Glires	ANCESTRAL SPECIES	19	ENSGT00940000153307.d	ENSGT00940000163200	ENSGT00940000161808 #10	ENSGT00390000015147	ENSGT00940000161345 #11	ENSGT00940000156340.a #12	ENSGT00440000038585 #13	ENSGT00530000063156.a.a.b #14	ENSGT00940000161061.b	ENSGT00940000155608 #15	ENSGT00940000162786 #16	ENSGT00940000161301 #17	ENSGT00940000156366.a.b #18	ENSGT00940000156366.a.a #19	ENSGT00940000156821 #21	ENSGT00390000008529 #22	ENSGT00730000110943.B #23	ENSGT00940000155794 #24	ENSGT00940000154601 #25	ENSGT00940000162815 #26	ENSGT00610000086153 #27	ENSGT00390000000571 #29	ENSGT00390000004906 #28	ENSGT01030000234555.a.a.a.c.b #30	ENSGT00940000153592.B.b.b #31	ENSGT00940000153491.b.a #32	ENSGT01000000215173	ENSGT00940000159687 #33	ENSGT00500000044989 #35	ENSGT00940000160353 #34	ENSGT00940000163531 #9
Rodentia	ANCESTRAL SPECIES	20	ENSGT00940000153307.d.a	ENSGT00940000163200	ENSGT00940000161808 #10	ENSGT00390000015147	ENSGT00940000161345 #11	ENSGT00940000156340.a #12	ENSGT00440000038585 #13	ENSGT00530000063156.a.a.b #14	ENSGT00940000161061.b	ENSGT00940000155608 #15	ENSGT00940000162786 #16	ENSGT00940000161301 #17	ENSGT00940000156366.a.b #18	ENSGT00940000156366.a.a #19	ENSGT00940000156821 #21	ENSGT00390000008529 #22	ENSGT00730000110943.B #23	ENSGT00940000155794 #24	ENSGT00940000154601 #25	ENSGT00940000162815 #26	ENSGT00610000086153 #27	ENSGT00390000000571 #29	ENSGT00390000004906 #28	ENSGT01030000234555.a.a.a.c.b #30	ENSGT00940000153592.B.b.b #31	ENSGT00940000153491.b.a #32	ENSGT01000000215173	ENSGT00940000159687 #33	ENSGT00500000044989 #35	ENSGT00940000160353 #34	ENSGT00940000163531 #9
Rodentia_B	ANCESTRAL SPECIES	22	ENSGT00940000161054 #8	ENSGT00940000163200	ENSGT00940000161808 #10	ENSGT00390000015147	ENSGT00940000161345 #11	ENSGT00940000156340.a #12	ENSGT00440000038585 #13	ENSGT00530000063156.a.a.b #14	ENSGT00940000161061.b	ENSGT00940000155608 #15	ENSGT00940000162786 #16	ENSGT00940000161301 #17	ENSGT00940000156366.a.b #18	ENSGT00940000156366.a.a #19	ENSGT00940000156821 #21	ENSGT00390000008529 #22	ENSGT00730000110943.B #23	ENSGT00940000155794 #24	ENSGT00940000154601 #25	ENSGT00940000162815 #26	ENSGT00610000086153 #27	ENSGT00390000000571 #29	ENSGT00390000004906 #28	ENSGT01030000234555.a.a.a.c.b #30	ENSGT00940000153592.B.b.b #31	ENSGT00940000153491.b.a #32	ENSGT01000000215173	ENSGT00940000159687 #33	ENSGT00500000044989 #35	ENSGT00940000160353 #34
Myomorpha	ANCESTRAL SPECIES	47	ENSGT00940000163531 #9	ENSGT00940000163200	ENSGT00940000161808 #10	ENSGT00390000015147	ENSGT00940000161345 #11	ENSGT00940000156340.a #12	ENSGT00440000038585 #13	ENSGT00530000063156.a.a.b #14	ENSGT00940000161061.b	ENSGT00940000155608 #15	ENSGT00940000162786 #16	ENSGT00940000161301 #17	ENSGT00940000156366.a.b #18	ENSGT00940000156366.a.a #19	ENSGT00940000156821 #21	ENSGT00390000008529 #22	ENSGT00730000110943.B #23	ENSGT00940000155794 #24	ENSGT00940000154601 #25	ENSGT00940000162815 #26	ENSGT00610000086153 #27	ENSGT00390000000571 #29	ENSGT00390000004906 #28	ENSGT01030000234555.a.a.a.c.b #30	ENSGT00940000153592.B.b.b #31	ENSGT00940000153491.b.a #32	ENSGT01000000215173	ENSGT00940000159687 #33	ENSGT00500000044989 #35	ENSGT00940000160353 #34
Muroidea	ANCESTRAL SPECIES	39	ENSGT00940000163531 #9	ENSGT00940000163200	ENSGT00940000161808 #10	ENSGT00390000015147	ENSGT00940000161345 #11	ENSGT00940000156340.a #12	ENSGT00440000038585 #13	ENSGT00530000063156.a.a.b #14	ENSGT00940000161061.b	ENSGT00940000155608 #15	ENSGT00940000162786 #16	ENSGT00940000161301 #17	ENSGT00940000156366.a.b #18	ENSGT00940000156366.a.a #19	ENSGT00940000156821 #21	ENSGT00390000008529 #22	ENSGT00730000110943.B #23	ENSGT00940000155794 #24	ENSGT00940000154601 #25	ENSGT00940000162815 #26	ENSGT00610000086153 #27	ENSGT00390000000571 #29	ENSGT00390000004906 #28	ENSGT01030000234555.a.a.a.c.b #30	ENSGT00940000153592.B.b.b #31	ENSGT00940000153491.b.a #32	ENSGT01000000215173	ENSGT00940000159687 #33	ENSGT00500000044989 #35	ENSGT00940000160353 #34
Muroidea_A	ANCESTRAL SPECIES	8	ENSGT00940000160846.d #7	ENSGT00940000161054 #8	ENSGT00940000163531 #9	ENSGT00940000161808 #10	ENSGT00390000015147	ENSGT00940000161345 #11	ENSGT00940000156340.a #12	ENSGT00440000038585 #13	ENSGT00530000063156.a.a.b #14	ENSGT00940000155608 #15	ENSGT00940000162786 #16	ENSGT00940000161301 #17	ENSGT00940000156366.a.b #18	ENSGT00940000156366.a.a #19	ENSGT00940000156821 #21	ENSGT00390000008529 #22	ENSGT00730000110943.B #23	ENSGT00940000155794 #24	ENSGT00940000154601 #25	ENSGT00940000162815 #26	ENSGT00610000086153 #27	ENSGT00390000000571 #29	ENSGT00390000004906 #28	ENSGT01030000234555.a.a.a.c.b #30	ENSGT00940000153592.B.b.b #31	ENSGT00940000153491.b.a #32	ENSGT01000000215173	ENSGT00940000159687 #33	ENSGT00500000044989 #35	ENSGT00940000160353 #34	ENSGT00940000156675 #36
Murinae	ANCESTRAL SPECIES	18	ENSGT00940000160846.d #7	ENSGT00940000161054 #8	ENSGT00940000163531 #9	ENSGT00940000161808 #10	ENSGT00390000015147	ENSGT00940000161345 #11	ENSGT00940000156340.a #12	ENSGT00440000038585 #13	ENSGT00530000063156.a.a.b #14	ENSGT00940000155608.q.a.a #15	ENSGT00940000162786 #16	ENSGT00940000161301 #17	ENSGT00940000156366.a.b #18	ENSGT00940000156366.a.a #19	ENSGT00940000156821 #21	ENSGT00390000008529 #22	ENSGT00730000110943.B #23	ENSGT00940000155794 #24	ENSGT00940000154601 #25	ENSGT00940000162815 #26	ENSGT00610000086153 #27	ENSGT00390000000571 #29	ENSGT00390000004906 #28	ENSGT01030000234555.a.a.a.c.b #30	ENSGT00940000153592.B.b.b #31	ENSGT00940000153491.b.a #32	ENSGT01000000215173	ENSGT00940000159687 #33	ENSGT00500000044989 #35	ENSGT00940000160353 #34	ENSGT00940000156675 #36
Mus	ANCESTRAL SPECIES	15	ENSGT00940000161054 #8	ENSGT00940000163531 #9	ENSGT00940000161808 #10	ENSGT00390000015147	ENSGT00940000161345 #11	ENSGT00940000156340.a #12	ENSGT00440000038585 #13	ENSGT00530000063156.a.a.b #14	ENSGT00940000155608.q.a.a #15	ENSGT00940000162786 #16	ENSGT00940000161301 #17	ENSGT00940000156366.a.b #18	ENSGT00940000156366.a.a.a #19	ENSGT00940000156366.a.a.b #20	ENSGT00940000156821 #21	ENSGT00390000008529 #22	ENSGT00730000110943.B #23	ENSGT00940000155794 #24	ENSGT00940000154601 #25	ENSGT00940000162815 #26	ENSGT00610000086153 #27	ENSGT00390000000571 #29	ENSGT00390000004906 #28	ENSGT01030000234555.a.a.a.c.b #30	ENSGT00940000153592.B.b.b #31	ENSGT00940000153491.b.a #32	ENSGT00940000159687 #33	ENSGT00500000044989 #35	ENSGT00940000160353 #34	ENSGT00940000156675 #36	ENSGT00390000017639 #37
Mus_A	ANCESTRAL SPECIES	11	ENSGT00940000161054 #8	ENSGT00940000163531 #9	ENSGT00940000161808 #10	ENSGT00390000015147	ENSGT00940000161345 #11	ENSGT00940000156340.a #12	ENSGT00440000038585 #13	ENSGT00530000063156.a.a.b #14	ENSGT00940000155608.q.a.a.a #15	ENSGT00940000162786 #16	ENSGT00940000161301 #17	ENSGT00940000156366.a.b #18	ENSGT00940000156366.a.a.a #19	ENSGT00940000156366.a.a.b #20	ENSGT00940000156821 #21	ENSGT00390000008529 #22	ENSGT00730000110943.B #23	ENSGT00940000155794 #24	ENSGT00940000154601 #25	ENSGT00940000162815 #26	ENSGT00610000086153 #27	ENSGT00390000000571 #29	ENSGT00390000004906 #28	ENSGT01030000234555.a.a.a.c.b #30	ENSGT00940000153592.B.b.b #31	ENSGT00940000153491.b.a #32	ENSGT00940000159687 #33	ENSGT00500000044989 #35	ENSGT00940000160353 #34	ENSGT00940000156675 #36	ENSGT00390000017639 #37
Ryukyu mouse	MODERN SPECIES	1	Slc5a4b (MGP_CAROLIEiJ_G0015461) #7	Zfp280b (MGP_CAROLIEiJ_G0015460) #8	Gm5134 (MGP_CAROLIEiJ_G0015459) #9	Vpreb3 (MGP_CAROLIEiJ_G0015458) #10	Chchd10 (MGP_CAROLIEiJ_G0015457) #11	Mmp11 (MGP_CAROLIEiJ_G0015456) #12	Smarcb1 (MGP_CAROLIEiJ_G0015455) #13	Derl3 (MGP_CAROLIEiJ_G0015454) #14	Mif (MGP_CAROLIEiJ_G0015453) #15	Gstt2 (MGP_CAROLIEiJ_G0015452) #16	Gstt4 (MGP_CAROLIEiJ_G0015451) #17	Gstt1 (MGP_CAROLIEiJ_G0015450) #18	Gstt3 (MGP_CAROLIEiJ_G0015449) #19	MGP_CAROLIEiJ_G0015448 #20	Ddt (MGP_CAROLIEiJ_G0015447) #21	Cabin1 (MGP_CAROLIEiJ_G0015446) #22	Susd2 (MGP_CAROLIEiJ_G0015445) #23	Ggt5 (MGP_CAROLIEiJ_G0015444) #24	Ggt1 (MGP_CAROLIEiJ_G0015443) #25	Lrrc75b (MGP_CAROLIEiJ_G0015442) #26	Snrpd3 (MGP_CAROLIEiJ_G0015441) #27	Upb1 (MGP_CAROLIEiJ_G0015440) #28	Gucd1 (MGP_CAROLIEiJ_G0015439) #29	Adora2a (MGP_CAROLIEiJ_G0015438) #30	Specc1l (MGP_CAROLIEiJ_G0015437) #31	Bcr (MGP_CAROLIEiJ_G0015436) #32	Rab36 (MGP_CAROLIEiJ_G0015435) #33	Gnaz (MGP_CAROLIEiJ_G0015434) #34	Rsph14 (MGP_CAROLIEiJ_G0015433) #35	Pcdh15 (MGP_CAROLIEiJ_G0015432) #36	Zwint (MGP_CAROLIEiJ_G0015431) #37
Mus_B	ANCESTRAL SPECIES	10	ENSGT00940000161054 #8	ENSGT00940000163531 #9	ENSGT00940000161808 #10	ENSGT00390000015147	ENSGT00940000161345 #11	ENSGT00940000156340.a #12	ENSGT00440000038585 #13	ENSGT00530000063156.a.a.b #14	ENSGT00940000155608.q.a.a.a.a #15	ENSGT00940000162786 #16	ENSGT00940000161301 #17	ENSGT00940000156366.a.b #18	ENSGT00940000156366.a.a.a #19	ENSGT00940000156366.a.a.b #20	ENSGT00940000156821 #21	ENSGT00390000008529 #22	ENSGT00730000110943.B #23	ENSGT00940000155794 #24	ENSGT00940000154601 #25	ENSGT00940000162815 #26	ENSGT00610000086153 #27	ENSGT00390000000571 #29	ENSGT00390000004906 #28	ENSGT01030000234555.a.a.a.c.b #30	ENSGT00940000153592.B.b.b #31	ENSGT00940000153491.b.a #32	ENSGT00940000159687 #33	ENSGT00500000044989 #35	ENSGT00940000160353 #34	ENSGT00940000156675 #36	ENSGT00390000017639 #37
Mus_C	ANCESTRAL SPECIES	7	ENSGT00940000160846.d #7	ENSGT00940000161054 #8	ENSGT00940000163531 #9	ENSGT00940000161808 #10	ENSGT00940000161345 #11	ENSGT00940000156340.a #12	ENSGT00440000038585 #13	ENSGT00530000063156.a.a.b #14	ENSGT00940000155608.q.a.a.a.a #15	ENSGT00940000162786 #16	ENSGT00940000161301 #17	ENSGT00940000156366.a.b #18	ENSGT00940000156366.a.a.a #19	ENSGT00940000156366.a.a.b #20	ENSGT00940000156821 #21	ENSGT00390000008529 #22	ENSGT00730000110943.B #23	ENSGT00940000155794 #24	ENSGT00940000154601 #25	ENSGT00940000162815 #26	ENSGT00610000086153 #27	ENSGT00390000000571 #29	ENSGT00390000004906 #28	ENSGT01030000234555.a.a.a.c.b #30	ENSGT00940000153592.B.b.b #31	ENSGT00940000153491.b.a #32	ENSGT00940000159687 #33	ENSGT00500000044989 #35	ENSGT00940000160353 #34	ENSGT00940000156675 #36	ENSGT00390000017639 #37
spretus	MODERN SPECIES	1	Slc5a4b (MGP_SPRETEiJ_G0016274) #7	Zfp280b (MGP_SPRETEiJ_G0016273) #8	Gm5134 (MGP_SPRETEiJ_G0016272) #9	Vpreb3 (MGP_SPRETEiJ_G0016271) #10	Chchd10 (MGP_SPRETEiJ_G0016270) #11	Mmp11 (MGP_SPRETEiJ_G0016269) #12	Smarcb1 (MGP_SPRETEiJ_G0016268) #13	Derl3 (MGP_SPRETEiJ_G0016267) #14	Mif (MGP_SPRETEiJ_G0016266) #15	Gstt2 (MGP_SPRETEiJ_G0016265) #16	Gstt4 (MGP_SPRETEiJ_G0016264) #17	Gstt1 (MGP_SPRETEiJ_G0016263) #18	Gstt3 (MGP_SPRETEiJ_G0016262) #19	MGP_SPRETEiJ_G0016261 #20	Ddt (MGP_SPRETEiJ_G0016260) #21	Cabin1 (MGP_SPRETEiJ_G0016259) #22	Susd2 (MGP_SPRETEiJ_G0016258) #23	Ggt5 (MGP_SPRETEiJ_G0016257) #24	Ggt1 (MGP_SPRETEiJ_G0016256) #25	Lrrc75b (MGP_SPRETEiJ_G0016255) #26	Snrpd3 (MGP_SPRETEiJ_G0016254) #27	Upb1 (MGP_SPRETEiJ_G0016253) #28	Gucd1 (MGP_SPRETEiJ_G0016252) #29	Adora2a (MGP_SPRETEiJ_G0016251) #30	Specc1l (MGP_SPRETEiJ_G0016250) #31	Bcr (MGP_SPRETEiJ_G0016249) #32	Rab36 (MGP_SPRETEiJ_G0016248) #33	Gnaz (MGP_SPRETEiJ_G0016247) #34	Rsph14 (MGP_SPRETEiJ_G0016246) #35	Pcdh15 (MGP_SPRETEiJ_G0016245) #36	Zwint (MGP_SPRETEiJ_G0016244) #37
Steppe mouse	MODERN SPECIES	2997	S100b (ENSMSIG00000004765)	Prmt2 (ENSMSIG00000004778)	Slc5a4a (ENSMSIG00000004850) ##7	Slc5a4b (ENSMSIG00000004902) #7	ENSMSIG00000004952	Gm5134 (ENSMSIG00000004960) #9	Vpreb3 (ENSMSIG00000005055) #10	Mmp11 (ENSMSIG00000005065) #12	Smarcb1 (ENSMSIG00000005155) #13	Derl3 (ENSMSIG00000005221) #14	ENSMSIG00000005270 #15	Gstt2 (ENSMSIG00000005282) #16	Gstt4 (ENSMSIG00000005311) #17	Gstt1 (ENSMSIG00000005326) #18	ENSMSIG00000005444 #21	Cabin1 (ENSMSIG00000005480) #22	Susd2 (ENSMSIG00000005634) #23	Ggt5 (ENSMSIG00000005737) #24	Ggt1 (ENSMSIG00000005782) #25	Lrrc75b (ENSMSIG00000005914) #26	Snrpd3 (ENSMSIG00000005945) #27	ENSMSIG00000005965 #29	Upb1 (ENSMSIG00000006025) #28	Adora2a (ENSMSIG00000006083) #30	Specc1l (ENSMSIG00000006141) #31	ENSMSIG00000006554 #32	Rab36 (ENSMSIG00000018821) #33	Rsph14 (ENSMSIG00000018882) #35	Gnaz (ENSMSIG00000018982) #34	ENSMSIG00000019007
Mouse	MODERN SPECIES	1	Zfp280b (ENSMUSG00000049764) #8	Gm5134 (ENSMUSG00000033255) #9	Vpreb3 (ENSMUSG00000000903) #10	Gm867 (ENSMUSG00000050157)	Chchd10 (ENSMUSG00000049422) #11	Mmp11 (ENSMUSG00000000901) #12	Smarcb1 (ENSMUSG00000000902) #13	Derl3 (ENSMUSG00000009092) #14	Mif (ENSMUSG00000033307) #15	Gstt2 (ENSMUSG00000033318) #16	Gstt4 (ENSMUSG00000009093) #17	Gstt1 (ENSMUSG00000001663) #18	Gstt3 (ENSMUSG00000001665) #19	Gm20441 (ENSMUSG00000092360)	Ddt (ENSMUSG00000001666) #21	Cabin1 (ENSMUSG00000020196) #22	Susd2 (ENSMUSG00000006342) #23	Ggt5 (ENSMUSG00000006344) #24	Ggt1 (ENSMUSG00000006345) #25	Lrrc75b (ENSMUSG00000046807) #26	Snrpd3 (ENSMUSG00000020180) #27	Upb1 (ENSMUSG00000033427) #28	Gucd1 (ENSMUSG00000033416) #29	Adora2a (ENSMUSG00000020178) #30	Specc1l (ENSMUSG00000033444) #31	Bcr (ENSMUSG00000009681) #32	Rab36 (ENSMUSG00000020175) #33	Gnaz (ENSMUSG00000040009) #34	Rsph14 (ENSMUSG00000009070) #35	Pcdh15 (ENSMUSG00000052613) #36	Zwint (ENSMUSG00000019923) #37
Shrew mouse	MODERN SPECIES	22	Prmt2 (MGP_PahariEiJ_G0030877)	Slc5a4a (MGP_PahariEiJ_G0030876) ##7	Gm5134 (MGP_PahariEiJ_G0030875) #9	MGP_PahariEiJ_G0030874 #10	Chchd10 (MGP_PahariEiJ_G0030873) #11	Mmp11 (MGP_PahariEiJ_G0030872) #12	Smarcb1 (MGP_PahariEiJ_G0030871) #13	Derl3 (MGP_PahariEiJ_G0030870) #14	Mif (MGP_PahariEiJ_G0030869) #15	Gstt2 (MGP_PahariEiJ_G0030868) #16	Gstt4 (MGP_PahariEiJ_G0030867) #17	Gstt1 (MGP_PahariEiJ_G0030866) #18	Gstt3 (MGP_PahariEiJ_G0030865) #19	MGP_PahariEiJ_G0030864 #20	Ddt (MGP_PahariEiJ_G0030863) #21	Cabin1 (MGP_PahariEiJ_G0030862) #22	Susd2 (MGP_PahariEiJ_G0030861) #23	Ggt5 (MGP_PahariEiJ_G0030860) #24	Ggt1 (MGP_PahariEiJ_G0030859) #25	Lrrc75b (MGP_PahariEiJ_G0030858) #26	Snrpd3 (MGP_PahariEiJ_G0030857) #27	Upb1 (MGP_PahariEiJ_G0030856) #28	Gucd1 (MGP_PahariEiJ_G0030855) #29	Adora2a (MGP_PahariEiJ_G0030854) #30	Specc1l (MGP_PahariEiJ_G0030853) #31	Bcr (MGP_PahariEiJ_G0030852) #32	Rab36 (MGP_PahariEiJ_G0030851) #33	Gnaz (MGP_PahariEiJ_G0030850) #34	Rsph14 (MGP_PahariEiJ_G0030849) #35	Pcdh15 (MGP_PahariEiJ_G0030848) #36	Zwint (MGP_PahariEiJ_G0030847) #37
Rat	MODERN SPECIES	12	Zfp280b (ENSRNOG00000028441) #8	RGD1563815 (ENSRNOG00000029979) #9	Vpreb3 (ENSRNOG00000065441) #10	RGD1564162 (ENSRNOG00000028386)	Chchd10 (ENSRNOG00000028356) #11	Mmp11 (ENSRNOG00000028344) #12	Smarcb1 (ENSRNOG00000028302) #13	Derl3 (ENSRNOG00000028243) #14	Mif (ENSRNOG00000006589) ##15	Gstt2 (ENSRNOG00000052415) #16	LOC108353424 (ENSRNOG00000030242)	Gstt4 (ENSRNOG00000038300) #17	Gstt1 (ENSRNOG00000049771) #18	Gstt3 (ENSRNOG00000001242) #19	Ddt (ENSRNOG00000068887) #21	Cabin1 (ENSRNOG00000001237) #22	Susd2 (ENSRNOG00000033389) #23	AABR07044631.2 (ENSRNOG00000062276) #24	Ggt1 (ENSRNOG00000047697) #25	Lrrc75b (ENSRNOG00000046428) #26	Snrpd3 (ENSRNOG00000050410) #27	Gucd1 (ENSRNOG00000049952) #29	Upb1 (ENSRNOG00000038258) #28	Adora2a (ENSRNOG00000001302) #30	Specc1l (ENSRNOG00000001303) #31	Bcr (ENSRNOG00000001304) #32	ENSRNOG00000068163	Rab36 (ENSRNOG00000001311) #33	Rsph14 (ENSRNOG00000001315) #35	Gnaz (ENSRNOG00000001313) #34	Rpl9-ps20 (ENSRNOG00000068097)
Cricetidae	ANCESTRAL SPECIES	9	ENSGT00940000160846.d #7	ENSGT00940000161054 #8	ENSGT00940000163531 #9	ENSGT00940000161808 #10	ENSGT00390000015147	ENSGT00940000161345 #11	ENSGT00940000156340.a #12	ENSGT00440000038585 #13	ENSGT00530000063156.a.a.b #14	ENSGT00940000155608 #15	ENSGT00940000162786 #16	ENSGT00940000161301 #17	ENSGT00940000156366.a.b #18	ENSGT00940000156366.a.a #19	ENSGT00940000156821 #21	ENSGT00390000008529 #22	ENSGT00730000110943.B #23	ENSGT00940000155794 #24	ENSGT00940000154601 #25	ENSGT00940000162815 #26	ENSGT00610000086153 #27	ENSGT00390000000571 #29	ENSGT00390000004906 #28	ENSGT01030000234555.a.a.a.c.b #30	ENSGT00940000153592.B.b.b #31	ENSGT00940000153491.b.a #32	ENSGT00940000159687 #33	ENSGT00500000044989 #35	ENSGT00940000160353 #34	ENSGT00940000156675 #36	ENSGT00390000017639 #37
Cricetinae	ANCESTRAL SPECIES	24	ENSGT00940000160683	ENSGT00940000160846.c ##7	ENSGT00940000161054 #8	ENSGT00940000163531 #9	ENSGT00940000161808 #10	ENSGT00940000161345 #11	ENSGT00940000156340.a #12	ENSGT00440000038585 #13	ENSGT00530000063156.a.a.b #14	ENSGT00940000155608 #15	ENSGT00940000162786 #16	ENSGT00940000161301 #17	ENSGT00940000156366.a.b #18	ENSGT00940000156366.a.a #19	ENSGT00940000156821 #21	ENSGT00390000008529 #22	ENSGT00730000110943.B #23	ENSGT00940000155794 #24	ENSGT00940000154601 #25	ENSGT00940000162815 #26	ENSGT00610000086153 #27	ENSGT00390000000571 #29	ENSGT00390000004906 #28	ENSGT01030000234555.a.a.a.c.b #30	ENSGT00940000153592.B.b.b #31	ENSGT00940000153491.b.a #32	ENSGT00940000159687 #33	ENSGT00500000044989 #35	ENSGT00940000160353 #34	ENSGT00940000156675 #36	ENSGT00390000017639 #37
Chinese hamster chok1gshd	MODERN SPECIES	204	ENSCGRG00001002616 ##7	ENSCGRG00001024447 ##7	Zfp280b (ENSCGRG00001011844) #8	ENSCGRG00001000305 #9	Vpreb3 (ENSCGRG00001007138) #10	Chchd10 (ENSCGRG00001023480) #11	Mmp11 (ENSCGRG00001001274) #12	Smarcb1 (ENSCGRG00001013732) #13	Derl3 (ENSCGRG00001023562) #14	Mif (ENSCGRG00001002079) #15	Gstt2 (ENSCGRG00001012995) #16	Gstt4 (ENSCGRG00001012558) #17	Gstt1 (ENSCGRG00001016727) #18	Gstt3 (ENSCGRG00001006075) #19	Ddt (ENSCGRG00001021501) #21	Cabin1 (ENSCGRG00001004164) #22	Susd2 (ENSCGRG00001003206) #23	Ggt5 (ENSCGRG00001017907) #24	Ggt1 (ENSCGRG00001022481) #25	Lrrc75b (ENSCGRG00001003802) #26	Snrpd3 (ENSCGRG00001021990) #27	Gucd1 (ENSCGRG00001000582) #29	Upb1 (ENSCGRG00001019047) #28	Adora2a (ENSCGRG00001010977) #30	Specc1l (ENSCGRG00001021028) #31	Bcr (ENSCGRG00001023944) #32	Rab36 (ENSCGRG00001015715) #33	Rsph14 (ENSCGRG00001016126) #35	Gnaz (ENSCGRG00001018902) #34	Pcdh15 (ENSCGRG00001022598) #36	Zwint (ENSCGRG00001021808) #37
Golden Hamster	MODERN SPECIES	641	S100b (ENSMAUG00000015774)	Prmt2 (ENSMAUG00000017688)	Slc5a4a (ENSMAUG00000019866) ##7	Zfp280b (ENSMAUG00000015647) #8	ENSMAUG00000011759 #9	Vpreb3 (ENSMAUG00000010815) #10	Chchd10 (ENSMAUG00000012109) #11	Mmp11 (ENSMAUG00000012311) #12	Smarcb1 (ENSMAUG00000021023) #13	Derl3 (ENSMAUG00000016207) #14	ENSMAUG00000002603 #15	Gstt4 (ENSMAUG00000010826) #17	Gstt1 (ENSMAUG00000020425) #18	Gstt3 (ENSMAUG00000015468) #19	Ddt (ENSMAUG00000015761) #21	Cabin1 (ENSMAUG00000018400) #22	Susd2 (ENSMAUG00000016234) #23	Ggt5 (ENSMAUG00000014824) #24	Ggt1 (ENSMAUG00000012488) #25	Lrrc75b (ENSMAUG00000015122) #26	Snrpd3 (ENSMAUG00000021393) #27	Gucd1 (ENSMAUG00000018270) #29	Upb1 (ENSMAUG00000015089) #28	Adora2a (ENSMAUG00000015630) #30	Specc1l (ENSMAUG00000013399) #31	Bcr (ENSMAUG00000015449) #32	Rab36 (ENSMAUG00000016039) #33	Rsph14 (ENSMAUG00000020248) #35	Gnaz (ENSMAUG00000017932) #34	Pcdh15 (ENSMAUG00000022156) #36	Zwint (ENSMAUG00000014328) #37
Cricetidae_B	ANCESTRAL SPECIES	12	ENSGT00940000160846.d #7	ENSGT00940000161054 #8	ENSGT00940000163531 #9	ENSGT00940000161808 #10	ENSGT00390000015147	ENSGT00940000161345 #11	ENSGT00940000156340.a #12	ENSGT00440000038585 #13	ENSGT00530000063156.a.a.b #14	ENSGT00940000155608 #15	ENSGT00940000162786 #16	ENSGT00940000161301 #17	ENSGT00940000156366.a.b #18	ENSGT00940000156366.a.a #19	ENSGT00940000156821 #21	ENSGT00390000008529 #22	ENSGT00730000110943.B #23	ENSGT00940000155794 #24	ENSGT00940000154601 #25	ENSGT00940000162815 #26	ENSGT00610000086153 #27	ENSGT00390000000571 #29	ENSGT00390000004906 #28	ENSGT01030000234555.a.a.a.c.b #30	ENSGT00940000153592.B.b.b #31	ENSGT00940000153491.b.a #32	ENSGT00940000159687 #33	ENSGT00500000044989 #35	ENSGT00940000160353 #34	ENSGT00940000156675 #36	ENSGT00390000017639 #37
Prairie vole	DUPLICATION
Prairie vole	MODERN SPECIES	352	Slc5a4b (ENSMOCG00000019990) #7	Zfp280b (ENSMOCG00000012097) #8	Gm5134 (ENSMOCG00000021314) #9	Vpreb3 (ENSMOCG00000008215) #10	Chchd10 (ENSMOCG00000010864) #11	Mmp11 (ENSMOCG00000020671) #12	Smarcb1 (ENSMOCG00000019899) #13	Derl3 (ENSMOCG00000017853) #14	Mif (ENSMOCG00000016316) #15	Gstt2 (ENSMOCG00000015654) #16	Gstt4 (ENSMOCG00000011085) #17	Gstt1 (ENSMOCG00000008904) #18	Gstt3 (ENSMOCG00000014623) #19	ENSMOCG00000007362 #21	ENSMOCG00000015205 #22	ENSMOCG00000014877 #22	Susd2 (ENSMOCG00000007836) #23	Ggt5 (ENSMOCG00000022852) #24	Ggt1 (ENSMOCG00000018954) #25	Lrrc75b (ENSMOCG00000010899) #26	Snrpd3 (ENSMOCG00000009361) #27	Gucd1 (ENSMOCG00000008085) #29	Upb1 (ENSMOCG00000004437) #28	ENSMOCG00000002560	Adora2a (ENSMOCG00000017735) #30	Specc1l (ENSMOCG00000005316) #31	Bcr (ENSMOCG00000020282) #32	Rab36 (ENSMOCG00000004529) #33	Gnaz (ENSMOCG00000001656) #34	Rsph14 (ENSMOCG00000022421) #35	Pcdh15 (ENSMOCG00000020866) #36
Prairie vole	MODERN SPECIES	352	Slc5a4a (ENSMOCG00000003852) ##7	Slc5a4b (ENSMOCG00000019990) #7	Zfp280b (ENSMOCG00000012097) #8	Gm5134 (ENSMOCG00000021314) #9	Vpreb3 (ENSMOCG00000008215) #10	Chchd10 (ENSMOCG00000010864) #11	Mmp11 (ENSMOCG00000020671) #12	Smarcb1 (ENSMOCG00000019899) #13	Derl3 (ENSMOCG00000017853) #14	Mif (ENSMOCG00000016316) #15	Gstt2 (ENSMOCG00000015654) #16	Gstt4 (ENSMOCG00000011085) #17	Gstt1 (ENSMOCG00000008904) #18	Gstt3 (ENSMOCG00000014623) #19	ENSMOCG00000007362 #21	ENSMOCG00000015205 #22	ENSMOCG00000014877 #22	Susd2 (ENSMOCG00000007836) #23	Ggt5 (ENSMOCG00000022852) #24	Ggt1 (ENSMOCG00000018954) #25	Lrrc75b (ENSMOCG00000010899) #26	Snrpd3 (ENSMOCG00000009361) #27	Gucd1 (ENSMOCG00000008085) #29	Upb1 (ENSMOCG00000004437) #28	ENSMOCG00000002560	Adora2a (ENSMOCG00000017735) #30	Specc1l (ENSMOCG00000005316) #31	Bcr (ENSMOCG00000020282) #32	Rab36 (ENSMOCG00000004529) #33	Gnaz (ENSMOCG00000001656) #34	Rsph14 (ENSMOCG00000022421) #35
Northern American deer mouse	MODERN SPECIES	13	Slc5a4b (ENSPEMG00000018545) #7	Zfp280b (ENSPEMG00000023991) #8	Gm5134 (ENSPEMG00000017870) #9	Vpreb3 (ENSPEMG00000010214) #10	Gm867 (ENSPEMG00000025778)	Chchd10 (ENSPEMG00000000593) #11	Mmp11 (ENSPEMG00000011798) #12	Smarcb1 (ENSPEMG00000009146) #13	Derl3 (ENSPEMG00000001396) #14	Mif (ENSPEMG00000029509) #15	Gstt2 (ENSPEMG00000011446) #16	Gstt4 (ENSPEMG00000003858) #17	Gstt1 (ENSPEMG00000007647) #18	Gstt3 (ENSPEMG00000024686) #19	Ddt (ENSPEMG00000010371) #21	Cabin1 (ENSPEMG00000002448) #22	Susd2 (ENSPEMG00000007530) #23	ENSPEMG00000028844	Ggt1 (ENSPEMG00000023479) #25	Lrrc75b (ENSPEMG00000014522) #26	ENSPEMG00000027500 #27	Gucd1 (ENSPEMG00000026388) #29	Upb1 (ENSPEMG00000002429) #28	Adora2a (ENSPEMG00000031022) #30	Specc1l (ENSPEMG00000024031) #31	Bcr (ENSPEMG00000015772) #32	Rab36 (ENSPEMG00000023681) #33	Rsph14 (ENSPEMG00000017302) #35	Gnaz (ENSPEMG00000015875) #34	Pcdh15 (ENSPEMG00000015685) #36	ENSPEMG00000026333
Upper Galilee mountains blind mole rat	MODERN SPECIES	1016															ENSNGAG00000012164 #21	Cabin1 (ENSNGAG00000016658) #22	Susd2 (ENSNGAG00000020868) #23	Ggt5 (ENSNGAG00000023145) #24	Ggt1 (ENSNGAG00000001556) #25	Lrrc75b (ENSNGAG00000007348) #26	Snrpd3 (ENSNGAG00000010328) #27	Gucd1 (ENSNGAG00000011244) #29
Lesser Egyptian jerboa	MODERN SPECIES	195	Asphd2 (ENSJJAG00000015992)	Sez6l (ENSJJAG00000015571)	Myo18b (ENSJJAG00000000057)	Grk3 (ENSJJAG00000017760)	Crybb2 (ENSJJAG00000017039)	Gm5134 (ENSJJAG00000016126) #9	Vpreb3 (ENSJJAG00000015699) #10	Chchd10 (ENSJJAG00000015509) #11	Mmp11 (ENSJJAG00000015143) #12	Smarcb1 (ENSJJAG00000010279) #13	Derl3 (ENSJJAG00000009147) #14	Gstt2 (ENSJJAG00000008178) #16	Gstt4 (ENSJJAG00000000095) #17	Gstt3 (ENSJJAG00000000080) #19	Ddt (ENSJJAG00000000321) #21	Cabin1 (ENSJJAG00000013399) #22	Susd2 (ENSJJAG00000019676) #23	Ggt5 (ENSJJAG00000018674) #24	Ggt1 (ENSJJAG00000013933) #25	Snrpd3 (ENSJJAG00000013303) #27	Gucd1 (ENSJJAG00000013100) #29	Plekha5 (ENSJJAG00000010423)	Aebp2 (ENSJJAG00000000268)	ENSJJAG00000021606
Kangaroo rat	MODERN SPECIES	342	Ywhah (ENSDORG00000023737)	Slc5a1 (ENSDORG00000010759)	Slc5a4a (ENSDORG00000006662) ##7	ENSDORG00000025619 #7	Vpreb3 (ENSDORG00000009165) #10	Chchd10 (ENSDORG00000002673) #11	Mmp11 (ENSDORG00000002674) #12	Smarcb1 (ENSDORG00000002679) #13	Derl3 (ENSDORG00000026998) #14	ENSDORG00000000257	Mif (ENSDORG00000028642) #15	Gstt4 (ENSDORG00000025436) #17	Gstt1 (ENSDORG00000007140) #18	Gstt3 (ENSDORG00000029140) #19	Ddt (ENSDORG00000007138) #21	Cabin1 (ENSDORG00000000073) #22	Susd2 (ENSDORG00000000076) #23	Ggt5 (ENSDORG00000003356) #24	Ggt1 (ENSDORG00000009513) #25	Lrrc75b (ENSDORG00000015984) #26	Gucd1 (ENSDORG00000027119) #29	Upb1 (ENSDORG00000015703) #28	Specc1l (ENSDORG00000025097) #31	Bcr (ENSDORG00000005230) #32	Rab36 (ENSDORG00000005225) #33	ENSDORG00000024688 #35
Rodentia_A	ANCESTRAL SPECIES	19	ENSGT00940000163200	ENSGT00940000161808 #10	ENSGT00390000015147	ENSGT00940000161345 #11	ENSGT00940000156340.a #12	ENSGT00440000038585 #13	ENSGT00530000063156.a.a.b #14	ENSGT00940000161061.b	ENSGT00940000155608 #15	ENSGT00940000162786 #16	ENSGT00940000161301 #17	ENSGT00940000156366.a.b #18	ENSGT00940000156366.a.a #19	ENSGT00940000156821.k.b #21	ENSGT00940000156821.k.a #21	ENSGT00390000008529 #22	ENSGT00730000110943.B #23	ENSGT00940000155794 #24	ENSGT00940000154601 #25	ENSGT00940000162815 #26	ENSGT00610000086153 #27	ENSGT00390000000571 #29	ENSGT00390000004906 #28	ENSGT01030000234555.a.a.a.c.b #30	ENSGT00940000153592.B.b.b #31	ENSGT00940000153491.b.a #32	ENSGT00940000159687 #33	ENSGT00500000044989 #35	ENSGT00940000160353 #34	ENSGT00940000163531 #9	ENSGT00940000153307.d.b
Sciuridae	ANCESTRAL SPECIES	42	ENSGT00940000163200	ENSGT00940000161808 #10	ENSGT00390000015147	ENSGT00940000161345 #11	ENSGT00940000156340.a #12	ENSGT00440000038585 #13	ENSGT00530000063156.a.a.b #14	ENSGT00940000161061.b	ENSGT00940000155608 #15	ENSGT00940000162786 #16	ENSGT00940000161301 #17	ENSGT00940000156366.a.b #18	ENSGT00940000156366.a.a #19	ENSGT00940000156821.k.b #21	ENSGT00940000156821.k.a #21	ENSGT00390000008529 #22	ENSGT00730000110943.B #23	ENSGT00940000155794 #24	ENSGT00940000154601 #25	ENSGT00940000162815 #26	ENSGT00610000086153 #27	ENSGT00390000000571 #29	ENSGT00390000004906 #28	ENSGT01030000234555.a.a.a.c.b #30	ENSGT00940000153592.B.b.b #31	ENSGT00940000153491.b.a #32	ENSGT00940000159687 #33	ENSGT00500000044989 #35	ENSGT00940000160353 #34	ENSGT00940000163531 #9	ENSGT00940000153307.d.b
Marmotini	ANCESTRAL SPECIES	53	ENSGT00940000163200	ENSGT00940000161808 #10	ENSGT00390000015147	ENSGT00940000161345 #11	ENSGT00940000156340.a #12	ENSGT00440000038585 #13	ENSGT00530000063156.a.a.b #14	ENSGT00940000161061.b	ENSGT00940000155608 #15	ENSGT00940000162786 #16	ENSGT00940000161301 #17	ENSGT00940000156366.a.b #18	ENSGT00940000156366.a.a #19	ENSGT00940000156821.k.b #21	ENSGT00940000156821.k.a #21	ENSGT00390000008529 #22	ENSGT00730000110943.B #23	ENSGT00940000155794 #24	ENSGT00940000154601 #25	ENSGT00940000162815 #26	ENSGT00610000086153 #27	ENSGT00390000000571 #29	ENSGT00390000004906 #28	ENSGT01030000234555.a.a.a.c.b #30	ENSGT00940000153592.B.b.b #31	ENSGT00940000153491.b.a #32	ENSGT00940000159687 #33	ENSGT00500000044989 #35	ENSGT00940000160353 #34	ENSGT00940000163531 #9	ENSGT00940000153307.d.b.e.a.b
Marmotini_b	ANCESTRAL SPECIES	54	ENSGT00940000163200	ENSGT00940000161808 #10	ENSGT00390000015147	ENSGT00940000161345 #11	ENSGT00940000156340.a #12	ENSGT00440000038585 #13	ENSGT00530000063156.a.a.b #14	ENSGT00940000161061.b	ENSGT00940000155608 #15	ENSGT00940000162786 #16	ENSGT00940000161301 #17	ENSGT00940000156366.a.b #18	ENSGT00940000156366.a.a #19	ENSGT00940000156821.k.b #21	ENSGT00940000156821.k.a #21	ENSGT00390000008529 #22	ENSGT00730000110943.B #23	ENSGT00940000155794 #24	ENSGT00940000154601 #25	ENSGT00940000162815 #26	ENSGT00610000086153 #27	ENSGT00390000000571 #29	ENSGT00390000004906 #28	ENSGT01030000234555.a.a.a.c.b #30	ENSGT00940000153592.B.b.b #31	ENSGT00940000153491.b.a #32	ENSGT00940000159687 #33	ENSGT00500000044989 #35	ENSGT00940000160353 #34	ENSGT00940000163531 #9
Arctic ground squirrel	MODERN SPECIES	543											GSTT4 (ENSUPAG00010004224) #17	ENSUPAG00010004232 #18	ENSUPAG00010004256 #19	ENSUPAG00010004262 #21	ENSUPAG00010004270 #21	CABIN1 (ENSUPAG00010004283) #22	SUSD2 (ENSUPAG00010004527) #23	GGT5 (ENSUPAG00010004553) #24	ENSUPAG00010004571	ENSUPAG00010004577 #25	LRRC75B (ENSUPAG00010004607) #26	SNRPD3 (ENSUPAG00010004612) #27	GUCD1 (ENSUPAG00010004627) #29	UPB1 (ENSUPAG00010004637) #28	ADORA2A (ENSUPAG00010004649) #30	SPECC1L (ENSUPAG00010004655) #31	BCR (ENSUPAG00010004667) #32	RAB36 (ENSUPAG00010004696) #33	RSPH14 (ENSUPAG00010004716) #35	GNAZ (ENSUPAG00010004743) #34	ENSUPAG00010004753 #9
Squirrel	MODERN SPECIES	219	ZNF70 (ENSSTOG00000034699)	VPREB3 (ENSSTOG00000012405) #10	CHCHD10 (ENSSTOG00000008241) #11	MMP11 (ENSSTOG00000008225) #12	SMARCB1 (ENSSTOG00000012408) #13	DERL3 (ENSSTOG00000012421) #14	SLC2A11 (ENSSTOG00000020245)	MIF (ENSSTOG00000027209) #15	ENSSTOG00000031135	ENSSTOG00000033899 #16	ENSSTOG00000012540 #16	GSTT4 (ENSSTOG00000006561) #17	ENSSTOG00000003054 #18	ENSSTOG00000011785 #19	ENSSTOG00000034559 #21	CABIN1 (ENSSTOG00000011791) #22	SUSD2 (ENSSTOG00000011833) #23	ENSSTOG00000032130	GGT5 (ENSSTOG00000022400) #24	ENSSTOG00000014350 #25	LRRC75B (ENSSTOG00000032043) #26	SNRPD3 (ENSSTOG00000025674) #27	GUCD1 (ENSSTOG00000000165) #29	UPB1 (ENSSTOG00000000161) #28	ADORA2A (ENSSTOG00000019368) #30	SPECC1L (ENSSTOG00000000157) #31	BCR (ENSSTOG00000008468) #32	RAB36 (ENSSTOG00000008444) #33	ENSSTOG00000008429 #35	GNAZ (ENSSTOG00000014033) #34	ENSSTOG00000021638 #9
Alpin marmot	MODERN SPECIES	67	ZNF70 (ENSMMMG00000000430)	VPREB3 (ENSMMMG00000000414) #10	C22orf15 (ENSMMMG00000000395)	ENSMMMG00000000382 #11	MMP11 (ENSMMMG00000000358) #12	SMARCB1 (ENSMMMG00000000329) #13	DERL3 (ENSMMMG00000000320) #14	SLC2A11 (ENSMMMG00000000228)	MIF (ENSMMMG00000000214) #15	ENSMMMG00000000149 #16	GSTT4 (ENSMMMG00000000110) #17	ENSMMMG00000000070 #18	ENSMMMG00000000067 #19	ENSMMMG00000000052 #21	ENSMMMG00000000042 #21	CABIN1 (ENSMMMG00000000021) #22	SUSD2 (ENSMMMG00000000013) #23	GGT5 (ENSMMMG00000024445) #24	ENSMMMG00000024444 #25	LRRC75B (ENSMMMG00000024443) #26	SNRPD3 (ENSMMMG00000024441) #27	GUCD1 (ENSMMMG00000024440) #29	UPB1 (ENSMMMG00000024439) #28	ADORA2A (ENSMMMG00000024438) #30	SPECC1L (ENSMMMG00000024437) #31	BCR (ENSMMMG00000024436) #32	RAB36 (ENSMMMG00000024435) #33	GNAZ (ENSMMMG00000024434) #34	RSPH14 (ENSMMMG00000024432) #35	ENSMMMG00000024429 #9	ENSMMMG00000024427
Eurasian red squirrel	MODERN SPECIES	17	VPREB3 (ENSSVLG00005006794) #10	C22orf15 (ENSSVLG00005006744)	CHCHD10 (ENSSVLG00005006718) #11	MMP11 (ENSSVLG00005006688) #12	SMARCB1 (ENSSVLG00005006606) #13	DERL3 (ENSSVLG00005006510) #14	SLC2A11 (ENSSVLG00005006380)	MIF (ENSSVLG00005006339) #15	ENSSVLG00005006314	ENSSVLG00005006292 #16	GSTT4 (ENSSVLG00005006254) #17	ENSSVLG00005006229 #18	ENSSVLG00005006193 ##18	ENSSVLG00005006177 #21	ENSSVLG00005006131	CABIN1 (ENSSVLG00005006001) #22	SUSD2 (ENSSVLG00005005881) #23	ENSSVLG00005005852	GGT5 (ENSSVLG00005005644) #24	ENSSVLG00005005413 #25	LRRC75B (ENSSVLG00005005370) #26	SNRPD3 (ENSSVLG00005005327) #27	GUCD1 (ENSSVLG00005005243) #29	UPB1 (ENSSVLG00005005173) #28	ADORA2A (ENSSVLG00005005154) #30	SPECC1L (ENSSVLG00005005084) #31	ENSSVLG00005005044	BCR (ENSSVLG00005004988) #32	RAB36 (ENSSVLG00005004911) #33	GNAZ (ENSSVLG00005004858) #34	RSPH14 (ENSSVLG00005004828) #35
Hystricomorpha	ANCESTRAL SPECIES		ENSGT00950000182928.A.b	ENSGT00530000065303	ENSGT00940000163200	ENSGT00940000161808 #10	ENSGT00390000015147	ENSGT00940000161345 #11	ENSGT00940000156340.a #12	ENSGT00440000038585 #13	ENSGT00530000063156.a.a.b #14	ENSGT00940000161061.b	ENSGT00940000155608 #15	ENSGT00940000162786 #16	ENSGT00940000161301 #17	ENSGT00940000156366.a.b #18	ENSGT00940000156366.b ##18	ENSGT00390000008529 #22	ENSGT00730000110943.B #23	ENSGT00940000155794 #24	ENSGT00940000154601 #25	ENSGT00940000162815 #26	ENSGT00610000086153 #27	ENSGT00390000000571 #29	ENSGT00390000004906 #28	ENSGT01030000234555.a.a.a.c.b #30	ENSGT00940000153592.B.b.b #31	ENSGT00940000153491.b.a #32	ENSGT00940000159687 #33	ENSGT00500000044989 #35	ENSGT00940000160353 #34	ENSGT00940000163531 #9	ENSGT00940000153307.d.b
Hystricomorpha_a	ANCESTRAL SPECIES	2	ENSGT00950000182928.A.b	ENSGT00530000065303	ENSGT00940000163200	ENSGT00940000161808 #10	ENSGT00940000161345 #11	ENSGT00390000015147	ENSGT00940000156340.a #12	ENSGT00440000038585 #13	ENSGT00530000063156.a.a.b #14	ENSGT00940000161061.b	ENSGT00940000155608 #15	ENSGT00940000162786 #16	ENSGT00940000161301 #17	ENSGT00940000156366.a.b #18	ENSGT00940000156366.b ##18	ENSGT00390000008529 #22	ENSGT00730000110943.B #23	ENSGT00940000155794 #24	ENSGT00940000154601 #25	ENSGT00940000162815 #26	ENSGT00610000086153 #27	ENSGT00390000000571 #29	ENSGT00390000004906 #28	ENSGT01030000234555.a.a.a.c.b #30	ENSGT00940000153592.B.b.b #31	ENSGT00940000153491.b.a #32	ENSGT00940000159687 #33	ENSGT00500000044989 #35	ENSGT00940000160353 #34	ENSGT00940000163531 #9	ENSGT00940000153307.d.b
Hystricomorpha_b	ANCESTRAL SPECIES	1	ENSGT00940000156383	ENSGT00950000182928.A.b	ENSGT00530000065303	ENSGT00940000163200	ENSGT00940000161808 #10	ENSGT00940000161345 #11	ENSGT00390000015147	ENSGT00940000156340.a #12	ENSGT00440000038585 #13	ENSGT00530000063156.a.a.b #14	ENSGT00940000161061.b	ENSGT00940000155608 #15	ENSGT00940000161301 #17	ENSGT00940000156366.a.b #18	ENSGT00940000156366.b ##18	ENSGT00390000008529 #22	ENSGT00730000110943.B #23	ENSGT00940000155794 #24	ENSGT00940000154601 #25	ENSGT00940000162815 #26	ENSGT00610000086153 #27	ENSGT00390000000571 #29	ENSGT00390000004906 #28	ENSGT01030000234555.a.a.a.c.b #30	ENSGT00940000153592.B.b.b #31	ENSGT00940000153491.b.a #32	ENSGT00940000159687 #33	ENSGT00500000044989 #35	ENSGT00940000160353 #34	ENSGT00940000163531 #9	ENSGT00940000162558.j
Long-tailed chinchilla	MODERN SPECIES	162	GIT2 (ENSCLAG00000008324)	ANKRD13A (ENSCLAG00000011896)	ZNF70 (ENSCLAG00000017808)	VPREB3 (ENSCLAG00000012632) #10	CHCHD10 (ENSCLAG00000010445) #11	C22orf15 (ENSCLAG00000011415)	MMP11 (ENSCLAG00000009935) #12	SMARCB1 (ENSCLAG00000008073) #13	DERL3 (ENSCLAG00000009023) #14	SLC2A11 (ENSCLAG00000012425)	MIF (ENSCLAG00000009103) #15	GSTT4 (ENSCLAG00000008513) #17	ENSCLAG00000008091 #18	ENSCLAG00000015172	ENSCLAG00000013010 ##18	CABIN1 (ENSCLAG00000007869) #22	SUSD2 (ENSCLAG00000011078) #23	GGT5 (ENSCLAG00000007957) #24	ENSCLAG00000011279 #25	LRRC75B (ENSCLAG00000012160) #26	SNRPD3 (ENSCLAG00000011403) #27	GUCD1 (ENSCLAG00000010734) #29	UPB1 (ENSCLAG00000010001) #28	ADORA2A (ENSCLAG00000009130) #30	SPECC1L (ENSCLAG00000008544) #31	BCR (ENSCLAG00000010442) #32	RAB36 (ENSCLAG00000010317) #33	GNAZ (ENSCLAG00000010101) #34	RSPH14 (ENSCLAG00000007632) #35	ENSCLAG00000009100 #9	ENSCLAG00000014380
Degu	MODERN SPECIES	120	TCHP (ENSODEG00000009235)	GIT2 (ENSODEG00000007446)	ANKRD13A (ENSODEG00000008089)	C12orf76 (ENSODEG00000006686)	ZNF70 (ENSODEG00000019446)	VPREB3 (ENSODEG00000006591) #10	CHCHD10 (ENSODEG00000006934) #11	MMP11 (ENSODEG00000008612) #12	ENSODEG00000006764 #13	DERL3 (ENSODEG00000007454) #14	SLC2A11 (ENSODEG00000007118)	MIF (ENSODEG00000006630) #15	GSTT4 (ENSODEG00000007090) #17	ENSODEG00000008425 #18	ENSODEG00000007409 ##18	CABIN1 (ENSODEG00000007920) #22	SUSD2 (ENSODEG00000008082) #23	GGT5 (ENSODEG00000008164) #24	ENSODEG00000012141 #25	LRRC75B (ENSODEG00000007792) #26	SNRPD3 (ENSODEG00000008064) #27	GUCD1 (ENSODEG00000009190) #29	UPB1 (ENSODEG00000008169) #28	ENSODEG00000019780	ADORA2A (ENSODEG00000009102) #30	SPECC1L (ENSODEG00000008131) #31	ENSODEG00000007297	ENSODEG00000019487	ENSODEG00000007642	BCR (ENSODEG00000009004) #32	RAB36 (ENSODEG00000009016) #33
Guinea pig	MODERN SPECIES	4	GIT2 (ENSCPOG00000012863)	ANKRD13A (ENSCPOG00000012868)	C12orf76 (ENSCPOG00000030105)	ZNF70 (ENSCPOG00000032266)	VPREB3 (ENSCPOG00000038412) #10	CHCHD10 (ENSCPOG00000014612) #11	MMP11 (ENSCPOG00000003507) #12	SMARCB1 (ENSCPOG00000036261) #13	DERL3 (ENSCPOG00000014616) #14	SLC2A11 (ENSCPOG00000013518)	MIF (ENSCPOG00000033496) #15	ENSCPOG00000033118 #16	GSTT4 (ENSCPOG00000019914) #17	ENSCPOG00000004068 #18	ENSCPOG00000036578 ##18	CABIN1 (ENSCPOG00000010872) #22	SUSD2 (ENSCPOG00000012834) #23	GGT5 (ENSCPOG00000008003) #24	ENSCPOG00000008956 #25	LRRC75B (ENSCPOG00000030691) #26	SNRPD3 (ENSCPOG00000033102) #27	GUCD1 (ENSCPOG00000030584) #29	UPB1 (ENSCPOG00000003919) #28	ADORA2A (ENSCPOG00000006104) #30	SPECC1L (ENSCPOG00000007308) #31	BCR (ENSCPOG00000021817) #32	RAB36 (ENSCPOG00000011501) #33	RSPH14 (ENSCPOG00000011500) #35	GNAZ (ENSCPOG00000033926) #34	ENSCPOG00000023038 #9	ENSCPOG00000037725
Naked mole-rat female	MODERN SPECIES	15	ENSHGLG00000014489	GIT2 (ENSHGLG00000015609)	ANKRD13A (ENSHGLG00000018688)	ENSHGLG00000047620	ENSHGLG00000018817	VPREB3 (ENSHGLG00000043407) #10	C22orf15 (ENSHGLG00000041140)	CHCHD10 (ENSHGLG00000037941) #11	MMP11 (ENSHGLG00000018761) #12	SMARCB1 (ENSHGLG00000019077) #13	DERL3 (ENSHGLG00000018280) #14	SLC2A11 (ENSHGLG00000018680)	Mif (ENSHGLG00000041245) #15	ENSHGLG00000011840 #18	ENSHGLG00000035410	CABIN1 (ENSHGLG00000010286) #22	SUSD2 (ENSHGLG00000009484) #23	ENSHGLG00000018936 #24	ENSHGLG00000019551 #25	LRRC75B (ENSHGLG00000016897) #26	ENSHGLG00000046145	SNRPD3 (ENSHGLG00000044971) #27	GUCD1 (ENSHGLG00000037847) #29	UPB1 (ENSHGLG00000014750) #28	ADORA2A (ENSHGLG00000032320) #30	ENSHGLG00000011969 #31	ENSHGLG00000010295 #32	ENSHGLG00000009476 #33	RSPH14 (ENSHGLG00000011976) #35	GNAZ (ENSHGLG00000011460) #34	ENSHGLG00000009410 #9
Lagomorpha	ANCESTRAL SPECIES	138					ENSGT00940000161808 #10	ENSGT00940000156340.a #12	ENSGT00440000038585 #13	ENSGT00530000063156.a.a.b #14	ENSGT00940000161061.b	ENSGT00940000155608 #15	ENSGT00940000162786 #16	ENSGT00940000161301 #17	ENSGT00940000156366.a.b #18	ENSGT00940000156366.b ##18	ENSGT00940000156821 #21	ENSGT00390000008529 #22	ENSGT00730000110943.B #23	ENSGT00940000155794 #24	ENSGT00940000154601 #25	ENSGT00610000086153 #27	ENSGT00390000000571 #29	ENSGT00390000004906 #28	ENSGT01030000234555.a.a.a.c.b #30	ENSGT00940000153592.B.b.b #31	ENSGT00940000153491.b.a #32	ENSGT00940000159687 #33	ENSGT00940000160353 #34	ENSGT00500000044989 #35	ENSGT00940000163531 #9
Rabbit	MODERN SPECIES	543									SLC2A11 (ENSOCUG00000015691)	MIF (ENSOCUG00000024383) #15	ENSOCUG00000005066 #16	GSTT4 (ENSOCUG00000005064) #17	ENSOCUG00000005061 #18	ENSOCUG00000004420 ##18	ENSOCUG00000026742 #21	CABIN1 (ENSOCUG00000000404) #22	SUSD2 (ENSOCUG00000007488) #23	GGT5 (ENSOCUG00000012233) #24	ENSOCUG00000026549 #25	SNRPD3 (ENSOCUG00000004845) #27	GUCD1 (ENSOCUG00000004837) #29	UPB1 (ENSOCUG00000004836) #28	ADORA2A (ENSOCUG00000008714) #30	SPECC1L (ENSOCUG00000000105) #31	BCR (ENSOCUG00000004923) #32	RAB36 (ENSOCUG00000004914) #33	GNAZ (ENSOCUG00000004912) #34	RSPH14 (ENSOCUG00000021875) #35	ENSOCUG00000022793 #9
Pika	MODERN SPECIES	8738																CABIN1 (ENSOPRG00000012415) #22