #17	ENSGT01030000234629.C #18	ENSGT00390000016324 #19	ENSGT00940000161449 #20	ENSGT00940000158201 #21	ENSGT00530000068221	ENSGT00940000155481 #22	ENSGT01030000234579.A.b #24	ENSGT00940000157909.j #26	ENSGT01000000214434.A #27	ENSGT00670000098080 #28	ENSGT00940000155714 #29	ENSGT00950000183097.a.b #30	ENSGT01060000248594.f #31	ENSGT00940000157649 #32	ENSGT00940000162334 #33	ENSGT00390000010687.a.a #34	ENSGT00940000161292 #35	ENSGT00940000160094 #37	ENSGT00520000055625.b	ENSGT01030000234558.A.a.b	ENSGT00940000161947
Northern American deer mouse	MODERN SPECIES	20	Mrps22 (ENSPEMG00000020399)	Copb2 (ENSPEMG00000015558)	Rbp2 (ENSPEMG00000016242)	Rbp1 (ENSPEMG00000020449) #13	Nmnat3 (ENSPEMG00000020493) #14	Clstn2 (ENSPEMG00000020916) #15	Trim42 (ENSPEMG00000020887) #16	Slc25a36 (ENSPEMG00000029457) #17	Spsb4 (ENSPEMG00000021848) #18	Pxylp1 (ENSPEMG00000027594) #19	ENSPEMG00000001384	Zbtb38 (ENSPEMG00000021180) #20	ENSPEMG00000020968	Rasa2 (ENSPEMG00000020689) #21	Gm28729 (ENSPEMG00000021490)	ENSPEMG00000020541 #22	ENSPEMG00000025894 #24	Tfdp2 (ENSPEMG00000020459) #26	Gk5 (ENSPEMG00000021213) #27	ENSPEMG00000028629	Xrn1 (ENSPEMG00000020610) #28	Atr (ENSPEMG00000022407) #29	Pls1 (ENSPEMG00000023583) #30	Trpc1 (ENSPEMG00000021151) #31	Pcolce2 (ENSPEMG00000021235) #32	Paqr9 (ENSPEMG00000021256) #33	U2surp (ENSPEMG00000020825) #34	Chst2 (ENSPEMG00000019658) #35	Slc9a9 (ENSPEMG00000019907) #37	Dipk2a (ENSPEMG00000019631)	ENSPEMG00000019304
Prairie vole	DUPLICATION
Prairie vole	MODERN SPECIES	95	ENSMOCG00000012631	Mrps22 (ENSMOCG00000020667)	Copb2 (ENSMOCG00000014780)	Rbp2 (ENSMOCG00000012766)	Rbp1 (ENSMOCG00000016179) #13	Nmnat3 (ENSMOCG00000011048) #14	ENSMOCG00000018441	Clstn2 (ENSMOCG00000001008) #15	Trim42 (ENSMOCG00000001679) #16	Slc25a36 (ENSMOCG00000019824) #17	Spsb4 (ENSMOCG00000012549) #18	Pxylp1 (ENSMOCG00000009663) #19	Zbtb38 (ENSMOCG00000017136) #20	Rasa2 (ENSMOCG00000000075) #21	Gm28729 (ENSMOCG00000015027)	ENSMOCG00000019098 #22	Atp1b3 (ENSMOCG00000007305) #24	Tfdp2 (ENSMOCG00000004728) #26	Gk5 (ENSMOCG00000000891) #27	Xrn1 (ENSMOCG00000008665) #28	Atr (ENSMOCG00000015022) #29	Pls1 (ENSMOCG00000001489) #30	Trpc1 (ENSMOCG00000000260) #31	Pcolce2 (ENSMOCG00000008199) #32	Paqr9 (ENSMOCG00000001088) #33	U2surp (ENSMOCG00000000631) #34	Chst2 (ENSMOCG00000014642) #35	Slc9a9 (ENSMOCG00000007053) #37	ENSMOCG00000015904	ENSMOCG00000022382	Plod2 (ENSMOCG00000014848)
Prairie vole	MODERN SPECIES		Ppp4r3a (ENSMOCG00000013498)	ENSMOCG00000016889	Gpr68 (ENSMOCG00000019936)	Dglucy (ENSMOCG00000003275)	Rps6ka5 (ENSMOCG00000022616)	ENSMOCG00000015245	Ttc7b (ENSMOCG00000005960)	Calm1 (ENSMOCG00000015392) ##25	Nrde2 (ENSMOCG00000014472)	ENSMOCG00000002580	Kcnk13 (ENSMOCG00000020284)	ENSMOCG00000005194	Tdp1 (ENSMOCG00000013510)	Efcab11 (ENSMOCG00000011188)	ENSMOCG00000007784	ENSMOCG00000021788 #22	Foxn3 (ENSMOCG00000022730)	Ttc8 (ENSMOCG00000012895)	Eml5 (ENSMOCG00000015579)	Zc3h14 (ENSMOCG00000014022)	Ptpn21 (ENSMOCG00000022958)	Spata7 (ENSMOCG00000014280)	Kcnk10 (ENSMOCG00000013337)	Gpr65 (ENSMOCG00000004068)	Galc (ENSMOCG00000009051)	ENSMOCG00000019321	Flrt2 (ENSMOCG00000002749)	ENSMOCG00000022811	Sel1l (ENSMOCG00000021690)	Ston2 (ENSMOCG00000021519)	Gtf2a1 (ENSMOCG00000020104)
Murinae	ANCESTRAL SPECIES	3	ENSGT00390000007772.f	ENSGT00390000007772.e	ENSGT00390000006095	ENSGT00900000141083.d	ENSGT00940000160165	ENSGT00940000159675 #13	ENSGT00950000183179.b.b #14	ENSGT00950000183086.a.a.b #15	ENSGT00530000064220 #16	ENSGT00940000154369.d #17	ENSGT01030000234629.C #18	ENSGT00390000016324 #19	ENSGT00940000161449 #20	ENSGT00940000158201 #21	ENSGT00530000068221	ENSGT00940000155481 #22	ENSGT01030000234579.A.b #24	ENSGT00940000157909.j #26	ENSGT01000000214434.A #27	ENSGT00670000098080 #28	ENSGT00940000155714 #29	ENSGT00960000192143	ENSGT00950000183097.a.b #30	ENSGT01060000248594.f #31	ENSGT00940000157649 #32	ENSGT00940000162334 #33	ENSGT00390000010687.a.a #34	ENSGT00940000161292 #35	ENSGT00940000160094 #37	ENSGT00520000055625.b	ENSGT01030000234558.A.a.b
Rat	MODERN SPECIES	18	Mrps22 (ENSRNOG00000047984)	Copb2 (ENSRNOG00000060723)	Rbp2 (ENSRNOG00000013932)	Rbp1 (ENSRNOG00000013794) #13	Nmnat3 (ENSRNOG00000013585) #14	Clstn2 (ENSRNOG00000043085) #15	Trim42 (ENSRNOG00000048975) #16	Rps17 (ENSRNOG00000045885)	Slc25a36 (ENSRNOG00000013802) #17	AABR07071210.1 (ENSRNOG00000023330)	Spsb4 (ENSRNOG00000012862) #18	Pxylp1 (ENSRNOG00000012480) #19	Zbtb38 (ENSRNOG00000012386) #20	Rasa2 (ENSRNOG00000011909) #21	LOC102551788 (ENSRNOG00000053034)	Rnf7 (ENSRNOG00000011663) #22	AABR07067339.1 (ENSRNOG00000022456)	Atp1b3 (ENSRNOG00000011501) #24	AABR07071195.1 (ENSRNOG00000030296)	Tfdp2 (ENSRNOG00000011241) #26	Gk5 (ENSRNOG00000010942) #27	Xrn1 (ENSRNOG00000042951) #28	ENSRNOG00000066967	Atr (ENSRNOG00000010027) #29	ENSRNOG00000066029	Pls1 (ENSRNOG00000009945) #30	Trpc1 (ENSRNOG00000054902) #31	PCOLCE2 (ENSRNOG00000046848) #32	LOC501038 (ENSRNOG00000033654)	U2surp (ENSRNOG00000008607) #34	ENSRNOG00000065106
Mus	ANCESTRAL SPECIES	4	ENSGT00390000007772.e.h.b	ENSGT00390000007772.e.h.a	ENSGT00390000006095	ENSGT00900000141083.d	ENSGT00940000160165	ENSGT00940000159675 #13	ENSGT00950000183179.b.b #14	ENSGT00950000183086.a.a.b #15	ENSGT00530000064220 #16	ENSGT00940000154369.d #17	ENSGT01030000234629.C #18	ENSGT00390000016324 #19	ENSGT00940000161449 #20	ENSGT00940000158201 #21	ENSGT00530000068221	ENSGT00940000155481 #22	ENSGT01030000234579.A.b #24	ENSGT00940000157909.j #26	ENSGT01000000214434.A #27	ENSGT00670000098080 #28	ENSGT00940000155714 #29	ENSGT00960000192143	ENSGT00950000183097.a.b #30	ENSGT01060000248594.f #31	ENSGT00940000157649 #32	ENSGT00940000162334 #33	ENSGT00390000010687.a.a #34	ENSGT00940000161292 #35	ENSGT00940000160094 #37	ENSGT00520000055625.b	ENSGT01030000234558.A.a.b
Shrew mouse	MODERN SPECIES	1	MGP_PahariEiJ_G0015423	MGP_PahariEiJ_G0015422	Prr23a2 (MGP_PahariEiJ_G0015421)	Mrps22 (MGP_PahariEiJ_G0015420)	Copb2 (MGP_PahariEiJ_G0015419)	Rbp2 (MGP_PahariEiJ_G0015418)	Rbp1 (MGP_PahariEiJ_G0015417) #13	Nmnat3 (MGP_PahariEiJ_G0015416) #14	Clstn2 (MGP_PahariEiJ_G0015415) #15	Trim42 (MGP_PahariEiJ_G0015414) #16	Slc25a36 (MGP_PahariEiJ_G0015413) #17	Spsb4 (MGP_PahariEiJ_G0015412) #18	Pxylp1 (MGP_PahariEiJ_G0015411) #19	Zbtb38 (MGP_PahariEiJ_G0015410) #20	Rasa2 (MGP_PahariEiJ_G0015409) #21	MGP_PahariEiJ_G0015408 #22	Atp1b3 (MGP_PahariEiJ_G0015407) #24	Tfdp2 (MGP_PahariEiJ_G0015406) #26	Gk5 (MGP_PahariEiJ_G0015405) #27	Xrn1 (MGP_PahariEiJ_G0015404) #28	Atr (MGP_PahariEiJ_G0015403) #29	Pls1 (MGP_PahariEiJ_G0015402) #30	Trpc1 (MGP_PahariEiJ_G0015401) #31	Pcolce2 (MGP_PahariEiJ_G0015400) #32	Paqr9 (MGP_PahariEiJ_G0015399) #33	U2surp (MGP_PahariEiJ_G0015398) #34	Chst2 (MGP_PahariEiJ_G0015397) #35	Slc9a9 (MGP_PahariEiJ_G0015396) #37	Dipk2a (MGP_PahariEiJ_G0015395)	Plod2 (MGP_PahariEiJ_G0015394)	Plscr4 (MGP_PahariEiJ_G0015393)
Mus_A	ANCESTRAL SPECIES	4	ENSGT00390000007772.e.g	ENSGT00390000007772.e.h.a	ENSGT00390000006095	ENSGT00900000141083.d	ENSGT00940000160165	ENSGT00940000159675 #13	ENSGT00950000183179.b.b #14	ENSGT00950000183086.a.a.b #15	ENSGT00530000064220 #16	ENSGT00940000154369.d #17	ENSGT01030000234629.C #18	ENSGT00390000016324 #19	ENSGT00940000161449 #20	ENSGT00940000158201 #21	ENSGT00530000068221	ENSGT00940000155481 #22	ENSGT01030000234579.A.b #24	ENSGT00940000157909.j #26	ENSGT01000000214434.A #27	ENSGT00670000098080 #28	ENSGT00940000155714 #29	ENSGT00960000192143	ENSGT00950000183097.a.b #30	ENSGT01060000248594.f #31	ENSGT00940000157649 #32	ENSGT00940000162334 #33	ENSGT00390000010687.a.a #34	ENSGT00940000161292 #35	ENSGT00940000160094 #37	ENSGT00520000055625.b	ENSGT01030000234558.A.a.b
Ryukyu mouse	MODERN SPECIES		A830018L16Rik (MGP_CAROLIEiJ_G0013950)	Prex2 (MGP_CAROLIEiJ_G0013949)	Cpa6 (MGP_CAROLIEiJ_G0013948)	Arfgef1 (MGP_CAROLIEiJ_G0013947)	Cspp1 (MGP_CAROLIEiJ_G0013946)	Cops5 (MGP_CAROLIEiJ_G0013945)	Ppp1r42 (MGP_CAROLIEiJ_G0013944)	Tcf24 (MGP_CAROLIEiJ_G0013943)	Mcmdc2 (MGP_CAROLIEiJ_G0013942)	Sgk3 (MGP_CAROLIEiJ_G0013941)	Vcpip1 (MGP_CAROLIEiJ_G0013940)	Mybl1 (MGP_CAROLIEiJ_G0013939)	Vxn (MGP_CAROLIEiJ_G0013938)	Adhfe1 (MGP_CAROLIEiJ_G0013937)	Rrs1 (MGP_CAROLIEiJ_G0013936)	MGP_CAROLIEiJ_G0013935 #22	Sntg1 (MGP_CAROLIEiJ_G0013934)	MGP_CAROLIEiJ_G0013933	St18 (MGP_CAROLIEiJ_G0013932)	Alkal1 (MGP_CAROLIEiJ_G0013931)	Rb1cc1 (MGP_CAROLIEiJ_G0013930)	Npbwr1 (MGP_CAROLIEiJ_G0013929)	Oprk1 (MGP_CAROLIEiJ_G0013928)	Atp6v1h (MGP_CAROLIEiJ_G0013927)	Rgs20 (MGP_CAROLIEiJ_G0013926)	Tcea1 (MGP_CAROLIEiJ_G0013925)	MGP_CAROLIEiJ_G0013924	Lypla1 (MGP_CAROLIEiJ_G0013923)	Mrpl15 (MGP_CAROLIEiJ_G0013922)	Sox17 (MGP_CAROLIEiJ_G0013921)	Rp1 (MGP_CAROLIEiJ_G0013920)
Mus_B	DUPLICATION
Mus_B	DUPLICATION
Mus_B	ANCESTRAL SPECIES	10	ENSGT00860000135730	ENSGT00390000014794.b	ENSGT00390000004181	ENSGT00940000161078	ENSGT00940000157470	ENSGT00530000063713.a	ENSGT00960000190901	ENSGT00390000014082.b	ENSGT00940000158394	ENSGT00390000000984	ENSGT00940000158210	ENSGT00940000158794	ENSGT00940000160543	ENSGT00860000136009	ENSGT01030000234543.B.f	ENSGT00940000155481.q.a #22	ENSGT00940000159378	ENSGT00940000159406	ENSGT00940000158924	ENSGT00940000153441.a.b	ENSGT00940000161556	ENSGT00390000017595.e	ENSGT00390000017595.f	ENSGT00940000157720	ENSGT00940000155595	ENSGT00780000122010	ENSGT00940000157520	ENSGT00940000158935	ENSGT00530000063672.a	ENSGT00520000055589.c	ENSGT00940000155901.b
Mouse	MODERN SPECIES	1	Ank3 (ENSMUSG00000069601)	Cdk1 (ENSMUSG00000019942)	Rhobtb1 (ENSMUSG00000019944)	Tmem26 (ENSMUSG00000060044)	Cabcoco1 (ENSMUSG00000019945)	Arid5b (ENSMUSG00000019947)	Rtkn2 (ENSMUSG00000037846)	Zfp365 (ENSMUSG00000037855)	Ado (ENSMUSG00000057134)	Egr2 (ENSMUSG00000037868)	Nrbf2 (ENSMUSG00000075000)	Jmjd1c (ENSMUSG00000037876)	Reep3 (ENSMUSG00000019873)	Lrrtm3 (ENSMUSG00000042846)	Ctnna3 (ENSMUSG00000060843)	Rnf7l (ENSMUSG00000048185) #22	Dnajc12 (ENSMUSG00000036764)	Sirt1 (ENSMUSG00000020063)	Herc4 (ENSMUSG00000020064)	Mypn (ENSMUSG00000020067)	Atoh7 (ENSMUSG00000036816)	Pbld1 (ENSMUSG00000112129)	Pbld2 (ENSMUSG00000020072)	Hnrnph3 (ENSMUSG00000020069)	Rufy2 (ENSMUSG00000020070)	Dna2 (ENSMUSG00000036875)	Slc25a16 (ENSMUSG00000071253)	Tet1 (ENSMUSG00000047146)	Ccar1 (ENSMUSG00000020074)	Stox1 (ENSMUSG00000036923)	Ddx50 (ENSMUSG00000020076)
Mus_C	ANCESTRAL SPECIES	7	ENSGT00860000135730	ENSGT00390000014794.b	ENSGT00390000004181	ENSGT00940000161078	ENSGT00940000157470	ENSGT00530000063713.a	ENSGT00960000190901	ENSGT00390000014082.b	ENSGT00940000158394	ENSGT00390000000984	ENSGT00940000158210	ENSGT00940000158794	ENSGT00940000160543	ENSGT00860000136009	ENSGT01030000234543.B.f	ENSGT00940000155481.q.a #22	ENSGT00940000159378	ENSGT00940000159406	ENSGT00940000158924	ENSGT00940000153441.a.b	ENSGT00940000161556	ENSGT00390000017595.f	ENSGT00940000157720	ENSGT00940000155595	ENSGT00780000122010	ENSGT00940000157520	ENSGT00940000158935	ENSGT00530000063672.a	ENSGT00520000055589.c	ENSGT00940000155901.b	ENSGT00940000155043
spretus	MODERN SPECIES	1	Rhobtb1 (MGP_SPRETEiJ_G0016229)	Tmem26 (MGP_SPRETEiJ_G0016228)	Cabcoco1 (MGP_SPRETEiJ_G0016227)	Arid5b (MGP_SPRETEiJ_G0016226)	Rtkn2 (MGP_SPRETEiJ_G0016225)	Zfp365 (MGP_SPRETEiJ_G0016224)	MGP_SPRETEiJ_G0016223	Ado (MGP_SPRETEiJ_G0016222)	Egr2 (MGP_SPRETEiJ_G0016221)	Nrbf2 (MGP_SPRETEiJ_G0016220)	Jmjd1c (MGP_SPRETEiJ_G0016219)	Reep3 (MGP_SPRETEiJ_G0016218)	Lrrtm3 (MGP_SPRETEiJ_G0016217)	MGP_SPRETEiJ_G0016216	Ctnna3 (MGP_SPRETEiJ_G0016215)	Rnf7l (MGP_SPRETEiJ_G0016214) #22	Dnajc12 (MGP_SPRETEiJ_G0016213)	Sirt1 (MGP_SPRETEiJ_G0016212)	Herc4 (MGP_SPRETEiJ_G0016211)	Mypn (MGP_SPRETEiJ_G0016210)	Atoh7 (MGP_SPRETEiJ_G0016209)	Hnrnph3 (MGP_SPRETEiJ_G0016207)	Rufy2 (MGP_SPRETEiJ_G0016206)	Dna2 (MGP_SPRETEiJ_G0016205)	Slc25a16 (MGP_SPRETEiJ_G0016204)	Tet1 (MGP_SPRETEiJ_G0016203)	Ccar1 (MGP_SPRETEiJ_G0016202)	Stox1 (MGP_SPRETEiJ_G0016201)	Ddx50 (MGP_SPRETEiJ_G0016200)	Ddx21 (MGP_SPRETEiJ_G0016199)	Kifbp (MGP_SPRETEiJ_G0016198)
Steppe mouse	MODERN SPECIES	2785												C9orf72 (ENSMSIG00000025834)	ENSMSIG00000025850	Ifnk (ENSMSIG00000025861)	Mob3b (ENSMSIG00000025868)	ENSMSIG00000025873 #22	Cga (ENSMSIG00000025874)	Zfp292 (ENSMSIG00000025880)
Mus_B	ANCESTRAL SPECIES	3	ENSGT00390000007772.e.h.b	ENSGT00390000007772.e.h.a	ENSGT00390000006095	ENSGT00900000141083.d	ENSGT00940000160165	ENSGT00940000159675 #13	ENSGT00950000183179.b.b #14	ENSGT00950000183086.a.a.b #15	ENSGT00530000064220 #16	ENSGT00940000154369.d #17	ENSGT01030000234629.C #18	ENSGT00390000016324 #19	ENSGT00940000161449 #20	ENSGT00940000158201 #21	ENSGT00530000068221	ENSGT00940000155481.q.b #22	ENSGT01030000234579.A.b #24	ENSGT00940000157909.j #26	ENSGT01000000214434.A #27	ENSGT00670000098080 #28	ENSGT00940000155714 #29	ENSGT00960000192143	ENSGT00950000183097.a.b #30	ENSGT01060000248594.f #31	ENSGT00940000157649 #32	ENSGT00940000162334 #33	ENSGT00390000010687.a.a #34	ENSGT00940000161292 #35	ENSGT00940000160094 #37	ENSGT00520000055625.b	ENSGT01030000234558.A.a.b
Mus_C	ANCESTRAL SPECIES	23	ENSGT00390000007772.f	ENSGT00390000007772.e.g	ENSGT00390000007772.e.h.a	ENSGT00390000006095	ENSGT00900000141083.d	ENSGT00940000160165	ENSGT00940000159675 #13	ENSGT00950000183179.b.b #14	ENSGT00950000183086.a.a.b #15	ENSGT00530000064220 #16	ENSGT00940000154369.d #17	ENSGT01030000234629.C #18	ENSGT00390000016324 #19	ENSGT00940000161449 #20	ENSGT00940000158201 #21	ENSGT00940000155481.q.b #22	ENSGT00530000068221	ENSGT00940000155481.r #22	ENSGT01030000234579.A.b #24	ENSGT00940000157909.j #26	ENSGT01000000214434.A #27	ENSGT00670000098080 #28	ENSGT00940000155714 #29	ENSGT00960000192143	ENSGT00950000183097.a.b #30	ENSGT01060000248594.f #31	ENSGT00940000157649 #32	ENSGT00940000162334 #33	ENSGT00390000010687.a.a #34	ENSGT00940000161292 #35	ENSGT00940000160094 #37
spretus	MODERN SPECIES	18	MGP_SPRETEiJ_G0033697	MGP_SPRETEiJ_G0033696	Mrps22 (MGP_SPRETEiJ_G0033695)	Copb2 (MGP_SPRETEiJ_G0033694)	Rbp2 (MGP_SPRETEiJ_G0033693)	Rbp1 (MGP_SPRETEiJ_G0033692) #13	MGP_SPRETEiJ_G0033691	Nmnat3 (MGP_SPRETEiJ_G0033690) #14	Clstn2 (MGP_SPRETEiJ_G0033689) #15	Trim42 (MGP_SPRETEiJ_G0033688) #16	Slc25a36 (MGP_SPRETEiJ_G0033687) #17	Spsb4 (MGP_SPRETEiJ_G0033686) #18	Pxylp1 (MGP_SPRETEiJ_G0033685) #19	Zbtb38 (MGP_SPRETEiJ_G0033684) #20	Rasa2 (MGP_SPRETEiJ_G0033683) #21	Rnf7 (MGP_SPRETEiJ_G0033682) #22	Atp1b3 (MGP_SPRETEiJ_G0033681) #24	Tfdp2 (MGP_SPRETEiJ_G0033680) #26	Gk5 (MGP_SPRETEiJ_G0033679) #27	Xrn1 (MGP_SPRETEiJ_G0033678) #28	Atr (MGP_SPRETEiJ_G0033677) #29	Pls1 (MGP_SPRETEiJ_G0033676) #30	Trpc1 (MGP_SPRETEiJ_G0033675) #31	Pcolce2 (MGP_SPRETEiJ_G0033674) #32	Paqr9 (MGP_SPRETEiJ_G0033673) #33	U2surp (MGP_SPRETEiJ_G0033672) #34	Chst2 (MGP_SPRETEiJ_G0033671) #35	Slc9a9 (MGP_SPRETEiJ_G0033670) #37	Dipk2a (MGP_SPRETEiJ_G0033669)	Plod2 (MGP_SPRETEiJ_G0033668)	Plscr4 (MGP_SPRETEiJ_G0033667)
Steppe mouse	MODERN SPECIES	3236	ENSMSIG00000025098	Spata13 (ENSMSIG00000025007)	ENSMSIG00000025002	C1qtnf9 (ENSMSIG00000024999)	Mipep (ENSMSIG00000024958)	Tnfrsf19 (ENSMSIG00000024914)	ENSMSIG00000024911	ENSMSIG00000024904	Sacs (ENSMSIG00000024830)	Sgcg (ENSMSIG00000024802)	Arl11 (ENSMSIG00000024796)	Ebpl (ENSMSIG00000024778)	Kpna3 (ENSMSIG00000024762)	ENSMSIG00000024756	ENSMSIG00000024738	ENSMSIG00000024726 #22	Trim13 (ENSMSIG00000024724)	Kcnrg (ENSMSIG00000024715)	Dleu7 (ENSMSIG00000024662)	Rnaseh2b (ENSMSIG00000024632)	Gucy1b2 (ENSMSIG00000024593)
Mouse	MODERN SPECIES	18	Prr23a2 (ENSMUSG00000063058)	Prr23a1 (ENSMUSG00000091080)	Mrps22 (ENSMUSG00000032459)	Copb2 (ENSMUSG00000032458)	Rbp2 (ENSMUSG00000032454)	Rbp1 (ENSMUSG00000046402) #13	Nmnat3 (ENSMUSG00000032456) #14	Clstn2 (ENSMUSG00000032452) #15	Trim42 (ENSMUSG00000032451) #16	Slc25a36 (ENSMUSG00000032449) #17	Spsb4 (ENSMUSG00000046997) #18	Pxylp1 (ENSMUSG00000043587) #19	Zbtb38 (ENSMUSG00000040433) #20	Rasa2 (ENSMUSG00000032413) #21	Gm28729 (ENSMUSG00000099564)	Rnf7 (ENSMUSG00000051234) #22	Atp1b3 (ENSMUSG00000032412) #24	Tfdp2 (ENSMUSG00000032411) #26	Gk5 (ENSMUSG00000041440) #27	Xrn1 (ENSMUSG00000032410) #28	Atr (ENSMUSG00000032409) #29	Pls1 (ENSMUSG00000049493) #30	Trpc1 (ENSMUSG00000032839) #31	Pcolce2 (ENSMUSG00000015354) #32	Paqr9 (ENSMUSG00000064225) #33	U2surp (ENSMUSG00000032407) #34	Chst2 (ENSMUSG00000033350) #35	Slc9a9 (ENSMUSG00000031129) #37	Dipk2a (ENSMUSG00000045414)	Plod2 (ENSMUSG00000032374)	Plscr4 (ENSMUSG00000032377)
Mus_B	ANCESTRAL SPECIES																	ENSGT00940000155481.r #22
Mus_C	ANCESTRAL SPECIES	23	ENSGT00390000007772.e.h.a	ENSGT00390000006095	ENSGT00900000141083.d	ENSGT00940000160165	ENSGT00940000159675 #13	ENSGT00950000183179.b.b #14	ENSGT00950000183086.a.a.b #15	ENSGT00530000064220 #16	ENSGT00940000154369.d #17	ENSGT01030000234629.C #18	ENSGT00390000016324 #19	ENSGT00940000161449 #20	ENSGT00940000158201 #21	ENSGT00940000155481.q.b #22	ENSGT00530000068221	ENSGT00940000155481.r #22	ENSGT01030000234579.A.b #24	ENSGT00940000157909.j #26	ENSGT01000000214434.A #27	ENSGT00670000098080 #28	ENSGT00940000155714 #29	ENSGT00960000192143	ENSGT00950000183097.a.b #30	ENSGT01060000248594.f #31	ENSGT00940000157649 #32	ENSGT00940000162334 #33	ENSGT00390000010687.a.a #34	ENSGT00940000161292 #35	ENSGT00940000160094 #37	ENSGT00520000055625.b	ENSGT01030000234558.A.a.b
Steppe mouse	DUPLICATION
Steppe mouse	MODERN SPECIES	3378	ENSMSIG00000015144 #13	Nmnat3 (ENSMSIG00000015178) #14	Clstn2 (ENSMSIG00000015272) #15	Trim42 (ENSMSIG00000015370) #16	ENSMSIG00000015401	Slc25a36 (ENSMSIG00000015406) #17	Spsb4 (ENSMSIG00000015457) #18	ENSMSIG00000015465	Pxylp1 (ENSMSIG00000015485) #19	ENSMSIG00000015549	ENSMSIG00000015553	ENSMSIG00000015558	Zbtb38 (ENSMSIG00000015564) #20	Rasa2 (ENSMSIG00000015576) #21	Gm28729 (ENSMSIG00000015659)	ENSMSIG00000015688 #22	Atp1b3 (ENSMSIG00000015722) #24	Tfdp2 (ENSMSIG00000015771) #26	ENSMSIG00000015907 #27	Xrn1 (ENSMSIG00000016035) #28	Atr (ENSMSIG00000016256) #29	ENSMSIG00000016478	Pls1 (ENSMSIG00000016487) #30	Trpc1 (ENSMSIG00000016555) #31	ENSMSIG00000016620 #32	ENSMSIG00000016681	U2surp (ENSMSIG00000016694) #34	Chst2 (ENSMSIG00000016958) #35	Slc9a9 (ENSMSIG00000016991) #37	ENSMSIG00000017003	ENSMSIG00000017017
Steppe mouse	MODERN SPECIES	2409															ENSMSIG00000030602	ENSMSIG00000030599 #22
Laurasiatheria	ANCESTRAL SPECIES	2	ENSGT00940000157522	ENSGT00940000162075	ENSGT00390000007772	ENSGT00390000006095	ENSGT00900000141083.d	ENSGT00940000160165	ENSGT00940000159675 #13	ENSGT00950000183179.b.b #14	ENSGT00950000183086.a.a.b #15	ENSGT00530000064220 #16	ENSGT00940000154369.d #17	ENSGT01030000234629.C #18	ENSGT00390000016324 #19	ENSGT00940000161449 #20	ENSGT00940000158201 #21	ENSGT00940000155481 #22	ENSGT00940000160511 #23	ENSGT01030000234579.A.b #24	ENSGT00910000147942	ENSGT00940000157909 #26	ENSGT01000000214434.A #27	ENSGT00670000098080 #28	ENSGT00940000155714 #29	ENSGT00950000183097.a.b #30	ENSGT01060000248594.f #31	ENSGT00940000157649 #32	ENSGT00940000162334 #33	ENSGT00390000010687.a.a #34	ENSGT00940000161292 #35	ENSGT00940000160094 #37	ENSGT00520000055625.b
Eulipotyphla	ANCESTRAL SPECIES																	ENSGT00940000155481 #22
Common shrew	MODERN SPECIES	1090																RNF7 (ENSSARG00000000055) #22
Laurasiatheria_a	ANCESTRAL SPECIES	3	ENSGT00940000157522	ENSGT00940000162075	ENSGT00390000007772	ENSGT00390000006095	ENSGT00900000141083.d	ENSGT00940000160165	ENSGT00940000159675 #13	ENSGT00950000183179.b.b #14	ENSGT00950000183086.a.a.b #15	ENSGT00530000064220 #16	ENSGT00940000154369.d #17	ENSGT01030000234629.C #18	ENSGT00390000016324 #19	ENSGT00940000161449 #20	ENSGT00940000158201 #21	ENSGT00940000155481 #22	ENSGT00940000160511 #23	ENSGT01030000234579.A.b #24	ENSGT00910000147942	ENSGT00940000157909 #26	ENSGT01000000214434.A #27	ENSGT00670000098080 #28	ENSGT00940000155714 #29	ENSGT00950000183097.a.b #30	ENSGT01060000248594.f #31	ENSGT00940000157649 #32	ENSGT00940000162334 #33	ENSGT00390000010687.a.a #34	ENSGT00940000161292 #35	ENSGT00940000160094 #37	ENSGT00520000055625.b
Artiodactyla	ANCESTRAL SPECIES	2	ENSGT00940000162075	ENSGT00390000007772.db	ENSGT00390000007772.eb	ENSGT00390000006095	ENSGT00900000141083.d	ENSGT00940000160165	ENSGT00940000159675 #13	ENSGT00950000183179.b.b #14	ENSGT00950000183086.a.a.b #15	ENSGT00530000064220 #16	ENSGT00940000154369.d #17	ENSGT01030000234629.C #18	ENSGT00390000016324 #19	ENSGT00940000161449 #20	ENSGT00940000158201 #21	ENSGT00940000155481 #22	ENSGT00940000160511 #23	ENSGT01030000234579.A.b #24	ENSGT00910000147942	ENSGT00940000157909 #26	ENSGT01000000214434.A #27	ENSGT00670000098080 #28	ENSGT00940000155714 #29	ENSGT00950000183097.a.b #30	ENSGT01060000248594.f #31	ENSGT00940000157649 #32	ENSGT00940000162334 #33	ENSGT00390000010687.a.a #34	ENSGT00940000161292 #35	ENSGT00940000160094 #37	ENSGT00520000055625.b
Suina	ANCESTRAL SPECIES	1	ENSGT00940000162075	ENSGT00390000007772.db.a	ENSGT00390000007772.eb	ENSGT00390000006095	ENSGT00900000141083.d	ENSGT00940000160165	ENSGT00940000159675 #13	ENSGT00950000183179.b.b #14	ENSGT00950000183086.a.a.b #15	ENSGT00530000064220 #16	ENSGT00940000154369.d #17	ENSGT01030000234629.C #18	ENSGT00390000016324 #19	ENSGT00940000161449 #20	ENSGT00940000158201 #21	ENSGT00940000155481 #22	ENSGT00940000160511 #23	ENSGT01030000234579.A.b #24	ENSGT00940000157909 #26	ENSGT01000000214434.A #27	ENSGT00670000098080 #28	ENSGT00940000155714 #29	ENSGT00950000183097.a.b #30	ENSGT01060000248594.f #31	ENSGT00940000157649 #32	ENSGT00940000162334 #33	ENSGT00390000010687.a.a #34	ENSGT00940000161292 #35	ENSGT00940000160094 #37	ENSGT00520000055625.b	ENSGT01030000234558.A.a.b
Pig	MODERN SPECIES	4	ENSSSCG00000057835	ENSSSCG00000049490	MRPS22 (ENSSSCG00000035771)	COPB2 (ENSSSCG00000011662)	RBP2 (ENSSSCG00000011663)	RBP1 (ENSSSCG00000011664) #13	NMNAT3 (ENSSSCG00000031142) #14	CLSTN2 (ENSSSCG00000011666) #15	TRIM42 (ENSSSCG00000011668) #16	SLC25A36 (ENSSSCG00000036855) #17	SPSB4 (ENSSSCG00000034369) #18	PXYLP1 (ENSSSCG00000011670) #19	ZBTB38 (ENSSSCG00000022073) #20	RASA2 (ENSSSCG00000011672) #21	ENSSSCG00000041863	RNF7 (ENSSSCG00000029774) #22	GRK7 (ENSSSCG00000011675) #23	ENSSSCG00000011676 #24	TFDP2 (ENSSSCG00000037647) #26	ENSSSCG00000036302	ENSSSCG00000058234	ENSSSCG00000048998	ENSSSCG00000034370	ENSSSCG00000046587	GK5 (ENSSSCG00000011677) #27	XRN1 (ENSSSCG00000011678) #28	ATR (ENSSSCG00000011679) #29	PLS1 (ENSSSCG00000011680) #30	TRPC1 (ENSSSCG00000011681) #31	PCOLCE2 (ENSSSCG00000011683) #32	PAQR9 (ENSSSCG00000060874) #33
Chacoan peccary	MODERN SPECIES	944																RNF7 (ENSCWAG00000011696) #22	GRK7 (ENSCWAG00000011750) #23	ENSCWAG00000011803	TFDP2 (ENSCWAG00000011892) #26	GK5 (ENSCWAG00000012678) #27	XRN1 (ENSCWAG00000012884) #28	ATR (ENSCWAG00000013082) #29	PLS1 (ENSCWAG00000014000) #30	TRPC1 (ENSCWAG00000014130) #31	PCOLCE2 (ENSCWAG00000014366) #32	PAQR9 (ENSCWAG00000014421) #33	U2SURP (ENSCWAG00000014436) #34	CHST2 (ENSCWAG00000014501) #35	SLC9A9 (ENSCWAG00000014518) #37	DIPK2A (ENSCWAG00000014557)	ENSCWAG00000014638
Artiodactyla_a	ANCESTRAL SPECIES	8	ENSGT00940000162075	ENSGT00390000007772.db	ENSGT00390000007772.eb	ENSGT00390000006095	ENSGT00900000141083.d	ENSGT00940000160165	ENSGT00940000159675 #13	ENSGT00950000183179.b.b #14	ENSGT00950000183086.a.a.b #15	ENSGT00530000064220 #16	ENSGT00940000154369.d #17	ENSGT01030000234629.C #18	ENSGT00390000016324 #19	ENSGT00940000161449 #20	ENSGT00940000158201 #21	ENSGT00940000155481 #22	ENSGT00940000160511 #23	ENSGT01030000234579.A.b #24	ENSGT00940000157909 #26	ENSGT01000000214434.A #27	ENSGT00670000098080 #28	ENSGT00940000155714 #29	ENSGT00950000183097.a.b #30	ENSGT01060000248594.f #31	ENSGT00940000157649 #32	ENSGT00940000162334 #33	ENSGT00390000010687.a.a #34	ENSGT00940000161292 #35	ENSGT00940000160094 #37	ENSGT00520000055625.b	ENSGT01030000234558.A.a.b
Artiodactyla_b	ANCESTRAL SPECIES	6	ENSGT00390000007772.db.c	ENSGT00390000007772.db.d	ENSGT00390000007772.eb	ENSGT00390000006095	ENSGT00900000141083.d	ENSGT00940000160165	ENSGT00940000159675 #13	ENSGT00950000183179.b.b #14	ENSGT00950000183086.a.a.b #15	ENSGT00530000064220 #16	ENSGT00940000154369.d #17	ENSGT01030000234629.C #18	ENSGT00390000016324 #19	ENSGT00940000161449 #20	ENSGT00940000158201 #21	ENSGT00940000155481 #22	ENSGT00940000160511 #23	ENSGT01030000234579.A.b #24	ENSGT00990000212240	ENSGT00940000157909 #26	ENSGT01000000214434.A #27	ENSGT00670000098080 #28	ENSGT00940000155714 #29	ENSGT00950000183097.a.b #30	ENSGT01060000248594.f #31	ENSGT00940000157649 #32	ENSGT00940000162334 #33	ENSGT00390000010687.a.a #34	ENSGT00940000161292 #35	ENSGT00940000160094 #37	ENSGT00520000055625.b
Pecora	ANCESTRAL SPECIES	8	ENSGT00390000007772.db.c.c	ENSGT00390000007772.db.d	ENSGT00390000007772.eb	ENSGT00390000006095	ENSGT00900000141083.d	ENSGT00940000160165	ENSGT00940000159675 #13	ENSGT00950000183179.b.b #14	ENSGT00950000183086.a.a.b #15	ENSGT00530000064220 #16	ENSGT00940000154369.d #17	ENSGT01030000234629.C #18	ENSGT00390000016324 #19	ENSGT00940000161449 #20	ENSGT00940000158201 #21	ENSGT00940000155481 #22	ENSGT00940000160511 #23	ENSGT01030000234579.A.b.eb #24	ENSGT00390000018318.u.b.a.b.a.a.b	ENSGT00990000212240	ENSGT00940000157909 #26	ENSGT01000000214434.A #27	ENSGT00670000098080 #28	ENSGT00940000155714 #29	ENSGT00950000183097.a.b #30	ENSGT01060000248594.f #31	ENSGT00940000157649 #32	ENSGT00940000162334 #33	ENSGT00390000010687.a.a #34	ENSGT00940000161292 #35	ENSGT00940000160094 #37
Percora_a	ANCESTRAL SPECIES	7	ENSGT00390000007772.db.d	ENSGT00390000007772.eb	ENSGT00390000006095	ENSGT00900000141083.d	ENSGT00940000160165	ENSGT00940000159675 #13	ENSGT00950000183179.b.b #14	ENSGT00950000183086.a.a.b #15	ENSGT00530000064220 #16	ENSGT00940000154369.d.a #17	ENSGT01030000234629.C #18	ENSGT00910000144184.r	ENSGT00390000016324 #19	ENSGT00940000161449 #20	ENSGT00940000158201 #21	ENSGT00940000155481 #22	ENSGT00940000160511 #23	ENSGT01030000234579.A.b.eb #24	ENSGT00390000018318.u.b.a.b.a.a.b	ENSGT00990000212240	ENSGT00940000157909 #26	ENSGT01000000214434.A #27	ENSGT00670000098080 #28	ENSGT00940000155714 #29	ENSGT00950000183097.a.b #30	ENSGT01060000248594.f #31	ENSGT00940000157649 #32	ENSGT00940000162334 #33	ENSGT00390000010687.a.a #34	ENSGT00940000161292 #35	ENSGT00940000160094 #37
Bovidae	ANCESTRAL SPECIES	9	ENSGT00390000007772.db.d	ENSGT00390000007772.eb	ENSGT00390000006095	ENSGT00900000141083.d	ENSGT00940000160165	ENSGT00940000159675 #13	ENSGT00950000183179.b.b #14	ENSGT00950000183086.a.a.b #15	ENSGT00530000064220 #16	ENSGT00940000154369.d.a #17	ENSGT01030000234629.C #18	ENSGT00910000144184.r	ENSGT00390000016324 #19	ENSGT00940000161449 #20	ENSGT00940000158201 #21	ENSGT00940000155481 #22	ENSGT00940000160511 #23	ENSGT01030000234579.A.b.eb #24	ENSGT00910000147942.a	ENSGT00940000157909 #26	ENSGT01000000214434.A #27	ENSGT00670000098080 #28	ENSGT00940000155714 #29	ENSGT00950000183097.a.b #30	ENSGT01060000248594.f #31	ENSGT00940000157649 #32	ENSGT00940000162334 #33	ENSGT00390000010687.a.a #34	ENSGT00940000161292 #35	ENSGT00940000160094 #37	ENSGT00520000055625.b
Bovinae	ANCESTRAL SPECIES	6	ENSGT00390000007772.eb	ENSGT00390000006095	ENSGT00900000141083.d	ENSGT00940000160165	ENSGT00940000159675 #13	ENSGT00950000183179.b.b #14	ENSGT00950000183086.a.a.b #15	ENSGT00530000064220 #16	ENSGT00940000154369.d.a #17	ENSGT01030000234629.C #18	ENSGT00910000144184.r	ENSGT00390000016324 #19	ENSGT00940000161449 #20	ENSGT00940000158201 #21	ENSGT00940000171658.a	ENSGT00940000155481 #22	ENSGT00940000160511 #23	ENSGT01030000234579.A.b.eb #24	ENSGT00910000147942.a	ENSGT00940000157909 #26	ENSGT01000000214434.A #27	ENSGT00670000098080 #28	ENSGT00940000155714 #29	ENSGT00950000183097.a.b #30	ENSGT01060000248594.f #31	ENSGT00940000157649 #32	ENSGT00940000153096.b.c.b.b.a.a.a.a.a.a.a	ENSGT00940000162334 #33	ENSGT00390000010687.a.a #34	ENSGT00940000161292 #35	ENSGT00940000160094 #37
Bos	ANCESTRAL SPECIES	7	ENSGT00390000007772.eb	ENSGT00390000006095	ENSGT00900000141083.d	ENSGT00940000160165	ENSGT00940000159675 #13	ENSGT00950000183179.b.b #14	ENSGT00950000183086.a.a.b #15	ENSGT00530000064220 #16	ENSGT00940000154369.d.a #17	ENSGT01030000234629.C #18	ENSGT00910000144184.r	ENSGT00390000016324 #19	ENSGT00940000161449 #20	ENSGT00940000158201 #21	ENSGT00940000171658.a	ENSGT00940000155481 #22	ENSGT00940000160511 #23	ENSGT00910000147942.a	ENSGT00940000157909 #26	ENSGT01000000214434.A #27	ENSGT00670000098080 #28	ENSGT00940000155714 #29	ENSGT00950000183097.a.b #30	ENSGT01060000248594.f #31	ENSGT00940000157649 #32	ENSGT00940000153096.b.c.b.b.a.a.a.a.a.a.a	ENSGT00940000162334 #33	ENSGT00390000010687.a.a #34	ENSGT00940000161292 #35	ENSGT00940000160094 #37	ENSGT00520000055625.b
Bos_b	ANCESTRAL SPECIES	5	ENSGT00390000007772.db.d.h	ENSGT00390000007772.eb	ENSGT00390000006095	ENSGT00900000141083.d	ENSGT00940000160165	ENSGT00940000159675 #13	ENSGT00950000183179.b.b #14	ENSGT00950000183086.a.a.b #15	ENSGT00530000064220 #16	ENSGT00940000154369.d.a #17	ENSGT01030000234629.C #18	ENSGT00910000144184.r	ENSGT00390000016324 #19	ENSGT00940000161449 #20	ENSGT00940000158201 #21	ENSGT00940000155481 #22	ENSGT00940000160511 #23	ENSGT01030000234579.A.b.eb #24	ENSGT00390000018318.u.b.a.b.a.a.b	ENSGT00940000157909 #26	ENSGT01000000214434.A #27	ENSGT00670000098080 #28	ENSGT00940000155714 #29	ENSGT00950000183097.a.b #30	ENSGT01060000248594.f #31	ENSGT00940000157649 #32	ENSGT00940000153096.b.c.b.b.a.a.a.a.a.a.a	ENSGT00940000162334 #33	ENSGT00390000010687.a.a #34	ENSGT00940000161292 #35	ENSGT00940000160094 #37
Cow	MODERN SPECIES		ENSBTAG00000046040	MRPS22 (ENSBTAG00000047608)	COPB2 (ENSBTAG00000014843)	RBP2 (ENSBTAG00000015056)	RBP1 (ENSBTAG00000020028) #13	NMNAT3 (ENSBTAG00000051936) #14	CLSTN2 (ENSBTAG00000008714) #15	TRIM42 (ENSBTAG00000018346) #16	ENSBTAG00000052041	SLC25A36 (ENSBTAG00000015310) #17	SPSB4 (ENSBTAG00000009115) #18	ENSBTAG00000050470	PXYLP1 (ENSBTAG00000050763) #19	ZBTB38 (ENSBTAG00000040061) #20	RASA2 (ENSBTAG00000015413) #21	RNF7 (ENSBTAG00000002185) #22	GRK7 (ENSBTAG00000021886) #23	ATP1B3 (ENSBTAG00000014140) #24	ENSBTAG00000019007	TFDP2 (ENSBTAG00000006222) #26	GK5 (ENSBTAG00000018138) #27	XRN1 (ENSBTAG00000011524) #28	ATR (ENSBTAG00000011529) #29	PLS1 (ENSBTAG00000023429) #30	TRPC1 (ENSBTAG00000002232) #31	PCOLCE2 (ENSBTAG00000016026) #32	ENSBTAG00000038111	PAQR9 (ENSBTAG00000011116) #33	U2SURP (ENSBTAG00000009154) #34	CHST2 (ENSBTAG00000011584) #35	ENSBTAG00000054067
Hybrid Bos Indicus	MODERN SPECIES		ENSBIXG00005029080	ENSBIXG00005005148	ENSBIXG00005029095	MRPS22 (ENSBIXG00005005189)	COPB2 (ENSBIXG00005001816)	RBP2 (ENSBIXG00005001783)	ENSBIXG00005029214 #14	CLSTN2 (ENSBIXG00005029240) #15	TRIM42 (ENSBIXG00005001565) #16	SLC25A36 (ENSBIXG00005001539) #17	SPSB4 (ENSBIXG00005001522) #18	ENSBIXG00005005286	PXYLP1 (ENSBIXG00005029247) #19	ZBTB38 (ENSBIXG00005005290) #20	RASA2 (ENSBIXG00005005293) #21	RNF7 (ENSBIXG00005005297) #22	GRK7 (ENSBIXG00005029666) #23	ATP1B3 (ENSBIXG00005029659) #24	ENSBIXG00005029647	ENSBIXG00005029643	TFDP2 (ENSBIXG00005029603) #26	GK5 (ENSBIXG00005029572) #27	ENSBIXG00005029562	XRN1 (ENSBIXG00005029509) #28	ATR (ENSBIXG00005029438) #29	PLS1 (ENSBIXG00005029412) #30	TRPC1 (ENSBIXG00005029391) #31	PCOLCE2 (ENSBIXG00005029362) #32	ENSBIXG00005029331	PAQR9 (ENSBIXG00005029326) #33	U2SURP (ENSBIXG00005029299) #34
Bos_a	ANCESTRAL SPECIES	5	ENSGT00390000007772.eb	ENSGT00390000006095	ENSGT00900000141083.d.a	ENSGT00940000160165	ENSGT00940000159675 #13	ENSGT00950000183179.b.b #14	ENSGT00950000183086.a.a.b #15	ENSGT00530000064220 #16	ENSGT00940000154369.c.a ##17	ENSGT01030000234629.C #18	ENSGT00910000144184.r	ENSGT00390000016324 #19	ENSGT00940000161449 #20	ENSGT00940000158201 #21	ENSGT00940000171658.a	ENSGT00940000155481 #22	ENSGT00940000160511 #23	ENSGT01030000234579.A.b.eb #24	ENSGT00390000018318.u.b.a.b.a.a.b	ENSGT00940000157909 #26	ENSGT01000000214434.A #27	ENSGT00670000098080 #28	ENSGT00940000155714 #29	ENSGT00950000183097.a.b #30	ENSGT01060000248594.f #31	ENSGT00940000157649 #32	ENSGT00940000153096.b.c.b.b.a.a.a.a.a.a.a	ENSGT00940000162334 #33	ENSGT00390000010687.a.a #34	ENSGT00940000161292 #35	ENSGT00940000160094 #37
Domestic yak	MODERN SPECIES		ENSBGRG00000001602	ENSBGRG00000001595	MRPS22 (ENSBGRG00000001541)	ENSBGRG00000001520	RBP2 (ENSBGRG00000001501)	NMNAT3 (ENSBGRG00000001428) #14	CLSTN2 (ENSBGRG00000001375) #15	TRIM42 (ENSBGRG00000001357) #16	ENSBGRG00000001349	SLC25A36 (ENSBGRG00000001317) ##17	SPSB4 (ENSBGRG00000001297) #18	ENSBGRG00000001284	PXYLP1 (ENSBGRG00000001263) #19	ZBTB38 (ENSBGRG00000001246) #20	RASA2 (ENSBGRG00000001166) #21	RNF7 (ENSBGRG00000001134) #22	GRK7 (ENSBGRG00000001107) #23	ATP1B3 (ENSBGRG00000001064) #24	ENSBGRG00000001057	TFDP2 (ENSBGRG00000001010) #26	GK5 (ENSBGRG00000000970) #27	XRN1 (ENSBGRG00000000705) #28	ATR (ENSBGRG00000000428) #29	PLS1 (ENSBGRG00000000350) #30	TRPC1 (ENSBGRG00000000286) #31	PCOLCE2 (ENSBGRG00000000254) #32	PAQR9 (ENSBGRG00000000229) #33	U2SURP (ENSBGRG00000000223) #34	CHST2 (ENSBGRG00000000218) #35	ENSBGRG00000000212	ENSBGRG00000000206
Wild yak	MODERN SPECIES	182												PXYLP1 (ENSBMUG00000020857) #19	ZBTB38 (ENSBMUG00000020833) #20	RASA2 (ENSBMUG00000020801) #21	ENSBMUG00000020763	RNF7 (ENSBMUG00000020720) #22	GRK7 (ENSBMUG00000020702) #23	ENSBMUG00000020679	ENSBMUG00000020675	TFDP2 (ENSBMUG00000020653) #26	GK5 (ENSBMUG00000020565) #27	XRN1 (ENSBMUG00000020548) #28	ATR (ENSBMUG00000020470) #29	PLS1 (ENSBMUG00000020434) #30	TRPC1 (ENSBMUG00000020407) #31	PCOLCE2 (ENSBMUG00000020376) #32	ENSBMUG00000020362	PAQR9 (ENSBMUG00000020355) #33	U2SURP (ENSBMUG00000020347) #34	CHST2 (ENSBMUG00000020326) #35	SLC9A9 (ENSBMUG00000020313) #37
American bison	MODERN SPECIES	3298	ENSBBBG00000016176	MRPS22 (ENSBBBG00000016196)	COPB2 (ENSBBBG00000016249)	RBP2 (ENSBBBG00000016260)	ENSBBBG00000016274 #13	NMNAT3 (ENSBBBG00000016315) #14	CLSTN2 (ENSBBBG00000016341) #15	TRIM42 (ENSBBBG00000016347) #16	ENSBBBG00000016376 #17	SPSB4 (ENSBBBG00000008334) #18	ENSBBBG00000004054	PXYLP1 (ENSBBBG00000016417) #19	ZBTB38 (ENSBBBG00000016426) #20	RASA2 (ENSBBBG00000016517) #21	ENSBBBG00000016540	RNF7 (ENSBBBG00000004080) #22	GRK7 (ENSBBBG00000016561) #23	ATP1B3 (ENSBBBG00000016573) #24	ENSBBBG00000016579	ENSBBBG00000004088	TFDP2 (ENSBBBG00000016664) #26	GK5 (ENSBBBG00000016698) #27	XRN1 (ENSBBBG00000009064) #28	ATR (ENSBBBG00000008122) #29	PLS1 (ENSBBBG00000017029) #30	TRPC1 (ENSBBBG00000008340) #31	PCOLCE2 (ENSBBBG00000017158) #32	ENSBBBG00000017165	PAQR9 (ENSBBBG00000004249) #33	U2SURP (ENSBBBG00000017226) #34	CHST2 (ENSBBBG00000017229) #35
Caprinae	ANCESTRAL SPECIES	8	ENSGT00390000007364	ENSGT00940000157522	ENSGT00390000007772.eb	ENSGT00390000006095	ENSGT00900000141083.d	ENSGT00940000160165	ENSGT00940000159675 #13	ENSGT00950000183179.b.b #14	ENSGT00950000183086.a.a.b #15	ENSGT00530000064220 #16	ENSGT00940000154369.d.a #17	ENSGT01030000234629.C #18	ENSGT00390000016324 #19	ENSGT00940000161449 #20	ENSGT00940000158201 #21	ENSGT00940000155481 #22	ENSGT00940000160511 #23	ENSGT01030000234579.A.b.eb.b #24	ENSGT00940000157909 #26	ENSGT01000000214434.A #27	ENSGT00670000098080 #28	ENSGT00940000155714 #29	ENSGT00950000183097.a.b #30	ENSGT01060000248594.f #31	ENSGT00940000157649 #32	ENSGT00940000162334 #33	ENSGT00390000010687.a.a #34	ENSGT00940000161292 #35	ENSGT00940000160094 #37	ENSGT00520000055625.b	ENSGT01030000234558.A.a.b
Rambouillet Sheep	MODERN SPECIES		ENSOARG00020010633	ENSOARG00020010569	MRPS22 (ENSOARG00020010500)	COPB2 (ENSOARG00020010262)	RBP2 (ENSOARG00020010203)	RBP1 (ENSOARG00020010135) #13	NMNAT3 (ENSOARG00020009718) #14	CLSTN2 (ENSOARG00020009535) #15	TRIM42 (ENSOARG00020009485) #16	ENSOARG00020009460	SLC25A36 (ENSOARG00020009173) #17	SPSB4 (ENSOARG00020009123) #18	PXYLP1 (ENSOARG00020008991) #19	ZBTB38 (ENSOARG00020008974) #20	RASA2 (ENSOARG00020008530) #21	RNF7 (ENSOARG00020008414) #22	GRK7 (ENSOARG00020008372) #23	ATP1B3 (ENSOARG00020008329) #24	ENSOARG00020008278	ENSOARG00020008237	TFDP2 (ENSOARG00020007870) #26	ENSOARG00020007831	GK5 (ENSOARG00020007690) #27	XRN1 (ENSOARG00020007309) #28	ATR (ENSOARG00020006427) #29	ENSOARG00020006395	PLS1 (ENSOARG00020006303) #30	TRPC1 (ENSOARG00020006181) #31	PCOLCE2 (ENSOARG00020006072) #32	PAQR9 (ENSOARG00020006055) #33	U2SURP (ENSOARG00020005741) #34
Goat	MODERN SPECIES		PIK3CB (ENSCHIG00000019728)	ENSCHIG00000015101	MRPS22 (ENSCHIG00000027042)	COPB2 (ENSCHIG00000022228)	RBP2 (ENSCHIG00000027152)	RBP1 (ENSCHIG00000020909) #13	NMNAT3 (ENSCHIG00000026289) #14	CLSTN2 (ENSCHIG00000022240) #15	TRIM42 (ENSCHIG00000015242) #16	ENSCHIG00000022243 #17	SPSB4 (ENSCHIG00000008629) #18	ENSCHIG00000020425	PXYLP1 (ENSCHIG00000025350) #19	ZBTB38 (ENSCHIG00000010094) #20	RASA2 (ENSCHIG00000002573) #21	RNF7 (ENSCHIG00000013336) #22	GRK7 (ENSCHIG00000012094) #23	ENSCHIG00000027094 #24	ENSCHIG00000017443	TFDP2 (ENSCHIG00000009621) #26	GK5 (ENSCHIG00000017817) #27	XRN1 (ENSCHIG00000019192) #28	ATR (ENSCHIG00000021916) #29	PLS1 (ENSCHIG00000007676) #30	TRPC1 (ENSCHIG00000020690) #31	PCOLCE2 (ENSCHIG00000024199) #32	PAQR9 (ENSCHIG00000009825) #33	U2SURP (ENSCHIG00000023892) #34	CHST2 (ENSCHIG00000010707) #35	SLC9A9 (ENSCHIG00000013168) #37	DIPK2A (ENSCHIG00000018908)
Siberian musk deer	MODERN SPECIES	1183	ENSMMSG00000007696	ENSMMSG00000007679	ENSMMSG00000007660	MRPS22 (ENSMMSG00000007623)	COPB2 (ENSMMSG00000007584)	RBP2 (ENSMMSG00000007546)	RBP1 (ENSMMSG00000007523) #13	NMNAT3 (ENSMMSG00000007475) #14	CLSTN2 (ENSMMSG00000007374) #15	TRIM42 (ENSMMSG00000007340) #16	SLC25A36 (ENSMMSG00000007138) #17	SPSB4 (ENSMMSG00000007102) #18	ENSMMSG00000007071	PXYLP1 (ENSMMSG00000006978) #19	RASA2 (ENSMMSG00000006905) #21	RNF7 (ENSMMSG00000006837) #22	GRK7 (ENSMMSG00000006798) #23	ENSMMSG00000006771 #24	ENSMMSG00000006756	ENSMMSG00000006733	TFDP2 (ENSMMSG00000006589) #26	GK5 (ENSMMSG00000006474) #27	XRN1 (ENSMMSG00000006235) #28	ATR (ENSMMSG00000006162) #29	PLS1 (ENSMMSG00000006112) #30	TRPC1 (ENSMMSG00000006046) #31	PCOLCE2 (ENSMMSG00000005995) #32	PAQR9 (ENSMMSG00000005982) #33	U2SURP (ENSMMSG00000005820) #34	CHST2 (ENSMMSG00000005775) #35	SLC9A9 (ENSMMSG00000005673) #37
Yarkand deer	MODERN SPECIES	10	ENSCHYG00000025687	ENSCHYG00000025659	MRPS22 (ENSCHYG00000025593)	COPB2 (ENSCHYG00000025389)	RBP2 (ENSCHYG00000025312)	RBP1 (ENSCHYG00000025267) #13	ENSCHYG00000025250 #14	CLSTN2 (ENSCHYG00000025188) #15	TRIM42 (ENSCHYG00000025165) #16	ENSCHYG00000025156	SLC25A36 (ENSCHYG00000025011) #17	SPSB4 (ENSCHYG00000024998) #18	PXYLP1 (ENSCHYG00000024922) #19	ZBTB38 (ENSCHYG00000024909) #20	RASA2 (ENSCHYG00000024595) #21	RNF7 (ENSCHYG00000024540) #22	GRK7 (ENSCHYG00000024502) #23	ENSCHYG00000024452 #24	ENSCHYG00000024429	ENSCHYG00000024409	TFDP2 (ENSCHYG00000024201) #26	GK5 (ENSCHYG00000024077) #27	XRN1 (ENSCHYG00000023362) #28	ATR (ENSCHYG00000022692) #29	PLS1 (ENSCHYG00000022526) #30	TRPC1 (ENSCHYG00000022264) #31	PCOLCE2 (ENSCHYG00000022135) #32	PAQR9 (ENSCHYG00000022114) #33	U2SURP (ENSCHYG00000021811) #34	CHST2 (ENSCHYG00000021770) #35	SLC9A9 (ENSCHYG00000021601) #37
Cetacea	ANCESTRAL SPECIES	10	ENSGT00940000157522	ENSGT00940000162075	ENSGT00390000007772.eb	ENSGT00390000006095	ENSGT00900000141083.d	ENSGT00940000160165	ENSGT00940000159675 #13	ENSGT00950000183179.b.b #14	ENSGT00950000183086.a.a.b #15	ENSGT00530000064220 #16	ENSGT00940000154369.d #17	ENSGT01030000234629.C #18	ENSGT00390000016324 #19	ENSGT00940000161449 #20	ENSGT00940000158201 #21	ENSGT00940000155481 #22	ENSGT00940000160511 #23	ENSGT01030000234579.A.b #24	ENSGT00990000212240	ENSGT00940000157909 #26	ENSGT01000000214434.A #27	ENSGT00670000098080 #28	ENSGT00940000155714 #29	ENSGT00950000183097.a.b #30	ENSGT01060000248594.f #31	ENSGT00940000157649 #32	ENSGT00940000162334 #33	ENSGT00390000010687.a.a #34	ENSGT00940000161292 #35	ENSGT00940000160094 #37	ENSGT00520000055625.b
Odontoceti	ANCESTRAL SPECIES	9	ENSGT00390000007364	ENSGT00940000157522	ENSGT00940000162075	ENSGT00390000006095	ENSGT00900000141083.d	ENSGT00940000160165	ENSGT00940000159675 #13	ENSGT00950000183179.b.b #14	ENSGT00950000183086.a.a.b #15	ENSGT00530000064220 #16	ENSGT00940000154369.d #17	ENSGT01030000234629.C #18	ENSGT00390000016324 #19	ENSGT00940000161449 #20	ENSGT00940000158201 #21	ENSGT00940000155481 #22	ENSGT00940000160511 #23	ENSGT01030000234579.A.b #24	ENSGT00990000212240	ENSGT00940000157909 #26	ENSGT01000000214434.A #27	ENSGT00670000098080 #28	ENSGT00940000155714 #29	ENSGT00950000183097.a.b #30	ENSGT01060000248594.f #31	ENSGT00940000157649 #32	ENSGT00940000162334 #33	ENSGT00390000010687.a.a #34	ENSGT00940000161292 #35	ENSGT00940000160094 #37	ENSGT00520000055625.b
Odontoceti_a	ANCESTRAL SPECIES	8	ENSGT00390000007364	ENSGT00940000157522	ENSGT00940000162075	ENSGT00390000006095	ENSGT00900000141083.d	ENSGT00940000160165	ENSGT00940000159675 #13	ENSGT00950000183179.b.b #14	ENSGT00950000183086.a.a.b #15	ENSGT00530000064220 #16	ENSGT00940000154369.d #17	ENSGT01030000234629.C #18	ENSGT00390000016324 #19	ENSGT00940000161449 #20	ENSGT00940000158201 #21	ENSGT00940000155481 #22	ENSGT00940000160511 #23	ENSGT01030000234579.A.b #24	ENSGT00990000212240	ENSGT00940000157909 #26	ENSGT01000000214434.A #27	ENSGT00670000098080 #28	ENSGT00940000155714.f #29	ENSGT00940000155714.e #29	ENSGT00950000183097.a.b #30	ENSGT01060000248594.f #31	ENSGT00940000157649 #32	ENSGT00940000162334 #33	ENSGT00390000010687.a.a #34	ENSGT00940000161292 #35	ENSGT00940000160094 #37
Odontoceti_b	ANCESTRAL SPECIES	9	ENSGT00950000182878.b.a.c.a.a.b.o.a.a.b.a	ENSGT00940000162075	ENSGT00390000006095	ENSGT00900000141083.d	ENSGT00940000160165	ENSGT00940000159675 #13	ENSGT00950000183179.b.b #14	ENSGT00940000154937.m	ENSGT00950000183086.a.a.b #15	ENSGT00530000064220 #16	ENSGT00940000154369.d #17	ENSGT01030000234629.C #18	ENSGT00390000016324 #19	ENSGT00940000161449 #20	ENSGT00940000158201 #21	ENSGT00940000155481 #22	ENSGT00940000160511 #23	ENSGT01030000234579.A.b #24	ENSGT00510000049510.j	ENSGT00940000157909 #26	ENSGT01000000214434.A #27	ENSGT00670000098080 #28	ENSGT00940000155714.f #29	ENSGT00950000183097.a.b #30	ENSGT01060000248594.f #31	ENSGT00940000157649 #32	ENSGT00940000162334 #33	ENSGT00390000010687.a.a #34	ENSGT00940000161292 #35	ENSGT00950000183010.a.b.a.a.a.a.b	ENSGT00940000160094 #37
Monodontidae	ANCESTRAL SPECIES	23	ENSGT00390000007772.db.c.b	ENSGT00390000007772.db.c.a	ENSGT00390000006095	ENSGT00900000141083.d	ENSGT00940000160165	ENSGT00940000159675 #13	ENSGT00950000183179.b.b #14	ENSGT00940000154937.m	ENSGT00950000183086.a.a.b #15	ENSGT00530000064220 #16	ENSGT00940000154369.d #17	ENSGT01030000234629.C #18	ENSGT00390000016324 #19	ENSGT00940000161449 #20	ENSGT00940000158201 #21	ENSGT00940000155481 #22	ENSGT00940000160511 #23	ENSGT01030000234579.A.b #24	ENSGT00510000049510.j	ENSGT00990000212240	ENSGT00940000157909 #26	ENSGT01000000214434.A #27	ENSGT00670000098080 #28	ENSGT00940000155714.f #29	ENSGT00950000183097.a.b #30	ENSGT01060000248594.f #31	ENSGT00940000157649 #32	ENSGT00940000162334 #33	ENSGT00390000010687.a.a #34	ENSGT00940000161292 #35	ENSGT00940000160094 #37
Narwhal	MODERN SPECIES	297	ENSMMNG00015002267	ENSMMNG00015002255	MRPS22 (ENSMMNG00015002233)	COPB2 (ENSMMNG00015002153)	RBP2 (ENSMMNG00015002106)	RBP1 (ENSMMNG00015002084) #13	NMNAT3 (ENSMMNG00015002017) #14	ENSMMNG00015001951	CLSTN2 (ENSMMNG00015001908) #15	TRIM42 (ENSMMNG00015001882) #16	ENSMMNG00015001759 #17	SPSB4 (ENSMMNG00015001726) #18	PXYLP1 (ENSMMNG00015001696) #19	ZBTB38 (ENSMMNG00015001678) #20	RASA2 (ENSMMNG00015001646) #21	RNF7 (ENSMMNG00015001619) #22	GRK7 (ENSMMNG00015001595) #23	ENSMMNG00015001573	ATP1B3 (ENSMMNG00015001546) #24	ENSMMNG00015001532	TFDP2 (ENSMMNG00015001329) #26	GK5 (ENSMMNG00015001246) #27	XRN1 (ENSMMNG00015001039) #28	ATR (ENSMMNG00015000820) #29	PLS1 (ENSMMNG00015000766) #30	TRPC1 (ENSMMNG00015000693) #31	PCOLCE2 (ENSMMNG00015000650) #32	PAQR9 (ENSMMNG00015000630) #33	U2SURP (ENSMMNG00015000545) #34	CHST2 (ENSMMNG00015000510) #35	ENSMMNG00015000492
Beluga whale	MODERN SPECIES	18	ENSDLEG00000001031	MRPS22 (ENSDLEG00000001044)	COPB2 (ENSDLEG00000001067)	RBP2 (ENSDLEG00000001101)	RBP1 (ENSDLEG00000001122) #13	NMNAT3 (ENSDLEG00000001136) #14	ENSDLEG00000001151	CLSTN2 (ENSDLEG00000001185) #15	TRIM42 (ENSDLEG00000001364) #16	SLC25A36 (ENSDLEG00000001393) #17	SPSB4 (ENSDLEG00000001437) #18	PXYLP1 (ENSDLEG00000001445) #19	ZBTB38 (ENSDLEG00000001456) #20	RASA2 (ENSDLEG00000001473) #21	ENSDLEG00000001540	RNF7 (ENSDLEG00000001551) #22	GRK7 (ENSDLEG00000001565) #23	ATP1B3 (ENSDLEG00000001587) #24	ENSDLEG00000001620	TFDP2 (ENSDLEG00000001700) #26	ENSDLEG00000002016	GK5 (ENSDLEG00000002054) #27	XRN1 (ENSDLEG00000002314) #28	ATR (ENSDLEG00000002842) #29	ENSDLEG00000002868 #29	PLS1 (ENSDLEG00000002877) #30	TRPC1 (ENSDLEG00000002901) #31	PCOLCE2 (ENSDLEG00000002981) #32	PAQR9 (ENSDLEG00000003008) #33	U2SURP (ENSDLEG00000003020) #34	CHST2 (ENSDLEG00000003050) #35
Vaquita	MODERN SPECIES	15	ENSPSNG00000015359	ENSPSNG00000015372	ENSPSNG00000015393	MRPS22 (ENSPSNG00000015570)	COPB2 (ENSPSNG00000015632)	RBP2 (ENSPSNG00000015711)	RBP1 (ENSPSNG00000015785) #13	ENSPSNG00000015860 #14	ENSPSNG00000006348	CLSTN2 (ENSPSNG00000006409) #15	TRIM42 (ENSPSNG00000006478) #16	SLC25A36 (ENSPSNG00000006521) #17	SPSB4 (ENSPSNG00000006561) #18	ZBTB38 (ENSPSNG00000006604) #20	RASA2 (ENSPSNG00000007185) #21	RNF7 (ENSPSNG00000008117) #22	GRK7 (ENSPSNG00000008164) #23	ATP1B3 (ENSPSNG00000008203) #24	ENSPSNG00000008244	TFDP2 (ENSPSNG00000008314) #26	ENSPSNG00000008603	ENSPSNG00000008620	GK5 (ENSPSNG00000008649) #27	XRN1 (ENSPSNG00000008771) #28	ATR (ENSPSNG00000008915) #29	PLS1 (ENSPSNG00000008996) #30	TRPC1 (ENSPSNG00000009055) #31	PCOLCE2 (ENSPSNG00000009157) #32	PAQR9 (ENSPSNG00000009187) #33	ENSPSNG00000009448 #34	CHST2 (ENSPSNG00000011325) #35
Dolphin	MODERN SPECIES	2102															RASA2 (ENSTTRG00000012030) #21	RNF7 (ENSTTRG00000012033) #22	GRK7 (ENSTTRG00000012035) #23	ATP1B3 (ENSTTRG00000012038) #24	TFDP2 (ENSTTRG00000012044) #26	GK5 (ENSTTRG00000012059) #27
Sperm whale	MODERN SPECIES		MRPS22 (ENSPCTG00005000142)	ENSPCTG00005000141	ENSPCTG00005000140	ENSPCTG00005000138	ENSPCTG00005000137	ENSPCTG00005000136	ENSPCTG00005000135	FOXL2 (ENSPCTG00005000133)	CLSTN2 (ENSPCTG00005000131) #15	TRIM42 (ENSPCTG00005000130) #16	SLC25A36 (ENSPCTG00005000128) #17	SPSB4 (ENSPCTG00005000126) #18	PXYLP1 (ENSPCTG00005000125) #19	ZBTB38 (ENSPCTG00005000124) #20	RASA2 (ENSPCTG00005000123) #21	RNF7 (ENSPCTG00005000121) #22	GRK7 (ENSPCTG00005000120) #23	ATP1B3 (ENSPCTG00005000118) #24	ENSPCTG00005000117	TFDP2 (ENSPCTG00005000116) #26	GK5 (ENSPCTG00005000115) #27	XRN1 (ENSPCTG00005000114) #28	ATR (ENSPCTG00005000113) #29	PLS1 (ENSPCTG00005000112) #30	TRPC1 (ENSPCTG00005000111) #31	PCOLCE2 (ENSPCTG00005000110) #32	PAQR9 (ENSPCTG00005000109) #33	U2SURP (ENSPCTG00005000108) #34	CHST2 (ENSPCTG00005000107) #35	SLC9A9 (ENSPCTG00005000106) #37	DIPK2A (ENSPCTG00005000105)
Blue whale	DUPLICATION
Blue whale	MODERN SPECIES		CEP350 (ENSBMSG00010003998)	TOR1AIP1 (ENSBMSG00010003956)	TOR1AIP2 (ENSBMSG00010003890)	FAM163A (ENSBMSG00010003876)	TDRD5 (ENSBMSG00010003768)	NPHS2 (ENSBMSG00010003718)	AXDND1 (ENSBMSG00010003680)	SOAT1 (ENSBMSG00010003637)	ENSBMSG00010003622	ABL2 (ENSBMSG00010003214)	TOR3A (ENSBMSG00010003052)	FAM20B (ENSBMSG00010003012)	ANGPTL1 (ENSBMSG00010002994)	RALGPS2 (ENSBMSG00010002896)	ENSBMSG00010002877	ENSBMSG00010002854 #22	ENSBMSG00010002846	RASAL2 (ENSBMSG00010002799)	ENSBMSG00010002743	SEC16B (ENSBMSG00010002676)	BRINP2 (ENSBMSG00010002541)	ASTN1 (ENSBMSG00010002395)	PAPPA2 (ENSBMSG00010002276)	COP1 (ENSBMSG00010002187)	ENSBMSG00010002160	TNR (ENSBMSG00010002118)	ENSBMSG00010002103	KIAA0040 (ENSBMSG00010002025)	TNN (ENSBMSG00010001619)	ENSBMSG00010001553	CACYBP (ENSBMSG00010001520)
Blue whale	MODERN SPECIES	15	ENSBMSG00010002375	MRPS22 (ENSBMSG00010002393)	COPB2 (ENSBMSG00010002410)	ENSBMSG00010002432	RBP2 (ENSBMSG00010002440)	RBP1 (ENSBMSG00010002450) #13	NMNAT3 (ENSBMSG00010002472) #14	CLSTN2 (ENSBMSG00010002499) #15	TRIM42 (ENSBMSG00010002516) #16	SLC25A36 (ENSBMSG00010002537) #17	ENSBMSG00010002556	SPSB4 (ENSBMSG00010002565) #18	PXYLP1 (ENSBMSG00010002600) #19	ZBTB38 (ENSBMSG00010002653) #20	RASA2 (ENSBMSG00010002664) #21	RNF7 (ENSBMSG00010002685) #22	GRK7 (ENSBMSG00010002693) #23	ENSBMSG00010002711 #24	ENSBMSG00010002724	TFDP2 (ENSBMSG00010002750) #26	GK5 (ENSBMSG00010002815) #27	XRN1 (ENSBMSG00010002838) #28	ATR (ENSBMSG00010002907) #29	PLS1 (ENSBMSG00010002998) #30	TRPC1 (ENSBMSG00010003018) #31	PCOLCE2 (ENSBMSG00010003043) #32	PAQR9 (ENSBMSG00010003062) #33	U2SURP (ENSBMSG00010003077) #34	CHST2 (ENSBMSG00010003091) #35	ENSBMSG00010003096	SLC9A9 (ENSBMSG00010003106) #37
Camelidae	ANCESTRAL SPECIES		ENSGT00390000007364	ENSGT00940000157522	ENSGT00390000007772.db	ENSGT00390000007772.eb	ENSGT00390000006095	ENSGT00940000160165	ENSGT00940000159675 #13	ENSGT00950000183179.b.b #14	ENSGT00950000183086.a.a.b #15	ENSGT00530000064220 #16	ENSGT00940000154369.d #17	ENSGT01030000234629.C #18	ENSGT00390000016324 #19	ENSGT00940000161449 #20	ENSGT00940000158201 #21	ENSGT00940000155481 #22	ENSGT00940000160511 #23	ENSGT01030000234579.A.b #24	ENSGT00940000157909 #26	ENSGT01000000214434.A #27	ENSGT00670000098080 #28	ENSGT00940000155714 #29	ENSGT00950000183097.a.b #30	ENSGT01060000248594.f #31	ENSGT00940000157649 #32	ENSGT00940000162334 #33	ENSGT00390000010687.a.a #34	ENSGT00940000161292 #35	ENSGT00940000160094 #37	ENSGT00520000055625.b	ENSGT01030000234558.A.a.b
Alpaca	MODERN SPECIES	1266															RASA2 (ENSVPAG00000004682) #21	RNF7 (ENSVPAG00000004683) #22	GRK7 (ENSVPAG00000004685) #23	ATP1B3 (ENSVPAG00000004686) #24	TFDP2 (ENSVPAG00000004687) #26	GK5 (ENSVPAG00000004688) #27	XRN1 (ENSVPAG00000004690) #28	ATR (ENSVPAG00000004691) #29	PLS1 (ENSVPAG00000004693) #30	TRPC1 (ENSVPAG00000004694) #31	PCOLCE2 (ENSVPAG00000004695) #32	PAQR9 (ENSVPAG00000004696) #33	U2SURP (ENSVPAG00000004697) #34	SLC9A9 (ENSVPAG00000004698) #37
Arabian camel	MODERN SPECIES		ENSCDRG00005007675	ENSCDRG00005007870	ENSCDRG00005007910	MRPS22 (ENSCDRG00005007928)	ENSCDRG00005007972	RBP2 (ENSCDRG00005008064)	RBP1 (ENSCDRG00005008110) #13	NMNAT3 (ENSCDRG00005008148) #14	CLSTN2 (ENSCDRG00005008241) #15	TRIM42 (ENSCDRG00005008390) #16	SLC25A36 (ENSCDRG00005008462) #17	SPSB4 (ENSCDRG00005008558) #18	PXYLP1 (ENSCDRG00005008608) #19	ZBTB38 (ENSCDRG00005008946) #20	RASA2 (ENSCDRG00005008964) #21	RNF7 (ENSCDRG00005009202) #22	GRK7 (ENSCDRG00005009268) #23	ATP1B3 (ENSCDRG00005009339) #24	TFDP2 (ENSCDRG00005009411) #26	GK5 (ENSCDRG00005009714) #27	XRN1 (ENSCDRG00005009918) #28	ATR (ENSCDRG00005010671) #29	PLS1 (ENSCDRG00005010969) #30	TRPC1 (ENSCDRG00005011182) #31	PCOLCE2 (ENSCDRG00005011354) #32	U2SURP (ENSCDRG00005012054) #34	CHST2 (ENSCDRG00005012377) #35	SLC9A9 (ENSCDRG00005012431) #37	DIPK2A (ENSCDRG00005012670)	ENSCDRG00005012746	ENSCDRG00005012769
Laurasiatheria_b	ANCESTRAL SPECIES	2	ENSGT00940000157522	ENSGT00940000162075	ENSGT00390000007772	ENSGT00390000006095	ENSGT00900000141083.d	ENSGT00940000160165	ENSGT00940000159675 #13	ENSGT00950000183179.b.b #14	ENSGT00950000183086.a.a.b #15	ENSGT00530000064220 #16	ENSGT00940000154369.d #17	ENSGT01030000234629.C #18	ENSGT00390000016324 #19	ENSGT00940000161449 #20	ENSGT00940000158201 #21	ENSGT00940000155481 #22	ENSGT00940000160511 #23	ENSGT01030000234579.A.b #24	ENSGT00940000157909 #26	ENSGT01000000214434.A #27	ENSGT00670000098080 #28	ENSGT00940000155714 #29	ENSGT00950000183097.a.b #30	ENSGT01060000248594.f #31	ENSGT00940000157649 #32	ENSGT00940000162334 #33	ENSGT00390000010687.a.a #34	ENSGT00940000161292 #35	ENSGT00940000160094 #37	ENSGT00520000055625.b	ENSGT01030000234558.A.a.b
Carnivora	ANCESTRAL SPECIES	10	ENSGT00940000157522	ENSGT00940000162075	ENSGT00390000007772	ENSGT00390000006095	ENSGT00900000141083.d	ENSGT00940000160165	ENSGT00940000159675 #13	ENSGT00950000183179.b.b #14	ENSGT00950000183086.a.a.b #15	ENSGT00530000064220 #16	ENSGT00940000154369.d #17	ENSGT01030000234629.C #18	ENSGT00390000016324 #19	ENSGT00940000161449 #20	ENSGT00940000158201 #21	ENSGT00940000155481 #22	ENSGT00940000160511 #23	ENSGT01030000234579.A.b #24	ENSGT00940000157909 #26	ENSGT01000000214434.A #27	ENSGT00670000098080 #28	ENSGT00940000155714 #29	ENSGT00950000183097.a.b #30	ENSGT01060000248594.f #31	ENSGT00940000157649 #32	ENSGT00940000162334 #33	ENSGT00390000010687.a.a #34	ENSGT00940000161292 #35	ENSGT00940000160094 #37	ENSGT00520000055625.b	ENSGT01030000234558.A.a.b
Felidae	ANCESTRAL SPECIES	9	ENSGT00940000157522	ENSGT00940000162075	ENSGT00390000007772	ENSGT00390000006095	ENSGT00900000141083.d	ENSGT00940000160165	ENSGT00940000159675 #13	ENSGT00950000183179.b.b #14	ENSGT00950000183086.a.a.b #15	ENSGT00530000064220 #16	ENSGT00940000154369.d #17	ENSGT01030000234629.C #18	ENSGT00390000016324 #19	ENSGT00940000161449 #20	ENSGT00940000158201 #21	ENSGT00940000155481 #22	ENSGT00940000160511 #23	ENSGT01030000234579.A.b #24	ENSGT00940000157909 #26	ENSGT01000000214434.A #27	ENSGT00670000098080 #28	ENSGT00940000155714 #29	ENSGT00950000183097.a.b #30	ENSGT01060000248594.f #31	ENSGT00940000157649 #32	ENSGT00940000162334 #33	ENSGT00390000010687.a.a #34	ENSGT00940000161292 #35	ENSGT00940000160094 #37	ENSGT00520000055625.b	ENSGT01030000234558.A.a.b
Panthera	ANCESTRAL SPECIES	12	ENSGT00940000162075	ENSGT00390000007772	ENSGT00390000006095	ENSGT00900000141083.d	ENSGT00940000160165	ENSGT00940000159675 #13	ENSGT00950000183179.b.b #14	ENSGT00950000183086.a.a.b #15	ENSGT00530000064220 #16	ENSGT01020000230346.C.g.a	ENSGT00940000154369.d #17	ENSGT01030000234629.C #18	ENSGT00390000016324 #19	ENSGT00940000161449 #20	ENSGT00940000158201 #21	ENSGT00940000155481 #22	ENSGT00940000160511 #23	ENSGT01030000234579.A.b #24	ENSGT00940000157909 #26	ENSGT01000000214434.A #27	ENSGT00670000098080 #28	ENSGT00940000155714 #29	ENSGT00950000183097.a.b #30	ENSGT01060000248594.f #31	ENSGT00940000157649 #32	ENSGT00940000162334 #33	ENSGT00390000010687.a.a #34	ENSGT00940000161292 #35	ENSGT00940000160094 #37	ENSGT00520000055625.b	ENSGT01030000234558.A.a.b
Panthera_a	ANCESTRAL SPECIES	17	ENSGT00390000007772.ab	ENSGT00390000007772.`b.b	ENSGT00390000006095	ENSGT00900000141083.d	ENSGT00940000160165	ENSGT00940000159675 #13	ENSGT00950000183179.b.b #14	ENSGT00950000183086.a.a.b #15	ENSGT00530000064220 #16	ENSGT01020000230346.C.g.a	ENSGT00940000154369.d #17	ENSGT01030000234629.C #18	ENSGT00390000016324 #19	ENSGT00940000161449 #20	ENSGT00940000158201 #21	ENSGT00940000155481 #22	ENSGT00940000160511 #23	ENSGT01030000234579.A.b #24	ENSGT00940000157909 #26	ENSGT00940000156502.e.b	ENSGT01000000214434.A #27	ENSGT00670000098080 #28	ENSGT00940000155714 #29	ENSGT00950000183097.a.b #30	ENSGT01060000248594.f #31	ENSGT00940000157649 #32	ENSGT00940000162334 #33	ENSGT00390000010687.a.a #34	ENSGT00940000161292 #35	ENSGT00940000160094 #37	ENSGT00520000055625.b
lion	MODERN SPECIES	9	ENSPLOG00000013639	ENSPLOG00000013653	ENSPLOG00000013664	MRPS22 (ENSPLOG00000013676)	COPB2 (ENSPLOG00000013716)	RBP2 (ENSPLOG00000013963)	RBP1 (ENSPLOG00000014001) #13	NMNAT3 (ENSPLOG00000014115) #14	CLSTN2 (ENSPLOG00000014213) #15	TRIM42 (ENSPLOG00000014367) #16	SLC25A36 (ENSPLOG00000014443) #17	SPSB4 (ENSPLOG00000014502) #18	PXYLP1 (ENSPLOG00000014550) #19	ZBTB38 (ENSPLOG00000014693) #20	RASA2 (ENSPLOG00000014718) #21	RNF7 (ENSPLOG00000014770) #22	GRK7 (ENSPLOG00000014829) #23	ATP1B3 (ENSPLOG00000014889) #24	TFDP2 (ENSPLOG00000014941) #26	ENSPLOG00000015088	ENSPLOG00000015121	GK5 (ENSPLOG00000015158) #27	XRN1 (ENSPLOG00000015299) #28	ATR (ENSPLOG00000015412) #29	PLS1 (ENSPLOG00000015495) #30	TRPC1 (ENSPLOG00000015566) #31	PCOLCE2 (ENSPLOG00000015762) #32	PAQR9 (ENSPLOG00000015819) #33	U2SURP (ENSPLOG00000015841) #34	CHST2 (ENSPLOG00000015901) #35	SLC9A9 (ENSPLOG00000015913) #37
leopard	MODERN SPECIES	5	ENSPPRG00000015532	ENSPPRG00000015526	MRPS22 (ENSPPRG00000023721)	COPB2 (ENSPPRG00000024757)	RBP2 (ENSPPRG00000024816)	RBP1 (ENSPPRG00000022489) #13	NMNAT3 (ENSPPRG00000020994) #14	CLSTN2 (ENSPPRG00000017546) #15	TRIM42 (ENSPPRG00000016034) #16	ENSPPRG00000015570	SLC25A36 (ENSPPRG00000015256) #17	SPSB4 (ENSPPRG00000014139) #18	PXYLP1 (ENSPPRG00000013368) #19	ZBTB38 (ENSPPRG00000015363) #20	RASA2 (ENSPPRG00000012757) #21	RNF7 (ENSPPRG00000010875) #22	GRK7 (ENSPPRG00000010184) #23	ATP1B3 (ENSPPRG00000009308) #24	TFDP2 (ENSPPRG00000008909) #26	ENSPPRG00000015257	GK5 (ENSPPRG00000007419) #27	XRN1 (ENSPPRG00000007125) #28	ATR (ENSPPRG00000003180) #29	PLS1 (ENSPPRG00000002354) #30	TRPC1 (ENSPPRG00000000533) #31	PCOLCE2 (ENSPPRG00000000105) #32	PAQR9 (ENSPPRG00000015091) #33	U2SURP (ENSPPRG00000022258) #34	SLC9A9 (ENSPPRG00000013496) #37	DIPK2A (ENSPPRG00000012546)	PLOD2 (ENSPPRG00000012277)
Tiger	MODERN SPECIES	242					RBP2 (ENSPTIG00000019472)	RBP1 (ENSPTIG00000018689) #13	ENSPTIG00000018457 #14	CLSTN2 (ENSPTIG00000017838) #15	TRIM42 (ENSPTIG00000017506) #16	ENSPTIG00000017087	SLC25A36 (ENSPTIG00000015621) #17	SPSB4 (ENSPTIG00000015447) #18	PXYLP1 (ENSPTIG00000013939) #19	ZBTB38 (ENSPTIG00000005500) #20	RASA2 (ENSPTIG00000010804) #21	RNF7 (ENSPTIG00000010047) #22	GRK7 (ENSPTIG00000009733) #23	ENSPTIG00000009651	ENSPTIG00000005462	TFDP2 (ENSPTIG00000006460) #26	GK5 (ENSPTIG00000005036) #27	XRN1 (ENSPTIG00000021081) #28	ATR (ENSPTIG00000018572) #29	PLS1 (ENSPTIG00000014589) #30	TRPC1 (ENSPTIG00000009946) #31	PCOLCE2 (ENSPTIG00000009436) #32	U2SURP (ENSPTIG00000001167) #34	CHST2 (ENSPTIG00000005139) #35	SLC9A9 (ENSPTIG00000020998) #37	ENSPTIG00000020674	PLOD2 (ENSPTIG00000018891)
Cat	MODERN SPECIES	240	FOXL2 (ENSFCAG00000045890)	ENSFCAG00000044931	ENSFCAG00000041019	MRPS22 (ENSFCAG00000001464)	COPB2 (ENSFCAG00000001465)	RBP2 (ENSFCAG00000001467)	RBP1 (ENSFCAG00000034212) #13	NMNAT3 (ENSFCAG00000046056) #14	CLSTN2 (ENSFCAG00000002429) #15	TRIM42 (ENSFCAG00000001651) #16	SLC25A36 (ENSFCAG00000035204) #17	SPSB4 (ENSFCAG00000025256) #18	PXYLP1 (ENSFCAG00000022336) #19	ZBTB38 (ENSFCAG00000030922) #20	RASA2 (ENSFCAG00000002561) #21	RNF7 (ENSFCAG00000037838) #22	GRK7 (ENSFCAG00000010128) #23	ATP1B3 (ENSFCAG00000030431) #24	ENSFCAG00000028193	ENSFCAG00000048032	TFDP2 (ENSFCAG00000003086) #26	GK5 (ENSFCAG00000003088) #27	XRN1 (ENSFCAG00000027589) #28	ATR (ENSFCAG00000018078) #29	PLS1 (ENSFCAG00000030454) #30	TRPC1 (ENSFCAG00000022271) #31	PCOLCE2 (ENSFCAG00000001007) #32	PAQR9 (ENSFCAG00000024035) #33	CHST2 (ENSFCAG00000022945) #35	U2SURP (ENSFCAG00000012186) #34	SLC9A9 (ENSFCAG00000009297) #37
Caniformia	ANCESTRAL SPECIES		ENSGT00390000007772	ENSGT00390000006095	ENSGT00900000141083.d	ENSGT00940000160165	ENSGT00940000159675 #13	ENSGT00950000183179.b.b #14	ENSGT00950000183086.a.a.b #15	ENSGT00530000064220 #16	ENSGT00940000154369.d #17	ENSGT00940000154369.c.a ##17	ENSGT00940000154369.c.b ##17	ENSGT01030000234629.C #18	ENSGT00390000016324 #19	ENSGT00940000161449 #20	ENSGT00940000158201 #21	ENSGT00940000155481 #22	ENSGT00940000160511 #23	ENSGT01030000234579.A.b #24	ENSGT00940000157909 #26	ENSGT01000000214434.A #27	ENSGT00670000098080 #28	ENSGT00940000155714 #29	ENSGT00950000183097.a.b #30	ENSGT01060000248594.f #31	ENSGT00940000157649 #32	ENSGT00940000162334 #33	ENSGT00390000010687.a.a #34	ENSGT00940000161292 #35	ENSGT00940000160094 #37	ENSGT00520000055625.b	ENSGT01030000234558.A.a.b
Caniformia_b	ANCESTRAL SPECIES		ENSGT00390000007772	ENSGT00390000006095	ENSGT00900000141083.d	ENSGT00940000160165	ENSGT00940000159675 #13	ENSGT00950000183179.b.b #14	ENSGT00950000183086.a.a.b #15	ENSGT00530000064220 #16	ENSGT00940000154369.d #17	ENSGT00940000154369.c.a ##17	ENSGT00940000154369.c.b ##17	ENSGT01030000234629.C #18	ENSGT00390000016324 #19	ENSGT00940000161449 #20	ENSGT00940000158201 #21	ENSGT00940000155481 #22	ENSGT00940000160511 #23	ENSGT01030000234579.A.b #24	ENSGT00940000157909 #26	ENSGT01000000214434.A #27	ENSGT00670000098080 #28	ENSGT00940000155714 #29	ENSGT00950000183097.a.b #30	ENSGT01060000248594.f #31	ENSGT00940000157649 #32	ENSGT00940000162334 #33	ENSGT00390000010687.a.a #34	ENSGT00940000161292 #35	ENSGT00940000160094 #37	ENSGT00520000055625.b	ENSGT01030000234558.A.a.b
Ursidae	ANCESTRAL SPECIES	1	ENSGT00390000007772	ENSGT00390000006095	ENSGT00900000141083.d	ENSGT00940000160165	ENSGT00940000159675 #13	ENSGT00950000183179.b.b #14	ENSGT00950000183086.a.a.b #15	ENSGT00530000064220 #16	ENSGT00940000154369.d #17	ENSGT00940000154369.c.a ##17	ENSGT00940000154369.c.b ##17	ENSGT01030000234629.C #18	ENSGT00390000016324 #19	ENSGT00940000161449 #20	ENSGT00940000158201 #21	ENSGT00940000155481 #22	ENSGT00940000160511 #23	ENSGT01030000234579.A.b #24	ENSGT00940000157909 #26	ENSGT01000000214434.A #27	ENSGT00670000098080 #28	ENSGT00940000155714 #29	ENSGT00950000183097.a.b #30	ENSGT01060000248594.f #31	ENSGT00940000157649 #32	ENSGT00940000162334 #33	ENSGT00390000010687.a.a #34	ENSGT00940000161292 #35	ENSGT00940000160094 #37	ENSGT00520000055625.b	ENSGT01030000234558.A.a.b
Ursus	ANCESTRAL SPECIES	14	ENSGT00940000162075	ENSGT00390000007772	ENSGT00390000006095	ENSGT00900000141083.d	ENSGT00940000160165	ENSGT00940000159675 #13	ENSGT00950000183179.b.b #14	ENSGT00950000183086.a.a.b #15	ENSGT00530000064220 #16	ENSGT00940000154369.c.a ##17	ENSGT00940000154369.c.b ##17	ENSGT01030000234629.C #18	ENSGT00390000016324 #19	ENSGT00940000161449 #20	ENSGT00940000158201 #21	ENSGT00940000155481 #22	ENSGT00940000160511 #23	ENSGT01030000234579.A.b #24	ENSGT00940000157909 #26	ENSGT01000000214434.A #27	ENSGT00670000098080 #28	ENSGT00940000155714 #29	ENSGT00950000183097.a.b #30	ENSGT01060000248594.f #31	ENSGT00940000157649 #32	ENSGT00940000162334 #33	ENSGT00390000010687.a.a #34	ENSGT00940000161292 #35	ENSGT00940000160094 #37	ENSGT00520000055625.b	ENSGT01030000234558.A.a.b
American black bear	MODERN SPECIES	814															RASA2 (ENSUAMG00000018892) #21	RNF7 (ENSUAMG00000018889) #22	GRK7 (ENSUAMG00000018888) #23	ATP1B3 (ENSUAMG00000018885) #24	TFDP2 (ENSUAMG00000018884) #26
Polar bear	MODERN SPECIES	112	FAIM (ENSUMAG00000014858)	PIK3CB (ENSUMAG00000014852)	ENSUMAG00000014826	ENSUMAG00000014822	MRPS22 (ENSUMAG00000014808)	COPB2 (ENSUMAG00000014799)	RBP2 (ENSUMAG00000014792)	NMNAT3 (ENSUMAG00000014788) #14	CLSTN2 (ENSUMAG00000014685) #15	TRIM42 (ENSUMAG00000014662) #16	ENSUMAG00000014634 ##17	ENSUMAG00000014622 ##17	PXYLP1 (ENSUMAG00000014596) #19	ZBTB38 (ENSUMAG00000014585) #20	RASA2 (ENSUMAG00000013878) #21	RNF7 (ENSUMAG00000013758) #22	GRK7 (ENSUMAG00000013754) #23	ATP1B3 (ENSUMAG00000013750) #24	TFDP2 (ENSUMAG00000013741) #26	GK5 (ENSUMAG00000013679) #27	XRN1 (ENSUMAG00000013625) #28	ATR (ENSUMAG00000013217) #29	PLS1 (ENSUMAG00000013168) #30	TRPC1 (ENSUMAG00000012988) #31	PCOLCE2 (ENSUMAG00000012927) #32	PAQR9 (ENSUMAG00000012908) #33	SLC9A9 (ENSUMAG00000012650) #37	DIPK2A (ENSUMAG00000012620)	ENSUMAG00000012607	PLOD2 (ENSUMAG00000012593)	ENSUMAG00000012591
Giant Panda	MODERN SPECIES	16	ENSAMEG00000025901	ENSAMEG00000027748	ENSAMEG00000028418	COPB2 (ENSAMEG00000005657)	RBP2 (ENSAMEG00000003834)	RBP1 (ENSAMEG00000024877) #13	ENSAMEG00000026229 #14	ENSAMEG00000024606	CLSTN2 (ENSAMEG00000015696) #15	TRIM42 (ENSAMEG00000016501) #16	SLC25A36 (ENSAMEG00000016498) #17	SPSB4 (ENSAMEG00000016489) #18	PXYLP1 (ENSAMEG00000016481) #19	ZBTB38 (ENSAMEG00000019668) #20	RASA2 (ENSAMEG00000016471) #21	RNF7 (ENSAMEG00000029757) #22	GRK7 (ENSAMEG00000012428) #23	ENSAMEG00000028514	ATP1B3 (ENSAMEG00000012443) #24	TFDP2 (ENSAMEG00000012466) #26	GK5 (ENSAMEG00000012501) #27	XRN1 (ENSAMEG00000012538) #28	ATR (ENSAMEG00000012578) #29	PLS1 (ENSAMEG00000012619) #30	TRPC1 (ENSAMEG00000012683) #31	PCOLCE2 (ENSAMEG00000012725) #32	PAQR9 (ENSAMEG00000012752) #33	U2SURP (ENSAMEG00000012757) #34	CHST2 (ENSAMEG00000024314) #35	SLC9A9 (ENSAMEG00000012796) #37	DIPK2A (ENSAMEG00000012804)
Mustelinae	ANCESTRAL SPECIES	59											ENSGT00940000154369.d #17	ENSGT01030000234629.C #18	ENSGT00390000016324 #19	ENSGT00940000161449 #20	ENSGT00940000158201 #21	ENSGT00940000155481 #22	ENSGT00940000160511 #23	ENSGT01030000234579.A.b #24	ENSGT00940000157909 #26	ENSGT01000000214434.A #27	ENSGT00670000098080 #28	ENSGT00940000155714 #29	ENSGT00950000183097.a.b #30	ENSGT01060000248594.f #31	ENSGT00940000157649 #32	ENSGT00940000162334 #33	ENSGT00390000010687.a.a #34	ENSGT00940000161292 #35	ENSGT00940000160094 #37	ENSGT00520000055625.b	ENSGT01030000234558.A.a.b
Ferret	MODERN SPECIES	207	ENSMPUG00000012270	KDM4D (ENSMPUG00000012267)	CWC15 (ENSMPUG00000012265)	AMOTL1 (ENSMPUG00000012261)	PIWIL4 (ENSMPUG00000012256)	FUT4 (ENSMPUG00000019345)	ENSMPUG00000012255	ANKRD49 (ENSMPUG00000012252)	MRE11 (ENSMPUG00000012250)	GPR83 (ENSMPUG00000012244)	IZUMO1R (ENSMPUG00000012242)	PANX1 (ENSMPUG00000012239)	HEPHL1 (ENSMPUG00000012234)	ZBTB38 (ENSMPUG00000019344) #20	RASA2 (ENSMPUG00000012228) #21	RNF7 (ENSMPUG00000012222) #22	ENSMPUG00000012217	GRK7 (ENSMPUG00000012168) #23	ATP1B3 (ENSMPUG00000012165) #24	TFDP2 (ENSMPUG00000012159) #26	GK5 (ENSMPUG00000012150) #27	XRN1 (ENSMPUG00000012040) #28	ATR (ENSMPUG00000012022) #29	PLS1 (ENSMPUG00000011881) #30	TRPC1 (ENSMPUG00000011873) #31	PCOLCE2 (ENSMPUG00000011868) #32	PAQR9 (ENSMPUG00000019343) #33	U2SURP (ENSMPUG00000011855) #34	CHST2 (ENSMPUG00000019342) #35	SLC9A9 (ENSMPUG00000011846) #37	DIPK2A (ENSMPUG00000011840)
American mink	MODERN SPECIES	201										SLC25A36 (ENSNVIG00000013950) #17	SPSB4 (ENSNVIG00000013938) #18	PXYLP1 (ENSNVIG00000013915) #19	ZBTB38 (ENSNVIG00000013906) #20	ENSNVIG00000013900	RASA2 (ENSNVIG00000013822) #21	RBX2 (ENSNVIG00000013786) #22	GRK7 (ENSNVIG00000013769) #23	ENSNVIG00000013754	ENSNVIG00000013749	TFDP2 (ENSNVIG00000013598) #26	GK5 (ENSNVIG00000013575) #27	XRN1 (ENSNVIG00000013389) #28	ATR (ENSNVIG00000013314) #29	PLS1 (ENSNVIG00000013238) #30	TRPC1 (ENSNVIG00000013187) #31	PCOLCE2 (ENSNVIG00000013129) #32	PAQR9 (ENSNVIG00000013125) #33	U2SURP (ENSNVIG00000013061) #34	CHST2 (ENSNVIG00000013045) #35	SLC9A9 (ENSNVIG00000013014) #37	ENSNVIG00000013003
Canidae	ANCESTRAL SPECIES	24	ENSGT00390000007772	ENSGT00390000006095	ENSGT00900000141083.d	ENSGT00940000160165	ENSGT00940000159675 #13	ENSGT00950000183179.b.b #14	ENSGT00950000183086.a.a.b #15	ENSGT00530000064220 #16	ENSGT00940000154369.d #17	ENSGT00940000154369.c.a ##17	ENSGT00940000154369.c.b ##17	ENSGT01030000234629.C #18	ENSGT00390000016324 #19	ENSGT00940000161449 #20	ENSGT00940000158201 #21	ENSGT00940000155481 #22	ENSGT00940000160511 #23	ENSGT01030000234579.A.b #24	ENSGT00940000157909 #26	ENSGT01000000214434.A #27	ENSGT00670000098080 #28	ENSGT00940000155714 #29	ENSGT00950000183097.a.b #30	ENSGT01060000248594.f #31	ENSGT00940000157649 #32	ENSGT00940000162334 #33	ENSGT00390000010687.a.a #34	ENSGT00940000161292 #35	ENSGT00940000160094 #37	ENSGT00520000055625.b	ENSGT01030000234558.A.a.b
Red fox	DUPLICATION
Red fox	MODERN SPECIES	154	PIK3CB (ENSVVUG00000026537)	ENSVVUG00000026525	MRPS22 (ENSVVUG00000026523)	COPB2 (ENSVVUG00000026520)	RBP2 (ENSVVUG00000026518)	NMNAT3 (ENSVVUG00000026514) #14	CLSTN2 (ENSVVUG00000026267) #15	TRIM42 (ENSVVUG00000026257) #16	ENSVVUG00000026251 ##17	ENSVVUG00000026249 ##17	SPSB4 (ENSVVUG00000026246) #18	ENSVVUG00000026242 #19	ZBTB38 (ENSVVUG00000026241) #20	ENSVVUG00000026240	RASA2 (ENSVVUG00000026237) #21	RNF7 (ENSVVUG00000026234) #22	GRK7 (ENSVVUG00000026233) #23	ATP1B3 (ENSVVUG00000026231) #24	TFDP2 (ENSVVUG00000026228) #26	GK5 (ENSVVUG00000026188) #27	XRN1 (ENSVVUG00000024461) #28	ATR (ENSVVUG00000024124) #29	PLS1 (ENSVVUG00000021572) #30	TRPC1 (ENSVVUG00000021513) #31	PCOLCE2 (ENSVVUG00000021509) #32	PAQR9 (ENSVVUG00000021505) #33	U2SURP (ENSVVUG00000021495) #34	CHST2 (ENSVVUG00000021493) #35
Red fox	MODERN SPECIES	50							ZNF326 (ENSVVUG00000030223)	LRRC8D (ENSVVUG00000030219)	LRRC8C (ENSVVUG00000030215)	LRRC8B (ENSVVUG00000030213)	GBP6 (ENSVVUG00000030211)	GBP5 (ENSVVUG00000030204)	ENSVVUG00000030200	GBP1 (ENSVVUG00000030199)	KYAT3 (ENSVVUG00000030196)	ENSVVUG00000030195 #22	GTF2B (ENSVVUG00000030194)	ENSVVUG00000030193	PKN2 (ENSVVUG00000030190)	LMO4 (ENSVVUG00000030166)	HS2ST1 (ENSVVUG00000030160)	SELENOF (ENSVVUG00000030159)	SH3GLB1 (ENSVVUG00000030155)	ENSVVUG00000030152	CLCA4 (ENSVVUG00000030149)	CLCA1 (ENSVVUG00000030143)	CLCA2 (ENSVVUG00000030122)	ODF2L (ENSVVUG00000030120)	ENSVVUG00000030118	ENSVVUG00000030110	ENSVVUG00000030103
Canis_lupus	ANCESTRAL SPECIES	27	ENSGT00390000006095	ENSGT00900000141083.d	ENSGT00940000160165	ENSGT00940000159675 #13	ENSGT00950000183179.b.b #14	ENSGT00950000183086.a.a.b #15	ENSGT00530000064220 #16	ENSGT00940000154369.d #17	ENSGT00940000154369.c.a ##17	ENSGT00940000154369.c.b ##17	ENSGT01030000234629.C #18	ENSGT00390000016324 #19	ENSGT00940000161449 #20	ENSGT00940000158201 #21	ENSGT00950000185721	ENSGT00940000155481 #22	ENSGT00940000160511 #23	ENSGT01030000234579.A.b #24	ENSGT00940000157909 #26	ENSGT01000000214434.A #27	ENSGT00670000098080 #28	ENSGT00940000155714 #29	ENSGT00980000200423	ENSGT00950000183097.a.b #30	ENSGT01060000248594.f #31	ENSGT00940000157649 #32	ENSGT00940000162334 #33	ENSGT00390000010687.a.a #34	ENSGT00940000161292 #35	ENSGT00940000160094 #37	ENSGT00520000055625.b
Dingo	DUPLICATION
Dingo	MODERN SPECIES	80	ENSCAFG00020008235	ENSCAFG00020008237	COPB2 (ENSCAFG00020008249)	RBP2 (ENSCAFG00020008262)	RBP1 (ENSCAFG00020008276) #13	NMNAT3 (ENSCAFG00020008280) #14	CLSTN2 (ENSCAFG00020008307) #15	TRIM42 (ENSCAFG00020008472) #16	ENSCAFG00020008476 ##17	ENSCAFG00020008487 ##17	SPSB4 (ENSCAFG00020008496) #18	PXYLP1 (ENSCAFG00020008503) #19	ZBTB38 (ENSCAFG00020008519) #20	RASA2 (ENSCAFG00020008540) #21	ENSCAFG00020008615	ENSCAFG00020008621 #22	GRK7 (ENSCAFG00020008625) #23	ATP1B3 (ENSCAFG00020008628) #24	TFDP2 (ENSCAFG00020008640) #26	GK5 (ENSCAFG00020008666) #27	XRN1 (ENSCAFG00020009120) #28	ATR (ENSCAFG00020009248) #29	ENSCAFG00020009852	PLS1 (ENSCAFG00020009887) #30	TRPC1 (ENSCAFG00020010411) #31	PCOLCE2 (ENSCAFG00020010443) #32	PAQR9 (ENSCAFG00020010463) #33	U2SURP (ENSCAFG00020010497) #34	CHST2 (ENSCAFG00020011451) #35	SLC9A9 (ENSCAFG00020011470) #37	DIPK2A (ENSCAFG00020011532)
Dingo	MODERN SPECIES	172	CDC7 (ENSCAFG00020013566)	ENSCAFG00020013595	ZNF644 (ENSCAFG00020013610)	BARHL2 (ENSCAFG00020013615)	ENSCAFG00020013616	ZNF326 (ENSCAFG00020013621)	ENSCAFG00020013628	LRRC8C (ENSCAFG00020013634)	LRRC8B (ENSCAFG00020013636)	GBP6 (ENSCAFG00020013647)	GBP1 (ENSCAFG00020013656)	ENSCAFG00020013662	ENSCAFG00020013667	KYAT3 (ENSCAFG00020013672)	GTF2B (ENSCAFG00020013683)	ENSCAFG00020013691 #22	ENSCAFG00020013692	ENSCAFG00020013695	ENSCAFG00020013716	LMO4 (ENSCAFG00020013723)	HS2ST1 (ENSCAFG00020013749)	SELENOF (ENSCAFG00020013750)	ENSCAFG00020013754	SH3GLB1 (ENSCAFG00020013756)	ENSCAFG00020013760	CLCA4 (ENSCAFG00020013813)	CLCA1 (ENSCAFG00020013898)	CLCA2 (ENSCAFG00020013957)	ODF2L (ENSCAFG00020013982)	ENSCAFG00020014075	ENSCAFG00020014085
Dog	DUPLICATION
Dog	MODERN SPECIES	15	ENSCAFG00845026940	ENSCAFG00845026965	MRPS22 (ENSCAFG00845027000)	COPB2 (ENSCAFG00845027083)	RBP2 (ENSCAFG00845027313)	ENSCAFG00845027390 #13	NMNAT3 (ENSCAFG00845027464) #14	CLSTN2 (ENSCAFG00845027590) #15	TRIM42 (ENSCAFG00845027689) #16	SLC25A36 (ENSCAFG00845027764) #17	SPSB4 (ENSCAFG00845027830) #18	PXYLP1 (ENSCAFG00845027868) #19	ZBTB38 (ENSCAFG00845028009) #20	RASA2 (ENSCAFG00845028112) #21	ENSCAFG00845028197	ENSCAFG00845028212 #22	GRK7 (ENSCAFG00845028236) #23	ATP1B3 (ENSCAFG00845028285) #24	TFDP2 (ENSCAFG00845028411) #26	GK5 (ENSCAFG00845028559) #27	XRN1 (ENSCAFG00845028618) #28	ATR (ENSCAFG00845028753) #29	ENSCAFG00845028887	PLS1 (ENSCAFG00845028912) #30	TRPC1 (ENSCAFG00845028972) #31	PCOLCE2 (ENSCAFG00845029069) #32	PAQR9 (ENSCAFG00845029107) #33	U2SURP (ENSCAFG00845029146) #34	CHST2 (ENSCAFG00845029239) #35	SLC9A9 (ENSCAFG00845029260) #37	DIPK2A (ENSCAFG00845019923)
Dog	MODERN SPECIES	34	TGFBR3 (ENSCAFG00845016141)	CDC7 (ENSCAFG00845016428)	ENSCAFG00845016624	ZNF644 (ENSCAFG00845016789)	BARHL2 (ENSCAFG00845017033)	ENSCAFG00845017080	ZNF326 (ENSCAFG00845017298)	LRRC8D (ENSCAFG00845017387)	ENSCAFG00845017447	LRRC8C (ENSCAFG00845017546)	LRRC8B (ENSCAFG00845017669)	ENSCAFG00845017796	GBP1 (ENSCAFG00845018127)	KYAT3 (ENSCAFG00845018455)	GTF2B (ENSCAFG00845018664)	ENSCAFG00845018785 #22	ENSCAFG00845018822	PKN2 (ENSCAFG00845018917)	LMO4 (ENSCAFG00845019328)	HS2ST1 (ENSCAFG00845019416)	SH3GLB1 (ENSCAFG00845019543)	ENSCAFG00845020134	CLCA4 (ENSCAFG00845020831)	CLCA1 (ENSCAFG00845020906)	CLCA2 (ENSCAFG00845021008)	ODF2L (ENSCAFG00845021153)	ENSCAFG00845021655	ENSCAFG00845021690	COL24A1 (ENSCAFG00845022035)	ENSCAFG00845024397	ENSCAFG00845024424
Laurasiatheria_c	ANCESTRAL SPECIES	2	ENSGT00940000157522	ENSGT00940000162075	ENSGT00390000007772	ENSGT00390000006095	ENSGT00900000141083.d	ENSGT00940000160165	ENSGT00940000159675 #13	ENSGT00950000183179.b.b #14	ENSGT00950000183086.a.a.b #15	ENSGT00530000064220 #16	ENSGT00940000154369.d #17	ENSGT01030000234629.C #18	ENSGT00390000016324 #19	ENSGT00940000161449 #20	ENSGT00940000158201 #21	ENSGT00940000155481 #22	ENSGT00940000160511 #23	ENSGT01030000234579.A.b #24	ENSGT00940000157909 #26	ENSGT01000000214434.A #27	ENSGT00670000098080 #28	ENSGT00940000155714 #29	ENSGT00950000183097.a.b #30	ENSGT01060000248594.f #31	ENSGT00940000157649 #32	ENSGT00940000162334 #33	ENSGT00390000010687.a.a #34	ENSGT00940000161292 #35	ENSGT00940000160094 #37	ENSGT00520000055625.b	ENSGT01030000234558.A.a.b
Chiroptera	ANCESTRAL SPECIES	19	ENSGT00940000157522	ENSGT00940000162075	ENSGT00390000007772	ENSGT00390000006095	ENSGT00900000141083.d	ENSGT00940000160165	ENSGT00940000159675 #13	ENSGT00950000183179.b.b #14	ENSGT00950000183086.a.a.b #15	ENSGT00530000064220 #16	ENSGT00940000154369.d #17	ENSGT01030000234629.C #18	ENSGT00390000016324 #19	ENSGT00940000161449 #20	ENSGT00940000158201 #21	ENSGT00940000155481 #22	ENSGT00940000160511 #23	ENSGT01030000234579.A.b #24	ENSGT00940000157909 #26
Megabat	MODERN SPECIES	1535															RASA2 (ENSPVAG00000008023) #21	RNF7 (ENSPVAG00000008024) #22
Microchiroptera	ANCESTRAL SPECIES	16	ENSGT00390000007364	ENSGT00940000157522	ENSGT00390000007772	ENSGT00390000006095	ENSGT00900000141083.d	ENSGT00940000160165	ENSGT00940000159675 #13	ENSGT00950000183179.b.b #14	ENSGT00950000183086.a.a.b #15	ENSGT00530000064220 #16	ENSGT00940000154369.d #17	ENSGT01030000234629.C #18	ENSGT00390000016324 #19	ENSGT00940000161449 #20	ENSGT00940000158201 #21	ENSGT00940000155481 #22	ENSGT00940000160511 #23	ENSGT01030000234579.A.b #24	ENSGT00940000157909 #26	ENSGT00390000013132.y.a	ENSGT00390000009671	ENSGT00390000005194	ENSGT00390000013951	ENSGT00940000154583	ENSGT00940000155615	ENSGT00440000033958	ENSGT00940000153655.B	ENSGT00940000157922	ENSGT00940000158393	ENSGT00640000091558	ENSGT00390000007159
Greater horseshoe bat	MODERN SPECIES	8	ENSRFEG00010012997	MRPS22 (ENSRFEG00010013009)	COPB2 (ENSRFEG00010013082)	RBP2 (ENSRFEG00010013165)	RBP1 (ENSRFEG00010013215) #13	NMNAT3 (ENSRFEG00010013358) #14	ENSRFEG00010013420	CLSTN2 (ENSRFEG00010013540) #15	TRIM42 (ENSRFEG00010013822) #16	SLC25A36 (ENSRFEG00010013926) #17	SPSB4 (ENSRFEG00010014088) #18	PXYLP1 (ENSRFEG00010014126) #19	ZBTB38 (ENSRFEG00010014220) #20	RASA2 (ENSRFEG00010014242) #21	ENSRFEG00010014323	RNF7 (ENSRFEG00010014386) #22	ATP1B3 (ENSRFEG00010014478) #24	ENSRFEG00010014549 #26	CHCHD4 (ENSRFEG00010015265)	TMEM43 (ENSRFEG00010015322)	XPC (ENSRFEG00010015501)	LSM3 (ENSRFEG00010015559)	SLC6A6 (ENSRFEG00010015647)	GRIP2 (ENSRFEG00010015722)	ENSRFEG00010016101	CCDC174 (ENSRFEG00010016163)	C3orf20 (ENSRFEG00010016242)	FGD5 (ENSRFEG00010016481)	NR2C2 (ENSRFEG00010017049)	ENSRFEG00010017258	MRPS25 (ENSRFEG00010017280)
Microbat	MODERN SPECIES	945	ENSMLUG00000011579	MRPS22 (ENSMLUG00000015608)	COPB2 (ENSMLUG00000015621)	RBP2 (ENSMLUG00000004818)	ENSMLUG00000004824 #13	NMNAT3 (ENSMLUG00000005705) #14	CLSTN2 (ENSMLUG00000005298) #15	TRIM42 (ENSMLUG00000008678) #16	ENSMLUG00000025970	SLC25A36 (ENSMLUG00000001464) #17	SPSB4 (ENSMLUG00000001564) #18	PXYLP1 (ENSMLUG00000012502) #19	ZBTB38 (ENSMLUG00000012512) #20	RASA2 (ENSMLUG00000007834) #21	TFDP2 (ENSMLUG00000014707) #26	ENSMLUG00000007878 #22	GRK7 (ENSMLUG00000030484) #23	ATP1B3 (ENSMLUG00000011339) #24	ENSMLUG00000010633	TMEM43 (ENSMLUG00000010638)	XPC (ENSMLUG00000010655)	LSM3 (ENSMLUG00000010677)	SLC6A6 (ENSMLUG00000003862)	GRIP2 (ENSMLUG00000003868)	CCDC174 (ENSMLUG00000010390)	C3orf20 (ENSMLUG00000010404)	FGD5 (ENSMLUG00000010008)	NR2C2 (ENSMLUG00000010062)	ENSMLUG00000017504	RBSN (ENSMLUG00000010088)	TRH (ENSMLUG00000007249)
Equus	ANCESTRAL SPECIES	5	ENSGT00940000162075	ENSGT00390000007772	ENSGT00390000006095	ENSGT00900000141083.d	ENSGT00940000160165	ENSGT00940000159675 #13	ENSGT00950000183179.b.b #14	ENSGT00940000168009	ENSGT00950000183086.a.a.b #15	ENSGT00530000064220 #16	ENSGT00940000154369.d #17	ENSGT01030000234629.C #18	ENSGT00390000016324 #19	ENSGT00940000161449 #20	ENSGT00940000158201 #21	ENSGT00940000155481 #22	ENSGT00940000160511 #23	ENSGT01030000234579.A.b #24	ENSGT00940000157909 #26	ENSGT01000000214434.A #27	ENSGT00670000098080 #28	ENSGT00940000155714 #29	ENSGT00950000183097.a.b #30	ENSGT01060000248594.f #31	ENSGT00940000157649 #32	ENSGT00940000162334 #33	ENSGT00390000010687.a.a #34	ENSGT00940000161292 #35	ENSGT00940000160094 #37	ENSGT00520000055625.b	ENSGT01030000234558.A.a.b
Horse	MODERN SPECIES	7	FOXL2 (ENSECAG00000034891)	ENSECAG00000047572	MRPS22 (ENSECAG00000013272)	COPB2 (ENSECAG00000015099)	ENSECAG00000034060	RBP2 (ENSECAG00000020170) #13	NMNAT3 (ENSECAG00000021932) #14	ENSECAG00000001591	CLSTN2 (ENSECAG00000022054) #15	TRIM42 (ENSECAG00000008921) #16	SLC25A36 (ENSECAG00000010094) #17	SPSB4 (ENSECAG00000010241) #18	PXYLP1 (ENSECAG00000010807) #19	ZBTB38 (ENSECAG00000010836) #20	RASA2 (ENSECAG00000010845) #21	RNF7 (ENSECAG00000026883) #22	GRK7 (ENSECAG00000018719) #23	ATP1B3 (ENSECAG00000019885) #24	TFDP2 (ENSECAG00000021725) #26	GK5 (ENSECAG00000045044) #27	ENSECAG00000055509	XRN1 (ENSECAG00000056093) #28	ATR (ENSECAG00000013285) #29	PLS1 (ENSECAG00000014408) #30	TRPC1 (ENSECAG00000018048) #31	PCOLCE2 (ENSECAG00000020485) #32	PAQR9 (ENSECAG00000021863) #33	U2SURP (ENSECAG00000022460) #34	CHST2 (ENSECAG00000000982) #35	SLC9A9 (ENSECAG00000006450) #37	DIPK2A (ENSECAG00000009060)
Donkey	MODERN SPECIES	13	FOXL2 (ENSEASG00005035226)	ENSEASG00005035070	ENSEASG00005034865	MRPS22 (ENSEASG00005003738)	COPB2 (ENSEASG00005003731)	RBP2 (ENSEASG00005037574)	NMNAT3 (ENSEASG00005023895) #14	ENSEASG00005003712	CLSTN2 (ENSEASG00005003683) #15	TRIM42 (ENSEASG00005003676) #16	SLC25A36 (ENSEASG00005003673) #17	SPSB4 (ENSEASG00005003671) #18	PXYLP1 (ENSEASG00005024376) #19	ZBTB38 (ENSEASG00005038051) #20	RASA2 (ENSEASG00005003659) #21	ENSEASG00005027864 #22	GRK7 (ENSEASG00005003655) #23	ATP1B3 (ENSEASG00005003651) #24	ENSEASG00005003649	TFDP2 (ENSEASG00005003645) #26	GK5 (ENSEASG00005003607) #27	XRN1 (ENSEASG00005002687) #28	ATR (ENSEASG00005002097) #29	PLS1 (ENSEASG00005000633) #30	TRPC1 (ENSEASG00005000262) #31	PCOLCE2 (ENSEASG00005000245) #32	PAQR9 (ENSEASG00005000232) #33	U2SURP (ENSEASG00005000213) #34	CHST2 (ENSEASG00005024234) #35	SLC9A9 (ENSEASG00005000191) #37	DIPK2A (ENSEASG00005000184)
Atlantogenata	ANCESTRAL SPECIES	45						ENSGT00940000160165	ENSGT00940000159675 #13	ENSGT00950000183179.b.b #14	ENSGT00950000183086.a.a.b #15	ENSGT00530000064220 #16	ENSGT00940000154369 #17	ENSGT01030000234629.C #18	ENSGT00390000016324 #19	ENSGT00940000161449 #20	ENSGT00940000158201 #21	ENSGT00940000155481 #22	ENSGT00940000160511 #23	ENSGT01030000234579.A.b #24	ENSGT00940000157909 #26	ENSGT01000000214434.A #27	ENSGT00670000098080 #28	ENSGT00940000155714 #29	ENSGT00950000183097.a.b #30	ENSGT01060000248594.f #31	ENSGT00940000157649 #32	ENSGT00940000162334 #33	ENSGT00390000010687.a.a #34	ENSGT00940000161292 #35	ENSGT00940000160094 #37	ENSGT00520000055625.b	ENSGT01030000234558.A.a.b
Xenarthra	ANCESTRAL SPECIES	454														ENSGT00940000161449 #20	ENSGT00940000158201 #21	ENSGT00940000155481 #22	ENSGT01030000234579.A.b #24	ENSGT00940000157909 #26	ENSGT01000000214434.A #27	ENSGT00670000098080 #28	ENSGT00940000155714 #29	ENSGT00950000183097.a.b #30	ENSGT01060000248594.f #31
Sloth	DUPLICATION
Sloth	MODERN SPECIES	10189																ENSCHOG00000010742 #22
Sloth	MODERN SPECIES	9500																ENSCHOG00000008597 #22
Armadillo	MODERN SPECIES	1632												PXYLP1 (ENSDNOG00000045727) #19	ENSDNOG00000032384	ZBTB38 (ENSDNOG00000037832) #20	RASA2 (ENSDNOG00000034505) #21	RNF7 (ENSDNOG00000036142) #22	ENSDNOG00000014445 #24	TFDP2 (ENSDNOG00000016968) #26	GK5 (ENSDNOG00000008740) #27	ENSDNOG00000032191 #28	ENSDNOG00000038825 #28	ENSDNOG00000034202 #28	ATR (ENSDNOG00000004703) #29	ENSDNOG00000004134	PLS1 (ENSDNOG00000033919) #30	TRPC1 (ENSDNOG00000006488) #31
Afrotheria	ANCESTRAL SPECIES	59								ENSGT00940000159675 #13	ENSGT00950000183179.b.b #14	ENSGT00950000183086.a.a.b #15	ENSGT00530000064220 #16	ENSGT00940000154369 #17	ENSGT01030000234629.C #18	ENSGT00390000016324 #19	ENSGT00940000158201 #21	ENSGT00940000155481 #22	ENSGT00940000160511 #23	ENSGT01030000234579.A.b #24	ENSGT00940000157909 #26	ENSGT01000000214434.A #27	ENSGT00670000098080 #28	ENSGT00940000155714 #29	ENSGT00950000183097.a.b #30	ENSGT01060000248594.f #31	ENSGT00940000157649 #32	ENSGT00390000010687.a.a #34	ENSGT00940000161292 #35	ENSGT00940000160094 #37	ENSGT00520000055625.b	ENSGT01030000234558.A.a.b	ENSGT00940000161947
Afrotheria_a	ANCESTRAL SPECIES	57								ENSGT00940000159675 #13	ENSGT00950000183179.b.b #14	ENSGT00950000183086.a.a.b #15	ENSGT00530000064220 #16	ENSGT00940000154369 #17	ENSGT01030000234629.C #18	ENSGT00390000016324 #19	ENSGT00940000158201 #21	ENSGT00940000155481 #22	ENSGT00940000160511 #23	ENSGT01030000234579.A.b #24	ENSGT00940000157909 #26	ENSGT01000000214434.A #27	ENSGT00670000098080 #28	ENSGT00940000155714 #29	ENSGT00950000183097.a.b #30	ENSGT01060000248594.f #31	ENSGT00940000157649 #32	ENSGT00390000010687.a.a #34	ENSGT00940000161292 #35	ENSGT00940000160094 #37	ENSGT00520000055625.b	ENSGT01030000234558.A.a.b	ENSGT00940000161947
Elephant	MODERN SPECIES	383								RBP1 (ENSLAFG00000022319) #13	NMNAT3 (ENSLAFG00000009824) #14	CLSTN2 (ENSLAFG00000017595) #15	TRIM42 (ENSLAFG00000008928) #16	SLC25A36 (ENSLAFG00000001428) #17	SPSB4 (ENSLAFG00000004961) #18	PXYLP1 (ENSLAFG00000010318) #19	RASA2 (ENSLAFG00000004893) #21	RNF7 (ENSLAFG00000005263) #22	GRK7 (ENSLAFG00000005265) #23	ATP1B3 (ENSLAFG00000010553) #24	TFDP2 (ENSLAFG00000010557) #26	GK5 (ENSLAFG00000008661) #27	XRN1 (ENSLAFG00000015426) #28	ATR (ENSLAFG00000015442) #29	PLS1 (ENSLAFG00000008746) #30	TRPC1 (ENSLAFG00000004282) #31	PCOLCE2 (ENSLAFG00000004287) #32	U2SURP (ENSLAFG00000002566) #34	CHST2 (ENSLAFG00000001355) #35	SLC9A9 (ENSLAFG00000000863) #37	DIPK2A (ENSLAFG00000004615)	ENSLAFG00000003009	PLOD2 (ENSLAFG00000001931)
Tenrec	MODERN SPECIES	1559																RNF7 (ENSETEG00000001411) #22
Marsupialia	ANCESTRAL SPECIES	8	ENSGT00390000009776.m	ENSGT01030000234590.A.a.b	ENSGT00940000155511	ENSGT00950000183022.a.a.a	ENSGT01100000263779	ENSGT00940000162537	ENSGT00390000016193	ENSGT00940000153313.A	ENSGT00510000048154	ENSGT00940000158872	ENSGT00940000156517	ENSGT00390000001015	ENSGT00940000160895	ENSGT00940000161449 #20	ENSGT00940000158201 #21	ENSGT00940000155481 #22	ENSGT00940000160511 #23	ENSGT01030000234579.A.b #24	ENSGT00940000157909 #26	ENSGT01000000214434.A #27	ENSGT00670000098080 #28	ENSGT00940000155714 #29	ENSGT00950000183097.a.b #30	ENSGT01060000248594.f #31	ENSGT00940000157649 #32	ENSGT00940000162334 #33	ENSGT00390000010687.a.a #34	ENSGT00940000161292 #35	ENSGT00940000160094 #37	ENSGT00520000055625.b	ENSGT01030000234558.A.a.b
Opossum	MODERN SPECIES	6	ENSMODG00000027463	ENSMODG00000021218	ENSMODG00000027985	ENSMODG00000024715	ENSMODG00000028779	SPHKAP (ENSMODG00000021219)	ENSMODG00000021220	ENSMODG00000046238	PID1 (ENSMODG00000024719)	DNER (ENSMODG00000021223)	TRIP12 (ENSMODG00000021224)	FBXO36 (ENSMODG00000037128)	SLC16A14 (ENSMODG00000021226)	ZBTB38 (ENSMODG00000047244) #20	RASA2 (ENSMODG00000021230) #21	RNF7 (ENSMODG00000021232) #22	GRK7 (ENSMODG00000021233) #23	ENSMODG00000045173 #24	TFDP2 (ENSMODG00000021234) #26	GK5 (ENSMODG00000021235) #27	XRN1 (ENSMODG00000021236) #28	ENSMODG00000045701 #29	PLS1 (ENSMODG00000021238) #30	TRPC1 (ENSMODG00000021239) #31	PCOLCE2 (ENSMODG00000021240) #32	PAQR9 (ENSMODG00000021241) #33	ENSMODG00000021242 #34	CHST2 (ENSMODG00000021243) #35	SLC9A9 (ENSMODG00000021244) #37	DIPK2A (ENSMODG00000021245)	ENSMODG00000029727
Marsupialia_b	ANCESTRAL SPECIES	7	ENSGT00390000009776.m	ENSGT01030000234590.A.a.b	ENSGT00940000155511	ENSGT00950000183022.a.a.a	ENSGT01100000263779	ENSGT00940000162537	ENSGT00390000016193	ENSGT00940000153313.A	ENSGT00510000048154	ENSGT00940000158872	ENSGT00940000156517	ENSGT00390000001015	ENSGT00940000160895	ENSGT00940000161449 #20	ENSGT00940000158201 #21	ENSGT00940000155481 #22	ENSGT00940000160511 #23	ENSGT01030000234579.A.b #24	ENSGT00940000157909 #26	ENSGT01000000214434.A #27	ENSGT00670000098080 #28	ENSGT00940000155714 #29	ENSGT00950000183097.a.b #30	ENSGT01060000248594.f #31	ENSGT00940000157649 #32	ENSGT00940000162334 #33	ENSGT00390000010687.a.a #34	ENSGT00940000161292 #35	ENSGT00940000160094 #37	ENSGT00520000055625.b	ENSGT01030000234558.A.a.b
Diprotodontia	ANCESTRAL SPECIES	17	ENSGT00390000009776.m	ENSGT01030000234590.A.a.b	ENSGT00940000155511	ENSGT00950000183022.a.a.a	ENSGT01100000263779	ENSGT00940000162537	ENSGT00390000016193	ENSGT00940000153313.A	ENSGT00510000048154	ENSGT00940000158872	ENSGT00940000156517	ENSGT00390000001015	ENSGT00940000160895	ENSGT00940000161449 #20	ENSGT00940000158201 #21	ENSGT00940000155481 #22	ENSGT00940000160511 #23	ENSGT01030000234579.A.b #24	ENSGT00940000157909 #26	ENSGT01000000214434.A #27	ENSGT00670000098080 #28	ENSGT00940000155714 #29	ENSGT00950000183097.a.b #30	ENSGT01060000248594.f #31	ENSGT00940000157649 #32	ENSGT00940000162334 #33	ENSGT00390000010687.a.a #34	ENSGT00940000161292 #35	ENSGT00940000160094 #37	ENSGT00520000055625.b	ENSGT01030000234558.A.a.b
Diprotodontia_a	ANCESTRAL SPECIES	19	ENSGT00390000009776.m	ENSGT01030000234590.A.a.b	ENSGT00940000155511	ENSGT00950000183022.a.a.a	ENSGT01100000263779	ENSGT00940000162537	ENSGT00390000016193	ENSGT00940000153313.A	ENSGT00510000048154	ENSGT00940000158872	ENSGT00940000156517	ENSGT00390000001015	ENSGT00940000160895	ENSGT00940000161449 #20	ENSGT00940000158201 #21	ENSGT00940000155481 #22	ENSGT00940000160511 #23	ENSGT01030000234579.A.b #24	ENSGT00940000157909 #26	ENSGT01000000214434.A #27	ENSGT00670000098080 #28	ENSGT00940000155714 #29	ENSGT00950000183097.a.b #30	ENSGT01060000248594.f #31	ENSGT00940000157649 #32	ENSGT00940000162334 #33	ENSGT00390000010687.a.a #34	ENSGT00940000161292 #35	ENSGT00940000160094 #37	ENSGT00520000055625.b	ENSGT01030000234558.A.a.b
Common wonbat	MODERN SPECIES	1046	MFF (ENSVURG00010007371)	TM4SF20 (ENSVURG00010007397)	AGFG1 (ENSVURG00010007409)	SLC19A3 (ENSVURG00010007431)	ENSVURG00010007454	DAW1 (ENSVURG00010007460)	ENSVURG00010007474	SPHKAP (ENSVURG00010007487)	PID1 (ENSVURG00010007505)	DNER (ENSVURG00010007553)	TRIP12 (ENSVURG00010008160)	FBXO36 (ENSVURG00010008178)	SLC16A14 (ENSVURG00010008191)	ZBTB38 (ENSVURG00010008197) #20	RASA2 (ENSVURG00010008213) #21	RNF7 (ENSVURG00010008229) #22	GRK7 (ENSVURG00010008270) #23	ATP1B3 (ENSVURG00010009116) #24	TFDP2 (ENSVURG00010009145) #26	GK5 (ENSVURG00010009628) #27	XRN1 (ENSVURG00010009981) #28	ATR (ENSVURG00010010065) #29	PLS1 (ENSVURG00010010250) #30	TRPC1 (ENSVURG00010010280) #31	PCOLCE2 (ENSVURG00010010407) #32	PAQR9 (ENSVURG00010010423) #33	U2SURP (ENSVURG00010010436) #34	CHST2 (ENSVURG00010010449) #35	SLC9A9 (ENSVURG00010010469) #37	ENSVURG00010010488	DIPK2A (ENSVURG00010010492)
koala	MODERN SPECIES	210	ENSPCIG00000030744	TM4SF20 (ENSPCIG00000020723)	AGFG1 (ENSPCIG00000020158)	SLC19A3 (ENSPCIG00000020161)	ENSPCIG00000020162	DAW1 (ENSPCIG00000020163)	ENSPCIG00000020164	SPHKAP (ENSPCIG00000020165)	PID1 (ENSPCIG00000014519)	DNER (ENSPCIG00000029709)	TRIP12 (ENSPCIG00000029188)	FBXO36 (ENSPCIG00000032520)	SLC16A14 (ENSPCIG00000029187)	ENSPCIG00000036700 #20	RASA2 (ENSPCIG00000029184) #21	ENSPCIG00000033866 #22	GRK7 (ENSPCIG00000029179) #23	ATP1B3 (ENSPCIG00000029176) #24	TFDP2 (ENSPCIG00000029174) #26	GK5 (ENSPCIG00000029172) #27	ENSPCIG00000028735 #28	ENSPCIG00000028714 #29	PLS1 (ENSPCIG00000001474) #30	TRPC1 (ENSPCIG00000028304) #31	PCOLCE2 (ENSPCIG00000028236) #32	PAQR9 (ENSPCIG00000007113) #33	U2SURP (ENSPCIG00000004246) #34	CHST2 (ENSPCIG00000004149) #35	ENSPCIG00000031034 #37
Wallaby	MODERN SPECIES	2306																RNF7 (ENSMEUG00000014789) #22
Tasmanian devil	MODERN SPECIES	2	ENSSHAG00000021545	AGFG1 (ENSSHAG00000011141)	SLC19A3 (ENSSHAG00000010323)	ENSSHAG00000009236	DAW1 (ENSSHAG00000008565)	ENSSHAG00000021439	SPHKAP (ENSSHAG00000007979)	ENSSHAG00000027803	PID1 (ENSSHAG00000025086)	DNER (ENSSHAG00000018355)	TRIP12 (ENSSHAG00000018173)	FBXO36 (ENSSHAG00000031805)	ENSSHAG00000017940	ENSSHAG00000025608 #20	RASA2 (ENSSHAG00000031423) #21	RNF7 (ENSSHAG00000017359) #22	ATP1B3 (ENSSHAG00000031427) #24	TFDP2 (ENSSHAG00000016738) #26	GK5 (ENSSHAG00000016479) #27	ATR (ENSSHAG00000015877) #29	XRN1 (ENSSHAG00000016207) #28	PLS1 (ENSSHAG00000015476) #30	TRPC1 (ENSSHAG00000015224) #31	PCOLCE2 (ENSSHAG00000014924) #32	PAQR9 (ENSSHAG00000028493) #33	U2SURP (ENSSHAG00000014407) #34	CHST2 (ENSSHAG00000026065) #35	ENSSHAG00000027403	SLC9A9 (ENSSHAG00000009445) #37	DIPK2A (ENSSHAG00000024587)	PLOD2 (ENSSHAG00000017470)
Platypus	MODERN SPECIES		PLSCR1 (ENSOANG00000012076)	PLOD2 (ENSOANG00000001812)	DIPK2A (ENSOANG00000038588)	SLC9A9 (ENSOANG00000011733) #37	CHST2 (ENSOANG00000038278) #35	U2SURP (ENSOANG00000003644) #34	PAQR9 (ENSOANG00000003643) #33	PCOLCE2 (ENSOANG00000050644) #32	TRPC1 (ENSOANG00000003645) #31	PLS1 (ENSOANG00000003646) #30	ATR (ENSOANG00000003647) #29	ENSOANG00000003648	ENSOANG00000042808	FBXO36 (ENSOANG00000049141)	RASA2 (ENSOANG00000002775) #21	RNF7 (ENSOANG00000046387) #22	ENSOANG00000004270 #23	ATP1B3 (ENSOANG00000038147) #24	TFDP2 (ENSOANG00000000434) #26	GK5 (ENSOANG00000008784) #27	XRN1 (ENSOANG00000006735) #28	ENSOANG00000012740	PID1 (ENSOANG00000038888)	SELENOT (ENSOANG00000013145)	ENSOANG00000051071	SIAH2 (ENSOANG00000037560)	CLRN1 (ENSOANG00000005982)	GPR171 (ENSOANG00000012171)	P2RY14 (ENSOANG00000012172)	GPR87 (ENSOANG00000005305)	P2RY13 (ENSOANG00000013417)
Sauria	ANCESTRAL SPECIES	9	ENSGT00940000155511	ENSGT00950000185427	ENSGT00950000183022.a.a.a	ENSGT01100000263557.B	ENSGT00940000162537	ENSGT00940000153313.A	ENSGT00510000048154	ENSGT00940000171821	ENSGT00940000158872	ENSGT00940000156517	ENSGT00390000001015	ENSGT00940000160895	ENSGT00990000205179	ENSGT00940000161449 #20	ENSGT00940000158201 #21	ENSGT00940000155481 #22	ENSGT00940000160511 #23	ENSGT01030000234579.A.b #24	ENSGT00910000147942	ENSGT00940000157909 #26	ENSGT01000000214434.A #27	ENSGT00670000098080 #28	ENSGT00940000155714 #29	ENSGT00950000183097.a.b #30	ENSGT01060000248594.f #31	ENSGT00940000157649 #32	ENSGT00940000162334 #33	ENSGT00390000010687.a.a #34	ENSGT00940000161292 #35	ENSGT00940000160094 #37	ENSGT00520000055625.b
Lepidosauria	ANCESTRAL SPECIES	12	ENSGT00390000016956	ENSGT00940000155511	ENSGT00950000183022.a.a.a	ENSGT01100000263557.B	ENSGT00940000162537	ENSGT00940000153313.A	ENSGT00510000048154	ENSGT00940000171821	ENSGT00940000158872	ENSGT00940000156517	ENSGT00390000001015	ENSGT00940000160895	ENSGT00990000205179	ENSGT00940000161449 #20	ENSGT00940000158201 #21	ENSGT00940000155481 #22	ENSGT00940000160511 #23	ENSGT01030000234579.A.b #24	ENSGT00910000147942	ENSGT00940000157909 #26	ENSGT01000000214434.A #27	ENSGT00670000098080 #28	ENSGT00940000155714 #29	ENSGT00950000183097.a.b #30	ENSGT01060000248594.f #31	ENSGT00940000157649 #32	ENSGT00940000162334 #33	ENSGT00390000010687.a.a #34	ENSGT00940000161292 #35	ENSGT00940000160094 #37	ENSGT00520000055625.b
Episquamata	ANCESTRAL SPECIES	2	ENSGT00390000009776	ENSGT00390000016956	ENSGT00940000155511	ENSGT00950000183022.a.a.a	ENSGT01100000263557.B	ENSGT00940000162537	ENSGT00940000153313.A	ENSGT00510000048154	ENSGT00940000158872	ENSGT00940000156517	ENSGT00390000001015	ENSGT00940000160895	ENSGT00990000205179	ENSGT00940000161449 #20	ENSGT00940000158201 #21	ENSGT00940000155481 #22	ENSGT00940000160511 #23	ENSGT01030000234579.A.b #24	ENSGT00910000147942	ENSGT00940000157909 #26	ENSGT01000000214434.A #27	ENSGT00670000098080 #28	ENSGT00940000155714 #29	ENSGT00950000183097.a.b #30	ENSGT01060000248594.f #31	ENSGT00940000157649 #32	ENSGT00940000162334.c #33	ENSGT00390000010687.a.a #34	ENSGT00940000161292 #35	ENSGT00940000160094 #37	ENSGT00520000055625.b
Toxicofera	ANCESTRAL SPECIES	2	ENSGT00390000009776	ENSGT00390000016956	ENSGT00940000155511	ENSGT00950000183022.a.a.a	ENSGT01100000263557.B	ENSGT00940000162537	ENSGT00940000153313.A	ENSGT00510000048154	ENSGT00940000158872	ENSGT00940000156517	ENSGT00390000001015	ENSGT00940000160895	ENSGT00990000205179	ENSGT00940000161449 #20	ENSGT00940000158201 #21	ENSGT00940000155481 #22	ENSGT00940000160511 #23	ENSGT01030000234579.A.b #24	ENSGT00910000147942	ENSGT00940000157909 #26	ENSGT01000000214434.A #27	ENSGT00670000098080 #28	ENSGT00940000155714 #29	ENSGT00950000183097.a.b #30	ENSGT01060000248594.f #31	ENSGT00940000157649 #32	ENSGT00940000162334.c #33	ENSGT00390000010687.a.a #34	ENSGT00940000161292 #35	ENSGT00940000160094 #37	ENSGT00520000055625.b
Elapidae	ANCESTRAL SPECIES	4	ENSGT00940000161675	ENSGT00390000009776	ENSGT00390000016956	ENSGT00940000155511	ENSGT00950000183022.a.a.a	ENSGT00940000162537	ENSGT00940000153313.A	ENSGT00510000048154	ENSGT00940000158872	ENSGT00940000156517	ENSGT00390000001015	ENSGT00940000160895	ENSGT00990000205179	ENSGT00940000161449 #20	ENSGT00940000158201 #21	ENSGT00940000155481 #22	ENSGT00940000160511 #23	ENSGT01030000234579.A.b #24	ENSGT01000000214434.A #27	ENSGT00670000098080 #28	ENSGT00940000155714 #29	ENSGT00950000183097.a.b #30	ENSGT01060000248594.f #31	ENSGT00940000157649 #32	ENSGT00940000162334.c #33	ENSGT00390000010687.a.a #34	ENSGT00940000161292 #35	ENSGT00940000160094 #37	ENSGT00520000055625.b	ENSGT01030000234558.A.a.b	ENSGT00940000154435.y.b.c.a
Elapidae_a	ANCESTRAL SPECIES		ENSGT00940000163514.C	ENSGT00390000009776	ENSGT00390000016956	ENSGT00940000155511	ENSGT00950000183022.a.a.a	ENSGT00940000162537	ENSGT00940000153313.A	ENSGT00510000048154	ENSGT00940000158872	ENSGT00940000156517	ENSGT00390000001015	ENSGT00940000160895	ENSGT00990000205179	ENSGT00940000161449 #20	ENSGT00940000158201 #21	ENSGT00940000155481 #22	ENSGT00940000160511 #23	ENSGT01030000234579.A.b #24	ENSGT01000000214434.A #27	ENSGT00670000098080 #28	ENSGT00940000155714 #29	ENSGT00950000183097.a.b #30	ENSGT01060000248594.f #31	ENSGT00940000157649 #32	ENSGT00940000162334.c #33	ENSGT00390000010687.a.a #34	ENSGT00940000161292 #35	ENSGT00940000160094 #37	ENSGT00520000055625.b	ENSGT01030000234558.A.a.b	ENSGT00940000154435.y.b.c.a
Acanthophiinae	ANCESTRAL SPECIES	1	ENSGT00940000163514.C	ENSGT00390000009776	ENSGT00390000016956	ENSGT00940000155511	ENSGT00950000183022.a.a.a	ENSGT00940000162537	ENSGT00940000153313.A	ENSGT00510000048154	ENSGT00940000158872	ENSGT00940000156517	ENSGT00390000001015	ENSGT00940000160895	ENSGT00990000205179	ENSGT00940000161449 #20	ENSGT00940000158201 #21	ENSGT00940000155481 #22	ENSGT00940000160511 #23	ENSGT01030000234579.A.b #24	ENSGT01000000214434.A #27	ENSGT00670000098080 #28	ENSGT00940000155714 #29	ENSGT00950000183097.a.b #30	ENSGT01060000248594.f #31	ENSGT00940000157649 #32	ENSGT00940000162334.c #33	ENSGT00390000010687.a.a #34	ENSGT00940000161292 #35	ENSGT00940000160094 #37	ENSGT00520000055625.b	ENSGT01030000234558.A.a.b	ENSGT00940000154435.y.b.c.a
Eastern brown snake	MODERN SPECIES	16	MFF (ENSPTXG00000009714)	MRPL44 (ENSPTXG00000009715)	AGFG1 (ENSPTXG00000009716)	ENSPTXG00000009717	ENSPTXG00000009718	DAW1 (ENSPTXG00000009719)	SPHKAP (ENSPTXG00000009720)	PID1 (ENSPTXG00000009721)	DNER (ENSPTXG00000009722)	TRIP12 (ENSPTXG00000009735)	FBXO36 (ENSPTXG00000009745)	SLC16A14 (ENSPTXG00000009746)	ENSPTXG00000009748	ZBTB38 (ENSPTXG00000009749) #20	RASA2 (ENSPTXG00000009751) #21	RNF7 (ENSPTXG00000009753) #22	GRK7 (ENSPTXG00000009756) #23	ATP1B3 (ENSPTXG00000004130) #24	GK5 (ENSPTXG00000004131) #27	XRN1 (ENSPTXG00000004133) #28	ATR (ENSPTXG00000004144) #29	PLS1 (ENSPTXG00000004568) #30	TRPC1 (ENSPTXG00000004571) #31	PCOLCE2 (ENSPTXG00000004573) #32	PAQR9 (ENSPTXG00000004575) #33	U2SURP (ENSPTXG00000004578) #34	CHST2 (ENSPTXG00000004582) #35	SLC9A9 (ENSPTXG00000004584) #37	DIPK2A (ENSPTXG00000004588)	ENSPTXG00000004590	PLOD2 (ENSPTXG00000004593)
Mainland tiger snake	MODERN SPECIES		RHBDD1 (ENSNSUG00000014638)	MFF (ENSNSUG00000014641)	MRPL44 (ENSNSUG00000014642)	AGFG1 (ENSNSUG00000014643)	SLC19A3 (ENSNSUG00000014646)	ENSNSUG00000014650	SPHKAP (ENSNSUG00000014651)	PID1 (ENSNSUG00000014652)	DNER (ENSNSUG00000014653)	TRIP12 (ENSNSUG00000014671)	FBXO36 (ENSNSUG00000017918)	SLC16A14 (ENSNSUG00000017919)	ENSNSUG00000017920	ENSNSUG00000017921 #20	RASA2 (ENSNSUG00000017922) #21	RNF7 (ENSNSUG00000017923) #22	GRK7 (ENSNSUG00000017924) #23	ATP1B3 (ENSNSUG00000017925) #24	ENSNSUG00000017926	GK5 (ENSNSUG00000017927) #27	XRN1 (ENSNSUG00000017931) #28	ATR (ENSNSUG00000018159) #29	PLS1 (ENSNSUG00000018160) #30	TRPC1 (ENSNSUG00000018161) #31	PCOLCE2 (ENSNSUG00000018162) #32	PAQR9 (ENSNSUG00000018174) #33	U2SURP (ENSNSUG00000018175) #34	CHST2 (ENSNSUG00000018357) #35	SLC9A9 (ENSNSUG00000018359) #37	DIPK2A (ENSNSUG00000018360)	PLOD2 (ENSNSUG00000018362)
Indian cobra	MODERN SPECIES	3	ENSNNAG00000009034	MFF (ENSNNAG00000009082)	MRPL44 (ENSNNAG00000009127)	AGFG1 (ENSNNAG00000009185)	ENSNNAG00000009274	ENSNNAG00000009285	DAW1 (ENSNNAG00000009315)	SPHKAP (ENSNNAG00000009441)	PID1 (ENSNNAG00000010791)	DNER (ENSNNAG00000010806)	TRIP12 (ENSNNAG00000010876)	FBXO36 (ENSNNAG00000011155)	SLC16A14 (ENSNNAG00000011174)	ENSNNAG00000011203	RASA2 (ENSNNAG00000011267) #21	RNF7 (ENSNNAG00000011407) #22	GRK7 (ENSNNAG00000011426) #23	ATP1B3 (ENSNNAG00000011441) #24	GK5 (ENSNNAG00000011468) #27	ENSNNAG00000011555 #28	ENSNNAG00000011684 #28	PLS1 (ENSNNAG00000011698) #30	TRPC1 (ENSNNAG00000011760) #31	PCOLCE2 (ENSNNAG00000011940) #32	PAQR9 (ENSNNAG00000011988) #33	U2SURP (ENSNNAG00000012126) #34	CHST2 (ENSNNAG00000013297) #35	SLC9A9 (ENSNNAG00000013322) #37	DIPK2A (ENSNNAG00000013354)	PLOD2 (ENSNNAG00000013369)	ENSNNAG00000013450
Lizard	MODERN SPECIES	2	CCL20 (ENSACAG00000028811)	ENSACAG00000044365	DAW1 (ENSACAG00000014780)	SPHKAP (ENSACAG00000014852)	ENSACAG00000042275	PID1 (ENSACAG00000037706)	DNER (ENSACAG00000005699)	TRIP12 (ENSACAG00000005440)	FBXO36 (ENSACAG00000005417)	SLC16A14 (ENSACAG00000005398)	ENSACAG00000040147	ENSACAG00000045523	ZBTB38 (ENSACAG00000005397) #20	RASA2 (ENSACAG00000005140) #21	ENSACAG00000045069	RNF7 (ENSACAG00000042179) #22	GRK7 (ENSACAG00000005127) #23	ENSACAG00000043689	ATP1B3 (ENSACAG00000005114) #24	TFDP2 (ENSACAG00000005086) #26	ENSACAG00000044984	GK5 (ENSACAG00000005041) #27	XRN1 (ENSACAG00000004985) #28	ATR (ENSACAG00000004915) #29	PLS1 (ENSACAG00000004791) #30	TRPC1 (ENSACAG00000004701) #31	PCOLCE2 (ENSACAG00000004684) #32	U2SURP (ENSACAG00000009512) #34	CHST2 (ENSACAG00000009603) #35	SLC9A9 (ENSACAG00000009684) #37	DIPK2A (ENSACAG00000009738)
Laterata	ANCESTRAL SPECIES		ENSGT00390000009776	ENSGT00390000016956	ENSGT00940000155511	ENSGT00950000183022.a.a.a	ENSGT01100000263557.B	ENSGT00940000162537	ENSGT00940000153313.A	ENSGT00510000048154	ENSGT00940000158872	ENSGT00940000156517	ENSGT00390000001015	ENSGT00940000160895	ENSGT00990000205179	ENSGT00940000161449 #20	ENSGT00940000158201 #21	ENSGT00940000155481 #22	ENSGT00940000160511 #23	ENSGT01030000234579.A.b #24	ENSGT00940000157909 #26	ENSGT01000000214434.A #27	ENSGT00670000098080 #28	ENSGT00940000155714 #29	ENSGT00950000183097.a.b #30	ENSGT01060000248594.f #31	ENSGT00940000157649 #32	ENSGT00940000162334.c #33	ENSGT00390000010687.a.a #34	ENSGT00940000161292 #35	ENSGT00940000160094 #37	ENSGT00520000055625.b	ENSGT01030000234558.A.a.b
Common wall lizard	MODERN SPECIES	13	ENSPMRG00000016681	CCL20 (ENSPMRG00000016685)	DAW1 (ENSPMRG00000016693)	SPHKAP (ENSPMRG00000016720)	ENSPMRG00000016727	PID1 (ENSPMRG00000016728)	DNER (ENSPMRG00000016739)	TRIP12 (ENSPMRG00000016947)	FBXO36 (ENSPMRG00000008066)	SLC16A14 (ENSPMRG00000008079)	ENSPMRG00000008088	ENSPMRG00000008117	ENSPMRG00000008124	ZBTB38 (ENSPMRG00000008135) #20	RASA2 (ENSPMRG00000008165) #21	RNF7 (ENSPMRG00000008187) #22	GRK7 (ENSPMRG00000008216) #23	ATP1B3 (ENSPMRG00000008279) #24	TFDP2 (ENSPMRG00000008286) #26	GK5 (ENSPMRG00000008301) #27	XRN1 (ENSPMRG00000008330) #28	ENSPMRG00000008373 #29	PLS1 (ENSPMRG00000008379) #30	TRPC1 (ENSPMRG00000008398) #31	PCOLCE2 (ENSPMRG00000008409) #32	PAQR9 (ENSPMRG00000008415) #33	ENSPMRG00000008421	U2SURP (ENSPMRG00000008445) #34	CHST2 (ENSPMRG00000008667) #35	SLC9A9 (ENSPMRG00000008672) #37	DIPK2A (ENSPMRG00000008685)
Argentine black and white tegu	MODERN SPECIES	19	MFF (ENSSMRG00000008982)	MRPL44 (ENSSMRG00000008983)	AGFG1 (ENSSMRG00000008984)	SLC19A3 (ENSSMRG00000008986)	ENSSMRG00000008987	DAW1 (ENSSMRG00000008988)	SPHKAP (ENSSMRG00000009023)	PID1 (ENSSMRG00000009072)	DNER (ENSSMRG00000009107)	TRIP12 (ENSSMRG00000009135)	FBXO36 (ENSSMRG00000016379)	SLC16A14 (ENSSMRG00000016380)	ENSSMRG00000016381	ZBTB38 (ENSSMRG00000016382) #20	RASA2 (ENSSMRG00000016383) #21	RNF7 (ENSSMRG00000016386) #22	GRK7 (ENSSMRG00000016387) #23	ATP1B3 (ENSSMRG00000016399) #24	TFDP2 (ENSSMRG00000016400) #26	GK5 (ENSSMRG00000016403) #27	XRN1 (ENSSMRG00000016406) #28	ATR (ENSSMRG00000016408) #29	PLS1 (ENSSMRG00000016409) #30	TRPC1 (ENSSMRG00000016410) #31	ENSSMRG00000016414 #32	PAQR9 (ENSSMRG00000016416) #33	U2SURP (ENSSMRG00000016420) #34	CHST2 (ENSSMRG00000017568) #35	SLC9A9 (ENSSMRG00000017575) #37	ENSSMRG00000017620	DIPK2A (ENSSMRG00000017621)
tuatara	MODERN SPECIES	453									PID1 (ENSSPUG00000011279)	ENSSPUG00000011259	DNER (ENSSPUG00000011243)	TRIP12 (ENSSPUG00000011145)	FBXO36 (ENSSPUG00000011112)	SLC16A14 (ENSSPUG00000011100)	RASA2 (ENSSPUG00000011047) #21	RNF7 (ENSSPUG00000011035) #22	GRK7 (ENSSPUG00000010946) #23	ATP1B3 (ENSSPUG00000010897) #24	TFDP2 (ENSSPUG00000010882) #26	GK5 (ENSSPUG00000010863) #27	ENSSPUG00000010844 #28	ENSSPUG00000010831 #28	ENSSPUG00000010779 #28	ENSSPUG00000010754 #28	ENSSPUG00000010743 #29	ENSSPUG00000010729 #29	ENSSPUG00000010719 #29	ENSSPUG00000010707 #29	ENSSPUG00000010701	ENSSPUG00000010694 #29	ENSSPUG00000010685 #29
Archelosauria	ANCESTRAL SPECIES	11	ENSGT00940000155511	ENSGT00950000185427	ENSGT00950000183022.a.a.a	ENSGT01100000263557.B	ENSGT00940000162537	ENSGT00940000153313.A	ENSGT00510000048154	ENSGT00940000171821	ENSGT00940000158872	ENSGT00940000156517	ENSGT00390000001015	ENSGT00940000160895	ENSGT00990000205179	ENSGT00940000161449 #20	ENSGT00940000158201 #21	ENSGT00940000155481 #22	ENSGT00940000160511 #23	ENSGT01030000234579.A.b #24	ENSGT00940000157909 #26	ENSGT01000000214434.A #27	ENSGT00670000098080 #28	ENSGT00940000155714 #29	ENSGT00950000183097.a.b #30	ENSGT01060000248594.f #31	ENSGT00940000157649 #32	ENSGT00940000162334 #33	ENSGT00390000010687.a.a #34	ENSGT00940000161292 #35	ENSGT00940000160094 #37	ENSGT00520000055625.b	ENSGT01030000234558.A.a.b
Archosauria	ANCESTRAL SPECIES	10	ENSGT00390000016956	ENSGT00940000155511	ENSGT00950000185427	ENSGT00950000183022.a.a.a	ENSGT01100000263557.B	ENSGT00940000162537	ENSGT00940000153313.A	ENSGT00510000048154	ENSGT00940000158872	ENSGT00940000156517	ENSGT00390000001015	ENSGT00940000160895	ENSGT00990000205179	ENSGT00940000161449 #20	ENSGT00940000158201 #21	ENSGT00940000155481 #22	ENSGT00940000160511 #23	ENSGT01030000234579.A.b #24	ENSGT00940000157909 #26	ENSGT00950000185901	ENSGT01000000214434.A #27	ENSGT00670000098080 #28	ENSGT00940000155714 #29	ENSGT00950000183097.a.b #30	ENSGT01060000248594.f #31	ENSGT00940000157649 #32	ENSGT00940000162334 #33	ENSGT00390000010687.a.a #34	ENSGT00940000161292 #35	ENSGT00940000160094 #37	ENSGT00520000055625.b
Australian saltwater crocodile	MODERN SPECIES	30	MRPL44 (ENSCPRG00005004235)	AGFG1 (ENSCPRG00005004202)	ENSCPRG00005004163	ENSCPRG00005004145	CCL20 (ENSCPRG00005004140)	DAW1 (ENSCPRG00005004129)	SPHKAP (ENSCPRG00005004125)	PID1 (ENSCPRG00005004115)	DNER (ENSCPRG00005004101)	TRIP12 (ENSCPRG00005002144)	FBXO36 (ENSCPRG00005001864)	SLC16A14 (ENSCPRG00005001853)	ENSCPRG00005001850	ZBTB38 (ENSCPRG00005001840) #20	RASA2 (ENSCPRG00005001834) #21	RNF7 (ENSCPRG00005001821) #22	GRK7 (ENSCPRG00005001818) #23	ATP1B3 (ENSCPRG00005001815) #24	TFDP2 (ENSCPRG00005001811) #26	ENSCPRG00005001780	GK5 (ENSCPRG00005001775) #27	XRN1 (ENSCPRG00005001722) #28	ATR (ENSCPRG00005001241) #29	PLS1 (ENSCPRG00005000638) #30	TRPC1 (ENSCPRG00005000420) #31	PCOLCE2 (ENSCPRG00005000291) #32	PAQR9 (ENSCPRG00005000250) #33	U2SURP (ENSCPRG00005000199) #34	CHST2 (ENSCPRG00005000183) #35	ENSCPRG00005000176	SLC9A9 (ENSCPRG00005000144) #37
Aves	ANCESTRAL SPECIES	13	ENSGT00390000009776	ENSGT00390000016956	ENSGT00940000155511	ENSGT00950000185427	ENSGT00950000183022.a.a.a	ENSGT01100000263557.B	ENSGT00940000162537	ENSGT00940000153313.A	ENSGT00510000048154	ENSGT00940000158872	ENSGT00940000156517	ENSGT00390000001015	ENSGT00940000160895	ENSGT00940000161449 #20	ENSGT00940000158201 #21	ENSGT00940000155481 #22	ENSGT00940000160511 #23	ENSGT01030000234579.A.b #24	ENSGT00940000157909 #26	ENSGT00950000185901	ENSGT01000000214434.A #27	ENSGT00670000098080 #28	ENSGT00940000155714 #29	ENSGT00950000183097.a.b #30	ENSGT01060000248594.f #31	ENSGT00940000157649 #32	ENSGT00940000162334 #33	ENSGT00390000010687.a.a #34	ENSGT00940000161292 #35	ENSGT00940000160094 #37	ENSGT00520000055625.b
African ostrich	MODERN SPECIES	1075														ZBTB38 (ENSSCUG00000014505) #20	RASA2 (ENSSCUG00000014519) #21	RNF7 (ENSSCUG00000014549) #22	GRK7 (ENSSCUG00000014550) #23	ATP1B3 (ENSSCUG00000014552) #24	TFDP2 (ENSSCUG00000014555) #26	GK5 (ENSSCUG00000014571) #27	XRN1 (ENSSCUG00000014591) #28	ATR (ENSSCUG00000014616) #29	PLS1 (ENSSCUG00000014649) #30	TRPC1 (ENSSCUG00000014651) #31	PCOLCE2 (ENSSCUG00000014659) #32	U2SURP (ENSSCUG00000014671) #34	ENSSCUG00000014689	SLC9A9 (ENSSCUG00000014692) #37	DIPK2A (ENSSCUG00000014695)	PLOD2 (ENSSCUG00000014760)	PLSCR1 (ENSSCUG00000014909)
Neognathae	ANCESTRAL SPECIES	9	ENSGT00390000009776	ENSGT00390000016956	ENSGT00940000155511	ENSGT00950000183022.a.a.a.s.a	ENSGT00950000183022.a.a.a.s.b	ENSGT01100000263557.B	ENSGT00940000162537	ENSGT00940000153313.A	ENSGT00510000048154	ENSGT00940000158872	ENSGT00940000156517	ENSGT00390000001015	ENSGT00940000160895	ENSGT00940000161449 #20	ENSGT00940000158201 #21	ENSGT00940000155481 #22	ENSGT00940000160511 #23	ENSGT01030000234579.A.b #24	ENSGT00940000157909 #26	ENSGT00950000185901	ENSGT01000000214434.A #27	ENSGT00670000098080 #28	ENSGT00940000155714 #29	ENSGT00950000183097.a.b #30	ENSGT01060000248594.f #31	ENSGT00940000157649 #32	ENSGT00940000162334 #33	ENSGT00390000010687.a.a #34	ENSGT00940000161292 #35	ENSGT00940000160094 #37	ENSGT00520000055625.b
Neognathae_b	ANCESTRAL SPECIES	11	ENSGT00940000155511	ENSGT00950000183022.a.a.a.t	ENSGT01100000263557.B	ENSGT00950000183022.a.a.a.s.a	ENSGT00950000183022.a.a.a.s.b	ENSGT01100000263703	ENSGT00940000162537	ENSGT00940000153313.A	ENSGT00510000048154	ENSGT00940000158872	ENSGT00940000156517	ENSGT00390000001015	ENSGT00940000160895	ENSGT00940000161449 #20	ENSGT00940000158201 #21	ENSGT00940000155481 #22	ENSGT00940000160511 #23	ENSGT01030000234579.A.b #24	ENSGT00940000157909 #26	ENSGT00950000185901	ENSGT01000000214434.A #27	ENSGT00670000098080 #28	ENSGT00940000155714 #29	ENSGT00950000183097.a.b #30	ENSGT01060000248594.f #31	ENSGT00940000157649 #32	ENSGT00940000162334 #33	ENSGT00390000010687.a.a #34	ENSGT00940000161292 #35	ENSGT00940000160094 #37	ENSGT00520000055625.b
Neognathae_c	ANCESTRAL SPECIES	13	ENSGT00390000009776	ENSGT00390000016956	ENSGT00940000155511	ENSGT00950000183022.a.a.a.s.a	ENSGT00950000183022.a.a.a.s.b	ENSGT01100000263703	ENSGT00940000167309	ENSGT00940000153313.A	ENSGT00510000048154	ENSGT00940000158872	ENSGT00940000156517	ENSGT00390000001015	ENSGT00940000160895	ENSGT00940000161449 #20	ENSGT00940000158201 #21	ENSGT00940000155481 #22	ENSGT00940000160511 #23	ENSGT01030000234579.A.b #24	ENSGT00940000157909 #26	ENSGT01000000214434.A #27	ENSGT00670000098080 #28	ENSGT00940000155714 #29	ENSGT00950000183097.a.b #30	ENSGT01060000248594.f #31	ENSGT00940000157649 #32	ENSGT00940000162334 #33	ENSGT00390000010687.a.a #34	ENSGT00940000161292 #35	ENSGT00940000160094 #37	ENSGT00520000055625.b	ENSGT01030000234558.A.a.b
Kakapo	MODERN SPECIES	25	ENSSHBG00005018427	MFF (ENSSHBG00005018429)	MRPL44 (ENSSHBG00005018431)	AGFG1 (ENSSHBG00005018435)	ENSSHBG00005018440	ENSSHBG00005018442	ENSSHBG00005018444	SPHKAP (ENSSHBG00005018448)	PID1 (ENSSHBG00005018456)	DNER (ENSSHBG00005018458)	TRIP12 (ENSSHBG00005018508)	ENSSHBG00005018605	SLC16A14 (ENSSHBG00005018607)	ZBTB38 (ENSSHBG00005018618) #20	RASA2 (ENSSHBG00005018648) #21	RNF7 (ENSSHBG00005019071) #22	GRK7 (ENSSHBG00005019075) #23	ATP1B3 (ENSSHBG00005019077) #24	TFDP2 (ENSSHBG00005019080) #26	GK5 (ENSSHBG00005019084) #27	XRN1 (ENSSHBG00005019092) #28	ATR (ENSSHBG00005019112) #29	PLS1 (ENSSHBG00005019135) #30	TRPC1 (ENSSHBG00005006476) #31	PCOLCE2 (ENSSHBG00005006524) #32	PAQR9 (ENSSHBG00005006552) #33	U2SURP (ENSSHBG00005006721) #34	CHST2 (ENSSHBG00005008417) #35	SLC9A9 (ENSSHBG00005008423) #37	DIPK2A (ENSSHBG00005008426)	ENSSHBG00005008431
Golden eagle	MODERN SPECIES	1	MFF (ENSACCG00020004992)	MRPL44 (ENSACCG00020004963)	AGFG1 (ENSACCG00020004912)	ENSACCG00020004872	ENSACCG00020004863	ENSACCG00020004856	ENSACCG00020004840	SPHKAP (ENSACCG00020004818)	PID1 (ENSACCG00020004800)	DNER (ENSACCG00020004782)	TRIP12 (ENSACCG00020004731)	FBXO36 (ENSACCG00020004683)	SLC16A14 (ENSACCG00020004670)	ENSACCG00020004666	RASA2 (ENSACCG00020004638) #21	RNF7 (ENSACCG00020004613) #22	GRK7 (ENSACCG00020004600) #23	ATP1B3 (ENSACCG00020004594) #24	TFDP2 (ENSACCG00020004582) #26	GK5 (ENSACCG00020004559) #27	XRN1 (ENSACCG00020004482) #28	ATR (ENSACCG00020004424) #29	PLS1 (ENSACCG00020004378) #30	TRPC1 (ENSACCG00020004359) #31	PCOLCE2 (ENSACCG00020004338) #32	PAQR9 (ENSACCG00020004315) #33	U2SURP (ENSACCG00020004207) #34	CHST2 (ENSACCG00020004115) #35	SLC9A9 (ENSACCG00020004104) #37	DIPK2A (ENSACCG00020004085)	PLOD2 (ENSACCG00020004053)
Passeriformes	ANCESTRAL SPECIES	9	ENSGT00390000009776	ENSGT00390000016956	ENSGT00940000155511	ENSGT00950000183022.a.a.a.t.a	ENSGT00950000183022.a.a.a.t.b	ENSGT01100000263557.B	ENSGT01100000263703	ENSGT00940000162537	ENSGT00940000153313.A	ENSGT00510000048154	ENSGT00940000158872	ENSGT00940000156517	ENSGT00940000160895	ENSGT00940000161449 #20	ENSGT00940000158201 #21	ENSGT00940000155481 #22	ENSGT00940000160511 #23	ENSGT01030000234579.A.b #24	ENSGT00940000157909 #26	ENSGT00950000185901	ENSGT01000000214434.A #27	ENSGT00670000098080 #28	ENSGT00940000155714 #29	ENSGT00950000183097.a.b #30	ENSGT01060000248594.f #31	ENSGT00940000157649 #32	ENSGT00940000162334 #33	ENSGT00390000010687.a.a #34	ENSGT00940000161292 #35	ENSGT00940000160094 #37	ENSGT00520000055625.b
Great tit	MODERN SPECIES	29	MFF (ENSPMJG00000017219)	MRPL44 (ENSPMJG00000017220)	AGFG1 (ENSPMJG00000017221)	ENSPMJG00000017222	ENSPMJG00000017223	ENSPMJG00000017224	DAW1 (ENSPMJG00000017225)	SPHKAP (ENSPMJG00000017226)	PID1 (ENSPMJG00000017230)	DNER (ENSPMJG00000017231)	TRIP12 (ENSPMJG00000017232)	SLC16A14 (ENSPMJG00000018449)	ZBTB38 (ENSPMJG00000018450) #20	ENSPMJG00000018451	RASA2 (ENSPMJG00000018452) #21	RNF7 (ENSPMJG00000018453) #22	GRK7 (ENSPMJG00000018454) #23	ATP1B3 (ENSPMJG00000018455) #24	TFDP2 (ENSPMJG00000018456) #26	GK5 (ENSPMJG00000018478) #27	XRN1 (ENSPMJG00000018509) #28	PLS1 (ENSPMJG00000018592) #30	TRPC1 (ENSPMJG00000018593) #31	PCOLCE2 (ENSPMJG00000018594) #32	PAQR9 (ENSPMJG00000018595) #33	U2SURP (ENSPMJG00000018596) #34	CHST2 (ENSPMJG00000018597) #35	SLC9A9 (ENSPMJG00000018598) #37	DIPK2A (ENSPMJG00000018599)	PLOD2 (ENSPMJG00000018603)	PLSCR1 (ENSPMJG00000018604)
Passeriformes_d	ANCESTRAL SPECIES	10	ENSGT00940000153991.a.b	ENSGT00940000161675	ENSGT00390000009776	ENSGT00390000016956	ENSGT00940000155511	ENSGT00950000183022.a.a.a.t.a	ENSGT01100000263703	ENSGT00940000167755	ENSGT00940000153313.A	ENSGT00510000048154	ENSGT00940000158872	ENSGT00940000156517	ENSGT00940000160895	ENSGT00940000161449 #20	ENSGT00940000158201 #21	ENSGT00940000155481 #22	ENSGT00940000160511 #23	ENSGT01030000234579.A.b #24	ENSGT00940000157909 #26	ENSGT00950000185901	ENSGT01000000214434.A #27	ENSGT00670000098080 #28	ENSGT00940000155714 #29	ENSGT00950000183097.a.b #30	ENSGT01060000248594.f #31	ENSGT00940000157649 #32	ENSGT00940000162334 #33	ENSGT00390000010687.a.a #34	ENSGT00940000161292 #35	ENSGT00940000160094 #37	ENSGT00520000055625.b
Passeriformes_g	ANCESTRAL SPECIES	11	ENSGT00940000161675	ENSGT00390000009776	ENSGT00390000016956	ENSGT00940000155511	ENSGT00950000183022.a.a.a.t.a	ENSGT01100000263703	ENSGT00950000183022.a.a.a.t.b	ENSGT00940000167755	ENSGT00940000153313.A	ENSGT00510000048154	ENSGT00940000158872	ENSGT00940000156517	ENSGT00940000160895	ENSGT00940000161449 #20	ENSGT00940000158201 #21	ENSGT00940000155481 #22	ENSGT00940000160511 #23	ENSGT01030000234579.A.b #24	ENSGT00940000157909 #26	ENSGT00950000185901	ENSGT01000000214434.A #27	ENSGT00670000098080 #28	ENSGT00940000155714 #29	ENSGT00950000183097.a.b #30	ENSGT01060000248594.f #31	ENSGT00940000157649 #32	ENSGT00940000162334 #33	ENSGT00390000010687.a.a #34	ENSGT00940000161292 #35	ENSGT00940000160094 #37	ENSGT00520000055625.b
Passeroidea	ANCESTRAL SPECIES	13	ENSGT00940000153991.a.b	ENSGT00940000161675	ENSGT00390000009776	ENSGT00390000016956	ENSGT00940000155511	ENSGT00950000183022.a.a.a.t.a	ENSGT01100000263703	ENSGT00940000167755	ENSGT00940000153313.A	ENSGT00510000048154	ENSGT00940000158872	ENSGT00940000156517	ENSGT00940000160895	ENSGT00940000161449 #20	ENSGT00940000158201 #21	ENSGT00940000155481 #22	ENSGT00940000160511 #23	ENSGT01030000234579.A.b #24	ENSGT00940000157909 #26	ENSGT00950000185901	ENSGT01000000214434.A #27	ENSGT00670000098080 #28	ENSGT00940000155714 #29	ENSGT00950000183097.a.b #30	ENSGT01060000248594.f #31	ENSGT00940000157649 #32	ENSGT00940000162334 #33	ENSGT00390000010687.a.a #34	ENSGT00940000161292 #35	ENSGT00940000160094 #37	ENSGT00520000055625.b
Common canary	MODERN SPECIES	10	ENSSCAG00000001494	MFF (ENSSCAG00000001487)	MRPL44 (ENSSCAG00000001482)	AGFG1 (ENSSCAG00000001464)	ENSSCAG00000001451	ENSSCAG00000001447	ENSSCAG00000001440	ENSSCAG00000001347	SPHKAP (ENSSCAG00000001312)	PID1 (ENSSCAG00000001300)	DNER (ENSSCAG00000001242)	TRIP12 (ENSSCAG00000001180)	SLC16A14 (ENSSCAG00000001152)	ZBTB38 (ENSSCAG00000001144) #20	RASA2 (ENSSCAG00000001119) #21	RNF7 (ENSSCAG00000001109) #22	GRK7 (ENSSCAG00000001105) #23	ATP1B3 (ENSSCAG00000001072) #24	TFDP2 (ENSSCAG00000001055) #26	GK5 (ENSSCAG00000000853) #27	XRN1 (ENSSCAG00000000804) #28	ATR (ENSSCAG00000000772) #29	PLS1 (ENSSCAG00000000757) #30	TRPC1 (ENSSCAG00000000743) #31	PCOLCE2 (ENSSCAG00000000701) #32	PAQR9 (ENSSCAG00000000693) #33	U2SURP (ENSSCAG00000000250) #34	SLC9A9 (ENSSCAG00000015576) #37	DIPK2A (ENSSCAG00000015570)	PLOD2 (ENSSCAG00000015557)	PLSCR1 (ENSSCAG00000015552)
Flycatcher	MODERN SPECIES	28	COL4A3 (ENSFALG00000006907)	MFF (ENSFALG00000006922)	ENSFALG00000006925	AGFG1 (ENSFALG00000006928)	ENSFALG00000006932	CCL20 (ENSFALG00000006941)	ENSFALG00000006943	SPHKAP (ENSFALG00000006947)	ENSFALG00000025683	PID1 (ENSFALG00000024642)	DNER (ENSFALG00000006959)	TRIP12 (ENSFALG00000006962)	SLC16A14 (ENSFALG00000006967)	ZBTB38 (ENSFALG00000023485) #20	RASA2 (ENSFALG00000006972) #21	RNF7 (ENSFALG00000028449) #22	GRK7 (ENSFALG00000006983) #23	ATP1B3 (ENSFALG00000006985) #24	TFDP2 (ENSFALG00000006994) #26	ENSFALG00000028977	GK5 (ENSFALG00000007016) #27	XRN1 (ENSFALG00000007021) #28	ENSFALG00000026872 #29	PLS1 (ENSFALG00000007050) #30	TRPC1 (ENSFALG00000007059) #31	PCOLCE2 (ENSFALG00000007068) #32	PAQR9 (ENSFALG00000023853) #33	U2SURP (ENSFALG00000007070) #34	CHST2 (ENSFALG00000007074) #35	SLC9A9 (ENSFALG00000007078) #37	DIPK2A (ENSFALG00000025251)
Galloanserae	ANCESTRAL SPECIES	16	ENSGT00390000009776	ENSGT00390000016956	ENSGT00940000155511	ENSGT00950000183022.a.a.a.s.a	ENSGT00950000183022.a.a.a.s.b	ENSGT01100000263557.B	ENSGT00940000162537	ENSGT00940000153313.A	ENSGT00510000048154	ENSGT00940000158872	ENSGT00940000156517	ENSGT00960000191050	ENSGT00940000160895	ENSGT00940000161449 #20	ENSGT00940000158201 #21	ENSGT00940000155481 #22	ENSGT00940000160511 #23	ENSGT01030000234579.A.b #24	ENSGT00940000157909 #26	ENSGT01000000214434.A #27	ENSGT00670000098080 #28	ENSGT00940000155714 #29	ENSGT00950000183097.a.b #30	ENSGT01060000248594.f #31	ENSGT00940000157649 #32	ENSGT00940000162334 #33	ENSGT00390000010687.a.a #34	ENSGT00940000161292 #35	ENSGT00940000160094 #37	ENSGT00520000055625.b	ENSGT01030000234558.A.a.b
Anatidae	ANCESTRAL SPECIES	40	ENSGT00390000016956	ENSGT00940000155511	ENSGT00950000183022.a.a.a.s.a	ENSGT00950000183022.a.a.a.s.b	ENSGT01100000263557.B	ENSGT01100000263703	ENSGT00940000167309	ENSGT00940000153313.A	ENSGT00510000048154	ENSGT00940000158872	ENSGT00940000156517	ENSGT00960000191050	ENSGT00940000160895	ENSGT00940000161449 #20	ENSGT00940000158201 #21	ENSGT00940000155481 #22	ENSGT00940000160511 #23	ENSGT01030000234579.A.b #24	ENSGT00940000157909 #26	ENSGT01000000214434.A #27	ENSGT00670000098080 #28	ENSGT00940000155714 #29	ENSGT00950000183097.a.b #30	ENSGT01060000248594.f #31	ENSGT00940000157649 #32	ENSGT00940000162334 #33	ENSGT00390000010687.a.a #34	ENSGT00940000161292 #35	ENSGT00940000160094 #37	ENSGT00520000055625.b	ENSGT01030000234558.A.a.b
Pink-footed goose	MODERN SPECIES	50	MFF (ENSABRG00000017168)	MRPL44 (ENSABRG00000017157)	AGFG1 (ENSABRG00000016657)	ENSABRG00000016614	ENSABRG00000016609	CCL20 (ENSABRG00000016604)	ENSABRG00000016596	SPHKAP (ENSABRG00000016555)	PID1 (ENSABRG00000016528)	DNER (ENSABRG00000016470)	TRIP12 (ENSABRG00000013171)	ENSABRG00000012882	SLC16A14 (ENSABRG00000012859)	ENSABRG00000012845 #20	RASA2 (ENSABRG00000011916) #21	RNF7 (ENSABRG00000011818) #22	GRK7 (ENSABRG00000011805) #23	ATP1B3 (ENSABRG00000011800) #24	TFDP2 (ENSABRG00000011676) #26	GK5 (ENSABRG00000011533) #27	XRN1 (ENSABRG00000009808) #28	ATR (ENSABRG00000008889) #29	PLS1 (ENSABRG00000008170) #30	TRPC1 (ENSABRG00000007498) #31	PCOLCE2 (ENSABRG00000007322) #32	PAQR9 (ENSABRG00000007290) #33	U2SURP (ENSABRG00000007035) #34	CHST2 (ENSABRG00000006966) #35	SLC9A9 (ENSABRG00000004839) #37	DIPK2A (ENSABRG00000004589)	ENSABRG00000004515
Duck	MODERN SPECIES	27	ENSAPLG00000014524	MFF (ENSAPLG00000003615)	MRPL44 (ENSAPLG00000017027)	AGFG1 (ENSAPLG00000007855)	ENSAPLG00000017361	SLC19A3 (ENSAPLG00000008141)	ENSAPLG00000029592	ENSAPLG00000008214	SPHKAP (ENSAPLG00000008536)	PID1 (ENSAPLG00000011388)	DNER (ENSAPLG00000008889)	TRIP12 (ENSAPLG00000007997)	SLC16A14 (ENSAPLG00000007923)	ZBTB38 (ENSAPLG00000023064) #20	RASA2 (ENSAPLG00000006641) #21	RNF7 (ENSAPLG00000006609) #22	GRK7 (ENSAPLG00000006289) #23	ATP1B3 (ENSAPLG00000028873) #24	TFDP2 (ENSAPLG00000005603) #26	GK5 (ENSAPLG00000005240) #27	XRN1 (ENSAPLG00000004905) #28	ENSAPLG00000018108	ENSAPLG00000023352 #29	PLS1 (ENSAPLG00000003150) #30	TRPC1 (ENSAPLG00000002664) #31	PCOLCE2 (ENSAPLG00000002646) #32	PAQR9 (ENSAPLG00000028962) #33	U2SURP (ENSAPLG00000002348) #34	CHST2 (ENSAPLG00000002346) #35	ENSAPLG00000027343	SLC9A9 (ENSAPLG00000000606) #37
Phasianidae	ANCESTRAL SPECIES	9	ENSGT00940000161675	ENSGT00390000009776.a	ENSGT00390000016956	ENSGT00940000155511	ENSGT00950000183022.a.a.a.s.a	ENSGT00950000183022.a.a.a.s.b	ENSGT01100000263557.B	ENSGT00940000162537	ENSGT00940000153313.A	ENSGT00510000048154	ENSGT00940000158872	ENSGT00940000156517	ENSGT00940000160895	ENSGT00940000161449 #20	ENSGT00940000158201 #21	ENSGT00940000155481 #22	ENSGT00940000160511 #23	ENSGT01030000234579.A.b #24	ENSGT00940000157909 #26	ENSGT01000000214434.A.c #27	ENSGT00670000098080 #28	ENSGT00940000155714 #29	ENSGT00950000183097.a.b #30	ENSGT01060000248594.f #31	ENSGT00940000157649 #32	ENSGT00940000162334 #33	ENSGT00390000010687.a.a #34	ENSGT00940000161292 #35	ENSGT00940000160094 #37	ENSGT00520000055625.b	ENSGT01030000234558.A.a.b
Japanese quail	MODERN SPECIES	27	ENSCJPG00005008098	MFF (ENSCJPG00005008103)	MRPL44 (ENSCJPG00005008104)	AGFG1 (ENSCJPG00005008105)	ENSCJPG00005008106	ENSCJPG00005008107	ENSCJPG00005008108	ENSCJPG00005008109	SPHKAP (ENSCJPG00005008110)	PID1 (ENSCJPG00005008112)	DNER (ENSCJPG00005008113)	SLC16A14 (ENSCJPG00005008199)	ENSCJPG00005008200	ZBTB38 (ENSCJPG00005008201) #20	RASA2 (ENSCJPG00005008207) #21	RNF7 (ENSCJPG00005009317) #22	GRK7 (ENSCJPG00005009318) #23	ATP1B3 (ENSCJPG00005009320) #24	TFDP2 (ENSCJPG00005009322) #26	GK5 (ENSCJPG00005009331) #27	XRN1 (ENSCJPG00005009521) #28	ATR (ENSCJPG00005011182) #29	PLS1 (ENSCJPG00005011236) #30	TRPC1 (ENSCJPG00005011279) #31	PCOLCE2 (ENSCJPG00005011380) #32	PAQR9 (ENSCJPG00005011390) #33	U2SURP (ENSCJPG00005011394) #34	CHST2 (ENSCJPG00005011802) #35	SLC9A9 (ENSCJPG00005011808) #37	DIPK2A (ENSCJPG00005012433)	PLOD2 (ENSCJPG00005012444)
Phasianidae_b	ANCESTRAL SPECIES	12	ENSGT00940000161675	ENSGT00390000009776.a	ENSGT00390000016956	ENSGT00940000155511	ENSGT00950000183022.a.a.a.s.a	ENSGT00950000183022.a.a.a.s.b	ENSGT01100000263557.B	ENSGT00940000162537	ENSGT00940000153313.A	ENSGT00510000048154	ENSGT00940000158872	ENSGT00940000156517	ENSGT00940000160895	ENSGT00940000161449 #20	ENSGT00940000158201 #21	ENSGT00940000155481 #22	ENSGT00940000160511 #23	ENSGT01030000234579.A.b #24	ENSGT00940000157909 #26	ENSGT01000000214434.A.c #27	ENSGT00670000098080 #28	ENSGT00940000155714 #29	ENSGT00950000183097.a.b #30	ENSGT01060000248594.f #31	ENSGT00940000157649 #32	ENSGT00940000162334 #33	ENSGT00390000010687.a.a #34	ENSGT00940000161292 #35	ENSGT00940000160094 #37	ENSGT00520000055625.b	ENSGT01030000234558.A.a.b
Turkey	MODERN SPECIES	2	ENSMGAG00000006549 #34	PAQR9 (ENSMGAG00000019037) #33	ENSMGAG00000006438 #31	ENSMGAG00000006503 #32	PLS1 (ENSMGAG00000006387) #30	ENSMGAG00000022658 #29	ENSMGAG00000006227 #29	ENSMGAG00000006333 #28	ENSMGAG00000006296 #27	ENSMGAG00000019178 #27	ENSMGAG00000019383	ENSMGAG00000020343	ENSMGAG00000020911 #26	ENSMGAG00000006194 #26	ATP1B3 (ENSMGAG00000006163) #24	ENSMGAG00000020143 #22	ENSMGAG00000006147 #23	RASA2 (ENSMGAG00000006040) #21	ENSMGAG00000016004 #20	ENSMGAG00000006034	ENSMGAG00000021141	ENSMGAG00000006008	ENSMGAG00000018963	ENSMGAG00000005969	ENSMGAG00000021999	ENSMGAG00000005968	ENSMGAG00000005952	ENSMGAG00000017756	ENSMGAG00000005926	ENSMGAG00000005920	ENSMGAG00000017918
Chicken	MODERN SPECIES	38	COL4A3 (ENSGALG00010023781)	MFF (ENSGALG00010026612)	MRPL44 (ENSGALG00010023811)	AGFG1 (ENSGALG00010023830)	ENSGALG00010023859	ENSGALG00010026625	CCL20 (ENSGALG00010023872)	DAW1 (ENSGALG00010023159)	SPHKAP (ENSGALG00010023168)	PID1 (ENSGALG00010023202)	DNER (ENSGALG00010026581)	TRIP12 (ENSGALG00010023215)	ZBTB38 (ENSGALG00010023274) #20	SLC16A14 (ENSGALG00010023290)	RASA2 (ENSGALG00010023887) #21	RNF7 (ENSGALG00010023910) #22	GRK7 (ENSGALG00010023921) #23	ATP1B3 (ENSGALG00010023940) #24	TFDP2 (ENSGALG00010023978) #26	GK5 (ENSGALG00010015703) #27	XRN1 (ENSGALG00010015719) #28	ATR (ENSGALG00010015749) #29	PLS1 (ENSGALG00010015774) #30	TRPC1 (ENSGALG00010015788) #31	PCOLCE2 (ENSGALG00010015809) #32	PAQR9 (ENSGALG00010015814) #33	U2SURP (ENSGALG00010015839) #34	CHST2 (ENSGALG00010015858) #35	SLC9A9 (ENSGALG00010015887) #37	C9H3orf58 (ENSGALG00010015963)	PLOD2 (ENSGALG00010016915)
Cryptodira	ANCESTRAL SPECIES	16	ENSGT00390000016956	ENSGT00940000155511	ENSGT00950000183022.a.a.a	ENSGT01100000263557.B	ENSGT00940000162537	ENSGT00940000153313.A	ENSGT00510000048154	ENSGT00940000171821	ENSGT00940000158872	ENSGT00940000156517	ENSGT00390000001015	ENSGT00940000160895	ENSGT00990000205179	ENSGT00940000161449 #20	ENSGT00940000158201 #21	ENSGT00940000155481 #22	ENSGT00940000160511 #23	ENSGT01030000234579.A.b #24	ENSGT00940000157909 #26	ENSGT01000000214434.A #27	ENSGT00670000098080 #28	ENSGT00940000155714 #29	ENSGT00950000183097.a.b #30	ENSGT01060000248594.f #31	ENSGT00940000157649 #32	ENSGT00940000162334 #33	ENSGT00390000010687.a.a #34	ENSGT00940000161292 #35	ENSGT00940000160094 #37	ENSGT00520000055625.b	ENSGT01030000234558.A.a.b
Chinese turtle	MODERN SPECIES	835	MFF (ENSPSIG00000007365)	MRPL44 (ENSPSIG00000007051)	AGFG1 (ENSPSIG00000005239)	SLC19A3 (ENSPSIG00000004915)	CCL20 (ENSPSIG00000004869)	DAW1 (ENSPSIG00000004573)	SPHKAP (ENSPSIG00000004508)	ENSPSIG00000004500	PID1 (ENSPSIG00000004495)	DNER (ENSPSIG00000004238)	TRIP12 (ENSPSIG00000010747)	FBXO36 (ENSPSIG00000010735)	SLC16A14 (ENSPSIG00000010656)	ZBTB38 (ENSPSIG00000000983) #20	RASA2 (ENSPSIG00000010107) #21	RNF7 (ENSPSIG00000009933) #22	GRK7 (ENSPSIG00000009451) #23
Testudinoidea	ANCESTRAL SPECIES	9	ENSGT00940000155511	ENSGT00950000183022.a.a.a	ENSGT01100000263703.a	ENSGT01100000263703.b	ENSGT00940000162537	ENSGT00940000153313.A	ENSGT00510000048154	ENSGT00940000171821	ENSGT00940000158872	ENSGT00940000156517	ENSGT00390000001015	ENSGT00940000160895	ENSGT00990000205179	ENSGT00940000161449 #20	ENSGT00940000158201 #21	ENSGT00940000155481 #22	ENSGT00940000160511 #23	ENSGT01030000234579.A.b #24	ENSGT00940000157909 #26	ENSGT01000000214434.A #27	ENSGT00670000098080 #28	ENSGT00940000155714 #29	ENSGT00950000183097.a.b #30	ENSGT01060000248594.f #31	ENSGT00940000157649 #32	ENSGT00940000162334 #33	ENSGT00390000010687.a.a #34	ENSGT00940000161292 #35	ENSGT00940000160094 #37	ENSGT00520000055625.b	ENSGT01030000234558.A.a.b
Testudinidae	ANCESTRAL SPECIES	7	ENSGT00940000155511	ENSGT00950000183022.a.a.a	ENSGT01100000263703.a	ENSGT01100000263703.b	ENSGT00940000162537	ENSGT00940000153313.A	ENSGT00510000048154	ENSGT00940000171821	ENSGT00940000158872	ENSGT00940000156517	ENSGT00390000001015	ENSGT00940000160895	ENSGT00990000205179	ENSGT00940000161449 #20	ENSGT00940000158201 #21	ENSGT00940000155481 #22	ENSGT00940000160511 #23	ENSGT01030000234579.A.b #24	ENSGT00940000157909 #26	ENSGT01000000214434.A #27	ENSGT00670000098080 #28	ENSGT00940000155714 #29	ENSGT00950000183097.a.b #30	ENSGT01060000248594.f #31	ENSGT00940000157649 #32	ENSGT00940000162334 #33	ENSGT00390000010687.a.a #34	ENSGT00940000161292 #35	ENSGT00940000160094 #37	ENSGT00520000055625.b	ENSGT01030000234558.A.a.b
Abingdon island giant tortoise	MODERN SPECIES	2523										TRIP12 (ENSCABG00000008940)	FBXO36 (ENSCABG00000008932)	SLC16A14 (ENSCABG00000008928)	ENSCABG00000008926	ZBTB38 (ENSCABG00000008922) #20	RASA2 (ENSCABG00000008916) #21	RNF7 (ENSCABG00000008913) #22	GRK7 (ENSCABG00000008842) #23	ATP1B3 (ENSCABG00000008837) #24	TFDP2 (ENSCABG00000008700) #26	ENSCABG00000008699	GK5 (ENSCABG00000008697) #27	XRN1 (ENSCABG00000007216) #28	ATR (ENSCABG00000006520) #29	PLS1 (ENSCABG00000006512) #30	TRPC1 (ENSCABG00000006505) #31
Goode s thornscrub tortoise	MODERN SPECIES	23	ENSGEVG00005011762	ENSGEVG00005011718	ENSGEVG00005011673	ENSGEVG00005011634	DAW1 (ENSGEVG00005011337)	SPHKAP (ENSGEVG00005011203)	PID1 (ENSGEVG00005011178)	ENSGEVG00005011129	DNER (ENSGEVG00005011021)	TRIP12 (ENSGEVG00005010850)	FBXO36 (ENSGEVG00005010790)	SLC16A14 (ENSGEVG00005010763)	ENSGEVG00005010729	ZBTB38 (ENSGEVG00005010689) #20	RASA2 (ENSGEVG00005010641) #21	RNF7 (ENSGEVG00005010596) #22	GRK7 (ENSGEVG00005010275) #23	ATP1B3 (ENSGEVG00005010202) #24	TFDP2 (ENSGEVG00005010169) #26	GK5 (ENSGEVG00005009438) #27	XRN1 (ENSGEVG00005009112) #28	ATR (ENSGEVG00005008879) #29	ENSGEVG00005008824	PLS1 (ENSGEVG00005008792) #30	TRPC1 (ENSGEVG00005008765) #31	PCOLCE2 (ENSGEVG00005008665) #32	PAQR9 (ENSGEVG00005008620) #33	U2SURP (ENSGEVG00005007971) #34	CHST2 (ENSGEVG00005007797) #35	SLC9A9 (ENSGEVG00005007763) #37	DIPK2A (ENSGEVG00005007746)
Emydidae	ANCESTRAL SPECIES	3	ENSGT00390000016956	ENSGT00940000155511	ENSGT00950000183022.a.a.a	ENSGT01100000263703.a	ENSGT01100000263703.b	ENSGT00940000162537	ENSGT00940000153313.A	ENSGT00510000048154	ENSGT00940000158872	ENSGT00940000156517	ENSGT00390000001015	ENSGT00940000160895	ENSGT00990000205179	ENSGT00940000161449 #20	ENSGT00940000158201 #21	ENSGT00940000155481 #22	ENSGT00940000160511 #23	ENSGT01030000234579.A.b #24	ENSGT00940000157909 #26	ENSGT01000000214434.A #27	ENSGT00670000098080 #28	ENSGT00940000155714 #29	ENSGT00950000183097.a.b #30	ENSGT01060000248594.f #31	ENSGT00940000157649 #32	ENSGT00940000162334 #33	ENSGT00390000010687.a.a #34	ENSGT00940000161292 #35	ENSGT00940000160094 #37	ENSGT00520000055625.b	ENSGT01030000234558.A.a.b
Three-toed box turtle	MODERN SPECIES	32	AGFG1 (ENSTMTG00000015943)	ENSTMTG00000015980	ENSTMTG00000015993	ENSTMTG00000016003	ENSTMTG00000016016	DAW1 (ENSTMTG00000016040)	SPHKAP (ENSTMTG00000016188)	PID1 (ENSTMTG00000016823)	DNER (ENSTMTG00000016833)	TRIP12 (ENSTMTG00000016885)	FBXO36 (ENSTMTG00000017039)	SLC16A14 (ENSTMTG00000017050)	ENSTMTG00000017056	RASA2 (ENSTMTG00000017225) #21	ENSTMTG00000019449	RNF7 (ENSTMTG00000019474) #22	GRK7 (ENSTMTG00000019502) #23	ATP1B3 (ENSTMTG00000019721) #24	TFDP2 (ENSTMTG00000019753) #26	GK5 (ENSTMTG00000019887) #27	XRN1 (ENSTMTG00000019913) #28	ATR (ENSTMTG00000019972) #29	PLS1 (ENSTMTG00000020021) #30	TRPC1 (ENSTMTG00000020038) #31	PCOLCE2 (ENSTMTG00000020055) #32	PAQR9 (ENSTMTG00000020066) #33	U2SURP (ENSTMTG00000020082) #34	CHST2 (ENSTMTG00000020129) #35	SLC9A9 (ENSTMTG00000020136) #37	DIPK2A (ENSTMTG00000020145)	PLOD2 (ENSTMTG00000020153)
painted turtle	DUPLICATION
painted turtle	MODERN SPECIES	776				SUMO3 (ENSCPBG00000000990)	UBE2G2 (ENSCPBG00000000961)	TSPEAR (ENSCPBG00000000821)	LRRC3 (ENSCPBG00000000788)	TRPM2 (ENSCPBG00000000683)	CFAP410 (ENSCPBG00000000638)	PFKL (ENSCPBG00000000606)	ENSCPBG00000000582	DNAJB11 (ENSCPBG00000000567)	TBCCD1 (ENSCPBG00000000555)	ENSCPBG00000000543	CRYGS (ENSCPBG00000000526)	RNF7 (ENSCPBG00000000507) #22	SOX14 (ENSCPBG00000000488)	CLDN18 (ENSCPBG00000000452)	DZIP1L (ENSCPBG00000000430)	ENSCPBG00000000416	ENSCPBG00000000310	EPHB1 (ENSCPBG00000000252)	KY (ENSCPBG00000000215)	CEP63 (ENSCPBG00000000191)	ANAPC13 (ENSCPBG00000000166)	AMOTL2 (ENSCPBG00000000153)	RYK (ENSCPBG00000000129)	SLCO2A1 (ENSCPBG00000021408)	RAB6B (ENSCPBG00000021406)	ENSCPBG00000021403	LTF (ENSCPBG00000021401)
painted turtle	MODERN SPECIES	768																ENSCPBG00000001731 #22	GRK7 (ENSCPBG00000001801) #23	ATP1B3 (ENSCPBG00000002160) #24	TFDP2 (ENSCPBG00000002199) #26	GK5 (ENSCPBG00000002311) #27	ATR (ENSCPBG00000008903) #29	PLS1 (ENSCPBG00000008914) #30	TRPC1 (ENSCPBG00000008916) #31	PCOLCE2 (ENSCPBG00000008919) #32	PAQR9 (ENSCPBG00000008921) #33	U2SURP (ENSCPBG00000008969) #34	CHST2 (ENSCPBG00000011801) #35	SLC9A9 (ENSCPBG00000011803) #37	DIPK2A (ENSCPBG00000011813)	PLOD2 (ENSCPBG00000011834)	PLSCR1 (ENSCPBG00000011847)
Anura	ANCESTRAL SPECIES	191				ENSGT00390000009776	ENSGT00510000048154	ENSGT00940000158872	ENSGT00940000156517	ENSGT00390000001015	ENSGT00940000160895	ENSGT00510000050180	ENSGT00940000161449 #20	ENSGT00940000158201 #21	ENSGT00940000154035.a	ENSGT01030000234579.A.a ##24	ENSGT00950000183153.c.a	ENSGT00940000155481 #22	ENSGT00940000160511 #23	ENSGT01030000234579.A.b #24	ENSGT00940000157909 #26	ENSGT01000000214434.A #27
Frog	MODERN SPECIES	5	ENSXETG00000037822	mrpl44 (ENSXETG00000014771)	tm4sf20 (ENSXETG00000014770)	agfg1 (ENSXETG00000014768)	ENSXETG00000030969	mff (ENSXETG00000014760)	pid1 (ENSXETG00000014759)	dner (ENSXETG00000014758)	trip12 (ENSXETG00000014757)	fbxo36 (ENSXETG00000026827)	ENSXETG00000035418	slc16a14 (ENSXETG00000033091)	zbtb38 (ENSXETG00000014756) #20	rasa2 (ENSXETG00000014755) #21	ENSXETG00000030812	rnf7 (ENSXETG00000014753) #22	grk7 (ENSXETG00000014752) #23	atp1b3 (ENSXETG00000014751) #24	tfdp2 (ENSXETG00000014750) #26	gk5 (ENSXETG00000023572) #27	rnf168 (ENSXETG00000003128)	ubxn7 (ENSXETG00000003125)	TM4SF19 (ENSXETG00000037144)	neu4 (ENSXETG00000003122)	gal3st2 (ENSXETG00000015660)	ENSXETG00000032419	ENSXETG00000035170	aqp12a (ENSXETG00000033558)	pak2 (ENSXETG00000011808)	nrros (ENSXETG00000032133)	fbxo45 (ENSXETG00000040149) ##18
Leishan spiny toad	MODERN SPECIES	7	ENSLLEG00000004893	SERPINE2 (ENSLLEG00000004875)	ENSLLEG00000004816	ENSLLEG00000004809	ENSLLEG00000004784	ENSLLEG00000014155	EPHA4 (ENSLLEG00000013216)	ENSLLEG00000013166	PAX3 (ENSLLEG00000012827)	ENSLLEG00000012801	ENSLLEG00000012778	ENSLLEG00000012743	ZBTB38 (ENSLLEG00000012712) #20	RASA2 (ENSLLEG00000012570) #21	ENSLLEG00000012376	RNF7 (ENSLLEG00000012275) #22	GRK7 (ENSLLEG00000012216) #23	ATP1B3 (ENSLLEG00000012052) #24	ENSLLEG00000012028	TFDP2 (ENSLLEG00000011769) #26	GK5 (ENSLLEG00000011475) #27	NEU4 (ENSLLEG00000010728)	ENSLLEG00000010634	ENSLLEG00000010607	ENSLLEG00000010572	ENSLLEG00000010562	ENSLLEG00000010537	ENSLLEG00000010515	PAK2 (ENSLLEG00000010354)	ENSLLEG00000010318	PIGX (ENSLLEG00000010176)
Coelacanth	MODERN SPECIES	1069																RNF7 (ENSLACG00000004066) #22	GRK7 (ENSLACG00000004533) #23	ATP1B3 (ENSLACG00000005279) #24	TFDP2 (ENSLACG00000006246) #26	GK5 (ENSLACG00000008129) #27	XRN1 (ENSLACG00000009020) #28	ATR (ENSLACG00000009886) #29	PLS1 (ENSLACG00000011086) #30	TRPC1 (ENSLACG00000011455) #31	PCOLCE2 (ENSLACG00000011980) #32	U2SURP (ENSLACG00000012318) #34	CHST2 (ENSLACG00000012735) #35
Actinopterygii	ANCESTRAL SPECIES	41	ENSGT01030000234590.A.a.b	ENSGT00940000155511	ENSGT00950000185427	ENSGT00950000183022.a.a.a	ENSGT00950000183022.a.a.b.a	ENSGT00940000162537	ENSGT00940000153313.A	ENSGT00510000048154	ENSGT00940000158872	ENSGT00940000156517	ENSGT00390000001015	ENSGT00940000160895	ENSGT00510000050180	ENSGT00940000161449 #20	ENSGT00940000158201 #21	ENSGT00940000155481 #22	ENSGT00940000160511 #23	ENSGT01030000234579.A.b #24	ENSGT00940000157909 #26	ENSGT01000000214434.A #27	ENSGT00670000098080 #28	ENSGT00940000155714 #29	ENSGT00950000183097.a.b #30	ENSGT01060000248594.f #31	ENSGT00940000157649 #32	ENSGT00390000010687.a.a #34	ENSGT00940000161292 #35	ENSGT00940000160094 #37	ENSGT00520000055625.b	ENSGT01030000234558.A.a.b	ENSGT00940000154435
Neopterygii	ANCESTRAL SPECIES	12	ENSGT00950000183022.a.a.a	ENSGT00950000183022.a.a.b.a	ENSGT00940000162537	ENSGT00940000153313.A	ENSGT00510000048154	ENSGT00940000158872	ENSGT00940000156517	ENSGT00390000001015	ENSGT00940000160895	ENSGT00510000050180	ENSGT00940000161449 #20	ENSGT00940000158201 #21	ENSGT00940000154035.a	ENSGT00940000160889	ENSGT00530000068221	ENSGT00940000155481 #22	ENSGT00940000160511 #23	ENSGT01030000234579.A.b #24	ENSGT00940000157909 #26	ENSGT01000000214434.A #27	ENSGT00670000098080 #28	ENSGT00940000155714 #29	ENSGT00950000183097.a.b #30	ENSGT01060000248594.f #31	ENSGT00940000157649 #32	ENSGT00390000010687.a.a #34	ENSGT00940000161292 #35	ENSGT00940000160094 #37	ENSGT00520000055625.b	ENSGT01030000234558.A.a.b	ENSGT00940000165699.B
Osteoglossocephalai	ANCESTRAL SPECIES	100	ENSGT00390000009776.p	ENSGT00940000155511.n.b	ENSGT00950000183022.a.a.a	ENSGT00950000183022.a.a.b.a	ENSGT00940000162537	ENSGT00940000153313.A	ENSGT00510000048154	ENSGT00940000158872	ENSGT00940000156517	ENSGT00390000001015	ENSGT00940000161449 #20	ENSGT00940000158201 #21	ENSGT00940000160889	ENSGT00530000068221	ENSGT00980000203106	ENSGT00940000155481 #22	ENSGT00940000160511.b #23
Clupeocephala	ANCESTRAL SPECIES	75	ENSGT00390000016956	ENSGT00940000155511.n.a	ENSGT00950000185427	ENSGT00950000183022.a.a.a	ENSGT00950000183022.a.a.b.a	ENSGT00940000162537	ENSGT00940000153313.A	ENSGT00510000048154	ENSGT00940000158872	ENSGT00940000156517	ENSGT00390000001015.d	ENSGT00940000161449 #20	ENSGT00940000158201 #21	ENSGT00940000154035.a	ENSGT00940000160889	ENSGT00940000155481 #22	ENSGT00940000160511.b #23	ENSGT00940000161226.a	ENSGT00940000156831	ENSGT00390000002172.A.a.f
Otomorpha	ANCESTRAL SPECIES	186	ENSGT00940000156971.A	ENSGT00390000009776.o	ENSGT00390000016956	ENSGT00940000155511.n.a	ENSGT00950000183022.a.a.a	ENSGT00950000183022.a.a.b.a	ENSGT00940000162537	ENSGT00940000153313.A	ENSGT00510000048154	ENSGT00940000158872	ENSGT00940000156517	ENSGT00390000001015.d	ENSGT00940000161449 #20	ENSGT00940000158201 #21	ENSGT00940000160889	ENSGT00940000155481 #22	ENSGT00940000160511.b #23	ENSGT00940000161226.a	ENSGT00940000156831	ENSGT00390000002172.A.a.f	ENSGT00390000003912	ENSGT00390000011725.d.ab	ENSGT00940000156484.a	ENSGT00940000157454	ENSGT00940000155666.d	ENSGT00390000018039
Clupeiformes	ANCESTRAL SPECIES	404					ENSGT00950000183022.a.a.b.a	ENSGT00940000162537	ENSGT00940000153313.A	ENSGT00950000183022.a.a.a	ENSGT00510000048154	ENSGT00940000158872	ENSGT00940000156517	ENSGT00390000001015.d	ENSGT00940000161449 #20	ENSGT00940000158201 #21	ENSGT00940000160889	ENSGT00940000155481 #22
Denticle herring	MODERN SPECIES	10	b3gat1a (ENSDCDG00000031376)	ENSDCDG00000031383	siae (ENSDCDG00000031384)	ENSDCDG00000031388	tbrg1 (ENSDCDG00000031391)	cfap45 (ENSDCDG00000031401)	gemin7 (ENSDCDG00000031404)	bmp16 (ENSDCDG00000031406)	ppp1r37 (ENSDCDG00000031408)	ENSDCDG00000031429	ENSDCDG00000031430	tsen34 (ENSDCDG00000031432)	bcl7bb (ENSDCDG00000031435)	baz1b (ENSDCDG00000031440)	ENSDCDG00000031445	rnf7 (ENSDCDG00000031446) #22	agfg1a (ENSDCDG00000031448)	slc19a3b (ENSDCDG00000031462)	ENSDCDG00000031465	daw1 (ENSDCDG00000031469)	sphkap (ENSDCDG00000031480)	ENSDCDG00000031491	pid1 (ENSDCDG00000031495)	dner (ENSDCDG00000031497)	ZBTB38 (ENSDCDG00000031757) #20	RASA2 (ENSDCDG00000031805) #21	ENSDCDG00000032421	fzd9b (ENSDCDG00000032424)	GRK7 (ENSDCDG00000032427) #23	mrpl44 (ENSDCDG00000032446)	mffa (ENSDCDG00000032448)
Atlantic herring	MODERN SPECIES	25	mrps23 (ENSCHAG00000025579)	msi2b (ENSCHAG00000025591)	akap1b (ENSCHAG00000025653)	NF1 (ENSCHAG00000025818)	OMG (ENSCHAG00000000389)	lgals9l5 (ENSCHAG00000000430)	KSR1 (ENSCHAG00000001161)	wsb1 (ENSCHAG00000002160)	pid1 (ENSCHAG00000002196)	dner (ENSCHAG00000002245)	trip12 (ENSCHAG00000002859)	fbxo36a (ENSCHAG00000006109)	ZBTB38 (ENSCHAG00000006114) #20	RASA2 (ENSCHAG00000006137) #21	ENSCHAG00000006813	rnf7 (ENSCHAG00000006880) #22	ENSCHAG00000006911	ENSCHAG00000007100	AXL (ENSCHAG00000007181)	MBNL1 (ENSCHAG00000008667)	SUCNR1 (ENSCHAG00000008902)	ENSCHAG00000008930	AADAC (ENSCHAG00000008974)	IGSF10 (ENSCHAG00000008994)	p2ry12 (ENSCHAG00000009264)	ENSCHAG00000009266	ENSCHAG00000009279	ENSCHAG00000009293	ENSCHAG00000009483	ENSCHAG00000009499	ENSCHAG00000009516
Otophysi	ANCESTRAL SPECIES	346																ENSGT00940000155481 #22	ENSGT00940000160511.b #23	ENSGT00940000161226.a	ENSGT00940000156831	ENSGT00390000002172.A.a.f	ENSGT00390000003912	ENSGT00390000011725.d.ab	ENSGT00940000156484.a	ENSGT00940000157454	ENSGT00940000155666.d	ENSGT00390000018039
Cyprinoidei	ANCESTRAL SPECIES	110																ENSGT00940000155481 #22	ENSGT00940000160511.b #23	ENSGT00940000161226.a	ENSGT00940000156831	ENSGT00390000002172.A.a.f	ENSGT00390000003912	ENSGT00390000011725.d.ab	ENSGT00940000159135.g	ENSGT01100000263515.a.b.a.a.c	ENSGT00390000018660	ENSGT00940000156517	ENSGT01070000253972.a	ENSGT00390000001015.d	ENSGT00940000158052.a.h	ENSGT00940000158201 #21	ENSGT00940000160889
Cyprininae	DUPLICATION
Cyprininae	ANCESTRAL SPECIES	30	ENSGT00530000063174.b.c	ENSGT00940000153348.C.g	ENSGT00950000183147.A.b.a.b	ENSGT00940000160551.b	ENSGT00390000009795.t	ENSGT00940000159883.c	ENSGT00940000155288.b.x.b.b	ENSGT00940000160033.c.a	ENSGT00390000007046.b.a.b.a.b	ENSGT00940000166445	ENSGT00390000013374.b	ENSGT00730000111174	ENSGT00940000155492.a.b.i.a	ENSGT00940000159713.i	ENSGT01060000248588.a.d.a.h.a.a	ENSGT00940000155481.a #22	ENSGT00940000160511.b.f #23	ENSGT00940000161226.a.b	ENSGT00940000156831.c	ENSGT00390000002172.A.a.f.a	ENSGT00390000003912	ENSGT00390000011725.d.ab	ENSGT00940000159135.g.a	ENSGT00940000168131	ENSGT00390000018660.j	ENSGT01100000263515.a.b.a.a.c.b	ENSGT00940000156517.ab	ENSGT01070000253972.a	ENSGT00940000158052.a.h.a.b	ENSGT00940000158201.c #21
Goldfish	MODERN SPECIES	37	bckdha (ENSCARG00000068424)	exosc5 (ENSCARG00000068451)	TMEM91 (ENSCARG00000068464)	ppp1r13l (ENSCARG00000068477)	opa3 (ENSCARG00000068487)	rasgrp4 (ENSCARG00000068500)	ryr1b (ENSCARG00000068568)	itpkcb (ENSCARG00000068764)	snrpa (ENSCARG00000068770)	ENSCARG00000068796	tbrg1 (ENSCARG00000068814)	cfap45 (ENSCARG00000068870)	ENSCARG00000068890	pgr (ENSCARG00000068944)	ENSCARG00000068981	rnf7 (ENSCARG00000069001) #22	ENSCARG00000069007 #23	fzd9b (ENSCARG00000069015)	baz1b (ENSCARG00000069049)	bcl7bb (ENSCARG00000069207)	tsen34 (ENSCARG00000069209)	selenot1b (ENSCARG00000069211)	ccnl1a (ENSCARG00000069231)	ankrd67 (ENSCARG00000069293)	veph1 (ENSCARG00000069300)	PTX3 (ENSCARG00000069343)	ENSCARG00000069350	trip12 (ENSCARG00000054246)	ENSCARG00000061780	RASA2 (ENSCARG00000061827) #21	KIFC3 (ENSCARG00000062826)
Cyprininae_a	ANCESTRAL SPECIES	105	ENSGT00940000164481.b.b.h.a	ENSGT00530000063252.a.a.d.b	ENSGT00940000158740.d	ENSGT00950000182996.b.a.a.b.d.a.f.a.a.a.b.b	ENSGT00940000157114.e	ENSGT00730000110915.a.b	ENSGT01050000244848.B.a.a.c	ENSGT00900000141067.r	ENSGT00940000156933.d.a.a.b	ENSGT00390000007968	ENSGT00940000158183.b	ENSGT00940000155492.a.b.i.a	ENSGT00940000159713.i	ENSGT01060000248588.a.d.a.g	ENSGT01060000248588.a.d.a.h.a.a	ENSGT00940000155481.a #22	ENSGT00940000160511.b.f #23	ENSGT00940000161226.a.b	ENSGT00940000156831.c	ENSGT00390000002172.A.a.f.a	ENSGT00390000003912	ENSGT00390000011725.d.ab	ENSGT00940000159135.g.a	ENSGT00390000018660.j	ENSGT01100000263515.a.b.a.a.c.b	ENSGT00940000156517.ab	ENSGT01070000253972.a	ENSGT00940000158052.a.h.a.b	ENSGT00940000158201.c #21	ENSGT00940000160889.a
Common carp reference	MODERN SPECIES	9	aplp2 (ENSCCRG00000063896)	prdm10 (ENSCCRG00000064957)	ENSCCRG00000025554	cdon (ENSCCRG00000040169)	bcl9l (ENSCCRG00000012597)	ENSCCRG00000055799	DDX6 (ENSCCRG00000057038)	ENSCCRG00000074196	ENSCCRG00000033634	ttc36 (ENSCCRG00000009731)	cntn5 (ENSCCRG00000076564)	ENSCCRG00000043716	pgr (ENSCCRG00000002719)	ENSCCRG00000076134	ENSCCRG00000006172	rnf7 (ENSCCRG00000064216) #22	fzd9b (ENSCCRG00000074535)	baz1b (ENSCCRG00000040577)	bcl7bb (ENSCCRG00000079634)	tsen34 (ENSCCRG00000028614)	ccnl1a (ENSCCRG00000028624)	PTX3 (ENSCCRG00000041317)	veph1 (ENSCCRG00000029195)	trip12 (ENSCCRG00000032976)	ENSCCRG00000072235	ENSCCRG00000047292	ENSCCRG00000039131 #21	ENSCCRG00000078527	ENSCCRG00000048362	pglyrp5 (ENSCCRG00000053377)	ENSCCRG00000072335
Golden-line barbel	MODERN SPECIES	620													ENSSGRG00000040202	pgr (ENSSGRG00000040217)	ENSSGRG00000040224	rnf7 (ENSSGRG00000040225) #22	grk7b (ENSSGRG00000040230) #23	fzd9b (ENSSGRG00000040242)	fzd9b (ENSSGRG00000040244)	baz1b (ENSSGRG00000040247)	bcl7bb (ENSSGRG00000040276)	tsen34 (ENSSGRG00000040279)	selenot1b (ENSSGRG00000040282)	ccnl1a (ENSSGRG00000040288)	ENSSGRG00000040576	veph1 (ENSSGRG00000040577)	PTX3 (ENSSGRG00000040578)	trip12 (ENSSGRG00000040627)	ENSSGRG00000042806	RASA2 (ENSSGRG00000042820) #21	ENSSGRG00000043794
Cyprininae	ANCESTRAL SPECIES	78	ENSGT00940000164481.b.b.h.b	ENSGT00530000063252.a.a.d.a	ENSGT00940000158740.c	ENSGT00940000157114.f	ENSGT00730000110915.a.a	ENSGT01050000244848.B.a.a.d	ENSGT00900000141067.q	ENSGT00390000006949	ENSGT00980000198620	ENSGT00940000156933.d.a.a.a	ENSGT00950000183204.a.b	ENSGT00940000158183.a	ENSGT00940000155492.a.b.i.b	ENSGT00940000159713.j	ENSGT01060000248588.a.d.a.h.a.b	ENSGT00940000155481.b #22	ENSGT00940000160511.b.e #23	ENSGT00940000161226.a.a	ENSGT00940000156831.d	ENSGT00390000002172.A.a.f.b	ENSGT00940000159135.g.b	ENSGT00940000169328.a.a	ENSGT00390000018660.i	ENSGT01100000263515.a.b.a.a.c.a	ENSGT00940000156517.`b	ENSGT00390000001015.d	ENSGT00940000158052.a.h.a.a	ENSGT00940000158201.d.a #21	ENSGT00940000160889.b	ENSGT00530000068221	ENSGT00940000160889.a
Goldfish	MODERN SPECIES	9	rbm7 (ENSCARG00000039057)	BARX2 (ENSCARG00000039047)	ENSCARG00000039042	insyn1 (ENSCARG00000039037)	ENSCARG00000039032	loxl1 (ENSCARG00000039013)	SCAMP5 (ENSCARG00000039007)	ENSCARG00000038997	ABCC8 (ENSCARG00000031971)	mob2b (ENSCARG00000031798)	DUSP8 (ENSCARG00000031775)	cntn5 (ENSCARG00000031654)	ENSCARG00000031091	pgr (ENSCARG00000031039)	ENSCARG00000030951	rnf7 (ENSCARG00000030925) #22	grk7b (ENSCARG00000030913) #23	fzd9b (ENSCARG00000030902)	baz1b (ENSCARG00000030772)	bcl7bb (ENSCARG00000030736)	ccnl1a (ENSCARG00000030487)	ENSCARG00000030457	ENSCARG00000030449	PTX3 (ENSCARG00000030440)	veph1 (ENSCARG00000030366)	trip12 (ENSCARG00000017830)	fbxo36a (ENSCARG00000017379)	ENSCARG00000017351	RASA2 (ENSCARG00000016710) #21	ENSCARG00000016675	polr2i (ENSCARG00000016656)
Cyprininae_a	ANCESTRAL SPECIES	156	ENSGT00940000164481.b.b.h.b	ENSGT00530000063252.a.a.d.a	ENSGT00940000158740.c	ENSGT00940000157114.f	ENSGT00730000110915.a.a	ENSGT01050000244848.B.a.a.d	ENSGT00900000141067.q	ENSGT00390000006949	ENSGT00980000198620	ENSGT00940000156933.d.a.a.a	ENSGT00950000183204.a.b	ENSGT00940000158183.a	ENSGT00940000155492.a.b.i.b	ENSGT00940000159713.j	ENSGT01060000248588.a.d.a.h.a.b	ENSGT00940000155481.b #22	ENSGT00940000160511.b.e #23	ENSGT00940000161226.a.a	ENSGT00940000156831.d	ENSGT00390000002172.A.a.f.b	ENSGT00940000159135.g.b	ENSGT00940000169328.a.a	ENSGT00390000018660.i	ENSGT01100000263515.a.b.a.a.c.a	ENSGT00940000156517.`b	ENSGT00390000001015.d	ENSGT00940000158052.a.h.a.a	ENSGT00940000158201.d.a #21	ENSGT00940000160889.b	ENSGT00530000068221	ENSGT00550000075063
Golden-line barbel	MODERN SPECIES	875														ARHGAP42 (ENSSGRG00000018384)	pgr (ENSSGRG00000020002)	rnf7 (ENSSGRG00000020026) #22	grk7b (ENSSGRG00000020030) #23	fzd9b (ENSSGRG00000020032)	baz1b (ENSSGRG00000020045)	bcl7bb (ENSSGRG00000020434)	ENSSGRG00000020435	ccnl1a (ENSSGRG00000020436)	ENSSGRG00000020441	veph1 (ENSSGRG00000020442)	PTX3 (ENSSGRG00000020443)
Common carp reference	MODERN SPECIES	19	prdm10 (ENSCCRG00000037067)	cdon (ENSCCRG00000039963)	bcl9l (ENSCCRG00000049755)	CXCR5 (ENSCCRG00000064828)	DDX6 (ENSCCRG00000030582)	TREH (ENSCCRG00000000938)	ENSCCRG00000066358	ENSCCRG00000015117	ENSCCRG00000042497	ENSCCRG00000053243	ENSCCRG00000064318	cntn5 (ENSCCRG00000079597)	ENSCCRG00000056117	pgr (ENSCCRG00000006098)	ENSCCRG00000006081	rnf7 (ENSCCRG00000006076) #22	grk7b (ENSCCRG00000070678) #23	fzd9b (ENSCCRG00000077839)	baz1b (ENSCCRG00000044255)	bcl7bb (ENSCCRG00000040600)	ccnl1a (ENSCCRG00000075281)	veph1 (ENSCCRG00000071982)	PTX3 (ENSCCRG00000031111)	trip12 (ENSCCRG00000019568)	fbxo36a (ENSCCRG00000055346)	ENSCCRG00000004709	ENSCCRG00000047310 #21	ENSCCRG00000031948	ENSCCRG00000056227	polr2i (ENSCCRG00000024088)	pglyrp5 (ENSCCRG00000024093)
Zebrafish	MODERN SPECIES	9	si:ch211-151h10.2 (ENSDARG00000068250)	ENSDARG00000095386	ENSDARG00000113774	cdon (ENSDARG00000061328)	bcl9l (ENSDARG00000055054)	CXCR5 (ENSDARG00000010514)	DDX6 (ENSDARG00000061338)	TREH (ENSDARG00000077911)	ENSDARG00000105447	NECTIN1 (ENSDARG00000086034)	ttc36 (ENSDARG00000011693)	cntn5 (ENSDARG00000021584)	ARHGAP42 (ENSDARG00000010654)	pgr (ENSDARG00000035966)	ENSDARG00000067730	rnf7 (ENSDARG00000055524) #22	grk7b (ENSDARG00000055534) #23	fzd9b (ENSDARG00000014673)	baz1b (ENSDARG00000102832)	bcl7bb (ENSDARG00000040396)	tsen34 (ENSDARG00000061370)	selenot1b (ENSDARG00000027595)	ccnl1a (ENSDARG00000055124)	ankrd67 (ENSDARG00000068274)	PTX3 (ENSDARG00000068275)	veph1 (ENSDARG00000031095)	trip12 (ENSDARG00000061397)	fbxo36a (ENSDARG00000010662)	ENSDARG00000100607	RASA2 (ENSDARG00000078775) #21	ENSDARG00000076050
Characiphysae	ANCESTRAL SPECIES	143																ENSGT00940000155481 #22	ENSGT00940000160511.b #23	ENSGT00940000161226.a	ENSGT00940000156831	ENSGT00390000002172.A.a.f	ENSGT00390000003912	ENSGT00390000011725.d.ab	ENSGT00940000156484.a	ENSGT00940000157454	ENSGT00940000155666.d	ENSGT00390000018039	ENSGT00940000159713	ENSGT00940000155492.a.b	ENSGT00940000158183	ENSGT00950000183204.a.b	ENSGT00390000007968
Channel catfish	MODERN SPECIES	23	KCNJ1 (ENSIPUG00000009103)	KCNJ1 (ENSIPUG00000009090)	KCNJ1 (ENSIPUG00000009076)	KCNJ1 (ENSIPUG00000009062)	KCNJ1 (ENSIPUG00000009058)	ENSIPUG00000009020	ENSIPUG00000008958	ENSIPUG00000008930	itpkc (ENSIPUG00000008893)	c4h19orf54 (ENSIPUG00000008872)	snrpa (ENSIPUG00000008841)	ENSIPUG00000008786	tbrg1 (ENSIPUG00000008697)	cfap45 (ENSIPUG00000008656)	ENSIPUG00000008644	rnf7 (ENSIPUG00000008611) #22	Fzd9 (ENSIPUG00000008594)	baz1b (ENSIPUG00000008427)	bcl7bb (ENSIPUG00000008374)	tsen34 (ENSIPUG00000008359)	zgc:77752 (ENSIPUG00000008339)	odf3b (ENSIPUG00000008260)	ENSIPUG00000008236	ENSIPUG00000008203	Rabl2 (ENSIPUG00000008148)	ENSIPUG00000008125	ENSIPUG00000008115	shank3 (ENSIPUG00000007970)	ENSIPUG00000007924	arsa (ENSIPUG00000007893)	PGC (ENSIPUG00000007865)
Characiphysae_b	ANCESTRAL SPECIES	130																ENSGT00940000155481 #22	ENSGT00940000160511.b #23	ENSGT00940000161226.a	ENSGT00940000156831	ENSGT00390000002172.A.a.f	ENSGT00390000003912	ENSGT01050000244883.A.a.a.b.d	ENSGT00390000011725.d.ab	ENSGT00940000156484.a	ENSGT00940000157454	ENSGT00940000155666.d	ENSGT00390000018039	ENSGT00940000159713	ENSGT00940000155492.a.b	ENSGT00940000158183	ENSGT00950000183204.a.b
Electric eel	MODERN SPECIES	147		ENSEEEG00000022941	ENSEEEG00000022922	ets1 (ENSEEEG00000022896)	fli1 (ENSEEEG00000022895)	KCNJ1 (ENSEEEG00000022894)	KCNJ1 (ENSEEEG00000022893)	KCNJ1 (ENSEEEG00000022892)	ENSEEEG00000022890	zgc:153119 (ENSEEEG00000022872)	snrpa (ENSEEEG00000022870)	ENSEEEG00000022869	tbrg1 (ENSEEEG00000022862)	cfap45 (ENSEEEG00000022860)	ENSEEEG00000022857	rnf7 (ENSEEEG00000022855) #22	fzd9b (ENSEEEG00000022853)	baz1b (ENSEEEG00000022851)	bcl7bb (ENSEEEG00000022850)	tsen34 (ENSEEEG00000022849)	prss1 (ENSEEEG00000022848)	selenot1b (ENSEEEG00000022846)	ENSEEEG00000022845	ppp1r37 (ENSEEEG00000022835)	bmp16 (ENSEEEG00000022792)	gemin7 (ENSEEEG00000022788)	pgr (ENSEEEG00000022786)	ARHGAP42 (ENSEEEG00000022781)	cntn5 (ENSEEEG00000022776)
Characoidei	ANCESTRAL SPECIES	158																ENSGT00940000155481 #22	ENSGT00940000160511.b #23	ENSGT00940000161226.a	ENSGT00940000156831	ENSGT00390000002172.A.a.f	ENSGT00390000003912	ENSGT01050000244883.A.a.a.b.d	ENSGT00390000011725.d.ab	ENSGT00940000156484.a	ENSGT00940000157454	ENSGT00940000155666.d	ENSGT00390000018039	ENSGT00940000159713	ENSGT00940000155492.a.b	ENSGT00940000158183	ENSGT00950000183204.a.b
Mexicana tetra	MODERN SPECIES	9	ENSAMXG00000008167	ENSAMXG00000008116	ENSAMXG00000008233	ENSAMXG00000008269	itpkcb (ENSAMXG00000030446)	zgc:153119 (ENSAMXG00000033521)	snrpa (ENSAMXG00000032885)	ENSAMXG00000035143	ENSAMXG00000038521	tbrg1 (ENSAMXG00000008381)	ENSAMXG00000035319	ENSAMXG00000038747	cfap45 (ENSAMXG00000036939)	ENSAMXG00000031757	ENSAMXG00000017551	rnf7 (ENSAMXG00000029464) #22	grk7b (ENSAMXG00000017560) #23	fzd9b (ENSAMXG00000025852)	baz1b (ENSAMXG00000017565)	bcl7bb (ENSAMXG00000037935)	tsen34 (ENSAMXG00000017568)	prss1 (ENSAMXG00000038312)	selenot1b (ENSAMXG00000034878)	ENSAMXG00000041433	ppp1r37 (ENSAMXG00000017578)	bmp16 (ENSAMXG00000040784)	gemin7 (ENSAMXG00000025854)	ENSAMXG00000036878	cntn5 (ENSAMXG00000005969)	ARHGAP42 (ENSAMXG00000005790)	ENSAMXG00000033917
Red-bellied piranha	MODERN SPECIES	79					ENSPNAG00000028170	itpkcb (ENSPNAG00000006276)	zgc:153119 (ENSPNAG00000004319)	snrpa (ENSPNAG00000028209)	ENSPNAG00000028226	ENSPNAG00000028236	tbrg1 (ENSPNAG00000028332)	cfap45 (ENSPNAG00000028452)	ENSPNAG00000005526	ENSPNAG00000004938	ENSPNAG00000004374	rnf7 (ENSPNAG00000028554) #22	grk7b (ENSPNAG00000028573) #23	fzd9b (ENSPNAG00000005284)	baz1b (ENSPNAG00000004401)	bcl7bb (ENSPNAG00000028692)	tsen34 (ENSPNAG00000028698)	prss1 (ENSPNAG00000028990)	selenot1b (ENSPNAG00000029028)	ENSPNAG00000029035	ppp1r37 (ENSPNAG00000029048)	bmp16 (ENSPNAG00000006174)	gemin7 (ENSPNAG00000029101)	pgr (ENSPNAG00000029105)	ARHGAP42 (ENSPNAG00000029320)	cntn5 (ENSPNAG00000029496)	FBXO40 (ENSPNAG00000006231)
Euteleosteomorpha	ANCESTRAL SPECIES	85	ENSGT00390000016956	ENSGT00940000155511.n.a	ENSGT00950000185427	ENSGT00950000183022.a.a.a	ENSGT00950000183022.a.a.b.a	ENSGT00940000162537	ENSGT00940000153313.A	ENSGT00510000048154	ENSGT00940000158872	ENSGT00940000156517	ENSGT00390000001015.d	ENSGT00940000161449 #20	ENSGT00940000158201 #21	ENSGT00940000154035.a	ENSGT00940000160889	ENSGT00940000155481 #22	ENSGT00940000160511.b #23	ENSGT00940000161226.a	ENSGT00940000156831	ENSGT00390000002172.A.a.f	ENSGT00940000153594.d	ENSGT00940000164942.b	ENSGT00940000156673	ENSGT00390000007848.a.c	ENSGT00940000156847.a	ENSGT00940000166275	ENSGT00940000159596	ENSGT00590000083134.a.b	ENSGT00940000155066.e.a	ENSGT00940000157469	ENSGT00940000177884
Acanthomorphata	ANCESTRAL SPECIES	69	ENSGT00390000009776.o	ENSGT00940000158494	ENSGT00390000016956	ENSGT00940000155511.n.a	ENSGT00950000183022.a.a.a	ENSGT00950000183022.a.a.b.a	ENSGT00940000162537	ENSGT00940000153313.A	ENSGT00510000048154	ENSGT00940000158872	ENSGT00940000156517	ENSGT00390000001015.d	ENSGT00940000161449 #20	ENSGT00940000158201 #21	ENSGT00940000160889	ENSGT00940000155481 #22	ENSGT00940000160511.b #23	ENSGT00940000161226.a	ENSGT00940000156831	ENSGT00390000002172.A.a.f	ENSGT00940000153594.d	ENSGT00940000164942.b	ENSGT00940000156673	ENSGT00390000007848.a.c	ENSGT00940000156847.a	ENSGT00940000166275	ENSGT00940000159596	ENSGT00590000083134.a.b	ENSGT00940000155066.e.a	ENSGT00940000159817	ENSGT00940000174692.a
Euacanthomorphacea	ANCESTRAL SPECIES	8	ENSGT00390000009776.o	ENSGT00940000158494	ENSGT00390000016956	ENSGT00940000155511.n.a	ENSGT00950000183022.a.a.a	ENSGT00950000183022.a.a.b.a	ENSGT00940000162537	ENSGT00940000153313.A	ENSGT00510000048154	ENSGT00940000158872	ENSGT00940000156517	ENSGT00390000001015.d	ENSGT00940000161449 #20	ENSGT00940000158201 #21	ENSGT00940000160889	ENSGT00940000155481 #22	ENSGT00940000160511.b #23	ENSGT00940000161226.a	ENSGT00940000156831	ENSGT00390000002172.A.a.f	ENSGT00940000153594.d	ENSGT00940000164942.b	ENSGT00940000156673	ENSGT00390000007848.a.c	ENSGT00940000156847.a	ENSGT00940000166275	ENSGT00940000159596	ENSGT00590000083134.a.b	ENSGT00940000155066.e.a	ENSGT00940000159817	ENSGT00940000174692.a
Percomorphaceae	DUPLICATION
Percomorphaceae	DUPLICATION
Percomorphaceae	ANCESTRAL SPECIES																	ENSGT00940000155481.c.a #22
Tiger tail seahorse	MODERN SPECIES	628																rnf7 (ENSHCOG00000010262) #22
Percomorphaceae_B	ANCESTRAL SPECIES																	ENSGT00940000155481.c.a #22
Ovalentaria	ANCESTRAL SPECIES																	ENSGT00940000155481.c.a #22
Ovalentaria_B	ANCESTRAL SPECIES																	ENSGT00940000155481.c.a #22
Cichlidae	ANCESTRAL SPECIES																	ENSGT00940000155481.c.a #22
Pseudocrenilabrinae	ANCESTRAL SPECIES																	ENSGT00940000155481.c.a #22
Pseudocrenilabrinae_A	ANCESTRAL SPECIES																	ENSGT00940000155481.c.a #22
Haplochromini	ANCESTRAL SPECIES																	ENSGT00940000155481.c.a #22
Haplochromini_A	ANCESTRAL SPECIES																	ENSGT00940000155481.c.a #22
Haplochromini_B	ANCESTRAL SPECIES	9	ENSGT00940000158494	ENSGT00390000016956	ENSGT00940000155511.n.a	ENSGT00950000183022.a.a.a.e	ENSGT00950000183022.a.a.a.f	ENSGT00950000183022.a.a.b.a	ENSGT00940000162537	ENSGT00940000153313.A	ENSGT00510000048154	ENSGT00940000158872	ENSGT00940000156517	ENSGT00390000001015.d	ENSGT00940000161449 #20	ENSGT00940000158201 #21	ENSGT00940000160889	ENSGT00940000155481.c.a #22	ENSGT00940000155481.d #22	ENSGT00940000160511.b #23	ENSGT00940000161226.a	ENSGT00940000156831	ENSGT00390000002172.A.a.f	ENSGT00940000153594.d	ENSGT00940000164942.b	ENSGT00940000156673	ENSGT00390000007848.a.c	ENSGT00940000156847.a	ENSGT00940000166275	ENSGT00940000159596	ENSGT00590000083134.a.b	ENSGT00940000155066.e.a	ENSGT00940000159817
Zebra mbuna	MODERN SPECIES	1096	ENSMZEG00005010573	ENSMZEG00005010564	ENSMZEG00005010538	ENSMZEG00005010519	slc19a3b (ENSMZEG00005008753)	daw1 (ENSMZEG00005008686)	sphkap (ENSMZEG00005008646)	pid1 (ENSMZEG00005008627)	dner (ENSMZEG00005008604)	trip12 (ENSMZEG00005008424)	fbxo36a (ENSMZEG00005008321)	ZBTB38 (ENSMZEG00005008311) #20	RASA2 (ENSMZEG00005008267) #21	ENSMZEG00005008241	ENSMZEG00005008229	rnf7 (ENSMZEG00005008213) #22	grk7b (ENSMZEG00005008128) #23	fzd9b (ENSMZEG00005008105)	baz1b (ENSMZEG00005008055)	bcl7bb (ENSMZEG00005008035)	ENSMZEG00005008015	hip1 (ENSMZEG00005007963)	ENSMZEG00005007946	gdpd1 (ENSMZEG00005007933)	tmem120ab (ENSMZEG00005007914)	ENSMZEG00005007889	porb (ENSMZEG00005007864)	taf15 (ENSMZEG00005007852)	MMP28 (ENSMZEG00005007839)	ENSMZEG00005007833	cul3b (ENSMZEG00005007773)
Percomorphaceae	ANCESTRAL SPECIES																	ENSGT00940000155481.c.b #22
Tiger tail seahorse	MODERN SPECIES	345	MECOM (ENSHCOG00000012725)	ENSHCOG00000012768	megf6 (ENSHCOG00000012814)	mffa (ENSHCOG00000012858)	dnaaf1 (ENSHCOG00000000779)	mrpl44 (ENSHCOG00000012902)	agfg1a (ENSHCOG00000012922)	slc19a3b (ENSHCOG00000000374)	daw1 (ENSHCOG00000012986)	sphkap (ENSHCOG00000013026)	pid1 (ENSHCOG00000013045)	dner (ENSHCOG00000000844)	trip12 (ENSHCOG00000013143)	ZBTB38 (ENSHCOG00000013168) #20	RASA2 (ENSHCOG00000013207) #21	rnf7 (ENSHCOG00000013239) #22	grk7b (ENSHCOG00000013267) #23	fzd9b (ENSHCOG00000013276)	baz1b (ENSHCOG00000013324)	ENSHCOG00000013336	bcl7bb (ENSHCOG00000013340)	ENSHCOG00000013350	hip1 (ENSHCOG00000013668)	ENSHCOG00000013708	gdpd1 (ENSHCOG00000013756)	tmem120ab (ENSHCOG00000013795)	porb (ENSHCOG00000013841)	ENSHCOG00000013873	MMP28 (ENSHCOG00000013878)	ENSHCOG00000013897	cul3a (ENSHCOG00000013949)
Percomorphaceae	ANCESTRAL SPECIES	8	ENSGT00390000009776.o	ENSGT00940000158494	ENSGT00390000016956	ENSGT00940000155511.n.a	ENSGT00950000183022.a.a.a	ENSGT00950000183022.a.a.b.a	ENSGT00940000162537	ENSGT00940000153313.A	ENSGT00510000048154	ENSGT00940000158872	ENSGT00940000156517	ENSGT00390000001015.d	ENSGT00940000161449 #20	ENSGT00940000158201 #21	ENSGT00940000160889	ENSGT00940000155481.d #22	ENSGT00940000160511.b #23	ENSGT00940000161226.a	ENSGT00940000156831	ENSGT00390000002172.A.a.f	ENSGT00940000153594.d	ENSGT00940000164942.b	ENSGT00940000156673	ENSGT00390000007848.a.c	ENSGT00940000156847.a	ENSGT00940000166275	ENSGT00940000159596	ENSGT00590000083134.a.b	ENSGT00940000155066.e.a	ENSGT00940000159817	ENSGT00940000174692.a
Percomorphaceae_B	ANCESTRAL SPECIES	13	ENSGT00390000009776.o	ENSGT00940000158494	ENSGT00390000016956	ENSGT00940000155511.n.a	ENSGT00950000183022.a.a.a	ENSGT00950000183022.a.a.b.a	ENSGT00940000162537	ENSGT00940000153313.A	ENSGT00510000048154	ENSGT00940000158872	ENSGT00940000156517	ENSGT00390000001015.d	ENSGT00940000161449 #20	ENSGT00940000158201 #21	ENSGT00940000160889	ENSGT00940000155481.d #22	ENSGT00940000160511.b #23	ENSGT00940000161226.a	ENSGT00940000156831	ENSGT00390000002172.A.a.f	ENSGT00940000153594.d	ENSGT00940000164942.b	ENSGT00940000156673	ENSGT00390000007848.a.c	ENSGT00940000156847.a	ENSGT00940000166275	ENSGT00940000159596	ENSGT00590000083134.a.b	ENSGT00940000155066.e.a	ENSGT00940000159817	ENSGT00940000174692.a
Ovalentaria	ANCESTRAL SPECIES	8	ENSGT00390000009776.o	ENSGT00940000158494	ENSGT00390000016956	ENSGT00940000155511.n.a	ENSGT00950000183022.a.a.a	ENSGT00950000183022.a.a.b.a	ENSGT00940000162537	ENSGT00940000153313.A	ENSGT00510000048154	ENSGT00940000158872	ENSGT00940000156517	ENSGT00390000001015.d	ENSGT00940000161449 #20	ENSGT00940000158201 #21	ENSGT00940000160889	ENSGT00940000155481.d #22	ENSGT00940000160511.b #23	ENSGT00940000161226.a	ENSGT00940000156831	ENSGT00390000002172.A.a.f	ENSGT00940000153594.d	ENSGT00940000164942.b	ENSGT00940000156673	ENSGT00390000007848.a.c	ENSGT00940000156847.a	ENSGT00940000166275	ENSGT00940000159596	ENSGT00590000083134.a.b	ENSGT00940000155066.e.a	ENSGT00940000159817	ENSGT00940000174692.a
Atherinomorphae	ANCESTRAL SPECIES	15	ENSGT00390000009776.o	ENSGT00940000158494	ENSGT00390000016956	ENSGT00940000155511.n.a	ENSGT00950000183022.a.a.a	ENSGT00950000183022.a.a.b.a	ENSGT00940000162537	ENSGT00940000153313.A	ENSGT00510000048154	ENSGT00940000158872	ENSGT00940000156517	ENSGT00390000001015.d	ENSGT00940000161449 #20	ENSGT00940000158201 #21	ENSGT00940000160889	ENSGT00940000155481.d #22	ENSGT00940000160511.b #23	ENSGT00940000161226.a	ENSGT00940000156831	ENSGT00390000002172.A.a.f	ENSGT00940000153594.d	ENSGT00940000164942.b	ENSGT00940000156673	ENSGT00390000007848.a.c	ENSGT00940000156847.a	ENSGT00940000166275	ENSGT00940000159596	ENSGT00590000083134.a.b	ENSGT00940000155066.e.a	ENSGT00940000159817	ENSGT00940000157424
Oryzias	ANCESTRAL SPECIES	8	ENSGT00940000159256.o	ENSGT00390000009776.o	ENSGT00940000158494	ENSGT00390000016956	ENSGT00940000155511.n.a	ENSGT00950000183022.a.a.a	ENSGT00950000183022.a.a.b.a	ENSGT00940000162537	ENSGT00940000153313.A	ENSGT00510000048154	ENSGT00940000158872	ENSGT00940000156517	ENSGT00940000161449 #20	ENSGT00940000158201 #21	ENSGT00940000160889	ENSGT00940000155481.d #22	ENSGT00940000160511.b #23	ENSGT00940000161226.a	ENSGT00940000156831	ENSGT00390000002172.A.a.f	ENSGT00940000153594.d	ENSGT00940000164942.b	ENSGT00940000156673	ENSGT00390000007848.a.c	ENSGT00940000156847.a	ENSGT00940000166275	ENSGT00940000159596	ENSGT00590000083134.a.b	ENSGT00940000155066.e.a	ENSGT00940000159817	ENSGT00940000157424
Oryzias_b	ANCESTRAL SPECIES	14	ENSGT00390000009776.o	ENSGT00940000158494	ENSGT00390000016956	ENSGT00940000155511.n.a	ENSGT00950000183022.a.a.a	ENSGT00950000183022.a.a.b.a	ENSGT00940000172375	ENSGT00940000153313.A	ENSGT00510000048154	ENSGT00940000158872	ENSGT00940000156517	ENSGT00940000158052.a.h	ENSGT00940000161449 #20	ENSGT00940000158201 #21	ENSGT00980000203106	ENSGT00940000155481.d #22	ENSGT00940000160511.b #23	ENSGT00940000161226.a	ENSGT00940000156831	ENSGT00390000002172.A.a.f	ENSGT00940000153594.d	ENSGT00940000164942.b	ENSGT00940000156673	ENSGT00390000007848.a.c	ENSGT00940000156847.a	ENSGT00940000166275	ENSGT00940000159596	ENSGT00590000083134.a.b	ENSGT00940000155066.e.a	ENSGT00940000159817	ENSGT00940000157424
Indian medaka	MODERN SPECIES	12	mrpl44 (ENSOMEG00000003920)	ENSOMEG00000003915	agfg1a (ENSOMEG00000003910)	SLC19A3 (ENSOMEG00000000089)	slc19a3b (ENSOMEG00000003864)	ENSOMEG00000003843	sphkap (ENSOMEG00000000836)	ENSOMEG00000000082	pid1 (ENSOMEG00000003753)	dner (ENSOMEG00000003746)	trip12 (ENSOMEG00000003723)	ENSOMEG00000003672	RASA2 (ENSOMEG00000003659) #21	ENSOMEG00000003607	ENSOMEG00000003449	rnf7 (ENSOMEG00000003434) #22	grk7b (ENSOMEG00000003413) #23	fzd9b (ENSOMEG00000003368)	baz1b (ENSOMEG00000003346)	bcl7bb (ENSOMEG00000003264)	hip1 (ENSOMEG00000003233)	ENSOMEG00000003165	gdpd1 (ENSOMEG00000003147)	tmem120ab (ENSOMEG00000003125)	porb (ENSOMEG00000003101)	taf15 (ENSOMEG00000003065)	MMP28 (ENSOMEG00000003055)	ENSOMEG00000003035	cul3b (ENSOMEG00000003016)	PDE2A (ENSOMEG00000002986)	ARAP1 (ENSOMEG00000002959)
Javanese ricefish	MODERN SPECIES	4	ENSOJAG00000011326	mffa (ENSOJAG00000011338)	ENSOJAG00000011362	mrpl44 (ENSOJAG00000011370)	agfg1a (ENSOJAG00000011384)	slc19a3b (ENSOJAG00000011438)	ENSOJAG00000011596	sphkap (ENSOJAG00000011747)	ENSOJAG00000011790	pid1 (ENSOJAG00000011807)	dner (ENSOJAG00000011824)	ENSOJAG00000011904	ENSOJAG00000015577 #20	RASA2 (ENSOJAG00000015681) #21	ENSOJAG00000016229	rnf7 (ENSOJAG00000016259) #22	grk7b (ENSOJAG00000016340) #23	fzd9b (ENSOJAG00000016909)	baz1b (ENSOJAG00000016949)	bcl7bb (ENSOJAG00000017023)	hip1 (ENSOJAG00000017057)	ENSOJAG00000017361	gdpd1 (ENSOJAG00000017371)	tmem120ab (ENSOJAG00000017383)	POR (ENSOJAG00000017436)	ENSOJAG00000017598	MMP28 (ENSOJAG00000017611)	FAM124B (ENSOJAG00000017620)	cul3b (ENSOJAG00000017654)	PDE2A (ENSOJAG00000018093)	ARAP1 (ENSOJAG00000018885)
Oryzias_a	ANCESTRAL SPECIES	8	ENSGT00940000156971.A	ENSGT00390000009776.o	ENSGT00940000158494	ENSGT00390000016956	ENSGT00940000155511.n.a	ENSGT00950000183022.a.a.a	ENSGT00950000183022.a.a.b.a	ENSGT00940000162537	ENSGT00940000153313.A	ENSGT00510000048154	ENSGT00940000158872	ENSGT00940000156517	ENSGT00940000161449 #20	ENSGT00940000158201 #21	ENSGT00940000160889	ENSGT00940000155481.d #22	ENSGT00940000160511.b #23	ENSGT00940000161226.a	ENSGT00940000156831	ENSGT00390000002172.A.a.f	ENSGT00940000153594.d	ENSGT00940000164942.b	ENSGT00940000156673	ENSGT00390000007848.a.c	ENSGT00940000156847.a	ENSGT00940000166275	ENSGT00940000159596	ENSGT00590000083134.a.b	ENSGT00940000155066.e.a	ENSGT00940000159817	ENSGT00940000157424
Chinese medaka	MODERN SPECIES	725	MECOM (ENSOSIG00000012456)	ENSOSIG00000012441	megf6 (ENSOSIG00000012434)	mffa (ENSOSIG00000012421)	dnaaf1 (ENSOSIG00000012417)	mrpl44 (ENSOSIG00000012414)	agfg1a (ENSOSIG00000012407)	daw1 (ENSOSIG00000012398)	sphkap (ENSOSIG00000012385)	pid1 (ENSOSIG00000012377)	dner (ENSOSIG00000012363)	trip12 (ENSOSIG00000008201)	ENSOSIG00000008152	RASA2 (ENSOSIG00000000977) #21	ENSOSIG00000000868	rnf7 (ENSOSIG00000000861) #22	grk7b (ENSOSIG00000000854) #23	fzd9b (ENSOSIG00000000848)	baz1b (ENSOSIG00000000739)	bcl7bb (ENSOSIG00000000701)	ENSOSIG00000017268	gdpd1 (ENSOSIG00000017264)	tmem120ab (ENSOSIG00000016687)	porb (ENSOSIG00000016330)	taf15 (ENSOSIG00000016318)	MMP28 (ENSOSIG00000016313)	FAM124B (ENSOSIG00000016308)	cul3b (ENSOSIG00000016188)	PDE2A (ENSOSIG00000016180)	ARAP1 (ENSOSIG00000015615)	stard10 (ENSOSIG00000015603)
Japanese Medaka HdrR	MODERN SPECIES	4	megf6 (ENSORLG00000011989)	mffa (ENSORLG00000011938)	dnaaf1 (ENSORLG00000025596)	mrpl44 (ENSORLG00000011871)	agfg1a (ENSORLG00000011859)	SLC19A3 (ENSORLG00000011814)	slc19a3b (ENSORLG00000027805)	daw1 (ENSORLG00000011792)	sphkap (ENSORLG00000011771)	pid1 (ENSORLG00000022835)	dner (ENSORLG00000011748)	trip12 (ENSORLG00000011737)	ZBTB38 (ENSORLG00000011660) #20	RASA2 (ENSORLG00000011646) #21	ENSORLG00000030491	rnf7 (ENSORLG00000011622) #22	grk7b (ENSORLG00000011609) #23	fzd9b (ENSORLG00000011586)	baz1b (ENSORLG00000011574)	bcl7bb (ENSORLG00000011546)	ENSORLG00000022159	ENSORLG00000027231	hip1 (ENSORLG00000011517)	ENSORLG00000029645	gdpd1 (ENSORLG00000011464)	tmem120ab (ENSORLG00000011423)	POR (ENSORLG00000011398)	taf15 (ENSORLG00000011382)	MMP28 (ENSORLG00000011349)	FAM124B (ENSORLG00000011343)	cul3b (ENSORLG00000011336)
Cyprinodontiformes	ANCESTRAL SPECIES	12	ENSGT00390000009776.o	ENSGT00940000158494	ENSGT00390000016956	ENSGT00940000155511.n.a	ENSGT00950000183022.a.a.a	ENSGT00950000183022.a.a.b.a	ENSGT00940000162537	ENSGT00940000153313.A	ENSGT00510000048154	ENSGT00940000158872	ENSGT00940000156517	ENSGT00390000001015.d	ENSGT00940000161449 #20	ENSGT00940000158201 #21	ENSGT00940000160889	ENSGT00940000155481.d #22	ENSGT00940000160511.b #23	ENSGT00940000161226.a	ENSGT00940000156831	ENSGT00390000002172.A.a.f	ENSGT00940000153594.d	ENSGT00940000164942.b	ENSGT00940000156673	ENSGT00390000007848.a.c	ENSGT00940000156847.a	ENSGT00940000166275	ENSGT00940000159596	ENSGT00590000083134.a.b	ENSGT00940000155066.e.a	ENSGT00940000159817	ENSGT00940000157424
Cyprinodontoidei	ANCESTRAL SPECIES	9	ENSGT00390000009776.o	ENSGT00940000158494	ENSGT00390000016956	ENSGT00940000155511.n.a	ENSGT00950000183022.a.a.a	ENSGT00950000183022.a.a.b.a	ENSGT00940000162537	ENSGT00940000153313.A	ENSGT00510000048154	ENSGT00940000158872	ENSGT00940000156517	ENSGT00390000001015.d	ENSGT00940000161449 #20	ENSGT00940000158201 #21	ENSGT00940000160889	ENSGT00940000155481.d #22	ENSGT00940000160511.b #23	ENSGT00940000161226.a	ENSGT00940000156831	ENSGT00390000002172.A.a.f	ENSGT00940000153594.d	ENSGT00940000164942.b	ENSGT00940000156673	ENSGT00390000007848.a.c	ENSGT00940000156847.a	ENSGT00940000166275	ENSGT00940000159596	ENSGT00590000083134.a.b	ENSGT00940000155066.e.a	ENSGT00940000159817	ENSGT00940000157424
Poeciliinae	ANCESTRAL SPECIES	14	ENSGT00390000009776.o	ENSGT00940000158494	ENSGT00390000016956	ENSGT00940000155511.n.a	ENSGT00950000183022.a.a.a	ENSGT00950000183022.a.a.b.a	ENSGT00940000162537	ENSGT00940000153313.A	ENSGT00510000048154	ENSGT00940000158872	ENSGT00940000156517	ENSGT00390000001015.d	ENSGT00940000161449 #20	ENSGT00940000158201 #21	ENSGT00940000160889	ENSGT00940000155481.d #22	ENSGT00940000160511.b #23	ENSGT00940000161226.a	ENSGT00940000156831	ENSGT00390000002172.A.a.f	ENSGT00940000153594.d	ENSGT00940000164942.b	ENSGT00940000156673	ENSGT00390000007848.a.c	ENSGT00940000156847.a	ENSGT00940000166275	ENSGT00940000159596	ENSGT00590000083134.a.b	ENSGT00940000155066.e.a	ENSGT00940000159817	ENSGT00940000157424
Poecilia	ANCESTRAL SPECIES	2	ENSGT00390000009776.o	ENSGT00940000158494	ENSGT00390000016956	ENSGT00940000155511.n.a	ENSGT00950000183022.a.a.a	ENSGT00950000183022.a.a.b.a	ENSGT00940000172375	ENSGT00940000153313.A	ENSGT00510000048154	ENSGT00940000158872	ENSGT00940000156517	ENSGT00390000001015.d	ENSGT00940000161449 #20	ENSGT00940000158201 #21	ENSGT00940000160889	ENSGT00940000155481.d #22	ENSGT00940000160511.b #23	ENSGT00940000161226.a	ENSGT00940000156831	ENSGT00390000002172.A.a.f	ENSGT00940000153594.d	ENSGT00940000164942.b	ENSGT00940000156673	ENSGT00390000007848.a.c	ENSGT00940000156847.a	ENSGT00940000166275	ENSGT00940000159596	ENSGT00590000083134.a.b	ENSGT00940000155066.e.a	ENSGT00940000159817	ENSGT00940000157424
Guppy	MODERN SPECIES	443	mffa (ENSPREG00000017621)	ENSPREG00000017641	mrpl44 (ENSPREG00000017644)	agfg1a (ENSPREG00000017678)	SLC19A3 (ENSPREG00000017763)	slc19a3b (ENSPREG00000017793)	ENSPREG00000017811	sphkap (ENSPREG00000017860)	pid1 (ENSPREG00000017909)	dner (ENSPREG00000017923)	trip12 (ENSPREG00000017996)	fbxo36a (ENSPREG00000018178)	ZBTB38 (ENSPREG00000018227) #20	RASA2 (ENSPREG00000018244) #21	ENSPREG00000018295	rnf7 (ENSPREG00000018334) #22	grk7b (ENSPREG00000018345) #23	fzd9b (ENSPREG00000018360)	baz1b (ENSPREG00000018374)	bcl7bb (ENSPREG00000018472)	hip1 (ENSPREG00000018519)	ENSPREG00000018587	gdpd1 (ENSPREG00000018611)	tmem120ab (ENSPREG00000018647)	porb (ENSPREG00000018682)	taf15 (ENSPREG00000018762)	MMP28 (ENSPREG00000018784)	ENSPREG00000018799	cul3b (ENSPREG00000018825)	PDE2A (ENSPREG00000018900)	ARAP1 (ENSPREG00000019122)
NAME_6	ANCESTRAL SPECIES	83	ENSGT00390000009776.o	ENSGT00940000158494	ENSGT00390000016956	ENSGT00940000155511.n.a	ENSGT00950000183022.a.a.a	ENSGT00950000183022.a.a.b.a	ENSGT00940000172375	ENSGT00940000153313.A	ENSGT00510000048154	ENSGT00940000158872	ENSGT00940000156517	ENSGT00390000001015.d	ENSGT00940000161449 #20	ENSGT00940000158201 #21	ENSGT00940000160889	ENSGT00940000155481.d #22	ENSGT00940000160511.b #23	ENSGT00940000161226.a	ENSGT00940000156831	ENSGT00390000002172.A.a.f	ENSGT00940000153594.d	ENSGT00940000164942.b	ENSGT00940000156673	ENSGT00390000007848.a.c	ENSGT00940000156847.a	ENSGT00940000166275	ENSGT00940000159596	ENSGT00590000083134.a.b	ENSGT00940000155066.e.a	ENSGT00940000159817	ENSGT00940000157424
Sailfin molly	MODERN SPECIES	157	ENSPLAG00000000301	mffa (ENSPLAG00000013041)	dnaaf1 (ENSPLAG00000013009)	mrpl44 (ENSPLAG00000012992)	agfg1a (ENSPLAG00000012975)	SLC19A3 (ENSPLAG00000012746)	ENSPLAG00000012370	sphkap (ENSPLAG00000012339)	pid1 (ENSPLAG00000012314)	dner (ENSPLAG00000012292)	trip12 (ENSPLAG00000012174)	fbxo36a (ENSPLAG00000012062)	ZBTB38 (ENSPLAG00000012016) #20	RASA2 (ENSPLAG00000011990) #21	ENSPLAG00000011891	rnf7 (ENSPLAG00000011847) #22	grk7b (ENSPLAG00000011829) #23	fzd9b (ENSPLAG00000011767)	baz1b (ENSPLAG00000011745)	bcl7bb (ENSPLAG00000011670)	hip1 (ENSPLAG00000011638)
Amazon molly	MODERN SPECIES	405																rnf7 (ENSPFOG00000011632) #22	grk7b (ENSPFOG00000011569) #23	fzd9b (ENSPFOG00000020742)	baz1b (ENSPFOG00000011249)	bcl7bb (ENSPFOG00000011213)	hip1 (ENSPFOG00000011056)	gdpd1 (ENSPFOG00000011036)	ENSPFOG00000011008	gdpd1 (ENSPFOG00000010895)	tmem120ab (ENSPFOG00000022505)	porb (ENSPFOG00000010601)	taf15 (ENSPFOG00000022773)	MMP28 (ENSPFOG00000010494)	ENSPFOG00000010473	cul3b (ENSPFOG00000010374)	PDE2A (ENSPFOG00000021686)
Platyfish	MODERN SPECIES	9	mffa (ENSXMAG00000010780)	ENSXMAG00000010785	mrpl44 (ENSXMAG00000010787)	agfg1a (ENSXMAG00000010790)	SLC19A3 (ENSXMAG00000010801)	slc19a3b (ENSXMAG00000021000)	daw1 (ENSXMAG00000010806)	sphkap (ENSXMAG00000010815)	pid1 (ENSXMAG00000021164)	dner (ENSXMAG00000010820)	trip12 (ENSXMAG00000010830)	fbxo36a (ENSXMAG00000010852)	ZBTB38 (ENSXMAG00000026956) #20	RASA2 (ENSXMAG00000010855) #21	ENSXMAG00000010897	rnf7 (ENSXMAG00000026480) #22	grk7b (ENSXMAG00000010903) #23	fzd9b (ENSXMAG00000017101)	baz1b (ENSXMAG00000010907)	bcl7bb (ENSXMAG00000010917)	hip1 (ENSXMAG00000010922)	ENSXMAG00000010954	gdpd1 (ENSXMAG00000010955)	tmem120ab (ENSXMAG00000010965)	porb (ENSXMAG00000010967)	taf15 (ENSXMAG00000010983)	MMP28 (ENSXMAG00000010985)	ENSXMAG00000010989	cul3b (ENSXMAG00000010990)	PDE2A (ENSXMAG00000011011)	ARAP1 (ENSXMAG00000011055)
NAME_4	ANCESTRAL SPECIES	48	ENSGT00390000009776.o	ENSGT00940000158494	ENSGT00390000016956	ENSGT00940000155511.n.a	ENSGT00950000183022.a.a.a	ENSGT00950000183022.a.a.b.a	ENSGT00940000172375	ENSGT00940000153313.A	ENSGT00510000048154	ENSGT00940000158872	ENSGT00940000156517	ENSGT00390000001015.d	ENSGT00940000161449 #20	ENSGT00940000158201 #21	ENSGT00940000160889	ENSGT00940000155481.d #22	ENSGT00940000160511.b #23	ENSGT00940000161226.a	ENSGT00940000156831	ENSGT00390000002172.A.a.f	ENSGT00940000153594.d	ENSGT00940000164942.b	ENSGT00940000156673	ENSGT00390000007848.a.c	ENSGT00940000156847.a	ENSGT00940000166275	ENSGT00940000159596	ENSGT00590000083134.a.b	ENSGT00940000155066.e.a	ENSGT00940000159817	ENSGT00940000157424
Mummichog	MODERN SPECIES	1590	megf6 (ENSFHEG00000002159)	mffa (ENSFHEG00000002168)	ENSFHEG00000002171	mrpl44 (ENSFHEG00000002174)	agfg1a (ENSFHEG00000002182)	SLC19A3 (ENSFHEG00000002257)	slc19a3b (ENSFHEG00000002284)	ENSFHEG00000002322	sphkap (ENSFHEG00000002343)	pid1 (ENSFHEG00000002350)	dner (ENSFHEG00000002370)	trip12 (ENSFHEG00000002426)	fbxo36a (ENSFHEG00000002447)	ZBTB38 (ENSFHEG00000002457) #20	RASA2 (ENSFHEG00000002492) #21	rnf7 (ENSFHEG00000002500) #22	grk7b (ENSFHEG00000002525) #23	fzd9b (ENSFHEG00000002536)	baz1b (ENSFHEG00000002592)	bcl7bb (ENSFHEG00000002616)	hip1 (ENSFHEG00000002633)	ENSFHEG00000002651	gdpd1 (ENSFHEG00000002693)	tmem120ab (ENSFHEG00000002716)	porb (ENSFHEG00000002763)	taf15 (ENSFHEG00000002789)	MMP28 (ENSFHEG00000002830)	ENSFHEG00000002842	cul3b (ENSFHEG00000002854)	PDE2A (ENSFHEG00000000083)	ARAP1 (ENSFHEG00000002903)
Sheepshead minnow	MODERN SPECIES	187	ENSCVAG00000018799	mffa (ENSCVAG00000018751)	ENSCVAG00000018731	mrpl44 (ENSCVAG00000018722)	agfg1a (ENSCVAG00000018715)	SLC19A3 (ENSCVAG00000018683)	slc19a3b (ENSCVAG00000018521)	ENSCVAG00000018376	sphkap (ENSCVAG00000018259)	pid1 (ENSCVAG00000018164)	dner (ENSCVAG00000018152)	trip12 (ENSCVAG00000018138)	ZBTB38 (ENSCVAG00000017988) #20	RASA2 (ENSCVAG00000017969) #21	ENSCVAG00000017822	rnf7 (ENSCVAG00000017801) #22	grk7b (ENSCVAG00000017781) #23	fzd9b (ENSCVAG00000017702)	baz1b (ENSCVAG00000017687)	bcl7bb (ENSCVAG00000017564)	ENSCVAG00000017469
Aplocheiloidei	ANCESTRAL SPECIES	8	ENSGT00940000159256.o	ENSGT00940000156971.A	ENSGT00390000009776.o	ENSGT00940000158494	ENSGT00390000016956	ENSGT00940000155511.n.a	ENSGT00950000183022.a.a.a	ENSGT00950000183022.a.a.b.a	ENSGT00940000167755	ENSGT00940000153313.A	ENSGT00510000048154	ENSGT00940000158872	ENSGT00940000156517	ENSGT00940000161449 #20	ENSGT00940000158201 #21	ENSGT00940000155481.d #22	ENSGT00940000160511.b #23	ENSGT00940000161226.a	ENSGT00940000156831	ENSGT00390000002172.A.a.f	ENSGT00940000153594.d	ENSGT00940000164942.b	ENSGT00940000156673	ENSGT00390000007848.a.c	ENSGT00940000156847.a	ENSGT00940000166275	ENSGT00940000159596	ENSGT00590000083134.a.b	ENSGT00940000155066.e.a	ENSGT00940000159817	ENSGT00940000157424
Turquoise killifish	MODERN SPECIES	1615	ENSNFUG00015011556	mffa (ENSNFUG00015011545)	ENSNFUG00015011517	MRPL44 (ENSNFUG00015011510)	agfg1a (ENSNFUG00015011414)	SLC19A3 (ENSNFUG00015011374)	slc19a3b (ENSNFUG00015011367)	WDR69 (ENSNFUG00015011196)	sphkap (ENSNFUG00015011155)	PID1 (ENSNFUG00015011140)	ENSNFUG00015011132	DNER (ENSNFUG00015011016)	TRIP12 (ENSNFUG00015010115)	ENSNFUG00015010001	CABZ01024201.1 (ENSNFUG00015008979) #21	RNF7 (ENSNFUG00015008842) #22	grk7b (ENSNFUG00015008819) #23	ENSNFUG00015008814	FZD9B (ENSNFUG00015008810)	baz1b (ENSNFUG00015008776)	BCL7B (ENSNFUG00015008756)	ENSNFUG00015008753	HIP1 (ENSNFUG00015008481)	YPEL2 (ENSNFUG00015008392)	GDPD1 (ENSNFUG00015008383)	tmem120ab (ENSNFUG00015008247)	POR (ENSNFUG00015008134)	taf15 (ENSNFUG00015008075)	CU633910.1 (ENSNFUG00015008054)	FAM124B (ENSNFUG00015008044)	CUL3 (ENSNFUG00015004293)
Mangrove rivulus	MODERN SPECIES	75	ENSKMAG00000003332	megf6 (ENSKMAG00000003245)	mffa (ENSKMAG00000003189)	ENSKMAG00000003170	mrpl44 (ENSKMAG00000003162)	agfg1a (ENSKMAG00000003111)	SLC19A3 (ENSKMAG00000003092)	slc19a3b (ENSKMAG00000003084)	ENSKMAG00000003048	sphkap (ENSKMAG00000003011)	pid1 (ENSKMAG00000002986)	dner (ENSKMAG00000002947)	trip12 (ENSKMAG00000002770)	ZBTB38 (ENSKMAG00000002737) #20	RASA2 (ENSKMAG00000002652) #21	rnf7 (ENSKMAG00000002627) #22	grk7b (ENSKMAG00000002552) #23	fzd9b (ENSKMAG00000002535)	baz1b (ENSKMAG00000002410)	bcl7bb (ENSKMAG00000002360)	hip1 (ENSKMAG00000002247)	ENSKMAG00000002210	gdpd1 (ENSKMAG00000002144)	TMEM120A (ENSKMAG00000002081)	porb (ENSKMAG00000001985)	taf15 (ENSKMAG00000001916)	MMP28 (ENSKMAG00000001896)	ENSKMAG00000001887	cul3b (ENSKMAG00000001794)	PDE2A (ENSKMAG00000001714)	ARAP1 (ENSKMAG00000001659)
Ovalentaria_B	ANCESTRAL SPECIES	11	ENSGT00390000009776.o	ENSGT00940000158494	ENSGT00390000016956	ENSGT00940000155511.n.a	ENSGT00950000183022.a.a.a	ENSGT00950000183022.a.a.b.a	ENSGT00940000162537	ENSGT00940000153313.A	ENSGT00510000048154	ENSGT00940000158872	ENSGT00940000156517	ENSGT00390000001015.d	ENSGT00940000161449 #20	ENSGT00940000158201 #21	ENSGT00940000160889	ENSGT00940000155481.d #22	ENSGT00940000160511.b #23	ENSGT00940000161226.a	ENSGT00940000156831	ENSGT00390000002172.A.a.f	ENSGT00940000153594.d	ENSGT00940000164942.b	ENSGT00940000156673	ENSGT00390000007848.a.c	ENSGT00940000156847.a	ENSGT00940000166275	ENSGT00940000159596	ENSGT00590000083134.a.b	ENSGT00940000155066.e.a	ENSGT00940000159817	ENSGT00940000174692.a
Pomacentridae	ANCESTRAL SPECIES	5	ENSGT00940000158494	ENSGT00390000016956	ENSGT00940000155511.n.a	ENSGT00950000183022.a.a.a	ENSGT00950000183022.a.a.b.a	ENSGT00940000166116	ENSGT00940000162537	ENSGT00940000153313.A	ENSGT00510000048154	ENSGT00940000158872	ENSGT00940000156517	ENSGT00390000001015.d	ENSGT00940000161449 #20	ENSGT00940000158201 #21	ENSGT00940000160889	ENSGT00940000155481.d #22	ENSGT00940000160511.b #23	ENSGT00940000161226.a	ENSGT00940000156831	ENSGT00390000002172.A.a.f	ENSGT00940000153594.d	ENSGT00940000164942.b	ENSGT00940000156673	ENSGT00390000007848.a.c	ENSGT00940000156847.a	ENSGT00940000166275	ENSGT00940000159596	ENSGT00590000083134.a.b	ENSGT00940000155066.e.a	ENSGT00940000159817	ENSGT00940000157424
Pomacentridae_A	ANCESTRAL SPECIES	4	ENSGT00390000009776.o	ENSGT00940000158494	ENSGT00390000016956	ENSGT00940000155511.n.a	ENSGT00950000183022.a.a.a	ENSGT00950000183022.a.a.b.a	ENSGT00940000162537	ENSGT00940000153313.A	ENSGT00510000048154	ENSGT00940000158872	ENSGT00940000156517	ENSGT00390000001015.d	ENSGT00940000161449 #20	ENSGT00940000158201 #21	ENSGT00940000160889	ENSGT00940000155481.d #22	ENSGT00940000160511.b #23	ENSGT00940000161226.a	ENSGT00940000156831	ENSGT00390000002172.A.a.f	ENSGT00940000153594.d	ENSGT00940000164942.b	ENSGT00940000159010.a	ENSGT00940000156673	ENSGT00390000007848.a.c	ENSGT00940000156847.a	ENSGT00940000166275	ENSGT00940000159596	ENSGT00590000083134.a.b	ENSGT00940000155066.e.a	ENSGT00940000159817
Amphiprion	ANCESTRAL SPECIES	6	ENSGT00390000009776.o	ENSGT00940000158494	ENSGT00390000016956	ENSGT00940000155511.n.a	ENSGT00950000183022.a.a.a	ENSGT00950000183022.a.a.b.a	ENSGT00940000162537	ENSGT00940000153313.A	ENSGT00510000048154	ENSGT00940000158872	ENSGT00940000156517	ENSGT00390000001015.d	ENSGT00940000161449 #20	ENSGT00940000158201 #21	ENSGT00940000160889	ENSGT00940000155481.d #22	ENSGT00940000160511.b #23	ENSGT00940000161226.a	ENSGT00940000156831	ENSGT00390000002172.A.a.f	ENSGT00940000153594.d	ENSGT00940000164942.b	ENSGT00940000159010.a	ENSGT00940000156673	ENSGT00390000007848.a.c	ENSGT00940000156847.a	ENSGT00940000166275	ENSGT00940000159596	ENSGT00590000083134.a.b	ENSGT00940000155066.e.a	ENSGT00940000159817
Orange clownfish	MODERN SPECIES	23	ENSAPEG00000019220	mrpl44 (ENSAPEG00000019210)	agfg1a (ENSAPEG00000019154)	SLC19A3 (ENSAPEG00000019109)	slc19a3b (ENSAPEG00000019072)	daw1 (ENSAPEG00000019015)	sphkap (ENSAPEG00000018947)	ENSAPEG00000018861	pid1 (ENSAPEG00000018849)	dner (ENSAPEG00000018829)	trip12 (ENSAPEG00000018695)	fbxo36a (ENSAPEG00000018643)	ENSAPEG00000018628	RASA2 (ENSAPEG00000018523) #21	ENSAPEG00000018487	rnf7 (ENSAPEG00000018472) #22	grk7b (ENSAPEG00000018410) #23	fzd9b (ENSAPEG00000018370)	baz1b (ENSAPEG00000018276)	bcl7bb (ENSAPEG00000018260)	hip1 (ENSAPEG00000018220)	ENSAPEG00000018190	gdpd1 (ENSAPEG00000018150)	tmem120ab (ENSAPEG00000018101)	porb (ENSAPEG00000018066)	taf15 (ENSAPEG00000018037)	MMP28 (ENSAPEG00000017982)	ENSAPEG00000017974	cul3b (ENSAPEG00000017938)	PDE2A (ENSAPEG00000017810)	ARAP1 (ENSAPEG00000017627)
Clown anemonefish	MODERN SPECIES	2821															ENSAOCG00000018732	rnf7 (ENSAOCG00000018702) #22	GRK7 (ENSAOCG00000018680) #23
Spiny chromis	MODERN SPECIES	135	ENSAPOG00000021548	mrpl44 (ENSAPOG00000021536)	agfg1a (ENSAPOG00000021514)	slc19a3b (ENSAPOG00000021479)	SLC19A3 (ENSAPOG00000021432)	daw1 (ENSAPOG00000021410)	sphkap (ENSAPOG00000021287)	pid1 (ENSAPOG00000021242)	dner (ENSAPOG00000021227)	trip12 (ENSAPOG00000021174)	fbxo36a (ENSAPOG00000021021)	ZBTB38 (ENSAPOG00000020986) #20	RASA2 (ENSAPOG00000020970) #21	mibp2 (ENSAPOG00000020849)	ENSAPOG00000020838	rnf7 (ENSAPOG00000020831) #22	ENSAPOG00000020822 #23
Bicolor damselfish	MODERN SPECIES	515								pid1 (ENSSPAG00000011488)	dner (ENSSPAG00000011454)	trip12 (ENSSPAG00000011366)	fbxo36a (ENSSPAG00000011285)	ZBTB38 (ENSSPAG00000011259) #20	RASA2 (ENSSPAG00000011139) #21	ENSSPAG00000011119	ENSSPAG00000011092	rnf7 (ENSSPAG00000011081) #22	grk7b (ENSSPAG00000011073) #23	fzd9b (ENSSPAG00000011041)	baz1b (ENSSPAG00000010956)	bcl7bb (ENSSPAG00000010933)	hip1 (ENSSPAG00000010778)	ENSSPAG00000010750	gdpd1 (ENSSPAG00000010709)	tmem120ab (ENSSPAG00000010676)	porb (ENSSPAG00000010600)	ENSSPAG00000010572	ENSSPAG00000010557	ENSSPAG00000010542
Cichlidae	ANCESTRAL SPECIES	25	ENSGT00390000009776.o	ENSGT00940000158494	ENSGT00390000016956	ENSGT00940000155511.n.a	ENSGT00950000183022.a.a.a	ENSGT00950000183022.a.a.b.a	ENSGT00940000162537	ENSGT00940000153313.A	ENSGT00510000048154	ENSGT00940000158872	ENSGT00940000156517	ENSGT00390000001015.d	ENSGT00940000161449 #20	ENSGT00940000158201 #21	ENSGT00940000160889	ENSGT00940000155481.d #22	ENSGT00940000160511.b #23	ENSGT00940000161226.a	ENSGT00940000156831	ENSGT00390000002172.A.a.f	ENSGT00940000153594.d	ENSGT00940000164942.b	ENSGT00940000156673	ENSGT00390000007848.a.c	ENSGT00940000156847.a	ENSGT00940000166275	ENSGT00940000159596	ENSGT00590000083134.a.b	ENSGT00940000155066.e.a	ENSGT00940000159817	ENSGT00940000174692.a
Pseudocrenilabrinae	ANCESTRAL SPECIES	22	ENSGT00390000009776.o	ENSGT00940000158494	ENSGT00390000016956	ENSGT00940000155511.n.a	ENSGT00950000183022.a.a.a	ENSGT00950000183022.a.a.b.a	ENSGT00940000162537	ENSGT00940000153313.A	ENSGT00510000048154	ENSGT00940000158872	ENSGT00940000156517	ENSGT00390000001015.d	ENSGT00940000161449 #20	ENSGT00940000158201 #21	ENSGT00940000160889	ENSGT00940000155481.d #22	ENSGT00940000160511.b #23	ENSGT00940000161226.a	ENSGT00940000156831	ENSGT00390000002172.A.a.f	ENSGT00940000153594.d	ENSGT00940000164942.b	ENSGT00940000156673	ENSGT00390000007848.a.c	ENSGT00940000156847.a	ENSGT00940000166275	ENSGT00940000159596	ENSGT00590000083134.a.b	ENSGT00940000155066.e.a	ENSGT00940000159817	ENSGT00940000157424
Pseudocrenilabrinae_A	ANCESTRAL SPECIES	25	ENSGT00940000158494	ENSGT00390000016956	ENSGT00940000155511.n.a	ENSGT00950000183022.a.a.a.e	ENSGT00950000183022.a.a.a.f	ENSGT00950000183022.a.a.b.a	ENSGT00940000162537	ENSGT00940000153313.A	ENSGT00510000048154	ENSGT00940000158872	ENSGT00940000156517	ENSGT00390000001015.d	ENSGT00940000161449 #20	ENSGT00940000158201 #21	ENSGT00940000160889	ENSGT00940000155481.d #22	ENSGT00940000160511.b #23	ENSGT00940000161226.a	ENSGT00940000156831	ENSGT00390000002172.A.a.f	ENSGT00940000153594.d	ENSGT00940000164942.b	ENSGT00940000156673	ENSGT00390000007848.a.c	ENSGT00940000156847.a	ENSGT00940000166275	ENSGT00940000159596	ENSGT00590000083134.a.b	ENSGT00940000155066.e.a	ENSGT00940000159817	ENSGT00940000157424
Haplochromini	ANCESTRAL SPECIES	33	ENSGT00390000016956	ENSGT00940000155511.n.a	ENSGT00950000183022.a.a.a.e	ENSGT00950000183022.a.a.a.f	ENSGT00950000183022.a.a.b.a	ENSGT00940000167030	ENSGT00940000162537	ENSGT00940000153313.A	ENSGT00510000048154	ENSGT00940000158872	ENSGT00940000156517	ENSGT00390000001015.d	ENSGT00940000161449 #20	ENSGT00940000158201 #21	ENSGT00940000160889	ENSGT00940000155481.d #22	ENSGT00940000160511.b #23	ENSGT00940000161226.a	ENSGT00940000156831	ENSGT00390000002172.A.a.f	ENSGT00940000153594.d	ENSGT00940000164942.b	ENSGT00940000156673	ENSGT00390000007848.a.c	ENSGT00940000156847.a	ENSGT00940000166275	ENSGT00940000159596	ENSGT00590000083134.a.b	ENSGT00940000155066.e.a	ENSGT00940000159817	ENSGT00940000157424
Burton s mouthbrooder	MODERN SPECIES	422						vrk1 (ENSHBUG00000013956)	daw1 (ENSHBUG00000013999)	sphkap (ENSHBUG00000014078)	pid1 (ENSHBUG00000014096)	dner (ENSHBUG00000014107)	trip12 (ENSHBUG00000014229)	fbxo36a (ENSHBUG00000014335)	ZBTB38 (ENSHBUG00000014353) #20	RASA2 (ENSHBUG00000014428) #21	ENSHBUG00000014450	rnf7 (ENSHBUG00000014465) #22	grk7b (ENSHBUG00000014617) #23	fzd9b (ENSHBUG00000014628)	baz1b (ENSHBUG00000014761)	bcl7bb (ENSHBUG00000000431)	ENSHBUG00000014783	ENSHBUG00000014797	hip1 (ENSHBUG00000014884)	ENSHBUG00000014891	gdpd1 (ENSHBUG00000014971)	tmem120ab (ENSHBUG00000015031)	porb (ENSHBUG00000015158)	taf15 (ENSHBUG00000015178)	MMP28 (ENSHBUG00000015182)	ENSHBUG00000015193	cul3b (ENSHBUG00000015248)
Haplochromini_A	ANCESTRAL SPECIES	20	ENSGT00390000016956	ENSGT00940000155511.n.a	ENSGT00950000183022.a.a.a.e	ENSGT00950000183022.a.a.a.f	ENSGT00950000183022.a.a.b.a	ENSGT00940000167030	ENSGT00940000162537	ENSGT00940000153313.A	ENSGT00510000048154	ENSGT00940000158872	ENSGT00940000156517	ENSGT00390000001015.d	ENSGT00940000161449 #20	ENSGT00940000158201 #21	ENSGT00940000160889	ENSGT00940000155481.d #22	ENSGT00940000160511.b #23	ENSGT00940000161226.a	ENSGT00940000156831	ENSGT00390000002172.A.a.f	ENSGT00940000153594.d	ENSGT00940000164942.b	ENSGT00940000156673	ENSGT00390000007848.a.c	ENSGT00940000156847.a	ENSGT00940000166275	ENSGT00940000159596	ENSGT00590000083134.a.b	ENSGT00940000155066.e.a	ENSGT00940000159817	ENSGT00940000157424
Haplochromini_B	ANCESTRAL SPECIES	9	ENSGT00390000016956	ENSGT00940000155511.n.a	ENSGT00950000183022.a.a.a.e	ENSGT00950000183022.a.a.a.f	ENSGT00950000183022.a.a.b.a	ENSGT00940000162537	ENSGT00940000153313.A	ENSGT00510000048154	ENSGT00940000158872	ENSGT00940000156517	ENSGT00390000001015.d	ENSGT00940000161449 #20	ENSGT00940000158201 #21	ENSGT00940000160889	ENSGT00940000155481.c.a #22	ENSGT00940000155481.d #22	ENSGT00940000160511.b #23	ENSGT00940000161226.a	ENSGT00940000156831	ENSGT00390000002172.A.a.f	ENSGT00940000153594.d	ENSGT00940000164942.b	ENSGT00940000156673	ENSGT00390000007848.a.c	ENSGT00940000156847.a	ENSGT00940000166275	ENSGT00940000159596	ENSGT00590000083134.a.b	ENSGT00940000155066.e.a	ENSGT00940000159817	ENSGT00510000047611
Eastern happy	MODERN SPECIES	5	mrpl44 (ENSACLG00000005317)	agfg1a (ENSACLG00000005347)	SLC19A3 (ENSACLG00000005552)	SLC19A3 (ENSACLG00000005772)	slc19a3b (ENSACLG00000005840)	daw1 (ENSACLG00000005858)	sphkap (ENSACLG00000006219)	pid1 (ENSACLG00000006412)	dner (ENSACLG00000006423)	trip12 (ENSACLG00000006446)	fbxo36a (ENSACLG00000006635)	ZBTB38 (ENSACLG00000006641) #20	RASA2 (ENSACLG00000006649) #21	ENSACLG00000006674	ENSACLG00000006698	rnf7 (ENSACLG00000007041) #22	grk7b (ENSACLG00000007053) #23	fzd9b (ENSACLG00000007060)	baz1b (ENSACLG00000007063)	bcl7bb (ENSACLG00000007081)	hip1 (ENSACLG00000007088)	ENSACLG00000007132	gdpd1 (ENSACLG00000007141)	tmem120ab (ENSACLG00000007161)	porb (ENSACLG00000007192)	taf15 (ENSACLG00000007228)	MMP28 (ENSACLG00000007234)	ENSACLG00000007259	cul3b (ENSACLG00000007270)	PDE2A (ENSACLG00000007327)	ENSACLG00000007386
P. nyererei	MODERN SPECIES	480							daw1 (ENSPNYG00000011725)	sphkap (ENSPNYG00000011787)	pid1 (ENSPNYG00000011862)	dner (ENSPNYG00000011892)	trip12 (ENSPNYG00000012003)	fbxo36a (ENSPNYG00000012149)	ZBTB38 (ENSPNYG00000012227) #20	RASA2 (ENSPNYG00000012261) #21	ENSPNYG00000012342	rnf7 (ENSPNYG00000012363) #22	grk7b (ENSPNYG00000012400) #23	fzd9b (ENSPNYG00000012474)	baz1b (ENSPNYG00000012497)	bcl7bb (ENSPNYG00000012554)	hip1 (ENSPNYG00000012591)	ENSPNYG00000012669	ENSPNYG00000012694	gdpd1 (ENSPNYG00000012760)	tmem120ab (ENSPNYG00000012787)	porb (ENSPNYG00000012823)	taf15 (ENSPNYG00000012865)	MMP28 (ENSPNYG00000012888)	ENSPNYG00000012914	cul3b (ENSPNYG00000012946)	ENSPNYG00000012999
Lyretail cichlid	MODERN SPECIES	357	ENSNBRG00000002925	mffa (ENSNBRG00000002975)	dnaaf1 (ENSNBRG00000003013)	mrpl44 (ENSNBRG00000003041)	agfg1a (ENSNBRG00000003048)	SLC19A3 (ENSNBRG00000003069)	slc19a3b (ENSNBRG00000003172)	daw1 (ENSNBRG00000003214)	sphkap (ENSNBRG00000003261)	pid1 (ENSNBRG00000003291)	ENSNBRG00000003303	fbxo36a (ENSNBRG00000003348)	ZBTB38 (ENSNBRG00000003463) #20	RASA2 (ENSNBRG00000003480) #21	ENSNBRG00000003559	rnf7 (ENSNBRG00000003578) #22	grk7b (ENSNBRG00000003603) #23	fzd9b (ENSNBRG00000003679)	baz1b (ENSNBRG00000003716)	bcl7bb (ENSNBRG00000003794)	hip1 (ENSNBRG00000003839)	ENSNBRG00000003931	gdpd1 (ENSNBRG00000004031)	tmem120ab (ENSNBRG00000004068)	porb (ENSNBRG00000004129)	taf15 (ENSNBRG00000004162)	MMP28 (ENSNBRG00000004177)	ENSNBRG00000004216	ENSNBRG00000004238	ENSNBRG00000004257	ENSNBRG00000004280
Nile tilapia	MODERN SPECIES	5	mffa (ENSONIG00000005604)	ENSONIG00000005606	mrpl44 (ENSONIG00000005607)	agfg1a (ENSONIG00000005608)	SLC19A3 (ENSONIG00000005612)	slc19a3b (ENSONIG00000039314)	ENSONIG00000005618	sphkap (ENSONIG00000005630)	pid1 (ENSONIG00000005632)	dner (ENSONIG00000005634)	trip12 (ENSONIG00000005637)	fbxo36a (ENSONIG00000028652)	ENSONIG00000028777 #20	RASA2 (ENSONIG00000005656) #21	ENSONIG00000005675	rnf7 (ENSONIG00000005677) #22	grk7b (ENSONIG00000005679) #23	baz1b (ENSONIG00000005682)	bcl7bb (ENSONIG00000005689)	hip1 (ENSONIG00000005691)	ENSONIG00000042185	gdpd1 (ENSONIG00000016698)	tmem120ab (ENSONIG00000016701)	porb (ENSONIG00000016702)	taf15 (ENSONIG00000016704)	mmp28 (ENSONIG00000027558)	FAM124B (ENSONIG00000040230)	cul3b (ENSONIG00000016708)	ENSONIG00000041571	ENSONIG00000043005	PDE2A (ENSONIG00000016713)
Midas cichlid	MODERN SPECIES	1824	agfg1a (ENSACIG00000011555)	SLC19A3 (ENSACIG00000011600)	slc19a3b (ENSACIG00000011721)	daw1 (ENSACIG00000011748)	sphkap (ENSACIG00000011780)	pid1 (ENSACIG00000011846)	dner (ENSACIG00000011855)	trip12 (ENSACIG00000011919)	ENSACIG00000012005	ENSACIG00000012059 #20	RASA2 (ENSACIG00000012064) #21	ENSACIG00000012136	ENSACIG00000012159	ENSACIG00000012169	ENSACIG00000012204	rnf7 (ENSACIG00000012221) #22	GRK7 (ENSACIG00000012233) #23	ENSACIG00000012247	ccdc96 (ENSACIG00000012259)	tada2b (ENSACIG00000012268)	grpel1 (ENSACIG00000012282)	SORCS2 (ENSACIG00000012327)	AFAP1 (ENSACIG00000012422)	ABLIM2 (ENSACIG00000012527)	zcchc4 (ENSACIG00000012574)	pde5ab (ENSACIG00000012649)	mad2l1 (ENSACIG00000012709)	ENSACIG00000012719
Percomorphaceae_C	ANCESTRAL SPECIES	9	ENSGT00390000009776.o	ENSGT00940000158494	ENSGT00390000016956	ENSGT00940000155511.n.a	ENSGT00950000183022.a.a.a	ENSGT00950000183022.a.a.b.a	ENSGT00940000162537	ENSGT00940000153313.A	ENSGT00510000048154	ENSGT00940000158872	ENSGT00940000156517	ENSGT00390000001015.d	ENSGT00940000161449 #20	ENSGT00940000158201 #21	ENSGT00940000160889	ENSGT00940000155481.d #22	ENSGT00940000160511.b #23	ENSGT00940000161226.a	ENSGT00940000156831	ENSGT00390000002172.A.a.f	ENSGT00940000153594.d	ENSGT00940000164942.b	ENSGT00940000156673	ENSGT00390000007848.a.c	ENSGT00940000156847.a	ENSGT00940000166275	ENSGT00940000159596	ENSGT00590000083134.a.b	ENSGT00940000155066.e.a	ENSGT00940000159817	ENSGT00940000157424
Eupercaria	ANCESTRAL SPECIES	7	ENSGT00390000009776.o	ENSGT00940000158494	ENSGT00390000016956	ENSGT00940000155511.n.a	ENSGT00950000183022.a.a.a	ENSGT00950000183022.a.a.b.a	ENSGT00940000162537	ENSGT00940000153313.A	ENSGT00510000048154	ENSGT00940000158872	ENSGT00940000156517	ENSGT00390000001015.d	ENSGT00940000161449 #20	ENSGT00940000158201 #21	ENSGT00940000160889	ENSGT00940000155481.d #22	ENSGT00940000160511.b #23	ENSGT00940000161226.a	ENSGT00940000156831	ENSGT00390000002172.A.a.f	ENSGT00940000153594.d	ENSGT00940000164942.b	ENSGT00940000156673	ENSGT00390000007848.a.c	ENSGT00940000156847.a	ENSGT00940000166275	ENSGT00940000159596	ENSGT00590000083134.a.b	ENSGT00940000155066.e.a	ENSGT00940000159817	ENSGT00940000157424
Tetraodontidae	ANCESTRAL SPECIES	128										ENSGT00940000158494	ENSGT00390000016956	ENSGT00950000183022.a.a.a	ENSGT00510000048154	ENSGT00940000158872	ENSGT00940000156517	ENSGT00940000155481.d #22	ENSGT00940000160511.b #23	ENSGT00940000161226.a	ENSGT00940000156831	ENSGT00390000002172.A.a.f	ENSGT00940000153594.d	ENSGT00940000164942.b
Fugu	MODERN SPECIES	2	ENSTRUG00000026088	ENSTRUG00000010591	ENSTRUG00000028139	arcn1b (ENSTRUG00000010422)	hmbsa (ENSTRUG00000010118)	cul3a (ENSTRUG00000009859)	ARAP1 (ENSTRUG00000008634)	stard10 (ENSTRUG00000008506)	MECOM (ENSTRUG00000007998)	mrpl44 (ENSTRUG00000007892)	ENSTRUG00000026901	SLC19A3 (ENSTRUG00000007628)	pid1 (ENSTRUG00000030119)	dner (ENSTRUG00000007431)	trip12 (ENSTRUG00000006584)	rnf7 (ENSTRUG00000006552) #22	grk7b (ENSTRUG00000006176) #23	fzd9b (ENSTRUG00000026125)	baz1b (ENSTRUG00000005817)	bcl7bb (ENSTRUG00000022681)	hip1 (ENSTRUG00000005542)	ENSTRUG00000026034	pak1 (ENSTRUG00000004976)	ENSTRUG00000004581	ENSTRUG00000023776	NLRX1 (ENSTRUG00000002187)	efhd1 (ENSTRUG00000030460)	kcnj13 (ENSTRUG00000001814)	NGEF (ENSTRUG00000001518)	TAAR1 (ENSTRUG00000025464)	GAL3ST2 (ENSTRUG00000003461)
Tetraodon	MODERN SPECIES	26	ENSTNIG00000002935	ENSTNIG00000004521	iqgap3 (ENSTNIG00000006098)	decr1 (ENSTNIG00000006096)	pmvk (ENSTNIG00000006095)	ENSTNIG00000006094	ARHGEF2 (ENSTNIG00000006093)	ENSTNIG00000006092	ENSTNIG00000006091	ENSTNIG00000006090	ENSTNIG00000002643	ENSTNIG00000000797	sall1a (ENSTNIG00000004257)	ENSTNIG00000004256	ENSTNIG00000004815	rnf7 (ENSTNIG00000005982) #22	grk7b (ENSTNIG00000019847) #23	baz1b (ENSTNIG00000014185)	bcl7bb (ENSTNIG00000000582)	hip1 (ENSTNIG00000014184)	ENSTNIG00000014183	pak1 (ENSTNIG00000003751)	NLRX1 (ENSTNIG00000006412)	efhd1 (ENSTNIG00000006411)	kcnj13 (ENSTNIG00000006410)	ENSTNIG00000018619	zgc:109889 (ENSTNIG00000018620)	htr2cl1 (ENSTNIG00000018621)	ENSTNIG00000018622	ccnb3 (ENSTNIG00000018623)	tnfsf10l3 (ENSTNIG00000005788)
Eupecaria_A	ANCESTRAL SPECIES	9	ENSGT00390000009776.o	ENSGT00940000158494	ENSGT00390000016956	ENSGT00940000155511.n.a	ENSGT00950000183022.a.a.a	ENSGT00950000183022.a.a.b.a	ENSGT00940000162537	ENSGT00940000153313.A	ENSGT00510000048154	ENSGT00940000158872	ENSGT00940000156517	ENSGT00390000001015.d	ENSGT00940000161449 #20	ENSGT00940000158201 #21	ENSGT00940000160889	ENSGT00940000155481.d #22	ENSGT00940000160511.b #23	ENSGT00940000161226.a	ENSGT00940000156831	ENSGT00390000002172.A.a.f	ENSGT00940000153594.d	ENSGT00940000164942.b	ENSGT00940000156673	ENSGT00390000007848.a.c	ENSGT00940000156847.a	ENSGT00940000166275	ENSGT00940000159596	ENSGT00590000083134.a.b	ENSGT00940000155066.e.a	ENSGT00940000159817	ENSGT00940000157424
Ballan wrasse	MODERN SPECIES	170	mffa (ENSLBEG00000026465)	ENSLBEG00000026487	mrpl44 (ENSLBEG00000026498)	agfg1a (ENSLBEG00000026528)	SLC19A3 (ENSLBEG00000026582)	slc19a3b (ENSLBEG00000026638)	daw1 (ENSLBEG00000026660)	sphkap (ENSLBEG00000026715)	pid1 (ENSLBEG00000026778)	dner (ENSLBEG00000026797)	trip12 (ENSLBEG00000026851)	fbxo36a (ENSLBEG00000026929)	ENSLBEG00000026935	RASA2 (ENSLBEG00000026971) #21	ENSLBEG00000027057	rnf7 (ENSLBEG00000027075) #22	grk7b (ENSLBEG00000027104) #23	fzd9b (ENSLBEG00000027151)	baz1b (ENSLBEG00000027180)	bcl7bb (ENSLBEG00000027224)	hip1 (ENSLBEG00000027307)	ENSLBEG00000027458	gdpd1 (ENSLBEG00000027477)	tmem120ab (ENSLBEG00000027495)	porb (ENSLBEG00000027532)	ENSLBEG00000027571	MMP28 (ENSLBEG00000027595)	ENSLBEG00000027616	cul3b (ENSLBEG00000027634)	ENSLBEG00000027657	ENSLBEG00000027665
Eupecaria_B	ANCESTRAL SPECIES	9	ENSGT00390000009776.o	ENSGT00940000158494	ENSGT00390000016956	ENSGT00940000155511.n.a	ENSGT00950000183022.a.a.a	ENSGT00950000183022.a.a.b.a	ENSGT00940000162537	ENSGT00940000153313.A	ENSGT00510000048154	ENSGT00940000158872	ENSGT00940000156517	ENSGT00390000001015.d	ENSGT00940000161449 #20	ENSGT00940000158201 #21	ENSGT00940000160889	ENSGT00940000155481.d #22	ENSGT00940000160511.b #23	ENSGT00940000161226.a	ENSGT00940000156831	ENSGT00390000002172.A.a.f	ENSGT00940000153594.d	ENSGT00940000164942.b	ENSGT00940000156673	ENSGT00390000007848.a.c	ENSGT00940000156847.a	ENSGT00940000166275	ENSGT00940000159596	ENSGT00590000083134.a.b	ENSGT00940000155066.e.a	ENSGT00940000159817	ENSGT00940000157424
Perciformes	ANCESTRAL SPECIES	10	ENSGT00390000009776.o	ENSGT00940000158494	ENSGT00390000016956	ENSGT00940000155511.n.a	ENSGT00950000183022.a.a.a	ENSGT00950000183022.a.a.b.a	ENSGT00940000162537	ENSGT00940000153313.A	ENSGT00510000048154	ENSGT00940000158872	ENSGT00940000156517	ENSGT00390000001015.d	ENSGT00940000161449 #20	ENSGT00940000158201 #21	ENSGT00940000160889	ENSGT00940000155481.d #22	ENSGT00940000160511.b #23	ENSGT00940000161226.a	ENSGT00940000156831	ENSGT00390000002172.A.a.f	ENSGT00940000153594.d	ENSGT00940000164942.b	ENSGT00940000156673	ENSGT00390000007848.a.c	ENSGT00940000156847.a	ENSGT00940000166275	ENSGT00940000159596	ENSGT00590000083134.a.b	ENSGT00940000155066.e.a	ENSGT00940000159817	ENSGT00940000157424
Perciformes_a	ANCESTRAL SPECIES	9	ENSGT00390000009776.o	ENSGT00940000158494	ENSGT00390000016956	ENSGT00940000155511.n.a	ENSGT00950000183022.a.a.a	ENSGT00950000183022.a.a.b.a	ENSGT00940000162537	ENSGT00940000153313.A	ENSGT00510000048154	ENSGT00940000158872	ENSGT00940000156517	ENSGT00390000001015.d	ENSGT00940000161449 #20	ENSGT00940000158201 #21	ENSGT00940000160889	ENSGT00940000155481.d #22	ENSGT00940000160511.b #23	ENSGT00940000161226.a	ENSGT00940000156831	ENSGT00390000002172.A.a.f	ENSGT00940000153594.d	ENSGT00940000164942.b	ENSGT00940000156673	ENSGT00390000007848.a.c	ENSGT00940000156847.a	ENSGT00940000166275	ENSGT00940000159596	ENSGT00590000083134.a.b	ENSGT00940000155066.e.a	ENSGT00940000157424	ENSGT00510000047611
Pike perch	MODERN SPECIES	97	mffa (ENSSLUG00000022240)	ENSSLUG00000022239	mrpl44 (ENSSLUG00000022237)	agfg1a (ENSSLUG00000022224)	SLC19A3 (ENSSLUG00000022214)	slc19a3b (ENSSLUG00000022029)	daw1 (ENSSLUG00000022001)	sphkap (ENSSLUG00000021994)	pid1 (ENSSLUG00000021989)	dner (ENSSLUG00000021976)	trip12 (ENSSLUG00000016910)	fbxo36a (ENSSLUG00000016648)	ENSSLUG00000016644	RASA2 (ENSSLUG00000016415) #21	ENSSLUG00000016395	rnf7 (ENSSLUG00000016389) #22	grk7b (ENSSLUG00000016298) #23	fzd9b (ENSSLUG00000016270)	baz1b (ENSSLUG00000016192)	bcl7bb (ENSSLUG00000016182)	ENSSLUG00000016180	gdpd1 (ENSSLUG00000016160)	tmem120ab (ENSSLUG00000016132)	porb (ENSSLUG00000015322)	ENSSLUG00000015236	MMP28 (ENSSLUG00000015222)	ENSSLUG00000015217	cul3b (ENSSLUG00000014796)	ARAP1 (ENSSLUG00000011180)	stard10 (ENSSLUG00000011087)	CLPB (ENSSLUG00000009163)
Channel bull blenny	MODERN SPECIES	4	ENSCGOG00000009850	bace1 (ENSCGOG00000009854)	pcsk7 (ENSCGOG00000009933)	tagln (ENSCGOG00000010430)	ENSCGOG00000010441	cbln20 (ENSCGOG00000010443)	cbln20 (ENSCGOG00000010445)	ENSCGOG00000010446	MFRP (ENSCGOG00000010451)	ENSCGOG00000010457	pnkp (ENSCGOG00000010493)	zgc:162193 (ENSCGOG00000010684)	ENSCGOG00000010689	dpf1 (ENSCGOG00000010694)	ENSCGOG00000010741	rnf7 (ENSCGOG00000010744) #22	grk7b (ENSCGOG00000010756) #23	fzd9b (ENSCGOG00000010962)	baz1b (ENSCGOG00000010966)	bcl7bb (ENSCGOG00000011004)	hip1 (ENSCGOG00000011017)	ENSCGOG00000011498	gdpd1 (ENSCGOG00000011502)	tmem120ab (ENSCGOG00000011529)	porb (ENSCGOG00000011551)	taf15 (ENSCGOG00000011786)	MMP28 (ENSCGOG00000011793)	ENSCGOG00000011794	cul3b (ENSCGOG00000011813)	ARAP1 (ENSCGOG00000012540)	stard10 (ENSCGOG00000013983)
Cottioidei	ANCESTRAL SPECIES	4	ENSGT00940000159256.o	ENSGT00390000009776.o	ENSGT00940000158494	ENSGT00390000016956	ENSGT00940000155511.n.a	ENSGT00950000183022.a.a.a	ENSGT00950000183022.a.a.b.a	ENSGT00940000162537	ENSGT00940000153313.A	ENSGT00510000048154	ENSGT00940000158872	ENSGT00940000156517	ENSGT00940000161449 #20	ENSGT00940000158201 #21	ENSGT00940000160889	ENSGT00940000155481.d #22	ENSGT00940000160511.b #23	ENSGT00940000161226.a	ENSGT00940000156831	ENSGT00390000002172.A.a.f	ENSGT00940000153594.d	ENSGT00940000164942.b	ENSGT00940000156673	ENSGT00390000007848.a.c	ENSGT00940000156847.a	ENSGT00940000166275	ENSGT00940000159596	ENSGT00590000083134.a.b	ENSGT00940000155066.e.a	ENSGT00940000159817	ENSGT00940000157424
Stickleback	MODERN SPECIES		ENSGACG00000007320	mffa (ENSGACG00000007332)	ENSGACG00000007361	mrpl44 (ENSGACG00000007362)	agfg1a (ENSGACG00000007374)	SLC19A3 (ENSGACG00000007388)	ENSGACG00000007395	sphkap (ENSGACG00000007428)	pid1 (ENSGACG00000007440)	dner (ENSGACG00000007444)	trip12 (ENSGACG00000007464)	ENSGACG00000007512	ZBTB38 (ENSGACG00000007517) #20	RASA2 (ENSGACG00000007520) #21	ENSGACG00000007587	rnf7 (ENSGACG00000007590) #22	grk7b (ENSGACG00000007598) #23	fzd9b (ENSGACG00000007608)	baz1b (ENSGACG00000007613)	bcl7bb (ENSGACG00000007630)	hip1 (ENSGACG00000007649)	ENSGACG00000007670	gdpd1 (ENSGACG00000007672)	tmem120ab (ENSGACG00000007693)	porb (ENSGACG00000007695)	MMP28 (ENSGACG00000007700)	FAM124B (ENSGACG00000007708)	cul3b (ENSGACG00000007710)	PDE2A (ENSGACG00000007721)	ARAP1 (ENSGACG00000007728)	stard10 (ENSGACG00000007754)
Eupecaria_C	ANCESTRAL SPECIES	7	ENSGT00390000009776.o	ENSGT00940000158494	ENSGT00390000016956	ENSGT00940000155511.n.a	ENSGT00950000183022.a.a.a	ENSGT00950000183022.a.a.b.a	ENSGT00940000162537	ENSGT00940000153313.A	ENSGT00510000048154	ENSGT00940000158872	ENSGT00940000156517	ENSGT00390000001015.d	ENSGT00940000158052.a.h	ENSGT00940000158201 #21	ENSGT00940000160889	ENSGT00940000155481.d #22	ENSGT00940000160511.b #23	ENSGT00940000161226.a	ENSGT00940000156831	ENSGT00390000002172.A.a.f	ENSGT00940000153594.d	ENSGT00940000164942.b	ENSGT00940000156673	ENSGT00390000007848.a.c	ENSGT00940000156847.a	ENSGT00940000166275	ENSGT00940000159596	ENSGT00590000083134.a.b	ENSGT00940000155066.e.a	ENSGT00940000159817	ENSGT00940000157424
Eupercaria_incertae_sedis	ANCESTRAL SPECIES	5	ENSGT00940000158494	ENSGT00390000016956	ENSGT00940000155511.n.a	ENSGT00950000183022.a.a.a	ENSGT00950000183022.a.a.b.a	ENSGT00940000172375	ENSGT00940000162537	ENSGT00940000153313.A	ENSGT00510000048154	ENSGT00940000158872	ENSGT00940000156517	ENSGT00390000001015.d	ENSGT00940000158052.a.h	ENSGT00940000158201 #21	ENSGT00940000160889	ENSGT00940000155481.d #22	ENSGT00940000160511.b #23	ENSGT00940000161226.a	ENSGT00940000156831	ENSGT00390000002172.A.a.f	ENSGT00940000153594.d	ENSGT00940000164942.b	ENSGT00940000156673	ENSGT00390000007848.a.c	ENSGT00940000156847.a	ENSGT00940000166275	ENSGT00940000159596	ENSGT00590000083134.a.b	ENSGT00940000155066.e.a	ENSGT00940000159817	ENSGT00940000157424
Large yellow croaker	MODERN SPECIES	479	ENSLCRG00005017305	mrpl44 (ENSLCRG00005017304)	agfg1a (ENSLCRG00005017303)	SLC19A3 (ENSLCRG00005017299)	slc19a3b (ENSLCRG00005017295)	ENSLCRG00005017231	sphkap (ENSLCRG00005017217)	pid1 (ENSLCRG00005017215)	ENSLCRG00005017212	dner (ENSLCRG00005017211)	trip12 (ENSLCRG00005015268)	ENSLCRG00005015228	ENSLCRG00005015227	RASA2 (ENSLCRG00005013040) #21	ENSLCRG00005013016	rnf7 (ENSLCRG00005013015) #22	grk7b (ENSLCRG00005013014) #23	fzd9b (ENSLCRG00005013012)	baz1b (ENSLCRG00005013010)	bcl7bb (ENSLCRG00005013008)	hip1 (ENSLCRG00005012999)	ENSLCRG00005012994	gdpd1 (ENSLCRG00005012926)	tmem120ab (ENSLCRG00005012882)	porb (ENSLCRG00005009255)	taf15 (ENSLCRG00005009212)	MMP28 (ENSLCRG00005009211)	ENSLCRG00005009210	cul3b (ENSLCRG00005009172)	PDE2A (ENSLCRG00005008984)	ARAP1 (ENSLCRG00005008684)
European seabass	MODERN SPECIES	3	ENSDLAG00005000995	mffa (ENSDLAG00005029436)	ENSDLAG00005031103	mrpl44 (ENSDLAG00005001001)	agfg1a (ENSDLAG00005001014)	SLC19A3 (ENSDLAG00005001067)	daw1 (ENSDLAG00005001203)	sphkap (ENSDLAG00005001219)	pid1 (ENSDLAG00005001256)	dner (ENSDLAG00005001312)	trip12 (ENSDLAG00005001589)	fbxo36a (ENSDLAG00005032746)	ENSDLAG00005001824	RASA2 (ENSDLAG00005001889) #21	ENSDLAG00005031670	rnf7 (ENSDLAG00005003978) #22	grk7b (ENSDLAG00005004016) #23	fzd9b (ENSDLAG00005004431)	baz1b (ENSDLAG00005004501)	ENSDLAG00005005933	ENSDLAG00005006069	gdpd1 (ENSDLAG00005006089)	ENSDLAG00005006235	porb (ENSDLAG00005007045)	taf15 (ENSDLAG00005007422)	ENSDLAG00005007440	ENSDLAG00005007463	ENSDLAG00005007483	ENSDLAG00005027513	ENSDLAG00005032064	ENSDLAG00005029348
Gilthead seabream	MODERN SPECIES	11	megf6 (ENSSAUG00010021572)	MIFFB (ENSSAUG00010021549)	ENSSAUG00010021546	mrpl44 (ENSSAUG00010021544)	agfg1a (ENSSAUG00010021539)	slc19a3b (ENSSAUG00010021535)	daw1 (ENSSAUG00010021528)	sphkap (ENSSAUG00010021523)	pid1 (ENSSAUG00010021517)	dner (ENSSAUG00010021508)	ENSSAUG00010021504	ENSSAUG00010021502	trip12 (ENSSAUG00010019782)	RASA2 (ENSSAUG00010019360) #21	ENSSAUG00010019353	rnf7 (ENSSAUG00010019352) #22	grk7b (ENSSAUG00010019351) #23	fzd9b (ENSSAUG00010019350)	baz1b (ENSSAUG00010018213)	bcl7bb (ENSSAUG00010018206)	hip1 (ENSSAUG00010018125)	ENSSAUG00010018093	gdpd1 (ENSSAUG00010018088)	tmem120ab (ENSSAUG00010017888)	porb (ENSSAUG00010015280)	MMP28 (ENSSAUG00010015249)	ENSSAUG00010015248	taf15 (ENSSAUG00010015246)	cul3b (ENSSAUG00010014703)	PDE2A (ENSSAUG00010014024)	ARAP1 (ENSSAUG00010012469)
Percomorphaceae_D	ANCESTRAL SPECIES	9	ENSGT00390000009776.o	ENSGT00940000158494	ENSGT00390000016956	ENSGT00940000155511.n.a	ENSGT00950000183022.a.a.a	ENSGT00950000183022.a.a.b.a	ENSGT00940000162537	ENSGT00940000153313.A	ENSGT00510000048154	ENSGT00940000158872	ENSGT00940000156517	ENSGT00390000001015.d	ENSGT00940000161449 #20	ENSGT00940000158201 #21	ENSGT00940000160889	ENSGT00940000155481.d #22	ENSGT00940000160511.b #23	ENSGT00940000161226.a	ENSGT00940000156831	ENSGT00390000002172.A.a.f	ENSGT00940000153594.d	ENSGT00940000164942.b	ENSGT00940000156673	ENSGT00390000007848.a.c	ENSGT00940000156847.a	ENSGT00940000166275	ENSGT00940000159596	ENSGT00590000083134.a.b	ENSGT00940000155066.e.a	ENSGT00940000159817	ENSGT00940000157424
Carangaria	ANCESTRAL SPECIES	8	ENSGT00940000158494	ENSGT00390000016956	ENSGT00940000155511.n.a	ENSGT00950000183022.a.a.a	ENSGT00950000183022.a.a.b.a	ENSGT00940000167309	ENSGT00940000162537	ENSGT00940000153313.A	ENSGT00510000048154	ENSGT00940000158872	ENSGT00940000156517	ENSGT00390000001015.d	ENSGT00940000161449 #20	ENSGT00940000158201 #21	ENSGT00940000160889	ENSGT00940000155481.d #22	ENSGT00940000160511.b #23	ENSGT00940000161226.a	ENSGT00940000156831	ENSGT00390000002172.A.a.f	ENSGT00940000153594.d	ENSGT00940000164942.b	ENSGT00940000156673	ENSGT00390000007848.a.c	ENSGT00940000156847.a	ENSGT00940000166275	ENSGT00940000159596	ENSGT00590000083134.a.b	ENSGT00940000155066.e.a	ENSGT00940000159817	ENSGT00940000157424
Pleuronectoidei	ANCESTRAL SPECIES	13	ENSGT00940000159256.o	ENSGT00940000156971.A	ENSGT00390000009776.o	ENSGT00940000158494	ENSGT00390000016956	ENSGT00940000155511.n.a	ENSGT00950000183022.a.a.a	ENSGT00940000162537	ENSGT00940000153313.A	ENSGT00510000048154	ENSGT00940000158872	ENSGT00940000156517	ENSGT00940000161449 #20	ENSGT00940000158201 #21	ENSGT00940000160889	ENSGT00940000155481.d #22	ENSGT00940000160511.b #23	ENSGT00940000161226.a	ENSGT00940000156831	ENSGT00390000002172.A.a.f	ENSGT00940000153594.d	ENSGT00940000164942.b	ENSGT00940000156673	ENSGT00390000007848.a.c	ENSGT00940000156847.a	ENSGT00940000166275	ENSGT00940000159596	ENSGT00590000083134.a.b	ENSGT00940000155066.e.a	ENSGT00940000159817	ENSGT00940000157424
Turbot	MODERN SPECIES	15	megf6 (ENSSMAG00000020332)	mffa (ENSSMAG00000020310)	ENSSMAG00000020303	ENSSMAG00000020296	mrpl44 (ENSSMAG00000020295)	agfg1a (ENSSMAG00000020284)	SLC19A3 (ENSSMAG00000020280)	ENSSMAG00000020243	sphkap (ENSSMAG00000020227)	PID1 (ENSSMAG00000032701)	dner (ENSSMAG00000020181)	trip12 (ENSSMAG00000020145)	ZBTB38 (ENSSMAG00000020140) #20	RASA2 (ENSSMAG00000020094) #21	ENSSMAG00000020086	rnf7 (ENSSMAG00000020080) #22	grk7b (ENSSMAG00000020058) #23	fzd9b (ENSSMAG00000020057)	baz1b (ENSSMAG00000020021)	bcl7bb (ENSSMAG00000020015)	ENSSMAG00000019988	ENSSMAG00000031612	ENSSMAG00000022958	ENSSMAG00000032784	ENSSMAG00000035831	ENSSMAG00000019961	ENSSMAG00000019924	ENSSMAG00000019884	ENSSMAG00000019866	ENSSMAG00000035799	ENSSMAG00000019831
Tongue sole	MODERN SPECIES	14										pid1 (ENSCSEG00000019416)	dner (ENSCSEG00000019411)	trip12 (ENSCSEG00000019400)	ENSCSEG00000019393	ZBTB38 (ENSCSEG00000019392) #20	RASA2 (ENSCSEG00000019362) #21	rnf7 (ENSCSEG00000019349) #22	grk7b (ENSCSEG00000019344) #23	fzd9b (ENSCSEG00000019341)	baz1b (ENSCSEG00000019325)	bcl7bb (ENSCSEG00000019321)	hip1 (ENSCSEG00000019237)	ENSCSEG00000019225	gdpd1 (ENSCSEG00000019216)	tmem120ab (ENSCSEG00000019188)	porb (ENSCSEG00000019170)	taf15 (ENSCSEG00000019154)	MMP28 (ENSCSEG00000019144)	ENSCSEG00000019135	cul3a (ENSCSEG00000019098)	ENSCSEG00000019089	ENSCSEG00000019082
Carangaria_A	ANCESTRAL SPECIES	10	ENSGT00390000009776.o	ENSGT00940000158494	ENSGT00390000016956	ENSGT00940000155511.n.a	ENSGT00950000183022.a.a.a	ENSGT00950000183022.a.a.b.a	ENSGT00940000167309	ENSGT00940000153313.A	ENSGT00510000048154	ENSGT00940000158872	ENSGT00940000156517	ENSGT00390000001015.d	ENSGT00940000161449 #20	ENSGT00940000158201 #21	ENSGT00940000160889	ENSGT00940000155481.d #22	ENSGT00940000160511.b #23	ENSGT00940000161226.a	ENSGT00940000156831	ENSGT00390000002172.A.a.f	ENSGT00940000153594.d	ENSGT00940000164942.b	ENSGT00940000156673	ENSGT00390000007848.a.c	ENSGT00940000156847.a	ENSGT00940000166275	ENSGT00940000159596	ENSGT00590000083134.a.b	ENSGT00940000155066.e.a	ENSGT00940000159817	ENSGT00940000157424
Seriola	ANCESTRAL SPECIES	50	ENSGT00390000009776.o.e	ENSGT00940000158494	ENSGT00390000016956	ENSGT00940000155511.n.a	ENSGT00950000183022.a.a.a	ENSGT00950000183022.a.a.b.a	ENSGT00940000167309	ENSGT00940000153313.A	ENSGT00510000048154	ENSGT00940000158872	ENSGT00940000156517	ENSGT00390000001015.d	ENSGT00940000161449 #20	ENSGT00940000158201 #21	ENSGT00940000160889	ENSGT00940000155481.d #22	ENSGT00940000160511.b #23	ENSGT00940000161226.a	ENSGT00940000156831	ENSGT00390000002172.A.a.f	ENSGT00940000153594.d	ENSGT00940000164942.b	ENSGT00940000156673	ENSGT00390000007848.a.c	ENSGT00940000156847.a	ENSGT00940000159596	ENSGT00590000083134.a.b	ENSGT00940000155066.e.a	ENSGT00940000159817	ENSGT00940000157424	ENSGT00510000047611
Yellowtail amberjack	MODERN SPECIES	2237	mffa (ENSSLDG00000008538)	ENSSLDG00000008554	mrpl44 (ENSSLDG00000008564)	agfg1a (ENSSLDG00000008610)	SLC19A3 (ENSSLDG00000008706)	slc19a3b (ENSSLDG00000008732)	ENSSLDG00000008753	sphkap (ENSSLDG00000008810)	pid1 (ENSSLDG00000008874)	dner (ENSSLDG00000008893)	trip12 (ENSSLDG00000008941)	fbxo36a (ENSSLDG00000009041)	ZBTB38 (ENSSLDG00000009145) #20	RASA2 (ENSSLDG00000009183) #21	ENSSLDG00000009292	rnf7 (ENSSLDG00000009309) #22	grk7b (ENSSLDG00000009324) #23	fzd9b (ENSSLDG00000009342)	baz1b (ENSSLDG00000009405)	bcl7bb (ENSSLDG00000009726)	hip1 (ENSSLDG00000009777)
Greater amberjack	MODERN SPECIES	54	mffa (ENSSDUG00000020149)	ENSSDUG00000020169	mrpl44 (ENSSDUG00000020174)	agfg1a (ENSSDUG00000020188)	SLC19A3 (ENSSDUG00000020266)	slc19a3b (ENSSDUG00000020404)	ENSSDUG00000020422	sphkap (ENSSDUG00000020446)	pid1 (ENSSDUG00000020513)	dner (ENSSDUG00000020530)	trip12 (ENSSDUG00000020590)	fbxo36a (ENSSDUG00000020650)	ZBTB38 (ENSSDUG00000020684) #20	RASA2 (ENSSDUG00000020698) #21	ENSSDUG00000020768	rnf7 (ENSSDUG00000020832) #22	grk7b (ENSSDUG00000020840) #23	fzd9b (ENSSDUG00000020879)	baz1b (ENSSDUG00000020884)	bcl7bb (ENSSDUG00000020976)	hip1 (ENSSDUG00000020986)	ENSSDUG00000021036	gdpd1 (ENSSDUG00000021048)	tmem120ab (ENSSDUG00000021093)	porb (ENSSDUG00000021305)	ENSSDUG00000000075	MMP28 (ENSSDUG00000000115)	ENSSDUG00000000132	cul3b (ENSSDUG00000000174)	PDE2A (ENSSDUG00000000273)	ARAP1 (ENSSDUG00000000326)
Barramundi perch	MODERN SPECIES	366							ENSLCAG00010017390	sphkap (ENSLCAG00010017375)	pid1 (ENSLCAG00010017371)	dner (ENSLCAG00010017368)	trip12 (ENSLCAG00010016935)	fbxo36a (ENSLCAG00010016850)	ENSLCAG00010016847	RASA2 (ENSLCAG00010016254) #21	ENSLCAG00010016083	rnf7 (ENSLCAG00010016073) #22	grk7b (ENSLCAG00010016055) #23	fzd9b (ENSLCAG00010016046)	baz1b (ENSLCAG00010016028)	bcl7bb (ENSLCAG00010016014)	hip1 (ENSLCAG00010015964)	ENSLCAG00010015935	gdpd1 (ENSLCAG00010015933)
Anabantaria	ANCESTRAL SPECIES	9	ENSGT00390000009776.o	ENSGT00940000158494	ENSGT00390000016956	ENSGT00940000155511.n.a	ENSGT00950000183022.a.a.a	ENSGT00950000183022.a.a.b.a	ENSGT00940000162537	ENSGT00940000153313.A	ENSGT00510000048154	ENSGT00940000158872	ENSGT00940000156517	ENSGT00390000001015.d	ENSGT00940000161449 #20	ENSGT00940000158201 #21	ENSGT00940000160889	ENSGT00940000155481.d #22	ENSGT00940000160511.b #23	ENSGT00940000161226.a	ENSGT00940000156831	ENSGT00390000002172.A.a.f	ENSGT00940000153594.d	ENSGT00940000164942.b	ENSGT00940000156673	ENSGT00390000007848.a.c	ENSGT00940000156847.a	ENSGT00940000166275	ENSGT00940000159596	ENSGT00590000083134.a.b	ENSGT00940000155066.e.a	ENSGT00940000159817	ENSGT00940000157424
Zig-zag eel	MODERN SPECIES	4	mffa (ENSMAMG00000004895)	ENSMAMG00000004917	mrpl44 (ENSMAMG00000004925)	agfg1a (ENSMAMG00000004933)	SLC19A3 (ENSMAMG00000004947)	slc19a3b (ENSMAMG00000004962)	daw1 (ENSMAMG00000004992)	sphkap (ENSMAMG00000028523)	pid1 (ENSMAMG00000025383)	dner (ENSMAMG00000005054)	TRIP12 (ENSMAMG00000005083)	ENSMAMG00000005193	ENSMAMG00000027995	ENSMAMG00000025275	RASA2 (ENSMAMG00000005263) #21	rnf7 (ENSMAMG00000027776) #22	grk7b (ENSMAMG00000005392) #23	fzd9b (ENSMAMG00000005462)	baz1b (ENSMAMG00000005483)	bcl7bb (ENSMAMG00000005553)	hip1 (ENSMAMG00000005573)	ENSMAMG00000005728	gdpd1 (ENSMAMG00000005748)	tmem120ab (ENSMAMG00000005775)	porb (ENSMAMG00000005790)	taf15 (ENSMAMG00000005819)	ENSMAMG00000005845	ENSMAMG00000005855	ENSMAMG00000005885	PDE2A (ENSMAMG00000005938)	ENSMAMG00000005991
Anabantoidei	ANCESTRAL SPECIES	14	ENSGT00390000009776.o	ENSGT00940000158494	ENSGT00390000016956	ENSGT00940000155511.n.a	ENSGT00950000183022.a.a.a	ENSGT00950000183022.a.a.b.a	ENSGT00940000162537	ENSGT00940000153313.A	ENSGT00510000048154	ENSGT00940000158872	ENSGT00940000156517	ENSGT00390000001015.d	ENSGT00940000161449 #20	ENSGT00940000158201 #21	ENSGT00940000160889	ENSGT00940000155481.d #22	ENSGT00940000160511.b #23	ENSGT00940000161226.a	ENSGT00940000156831	ENSGT00390000002172.A.a.f	ENSGT00940000153594.d	ENSGT00940000164942.b	ENSGT00940000156673	ENSGT00390000007848.a.c	ENSGT00940000156847.a	ENSGT00940000166275	ENSGT00940000159596	ENSGT00590000083134.a.b	ENSGT00940000155066.e.a	ENSGT00940000159817	ENSGT00940000157424
Climbing perch	MODERN SPECIES	4	mffa (ENSATEG00000004349)	ENSATEG00000004478	mrpl44 (ENSATEG00000004508)	agfg1a (ENSATEG00000004522)	SLC19A3 (ENSATEG00000004539)	ENSATEG00000004821	sphkap (ENSATEG00000004866)	ENSATEG00000028952	PID1 (ENSATEG00000027875)	dner (ENSATEG00000005042)	trip12 (ENSATEG00000005186)	fbxo36a (ENSATEG00000005334)	ZBTB38 (ENSATEG00000026261) #20	RASA2 (ENSATEG00000005393) #21	ENSATEG00000005478	rnf7 (ENSATEG00000005548) #22	grk7b (ENSATEG00000005572) #23	fzd9b (ENSATEG00000005719)	baz1b (ENSATEG00000005729)	bcl7bb (ENSATEG00000005842)	hip1 (ENSATEG00000005853)	ENSATEG00000027470	gdpd1 (ENSATEG00000005904)	tmem120ab (ENSATEG00000005963)	porb (ENSATEG00000006011)	taf15 (ENSATEG00000006084)	ENSATEG00000006101	ENSATEG00000029517	ENSATEG00000006122	PDE2A (ENSATEG00000028427)	ENSATEG00000006256
Siamese fighting fish	MODERN SPECIES	4	mffa (ENSBSLG00000020906)	ENSBSLG00000020905	mrpl44 (ENSBSLG00000020904)	agfg1a (ENSBSLG00000020883)	SLC19A3 (ENSBSLG00000020868)	slc19a3b (ENSBSLG00000020866)	daw1 (ENSBSLG00000020849)	sphkap (ENSBSLG00000020841)	ENSBSLG00000020839	pid1 (ENSBSLG00000020838)	dner (ENSBSLG00000020837)	trip12 (ENSBSLG00000020491)	ENSBSLG00000020437	RASA2 (ENSBSLG00000020120) #21	ENSBSLG00000020077	rnf7 (ENSBSLG00000020064) #22	grk7b (ENSBSLG00000019704) #23	fzd9b (ENSBSLG00000019691)	baz1b (ENSBSLG00000019669)	bcl7bb (ENSBSLG00000019663)	hip1 (ENSBSLG00000019289)	ENSBSLG00000019267	gdpd1 (ENSBSLG00000019169)	tmem120ab (ENSBSLG00000019064)	porb (ENSBSLG00000017866)	taf15 (ENSBSLG00000017775)	MMP28 (ENSBSLG00000017757)	ENSBSLG00000017738	cul3b (ENSBSLG00000017580)	ENSBSLG00000017564	PDE2A (ENSBSLG00000016792)
Pinecone sodierfish	MODERN SPECIES	4	ENSMMDG00005017807	mffa (ENSMMDG00005017878)	dnaaf1 (ENSMMDG00005017881)	mrpl44 (ENSMMDG00005004424)	agfg1a (ENSMMDG00005004441)	SLC19A3 (ENSMMDG00005004592)	ENSMMDG00005005008	sphkap (ENSMMDG00005005021)	pid1 (ENSMMDG00005005030)	dner (ENSMMDG00005005038)	trip12 (ENSMMDG00005005233)	fbxo36a (ENSMMDG00005011229)	ENSMMDG00005011234	RASA2 (ENSMMDG00005011281) #21	ENSMMDG00005013817	rnf7 (ENSMMDG00005013818) #22	grk7b (ENSMMDG00005013825) #23	fzd9b (ENSMMDG00005014011)	baz1b (ENSMMDG00005014020)	bcl7bb (ENSMMDG00005014034)	hip1 (ENSMMDG00005014039)	ENSMMDG00005014126	gdpd1 (ENSMMDG00005014134)	tmem120ab (ENSMMDG00005014178)	porb (ENSMMDG00005014422)	taf15 (ENSMMDG00005017983)	MMP28 (ENSMMDG00005017986)	ENSMMDG00005017991	cul3b (ENSMMDG00005017998)	PDE2A (ENSMMDG00005018235)	ARAP1 (ENSMMDG00005018279)
Cod	MODERN SPECIES	7	aldoca (ENSGMOG00000010596)	srsf1a (ENSGMOG00000030266)	ENSGMOG00000011565	ENSGMOG00000026970	ENSGMOG00000007266	AGFG1 (ENSGMOG00000007273)	slc19a3b (ENSGMOG00000007294)	daw1 (ENSGMOG00000007301)	ENSGMOG00000035663	pid1 (ENSGMOG00000034076)	dner (ENSGMOG00000007335)	trip12 (ENSGMOG00000007345)	ZBTB38 (ENSGMOG00000034041) #20	RASA2 (ENSGMOG00000007395) #21	ENSGMOG00000007410	rnf7 (ENSGMOG00000007419) #22	grk7b (ENSGMOG00000036051) #23	fzd9b (ENSGMOG00000020366)	baz1b (ENSGMOG00000016660)	bcl7bb (ENSGMOG00000016696)	ENSGMOG00000016708	ENSGMOG00000030590	gdpd1 (ENSGMOG00000016760)	ENSGMOG00000016778	ENSGMOG00000016793	ENSGMOG00000017130	ENSGMOG00000032677	ENSGMOG00000017178	ENSGMOG00000017266	ENSGMOG00000017353	CLPB (ENSGMOG00000017368)
Protacanthopterygii	ANCESTRAL SPECIES	7	ENSGT00390000016956	ENSGT00940000155511.n.a	ENSGT00950000185427	ENSGT00950000183022.a.a.a	ENSGT00950000183022.a.a.b.a	ENSGT00940000162537	ENSGT00940000153313.A	ENSGT00510000048154	ENSGT00940000158872	ENSGT00940000156517	ENSGT00390000001015.d	ENSGT00940000161449 #20	ENSGT00940000158201 #21	ENSGT00940000154035.a	ENSGT00940000160889	ENSGT00940000155481 #22	ENSGT00940000160511.b #23	ENSGT00940000161226.a	ENSGT00940000156831	ENSGT00390000002172.A.a.f	ENSGT00940000153594.d	ENSGT00940000164942.b	ENSGT00950000182772.A.a.a.a.b	ENSGT00940000167306	ENSGT00950000182970.C	ENSGT00940000165053	ENSGT00940000160011	ENSGT00550000075007	ENSGT01020000230625	ENSGT00530000063950.a.b	ENSGT00940000159792.C
Salmoninae	DUPLICATION
Salmoninae	ANCESTRAL SPECIES	373																ENSGT00940000155481.e #22	ENSGT00940000160511.b.b #23	ENSGT00940000161226.a.c	ENSGT00940000156831.h	ENSGT00390000002172.A.a.f.c.b	ENSGT00940000153594.d.f	ENSGT01100000263533.b.b.a.a.b	ENSGT00940000164427.a.a.h.a	ENSGT00940000159555.v.a.a	ENSGT00940000167306.b	ENSGT00950000182970.C.i	ENSGT00940000165053.c	ENSGT00940000160011.n	ENSGT00550000075007.z	ENSGT01020000230625.d	ENSGT00530000063950.a.b.e
Huchen	MODERN SPECIES	502															ENSHHUG00000004751	rnf7 (ENSHHUG00000004729) #22	grk7b (ENSHHUG00000004727) #23	fzd9b (ENSHHUG00000004723)	baz1b (ENSHHUG00000004346)	bcl7bb (ENSHHUG00000004332)	hip1 (ENSHHUG00000004301)	ENSHHUG00000004276	ENSHHUG00000004206	ENSHHUG00000004201	MARK4 (ENSHHUG00000004176)	ckma (ENSHHUG00000004071)	klc3 (ENSHHUG00000003997)	ercc2 (ENSHHUG00000003409)	zgc:154093 (ENSHHUG00000003401)	ZC3H4 (ENSHHUG00000003349)	ENSHHUG00000003343
Salmoninae_a	ANCESTRAL SPECIES	3	ENSGT00390000016956.i	ENSGT00940000155511.n.a.a	ENSGT00950000183022.a.a.a.a	ENSGT00940000155511.n.b.f	ENSGT00950000183022.a.a.a.b.a	ENSGT00950000183022.a.a.b.a.f	ENSGT00940000162537	ENSGT00940000153313.A.c	ENSGT00510000048154.d	ENSGT00940000158872.c	ENSGT00940000156517.s	ENSGT00390000001015.d.a	ENSGT00940000161449 #20	ENSGT00940000158201.e #21	ENSGT00940000160889.d	ENSGT00940000155481.e #22	ENSGT00940000160511.b.b #23	ENSGT00940000161226.a.c	ENSGT00940000156831.h	ENSGT00970000196788.J.b	ENSGT00390000002172.A.a.f.c.b	ENSGT00940000153594.d.f	ENSGT01100000263533.b.b.a.a.b	ENSGT00940000164427.a.a.h.a	ENSGT00940000159555.v.a.a	ENSGT00950000182772.A.a.a.a.b.c.a	ENSGT00940000167306.b	ENSGT00950000182970.C.i	ENSGT00940000165053.c	ENSGT00940000160011.n	ENSGT00550000075007.z
Salmo	ANCESTRAL SPECIES	22	ENSGT00940000170518.a	ENSGT00940000157208.e	ENSGT00940000156971.A.a	ENSGT00390000009776.o.j	ENSGT00390000016956.i	ENSGT00940000155511.n.a.a	ENSGT00950000183022.a.a.a.a	ENSGT00940000162537	ENSGT00940000153313.A.c	ENSGT00510000048154.d	ENSGT00940000158872.c	ENSGT00940000156517.s	ENSGT00390000001015.d.a	ENSGT00940000158201.e #21	ENSGT00940000160889.d	ENSGT00940000155481.e #22	ENSGT00940000160511.b.b #23	ENSGT00940000161226.a.c	ENSGT00940000156831.h	ENSGT00970000196788.J.b	ENSGT00390000002172.A.a.f.d.b	ENSGT00390000002172.A.a.f.c.b	ENSGT00940000153594.d.f	ENSGT01100000263533.b.b.a.a.b	ENSGT00940000164427.a.a.h.a	ENSGT00940000159555.v.a.a	ENSGT00950000182772.A.a.a.a.b.c.a	ENSGT00940000167306.b	ENSGT00950000182970.C.i	ENSGT00940000165053.c	ENSGT00940000160011.n
Atlantic salmon	MODERN SPECIES	28	megf6 (ENSSSAG00000046531)	mffa (ENSSSAG00000120732)	mrpl44 (ENSSSAG00000038467)	agfg1a (ENSSSAG00000038172)	SLC19A3 (ENSSSAG00000074739)	ENSSSAG00000107282	daw1 (ENSSSAG00000074663)	sphkap (ENSSSAG00000074647)	pid1 (ENSSSAG00000084390)	dner (ENSSSAG00000074617)	fbxo36a (ENSSSAG00000068452)	ZBTB38 (ENSSSAG00000068448) #20	ENSSSAG00000068606	RASA2 (ENSSSAG00000068267) #21	ENSSSAG00000068244	rnf7 (ENSSSAG00000068233) #22	fa70b (ENSSSAG00000068235)	grk7b (ENSSSAG00000118238) #23	fzd9b (ENSSSAG00000068230)	baz1b (ENSSSAG00000066946)	ENSSSAG00000066896	bcl7bb (ENSSSAG00000066889)	ENSSSAG00000066445	ENSSSAG00000113600	ENSSSAG00000085210	ENSSSAG00000058132	ENSSSAG00000058128	ENSSSAG00000065242	CKM (ENSSSAG00000065166)	ENSSSAG00000116459	klc3 (ENSSSAG00000064802)
River trout	MODERN SPECIES	4	MECOM (ENSSTUG00000010387)	megf6 (ENSSTUG00000009905)	mffa (ENSSTUG00000009785)	mrpl44 (ENSSTUG00000009765)	sphkap (ENSSTUG00000009760)	ENSSTUG00000009757	ENSSTUG00000009755	ENSSTUG00000009754	pid1 (ENSSTUG00000009744)	dner (ENSSTUG00000009707)	trip12 (ENSSTUG00000002290)	fbxo36a (ENSSTUG00000001064)	RASA2 (ENSSTUG00000041787) #21	ENSSTUG00000041665	ENSSTUG00000041629	rnf7 (ENSSTUG00000041612) #22	grk7b (ENSSTUG00000041421) #23	fzd9b (ENSSTUG00000041376)	baz1b (ENSSTUG00000040802)	ENSSTUG00000040755	bcl7bb (ENSSTUG00000040731)	hip1 (ENSSTUG00000040385)	ENSSTUG00000040357	ENSSTUG00000040351	ENSSTUG00000040348	ENSSTUG00000040343	MARK4 (ENSSTUG00000040117)	CKM (ENSSTUG00000040094)	klc3 (ENSSTUG00000040074)	ercc2 (ENSSTUG00000039822)	zgc:154093 (ENSSTUG00000039808)
Oncorhynchus	ANCESTRAL SPECIES	14	ENSGT00390000016956.i	ENSGT00940000155511.n.a.a	ENSGT00950000183022.a.a.a.a	ENSGT00940000155511.n.b.f	ENSGT00950000183022.a.a.a.b.a	ENSGT00950000183022.a.a.b.a.f	ENSGT00940000162537	ENSGT00940000153313.A.c	ENSGT00510000048154.d	ENSGT00940000158872.c	ENSGT00940000156517.s	ENSGT00390000001015.d.a	ENSGT00940000161449 #20	ENSGT00940000158201.e #21	ENSGT00940000160889.d	ENSGT00940000155481.e #22	ENSGT00940000160511.b.b #23	ENSGT00940000161226.a.c	ENSGT00940000156831.h	ENSGT00390000002172.A.a.f.c.b	ENSGT00970000196788.J.b	ENSGT00390000002172.A.a.f.d.b	ENSGT00940000153594.d.f	ENSGT01100000263533.b.b.a.a.b.d	ENSGT00940000164427.a.a.h.a	ENSGT00940000159555.v.a.a	ENSGT00950000182772.A.a.a.a.b.c.a	ENSGT00940000167306.b	ENSGT00950000182970.C.i	ENSGT00940000165053.c	ENSGT00940000160011.n
Oncorhynchus_a	ANCESTRAL SPECIES	41	ENSGT00390000016956.i	ENSGT00940000155511.n.a.a	ENSGT00950000183022.a.a.a.a	ENSGT00940000155511.n.b.f	ENSGT00950000183022.a.a.a.b.a	ENSGT00950000183022.a.a.b.a.f	ENSGT00940000162537	ENSGT00940000153313.A.c	ENSGT00510000048154.d	ENSGT00940000158872.c	ENSGT00940000156517.s	ENSGT00390000001015.d.a	ENSGT00940000161449 #20	ENSGT00940000158201.e #21	ENSGT00940000160889.d	ENSGT00940000155481.e #22	ENSGT00940000160511.b.b #23	ENSGT00940000161226.a.c	ENSGT00940000156831.h	ENSGT00390000002172.A.a.f.c.b	ENSGT00970000196788.J.b	ENSGT00390000002172.A.a.f.d.b	ENSGT00940000153594.d.f	ENSGT00940000159555.v.a.a	ENSGT00950000182772.A.a.a.a.b.c.a	ENSGT00940000167306.b	ENSGT00940000165053.c	ENSGT00940000160011.n	ENSGT00550000075007.z	ENSGT01020000230625.d	ENSGT00530000063950.a.b.e
Coho salmon	MODERN SPECIES	9	mffa (ENSOKIG00005005281)	mrpl44 (ENSOKIG00005005296)	AGFG1 (ENSOKIG00005005320)	SLC19A3 (ENSOKIG00005005347)	ENSOKIG00005005362	daw1 (ENSOKIG00005005418)	sphkap (ENSOKIG00005005484)	pid1 (ENSOKIG00005005500)	dner (ENSOKIG00005005538)	trip12 (ENSOKIG00005005841)	fbxo36a (ENSOKIG00005008181)	ENSOKIG00005008193 #20	RASA2 (ENSOKIG00005008315) #21	ENSOKIG00005008947	ENSOKIG00005008978	rnf7 (ENSOKIG00005009038) #22	grk7b (ENSOKIG00005009056) #23	fzd9b (ENSOKIG00005009102)	baz1b (ENSOKIG00005009152)	bcl7bb (ENSOKIG00005009360)	hip1 (ENSOKIG00005009611)	ENSOKIG00005012706	ENSOKIG00005012735	ENSOKIG00005012786	MARK4 (ENSOKIG00005012854)	ENSOKIG00005013121	klc3 (ENSOKIG00005013161)	zgc:154093 (ENSOKIG00005016740)	ZC3H4 (ENSOKIG00005016744)	sae1 (ENSOKIG00005016752)	bbc3 (ENSOKIG00005016768)
Chinook salmon	MODERN SPECIES	5	mrpl44 (ENSOTSG00005024512)	agfg1a (ENSOTSG00005024509)	SLC19A3 (ENSOTSG00005024506)	SLC19A3 (ENSOTSG00005024504)	slc19a3b (ENSOTSG00005024495)	ENSOTSG00005024408	sphkap (ENSOTSG00005024406)	pid1 (ENSOTSG00005024404)	dner (ENSOTSG00005024403)	trip12 (ENSOTSG00005012826)	fbxo36a (ENSOTSG00005012798)	ENSOTSG00005012797 #20	RASA2 (ENSOTSG00005012117) #21	ENSOTSG00005012106	ENSOTSG00005012105	rnf7 (ENSOTSG00005012102) #22	grk7b (ENSOTSG00005012094) #23	fzd9b (ENSOTSG00005012093)	ENSOTSG00005012091	baz1b (ENSOTSG00005011976)	ENSOTSG00005011975	bcl7bb (ENSOTSG00005011974)	hip1 (ENSOTSG00005011910)	ENSOTSG00005011894	ENSOTSG00005011893	ENSOTSG00005011892	ENSOTSG00005011891	ENSOTSG00005011890	ENSOTSG00005011888	klc3 (ENSOTSG00005011887)	zgc:154093 (ENSOTSG00005011885)
Rainbow trout	MODERN SPECIES	16	SLC19A3 (ENSOMYG00000058122)	SLC19A3 (ENSOMYG00000035806)	ENSOMYG00000077624	daw1 (ENSOMYG00000035781)	ENSOMYG00000062471	sphkap (ENSOMYG00000035764)	pid1 (ENSOMYG00000035745)	dner (ENSOMYG00000035724)	ENSOMYG00000035664	ENSOMYG00000035645	TRIP12 (ENSOMYG00000032748)	RASA2 (ENSOMYG00000029547) #21	shbgb (ENSOMYG00000028548)	ENSOMYG00000067579	ENSOMYG00000028476	rnf7 (ENSOMYG00000028447) #22	grk7b (ENSOMYG00000028440) #23	fzd9b (ENSOMYG00000040357)	baz1b (ENSOMYG00000040339)	ENSOMYG00000040292	bcl7bb (ENSOMYG00000040277)	ENSOMYG00000038283	ENSOMYG00000046044	ENSOMYG00000037961	ENSOMYG00000073656	ENSOMYG00000037957	ENSOMYG00000037895	CKM (ENSOMYG00000037749)	klc3 (ENSOMYG00000037717)	ercc2 (ENSOMYG00000037685)	zgc:154093 (ENSOMYG00000037679)
Salmoninae	ANCESTRAL SPECIES	75	ENSGT00940000155511.n.a.b	ENSGT00950000185427	ENSGT00950000183022.a.a.a.b.b	ENSGT00950000183022.a.a.b.a.e	ENSGT00940000166116	ENSGT00940000153313.A.d	ENSGT00510000048154.c	ENSGT00940000158872.d	ENSGT00940000156517.t	ENSGT00390000001015.d.b	ENSGT01070000253972.a	ENSGT00940000158052.a.h	ENSGT00940000158201.f #21	ENSGT01000000220253	ENSGT00940000160889.c	ENSGT00940000155481.f #22	ENSGT00940000160511.b.a #23	ENSGT00940000161226.a.d	ENSGT00940000156831.g	ENSGT00390000002172.A.a.f.c.a	ENSGT00940000153594.d.e	ENSGT00940000164942.b	ENSGT00940000162179.e.a.a.j.b	ENSGT00940000164427.a.a.h.b	ENSGT00940000159555.v.a.b	ENSGT01070000253869	ENSGT00950000182772.A.a.a.a.b	ENSGT00940000167306.a	ENSGT00950000182970.C.j	ENSGT00940000165053.d	ENSGT00940000160011.m
Salmoninae_a	ANCESTRAL SPECIES	19	ENSGT00940000155511.n.a.b	ENSGT00950000185427	ENSGT00950000183022.a.a.a.b.b	ENSGT00950000183022.a.a.b.a.e	ENSGT00940000166116.c	ENSGT00940000153313.A.d	ENSGT00510000048154.c	ENSGT00940000158872.d	ENSGT00940000156517.t	ENSGT00390000001015.d.b	ENSGT01070000253972.a	ENSGT00940000158052.a.h	ENSGT00940000158201.f #21	ENSGT01000000220253	ENSGT00940000160889.c	ENSGT00940000155481.f #22	ENSGT00940000160511.b.a #23	ENSGT00940000161226.a.d	ENSGT00940000156831.g	ENSGT00390000002172.A.a.f.c.a	ENSGT00970000196788.E.a.a	ENSGT00390000002172.A.a.f.d.a	ENSGT00940000153594.d.e	ENSGT00940000164942.b	ENSGT00940000162179.e.a.a.j.b	ENSGT00940000164427.a.a.h.b	ENSGT00940000159555.v.a.b	ENSGT01070000253869	ENSGT00950000182772.A.a.a.a.b.c.b	ENSGT00940000167306.a	ENSGT00950000182970.C.j
Oncorhynchus	ANCESTRAL SPECIES	24	ENSGT00940000155511.n.a.b	ENSGT00950000185427	ENSGT00950000183022.a.a.a.b.b	ENSGT00950000183022.a.a.b.a.e	ENSGT00940000161049	ENSGT00940000153313.A.d	ENSGT00510000048154.c	ENSGT00940000158872.d	ENSGT00940000156517.t	ENSGT00390000001015.d.b	ENSGT01070000253972.a	ENSGT00940000158052.a.h	ENSGT00940000158201.f #21	ENSGT01000000220253	ENSGT00940000160889.c	ENSGT00940000155481.f #22	ENSGT00940000160511.b.a #23	ENSGT00940000161226.a.d	ENSGT00940000156831.g	ENSGT00390000002172.A.a.f.c.a	ENSGT00970000196788.E.a.a	ENSGT00390000002172.A.a.f.d.a	ENSGT00940000153594.d.e	ENSGT00940000164942.b	ENSGT01100000263533.b.b.a.a.b.c	ENSGT00940000164427.a.a.h.b	ENSGT00940000159555.v.a.b	ENSGT00950000182772.A.a.a.a.b.c.b	ENSGT00940000167306.a	ENSGT00950000182970.C.j	ENSGT00940000165053.d
Oncorhynchus_a	ANCESTRAL SPECIES	25	ENSGT00390000009776.o.i	ENSGT00390000016956.j	ENSGT00940000155511.n.a.b	ENSGT00950000183022.a.a.a.b.b	ENSGT00950000183022.a.a.b.a.e	ENSGT00940000161049	ENSGT00940000153313.A.d	ENSGT00510000048154.c	ENSGT00940000158872.d	ENSGT00940000156517.t	ENSGT01070000253972.a	ENSGT00940000158052.a.h	ENSGT00940000158201.f #21	ENSGT01000000220253	ENSGT00940000160889.c	ENSGT00940000155481.f #22	ENSGT00940000160511.b.a #23	ENSGT00940000161226.a.d	ENSGT00940000156831.g	ENSGT00390000002172.A.a.f.c.a	ENSGT00970000196788.E.a.a	ENSGT00390000002172.A.a.f.d.a	ENSGT00940000153594.d.e	ENSGT00940000164942.b	ENSGT01100000263533.b.b.a.a.b.c	ENSGT00940000164427.a.a.h.b	ENSGT00940000159555.v.a.b	ENSGT00950000182772.A.a.a.a.b.c.b	ENSGT00940000167306.a	ENSGT00950000182970.C.j	ENSGT00940000165053.d
Coho salmon	MODERN SPECIES	6	MECOM (ENSOKIG00005046805)	megf6 (ENSOKIG00005046617)	ENSOKIG00005046597	mffa (ENSOKIG00005046594)	mrpl44 (ENSOKIG00005046587)	agfg1a (ENSOKIG00005046582)	slc19a3b (ENSOKIG00005046580)	ENSOKIG00005046551	sphkap (ENSOKIG00005046531)	pid1 (ENSOKIG00005046518)	dner (ENSOKIG00005046503)	trip12 (ENSOKIG00005042635)	ENSOKIG00005042041	RASA2 (ENSOKIG00005039755) #21	ENSOKIG00005039554	rnf7 (ENSOKIG00005039522) #22	grk7b (ENSOKIG00005039516) #23	fzd9b (ENSOKIG00005039502)	baz1b (ENSOKIG00005039312)	ENSOKIG00005039257	bcl7bb (ENSOKIG00005039219)	ENSOKIG00005038531	ENSOKIG00005038458	ENSOKIG00005038443	MARK4 (ENSOKIG00005038036)	CKM (ENSOKIG00005037939)	klc3 (ENSOKIG00005037922)	ercc2 (ENSOKIG00005037829)	zgc:154093 (ENSOKIG00005037796)	ENSOKIG00005037794	ZC3H4 (ENSOKIG00005037718)
Chinook salmon	MODERN SPECIES	4	tncb (ENSOTSG00005030642)	ENSOTSG00005030600	nsmfb (ENSOTSG00005030598)	ENSOTSG00005030594	ENSOTSG00005024077	mrpl41 (ENSOTSG00005024044)	hsd17b3 (ENSOTSG00005024039)	ENSOTSG00005024035	dner (ENSOTSG00005024034)	trip12 (ENSOTSG00005007162)	ENSOTSG00005007117	ENSOTSG00005007116	RASA2 (ENSOTSG00005006939) #21	ENSOTSG00005006937	ENSOTSG00005006936	rnf7 (ENSOTSG00005006935) #22	grk7b (ENSOTSG00005006934) #23	fzd9b (ENSOTSG00005006931)	baz1b (ENSOTSG00005006929)	bcl7bb (ENSOTSG00005006926)	hip1 (ENSOTSG00005006093)	ENSOTSG00005006085	ENSOTSG00005006084	ENSOTSG00005006083	MARK4 (ENSOTSG00005006022)	CKM (ENSOTSG00005006004)	klc3 (ENSOTSG00005006002)	ercc2 (ENSOTSG00005005998)	zgc:154093 (ENSOTSG00005005995)	ZC3H4 (ENSOTSG00005005994)	sae1 (ENSOTSG00005005993)
Rainbow trout	MODERN SPECIES	19	megf6 (ENSOMYG00000045943)	mffa (ENSOMYG00000045935)	mrpl44 (ENSOMYG00000045930)	agfg1a (ENSOMYG00000045915)	ENSOMYG00000045911	ENSOMYG00000045908	slc19a3b (ENSOMYG00000045905)	ENSOMYG00000045904	sphkap (ENSOMYG00000045897)	pid1 (ENSOMYG00000045889)	dner (ENSOMYG00000045875)	trip12 (ENSOMYG00000041992)	fbxo36a (ENSOMYG00000041559)	RASA2 (ENSOMYG00000041372) #21	ENSOMYG00000041311	rnf7 (ENSOMYG00000041304) #22	ENSOMYG00000071384	grk7b (ENSOMYG00000041300) #23	baz1b (ENSOMYG00000041275)	bcl7bb (ENSOMYG00000041238)	ENSOMYG00000041135	ENSOMYG00000041050	ENSOMYG00000041042	ENSOMYG00000068221	ENSOMYG00000070121	ENSOMYG00000041299	ENSOMYG00000040566	CKM (ENSOMYG00000040438)	klc3 (ENSOMYG00000040406)	ercc2 (ENSOMYG00000040371)	zgc:154093 (ENSOMYG00000040315)
Salmo	ANCESTRAL SPECIES	7	ENSGT00940000157208.f	ENSGT00940000156971.A.b	ENSGT00390000009776.o.i	ENSGT00390000016956.j	ENSGT00940000155511.n.a.b	ENSGT00950000183022.a.a.b.a.e	ENSGT00940000166116.c	ENSGT00940000153313.A.d	ENSGT00510000048154.c	ENSGT00940000158872.d	ENSGT00940000156517.t	ENSGT00390000001015.d.b	ENSGT00940000161449 #20	ENSGT00940000158201.f #21	ENSGT00940000160889.c	ENSGT00940000155481.f #22	ENSGT00940000160511.b.a #23	ENSGT00940000161226.a.d	ENSGT00940000156831.g	ENSGT00970000196788.E.a.a	ENSGT00390000002172.A.a.f.d.a	ENSGT00390000002172.A.a.f.c.a	ENSGT00940000153594.d.e	ENSGT00940000164942.b	ENSGT00940000162179.e.a.a.j.b	ENSGT00940000164427.a.a.h.b	ENSGT00940000159555.v.a.b	ENSGT01070000253869	ENSGT00950000182772.A.a.a.a.b.c.b	ENSGT00940000167306.a	ENSGT00950000182970.C.j
Atlantic salmon	MODERN SPECIES	12	ENSSSAG00000041461	megf6 (ENSSSAG00000039229)	mffa (ENSSSAG00000086414)	mrpl44 (ENSSSAG00000046036)	agfg1a (ENSSSAG00000076037)	ENSSSAG00000076030	ENSSSAG00000075979	sphkap (ENSSSAG00000075957)	DNER (ENSSSAG00000075926)	ENSSSAG00000068552	ENSSSAG00000105544	ENSSSAG00000068825	rasa2 (ENSSSAG00000065814) #21	ENSSSAG00000065714	ENSSSAG00000065700	rnf7 (ENSSSAG00000065691) #22	grk7b (ENSSSAG00000065566) #23	fzd9b (ENSSSAG00000065556)	baz1b (ENSSSAG00000063528)	ENSSSAG00000063459	ENSSSAG00000089532	bcl7bb (ENSSSAG00000109239)	ENSSSAG00000058306	ENSSSAG00000088515	ENSSSAG00000089564	ENSSSAG00000099530	ENSSSAG00000057766	ENSSSAG00000057731	CKM (ENSSSAG00000057721)	klc3 (ENSSSAG00000057611)	ercc2 (ENSSSAG00000057436)
River trout	MODERN SPECIES	18	MECOM (ENSSTUG00000035556)	megf6 (ENSSTUG00000034989)	mffa (ENSSTUG00000034954)	mrpl44 (ENSSTUG00000034945)	agfg1a (ENSSTUG00000034917)	slc19a3b (ENSSTUG00000034891)	ENSSTUG00000034639	sphkap (ENSSTUG00000034584)	pid1 (ENSSTUG00000034568)	dner (ENSSTUG00000034448)	trip12 (ENSSTUG00000024712)	fbxo36a (ENSSTUG00000024308)	ENSSTUG00000024301 #20	RASA2 (ENSSTUG00000022522) #21	ENSSTUG00000022463	rnf7 (ENSSTUG00000022459) #22	grk7b (ENSSTUG00000022411) #23	fzd9b (ENSSTUG00000022387)	baz1b (ENSSTUG00000022106)	ENSSTUG00000022072	bcl7bb (ENSSTUG00000022053)	hip1 (ENSSTUG00000021828)	ENSSTUG00000021793	ENSSTUG00000021781	ENSSTUG00000021766	MARK4 (ENSSTUG00000021550)	ENSSTUG00000021530	CKM (ENSSTUG00000021522)	klc3 (ENSSTUG00000021503)	ercc2 (ENSSTUG00000021440)	zgc:154093 (ENSSTUG00000021434)
Huchen	MODERN SPECIES	261								ENSHHUG00000045399	dner (ENSHHUG00000045404)	trip12 (ENSHHUG00000045499)	fbxo36a (ENSHHUG00000045784)	ENSHHUG00000045790 #20	RASA2 (ENSHHUG00000045797) #21	ENSHHUG00000045814	ENSHHUG00000045827	rnf7 (ENSHHUG00000045860) #22	grk7b (ENSHHUG00000045884) #23	fzd9b (ENSHHUG00000045885)	baz1b (ENSHHUG00000045889)	bcl7bb (ENSHHUG00000045927)	hip1 (ENSHHUG00000045943)	ENSHHUG00000046013	ENSHHUG00000046021	ENSHHUG00000046078	MARK4 (ENSHHUG00000046081)	CKM (ENSHHUG00000046119)	klc3 (ENSHHUG00000046178)	ercc2 (ENSHHUG00000046317)	zgc:154093 (ENSHHUG00000046338)	ENSHHUG00000046344	ENSHHUG00000046359
Northern pike	MODERN SPECIES		megf6 (ENSELUG00000019285)	mffa (ENSELUG00000019217)	mrpl44 (ENSELUG00000019187)	agfg1a (ENSELUG00000019172)	SLC19A3 (ENSELUG00000001551)	slc19a3b (ENSELUG00000019117)	daw1 (ENSELUG00000019092)	sphkap (ENSELUG00000019019)	pid1 (ENSELUG00000033659)	dner (ENSELUG00000018903)	trip12 (ENSELUG00000018896)	fbxo36a (ENSELUG00000018838)	ENSELUG00000030354	RASA2 (ENSELUG00000018810) #21	ENSELUG00000001446	rnf7 (ENSELUG00000025862) #22	grk7b (ENSELUG00000018678) #23	fzd9b (ENSELUG00000018656)	baz1b (ENSELUG00000018642)	BCL7B (ENSELUG00000001376)	hip1 (ENSELUG00000018521)	ENSELUG00000018453	ENSELUG00000018405	ENSELUG00000032278	MARK4 (ENSELUG00000018107)	CKM (ENSELUG00000018088)	klc3 (ENSELUG00000018079)	ercc2 (ENSELUG00000018055)	zgc:154093 (ENSELUG00000017978)	ZC3H4 (ENSELUG00000017959)	sae1 (ENSELUG00000017913)
Osteoglossiformes	ANCESTRAL SPECIES	246	ENSGT00890000139453.b.e.a	ENSGT00940000153991.b.b	ENSGT00940000155929.a.b	ENSGT00390000013063	ENSGT00510000048354	ENSGT00940000166956	ENSGT00940000153936.a	ENSGT00950000182887.C.b.a.m.a	ENSGT01010000222847	ENSGT00940000154474.C	ENSGT00390000004912	ENSGT00940000165563.a	ENSGT00390000018525.b	ENSGT00730000111130	ENSGT00940000161528	ENSGT00940000155481 #22	ENSGT00940000160511.a #23	ENSGT01000000214434.A #27	ENSGT00670000098080 #28	ENSGT00940000162473	ENSGT00390000018687	ENSGT00940000156055.gc	ENSGT00940000161729	ENSGT01030000234621.A
Asian bonytongue	MODERN SPECIES	17	saga (ENSSFOG00015027131)	ENSSFOG00015030110 ##12	ENSSFOG00015027872	ENSSFOG00015029065	ENSSFOG00015032758	cldn15la (ENSSFOG00015033047)	saga (ENSSFOG00015024198)	ENSSFOG00015024200	ENSSFOG00015024201	ENSSFOG00015031578	polr2d (ENSSFOG00015024204)	ENSSFOG00015024203	sft2d3 (ENSSFOG00015029624)	WDR33 (ENSSFOG00015024205)	DUSP28 (ENSSFOG00015024207)	rnf7 (ENSSFOG00015024881) #22	grk7a (ENSSFOG00015024209) #23	gk5 (ENSSFOG00015024210) #27	xrn1 (ENSSFOG00015024211) #28	ppp1r7 (ENSSFOG00015024212)	ENSSFOG00015024213	tfa (ENSSFOG00015024214)	ENSSFOG00015024215	PCYT1A (ENSSFOG00015024216)	zgc:92744 (ENSSFOG00015024217)	SUCNR1 (ENSSFOG00015024218)
P. kingsleyae	MODERN SPECIES	57	ENSPKIG00000012760	cldn15la (ENSPKIG00000012740)	atg16l1 (ENSPKIG00000012688)	saga (ENSPKIG00000012574)	ENSPKIG00000012321	ENSPKIG00000012214	ENSPKIG00000012189	polr2d (ENSPKIG00000012166)	ENSPKIG00000012152	sft2d3 (ENSPKIG00000012139)	ENSPKIG00000012123	wdr33 (ENSPKIG00000012104)	DUSP28 (ENSPKIG00000012080)	ENSPKIG00000012064	ENSPKIG00000012053 #20	rnf7 (ENSPKIG00000012033) #22	grk7a (ENSPKIG00000012017) #23	ENSPKIG00000011995 #24	gk5 (ENSPKIG00000011960) #27	ENSPKIG00000011925 #28	ENSPKIG00000011903 #28	ppp1r7 (ENSPKIG00000011862)	ubxn7 (ENSPKIG00000011801)	ENSPKIG00000011763	ENSPKIG00000011737	PSMD2 (ENSPKIG00000011651)	ENSPKIG00000011576	AP2M1 (ENSPKIG00000011484)	pcyt1ab (ENSPKIG00000011434)	zgc:92744 (ENSPKIG00000011400)	SUCNR1 (ENSPKIG00000011391)
Spotted gar	MODERN SPECIES	652	ENSLOCG00000008306	slc19a3b (ENSLOCG00000008297)	daw1 (ENSLOCG00000008284)	sphkap (ENSLOCG00000008263)	pid1 (ENSLOCG00000008242)	dner (ENSLOCG00000008223)	trip12 (ENSLOCG00000008188)	fbxo36b (ENSLOCG00000008178)	SLC16A14 (ENSLOCG00000008168)	ENSLOCG00000008156	ZBTB38 (ENSLOCG00000017408) #20	RASA2 (ENSLOCG00000008121) #21	ENSLOCG00000008107	ENSLOCG00000008084	ENSLOCG00000008075	rnf7 (ENSLOCG00000008065) #22	grk7b (ENSLOCG00000008038) #23	atp1b3b (ENSLOCG00000008025) #24	tfdp2 (ENSLOCG00000008008) #26	gk5 (ENSLOCG00000007996) #27	xrn1 (ENSLOCG00000007944) #28	ATR (ENSLOCG00000007924) #29	pls1 (ENSLOCG00000007909) #30	trpc1 (ENSLOCG00000007889) #31	pcolce2b (ENSLOCG00000007866) #32	u2surp (ENSLOCG00000007828) #34	chst2a (ENSLOCG00000017407) #35	ENSLOCG00000007817	SLC9A9 (ENSLOCG00000007796) #37	dipk2aa (ENSLOCG00000007771)	plod2 (ENSLOCG00000007750)
Reedfish	MODERN SPECIES	10	slc19a3b (ENSECRG00000013661)	daw1 (ENSECRG00000013687)	sphkap (ENSECRG00000013714)	pid1 (ENSECRG00000013742)	ENSECRG00000013756	dner (ENSECRG00000013767)	trip12 (ENSECRG00000013866)	fbxo36a (ENSECRG00000014064)	SLC16A14 (ENSECRG00000014080)	ENSECRG00000014107	ENSECRG00000014120	ZBTB38 (ENSECRG00000014143) #20	RASA2 (ENSECRG00000014177) #21	ENSECRG00000014238	ENSECRG00000014260	rnf7 (ENSECRG00000014296) #22	grk7b (ENSECRG00000014322) #23	atp1b3b (ENSECRG00000014354) #24	TFDP2 (ENSECRG00000014401) #26	ENSECRG00000014447	pls1 (ENSECRG00000014473) #30	trpc1 (ENSECRG00000014535) #31	pcolce2b (ENSECRG00000014562) #32	u2surp (ENSECRG00000014625) #34	chst2a (ENSECRG00000014684) #35	CHST2 (ENSECRG00000014726) #35	dipk2aa (ENSECRG00000014866)	ENSECRG00000014894	plod2 (ENSECRG00000014947)	PLSCR1 (ENSECRG00000015050)	ENSECRG00000015112
Elephant shark	MODERN SPECIES	1486	mrpl44 (ENSCMIG00000008769)	agfg1b (ENSCMIG00000008767)	SLC19A3 (ENSCMIG00000008763)	eif4a2 (ENSCMIG00000008569)	rfc4 (ENSCMIG00000008483)	ZNF639 (ENSCMIG00000008476)	ENSCMIG00000008474	RASA2 (ENSCMIG00000008181) #21	ZBTB38 (ENSCMIG00000008077) #20	ENSCMIG00000008074	SLC16A14 (ENSCMIG00000008071)	fbxo36a (ENSCMIG00000008069)	trip12 (ENSCMIG00000007467)	DNER (ENSCMIG00000007234)	pid1 (ENSCMIG00000007230)	rnf7 (ENSCMIG00000007226) #22	grk7b (ENSCMIG00000007186) #23	atp1b3b (ENSCMIG00000007163) #24	TFDP2 (ENSCMIG00000007155) #26	gk5 (ENSCMIG00000007147) #27	xrn1 (ENSCMIG00000007051) #28	ATR (ENSCMIG00000006960) #29	PAQR9 (ENSCMIG00000006951) #33	pls1 (ENSCMIG00000006943) #30	trpc1 (ENSCMIG00000006917) #31	pcolce2b (ENSCMIG00000006877) #32	u2surp (ENSCMIG00000006777) #34	chst2a (ENSCMIG00000006759) #35	ENSCMIG00000006756 #37	ENSCMIG00000006753	dipk2aa (ENSCMIG00000006751)
Ciona	ANCESTRAL SPECIES	992															ENSGT00940000155499	ENSGT00940000155481 #22
Ciona savignyi	MODERN SPECIES	181	ENSCSAVG00000007269	ENSCSAVG00000007267	ENSCSAVG00000007261	ENSCSAVG00000007256	ENSCSAVG00000006424	ENSCSAVG00000006418	ENSCSAVG00000006414	ENSCSAVG00000005368	ENSCSAVG00000004468	ENSCSAVG00000004331	ENSCSAVG00000004327	ENSCSAVG00000004325	ENSCSAVG00000004322	ENSCSAVG00000004305	ENSCSAVG00000004303	ENSCSAVG00000004301 #22	ENSCSAVG00000004297	ENSCSAVG00000004293	ENSCSAVG00000004284	ENSCSAVG00000004281	ENSCSAVG00000004262	ENSCSAVG00000004260	ENSCSAVG00000004176	ENSCSAVG00000004174	ENSCSAVG00000004168	ENSCSAVG00000004165	ENSCSAVG00000004160	ENSCSAVG00000004156	ENSCSAVG00000004154	ENSCSAVG00000004147	ENSCSAVG00000004141
Ciona intestinalis	MODERN SPECIES	29							ENSCING00000001374	ENSCING00000012340	ENSCING00000012339	ENSCING00000020651	ENSCING00000012336	ENSCING00000012337	ENSCING00000012335	ENSCING00000023222	ENSCING00000012334	ENSCING00000001372 #22	ENSCING00000001369	ENSCING00000001371	ENSCING00000024765	ENSCING00000012333	ENSCING00000010134	ENSCING00000024883	ENSCING00000000186	ENSCING00000000188	ENSCING00000023501	ENSCING00000000191	ENSCING00000000195	ENSCING00000003602	ENSCING00000003608	ENSCING00000003618	ENSCING00000022943