Mus_A	ANCESTRAL SPECIES	2	ENSGT00390000014892 #7	ENSGT00940000160264 #8	ENSGT00940000156604 #9	ENSGT00940000160825 #11	ENSGT01030000234667.a.a.a.a.a #10	ENSGT00940000159764 #12	ENSGT00940000162499 #13	ENSGT00940000156957 #14	ENSGT00940000161349 #15	ENSGT00390000006890 #16	ENSGT00940000157377 #17	ENSGT00550000075078 #18	ENSGT00940000160415 #19	ENSGT00390000005900 #20	ENSGT00950000182881.a.a.b #21	ENSGT00950000182910.b #22	ENSGT01050000244905.B #23	ENSGT01080000257420.C.b.b.a.a #24	ENSGT01080000257420.C.b.b.a.b.b #25	ENSGT00390000016401 #26	ENSGT00390000014272 #27	ENSGT00940000156363 #28	ENSGT00940000154971 #29	ENSGT00510000049735 #30	ENSGT00940000158799 #31	ENSGT00940000153173.b.b #32	ENSGT00940000157202 #33	ENSGT00940000157943.b #34	ENSGT00940000155338 #35	ENSGT00510000048410 #36	ENSGT00390000007911 #37
Ryukyu mouse	MODERN SPECIES	2	Vps25 (MGP_CAROLIEiJ_G0017206) #7	Ramp2 (MGP_CAROLIEiJ_G0017205) #8	Ezh1 (MGP_CAROLIEiJ_G0017204) #9	Ccr10 (MGP_CAROLIEiJ_G0017203) #10	Cntnap1 (MGP_CAROLIEiJ_G0017202) #11	Plekhh3 (MGP_CAROLIEiJ_G0017201) #12	Tubg2 (MGP_CAROLIEiJ_G0017200) #13	Tubg1 (MGP_CAROLIEiJ_G0017199) #14	Retreg3 (MGP_CAROLIEiJ_G0017198) #15	Psmc3ip (MGP_CAROLIEiJ_G0017197) #16	Mlx (MGP_CAROLIEiJ_G0017196) #17	Coasy (MGP_CAROLIEiJ_G0017195) #18	Hsd17b1 (MGP_CAROLIEiJ_G0017194) #19	Naglu (MGP_CAROLIEiJ_G0017193) #20	Atp6v0a1 (MGP_CAROLIEiJ_G0017192) #21	Cavin1 (MGP_CAROLIEiJ_G0017191) #22	Stat3 (MGP_CAROLIEiJ_G0017190) #23	Stat5a (MGP_CAROLIEiJ_G0017189) #24	Stat5b (MGP_CAROLIEiJ_G0017188) #25	Ghdc (MGP_CAROLIEiJ_G0017187) #26	Hcrt (MGP_CAROLIEiJ_G0017186) #27	Kcnh4 (MGP_CAROLIEiJ_G0017185) #28	Rab5c (MGP_CAROLIEiJ_G0017184) #29	Hspb9 (MGP_CAROLIEiJ_G0017183) #30	Kat2a (MGP_CAROLIEiJ_G0017182) #31	Dhx58 (MGP_CAROLIEiJ_G0017181) #32	Zfp385c (MGP_CAROLIEiJ_G0017180) #33	Nkiras2 (MGP_CAROLIEiJ_G0017179) #34	Dnajc7 (MGP_CAROLIEiJ_G0017178) #35	Cnp (MGP_CAROLIEiJ_G0017177) #36	Odad4 (MGP_CAROLIEiJ_G0017176) #37
Mus_B	ANCESTRAL SPECIES	2	ENSGT00390000014892 #7	ENSGT00940000160264 #8	ENSGT00940000156604 #9	ENSGT00940000160825 #11	ENSGT01030000234667.a.a.a.a.a #10	ENSGT00940000159764 #12	ENSGT00940000162499 #13	ENSGT00940000156957 #14	ENSGT00940000161349 #15	ENSGT00390000006890 #16	ENSGT00940000157377 #17	ENSGT00550000075078 #18	ENSGT00940000160415 #19	ENSGT00390000005900 #20	ENSGT00950000182881.a.a.b #21	ENSGT00950000182910.b #22	ENSGT01050000244905.B #23	ENSGT01080000257420.C.b.b.a.a #24	ENSGT01080000257420.C.b.b.a.b.b #25	ENSGT00390000016401 #26	ENSGT00390000014272 #27	ENSGT00940000156363 #28	ENSGT00940000154971 #29	ENSGT00510000049735 #30	ENSGT00940000158799 #31	ENSGT00940000153173.b.b #32	ENSGT00940000157202 #33	ENSGT00940000157943.b #34	ENSGT00940000155338 #35	ENSGT00510000048410 #36	ENSGT00390000007911 #37
Mouse	MODERN SPECIES	2	Vps25 (ENSMUSG00000078656) #7	Ramp2 (ENSMUSG00000001240) #8	Ezh1 (ENSMUSG00000006920) #9	Ccr10 (ENSMUSG00000044052) #10	Cntnap1 (ENSMUSG00000017167) #11	Plekhh3 (ENSMUSG00000035172) #12	Tubg2 (ENSMUSG00000045007) #13	Tubg1 (ENSMUSG00000035198) #14	Retreg3 (ENSMUSG00000017802) #15	Psmc3ip (ENSMUSG00000019303) #16	Mlx (ENSMUSG00000017801) #17	Coasy (ENSMUSG00000001755) #18	Hsd17b1 (ENSMUSG00000019301) #19	Naglu (ENSMUSG00000001751) #20	Atp6v0a1 (ENSMUSG00000019302) #21	Cavin1 (ENSMUSG00000004044) #22	Stat3 (ENSMUSG00000004040) #23	Stat5a (ENSMUSG00000004043) #24	Stat5b (ENSMUSG00000020919) #25	Ghdc (ENSMUSG00000017747) #26	Hcrt (ENSMUSG00000045471) #27	Kcnh4 (ENSMUSG00000035355) #28	Rab5c (ENSMUSG00000019173) #29	Hspb9 (ENSMUSG00000017832) #30	Kat2a (ENSMUSG00000020918) #31	Dhx58 (ENSMUSG00000017830) #32	Zfp385c (ENSMUSG00000014198) #33	Nkiras2 (ENSMUSG00000017837) #34	Dnajc7 (ENSMUSG00000014195) #35	Cnp (ENSMUSG00000006782) #36	Odad4 (ENSMUSG00000006784) #37
Mus_C	ANCESTRAL SPECIES	21	ENSGT00390000014892 #7	ENSGT00940000160264 #8	ENSGT00940000156604 #9	ENSGT00940000160825 #11	ENSGT01030000234667.a.a.a.a.a #10	ENSGT00940000159764 #12	ENSGT00940000162499 #13	ENSGT00940000156957 #14	ENSGT00940000161349 #15	ENSGT00390000006890 #16	ENSGT00940000157377 #17	ENSGT00550000075078 #18	ENSGT00940000160415 #19	ENSGT00390000005900 #20	ENSGT00950000182881.a.a.b #21	ENSGT00950000182910.b #22	ENSGT01050000244905.B #23	ENSGT01080000257420.C.b.b.a.a #24	ENSGT01080000257420.C.b.b.a.b.b #25	ENSGT00390000016401 #26	ENSGT00390000014272 #27	ENSGT00940000156363 #28	ENSGT00940000154971 #29	ENSGT00510000049735 #30	ENSGT00940000158799 #31	ENSGT00940000153173.b.b #32	ENSGT00940000157202 #33	ENSGT00940000157943.b #34	ENSGT00940000155338 #35	ENSGT00510000048410 #36	ENSGT00390000007911 #37
Steppe mouse	MODERN SPECIES	2847	Wnk4 (ENSMSIG00000006627)	ENSMSIG00000006515 #7	Ramp2 (ENSMSIG00000006478) #8	Ezh1 (ENSMSIG00000006338) #9	Cntnap1 (ENSMSIG00000006209) #11	Ccr10 (ENSMSIG00000006184) #10	Plekhh3 (ENSMSIG00000006136) #12	Tubg2 (ENSMSIG00000006006) #13	Retreg3 (ENSMSIG00000005954) #15	Psmc3ip (ENSMSIG00000005936) #16	Mlx (ENSMSIG00000005831) #17	Coasy (ENSMSIG00000005785) #18	Hsd17b1 (ENSMSIG00000005773) #19	Naglu (ENSMSIG00000005762) #20	Atp6v0a1 (ENSMSIG00000005378) #21	Cavin1 (ENSMSIG00000005346) #22	Stat3 (ENSMSIG00000005159) #23	Stat5a (ENSMSIG00000004929) #24	Stat5b (ENSMSIG00000004812) #25	Ghdc (ENSMSIG00000004777) #26	Hcrt (ENSMSIG00000004762) #27	Kcnh4 (ENSMSIG00000004724) #28	Hspb9 (ENSMSIG00000004714) #30	ENSMSIG00000004675 #29	Kat2a (ENSMSIG00000004648) #31	Dhx58 (ENSMSIG00000004582) #32	Zfp385c (ENSMSIG00000004524) #33	Nkiras2 (ENSMSIG00000004500) #34
spretus	MODERN SPECIES	2	Vps25 (MGP_SPRETEiJ_G0018049) #7	Ramp2 (MGP_SPRETEiJ_G0018048) #8	Ezh1 (MGP_SPRETEiJ_G0018047) #9	Ccr10 (MGP_SPRETEiJ_G0018046) #10	Cntnap1 (MGP_SPRETEiJ_G0018045) #11	Plekhh3 (MGP_SPRETEiJ_G0018044) #12	MGP_SPRETEiJ_G0018043 #13	MGP_SPRETEiJ_G0018042 #14	Retreg3 (MGP_SPRETEiJ_G0018041) #15	Psmc3ip (MGP_SPRETEiJ_G0018040) #16	Mlx (MGP_SPRETEiJ_G0018039) #17	Coasy (MGP_SPRETEiJ_G0018038) #18	Hsd17b1 (MGP_SPRETEiJ_G0018037) #19	Naglu (MGP_SPRETEiJ_G0018036) #20	Atp6v0a1 (MGP_SPRETEiJ_G0018035) #21	Cavin1 (MGP_SPRETEiJ_G0018034) #22	Stat3 (MGP_SPRETEiJ_G0018033) #23	MGP_SPRETEiJ_G0018032 #24	Stat5b (MGP_SPRETEiJ_G0018031) #25	Ghdc (MGP_SPRETEiJ_G0018030) #26	Hcrt (MGP_SPRETEiJ_G0018029) #27	Kcnh4 (MGP_SPRETEiJ_G0018028) #28	Rab5c (MGP_SPRETEiJ_G0018027) #29	Hspb9 (MGP_SPRETEiJ_G0018026) #30	Kat2a (MGP_SPRETEiJ_G0018025) #31	Dhx58 (MGP_SPRETEiJ_G0018024) #32	Zfp385c (MGP_SPRETEiJ_G0018023) #33	Nkiras2 (MGP_SPRETEiJ_G0018022) #34	Dnajc7 (MGP_SPRETEiJ_G0018021) #35	Cnp (MGP_SPRETEiJ_G0018020) #36	Odad4 (MGP_SPRETEiJ_G0018019) #37