Tetrapoda ANCESTRAL SPECIES 93 ENSGT00390000010652.C ENSGT00390000010652.B ENSGT00940000160472 ENSGT00390000004097.b ENSGT00940000161073 ENSGT00390000014184 ENSGT00940000156223 ENSGT00940000165154 ENSGT00940000154879 ENSGT00390000008274 ENSGT00940000164585.d ENSGT00390000002869 ENSGT00940000160475 ENSGT00390000000920 ENSGT00940000161521 #27 ENSGT00940000154197 #22 ENSGT00940000160047 #23 ENSGT00940000163537 #26 Amniota ANCESTRAL SPECIES 28 ENSGT00940000161073 ENSGT00390000014184 ENSGT00940000156223 ENSGT00940000154879 ENSGT00390000008274 ENSGT00940000164585.d ENSGT00390000002869 ENSGT00940000160475 ENSGT00940000161854 ENSGT00940000161706 ENSGT00390000000920 ENSGT00940000161276.A ENSGT00940000162465 #12 ENSGT00940000154467 #13 ENSGT00940000154172 #21 ENSGT00940000154197 #22 ENSGT00940000160047 #23 ENSGT00940000163537 #26 ENSGT00940000161521 #27 ENSGT00940000154996.a.a ENSGT00940000165314 ENSGT00940000159364 #29 ENSGT00940000161581 #30 ENSGT00390000008281 #31 ENSGT00390000003062 #33 ENSGT00940000154716 #34 ENSGT00950000183212.C #35 ENSGT00950000183065.B #36 ENSGT00940000154489.B ENSGT00940000160649 ENSGT00390000000698 Mammalia ANCESTRAL SPECIES 25 ENSGT00390000000920 ENSGT00940000161276.A ENSGT00940000163114 ENSGT00940000161959 ENSGT00940000161276.C ENSGT00940000161986 ENSGT00940000161896 ENSGT00960000189301 ENSGT00910000144329 ENSGT00940000162189 ENSGT00940000161606 ENSGT00940000162349 ENSGT00940000161937 #25 ENSGT00940000154467.a #16 ENSGT00940000154172 #21 ENSGT00940000154197 #22 ENSGT00940000160047 #23 ENSGT00940000163537 #26 ENSGT00940000161521 #27 ENSGT00940000159364 #29 ENSGT00940000161581 #30 ENSGT00390000008281 #31 ENSGT00390000003062 #33 ENSGT00940000154716 #34 ENSGT00950000183212.C #35 ENSGT00950000183065.B #36 ENSGT00940000154489.B ENSGT00940000160649 ENSGT00390000000698 ENSGT00390000014244 ENSGT01050000244970.a Theria ANCESTRAL SPECIES 3 ENSGT00940000161706 ENSGT00390000000920 ENSGT00940000163114 ENSGT00940000161959 ENSGT00940000161276.C ENSGT00940000161986 ENSGT00940000161896 ENSGT00910000144375 ENSGT00910000144329 ENSGT00940000162189 ENSGT00940000161606 ENSGT00940000162349 ENSGT00940000154467.b.b.a #14 ENSGT00940000154467.a #16 ENSGT00940000154172 #21 ENSGT00940000154197 #22 ENSGT00940000160047 #23 ENSGT00940000161937 #25 ENSGT00940000163537 #26 ENSGT00940000161521 #27 ENSGT00940000162157 #28 ENSGT00940000159364 #29 ENSGT00940000161581 #30 ENSGT00390000008281 #31 ENSGT00390000003062 #33 ENSGT00940000154716 #34 ENSGT00950000183212.C #35 ENSGT00950000183065.B #36 ENSGT00940000154489.B ENSGT00940000162698 #37 ENSGT00940000160649 Eutheria DUPLICATION Eutheria ANCESTRAL SPECIES ENSGT00940000161896 ENSGT00910000144375 ENSGT00910000144329 ENSGT00940000162189 ENSGT00940000161606 ENSGT00940000162349 ENSGT00940000162657 ENSGT00940000163498 ENSGT00940000162465 #12 ENSGT00940000154467.b.b.b #13 ENSGT00940000154467.b.b.a #14 ENSGT00940000154467.a #16 ENSGT00940000163983 #17 ENSGT00940000162966 #18 ENSGT00940000154172 #21 ENSGT00940000154197.b #22 ENSGT00940000160047 #23 ENSGT00940000161937 #25 ENSGT00940000163537 #26 ENSGT00940000161521 #27 ENSGT00940000162157 #28 ENSGT00940000159364 #29 ENSGT00940000161581 #30 ENSGT00390000008281 #31 ENSGT00390000003062 #33 ENSGT00940000154716 #34 ENSGT00950000183212.C #35 ENSGT00950000183065.B #36 ENSGT00940000154489.B ENSGT00940000162698 #37 ENSGT00940000160649 Boreoeutheria DUPLICATION Boreoeutheria ANCESTRAL SPECIES ENSGT00730000111580 #10 ENSGT00940000163498 ENSGT00940000165404 ENSGT00940000163905 ENSGT00730000113097 #11 ENSGT00940000161842.a ENSGT00940000162465 #12 ENSGT00940000154467.b.b.b #13 ENSGT00940000154467.b.b.a #14 ENSGT00940000170498 ENSGT00940000154467.b.a #15 ENSGT00940000154467.a #16 ENSGT00940000163983 #17 ENSGT00940000162966 #18 ENSGT00940000154172 #21 ENSGT00940000154197.b.b #22 ENSGT00940000160047 #23 ENSGT00940000161937 #25 ENSGT00940000163537 #26 ENSGT00940000161521 #27 ENSGT00940000162157 #28 ENSGT00940000159364 #29 ENSGT00940000161581 #30 ENSGT00390000008281 #31 ENSGT00390000003062 #33 ENSGT00940000154716 #34 ENSGT00950000183212.C #35 ENSGT00950000183065.B #36 ENSGT00940000154489.B ENSGT00940000162698 #37 ENSGT00940000160649 Laurasiatheria ANCESTRAL SPECIES ENSGT00730000111580 #10 ENSGT00940000163498 ENSGT00940000165404 ENSGT00940000163905 ENSGT00730000113097 #11 ENSGT00940000161842.a ENSGT00940000162465 #12 ENSGT00940000154467.b.b.b #13 ENSGT00940000154467.b.b.a #14 ENSGT00940000170498 ENSGT00940000154467.b.a #15 ENSGT00940000154467.a #16 ENSGT00940000163983 #17 ENSGT00940000162966 #18 ENSGT00940000154172 #21 ENSGT00940000154197.b.b #22 ENSGT00940000160047 #23 ENSGT00940000161937 #25 ENSGT00940000163537 #26 ENSGT00940000161521 #27 ENSGT00940000162157 #28 ENSGT00940000159364 #29 ENSGT00940000161581 #30 ENSGT00390000008281 #31 ENSGT00390000003062 #33 ENSGT00940000154716 #34 ENSGT00950000183212.C #35 ENSGT00950000183065.B #36 ENSGT00940000162698 #37 ENSGT00940000160649 ENSGT00390000000698 Laurasiatheria_a ANCESTRAL SPECIES ENSGT00940000165404 ENSGT00940000163905 ENSGT00940000163498 ENSGT00730000113097 #11 ENSGT00940000161842.a ENSGT00940000162465 #12 ENSGT00940000154467.b.b.b #13 ENSGT00940000154467.b.b.a #14 ENSGT00940000154467.a.h.a ##13 ENSGT00940000170498 ENSGT00940000154467.b.a #15 ENSGT00940000154467.a.i #16 ENSGT00940000163983 #17 ENSGT00940000162966 #18 ENSGT00940000154172 #21 ENSGT00940000154197.b.b #22 ENSGT00940000160047 #23 ENSGT00940000161937 #25 ENSGT00940000163537 #26 ENSGT00940000161521 #27 ENSGT00940000162157 #28 ENSGT00940000159364 #29 ENSGT00940000161581 #30 ENSGT00390000008281 #31 ENSGT00390000003062 #33 ENSGT00940000154716 #34 ENSGT00950000183212.C #35 ENSGT00950000183065.B #36 ENSGT00940000162698 #37 ENSGT00940000160649 ENSGT00390000000698 Laurasiatheria_b ANCESTRAL SPECIES ENSGT00730000111580 #10 ENSGT00940000163905 ENSGT00940000165404 ENSGT00940000163498 ENSGT00730000113097 #11 ENSGT00940000161842.a ENSGT00940000162465 #12 ENSGT00940000154467.b.b.b #13 ENSGT00940000154467.b.b.a #14 ENSGT00940000170498 ENSGT00940000154467.b.a #15 ENSGT00940000154467.a.i #16 ENSGT00940000163983 #17 ENSGT00940000162966 #18 ENSGT00940000154172 #21 ENSGT00940000154197.b.b #22 ENSGT00940000160047 #23 ENSGT00940000161937 #25 ENSGT00940000163537 #26 ENSGT00940000161521 #27 ENSGT00940000162157 #28 ENSGT00940000159364 #29 ENSGT00940000161581 #30 ENSGT00390000008281 #31 ENSGT00390000003062 #33 ENSGT00940000154716 #34 ENSGT00950000183212.C #35 ENSGT00950000183065.B #36 ENSGT00940000162698 #37 ENSGT00940000160649 ENSGT00390000000698 Carnivora ANCESTRAL SPECIES 1 ENSGT00950000183301 ENSGT00730000111554 ENSGT00730000111580 #10 ENSGT00940000163905 ENSGT00730000113097 #11 ENSGT00940000161842.a ENSGT00940000162465 #12 ENSGT00940000154467.b.b.b #13 ENSGT00940000154467.b.b.a #14 ENSGT00940000170498 ENSGT00940000154467.b.a #15 ENSGT00940000154467.a.i #16 ENSGT00940000163983 #17 ENSGT00940000162966 #18 ENSGT00940000154172 #21 ENSGT00940000154197.b.b #22 ENSGT00940000160047 #23 ENSGT00940000161937 #25 ENSGT00940000163537 #26 ENSGT00940000161521 #27 ENSGT00940000162157 #28 ENSGT00940000159364 #29 ENSGT00940000161581 #30 ENSGT00390000008281 #31 ENSGT00390000003062 #33 ENSGT00940000154716 #34 ENSGT00950000183212.C #35 ENSGT00950000183065.B #36 ENSGT00940000162698 #37 ENSGT00940000160649 ENSGT00390000000698 Caniformia ANCESTRAL SPECIES 31 ENSGT00940000164168 ENSGT00440000039991 ENSGT00950000183301 ENSGT00730000111554 ENSGT00730000111580 #10 ENSGT00940000163905 ENSGT00940000162465 #12 ENSGT00940000154467.b.b.b #13 ENSGT00940000154467.b.b.a #14 ENSGT00940000170498 ENSGT00940000154467.b.a #15 ENSGT00940000154467.a.i #16 ENSGT00940000163983 #17 ENSGT00940000162966 #18 ENSGT00940000154172 #21 ENSGT00940000154197.b.b #22 ENSGT00940000160047 #23 ENSGT00940000161937 #25 ENSGT00940000163537 #26 ENSGT00940000161521 #27 ENSGT00940000162157 #28 ENSGT00940000159364 #29 ENSGT00940000161581 #30 ENSGT00390000008281 #31 ENSGT00390000003062 #33 ENSGT00940000154716 #34 ENSGT00950000183212.C #35 ENSGT00950000183065.B #36 ENSGT00940000162698 #37 ENSGT00940000160649 ENSGT00390000000698 Canidae DUPLICATION Canidae ANCESTRAL SPECIES 18 ENSGT00940000164168 ENSGT00440000039991 ENSGT00780000122937 ENSGT00950000183312 ENSGT00940000176100.e #9 ENSGT00730000111554 ENSGT00730000111580 #10 ENSGT00940000162465 #12 ENSGT00940000154467.b.b.b #13 ENSGT00940000154467.b.b.a #14 ENSGT00940000154467.b.a #15 ENSGT00940000154467.a.i #16 ENSGT00940000163983 #17 ENSGT00940000162966 #18 ENSGT00940000154172 #21 ENSGT00940000154197.b.b.ab #22 ENSGT00940000160047 #23 ENSGT00940000161937 #25 ENSGT00940000163537 #26 ENSGT00940000161521 #27 ENSGT00940000162157 #28 ENSGT00940000159364 #29 ENSGT00940000161581 #30 ENSGT00390000008281 #31 ENSGT00390000003062 #33 ENSGT00940000154716 #34 ENSGT00950000183212.C #35 ENSGT00950000183065.B #36 ENSGT00940000162698 #37 ENSGT00940000160649 ENSGT00390000000698 Canis_lupus ANCESTRAL SPECIES 10 ENSGT00940000164168 ENSGT01050000246051 ENSGT00780000122937 ENSGT00950000183312 ENSGT00940000176100.e #9 ENSGT00730000111554 ENSGT00730000111580 #10 ENSGT00940000162465 #12 ENSGT00940000154467.b.b.b #13 ENSGT00940000154467.b.b.a #14 ENSGT00940000154467.b.a #15 ENSGT00940000154467.a.i #16 ENSGT00940000163983 #17 ENSGT00940000162966 #18 ENSGT00940000154172 #21 ENSGT00940000154197.b.b.ab #22 ENSGT00940000160047 #23 ENSGT01090000260046.e.b.b.b.b #24 ENSGT00940000161937 #25 ENSGT00940000163537 #26 ENSGT00940000161521 #27 ENSGT00940000162157 #28 ENSGT00940000159364 #29 ENSGT00940000161581 #30 ENSGT00390000008281.o #31 ENSGT00390000003062 #33 ENSGT00940000154716 #34 ENSGT00950000183212.C #35 ENSGT00950000183065.B #36 ENSGT00940000162698 #37 ENSGT00940000160649 Dog DUPLICATION Dog MODERN SPECIES 8 ENSCAFG00845026168 #7 ENSCAFG00845026131 #8 ENSCAFG00845026059 #9 C1orf68 (ENSCAFG00845026034) #10 ENSCAFG00845025984 #11 ENSCAFG00845025948 #12 ENSCAFG00845025920 #13 ENSCAFG00845025895 #14 ENSCAFG00845025860 #15 RPTN (ENSCAFG00845025826) #16 ENSCAFG00845025766 #17 TCHHL1 (ENSCAFG00845025618) #18 ENSCAFG00845025590 #19 ENSCAFG00845025548 #20 ENSCAFG00845025500 #21 S100A10 (ENSCAFG00845025458) #22 THEM4 (ENSCAFG00845025388) #23 ENSCAFG00845025367 #24 THEM5 (ENSCAFG00845025312) #25 ENSCAFG00845025285 #26 RORC (ENSCAFG00845025144) #27 LINGO4 (ENSCAFG00845025100) #28 TDRKH (ENSCAFG00845024938) #29 OAZ3 (ENSCAFG00845024748) #30 ENSCAFG00845024650 #31 ENSCAFG00845024612 #32 RIIAD1 (ENSCAFG00845024568) #33 CELF3 (ENSCAFG00845024380) #34 SNX27 (ENSCAFG00845024124) #35 TUFT1 (ENSCAFG00845023851) #36 CGN (ENSCAFG00845023683) #37 Dog MODERN SPECIES 144 ENSCAFG00845020965 GABRA3 (ENSCAFG00845025696) ENSCAFG00845025642 ENSCAFG00845025623 GABRE (ENSCAFG00845025508) ENSCAFG00845025413 ENSCAFG00845025383 CNGA2 (ENSCAFG00845025318) FATE1 (ENSCAFG00845025266) PRRG3 (ENSCAFG00845025199) PASD1 (ENSCAFG00845024984) VMA21 (ENSCAFG00845024854) ENSCAFG00845024819 ENSCAFG00845024779 GPR50 (ENSCAFG00845024698) S100A10 (ENSCAFG00845024667) ##22 HMGB3 (ENSCAFG00845024577) ENSCAFG00845024375 MTMR1 (ENSCAFG00845023576) ENSCAFG00845023123 ENSCAFG00845023024 ENSCAFG00845022945 ##24 ENSCAFG00845022636 ENSCAFG00845022615 ENSCAFG00845022395 ENSCAFG00845022345 ENSCAFG00845022298 ENSCAFG00845022285 ENSCAFG00845022257 ENSCAFG00845022166 ENSCAFG00845022106 Dingo MODERN SPECIES 223 ENSCAFG00020009390 ENSCAFG00020009395 LCE7A (ENSCAFG00020009396) ENSCAFG00020009400 #9 KPRP (ENSCAFG00020009402) C1orf68 (ENSCAFG00020009403) #10 ENSCAFG00020009418 #12 ENSCAFG00020009420 #13 ENSCAFG00020009424 #9 ENSCAFG00020009446 #15 ENSCAFG00020009450 #15 TCHHL1 (ENSCAFG00020009462) #18 ENSCAFG00020009466 ENSCAFG00020009468 #20 S100A11 (ENSCAFG00020009473) #21 S100A10 (ENSCAFG00020009496) #22 THEM4 (ENSCAFG00020009499) #23 ENSCAFG00020009502 #24 THEM5 (ENSCAFG00020009506) #25 RORC (ENSCAFG00020009513) #27 LINGO4 (ENSCAFG00020009599) #28 TDRKH (ENSCAFG00020009606) #29 OAZ3 (ENSCAFG00020009650) #30 ENSCAFG00020009687 #31 RIIAD1 (ENSCAFG00020009697) #33 CELF3 (ENSCAFG00020009731) #34 SNX27 (ENSCAFG00020009876) #35 TUFT1 (ENSCAFG00020010517) #36 ENSCAFG00020010534 #37 POGZ (ENSCAFG00020010728) PSMB4 (ENSCAFG00020012881) Red fox DUPLICATION Red fox MODERN SPECIES 176 ENSVVUG00000013725 #15 RPTN (ENSVVUG00000013723) #16 ENSVVUG00000013722 #17 TCHHL1 (ENSVVUG00000013717) #18 ENSVVUG00000013706 #20 ENSVVUG00000013702 #21 ENSVVUG00000013698 #22 THEM4 (ENSVVUG00000013687) #23 THEM5 (ENSVVUG00000013676) #25 RORC (ENSVVUG00000013598) #27 LINGO4 (ENSVVUG00000013594) #28 TDRKH (ENSVVUG00000013241) #29 OAZ3 (ENSVVUG00000013149) #30 MRPL9 (ENSVVUG00000013099) #31 ENSVVUG00000013087 #32 ENSVVUG00000013083 #33 CELF3 (ENSVVUG00000013080) #34 ENSVVUG00000013078 #34 SNX27 (ENSVVUG00000013003) #35 ENSVVUG00000012997 TUFT1 (ENSVVUG00000012985) #36 ENSVVUG00000012977 Red fox MODERN SPECIES 9 ERI3 (ENSVVUG00000007924) ENSVVUG00000007902 ENSVVUG00000007889 TMEM53 (ENSVVUG00000007884) ARMH1 (ENSVVUG00000007852) KIF2C (ENSVVUG00000007840) RPS8 (ENSVVUG00000007816) BEST4 (ENSVVUG00000007803) PLK3 (ENSVVUG00000007772) TCTEX1D4 (ENSVVUG00000007762) BTBD19 (ENSVVUG00000007755) PTCH2 (ENSVVUG00000007736) EIF2B3 (ENSVVUG00000007715) HECTD3 (ENSVVUG00000007695) UROD (ENSVVUG00000007661) ENSVVUG00000007648 #22 ZSWIM5 (ENSVVUG00000007508) MUTYH (ENSVVUG00000007482) TOE1 (ENSVVUG00000007469) TESK2 (ENSVVUG00000007462) CCDC163 (ENSVVUG00000007444) MMACHC (ENSVVUG00000007436) ENSVVUG00000007433 AKR1A1 (ENSVVUG00000007404) NASP (ENSVVUG00000007384) CCDC17 (ENSVVUG00000007358) GPBP1L1 (ENSVVUG00000007354) ENSVVUG00000007350 IPP (ENSVVUG00000007334) ENSVVUG00000007332 MAST2 (ENSVVUG00000007302) Canidae DUPLICATION Canidae ANCESTRAL SPECIES 35 ENSGT00530000063558.A ENSGT00530000063503.a.a ENSGT00940000157308 ENSGT00530000063907.d ENSGT00950000185406 ENSGT00530000063169.b.b ENSGT00390000010218.e.b ENSGT00900000141090 ENSGT00950000183105.A.m.a ENSGT00910000144283 ENSGT00950000182866.D.d.a.d ENSGT00940000153695.B ENSGT00940000156527 ENSGT00940000156881 ENSGT00940000156631.B ENSGT00940000154197.b.b.`b.a ##22 ENSGT00390000008948 ENSGT00940000158592 ENSGT00390000007697 ENSGT00390000006307 ENSGT00940000160318 ENSGT00940000153251.a ENSGT00940000161692 ENSGT00390000016177.f ENSGT00390000004910 ENSGT00940000162847 ENSGT00940000153998.a ENSGT00950000183224 ENSGT00390000004871.b.l ENSGT00390000004871.a ENSGT00410000029325 Canis_lupus ANCESTRAL SPECIES 31 ENSGT00530000063558.A ENSGT00530000063503.a.a ENSGT00940000157308 ENSGT00530000063907.d ENSGT00950000185406 ENSGT00530000063169.b.b ENSGT00390000010218.e.b ENSGT00900000141090 ENSGT00950000183105.A.m.a ENSGT00910000144283 ENSGT00950000182866.D.d.a.d ENSGT00940000153695.B ENSGT00940000156527 ENSGT00940000156881 ENSGT00940000156631.B ENSGT00940000154197.b.b.`b.a ##22 ENSGT00390000008948 ENSGT00940000158592 ENSGT00390000007697 ENSGT00390000006307 ENSGT00940000160318 ENSGT00940000153251.a ENSGT00940000161692 ENSGT00390000016177.f.a ENSGT00390000004910 ENSGT00940000162847 ENSGT00940000153998.a ENSGT00950000183224 ENSGT00390000004871.b.l ENSGT00390000004871.a ENSGT00410000029325 Dog MODERN SPECIES 26 ENSCAFG00845021152 ENSCAFG00845021173 ENSCAFG00845021216 TRMT10C (ENSCAFG00845021243) PCNP (ENSCAFG00845021277) ZBTB11 (ENSCAFG00845021345) RPL24 (ENSCAFG00845021526) CEP97 (ENSCAFG00845021636) NXPE3 (ENSCAFG00845021747) NFKBIZ (ENSCAFG00845021884) ZPLD1 (ENSCAFG00845022199) ENSCAFG00845022304 ALCAM (ENSCAFG00845022356) ENSCAFG00845022553 CBLB (ENSCAFG00845022767) ENSCAFG00845023207 ##22 CCDC54 (ENSCAFG00845023224) BBX (ENSCAFG00845023396) CD47 (ENSCAFG00845024257) IFT57 (ENSCAFG00845024514) MYH15 (ENSCAFG00845024820) CIP2A (ENSCAFG00845025731) DZIP3 (ENSCAFG00845026061) ENSCAFG00845026866 TRAT1 (ENSCAFG00845026944) GUCA1C (ENSCAFG00845027038) MORC1 (ENSCAFG00845027112) C33H3orf85 (ENSCAFG00845027239) ENSCAFG00845027272 ENSCAFG00845027408 NECTIN3 (ENSCAFG00845027455) Dingo MODERN SPECIES 65 ENSCAFG00020009217 SENP7 (ENSCAFG00020008889) ENSCAFG00020008867 ENSCAFG00020008864 TRMT10C (ENSCAFG00020008862) PCNP (ENSCAFG00020008846) ZBTB11 (ENSCAFG00020008835) RPL24 (ENSCAFG00020008829) CEP97 (ENSCAFG00020008805) NXPE3 (ENSCAFG00020008802) NFKBIZ (ENSCAFG00020008790) ZPLD1 (ENSCAFG00020008754) ENSCAFG00020008738 ALCAM (ENSCAFG00020008731) CBLB (ENSCAFG00020008526) ENSCAFG00020008488 ##22 CCDC54 (ENSCAFG00020008463) BBX (ENSCAFG00020008323) CD47 (ENSCAFG00020008300) IFT57 (ENSCAFG00020008287) MYH15 (ENSCAFG00020008254) CIP2A (ENSCAFG00020008089) DZIP3 (ENSCAFG00020007716) ENSCAFG00020007673 TRAT1 (ENSCAFG00020007659) GUCA1C (ENSCAFG00020007650) ENSCAFG00020007635 ENSCAFG00020007632 NECTIN3 (ENSCAFG00020007611) ZBED2 (ENSCAFG00020007603) CD96 (ENSCAFG00020007587) Red fox MODERN SPECIES 6 ENSVVUG00000021734 TRMT10C (ENSVVUG00000021735) PCNP (ENSVVUG00000021736) ZBTB11 (ENSVVUG00000021737) RPL24 (ENSVVUG00000021739) CEP97 (ENSVVUG00000021740) NXPE3 (ENSVVUG00000021743) NFKBIZ (ENSVVUG00000021744) ENSVVUG00000021747 ZPLD1 (ENSVVUG00000021754) ENSVVUG00000021771 ENSVVUG00000021772 ENSVVUG00000021773 ALCAM (ENSVVUG00000021774) CBLB (ENSVVUG00000021782) ENSVVUG00000021795 ##22 CCDC54 (ENSVVUG00000021808) BBX (ENSVVUG00000021813) CD47 (ENSVVUG00000021818) IFT57 (ENSVVUG00000021819) MYH15 (ENSVVUG00000021822) CIP2A (ENSVVUG00000021833) DZIP3 (ENSVVUG00000021904) RETNLB (ENSVVUG00000021917) TRAT1 (ENSVVUG00000021918) MORC1 (ENSVVUG00000021920) DPPA2 (ENSVVUG00000021923) ENSVVUG00000021925 ENSVVUG00000021931 ENSVVUG00000021935 NECTIN3 (ENSVVUG00000021940) Canidae ANCESTRAL SPECIES ENSGT00940000154197.b.b.`b.b ##22 Canis_lupus ANCESTRAL SPECIES 30 ENSGT00940000154197.b.b.`b.b ##22 ENSGT00940000155475 ENSGT00800000124172 ENSGT00530000064570.q ENSGT00940000156337 ENSGT00940000169764 ENSGT00950000183027.b ENSGT00950000183054.a.a.a ENSGT00950000182924.A.b.a.b ENSGT00550000075003 ENSGT00940000154451.k.b.b ENSGT00940000158131 ENSGT00940000160665 ENSGT00510000046470.a.a.a.d.b ENSGT00940000172584.c.b.a.a ENSGT01070000254361 Dingo MODERN SPECIES 308 ENSCAFG00020017950 ##22 PDE5A (ENSCAFG00020017554) FABP2 (ENSCAFG00020017519) ENSCAFG00020017515 USP53 (ENSCAFG00020017496) ENSCAFG00020017490 MYOZ2 (ENSCAFG00020017484) SYNPO2 (ENSCAFG00020017481) ENSCAFG00020017478 SEC24D (ENSCAFG00020017464) METTL14 (ENSCAFG00020017450) ENSCAFG00020017446 PRSS12 (ENSCAFG00020017432) NDST3 (ENSCAFG00020017398) TRAM1L1 (ENSCAFG00020017395) ENSCAFG00020017392 Dog MODERN SPECIES 25 ENSCAFG00845030376 ##22 PDE5A (ENSCAFG00845030199) FABP2 (ENSCAFG00845030144) ENSCAFG00845030125 USP53 (ENSCAFG00845030047) MYOZ2 (ENSCAFG00845030005) SYNPO2 (ENSCAFG00845029946) SEC24D (ENSCAFG00845029774) METTL14 (ENSCAFG00845029674) ENSCAFG00845029655 PRSS12 (ENSCAFG00845029625) NDST3 (ENSCAFG00845029512) TRAM1L1 (ENSCAFG00845029459) ENSCAFG00845029353 ENSCAFG00845029324 ENSCAFG00845029266 Caniformia_b DUPLICATION Caniformia_b DUPLICATION Caniformia_b ANCESTRAL SPECIES ENSGT00940000154197.b.b.y.a #22 Mustelinae ANCESTRAL SPECIES ENSGT00940000154197.b.b.y.a #22 American mink MODERN SPECIES 7 B4GALT5 (ENSNVIG00000007732) PTGIS (ENSNVIG00000007847) KCNB1 (ENSNVIG00000007882) ENSNVIG00000007903 ZNFX1 (ENSNVIG00000007977) DDX27 (ENSNVIG00000008022) STAU1 (ENSNVIG00000008091) XPO2 (ENSNVIG00000008329) ENSNVIG00000008477 ARFGEF2 (ENSNVIG00000008501) PREX1 (ENSNVIG00000008654) SULF2 (ENSNVIG00000008727) NCOA3 (ENSNVIG00000008834) ZMYND8 (ENSNVIG00000008911) EYA2 (ENSNVIG00000009193) ENSNVIG00000009316 #22 SLC2A10 (ENSNVIG00000009325) TP53RK (ENSNVIG00000009336) SLC13A3 (ENSNVIG00000009356) OCSTAMP (ENSNVIG00000009453) ENSNVIG00000009478 ENSNVIG00000009502 ELMO2 (ENSNVIG00000009522) SLC35C2 (ENSNVIG00000009604) CDH22 (ENSNVIG00000009638) TNR5 (ENSNVIG00000009676) NCOA5 (ENSNVIG00000009734) ENSNVIG00000009758 ENSNVIG00000009793 MMP9 (ENSNVIG00000009799) ZNF335 (ENSNVIG00000009815) Caniformia_b ANCESTRAL SPECIES 35 ENSGT00940000163019 ENSGT00940000163248 ENSGT00940000164168 ENSGT00440000039991 ENSGT00950000183301 ENSGT00730000111554 ENSGT00730000111580 #10 ENSGT00940000163905 ENSGT00940000162465 #12 ENSGT00940000154467.b.b.b #13 ENSGT00940000170498 ENSGT00940000154467.b.a #15 ENSGT00940000154467.a.i #16 ENSGT00940000162966 #18 ENSGT00940000154172 #21 ENSGT00940000154197.b.b.y.b #22 ENSGT00940000160047 #23 ENSGT00940000161937 #25 ENSGT00940000163537 #26 ENSGT00940000161521 #27 ENSGT00940000162157 #28 ENSGT00940000159364 #29 ENSGT00940000161581 #30 ENSGT00390000008281 #31 ENSGT00390000003062 #33 ENSGT00940000154716 #34 ENSGT00950000183212.C #35 ENSGT00950000183065.B #36 ENSGT00940000162698 #37 ENSGT00940000160649 ENSGT00390000000698 Mustelinae ANCESTRAL SPECIES 81 ENSGT00940000154467.b.a #15 ENSGT00940000154467.a.i #16 ENSGT00940000163983 #17 ENSGT00940000164620 ENSGT00940000162966 #18 ENSGT00940000154172 #21 ENSGT00940000154197.b.b.y.b #22 ENSGT00940000160047 #23 ENSGT00940000161937 #25 ENSGT00940000163537 #26 ENSGT00940000161521 #27 ENSGT00940000162157 #28 ENSGT00940000159364 #29 ENSGT00940000161581 #30 ENSGT00390000008281 #31 ENSGT00390000003062 #33 ENSGT00940000154716 #34 ENSGT00950000183212.C #35 ENSGT00950000183065.B #36 ENSGT00940000162698 #37 ENSGT00940000160649 ENSGT00390000000698 American mink MODERN SPECIES 316 ENSNVIG00000014136 #15 RPTN (ENSNVIG00000014147) #16 TCHHL1 (ENSNVIG00000014160) #18 S100A11 (ENSNVIG00000014167) #21 S100A10 (ENSNVIG00000014176) #22 THEM4 (ENSNVIG00000014185) #23 THEM5 (ENSNVIG00000014205) #25 C2CD4D (ENSNVIG00000014218) #26 RORG (ENSNVIG00000014222) #27 LINGO4 (ENSNVIG00000014264) #28 TDRKH (ENSNVIG00000014276) #29 OAZ3 (ENSNVIG00000014414) #30 MRPL9 (ENSNVIG00000014498) #31 RIIAD1 (ENSNVIG00000014540) #33 CELF3 (ENSNVIG00000014558) #34 SNX27 (ENSNVIG00000014632) #35 TUFT1 (ENSNVIG00000014726) #36 ENSNVIG00000014806 #37 POGZ (ENSNVIG00000014867) PSMB4 (ENSNVIG00000015080) Ursidae ANCESTRAL SPECIES ENSGT00940000163248 ENSGT00940000164168 ENSGT00440000039991 ENSGT00950000183301 ENSGT00730000111554 ENSGT00940000161842.b ENSGT00730000111580 #10 ENSGT00940000163905 ENSGT00940000162465 #12 ENSGT00940000154467.b.b.b #13 ENSGT00940000170498 ENSGT00940000154467.b.a #15 ENSGT00940000154467.a.i #16 ENSGT00940000162966 #18 ENSGT00940000154172.g.b #21 ENSGT00940000154197.b.b.y.b #22 ENSGT00940000160047 #23 ENSGT00940000161937 #25 ENSGT00940000161521 #27 ENSGT00940000162157 #28 ENSGT00940000159364 #29 ENSGT00940000161581 #30 ENSGT00390000008281 #31 ENSGT00390000003062 #33 ENSGT00940000154716 #34 ENSGT00950000183212.C #35 ENSGT00950000183065.B #36 ENSGT00940000162698 #37 ENSGT00940000160649 ENSGT00390000000698 ENSGT00390000014244 Ursus DUPLICATION Ursus ANCESTRAL SPECIES 5 ENSGT00390000012431 ENSGT00940000159994 ENSGT00950000182904.a.b.b ENSGT00390000012482 ENSGT00940000159489 ENSGT00390000015797.c.a ENSGT00940000161827 ENSGT00940000163613 ENSGT00940000159134 ENSGT00940000160489 ENSGT00940000160221 ENSGT00940000154929.B ENSGT01030000234558.D.b ENSGT00940000154149.b.b ENSGT00550000075110 ENSGT00940000154197.b.b.y.b.a #22 ENSGT00940000159323 ENSGT00940000161246 ENSGT00390000001907 ENSGT00940000160542 ENSGT00390000013782 ENSGT00390000006166 ENSGT00390000016851 ENSGT00940000157019 ENSGT00390000007029.j ENSGT00390000012240.i ENSGT00390000007336 ENSGT00510000049316 ENSGT00390000016934 ENSGT00530000063974.a ENSGT00940000160748 Polar bear MODERN SPECIES 255 PIK3R2 (ENSUMAG00000009514) MAST3 (ENSUMAG00000009640) IL12RB1 (ENSUMAG00000009832) ENSUMAG00000009844 ENSUMAG00000009850 CCDC124 (ENSUMAG00000009858) SLC5A5 (ENSUMAG00000009865) ENSUMAG00000009876 JAK3 (ENSUMAG00000009973) B3GNT3 (ENSUMAG00000010749) FCHO1 (ENSUMAG00000010837) MAP1S (ENSUMAG00000011311) ENSUMAG00000011373 NIBAN3 (ENSUMAG00000011737) PGLS (ENSUMAG00000011747) ENSUMAG00000011752 #22 SLC27A1 (ENSUMAG00000011769) ENSUMAG00000011774 MVB12A (ENSUMAG00000011781) ENSUMAG00000011787 PLVAP (ENSUMAG00000011789) ANO8 (ENSUMAG00000011803) ENSUMAG00000011835 ENSUMAG00000011843 ENSUMAG00000011847 ENSUMAG00000011853 ENSUMAG00000011855 BABAM1 (ENSUMAG00000011859) USHBP1 (ENSUMAG00000011869) ENSUMAG00000011885 ENSUMAG00000011888 American black bear MODERN SPECIES 994 MAP1S (ENSUAMG00000000342) ENSUAMG00000000381 COLGALT1 (ENSUAMG00000001248) NIBAN3 (ENSUAMG00000001413) PGLS (ENSUAMG00000001538) ENSUAMG00000001541 #22 SLC27A1 (ENSUAMG00000001548) NXNL1 (ENSUAMG00000001563) TMEM221 (ENSUAMG00000001572) MVB12A (ENSUAMG00000001586) ENSUAMG00000001590 Ursus ANCESTRAL SPECIES 18 ENSGT00390000002634.b ENSGT00940000153231.B ENSGT01100000263525.a.b.b.c.b ENSGT00950000185586 ENSGT00940000163248 ENSGT00940000164168 ENSGT00440000039991 ENSGT00730000111554 ENSGT00940000161842.b ENSGT00940000162465 #12 ENSGT00940000154467.b.b.b #13 ENSGT00940000154467.b.a #15 ENSGT00940000154467.a.i #16 ENSGT00940000162966 #18 ENSGT00940000154172.g.b #21 ENSGT00940000154197.b.b.y.b.b #22 ENSGT00940000160047 #23 ENSGT00940000161937 #25 ENSGT00940000161521 #27 ENSGT00940000162157 #28 ENSGT00940000159364 #29 ENSGT00940000161581 #30 ENSGT00390000008281 #31 ENSGT00390000003062 #33 ENSGT00940000154716 #34 ENSGT00950000183212.C #35 ENSGT00950000183065.B #36 ENSGT00940000162698 #37 ENSGT00940000160649 ENSGT00390000000698 ENSGT00390000014244.bb Polar bear MODERN SPECIES 193 ENSUMAG00000001108 PGLYRP4 (ENSUMAG00000001126) PGLYRP3 (ENSUMAG00000001171) ENSUMAG00000001191 ENSUMAG00000001205 ENSUMAG00000001215 ENSUMAG00000001231 SMCP (ENSUMAG00000001235) ENSUMAG00000001281 ENSUMAG00000001292 #12 ENSUMAG00000001308 #13 ENSUMAG00000001321 #15 ENSUMAG00000001326 #16 TCHHL1 (ENSUMAG00000001361) #18 S100A11 (ENSUMAG00000001371) #21 ENSUMAG00000001376 #22 THEM4 (ENSUMAG00000001386) #23 THEM5 (ENSUMAG00000001423) #25 RORC (ENSUMAG00000001429) #27 LINGO4 (ENSUMAG00000001441) #28 TDRKH (ENSUMAG00000001456) #29 OAZ3 (ENSUMAG00000001672) #30 MRPL9 (ENSUMAG00000001723) #31 ENSUMAG00000001727 RIIAD1 (ENSUMAG00000001735) #33 CELF3 (ENSUMAG00000001772) #34 SNX27 (ENSUMAG00000001910) #35 TUFT1 (ENSUMAG00000002225) #36 ENSUMAG00000002267 #37 POGZ (ENSUMAG00000002469) PSMB4 (ENSUMAG00000002476) Giant Panda MODERN SPECIES 11 ENSAMEG00000025202 SMCP (ENSAMEG00000019350) ENSAMEG00000027287 ENSAMEG00000027951 ENSAMEG00000011369 ENSAMEG00000028140 C1orf68 (ENSAMEG00000023884) #10 ENSAMEG00000028600 ENSAMEG00000025755 #12 ENSAMEG00000028230 #13 ENSAMEG00000029891 ENSAMEG00000024220 #15 RPTN (ENSAMEG00000028886) #16 TCHHL1 (ENSAMEG00000004225) #18 ENSAMEG00000030837 #21 S100A10 (ENSAMEG00000000350) #22 THEM4 (ENSAMEG00000000355) #23 THEM5 (ENSAMEG00000000361) #25 RORC (ENSAMEG00000000363) #27 LINGO4 (ENSAMEG00000019097) #28 TDRKH (ENSAMEG00000000421) #29 OAZ3 (ENSAMEG00000000484) #30 ENSAMEG00000000491 #31 RIIAD1 (ENSAMEG00000029312) #33 CELF3 (ENSAMEG00000000509) #34 SNX27 (ENSAMEG00000000540) #35 TUFT1 (ENSAMEG00000000574) #36 ENSAMEG00000000601 #37 POGZ (ENSAMEG00000000622) PSMB4 (ENSAMEG00000000645) SELENBP1 (ENSAMEG00000000659) Caniformia_b ANCESTRAL SPECIES ENSGT00940000154197.b.b.z #22 Mustelinae ANCESTRAL SPECIES ENSGT00940000154197.b.b.z #22 Ferret DUPLICATION Ferret MODERN SPECIES 398 ENSMPUG00000003475 #14 ENSMPUG00000003479 ENSMPUG00000003481 #15 ENSMPUG00000003484 #16 ENSMPUG00000003490 #17 ENSMPUG00000003496 TCHHL1 (ENSMPUG00000003502) #18 ENSMPUG00000003509 #21 ENSMPUG00000003517 #22 ENSMPUG00000003526 #23 THEM5 (ENSMPUG00000003530) #25 ENSMPUG00000003542 RORC (ENSMPUG00000003550) #27 LINGO4 (ENSMPUG00000018420) #28 TDRKH (ENSMPUG00000003558) #29 OAZ3 (ENSMPUG00000003571) #30 MRPL9 (ENSMPUG00000003590) #31 RIIAD1 (ENSMPUG00000003602) #33 CELF3 (ENSMPUG00000003617) #34 SNX27 (ENSMPUG00000003631) #35 TUFT1 (ENSMPUG00000003694) #36 ENSMPUG00000003701 #37 ENSMPUG00000003710 POGZ (ENSMPUG00000003718) Ferret MODERN SPECIES 300 TGS1 (ENSMPUG00000010475) TMEM68 (ENSMPUG00000010480) ENSMPUG00000010486 ENSMPUG00000010493 RP1 (ENSMPUG00000010497) SOX17 (ENSMPUG00000010506) ENSMPUG00000010510 ENSMPUG00000010523 ENSMPUG00000018368 ENSMPUG00000010533 LYPLA1 (ENSMPUG00000010559) ENSMPUG00000010596 TCEA1 (ENSMPUG00000010602) RGS20 (ENSMPUG00000010644) ATP6V1H (ENSMPUG00000010647) ENSMPUG00000018369 #22 OPRK1 (ENSMPUG00000010654) Ursidae ANCESTRAL SPECIES ENSGT00940000154197.b.b.z #22 Giant Panda DUPLICATION Giant Panda DUPLICATION Giant Panda MODERN SPECIES 1314 ENSAMEG00000025466 #22 Giant Panda MODERN SPECIES 1148 ENSAMEG00000031345 #22 Giant Panda MODERN SPECIES 1290 ENSAMEG00000026724 #22 Felidae ANCESTRAL SPECIES 10 ENSGT00780000122937 ENSGT00950000183301 ENSGT00730000111554 ENSGT00730000111580 #10 ENSGT00940000163905 ENSGT00730000113097 #11 ENSGT00940000161842.a ENSGT00940000162465 #12 ENSGT00940000154467.b.b.b #13 ENSGT00940000154467.a.h.a ##13 ENSGT00940000154467.b.a #15 ENSGT00940000154467.a.i #16 ENSGT00940000163983 #17 ENSGT00940000162966 #18 ENSGT00940000154172 #21 ENSGT00940000154197.b.b #22 ENSGT00940000160047 #23 ENSGT00940000161937 #25 ENSGT00940000163537 #26 ENSGT00940000161521 #27 ENSGT00940000162157 #28 ENSGT00940000159364 #29 ENSGT00940000161581 #30 ENSGT00390000008281 #31 ENSGT00390000003062 #33 ENSGT00940000154716 #34 ENSGT00950000183212.C #35 ENSGT00950000183065.B #36 ENSGT00940000154489.B ENSGT00940000162698 #37 ENSGT00940000160649 Panthera ANCESTRAL SPECIES 40 ENSGT00780000122937 ENSGT00950000183301 ENSGT00730000111554 ENSGT00730000111580 #10 ENSGT00940000163905.e ENSGT00940000163905.f ENSGT00730000113097 #11 ENSGT00940000161842.a ENSGT00940000162465 #12 ENSGT00940000154467.b.b.b #13 ENSGT00940000154467.b.a #15 ENSGT00940000154467.a.i #16 ENSGT00940000163983 #17 ENSGT00940000162966 #18 ENSGT00940000154172 #21 ENSGT00940000154197.b.b #22 ENSGT00940000160047 #23 ENSGT00940000161937 #25 ENSGT00940000163537 #26 ENSGT00940000161521 #27 ENSGT00940000162157 #28 ENSGT00940000159364 #29 ENSGT00940000161581 #30 ENSGT00390000008281 #31 ENSGT00390000003062 #33 ENSGT00940000154716 #34 ENSGT00950000183212.C #35 ENSGT00950000183065.B #36 ENSGT00940000154489.B ENSGT00940000162698 #37 ENSGT00940000160649 Tiger MODERN SPECIES 275 ENSPTIG00000006961 ENSPTIG00000006953 ENSPTIG00000006948 ENSPTIG00000006897 C1orf68 (ENSPTIG00000006854) #10 ENSPTIG00000006839 ENSPTIG00000006837 LCE5A (ENSPTIG00000006817) CRNN (ENSPTIG00000015000) #12 ENSPTIG00000014745 #13 RPTN (ENSPTIG00000013862) #16 TCHHL1 (ENSPTIG00000013468) #18 S100A11 (ENSPTIG00000012739) #21 S100A10 (ENSPTIG00000012263) #22 THEM4 (ENSPTIG00000011246) #23 THEM5 (ENSPTIG00000010208) #25 RORC (ENSPTIG00000008094) #27 LINGO4 (ENSPTIG00000006738) #28 TDRKH (ENSPTIG00000019916) #29 OAZ3 (ENSPTIG00000018493) #30 MRPL9 (ENSPTIG00000017020) #31 ENSPTIG00000016080 CELF3 (ENSPTIG00000013450) #34 SNX27 (ENSPTIG00000011081) #35 TUFT1 (ENSPTIG00000007975) #36 ENSPTIG00000006973 #37 POGZ (ENSPTIG00000020597) PSMB4 (ENSPTIG00000019518) SELENBP1 (ENSPTIG00000016772) Panthera_a ANCESTRAL SPECIES 38 ENSGT00940000163905.e ENSGT00940000163905.f ENSGT00730000113097 #11 ENSGT00940000161842.a ENSGT00940000162465 #12 ENSGT00940000154467.b.b.b #13 ENSGT00940000154467.b.a #15 ENSGT00940000154467.a.i #16 ENSGT00940000163983 #17 ENSGT00940000162966 #18 ENSGT00940000154172 #21 ENSGT00940000154197.b.b #22 ENSGT00940000160047 #23 ENSGT00940000161937 #25 ENSGT00940000163537 #26 ENSGT00940000161521 #27 ENSGT00940000162157 #28 ENSGT00940000159364 #29 ENSGT00940000161581 #30 ENSGT00390000008281 #31 ENSGT00390000003062 #33 ENSGT00940000154716 #34 ENSGT00950000183212.C #35 ENSGT00950000183065.B #36 ENSGT00940000154489.B ENSGT00940000160649 ENSGT00390000000698 lion MODERN SPECIES 8 WARS2 (ENSPLOG00000011821) HAO2 (ENSPLOG00000011694) ENSPLOG00000011592 ZNF697 (ENSPLOG00000011563) PHGDH (ENSPLOG00000011111) HMGCS2 (ENSPLOG00000010925) REG4 (ENSPLOG00000010847) NOTCH2 (ENSPLOG00000010680) SEC22B (ENSPLOG00000010603) PDE4DIP (ENSPLOG00000009882) ENSPLOG00000009717 #15 RPTN (ENSPLOG00000009684) #16 ENSPLOG00000009645 #17 TCHHL1 (ENSPLOG00000009612) #18 ENSPLOG00000009583 #21 S100A10 (ENSPLOG00000009560) #22 THEM4 (ENSPLOG00000009530) #23 THEM5 (ENSPLOG00000009488) #25 C2CD4D (ENSPLOG00000009475) #26 RORC (ENSPLOG00000009361) #27 LINGO4 (ENSPLOG00000009326) #28 TDRKH (ENSPLOG00000009153) #29 OAZ3 (ENSPLOG00000008964) #30 MRPL9 (ENSPLOG00000008857) #31 RIIAD1 (ENSPLOG00000008817) #33 CELF3 (ENSPLOG00000008678) #34 SNX27 (ENSPLOG00000008397) #35 TUFT1 (ENSPLOG00000008146) #36 CGN (ENSPLOG00000007937) POGZ (ENSPLOG00000007770) PSMB4 (ENSPLOG00000007693) leopard MODERN SPECIES 149 ENSPPRG00000022177 ENSPPRG00000022208 CRCT1 (ENSPPRG00000022224) #11 LCE5A (ENSPPRG00000013328) CRNN (ENSPPRG00000013371) #12 ENSPPRG00000016115 #13 RPTN (ENSPPRG00000016821) #16 ENSPPRG00000023830 #21 S100A10 (ENSPPRG00000023731) #22 THEM4 (ENSPPRG00000023499) #23 THEM5 (ENSPPRG00000023321) #25 C2CD4D (ENSPPRG00000022384) #26 RORC (ENSPPRG00000000165) #27 LINGO4 (ENSPPRG00000022395) #28 TDRKH (ENSPPRG00000001585) #29 OAZ3 (ENSPPRG00000002633) #30 MRPL9 (ENSPPRG00000003556) #31 RIIAD1 (ENSPPRG00000003657) #33 CELF3 (ENSPPRG00000004600) #34 SNX27 (ENSPPRG00000012629) #35 TUFT1 (ENSPPRG00000020942) #36 CGN (ENSPPRG00000024471) POGZ (ENSPPRG00000023722) PSMB4 (ENSPPRG00000023427) Cat MODERN SPECIES 239 KPRP (ENSFCAG00000039269) ENSFCAG00000034900 C1orf68 (ENSFCAG00000036698) #10 ENSFCAG00000040599 LCE3B (ENSFCAG00000045888) ENSFCAG00000044273 CRNN (ENSFCAG00000045642) #12 ENSFCAG00000044571 #13 ENSFCAG00000053766 ##13 HRNR (ENSFCAG00000049092) #15 ENSFCAG00000048765 RPTN (ENSFCAG00000040577) #16 ENSFCAG00000045818 #17 TCHHL1 (ENSFCAG00000046571) #18 ENSFCAG00000041899 #21 S100A10 (ENSFCAG00000010423) #22 THEM4 (ENSFCAG00000003443) #23 THEM5 (ENSFCAG00000010981) #25 C2CD4D (ENSFCAG00000026060) #26 RORC (ENSFCAG00000018105) #27 LINGO4 (ENSFCAG00000010784) #28 TDRKH (ENSFCAG00000010980) #29 OAZ3 (ENSFCAG00000010979) #30 MRPL9 (ENSFCAG00000043355) #31 RIIAD1 (ENSFCAG00000019369) #33 CELF3 (ENSFCAG00000007908) #34 SNX27 (ENSFCAG00000041414) #35 TUFT1 (ENSFCAG00000004073) #36 CGN (ENSFCAG00000004072) #37 POGZ (ENSFCAG00000001864) PSMB4 (ENSFCAG00000001861) Laurasiatheria_c ANCESTRAL SPECIES ENSGT00780000122937 ENSGT00730000111554 ENSGT00940000161842.b ENSGT00730000111580 #10 ENSGT00940000163498 ENSGT00940000165404 ENSGT00940000163905 ENSGT00940000162465 #12 ENSGT00940000154467.b.b.b #13 ENSGT00940000170498 ENSGT00940000154467.b.a #15 ENSGT00940000154467.a.i #16 ENSGT00940000163983 #17 ENSGT00940000162966 #18 ENSGT00940000154172 #21 ENSGT00940000154197.b.b #22 ENSGT00940000160047 #23 ENSGT00940000161937 #25 ENSGT00940000163537 #26 ENSGT00940000161521 #27 ENSGT00940000162157 #28 ENSGT00940000159364 #29 ENSGT00940000161581 #30 ENSGT00390000008281 #31 ENSGT00390000003062 #33 ENSGT00940000154716 #34 ENSGT00950000183212.C #35 ENSGT00950000183065.B #36 ENSGT00940000162698 #37 ENSGT00940000160649 ENSGT00390000000698 Equus ANCESTRAL SPECIES 3 ENSGT00940000161842.b.m ENSGT00940000161842.b.n.b ENSGT00940000161842.b.n.a.b ENSGT00940000161842.b.n.a.a ENSGT00940000163498 ENSGT00940000165404 ENSGT00940000163905 ENSGT00940000162465 #12 ENSGT00940000154467.b.b.b #13 ENSGT00940000170498 ENSGT00940000154467.b.a #15 ENSGT00940000154467.a.i #16 ENSGT00940000163983 #17 ENSGT00940000162966 #18 ENSGT00940000154172 #21 ENSGT00940000154197.b.b #22 ENSGT00940000160047 #23 ENSGT00940000161937 #25 ENSGT00940000163537 #26 ENSGT00940000161521 #27 ENSGT00940000162157 #28 ENSGT00940000159364 #29 ENSGT00940000161581 #30 ENSGT00390000008281 #31 ENSGT00390000003062 #33 ENSGT00940000154716 #34 ENSGT00950000183212.C #35 ENSGT00950000183065.B #36 ENSGT00940000162698 #37 ENSGT00390000004322.a.a.f ENSGT00940000160649 Horse MODERN SPECIES 26 LCE4A (ENSECAG00000042459) ENSECAG00000041350 ENSECAG00000037218 ENSECAG00000050655 ENSECAG00000054891 LCE3B (ENSECAG00000042522) ENSECAG00000041610 ENSECAG00000043314 ENSECAG00000044665 CRNN (ENSECAG00000017658) #12 ENSECAG00000028110 #13 ENSECAG00000058901 #15 ENSECAG00000037094 #16 TCHHL1 (ENSECAG00000034035) #18 S100A11 (ENSECAG00000019069) #21 S100A10 (ENSECAG00000019382) #22 THEM4 (ENSECAG00000020127) #23 THEM5 (ENSECAG00000020807) #25 C2CD4D (ENSECAG00000028243) #26 RORC (ENSECAG00000000918) #27 LINGO4 (ENSECAG00000012494) #28 TDRKH (ENSECAG00000013096) #29 OAZ3 (ENSECAG00000015002) #30 MRPL9 (ENSECAG00000016263) #31 CELF3 (ENSECAG00000020365) #34 SNX27 (ENSECAG00000000614) #35 TUFT1 (ENSECAG00000011044) #36 CGN (ENSECAG00000015048) #37 ENSECAG00000039248 POGZ (ENSECAG00000021579) PSMB4 (ENSECAG00000006692) Donkey MODERN SPECIES 17 ENSEASG00005038825 ENSEASG00005033840 LCE3B (ENSEASG00005028563) ENSEASG00005025890 ENSEASG00005037661 ENSEASG00005037749 #12 ENSEASG00005029775 #13 ENSEASG00005035420 #16 ENSEASG00005023707 ENSEASG00005032937 #15 RPTN (ENSEASG00005037477) #16 ENSEASG00005035273 #17 ENSEASG00005031187 #17 TCHHL1 (ENSEASG00005005183) #18 ENSEASG00005005188 #21 ENSEASG00005028682 #22 ENSEASG00005005198 #23 RORC (ENSEASG00005005204) #27 LINGO4 (ENSEASG00005031153) #28 TDRKH (ENSEASG00005005213) #29 OAZ3 (ENSEASG00005005219) #30 MRPL9 (ENSEASG00005030204) #31 RIIAD1 (ENSEASG00005031539) #33 CELF3 (ENSEASG00005005254) #34 SNX27 (ENSEASG00005005260) #35 TUFT1 (ENSEASG00005005295) #36 ENSEASG00005005590 #37 ENSEASG00005005594 POGZ (ENSEASG00005005607) ENSEASG00005005615 ENSEASG00005024206 Chiroptera ANCESTRAL SPECIES 20 ENSGT00940000163019 ENSGT00730000111626 ENSGT01050000246051 ENSGT00780000122937 ENSGT00730000111554 ENSGT00940000161842.b ENSGT00730000111580 #10 ENSGT00940000162465 #12 ENSGT00940000154467.b.b.b #13 ENSGT00940000170498 ENSGT00940000154467.b.a #15 ENSGT00940000154467.a.i #16 ENSGT00940000163983 #17 ENSGT00940000162966 #18 ENSGT00940000154172 #21 ENSGT00940000154197.b.b #22 ENSGT00940000160047 #23 ENSGT00940000161937 #25 ENSGT00940000163537 #26 ENSGT00940000161521 #27 ENSGT00940000162157 #28 ENSGT00940000159364 #29 ENSGT00940000161581 #30 ENSGT00390000008281 #31 ENSGT00390000003062 #33 ENSGT00940000154716 #34 ENSGT00950000183212.C #35 ENSGT00950000183065.B #36 ENSGT00940000162698 #37 ENSGT00940000160649 ENSGT00390000000698 Megabat MODERN SPECIES 5628 S100A10 (ENSPVAG00000015664) #22 Microchiroptera ANCESTRAL SPECIES 21 ENSGT00730000111626 ENSGT01050000246051 ENSGT00780000122937 ENSGT00730000111554 ENSGT00940000161842.b ENSGT00730000111580 #10 ENSGT00940000162465 #12 ENSGT00940000154467.b.b.b #13 ENSGT00940000170498 ENSGT00940000154467.b.a #15 ENSGT00940000154467.a.i #16 ENSGT00940000164620 ENSGT00940000163983 #17 ENSGT00940000162966 #18 ENSGT00940000154172 #21 ENSGT00940000154197.b.b #22 ENSGT00940000160047 #23 ENSGT00940000161937 #25 ENSGT00940000163537 #26 ENSGT00940000161521 #27 ENSGT00940000162157 #28 ENSGT00940000159364 #29 ENSGT00940000161581 #30 ENSGT00390000008281 #31 ENSGT00390000003062 #33 ENSGT00940000154716 #34 ENSGT00950000183212.C #35 ENSGT00950000183065.B #36 ENSGT00940000162698 #37 ENSGT00940000160649 ENSGT00390000000698 Microbat DUPLICATION Microbat MODERN SPECIES 943 PNPT1 (ENSMLUG00000003886) EFEMP1 (ENSMLUG00000003898) CCDC85A (ENSMLUG00000007767) VRK2 (ENSMLUG00000002069) FANCL (ENSMLUG00000002077) BCL11A (ENSMLUG00000010117) ENSMLUG00000030390 ENSMLUG00000014903 PAPOLG (ENSMLUG00000009853) REL (ENSMLUG00000007454) PUS10 (ENSMLUG00000000082) PEX13 (ENSMLUG00000025131) SANBR (ENSMLUG00000007627) C2orf74 (ENSMLUG00000027969) ENSMLUG00000003408 ENSMLUG00000027445 #22 USP34 (ENSMLUG00000003414) XPO1 (ENSMLUG00000010670) FAM161A (ENSMLUG00000030514) CCT4 (ENSMLUG00000016138) ENSMLUG00000022697 B3GNT2 (ENSMLUG00000009924) ENSMLUG00000027762 EHBP1 (ENSMLUG00000002314) OTX1 (ENSMLUG00000002330) WDPCP (ENSMLUG00000002336) MDH1 (ENSMLUG00000002352) UGP2 (ENSMLUG00000003123) VPS54 (ENSMLUG00000003130) PELI1 (ENSMLUG00000003152) ENSMLUG00000015944 Microbat DUPLICATION Microbat MODERN SPECIES 1088 ENSMLUG00000027933 ENSMLUG00000013964 ENSMLUG00000013963 ENSMLUG00000028866 SPRR4 (ENSMLUG00000013961) ENSMLUG00000002265 LCE3B (ENSMLUG00000002269) ENSMLUG00000025940 CRNN (ENSMLUG00000008478) #12 ENSMLUG00000022674 #15 RPTN (ENSMLUG00000029225) #16 ENSMLUG00000029417 ENSMLUG00000013906 TCHHL1 (ENSMLUG00000013899) #18 ENSMLUG00000014653 #21 ENSMLUG00000005271 #22 ENSMLUG00000027648 #23 THEM5 (ENSMLUG00000002239) #25 RORC (ENSMLUG00000029229) #27 LINGO4 (ENSMLUG00000002233) #28 TDRKH (ENSMLUG00000002213) #29 OAZ3 (ENSMLUG00000002207) #30 MRPL9 (ENSMLUG00000002204) #31 RIIAD1 (ENSMLUG00000029408) #33 CELF3 (ENSMLUG00000002193) #34 SNX27 (ENSMLUG00000002189) #35 TUFT1 (ENSMLUG00000002177) #36 ENSMLUG00000002171 #37 POGZ (ENSMLUG00000002157) PSMB4 (ENSMLUG00000002149) ENSMLUG00000015228 Microbat MODERN SPECIES 942 HOXD13 (ENSMLUG00000006997) HOXD12 (ENSMLUG00000007009) HOXD11 (ENSMLUG00000007030) HOXD10 (ENSMLUG00000007048) HOXD8 (ENSMLUG00000028864) HOXD4 (ENSMLUG00000012508) HOXD3 (ENSMLUG00000012510) ENSMLUG00000029447 MTX2 (ENSMLUG00000015966) ENSMLUG00000003906 NFE2L2 (ENSMLUG00000003909) ENSMLUG00000025480 AGPS (ENSMLUG00000005113) ENSMLUG00000005126 ENSMLUG00000005133 ENSMLUG00000028755 #22 PDE11A (ENSMLUG00000005135) RBM45 (ENSMLUG00000005782) OSBPL6 (ENSMLUG00000005787) ENSMLUG00000022423 ENSMLUG00000005810 PJVK (ENSMLUG00000005814) FKBP7 (ENSMLUG00000005816) PLEKHA3 (ENSMLUG00000005823) ENSMLUG00000024664 TTN (ENSMLUG00000005832) ENSMLUG00000005976 ENSMLUG00000027856 SESTD1 (ENSMLUG00000005032) ZNF385B (ENSMLUG00000013424) ENSMLUG00000013437 Greater horseshoe bat DUPLICATION Greater horseshoe bat DUPLICATION Greater horseshoe bat DUPLICATION Greater horseshoe bat MODERN SPECIES 14 ENSRFEG00010013856 ENSRFEG00010013832 SPRR4 (ENSRFEG00010013804) ENSRFEG00010013574 LCE7A (ENSRFEG00010013553) KPRP (ENSRFEG00010013203) ENSRFEG00010013183 C1orf68 (ENSRFEG00010013146) #10 CRNN (ENSRFEG00010012881) #12 ENSRFEG00010012690 #13 ENSRFEG00010012520 ENSRFEG00010012460 #15 ENSRFEG00010012428 #17 ENSRFEG00010012331 #18 ENSRFEG00010012269 #21 ENSRFEG00010012237 #22 ENSRFEG00010012107 #23 THEM5 (ENSRFEG00010012018) #25 C2CD4D (ENSRFEG00010011998) #26 RORC (ENSRFEG00010011901) #27 LINGO4 (ENSRFEG00010011864) #28 TDRKH (ENSRFEG00010011740) #29 OAZ3 (ENSRFEG00010011457) #30 MRPL9 (ENSRFEG00010011321) #31 RIIAD1 (ENSRFEG00010011257) #33 CELF3 (ENSRFEG00010011151) #34 SNX27 (ENSRFEG00010010910) #35 TUFT1 (ENSRFEG00010010800) #36 ENSRFEG00010010693 #37 POGZ (ENSRFEG00010021734) PSMB4 (ENSRFEG00010021721) Greater horseshoe bat MODERN SPECIES 18 TFEC (ENSRFEG00010019376) ENSRFEG00010019318 TES (ENSRFEG00010019300) CAV2 (ENSRFEG00010019273) CAV1 (ENSRFEG00010019224) MET (ENSRFEG00010019152) CAPZA2 (ENSRFEG00010019032) ST7 (ENSRFEG00010018747) WNT2 (ENSRFEG00010018681) ASZ1 (ENSRFEG00010018560) ENSRFEG00010018517 CFTR (ENSRFEG00010017672) CTTNBP2 (ENSRFEG00010017601) ENSRFEG00010017515 ENSRFEG00010017376 ENSRFEG00010017356 #22 ENSRFEG00010017340 KCND2 (ENSRFEG00010017250) TSPAN12 (ENSRFEG00010017208) ING3 (ENSRFEG00010017054) CPED1 (ENSRFEG00010016992) WNT16 (ENSRFEG00010016926) FAM3C (ENSRFEG00010016879) PTPRZ1 (ENSRFEG00010016626) AASS (ENSRFEG00010016545) FEZF1 (ENSRFEG00010016383) RNF133 (ENSRFEG00010016316) CADPS2 (ENSRFEG00010015967) TAS2R16 (ENSRFEG00010015907) SLC13A1 (ENSRFEG00010015742) IQUB (ENSRFEG00010015538) Greater horseshoe bat MODERN SPECIES ENSRFEG00010000327 LDOC1 (ENSRFEG00010000336) ENSRFEG00010000341 ENSRFEG00010000355 SOX3 (ENSRFEG00010000375) ENSRFEG00010000377 ENSRFEG00010000393 ENSRFEG00010000406 ATP11C (ENSRFEG00010000515) MCF2 (ENSRFEG00010000754) ENSRFEG00010000918 F9 (ENSRFEG00010000937) ENSRFEG00010001019 ENSRFEG00010001096 ENSRFEG00010001105 ENSRFEG00010001121 #22 ENSRFEG00010001128 ENSRFEG00010001132 ENSRFEG00010001156 ENSRFEG00010001177 ZIC3 (ENSRFEG00010001203) ENSRFEG00010001257 GPR101 (ENSRFEG00010001272) ENSRFEG00010001291 ENSRFEG00010001316 RBMX (ENSRFEG00010001354) ARHGEF6 (ENSRFEG00010001444) CD40LG (ENSRFEG00010001594) VGLL1 (ENSRFEG00010001625) ENSRFEG00010001638 ENSRFEG00010001656 Greater horseshoe bat MODERN SPECIES 2 PDHX (ENSRFEG00010004865) CD44 (ENSRFEG00010004816) SLC1A2 (ENSRFEG00010004715) PAMR1 (ENSRFEG00010004646) FJX1 (ENSRFEG00010004625) TRIM44 (ENSRFEG00010004609) LDLRAD3 (ENSRFEG00010004588) COMMD9 (ENSRFEG00010004551) PRR5L (ENSRFEG00010004515) TRAF6 (ENSRFEG00010004489) RAG1 (ENSRFEG00010004482) RAG2 (ENSRFEG00010004473) ENSRFEG00010004464 IFTAP (ENSRFEG00010004417) ENSRFEG00010004383 ENSRFEG00010004372 #22 ENSRFEG00010004357 LRRC4C (ENSRFEG00010004345) ENSRFEG00010004319 ENSRFEG00010004309 API5 (ENSRFEG00010004247) TTC17 (ENSRFEG00010004131) HSD17B12 (ENSRFEG00010004074) ALKBH3 (ENSRFEG00010004046) C11orf96 (ENSRFEG00010004030) ACCSL (ENSRFEG00010004009) ACCS (ENSRFEG00010003969) EXT2 (ENSRFEG00010003919) ALX4 (ENSRFEG00010003877) CD82 (ENSRFEG00010003839) TSPAN18 (ENSRFEG00010003813) Artiodactyla ANCESTRAL SPECIES ENSGT00940000165404 ENSGT00940000163905 ENSGT00940000163498 ENSGT00730000113097 #11 ENSGT00940000161842.a ENSGT00940000162465 #12 ENSGT00940000154467.b.b.b #13 ENSGT00940000154467.b.b.a #14 ENSGT00940000154467.a.h.a ##13 ENSGT00940000154467.b.a #15 ENSGT00940000154467.a.h.b ##13 ENSGT00940000154467.a.i #16 ENSGT00940000163983 #17 ENSGT00940000162966 #18 ENSGT00940000154172 #21 ENSGT00940000154197.b.b #22 ENSGT00940000160047 #23 ENSGT00940000161937 #25 ENSGT00940000163537 #26 ENSGT00940000161521 #27 ENSGT00940000162157 #28 ENSGT00940000159364 #29 ENSGT00940000161581 #30 ENSGT00390000008281 #31 ENSGT00390000003062 #33 ENSGT00940000154716 #34 ENSGT00950000183212.C #35 ENSGT00950000183065.B #36 ENSGT00940000162698 #37 ENSGT00940000160649 ENSGT00390000000698 Suina ANCESTRAL SPECIES 8 ENSGT00940000166289 ENSGT00950000183301 ENSGT00730000111554 ENSGT00730000111580 #10 ENSGT00940000161842.a ENSGT00940000165404 ENSGT00940000163905 ENSGT00940000163498 ENSGT00730000113097 #11 ENSGT00940000162465 #12 ENSGT00940000154467.b.b.b #13 ENSGT00940000154467.a.i #16 ENSGT00940000163983 #17 ENSGT00940000162966 #18 ENSGT00940000154172 #21 ENSGT00940000154197.b.b #22 ENSGT00940000160047 #23 ENSGT00940000161937 #25 ENSGT00940000163537 #26 ENSGT00940000161521 #27 ENSGT00940000162157 #28 ENSGT00940000159364 #29 ENSGT00940000161581 #30 ENSGT00390000008281 #31 ENSGT00390000003062 #33 ENSGT00940000154716 #34 ENSGT00950000183212.C #35 ENSGT00950000183065.B #36 ENSGT00940000154489.B ENSGT00940000162698 #37 ENSGT00940000160649 Chacoan peccary MODERN SPECIES 29 SMCP (ENSCWAG00000002916) LCE7A (ENSCWAG00000002921) LCE1A (ENSCWAG00000002932) ENSCWAG00000002940 KPRP (ENSCWAG00000002949) C1orf68 (ENSCWAG00000002953) #10 ENSCWAG00000002958 ENSCWAG00000002982 #12 ENSCWAG00000002990 #13 ENSCWAG00000003000 #13 RPTN (ENSCWAG00000003036) #16 ENSCWAG00000003046 #17 TCHHL1 (ENSCWAG00000003058) #18 ENSCWAG00000003065 S100A11 (ENSCWAG00000003075) #21 S100A10 (ENSCWAG00000003083) #22 THEM5 (ENSCWAG00000003108) #25 C2CD4D (ENSCWAG00000003120) #26 RORC (ENSCWAG00000003140) #27 LINGO4 (ENSCWAG00000005108) #28 TDRKH (ENSCWAG00000005128) #29 OAZ3 (ENSCWAG00000005285) #30 MRPL9 (ENSCWAG00000005339) #31 RIIAD1 (ENSCWAG00000005371) #33 CELF3 (ENSCWAG00000005407) #34 SNX27 (ENSCWAG00000005517) #35 TUFT1 (ENSCWAG00000005625) #36 CGN (ENSCWAG00000005751) POGZ (ENSCWAG00000005868) PSMB4 (ENSCWAG00000006120) SELENBP1 (ENSCWAG00000006161) Pig MODERN SPECIES 12 LCE5A (ENSSSCG00000040878) ENSSSCG00000053408 LCE3B (ENSSSCG00000061182) ENSSSCG00000051890 ENSSSCG00000053487 CRCT1 (ENSSSCG00000044768) #11 CRNN (ENSSSCG00000006604) #12 ENSSSCG00000042564 #13 ENSSSCG00000030031 ENSSSCG00000054200 ENSSSCG00000044041 ##13 ENSSSCG00000006605 #16 ENSSSCG00000038121 #17 TCHHL1 (ENSSSCG00000006609) #18 S100A11 (ENSSSCG00000006610) #21 S100A10 (ENSSSCG00000006612) #22 ENSSSCG00000057672 #23 THEM5 (ENSSSCG00000006614) #25 C2CD4D (ENSSSCG00000021540) #26 RORC (ENSSSCG00000026427) #27 LINGO4 (ENSSSCG00000026259) #28 TDRKH (ENSSSCG00000027770) #29 OAZ3 (ENSSSCG00000027091) #30 MRPL9 (ENSSSCG00000028343) #31 RIIAD1 (ENSSSCG00000041677) #33 CELF3 (ENSSSCG00000006618) #34 SNX27 (ENSSSCG00000006619) #35 TUFT1 (ENSSSCG00000006620) #36 ENSSSCG00000006621 #37 POGZ (ENSSSCG00000006622) PSMB4 (ENSSSCG00000034984) Artiodactyla_a ANCESTRAL SPECIES ENSGT00730000111580 #10 ENSGT00940000165404 ENSGT00940000163905 ENSGT00940000163498 ENSGT00940000161842.a ENSGT00940000162465 #12 ENSGT00940000154467.b.b.b #13 ENSGT00940000154467.b.b.a #14 ENSGT00940000154467.a.h.a ##13 ENSGT00940000154467.b.a #15 ENSGT00940000154467.a.h.b ##13 ENSGT00940000154467.a.i #16 ENSGT00940000163983 #17 ENSGT00940000162966 #18 ENSGT00940000154172 #21 ENSGT00940000154197.b.b #22 ENSGT00940000160047 #23 ENSGT00940000161937 #25 ENSGT00940000163537 #26 ENSGT00940000161521 #27 ENSGT00940000162157 #28 ENSGT00940000159364 #29 ENSGT00940000161581 #30 ENSGT00390000008281 #31 ENSGT00390000003062 #33 ENSGT00940000154716 #34 ENSGT00950000183212.C #35 ENSGT00950000183065.B #36 ENSGT00940000162698 #37 ENSGT00940000160649 ENSGT00390000000698 Artiodactyla_b ANCESTRAL SPECIES ENSGT00730000111580 #10 ENSGT00940000165404 ENSGT00940000163905 ENSGT00940000163498 ENSGT00940000161842.a ENSGT00940000162465 #12 ENSGT00940000154467.b.b.b #13 ENSGT00940000154467.b.b.a #14 ENSGT00940000154467.a.h.a ##13 ENSGT00940000154467.b.a #15 ENSGT00940000154467.a.h.b ##13 ENSGT00940000154467.a.i #16 ENSGT00940000163983 #17 ENSGT00940000162966 #18 ENSGT00940000154172 #21 ENSGT00940000154197.b.b #22 ENSGT00940000160047 #23 ENSGT00940000161937 #25 ENSGT00940000163537 #26 ENSGT00940000161521 #27 ENSGT00940000162157 #28 ENSGT00940000159364 #29 ENSGT00940000161581 #30 ENSGT00390000008281 #31 ENSGT00390000003062 #33 ENSGT00940000154716 #34 ENSGT00950000183212.C #35 ENSGT00950000183065.B #36 ENSGT00940000162698 #37 ENSGT00940000160649 ENSGT00390000000698 Pecora ANCESTRAL SPECIES 2 ENSGT00730000111580 #10 ENSGT00940000165404 ENSGT00940000163905 ENSGT00940000163498 ENSGT00940000161842.a ENSGT00940000162465 #12 ENSGT00940000154467.b.b.b #13 ENSGT00940000154467.b.b.a #14 ENSGT00940000154467.a.h.a ##13 ENSGT00940000154467.b.a #15 ENSGT00940000154467.a.h.b ##13 ENSGT00940000154467.a.i #16 ENSGT00940000163983 #17 ENSGT00940000162966 #18 ENSGT00940000154172.z #21 ENSGT00940000154197.b.b #22 ENSGT00940000160047 #23 ENSGT00940000161937 #25 ENSGT00940000163537 #26 ENSGT00940000161521 #27 ENSGT00940000162157 #28 ENSGT00940000159364 #29 ENSGT00940000161581 #30 ENSGT00390000008281 #31 ENSGT00390000003062 #33 ENSGT00940000154716 #34 ENSGT00950000183212.C #35 ENSGT00950000183065.B #36 ENSGT00940000162698 #37 ENSGT00940000160649 ENSGT00390000000698 Yarkand deer MODERN SPECIES 12 ENSCHYG00000019176 ENSCHYG00000019223 KPRP (ENSCHYG00000019359) LCE3B (ENSCHYG00000019507) ENSCHYG00000019532 ENSCHYG00000019568 ENSCHYG00000005111 ENSCHYG00000005119 LCE5A (ENSCHYG00000005138) CRNN (ENSCHYG00000005156) #12 ENSCHYG00000005180 #13 ENSCHYG00000005225 #14 ENSCHYG00000005265 TCHHL1 (ENSCHYG00000005278) #18 ENSCHYG00000005300 #21 S100A10 (ENSCHYG00000005318) #22 THEM4 (ENSCHYG00000005358) #23 THEM5 (ENSCHYG00000005402) #25 C2CD4D (ENSCHYG00000005436) #26 RORC (ENSCHYG00000005468) #27 LINGO4 (ENSCHYG00000005555) #28 TDRKH (ENSCHYG00000005624) #29 OAZ3 (ENSCHYG00000005747) #30 MRPL9 (ENSCHYG00000005891) #31 RIIAD1 (ENSCHYG00000006033) #33 CELF3 (ENSCHYG00000006085) #34 SNX27 (ENSCHYG00000006199) #35 TUFT1 (ENSCHYG00000006362) #36 ENSCHYG00000006682 #37 POGZ (ENSCHYG00000006826) PSMB4 (ENSCHYG00000006978) Percora_a ANCESTRAL SPECIES 1 ENSGT00940000165404 ENSGT00940000163905 ENSGT00940000163498 ENSGT00940000162465 #12 ENSGT00940000154467.b.b.b #13 ENSGT00940000154467.a.h.b ##13 ENSGT00940000154467.a.h.a ##13 ENSGT00940000154467.b.a #15 ENSGT00940000154467.a.i.a.a #16 ENSGT00940000154467.b.b.a #14 ENSGT00940000154467.a.i.b #16 ENSGT00940000163983 #17 ENSGT00940000162966 #18 ENSGT00940000154172.z #21 ENSGT00940000154197.a.a ##22 ENSGT00940000154197.b.b #22 ENSGT00940000160047 #23 ENSGT00940000161937 #25 ENSGT00940000163537 #26 ENSGT00940000161521 #27 ENSGT00940000162157 #28 ENSGT00940000159364 #29 ENSGT00940000161581 #30 ENSGT00390000008281 #31 ENSGT00390000003062 #33 ENSGT00940000154716 #34 ENSGT00950000183212.C #35 ENSGT00950000182891.a.a.b.a.a.a.b.a.b ENSGT00950000183065.B #36 ENSGT00940000162698 #37 ENSGT00940000160649 Siberian musk deer MODERN SPECIES 1243 ENSMMSG00000020455 ENSMMSG00000020485 ENSMMSG00000020597 ENSMMSG00000020612 ENSMMSG00000020304 YEATS4 (ENSMMSG00000020324) FRS2 (ENSMMSG00000020358) CCT2 (ENSMMSG00000020398) LRRC10 (ENSMMSG00000020422) BEST3 (ENSMMSG00000020449) RAB3IP (ENSMMSG00000020870) MYRFL (ENSMMSG00000021224) ENSMMSG00000021405 #22 CNOT2 (ENSMMSG00000021430) KCNMB4 (ENSMMSG00000021522) ENSMMSG00000021535 PTPRB (ENSMMSG00000021623) PTPRR (ENSMMSG00000022063) ENSMMSG00000022228 Bovidae ANCESTRAL SPECIES 1 ENSGT00730000111554 ENSGT00730000111580 #10 ENSGT00940000165404 ENSGT00940000163905 ENSGT00940000162465 #12 ENSGT00940000154467.b.b.b #13 ENSGT00940000154467.b.b.a #14 ENSGT00940000154467.a.h.a.a ##13 ENSGT00940000154467.a.h.a.b ##13 ENSGT00940000154467.b.a #15 ENSGT00940000154467.a.h.b ##13 ENSGT00940000154467.a.i.b #16 ENSGT00940000163983 #17 ENSGT00940000162966 #18 ENSGT00940000154172.z #21 ENSGT00940000154197.b.b #22 ENSGT00940000160047 #23 ENSGT00940000161937 #25 ENSGT00940000163537 #26 ENSGT00940000161521 #27 ENSGT00940000162157 #28 ENSGT00940000159364 #29 ENSGT00950000186450 ENSGT00940000161581 #30 ENSGT00390000008281 #31 ENSGT00390000003062 #33 ENSGT00940000154716 #34 ENSGT00950000183212.C #35 ENSGT00950000182891.a.a.b.a.a.a.b.a.b ENSGT00950000183065.B #36 ENSGT00940000162698 #37 Caprinae ANCESTRAL SPECIES 2 ENSGT00780000122937 ENSGT00940000166289 ENSGT00950000183312 ENSGT00730000111580 #10 ENSGT00940000165404 ENSGT00940000163905 ENSGT00940000163498 ENSGT00940000162465 #12 ENSGT00940000154467.b.b.b #13 ENSGT00940000154467.a.h.b ##13 ENSGT00940000154467.b.b.a #14 ENSGT00940000154467.a.i.b #16 ENSGT00940000164620 ENSGT00940000162966 #18 ENSGT00940000154172.z #21 ENSGT00940000154197.b.b #22 ENSGT00940000160047 #23 ENSGT00940000161937 #25 ENSGT00940000163537 #26 ENSGT00940000161521 #27 ENSGT00940000162157 #28 ENSGT00940000159364 #29 ENSGT00950000186450 ENSGT00940000161581 #30 ENSGT00390000008281 #31 ENSGT00390000003062 #33 ENSGT00940000154716 #34 ENSGT00950000183212.C #35 ENSGT00950000183065.B #36 ENSGT00940000162698 #37 ENSGT00940000160649 Goat MODERN SPECIES 22 ENSCHIG00000013514 SPRR4 (ENSCHIG00000013052) ENSCHIG00000024891 ENSCHIG00000007657 ENSCHIG00000017937 KPRP (ENSCHIG00000023870) C1orf68 (ENSCHIG00000011620) #10 LCE3B (ENSCHIG00000012019) CRNN (ENSCHIG00000025673) #12 ENSCHIG00000020535 #13 ENSCHIG00000026233 ##13 ENSCHIG00000018492 #16 ENSCHIG00000005102 TCHHL1 (ENSCHIG00000010186) #18 S100A11 (ENSCHIG00000009234) #21 S100A10 (ENSCHIG00000017889) #22 ENSCHIG00000024791 ENSCHIG00000023394 THEM4 (ENSCHIG00000015398) #23 THEM5 (ENSCHIG00000021133) #25 C2CD4D (ENSCHIG00000010717) #26 RORC (ENSCHIG00000005408) #27 LINGO4 (ENSCHIG00000010031) #28 TDRKH (ENSCHIG00000025326) #29 ENSCHIG00000018414 OAZ3 (ENSCHIG00000024499) #30 MRPL9 (ENSCHIG00000011797) #31 RIIAD1 (ENSCHIG00000025840) #33 CELF3 (ENSCHIG00000025847) #34 ENSCHIG00000012675 SNX27 (ENSCHIG00000021069) #35 Rambouillet Sheep MODERN SPECIES LCE1A (ENSOARG00020000260) ENSOARG00020000228 C1orf68 (ENSOARG00020000210) #10 LCE3B (ENSOARG00020000187) ENSOARG00020000176 ENSOARG00020000162 ENSOARG00020000140 ##13 ENSOARG00020000109 ##13 ENSOARG00020000102 ##13 ENSOARG00020018940 #15 ENSOARG00020018927 #14 ENSOARG00020018856 #16 ENSOARG00020018824 TCHHL1 (ENSOARG00020018793) #18 S100A11 (ENSOARG00020018738) #21 S100A10 (ENSOARG00020018696) #22 THEM4 (ENSOARG00020018617) #23 THEM5 (ENSOARG00020018565) #25 C2CD4D (ENSOARG00020018535) #26 RORC (ENSOARG00020018249) #27 LINGO4 (ENSOARG00020018213) #28 TDRKH (ENSOARG00020018147) #29 OAZ3 (ENSOARG00020018023) #30 MRPL9 (ENSOARG00020017917) #31 RIIAD1 (ENSOARG00020017857) #33 CELF3 (ENSOARG00020017622) #34 SNX27 (ENSOARG00020016963) #35 TUFT1 (ENSOARG00020016156) #36 ENSOARG00020016001 #37 POGZ (ENSOARG00020015459) PSMB4 (ENSOARG00020015380) Bovinae ANCESTRAL SPECIES 1 ENSGT00950000183312 ENSGT00730000111554 ENSGT00730000111580 #10 ENSGT00940000165404 ENSGT00940000163905 ENSGT00940000162465 #12 ENSGT00940000154467.b.b.b #13 ENSGT00940000154467.b.b.a #14 ENSGT00940000154467.a.h.a.a ##13 ENSGT00940000154467.b.a #15 ENSGT00940000154467.a.h.b ##13 ENSGT00940000154467.a.i.b #16 ENSGT00940000163983 #17 ENSGT00940000162966 #18 ENSGT00940000154172.z #21 ENSGT00940000154197.b.b #22 ENSGT00940000160047 #23 ENSGT00940000161937 #25 ENSGT00940000163537 #26 ENSGT00940000161521 #27 ENSGT00940000162157 #28 ENSGT00940000159364 #29 ENSGT00950000186450 ENSGT00940000161581 #30 ENSGT00390000008281 #31 ENSGT00390000003062 #33 ENSGT00940000154716 #34 ENSGT00950000183212.C #35 ENSGT00950000182891.a.a.b.a.a.a.b.a.b ENSGT00950000183065.B #36 ENSGT00940000154489.B American bison MODERN SPECIES 3295 ENSBBBG00000003062 ENSBBBG00000009107 SPRR4 (ENSBBBG00000013960) ENSBBBG00000003052 ENSBBBG00000013950 KPRP (ENSBBBG00000013941) C1orf68 (ENSBBBG00000013938) #10 LCE3B (ENSBBBG00000003036) ENSBBBG00000013936 ENSBBBG00000013932 #12 ENSBBBG00000003027 #13 ENSBBBG00000002896 ##13 ENSBBBG00000013898 #17 TCHHL1 (ENSBBBG00000013893) #18 ENSBBBG00000013884 #21 S100A10 (ENSBBBG00000013878) #22 THEM4 (ENSBBBG00000002992) #23 THEM5 (ENSBBBG00000002989) #25 RORC (ENSBBBG00000013856) #27 LINGO4 (ENSBBBG00000002969) #28 TDRKH (ENSBBBG00000013832) #29 ENSBBBG00000013787 OAZ3 (ENSBBBG00000013776) #30 MRPL9 (ENSBBBG00000002933) #31 RIIAD1 (ENSBBBG00000013726) #33 CELF3 (ENSBBBG00000002911) #34 SNX27 (ENSBBBG00000013687) #35 ENSBBBG00000013643 TUFT1 (ENSBBBG00000013630) #36 ENSBBBG00000013560 CGN (ENSBBBG00000013551) Bos ANCESTRAL SPECIES ENSGT00730000111554 ENSGT00730000111580 #10 ENSGT00940000163498 ENSGT00970000197102 ENSGT01050000245143 ENSGT00940000162465 #12 ENSGT00940000154467.b.b.b #13 ENSGT00940000154467.b.b.a #14 ENSGT00940000154467.a.h.a.a ##13 ENSGT00940000154467.b.a #15 ENSGT00940000154467.a.h.b ##13 ENSGT00940000154467.a.i.b #16 ENSGT00940000163983 #17 ENSGT00940000162966 #18 ENSGT00940000154172.z #21 ENSGT00940000154197.b.b #22 ENSGT00940000160047 #23 ENSGT00940000161937 #25 ENSGT00940000163537 #26 ENSGT00940000161521 #27 ENSGT00940000162157 #28 ENSGT00940000159364 #29 ENSGT00950000186450 ENSGT00940000161581 #30 ENSGT00390000008281 #31 ENSGT00390000003062 #33 ENSGT00940000154716 #34 ENSGT00950000183212.C #35 ENSGT00950000182891.a.a.b.a.a.a.b.a.b ENSGT00950000183065.B #36 ENSGT00940000154489.B Bos_a ANCESTRAL SPECIES 47 ENSGT00730000111554 ENSGT00730000111580 #10 ENSGT00940000163498 ENSGT00970000197102 ENSGT01050000245143 ENSGT00940000162465 #12 ENSGT00940000154467.b.b.b #13 ENSGT00940000154467.b.b.a #14 ENSGT00940000154467.a.h.a.a ##13 ENSGT00940000154467.b.a #15 ENSGT00940000154467.a.h.b ##13 ENSGT00940000154467.a.i.b #16 ENSGT00940000163983 #17 ENSGT00940000162966 #18 ENSGT00940000154172.z #21 ENSGT00940000154197.b.b #22 ENSGT00940000160047 #23 ENSGT00940000161937 #25 ENSGT00940000161521 #27 ENSGT00940000162157 #28 ENSGT00940000159364 #29 ENSGT00950000186450 ENSGT00940000161581 #30 ENSGT00390000008281 #31 ENSGT00390000003062 #33 ENSGT00940000154716 #34 ENSGT00950000183212.C #35 ENSGT00950000183065.B #36 ENSGT00940000154489.B ENSGT00940000162698 #37 ENSGT00940000160649 Wild yak MODERN SPECIES 688 ENSBMUG00000024947 C1orf68 (ENSBMUG00000024927) #10 LCE3B (ENSBMUG00000024922) ENSBMUG00000024916 ENSBMUG00000024912 ENSBMUG00000024905 #12 ENSBMUG00000024887 #13 ENSBMUG00000024880 #14 ENSBMUG00000024877 ##13 ENSBMUG00000024872 #15 ENSBMUG00000024867 ##13 RPTN (ENSBMUG00000024866) #16 ENSBMUG00000024861 #17 TCHHL1 (ENSBMUG00000024857) #18 ENSBMUG00000024843 #21 S100A10 (ENSBMUG00000024837) #22 THEM4 (ENSBMUG00000024826) #23 THEM5 (ENSBMUG00000024818) #25 RORC (ENSBMUG00000024807) #27 LINGO4 (ENSBMUG00000024776) #28 TDRKH (ENSBMUG00000024766) #29 ENSBMUG00000024752 OAZ3 (ENSBMUG00000024748) #30 MRPL9 (ENSBMUG00000024735) #31 RIIAD1 (ENSBMUG00000024721) #33 CELF3 (ENSBMUG00000024707) #34 SNX27 (ENSBMUG00000024681) #35 TUFT1 (ENSBMUG00000024610) #36 CGN (ENSBMUG00000024577) POGZ (ENSBMUG00000024528) PSMB4 (ENSBMUG00000024466) Domestic yak MODERN SPECIES 22 KPRP (ENSBGRG00000003208) C1orf68 (ENSBGRG00000003205) #10 ENSBGRG00000003177 ENSBGRG00000003168 ENSBGRG00000003159 ENSBGRG00000003154 #12 ENSBGRG00000003149 #13 ENSBGRG00000003128 ##13 ENSBGRG00000003103 #15 ENSBGRG00000003087 ##13 ENSBGRG00000003077 #16 ENSBGRG00000003029 #17 ENSBGRG00000003014 #18 ENSBGRG00000002999 ENSBGRG00000002990 #21 S100A10 (ENSBGRG00000002962) #22 ENSBGRG00000002950 THEM4 (ENSBGRG00000002939) #23 THEM5 (ENSBGRG00000002906) #25 RORC (ENSBGRG00000002783) #27 TDRKH (ENSBGRG00000002702) #29 ENSBGRG00000002678 ENSBGRG00000002657 #30 ENSBGRG00000002612 #28 RIIAD1 (ENSBGRG00000002574) #33 CELF3 (ENSBGRG00000002490) #34 SNX27 (ENSBGRG00000002390) #35 ENSBGRG00000002366 ENSBGRG00000002354 TUFT1 (ENSBGRG00000002325) #36 ENSBGRG00000002259 #37 Bos_b ANCESTRAL SPECIES 1 ENSGT00730000111580 #10 ENSGT00940000165404 ENSGT00940000163905 ENSGT00970000197102 ENSGT01050000245143 ENSGT00940000162465 #12 ENSGT00940000154467.b.b.b #13 ENSGT00940000154467.a.h.a.b ##13 ENSGT00940000154467.b.a #15 ENSGT00940000154467.a.i.a.a #16 ENSGT00940000154467.a.h.b ##13 ENSGT00940000154467.a.i.b #16 ENSGT00940000163983 #17 ENSGT00940000162966 #18 ENSGT00940000154172.z #21 ENSGT00940000154197.b.b #22 ENSGT00940000160047 #23 ENSGT00940000161937 #25 ENSGT00940000163537 #26 ENSGT00940000161521 #27 ENSGT00940000162157 #28 ENSGT00940000159364 #29 ENSGT00950000186450 ENSGT00940000161581 #30 ENSGT00390000008281 #31 ENSGT00390000003062 #33 ENSGT00940000154716 #34 ENSGT00950000183212.C #35 ENSGT00950000182891.a.a.b.a.a.a.b.a.b ENSGT00950000183065.B #36 ENSGT00940000154539.b.u Cow MODERN SPECIES 22 ENSBTAG00000053743 ENSBTAG00000054620 C3H1orf68 (ENSBTAG00000046138) #10 ENSBTAG00000050431 CRCT1 (ENSBTAG00000008700) ENSBTAG00000032446 CRNN (ENSBTAG00000054069) #12 ENSBTAG00000054258 #13 ENSBTAG00000054333 ##13 ENSBTAG00000048997 #15 ENSBTAG00000039357 ##13 RPTN (ENSBTAG00000039260) #16 TCHH (ENSBTAG00000053103) TCHHL1 (ENSBTAG00000015854) #18 S100A11 (ENSBTAG00000015145) #21 S100A10 (ENSBTAG00000015147) #22 THEM4 (ENSBTAG00000004772) #23 ENSBTAG00000051270 THEM5 (ENSBTAG00000000690) #25 C2CD4D (ENSBTAG00000047528) #26 RORC (ENSBTAG00000017405) #27 LINGO4 (ENSBTAG00000040596) #28 TDRKH (ENSBTAG00000021594) #29 ENSBTAG00000050352 OAZ3 (ENSBTAG00000021591) #30 MRPL9 (ENSBTAG00000000797) #31 CELF3 (ENSBTAG00000019131) #34 SNX27 (ENSBTAG00000001942) #35 ENSBTAG00000054946 TUFT1 (ENSBTAG00000017566) #36 ENSBTAG00000024407 Hybrid Bos Indicus MODERN SPECIES 22 LCE1A (ENSBIXG00005007992) C1orf68 (ENSBIXG00005007957) #10 LCE3B (ENSBIXG00005000042) ENSBIXG00005007950 ENSBIXG00005007945 ENSBIXG00005007940 ENSBIXG00005007930 #12 ENSBIXG00005005284 #13 ENSBIXG00005029242 #13 ENSBIXG00005001535 #15 ENSBIXG00005001542 #16 ENSBIXG00005001545 #16 ENSBIXG00005001555 #17 TCHHL1 (ENSBIXG00005001560) #18 ENSBIXG00005005274 #21 S100A10 (ENSBIXG00005029229) #22 THEM4 (ENSBIXG00005005256) #23 ENSBIXG00005001633 THEM5 (ENSBIXG00005029208) #25 C2CD4D (ENSBIXG00005001695) #26 RORC (ENSBIXG00005001718) #27 LINGO4 (ENSBIXG00005001805) #28 TDRKH (ENSBIXG00005029148) #29 ENSBIXG00005005150 OAZ3 (ENSBIXG00005001942) #30 MRPL9 (ENSBIXG00005005138) #31 RIIAD1 (ENSBIXG00005001997) #33 CELF3 (ENSBIXG00005005120) #34 SNX27 (ENSBIXG00005005088) #35 ENSBIXG00005005039 TUFT1 (ENSBIXG00005028855) #36 Cetacea ANCESTRAL SPECIES ENSGT00940000160475 ENSGT00940000161854 ENSGT00940000161706 ENSGT00390000000920 ENSGT00940000163114 ENSGT00940000161959 ENSGT00940000161276.C ENSGT00940000161986 ENSGT00940000161896 ENSGT00910000144329 ENSGT00940000162189 ENSGT00940000161606 ENSGT00940000162657 ENSGT00940000154467.a.h.a ##13 ENSGT00940000154172.ab.a.b.a.b #21 ENSGT00940000154197.b.b #22 ENSGT00940000160047 #23 ENSGT00940000161937 #25 ENSGT00940000163537 #26 ENSGT00940000161521 #27 ENSGT00940000162157 #28 ENSGT00940000159364 #29 ENSGT00940000161581 #30 ENSGT00390000008281 #31 ENSGT00390000003062 #33 ENSGT00940000154716 #34 ENSGT00950000183212.C #35 ENSGT00950000183065.B #36 ENSGT00940000162698 #37 ENSGT00940000160649 ENSGT00390000000698 Odontoceti ANCESTRAL SPECIES ENSGT00940000161706 ENSGT00390000000920 ENSGT00940000163114 ENSGT00940000161959 ENSGT00940000161276.C ENSGT00940000161986 ENSGT00940000161896 ENSGT00910000144329 ENSGT00940000162189 ENSGT00940000161606 ENSGT00940000162657 ENSGT00940000163248 ENSGT00940000164168 ENSGT00940000154467.a.h.a ##13 ENSGT00940000154172.ab.a.b.a.b #21 ENSGT00940000154197.b.b #22 ENSGT00940000160047 #23 ENSGT00940000161937 #25 ENSGT00940000163537 #26 ENSGT00940000161521 #27 ENSGT00940000162157 #28 ENSGT00940000159364 #29 ENSGT00940000161581 #30 ENSGT00390000008281 #31 ENSGT00390000003062 #33 ENSGT00940000154716 #34 ENSGT00950000183212.C #35 ENSGT00950000183065.B #36 ENSGT00940000162698 #37 ENSGT00940000160649 ENSGT00390000000698 Sperm whale MODERN SPECIES 15 NUP210L (ENSPCTG00005015439) NPR1 (ENSPCTG00005015896) INTS3 (ENSPCTG00005016167) SLC27A3 (ENSPCTG00005016261) GATAD2B (ENSPCTG00005016424) ENSPCTG00005016521 S100A8 (ENSPCTG00005016557) S100A12 (ENSPCTG00005016598) S100A9 (ENSPCTG00005016642) ENSPCTG00005016678 ENSPCTG00005016724 ENSPCTG00005016816 ENSPCTG00005016869 IVL (ENSPCTG00005017017) S100A11 (ENSPCTG00005017173) #21 S100A10 (ENSPCTG00005017205) #22 THEM4 (ENSPCTG00005017250) #23 TUFT1 (ENSPCTG00005017363) #36 SNX27 (ENSPCTG00005017684) #35 CELF3 (ENSPCTG00005017933) #34 RIIAD1 (ENSPCTG00005018184) #33 MRPL9 (ENSPCTG00005018221) #31 OAZ3 (ENSPCTG00005018289) #30 TDRKH (ENSPCTG00005018417) #29 POGZ (ENSPCTG00005018518) PSMB4 (ENSPCTG00005018741) ENSPCTG00005018784 SELENBP1 (ENSPCTG00005018804) RFX5 (ENSPCTG00005019016) PI4KB (ENSPCTG00005019046) PSMD4 (ENSPCTG00005019075) Odontoceti_a ANCESTRAL SPECIES ENSGT00940000160475 ENSGT00940000161854 ENSGT00940000161706 ENSGT00390000000920 ENSGT00940000163114 ENSGT00940000161959 ENSGT00940000161276.C ENSGT00940000161986 ENSGT00940000161896 ENSGT00910000144329 ENSGT00940000162189 ENSGT00940000161606 ENSGT00940000162657 ENSGT00940000154467.a.h.a ##13 ENSGT00940000154172.ab.a.b.a.b #21 ENSGT00940000154197.b.b #22 ENSGT00940000160047 #23 ENSGT00940000161937 #25 ENSGT00940000163537 #26 ENSGT00940000161521 #27 ENSGT00940000162157 #28 ENSGT00940000159364 #29 ENSGT00940000161581 #30 ENSGT00390000008281 #31 ENSGT00390000003062 #33 ENSGT00940000154716 #34 ENSGT00950000183212.C #35 ENSGT00950000183065.B #36 ENSGT00940000162698 #37 ENSGT00940000160649 ENSGT00390000000698 Dolphin MODERN SPECIES 4431 S100A10 (ENSTTRG00000008647) #22 Odontoceti_b ANCESTRAL SPECIES ENSGT00940000161854 ENSGT00940000161706 ENSGT00390000000920 ENSGT00940000163114 ENSGT00940000161959 ENSGT00940000161276.C ENSGT00940000161986 ENSGT00940000161896 ENSGT00910000144329 ENSGT00940000162189 ENSGT00940000161606 ENSGT00940000162657 ENSGT00390000009110.`b.a ENSGT00940000154467.a.h.a ##13 ENSGT00940000154172.ab.a.b.a.b #21 ENSGT00940000154197.b.b #22 ENSGT00940000160047 #23 ENSGT00940000161937 #25 ENSGT00940000163537 #26 ENSGT00940000161521 #27 ENSGT00940000162157 #28 ENSGT00940000159364 #29 ENSGT00940000161581 #30 ENSGT00390000008281 #31 ENSGT00390000003062 #33 ENSGT00940000154716 #34 ENSGT00950000183212.C #35 ENSGT00950000183065.B #36 ENSGT00940000162698 #37 ENSGT00940000160649 ENSGT00390000000698 Vaquita MODERN SPECIES S100A16 (ENSPSNG00000001392) ENSPSNG00000001377 S100A4 (ENSPSNG00000001347) S100A5 (ENSPSNG00000001323) S100A6 (ENSPSNG00000001310) S100A8 (ENSPSNG00000001301) S100A12 (ENSPSNG00000001285) S100A9 (ENSPSNG00000001270) ENSPSNG00000001247 ENSPSNG00000001227 ENSPSNG00000001169 ENSPSNG00000001131 ENSPSNG00000001116 ENSPSNG00000001017 #14 ENSPSNG00000000955 #21 ENSPSNG00000000934 #22 THEM4 (ENSPSNG00000000910) #23 THEM5 (ENSPSNG00000000888) #25 C2CD4D (ENSPSNG00000000879) #26 RORC (ENSPSNG00000000836) #27 LINGO4 (ENSPSNG00000000787) #28 TDRKH (ENSPSNG00000000758) #29 OAZ3 (ENSPSNG00000000680) #30 MRPL9 (ENSPSNG00000000615) #31 RIIAD1 (ENSPSNG00000000589) #33 CELF3 (ENSPSNG00000000542) #34 ENSPSNG00000000510 SNX27 (ENSPSNG00000000477) #35 TUFT1 (ENSPSNG00000000346) #36 ENSPSNG00000000227 #37 POGZ (ENSPSNG00000000153) Monodontidae ANCESTRAL SPECIES ENSGT00940000161854 ENSGT00940000161706 ENSGT00390000000920 ENSGT00940000163114 ENSGT00940000161959 ENSGT00940000161276.C ENSGT00940000161986 ENSGT00940000161896 ENSGT00910000144329 ENSGT00940000162189 ENSGT00940000161606 ENSGT00390000009110.`b.a ENSGT00780000122937 ENSGT00940000154467.a.h.a ##13 ENSGT00940000154172.ab.a.b.a.b #21 ENSGT00940000154197.b.b #22 ENSGT00940000160047 #23 ENSGT00940000161937 #25 ENSGT00940000163537 #26 ENSGT00940000161521 #27 ENSGT00940000162157 #28 ENSGT00940000159364 #29 ENSGT00940000161581 #30 ENSGT00390000008281 #31 ENSGT00390000003062 #33 ENSGT00940000154716 #34 ENSGT00950000183212.C #35 ENSGT00950000183065.B #36 ENSGT00940000162698 #37 ENSGT00940000160649 ENSGT00390000000698 Beluga whale MODERN SPECIES 99 LCE7A (ENSDLEG00000010318) ENSDLEG00000010357 ##13 ENSDLEG00000010490 #21 S100A10 (ENSDLEG00000010501) #22 THEM4 (ENSDLEG00000010507) #23 THEM5 (ENSDLEG00000010525) #25 C2CD4D (ENSDLEG00000010546) #26 RORC (ENSDLEG00000010552) #27 LINGO4 (ENSDLEG00000010572) #28 TDRKH (ENSDLEG00000010583) #29 OAZ3 (ENSDLEG00000010629) #30 MRPL9 (ENSDLEG00000010649) #31 RIIAD1 (ENSDLEG00000010670) #33 CELF3 (ENSDLEG00000010719) #34 SNX27 (ENSDLEG00000011126) #35 TUFT1 (ENSDLEG00000011162) #36 ENSDLEG00000011272 #37 POGZ (ENSDLEG00000011330) PSMB4 (ENSDLEG00000011388) Narwhal MODERN SPECIES 304 ENSMMNG00015001867 S100A3 (ENSMMNG00015001881) S100A4 (ENSMMNG00015001896) S100A5 (ENSMMNG00015001912) S100A6 (ENSMMNG00015001928) S100A8 (ENSMMNG00015001948) S100A12 (ENSMMNG00015001965) S100A9 (ENSMMNG00015001982) ENSMMNG00015001997 PRR9 (ENSMMNG00015002010) ENSMMNG00015002057 ENSMMNG00015002081 LCE7A (ENSMMNG00015002124) ENSMMNG00015002275 ##13 ENSMMNG00015002355 #21 S100A10 (ENSMMNG00015002372) #22 THEM4 (ENSMMNG00015002395) #23 THEM5 (ENSMMNG00015002421) #25 C2CD4D (ENSMMNG00015002439) #26 RORC (ENSMMNG00015002466) #27 LINGO4 (ENSMMNG00015002524) #28 TDRKH (ENSMMNG00015002542) #29 OAZ3 (ENSMMNG00015002678) #30 MRPL9 (ENSMMNG00015002723) #31 RIIAD1 (ENSMMNG00015002736) #33 CELF3 (ENSMMNG00015002770) #34 SNX27 (ENSMMNG00015002820) #35 ENSMMNG00015002872 TUFT1 (ENSMMNG00015002908) #36 ENSMMNG00015003029 #37 POGZ (ENSMMNG00015003154) Camelidae ANCESTRAL SPECIES 6 ENSGT00910000144329 ENSGT00940000162189 ENSGT00940000161606 ENSGT00940000162657 ENSGT00700000104637 ENSGT00730000111592 ENSGT00730000111626 ENSGT00940000164168 ENSGT00940000162465 #12 ENSGT00940000154467.b.b.b #13 ENSGT00940000154467.b.a #15 ENSGT00940000154467.a.h.b ##13 ENSGT00940000163983 #17 ENSGT00940000162966 #18 ENSGT00940000154172.x.a #21 ENSGT00940000154197.b.b #22 ENSGT00940000160047 #23 ENSGT00940000161937 #25 ENSGT00940000161521 #27 ENSGT00940000162157 #28 ENSGT00940000159364 #29 ENSGT00940000161581 #30 ENSGT00390000008281 #31 ENSGT00390000003062 #33 ENSGT00940000154716 #34 ENSGT00950000183212.C #35 ENSGT00950000183065.B #36 ENSGT00940000162698 #37 ENSGT00940000160649 ENSGT00390000000698 ENSGT00390000014244 Arabian camel MODERN SPECIES 13 ENSCDRG00005016128 ENSCDRG00005016116 ENSCDRG00005016105 C1orf68 (ENSCDRG00005016061) #10 ENSCDRG00005016046 CRNN (ENSCDRG00005015862) #12 ENSCDRG00005015826 #13 ENSCDRG00005015797 #13 ENSCDRG00005015707 #15 ENSCDRG00005015682 ENSCDRG00005015608 ##13 ENSCDRG00005015568 #17 ENSCDRG00005015525 #18 ENSCDRG00005015487 #21 ENSCDRG00005015452 ENSCDRG00005015426 #22 THEM4 (ENSCDRG00005015376) #23 THEM5 (ENSCDRG00005015330) #25 RORC (ENSCDRG00005015191) #27 LINGO4 (ENSCDRG00005015167) #28 TDRKH (ENSCDRG00005015083) #29 OAZ3 (ENSCDRG00005014745) #30 MRPL9 (ENSCDRG00005014548) #31 ENSCDRG00005014479 #33 CELF3 (ENSCDRG00005014367) #34 SNX27 (ENSCDRG00005014065) #35 TUFT1 (ENSCDRG00005013754) #36 ENSCDRG00005013658 #37 POGZ (ENSCDRG00005011049) PSMB4 (ENSCDRG00005010934) SELENBP1 (ENSCDRG00005010725) Alpaca MODERN SPECIES 4320 S100A10 (ENSVPAG00000003443) #22 Eulipotyphla ANCESTRAL SPECIES ENSGT00940000154197.b.b #22 Common shrew MODERN SPECIES 11722 S100A10 (ENSSARG00000000343) #22 Hedgehog MODERN SPECIES 9162 S100A10 (ENSEEUG00000012443) #22 Euarchontoglires ANCESTRAL SPECIES ENSGT00950000183301 ENSGT00730000111554 ENSGT00730000111580 #10 ENSGT00940000163905 ENSGT00940000163498 ENSGT00730000113097 #11 ENSGT00940000161842.a ENSGT00940000162465 #12 ENSGT00940000154467.b.b.b #13 ENSGT00940000154467.b.b.a #14 ENSGT00940000154467.b.a #15 ENSGT00940000154467.a #16 ENSGT00940000163983 #17 ENSGT00940000162966 #18 ENSGT00940000154172 #21 ENSGT00940000154197.b.b #22 ENSGT00940000160047 #23 ENSGT00940000161937 #25 ENSGT00940000163537 #26 ENSGT00940000161521 #27 ENSGT00940000162157 #28 ENSGT00940000159364 #29 ENSGT00940000161581 #30 ENSGT00390000008281 #31 ENSGT00390000003062 #33 ENSGT00940000154716 #34 ENSGT00950000183212.C #35 ENSGT00950000183065.B #36 ENSGT00940000162698 #37 ENSGT00940000160649 ENSGT00390000000698 Primates ANCESTRAL SPECIES 7 ENSGT00940000161842.b ENSGT00730000111580 #10 ENSGT00940000163498 ENSGT00940000165404 ENSGT00940000163905 ENSGT00730000113097 #11 ENSGT00940000161842.a ENSGT00940000162465 #12 ENSGT00940000154467.b.b.b #13 ENSGT00940000154467.b.b.a #14 ENSGT00940000154467.b.a #15 ENSGT00940000154467.a #16 ENSGT00940000163983 #17 ENSGT00940000162966 #18 ENSGT00940000154172 #21 ENSGT00940000154197.b.b #22 ENSGT00940000160047 #23 ENSGT00940000161937 #25 ENSGT00940000163537 #26 ENSGT00940000161521 #27 ENSGT00940000162157 #28 ENSGT00940000159364 #29 ENSGT00940000161581 #30 ENSGT00390000008281 #31 ENSGT00390000003062 #33 ENSGT00940000154716 #34 ENSGT00950000183212.C #35 ENSGT00950000183065.B #36 ENSGT00940000162698 #37 ENSGT00940000160649 ENSGT00390000000698 Strepsirrhini ANCESTRAL SPECIES ENSGT00940000154197.b.b #22 Bushbaby DUPLICATION Bushbaby MODERN SPECIES 354 ENSOGAG00000027255 #22 PBDC1 (ENSOGAG00000015205) ENSOGAG00000030758 ZDHHC15 (ENSOGAG00000016919) UPRT (ENSOGAG00000016773) ABCB7 (ENSOGAG00000032555) NEXMIF (ENSOGAG00000004432) ENSOGAG00000033284 RLIM (ENSOGAG00000004431) SLC16A2 (ENSOGAG00000004429) ENSOGAG00000032021 Bushbaby MODERN SPECIES 117 VILL (ENSOGAG00000008057) CTDSPL (ENSOGAG00000004624) ENSOGAG00000034113 ITGA9 (ENSOGAG00000004436) GOLGA4 (ENSOGAG00000027706) ENSOGAG00000029650 LRRFIP2 (ENSOGAG00000008423) MLH1 (ENSOGAG00000008416) EPM2AIP1 (ENSOGAG00000032395) TRANK1 (ENSOGAG00000026991) DCLK3 (ENSOGAG00000028781) STAC (ENSOGAG00000007133) ARPP21 (ENSOGAG00000009701) PDCD6IP (ENSOGAG00000006048) CLASP2 (ENSOGAG00000006037) ENSOGAG00000006046 #22 UBP1 (ENSOGAG00000000962) FBXL2 (ENSOGAG00000000961) SUSD5 (ENSOGAG00000008438) CRTAP (ENSOGAG00000024678) TMPPE (ENSOGAG00000008436) GLB1 (ENSOGAG00000008431) CCR4 (ENSOGAG00000008430) TRIM71 (ENSOGAG00000015458) CNOT10 (ENSOGAG00000007295) DYNC1LI1 (ENSOGAG00000016162) ENSOGAG00000026982 ENSOGAG00000028641 CMTM7 (ENSOGAG00000005726) CMTM8 (ENSOGAG00000013250) ENSOGAG00000025400 Haplorrhini ANCESTRAL SPECIES 7 ENSGT01090000263307 ENSGT00940000161842.b ENSGT00940000163498 ENSGT00940000165404 ENSGT00940000163905 ENSGT00730000113097 #11 ENSGT00940000161842.a ENSGT00940000162465 #12 ENSGT00940000154467.b.b.b #13 ENSGT00940000154467.b.b.a #14 ENSGT00940000154467.b.a #15 ENSGT00940000154467.a #16 ENSGT00940000163983 #17 ENSGT00940000162966 #18 ENSGT00940000154172 #21 ENSGT00940000154197.b.b #22 ENSGT00940000160047 #23 ENSGT00940000161937 #25 ENSGT00940000163537 #26 ENSGT00940000161521 #27 ENSGT00940000162157 #28 ENSGT00940000159364 #29 ENSGT00940000161581 #30 ENSGT00390000008281 #31 ENSGT00390000003062 #33 ENSGT00940000154716 #34 ENSGT00950000183212.C #35 ENSGT00950000183065.B #36 ENSGT00940000162698 #37 ENSGT00940000160649 ENSGT00390000000698 Tarsier MODERN SPECIES 5033 ENSTSYG00000037318 ENSTSYG00000025570 #21 S100A10 (ENSTSYG00000030364) #22 THEM4 (ENSTSYG00000005739) #23 THEM5 (ENSTSYG00000004917) #25 RORC (ENSTSYG00000010455) #27 LINGO4 (ENSTSYG00000036443) #28 TDRKH (ENSTSYG00000010405) #29 OAZ3 (ENSTSYG00000006300) #30 MRPL9 (ENSTSYG00000006296) #31 RIIAD1 (ENSTSYG00000025851) #33 Simiiformes ANCESTRAL SPECIES 8 ENSGT00940000161842.b ENSGT00940000163498.a ENSGT00940000165404 ENSGT00940000163498.b ENSGT00940000163905 ENSGT00730000113097 #11 ENSGT00940000161842.a ENSGT00940000162465 #12 ENSGT00940000154467.b.b.b #13 ENSGT00940000154467.b.b.a #14 ENSGT00940000154467.b.a #15 ENSGT00940000154467.a #16 ENSGT00940000163983 #17 ENSGT00940000162966 #18 ENSGT00940000154172.gb.b.a #21 ENSGT00940000154197.b.b #22 ENSGT00940000160047 #23 ENSGT00940000161937 #25 ENSGT00940000163537 #26 ENSGT00940000161521 #27 ENSGT00940000162157 #28 ENSGT00940000159364 #29 ENSGT00940000161581 #30 ENSGT00390000008281 #31 ENSGT00390000003062 #33 ENSGT00940000154716 #34 ENSGT00950000183212.C #35 ENSGT00950000183065.B #36 ENSGT00940000162698 #37 ENSGT00940000160649 ENSGT00390000000698 Platyrrhini ANCESTRAL SPECIES 12 ENSGT00950000183312 ENSGT00950000183278 ENSGT00950000183301 ENSGT00730000111554 ENSGT00730000111580 #10 ENSGT00940000161842.b ENSGT00940000161842.a ENSGT00940000162465 #12 ENSGT00940000154467.b.b.b #13 ENSGT00940000154467.a #16 ENSGT00940000163983 #17 ENSGT00940000162966 #18 ENSGT00940000154172.gb.b.a.b #21 ENSGT00940000154172.gb.a #21 ENSGT00940000154197.a.a ##22 ENSGT00940000154197.b.b #22 ENSGT00940000160047 #23 ENSGT00940000161937 #25 ENSGT00940000161521 #27 ENSGT00940000162157 #28 ENSGT00940000159364 #29 ENSGT00940000161581 #30 ENSGT00390000008281 #31 ENSGT00390000003062 #33 ENSGT00940000154716 #34 ENSGT00950000183212.C #35 ENSGT00950000183065.B #36 ENSGT00940000154489.B ENSGT00940000160649 ENSGT00390000000698 ENSGT00390000014244 Cebidae ANCESTRAL SPECIES 12 ENSGT00940000164168 ENSGT00950000183312 ENSGT00950000183278 ENSGT00950000183301 ENSGT00730000111554 ENSGT00730000111580 #10 ENSGT00940000161842.b ENSGT00940000161842.a ENSGT00940000162465 #12 ENSGT00940000154467.b.b.b #13 ENSGT00940000163983 #17 ENSGT00940000162966 #18 ENSGT00940000154172.gb.b.a.b #21 ENSGT00940000154172.gb.a #21 ENSGT00940000154197.a.a ##22 ENSGT00940000154197.b.b #22 ENSGT00940000160047 #23 ENSGT00940000161937 #25 ENSGT00940000161521 #27 ENSGT00940000162157 #28 ENSGT00940000159364 #29 ENSGT00940000161581 #30 ENSGT00390000008281 #31 ENSGT00390000003062 #33 ENSGT00940000154716 #34 ENSGT00950000183212.C #35 ENSGT00950000183065.B #36 ENSGT00940000154489.B ENSGT00940000160649 ENSGT00390000000698 ENSGT00390000014244 Marmoset MODERN SPECIES 9 TCHHL1 (ENSCJAG00000006396) #18 ENSCJAG00000055685 CRCT1 (ENSCJAG00000048030) #11 ENSCJAG00000038526 #10 ENSCJAG00000069309 ENSCJAG00000069815 ENSCJAG00000079985 ENSCJAG00000082018 ENSCJAG00000044588 ENSCJAG00000039629 ENSCJAG00000077758 ENSCJAG00000086813 ENSCJAG00000076233 ENSCJAG00000063584 #10 ENSCJAG00000021128 S100A10 (ENSCJAG00000047979) #22 THEM4 (ENSCJAG00000007646) #23 THEM5 (ENSCJAG00000042485) #25 RORC (ENSCJAG00000042586) #27 TDRKH (ENSCJAG00000007955) #29 OAZ3 (ENSCJAG00000007939) #30 MRPL9 (ENSCJAG00000007926) #31 RIIAD1 (ENSCJAG00000037171) #33 CELF3 (ENSCJAG00000007857) #34 SNX27 (ENSCJAG00000007791) #35 TUFT1 (ENSCJAG00000007748) #36 ENSCJAG00000007659 #37 ENSCJAG00000072484 POGZ (ENSCJAG00000007565) PSMB4 (ENSCJAG00000074292) SELENBP1 (ENSCJAG00000007509) Cebidae_a ANCESTRAL SPECIES ENSGT00940000154197.b.b #22 Capuchin MODERN SPECIES 6 SLC22A1 (ENSCCAG00000030320) IGF2R (ENSCCAG00000010739) MAS1 (ENSCCAG00000012059) PNLDC1 (ENSCCAG00000026232) MRPL18 (ENSCCAG00000027672) TCP1 (ENSCCAG00000028316) ACAT2 (ENSCCAG00000034076) WTAP (ENSCCAG00000021303) SOD2 (ENSCCAG00000025254) FNDC1 (ENSCCAG00000021952) TAGAP (ENSCCAG00000036010) RSPH3 (ENSCCAG00000035584) ENSCCAG00000029457 EZR (ENSCCAG00000029069) SYTL3 (ENSCCAG00000034836) ENSCCAG00000007021 #22 DYNLT1 (ENSCCAG00000035503) TMEM181 (ENSCCAG00000022105) ENSCCAG00000013481 TULP4 (ENSCCAG00000028211) ENSCCAG00000031330 GTF2H5 (ENSCCAG00000030667) SERAC1 (ENSCCAG00000029699) SYNJ2 (ENSCCAG00000025484) SNX9 (ENSCCAG00000019868) ZDHHC14 (ENSCCAG00000036394) TMEM242 (ENSCCAG00000032700) ENSCCAG00000025706 ARID1B (ENSCCAG00000027348) NOX3 (ENSCCAG00000030330) TFB1M (ENSCCAG00000015250) Bolivian squirrel monkey DUPLICATION Bolivian squirrel monkey MODERN SPECIES 156 ENSSBOG00000027899 TAFA4 (ENSSBOG00000027474) EOGT (ENSSBOG00000025714) ENSSBOG00000036317 #22 TMF1 (ENSSBOG00000024217) ENSSBOG00000028598 ARL6IP5 (ENSSBOG00000033916) LMOD3 (ENSSBOG00000031092) FRMD4B (ENSSBOG00000029694) MITF (ENSSBOG00000023784) MDFIC2 (ENSSBOG00000022036) FOXP1 (ENSSBOG00000027035) EIF4E3 (ENSSBOG00000020647) PROK2 (ENSSBOG00000029837) RYBP (ENSSBOG00000024112) SHQ1 (ENSSBOG00000021038) ENSSBOG00000030665 GXYLT2 (ENSSBOG00000021809) ENSSBOG00000030623 Bolivian squirrel monkey DUPLICATION Bolivian squirrel monkey MODERN SPECIES 45 PEX11A (ENSSBOG00000031420) WDR93 (ENSSBOG00000027681) MESP1 (ENSSBOG00000000188) MESP2 (ENSSBOG00000033873) ANPEP (ENSSBOG00000024297) ARPIN (ENSSBOG00000018686) ENSSBOG00000035698 ZNF710 (ENSSBOG00000031952) IDH2 (ENSSBOG00000021665) SEMA4B (ENSSBOG00000028869) CIB1 (ENSSBOG00000008160) TTLL13 (ENSSBOG00000030893) NGRN (ENSSBOG00000029844) VPS33B (ENSSBOG00000015264) RCCD1 (ENSSBOG00000030496) ENSSBOG00000011485 #22 UNC45A (ENSSBOG00000030766) HDDC3 (ENSSBOG00000035028) ENSSBOG00000017661 MAN2A2 (ENSSBOG00000024100) FES (ENSSBOG00000030210) FURIN (ENSSBOG00000025759) ENSSBOG00000019473 BLM (ENSSBOG00000030957) CRTC3 (ENSSBOG00000012255) IQGAP1 (ENSSBOG00000023549) ENSSBOG00000022409 SV2B (ENSSBOG00000023396) SLCO3A1 (ENSSBOG00000031641) ST8SIA2 (ENSSBOG00000023341) ENSSBOG00000000134 Bolivian squirrel monkey MODERN SPECIES 159 CAAP1 (ENSSBOG00000023545) PLAA (ENSSBOG00000032322) IFT74 (ENSSBOG00000026591) LRRC19 (ENSSBOG00000022112) TEK (ENSSBOG00000025527) ENSSBOG00000029262 ENSSBOG00000016954 #22 EQTN (ENSSBOG00000023038) MOB3B (ENSSBOG00000032815) ENSSBOG00000025861 C9orf72 (ENSSBOG00000020619) LINGO2 (ENSSBOG00000036332) ENSSBOG00000023911 ENSSBOG00000024405 ENSSBOG00000024689 ACO1 (ENSSBOG00000026008) RIGI (ENSSBOG00000030627) TOPORS (ENSSBOG00000003396) ENSSBOG00000020460 NDUFB6 (ENSSBOG00000021167) TMEM215 (ENSSBOG00000036309) APTX (ENSSBOG00000025215) Mas night monkey DUPLICATION Mas night monkey MODERN SPECIES 1144 KCNN2 (ENSANAG00000024841) ENSANAG00000024117 #22 ENSANAG00000021093 YTHDC2 (ENSANAG00000022177) MCC (ENSANAG00000025665) DCP2 (ENSANAG00000028729) ENSANAG00000020898 REEP5 (ENSANAG00000031617) SRP19 (ENSANAG00000032576) APC (ENSANAG00000021032) ENSANAG00000007660 ENSANAG00000031515 EPB41L4A (ENSANAG00000027415) Mas night monkey MODERN SPECIES 784 RPTN (ENSANAG00000038262) #16 ENSANAG00000032085 #17 TCHHL1 (ENSANAG00000031283) #18 ENSANAG00000030118 #21 ENSANAG00000037832 ENSANAG00000027772 LCE1A (ENSANAG00000028061) ENSANAG00000025630 SPRR3 (ENSANAG00000036666) ENSANAG00000020214 C1orf68 (ENSANAG00000030607) #10 ENSANAG00000029129 ENSANAG00000027666 #22 THEM4 (ENSANAG00000023948) #23 THEM5 (ENSANAG00000016558) #25 RORC (ENSANAG00000029747) #27 LINGO4 (ENSANAG00000006067) #28 TDRKH (ENSANAG00000021663) #29 OAZ3 (ENSANAG00000023949) #30 MRPL9 (ENSANAG00000022559) #31 RIIAD1 (ENSANAG00000019415) #33 CELF3 (ENSANAG00000030590) #34 SNX27 (ENSANAG00000034302) #35 TUFT1 (ENSANAG00000033115) #36 CGN (ENSANAG00000028207) POGZ (ENSANAG00000028936) PSMB4 (ENSANAG00000034196) SELENBP1 (ENSANAG00000035868) Mas night monkey MODERN SPECIES 984 ENSANAG00000020863 TRBV7-9 (ENSANAG00000038442) ENSANAG00000019721 TRBV16 (ENSANAG00000006214) ENSANAG00000006270 TRBV24-1 (ENSANAG00000005245) TRBV27 (ENSANAG00000005926) ENSANAG00000036006 ENSANAG00000020140 ENSANAG00000020186 EPHB6 (ENSANAG00000030703) TRPV6 (ENSANAG00000026042) TRPV5 (ENSANAG00000024458) LLCFC1 (ENSANAG00000019596) KEL (ENSANAG00000022139) ENSANAG00000014191 #22 OR9A2 (ENSANAG00000029981) PIP (ENSANAG00000020695) GSTK1 (ENSANAG00000038133) TMEM139 (ENSANAG00000017815) CASP2 (ENSANAG00000022973) CLCN1 (ENSANAG00000024604) FAM131B (ENSANAG00000014095) ENSANAG00000025526 EPHA1 (ENSANAG00000036617) ENSANAG00000019805 ENSANAG00000034570 TCAF1 (ENSANAG00000034724) ENSANAG00000036265 OR2A2 (ENSANAG00000034657) ARHGEF5 (ENSANAG00000022132) Mas night monkey MODERN SPECIES 1045 SPG21 (ENSANAG00000024557) ANKDD1A (ENSANAG00000024207) PLEKHO2 (ENSANAG00000032112) PIF1 (ENSANAG00000026396) RBPMS2 (ENSANAG00000014652) OAZ2 (ENSANAG00000032482) ZNF609 (ENSANAG00000036036) ENSANAG00000020189 #22 TRIP4 (ENSANAG00000027612) PCLAF (ENSANAG00000032895) ENSANAG00000020004 CSNK1G1 (ENSANAG00000034685) ENSANAG00000038250 PPIB (ENSANAG00000038282) SNX22 (ENSANAG00000031598) SNX1 (ENSANAG00000028586) CIAO2A (ENSANAG00000030216) DAPK2 (ENSANAG00000025796) HERC1 (ENSANAG00000034456) FBXL22 (ENSANAG00000018462) ENSANAG00000019672 USP3 (ENSANAG00000038125) CA12 (ENSANAG00000031578) Catarrhini ANCESTRAL SPECIES 10 ENSGT00940000161842.b.d ENSGT00940000163498.a ENSGT00940000165404 ENSGT00940000163498.b ENSGT00940000163905 ENSGT00730000113097 #11 ENSGT00940000161842.a ENSGT00940000162465 #12 ENSGT00940000154467.b.b.b #13 ENSGT00940000154467.b.b.a #14 ENSGT00940000154467.b.a #15 ENSGT00940000154467.a #16 ENSGT00940000163983 #17 ENSGT00940000162966 #18 ENSGT00940000154172.gb.b.a #21 ENSGT00940000154197.b.b #22 ENSGT00940000160047 #23 ENSGT00940000161937 #25 ENSGT00940000163537 #26 ENSGT00940000161521 #27 ENSGT00940000162157 #28 ENSGT00940000159364 #29 ENSGT00940000161581 #30 ENSGT00390000008281 #31 ENSGT00390000003062 #33 ENSGT00940000154716 #34 ENSGT00950000183212.C #35 ENSGT00950000183065.B #36 ENSGT00940000162698 #37 ENSGT00940000160649 ENSGT00390000000698 Hominoidea ANCESTRAL SPECIES 7 ENSGT00940000165404 ENSGT00940000163498.b ENSGT00940000163905 ENSGT00730000113097 #11 ENSGT00940000161842.a ENSGT00940000162465 #12 ENSGT00940000164915 ENSGT00940000154467.b.b.b #13 ENSGT00940000154467.b.b.a #14 ENSGT00940000154467.b.a #15 ENSGT00940000154467.a #16 ENSGT00940000164620 ENSGT00940000163983 #17 ENSGT00940000162966 #18 ENSGT00940000154172.gb.b.a #21 ENSGT00940000154197.b.b #22 ENSGT00940000160047.s #23 ENSGT00940000161937 #25 ENSGT00940000163537 #26 ENSGT00940000161521 #27 ENSGT00940000162157 #28 ENSGT00940000159364 #29 ENSGT00940000161581 #30 ENSGT00390000008281 #31 ENSGT00390000003062 #33 ENSGT00940000154716 #34 ENSGT00950000183212.C #35 ENSGT00950000183065.B #36 ENSGT00940000162698 #37 ENSGT00940000160649 ENSGT00390000000698 Gibbon MODERN SPECIES 158 S100A10 (ENSNLEG00000013123) #22 Hominidae ANCESTRAL SPECIES 6 ENSGT00940000165404 ENSGT00940000163498.b ENSGT00940000163905 ENSGT00730000113097 #11 ENSGT00940000161842.a ENSGT00940000162465 #12 ENSGT00940000164915 ENSGT00940000154467.b.b.b #13 ENSGT00940000154467.b.b.a #14 ENSGT00940000154467.b.a #15 ENSGT00940000154467.a #16 ENSGT00940000164620 ENSGT00940000163983.b #17 ENSGT00940000162966 #18 ENSGT00940000154172.gb.b.a #21 ENSGT00940000154197.b.b #22 ENSGT00940000160047.s #23 ENSGT00940000161937 #25 ENSGT00940000163537 #26 ENSGT00940000161521 #27 ENSGT00940000162157 #28 ENSGT00940000159364 #29 ENSGT00940000161581 #30 ENSGT00390000008281 #31 ENSGT00390000003062 #33 ENSGT00940000154716 #34 ENSGT00950000183212.C #35 ENSGT00950000183065.B #36 ENSGT00940000162698 #37 ENSGT00940000160649 ENSGT00390000000698 Orangutan MODERN SPECIES LCE2B (ENSPPYG00000038561) LCE3A (ENSPPYG00000000838) LCE3B (ENSPPYG00000039034) LCE3C (ENSPPYG00000000839) ENSPPYG00000034690 ENSPPYG00000037350 CRCT1 (ENSPPYG00000000842) #11 LCE5A (ENSPPYG00000000843) CRNN (ENSPPYG00000000844) #12 ENSPPYG00000000845 #13 ENSPPYG00000040029 #14 ENSPPYG00000000847 #15 ENSPPYG00000032510 #17 TCHHL1 (ENSPPYG00000034079) #18 ENSPPYG00000000848 #21 ENSPPYG00000000850 #22 THEM4 (ENSPPYG00000000851) #23 THEM5 (ENSPPYG00000000852) #25 C2CD4D (ENSPPYG00000029725) #26 RORC (ENSPPYG00000000853) #27 LINGO4 (ENSPPYG00000000854) #28 TDRKH (ENSPPYG00000000855) #29 OAZ3 (ENSPPYG00000000856) #30 MRPL9 (ENSPPYG00000000857) #31 ENSPPYG00000000858 #33 CELF3 (ENSPPYG00000000859) #34 SNX27 (ENSPPYG00000000860) #35 TUFT1 (ENSPPYG00000000861) #36 ENSPPYG00000000862 #37 POGZ (ENSPPYG00000000864) PSMB4 (ENSPPYG00000000865) Homo/Pan/Gorilla group ANCESTRAL SPECIES 6 ENSGT00940000163905 ENSGT00730000113097 #11 ENSGT00940000161842.a ENSGT00940000162465 #12 ENSGT00940000164915 ENSGT00940000154467.b.b.b #13 ENSGT00940000154467.b.b.a #14 ENSGT00940000154467.b.a #15 ENSGT00940000154467.a #16 ENSGT00390000014753.l.b ENSGT00910000147236.b ENSGT00940000164620 ENSGT00940000163983.b #17 ENSGT00940000162966 #18 ENSGT00940000154172.gb.b.a #21 ENSGT00940000154197.b.b #22 ENSGT00940000160047.s #23 ENSGT00940000161937 #25 ENSGT00940000163537 #26 ENSGT00940000161521 #27 ENSGT00940000162157 #28 ENSGT00940000159364 #29 ENSGT00940000161581 #30 ENSGT00390000008281 #31 ENSGT00390000003062 #33 ENSGT00940000154716 #34 ENSGT00950000183212.C #35 ENSGT00950000183065.B #36 ENSGT00940000162698 #37 ENSGT00940000160649 ENSGT00390000000698 Gorilla MODERN SPECIES LCE2C (ENSGGOG00000041860) LCE2D (ENSGGOG00000039821) LCE3B (ENSGGOG00000002199) ENSGGOG00000023986 LCE5A (ENSGGOG00000025178) CRNN (ENSGGOG00000023574) #12 ENSGGOG00000024846 ENSGGOG00000008451 #13 ENSGGOG00000001834 #15 ENSGGOG00000004511 #16 ENSGGOG00000036337 ENSGGOG00000043419 ENSGGOG00000027117 TCHHL1 (ENSGGOG00000012074) #18 S100A11 (ENSGGOG00000008680) #21 ENSGGOG00000025421 #22 THEM4 (ENSGGOG00000008114) #23 THEM5 (ENSGGOG00000002230) #25 C2CD4D (ENSGGOG00000028484) #26 RORC (ENSGGOG00000002223) #27 LINGO4 (ENSGGOG00000004487) #28 TDRKH (ENSGGOG00000025419) #29 OAZ3 (ENSGGOG00000001904) #30 MRPL9 (ENSGGOG00000001902) #31 ENSGGOG00000003583 #33 CELF3 (ENSGGOG00000021973) #34 ENSGGOG00000023049 #34 SNX27 (ENSGGOG00000034898) #35 ENSGGOG00000026173 TUFT1 (ENSGGOG00000007971) #36 ENSGGOG00000007953 #37 Homo/Pan group ANCESTRAL SPECIES 7 ENSGT00940000163498.b ENSGT00940000163905.q ENSGT00940000163905.r ENSGT00730000113097 #11 ENSGT00940000161842.a ENSGT00940000162465 #12 ENSGT00940000164915 ENSGT00940000154467.b.b.b #13 ENSGT00940000154467.b.b.a #14 ENSGT00940000154467.b.a #15 ENSGT00940000154467.a #16 ENSGT00940000164620 ENSGT00940000163983.b #17 ENSGT00940000162966 #18 ENSGT00940000154172.gb.b.a #21 ENSGT00940000154197.b.b #22 ENSGT00940000160047.s #23 ENSGT00940000161937 #25 ENSGT00940000163537 #26 ENSGT00940000161521 #27 ENSGT00940000162157 #28 ENSGT00940000159364 #29 ENSGT00940000161581 #30 ENSGT00390000008281 #31 ENSGT00390000003062 #33 ENSGT00940000154716 #34 ENSGT00950000183212.C #35 ENSGT00950000183065.B #36 ENSGT00940000162698 #37 ENSGT00940000160649 ENSGT00390000000698 Pan ANCESTRAL SPECIES ENSGT00940000163905.q ENSGT00940000163905.r ENSGT00730000113097 #11 ENSGT00940000161842.a ENSGT00940000162465 #12 ENSGT00940000164915 ENSGT00940000154467.b.b.b #13 ENSGT00940000154467.b.b.a #14 ENSGT00940000154467.b.a #15 ENSGT00940000154467.a #16 ENSGT00390000014753.l.b ENSGT00910000147236.b ENSGT00940000163983.b #17 ENSGT00940000162966 #18 ENSGT00940000154172.gb.b.a #21 ENSGT00940000154197.b.b #22 ENSGT00940000160047.s #23 ENSGT00940000161937 #25 ENSGT00940000163537 #26 ENSGT00940000161521 #27 ENSGT00940000162157 #28 ENSGT00940000159364 #29 ENSGT00940000161581 #30 ENSGT00390000008281 #31 ENSGT00390000003062 #33 ENSGT00940000154716 #34 ENSGT00950000183212.C #35 ENSGT00950000183065.B #36 ENSGT00940000162698 #37 ENSGT00940000160649 ENSGT00390000000698 Chimpanzee MODERN SPECIES LCE3D (ENSPTRG00000043930) LCE3E (ENSPTRG00000049653) CRCT1 (ENSPTRG00000001316) #11 LCE5A (ENSPTRG00000001315) CRNN (ENSPTRG00000001314) #12 ENSPTRG00000052403 FLG2 (ENSPTRG00000001313) #13 FLG (ENSPTRG00000001312) #14 HRNR (ENSPTRG00000044100) #15 RPTN (ENSPTRG00000033880) #16 ENSPTRG00000052139 ENSPTRG00000049010 #17 ENSPTRG00000046417 #17 TCHHL1 (ENSPTRG00000001305) #18 S100A11 (ENSPTRG00000001303) #21 S100A10 (ENSPTRG00000001302) #22 THEM4 (ENSPTRG00000001301) #23 THEM5 (ENSPTRG00000001300) #25 C2CD4D (ENSPTRG00000041010) #26 RORC (ENSPTRG00000032436) #27 LINGO4 (ENSPTRG00000001298) #28 TDRKH (ENSPTRG00000001297) #29 OAZ3 (ENSPTRG00000001296) #30 MRPL9 (ENSPTRG00000001295) #31 RIIAD1 (ENSPTRG00000001294) #33 CELF3 (ENSPTRG00000001293) #34 SNX27 (ENSPTRG00000001292) #35 TUFT1 (ENSPTRG00000001291) #36 CGN (ENSPTRG00000022663) #37 POGZ (ENSPTRG00000001289) PSMB4 (ENSPTRG00000001288) Bonobo MODERN SPECIES LCE3A (ENSPPAG00000014043) LCE3B (ENSPPAG00000023046) LCE3C (ENSPPAG00000013471) LCE3D (ENSPPAG00000019158) LCE3E (ENSPPAG00000024570) CRCT1 (ENSPPAG00000010532) #11 LCE5A (ENSPPAG00000036794) ENSPPAG00000014413 ENSPPAG00000041801 #16 ENSPPAG00000038158 ENSPPAG00000034752 ENSPPAG00000042806 #17 TCHHL1 (ENSPPAG00000042692) #18 ENSPPAG00000039848 S100A11 (ENSPPAG00000030540) #21 S100A10 (ENSPPAG00000037637) #22 THEM4 (ENSPPAG00000035727) #23 THEM5 (ENSPPAG00000030756) #25 RORC (ENSPPAG00000027120) #27 LINGO4 (ENSPPAG00000017350) #28 TDRKH (ENSPPAG00000028994) #29 OAZ3 (ENSPPAG00000013394) #30 MRPL9 (ENSPPAG00000016172) #31 ENSPPAG00000028387 #33 CELF3 (ENSPPAG00000038551) #34 SNX27 (ENSPPAG00000043259) #35 TUFT1 (ENSPPAG00000038447) #36 ENSPPAG00000041669 #37 POGZ (ENSPPAG00000029740) PSMB4 (ENSPPAG00000029520) SELENBP1 (ENSPPAG00000043100) Human MODERN SPECIES LCE3A (ENSG00000185962) LCE3B (ENSG00000187238) LCE3C (ENSG00000244057) LCE3D (ENSG00000163202) LCE3E (ENSG00000185966) CRCT1 (ENSG00000169509) #11 LCE5A (ENSG00000186207) CRNN (ENSG00000143536) #12 FLG2 (ENSG00000143520) #13 FLG (ENSG00000143631) #14 HRNR (ENSG00000197915) #15 RPTN (ENSG00000215853) #16 TCHH (ENSG00000159450) TCHHL1 (ENSG00000182898) #18 S100A11 (ENSG00000163191) #21 S100A10 (ENSG00000197747) #22 THEM4 (ENSG00000159445) #23 THEM5 (ENSG00000196407) #25 C2CD4D (ENSG00000225556) #26 RORC (ENSG00000143365) #27 LINGO4 (ENSG00000213171) #28 TDRKH (ENSG00000182134) #29 OAZ3 (ENSG00000143450) #30 MRPL9 (ENSG00000143436) #31 RIIAD1 (ENSG00000178796) #33 CELF3 (ENSG00000159409) #34 SNX27 (ENSG00000143376) #35 TUFT1 (ENSG00000143367) #36 CGN (ENSG00000143375) POGZ (ENSG00000143442) PSMB4 (ENSG00000159377) Cercopithecidae ANCESTRAL SPECIES 22 ENSGT00940000163498.a ENSGT00940000165404 ENSGT00940000163498.b ENSGT00940000163905 ENSGT00730000113097 #11 ENSGT00940000161842.a ENSGT00940000162465 #12 ENSGT00940000154467.b.b.b #13 ENSGT00940000154467.b.b.a #14 ENSGT00940000154467.b.a #15 ENSGT00940000154467.a #16 ENSGT00940000163983 #17 ENSGT00940000162966 #18 ENSGT00940000154172.gb.b.a.c #21 ENSGT00420000029746.e.a.b.a.a.a.a.b.b.b.a ENSGT00940000154197.b.b #22 ENSGT00940000160047 #23 ENSGT00940000161937 #25 ENSGT00940000163537 #26 ENSGT00940000161521 #27 ENSGT00940000162157 #28 ENSGT00940000159364 #29 ENSGT00940000161581 #30 ENSGT00390000008281 #31 ENSGT00390000003062 #33 ENSGT00940000154716 #34 ENSGT00950000183212.C #35 ENSGT00950000183065.B #36 ENSGT00940000162698 #37 ENSGT00940000160649 ENSGT00390000000698 Rhinopithecus ANCESTRAL SPECIES 23 ENSGT00940000154467.b.a #15 ENSGT00940000154467.a #16 ENSGT00940000163983 #17 ENSGT00940000162966 #18 ENSGT00940000154172.gb.b.a.c #21 ENSGT00420000029746.e.a.b.a.a.a.a.b.b.b.a ENSGT00940000154197.b.b #22 ENSGT00940000160047 #23 ENSGT00940000161937 #25 ENSGT00940000161521 #27 ENSGT00940000162157 #28 ENSGT00940000159364 #29 ENSGT00940000161581 #30 ENSGT00390000008281 #31 ENSGT00390000003062 #33 ENSGT00940000154716 #34 ENSGT00950000183212.C #35 ENSGT00950000183065.B #36 ENSGT00940000162698 #37 ENSGT00940000160649 ENSGT00390000000698 ENSGT00390000014244 Black snub-nosed monkey DUPLICATION Black snub-nosed monkey MODERN SPECIES 590 RPTN (ENSRBIG00000030933) #16 ENSRBIG00000033037 TCHHL1 (ENSRBIG00000043220) #18 ENSRBIG00000041931 #21 ENSRBIG00000034058 ENSRBIG00000036151 #22 THEM4 (ENSRBIG00000031977) #23 THEM5 (ENSRBIG00000028002) #25 RORC (ENSRBIG00000031354) #27 LINGO4 (ENSRBIG00000026745) #28 TDRKH (ENSRBIG00000044860) #29 OAZ3 (ENSRBIG00000032011) #30 MRPL9 (ENSRBIG00000036937) #31 RIIAD1 (ENSRBIG00000036425) #33 CELF3 (ENSRBIG00000043205) #34 SNX27 (ENSRBIG00000043969) #35 TUFT1 (ENSRBIG00000022910) #36 ENSRBIG00000017870 #37 POGZ (ENSRBIG00000044811) PSMB4 (ENSRBIG00000041329) SELENBP1 (ENSRBIG00000025453) Black snub-nosed monkey MODERN SPECIES 1727 USP38 (ENSRBIG00000034798) GAB1 (ENSRBIG00000039258) SMARCA5 (ENSRBIG00000044644) FREM3 (ENSRBIG00000043128) ENSRBIG00000035543 ENSRBIG00000013183 ENSRBIG00000036198 ENSRBIG00000013900 #22 Golden snub-nosed monkey DUPLICATION Golden snub-nosed monkey MODERN SPECIES 2622 ENSRROG00000036104 #21 ENSRROG00000031960 ENSRROG00000041423 #22 THEM4 (ENSRROG00000028759) #23 THEM5 (ENSRROG00000042268) #25 RORC (ENSRROG00000040819) #27 LINGO4 (ENSRROG00000011588) #28 TDRKH (ENSRROG00000036923) #29 OAZ3 (ENSRROG00000038133) #30 MRPL9 (ENSRROG00000031111) #31 RIIAD1 (ENSRROG00000045557) #33 CELF3 (ENSRROG00000044979) #34 SNX27 (ENSRROG00000032485) #35 TUFT1 (ENSRROG00000040599) #36 ENSRROG00000028411 #37 POGZ (ENSRROG00000032667) PSMB4 (ENSRROG00000029859) SELENBP1 (ENSRROG00000037330) Golden snub-nosed monkey MODERN SPECIES 2324 CXorf58 (ENSRROG00000029252) ENSRROG00000025906 #22 APOO (ENSRROG00000028881) ENSRROG00000034497 SAT1 (ENSRROG00000042719) Cercopithecinae ANCESTRAL SPECIES ENSGT00940000165404 ENSGT00940000163498.b ENSGT00940000163905.u ENSGT00940000163905.v ENSGT00730000113097 #11 ENSGT00940000161842.a ENSGT00940000162465 #12 ENSGT00940000154467.b.b.b #13 ENSGT00940000154467.b.b.a #14 ENSGT00940000154467.b.a #15 ENSGT00940000154467.a #16 ENSGT00940000163983 #17 ENSGT00940000162966 #18 ENSGT00940000154172.gb.b.a.c.d #21 ENSGT00420000029746.e.a.b.a.a.a.a.b.b.b.a ENSGT00940000154197.b.b #22 ENSGT00940000160047 #23 ENSGT00940000161937 #25 ENSGT00940000163537 #26 ENSGT00940000161521 #27 ENSGT00940000162157 #28 ENSGT00940000159364 #29 ENSGT00940000161581 #30 ENSGT00390000008281 #31 ENSGT00390000003062 #33 ENSGT00940000154716 #34 ENSGT00950000183212.C #35 ENSGT00950000183065.B #36 ENSGT00940000162698 #37 ENSGT00940000160649 ENSGT00390000000698 Vervet Monkey MODERN SPECIES 12 SMCP (ENSCSAG00000000039) LCE6A (ENSCSAG00000000038) ENSCSAG00000018408 ENSCSAG00000001840 KPRP (ENSCSAG00000018409) C1orf68 (ENSCSAG00000001839) #10 ENSCSAG00000018410 LCE2A (ENSCSAG00000018411) LCE5A (ENSCSAG00000001838) ENSCSAG00000018412 CRNN (ENSCSAG00000001837) #12 ENSCSAG00000001834 #13 RPTN (ENSCSAG00000001833) #16 ENSCSAG00000001832 #17 ENSCSAG00000001831 ENSCSAG00000001830 #22 THEM4 (ENSCSAG00000001829) #23 C2CD4D (ENSCSAG00000018413) #26 RORC (ENSCSAG00000001825) #27 LINGO4 (ENSCSAG00000000180) #28 TDRKH (ENSCSAG00000001820) #29 ENSCSAG00000001818 MRPL9 (ENSCSAG00000001816) #31 RIIAD1 (ENSCSAG00000001814) #33 ENSCSAG00000000179 CELF3 (ENSCSAG00000001812) #34 SNX27 (ENSCSAG00000001810) #35 TUFT1 (ENSCSAG00000001806) #36 ENSCSAG00000001804 #37 POGZ (ENSCSAG00000001803) PSMB4 (ENSCSAG00000001802) Cercopithecinae_a ANCESTRAL SPECIES ENSGT00940000161842.b.d.c ENSGT00940000161842.b.d.d ENSGT00730000113097 #11 ENSGT00940000161842.a ENSGT00940000162465 #12 ENSGT00940000154467.b.b.b #13 ENSGT00940000154467.b.b.a #14 ENSGT00940000154467.b.a #15 ENSGT00940000154467.a #16 ENSGT00940000163983 #17 ENSGT00390000014753.l.b ENSGT00940000164620 ENSGT00940000162966 #18 ENSGT00940000154172.gb.b.a.c.d #21 ENSGT00420000029746.e.a.b.a.a.a.a.b.b.b.a ENSGT00940000154197.b.b #22 ENSGT00940000160047 #23 ENSGT00940000161937 #25 ENSGT00940000163537 #26 ENSGT00940000161521 #27 ENSGT00940000162157 #28 ENSGT00940000159364 #29 ENSGT00940000161581 #30 ENSGT00390000008281 #31 ENSGT00390000003062 #33 ENSGT00940000154716 #34 ENSGT00950000183212.C #35 ENSGT00950000183065.B #36 ENSGT00940000162698 #37 ENSGT00940000160649 ENSGT00390000000698 Cercopithecinae_b ANCESTRAL SPECIES 3 ENSGT00940000161842.b.c ENSGT00940000161842.b.d.c ENSGT00940000161842.b.d.d ENSGT00940000163905.v ENSGT00730000113097 #11 ENSGT00940000161842.a ENSGT00940000162465 #12 ENSGT00940000154467.b.b.b #13 ENSGT00940000154467.a #16 ENSGT00940000163983 #17 ENSGT00390000014753.l.b ENSGT00940000164620 ENSGT00940000162966 #18 ENSGT00940000154172.gb.b.a.c.d #21 ENSGT00420000029746.e.a.b.a.a.a.a.b.b.b.a ENSGT00940000154197.b.b #22 ENSGT00940000160047 #23 ENSGT00940000161937 #25 ENSGT00940000163537 #26 ENSGT00940000161521 #27 ENSGT00940000162157 #28 ENSGT00940000159364 #29 ENSGT00940000161581 #30 ENSGT00390000008281 #31 ENSGT00390000003062 #33 ENSGT00940000154716 #34 ENSGT00950000183212.C #35 ENSGT00950000183065.B #36 ENSGT00940000154489.B ENSGT00940000162698 #37 ENSGT00940000160649 Olive baboon MODERN SPECIES ENSPANG00000039755 LCE3A (ENSPANG00000037695) LCE3B (ENSPANG00000048883) LCE3C (ENSPANG00000043674) ENSPANG00000041574 ENSPANG00000001479 ENSPANG00000039437 CRCT1 (ENSPANG00000011659) #11 LCE5A (ENSPANG00000018957) CRNN (ENSPANG00000009153) #12 RPTN (ENSPANG00000030992) #16 ENSPANG00000043243 #17 TCHHL1 (ENSPANG00000034098) #18 ENSPANG00000041696 #21 ENSPANG00000007245 S100A10 (ENSPANG00000032390) #22 THEM4 (ENSPANG00000009760) #23 THEM5 (ENSPANG00000033870) #25 C2CD4D (ENSPANG00000002233) #26 RORC (ENSPANG00000020758) #27 LINGO4 (ENSPANG00000007807) #28 TDRKH (ENSPANG00000001986) #29 OAZ3 (ENSPANG00000011815) #30 MRPL9 (ENSPANG00000008737) #31 RIIAD1 (ENSPANG00000015348) #33 CELF3 (ENSPANG00000023526) #34 SNX27 (ENSPANG00000020431) #35 TUFT1 (ENSPANG00000003699) #36 CGN (ENSPANG00000011379) POGZ (ENSPANG00000017623) PSMB4 (ENSPANG00000023527) Cercopithecinae_d ANCESTRAL SPECIES 29 ENSGT00950000183312 ENSGT00950000183278 ENSGT00730000111580 #10 ENSGT00940000161842.b.d.d ENSGT00730000113097 #11 ENSGT00940000161842.a ENSGT00940000162465 #12 ENSGT00940000154467.b.b.b #13 ENSGT00940000154467.a #16 ENSGT00390000014753.l.b ENSGT00940000164620 ENSGT00940000163983 #17 ENSGT00940000162966 #18 ENSGT00940000154172.gb.b.a.c.d #21 ENSGT00420000029746.e.a.b.a.a.a.a.b.b.b.a ENSGT00940000154197.b.b #22 ENSGT00940000160047 #23 ENSGT00940000161937 #25 ENSGT00940000163537 #26 ENSGT00940000161521 #27 ENSGT00940000162157 #28 ENSGT00940000159364 #29 ENSGT00940000161581 #30 ENSGT00390000008281 #31 ENSGT00390000003062 #33 ENSGT00940000154716 #34 ENSGT00950000183212.C #35 ENSGT00950000183065.B #36 ENSGT00940000154489.B ENSGT00940000162698 #37 ENSGT00940000160649 Drill MODERN SPECIES 411 FLG2 (ENSMLEG00000029025) #13 ENSMLEG00000036412 #17 TCHHL1 (ENSMLEG00000042735) #18 ENSMLEG00000030945 #21 ENSMLEG00000036504 S100A10 (ENSMLEG00000010423) #22 THEM4 (ENSMLEG00000041867) #23 THEM5 (ENSMLEG00000037664) #25 RORC (ENSMLEG00000041292) #27 LINGO4 (ENSMLEG00000000178) #28 TDRKH (ENSMLEG00000033882) #29 OAZ3 (ENSMLEG00000035369) #30 MRPL9 (ENSMLEG00000043239) #31 RIIAD1 (ENSMLEG00000040504) #33 CELF3 (ENSMLEG00000028006) #34 SNX27 (ENSMLEG00000036793) #35 TUFT1 (ENSMLEG00000036430) #36 ENSMLEG00000042702 #37 POGZ (ENSMLEG00000031084) PSMB4 (ENSMLEG00000020724) SELENBP1 (ENSMLEG00000043655) Sooty mangabey DUPLICATION Sooty mangabey MODERN SPECIES 448 GLRA2 (ENSCATG00000036546) FANCB (ENSCATG00000034857) MOSPD2 (ENSCATG00000001473) ASB9 (ENSCATG00000036620) ASB11 (ENSCATG00000037691) PIGA (ENSCATG00000040303) VEGFD (ENSCATG00000034073) PIR (ENSCATG00000017482) BMX (ENSCATG00000044540) ACE2 (ENSCATG00000013606) CLTRN (ENSCATG00000032908) CA5B (ENSCATG00000032924) ZRSR2 (ENSCATG00000034085) AP1S2 (ENSCATG00000039294) GRPR (ENSCATG00000035466) ENSCATG00000015601 #22 S100G (ENSCATG00000035072) CTPS2 (ENSCATG00000030123) SYAP1 (ENSCATG00000044882) TXLNG (ENSCATG00000032410) RBBP7 (ENSCATG00000042741) ENSCATG00000037187 REPS2 (ENSCATG00000041359) NHS (ENSCATG00000033217) SCML1 (ENSCATG00000006222) BEND2 (ENSCATG00000036336) SCML2 (ENSCATG00000038994) CDKL5 (ENSCATG00000041616) RS1 (ENSCATG00000029796) PPEF1 (ENSCATG00000043035) ENSCATG00000037972 Sooty mangabey MODERN SPECIES 153 SPRR4 (ENSCATG00000002632) LCE1A (ENSCATG00000017623) ENSCATG00000017677 C1orf68 (ENSCATG00000044855) #10 ENSCATG00000017507 CRCT1 (ENSCATG00000016190) #11 LCE5A (ENSCATG00000017297) CRNN (ENSCATG00000019973) #12 FLG2 (ENSCATG00000044861) #13 RPTN (ENSCATG00000033282) #16 ENSCATG00000008029 TCHH (ENSCATG00000039707) TCHHL1 (ENSCATG00000039351) #18 ENSCATG00000033220 #21 ENSCATG00000029227 ENSCATG00000038312 #22 THEM4 (ENSCATG00000032487) #23 THEM5 (ENSCATG00000044867) #25 C2CD4D (ENSCATG00000002143) #26 RORC (ENSCATG00000034157) #27 LINGO4 (ENSCATG00000021085) #28 TDRKH (ENSCATG00000041878) #29 OAZ3 (ENSCATG00000014157) #30 MRPL9 (ENSCATG00000043909) #31 RIIAD1 (ENSCATG00000021062) #33 CELF3 (ENSCATG00000030846) #34 SNX27 (ENSCATG00000034009) #35 TUFT1 (ENSCATG00000037719) #36 CGN (ENSCATG00000031118) POGZ (ENSCATG00000024127) PSMB4 (ENSCATG00000039167) Macaca ANCESTRAL SPECIES ENSGT00940000161842.b.d.d.b ENSGT00730000111580 #10 ENSGT00940000161842.b.d.d.a.a ENSGT00730000113097 #11 ENSGT00940000161842.a ENSGT00940000162465 #12 ENSGT00940000154467.b.b.b #13 ENSGT00940000154467.b.b.a #14 ENSGT00940000154467.b.a #15 ENSGT00940000154467.a #16 ENSGT00940000163983 #17 ENSGT00390000014753.l.b ENSGT00940000164620 ENSGT00940000162966 #18 ENSGT00420000029746.e.a.b.a.a.a.a.b.b.a ENSGT00940000154197.b.b #22 ENSGT00940000160047 #23 ENSGT00940000161937 #25 ENSGT00940000163537 #26 ENSGT00940000161521 #27 ENSGT00940000162157 #28 ENSGT00940000159364 #29 ENSGT00940000161581 #30 ENSGT00390000008281 #31 ENSGT00390000003062 #33 ENSGT00940000154716 #34 ENSGT00950000183212.C #35 ENSGT00950000183065.B #36 ENSGT00940000162698 #37 ENSGT00940000160649 ENSGT00390000000698 Pig-tailed macaque MODERN SPECIES 262 C1orf68 (ENSMNEG00000033043) #10 ENSMNEG00000035302 ENSMNEG00000033860 ENSMNEG00000023573 CRCT1 (ENSMNEG00000021397) #11 LCE5A (ENSMNEG00000027973) CRNN (ENSMNEG00000041303) #12 FLG2 (ENSMNEG00000042232) #13 RPTN (ENSMNEG00000031148) #16 ENSMNEG00000032914 TCHH (ENSMNEG00000033147) TCHHL1 (ENSMNEG00000030875) #18 ENSMNEG00000032093 ENSMNEG00000032935 #21 ENSMNEG00000041444 S100A10 (ENSMNEG00000033842) #22 ENSMNEG00000044777 #23 THEM5 (ENSMNEG00000040359) #25 C2CD4D (ENSMNEG00000020684) #26 RORC (ENSMNEG00000041238) #27 LINGO4 (ENSMNEG00000028221) #28 TDRKH (ENSMNEG00000021524) #29 OAZ3 (ENSMNEG00000043875) #30 MRPL9 (ENSMNEG00000020504) #31 RIIAD1 (ENSMNEG00000033990) #33 CELF3 (ENSMNEG00000044120) #34 SNX27 (ENSMNEG00000033985) #35 TUFT1 (ENSMNEG00000040638) #36 ENSMNEG00000029723 #37 POGZ (ENSMNEG00000038332) PSMB4 (ENSMNEG00000028484) Macaca_a ANCESTRAL SPECIES ENSGT00950000183301.h.a.a ENSGT00730000111554 ENSGT00940000161842.b.d.d.a.b ENSGT00390000000628.w.a.a.b.a ENSGT00730000113097 #11 ENSGT00940000161842.a ENSGT00940000162465 #12 ENSGT00940000154467.b.b.b #13 ENSGT00940000154467.b.b.a #14 ENSGT00940000154467.b.a #15 ENSGT00940000154467.a #16 ENSGT00940000163983 #17 ENSGT00940000162966 #18 ENSGT00940000153299.c.b.b.b.c.a ENSGT00420000029746.e.a.b.a.a.a.a.b.b.a ENSGT00940000154197.b.b #22 ENSGT00940000160047 #23 ENSGT00940000161937 #25 ENSGT00940000163537 #26 ENSGT00940000161521 #27 ENSGT00940000162157 #28 ENSGT00940000159364 #29 ENSGT00940000161581 #30 ENSGT00390000008281 #31 ENSGT00390000003062 #33 ENSGT00940000154716 #34 ENSGT00950000183212.C #35 ENSGT00950000183065.B #36 ENSGT00940000162698 #37 ENSGT00940000160649 ENSGT00390000000698 Crab-eating macaque MODERN SPECIES ENSMFAG00000058045 KPRP (ENSMFAG00000065755) ENSMFAG00000054616 ENSMFAG00000020533 LCE5A (ENSMFAG00000030064) CRNN (ENSMFAG00000039664) #12 ENSMFAG00000037107 #13 FLG (ENSMFAG00000052909) #14 HRNR (ENSMFAG00000047345) #15 RPTN (ENSMFAG00000054571) #16 ENSMFAG00000049602 #17 TCHHL1 (ENSMFAG00000065203) #18 ENSMFAG00000053564 ENSMFAG00000051097 #21 ENSMFAG00000049673 S100A10 (ENSMFAG00000044914) #22 THEM4 (ENSMFAG00000032182) #23 RORC (ENSMFAG00000000807) #27 LINGO4 (ENSMFAG00000029272) #28 TDRKH (ENSMFAG00000041641) #29 OAZ3 (ENSMFAG00000000682) #30 MRPL9 (ENSMFAG00000000874) #31 RIIAD1 (ENSMFAG00000042291) #33 CELF3 (ENSMFAG00000040182) #34 SNX27 (ENSMFAG00000030490) #35 TUFT1 (ENSMFAG00000034076) #36 ENSMFAG00000003431 #37 POGZ (ENSMFAG00000043596) ENSMFAG00000054881 PSMB4 (ENSMFAG00000033442) SELENBP1 (ENSMFAG00000033465) Rhesus MODERN SPECIES KPRP (ENSMMUG00000051816) ENSMMUG00000049843 ENSMMUG00000049286 ENSMMUG00000050804 CRCT1 (ENSMMUG00000058456) #11 LCE5A (ENSMMUG00000001967) CRNN (ENSMMUG00000009040) #12 FLG2 (ENSMMUG00000059472) #13 ENSMMUG00000054850 RPTN (ENSMMUG00000019033) #16 TCHH (ENSMMUG00000056263) TCHHL1 (ENSMMUG00000020209) #18 ENSMMUG00000045342 ENSMMUG00000004441 #21 ENSMMUG00000042487 S100A10 (ENSMMUG00000052533) #22 THEM4 (ENSMMUG00000014361) #25 C2CD4D (ENSMMUG00000014358) #26 RORC (ENSMMUG00000012138) #27 LINGO4 (ENSMMUG00000012137) #28 TDRKH (ENSMMUG00000009096) #29 OAZ3 (ENSMMUG00000009095) #30 MRPL9 (ENSMMUG00000009094) #31 RIIAD1 (ENSMMUG00000016955) #33 CELF3 (ENSMMUG00000016952) #34 SNX27 (ENSMMUG00000016920) #35 TUFT1 (ENSMMUG00000021260) #36 CGN (ENSMMUG00000021259) #37 POGZ (ENSMMUG00000020925) PSMB4 (ENSMMUG00000020924) SELENBP1 (ENSMMUG00000045396) Euarchontoglires_A ANCESTRAL SPECIES ENSGT00730000111554 ENSGT00730000111580 #10 ENSGT00940000161842.b ENSGT00940000163498 ENSGT00940000163905 ENSGT00940000161842.a ENSGT00940000162465 #12 ENSGT00940000154467.b.b.b #13 ENSGT00940000154467.b.b.a #14 ENSGT00940000170498 ENSGT00940000154467.b.a #15 ENSGT00940000154467.a #16 ENSGT00940000163983 #17 ENSGT00940000162966 #18 ENSGT00940000154172 #21 ENSGT00940000154197.b.b #22 ENSGT00940000160047 #23 ENSGT00940000161937 #25 ENSGT00940000163537 #26 ENSGT00940000161521 #27 ENSGT00940000162157 #28 ENSGT00940000159364 #29 ENSGT00940000161581 #30 ENSGT00390000008281 #31 ENSGT00390000003062 #33 ENSGT00940000154716 #34 ENSGT00950000183212.C #35 ENSGT00950000183065.B #36 ENSGT00940000162698 #37 ENSGT00940000160649 ENSGT00390000000698 Tree shrew MODERN SPECIES 4986 ENSTBEG00000016491 ENSTBEG00000016356 #18 ENSTBEG00000016141 #21 S100A10 (ENSTBEG00000016106) #22 Glires ANCESTRAL SPECIES ENSGT00730000111554 ENSGT00730000111580 #10 ENSGT00940000161842.b ENSGT00940000163498 ENSGT00940000163905 ENSGT00940000161842.a ENSGT00940000162465 #12 ENSGT00940000154467.b.b.b #13 ENSGT00940000154467.b.b.a #14 ENSGT00940000170498 ENSGT00940000154467.b.a #15 ENSGT00940000154467.a #16 ENSGT00940000163983 #17 ENSGT00940000162966 #18 ENSGT00940000154172 #21 ENSGT00940000154197.b.b #22 ENSGT00940000160047 #23 ENSGT00940000161937 #25 ENSGT00940000163537 #26 ENSGT00940000161521 #27 ENSGT00940000162157 #28 ENSGT00940000159364 #29 ENSGT00940000161581 #30 ENSGT00390000008281 #31 ENSGT00390000003062 #33 ENSGT00940000154716 #34 ENSGT00950000183212.C #35 ENSGT00950000183065.B #36 ENSGT00940000162698 #37 ENSGT00940000160649 ENSGT00390000000698 Lagomorpha ANCESTRAL SPECIES 1 ENSGT00940000162189 ENSGT00940000161606 ENSGT00940000164092 ENSGT00940000163019.b ENSGT00940000165746 ENSGT00940000164168 ENSGT00950000183278 ENSGT00950000183301 ENSGT00940000163498 ENSGT00940000162465 #12 ENSGT00940000154467.b.b.b #13 ENSGT00940000170498 ENSGT00940000154467.b.a #15 ENSGT00940000163983 #17 ENSGT00940000162966 #18 ENSGT00940000154197.b.b #22 ENSGT00940000160047 #23 ENSGT00940000161937 #25 ENSGT00940000161521 #27 ENSGT00940000162157 #28 ENSGT00940000159364 #29 ENSGT00940000161581 #30 ENSGT00390000008281 #31 ENSGT00390000003062 #33 ENSGT00940000154716 #34 ENSGT00950000183212.C #35 ENSGT00950000183065.B #36 ENSGT00940000162698 #37 ENSGT00940000160649 ENSGT00390000000698 ENSGT00390000014244 Rabbit MODERN SPECIES 4 ENSOCUG00000026830 ENSOCUG00000033134 ENSOCUG00000025593 ENSOCUG00000032235 ENSOCUG00000031729 ENSOCUG00000033213 C1orf68 (ENSOCUG00000015200) #10 ENSOCUG00000032926 ENSOCUG00000008547 CRNN (ENSOCUG00000011842) #12 ENSOCUG00000011836 #13 ENSOCUG00000037250 ENSOCUG00000033132 #15 ENSOCUG00000005205 #17 TCHHL1 (ENSOCUG00000004732) #18 ENSOCUG00000005198 #22 ENSOCUG00000005194 #23 THEM5 (ENSOCUG00000009679) #25 RORC (ENSOCUG00000022907) #27 LINGO4 (ENSOCUG00000001389) #28 ENSOCUG00000001387 #29 OAZ3 (ENSOCUG00000001385) #30 ENSOCUG00000001383 #31 RIIAD1 (ENSOCUG00000021414) #33 CELF3 (ENSOCUG00000003551) #34 SNX27 (ENSOCUG00000007428) #35 TUFT1 (ENSOCUG00000012659) #36 CGN (ENSOCUG00000012640) #37 POGZ (ENSOCUG00000004849) PSMB4 (ENSOCUG00000015257) SELENBP1 (ENSOCUG00000003371) Rodentia ANCESTRAL SPECIES ENSGT00730000111580 #10 ENSGT00940000161842.b ENSGT00940000163498 ENSGT00940000163905 ENSGT00940000161842.a ENSGT00940000162465 #12 ENSGT00940000154467.b.b.b #13 ENSGT00940000154467.b.b.a #14 ENSGT00940000170498 ENSGT00940000154467.b.a #15 ENSGT00940000154467.a #16 ENSGT00940000163983 #17 ENSGT00940000164620 ENSGT00940000162966 #18 ENSGT00940000154172 #21 ENSGT00940000154197.b.b #22 ENSGT00940000160047 #23 ENSGT00940000161937 #25 ENSGT00940000163537 #26 ENSGT00940000161521 #27 ENSGT00940000162157 #28 ENSGT00940000159364 #29 ENSGT00940000161581 #30 ENSGT00390000008281 #31 ENSGT00390000003062 #33 ENSGT00940000154716 #34 ENSGT00950000183212.C #35 ENSGT00950000183065.B #36 ENSGT00940000162698 #37 ENSGT00940000160649 ENSGT00390000000698 Rodentia_B ANCESTRAL SPECIES ENSGT00940000162349 ENSGT00940000162657 ENSGT00700000104637 ENSGT00730000111592 ENSGT00730000111554 ENSGT00940000161842.a ENSGT00940000162465 #12 ENSGT00940000154467.b.b.b #13 ENSGT00940000154467.b.b.a #14 ENSGT00940000154467.b.a #15 ENSGT00940000154467.a #16 ENSGT00940000163983 #17 ENSGT00940000164620 ENSGT00940000162966 #18 ENSGT00940000154172 #21 ENSGT00940000154197.b.b #22 ENSGT00940000160047 #23 ENSGT00940000161937 #25 ENSGT00940000163537 #26 ENSGT00940000161521 #27 ENSGT00940000162157 #28 ENSGT00940000159364 #29 ENSGT00940000161581 #30 ENSGT00390000008281 #31 ENSGT00390000003062 #33 ENSGT00940000154716 #34 ENSGT00950000183212.C #35 ENSGT00950000183065.B #36 ENSGT00940000162698 #37 ENSGT00940000160649 ENSGT00390000000698 Myomorpha ANCESTRAL SPECIES 12 ENSGT00940000161606 ENSGT00940000162349 ENSGT00940000162657 ENSGT00700000104637 ENSGT00730000111592 ENSGT00730000111554 ENSGT00940000162465 #12 ENSGT00940000154467.b.b.b #13 ENSGT00940000154467.b.b.a #14 ENSGT00940000154467.b.a #15 ENSGT00940000154467.a #16 ENSGT00940000163983 #17 ENSGT00940000164620 ENSGT00940000162966 #18 ENSGT00940000154172 #21 ENSGT00940000154197.b.b #22 ENSGT00940000160047 #23 ENSGT00940000161937 #25 ENSGT00940000163537 #26 ENSGT00940000161521 #27 ENSGT00940000162157 #28 ENSGT00940000159364 #29 ENSGT00940000161581 #30 ENSGT00390000008281 #31 ENSGT00390000003062 #33 ENSGT00940000154716 #34 ENSGT00950000183212.C #35 ENSGT00950000183065.B #36 ENSGT00940000162698 #37 ENSGT00940000160649 ENSGT00390000000698 Muroidea ANCESTRAL SPECIES 6 ENSGT00780000122937 ENSGT00940000169512 ENSGT00730000111580 #10 ENSGT00940000163710 ENSGT01010000222956 ENSGT01100000265211 ENSGT00940000162465 #12 ENSGT00940000154467.b.b.b #13 ENSGT00940000154467.b.b.a #14 ENSGT00940000154467.b.a #15 ENSGT00940000154467.a #16 ENSGT00940000163983 #17 ENSGT00940000164620 ENSGT00940000162966 #18 ENSGT00940000154172 #21 ENSGT00940000154197.b.b #22 ENSGT00940000160047 #23 ENSGT00940000161937 #25 ENSGT00940000163537 #26 ENSGT00940000161521 #27 ENSGT00940000162157 #28 ENSGT00940000159364 #29 ENSGT00940000161581 #30 ENSGT00390000008281 #31 ENSGT00390000003062 #33 ENSGT00940000154716 #34 ENSGT00950000183212.C #35 ENSGT00950000183065.B #36 ENSGT00940000162698 #37 ENSGT00940000160649 ENSGT00390000000698 Muroidea_A ANCESTRAL SPECIES 5 ENSGT00730000111554 ENSGT00730000111580 #10 ENSGT00940000163905 ENSGT00940000163710.q.a ENSGT01010000222956 ENSGT00860000136028 ENSGT00940000162465 #12 ENSGT00940000154467.b.b.b #13 ENSGT00940000154467.b.b.a #14 ENSGT00940000154467.b.a #15 ENSGT00940000154467.a #16 ENSGT00940000163983 #17 ENSGT00940000164620 ENSGT00940000162966 #18 ENSGT00940000154172 #21 ENSGT00940000154197.b.b #22 ENSGT00940000154376.b.e.a ENSGT00940000160047 #23 ENSGT00940000161937 #25 ENSGT00940000163537 #26 ENSGT00940000161521 #27 ENSGT00940000162157 #28 ENSGT00940000159364 #29 ENSGT00940000161581 #30 ENSGT00390000008281 #31 ENSGT00390000003062 #33 ENSGT00940000154716 #34 ENSGT00950000183212.C #35 ENSGT00950000183065.B #36 ENSGT00940000162698 #37 ENSGT00940000160649 Cricetidae ANCESTRAL SPECIES 6 ENSGT00780000122937 ENSGT00940000167222 ENSGT01050000245068.A ENSGT00940000161842.a.c ENSGT00730000111554 ENSGT00730000111580 #10 ENSGT00940000163905 ENSGT01100000265211 ENSGT00940000162465 #12 ENSGT00940000154467.b.b.b #13 ENSGT00940000154467.b.b.a #14 ENSGT00940000154467.a #16 ENSGT00940000163983 #17 ENSGT00940000162966 #18 ENSGT00940000154172 #21 ENSGT00940000154197.b.b #22 ENSGT00940000154376.b.e.a ENSGT00940000160047 #23 ENSGT00940000161937 #25 ENSGT00940000163537 #26 ENSGT00940000161521 #27 ENSGT00940000162157 #28 ENSGT00940000159364 #29 ENSGT00940000161581 #30 ENSGT00390000008281 #31 ENSGT00390000003062 #33 ENSGT00940000154716 #34 ENSGT00950000183212.C #35 ENSGT00950000183065.B #36 ENSGT00940000162698 #37 ENSGT00940000160649 Cricetidae_B ANCESTRAL SPECIES 3 ENSGT00730000114093 ENSGT00780000122937 ENSGT00940000167222 ENSGT00940000161842.a.c ENSGT00730000111554 ENSGT00730000111580 #10 ENSGT00940000163905 ENSGT01100000265211 ENSGT00940000162465 #12 ENSGT00940000154467.b.b.b #13 ENSGT00940000154467.b.b.a #14 ENSGT00940000154467.a #16 ENSGT00940000164620 ENSGT00940000162966 #18 ENSGT00940000154172 #21 ENSGT00940000154197.b.b #22 ENSGT00940000154376.b.e.a ENSGT00940000160047 #23 ENSGT00940000161937 #25 ENSGT00940000163537 #26 ENSGT00940000161521 #27 ENSGT00940000162157 #28 ENSGT00940000159364 #29 ENSGT00940000161581 #30 ENSGT00390000008281 #31 ENSGT00390000003062 #33 ENSGT00940000154716 #34 ENSGT00950000183212.C #35 ENSGT00950000183065.B #36 ENSGT00940000162698 #37 ENSGT00940000160649 Northern American deer mouse DUPLICATION Northern American deer mouse MODERN SPECIES 19 ENSPEMG00000002108 Kprp (ENSPEMG00000003567) ENSPEMG00000007888 ENSPEMG00000024567 ENSPEMG00000028390 ENSPEMG00000030519 ENSPEMG00000025047 Crct1 (ENSPEMG00000025851) Lce1m (ENSPEMG00000028998) Crnn (ENSPEMG00000015891) #12 ENSPEMG00000027135 #13 ENSPEMG00000029220 #14 ENSPEMG00000009460 #16 Tchhl1 (ENSPEMG00000023251) #18 S100a11 (ENSPEMG00000027141) #21 ENSPEMG00000028727 #22 ENSPEMG00000028073 ENSPEMG00000010771 Them4 (ENSPEMG00000017604) #23 Them5 (ENSPEMG00000009567) #25 C2cd4d (ENSPEMG00000029177) #26 Rorc (ENSPEMG00000019266) #27 Lingo4 (ENSPEMG00000002211) #28 Tdrkh (ENSPEMG00000011171) #29 Oaz3 (ENSPEMG00000008922) #30 Mrpl9 (ENSPEMG00000011374) #31 Riiad1 (ENSPEMG00000019003) #33 Celf3 (ENSPEMG00000001184) #34 Snx27 (ENSPEMG00000009710) #35 Tuft1 (ENSPEMG00000014366) #36 ENSPEMG00000015782 #37 Northern American deer mouse MODERN SPECIES 11 Hacd4 (ENSPEMG00000016283) ENSPEMG00000013210 Focad (ENSPEMG00000000124) ENSPEMG00000008739 ENSPEMG00000029974 Slc24a2 (ENSPEMG00000019954) Acer2 (ENSPEMG00000020047) ENSPEMG00000020062 Dennd4c (ENSPEMG00000020187) Plin2 (ENSPEMG00000020242) Haus6 (ENSPEMG00000028376) Rraga (ENSPEMG00000012776) Saxo1 (ENSPEMG00000000040) Adamtsl1 (ENSPEMG00000005320) Sh3gl2 (ENSPEMG00000010691) ENSPEMG00000012875 #22 Cntln (ENSPEMG00000013809) Bnc2 (ENSPEMG00000006553) ENSPEMG00000026637 Ccdc171 (ENSPEMG00000009589) Psip1 (ENSPEMG00000015309) Snapc3 (ENSPEMG00000015671) Ttc39b (ENSPEMG00000017249) ENSPEMG00000028674 Frem1 (ENSPEMG00000007771) Cer1 (ENSPEMG00000013498) Zdhhc21 (ENSPEMG00000011202) Nfib (ENSPEMG00000015036) Mpdz (ENSPEMG00000002221) Lurap1l (ENSPEMG00000028913) ENSPEMG00000026523 Prairie vole MODERN SPECIES 99 ENSMOCG00000005972 ENSMOCG00000004279 ENSMOCG00000005788 Kprp (ENSMOCG00000005848) ENSMOCG00000005487 2310050C09Rik (ENSMOCG00000000973) #10 ENSMOCG00000008570 ENSMOCG00000010107 ENSMOCG00000021258 ENSMOCG00000004193 Crnn (ENSMOCG00000019488) #12 ENSMOCG00000022052 ENSMOCG00000000629 ENSMOCG00000007199 Tchhl1 (ENSMOCG00000021433) #18 S100a10 (ENSMOCG00000004139) #22 ENSMOCG00000022418 ENSMOCG00000022803 ENSMOCG00000015444 ENSMOCG00000016759 Cricetinae ANCESTRAL SPECIES 13 ENSGT01050000245068.A ENSGT01070000254540 ENSGT01050000245068.B ENSGT00940000161842.a.c ENSGT00730000111554 ENSGT00730000111580 #10 ENSGT00940000163905 ENSGT01100000266463 ENSGT00940000162465 #12 ENSGT00940000154467.b.b.b #13 ENSGT00940000154467.b.b.a #14 ENSGT00940000154467.a #16 ENSGT00940000163983 #17 ENSGT00940000162966 #18 ENSGT00940000154172 #21 ENSGT00940000154197.b.b #22 Golden Hamster DUPLICATION Golden Hamster MODERN SPECIES 714 ENSMAUG00000008992 ENSMAUG00000014317 ENSMAUG00000021993 ENSMAUG00000018162 ENSMAUG00000018011 Kprp (ENSMAUG00000009358) ENSMAUG00000009030 2310050C09Rik (ENSMAUG00000021982) #10 ENSMAUG00000008983 ENSMAUG00000009303 ENSMAUG00000009142 ENSMAUG00000003498 Crnn (ENSMAUG00000001754) #12 Tchhl1 (ENSMAUG00000017940) #18 S100a11 (ENSMAUG00000019826) #21 ENSMAUG00000021385 #22 Golden Hamster MODERN SPECIES 740 ENSMAUG00000006579 Tyrp1 (ENSMAUG00000017874) Lurap1l (ENSMAUG00000014887) ENSMAUG00000005222 ENSMAUG00000003146 Nfib (ENSMAUG00000007632) Zdhhc21 (ENSMAUG00000000495) Cer1 (ENSMAUG00000013311) Frem1 (ENSMAUG00000014922) ENSMAUG00000011212 #22 Ttc39b (ENSMAUG00000008949) ENSMAUG00000002025 ENSMAUG00000008531 Psip1 (ENSMAUG00000014312) Ccdc171 (ENSMAUG00000013269) Bnc2 (ENSMAUG00000017038) Cntln (ENSMAUG00000016827) Chinese hamster chok1gshd MODERN SPECIES 352 Kprp (ENSCGRG00001011269) ENSCGRG00001013323 ENSCGRG00001011007 ENSCGRG00001011825 ENSCGRG00001011142 ENSCGRG00001011125 ENSCGRG00001010698 ENSCGRG00001010946 Crnn (ENSCGRG00001009912) #12 Flg2 (ENSCGRG00001004341) #13 ENSCGRG00001024443 #14 ENSCGRG00001013639 #16 ENSCGRG00001017115 #17 Tchhl1 (ENSCGRG00001014681) #18 S100a11 (ENSCGRG00001023641) #21 S100a10 (ENSCGRG00001013243) #22 Murinae ANCESTRAL SPECIES 5 ENSGT00960000186821 ENSGT00730000111554 ENSGT00730000111580 #10 ENSGT00940000163710.q.a ENSGT01010000222956 ENSGT00860000136028 ENSGT00940000162465 #12 ENSGT00940000154467.b.b.b #13 ENSGT00940000154467.b.b.a #14 ENSGT00940000154467.b.a #15 ENSGT00940000154467.a #16 ENSGT00940000163983 #17 ENSGT00940000164620 ENSGT00940000162966 #18 ENSGT00940000154172 #21 ENSGT00940000154197.b.b #22 ENSGT00940000154376.b.e.a.k ENSGT00940000160047 #23 ENSGT00940000161937 #25 ENSGT00940000163537 #26 ENSGT00940000161521 #27 ENSGT00940000162157 #28 ENSGT00940000159364 #29 ENSGT00940000161581 #30 ENSGT00390000008281 #31 ENSGT00390000003062 #33 ENSGT00940000154716 #34 ENSGT00950000183212.C #35 ENSGT00950000183065.B #36 ENSGT00940000162698 #37 ENSGT00940000160649 Mus ANCESTRAL SPECIES 7 ENSGT00730000111554 ENSGT00950000183531.b ENSGT00730000111580 #10 ENSGT00940000163710.q.a.b.a.a ENSGT00940000163710.q.a.a ENSGT01010000222956 ENSGT00860000136028 ENSGT00940000162465 #12 ENSGT00940000154467.b.b.b #13 ENSGT00940000154467.b.b.a #14 ENSGT00940000154467.b.a #15 ENSGT00940000154467.a #16 ENSGT00940000164620 ENSGT00940000162966 #18 ENSGT00940000154172 #21 ENSGT00940000154197.b.b #22 ENSGT00940000160047 #23 ENSGT00940000161937 #25 ENSGT00940000163537 #26 ENSGT00940000161521 #27 ENSGT00940000162157 #28 ENSGT00940000159364 #29 ENSGT00940000161581 #30 ENSGT00390000008281 #31 ENSGT00390000003062 #33 ENSGT00940000154716 #34 ENSGT00950000183212.C #35 ENSGT00950000183065.B #36 ENSGT00940000162698 #37 ENSGT00940000160649 ENSGT00390000000698 Mus_A ANCESTRAL SPECIES 9 ENSGT00950000183531.b ENSGT00730000111580 #10 ENSGT00940000163710.q.a.b.a.a ENSGT00940000163710.q.a.a ENSGT01010000222956 ENSGT00860000136028 ENSGT00940000162465 #12 ENSGT00940000154467.b.b.b #13 ENSGT00940000154467.b.b.a #14 ENSGT00940000154467.b.a #15 ENSGT00940000154467.a #16 ENSGT00940000153096.b.d.s.b ENSGT00940000164620 ENSGT00940000162966 #18 ENSGT00940000154172 #21 ENSGT00940000154197.b.b #22 ENSGT00940000160047 #23 ENSGT00940000161937 #25 ENSGT00940000163537 #26 ENSGT00940000161521 #27 ENSGT00940000162157 #28 ENSGT00940000159364 #29 ENSGT00940000161581 #30 ENSGT00390000008281 #31 ENSGT00390000003062 #33 ENSGT00940000154716 #34 ENSGT00950000183212.C #35 ENSGT00950000183065.B #36 ENSGT00940000162698 #37 ENSGT00940000160649 ENSGT00390000000698 Ryukyu mouse MODERN SPECIES 12 MGP_CAROLIEiJ_G0025289 MGP_CAROLIEiJ_G0025290 MGP_CAROLIEiJ_G0025291 MGP_CAROLIEiJ_G0025292 Crct1 (MGP_CAROLIEiJ_G0025293) Lce1m (MGP_CAROLIEiJ_G0025294) Crnn (MGP_CAROLIEiJ_G0025295) #12 MGP_CAROLIEiJ_G0025296 #13 Flg (MGP_CAROLIEiJ_G0025297) #14 MGP_CAROLIEiJ_G0025298 MGP_CAROLIEiJ_G0025299 #16 MGP_CAROLIEiJ_G0025300 MGP_CAROLIEiJ_G0025301 Tchhl1 (MGP_CAROLIEiJ_G0025302) #18 S100a11 (MGP_CAROLIEiJ_G0025303) #21 S100a10 (MGP_CAROLIEiJ_G0025304) #22 MGP_CAROLIEiJ_G0025305 #23 MGP_CAROLIEiJ_G0025306 #25 C2cd4d (MGP_CAROLIEiJ_G0025307) #26 Rorc (MGP_CAROLIEiJ_G0025308) #27 Lingo4 (MGP_CAROLIEiJ_G0025309) #28 Tdrkh (MGP_CAROLIEiJ_G0025310) #29 MGP_CAROLIEiJ_G0025311 #30 Mrpl9 (MGP_CAROLIEiJ_G0025312) #31 Riiad1 (MGP_CAROLIEiJ_G0025313) #33 Celf3 (MGP_CAROLIEiJ_G0025314) #34 Snx27 (MGP_CAROLIEiJ_G0025315) #35 Tuft1 (MGP_CAROLIEiJ_G0025316) #36 MGP_CAROLIEiJ_G0025317 MGP_CAROLIEiJ_G0025318 #37 Pogz (MGP_CAROLIEiJ_G0025319) Mus_B ANCESTRAL SPECIES 8 ENSGT00950000183531.b ENSGT00730000111580 #10 ENSGT00940000163710.q.a.b.a.a ENSGT00940000163710.q.a.a ENSGT01010000222956 ENSGT00860000136028 ENSGT00940000162465 #12 ENSGT00940000154467.b.b.b #13 ENSGT00940000154467.b.b.a #14 ENSGT00940000154467.b.a #15 ENSGT00940000154467.a #16 ENSGT00940000153096.b.d.s.b ENSGT00940000164620 ENSGT00940000162966 #18 ENSGT00940000154172.kb.a #21 ENSGT00940000154197.b.b #22 ENSGT00940000160047 #23 ENSGT00940000161937 #25 ENSGT00940000163537 #26 ENSGT00940000161521 #27 ENSGT00940000162157 #28 ENSGT00940000159364 #29 ENSGT00940000161581 #30 ENSGT00390000008281 #31 ENSGT00390000003062 #33 ENSGT00940000154716 #34 ENSGT00950000183212.C #35 ENSGT00950000183065.B #36 ENSGT00940000162698 #37 ENSGT00940000160649 ENSGT00390000000698 Mouse MODERN SPECIES 12 Lce3c (ENSMUSG00000045475) Lce3d (ENSMUSG00000043472) Lce3e (ENSMUSG00000074433) Lce3f (ENSMUSG00000068885) Crct1 (ENSMUSG00000027913) Lce1m (ENSMUSG00000027912) Tdpoz8 (ENSMUSG00000096879) Crnn (ENSMUSG00000078657) #12 Flg2 (ENSMUSG00000049133) #13 Flg (ENSMUSG00000102439) #14 Hrnr (ENSMUSG00000041991) #15 Rptn (ENSMUSG00000041984) #16 Tchh (ENSMUSG00000052415) Tchhl1 (ENSMUSG00000027908) #18 S100a11 (ENSMUSG00000027907) #21 S100a10 (ENSMUSG00000041959) #22 Tdpoz2 (ENSMUSG00000103362) Tdpoz1 (ENSMUSG00000094084) Gm5773 (ENSMUSG00000068879) Tdpoz4 (ENSMUSG00000060256) Tdpoz3 (ENSMUSG00000058005) Tdpoz9-ps1 (ENSMUSG00000095822) Tdpoz5 (ENSMUSG00000094163) Tdpoz9 (ENSMUSG00000094328) Tdpoz7 (ENSMUSG00000095251) Spopfm2 (ENSMUSG00000074424) Spopfm3 (ENSMUSG00000090268) Them4 (ENSMUSG00000028145) #23 Them5 (ENSMUSG00000028148) #25 C2cd4d (ENSMUSG00000091648) #26 Rorc (ENSMUSG00000028150) #27 Mus_C ANCESTRAL SPECIES 6 ENSGT00950000184448 ENSGT00730000111554 ENSGT00950000183531.b ENSGT00730000111580 #10 ENSGT00940000163710.q.a.a ENSGT01010000222956 ENSGT00860000136028 ENSGT00940000162465 #12 ENSGT00940000154467.b.b.a #14 ENSGT00940000154467.b.a #15 ENSGT00940000154467.a #16 ENSGT00940000153096.b.d.s.b ENSGT00940000164620 ENSGT00940000162966 #18 ENSGT00940000154172.kb.a #21 ENSGT00940000154197.b.b #22 ENSGT00940000160047 #23 ENSGT00940000161937 #25 ENSGT00940000163537 #26 ENSGT00940000161521 #27 ENSGT00940000162157 #28 ENSGT00940000159364 #29 ENSGT00940000161581 #30 ENSGT00390000008281 #31 ENSGT00390000003062 #33 ENSGT00940000154716 #34 ENSGT00950000183212.C #35 ENSGT00950000183065.B #36 ENSGT00940000162698 #37 ENSGT00940000160649 ENSGT00390000000698 Steppe mouse MODERN SPECIES 2268 ENSMSIG00000013333 #15 ENSMSIG00000013325 #16 ENSMSIG00000013304 ENSMSIG00000013297 #16 Tchhl1 (ENSMSIG00000013282) #18 ENSMSIG00000013266 #21 S100a10 (ENSMSIG00000013252) #22 spretus MODERN SPECIES 12 Lce1k (MGP_SPRETEiJ_G0026229) Kprp (MGP_SPRETEiJ_G0026231) Lce1l (MGP_SPRETEiJ_G0026232) 2310050C09Rik (MGP_SPRETEiJ_G0026233) #10 MGP_SPRETEiJ_G0026234 MGP_SPRETEiJ_G0026235 Crct1 (MGP_SPRETEiJ_G0026236) Lce1m (MGP_SPRETEiJ_G0026237) Crnn (MGP_SPRETEiJ_G0026238) #12 Flg (MGP_SPRETEiJ_G0026240) #14 MGP_SPRETEiJ_G0026241 #16 MGP_SPRETEiJ_G0026242 Tchh (MGP_SPRETEiJ_G0026243) Tchhl1 (MGP_SPRETEiJ_G0026244) #18 MGP_SPRETEiJ_G0026245 #21 S100a10 (MGP_SPRETEiJ_G0026246) #22 Them4 (MGP_SPRETEiJ_G0026247) #23 Them5 (MGP_SPRETEiJ_G0026248) #25 C2cd4d (MGP_SPRETEiJ_G0026249) #26 Rorc (MGP_SPRETEiJ_G0026250) #27 Lingo4 (MGP_SPRETEiJ_G0026251) #28 Tdrkh (MGP_SPRETEiJ_G0026252) #29 MGP_SPRETEiJ_G0026253 #30 Mrpl9 (MGP_SPRETEiJ_G0026254) #31 Riiad1 (MGP_SPRETEiJ_G0026255) #33 Celf3 (MGP_SPRETEiJ_G0026256) #34 Snx27 (MGP_SPRETEiJ_G0026257) #35 MGP_SPRETEiJ_G0026258 #36 MGP_SPRETEiJ_G0026259 MGP_SPRETEiJ_G0026260 #37 Pogz (MGP_SPRETEiJ_G0026261) Shrew mouse MODERN SPECIES 17 Lce1l (MGP_PahariEiJ_G0026731) 2310050C09Rik (MGP_PahariEiJ_G0026732) #10 MGP_PahariEiJ_G0026733 MGP_PahariEiJ_G0026734 MGP_PahariEiJ_G0026735 MGP_PahariEiJ_G0026736 MGP_PahariEiJ_G0026737 MGP_PahariEiJ_G0026738 Crct1 (MGP_PahariEiJ_G0026739) Lce1m (MGP_PahariEiJ_G0026740) Crnn (MGP_PahariEiJ_G0026741) #12 MGP_PahariEiJ_G0026742 #13 MGP_PahariEiJ_G0026744 Tchhl1 (MGP_PahariEiJ_G0026745) #18 S100a11 (MGP_PahariEiJ_G0026746) #21 S100a10 (MGP_PahariEiJ_G0026747) #22 Them4 (MGP_PahariEiJ_G0026748) #23 Them5 (MGP_PahariEiJ_G0026749) #25 C2cd4d (MGP_PahariEiJ_G0026750) #26 Rorc (MGP_PahariEiJ_G0026751) #27 Lingo4 (MGP_PahariEiJ_G0026752) #28 Tdrkh (MGP_PahariEiJ_G0026753) #29 MGP_PahariEiJ_G0026754 #30 Mrpl9 (MGP_PahariEiJ_G0026755) #31 MGP_PahariEiJ_G0026756 #33 Celf3 (MGP_PahariEiJ_G0026757) #34 Snx27 (MGP_PahariEiJ_G0026758) #35 Tuft1 (MGP_PahariEiJ_G0026759) #36 MGP_PahariEiJ_G0026760 #37 Pogz (MGP_PahariEiJ_G0026761) Psmb4 (MGP_PahariEiJ_G0026762) Rat MODERN SPECIES 11 LOC120100589 (ENSRNOG00000064953) Lce3fl1 (ENSRNOG00000063005) Crct1 (ENSRNOG00000009574) Lce1m (ENSRNOG00000009581) ENSRNOG00000065518 Crnn (ENSRNOG00000008721) #12 ENSRNOG00000064129 #13 ENSRNOG00000069536 #16 ENSRNOG00000064486 #15 Rptn (ENSRNOG00000018679) #16 Tchh (ENSRNOG00000069082) #16 Tchh (ENSRNOG00000056746) #17 Tchhl1 (ENSRNOG00000009610) #18 ENSRNOG00000065314 S100a11 (ENSRNOG00000010105) #21 S100a10 (ENSRNOG00000023226) #22 Tdpoz1-ps4 (ENSRNOG00000066364) RGD1566337 (ENSRNOG00000063844) LOC100911679 (ENSRNOG00000063988) RGD1564313 (ENSRNOG00000064397) Tdpoz2l1 (ENSRNOG00000062928) AABR07012426.1 (ENSRNOG00000050263) LOC120100595 (ENSRNOG00000065808) Tdpoz1-ps13 (ENSRNOG00000063069) Tdpoz1-ps14 (ENSRNOG00000063985) LOC120101040 (ENSRNOG00000070497) LOC120101042 (ENSRNOG00000064402) LOC120101043 (ENSRNOG00000068421) Tdpoz1-ps9 (ENSRNOG00000069915) Tdpoz2 (ENSRNOG00000065162) LOC102553503 (ENSRNOG00000064598) Upper Galilee mountains blind mole rat MODERN SPECIES 593 ENSNGAG00000015477 #16 S100a11 (ENSNGAG00000016757) #21 S100a10 (ENSNGAG00000011461) #22 Them4 (ENSNGAG00000012370) #23 Them5 (ENSNGAG00000013042) #25 C2cd4d (ENSNGAG00000013377) #26 Rorc (ENSNGAG00000016436) #27 Lingo4 (ENSNGAG00000016843) #28 Tdrkh (ENSNGAG00000017825) #29 Oaz3 (ENSNGAG00000019961) #30 Mrpl9 (ENSNGAG00000010578) #31 Riiad1 (ENSNGAG00000017842) #33 Celf3 (ENSNGAG00000021612) #34 Snx27 (ENSNGAG00000013411) #35 Tuft1 (ENSNGAG00000016432) #36 ENSNGAG00000012043 #37 Pogz (ENSNGAG00000006487) Psmb4 (ENSNGAG00000014782) Lesser Egyptian jerboa MODERN SPECIES 141 Pglyrp4 (ENSJJAG00000009619) Pglyrp3 (ENSJJAG00000019546) ENSJJAG00000005907 ENSJJAG00000009222 ENSJJAG00000005176 ENSJJAG00000007620 ENSJJAG00000022880 ENSJJAG00000014882 Kprp (ENSJJAG00000004578) 2310050C09Rik (ENSJJAG00000016312) #10 ENSJJAG00000010637 ENSJJAG00000023669 ENSJJAG00000003622 ENSJJAG00000017745 #12 S100a11 (ENSJJAG00000016706) #21 S100a10 (ENSJJAG00000015567) #22 Them4 (ENSJJAG00000010836) #23 Rorc (ENSJJAG00000009867) #27 Lingo4 (ENSJJAG00000017052) #28 Tdrkh (ENSJJAG00000000323) #29 Oaz3 (ENSJJAG00000006341) #30 Mrpl9 (ENSJJAG00000018784) #31 Riiad1 (ENSJJAG00000021268) #33 Celf3 (ENSJJAG00000020104) #34 Snx27 (ENSJJAG00000023845) #35 Tuft1 (ENSJJAG00000011616) #36 ENSJJAG00000003080 Pogz (ENSJJAG00000009420) Psmb4 (ENSJJAG00000012721) ENSJJAG00000006656 ENSJJAG00000023680 Kangaroo rat DUPLICATION Kangaroo rat DUPLICATION Kangaroo rat MODERN SPECIES 345 ENSDORG00000028790 ENSDORG00000027976 ENSDORG00000026601 ENSDORG00000029886 ENSDORG00000029857 ENSDORG00000024714 ENSDORG00000025777 ENSDORG00000011451 Kprp (ENSDORG00000026948) ENSDORG00000023568 ENSDORG00000026274 ENSDORG00000003644 ENSDORG00000025569 Crnn (ENSDORG00000002349) #12 S100a11 (ENSDORG00000027002) #21 ENSDORG00000026060 #22 Them4 (ENSDORG00000015331) #23 Them5 (ENSDORG00000015328) #25 Rorc (ENSDORG00000015326) #27 Lingo4 (ENSDORG00000027587) #28 Tdrkh (ENSDORG00000015322) #29 Oaz3 (ENSDORG00000015321) #30 Mrpl9 (ENSDORG00000015320) #31 Celf3 (ENSDORG00000002488) #34 Snx27 (ENSDORG00000014172) #35 Tuft1 (ENSDORG00000026884) #36 ENSDORG00000007338 #37 Pogz (ENSDORG00000025298) Psmb4 (ENSDORG00000028831) ENSDORG00000015968 ENSDORG00000015967 Kangaroo rat MODERN SPECIES 337 Pla2g15 (ENSDORG00000010904) Esrp2 (ENSDORG00000000665) Nfatc3 (ENSDORG00000029167) Dus2 (ENSDORG00000001654) Ddx28 (ENSDORG00000028868) Slc12a4 (ENSDORG00000002837) Lcat (ENSDORG00000002836) Psmb10 (ENSDORG00000002832) Ctrl (ENSDORG00000025188) Pskh1 (ENSDORG00000010706) Nrn1l (ENSDORG00000010704) Edc4 (ENSDORG00000010702) ENSDORG00000027828 Thap11 (ENSDORG00000010701) Ranbp10 (ENSDORG00000010698) ENSDORG00000026702 #22 Gfod2 (ENSDORG00000000117) Enkd1 (ENSDORG00000000115) Pard6a (ENSDORG00000000114) Carmil2 (ENSDORG00000000112) Ctcf (ENSDORG00000000111) Ripor1 (ENSDORG00000014643) Agrp (ENSDORG00000013972) Atp6v0d1 (ENSDORG00000013966) Hsd11b2 (ENSDORG00000013965) Zdhhc1 (ENSDORG00000003276) Tppp3 (ENSDORG00000005871) Lrrc36 (ENSDORG00000005869) Kctd19 (ENSDORG00000005868) ENSDORG00000005865 Slc9a5 (ENSDORG00000005859) Kangaroo rat MODERN SPECIES 339 ENSDORG00000027569 Pum2 (ENSDORG00000011453) Sdc1 (ENSDORG00000014605) Laptm4a (ENSDORG00000014089) Matn3 (ENSDORG00000014087) Wdr35 (ENSDORG00000014086) Ttc32 (ENSDORG00000029568) Osr1 (ENSDORG00000000798) Nt5c1b (ENSDORG00000012516) Rdh14 (ENSDORG00000019712) Kcns3 (ENSDORG00000024097) Msgn1 (ENSDORG00000003509) Gen1 (ENSDORG00000010754) Smc6 (ENSDORG00000010753) Vsnl1 (ENSDORG00000024043) ENSDORG00000026713 #22 Cyria (ENSDORG00000010274) Mycn (ENSDORG00000009906) Ddx1 (ENSDORG00000012847) Nbas (ENSDORG00000012843) Lratd1 (ENSDORG00000023584) Trib2 (ENSDORG00000030161) Lpin1 (ENSDORG00000010485) Greb1 (ENSDORG00000009946) E2f6 (ENSDORG00000013213) Rock2 (ENSDORG00000008054) Pqlc3 (ENSDORG00000025612) ENSDORG00000027660 Kcnf1 (ENSDORG00000026132) Pdia6 (ENSDORG00000003594) Atp6v1c2 (ENSDORG00000003593) Rodentia_A ANCESTRAL SPECIES ENSGT01050000246051 ENSGT01020000230889 ENSGT00780000122937 ENSGT00730000111554 ENSGT00730000111580 #10 ENSGT00940000161842.b ENSGT00940000163498 ENSGT00940000163905 ENSGT00940000162465 #12 ENSGT00940000154467.b.b.b #13 ENSGT00940000170498 ENSGT00940000154467.b.a #15 ENSGT00940000154467.a #16 ENSGT00940000163983 #17 ENSGT00940000154172 #21 ENSGT00940000154197.b.b #22 ENSGT00940000160047 #23 ENSGT00940000161937 #25 ENSGT00940000163537 #26 ENSGT00940000161521 #27 ENSGT00940000162157 #28 ENSGT00940000159364 #29 ENSGT00940000161581 #30 ENSGT00390000008281 #31 ENSGT00390000003062 #33 ENSGT00940000154716 #34 ENSGT00950000183212.C #35 ENSGT00950000183065.B #36 ENSGT00940000154489.B ENSGT00940000162698 #37 ENSGT00940000160649 Sciuridae ANCESTRAL SPECIES ENSGT01020000230889 ENSGT00780000122937 ENSGT00730000111554 ENSGT00730000111580 #10 ENSGT00940000161842.b ENSGT00940000163498 ENSGT00940000163905 ENSGT00940000162465 #12 ENSGT00940000154467.b.b.b #13 ENSGT00940000170498.a ENSGT00940000154467.b.b.a #14 ENSGT00940000154467.b.a #15 ENSGT00940000154467.a #16 ENSGT00940000163983 #17 ENSGT00940000154172 #21 ENSGT00940000154197.b.b #22 ENSGT00940000160047 #23 ENSGT00940000161937 #25 ENSGT00940000163537 #26 ENSGT00940000161521 #27 ENSGT00940000162157 #28 ENSGT00940000159364 #29 ENSGT00940000161581 #30 ENSGT00390000008281 #31 ENSGT00390000003062 #33 ENSGT00940000154716 #34 ENSGT00950000183212.C #35 ENSGT00950000183065.B #36 ENSGT00940000154489.B ENSGT00940000162698 #37 ENSGT00940000160649 Eurasian red squirrel MODERN SPECIES ENSSVLG00005009341 ENSSVLG00005009331 ENSSVLG00005009194 ENSSVLG00005003674 ENSSVLG00005003667 CRNN (ENSSVLG00005003616) #12 ENSSVLG00005003594 #13 ENSSVLG00005003582 ENSSVLG00005003567 ENSSVLG00005003502 HRNR (ENSSVLG00005003432) #15 ENSSVLG00005003410 #16 ENSSVLG00005003377 #17 ENSSVLG00005003358 #21 ENSSVLG00005003347 #21 S100A10 (ENSSVLG00005003336) #22 THEM4 (ENSSVLG00005003315) #23 THEM5 (ENSSVLG00005003303) #25 C2CD4D (ENSSVLG00005003299) #26 RORC (ENSSVLG00005003240) #27 LINGO4 (ENSSVLG00005003205) #28 TDRKH (ENSSVLG00005003148) #29 OAZ3 (ENSSVLG00005003077) #30 ENSSVLG00005003027 #31 RIIAD1 (ENSSVLG00005002999) #33 CELF3 (ENSSVLG00005002946) #34 SNX27 (ENSSVLG00005002849) #35 TUFT1 (ENSSVLG00005002739) #36 CGN (ENSSVLG00005002674) POGZ (ENSSVLG00005002594) PSMB4 (ENSSVLG00005002561) Marmotini ANCESTRAL SPECIES 33 ENSGT00940000161986 ENSGT00940000161896 ENSGT00940000163629 ENSGT00910000144375 ENSGT00910000144329 ENSGT00940000162189 ENSGT00940000161606 ENSGT00940000162349 ENSGT00940000162657 ENSGT00940000163019.a ENSGT00940000162465 #12 ENSGT00940000154467.b.b.a #14 ENSGT00940000154467.b.a #15 ENSGT00940000154467.a #16 ENSGT00940000154172 #21 ENSGT00940000154197.b.b #22 ENSGT00940000160047 #23 ENSGT00940000161937 #25 ENSGT00940000163537 #26 ENSGT00940000161521 #27 ENSGT00940000162157 #28 ENSGT00940000159364 #29 ENSGT00940000161581 #30 ENSGT00390000008281 #31 ENSGT00390000003062 #33 ENSGT00940000154716 #34 ENSGT00950000183212.C #35 ENSGT00950000183065.B #36 ENSGT00940000162698 #37 ENSGT00940000160649 ENSGT00390000000698 Marmotini_b ANCESTRAL SPECIES 77 ENSGT00940000162465 #12 ENSGT00940000154467.b.b.a #14 ENSGT00940000154467.b.a #15 ENSGT00940000154172 #21 ENSGT00940000154197.b.b #22 ENSGT00940000160047 #23 ENSGT00940000161937 #25 ENSGT00940000163537 #26 ENSGT00940000161521 #27 ENSGT00940000162157 #28 ENSGT00940000159364 #29 ENSGT00940000161581 #30 ENSGT00390000008281 #31 ENSGT00390000003062 #33 ENSGT00940000154716 #34 ENSGT00950000183212.C #35 ENSGT00950000183065.B #36 ENSGT00940000162698 #37 ENSGT00940000160649 ENSGT00390000000698 Squirrel MODERN SPECIES 180 PGLYRP3 (ENSSTOG00000005008) ENSSTOG00000008523 ENSSTOG00000006819 ENSSTOG00000032058 ENSSTOG00000022826 ENSSTOG00000000156 ENSSTOG00000030434 ENSSTOG00000033823 KPRP (ENSSTOG00000000154) C1orf68 (ENSSTOG00000033510) #10 LCE5A (ENSSTOG00000023067) ENSSTOG00000029937 ENSSTOG00000019712 ENSSTOG00000034972 ENSSTOG00000033111 S100A10 (ENSSTOG00000023215) #22 THEM4 (ENSSTOG00000010762) #23 THEM5 (ENSSTOG00000010754) #25 RORC (ENSSTOG00000019386) #27 LINGO4 (ENSSTOG00000015241) #28 TDRKH (ENSSTOG00000006506) #29 OAZ3 (ENSSTOG00000031407) #30 RIIAD1 (ENSSTOG00000034652) #33 CELF3 (ENSSTOG00000022934) #34 SNX27 (ENSSTOG00000005289) #35 TUFT1 (ENSSTOG00000003909) #36 ENSSTOG00000003867 #37 POGZ (ENSSTOG00000012056) PSMB4 (ENSSTOG00000012054) SELENBP1 (ENSSTOG00000027196) RFX5 (ENSSTOG00000013246) Alpin marmot MODERN SPECIES 85 ENSMMMG00000018192 ENSMMMG00000018196 ENSMMMG00000018197 LCE7A (ENSMMMG00000018216) C1orf68 (ENSMMMG00000018221) #10 ENSMMMG00000018223 ENSMMMG00000018241 LCE5A (ENSMMMG00000018245) ENSMMMG00000018247 ENSMMMG00000018264 #13 ENSMMMG00000018274 ENSMMMG00000018282 #15 ENSMMMG00000018292 #15 RPTN (ENSMMMG00000018298) #16 S100A11 (ENSMMMG00000018305) #21 S100A10 (ENSMMMG00000018313) #22 THEM4 (ENSMMMG00000018374) #23 THEM5 (ENSMMMG00000018379) #25 RORC (ENSMMMG00000018387) #27 LINGO4 (ENSMMMG00000018432) #28 TDRKH (ENSMMMG00000018437) #29 OAZ3 (ENSMMMG00000018483) #30 ENSMMMG00000018501 #31 CELF3 (ENSMMMG00000018558) #34 SNX27 (ENSMMMG00000018570) #35 TUFT1 (ENSMMMG00000018579) #36 ENSMMMG00000018638 POGZ (ENSMMMG00000018654) PSMB4 (ENSMMMG00000018764) SELENBP1 (ENSMMMG00000018768) RFX5 (ENSMMMG00000018801) Hystricomorpha ANCESTRAL SPECIES ENSGT00940000154197.b.b #22 Naked mole-rat female DUPLICATION Naked mole-rat female MODERN SPECIES 22 WDR75 (ENSHGLG00000011577) SLC40A1 (ENSHGLG00000008999) ASDURF (ENSHGLG00000029891) ENSHGLG00000032663 ENSHGLG00000039700 ENSHGLG00000040561 FLACC1 (ENSHGLG00000007412) ENSHGLG00000037940 ENSHGLG00000004915 ENSHGLG00000004703 ENSHGLG00000034754 ENSHGLG00000003940 ENSHGLG00000002790 ENSHGLG00000042696 ENSHGLG00000008965 ENSHGLG00000040344 #22 ENSHGLG00000049153 ANKRD44 (ENSHGLG00000008625) ENSHGLG00000008285 ENSHGLG00000038699 HSPD1 (ENSHGLG00000007927) ENSHGLG00000042669 MOB4 (ENSHGLG00000050196) RFTN2 (ENSHGLG00000017636) MARS2 (ENSHGLG00000049320) BOLL (ENSHGLG00000017562) PLCL1 (ENSHGLG00000015970) ENSHGLG00000043283 SATB2 (ENSHGLG00000015892) ENSHGLG00000020697 C2orf69 (ENSHGLG00000040936) Naked mole-rat female DUPLICATION Naked mole-rat female MODERN SPECIES 19 LMAN1L (ENSHGLG00000000444) ULK3 (ENSHGLG00000000809) SCAMP2 (ENSHGLG00000001630) MPI (ENSHGLG00000000351) FAM219B (ENSHGLG00000048731) COX5A (ENSHGLG00000047174) ENSHGLG00000047540 RPP25 (ENSHGLG00000039962) SCAMP5 (ENSHGLG00000002763) PPCDC (ENSHGLG00000004861) C15orf39 (ENSHGLG00000033459) COMMD4 (ENSHGLG00000002044) NEIL1 (ENSHGLG00000043720) MAN2C1 (ENSHGLG00000000690) SIN3A (ENSHGLG00000015595) ENSHGLG00000042955 #22 PTPN9 (ENSHGLG00000001900) ENSHGLG00000036416 IMP3 (ENSHGLG00000047594) SNX33 (ENSHGLG00000032746) CSPG4 (ENSHGLG00000000788) ENSHGLG00000002838 ENSHGLG00000001339 HMG20A (ENSHGLG00000000560) PEAK1 (ENSHGLG00000001872) ENSHGLG00000020096 TSPAN3 (ENSHGLG00000048829) PSTPIP1 (ENSHGLG00000002685) RCN2 (ENSHGLG00000040045) SCAPER (ENSHGLG00000001955) ISL2 (ENSHGLG00000001431) Naked mole-rat female MODERN SPECIES 23 CLEC4F (ENSHGLG00000015223) CD207 (ENSHGLG00000017278) VAX2 (ENSHGLG00000038768) ATP6V1B1 (ENSHGLG00000034993) ANKRD53 (ENSHGLG00000015981) TEX261 (ENSHGLG00000047338) ENSHGLG00000015917 ENSHGLG00000039175 ENSHGLG00000050708 ZNF638 (ENSHGLG00000015789) DYSF (ENSHGLG00000007256) ENSHGLG00000043383 CYP26B1 (ENSHGLG00000016604) EXOC6B (ENSHGLG00000011639) ENSHGLG00000039406 ENSHGLG00000032593 #22 ENSHGLG00000040821 ENSHGLG00000006121 SPR (ENSHGLG00000041182) EMX1 (ENSHGLG00000036309) SFXN5 (ENSHGLG00000007851) RAB11FIP5 (ENSHGLG00000016021) SMYD5 (ENSHGLG00000015439) PRADC1 (ENSHGLG00000015353) CCT7 (ENSHGLG00000011761) FBXO41 (ENSHGLG00000010102) EGR4 (ENSHGLG00000009021) ENSHGLG00000039055 ENSHGLG00000044724 DUSP11 (ENSHGLG00000012958) ENSHGLG00000012325 Naked mole-rat female DUPLICATION Naked mole-rat female DUPLICATION Naked mole-rat female DUPLICATION Naked mole-rat female DUPLICATION Naked mole-rat female MODERN SPECIES 22 ENSHGLG00000000458 LRAT (ENSHGLG00000045268) ENSHGLG00000032409 ENSHGLG00000002344 ENSHGLG00000038593 ENSHGLG00000001875 ENSHGLG00000049616 ENSHGLG00000000870 ENSHGLG00000042451 ENSHGLG00000049550 ENSHGLG00000019770 ENSHGLG00000001548 ENSHGLG00000047631 IL15 (ENSHGLG00000038275) ENSHGLG00000007865 ENSHGLG00000042945 #22 ZNF330 (ENSHGLG00000000725) ENSHGLG00000048416 RNF150 (ENSHGLG00000000594) ENSHGLG00000049997 ENSHGLG00000001009 ENSHGLG00000044620 ENSHGLG00000048262 ENSHGLG00000000200 ENSHGLG00000000179 ENSHGLG00000000166 ELMOD2 (ENSHGLG00000043621) CLGN (ENSHGLG00000000153) SCOC (ENSHGLG00000035798) MAML3 (ENSHGLG00000039990) MGST2 (ENSHGLG00000040336) Naked mole-rat female MODERN SPECIES 26 WDTC1 (ENSHGLG00000013846) ENSHGLG00000044722 SLC9A1 (ENSHGLG00000036829) ENSHGLG00000047714 TENT5B (ENSHGLG00000034048) TRNP1 (ENSHGLG00000041801) KDF1 (ENSHGLG00000012217) NUDC (ENSHGLG00000011404) NR0B2 (ENSHGLG00000032117) GPATCH3 (ENSHGLG00000012492) GPN2 (ENSHGLG00000012257) SFN (ENSHGLG00000033145) ZDHHC18 (ENSHGLG00000018702) PIGV (ENSHGLG00000019195) ARID1A (ENSHGLG00000010530) ENSHGLG00000033713 #22 RPS6KA1 (ENSHGLG00000013826) ENSHGLG00000043190 DHDDS (ENSHGLG00000015297) ENSHGLG00000050208 #32 ENSHGLG00000043841 CRYBG2 (ENSHGLG00000014835) ENSHGLG00000042566 UBXN11 (ENSHGLG00000014636) SH3BGRL3 (ENSHGLG00000014565) CEP85 (ENSHGLG00000012227) CNKSR1 (ENSHGLG00000012930) ENSHGLG00000012204 ZNF593 (ENSHGLG00000011938) C1orf232 (ENSHGLG00000013042) FAM110D (ENSHGLG00000011546) Naked mole-rat female MODERN SPECIES 26 CASP9 (ENSHGLG00000019310) ENSHGLG00000016895 CTRC (ENSHGLG00000018486) EFHD2 (ENSHGLG00000046486) FHAD1 (ENSHGLG00000018196) TMEM51 (ENSHGLG00000013366) ENSHGLG00000009940 ENSHGLG00000035804 CPT2 (ENSHGLG00000003070) ENSHGLG00000002034 ENSHGLG00000001648 LRP8 (ENSHGLG00000001818) ENSHGLG00000041952 NDC1 (ENSHGLG00000001547) ENSHGLG00000046232 ENSHGLG00000042903 #22 ENSHGLG00000040583 ENSHGLG00000001352 LRRC42 (ENSHGLG00000000742) ENSHGLG00000043225 TCEANC2 (ENSHGLG00000046573) ENSHGLG00000007958 CYB5RL (ENSHGLG00000001600) MRPL37 (ENSHGLG00000001515) SSBP3 (ENSHGLG00000000619) ACOT11 (ENSHGLG00000001977) FAM151A (ENSHGLG00000038314) ENSHGLG00000046321 ENSHGLG00000005631 PIK3CD (ENSHGLG00000005279) CLSTN1 (ENSHGLG00000004884) Naked mole-rat female MODERN SPECIES 10 ENSHGLG00000032534 TBX15 (ENSHGLG00000050081) ENSHGLG00000038215 ENSHGLG00000042619 HSD3B1 (ENSHGLG00000033840) ENSHGLG00000006464 ENSHGLG00000042386 ENSHGLG00000049042 ENSHGLG00000015205 ENSHGLG00000016365 ENSHGLG00000004729 ENSHGLG00000001174 ENSHGLG00000033772 ENSHGLG00000005182 ENSHGLG00000039288 ENSHGLG00000037846 #22 ENSHGLG00000038214 CHD1L (ENSHGLG00000008933) ENSHGLG00000018478 ENSHGLG00000048596 ENSHGLG00000034080 BCL9 (ENSHGLG00000013904) ENSHGLG00000004803 ENSHGLG00000043134 GJA5 (ENSHGLG00000037183) ENSHGLG00000006450 GJA8 (ENSHGLG00000020482) ENSHGLG00000008167 ENSHGLG00000009553 ENSHGLG00000049549 ENSHGLG00000041766 Naked mole-rat female DUPLICATION Naked mole-rat female MODERN SPECIES 31 F8 (ENSHGLG00000034300) ENSHGLG00000000581 MPP1 (ENSHGLG00000000629) DKC1 (ENSHGLG00000000649) ENSHGLG00000000701 ENSHGLG00000049532 ENSHGLG00000046464 ENSHGLG00000049566 ENSHGLG00000047737 ENSHGLG00000002010 ENSHGLG00000035389 ENSHGLG00000043323 IDS (ENSHGLG00000049970) AFF2 (ENSHGLG00000000634) ENSHGLG00000028863 ENSHGLG00000019716 #22 FMR1 (ENSHGLG00000000576) ENSHGLG00000040472 #22 ENSHGLG00000045634 SLITRK2 (ENSHGLG00000007935) ENSHGLG00000035566 ENSHGLG00000032750 ENSHGLG00000038876 ENSHGLG00000049672 ENSHGLG00000036529 ENSHGLG00000037583 ENSHGLG00000004407 ENSHGLG00000039059 SOX3 (ENSHGLG00000039208) ENSHGLG00000047068 ATP11C (ENSHGLG00000007759) Naked mole-rat female MODERN SPECIES 31 MCF2 (ENSHGLG00000013161) ENSHGLG00000009095 ATP11C (ENSHGLG00000007759) ENSHGLG00000047068 SOX3 (ENSHGLG00000039208) ENSHGLG00000039059 ENSHGLG00000004407 ENSHGLG00000037583 ENSHGLG00000036529 ENSHGLG00000049672 ENSHGLG00000038876 ENSHGLG00000032750 ENSHGLG00000035566 SLITRK2 (ENSHGLG00000007935) ENSHGLG00000045634 ENSHGLG00000040472 #22 FMR1 (ENSHGLG00000000576) ENSHGLG00000019716 #22 ENSHGLG00000028863 AFF2 (ENSHGLG00000000634) IDS (ENSHGLG00000049970) ENSHGLG00000043323 ENSHGLG00000035389 ENSHGLG00000002010 ENSHGLG00000047737 ENSHGLG00000049566 ENSHGLG00000046464 ENSHGLG00000049532 ENSHGLG00000000701 DKC1 (ENSHGLG00000000649) MPP1 (ENSHGLG00000000629) Naked mole-rat female MODERN SPECIES 31 ENSHGLG00000032329 ENSHGLG00000045854 FOXO4 (ENSHGLG00000013305) ENSHGLG00000004894 ENSHGLG00000010744 MED12 (ENSHGLG00000005421) NLGN3 (ENSHGLG00000009982) GJB1 (ENSHGLG00000004743) ZMYM3 (ENSHGLG00000014526) NONO (ENSHGLG00000005550) ITGB1BP2 (ENSHGLG00000015433) ENSHGLG00000050039 ENSHGLG00000050796 ENSHGLG00000014818 ENSHGLG00000031947 ENSHGLG00000049149 #22 ENSHGLG00000040608 ENSHGLG00000007209 ENSHGLG00000042327 ENSHGLG00000050614 ENSHGLG00000008499 ENSHGLG00000034062 ENSHGLG00000006799 ENSHGLG00000037492 ENSHGLG00000050364 ENSHGLG00000047657 RTL5 (ENSHGLG00000043760) NHSL2 (ENSHGLG00000004791) ENSHGLG00000033358 PIN4 (ENSHGLG00000043461) ERCC6L (ENSHGLG00000016594) Boreoeutheria DUPLICATION Boreoeutheria ANCESTRAL SPECIES ENSGT00940000154197.b.a.a ##22 Euarchontoglires ANCESTRAL SPECIES ENSGT00940000154197.b.a.a ##22 Euarchontoglires_A ANCESTRAL SPECIES ENSGT00940000154197.b.a.a ##22 Glires ANCESTRAL SPECIES ENSGT00940000154197.b.a.a ##22 Rodentia ANCESTRAL SPECIES ENSGT00940000154197.b.a.a ##22 Rodentia_A ANCESTRAL SPECIES ENSGT00940000154197.b.a.a ##22 Hystricomorpha ANCESTRAL SPECIES ENSGT00940000154197.b.a.a ##22 Naked mole-rat female MODERN SPECIES 31 MID1IP1 (ENSHGLG00000047790) ENSHGLG00000005272 BCOR (ENSHGLG00000004759) ENSHGLG00000044824 ATP6AP2 (ENSHGLG00000009344) MPC1L (ENSHGLG00000020388) CXorf38 (ENSHGLG00000005921) MED14 (ENSHGLG00000005145) USP9X (ENSHGLG00000005613) Ddx3x (ENSHGLG00000004805) ENSHGLG00000034784 NYX (ENSHGLG00000004422) ENSHGLG00000016669 ENSHGLG00000037147 CASK (ENSHGLG00000008006) ENSHGLG00000047643 ##22 GPR34 (ENSHGLG00000041208) GPR82 (ENSHGLG00000018778) ENSHGLG00000012354 ENSHGLG00000048297 ENSHGLG00000039815 ENSHGLG00000048133 MAOB (ENSHGLG00000018385) ENSHGLG00000018403 NDP (ENSHGLG00000008619) ENSHGLG00000039999 ENSHGLG00000004037 ENSHGLG00000044457 ENSHGLG00000047295 ENSHGLG00000004981 KDM6A (ENSHGLG00000005358) Laurasiatheria ANCESTRAL SPECIES ENSGT00940000154197.b.a.a ##22 Laurasiatheria_a ANCESTRAL SPECIES ENSGT00940000154197.b.a.a ##22 Artiodactyla ANCESTRAL SPECIES ENSGT00940000154197.b.a.a ##22 Artiodactyla_a ANCESTRAL SPECIES ENSGT00940000154197.b.a.a ##22 Artiodactyla_b ANCESTRAL SPECIES ENSGT00940000154197.b.a.a ##22 Cetacea ANCESTRAL SPECIES 29 ENSGT00940000163248 ENSGT00730000111626 ENSGT00940000164168 ENSGT00940000154467.b.a #15 ENSGT00940000154172.ab.a.b.a.a #21 ENSGT00940000154197.b.a.a ##22 Blue whale MODERN SPECIES ENSBMSG00010019114 ENSBMSG00010019095 S100A8 (ENSBMSG00010019080) ENSBMSG00010019057 ENSBMSG00010019042 ENSBMSG00010019014 ENSBMSG00010018964 ENSBMSG00010018953 ENSBMSG00010018930 SPRR4 (ENSBMSG00010018919) ENSBMSG00010018889 ENSBMSG00010018868 CRCT1 (ENSBMSG00010018835) #11 ENSBMSG00010018815 #15 ENSBMSG00010018799 #21 S100A10 (ENSBMSG00010018778) ##22 THEM4 (ENSBMSG00010018743) #23 THEM5 (ENSBMSG00010018706) #25 C2CD4D (ENSBMSG00010018697) #26 RORC (ENSBMSG00010018612) #27 LINGO4 (ENSBMSG00010018591) #28 TDRKH (ENSBMSG00010018475) #29 ENSBMSG00010018451 OAZ3 (ENSBMSG00010018287) #30 MRPL9 (ENSBMSG00010018243) #31 RIIAD1 (ENSBMSG00010018208) #33 CELF3 (ENSBMSG00010018090) #34 SNX27 (ENSBMSG00010017840) #35 TUFT1 (ENSBMSG00010017718) #36 CGN (ENSBMSG00010017607) POGZ (ENSBMSG00010017219) Boreoeutheria ANCESTRAL SPECIES ENSGT00940000154197.b.a.b ##22 Euarchontoglires ANCESTRAL SPECIES ENSGT00940000154197.b.a.b ##22 Euarchontoglires_A ANCESTRAL SPECIES ENSGT00940000154197.b.a.b ##22 Glires ANCESTRAL SPECIES ENSGT00940000154197.b.a.b ##22 Rodentia ANCESTRAL SPECIES ENSGT00940000154197.b.a.b ##22 Rodentia_A ANCESTRAL SPECIES ENSGT00940000154197.b.a.b ##22 Hystricomorpha ANCESTRAL SPECIES ENSGT00940000154197.b.a.b ##22 Naked mole-rat female MODERN SPECIES 10 PSMB4 (ENSHGLG00000011939) POGZ (ENSHGLG00000008750) ENSHGLG00000011542 #37 TUFT1 (ENSHGLG00000014891) #36 SNX27 (ENSHGLG00000004841) #35 ENSHGLG00000006045 #34 ENSHGLG00000041725 #34 RIIAD1 (ENSHGLG00000009105) #33 MRPL9 (ENSHGLG00000044925) #31 OAZ3 (ENSHGLG00000048260) #30 TDRKH (ENSHGLG00000007478) #29 LINGO4 (ENSHGLG00000044939) #28 RORC (ENSHGLG00000012884) #27 ENSHGLG00000011973 #25 ENSHGLG00000013312 #21 ENSHGLG00000040771 ##22 ENSHGLG00000015316 #23 ENSHGLG00000034971 #18 ENSHGLG00000045102 ENSHGLG00000037105 #17 ENSHGLG00000015383 #16 ENSHGLG00000042729 #15 ENSHGLG00000040052 ENSHGLG00000035954 ENSHGLG00000048818 #13 ENSHGLG00000038619 #12 ENSHGLG00000042654 ENSHGLG00000041296 ENSHGLG00000045394 ENSHGLG00000050625 ENSHGLG00000041831 Atlantogenata ANCESTRAL SPECIES ENSGT00940000154197.b #22 Afrotheria ANCESTRAL SPECIES ENSGT00940000154197.b #22 Afrotheria_a ANCESTRAL SPECIES ENSGT00940000154197.b #22 Hyrax MODERN SPECIES 10200 S100A10 (ENSPCAG00000004231) #22 Xenarthra ANCESTRAL SPECIES ENSGT00940000154197.b #22 Sloth DUPLICATION Sloth DUPLICATION Sloth DUPLICATION Sloth MODERN SPECIES 10678 ENSCHOG00000003222 #22 Sloth MODERN SPECIES 11438 ENSCHOG00000003506 #22 Sloth MODERN SPECIES 9432 ENSCHOG00000010099 #22 Sloth MODERN SPECIES 9214 ENSCHOG00000002195 #22 Eutheria DUPLICATION Eutheria ANCESTRAL SPECIES ENSGT00940000154197.a.a ##22 Atlantogenata ANCESTRAL SPECIES 66 ENSGT00730000111554 ENSGT00940000163498 ENSGT00940000162465 #12 ENSGT00940000154467.b.b.b #13 ENSGT00940000154467.b.b.a #14 ENSGT00940000154467.a #16 ENSGT00940000163983 #17 ENSGT00940000162966 #18 ENSGT00940000154172 #21 ENSGT00940000154197.a.a ##22 ENSGT00940000160047 #23 ENSGT00940000161937 #25 ENSGT00940000163537 #26 ENSGT00940000161521 #27 ENSGT00940000162157 #28 ENSGT00940000159364 #29 ENSGT00940000161581 #30 ENSGT00390000008281 #31 ENSGT00390000003062 #33 ENSGT00940000154716 #34 ENSGT00950000183212.C #35 ENSGT00950000183065.B #36 ENSGT00940000162698 #37 ENSGT00940000160649 ENSGT00390000000698 Xenarthra ANCESTRAL SPECIES 1096 ENSGT00940000163983 #17 ENSGT00940000162966 #18 ENSGT00940000154172 #21 ENSGT00940000154197.a.a ##22 ENSGT00940000160047 #23 Armadillo DUPLICATION Armadillo MODERN SPECIES 3693 DTWD2 (ENSDNOG00000041906) DMXL1 (ENSDNOG00000009981) TNFAIP8 (ENSDNOG00000019681) ENSDNOG00000042795 HSD17B4 (ENSDNOG00000019682) FAM170A (ENSDNOG00000010004) ENSDNOG00000037586 PRR16 (ENSDNOG00000048604) ENSDNOG00000031505 FTMT (ENSDNOG00000047195) SRFBP1 (ENSDNOG00000017733) ENSDNOG00000034491 LOX (ENSDNOG00000031089) ENSDNOG00000009013 SNCAIP (ENSDNOG00000002675) ENSDNOG00000049002 ##22 ENSDNOG00000012846 Armadillo DUPLICATION Armadillo DUPLICATION Armadillo MODERN SPECIES 2990 ENSDNOG00000031297 ENSDNOG00000044093 #17 ENSDNOG00000015095 #18 ENSDNOG00000039553 S100A11 (ENSDNOG00000045817) #21 ENSDNOG00000011425 ##22 ENSDNOG00000005970 #23 Armadillo MODERN SPECIES 870 RGS6 (ENSDNOG00000016888) SIPA1L1 (ENSDNOG00000003108) PCNX1 (ENSDNOG00000006114) ENSDNOG00000000919 MAP3K9 (ENSDNOG00000013970) ENSDNOG00000033297 TTC9 (ENSDNOG00000048614) ENSDNOG00000048504 ##22 Armadillo MODERN SPECIES 881 CXCL12 (ENSDNOG00000017395) ZNF32 (ENSDNOG00000035046) ENSDNOG00000032445 ENSDNOG00000031783 ZNF239 (ENSDNOG00000004406) ENSDNOG00000037715 ENSDNOG00000030849 ENSDNOG00000017385 RASGEF1A (ENSDNOG00000019776) CSGALNACT2 (ENSDNOG00000005042) RET (ENSDNOG00000019676) ENSDNOG00000037175 ENSDNOG00000045660 ENSDNOG00000047852 ##22 Afrotheria ANCESTRAL SPECIES 76 ENSGT00940000163498 ENSGT00940000162465 #12 ENSGT00940000154467.b.b.b #13 ENSGT00940000154467.b.b.a #14 ENSGT00940000154467.a #16 ENSGT00940000163983 #17 ENSGT00940000162966 #18 ENSGT00940000154172 #21 ENSGT00940000154197.a.a ##22 ENSGT00940000160047 #23 ENSGT00940000161937 #25 ENSGT00940000161521 #27 ENSGT00940000162157 #28 ENSGT00940000159364 #29 ENSGT00940000161581 #30 ENSGT00390000008281 #31 ENSGT00390000003062 #33 ENSGT00940000154716 #34 ENSGT00950000183212.C #35 ENSGT00950000183065.B #36 ENSGT00940000162698 #37 ENSGT00940000160649 ENSGT00390000000698 ENSGT00390000014244 Afrotheria_a ANCESTRAL SPECIES 75 ENSGT00940000163498 ENSGT00940000162465 #12 ENSGT00940000154467.b.b.b #13 ENSGT00940000154467.b.b.a #14 ENSGT00940000154467.a #16 ENSGT00940000163983 #17 ENSGT00940000162966 #18 ENSGT00940000154172 #21 ENSGT00940000154197.a.a ##22 ENSGT00940000160047 #23 ENSGT00940000161937 #25 ENSGT00940000161521 #27 ENSGT00940000162157 #28 ENSGT00940000159364 #29 ENSGT00940000161581 #30 ENSGT00390000008281 #31 ENSGT00390000003062 #33 ENSGT00940000154716 #34 ENSGT00950000183212.C #35 ENSGT00950000183065.B #36 ENSGT00940000162698 #37 ENSGT00940000160649 ENSGT00390000000698 ENSGT00390000014244 Elephant MODERN SPECIES 26 MZT1 (ENSLAFG00000011001) DACH1 (ENSLAFG00000002947) KLHL1 (ENSLAFG00000011623) ENSLAFG00000028368 ENSLAFG00000027220 ENSLAFG00000026382 ENSLAFG00000013745 ENSLAFG00000010326 CRNN (ENSLAFG00000011853) #12 ENSLAFG00000023048 #13 ENSLAFG00000031062 #14 RPTN (ENSLAFG00000032727) #16 ENSLAFG00000027202 #17 ENSLAFG00000011588 #18 S100A11 (ENSLAFG00000026763) #21 ENSLAFG00000011183 ##22 THEM4 (ENSLAFG00000028908) #23 THEM5 (ENSLAFG00000020836) #25 RORC (ENSLAFG00000020960) #27 LINGO4 (ENSLAFG00000006279) #28 TDRKH (ENSLAFG00000006274) #29 OAZ3 (ENSLAFG00000006273) #30 ENSLAFG00000006271 #31 RIIAD1 (ENSLAFG00000027191) #33 CELF3 (ENSLAFG00000030147) #34 SNX27 (ENSLAFG00000013322) #35 TUFT1 (ENSLAFG00000011926) #36 ENSLAFG00000011923 #37 POGZ (ENSLAFG00000011913) ENSLAFG00000029025 PSMB4 (ENSLAFG00000014124) Tenrec MODERN SPECIES 12209 S100A10 (ENSETEG00000007699) ##22 Boreoeutheria ANCESTRAL SPECIES ENSGT00940000154197.a.a ##22 Laurasiatheria ANCESTRAL SPECIES ENSGT00940000154197.a.a ##22 Laurasiatheria_a ANCESTRAL SPECIES ENSGT00940000154197.a.a ##22 Artiodactyla ANCESTRAL SPECIES ENSGT00940000154197.a.a ##22 Artiodactyla_a ANCESTRAL SPECIES ENSGT00940000154197.a.a ##22 Artiodactyla_b ANCESTRAL SPECIES ENSGT00940000154197.a.a ##22 Pecora ANCESTRAL SPECIES ENSGT00940000154197.a.a ##22 Percora_a ANCESTRAL SPECIES 1 ENSGT00730000111580 #10 ENSGT00940000165404 ENSGT00940000163905 ENSGT00940000163498 ENSGT00940000162465 #12 ENSGT00940000154467.b.b.b #13 ENSGT00940000154467.a.h.b ##13 ENSGT00940000154467.a.h.a ##13 ENSGT00940000154467.b.a #15 ENSGT00940000154467.a.i.a.a #16 ENSGT00940000154467.b.b.a #14 ENSGT00940000154467.a.i.b #16 ENSGT00940000163983 #17 ENSGT00940000162966 #18 ENSGT00940000154172.z #21 ENSGT00940000154197.a.a ##22 ENSGT00940000154197.b.b #22 ENSGT00940000160047 #23 ENSGT00940000161937 #25 ENSGT00940000163537 #26 ENSGT00940000161521 #27 ENSGT00940000162157 #28 ENSGT00940000159364 #29 ENSGT00940000161581 #30 ENSGT00390000008281 #31 ENSGT00390000003062 #33 ENSGT00940000154716 #34 ENSGT00950000183212.C #35 ENSGT00950000182891.a.a.b.a.a.a.b.a.b ENSGT00950000183065.B #36 ENSGT00940000162698 #37 Siberian musk deer MODERN SPECIES 247 ENSMMSG00000016213 #15 ENSMMSG00000016239 #16 ENSMMSG00000016303 #17 TCHHL1 (ENSMMSG00000016323) #18 S100A11 (ENSMMSG00000016349) #21 ENSMMSG00000016372 ##22 THEM4 (ENSMMSG00000016402) #23 THEM5 (ENSMMSG00000016442) #25 C2CD4D (ENSMMSG00000016475) #26 RORC (ENSMMSG00000016501) #27 LINGO4 (ENSMMSG00000016563) #28 TDRKH (ENSMMSG00000016586) #29 OAZ3 (ENSMMSG00000016664) #30 MRPL9 (ENSMMSG00000016852) #31 RIIAD1 (ENSMMSG00000016900) #33 CELF3 (ENSMMSG00000016967) #34 SNX27 (ENSMMSG00000017082) #35 ENSMMSG00000017218 TUFT1 (ENSMMSG00000017243) #36 ENSMMSG00000017355 #37 POGZ (ENSMMSG00000017404) Laurasiatheria_b ANCESTRAL SPECIES ENSGT00940000154197.a.a ##22 Carnivora ANCESTRAL SPECIES ENSGT00940000154197.a.a ##22 Caniformia ANCESTRAL SPECIES ENSGT00940000154197.a.a ##22 Caniformia_b ANCESTRAL SPECIES ENSGT00940000154197.a.a ##22 Mustelinae ANCESTRAL SPECIES ENSGT00940000154197.a.a ##22 Ferret MODERN SPECIES 190 CHRM5 (ENSMPUG00000019837) ENSMPUG00000008042 RYR3 (ENSMPUG00000008052) ENSMPUG00000008108 FMN1 (ENSMPUG00000008124) GREM1 (ENSMPUG00000019838) SCG5 (ENSMPUG00000008142) ENSMPUG00000008148 GJD2 (ENSMPUG00000008157) ACTC1 (ENSMPUG00000008160) AQR (ENSMPUG00000008166) ZNF770 (ENSMPUG00000019839) DPH6 (ENSMPUG00000008181) CDIN1 (ENSMPUG00000008191) MEIS2 (ENSMPUG00000008204) ENSMPUG00000019840 ##22 ENSMPUG00000019841 TMCO5A (ENSMPUG00000008215) SPRED1 (ENSMPUG00000008255) FAM98B (ENSMPUG00000008259) ENSMPUG00000008268 ENSMPUG00000008279 THBS1 (ENSMPUG00000008282) GPR176 (ENSMPUG00000008294) EIF2AK4 (ENSMPUG00000008299) ENSMPUG00000008324 BMF (ENSMPUG00000008355) BUB1B (ENSMPUG00000008380) PAK6 (ENSMPUG00000008398) PLCB2 (ENSMPUG00000008404) CCDC9B (ENSMPUG00000008420) Euarchontoglires ANCESTRAL SPECIES ENSGT00940000154197.a.a ##22 Euarchontoglires_A ANCESTRAL SPECIES ENSGT00940000154197.a.a ##22 Glires ANCESTRAL SPECIES ENSGT00940000154197.a.a ##22 Lagomorpha ANCESTRAL SPECIES ENSGT00940000154197.a.a ##22 Pika MODERN SPECIES 5811 ENSOPRG00000005769 ##22 Rodentia ANCESTRAL SPECIES ENSGT00940000154197.a.a ##22 Rodentia_A ANCESTRAL SPECIES ENSGT00940000154197.a.a ##22 Hystricomorpha DUPLICATION Hystricomorpha DUPLICATION Hystricomorpha ANCESTRAL SPECIES 131 ENSGT00940000154172 #21 ENSGT00940000154197.a.a.c.a ##22 Hystricomorpha_a ANCESTRAL SPECIES 59 ENSGT00940000162349 ENSGT00940000162657 ENSGT00700000104637 ENSGT00730000111592 ENSGT00940000163248.h.a ENSGT00940000165746 ENSGT00730000111554 ENSGT00940000161842.a ENSGT00940000169512 ENSGT00730000111580 #10 ENSGT00940000161842.b ENSGT00940000163498 ENSGT00940000162465 #12 ENSGT00940000154467.a #16 ENSGT00940000154172 #21 ENSGT00940000154197.a.a.c.a ##22 ENSGT00940000154197.a.a.d ##22 ENSGT00940000160047 #23 ENSGT00940000161937 #25 ENSGT00940000163537 #26 ENSGT00940000161521 #27 ENSGT00940000162157 #28 ENSGT00940000159364 #29 ENSGT00940000161581 #30 ENSGT00390000008281 #31 ENSGT00390000003062 #33 ENSGT00940000154716 #34 ENSGT00950000183212.C #35 ENSGT00950000183065.B #36 ENSGT00940000154489.B ENSGT00940000160649 Hystricomorpha_b DUPLICATION Hystricomorpha_b ANCESTRAL SPECIES 79 ENSGT00940000162465 #12 ENSGT00940000154467.a #16 ENSGT00940000154172 #21 ENSGT00940000154197.a.a.c.a.b.b ##22 ENSGT00940000154197.a.a.c.a.a ##22 ENSGT00940000160047 #23 ENSGT00940000161937 #25 ENSGT00940000163537 #26 ENSGT00940000161521 #27 ENSGT00940000162157 #28 ENSGT00940000159364 #29 ENSGT00940000161581 #30 ENSGT00390000008281 #31 ENSGT00390000003062 #33 ENSGT00940000154716 #34 ENSGT00950000183212.C #35 ENSGT00950000183065.B #36 ENSGT00940000154489.B ENSGT00940000160649 ENSGT00390000000698 Degu DUPLICATION Degu DUPLICATION Degu DUPLICATION Degu DUPLICATION Degu MODERN SPECIES 230 ATP13A4 (ENSODEG00000002410) OPA1 (ENSODEG00000002648) HES1 (ENSODEG00000002896) LRRC15 (ENSODEG00000002912) ATP13A3 (ENSODEG00000001433) ENSODEG00000018709 ##22 ENSODEG00000001575 FAM43A (ENSODEG00000001588) XXYLT1 (ENSODEG00000001609) ACAP2 (ENSODEG00000001646) ENSODEG00000018770 ENSODEG00000001688 ENSODEG00000018720 RNASE4 (ENSODEG00000018694) ENSODEG00000001749 RNASE10 (ENSODEG00000001824) ENSODEG00000001837 ENSODEG00000001846 PNP (ENSODEG00000001875) ENSODEG00000001888 ENSODEG00000001703 Degu MODERN SPECIES 134 PKP3 (ENSODEG00000014948) B4GALNT4 (ENSODEG00000015497) ENSODEG00000014892 ENSODEG00000014441 IFITM5 (ENSODEG00000014917) PGGHG (ENSODEG00000015256) NLRP6 (ENSODEG00000014679) ENSODEG00000013804 PSMD13 (ENSODEG00000015037) ENSODEG00000014097 SIRT3 (ENSODEG00000014136) RIC8A (ENSODEG00000015235) BET1L (ENSODEG00000013826) ODF3 (ENSODEG00000015176) ENSODEG00000014059 ENSODEG00000020278 ##22 PTCHD3 (ENSODEG00000014626) OR9K2 (ENSODEG00000014841) ENSODEG00000013814 ENSODEG00000015024 NEUROD4 (ENSODEG00000020179) TESPA1 (ENSODEG00000014898) ENSODEG00000013533 PPP1R1A (ENSODEG00000013950) PDE1B (ENSODEG00000013509) NCKAP1L (ENSODEG00000015445) ENSODEG00000013228 GTSF1 (ENSODEG00000014220) ITGA5 (ENSODEG00000014190) ZNF385A (ENSODEG00000013971) GPR84 (ENSODEG00000020196) Degu MODERN SPECIES 89 PGLYRP3 (ENSODEG00000009237) ENSODEG00000008993 ENSODEG00000019689 ENSODEG00000019719 ENSODEG00000012331 ENSODEG00000019776 KPRP (ENSODEG00000009720) ENSODEG00000019631 C1orf68 (ENSODEG00000009558) #10 ENSODEG00000019920 ENSODEG00000010353 ENSODEG00000009304 ENSODEG00000009112 ENSODEG00000019709 ENSODEG00000009608 #21 ENSODEG00000009939 ##22 THEM4 (ENSODEG00000010154) #23 THEM5 (ENSODEG00000009312) #25 C2CD4D (ENSODEG00000010767) #26 ENSODEG00000009680 RORC (ENSODEG00000010665) #27 LINGO4 (ENSODEG00000009935) #28 ENSODEG00000009532 #29 OAZ3 (ENSODEG00000010337) #30 MRPL9 (ENSODEG00000010962) #31 RIIAD1 (ENSODEG00000010181) #33 CELF3 (ENSODEG00000010505) #34 SNX27 (ENSODEG00000011216) #35 ENSODEG00000019964 TUFT1 (ENSODEG00000012013) #36 CGN (ENSODEG00000010397) Degu MODERN SPECIES 117 SDS (ENSODEG00000013475) PLBD2 (ENSODEG00000012900) SLC8B1 (ENSODEG00000012203) TPCN1 (ENSODEG00000014184) IQCD (ENSODEG00000014045) RITA1 (ENSODEG00000012280) DDX54 (ENSODEG00000014863) CFAP73 (ENSODEG00000012352) RASAL1 (ENSODEG00000012525) DTX1 (ENSODEG00000013450) OAS2 (ENSODEG00000013276) OAS3 (ENSODEG00000013221) OAS1 (ENSODEG00000011899) RPH3A (ENSODEG00000012496) ENSODEG00000019909 ENSODEG00000011453 ##22 PTPN11 (ENSODEG00000012557) ENSODEG00000011835 HECTD4 (ENSODEG00000012009) NAA25 (ENSODEG00000010753) MAPKAPK5 (ENSODEG00000011587) ENSODEG00000019875 ALDH2 (ENSODEG00000010888) ENSODEG00000012368 ENSODEG00000012065 BRAP (ENSODEG00000011525) ATXN2 (ENSODEG00000010798) SH2B3 (ENSODEG00000012542) CUX2 (ENSODEG00000013686) ENSODEG00000010703 MYL2 (ENSODEG00000012393) Degu MODERN SPECIES 289 ENSODEG00000000599 ENSODEG00000018600 ENSODEG00000000574 ENSODEG00000000547 ENSODEG00000000513 ISL1 (ENSODEG00000000484) ENSODEG00000018570 ##22 ENSODEG00000000470 ENSODEG00000000441 ENSODEG00000000418 Hystricomorpha_b DUPLICATION Hystricomorpha_b ANCESTRAL SPECIES ENSGT00940000154197.a.a.c.a.b.a ##22 Long-tailed chinchilla MODERN SPECIES 254 KCNH3 (ENSCLAG00000001325) MCRS1 (ENSCLAG00000001468) FAM186B (ENSCLAG00000001623) PRPF40B (ENSCLAG00000001663) FMNL3 (ENSCLAG00000000779) ENSCLAG00000001174 TMBIM6 (ENSCLAG00000001272) NCKAP5L (ENSCLAG00000000530) BCDIN3D (ENSCLAG00000000912) FAIM2 (ENSCLAG00000000961) ENSCLAG00000017426 ##22 AQP2 (ENSCLAG00000000834) AQP5 (ENSCLAG00000000883) AQP6 (ENSCLAG00000001011) RACGAP1 (ENSCLAG00000001084) ASIC1 (ENSCLAG00000000832) SMARCD1 (ENSCLAG00000000946) ENSCLAG00000001015 GPD1 (ENSCLAG00000001367) CERS5 (ENSCLAG00000001516) LIMA1 (ENSCLAG00000000738) ENSCLAG00000001798 LARP4 (ENSCLAG00000001829) DIP2B (ENSCLAG00000002317) ATF1 (ENSCLAG00000000957) TMPRSS12 (ENSCLAG00000000986) Degu MODERN SPECIES 98 SLC44A5 (ENSODEG00000005408) LHX8 (ENSODEG00000005902) TYW3 (ENSODEG00000005361) ENSODEG00000006615 ENSODEG00000006432 ENSODEG00000005954 ##22 FPGT (ENSODEG00000006370) ENSODEG00000005870 NEGR1 (ENSODEG00000005896) ENSODEG00000006491 PTGER3 (ENSODEG00000005473) CTH (ENSODEG00000006417) ANKRD13C (ENSODEG00000005392) SRSF11 (ENSODEG00000006289) LRRC40 (ENSODEG00000005601) LRRC7 (ENSODEG00000006670) ENSODEG00000005510 DEPDC1 (ENSODEG00000005384) RPE65 (ENSODEG00000005046) WLS (ENSODEG00000006216) GNG12 (ENSODEG00000005519) Hystricomorpha_b ANCESTRAL SPECIES 79 ENSGT00940000162465 #12 ENSGT00940000154467.a #16 ENSGT00940000154172 #21 ENSGT00940000154197.a.a.c.a.b.b ##22 ENSGT00940000154197.a.a.c.a.a ##22 ENSGT00940000160047 #23 ENSGT00940000161937 #25 ENSGT00940000163537 #26 ENSGT00940000161521 #27 ENSGT00940000162157 #28 ENSGT00940000159364 #29 ENSGT00940000161581 #30 ENSGT00390000008281 #31 ENSGT00390000003062 #33 ENSGT00940000154716 #34 ENSGT00950000183212.C #35 ENSGT00950000183065.B #36 ENSGT00940000154489.B ENSGT00940000160649 Long-tailed chinchilla MODERN SPECIES 296 CRNN (ENSCLAG00000000319) #12 ENSCLAG00000000326 #16 S100A11 (ENSCLAG00000000334) #21 ENSCLAG00000000361 ##22 ENSCLAG00000000368 THEM4 (ENSCLAG00000000400) #23 THEM5 (ENSCLAG00000000481) #25 RORC (ENSCLAG00000000624) #27 LINGO4 (ENSCLAG00000000770) #28 TDRKH (ENSCLAG00000001088) #29 ENSCLAG00000000442 #30 MRPL9 (ENSCLAG00000000458) #31 CELF3 (ENSCLAG00000000586) #34 SNX27 (ENSCLAG00000000162) #35 TUFT1 (ENSCLAG00000000570) #36 CGN (ENSCLAG00000000672) POGZ (ENSCLAG00000001558) PSMB4 (ENSCLAG00000001775) Hystricomorpha ANCESTRAL SPECIES ENSGT00940000154197.a.a.c.b ##22 Naked mole-rat female MODERN SPECIES ENSHGLG00000043221 ENSHGLG00000009628 SMURF1 (ENSHGLG00000006003) TRRAP (ENSHGLG00000013805) TMEM130 (ENSHGLG00000008380) ENSHGLG00000042548 ENSHGLG00000007737 ENSHGLG00000044552 BAIAP2L1 (ENSHGLG00000017707) ENSHGLG00000032492 ENSHGLG00000013687 ENSHGLG00000015104 TECPR1 (ENSHGLG00000018344) BHLHA15 (ENSHGLG00000033900) LMTK2 (ENSHGLG00000013780) ENSHGLG00000013637 ##22 ENSHGLG00000020676 ENSHGLG00000009254 ENSHGLG00000007267 ENSHGLG00000010064 ENSHGLG00000038861 PMS2 (ENSHGLG00000007741) AIMP2 (ENSHGLG00000041958) ANKRD61 (ENSHGLG00000005518) EIF2AK1 (ENSHGLG00000015194) ENSHGLG00000035813 USP42 (ENSHGLG00000018062) ENSHGLG00000017988 ENSHGLG00000041754 ENSHGLG00000040110 RAC1 (ENSHGLG00000009964) Hystricomorpha_a ANCESTRAL SPECIES ENSGT00940000154197.a.a.c.b ##22 Hystricomorpha_b ANCESTRAL SPECIES ENSGT00940000154197.a.a.c.b ##22 Degu MODERN SPECIES 66 OSGEPL1 (ENSODEG00000012428) ANKAR (ENSODEG00000010860) ENSODEG00000010944 SLC40A1 (ENSODEG00000010608) ENSODEG00000010565 WDR75 (ENSODEG00000010890) ENSODEG00000019783 ENSODEG00000009648 ENSODEG00000019830 COL5A2 (ENSODEG00000010110) COL3A1 (ENSODEG00000010707) GULP1 (ENSODEG00000010757) CALCRL (ENSODEG00000014219) ZSWIM2 (ENSODEG00000010673) FAM171B (ENSODEG00000011840) ENSODEG00000019974 ##22 ITGAV (ENSODEG00000013327) ZC3H15 (ENSODEG00000010533) ENSODEG00000011277 FSIP2 (ENSODEG00000011670) ZNF804A (ENSODEG00000011236) ENSODEG00000010656 ENSODEG00000011356 ENSODEG00000011202 DUSP19 (ENSODEG00000012741) NCKAP1 (ENSODEG00000012291) FRZB (ENSODEG00000011697) DNAJC10 (ENSODEG00000011257) PDE1A (ENSODEG00000011693) PPP1R1C (ENSODEG00000012042) ITPRID2 (ENSODEG00000011169) Long-tailed chinchilla DUPLICATION Long-tailed chinchilla MODERN SPECIES 119 TBRG1 (ENSCLAG00000015488) SIAE (ENSCLAG00000015817) SPA17 (ENSCLAG00000016272) NRGN (ENSCLAG00000016686) VSIG2 (ENSCLAG00000015241) ESAM (ENSCLAG00000014355) MSANTD2 (ENSCLAG00000015862) ROBO3 (ENSCLAG00000016155) ROBO4 (ENSCLAG00000016907) HEPACAM (ENSCLAG00000015210) CCDC15 (ENSCLAG00000015010) SLC37A2 (ENSCLAG00000017318) TMEM218 (ENSCLAG00000015737) PKNOX2 (ENSCLAG00000014511) FEZ1 (ENSCLAG00000013933) ENSCLAG00000017926 ##22 EI24 (ENSCLAG00000015350) STT3A (ENSCLAG00000015037) ENSCLAG00000014393 ACRV1 (ENSCLAG00000015258) ENSCLAG00000014886 PATE1 (ENSCLAG00000017379) PATE2 (ENSCLAG00000014213) PATE3 (ENSCLAG00000016189) ENSCLAG00000013836 HYLS1 (ENSCLAG00000015931) PUS3 (ENSCLAG00000014947) DDX25 (ENSCLAG00000015793) VSIG10L2 (ENSCLAG00000015314) CDON (ENSCLAG00000017248) RPUSD4 (ENSCLAG00000016553) Long-tailed chinchilla MODERN SPECIES 121 AAMDC (ENSCLAG00000013898) INTS4 (ENSCLAG00000015884) NDUFC2 (ENSCLAG00000016641) ALG8 (ENSCLAG00000014914) ENSCLAG00000013655 KCTD21 (ENSCLAG00000015125) USP35 (ENSCLAG00000015220) GAB2 (ENSCLAG00000015175) ENSCLAG00000013569 NARS2 (ENSCLAG00000012233) TENM4 (ENSCLAG00000013721) ENSCLAG00000015167 PRCP (ENSCLAG00000014395) DDIAS (ENSCLAG00000013506) RAB30 (ENSCLAG00000014030) ENSCLAG00000017890 ##22 PCF11 (ENSCLAG00000013830) ANKRD42 (ENSCLAG00000015518) CCDC90B (ENSCLAG00000015859) ENSCLAG00000014879 DLG2 (ENSCLAG00000013708) TMEM126B (ENSCLAG00000015945) TMEM126A (ENSCLAG00000013581) CREBZF (ENSCLAG00000014349) CCDC89 (ENSCLAG00000018101) ENSCLAG00000015658 CCDC83 (ENSCLAG00000013107) PICALM (ENSCLAG00000014073) EED (ENSCLAG00000014597) HIKESHI (ENSCLAG00000015127) CCDC81 (ENSCLAG00000015703) Hystricomorpha ANCESTRAL SPECIES 23 ENSGT00700000104637 ENSGT00730000111592 ENSGT00940000163248.h.a ENSGT00940000165746 ENSGT00780000122937 ENSGT00730000111554 ENSGT00730000111580 #10 ENSGT00940000161842.b ENSGT00940000163498 ENSGT00940000162465 #12 ENSGT00940000154467.b.b.b #13 ENSGT00940000170498 ENSGT00940000154467.b.a #15 ENSGT00940000154467.a #16 ENSGT00940000163983 #17 ENSGT00940000154197.a.a.d ##22 ENSGT00940000160047 #23 ENSGT00940000161937 #25 ENSGT00940000163537 #26 ENSGT00940000161521 #27 ENSGT00940000162157 #28 ENSGT00940000159364 #29 ENSGT00940000161581 #30 ENSGT00390000008281 #31 ENSGT00390000003062 #33 ENSGT00940000154716 #34 ENSGT00950000183212.C #35 ENSGT00950000183065.B #36 ENSGT00940000154489.B ENSGT00940000160649 ENSGT00390000000698 Naked mole-rat female DUPLICATION Naked mole-rat female MODERN SPECIES 14 SART1 (ENSHGLG00000015022) ENSHGLG00000017941 ENSHGLG00000037797 DRAP1 (ENSHGLG00000044653) FOSL1 (ENSHGLG00000040823) CCDC85B (ENSHGLG00000020886) FIBP (ENSHGLG00000009704) CTSW (ENSHGLG00000041472) EFEMP2 (ENSHGLG00000012609) MUS81 (ENSHGLG00000011376) ENSHGLG00000011974 OVOL1 (ENSHGLG00000046156) AP5B1 (ENSHGLG00000014408) RNASEH2C (ENSHGLG00000013478) KAT5 (ENSHGLG00000009569) ENSHGLG00000021418 ##22 RELA (ENSHGLG00000017814) SIPA1 (ENSHGLG00000009520) PCNX3 (ENSHGLG00000010897) MAP3K11 (ENSHGLG00000044782) KCNK7 (ENSHGLG00000012740) EHBP1L1 (ENSHGLG00000019070) FAM89B (ENSHGLG00000013991) SSSCA1 (ENSHGLG00000048216) SCYL1 (ENSHGLG00000018730) FRMD8 (ENSHGLG00000018755) SLC25A45 (ENSHGLG00000007151) TIGD3 (ENSHGLG00000008128) DPF2 (ENSHGLG00000010867) CDC42EP2 (ENSHGLG00000006786) ENSHGLG00000008855 Naked mole-rat female MODERN SPECIES 11 BRPF1 (ENSHGLG00000015700) CPNE9 (ENSHGLG00000013286) MTMR14 (ENSHGLG00000017947) ENSHGLG00000036031 LHFPL4 (ENSHGLG00000043991) ENSHGLG00000012500 SETD5 (ENSHGLG00000016297) ENSHGLG00000016200 SRGAP3 (ENSHGLG00000009965) RAD18 (ENSHGLG00000009196) OXTR (ENSHGLG00000007183) CAV3 (ENSHGLG00000006699) SSUH2 (ENSHGLG00000008957) ENSHGLG00000006418 ENSHGLG00000037885 ENSHGLG00000045449 ##22 ENSHGLG00000033882 ENSHGLG00000009519 ENSHGLG00000038431 ENSHGLG00000009713 ENSHGLG00000006515 ENSHGLG00000018221 ENSHGLG00000014483 EXOG (ENSHGLG00000050843) SCN5A (ENSHGLG00000013636) SCN10A (ENSHGLG00000012062) SCN11A (ENSHGLG00000010002) ENSHGLG00000042198 ENSHGLG00000043603 WDR48 (ENSHGLG00000012849) GORASP1 (ENSHGLG00000011654) Hystricomorpha_a ANCESTRAL SPECIES 59 ENSGT00940000162657 ENSGT00700000104637 ENSGT00730000111592 ENSGT00940000163248.h.a ENSGT00940000165746 ENSGT00730000111554 ENSGT00940000161842.a ENSGT00940000169512 ENSGT00730000111580 #10 ENSGT00940000161842.b ENSGT00940000163498 ENSGT00940000162465 #12 ENSGT00940000154467.a #16 ENSGT00940000154172 #21 ENSGT00940000154197.a.a.c.a ##22 ENSGT00940000154197.a.a.d ##22 ENSGT00940000160047 #23 ENSGT00940000161937 #25 ENSGT00940000163537 #26 ENSGT00940000161521 #27 ENSGT00940000162157 #28 ENSGT00940000159364 #29 ENSGT00940000161581 #30 ENSGT00390000008281 #31 ENSGT00390000003062 #33 ENSGT00940000154716 #34 ENSGT00950000183212.C #35 ENSGT00950000183065.B #36 ENSGT00940000154489.B ENSGT00940000160649 ENSGT00390000000698 Guinea pig DUPLICATION Guinea pig MODERN SPECIES 2 ENSCPOG00000030235 ENSCPOG00000037041 ENSCPOG00000030043 ENSCPOG00000030563 ENSCPOG00000033173 ENSCPOG00000032596 ENSCPOG00000035955 ENSCPOG00000030264 ENSCPOG00000040656 ENSCPOG00000032513 ENSCPOG00000039783 ENSCPOG00000034456 ENSCPOG00000027424 ENSCPOG00000021328 #15 S100A11 (ENSCPOG00000009745) #21 ENSCPOG00000033136 ##22 THEM4 (ENSCPOG00000000143) #23 THEM5 (ENSCPOG00000001050) #25 C2CD4D (ENSCPOG00000031360) #26 RORC (ENSCPOG00000023600) #27 LINGO4 (ENSCPOG00000003563) #28 TDRKH (ENSCPOG00000003556) #29 OAZ3 (ENSCPOG00000003550) #30 MRPL9 (ENSCPOG00000021168) #31 CELF3 (ENSCPOG00000003539) #34 SNX27 (ENSCPOG00000007869) #35 TUFT1 (ENSCPOG00000007866) #36 CGN (ENSCPOG00000023121) POGZ (ENSCPOG00000015210) PSMB4 (ENSCPOG00000015209) SELENBP1 (ENSCPOG00000025262) Guinea pig MODERN SPECIES CSNK1G1 (ENSCPOG00000000256) PCLAF (ENSCPOG00000033197) TRIP4 (ENSCPOG00000006483) ZNF609 (ENSCPOG00000001956) OAZ2 (ENSCPOG00000001960) RBPMS2 (ENSCPOG00000007695) PIF1 (ENSCPOG00000008211) PLEKHO2 (ENSCPOG00000030376) BTD (ENSCPOG00000024569) ANKRD28 (ENSCPOG00000015199) GALNT15 (ENSCPOG00000003476) DPH3 (ENSCPOG00000003477) OXNAD1 (ENSCPOG00000026881) RFTN1 (ENSCPOG00000007616) ENSCPOG00000007628 ENSCPOG00000003836 ##22 PLCL2 (ENSCPOG00000008396) TBC1D5 (ENSCPOG00000011184) SATB1 (ENSCPOG00000007101) KCNH8 (ENSCPOG00000033526) EFHB (ENSCPOG00000001936) RAB5A (ENSCPOG00000005322) ENSCPOG00000008310 ENSCPOG00000032533 SGO1 (ENSCPOG00000008318) ENSCPOG00000020230 ZNF385D (ENSCPOG00000033668) UBE2E2 (ENSCPOG00000034482) UBE2E1 (ENSCPOG00000002251) NKIRAS1 (ENSCPOG00000038523) ENSCPOG00000030042 Primates ANCESTRAL SPECIES ENSGT00940000154197.a.a ##22 Haplorrhini ANCESTRAL SPECIES ENSGT00940000154197.a.a ##22 Simiiformes ANCESTRAL SPECIES 79 ENSGT00940000154172.gb.a #21 ENSGT00940000154197.a.a ##22 Platyrrhini ANCESTRAL SPECIES 12 ENSGT00940000164168 ENSGT00950000183312 ENSGT00950000183278 ENSGT00950000183301 ENSGT00730000111554 ENSGT00730000111580 #10 ENSGT00940000161842.b ENSGT00940000161842.a ENSGT00940000162465 #12 ENSGT00940000154467.b.b.b #13 ENSGT00940000154467.a #16 ENSGT00940000163983 #17 ENSGT00940000162966 #18 ENSGT00940000154172.gb.b.a.b #21 ENSGT00940000154172.gb.a #21 ENSGT00940000154197.a.a ##22 ENSGT00940000154197.b.b #22 ENSGT00940000160047 #23 ENSGT00940000161937 #25 ENSGT00940000161521 #27 ENSGT00940000162157 #28 ENSGT00940000159364 #29 ENSGT00940000161581 #30 ENSGT00390000008281 #31 ENSGT00390000003062 #33 ENSGT00940000154716 #34 ENSGT00950000183212.C #35 ENSGT00950000183065.B #36 ENSGT00940000154489.B ENSGT00940000160649 ENSGT00390000000698 Cebidae ANCESTRAL SPECIES 12 ENSGT00940000163248.c ENSGT00940000164168 ENSGT00950000183312 ENSGT00950000183278 ENSGT00950000183301 ENSGT00730000111554 ENSGT00730000111580 #10 ENSGT00940000161842.b ENSGT00940000161842.a ENSGT00940000162465 #12 ENSGT00940000154467.b.b.b #13 ENSGT00940000163983 #17 ENSGT00940000162966 #18 ENSGT00940000154172.gb.b.a.b #21 ENSGT00940000154172.gb.a #21 ENSGT00940000154197.a.a ##22 ENSGT00940000154197.b.b #22 ENSGT00940000160047 #23 ENSGT00940000161937 #25 ENSGT00940000161521 #27 ENSGT00940000162157 #28 ENSGT00940000159364 #29 ENSGT00940000161581 #30 ENSGT00390000008281 #31 ENSGT00390000003062 #33 ENSGT00940000154716 #34 ENSGT00950000183212.C #35 ENSGT00950000183065.B #36 ENSGT00940000154489.B ENSGT00940000160649 ENSGT00390000000698 Cebidae_a ANCESTRAL SPECIES 6 ENSGT00910000148549 ENSGT00940000163248.c ENSGT00940000164168 ENSGT00950000183312 ENSGT00950000183278 ENSGT00950000183301 ENSGT00730000111580 #10 ENSGT00940000161842.b ENSGT00940000161842.a ENSGT00940000162465 #12 ENSGT00940000154467.b.b.b #13 ENSGT00940000163983 #17 ENSGT00940000162966 #18 ENSGT00940000154172.gb.b.a.b #21 ENSGT00940000154172.gb.a #21 ENSGT00940000154197.a.a ##22 ENSGT00940000160047 #23 ENSGT00940000161937 #25 ENSGT00940000161521 #27 ENSGT00940000162157 #28 ENSGT00940000159364 #29 ENSGT00940000161581 #30 ENSGT00390000008281 #31 ENSGT00390000003062 #33 ENSGT00940000154716 #34 ENSGT00950000183212.C #35 ENSGT00950000183065.B #36 ENSGT00940000162698 #37 ENSGT00940000160649 ENSGT00390000000698 ENSGT00390000014244 Capuchin DUPLICATION Capuchin MODERN SPECIES 188 ENSCCAG00000000482 ENSCCAG00000022287 ENSCCAG00000038032 EPHA6 (ENSCCAG00000031909) CRYBG3 (ENSCCAG00000020427) ENSCCAG00000029436 RIOX2 (ENSCCAG00000030243) GABRR3 (ENSCCAG00000029478) ENSCCAG00000005085 ENSCCAG00000031108 ENSCCAG00000037070 ENSCCAG00000033454 ##22 THEM4 (ENSCCAG00000036356) #23 THEM5 (ENSCCAG00000024196) #25 RORC (ENSCCAG00000023227) #27 LINGO4 (ENSCCAG00000000332) #28 TDRKH (ENSCCAG00000033931) #29 ENSCCAG00000003431 OAZ3 (ENSCCAG00000036424) #30 MRPL9 (ENSCCAG00000021688) #31 ENSCCAG00000016289 RIIAD1 (ENSCCAG00000032663) #33 CELF3 (ENSCCAG00000024686) #34 SNX27 (ENSCCAG00000030256) #35 TUFT1 (ENSCCAG00000032389) #36 CGN (ENSCCAG00000037078) POGZ (ENSCCAG00000026952) Capuchin MODERN SPECIES 15 EFHD2 (ENSCCAG00000019849) FHAD1 (ENSCCAG00000035375) TMEM51 (ENSCCAG00000033420) ENSCCAG00000037569 ENSCCAG00000025007 KAZN (ENSCCAG00000023463) PRDM2 (ENSCCAG00000025776) PDPN (ENSCCAG00000021068) LRRC38 (ENSCCAG00000016310) ENSCCAG00000034267 ENSCCAG00000032669 CFAP107 (ENSCCAG00000023379) AADACL3 (ENSCCAG00000015991) AADACL4 (ENSCCAG00000031095) DHRS3 (ENSCCAG00000019005) ENSCCAG00000032853 ##22 VPS13D (ENSCCAG00000037026) TNFRSF1B (ENSCCAG00000020210) TNFRSF8 (ENSCCAG00000037813) MIIP (ENSCCAG00000026110) MFN2 (ENSCCAG00000026866) PLOD1 (ENSCCAG00000024821) KIAA2013 (ENSCCAG00000027133) NPPB (ENSCCAG00000025898) NPPA (ENSCCAG00000013861) CLCN6 (ENSCCAG00000005206) MTHFR (ENSCCAG00000028756) AGTRAP (ENSCCAG00000025860) DRAXIN (ENSCCAG00000018504) MAD2L2 (ENSCCAG00000036598) FBXO6 (ENSCCAG00000019334) Bolivian squirrel monkey MODERN SPECIES 194 S100A12 (ENSSBOG00000030134) S100A9 (ENSSBOG00000031384) PGLYRP4 (ENSSBOG00000024082) PGLYRP3 (ENSSBOG00000032598) SPRR3 (ENSSBOG00000011388) SPRR5 (ENSSBOG00000035155) LCE1A (ENSSBOG00000023695) ENSSBOG00000035924 ENSSBOG00000024630 C1orf68 (ENSSBOG00000032379) #10 LCE5A (ENSSBOG00000022733) CRNN (ENSSBOG00000023767) #12 ENSSBOG00000034501 #13 TCHHL1 (ENSSBOG00000026405) #18 ENSSBOG00000030591 #21 ENSSBOG00000026767 ##22 ENSSBOG00000019139 THEM4 (ENSSBOG00000035386) #23 RORC (ENSSBOG00000022092) #27 LINGO4 (ENSSBOG00000004029) #28 TDRKH (ENSSBOG00000034454) #29 OAZ3 (ENSSBOG00000028594) #30 MRPL9 (ENSSBOG00000018541) #31 RIIAD1 (ENSSBOG00000035260) #33 CELF3 (ENSSBOG00000021984) #34 SNX27 (ENSSBOG00000030853) #35 ENSSBOG00000013368 TUFT1 (ENSSBOG00000026491) #36 ENSSBOG00000004474 #37 ENSSBOG00000030486 POGZ (ENSSBOG00000021437) Tarsier MODERN SPECIES 7233 MXRA5 (ENSTSYG00000027876) ENSTSYG00000003818 ##22 NCAM2 (ENSTSYG00000000382) ENSTSYG00000035013 ENSTSYG00000037178 Eutheria DUPLICATION Eutheria DUPLICATION Eutheria ANCESTRAL SPECIES ENSGT00940000154197.a.b.a.a ##22 Boreoeutheria ANCESTRAL SPECIES ENSGT00940000154197.a.b.a.a ##22 Euarchontoglires ANCESTRAL SPECIES ENSGT00940000154197.a.b.a.a ##22 Primates ANCESTRAL SPECIES ENSGT00940000154197.a.b.a.a ##22 Haplorrhini ANCESTRAL SPECIES ENSGT00940000154197.a.b.a.a ##22 Simiiformes ANCESTRAL SPECIES ENSGT00940000154197.a.b.a.a ##22 Platyrrhini ANCESTRAL SPECIES ENSGT00940000154197.a.b.a.a ##22 Cebidae ANCESTRAL SPECIES ENSGT00940000154197.a.b.a.a ##22 Cebidae_a ANCESTRAL SPECIES ENSGT00940000154197.a.b.a.a ##22 Capuchin MODERN SPECIES 147 ENSCCAG00000023140 LRIG1 (ENSCCAG00000033301) KBTBD8 (ENSCCAG00000006761) SUCLG2 (ENSCCAG00000028963) TAFA1 (ENSCCAG00000026684) TAFA4 (ENSCCAG00000024091) EOGT (ENSCCAG00000025152) ENSCCAG00000037451 TMF1 (ENSCCAG00000002333) ENSCCAG00000003895 ##22 ENSCCAG00000023356 ARL6IP5 (ENSCCAG00000022257) LMOD3 (ENSCCAG00000027483) FRMD4B (ENSCCAG00000033149) ENSCCAG00000026482 MITF (ENSCCAG00000030554) MDFIC2 (ENSCCAG00000000010) FOXP1 (ENSCCAG00000032400) ENSCCAG00000026912 CENPQ (ENSCCAG00000001112) GLYATL3 (ENSCCAG00000030719) Marmoset MODERN SPECIES 18 DYNC1I2 (ENSCJAG00000007196) CYBRD1 (ENSCJAG00000007191) ENSCJAG00000073146 DCAF17 (ENSCJAG00000007161) METTL8 (ENSCJAG00000007144) ENSCJAG00000076253 TLK1 (ENSCJAG00000007075) ENSCJAG00000085300 GORASP2 (ENSCJAG00000041588) GAD1 (ENSCJAG00000006984) ENSCJAG00000006973 ENSCJAG00000080990 SP5 (ENSCJAG00000006965) ENSCJAG00000053960 MYO3B (ENSCJAG00000006877) ENSCJAG00000085881 ##22 ENSCJAG00000073178 UBR3 (ENSCJAG00000006779) ENSCJAG00000079105 METTL5 (ENSCJAG00000006777) ENSCJAG00000045073 KLHL23 (ENSCJAG00000006681) PHOSPHO2 (ENSCJAG00000037335) CFAP210 (ENSCJAG00000081525) ENSCJAG00000086646 PPIG (ENSCJAG00000006612) FASTKD1 (ENSCJAG00000006566) KLHL41 (ENSCJAG00000040542) ENSCJAG00000086077 ENSCJAG00000081975 LRP2 (ENSCJAG00000006333) Euarchontoglires_A ANCESTRAL SPECIES ENSGT00940000154197.a.b.a.a ##22 Glires ANCESTRAL SPECIES ENSGT00940000154197.a.b.a.a ##22 Rodentia ANCESTRAL SPECIES ENSGT00940000154197.a.b.a.a ##22 Rodentia_A ANCESTRAL SPECIES ENSGT00940000154197.a.b.a.a ##22 Hystricomorpha ANCESTRAL SPECIES ENSGT00940000154197.a.b.a.a ##22 Naked mole-rat female MODERN SPECIES 9 ENSHGLG00000009522 PSTPIP2 (ENSHGLG00000005740) SLC14A1 (ENSHGLG00000007316) ENSHGLG00000005880 ENSHGLG00000046959 ENSHGLG00000033588 ENSHGLG00000040364 ENSHGLG00000001864 ENSHGLG00000041163 ENSHGLG00000043125 ENSHGLG00000002070 ENSHGLG00000039994 ENSHGLG00000048003 ENSHGLG00000048589 RIT2 (ENSHGLG00000002499) ENSHGLG00000037189 ##22 ENSHGLG00000001588 PIK3C3 (ENSHGLG00000002317) ENSHGLG00000049729 ENSHGLG00000040708 ENSHGLG00000003144 ENSHGLG00000049047 CELF4 (ENSHGLG00000003130) KIAA1328 (ENSHGLG00000044346) ENSHGLG00000035997 FHOD3 (ENSHGLG00000000428) MOCOS (ENSHGLG00000001785) ELP2 (ENSHGLG00000001838) SLC39A6 (ENSHGLG00000001373) ENSHGLG00000001188 C18orf21 (ENSHGLG00000038453) Eutheria ANCESTRAL SPECIES ENSGT00940000154197.a.b.a.b ##22 Boreoeutheria ANCESTRAL SPECIES ENSGT00940000154197.a.b.a.b ##22 Laurasiatheria ANCESTRAL SPECIES ENSGT00940000154197.a.b.a.b ##22 Laurasiatheria_a ANCESTRAL SPECIES ENSGT00940000154197.a.b.a.b ##22 Artiodactyla ANCESTRAL SPECIES ENSGT00940000154197.a.b.a.b ##22 Artiodactyla_a ANCESTRAL SPECIES ENSGT00940000154197.a.b.a.b ##22 Camelidae ANCESTRAL SPECIES ENSGT00940000154197.a.b.a.b ##22 Arabian camel DUPLICATION Arabian camel MODERN SPECIES 3 METAP2 (ENSCDRG00005020004) VEZT (ENSCDRG00005020149) ENSCDRG00005020169 FGD6 (ENSCDRG00005020179) NR2C1 (ENSCDRG00005020214) ENSCDRG00005020236 TMCC3 (ENSCDRG00005020264) CEP83 (ENSCDRG00005020280) ENSCDRG00005020305 PLXNC1 (ENSCDRG00005020326) CRADD (ENSCDRG00005020435) SOCS2 (ENSCDRG00005020456) ENSCDRG00005020466 UBE2N (ENSCDRG00005020486) ENSCDRG00005020498 ENSCDRG00005020504 ##22 EEA1 (ENSCDRG00005020578) ENSCDRG00005021459 DCN (ENSCDRG00005021468) LUM (ENSCDRG00005021485) KERA (ENSCDRG00005021487) EPYC (ENSCDRG00005021491) CCER1 (ENSCDRG00005021493) ATP2B1 (ENSCDRG00005021499) POC1B (ENSCDRG00005021510) DUSP6 (ENSCDRG00005021513) KITLG (ENSCDRG00005021518) TMTC3 (ENSCDRG00005021523) CEP290 (ENSCDRG00005021536) C12orf29 (ENSCDRG00005021555) C12orf50 (ENSCDRG00005021566) Arabian camel MODERN SPECIES 204 ENSCDRG00005011180 PGRMC1 (ENSCDRG00005011247) ENSCDRG00005011276 SLC25A43 (ENSCDRG00005011317) SLC25A5 (ENSCDRG00005011360) STEEP1 (ENSCDRG00005011405) UBE2A (ENSCDRG00005011537) NKRF (ENSCDRG00005011784) SEPTIN6 (ENSCDRG00005011874) SOWAHD (ENSCDRG00005013280) ENSCDRG00005013301 ENSCDRG00005013320 UPF3B (ENSCDRG00005013350) ENSCDRG00005013451 NDUFA1 (ENSCDRG00005013461) ENSCDRG00005013504 ##22 ENSCDRG00005013519 NKAP (ENSCDRG00005013553) ZBTB33 (ENSCDRG00005013633) TMEM255A (ENSCDRG00005013662) ATP1B4 (ENSCDRG00005013852) ENSCDRG00005014026 LAMP2 (ENSCDRG00005014050) CUL4B (ENSCDRG00005014173) MCTS1 (ENSCDRG00005014524) C1GALT1C1 (ENSCDRG00005006244) ENSCDRG00005006259 ENSCDRG00005006287 GRIA3 (ENSCDRG00005006337) THOC2 (ENSCDRG00005006591) XIAP (ENSCDRG00005006872) Euarchontoglires ANCESTRAL SPECIES ENSGT00940000154197.a.b.a.b ##22 Euarchontoglires_A ANCESTRAL SPECIES ENSGT00940000154197.a.b.a.b ##22 Glires ANCESTRAL SPECIES ENSGT00940000154197.a.b.a.b ##22 Rodentia ANCESTRAL SPECIES ENSGT00940000154197.a.b.a.b ##22 Rodentia_A ANCESTRAL SPECIES ENSGT00940000154197.a.b.a.b ##22 Hystricomorpha ANCESTRAL SPECIES ENSGT00940000154197.a.b.a.b ##22 Naked mole-rat female MODERN SPECIES 1 ENSHGLG00000033331 ENSHGLG00000013569 CLNK (ENSHGLG00000018872) ZNF518B (ENSHGLG00000043144) ENSHGLG00000037795 ENSHGLG00000045526 WDR1 (ENSHGLG00000017187) SLC2A9 (ENSHGLG00000017198) DRD5 (ENSHGLG00000014396) ENSHGLG00000014488 ENSHGLG00000014536 LYAR (ENSHGLG00000039937) ZBTB49 (ENSHGLG00000046826) NSG1 (ENSHGLG00000014668) STX18 (ENSHGLG00000004074) ENSHGLG00000032792 ##22 MSX1 (ENSHGLG00000004181) CYTL1 (ENSHGLG00000043228) STK32B (ENSHGLG00000004329) EVC2 (ENSHGLG00000004386) ENSHGLG00000046624 EVC (ENSHGLG00000004462) CRMP1 (ENSHGLG00000004859) ENSHGLG00000041518 JAKMIP1 (ENSHGLG00000005253) ENSHGLG00000049306 WFS1 (ENSHGLG00000005950) PPP2R2C (ENSHGLG00000050574) MAN2B2 (ENSHGLG00000006658) ENSHGLG00000007042 ENSHGLG00000007372 Hystricomorpha_a ANCESTRAL SPECIES ENSGT00940000154197.a.b.a.b ##22 Hystricomorpha_b ANCESTRAL SPECIES ENSGT00940000154197.a.b.a.b ##22 Degu MODERN SPECIES 136 FOXB2 (ENSODEG00000018997) VPS13A (ENSODEG00000003608) ENSODEG00000003546 GNA14 (ENSODEG00000003528) ENSODEG00000003499 GNAQ (ENSODEG00000003488) CEP78 (ENSODEG00000003443) ENSODEG00000003423 ENSODEG00000003369 ENSODEG00000018927 ENSODEG00000003341 ENSODEG00000018932 TLE4 (ENSODEG00000003247) ENSODEG00000003198 ENSODEG00000003548 ENSODEG00000018925 ##22 ENSODEG00000018969 TLE1 (ENSODEG00000003417) Primates ANCESTRAL SPECIES ENSGT00940000154197.a.b.a.b ##22 Haplorrhini ANCESTRAL SPECIES ENSGT00940000154197.a.b.a.b ##22 Simiiformes ANCESTRAL SPECIES ENSGT00940000154197.a.b.a.b ##22 Platyrrhini ANCESTRAL SPECIES ENSGT00940000154197.a.b.a.b ##22 Cebidae ANCESTRAL SPECIES ENSGT00940000154197.a.b.a.b ##22 Marmoset MODERN SPECIES 11 ANKH (ENSCJAG00000010839) OTULIN (ENSCJAG00000010884) OTULINL (ENSCJAG00000010893) TRIO (ENSCJAG00000010904) ENSCJAG00000072293 DNAH5 (ENSCJAG00000009326) ENSCJAG00000076372 ENSCJAG00000071150 ENSCJAG00000074642 ENSCJAG00000080282 ENSCJAG00000004019 CTNND2 (ENSCJAG00000009238) ENSCJAG00000085149 ENSCJAG00000046611 ANKRD33B (ENSCJAG00000009224) ENSCJAG00000083278 ##22 MARCHF6 (ENSCJAG00000009091) ENSCJAG00000045979 ENSCJAG00000008977 ATPSCKMT (ENSCJAG00000070705) TAS2R1 (ENSCJAG00000077757) SEMA5A (ENSCJAG00000008962) MTRR (ENSCJAG00000008934) FASTKD3 (ENSCJAG00000008921) CFAP90 (ENSCJAG00000076097) ADCY2 (ENSCJAG00000008816) ENSCJAG00000084205 ENSCJAG00000087014 TENT4A (ENSCJAG00000008742) SRD5A1 (ENSCJAG00000008724) NSUN2 (ENSCJAG00000008689) Mas night monkey MODERN SPECIES 420 ENSANAG00000028546 CFAP107 (ENSANAG00000030170) AADACL3 (ENSANAG00000033163) AADACL4 (ENSANAG00000032471) DHRS3 (ENSANAG00000027681) VPS13D (ENSANAG00000025435) ENSANAG00000019767 ##22 TNFRSF1B (ENSANAG00000023322) ENSANAG00000022475 MIIP (ENSANAG00000022537) MFN2 (ENSANAG00000025746) PLOD1 (ENSANAG00000026221) KIAA2013 (ENSANAG00000033876) NPPB (ENSANAG00000036307) NPPA (ENSANAG00000027225) CLCN6 (ENSANAG00000021449) MTHFR (ENSANAG00000035602) AGTRAP (ENSANAG00000020534) DRAXIN (ENSANAG00000025619) MAD2L2 (ENSANAG00000029506) FBXO6 (ENSANAG00000033362) FBXO2 (ENSANAG00000037782) Atlantogenata ANCESTRAL SPECIES ENSGT00940000154197.a.b.a.b ##22 Xenarthra ANCESTRAL SPECIES ENSGT00940000154197.a.b.a.b ##22 Armadillo MODERN SPECIES 1085 SCNN1G (ENSDNOG00000035014) ENSDNOG00000036348 ##22 SCNN1B (ENSDNOG00000042796) COG7 (ENSDNOG00000035351) GGA2 (ENSDNOG00000046308) EARS2 (ENSDNOG00000042899) UBFD1 (ENSDNOG00000001261) ENSDNOG00000017122 PALB2 (ENSDNOG00000017609) DCTN5 (ENSDNOG00000017614) PLK1 (ENSDNOG00000017616) ERN2 (ENSDNOG00000017619) ENSDNOG00000047760 Eutheria ANCESTRAL SPECIES ENSGT00940000154197.a.b.b ##22 Boreoeutheria ANCESTRAL SPECIES ENSGT00940000154197.a.b.b ##22 Euarchontoglires ANCESTRAL SPECIES ENSGT00940000154197.a.b.b ##22 Primates ANCESTRAL SPECIES ENSGT00940000154197.a.b.b ##22 Strepsirrhini DUPLICATION Strepsirrhini DUPLICATION Strepsirrhini DUPLICATION Strepsirrhini ANCESTRAL SPECIES ENSGT00940000154197.a.b.b.a.a.a ##22 Bushbaby DUPLICATION Bushbaby DUPLICATION Bushbaby DUPLICATION Bushbaby DUPLICATION Bushbaby MODERN SPECIES 119 RBM12B (ENSOGAG00000002979) TMEM67 (ENSOGAG00000002980) PDP1 (ENSOGAG00000002984) CDH17 (ENSOGAG00000002985) GEM (ENSOGAG00000007849) FSBP (ENSOGAG00000007859) RAD54B (ENSOGAG00000007854) VIRMA (ENSOGAG00000013555) ENSOGAG00000025900 ESRP1 (ENSOGAG00000000917) DPY19L4 (ENSOGAG00000001710) INTS8 (ENSOGAG00000008861) CCNE2 (ENSOGAG00000034667) TP53INP1 (ENSOGAG00000008871) NDUFAF6 (ENSOGAG00000028131) ENSOGAG00000030916 ##22 PLEKHF2 (ENSOGAG00000015131) CFAP418 (ENSOGAG00000007222) GDF6 (ENSOGAG00000034193) UQCRB (ENSOGAG00000004302) MTERF3 (ENSOGAG00000004303) PTDSS1 (ENSOGAG00000004305) ENSOGAG00000034918 SDC2 (ENSOGAG00000014867) ENSOGAG00000027986 CPQ (ENSOGAG00000014871) TSPYL5 (ENSOGAG00000025044) MTDH (ENSOGAG00000002065) ENSOGAG00000000512 MATN2 (ENSOGAG00000000513) ERICH5 (ENSOGAG00000001464) Bushbaby MODERN SPECIES 271 GALE (ENSOGAG00000009375) HMGCL (ENSOGAG00000009381) FUCA1 (ENSOGAG00000009383) CNR2 (ENSOGAG00000011818) PNRC2 (ENSOGAG00000024747) SRSF10 (ENSOGAG00000015374) MYOM3 (ENSOGAG00000010702) IL22RA1 (ENSOGAG00000024442) ENSOGAG00000010712 GRHL3 (ENSOGAG00000011027) STPG1 (ENSOGAG00000011033) NIPAL3 (ENSOGAG00000011036) RCAN3 (ENSOGAG00000015460) NCMAP (ENSOGAG00000008361) SRRM1 (ENSOGAG00000010210) ENSOGAG00000030641 ##22 ENSOGAG00000025062 CLIC4 (ENSOGAG00000014620) RUNX3 (ENSOGAG00000025633) SYF2 (ENSOGAG00000009962) RSRP1 (ENSOGAG00000011942) TMEM50A (ENSOGAG00000028512) ENSOGAG00000011983 MACO1 (ENSOGAG00000033230) LDLRAP1 (ENSOGAG00000002101) MAN1C1 (ENSOGAG00000002102) ENSOGAG00000024972 MTFR1L (ENSOGAG00000002104) AUNIP (ENSOGAG00000034108) PAQR7 (ENSOGAG00000024814) STMN1 (ENSOGAG00000002109) Bushbaby MODERN SPECIES 163 PLEKHA3 (ENSOGAG00000002724) ENSOGAG00000029563 ENSOGAG00000025603 CCDC141 (ENSOGAG00000003186) SESTD1 (ENSOGAG00000011106) ZNF385B (ENSOGAG00000008520) CWC22 (ENSOGAG00000015287) ENSOGAG00000029031 UBE2E3 (ENSOGAG00000014956) ITGA4 (ENSOGAG00000016121) CERKL (ENSOGAG00000016136) NEUROD1 (ENSOGAG00000025613) ITPRID2 (ENSOGAG00000016144) PPP1R1C (ENSOGAG00000012382) PDE1A (ENSOGAG00000012388) ENSOGAG00000024215 ##22 DNAJC10 (ENSOGAG00000006969) FRZB (ENSOGAG00000028815) NCKAP1 (ENSOGAG00000013902) DUSP19 (ENSOGAG00000011915) NUP35 (ENSOGAG00000011920) ZNF804A (ENSOGAG00000006031) FSIP2 (ENSOGAG00000028853) ENSOGAG00000033143 ZC3H15 (ENSOGAG00000002182) ITGAV (ENSOGAG00000002184) FAM171B (ENSOGAG00000002185) ZSWIM2 (ENSOGAG00000004269) Bushbaby MODERN SPECIES 266 KCTD19 (ENSOGAG00000000017) LRRC36 (ENSOGAG00000000018) TPPP3 (ENSOGAG00000000019) ZDHHC1 (ENSOGAG00000000020) HSD11B2 (ENSOGAG00000028718) ATP6V0D1 (ENSOGAG00000000021) AGRP (ENSOGAG00000034563) RIPOR1 (ENSOGAG00000011861) CTCF (ENSOGAG00000011901) CARMIL2 (ENSOGAG00000011908) ACD (ENSOGAG00000033562) PARD6A (ENSOGAG00000027845) ENKD1 (ENSOGAG00000004579) C16orf86 (ENSOGAG00000032116) GFOD2 (ENSOGAG00000024864) ENSOGAG00000015553 ##22 RANBP10 (ENSOGAG00000015555) TSNAXIP1 (ENSOGAG00000015558) CENPT (ENSOGAG00000015562) THAP11 (ENSOGAG00000034339) NUTF2 (ENSOGAG00000015568) EDC4 (ENSOGAG00000015571) NRN1L (ENSOGAG00000034854) PSKH1 (ENSOGAG00000028446) CTRL (ENSOGAG00000033388) PSMB10 (ENSOGAG00000015584) LCAT (ENSOGAG00000031091) SLC12A4 (ENSOGAG00000015587) DPEP3 (ENSOGAG00000012978) DDX28 (ENSOGAG00000016895) DUS2 (ENSOGAG00000016897) Bushbaby MODERN SPECIES 383 CENPI (ENSOGAG00000004149) DRP2 (ENSOGAG00000000288) TAF7L (ENSOGAG00000004540) BTK (ENSOGAG00000004545) ENSOGAG00000004551 GLA (ENSOGAG00000004552) HNRNPH2 (ENSOGAG00000026285) ENSOGAG00000025954 ENSOGAG00000027503 ENSOGAG00000031217 ARMCX1 (ENSOGAG00000012113) ENSOGAG00000030961 ENSOGAG00000031104 ARMCX3 (ENSOGAG00000009662) ARMCX2 (ENSOGAG00000026522) ENSOGAG00000027623 ##22 ENSOGAG00000025423 ENSOGAG00000029188 ZMAT1 (ENSOGAG00000033601) Strepsirrhini ANCESTRAL SPECIES ENSGT00940000154197.a.b.b.a.a.b ##22 Bushbaby DUPLICATION Bushbaby MODERN SPECIES 119 ABRA (ENSOGAG00000013394) OXR1 (ENSOGAG00000013388) ENSOGAG00000025407 ZFPM2 (ENSOGAG00000027431) LRP12 (ENSOGAG00000028805) DPYS (ENSOGAG00000014157) DCSTAMP (ENSOGAG00000014155) RIMS2 (ENSOGAG00000014146) DCAF13 (ENSOGAG00000002277) SLC25A32 (ENSOGAG00000002276) CTHRC1 (ENSOGAG00000002275) FZD6 (ENSOGAG00000002273) ENSOGAG00000025678 ATP6V1C1 (ENSOGAG00000002267) AZIN1 (ENSOGAG00000002265) ENSOGAG00000031370 ##22 KLF10 (ENSOGAG00000014528) ODF1 (ENSOGAG00000014525) UBR5 (ENSOGAG00000004491) RRM2B (ENSOGAG00000004487) NCALD (ENSOGAG00000034513) GRHL2 (ENSOGAG00000004751) ENSOGAG00000032973 ENSOGAG00000027151 ENSOGAG00000033497 PABPC1 (ENSOGAG00000007921) SNX31 (ENSOGAG00000012237) ##35 ANKRD46 (ENSOGAG00000012234) RNF19A (ENSOGAG00000007137) ENSOGAG00000008426 ENSOGAG00000008422 Bushbaby MODERN SPECIES 189 ENSOGAG00000026221 ENSOGAG00000025826 PSD3 (ENSOGAG00000029878) SH2D4A (ENSOGAG00000002176) CSGALNACT1 (ENSOGAG00000002178) INTS10 (ENSOGAG00000000559) LPL (ENSOGAG00000000562) SLC18A1 (ENSOGAG00000000563) ATP6V1B2 (ENSOGAG00000000565) LZTS1 (ENSOGAG00000008162) ENSOGAG00000029073 ##22 GFRA2 (ENSOGAG00000033772) DOK2 (ENSOGAG00000008350) XPO7 (ENSOGAG00000015218) NPM2 (ENSOGAG00000011562) FGF17 (ENSOGAG00000004882) DMTN (ENSOGAG00000029018) FHIP2B (ENSOGAG00000004887) NUDT18 (ENSOGAG00000004890) HR (ENSOGAG00000033391) REEP4 (ENSOGAG00000004897) LGI3 (ENSOGAG00000004899) SFTPC (ENSOGAG00000004903) ENSOGAG00000031859 BMP1 (ENSOGAG00000004905) PHYHIP (ENSOGAG00000004910) Lemuriformes ANCESTRAL SPECIES ENSGT00940000154197.a.b.b.a.a.b ##22 Lemuriformes_a ANCESTRAL SPECIES ENSGT00940000154197.a.b.b.a.a.b ##22 Coquerels sifaka MODERN SPECIES 1028 ENSPCOG00000018955 ##22 Mouse lemur MODERN SPECIES 18 ENSMICG00000009379 CXCL13 (ENSMICG00000036944) CCNG2 (ENSMICG00000011775) ENSMICG00000013070 SEPTIN11 (ENSMICG00000033844) SHROOM3 (ENSMICG00000017895) ENSMICG00000029975 CCDC158 (ENSMICG00000017894) ENSMICG00000036105 STBD1 (ENSMICG00000036847) FAM47E (ENSMICG00000017892) SCARB2 (ENSMICG00000017891) NUP54 (ENSMICG00000000932) ART3 (ENSMICG00000000929) ENSMICG00000034311 ENSMICG00000000084 ##22 CXCL11 (ENSMICG00000029161) CXCL10 (ENSMICG00000032301) CXCL9 (ENSMICG00000047710) SDAD1 (ENSMICG00000006682) ENSMICG00000006676 NAAA (ENSMICG00000006663) PPEF2 (ENSMICG00000028039) USO1 (ENSMICG00000006635) G3BP2 (ENSMICG00000007795) CDKL2 (ENSMICG00000031003) ENSMICG00000027502 THAP6 (ENSMICG00000009485) RCHY1 (ENSMICG00000009463) ENSMICG00000044073 ENSMICG00000026631 Strepsirrhini ANCESTRAL SPECIES ENSGT00950000183312 ENSGT00950000183278 ENSGT00950000183301 ENSGT00730000111554 ENSGT00940000161842.b ENSGT00730000111580 #10 ENSGT00940000163498 ENSGT00730000113097 #11 ENSGT00940000161842.a ENSGT00940000162465 #12 ENSGT00940000154467.b.b.b #13 ENSGT00940000154467.a #16 ENSGT00940000163983 #17 ENSGT00940000162966 #18 ENSGT00940000154172.db #21 ENSGT00940000154197.a.b.b.a.b ##22 ENSGT00940000160047 #23 ENSGT00940000161937 #25 ENSGT00940000163537 #26 ENSGT00940000161521 #27 ENSGT00940000162157 #28 ENSGT00940000159364 #29 ENSGT00940000161581 #30 ENSGT00390000008281 #31 ENSGT00390000003062 #33 ENSGT00940000154716 #34 ENSGT00950000183212.C #35 ENSGT00950000183065.B #36 ENSGT00940000154489.B ENSGT00940000162698 #37 ENSGT00940000160649 Bushbaby DUPLICATION Bushbaby DUPLICATION Bushbaby DUPLICATION Bushbaby MODERN SPECIES 367 ZNF75D (ENSOGAG00000032383) CT55 (ENSOGAG00000007138) ENSOGAG00000033991 ZNF449 (ENSOGAG00000003684) ENSOGAG00000033559 ENSOGAG00000029369 INTS6L (ENSOGAG00000016870) ENSOGAG00000003462 SLC9A6 (ENSOGAG00000003464) ENSOGAG00000029465 FHL1 (ENSOGAG00000028911) MAP7D3 (ENSOGAG00000009956) ENSOGAG00000029993 ##22 ADGRG4 (ENSOGAG00000033881) BRS3 (ENSOGAG00000005561) HTATSF1 (ENSOGAG00000005565) VGLL1 (ENSOGAG00000005571) CD40LG (ENSOGAG00000005572) ARHGEF6 (ENSOGAG00000004738) RBMXL1 (ENSOGAG00000007839) Bushbaby MODERN SPECIES 289 KPRP (ENSOGAG00000024925) ENSOGAG00000016304 ENSOGAG00000008210 C1orf68 (ENSOGAG00000011135) #10 ENSOGAG00000008506 CRNN (ENSOGAG00000010176) #12 ENSOGAG00000034312 #13 RPTN (ENSOGAG00000034810) #16 ENSOGAG00000026807 ENSOGAG00000014929 #21 ENSOGAG00000016426 ##22 THEM4 (ENSOGAG00000003191) #23 THEM5 (ENSOGAG00000003189) #25 C2CD4D (ENSOGAG00000033100) #26 RORC (ENSOGAG00000024385) #27 LINGO4 (ENSOGAG00000005085) #28 ENSOGAG00000032357 ENSOGAG00000001839 #29 OAZ3 (ENSOGAG00000001836) #30 ENSOGAG00000030456 #31 CELF3 (ENSOGAG00000001830) #34 ENSOGAG00000005184 TUFT1 (ENSOGAG00000005177) #36 ENSOGAG00000005174 #37 POGZ (ENSOGAG00000008128) PSMB4 (ENSOGAG00000004041) Bushbaby MODERN SPECIES 146 FANCE (ENSOGAG00000002939) ENSOGAG00000024631 PPARD (ENSOGAG00000000630) DEF6 (ENSOGAG00000002936) ZNF76 (ENSOGAG00000002935) SCUBE3 (ENSOGAG00000002933) TCP11 (ENSOGAG00000031615) ENSOGAG00000028462 ANKS1A (ENSOGAG00000008526) TAF11 (ENSOGAG00000008522) BLTP3A (ENSOGAG00000016353) ENSOGAG00000008755 ILRUN (ENSOGAG00000011264) SPDEF (ENSOGAG00000011260) PACSIN1 (ENSOGAG00000029242) ENSOGAG00000027856 ##22 ENSOGAG00000001365 ENSOGAG00000031287 NUDT3 (ENSOGAG00000034590) SMIM29 (ENSOGAG00000015674) ENSOGAG00000025948 GRM4 (ENSOGAG00000029055) MLN (ENSOGAG00000015614) LEMD2 (ENSOGAG00000030156) IP6K3 (ENSOGAG00000015606) UQCC2 (ENSOGAG00000015604) ITPR3 (ENSOGAG00000015581) ENSOGAG00000015578 BAK1 (ENSOGAG00000015573) ZBTB9 (ENSOGAG00000026628) SYNGAP1 (ENSOGAG00000015560) Bushbaby MODERN SPECIES 324 ENSOGAG00000030714 ENSOGAG00000029559 ENSOGAG00000026503 LRRC55 (ENSOGAG00000002476) APLNR (ENSOGAG00000001814) TNKS1BP1 (ENSOGAG00000034200) SSRP1 (ENSOGAG00000014738) P2RX3 (ENSOGAG00000014742) ENSOGAG00000002685 PRG2 (ENSOGAG00000014753) SLC43A3 (ENSOGAG00000030654) RTN4RL2 (ENSOGAG00000015828) SLC43A1 (ENSOGAG00000015830) TIMM10 (ENSOGAG00000025080) ENSOGAG00000029980 ##22 SMTNL1 (ENSOGAG00000024484) UBE2L6 (ENSOGAG00000004503) SERPING1 (ENSOGAG00000004505) YPEL4 (ENSOGAG00000004507) CLP1 (ENSOGAG00000004508) ZDHHC5 (ENSOGAG00000028719) MED19 (ENSOGAG00000004509) TMX2 (ENSOGAG00000026722) ENSOGAG00000025798 CTNND1 (ENSOGAG00000000780) ENSOGAG00000027448 OR6Q1 (ENSOGAG00000009779) ENSOGAG00000031851 OR9I1 (ENSOGAG00000016735) ENSOGAG00000031571 Lemuriformes ANCESTRAL SPECIES 11 ENSGT00940000162349 ENSGT00940000162657 ENSGT01050000248066 ENSGT00950000183301 ENSGT00730000111554 ENSGT00730000111580 #10 ENSGT00940000163498 ENSGT00730000113097 #11 ENSGT00940000161842.a ENSGT00940000162465 #12 ENSGT00940000154467.b.b.b #13 ENSGT00940000154467.a #16 ENSGT00940000163983 #17 ENSGT00940000162966 #18 ENSGT00940000154172.db #21 ENSGT00940000154197.a.b.b.a.b ##22 ENSGT00940000160047 #23 ENSGT00940000161937 #25 ENSGT00940000163537 #26 ENSGT00940000161521 #27 ENSGT00940000162157 #28 ENSGT00940000159364.c.a #29 ENSGT00940000159364.d #29 ENSGT00940000161581 #30 ENSGT00390000008281 #31 ENSGT00390000003062 #33 ENSGT00940000154716 #34 ENSGT00950000183212.C #35 ENSGT00950000183065.B #36 ENSGT00940000154489.B ENSGT00940000162698 #37 Lemuriformes_a ANCESTRAL SPECIES 19 ENSGT00940000161606 ENSGT00940000162349 ENSGT00940000162657 ENSGT01050000248066 ENSGT00730000111554 ENSGT00730000111580 #10 ENSGT00940000163498 ENSGT00730000113097 #11 ENSGT00940000161842.a ENSGT00940000162465 #12 ENSGT00940000154467.b.b.b #13 ENSGT00940000154467.a #16 ENSGT00940000163983 #17 ENSGT00940000162966 #18 ENSGT00940000154172.db #21 ENSGT00940000154197.a.b.b.a.b ##22 ENSGT00940000160047 #23 ENSGT00940000161937 #25 ENSGT00940000163537 #26 ENSGT00940000161521 #27 ENSGT00940000162157 #28 ENSGT00940000159364.d #29 ENSGT00940000161581 #30 ENSGT00390000008281 #31 ENSGT00390000003062 #33 ENSGT00940000154716 #34 ENSGT00950000183212.C #35 ENSGT00950000183065.B #36 ENSGT00940000154489.B ENSGT00940000160649 ENSGT00390000000698 Coquerels sifaka MODERN SPECIES 750 ENSPCOG00000005069 LCE1A (ENSPCOG00000014104) ENSPCOG00000015616 ENSPCOG00000008709 KPRP (ENSPCOG00000021958) C1orf68 (ENSPCOG00000023636) #10 ENSPCOG00000001203 CRCT1 (ENSPCOG00000011277) #11 LCE5A (ENSPCOG00000027645) CRNN (ENSPCOG00000026061) #12 ENSPCOG00000012452 #13 RPTN (ENSPCOG00000026386) #16 ENSPCOG00000027718 TCHHL1 (ENSPCOG00000020430) #18 ENSPCOG00000014836 #21 ENSPCOG00000014964 ##22 THEM4 (ENSPCOG00000027613) #23 THEM5 (ENSPCOG00000028042) #25 RORC (ENSPCOG00000007539) #27 LINGO4 (ENSPCOG00000000761) #28 TDRKH (ENSPCOG00000027505) #29 OAZ3 (ENSPCOG00000006254) #30 MRPL9 (ENSPCOG00000006826) #31 RIIAD1 (ENSPCOG00000019169) #33 CELF3 (ENSPCOG00000004694) #34 SNX27 (ENSPCOG00000024065) #35 TUFT1 (ENSPCOG00000017274) #36 CGN (ENSPCOG00000022079) POGZ (ENSPCOG00000016891) ENSPCOG00000023754 SELENBP1 (ENSPCOG00000015274) Greater bamboo lemur MODERN SPECIES 922 S100A11 (ENSPSMG00000003060) #21 S100A10 (ENSPSMG00000003065) ##22 THEM4 (ENSPSMG00000003087) #23 THEM5 (ENSPSMG00000003096) #25 C2CD4D (ENSPSMG00000003103) #26 RORC (ENSPSMG00000003228) #27 LINGO4 (ENSPSMG00000003452) #28 TDRKH (ENSPSMG00000003537) #29 OAZ3 (ENSPSMG00000003728) #30 MRPL9 (ENSPSMG00000003757) #31 RIIAD1 (ENSPSMG00000003769) #33 CELF3 (ENSPSMG00000003865) #34 SNX27 (ENSPSMG00000003967) #35 TUFT1 (ENSPSMG00000004202) #36 CGN (ENSPSMG00000004302) POGZ (ENSPSMG00000004693) PSMB4 (ENSPSMG00000005066) Mouse lemur MODERN SPECIES 11 ENSMICG00000027685 DRAM2 (ENSMICG00000011901) CEPT1 (ENSMICG00000011912) DENND2D (ENSMICG00000011941) CHI3L2 (ENSMICG00000011949) ENSMICG00000042775 CHIA (ENSMICG00000011957) PIFO (ENSMICG00000011967) WDR77 (ENSMICG00000011979) ATP5PB (ENSMICG00000011992) C1orf162 (ENSMICG00000045892) CRNN (ENSMICG00000035667) #12 RPTN (ENSMICG00000034831) #16 ENSMICG00000028753 S100A11 (ENSMICG00000034130) #21 ENSMICG00000016734 ##22 ENSMICG00000010696 #23 THEM5 (ENSMICG00000035350) #25 RORC (ENSMICG00000030874) #27 ENSMICG00000010682 #29 OAZ3 (ENSMICG00000010676) #30 MRPL9 (ENSMICG00000010669) #31 RIIAD1 (ENSMICG00000033323) #33 CELF3 (ENSMICG00000010644) #34 SNX27 (ENSMICG00000028737) #35 TUFT1 (ENSMICG00000016784) #36 ENSMICG00000016767 #37 POGZ (ENSMICG00000016751) PSMB4 (ENSMICG00000016746) SELENBP1 (ENSMICG00000016742) RFX5 (ENSMICG00000038126) Strepsirrhini ANCESTRAL SPECIES ENSGT00940000154197.a.b.b.b ##22 Bushbaby MODERN SPECIES 177 EP400 (ENSOGAG00000002714) DDX51 (ENSOGAG00000030755) NOC4L (ENSOGAG00000001727) GALNT9 (ENSOGAG00000012405) FBRSL1 (ENSOGAG00000030543) LRCOL1 (ENSOGAG00000006631) P2RX2 (ENSOGAG00000006635) POLE (ENSOGAG00000006639) PXMP2 (ENSOGAG00000006650) PGAM5 (ENSOGAG00000027455) ANKLE2 (ENSOGAG00000006655) GOLGA3 (ENSOGAG00000006661) CHFR (ENSOGAG00000006671) ZNF605 (ENSOGAG00000006676) ZNF26 (ENSOGAG00000024271) ENSOGAG00000028362 ##22 ZNF84 (ENSOGAG00000009951) ZNF140 (ENSOGAG00000030665) ZNF891 (ENSOGAG00000025452) ZNF10 (ENSOGAG00000013194) ZNF268 (ENSOGAG00000029953) ANHX (ENSOGAG00000026442) SOWAHC (ENSOGAG00000032339) SEPTIN10 (ENSOGAG00000016447) SH3RF3 (ENSOGAG00000016444) EDAR (ENSOGAG00000014400) CCDC138 (ENSOGAG00000014396) RANBP2 (ENSOGAG00000028976) LIMS1 (ENSOGAG00000001879) GCC2 (ENSOGAG00000013629) ENSOGAG00000013548 Atlantogenata ANCESTRAL SPECIES ENSGT00940000154197.a.b.b ##22 Afrotheria ANCESTRAL SPECIES ENSGT00940000154197.a.b.b ##22 Afrotheria_a ANCESTRAL SPECIES ENSGT00940000154197.a.b.b ##22 Elephant MODERN SPECIES 285 ALDH1A3 (ENSLAFG00000010792) ASB7 (ENSLAFG00000010803) LINS1 (ENSLAFG00000006970) CERS3 (ENSLAFG00000006966) ADAMTS17 (ENSLAFG00000015058) LYSMD4 (ENSLAFG00000032601) MEF2A (ENSLAFG00000004656) LRRC28 (ENSLAFG00000009935) TTC23 (ENSLAFG00000009934) ENSLAFG00000009928 IGF1R (ENSLAFG00000011658) ENSLAFG00000011319 ENSLAFG00000032652 ARRDC4 (ENSLAFG00000014595) NR2F2 (ENSLAFG00000014404) ENSLAFG00000027420 ##22 MCTP2 (ENSLAFG00000008192) RGMA (ENSLAFG00000017265) CHD2 (ENSLAFG00000016885) ENSLAFG00000032675 FAM174B (ENSLAFG00000003629) ST8SIA2 (ENSLAFG00000013408) SLCO3A1 (ENSLAFG00000013948) SV2B (ENSLAFG00000002850) ENSLAFG00000025938 ENSLAFG00000010529 KLHL25 (ENSLAFG00000010540) ENSLAFG00000009069 NTRK3 (ENSLAFG00000015226) MRPL46 (ENSLAFG00000011931) MRPS11 (ENSLAFG00000030086) Xenarthra ANCESTRAL SPECIES ENSGT00940000154197.a.b.b ##22 Armadillo MODERN SPECIES 4399 ENSDNOG00000043988 ##22 Marsupialia ANCESTRAL SPECIES 2 ENSGT01100000263482.D ENSGT01100000263482.C.c.b.a.b.a.b ENSGT01100000263482.C.c.b.a.a ENSGT01100000263482.C.c.b.a.b.a.a ENSGT01100000263482.C.c.a.b ENSGT01100000263482.C.c.a.a ENSGT00390000016675 ENSGT00940000153818.a.b.a.b ENSGT00940000162465 #12 ENSGT00940000154467.b.b.a.a.b #14 ENSGT00940000154467.b.b.a.a.a.b #14 ENSGT00940000154467.a #16 ENSGT00940000163983 #17 ENSGT00940000162966 #18 ENSGT00940000154172 #21 ENSGT00940000154197 #22 ENSGT00940000161937 #25 ENSGT00940000163537 #26 ENSGT00940000161521 #27 ENSGT00940000162157 #28 ENSGT00940000159364 #29 ENSGT00940000161581 #30 ENSGT00390000008281 #31 ENSGT00390000003062 #33 ENSGT00940000154716 #34 ENSGT00950000183212.C #35 ENSGT00950000183065.B #36 ENSGT00940000162698 #37 ENSGT00940000160649 ENSGT00390000000698 ENSGT00390000014244 Opossum MODERN SPECIES 1 ENSMODG00000028122 ENSMODG00000019120 ENSMODG00000019114 ENSMODG00000025694 ENSMODG00000019113 HEATR6 (ENSMODG00000019111) HNF1B (ENSMODG00000019108) ENSMODG00000047438 ENSMODG00000023202 ENSMODG00000019101 #12 ENSMODG00000025693 #14 ENSMODG00000019097 #14 ENSMODG00000019012 #16 ENSMODG00000018966 S100A11 (ENSMODG00000018920) #21 S100A10 (ENSMODG00000046156) #22 ENSMODG00000018917 #25 C2CD4D (ENSMODG00000027860) #26 RORC (ENSMODG00000018911) #27 TDRKH (ENSMODG00000018906) #29 OAZ3 (ENSMODG00000018904) #30 MRPL9 (ENSMODG00000046753) #31 RIIAD1 (ENSMODG00000039252) #33 CELF3 (ENSMODG00000027673) #34 SNX27 (ENSMODG00000018893) #35 TUFT1 (ENSMODG00000047337) #36 ENSMODG00000018879 #37 POGZ (ENSMODG00000018875) PSMB4 (ENSMODG00000018871) SELENBP1 (ENSMODG00000018869) RFX5 (ENSMODG00000018866) Marsupialia_b ANCESTRAL SPECIES 1 ENSGT01100000263482.D ENSGT01100000263482.C.c.b.a.b.a.b ENSGT01100000263482.C.c.b.a.a ENSGT01100000263482.C.c.b.a.b.a.a ENSGT01100000263482.C.c.a.b ENSGT01100000263482.C.c.a.a ENSGT00390000016675 ENSGT00940000153818.a.b.a.b ENSGT00940000162465 #12 ENSGT00940000154467.b.b.a.a.b #14 ENSGT00940000154467.b.b.a.a.a.b #14 ENSGT00940000154467.a #16 ENSGT00940000163983 #17 ENSGT00940000162966 #18 ENSGT00940000154172 #21 ENSGT00940000154197 #22 ENSGT00940000161937 #25 ENSGT00940000163537 #26 ENSGT00940000161521 #27 ENSGT00940000162157 #28 ENSGT00940000159364 #29 ENSGT00940000161581 #30 ENSGT00390000008281 #31 ENSGT00390000003062 #33 ENSGT00940000154716 #34 ENSGT00950000183212.C #35 ENSGT00950000183065.B #36 ENSGT00940000162698 #37 ENSGT00940000160649 ENSGT00390000000698 ENSGT00390000014244 Tasmanian devil MODERN SPECIES 3 ENSSHAG00000027973 ENSSHAG00000021920 ENSSHAG00000024962 ENSSHAG00000007744 ENSSHAG00000005052 ENSSHAG00000022281 ENSSHAG00000024372 #12 ENSSHAG00000029525 #14 ENSSHAG00000026660 #14 ENSSHAG00000020734 #14 ENSSHAG00000021376 ENSSHAG00000016722 #16 ENSSHAG00000031502 #17 ENSSHAG00000016584 #18 S100A11 (ENSSHAG00000023473) #21 S100A10 (ENSSHAG00000023159) #22 C2CD4D (ENSSHAG00000016081) #26 RORC (ENSSHAG00000015984) #27 TDRKH (ENSSHAG00000015859) #29 LINGO4 (ENSSHAG00000022437) #28 OAZ3 (ENSSHAG00000015841) #30 MRPL9 (ENSSHAG00000026598) #31 ENSSHAG00000024960 #33 CELF3 (ENSSHAG00000015744) #34 SNX27 (ENSSHAG00000015572) #35 TUFT1 (ENSSHAG00000025042) #36 ENSSHAG00000015207 #37 POGZ (ENSSHAG00000014743) PSMB4 (ENSSHAG00000014719) SELENBP1 (ENSSHAG00000014447) RFX5 (ENSSHAG00000031331) Diprotodontia ANCESTRAL SPECIES 5 ENSGT00940000156438 ENSGT00390000007247 ENSGT01100000263482.D ENSGT01100000263482.C.c.b.a.b.a.b ENSGT01100000263482.C.c.b.a.a ENSGT01100000263482.C.c.b.a.b.a.a ENSGT01100000263482.C.c.a.b ENSGT01100000263482.C.c.a.a ENSGT00390000016675 ENSGT00940000153818.a.b.a.b ENSGT00940000162465 #12 ENSGT00940000154467.b.b.a.a.a.b #14 ENSGT00940000154467.a #16 ENSGT00940000163983 #17 ENSGT00940000154172 #21 ENSGT00940000154197 #22 ENSGT00940000161937 #25 ENSGT00940000163537 #26 ENSGT00940000161521 #27 ENSGT00940000162157 #28 ENSGT00940000159364 #29 ENSGT00940000161581 #30 ENSGT00390000008281 #31 ENSGT00390000003062 #33 ENSGT00940000154716 #34 ENSGT00950000183212.C #35 ENSGT00950000183065.B #36 ENSGT00940000162698 #37 ENSGT00940000160649 ENSGT00390000000698 ENSGT00390000014244 Wallaby DUPLICATION Wallaby DUPLICATION Wallaby MODERN SPECIES 13456 ENSMEUG00000010876 #22 Wallaby MODERN SPECIES 10934 ENSMEUG00000015676 #22 Wallaby MODERN SPECIES 10903 ENSMEUG00000011692 #22 Diprotodontia_a ANCESTRAL SPECIES 6 ENSGT00390000007247 ENSGT01100000263482.D ENSGT01100000263482.C.c.b.a.b.a.b ENSGT01100000263482.C.c.b.a.a ENSGT01100000263482.C.c.b.a.b.a.a ENSGT01100000263482.C.c.a.b ENSGT01100000263482.C.c.a.a ENSGT00970000198103 ENSGT00390000016675 ENSGT00940000153818.a.b.a.b ENSGT00940000162465 #12 ENSGT00940000154467.b.b.a.a.a.b #14 ENSGT00940000154467.a #16 ENSGT00940000163983 #17 ENSGT00940000154172.c #21 ENSGT00940000154197 #22 ENSGT00940000161937 #25 ENSGT00940000163537 #26 ENSGT00940000161521 #27 ENSGT00940000162157 #28 ENSGT00940000159364 #29 ENSGT00940000161581 #30 ENSGT00390000008281.g #31 ENSGT00390000003062 #33 ENSGT00940000154716 #34 ENSGT00950000183212.C #35 ENSGT00950000183065.B #36 ENSGT00940000162698 #37 ENSGT00940000160649 ENSGT00390000000698 ENSGT00390000014244 koala MODERN SPECIES 4 ENSPCIG00000003798 ENSPCIG00000003810 ENSPCIG00000026474 ENSPCIG00000026475 ENSPCIG00000026476 HEATR6 (ENSPCIG00000026477) HNF1B (ENSPCIG00000030619) ENSPCIG00000033989 ENSPCIG00000034047 ENSPCIG00000032403 ENSPCIG00000004253 #12 ENSPCIG00000005507 #14 ENSPCIG00000010063 ENSPCIG00000010780 #16 ENSPCIG00000033593 #21 S100A10 (ENSPCIG00000034404) #22 THEM5 (ENSPCIG00000021241) #25 C2CD4D (ENSPCIG00000021238) #26 RORC (ENSPCIG00000021210) #27 LINGO4 (ENSPCIG00000021207) #28 TDRKH (ENSPCIG00000021201) #29 OAZ3 (ENSPCIG00000021199) #30 ENSPCIG00000021194 #31 ENSPCIG00000037088 #33 CELF3 (ENSPCIG00000021190) #34 SNX27 (ENSPCIG00000021183) #35 TUFT1 (ENSPCIG00000021175) #36 ENSPCIG00000021171 #37 POGZ (ENSPCIG00000021163) PSMB4 (ENSPCIG00000021158) SELENBP1 (ENSPCIG00000021151) Common wonbat DUPLICATION Common wonbat MODERN SPECIES 1007 ENSVURG00010015955 ENSVURG00010015981 ENSVURG00010015996 ENSVURG00010016004 ENSVURG00010016008 ENSVURG00010016074 ENSVURG00010017226 ENSVURG00010017283 ENSVURG00010017302 ENSVURG00010017305 #12 ENSVURG00010017315 #14 ENSVURG00010017327 #16 ENSVURG00010017331 #17 ENSVURG00010017337 ENSVURG00010017345 #21 ENSVURG00010017350 #22 ENSVURG00010017382 #25 ENSVURG00010017391 #26 ENSVURG00010017396 #27 ENSVURG00010017408 #28 ENSVURG00010017411 #29 ENSVURG00010017418 #30 ENSVURG00010017427 #31 ENSVURG00010017437 #33 ENSVURG00010017456 #34 ENSVURG00010017588 #35 ENSVURG00010018681 #36 ENSVURG00010018703 #37 ENSVURG00010018723 ENSVURG00010018746 ENSVURG00010018755 Common wonbat MODERN SPECIES 1007 ENSVURG00010012622 ENSVURG00010012627 ENSVURG00010012645 ENSVURG00010012661 ENSVURG00010012668 ENSVURG00010012682 ENSVURG00010012701 ENSVURG00010012706 ENSVURG00010012788 ENSVURG00010013938 ENSVURG00010013966 ENSVURG00010013974 #14 ENSVURG00010013981 #16 ENSVURG00010013988 ENSVURG00010013992 #21 ENSVURG00010013994 #22 ENSVURG00010014002 #25 ENSVURG00010014005 #26 ENSVURG00010014012 #27 ENSVURG00010014033 #28 ENSVURG00010014037 #29 ENSVURG00010014057 #30 ENSVURG00010014084 #31 ENSVURG00010014095 #33 ENSVURG00010014109 #34 ENSVURG00010014141 #35 ENSVURG00010014178 #36 ENSVURG00010014229 #37 ENSVURG00010014273 ENSVURG00010014303 ENSVURG00010014312 Platypus MODERN SPECIES 88 S100A13 (ENSOANG00000002671) S100A14 (ENSOANG00000040312) S100A16 (ENSOANG00000038860) S100A3 (ENSOANG00000014146) S100A4 (ENSOANG00000014144) ENSOANG00000014143 ENSOANG00000050547 ENSOANG00000045920 ENSOANG00000013719 ENSOANG00000041567 ENSOANG00000050585 ENSOANG00000050037 ENSOANG00000043830 ENSOANG00000011573 #13 ENSOANG00000036352 S100A10 (ENSOANG00000009693) #22 ENSOANG00000050112 #23 ENSOANG00000020290 #25 RORC (ENSOANG00000004505) #27 TDRKH (ENSOANG00000001094) #29 ENSOANG00000036809 #30 MRPL9 (ENSOANG00000045585) #31 CELF3 (ENSOANG00000039914) #34 SNX27 (ENSOANG00000041578) #35 TUFT1 (ENSOANG00000011941) #36 CGN (ENSOANG00000048676) POGZ (ENSOANG00000042853) PSMB4 (ENSOANG00000001676) SELENBP1 (ENSOANG00000044421) ENSOANG00000038399 PI4KB (ENSOANG00000049990) Sauria ANCESTRAL SPECIES 28 ENSGT00940000161706 ENSGT00390000000920 ENSGT00940000161276.A ENSGT00940000161276.B ENSGT00940000163114 ENSGT00940000161959 ENSGT00940000161276.C ENSGT00940000161986 ENSGT00940000161896 ENSGT00940000162189 ENSGT00940000161006.k ENSGT01030000235377 ENSGT00940000162465 #12 ENSGT00940000154467 #13 ENSGT00940000154172 #21 ENSGT00940000154197 #22 ENSGT00940000160047 #23 ENSGT00940000163537 #26 ENSGT00940000161521 #27 ENSGT00940000154996.a.a ENSGT00940000165314 ENSGT00940000159364 #29 ENSGT00940000161581 #30 ENSGT00390000008281 #31 ENSGT00390000003062 #33 ENSGT00940000154716 #34 ENSGT00950000183212.C #35 ENSGT00950000183065.B #36 ENSGT00940000154489.B ENSGT00940000162698 #37 ENSGT00390000000698 Archelosauria ANCESTRAL SPECIES 27 ENSGT00940000154197 #22 ENSGT00940000160047 #23 ENSGT00940000163537 #26 ENSGT00940000161521 #27 ENSGT00940000154996.a.a ENSGT00940000165314 ENSGT00940000159364 #29 ENSGT00940000161581 #30 ENSGT00390000008281 #31 ENSGT00390000003062 #33 ENSGT00940000154716 #34 ENSGT00950000183212.C #35 ENSGT00950000183065.B #36 ENSGT00940000154489.B ENSGT00940000162698 #37 ENSGT00390000000698 Archosauria ANCESTRAL SPECIES 36 ENSGT00940000154197 #22 ENSGT00940000160047 #23 ENSGT00940000161521 #27 ENSGT00940000159364 #29 ENSGT00390000008281 #31 ENSGT00940000154716 #34 ENSGT00950000183212.C #35 ENSGT00950000183065.B #36 ENSGT00940000154489.B ENSGT00940000162698 #37 ENSGT00390000000698 ENSGT00940000160649 ENSGT00390000014244.jb.b ENSGT00390000014244.jb.a ENSGT01050000244970.a ENSGT00550000074892 Aves ANCESTRAL SPECIES 36 ENSGT00390000010993 ENSGT00950000182900.D ENSGT00390000000230 ENSGT00390000019377.a ENSGT00940000159936 ENSGT01080000257365.b.a.b.b ENSGT00990000203615.b.a.a.a.a ENSGT00940000159186 ENSGT00940000157083 ENSGT00940000161411 ENSGT00940000157535 ENSGT00390000009272.q ENSGT00550000075099 ENSGT00390000009272.r ENSGT00390000008714.a ENSGT00940000154197 #22 ENSGT00940000160047 #23 ENSGT00940000161521 #27 ENSGT00940000159364.q #29 ENSGT00390000008281 #31 ENSGT00940000154716 #34 ENSGT00950000183212.C #35 ENSGT00950000183065.B #36 ENSGT00940000154489.B ENSGT00940000162698 #37 ENSGT00390000000698 ENSGT00940000160649 ENSGT00390000014244.jb.b ENSGT00390000014244.jb.a.b ENSGT00390000014244.jb.a.a ENSGT01050000244970.a Neognathae ANCESTRAL SPECIES 36 ENSGT00950000182900.D ENSGT00390000000230 ENSGT00390000019377.a ENSGT00940000159936 ENSGT01080000257365.b.a.b.b ENSGT00990000203615.b.a.a.a.a ENSGT00940000159186 ENSGT00940000157083 ENSGT00940000161411 ENSGT00940000157535 ENSGT00960000190443 ENSGT00390000009272.q ENSGT00550000075099 ENSGT00390000009272.r ENSGT00390000008714.a ENSGT00940000154197 #22 ENSGT00940000160047 #23 ENSGT00940000161521 #27 ENSGT00940000159364.q #29 ENSGT00390000008281 #31 ENSGT00940000154716.g #34 ENSGT00950000183212.C #35 ENSGT00950000183065.B #36 ENSGT00940000154489.B ENSGT00940000162698 #37 ENSGT00390000000698 ENSGT00940000160649 ENSGT00390000014244.jb.b ENSGT00390000014244.jb.a.b ENSGT00390000014244.jb.a.a ENSGT01050000244970.a Neognathae_b ANCESTRAL SPECIES 34 ENSGT00950000182900.D ENSGT00390000000230 ENSGT00390000019377.a ENSGT00940000159936 ENSGT01080000257365.b.a.b.b ENSGT00990000203615.b.a.a.a.a ENSGT00940000159186 ENSGT00940000157083 ENSGT00940000161411 ENSGT00940000157535 ENSGT00960000190443 ENSGT00390000009272.q ENSGT00550000075099 ENSGT00390000009272.r ENSGT00390000008714.a ENSGT00940000154197 #22 ENSGT00940000160047 #23 ENSGT00940000161521 #27 ENSGT00940000159364.q #29 ENSGT00390000008281 #31 ENSGT00940000154716.g #34 ENSGT00950000183212.C #35 ENSGT00950000183065.B #36 ENSGT00940000162698 #37 ENSGT00390000000698 ENSGT00940000160649 ENSGT00390000014244.jb.b ENSGT00390000014244.jb.a.b ENSGT00390000014244.jb.a.a ENSGT01050000244970.a ENSGT00550000074892 Neognathae_c ANCESTRAL SPECIES 36 ENSGT00390000010993 ENSGT00950000182900.D ENSGT00390000000230 ENSGT00390000019377.a ENSGT00940000159936 ENSGT01080000257365.b.a.b.b ENSGT00990000203615.b.a.a.a.a ENSGT00940000159186 ENSGT00940000157083 ENSGT00940000161411 ENSGT00940000157535 ENSGT00960000190443 ENSGT00550000075099 ENSGT00390000009272.r ENSGT00390000008714.a ENSGT00940000154197 #22 ENSGT00940000160047 #23 ENSGT00940000161521 #27 ENSGT00940000159364.q #29 ENSGT00390000008281 #31 ENSGT00940000154716.g #34 ENSGT00950000183212.C #35 ENSGT00950000183065.B #36 ENSGT00940000162698 #37 ENSGT00390000000698 ENSGT00940000160649 ENSGT00390000014244.jb.b ENSGT00390000014244.jb.a.b ENSGT00390000014244.jb.a.a ENSGT01050000244970.a ENSGT00550000074892 Golden eagle MODERN SPECIES 25 CASQ1 (ENSACCG00020009508) ATP1A2 (ENSACCG00020009524) KCNJ9 (ENSACCG00020009545) ENSACCG00020009552 ENSACCG00020009562 F11R (ENSACCG00020009590) USF1 (ENSACCG00020009623) ARHGAP30 (ENSACCG00020009675) ENSACCG00020009701 NECTIN4 (ENSACCG00020009721) ENSACCG00020009736 ENSACCG00020009758 NIT1 (ENSACCG00020009774) PFDN2 (ENSACCG00020009785) DEDD (ENSACCG00020009795) S100A10 (ENSACCG00020009802) #22 THEM4 (ENSACCG00020009822) #23 RORC (ENSACCG00020009840) #27 TDRKH (ENSACCG00020000374) #29 MRPL9 (ENSACCG00020000392) #31 CELF3 (ENSACCG00020000428) #34 SNX27 (ENSACCG00020000468) #35 TUFT1 (ENSACCG00020000571) #36 ENSACCG00020000600 #37 PSMB4 (ENSACCG00020000658) POGZ (ENSACCG00020000714) ENSACCG00020000748 ENSACCG00020000783 ENSACCG00020000813 ENSACCG00020000840 ENSACCG00020000875 Kakapo MODERN SPECIES 60 ENSSHBG00005016426 ADAMTS4 (ENSSHBG00005016354) NDUFS2 (ENSSHBG00005014542) PEX19 (ENSSHBG00005014429) ENSSHBG00005014417 PEA15 (ENSSHBG00005014413) ATP1A2 (ENSSHBG00005014407) USF1 (ENSSHBG00005014400) ENSSHBG00005014390 NECTIN4 (ENSSHBG00005014366) ENSSHBG00005014352 ENSSHBG00005014335 PFDN2 (ENSSHBG00005014323) NIT1 (ENSSHBG00005014308) DEDD (ENSSHBG00005014297) S100A10 (ENSSHBG00005014284) #22 RORC (ENSSHBG00005014269) #27 TDRKH (ENSSHBG00005014249) #29 MRPL9 (ENSSHBG00005014238) #31 CELF3 (ENSSHBG00005014178) #34 SNX27 (ENSSHBG00005014147) #35 TUFT1 (ENSSHBG00005014124) #36 ENSSHBG00005014094 #37 PSMB4 (ENSSHBG00005014076) POGZ (ENSSHBG00005014068) ENSSHBG00005014053 ENSSHBG00005014039 ENSSHBG00005014021 ENSSHBG00005014003 ENSSHBG00005013982 RFX5 (ENSSHBG00005013966) Passeriformes ANCESTRAL SPECIES 51 ENSGT00390000010993 ENSGT00950000182900.D ENSGT00390000000230 ENSGT00940000159936 ENSGT01080000257365.b.a.b.b ENSGT00990000203615.b.a.a.a.a ENSGT00940000159186 ENSGT00940000157083 ENSGT00940000161411 ENSGT00940000157535 ENSGT00390000009272.q ENSGT00550000075099 ENSGT00390000008714.a ENSGT00940000154197 #22 ENSGT00940000160047 #23 ENSGT00390000008281 #31 ENSGT00940000154716.f.b #34 ENSGT00940000154716.f.a #34 ENSGT00950000183212.C #35 ENSGT00940000161521 #27 ENSGT00940000159364.q #29 ENSGT00940000154716.g #34 Passeriformes_d ANCESTRAL SPECIES 26 ENSGT00940000158886 ENSGT00730000111174.a ENSGT00390000010993 ENSGT00950000182900.D ENSGT00390000000230 ENSGT00940000159936 ENSGT01080000257365.b.a.b.b ENSGT00990000203615.b.a.a.a.a ENSGT00940000159186 ENSGT00940000157083 ENSGT00940000161411 ENSGT00940000157535 ENSGT00390000009272.q ENSGT00550000075099 ENSGT00390000008714.a ENSGT00940000154197 #22 ENSGT00940000160047 #23 ENSGT00940000161521 #27 ENSGT00940000159364.q.a.a #29 ENSGT00390000008281 #31 ENSGT00940000154716.f.b #34 ENSGT00940000154716.f.a #34 ENSGT00950000183212.C #35 ENSGT00390000002799 ENSGT00940000157203.f ENSGT00390000014273.b ENSGT00390000005869.a ENSGT00730000111185 ENSGT01100000263845 ENSGT00940000158522 ENSGT00950000186203 Passeriformes_g ANCESTRAL SPECIES 27 ENSGT00940000160444 ENSGT00940000158886 ENSGT00390000010993 ENSGT00950000182900.D ENSGT00390000000230 ENSGT00940000159936 ENSGT01080000257365.b.a.b.b ENSGT00990000203615.b.a.a.a.a ENSGT00940000159186 ENSGT00940000157083 ENSGT00940000161411 ENSGT00940000157535 ENSGT00390000009272.q ENSGT00550000075099.k ENSGT00390000008714.a ENSGT00940000154197 #22 ENSGT00940000160047 #23 ENSGT00940000159364.q.a.a #29 ENSGT00390000008281 #31 ENSGT00940000154716.f.b #34 ENSGT00940000154716.f.a #34 ENSGT00950000183212.C #35 ENSGT00390000002799 ENSGT00940000157203.f ENSGT00390000014273.b ENSGT00390000005869.a ENSGT00730000111185 ENSGT01100000263845 ENSGT00940000158522 ENSGT00950000186203 ENSGT00950000183112.b.b Passeroidea ANCESTRAL SPECIES 28 ENSGT00940000158886 ENSGT00390000010993 ENSGT00950000182900.D ENSGT00390000000230 ENSGT00940000159936 ENSGT01080000257365.b.a.b.b ENSGT00990000203615.b.a.a.a.a ENSGT00940000159186 ENSGT00940000157083 ENSGT00940000161411 ENSGT00940000157535 ENSGT00390000009272.q ENSGT00550000075099.k ENSGT00390000009272.r ENSGT00390000008714.a ENSGT00940000154197 #22 ENSGT00940000159364.q.a.a #29 ENSGT00390000008281 #31 ENSGT00940000154716.f.b #34 ENSGT00940000154716.f.a #34 ENSGT00950000183212.C #35 ENSGT00390000002799 ENSGT00940000157203.f ENSGT00390000014273.b ENSGT00390000005869.a ENSGT00730000111185 ENSGT01100000263845 ENSGT00940000158522 ENSGT00950000186203 ENSGT00950000183112.b.b ENSGT00510000048165 Common canary MODERN SPECIES 549 S100A10 (ENSSCAG00000001613) #22 Zebra finch MODERN SPECIES 18 PEX19 (ENSTGUG00000029746) ENSTGUG00000027613 PEA15 (ENSTGUG00000028006) ATP1A2 (ENSTGUG00000027873) KCNJ9 (ENSTGUG00000000586) KCNJ10 (ENSTGUG00000020285) F11R (ENSTGUG00000019634) USF1 (ENSTGUG00000019311) ARHGAP30 (ENSTGUG00000023219) ENSTGUG00000028866 ENSTGUG00000027626 ENSTGUG00000025300 ENSTGUG00000021807 ENSTGUG00000028568 ENSTGUG00000025716 ENSTGUG00000026768 #22 ENSTGUG00000022695 #29 ENSTGUG00000021225 #31 ENSTGUG00000024765 #34 ENSTGUG00000020684 #34 SNX27 (ENSTGUG00000004407) #35 ENSTGUG00000020469 ENSTGUG00000024270 ENSTGUG00000029351 ENSTGUG00000020246 DEDD (ENSTGUG00000027941) ENSTGUG00000029031 #29 ENSTGUG00000028574 #29 ENSTGUG00000023926 #34 ENSTGUG00000029221 #34 ENSTGUG00000023346 Medium ground finch MODERN SPECIES 525 ENSGFOG00000009860 ENSGFOG00000009850 ENSGFOG00000009839 #22 ENSGFOG00000009834 #23 Galloanserae ANCESTRAL SPECIES 36 ENSGT00390000009272.r ENSGT00550000075099 ENSGT00390000008714.a ENSGT00940000154197 #22 ENSGT00940000160047 #23 ENSGT00940000161521 #27 ENSGT00940000159364.q #29 ENSGT00390000008281 #31 ENSGT00940000154716.g #34 ENSGT00950000183212.C #35 ENSGT00950000183065.B #36 ENSGT00940000154489.B ENSGT00390000000698 ENSGT00940000160649 ENSGT00390000014244.jb.b ENSGT00390000014244.jb.a.b ENSGT00390000014244.jb.a.a ENSGT01050000244970.a ENSGT00550000074892 Phasianidae ANCESTRAL SPECIES 34 ENSGT00390000009272.r ENSGT00550000075099 ENSGT00390000008714.a ENSGT00940000154197 #22 ENSGT00940000160047 #23 ENSGT00940000161521.c #27 ENSGT00940000159364.q #29 ENSGT00390000008281 #31 ENSGT00940000154716.g #34 ENSGT00950000183212.C #35 ENSGT00950000183065.B #36 ENSGT00940000154489.B ENSGT00390000000698 ENSGT00940000160649 ENSGT00390000014244.jb.b ENSGT00390000014244.jb.a.b ENSGT00390000014244.jb.a.a ENSGT01050000244970.a ENSGT00550000074892 Japanese quail MODERN SPECIES 17 ENSCJPG00005000393 PFDN2 (ENSCJPG00005000365) NIT1 (ENSCJPG00005000360) DEDD (ENSCJPG00005000349) S100A10 (ENSCJPG00005000345) #22 THEM4 (ENSCJPG00005000342) #23 ENSCJPG00005000337 #27 TDRKH (ENSCJPG00005000333) #29 MRPL9 (ENSCJPG00005000319) #31 CELF3 (ENSCJPG00005000300) #34 SNX27 (ENSCJPG00005000271) #35 TUFT1 (ENSCJPG00005000119) #36 CGN (ENSCJPG00005000090) PSMB4 (ENSCJPG00005000058) POGZ (ENSCJPG00005015292) ENSCJPG00005015291 ENSCJPG00005015290 ENSCJPG00005015289 ENSCJPG00005015283 RFX5 (ENSCJPG00005015281) Phasianidae_b ANCESTRAL SPECIES 31 ENSGT00390000009272.r ENSGT00550000075099 ENSGT00390000008714.a ENSGT00940000154197 #22 ENSGT00940000160047 #23 ENSGT00940000161521.c #27 ENSGT00940000159364.q #29 ENSGT00390000008281 #31 ENSGT00940000154716.g #34 ENSGT00950000183212.C #35 ENSGT00950000183065.B #36 ENSGT00940000154489.B ENSGT00390000000698 ENSGT00940000160649 ENSGT00390000014244.jb.b ENSGT00390000014244.jb.a.b ENSGT00390000014244.jb.a.a ENSGT01050000244970.a ENSGT00550000074892 Chicken DUPLICATION Chicken MODERN SPECIES 17 ENSGALG00010028063 ENSGALG00010028858 ENSGALG00010028062 DEDD (ENSGALG00010028055) S100A10 (ENSGALG00010028048) #22 THEM4 (ENSGALG00010028047) #23 ENSGALG00010028041 #27 ENSGALG00010028040 #29 ENSGALG00010028038 #34 ENSGALG00010028035 PFDN2 (ENSGALG00010028030) ENSGALG00010028027 DEDD (ENSGALG00010028022) S100A10 (ENSGALG00010028017) #22 THEM4 (ENSGALG00010028014) #23 ENSGALG00010028006 #27 ENSGALG00010028004 #29 MRPL9 (ENSGALG00010028000) #31 ENSGALG00010027999 #34 SNX27 (ENSGALG00010027998) #35 Chicken MODERN SPECIES 17 ENSGALG00010028063 ENSGALG00010028858 ENSGALG00010028062 DEDD (ENSGALG00010028055) S100A10 (ENSGALG00010028048) #22 THEM4 (ENSGALG00010028047) #23 ENSGALG00010028041 #27 ENSGALG00010028040 #29 ENSGALG00010028038 #34 ENSGALG00010028035 PFDN2 (ENSGALG00010028030) ENSGALG00010028027 DEDD (ENSGALG00010028022) S100A10 (ENSGALG00010028017) #22 THEM4 (ENSGALG00010028014) #23 ENSGALG00010028006 #27 ENSGALG00010028004 #29 MRPL9 (ENSGALG00010028000) #31 ENSGALG00010027999 #34 SNX27 (ENSGALG00010027998) #35 TUFT1 (ENSGALG00010027994) #36 CGN (ENSGALG00010027986) PSMB4 (ENSGALG00010027985) POGZ (ENSGALG00010027983) SELENBP1 (ENSGALG00010027444) ENSGALG00010027418 ENSGALG00010028853 ENSGALG00010027407 RFX5 (ENSGALG00010027397) Turkey MODERN SPECIES 1093 RPS27 (ENSMGAG00000018096) NUP210L (ENSMGAG00000013101) ENSMGAG00000013097 C1orf43 (ENSMGAG00000013095) UBAP2L (ENSMGAG00000013090) AQP10 (ENSMGAG00000013088) ENSMGAG00000016861 PFDN2 (ENSMGAG00000013087) ENSMGAG00000021669 DEDD (ENSMGAG00000013079) ENSMGAG00000013077 #22 African ostrich MODERN SPECIES 128 NDUFS2 (ENSSCUG00000001504) ENSSCUG00000001513 ENSSCUG00000001518 PEA15 (ENSSCUG00000001522) CASQ1 (ENSSCUG00000001531) ATP1A2 (ENSSCUG00000001550) KCNJ9 (ENSSCUG00000001591) KCNJ10 (ENSSCUG00000001593) F11R (ENSSCUG00000001595) USF1 (ENSSCUG00000001600) NECTIN4 (ENSSCUG00000001605) ENSSCUG00000001607 ENSSCUG00000001608 NIT1 (ENSSCUG00000001609) DEDD (ENSSCUG00000001610) S100A10 (ENSSCUG00000001612) #22 THEM4 (ENSSCUG00000001616) #23 TDRKH (ENSSCUG00000001620) #29 MRPL9 (ENSSCUG00000001621) #31 SNX27 (ENSSCUG00000001623) #35 TUFT1 (ENSSCUG00000001627) #36 ENSSCUG00000001628 CGN (ENSSCUG00000001630) PSMB4 (ENSSCUG00000001632) POGZ (ENSSCUG00000001634) ENSSCUG00000001638 ENSSCUG00000001640 ENSSCUG00000001642 RFX5 (ENSSCUG00000001645) PI4KB (ENSSCUG00000001646) ZNF687 (ENSSCUG00000001647) Australian saltwater crocodile MODERN SPECIES 25 ENSCPRG00005003513 ENSCPRG00005003520 ASH1L (ENSCPRG00005003539) DAP3 (ENSCPRG00005003641) MSTO1 (ENSCPRG00005003685) ENSCPRG00005003828 SYT11 (ENSCPRG00005004624) RIT1 (ENSCPRG00005004646) KHDC4 (ENSCPRG00005004670) ENSCPRG00005004829 ENSCPRG00005004833 CERS2 (ENSCPRG00005004837) MINDY1 (ENSCPRG00005004850) PRUNE1 (ENSCPRG00005004862) ENSCPRG00005004871 S100A10 (ENSCPRG00005004877) #22 THEM4 (ENSCPRG00005004889) #23 CTSK (ENSCPRG00005004905) ARNT (ENSCPRG00005005374) SETDB1 (ENSCPRG00005007301) ENSCPRG00005007482 ENSCPRG00005007485 GABPB2 (ENSCPRG00005007492) ENSCPRG00005007502 SEMA6C (ENSCPRG00005007512) ENSCPRG00005007522 TNFAIP8L2 (ENSCPRG00005007532) LYSMD1 (ENSCPRG00005007534) SCNM1 (ENSCPRG00005007538) TMOD4 (ENSCPRG00005007544) VPS72 (ENSCPRG00005007553) Cryptodira ANCESTRAL SPECIES 20 ENSGT00950000183103.d.a.a ENSGT00390000007153.a.b ENSGT00390000018130.a.a.a ENSGT00940000155176 ENSGT00940000157759 ENSGT00940000157585 ENSGT01040000240780 ENSGT00940000157471 ENSGT01030000234515.a.b.a.a ENSGT00940000161835 ENSGT00390000016607.b ENSGT00450000040262 ENSGT00940000161723 ENSGT00940000160112 ENSGT00390000009895 ENSGT00940000154197 #22 ENSGT00940000160047 #23 ENSGT00940000163537 #26 ENSGT00940000161521 #27 ENSGT00940000154996.a.a ENSGT00940000165314 ENSGT00940000159364 #29 ENSGT00940000161581 #30 ENSGT00390000008281 #31 ENSGT00390000003062 #33 ENSGT00940000154716 #34 ENSGT00950000183212.C #35 ENSGT00950000183065.B #36 ENSGT00940000154489.B ENSGT00940000162698 #37 ENSGT00390000000698 Testudinoidea ANCESTRAL SPECIES 17 ENSGT00390000018130.a.a.a ENSGT00940000155176.l ENSGT00940000155176.k.a.a ENSGT00940000157759 ENSGT00940000157585 ENSGT01040000240780 ENSGT00940000157471 ENSGT01030000234515.a.b.a.a ENSGT00940000161835 ENSGT00390000016607.b ENSGT00450000040262 ENSGT00940000161723 ENSGT00940000160112 ENSGT00390000009895 ENSGT01030000234540.B.a.a.c.a ENSGT00940000154197 #22 ENSGT00940000160047 #23 ENSGT00940000163537 #26 ENSGT00940000161521 #27 ENSGT00940000154996.a.a ENSGT00940000165314 ENSGT00940000159364 #29 ENSGT00940000161581 #30 ENSGT00390000008281 #31 ENSGT00390000003062 #33 ENSGT00940000154716 #34 ENSGT00950000183212.C #35 ENSGT00950000183065.B #36 ENSGT00940000154489.B ENSGT00940000162698 #37 ENSGT00390000000698 Emydidae ANCESTRAL SPECIES 18 ENSGT00390000018130.a.a.a ENSGT00940000155176.l ENSGT00940000155176.k.a.a ENSGT00940000157759 ENSGT00940000157585 ENSGT01040000240780 ENSGT00940000157471 ENSGT01030000234515.a.b.a.a ENSGT00940000161835 ENSGT00390000016607.b ENSGT00450000040262 ENSGT00940000161723 ENSGT00940000160112 ENSGT00390000009895 ENSGT01030000234540.B.a.a.c.a ENSGT00940000154197 #22 ENSGT00940000160047 #23 ENSGT00940000163537 #26 ENSGT00940000161521 #27 ENSGT00940000154996.a.a ENSGT00940000165314 ENSGT00940000159364 #29 ENSGT00940000161581 #30 ENSGT00390000008281 #31 ENSGT00390000003062 #33 ENSGT00940000154716 #34 ENSGT00950000183212.C #35 ENSGT00950000183065.B #36 ENSGT00940000154489.B ENSGT00390000000698 ENSGT00940000160649 Three-toed box turtle MODERN SPECIES 102 GOLPH3L (ENSTMTG00000007124) ENSTMTG00000007143 ENSTMTG00000007160 CTSK (ENSTMTG00000007192) ARNT (ENSTMTG00000007214) ENSTMTG00000007315 SETDB1 (ENSTMTG00000007340) CERS2 (ENSTMTG00000007401) ANXA9 (ENSTMTG00000007428) MINDY1 (ENSTMTG00000007470) PRUNE1 (ENSTMTG00000007499) BNIPL (ENSTMTG00000007525) CDC42SE1 (ENSTMTG00000007541) MLLT11 (ENSTMTG00000007551) ENSTMTG00000007558 S100A10 (ENSTMTG00000007571) #22 THEM4 (ENSTMTG00000007589) #23 C2CD4D (ENSTMTG00000007644) #26 RORC (ENSTMTG00000007685) #27 ENSTMTG00000007700 ENSTMTG00000007710 TDRKH (ENSTMTG00000007731) #29 OAZ3 (ENSTMTG00000007792) #30 MRPL9 (ENSTMTG00000007832) #31 ENSTMTG00000007914 ENSTMTG00000007923 #34 SNX27 (ENSTMTG00000007943) #35 TUFT1 (ENSTMTG00000008004) #36 CGN (ENSTMTG00000008070) PSMB4 (ENSTMTG00000008097) POGZ (ENSTMTG00000008117) painted turtle MODERN SPECIES 738 GOLPH3L (ENSCPBG00000008616) HORMAD1 (ENSCPBG00000008626) ENSCPBG00000008637 ENSCPBG00000008648 CTSK (ENSCPBG00000008661) ARNT (ENSCPBG00000008682) ENSCPBG00000008707 SETDB1 (ENSCPBG00000008716) CERS2 (ENSCPBG00000008726) ANXA9 (ENSCPBG00000008736) MINDY1 (ENSCPBG00000008750) PRUNE1 (ENSCPBG00000008763) BNIPL (ENSCPBG00000008771) CDC42SE1 (ENSCPBG00000008784) MLLT11 (ENSCPBG00000008788) S100A10 (ENSCPBG00000008792) #22 THEM4 (ENSCPBG00000008796) #23 C2CD4D (ENSCPBG00000008801) #26 RORC (ENSCPBG00000008805) #27 ENSCPBG00000008812 ENSCPBG00000008815 TDRKH (ENSCPBG00000008824) #29 OAZ3 (ENSCPBG00000008836) #30 MRPL9 (ENSCPBG00000008844) #31 RIIAD1 (ENSCPBG00000008853) #33 CELF3 (ENSCPBG00000008870) #34 SNX27 (ENSCPBG00000008905) #35 TUFT1 (ENSCPBG00000008907) #36 CGN (ENSCPBG00000008913) PSMB4 (ENSCPBG00000008915) POGZ (ENSCPBG00000008917) Testudinidae ANCESTRAL SPECIES 3 ENSGT00390000018130.a.a.a ENSGT00940000155176.l ENSGT00940000155176.k.a.a ENSGT00940000157759 ENSGT00940000157585 ENSGT01040000240780 ENSGT00940000157471 ENSGT01030000234515.a.b.a.a ENSGT00940000161835 ENSGT00390000016607.b ENSGT00450000040262 ENSGT00940000161723 ENSGT00940000160112 ENSGT00390000009895 ENSGT01030000234540.B.a.a.c.a ENSGT00940000154197 #22 ENSGT00940000160047 #23 ENSGT00940000163537 #26 ENSGT00940000161521 #27 ENSGT00940000154996.a.a ENSGT00940000158358.f ENSGT00940000159364 #29 ENSGT00940000161581 #30 ENSGT00390000008281 #31 ENSGT01100000266092 ENSGT00940000154716 #34 ENSGT00950000183212.C #35 ENSGT00950000183065.B #36 ENSGT00940000162698 #37 ENSGT00390000000698 ENSGT00940000160649 Goode s thornscrub tortoise MODERN SPECIES 16 ENSGEVG00005016267 ENSGEVG00005016308 CTSS (ENSGEVG00005016424) CTSK (ENSGEVG00005016496) ARNT (ENSGEVG00005016585) ENSGEVG00005016666 SETDB1 (ENSGEVG00005016733) CERS2 (ENSGEVG00005016787) ANXA9 (ENSGEVG00005016835) MINDY1 (ENSGEVG00005016943) PRUNE1 (ENSGEVG00005016967) BNIPL (ENSGEVG00005017095) CDC42SE1 (ENSGEVG00005017444) MLLT11 (ENSGEVG00005017456) ENSGEVG00005017489 S100A10 (ENSGEVG00005017611) #22 THEM4 (ENSGEVG00005017627) #23 C2CD4D (ENSGEVG00005017642) #26 RORC (ENSGEVG00005017752) #27 ENSGEVG00005018375 TDRKH (ENSGEVG00005018412) #29 OAZ3 (ENSGEVG00005018446) #30 MRPL9 (ENSGEVG00005018482) #31 ENSGEVG00005018495 CELF3 (ENSGEVG00005018512) #34 SNX27 (ENSGEVG00005018570) #35 TUFT1 (ENSGEVG00005018632) #36 ENSGEVG00005018707 #37 PSMB4 (ENSGEVG00005018880) POGZ (ENSGEVG00005018900) ENSGEVG00005018932 Abingdon island giant tortoise MODERN SPECIES 2613 ENSCABG00000006975 ENSCABG00000006978 ENSCABG00000006981 CTSK (ENSCABG00000006984) ARNT (ENSCABG00000007049) ENSCABG00000008222 SETDB1 (ENSCABG00000008224) CERS2 (ENSCABG00000008225) ANXA9 (ENSCABG00000008227) MINDY1 (ENSCABG00000008231) PRUNE1 (ENSCABG00000008232) BNIPL (ENSCABG00000008371) CDC42SE1 (ENSCABG00000008376) MLLT11 (ENSCABG00000008380) ENSCABG00000008386 S100A10 (ENSCABG00000008407) #22 THEM4 (ENSCABG00000008409) #23 C2CD4D (ENSCABG00000008410) #26 RORC (ENSCABG00000008413) #27 ENSCABG00000008763 ENSCABG00000008764 TDRKH (ENSCABG00000008766) #29 OAZ3 (ENSCABG00000008770) #30 MRPL9 (ENSCABG00000008778) #31 ENSCABG00000008884 CELF3 (ENSCABG00000008885) #34 SNX27 (ENSCABG00000008888) #35 TUFT1 (ENSCABG00000009119) #36 ENSCABG00000009129 #37 PSMB4 (ENSCABG00000009137) POGZ (ENSCABG00000009140) Chinese turtle MODERN SPECIES 779 ENSPSIG00000010636 ENSPSIG00000010540 KIRREL1 (ENSPSIG00000010539) ENSPSIG00000000613 MINDY1 (ENSPSIG00000010183) PRUNE1 (ENSPSIG00000010153) BNIPL (ENSPSIG00000009841) ENSPSIG00000000604 MLLT11 (ENSPSIG00000009837) ENSPSIG00000009833 S100A10 (ENSPSIG00000009746) #22 ENSPSIG00000009724 THEM4 (ENSPSIG00000009620) #23 C2CD4D (ENSPSIG00000000600) #26 RORC (ENSPSIG00000008995) #27 ENSPSIG00000008807 ENSPSIG00000008797 TDRKH (ENSPSIG00000008541) #29 OAZ3 (ENSPSIG00000007970) #30 MRPL9 (ENSPSIG00000007207) #31 RIIAD1 (ENSPSIG00000007178) #33 ENSPSIG00000007119 ENSPSIG00000007110 #34 SNX27 (ENSPSIG00000006075) #35 PIAS3 (ENSPSIG00000005069) POLR3C (ENSPSIG00000004694) Lepidosauria ANCESTRAL SPECIES 36 ENSGT00940000162189 ENSGT00940000161006.k ENSGT01030000235377 ENSGT00940000154467 #13 ENSGT00940000154172 #21 ENSGT00940000154197 #22 ENSGT00940000160047 #23 ENSGT00940000163537 #26 ENSGT00940000161521 #27 ENSGT00940000154996.a.a ENSGT00940000165314 ENSGT00940000159364 #29 ENSGT00940000161581 #30 ENSGT00390000008281 #31 ENSGT00390000003062 #33 ENSGT00940000154716 #34 ENSGT00950000183212.C #35 ENSGT00950000183065.B #36 ENSGT00940000162698 #37 ENSGT00390000000698 ENSGT00940000160649 tuatara MODERN SPECIES 157 S100A11 (ENSSPUG00000002323) #21 S100A10 (ENSSPUG00000002332) #22 THEM4 (ENSSPUG00000002336) #23 C2CD4D (ENSSPUG00000002349) #26 RORC (ENSSPUG00000002357) #27 TDRKH (ENSSPUG00000002369) #29 ENSSPUG00000002417 OAZ3 (ENSSPUG00000002425) #30 MRPL9 (ENSSPUG00000002439) #31 CELF3 (ENSSPUG00000002462) #34 SNX27 (ENSSPUG00000002477) #35 TUFT1 (ENSSPUG00000002499) #36 ENSSPUG00000002546 #37 PSMB4 (ENSSPUG00000002593) POGZ (ENSSPUG00000002680) ENSSPUG00000002696 ENSSPUG00000002704 Episquamata ANCESTRAL SPECIES 17 ENSGT00390000002869 ENSGT00940000164585.d ENSGT00390000008274 ENSGT00940000154879 ENSGT00940000156223 ENSGT00390000014184 ENSGT00940000161073 ENSGT00390000004097.b ENSGT00940000160472 ENSGT00940000162189 ENSGT00940000161006.k ENSGT01030000235377 ENSGT00960000189968 ENSGT00940000154467 #13 ENSGT00940000154172 #21 ENSGT00940000154197 #22 ENSGT00940000160047.i #23 ENSGT00940000160047.j #23 ENSGT00940000163537 #26 ENSGT00940000161521 #27 ENSGT00940000154996.a.a ENSGT00940000165314 ENSGT00940000159364 #29 ENSGT00940000161581 #30 ENSGT00390000008281 #31 ENSGT00390000003062 #33 ENSGT00940000154716 #34 ENSGT00940000154617.B.u ENSGT00950000183212.C #35 ENSGT00950000183065.B #36 ENSGT00940000162698 #37 Toxicofera ANCESTRAL SPECIES 27 ENSGT00940000161854 ENSGT00940000160475 ENSGT00390000002869 ENSGT00390000008274 ENSGT00940000154879 ENSGT00940000156223 ENSGT00390000014184 ENSGT00390000004097.b ENSGT00940000160472 ENSGT00940000162189 ENSGT00940000161006.k ENSGT01030000235377 ENSGT00960000189968 ENSGT00940000154467 #13 ENSGT00940000154172 #21 ENSGT00940000154197 #22 ENSGT00940000160047.i #23 ENSGT00940000160047.j #23 ENSGT00940000163537 #26 ENSGT00940000161521 #27 ENSGT00940000154996.a.a ENSGT00940000159364 #29 ENSGT00940000161581 #30 ENSGT00390000008281 #31 ENSGT00390000003062 #33 ENSGT00940000154716 #34 ENSGT00940000154617.B.u ENSGT00950000183212.C #35 ENSGT00950000183065.B #36 ENSGT00940000154489.B ENSGT00940000162698 #37 Elapidae ANCESTRAL SPECIES 25 ENSGT00940000161706 ENSGT00940000161854 ENSGT00940000160475 ENSGT00390000002869 ENSGT00390000008274 ENSGT00940000154879 ENSGT00940000156223 ENSGT00390000014184 ENSGT00390000004097.b ENSGT00940000160472 ENSGT00940000162189 ENSGT00940000161006.k ENSGT00960000189968 ENSGT00940000154467 #13 ENSGT00940000154172 #21 ENSGT00940000154197 #22 ENSGT00940000160047.i #23 ENSGT00940000160047.j #23 ENSGT00940000163537 #26 ENSGT00940000161521 #27 ENSGT00940000154996.a.a ENSGT00940000159364 #29 ENSGT00940000161581 #30 ENSGT00390000008281 #31 ENSGT00390000003062 #33 ENSGT00940000154716 #34 ENSGT00940000154617.B.u ENSGT00950000183212.C #35 ENSGT00950000183065.B #36 ENSGT00940000154489.B ENSGT00940000162698 #37 Indian cobra DUPLICATION Indian cobra MODERN SPECIES 17 ENSNNAG00000012135 ENSNNAG00000012168 ENSNNAG00000012359 ENSNNAG00000012377 ENSNNAG00000012395 ENSNNAG00000012401 ENSNNAG00000012422 ENSNNAG00000012447 ENSNNAG00000012460 ENSNNAG00000012470 ENSNNAG00000012491 ENSNNAG00000012524 ENSNNAG00000003850 ENSNNAG00000003859 #13 S100A11 (ENSNNAG00000003879) #21 ENSNNAG00000003893 #22 ENSNNAG00000003911 #23 ENSNNAG00000003946 #23 C2CD4D (ENSNNAG00000004058) #26 RORC (ENSNNAG00000004096) #27 ENSNNAG00000004197 TDRKH (ENSNNAG00000004216) #29 OAZ3 (ENSNNAG00000004267) #30 MRPL9 (ENSNNAG00000004325) #31 RIIAD1 (ENSNNAG00000004416) #33 CELF3 (ENSNNAG00000004439) #34 ENSNNAG00000004501 SNX27 (ENSNNAG00000004563) #35 TUFT1 (ENSNNAG00000004687) #36 ENSNNAG00000004711 #37 ENSNNAG00000004809 Indian cobra MODERN SPECIES 5 ENSNNAG00000010085 ENSNNAG00000010062 PDK3 (ENSNNAG00000009991) PCYT1B (ENSNNAG00000009938) POLA1 (ENSNNAG00000009788) ARX (ENSNNAG00000009752) ENSNNAG00000009738 ENSNNAG00000009666 ENSNNAG00000009638 ENSNNAG00000009582 ENSNNAG00000009564 NR0B1 (ENSNNAG00000009547) TASL (ENSNNAG00000009531) ENSNNAG00000009438 TAB3 (ENSNNAG00000009413) ENSNNAG00000009357 #22 ENSNNAG00000009341 ENSNNAG00000009073 ENSNNAG00000009031 ENSNNAG00000008951 TMEM47 (ENSNNAG00000008923) ENSNNAG00000008910 Elapidae_a ANCESTRAL SPECIES 198 ENSGT01040000242094.b ENSGT00940000154172 #21 ENSGT00940000154197 #22 ENSGT00940000160047.i #23 ENSGT00940000160047.j #23 Acanthophiinae DUPLICATION Acanthophiinae ANCESTRAL SPECIES ENSGT00940000154197.k #22 Mainland tiger snake DUPLICATION Mainland tiger snake MODERN SPECIES 2008 ENSNSUG00000001614 #22 Mainland tiger snake MODERN SPECIES 2013 ENSNSUG00000001625 #22 Eastern brown snake DUPLICATION Eastern brown snake MODERN SPECIES 1035 ENSPTXG00000016148 #22 Eastern brown snake MODERN SPECIES 1036 ENSPTXG00000016996 #22 Acanthophiinae ANCESTRAL SPECIES 165 ENSGT01090000260076.b.b ENSGT00390000015719.d ENSGT00390000011425.B ENSGT01000000214434.B.b ENSGT00940000159499 ENSGT00940000154342.C.g.a.m.a.b ENSGT00940000154197.l #22 ENSGT00990000208665.B Mainland tiger snake MODERN SPECIES 132 ENSNSUG00000012365 IL1RAPL1 (ENSNSUG00000012364) ENSNSUG00000012363 NR0B1 (ENSNSUG00000012362) ENSNSUG00000012361 TASL (ENSNSUG00000012360) ENSNSUG00000012359 ENSNSUG00000012335 TAB3 (ENSNSUG00000012334) ENSNSUG00000012333 ENSNSUG00000011968 ENSNSUG00000011967 #22 ENSNSUG00000011966 ENSNSUG00000011965 ENSNSUG00000011962 ENSNSUG00000011961 ENSNSUG00000011960 ENSNSUG00000011959 ENSNSUG00000011958 ENSNSUG00000011956 TMEM47 (ENSNSUG00000011955) Eastern brown snake MODERN SPECIES 82 ENSPTXG00000012261 IL1RAPL1 (ENSPTXG00000012259) NR0B1 (ENSPTXG00000012258) ENSPTXG00000012257 TASL (ENSPTXG00000012256) ENSPTXG00000012255 TAB3 (ENSPTXG00000012254) ENSPTXG00000012253 #22 ENSPTXG00000012252 ENSPTXG00000012251 DMD (ENSPTXG00000011609) ENSPTXG00000018614 ENSPTXG00000018613 TMEM47 (ENSPTXG00000018612) Blue-lipped sea krait MODERN SPECIES 2512 ENSLLTG00000017812 ENSLLTG00000017814 #13 ENSLLTG00000017816 ENSLLTG00000017817 S100A11 (ENSLLTG00000017820) #21 S100A10 (ENSLLTG00000017822) #22 ENSLLTG00000017824 #23 ENSLLTG00000017826 #23 Lizard MODERN SPECIES 1623 S100A11 (ENSACAG00000000617) #21 S100A10 (ENSACAG00000000615) #22 C2CD4D (ENSACAG00000000587) #26 Laterata ANCESTRAL SPECIES 35 ENSGT00960000192881 ENSGT00960000189968 ENSGT00940000154467 #13 ENSGT01040000242094 ENSGT00940000154172 #21 ENSGT00940000154197 #22 ENSGT00940000160047.i #23 ENSGT00940000163537 #26 ENSGT00940000161521 #27 ENSGT00940000154996.a.a ENSGT00940000165314 ENSGT00940000159364 #29 ENSGT00940000161581 #30 ENSGT00390000008281 #31 ENSGT00390000003062 #33 ENSGT00940000154716 #34 ENSGT00940000154617.B.u ENSGT00950000183212.C #35 ENSGT00950000183065.B #36 ENSGT00940000162698 #37 ENSGT00390000000698 Common wall lizard DUPLICATION Common wall lizard MODERN SPECIES 7 ENSPMRG00000020517 ENSPMRG00000020526 ENSPMRG00000020534 ENSPMRG00000020544 ENSPMRG00000020562 ENSPMRG00000020588 ENSPMRG00000020594 ENSPMRG00000020607 ENSPMRG00000020613 ENSPMRG00000020616 ENSPMRG00000020621 ENSPMRG00000020628 ENSPMRG00000020633 ENSPMRG00000020638 #21 ENSPMRG00000020646 #21 ENSPMRG00000020653 #22 ENSPMRG00000020661 THEM4 (ENSPMRG00000020666) #23 C2CD4D (ENSPMRG00000020673) #26 RORC (ENSPMRG00000020678) #27 ENSPMRG00000020687 ENSPMRG00000020691 TDRKH (ENSPMRG00000020701) #29 OAZ3 (ENSPMRG00000020704) #30 MRPL9 (ENSPMRG00000020716) #31 ENSPMRG00000020722 #34 SNX27 (ENSPMRG00000020729) #35 ENSPMRG00000020739 TUFT1 (ENSPMRG00000020754) #36 ENSPMRG00000020794 #37 PSMB4 (ENSPMRG00000020817) Common wall lizard MODERN SPECIES 419 ENSPMRG00000023596 HS6ST2 (ENSPMRG00000023593) ENSPMRG00000023591 ENSPMRG00000023590 ENSPMRG00000023588 ENSPMRG00000023585 ENSPMRG00000023584 ENSPMRG00000023581 ENSPMRG00000023580 RAP2C (ENSPMRG00000023579) FRMD7 (ENSPMRG00000023577) STK26 (ENSPMRG00000023575) ENSPMRG00000023574 ENSPMRG00000023573 ENSPMRG00000023571 ENSPMRG00000023570 #22 DOCK11 (ENSPMRG00000023561) WDR44 (ENSPMRG00000023553) ENSPMRG00000023552 ENSPMRG00000023550 ENSPMRG00000023549 ENSPMRG00000023546 ENSPMRG00000023543 AGTR2 (ENSPMRG00000023542) ENSPMRG00000023540 ENSPMRG00000023538 PLS3 (ENSPMRG00000023534) ENSPMRG00000023530 ENSPMRG00000023528 LRCH2 (ENSPMRG00000023513) HTR2C (ENSPMRG00000023510) Argentine black and white tegu MODERN SPECIES 80 ENSSMRG00000000275 S100A12 (ENSSMRG00000000235) ENSSMRG00000000223 PGLYRP3 (ENSSMRG00000000188) ENSSMRG00000000144 ENSSMRG00000000136 ENSSMRG00000000129 ENSSMRG00000000125 ENSSMRG00000000087 ENSSMRG00000000067 ENSSMRG00000000053 ENSSMRG00000000042 ENSSMRG00000021443 #13 ENSSMRG00000021442 S100A11 (ENSSMRG00000021441) #21 S100A10 (ENSSMRG00000021440) #22 ENSSMRG00000021439 #23 ENSSMRG00000021438 #23 ENSSMRG00000021437 C2CD4D (ENSSMRG00000021436) #26 RORC (ENSSMRG00000021277) #27 ENSSMRG00000021276 ENSSMRG00000021275 #29 MRPL9 (ENSSMRG00000021274) #31 RIIAD1 (ENSSMRG00000021273) #33 CELF3 (ENSSMRG00000021272) #34 ENSSMRG00000021271 SNX27 (ENSSMRG00000021270) #35 ENSSMRG00000021269 ENSSMRG00000021268 TUFT1 (ENSSMRG00000021267) #36 Anura ANCESTRAL SPECIES 55 ENSGT00940000157062 ENSGT00390000010652.B ENSGT00940000160472 ENSGT00390000004097.b ENSGT00940000161073 ENSGT00390000014184 ENSGT00940000165154 ENSGT00940000154879 ENSGT00390000008274 ENSGT00940000164585.d ENSGT00390000002869 ENSGT00940000160475 ENSGT00390000000920 ENSGT01090000262497 ENSGT00940000165795 ENSGT00940000154197 #22 ENSGT00940000160047 #23 ENSGT00940000162206.b ENSGT00940000161521 #27 ENSGT00940000156665 ENSGT00390000005644 ENSGT01050000244898.a.a.a.b.c ENSGT00940000165347 ENSGT00940000158840 ENSGT00390000007109 ENSGT00940000161278 ENSGT00550000074944 ENSGT00390000017010 ENSGT00940000156823.e ENSGT00940000160640 ENSGT00940000163078 Frog MODERN SPECIES 8 ENSXETG00000047387 s100a1 (ENSXETG00000038863) S100A16 (ENSXETG00000044368) ENSXETG00000039898 ENSXETG00000040014 ENSXETG00000048034 ENSXETG00000037735 ENSXETG00000048374 ENSXETG00000005151 ENSXETG00000043564 ENSXETG00000034025 ENSXETG00000042182 ENSXETG00000044572 ENSXETG00000008258 s100a11 (ENSXETG00000008324) s100a10 (ENSXETG00000043586) #22 THEM4 (ENSXETG00000036041) #23 ENSXETG00000047086 ENSXETG00000046875 rorc (ENSXETG00000002131) #27 lingo4 (ENSXETG00000002132) creb3l4 (ENSXETG00000002133) ENSXETG00000043571 ENSXETG00000045205 JTB (ENSXETG00000047205) rab13 (ENSXETG00000020729) rps27 (ENSXETG00000046108) tpm3 (ENSXETG00000020732) cfap141 (ENSXETG00000038540) c1orf43 (ENSXETG00000020733) ubap2l (ENSXETG00000015342) Leishan spiny toad MODERN SPECIES 4 SLC27A3 (ENSLLEG00000025697) INTS3 (ENSLLEG00000024391) ENSLLEG00000020721 ENSLLEG00000020526 ILF2 (ENSLLEG00000020373) CHTOP (ENSLLEG00000020284) ENSLLEG00000020018 S100A1 (ENSLLEG00000019973) ENSLLEG00000019935 S100A16 (ENSLLEG00000019889) ENSLLEG00000019862 ENSLLEG00000019820 ENSLLEG00000019725 ENSLLEG00000019538 ENSLLEG00000019616 S100A10 (ENSLLEG00000019482) #22 ENSLLEG00000019451 ENSLLEG00000018701 #23 ENSLLEG00000018584 RORC (ENSLLEG00000018508) #27 ENSLLEG00000018436 CREB3L4 (ENSLLEG00000018309) ENSLLEG00000018263 ENSLLEG00000018201 ENSLLEG00000017793 ENSLLEG00000017082 USP21 (ENSLLEG00000017287) B4GALT3 (ENSLLEG00000016905) PPOX (ENSLLEG00000016330) ENSLLEG00000016146 ENSLLEG00000016119