Laurasiatheria_c	ANCESTRAL SPECIES	21	ENSGT00940000159783.l	ENSGT00940000153892.B #7	ENSGT00940000158699 #8	ENSGT00940000156664 #9	ENSGT00950000183160.B #10	ENSGT00940000154764 #11	ENSGT00550000075141 #12	ENSGT00390000016776 #13	ENSGT00940000156599 #14	ENSGT00940000160709 #16	ENSGT00390000012041 #17	ENSGT01020000230351.A #18	ENSGT00390000010194 #19	ENSGT00940000161539 #20	ENSGT00390000010780 #21	ENSGT00390000004796 #22	ENSGT00390000016767 #23	ENSGT00950000183078.b.b #24	ENSGT00400000022306 #25	ENSGT00940000162586 #27	ENSGT00940000162734 #28	ENSGT00940000162931	ENSGT00940000163022 #29	ENSGT00940000164587 #30	ENSGT00940000162949 #31	ENSGT00940000163459 #32	ENSGT00960000192142	ENSGT00390000013263 #33
Equus	ANCESTRAL SPECIES	38	ENSGT00940000159783.l	ENSGT00940000153892.B #7	ENSGT00940000158699 #8	ENSGT00940000156664 #9	ENSGT00950000183160.B #10	ENSGT00940000154764 #11	ENSGT00550000075141 #12	ENSGT00390000016776 #13	ENSGT00940000156599 #14	ENSGT00940000160709 #16	ENSGT00390000012041 #17	ENSGT01020000230351.A #18	ENSGT00390000010194 #19	ENSGT00940000161539 #20	ENSGT00390000010780 #21	ENSGT00390000004796 #22	ENSGT00390000016767 #23	ENSGT00950000183078.b.b #24	ENSGT00400000022306 #25	ENSGT00940000162586 #27	ENSGT00940000162734 #28	ENSGT00940000162931	ENSGT00940000163022 #29	ENSGT00940000164587 #30	ENSGT00940000162949 #31	ENSGT00940000163459 #32	ENSGT00390000013263 #33
Donkey	MODERN SPECIES	28	SFSWAP (ENSEASG00005016502) #7	MMP17 (ENSEASG00005016509) #8	ULK1 (ENSEASG00005016522) #9	PUS1 (ENSEASG00005016535) #10	EP400 (ENSEASG00005016567) #11	DDX51 (ENSEASG00005016622) #12	NOC4L (ENSEASG00005016651) #13	GALNT9 (ENSEASG00005016684) #14	ENSEASG00005030426 #15	ENSEASG00005016691 #16	LRCOL1 (ENSEASG00005016695) #17	P2RX2 (ENSEASG00005016698) #18	POLE (ENSEASG00005016705) #19	PXMP2 (ENSEASG00005016716) #20	ENSEASG00005016718 #21	PGAM5 (ENSEASG00005016721) #22	ANKLE2 (ENSEASG00005016723) #23	GOLGA3 (ENSEASG00005016727) #24	CHFR (ENSEASG00005016730) #25	ENSEASG00005029008 #26	ZNF605 (ENSEASG00005024662) #27	ZNF26 (ENSEASG00005016742) #28	ZNF140 (ENSEASG00005016750) #29	ZNF891 (ENSEASG00005027129) #30	ZNF10 (ENSEASG00005036563) #31	ENSEASG00005016761 #32	ENSEASG00005034567 #33	ENSEASG00005027268 #34	ENSEASG00005023841 #35	ENSEASG00005026668 #36	ENSEASG00005036645 #37
Horse	MODERN SPECIES	29	STX2 (ENSECAG00000014615)	RAN (ENSECAG00000020532)	ADGRD1 (ENSECAG00000022202)	SFSWAP (ENSECAG00000007657) #7	MMP17 (ENSECAG00000013201) #8	ULK1 (ENSECAG00000016158) #9	PUS1 (ENSECAG00000006965) #10	EP400 (ENSECAG00000007156) #11	DDX51 (ENSECAG00000018910) #12	NOC4L (ENSECAG00000024217) #13	GALNT9 (ENSECAG00000009252) #14	FBRSL1 (ENSECAG00000015338) #16	LRCOL1 (ENSECAG00000016321) #17	P2RX2 (ENSECAG00000016406) #18	POLE (ENSECAG00000001653) #19	PGAM5 (ENSECAG00000024362) #22	ANKLE2 (ENSECAG00000024483) #23	GOLGA3 (ENSECAG00000010518) #24	CHFR (ENSECAG00000017288) #25	ENSECAG00000054190 #27	ZNF605 (ENSECAG00000023688) #27	ZNF26 (ENSECAG00000005421) #28	ZNF891 (ENSECAG00000012025) #30	ZNF84 (ENSECAG00000008278)	ZNF140 (ENSECAG00000041750) #29	ZNF10 (ENSECAG00000012277) #31	ENSECAG00000053544	ZNF268 (ENSECAG00000012298) #32	ANHX (ENSECAG00000013669) #33	ENSECAG00000058298	ENSECAG00000050486
Chiroptera	ANCESTRAL SPECIES	18	ENSGT00940000159783.l	ENSGT00940000153892.B #7	ENSGT00940000158699 #8	ENSGT00940000156664 #9	ENSGT00950000183160.B #10	ENSGT00940000154764 #11	ENSGT00550000075141 #12	ENSGT00390000016776 #13	ENSGT00940000156599 #14	ENSGT00940000160709 #16	ENSGT00390000012041 #17	ENSGT01020000230351.A #18	ENSGT00390000010194 #19	ENSGT00390000010780 #21	ENSGT00940000161539 #20	ENSGT00390000004796 #22	ENSGT00390000016767 #23	ENSGT00950000183078.b.b #24	ENSGT00400000022306 #25	ENSGT00940000162586 #27	ENSGT00940000162734 #28	ENSGT00940000162931	ENSGT00940000163022 #29	ENSGT00940000164587 #30	ENSGT00940000162949 #31	ENSGT00940000163459 #32	ENSGT00960000192142	ENSGT00390000013263 #33
Megabat	MODERN SPECIES	2484																PGAM5 (ENSPVAG00000011593) #22	ANKLE2 (ENSPVAG00000011595) #23
Microchiroptera	ANCESTRAL SPECIES	9	ENSGT00940000159783.l	ENSGT00940000153892.B #7	ENSGT00940000158699 #8	ENSGT00940000156664 #9	ENSGT00950000183160.B #10	ENSGT00940000154764 #11	ENSGT00550000075141 #12	ENSGT00390000016776 #13	ENSGT00940000156599 #14	ENSGT00940000160709 #16	ENSGT00390000012041 #17	ENSGT01020000230351.A #18	ENSGT00390000010194 #19	ENSGT00390000010780 #21	ENSGT00940000161539 #20	ENSGT00390000004796 #22	ENSGT00390000016767 #23	ENSGT00950000183078.b.b #24	ENSGT00400000022306 #25	ENSGT00940000162586 #27	ENSGT00940000162734 #28	ENSGT00940000162931	ENSGT00940000163022 #29	ENSGT00940000162949 #31	ENSGT00940000163459 #32	ENSGT00960000192142	ENSGT00390000013263 #33
Greater horseshoe bat	MODERN SPECIES	17	SFSWAP (ENSRFEG00010017723) #7	MMP17 (ENSRFEG00010017539) #8	ULK1 (ENSRFEG00010017494) #9	PUS1 (ENSRFEG00010017357) #10	ENSRFEG00010017315 #11	ENSRFEG00010017129 #11	ENSRFEG00010017084 #12	NOC4L (ENSRFEG00010016884) #13	GALNT9 (ENSRFEG00010016787) #14	FBRSL1 (ENSRFEG00010016635) #16	ENSRFEG00010016567 #17	P2RX2 (ENSRFEG00010016540) #18	ENSRFEG00010014253 #19	ENSRFEG00010014185 #21	PXMP2 (ENSRFEG00010014127) #20	PGAM5 (ENSRFEG00010014031) #22	ANKLE2 (ENSRFEG00010013952) #23	GOLGA3 (ENSRFEG00010013878) #24	CHFR (ENSRFEG00010013696) #25	ZNF605 (ENSRFEG00010013661) #27	ZNF26 (ENSRFEG00010013547) #28	ZNF84 (ENSRFEG00010013427)	ZNF140 (ENSRFEG00010013341) #29	ENSRFEG00010013272	ZNF10 (ENSRFEG00010013113) #31	ZNF268 (ENSRFEG00010012905) #32
Microbat	MODERN SPECIES	1698													P2RX2 (ENSMLUG00000016490) #18	POLE (ENSMLUG00000009113) #19	PXMP2 (ENSMLUG00000016528) #20	PGAM5 (ENSMLUG00000013646) #22	ANKLE2 (ENSMLUG00000013651) #23	GOLGA3 (ENSMLUG00000001618) #24	CHFR (ENSMLUG00000001630) #25	ZNF605 (ENSMLUG00000001635) #27	ZNF140 (ENSMLUG00000009202) #29	ZNF10 (ENSMLUG00000009191) #31	ENSMLUG00000009173	ENSMLUG00000022300 #33