Glires ANCESTRAL SPECIES 19 ENSGT00940000153892.B ENSGT00940000158699 ENSGT00940000156664 #11 ENSGT00950000183160.B #12 ENSGT00940000154764 #13 ENSGT00550000075141 #14 ENSGT00390000016776 #15 ENSGT00940000156599 #16 ENSGT00440000037606.a ENSGT00940000160709 #17 ENSGT00390000012041 #18 ENSGT01020000230351.A #19 ENSGT00390000010194 #20 ENSGT00390000010780 ENSGT00940000161539 #21 ENSGT00390000004796 #22 ENSGT00390000016767 #23 ENSGT00950000183078.b.b #24 ENSGT00400000022306 #25 ENSGT00940000162586 #26 ENSGT00940000162734 ENSGT00940000162931 ENSGT00940000163022 ENSGT00940000164587 ENSGT00940000162949 ENSGT00940000163459 ENSGT00960000192142 ENSGT00390000013263 Rodentia ANCESTRAL SPECIES 20 ENSGT00940000153892.B ENSGT00940000158699 ENSGT00940000156664 #11 ENSGT00950000183160.B #12 ENSGT00940000154764 #13 ENSGT00550000075141 #14 ENSGT00390000016776 #15 ENSGT00940000156599 #16 ENSGT00440000037606.a ENSGT00940000160709 #17 ENSGT00390000012041 #18 ENSGT01020000230351.A #19 ENSGT00390000010194 #20 ENSGT00390000010780 ENSGT00940000161539 #21 ENSGT00390000004796 #22 ENSGT00390000016767 #23 ENSGT00950000183078.b.b #24 ENSGT00400000022306 #25 ENSGT00940000162586 #26 ENSGT00940000162734 ENSGT00940000162931 ENSGT00940000163022 ENSGT00940000164587 ENSGT00940000162949 ENSGT00940000163459 Rodentia_B ANCESTRAL SPECIES 22 ENSGT00940000159783.l ENSGT00940000153892.B ENSGT00940000158699 ENSGT00940000156664 #11 ENSGT00950000183160.B #12 ENSGT00940000154764 #13 ENSGT00550000075141 #14 ENSGT00390000016776 #15 ENSGT00940000156599 #16 ENSGT00940000160709 #17 ENSGT00390000012041 #18 ENSGT01020000230351.A #19 ENSGT00390000010194 #20 ENSGT00390000010780 ENSGT00940000161539 #21 ENSGT00390000004796 #22 ENSGT00390000016767 #23 ENSGT00950000183078.b.b #24 ENSGT00400000022306 #25 ENSGT00940000162586 #26 ENSGT00940000162734 Myomorpha ANCESTRAL SPECIES 30 ENSGT00940000159783.l ENSGT00940000153892.B ENSGT00940000158699 ENSGT00940000156664 #11 ENSGT00950000183160.B #12 ENSGT00940000154764 #13 ENSGT00550000075141 #14 ENSGT00390000016776 #15 ENSGT00940000156599 #16 ENSGT00940000160709 #17 ENSGT00390000012041 #18 ENSGT01020000230351.A #19 ENSGT00390000010194 #20 ENSGT00390000010780 ENSGT00940000161539 #21 ENSGT00390000004796 #22 ENSGT00390000016767 #23 ENSGT00950000183078.b.b #24 ENSGT00400000022306 #25 ENSGT00940000162586 #26 ENSGT00940000162734 Muroidea ANCESTRAL SPECIES 28 ENSGT00940000159783.l ENSGT00940000153892.B ENSGT00940000158699 ENSGT00940000156664 #11 ENSGT00950000183160.B #12 ENSGT00940000154764 #13 ENSGT00550000075141 #14 ENSGT00390000016776 #15 ENSGT00940000156599 #16 ENSGT00940000160709 #17 ENSGT00390000012041 #18 ENSGT01020000230351.A #19 ENSGT00390000010194 #20 ENSGT00390000010780 ENSGT00940000161539 #21 ENSGT00390000004796 #22 ENSGT00390000016767 #23 ENSGT00950000183078.b.b #24 ENSGT00400000022306 #25 ENSGT00940000162586 #26 ENSGT00940000162734 Muroidea_A ANCESTRAL SPECIES 21 ENSGT00940000156428 #8 ENSGT00800000124190 #9 ENSGT00390000008206 #10 ENSGT00940000156664 #11 ENSGT00950000183160.B #12 ENSGT00940000154764 #13 ENSGT00550000075141 #14 ENSGT00390000016776 #15 ENSGT00940000156599 #16 ENSGT00940000160709 #17 ENSGT00390000012041 #18 ENSGT01020000230351.A #19 ENSGT00390000010194 #20 ENSGT00390000010780 ENSGT00940000161539 #21 ENSGT00390000004796 #22 ENSGT00390000016767 #23 ENSGT00950000183078.b.b #24 ENSGT00400000022306 #25 ENSGT00940000162586 #26 ENSGT00940000162734 Murinae ANCESTRAL SPECIES 20 ENSGT00940000156428 #8 ENSGT00800000124190 #9 ENSGT00390000008206 #10 ENSGT00940000156664 #11 ENSGT00950000183160.B #12 ENSGT00940000154764 #13 ENSGT00550000075141 #14 ENSGT00390000016776 #15 ENSGT00940000156599 #16 ENSGT00940000160709 #17 ENSGT00390000012041 #18 ENSGT01020000230351.A #19 ENSGT00390000010194 #20 ENSGT00940000161539 #21 ENSGT00390000010780 ENSGT00390000004796 #22 ENSGT00390000016767 #23 ENSGT00950000183078.b.b #24 ENSGT00400000022306 #25 ENSGT00940000162586 #26 ENSGT00390000001397 #27 ENSGT00940000161625 #28 ENSGT00940000153805.q.b.a.a.a.b.b.b.a.a #30 Mus ANCESTRAL SPECIES 17 ENSGT00940000156428 #8 ENSGT00800000124190 #9 ENSGT00390000008206 #10 ENSGT00940000156664 #11 ENSGT00950000183160.B #12 ENSGT00940000154764 #13 ENSGT00550000075141 #14 ENSGT00390000016776 #15 ENSGT00940000156599 #16 ENSGT00940000160709 #17 ENSGT00390000012041 #18 ENSGT01020000230351.A #19 ENSGT00390000010194 #20 ENSGT00390000010780 ENSGT00940000161539 #21 ENSGT00390000004796 #22 ENSGT00390000016767 #23 ENSGT00950000183078.b.b #24 ENSGT00400000022306 #25 ENSGT00940000162586 #26 ENSGT00390000001397 #27 ENSGT00940000161625 #28 ENSGT00940000153805.q.b.a.a.a.b.b.b.a.a #30 Mus_A ANCESTRAL SPECIES 6 ENSGT00940000156428 #8 ENSGT00800000124190 #9 ENSGT00390000008206 #10 ENSGT00940000156664 #11 ENSGT00950000183160.B #12 ENSGT00940000154764 #13 ENSGT00550000075141 #14 ENSGT00390000016776 #15 ENSGT00940000156599 #16 ENSGT00940000160709 #17 ENSGT00390000012041 #18 ENSGT01020000230351.A #19 ENSGT00390000010194 #20 ENSGT00390000010780 ENSGT00940000161539 #21 ENSGT00390000004796 #22 ENSGT00390000016767 #23 ENSGT00950000183078.b.b #24 ENSGT00400000022306 #25 ENSGT00940000162586 #26 ENSGT00390000001397 #27 ENSGT00940000161625 #28 ENSGT00940000153805.q.b.a.a.a.b.b.b.a.a #30 ENSGT00950000183069.b.b.a.b.c.a.b.b.e.a.a.a.a.b.b ENSGT00940000160999 ENSGT00740000115581.f ENSGT00940000156736 ENSGT01100000263544.c.a.a.b ENSGT00390000015494 ENSGT00940000159492 ENSGT00390000015667 Mus_B ANCESTRAL SPECIES 4 ENSGT00940000156428 #8 ENSGT00800000124190 #9 ENSGT00390000008206 #10 ENSGT00940000156664 #11 ENSGT00950000183160.B #12 ENSGT00940000154764 #13 ENSGT00550000075141 #14 ENSGT00390000016776 #15 ENSGT00940000156599 #16 ENSGT00940000160709 #17 ENSGT00390000012041 #18 ENSGT01020000230351.A #19 ENSGT00390000010194 #20 ENSGT00390000010780 ENSGT00940000161539 #21 ENSGT00390000004796 #22 ENSGT00390000016767 #23 ENSGT00950000183078.b.b #24 ENSGT00400000022306 #25 ENSGT00940000162586 #26 ENSGT00390000001397 #27 ENSGT00940000161625 #28 ENSGT00940000153805.q.b.a.a.a.b.b.b.a.a.b #36 ENSGT00510000049974 #37 ENSGT00950000183069.b.b.a.b.c.a.b.b.e.a.a.a.a.b.b.a.a ENSGT00940000160999 ENSGT00740000115581.f ENSGT00940000156736 ENSGT01100000263544.c.a.a.b ENSGT00390000015494 ENSGT00940000159492 Mouse MODERN SPECIES 14 Pitpnb (ENSMUSG00000050017) #7 Ttc28 (ENSMUSG00000033209) #8 Chek2 (ENSMUSG00000029521) #9 Hscb (ENSMUSG00000043510) #10 Ulk1 (ENSMUSG00000029512) #11 Pus1 (ENSMUSG00000029507) #12 Ep400 (ENSMUSG00000029505) #13 Ddx51 (ENSMUSG00000029504) #14 Noc4l (ENSMUSG00000033294) #15 Galnt9 (ENSMUSG00000033316) #16 Fbrsl1 (ENSMUSG00000043323) #17 Lrcol1 (ENSMUSG00000072754) #18 P2rx2 (ENSMUSG00000029503) #19 Pole (ENSMUSG00000007080) #20 Pxmp2 (ENSMUSG00000029499) #21 Pgam5 (ENSMUSG00000029500) #22 Ankle2 (ENSMUSG00000029501) #23 Golga3 (ENSMUSG00000029502) #24 Chfr (ENSMUSG00000014668) #25 Zfp605 (ENSMUSG00000023284) #26 Gtpbp6 (ENSMUSG00000033434) #27 Plcxd1 (ENSMUSG00000064247) #28 Gm35315 (ENSMUSG00000109771) #29 Gm17655 (ENSMUSG00000090963) #30 Zfp932 (ENSMUSG00000066613) #31 ENSMUSG00000121597 #32 Gm15446 (ENSMUSG00000090015) #33 ENSMUSG00000121596 #34 4930522L14Rik (ENSMUSG00000072762) #35 5430403G16Rik (ENSMUSG00000072763) #36 Crlf2 (ENSMUSG00000033467) #37 Mus_C ANCESTRAL SPECIES 4 ENSGT00940000156428 #8 ENSGT00800000124190 #9 ENSGT00390000008206 #10 ENSGT00940000156664 #11 ENSGT00950000183160.B #12 ENSGT00940000154764 #13 ENSGT00550000075141 #14 ENSGT00390000016776 #15 ENSGT00940000156599 #16 ENSGT00940000160709 #17 ENSGT00390000012041 #18 ENSGT01020000230351.A #19 ENSGT00390000010194 #20 ENSGT00390000010780 ENSGT00940000161539 #21 ENSGT00390000004796 #22 ENSGT00390000016767 #23 ENSGT00950000183078.b.b #24 ENSGT00400000022306 #25 ENSGT00940000162586 #26 ENSGT00390000001397 #27 ENSGT00940000161625 #28 ENSGT00940000153805.q.b.a.a.a.b.b.b.a.a.b #36 ENSGT00510000049974 #37 ENSGT00950000183069.b.b.a.b.c.a.b.b.e.a.a.a.a.b.b.a.a ENSGT00940000160999 ENSGT00740000115581.f ENSGT00940000156736 ENSGT01100000263544.c.a.a.b ENSGT00390000015494 ENSGT00940000159492 Steppe mouse MODERN SPECIES 3377 Ttc28 (ENSMSIG00000005399) #8 Chek2 (ENSMSIG00000005285) #9 Hscb (ENSMSIG00000005268) #10 Ulk1 (ENSMSIG00000005151) #11 Pus1 (ENSMSIG00000004926) #12 Ep400 (ENSMSIG00000004329) #13 Ddx51 (ENSMSIG00000004203) #14 Noc4l (ENSMSIG00000004144) #15 Galnt9 (ENSMSIG00000004070) #16 Fbrsl1 (ENSMSIG00000003847) #17 Lrcol1 (ENSMSIG00000003802) #18 P2rx2 (ENSMSIG00000003513) #19 Pole (ENSMSIG00000003276) #20 ENSMSIG00000003244 Pxmp2 (ENSMSIG00000003224) #21 Pgam5 (ENSMSIG00000003160) #22 Ankle2 (ENSMSIG00000003085) #23 Golga3 (ENSMSIG00000003024) #24 Chfr (ENSMSIG00000002729) #25 Zfp605 (ENSMSIG00000002673) #26 Gtpbp6 (ENSMSIG00000002618) #27 Plcxd1 (ENSMSIG00000002577) #28 Gm35315 (ENSMSIG00000002546) #29 Gm17655 (ENSMSIG00000002508) #30 spretus MODERN SPECIES 14 Pitpnb (MGP_SPRETEiJ_G0028554) #7 Ttc28 (MGP_SPRETEiJ_G0028553) #8 Chek2 (MGP_SPRETEiJ_G0028552) #9 Hscb (MGP_SPRETEiJ_G0028551) #10 Ulk1 (MGP_SPRETEiJ_G0028550) #11 Pus1 (MGP_SPRETEiJ_G0028549) #12 Ep400 (MGP_SPRETEiJ_G0028548) #13 Ddx51 (MGP_SPRETEiJ_G0028547) #14 Noc4l (MGP_SPRETEiJ_G0028546) #15 Galnt9 (MGP_SPRETEiJ_G0028545) #16 Fbrsl1 (MGP_SPRETEiJ_G0028544) #17 Lrcol1 (MGP_SPRETEiJ_G0028543) #18 P2rx2 (MGP_SPRETEiJ_G0028542) #19 Pole (MGP_SPRETEiJ_G0028541) #20 Pxmp2 (MGP_SPRETEiJ_G0028540) #21 Pgam5 (MGP_SPRETEiJ_G0028539) #22 Ankle2 (MGP_SPRETEiJ_G0028538) #23 Golga3 (MGP_SPRETEiJ_G0028537) #24 Chfr (MGP_SPRETEiJ_G0028536) #25 Zfp605 (MGP_SPRETEiJ_G0028535) #26 Gtpbp6 (MGP_SPRETEiJ_G0028534) #27 Plcxd1 (MGP_SPRETEiJ_G0028533) #28 MGP_SPRETEiJ_G0028532 #36 Crlf2 (MGP_SPRETEiJ_G0028531) #37 Vmn2r16 (MGP_SPRETEiJ_G0028530) Tmed11 (MGP_SPRETEiJ_G0028529) MGP_SPRETEiJ_G0028528 Fgfrl1 (MGP_SPRETEiJ_G0028527) Slc26a1 (MGP_SPRETEiJ_G0028526) Idua (MGP_SPRETEiJ_G0028525) Dgkq (MGP_SPRETEiJ_G0028524) Ryukyu mouse MODERN SPECIES 14 Pitpnb (MGP_CAROLIEiJ_G0027556) #7 Ttc28 (MGP_CAROLIEiJ_G0027555) #8 Chek2 (MGP_CAROLIEiJ_G0027554) #9 Hscb (MGP_CAROLIEiJ_G0027553) #10 Ulk1 (MGP_CAROLIEiJ_G0027552) #11 Pus1 (MGP_CAROLIEiJ_G0027551) #12 Ep400 (MGP_CAROLIEiJ_G0027550) #13 Ddx51 (MGP_CAROLIEiJ_G0027549) #14 Noc4l (MGP_CAROLIEiJ_G0027548) #15 Galnt9 (MGP_CAROLIEiJ_G0027547) #16 Fbrsl1 (MGP_CAROLIEiJ_G0027546) #17 Lrcol1 (MGP_CAROLIEiJ_G0027545) #18 P2rx2 (MGP_CAROLIEiJ_G0027544) #19 Pole (MGP_CAROLIEiJ_G0027543) #20 Pxmp2 (MGP_CAROLIEiJ_G0027542) #21 Pgam5 (MGP_CAROLIEiJ_G0027541) #22 Ankle2 (MGP_CAROLIEiJ_G0027540) #23 Golga3 (MGP_CAROLIEiJ_G0027539) #24 Chfr (MGP_CAROLIEiJ_G0027538) #25 MGP_CAROLIEiJ_G0027537 #26 Gtpbp6 (MGP_CAROLIEiJ_G0027536) #27 MGP_CAROLIEiJ_G0027535 #28 MGP_CAROLIEiJ_G0027534 MGP_CAROLIEiJ_G0027533 MGP_CAROLIEiJ_G0027532 MGP_CAROLIEiJ_G0027531 Tmed11 (MGP_CAROLIEiJ_G0027530) MGP_CAROLIEiJ_G0027529 Fgfrl1 (MGP_CAROLIEiJ_G0027528) Slc26a1 (MGP_CAROLIEiJ_G0027527) Idua (MGP_CAROLIEiJ_G0027526) Shrew mouse MODERN SPECIES 15 Pitpnb (MGP_PahariEiJ_G0024138) #7 Ttc28 (MGP_PahariEiJ_G0024137) #8 Chek2 (MGP_PahariEiJ_G0024136) #9 Hscb (MGP_PahariEiJ_G0024135) #10 Ulk1 (MGP_PahariEiJ_G0024134) #11 Pus1 (MGP_PahariEiJ_G0024133) #12 Ep400 (MGP_PahariEiJ_G0024132) #13 Ddx51 (MGP_PahariEiJ_G0024131) #14 Noc4l (MGP_PahariEiJ_G0024130) #15 Galnt9 (MGP_PahariEiJ_G0024129) #16 Fbrsl1 (MGP_PahariEiJ_G0024128) #17 Lrcol1 (MGP_PahariEiJ_G0024127) #18 P2rx2 (MGP_PahariEiJ_G0024126) #19 Pole (MGP_PahariEiJ_G0024125) #20 Pxmp2 (MGP_PahariEiJ_G0024124) #21 Pgam5 (MGP_PahariEiJ_G0024123) #22 Ankle2 (MGP_PahariEiJ_G0024122) #23 Golga3 (MGP_PahariEiJ_G0024121) #24 Chfr (MGP_PahariEiJ_G0024120) #25 Rat MODERN SPECIES 3 Chek2 (ENSRNOG00000037509) #9 Hscb (ENSRNOG00000037508) #10 Ulk1 (ENSRNOG00000037505) #11 Pus1 (ENSRNOG00000037500) #12 Ep400 (ENSRNOG00000037483) #13 LOC100362927 (ENSRNOG00000037481) Ddx51 (ENSRNOG00000037480) #14 Noc4l (ENSRNOG00000037478) #15 Galnt9 (ENSRNOG00000037476) #16 Fbrsl1 (ENSRNOG00000030721) #17 Lrcol1 (ENSRNOG00000037466) #18 P2rx2 (ENSRNOG00000037456) #19 Pole (ENSRNOG00000037449) #20 Pxmp2 (ENSRNOG00000037446) #21 ENSRNOG00000068194 Pgam5 (ENSRNOG00000037443) #22 Ankle2 (ENSRNOG00000060144) #23 Golga3 (ENSRNOG00000037437) #24 Chfr (ENSRNOG00000037430) #25 Zfp605 (ENSRNOG00000037428) #26 ENSRNOG00000066204 Gtpbp6 (ENSRNOG00000062521) #27 Plcxd1 (ENSRNOG00000049866) #28 Zfp958 (ENSRNOG00000030410) #30 Cricetidae ANCESTRAL SPECIES 20 ENSGT00940000156428 #8 ENSGT00800000124190 #9 ENSGT00390000008206 #10 ENSGT00940000156664 #11 ENSGT00950000183160.B #12 ENSGT00940000154764 #13 ENSGT00550000075141 #14 ENSGT00390000016776 #15 ENSGT00940000156599 #16 ENSGT00940000160709 #17 ENSGT00390000012041 #18 ENSGT01020000230351.A #19 ENSGT00390000010194 #20 ENSGT00390000010780 ENSGT00940000161539 #21 ENSGT00390000004796 #22 ENSGT00390000016767 #23 ENSGT00950000183078.b.b #24 ENSGT00400000022306 #25 ENSGT00940000162586 #26 ENSGT00940000162734 Cricetinae ANCESTRAL SPECIES 19 ENSGT00940000155101 #7 ENSGT00940000156428 #8 ENSGT00800000124190 #9 ENSGT00390000008206 #10 ENSGT00940000156664 #11 ENSGT00950000183160.B #12 ENSGT00940000154764 #13 ENSGT00550000075141 #14 ENSGT00390000016776 #15 ENSGT00940000156599 #16 ENSGT00940000160709 #17 ENSGT00390000012041 #18 ENSGT01020000230351.A #19 ENSGT00390000010194 #20 ENSGT00940000161539 #21 ENSGT00390000004796 #22 ENSGT00390000016767 #23 ENSGT00950000183078.b.b #24 ENSGT00400000022306 #25 ENSGT00940000162586 #26 ENSGT00940000162734 ENSGT01030000234515.a.b.b ENSGT01010000222539 ENSGT00940000155528 ENSGT00390000000051 ENSGT00940000154412.C ENSGT00390000017407 ENSGT00940000158914 ENSGT00940000159311.c ENSGT00940000154382.a.a ENSGT00940000153846.a.b Chinese hamster chok1gshd MODERN SPECIES 130 Ttc28 (ENSCGRG00001021411) #8 Chek2 (ENSCGRG00001000569) #9 ENSCGRG00001023913 Hscb (ENSCGRG00001005748) #10 Ulk1 (ENSCGRG00001020729) #11 Pus1 (ENSCGRG00001019592) #12 Ep400 (ENSCGRG00001013148) #13 Ddx51 (ENSCGRG00001007401) #14 Noc4l (ENSCGRG00001004291) #15 Galnt9 (ENSCGRG00001017127) #16 Fbrsl1 (ENSCGRG00001017064) #17 Lrcol1 (ENSCGRG00001024930) #18 P2rx2 (ENSCGRG00001020311) #19 Pole (ENSCGRG00001009740) #20 Pxmp2 (ENSCGRG00001020745) #21 Pgam5 (ENSCGRG00001023531) #22 Ankle2 (ENSCGRG00001015292) #23 Golga3 (ENSCGRG00001024610) #24 Chfr (ENSCGRG00001021486) #25 Zfp605 (ENSCGRG00001025071) #26 ENSCGRG00001013619 ENSCGRG00001023214 ##31 ENSCGRG00001000880 ENSCGRG00001017924 ENSCGRG00001022971 Elavl1 (ENSCGRG00001013676) Timm44 (ENSCGRG00001023723) Ctxn1 (ENSCGRG00001000838) Snapc2 (ENSCGRG00001006223) Map2k7 (ENSCGRG00001018547) Lrrc8e (ENSCGRG00001024603) Golden Hamster MODERN SPECIES 804 Chek2 (ENSMAUG00000009828) #9 Hscb (ENSMAUG00000009038) #10 Ulk1 (ENSMAUG00000004257) #11 Pus1 (ENSMAUG00000001482) #12 Ep400 (ENSMAUG00000014324) #13 Ddx51 (ENSMAUG00000012100) #14 Noc4l (ENSMAUG00000018153) #15 Galnt9 (ENSMAUG00000015583) #16 Fbrsl1 (ENSMAUG00000020661) #17 Lrcol1 (ENSMAUG00000021578) #18 P2rx2 (ENSMAUG00000011915) #19 ENSMAUG00000000910 #20 ENSMAUG00000018639 #20 ENSMAUG00000020143 #20 Pxmp2 (ENSMAUG00000012927) #21 Pgam5 (ENSMAUG00000008878) #22 Ankle2 (ENSMAUG00000020311) #23 Golga3 (ENSMAUG00000017308) #24 Chfr (ENSMAUG00000018146) #25 ENSMAUG00000003676 ENSMAUG00000019276 ENSMAUG00000013889 Cers4 (ENSMAUG00000020952) ENSMAUG00000012972 Elavl1 (ENSMAUG00000000924) Timm44 (ENSMAUG00000019937) Ctxn1 (ENSMAUG00000000773) Snapc2 (ENSMAUG00000015015) Map2k7 (ENSMAUG00000003663) Lrrc8e (ENSMAUG00000016048) Prr36 (ENSMAUG00000001714) Cricetidae_B ANCESTRAL SPECIES 19 ENSGT00940000156428 #8 ENSGT00800000124190 #9 ENSGT00390000008206 #10 ENSGT00940000156664 #11 ENSGT00950000183160.B #12 ENSGT00940000154764 #13 ENSGT00550000075141 #14 ENSGT00390000016776 #15 ENSGT00940000156599 #16 ENSGT00940000160709 #17 ENSGT00390000012041 #18 ENSGT01020000230351.A #19 ENSGT00390000010194 #20 ENSGT00390000010780 ENSGT00940000161539 #21 ENSGT00390000004796 #22 ENSGT00390000016767 #23 ENSGT00950000183078.b.b #24 ENSGT00400000022306 #25 ENSGT00940000162734 Northern American deer mouse MODERN SPECIES 15 Ttc28 (ENSPEMG00000018631) #8 Chek2 (ENSPEMG00000012801) #9 Hscb (ENSPEMG00000012692) #10 Ulk1 (ENSPEMG00000010074) #11 Pus1 (ENSPEMG00000013448) #12 Ep400 (ENSPEMG00000011820) #13 Ddx51 (ENSPEMG00000019176) #14 Noc4l (ENSPEMG00000011021) #15 Galnt9 (ENSPEMG00000018143) #16 Fbrsl1 (ENSPEMG00000009091) #17 Lrcol1 (ENSPEMG00000024446) #18 P2rx2 (ENSPEMG00000011687) #19 Pole (ENSPEMG00000019269) #20 ENSPEMG00000024967 Pxmp2 (ENSPEMG00000015512) #21 Pgam5 (ENSPEMG00000019076) #22 Ankle2 (ENSPEMG00000000550) #23 ENSPEMG00000009868 Golga3 (ENSPEMG00000018222) #24 Chfr (ENSPEMG00000012566) #25 ENSPEMG00000016162 Prairie vole MODERN SPECIES 7 ENSMOCG00000007822 Erp29 (ENSMOCG00000013561) Naa25 (ENSMOCG00000017243) ENSMOCG00000013800 Hectd4 (ENSMOCG00000000572) ENSMOCG00000015858 Ptpn11 (ENSMOCG00000017604) Rph3a (ENSMOCG00000019903) ENSMOCG00000014860 Galnt9 (ENSMOCG00000011083) #16 Fbrsl1 (ENSMOCG00000020234) #17 Lrcol1 (ENSMOCG00000007334) #18 P2rx2 (ENSMOCG00000013202) #19 Pole (ENSMOCG00000021483) #20 Pxmp2 (ENSMOCG00000014970) #21 Pgam5 (ENSMOCG00000018637) #22 Ankle2 (ENSMOCG00000016542) #23 ENSMOCG00000006544 Golga3 (ENSMOCG00000013554) #24 Chfr (ENSMOCG00000018701) #25 ENSMOCG00000021337 ##29 ENSMOCG00000001664 Slc15a4 (ENSMOCG00000009498) Glt1d1 (ENSMOCG00000012826) Tmem132d (ENSMOCG00000019097) Fzd10 (ENSMOCG00000007918) Piwil1 (ENSMOCG00000015999) Rimbp2 (ENSMOCG00000005039) Stx2 (ENSMOCG00000006885) ENSMOCG00000014611 Adgrd1 (ENSMOCG00000001662) Upper Galilee mountains blind mole rat MODERN SPECIES 1669 Stx2 (ENSNGAG00000017463) Ran (ENSNGAG00000012188) Adgrd1 (ENSNGAG00000020745) Sfswap (ENSNGAG00000018167) Mmp17 (ENSNGAG00000014099) Ulk1 (ENSNGAG00000007610) #11 Pus1 (ENSNGAG00000012976) #12 Ep400 (ENSNGAG00000019530) #13 Ddx51 (ENSNGAG00000020870) #14 Noc4l (ENSNGAG00000002758) #15 Galnt9 (ENSNGAG00000020491) #16 ENSNGAG00000018393 #17 Lrcol1 (ENSNGAG00000001066) #18 P2rx2 (ENSNGAG00000000314) #19 Pole (ENSNGAG00000018022) #20 Pgam5 (ENSNGAG00000007440) #22 Ankle2 (ENSNGAG00000017869) #23 Golga3 (ENSNGAG00000017749) #24 Lesser Egyptian jerboa MODERN SPECIES 162 Mmp17 (ENSJJAG00000010485) Ulk1 (ENSJJAG00000016623) #11 Pus1 (ENSJJAG00000000088) #12 Ep400 (ENSJJAG00000016406) #13 ENSJJAG00000012370 ENSJJAG00000019589 #14 Noc4l (ENSJJAG00000020377) #15 Galnt9 (ENSJJAG00000022977) #16 ENSJJAG00000019634 Fbrsl1 (ENSJJAG00000022073) #17 ENSJJAG00000023325 #18 P2rx2 (ENSJJAG00000001951) #19 Pole (ENSJJAG00000000390) #20 Pxmp2 (ENSJJAG00000018159) #21 ENSJJAG00000018223 ENSJJAG00000018630 #22 Ankle2 (ENSJJAG00000018869) #23 Golga3 (ENSJJAG00000017794) #24 Chfr (ENSJJAG00000021405) #25 Kangaroo rat MODERN SPECIES 385 Rimbp2 (ENSDORG00000024138) Stx2 (ENSDORG00000015510) ENSDORG00000028664 Adgrd1 (ENSDORG00000010600) Sfswap (ENSDORG00000010352) Mmp17 (ENSDORG00000010941) Ulk1 (ENSDORG00000011456) #11 Pus1 (ENSDORG00000011455) #12 Ep400 (ENSDORG00000015149) #13 ENSDORG00000015154 #14 Noc4l (ENSDORG00000015155) #15 ENSDORG00000029234 #16 Fbrsl1 (ENSDORG00000028367) #17 Pole (ENSDORG00000001645) #20 Pxmp2 (ENSDORG00000001646) #21 ENSDORG00000023642 #22 Ankle2 (ENSDORG00000005939) #23 Golga3 (ENSDORG00000013207) #24 Chfr (ENSDORG00000008352) #25 ENSDORG00000029514 Rodentia_A ANCESTRAL SPECIES 19 ENSGT00940000153892.B ENSGT00940000158699 ENSGT00940000156664 #11 ENSGT00950000183160.B #12 ENSGT00940000154764 #13 ENSGT00550000075141 #14 ENSGT00390000016776 #15 ENSGT00940000156599 #16 ENSGT00440000037606.a ENSGT00940000160709 #17 ENSGT00390000012041 #18 ENSGT01020000230351.A #19 ENSGT00390000010194 #20 ENSGT00390000010780 ENSGT00940000161539 #21 ENSGT00390000004796 #22 ENSGT00390000016767 #23 ENSGT00950000183078.b.b #24 ENSGT00400000022306 #25 ENSGT00940000162586 #26 ENSGT00940000162734 ENSGT00940000162931 ENSGT00940000163022 ENSGT00940000164587 ENSGT00940000162949 ENSGT00940000163459 Sciuridae ANCESTRAL SPECIES 24 ENSGT00940000153892.B ENSGT00940000158699 ENSGT00940000156664 #11 ENSGT00950000183160.B #12 ENSGT00940000154764 #13 ENSGT00550000075141 #14 ENSGT00390000016776 #15 ENSGT00940000156599 #16 ENSGT00440000037606.a ENSGT00940000160709 #17 ENSGT00390000012041 #18 ENSGT01020000230351.A #19 ENSGT00390000010194 #20 ENSGT00390000010780 ENSGT00940000161539 #21 ENSGT00390000004796 #22 ENSGT00390000016767 #23 ENSGT00950000183078.b.b #24 ENSGT00400000022306 #25 ENSGT00940000162586 #26 ENSGT00940000162734 ENSGT00940000162931 ENSGT00940000163022 ENSGT00940000164587 ENSGT00940000162949 ENSGT00940000163459 Eurasian red squirrel DUPLICATION Eurasian red squirrel MODERN SPECIES 17 SFSWAP (ENSSVLG00005008029) MMP17 (ENSSVLG00005008065) ULK1 (ENSSVLG00005008151) #11 PUS1 (ENSSVLG00005008191) #12 EP400 (ENSSVLG00005008295) #13 ENSSVLG00005008621 #14 NOC4L (ENSSVLG00005008643) #15 GALNT9 (ENSSVLG00005008678) #16 ENSSVLG00005008750 #17 ENSSVLG00005008787 #17 LRCOL1 (ENSSVLG00005008931) #18 P2RX2 (ENSSVLG00005009075) #19 POLE (ENSSVLG00005009649) #20 ENSSVLG00005010247 ENSSVLG00005010278 ENSSVLG00005010299 #22 ANKLE2 (ENSSVLG00005010357) #23 ENSSVLG00005010516 CHFR (ENSSVLG00005011106) #25 ZNF605 (ENSSVLG00005011906) #26 ZNF26 (ENSSVLG00005012007) ZNF84 (ENSSVLG00005012118) ZNF140 (ENSSVLG00005012233) ENSSVLG00005012296 ENSSVLG00005012354 ZNF268 (ENSSVLG00005012543) Eurasian red squirrel MODERN SPECIES 14 ERC1 (ENSSVLG00005007077) ENSSVLG00005006986 ENSSVLG00005006970 RAD52 (ENSSVLG00005006938) NINJ2 (ENSSVLG00005023348) ENSSVLG00005023312 B4GALNT3 (ENSSVLG00005023223) ENSSVLG00005023159 KDM5A (ENSSVLG00005023072) ENSSVLG00005022982 ENSSVLG00005022806 SLC6A12 (ENSSVLG00005022674) IQSEC3 (ENSSVLG00005022458) ENSSVLG00005022363 DDX11 (ENSSVLG00005022284) ENSSVLG00005022228 #22 IL17RA (ENSSVLG00005022045) TMEM121B (ENSSVLG00005021991) HDHD5 (ENSSVLG00005021890) ADA2 (ENSSVLG00005021814) ENSSVLG00005021751 CECR2 (ENSSVLG00005021410) SLC25A18 (ENSSVLG00005021313) ENSSVLG00005021046 ENSSVLG00005021002 BCL2L13 (ENSSVLG00005020832) BID (ENSSVLG00005020750) ENSSVLG00005020690 PEX26 (ENSSVLG00005020583) USP18 (ENSSVLG00005020464) ENSSVLG00005020327 Marmotini ANCESTRAL SPECIES 87 ENSGT00940000153892.B ENSGT00940000158699 ENSGT00940000156664 #11 ENSGT00950000183160.B #12 ENSGT00940000154764 #13 ENSGT00550000075141 #14 ENSGT00390000016776 #15 ENSGT00940000156599 #16 ENSGT00440000037606.a ENSGT00940000160709 #17 ENSGT00390000012041 #18 ENSGT01020000230351.A #19 ENSGT00390000010194 #20 ENSGT00390000010780 ENSGT00940000161539 #21 ENSGT00390000004796 #22 ENSGT00390000016767 #23 ENSGT00950000183078.b.b #24 ENSGT00400000022306 #25 ENSGT00940000162586 #26 ENSGT00940000162734 ENSGT00940000162931 ENSGT00940000163022 ENSGT00940000162949.a ENSGT00940000153307.d.b.f ENSGT00940000162558.l ENSGT00940000153120.k.a.a.eb.a.a ENSGT00940000162558.k.a.b Alpin marmot MODERN SPECIES 105 STX2 (ENSMMMG00000005244) ENSMMMG00000005232 ADGRD1 (ENSMMMG00000005122) SFSWAP (ENSMMMG00000005074) ULK1 (ENSMMMG00000005012) #11 PUS1 (ENSMMMG00000004922) #12 ENSMMMG00000004877 #13 ENSMMMG00000004819 #13 DDX51 (ENSMMMG00000004784) #14 NOC4L (ENSMMMG00000004756) #15 GALNT9 (ENSMMMG00000004734) #16 ENSMMMG00000004726 POLE (ENSMMMG00000004659) #20 ENSMMMG00000004647 PXMP2 (ENSMMMG00000004639) #21 ENSMMMG00000004629 #22 ANKLE2 (ENSMMMG00000004532) #23 GOLGA3 (ENSMMMG00000004468) #24 CHFR (ENSMMMG00000004363) #25 ZNF605 (ENSMMMG00000004339) #26 ZNF26 (ENSMMMG00000004328) ZNF84 (ENSMMMG00000004319) ENSMMMG00000004313 ENSMMMG00000004303 ENSMMMG00000004287 ENSMMMG00000004285 ENSMMMG00000004279 ENSMMMG00000004271 ENSMMMG00000004268 ENSMMMG00000004260 Marmotini_b ANCESTRAL SPECIES 135 ENSGT00940000153892.B ENSGT00940000158699 ENSGT00940000156664 #11 ENSGT00950000183160.B #12 ENSGT00940000154764 #13 ENSGT00550000075141 #14 ENSGT00390000016776 #15 ENSGT00940000156599 #16 ENSGT00440000037606.a ENSGT00940000160709 #17 ENSGT00390000012041 #18 ENSGT01020000230351.A #19 ENSGT00390000010194 #20 ENSGT00940000161539 #21 ENSGT00390000010780 ENSGT00390000004796 #22 ENSGT00390000016767 #23 ENSGT00950000183078.b.b #24 ENSGT00400000022306 #25 ENSGT00940000162586 #26 ENSGT00940000162734 ENSGT00940000162931 ENSGT00940000163022 ENSGT00940000162949.a ENSGT00940000153307.d.b.e.b ENSGT00940000162558.l ENSGT00940000153120.k.a.a.eb.a.a ENSGT00940000162558.k.a.b Squirrel MODERN SPECIES 260 ADGRD1 (ENSSTOG00000004009) SFSWAP (ENSSTOG00000000773) MMP17 (ENSSTOG00000004804) ULK1 (ENSSTOG00000011200) #11 PUS1 (ENSSTOG00000011245) #12 EP400 (ENSSTOG00000011461) #13 DDX51 (ENSSTOG00000023762) #14 NOC4L (ENSSTOG00000022612) #15 ENSSTOG00000029271 #16 ENSSTOG00000007820 #16 ENSSTOG00000034937 ENSSTOG00000025107 #17 P2RX2 (ENSSTOG00000022177) #19 POLE (ENSSTOG00000022311) #20 PXMP2 (ENSSTOG00000010249) #21 ENSSTOG00000015961 #22 ANKLE2 (ENSSTOG00000015964) #23 GOLGA3 (ENSSTOG00000006703) #24 CHFR (ENSSTOG00000020343) #25 ZNF605 (ENSSTOG00000031499) #26 ZNF26 (ENSSTOG00000008431) ZNF84 (ENSSTOG00000031351) ZNF140 (ENSSTOG00000014531) ENSSTOG00000007703 ENSSTOG00000023799 ENSSTOG00000022140 ENSSTOG00000027577 Hystricomorpha ANCESTRAL SPECIES ENSGT00940000153892.B ENSGT00940000158699 ENSGT00940000156664 #11 ENSGT00950000183160.B #12 ENSGT00940000154764 #13 ENSGT00550000075141 #14 ENSGT00390000016776 #15 ENSGT00940000156599 #16 ENSGT00440000037606.a ENSGT00940000160709 #17 ENSGT00390000012041 #18 ENSGT01020000230351.A #19 ENSGT00390000010194 #20 ENSGT00390000010780 ENSGT00940000161539 #21 ENSGT00390000004796 #22 ENSGT00390000016767 #23 ENSGT00950000183078.b.b #24 ENSGT00400000022306 #25 ENSGT00940000162586 #26 ENSGT00940000162734 ENSGT00940000162931 ENSGT00940000163022 ENSGT00940000164587 ENSGT00940000162949 ENSGT00960000192142 Naked mole-rat female MODERN SPECIES 15 ENSHGLG00000011721 ENSHGLG00000045897 PUS1 (ENSHGLG00000016086) #12 ENSHGLG00000040557 ENSHGLG00000048765 #13 ENSHGLG00000040714 #13 ENSHGLG00000041416 #14 ENSHGLG00000040511 #16 ENSHGLG00000048094 #16 ENSHGLG00000032742 ENSHGLG00000041641 #17 ENSHGLG00000010386 #19 ENSHGLG00000042063 #20 ENSHGLG00000014969 ENSHGLG00000036084 #21 PGAM5 (ENSHGLG00000017212) #22 ANKLE2 (ENSHGLG00000019557) #23 CHFR (ENSHGLG00000015975) #25 ZNF605 (ENSHGLG00000011502) #26 ZNF26 (ENSHGLG00000043625) ZNF84 (ENSHGLG00000040959) ZNF140 (ENSHGLG00000014521) ENSHGLG00000036236 ENSHGLG00000010270 ENSHGLG00000037781 ENSHGLG00000033665 AHSP (ENSHGLG00000018521) RUSF1 (ENSHGLG00000013080) SLC5A2 (ENSHGLG00000012248) TGFB1I1 (ENSHGLG00000012885) ARMC5 (ENSHGLG00000012066) Hystricomorpha_a ANCESTRAL SPECIES 49 ENSGT00940000153786.e.a.b ENSGT00940000159783.l ENSGT00940000153892.B ENSGT00940000158699 ENSGT00940000156664 #11 ENSGT00950000183160.B #12 ENSGT00940000154764 #13 ENSGT00550000075141 #14 ENSGT00390000016776 #15 ENSGT00940000156599 #16 ENSGT00940000160709 #17 ENSGT00390000012041 #18 ENSGT01020000230351.A #19 ENSGT00390000010194 #20 ENSGT00940000161539 #21 ENSGT00390000004796 #22 ENSGT00390000016767 #23 ENSGT00950000183078.b.b #24 ENSGT00400000022306 #25 ENSGT00940000162586 #26 ENSGT00940000162734 ENSGT00940000162931 ENSGT00940000163022 ENSGT00940000164587 ENSGT00940000162949 Guinea pig MODERN SPECIES 227 ENSCPOG00000001555 #17 LRCOL1 (ENSCPOG00000038864) #18 P2RX2 (ENSCPOG00000013647) #19 POLE (ENSCPOG00000013629) #20 PXMP2 (ENSCPOG00000002891) #21 PGAM5 (ENSCPOG00000033389) #22 ANKLE2 (ENSCPOG00000022672) #23 GOLGA3 (ENSCPOG00000001496) #24 CHFR (ENSCPOG00000013980) #25 ZNF84 (ENSCPOG00000030774) ZNF891 (ENSCPOG00000035408) ZNF10 (ENSCPOG00000039350) Hystricomorpha_b ANCESTRAL SPECIES 51 ENSGT00940000153786.e.a.b ENSGT00940000159783.l ENSGT00940000153892.B ENSGT00940000158699 ENSGT00940000156664 #11 ENSGT00950000183160.B #12 ENSGT00940000154764 #13 ENSGT00550000075141 #14 ENSGT00390000016776 #15 ENSGT00940000156599 #16 ENSGT00940000160709 #17 ENSGT00390000012041 #18 ENSGT01020000230351.A #19 ENSGT00390000010194 #20 ENSGT00940000161539 #21 ENSGT00390000004796 #22 ENSGT00390000016767 #23 ENSGT00950000183078.b.b #24 ENSGT00400000022306 #25 ENSGT00940000162586 #26 ENSGT00940000162734 ENSGT00940000162931 ENSGT00940000163022 ENSGT00940000162949 Long-tailed chinchilla MODERN SPECIES 189 STX2 (ENSCLAG00000010335) ENSCLAG00000011499 ADGRD1 (ENSCLAG00000010222) SFSWAP (ENSCLAG00000008380) MMP17 (ENSCLAG00000010241) ULK1 (ENSCLAG00000010373) #11 PUS1 (ENSCLAG00000011689) #12 EP400 (ENSCLAG00000007936) #13 ENSCLAG00000009231 #14 NOC4L (ENSCLAG00000007550) #15 GALNT9 (ENSCLAG00000017287) #16 LRCOL1 (ENSCLAG00000013428) #18 P2RX2 (ENSCLAG00000009585) #19 POLE (ENSCLAG00000008788) #20 PXMP2 (ENSCLAG00000007105) #21 PGAM5 (ENSCLAG00000015494) #22 ANKLE2 (ENSCLAG00000007163) #23 GOLGA3 (ENSCLAG00000008971) #24 CHFR (ENSCLAG00000010189) #25 ZNF605 (ENSCLAG00000012153) #26 ZNF26 (ENSCLAG00000008681) ZNF84 (ENSCLAG00000008006) ZNF140 (ENSCLAG00000007198) ZNF10 (ENSCLAG00000010332) Degu MODERN SPECIES 117 PIWIL1 (ENSODEG00000010629) RIMBP2 (ENSODEG00000009979) STX2 (ENSODEG00000009934) ENSODEG00000008349 SFSWAP (ENSODEG00000008020) MMP17 (ENSODEG00000008852) ULK1 (ENSODEG00000008683) #11 PUS1 (ENSODEG00000008248) #12 EP400 (ENSODEG00000008132) #13 DDX51 (ENSODEG00000009622) #14 NOC4L (ENSODEG00000007796) #15 GALNT9 (ENSODEG00000007555) #16 ENSODEG00000007770 #17 P2RX2 (ENSODEG00000008787) #19 POLE (ENSODEG00000009651) #20 PGAM5 (ENSODEG00000007602) #22 ANKLE2 (ENSODEG00000009410) #23 GOLGA3 (ENSODEG00000008256) #24 CHFR (ENSODEG00000007635) #25 ZNF84 (ENSODEG00000010801) ZNF10 (ENSODEG00000007783) Lagomorpha ANCESTRAL SPECIES 217 ENSGT01020000230351.A #19 ENSGT00390000010194 #20 ENSGT00940000161539 #21 ENSGT00390000004796 #22 ENSGT00390000016767 #23 ENSGT00950000183078.b.b #24 ENSGT00400000022306 #25 ENSGT00940000162586 #26 ENSGT00940000162734 ENSGT00940000162931 ENSGT00940000162949 ENSGT00960000192142 ENSGT00390000013263 Pika MODERN SPECIES 4448 ENSOPRG00000006327 #22 ANKLE2 (ENSOPRG00000006337) #23 GOLGA3 (ENSOPRG00000006360) #24 Rabbit MODERN SPECIES 537 P2RX2 (ENSOCUG00000017737) #19 POLE (ENSOCUG00000017745) #20 PXMP2 (ENSOCUG00000017769) #21 PGAM5 (ENSOCUG00000027733) #22 ANKLE2 (ENSOCUG00000008406) #23 GOLGA3 (ENSOCUG00000008422) #24 ENSOCUG00000032643 CHFR (ENSOCUG00000014913) #25 ZNF605 (ENSOCUG00000010370) #26 ZNF26 (ENSOCUG00000029684) ZNF84 (ENSOCUG00000000576) ZNF10 (ENSOCUG00000029554) ENSOCUG00000033088 ANHX (ENSOCUG00000024082) ENSOCUG00000022431 ENSOCUG00000032877