Euarchontoglires_A ANCESTRAL SPECIES ENSGT00730000111554 ENSGT00730000111580 ENSGT00940000161842.b ENSGT00940000163498 ENSGT00940000163905 ENSGT00940000161842.a ENSGT00940000162465 ENSGT00940000154467.b.b.b ##20 ENSGT00940000154467.b.b.a ##20 ENSGT00940000170498 ENSGT00940000154467.b.a ##20 ENSGT00940000154467.a #20 ENSGT00940000163983 ENSGT00940000162966 ENSGT00940000154172 #21 ENSGT00940000154197.b.b #22 ENSGT00940000160047 #23 ENSGT00940000161937 #24 ENSGT00940000163537 #25 ENSGT00940000161521 #26 ENSGT00940000162157 #27 ENSGT00940000159364 #28 ENSGT00940000161581 #29 ENSGT00390000008281 #30 ENSGT00390000003062 #31 ENSGT00940000154716 #32 ENSGT00950000183212.C #33 ENSGT00950000183065.B #34 ENSGT00940000162698 #35 ENSGT00940000160649 #36 ENSGT00390000000698 #37 Glires ANCESTRAL SPECIES ENSGT00730000111554 ENSGT00730000111580 ENSGT00940000161842.b ENSGT00940000163498 ENSGT00940000163905 ENSGT00940000161842.a ENSGT00940000162465 ENSGT00940000154467.b.b.b ##20 ENSGT00940000154467.b.b.a ##20 ENSGT00940000170498 ENSGT00940000154467.b.a ##20 ENSGT00940000154467.a #20 ENSGT00940000163983 ENSGT00940000162966 ENSGT00940000154172 #21 ENSGT00940000154197.b.b #22 ENSGT00940000160047 #23 ENSGT00940000161937 #24 ENSGT00940000163537 #25 ENSGT00940000161521 #26 ENSGT00940000162157 #27 ENSGT00940000159364 #28 ENSGT00940000161581 #29 ENSGT00390000008281 #30 ENSGT00390000003062 #31 ENSGT00940000154716 #32 ENSGT00950000183212.C #33 ENSGT00950000183065.B #34 ENSGT00940000162698 #35 ENSGT00940000160649 #36 ENSGT00390000000698 #37 Rodentia ANCESTRAL SPECIES ENSGT00730000111580 ENSGT00940000161842.b ENSGT00940000163498 ENSGT00940000163905 ENSGT00940000161842.a ENSGT00940000162465 ENSGT00940000154467.b.b.b ##20 ENSGT00940000154467.b.b.a ##20 ENSGT00940000170498 ENSGT00940000154467.b.a ##20 ENSGT00940000154467.a #20 ENSGT00940000163983 ENSGT00940000164620 ENSGT00940000162966 ENSGT00940000154172 #21 ENSGT00940000154197.b.b #22 ENSGT00940000160047 #23 ENSGT00940000161937 #24 ENSGT00940000163537 #25 ENSGT00940000161521 #26 ENSGT00940000162157 #27 ENSGT00940000159364 #28 ENSGT00940000161581 #29 ENSGT00390000008281 #30 ENSGT00390000003062 #31 ENSGT00940000154716 #32 ENSGT00950000183212.C #33 ENSGT00950000183065.B #34 ENSGT00940000162698 #35 ENSGT00940000160649 #36 ENSGT00390000000698 #37 Rodentia_B ANCESTRAL SPECIES ENSGT00940000162349 ENSGT00940000162657 ENSGT00700000104637 ENSGT00730000111592 ENSGT00730000111554 ENSGT00940000161842.a ENSGT00940000162465 ENSGT00940000154467.b.b.b ##20 ENSGT00940000154467.b.b.a ##20 ENSGT00940000154467.b.a ##20 ENSGT00940000154467.a #20 ENSGT00940000163983 ENSGT00940000164620 ENSGT00940000162966 ENSGT00940000154172 #21 ENSGT00940000154197.b.b #22 ENSGT00940000160047 #23 ENSGT00940000161937 #24 ENSGT00940000163537 #25 ENSGT00940000161521 #26 ENSGT00940000162157 #27 ENSGT00940000159364 #28 ENSGT00940000161581 #29 ENSGT00390000008281 #30 ENSGT00390000003062 #31 ENSGT00940000154716 #32 ENSGT00950000183212.C #33 ENSGT00950000183065.B #34 ENSGT00940000162698 #35 ENSGT00940000160649 #36 ENSGT00390000000698 #37 Myomorpha ANCESTRAL SPECIES 12 ENSGT00940000161606 ENSGT00940000162349 ENSGT00940000162657 ENSGT00700000104637 ENSGT00730000111592 ENSGT00730000111554 ENSGT00940000162465 ENSGT00940000154467.b.b.b ##20 ENSGT00940000154467.b.b.a ##20 ENSGT00940000154467.b.a ##20 ENSGT00940000154467.a #20 ENSGT00940000163983 ENSGT00940000164620 ENSGT00940000162966 ENSGT00940000154172 #21 ENSGT00940000154197.b.b #22 ENSGT00940000160047 #23 ENSGT00940000161937 #24 ENSGT00940000163537 #25 ENSGT00940000161521 #26 ENSGT00940000162157 #27 ENSGT00940000159364 #28 ENSGT00940000161581 #29 ENSGT00390000008281 #30 ENSGT00390000003062 #31 ENSGT00940000154716 #32 ENSGT00950000183212.C #33 ENSGT00950000183065.B #34 ENSGT00940000162698 #35 ENSGT00940000160649 #36 ENSGT00390000000698 #37 Muroidea ANCESTRAL SPECIES 6 ENSGT00780000122937 ENSGT00940000169512 ENSGT00730000111580 ENSGT00940000163710 ENSGT01010000222956 ENSGT01100000265211 ENSGT00940000162465 ENSGT00940000154467.b.b.b ##20 ENSGT00940000154467.b.b.a ##20 ENSGT00940000154467.b.a ##20 ENSGT00940000154467.a #20 ENSGT00940000163983 ENSGT00940000164620 ENSGT00940000162966 ENSGT00940000154172 #21 ENSGT00940000154197.b.b #22 ENSGT00940000160047 #23 ENSGT00940000161937 #24 ENSGT00940000163537 #25 ENSGT00940000161521 #26 ENSGT00940000162157 #27 ENSGT00940000159364 #28 ENSGT00940000161581 #29 ENSGT00390000008281 #30 ENSGT00390000003062 #31 ENSGT00940000154716 #32 ENSGT00950000183212.C #33 ENSGT00950000183065.B #34 ENSGT00940000162698 #35 ENSGT00940000160649 #36 ENSGT00390000000698 #37 Upper Galilee mountains blind mole rat MODERN SPECIES 593 ENSNGAG00000015477 #20 S100a11 (ENSNGAG00000016757) #21 S100a10 (ENSNGAG00000011461) #22 Them4 (ENSNGAG00000012370) #23 Them5 (ENSNGAG00000013042) #24 C2cd4d (ENSNGAG00000013377) #25 Rorc (ENSNGAG00000016436) #26 Lingo4 (ENSNGAG00000016843) #27 Tdrkh (ENSNGAG00000017825) #28 Oaz3 (ENSNGAG00000019961) #29 Mrpl9 (ENSNGAG00000010578) #30 Riiad1 (ENSNGAG00000017842) #31 Celf3 (ENSNGAG00000021612) #32 Snx27 (ENSNGAG00000013411) #33 Tuft1 (ENSNGAG00000016432) #34 ENSNGAG00000012043 #35 Pogz (ENSNGAG00000006487) #36 Psmb4 (ENSNGAG00000014782) #37 Muroidea_A ANCESTRAL SPECIES 5 ENSGT00730000111554 ENSGT00730000111580 ENSGT00940000163905 ENSGT00940000163710.q.a ENSGT01010000222956 ENSGT00860000136028 ENSGT00940000162465 ENSGT00940000154467.b.b.b ##20 ENSGT00940000154467.b.b.a ##20 ENSGT00940000154467.b.a ##20 ENSGT00940000154467.a #20 ENSGT00940000163983 ENSGT00940000164620 ENSGT00940000162966 ENSGT00940000154172 #21 ENSGT00940000154197.b.b #22 ENSGT00940000154376.b.e.a ENSGT00940000160047 #23 ENSGT00940000161937 #24 ENSGT00940000163537 #25 ENSGT00940000161521 #26 ENSGT00940000162157 #27 ENSGT00940000159364 #28 ENSGT00940000161581 #29 ENSGT00390000008281 #30 ENSGT00390000003062 #31 ENSGT00940000154716 #32 ENSGT00950000183212.C #33 ENSGT00950000183065.B #34 ENSGT00940000162698 #35 ENSGT00940000160649 #36 Cricetidae ANCESTRAL SPECIES 6 ENSGT00780000122937 ENSGT00940000167222 ENSGT01050000245068.A ENSGT00940000161842.a.c ENSGT00730000111554 ENSGT00730000111580 ENSGT00940000163905 ENSGT01100000265211 ENSGT00940000162465 ENSGT00940000154467.b.b.b ##20 ENSGT00940000154467.b.b.a ##20 ENSGT00940000154467.a #20 ENSGT00940000163983 ENSGT00940000162966 ENSGT00940000154172 #21 ENSGT00940000154197.b.b #22 ENSGT00940000154376.b.e.a ENSGT00940000160047 #23 ENSGT00940000161937 #24 ENSGT00940000163537 #25 ENSGT00940000161521 #26 ENSGT00940000162157 #27 ENSGT00940000159364 #28 ENSGT00940000161581 #29 ENSGT00390000008281 #30 ENSGT00390000003062 #31 ENSGT00940000154716 #32 ENSGT00950000183212.C #33 ENSGT00950000183065.B #34 ENSGT00940000162698 #35 ENSGT00940000160649 #36 Cricetidae_B ANCESTRAL SPECIES 3 ENSGT00730000114093 ENSGT00780000122937 ENSGT00940000167222 ENSGT00940000161842.a.c ENSGT00730000111554 ENSGT00730000111580 ENSGT00940000163905 ENSGT01100000265211 ENSGT00940000162465 ENSGT00940000154467.b.b.b ##20 ENSGT00940000154467.b.b.a ##20 ENSGT00940000154467.a #20 ENSGT00940000164620 ENSGT00940000162966 ENSGT00940000154172 #21 ENSGT00940000154197.b.b #22 ENSGT00940000154376.b.e.a ENSGT00940000160047 #23 ENSGT00940000161937 #24 ENSGT00940000163537 #25 ENSGT00940000161521 #26 ENSGT00940000162157 #27 ENSGT00940000159364 #28 ENSGT00940000161581 #29 ENSGT00390000008281 #30 ENSGT00390000003062 #31 ENSGT00940000154716 #32 ENSGT00950000183212.C #33 ENSGT00950000183065.B #34 ENSGT00940000162698 #35 ENSGT00940000160649 #36 Northern American deer mouse DUPLICATION Northern American deer mouse MODERN SPECIES 19 ENSPEMG00000002108 Kprp (ENSPEMG00000003567) ENSPEMG00000007888 ENSPEMG00000024567 ENSPEMG00000028390 ENSPEMG00000030519 ENSPEMG00000025047 Crct1 (ENSPEMG00000025851) Lce1m (ENSPEMG00000028998) Crnn (ENSPEMG00000015891) ENSPEMG00000027135 ##20 ENSPEMG00000029220 ##20 ENSPEMG00000009460 #20 Tchhl1 (ENSPEMG00000023251) S100a11 (ENSPEMG00000027141) #21 ENSPEMG00000028727 #22 ENSPEMG00000028073 ENSPEMG00000010771 Them4 (ENSPEMG00000017604) #23 Them5 (ENSPEMG00000009567) #24 C2cd4d (ENSPEMG00000029177) #25 Rorc (ENSPEMG00000019266) #26 Lingo4 (ENSPEMG00000002211) #27 Tdrkh (ENSPEMG00000011171) #28 Oaz3 (ENSPEMG00000008922) #29 Mrpl9 (ENSPEMG00000011374) #30 Riiad1 (ENSPEMG00000019003) #31 Celf3 (ENSPEMG00000001184) #32 Snx27 (ENSPEMG00000009710) #33 Tuft1 (ENSPEMG00000014366) #34 ENSPEMG00000015782 #35 Northern American deer mouse MODERN SPECIES 11 Hacd4 (ENSPEMG00000016283) ENSPEMG00000013210 Focad (ENSPEMG00000000124) ENSPEMG00000008739 ENSPEMG00000029974 Slc24a2 (ENSPEMG00000019954) Acer2 (ENSPEMG00000020047) ENSPEMG00000020062 Dennd4c (ENSPEMG00000020187) Plin2 (ENSPEMG00000020242) Haus6 (ENSPEMG00000028376) Rraga (ENSPEMG00000012776) Saxo1 (ENSPEMG00000000040) Adamtsl1 (ENSPEMG00000005320) Sh3gl2 (ENSPEMG00000010691) ENSPEMG00000012875 #22 Cntln (ENSPEMG00000013809) Bnc2 (ENSPEMG00000006553) ENSPEMG00000026637 Ccdc171 (ENSPEMG00000009589) Psip1 (ENSPEMG00000015309) Snapc3 (ENSPEMG00000015671) Ttc39b (ENSPEMG00000017249) ENSPEMG00000028674 Frem1 (ENSPEMG00000007771) Cer1 (ENSPEMG00000013498) Zdhhc21 (ENSPEMG00000011202) Nfib (ENSPEMG00000015036) Mpdz (ENSPEMG00000002221) Lurap1l (ENSPEMG00000028913) ENSPEMG00000026523 Prairie vole MODERN SPECIES 99 ENSMOCG00000005972 ENSMOCG00000004279 ENSMOCG00000005788 Kprp (ENSMOCG00000005848) ENSMOCG00000005487 2310050C09Rik (ENSMOCG00000000973) ENSMOCG00000008570 ENSMOCG00000010107 ENSMOCG00000021258 ENSMOCG00000004193 Crnn (ENSMOCG00000019488) ENSMOCG00000022052 ENSMOCG00000000629 ENSMOCG00000007199 Tchhl1 (ENSMOCG00000021433) S100a10 (ENSMOCG00000004139) #22 ENSMOCG00000022418 ENSMOCG00000022803 ENSMOCG00000015444 ENSMOCG00000016759 Cricetinae ANCESTRAL SPECIES 13 ENSGT01050000245068.A ENSGT01070000254540 ENSGT01050000245068.B ENSGT00940000161842.a.c ENSGT00730000111554 ENSGT00730000111580 ENSGT00940000163905 ENSGT01100000266463 ENSGT00940000162465 ENSGT00940000154467.b.b.b ##20 ENSGT00940000154467.b.b.a ##20 ENSGT00940000154467.a #20 ENSGT00940000163983 ENSGT00940000162966 ENSGT00940000154172 #21 ENSGT00940000154197.b.b #22 Golden Hamster DUPLICATION Golden Hamster MODERN SPECIES 714 ENSMAUG00000008992 ENSMAUG00000014317 ENSMAUG00000021993 ENSMAUG00000018162 ENSMAUG00000018011 Kprp (ENSMAUG00000009358) ENSMAUG00000009030 2310050C09Rik (ENSMAUG00000021982) ENSMAUG00000008983 ENSMAUG00000009303 ENSMAUG00000009142 ENSMAUG00000003498 Crnn (ENSMAUG00000001754) Tchhl1 (ENSMAUG00000017940) S100a11 (ENSMAUG00000019826) #21 ENSMAUG00000021385 #22 Golden Hamster MODERN SPECIES 740 ENSMAUG00000006579 Tyrp1 (ENSMAUG00000017874) Lurap1l (ENSMAUG00000014887) ENSMAUG00000005222 ENSMAUG00000003146 Nfib (ENSMAUG00000007632) Zdhhc21 (ENSMAUG00000000495) Cer1 (ENSMAUG00000013311) Frem1 (ENSMAUG00000014922) ENSMAUG00000011212 #22 Ttc39b (ENSMAUG00000008949) ENSMAUG00000002025 ENSMAUG00000008531 Psip1 (ENSMAUG00000014312) Ccdc171 (ENSMAUG00000013269) Bnc2 (ENSMAUG00000017038) Cntln (ENSMAUG00000016827) Chinese hamster chok1gshd MODERN SPECIES 352 Kprp (ENSCGRG00001011269) ENSCGRG00001013323 ENSCGRG00001011007 ENSCGRG00001011825 ENSCGRG00001011142 ENSCGRG00001011125 ENSCGRG00001010698 ENSCGRG00001010946 Crnn (ENSCGRG00001009912) Flg2 (ENSCGRG00001004341) ##20 ENSCGRG00001024443 ##20 ENSCGRG00001013639 #20 ENSCGRG00001017115 Tchhl1 (ENSCGRG00001014681) S100a11 (ENSCGRG00001023641) #21 S100a10 (ENSCGRG00001013243) #22 Murinae ANCESTRAL SPECIES 5 ENSGT00960000186821 ENSGT00730000111554 ENSGT00730000111580 ENSGT00940000163710.q.a ENSGT01010000222956 ENSGT00860000136028 ENSGT00940000162465 ENSGT00940000154467.b.b.b ##20 ENSGT00940000154467.b.b.a ##20 ENSGT00940000154467.b.a ##20 ENSGT00940000154467.a #20 ENSGT00940000163983 ENSGT00940000164620 ENSGT00940000162966 ENSGT00940000154172 #21 ENSGT00940000154197.b.b #22 ENSGT00940000154376.b.e.a.k ENSGT00940000160047 #23 ENSGT00940000161937 #24 ENSGT00940000163537 #25 ENSGT00940000161521 #26 ENSGT00940000162157 #27 ENSGT00940000159364 #28 ENSGT00940000161581 #29 ENSGT00390000008281 #30 ENSGT00390000003062 #31 ENSGT00940000154716 #32 ENSGT00950000183212.C #33 ENSGT00950000183065.B #34 ENSGT00940000162698 #35 ENSGT00940000160649 #36 Mus ANCESTRAL SPECIES 7 ENSGT00730000111554 ENSGT00950000183531.b ENSGT00730000111580 ENSGT00940000163710.q.a.b.a.a ENSGT00940000163710.q.a.a ENSGT01010000222956 ENSGT00860000136028 ENSGT00940000162465 ENSGT00940000154467.b.b.b ##20 ENSGT00940000154467.b.b.a ##20 ENSGT00940000154467.b.a ##20 ENSGT00940000154467.a #20 ENSGT00940000164620 ENSGT00940000162966 ENSGT00940000154172 #21 ENSGT00940000154197.b.b #22 ENSGT00940000160047 #23 ENSGT00940000161937 #24 ENSGT00940000163537 #25 ENSGT00940000161521 #26 ENSGT00940000162157 #27 ENSGT00940000159364 #28 ENSGT00940000161581 #29 ENSGT00390000008281 #30 ENSGT00390000003062 #31 ENSGT00940000154716 #32 ENSGT00950000183212.C #33 ENSGT00950000183065.B #34 ENSGT00940000162698 #35 ENSGT00940000160649 #36 ENSGT00390000000698 #37 Mus_A ANCESTRAL SPECIES 9 ENSGT00950000183531.b ENSGT00730000111580 ENSGT00940000163710.q.a.b.a.a ENSGT00940000163710.q.a.a ENSGT01010000222956 ENSGT00860000136028 ENSGT00940000162465 ENSGT00940000154467.b.b.b ##20 ENSGT00940000154467.b.b.a ##20 ENSGT00940000154467.b.a ##20 ENSGT00940000154467.a #20 ENSGT00940000153096.b.d.s.b ENSGT00940000164620 ENSGT00940000162966 ENSGT00940000154172 #21 ENSGT00940000154197.b.b #22 ENSGT00940000160047 #23 ENSGT00940000161937 #24 ENSGT00940000163537 #25 ENSGT00940000161521 #26 ENSGT00940000162157 #27 ENSGT00940000159364 #28 ENSGT00940000161581 #29 ENSGT00390000008281 #30 ENSGT00390000003062 #31 ENSGT00940000154716 #32 ENSGT00950000183212.C #33 ENSGT00950000183065.B #34 ENSGT00940000162698 #35 ENSGT00940000160649 #36 ENSGT00390000000698 #37 Ryukyu mouse MODERN SPECIES 12 MGP_CAROLIEiJ_G0025289 MGP_CAROLIEiJ_G0025290 MGP_CAROLIEiJ_G0025291 MGP_CAROLIEiJ_G0025292 Crct1 (MGP_CAROLIEiJ_G0025293) Lce1m (MGP_CAROLIEiJ_G0025294) Crnn (MGP_CAROLIEiJ_G0025295) MGP_CAROLIEiJ_G0025296 ##20 Flg (MGP_CAROLIEiJ_G0025297) ##20 MGP_CAROLIEiJ_G0025298 MGP_CAROLIEiJ_G0025299 #20 MGP_CAROLIEiJ_G0025300 MGP_CAROLIEiJ_G0025301 Tchhl1 (MGP_CAROLIEiJ_G0025302) S100a11 (MGP_CAROLIEiJ_G0025303) #21 S100a10 (MGP_CAROLIEiJ_G0025304) #22 MGP_CAROLIEiJ_G0025305 #23 MGP_CAROLIEiJ_G0025306 #24 C2cd4d (MGP_CAROLIEiJ_G0025307) #25 Rorc (MGP_CAROLIEiJ_G0025308) #26 Lingo4 (MGP_CAROLIEiJ_G0025309) #27 Tdrkh (MGP_CAROLIEiJ_G0025310) #28 MGP_CAROLIEiJ_G0025311 #29 Mrpl9 (MGP_CAROLIEiJ_G0025312) #30 Riiad1 (MGP_CAROLIEiJ_G0025313) #31 Celf3 (MGP_CAROLIEiJ_G0025314) #32 Snx27 (MGP_CAROLIEiJ_G0025315) #33 Tuft1 (MGP_CAROLIEiJ_G0025316) #34 MGP_CAROLIEiJ_G0025317 MGP_CAROLIEiJ_G0025318 #35 Pogz (MGP_CAROLIEiJ_G0025319) #36 Mus_B ANCESTRAL SPECIES 8 ENSGT00950000183531.b ENSGT00730000111580 ENSGT00940000163710.q.a.b.a.a ENSGT00940000163710.q.a.a ENSGT01010000222956 ENSGT00860000136028 ENSGT00940000162465 ENSGT00940000154467.b.b.b ##20 ENSGT00940000154467.b.b.a ##20 ENSGT00940000154467.b.a ##20 ENSGT00940000154467.a #20 ENSGT00940000153096.b.d.s.b ENSGT00940000164620 ENSGT00940000162966 ENSGT00940000154172.kb.a #21 ENSGT00940000154197.b.b #22 ENSGT00940000160047 #23 ENSGT00940000161937 #24 ENSGT00940000163537 #25 ENSGT00940000161521 #26 ENSGT00940000162157 #27 ENSGT00940000159364 #28 ENSGT00940000161581 #29 ENSGT00390000008281 #30 ENSGT00390000003062 #31 ENSGT00940000154716 #32 ENSGT00950000183212.C #33 ENSGT00950000183065.B #34 ENSGT00940000162698 #35 ENSGT00940000160649 #36 ENSGT00390000000698 #37 Mouse MODERN SPECIES 12 Lce3c (ENSMUSG00000045475) Lce3d (ENSMUSG00000043472) Lce3e (ENSMUSG00000074433) Lce3f (ENSMUSG00000068885) Crct1 (ENSMUSG00000027913) Lce1m (ENSMUSG00000027912) Tdpoz8 (ENSMUSG00000096879) Crnn (ENSMUSG00000078657) Flg2 (ENSMUSG00000049133) ##20 Flg (ENSMUSG00000102439) ##20 Hrnr (ENSMUSG00000041991) ##20 Rptn (ENSMUSG00000041984) #20 Tchh (ENSMUSG00000052415) Tchhl1 (ENSMUSG00000027908) S100a11 (ENSMUSG00000027907) #21 S100a10 (ENSMUSG00000041959) #22 Tdpoz2 (ENSMUSG00000103362) Tdpoz1 (ENSMUSG00000094084) Gm5773 (ENSMUSG00000068879) Tdpoz4 (ENSMUSG00000060256) Tdpoz3 (ENSMUSG00000058005) Tdpoz9-ps1 (ENSMUSG00000095822) Tdpoz5 (ENSMUSG00000094163) Tdpoz9 (ENSMUSG00000094328) Tdpoz7 (ENSMUSG00000095251) Spopfm2 (ENSMUSG00000074424) Spopfm3 (ENSMUSG00000090268) Them4 (ENSMUSG00000028145) #23 Them5 (ENSMUSG00000028148) #24 C2cd4d (ENSMUSG00000091648) #25 Rorc (ENSMUSG00000028150) #26 Mus_C ANCESTRAL SPECIES 6 ENSGT00950000184448 ENSGT00730000111554 ENSGT00950000183531.b ENSGT00730000111580 ENSGT00940000163710.q.a.a ENSGT01010000222956 ENSGT00860000136028 ENSGT00940000162465 ENSGT00940000154467.b.b.a ##20 ENSGT00940000154467.b.a ##20 ENSGT00940000154467.a #20 ENSGT00940000153096.b.d.s.b ENSGT00940000164620 ENSGT00940000162966 ENSGT00940000154172.kb.a #21 ENSGT00940000154197.b.b #22 ENSGT00940000160047 #23 ENSGT00940000161937 #24 ENSGT00940000163537 #25 ENSGT00940000161521 #26 ENSGT00940000162157 #27 ENSGT00940000159364 #28 ENSGT00940000161581 #29 ENSGT00390000008281 #30 ENSGT00390000003062 #31 ENSGT00940000154716 #32 ENSGT00950000183212.C #33 ENSGT00950000183065.B #34 ENSGT00940000162698 #35 ENSGT00940000160649 #36 ENSGT00390000000698 #37 Steppe mouse MODERN SPECIES 2268 ENSMSIG00000013333 ##20 ENSMSIG00000013325 #20 ENSMSIG00000013304 ENSMSIG00000013297 #20 Tchhl1 (ENSMSIG00000013282) ENSMSIG00000013266 #21 S100a10 (ENSMSIG00000013252) #22 spretus MODERN SPECIES 12 Lce1k (MGP_SPRETEiJ_G0026229) Kprp (MGP_SPRETEiJ_G0026231) Lce1l (MGP_SPRETEiJ_G0026232) 2310050C09Rik (MGP_SPRETEiJ_G0026233) MGP_SPRETEiJ_G0026234 MGP_SPRETEiJ_G0026235 Crct1 (MGP_SPRETEiJ_G0026236) Lce1m (MGP_SPRETEiJ_G0026237) Crnn (MGP_SPRETEiJ_G0026238) Flg (MGP_SPRETEiJ_G0026240) ##20 MGP_SPRETEiJ_G0026241 #20 MGP_SPRETEiJ_G0026242 Tchh (MGP_SPRETEiJ_G0026243) Tchhl1 (MGP_SPRETEiJ_G0026244) MGP_SPRETEiJ_G0026245 #21 S100a10 (MGP_SPRETEiJ_G0026246) #22 Them4 (MGP_SPRETEiJ_G0026247) #23 Them5 (MGP_SPRETEiJ_G0026248) #24 C2cd4d (MGP_SPRETEiJ_G0026249) #25 Rorc (MGP_SPRETEiJ_G0026250) #26 Lingo4 (MGP_SPRETEiJ_G0026251) #27 Tdrkh (MGP_SPRETEiJ_G0026252) #28 MGP_SPRETEiJ_G0026253 #29 Mrpl9 (MGP_SPRETEiJ_G0026254) #30 Riiad1 (MGP_SPRETEiJ_G0026255) #31 Celf3 (MGP_SPRETEiJ_G0026256) #32 Snx27 (MGP_SPRETEiJ_G0026257) #33 MGP_SPRETEiJ_G0026258 #34 MGP_SPRETEiJ_G0026259 MGP_SPRETEiJ_G0026260 #35 Pogz (MGP_SPRETEiJ_G0026261) #36 Shrew mouse MODERN SPECIES 17 Lce1l (MGP_PahariEiJ_G0026731) 2310050C09Rik (MGP_PahariEiJ_G0026732) MGP_PahariEiJ_G0026733 MGP_PahariEiJ_G0026734 MGP_PahariEiJ_G0026735 MGP_PahariEiJ_G0026736 MGP_PahariEiJ_G0026737 MGP_PahariEiJ_G0026738 Crct1 (MGP_PahariEiJ_G0026739) Lce1m (MGP_PahariEiJ_G0026740) Crnn (MGP_PahariEiJ_G0026741) MGP_PahariEiJ_G0026742 ##20 MGP_PahariEiJ_G0026744 Tchhl1 (MGP_PahariEiJ_G0026745) S100a11 (MGP_PahariEiJ_G0026746) #21 S100a10 (MGP_PahariEiJ_G0026747) #22 Them4 (MGP_PahariEiJ_G0026748) #23 Them5 (MGP_PahariEiJ_G0026749) #24 C2cd4d (MGP_PahariEiJ_G0026750) #25 Rorc (MGP_PahariEiJ_G0026751) #26 Lingo4 (MGP_PahariEiJ_G0026752) #27 Tdrkh (MGP_PahariEiJ_G0026753) #28 MGP_PahariEiJ_G0026754 #29 Mrpl9 (MGP_PahariEiJ_G0026755) #30 MGP_PahariEiJ_G0026756 #31 Celf3 (MGP_PahariEiJ_G0026757) #32 Snx27 (MGP_PahariEiJ_G0026758) #33 Tuft1 (MGP_PahariEiJ_G0026759) #34 MGP_PahariEiJ_G0026760 #35 Pogz (MGP_PahariEiJ_G0026761) #36 Psmb4 (MGP_PahariEiJ_G0026762) #37 Rat MODERN SPECIES 11 LOC120100589 (ENSRNOG00000064953) Lce3fl1 (ENSRNOG00000063005) Crct1 (ENSRNOG00000009574) Lce1m (ENSRNOG00000009581) ENSRNOG00000065518 Crnn (ENSRNOG00000008721) ENSRNOG00000064129 ##20 ENSRNOG00000069536 #20 ENSRNOG00000064486 ##20 Rptn (ENSRNOG00000018679) #20 Tchh (ENSRNOG00000069082) #20 Tchh (ENSRNOG00000056746) Tchhl1 (ENSRNOG00000009610) ENSRNOG00000065314 S100a11 (ENSRNOG00000010105) #21 S100a10 (ENSRNOG00000023226) #22 Tdpoz1-ps4 (ENSRNOG00000066364) RGD1566337 (ENSRNOG00000063844) LOC100911679 (ENSRNOG00000063988) RGD1564313 (ENSRNOG00000064397) Tdpoz2l1 (ENSRNOG00000062928) AABR07012426.1 (ENSRNOG00000050263) LOC120100595 (ENSRNOG00000065808) Tdpoz1-ps13 (ENSRNOG00000063069) Tdpoz1-ps14 (ENSRNOG00000063985) LOC120101040 (ENSRNOG00000070497) LOC120101042 (ENSRNOG00000064402) LOC120101043 (ENSRNOG00000068421) Tdpoz1-ps9 (ENSRNOG00000069915) Tdpoz2 (ENSRNOG00000065162) LOC102553503 (ENSRNOG00000064598) Lesser Egyptian jerboa MODERN SPECIES 141 Pglyrp4 (ENSJJAG00000009619) Pglyrp3 (ENSJJAG00000019546) ENSJJAG00000005907 ENSJJAG00000009222 ENSJJAG00000005176 ENSJJAG00000007620 ENSJJAG00000022880 ENSJJAG00000014882 Kprp (ENSJJAG00000004578) 2310050C09Rik (ENSJJAG00000016312) ENSJJAG00000010637 ENSJJAG00000023669 ENSJJAG00000003622 ENSJJAG00000017745 S100a11 (ENSJJAG00000016706) #21 S100a10 (ENSJJAG00000015567) #22 Them4 (ENSJJAG00000010836) #23 Rorc (ENSJJAG00000009867) #26 Lingo4 (ENSJJAG00000017052) #27 Tdrkh (ENSJJAG00000000323) #28 Oaz3 (ENSJJAG00000006341) #29 Mrpl9 (ENSJJAG00000018784) #30 Riiad1 (ENSJJAG00000021268) #31 Celf3 (ENSJJAG00000020104) #32 Snx27 (ENSJJAG00000023845) #33 Tuft1 (ENSJJAG00000011616) #34 ENSJJAG00000003080 Pogz (ENSJJAG00000009420) #36 Psmb4 (ENSJJAG00000012721) #37 ENSJJAG00000006656 ENSJJAG00000023680 Kangaroo rat DUPLICATION Kangaroo rat DUPLICATION Kangaroo rat MODERN SPECIES 345 ENSDORG00000028790 ENSDORG00000027976 ENSDORG00000026601 ENSDORG00000029886 ENSDORG00000029857 ENSDORG00000024714 ENSDORG00000025777 ENSDORG00000011451 Kprp (ENSDORG00000026948) ENSDORG00000023568 ENSDORG00000026274 ENSDORG00000003644 ENSDORG00000025569 Crnn (ENSDORG00000002349) S100a11 (ENSDORG00000027002) #21 ENSDORG00000026060 #22 Them4 (ENSDORG00000015331) #23 Them5 (ENSDORG00000015328) #24 Rorc (ENSDORG00000015326) #26 Lingo4 (ENSDORG00000027587) #27 Tdrkh (ENSDORG00000015322) #28 Oaz3 (ENSDORG00000015321) #29 Mrpl9 (ENSDORG00000015320) #30 Celf3 (ENSDORG00000002488) #32 Snx27 (ENSDORG00000014172) #33 Tuft1 (ENSDORG00000026884) #34 ENSDORG00000007338 #35 Pogz (ENSDORG00000025298) #36 Psmb4 (ENSDORG00000028831) #37 ENSDORG00000015968 ENSDORG00000015967 Kangaroo rat MODERN SPECIES 337 Pla2g15 (ENSDORG00000010904) Esrp2 (ENSDORG00000000665) Nfatc3 (ENSDORG00000029167) Dus2 (ENSDORG00000001654) Ddx28 (ENSDORG00000028868) Slc12a4 (ENSDORG00000002837) Lcat (ENSDORG00000002836) Psmb10 (ENSDORG00000002832) Ctrl (ENSDORG00000025188) Pskh1 (ENSDORG00000010706) Nrn1l (ENSDORG00000010704) Edc4 (ENSDORG00000010702) ENSDORG00000027828 Thap11 (ENSDORG00000010701) Ranbp10 (ENSDORG00000010698) ENSDORG00000026702 #22 Gfod2 (ENSDORG00000000117) Enkd1 (ENSDORG00000000115) Pard6a (ENSDORG00000000114) Carmil2 (ENSDORG00000000112) Ctcf (ENSDORG00000000111) Ripor1 (ENSDORG00000014643) Agrp (ENSDORG00000013972) Atp6v0d1 (ENSDORG00000013966) Hsd11b2 (ENSDORG00000013965) Zdhhc1 (ENSDORG00000003276) Tppp3 (ENSDORG00000005871) Lrrc36 (ENSDORG00000005869) Kctd19 (ENSDORG00000005868) ENSDORG00000005865 Slc9a5 (ENSDORG00000005859) Kangaroo rat MODERN SPECIES 339 ENSDORG00000027569 Pum2 (ENSDORG00000011453) Sdc1 (ENSDORG00000014605) Laptm4a (ENSDORG00000014089) Matn3 (ENSDORG00000014087) Wdr35 (ENSDORG00000014086) Ttc32 (ENSDORG00000029568) Osr1 (ENSDORG00000000798) Nt5c1b (ENSDORG00000012516) Rdh14 (ENSDORG00000019712) Kcns3 (ENSDORG00000024097) Msgn1 (ENSDORG00000003509) Gen1 (ENSDORG00000010754) Smc6 (ENSDORG00000010753) Vsnl1 (ENSDORG00000024043) ENSDORG00000026713 #22 Cyria (ENSDORG00000010274) Mycn (ENSDORG00000009906) Ddx1 (ENSDORG00000012847) Nbas (ENSDORG00000012843) Lratd1 (ENSDORG00000023584) Trib2 (ENSDORG00000030161) Lpin1 (ENSDORG00000010485) Greb1 (ENSDORG00000009946) E2f6 (ENSDORG00000013213) Rock2 (ENSDORG00000008054) Pqlc3 (ENSDORG00000025612) ENSDORG00000027660 Kcnf1 (ENSDORG00000026132) Pdia6 (ENSDORG00000003594) Atp6v1c2 (ENSDORG00000003593) Rodentia_A ANCESTRAL SPECIES ENSGT01050000246051 ENSGT01020000230889 ENSGT00780000122937 ENSGT00730000111554 ENSGT00730000111580 ENSGT00940000161842.b ENSGT00940000163498 ENSGT00940000163905 ENSGT00940000162465 ENSGT00940000154467.b.b.b ##20 ENSGT00940000170498 ENSGT00940000154467.b.a ##20 ENSGT00940000154467.a #20 ENSGT00940000163983 ENSGT00940000154172 #21 ENSGT00940000154197.b.b #22 ENSGT00940000160047 #23 ENSGT00940000161937 #24 ENSGT00940000163537 #25 ENSGT00940000161521 #26 ENSGT00940000162157 #27 ENSGT00940000159364 #28 ENSGT00940000161581 #29 ENSGT00390000008281 #30 ENSGT00390000003062 #31 ENSGT00940000154716 #32 ENSGT00950000183212.C #33 ENSGT00950000183065.B #34 ENSGT00940000154489.B ENSGT00940000162698 #35 ENSGT00940000160649 #36 Sciuridae ANCESTRAL SPECIES ENSGT01020000230889 ENSGT00780000122937 ENSGT00730000111554 ENSGT00730000111580 ENSGT00940000161842.b ENSGT00940000163498 ENSGT00940000163905 ENSGT00940000162465 ENSGT00940000154467.b.b.b ##20 ENSGT00940000170498.a ENSGT00940000154467.b.b.a ##20 ENSGT00940000154467.b.a ##20 ENSGT00940000154467.a #20 ENSGT00940000163983 ENSGT00940000154172 #21 ENSGT00940000154197.b.b #22 ENSGT00940000160047 #23 ENSGT00940000161937 #24 ENSGT00940000163537 #25 ENSGT00940000161521 #26 ENSGT00940000162157 #27 ENSGT00940000159364 #28 ENSGT00940000161581 #29 ENSGT00390000008281 #30 ENSGT00390000003062 #31 ENSGT00940000154716 #32 ENSGT00950000183212.C #33 ENSGT00950000183065.B #34 ENSGT00940000154489.B ENSGT00940000162698 #35 ENSGT00940000160649 #36 Eurasian red squirrel MODERN SPECIES ENSSVLG00005009341 ENSSVLG00005009331 ENSSVLG00005009194 ENSSVLG00005003674 ENSSVLG00005003667 CRNN (ENSSVLG00005003616) ENSSVLG00005003594 ##20 ENSSVLG00005003582 ENSSVLG00005003567 ENSSVLG00005003502 HRNR (ENSSVLG00005003432) ##20 ENSSVLG00005003410 #20 ENSSVLG00005003377 ENSSVLG00005003358 #21 ENSSVLG00005003347 #21 S100A10 (ENSSVLG00005003336) #22 THEM4 (ENSSVLG00005003315) #23 THEM5 (ENSSVLG00005003303) #24 C2CD4D (ENSSVLG00005003299) #25 RORC (ENSSVLG00005003240) #26 LINGO4 (ENSSVLG00005003205) #27 TDRKH (ENSSVLG00005003148) #28 OAZ3 (ENSSVLG00005003077) #29 ENSSVLG00005003027 #30 RIIAD1 (ENSSVLG00005002999) #31 CELF3 (ENSSVLG00005002946) #32 SNX27 (ENSSVLG00005002849) #33 TUFT1 (ENSSVLG00005002739) #34 CGN (ENSSVLG00005002674) POGZ (ENSSVLG00005002594) #36 PSMB4 (ENSSVLG00005002561) #37 Marmotini ANCESTRAL SPECIES 33 ENSGT00940000161986 ENSGT00940000161896 ENSGT00940000163629 ENSGT00910000144375 ENSGT00910000144329 ENSGT00940000162189 ENSGT00940000161606 ENSGT00940000162349 ENSGT00940000162657 ENSGT00940000163019.a ENSGT00940000162465 ENSGT00940000154467.b.b.a ##20 ENSGT00940000154467.b.a ##20 ENSGT00940000154467.a #20 ENSGT00940000154172 #21 ENSGT00940000154197.b.b #22 ENSGT00940000160047 #23 ENSGT00940000161937 #24 ENSGT00940000163537 #25 ENSGT00940000161521 #26 ENSGT00940000162157 #27 ENSGT00940000159364 #28 ENSGT00940000161581 #29 ENSGT00390000008281 #30 ENSGT00390000003062 #31 ENSGT00940000154716 #32 ENSGT00950000183212.C #33 ENSGT00950000183065.B #34 ENSGT00940000162698 #35 ENSGT00940000160649 #36 ENSGT00390000000698 #37 Marmotini_b ANCESTRAL SPECIES 77 ENSGT00940000162465 ENSGT00940000154467.b.b.a ##20 ENSGT00940000154467.b.a ##20 ENSGT00940000154172 #21 ENSGT00940000154197.b.b #22 ENSGT00940000160047 #23 ENSGT00940000161937 #24 ENSGT00940000163537 #25 ENSGT00940000161521 #26 ENSGT00940000162157 #27 ENSGT00940000159364 #28 ENSGT00940000161581 #29 ENSGT00390000008281 #30 ENSGT00390000003062 #31 ENSGT00940000154716 #32 ENSGT00950000183212.C #33 ENSGT00950000183065.B #34 ENSGT00940000162698 #35 ENSGT00940000160649 #36 ENSGT00390000000698 #37 Squirrel MODERN SPECIES 180 PGLYRP3 (ENSSTOG00000005008) ENSSTOG00000008523 ENSSTOG00000006819 ENSSTOG00000032058 ENSSTOG00000022826 ENSSTOG00000000156 ENSSTOG00000030434 ENSSTOG00000033823 KPRP (ENSSTOG00000000154) C1orf68 (ENSSTOG00000033510) LCE5A (ENSSTOG00000023067) ENSSTOG00000029937 ENSSTOG00000019712 ENSSTOG00000034972 ENSSTOG00000033111 S100A10 (ENSSTOG00000023215) #22 THEM4 (ENSSTOG00000010762) #23 THEM5 (ENSSTOG00000010754) #24 RORC (ENSSTOG00000019386) #26 LINGO4 (ENSSTOG00000015241) #27 TDRKH (ENSSTOG00000006506) #28 OAZ3 (ENSSTOG00000031407) #29 RIIAD1 (ENSSTOG00000034652) #31 CELF3 (ENSSTOG00000022934) #32 SNX27 (ENSSTOG00000005289) #33 TUFT1 (ENSSTOG00000003909) #34 ENSSTOG00000003867 #35 POGZ (ENSSTOG00000012056) #36 PSMB4 (ENSSTOG00000012054) #37 SELENBP1 (ENSSTOG00000027196) RFX5 (ENSSTOG00000013246) Alpin marmot MODERN SPECIES 85 ENSMMMG00000018192 ENSMMMG00000018196 ENSMMMG00000018197 LCE7A (ENSMMMG00000018216) C1orf68 (ENSMMMG00000018221) ENSMMMG00000018223 ENSMMMG00000018241 LCE5A (ENSMMMG00000018245) ENSMMMG00000018247 ENSMMMG00000018264 ##20 ENSMMMG00000018274 ENSMMMG00000018282 ##20 ENSMMMG00000018292 ##20 RPTN (ENSMMMG00000018298) #20 S100A11 (ENSMMMG00000018305) #21 S100A10 (ENSMMMG00000018313) #22 THEM4 (ENSMMMG00000018374) #23 THEM5 (ENSMMMG00000018379) #24 RORC (ENSMMMG00000018387) #26 LINGO4 (ENSMMMG00000018432) #27 TDRKH (ENSMMMG00000018437) #28 OAZ3 (ENSMMMG00000018483) #29 ENSMMMG00000018501 #30 CELF3 (ENSMMMG00000018558) #32 SNX27 (ENSMMMG00000018570) #33 TUFT1 (ENSMMMG00000018579) #34 ENSMMMG00000018638 POGZ (ENSMMMG00000018654) #36 PSMB4 (ENSMMMG00000018764) #37 SELENBP1 (ENSMMMG00000018768) RFX5 (ENSMMMG00000018801) Hystricomorpha ANCESTRAL SPECIES ENSGT00940000154197.b.b #22 Naked mole-rat female DUPLICATION Naked mole-rat female MODERN SPECIES 22 WDR75 (ENSHGLG00000011577) SLC40A1 (ENSHGLG00000008999) ASDURF (ENSHGLG00000029891) ENSHGLG00000032663 ENSHGLG00000039700 ENSHGLG00000040561 FLACC1 (ENSHGLG00000007412) ENSHGLG00000037940 ENSHGLG00000004915 ENSHGLG00000004703 ENSHGLG00000034754 ENSHGLG00000003940 ENSHGLG00000002790 ENSHGLG00000042696 ENSHGLG00000008965 ENSHGLG00000040344 #22 ENSHGLG00000049153 ANKRD44 (ENSHGLG00000008625) ENSHGLG00000008285 ENSHGLG00000038699 HSPD1 (ENSHGLG00000007927) ENSHGLG00000042669 MOB4 (ENSHGLG00000050196) RFTN2 (ENSHGLG00000017636) MARS2 (ENSHGLG00000049320) BOLL (ENSHGLG00000017562) PLCL1 (ENSHGLG00000015970) ENSHGLG00000043283 SATB2 (ENSHGLG00000015892) ENSHGLG00000020697 C2orf69 (ENSHGLG00000040936) Naked mole-rat female DUPLICATION Naked mole-rat female MODERN SPECIES 19 LMAN1L (ENSHGLG00000000444) ULK3 (ENSHGLG00000000809) SCAMP2 (ENSHGLG00000001630) MPI (ENSHGLG00000000351) FAM219B (ENSHGLG00000048731) COX5A (ENSHGLG00000047174) ENSHGLG00000047540 RPP25 (ENSHGLG00000039962) SCAMP5 (ENSHGLG00000002763) PPCDC (ENSHGLG00000004861) C15orf39 (ENSHGLG00000033459) COMMD4 (ENSHGLG00000002044) NEIL1 (ENSHGLG00000043720) MAN2C1 (ENSHGLG00000000690) SIN3A (ENSHGLG00000015595) ENSHGLG00000042955 #22 PTPN9 (ENSHGLG00000001900) ENSHGLG00000036416 IMP3 (ENSHGLG00000047594) SNX33 (ENSHGLG00000032746) CSPG4 (ENSHGLG00000000788) ENSHGLG00000002838 ENSHGLG00000001339 HMG20A (ENSHGLG00000000560) PEAK1 (ENSHGLG00000001872) ENSHGLG00000020096 TSPAN3 (ENSHGLG00000048829) PSTPIP1 (ENSHGLG00000002685) RCN2 (ENSHGLG00000040045) SCAPER (ENSHGLG00000001955) ISL2 (ENSHGLG00000001431) Naked mole-rat female MODERN SPECIES 23 CLEC4F (ENSHGLG00000015223) CD207 (ENSHGLG00000017278) VAX2 (ENSHGLG00000038768) ATP6V1B1 (ENSHGLG00000034993) ANKRD53 (ENSHGLG00000015981) TEX261 (ENSHGLG00000047338) ENSHGLG00000015917 ENSHGLG00000039175 ENSHGLG00000050708 ZNF638 (ENSHGLG00000015789) DYSF (ENSHGLG00000007256) ENSHGLG00000043383 CYP26B1 (ENSHGLG00000016604) EXOC6B (ENSHGLG00000011639) ENSHGLG00000039406 ENSHGLG00000032593 #22 ENSHGLG00000040821 ENSHGLG00000006121 SPR (ENSHGLG00000041182) EMX1 (ENSHGLG00000036309) SFXN5 (ENSHGLG00000007851) RAB11FIP5 (ENSHGLG00000016021) SMYD5 (ENSHGLG00000015439) PRADC1 (ENSHGLG00000015353) CCT7 (ENSHGLG00000011761) FBXO41 (ENSHGLG00000010102) EGR4 (ENSHGLG00000009021) ENSHGLG00000039055 ENSHGLG00000044724 DUSP11 (ENSHGLG00000012958) ENSHGLG00000012325 Naked mole-rat female DUPLICATION Naked mole-rat female DUPLICATION Naked mole-rat female DUPLICATION Naked mole-rat female DUPLICATION Naked mole-rat female MODERN SPECIES 22 ENSHGLG00000000458 LRAT (ENSHGLG00000045268) ENSHGLG00000032409 ENSHGLG00000002344 ENSHGLG00000038593 ENSHGLG00000001875 ENSHGLG00000049616 ENSHGLG00000000870 ENSHGLG00000042451 ENSHGLG00000049550 ENSHGLG00000019770 ENSHGLG00000001548 ENSHGLG00000047631 IL15 (ENSHGLG00000038275) ENSHGLG00000007865 ENSHGLG00000042945 #22 ZNF330 (ENSHGLG00000000725) ENSHGLG00000048416 RNF150 (ENSHGLG00000000594) ENSHGLG00000049997 ENSHGLG00000001009 ENSHGLG00000044620 ENSHGLG00000048262 ENSHGLG00000000200 ENSHGLG00000000179 ENSHGLG00000000166 ELMOD2 (ENSHGLG00000043621) CLGN (ENSHGLG00000000153) SCOC (ENSHGLG00000035798) MAML3 (ENSHGLG00000039990) MGST2 (ENSHGLG00000040336) Naked mole-rat female MODERN SPECIES 26 WDTC1 (ENSHGLG00000013846) ENSHGLG00000044722 SLC9A1 (ENSHGLG00000036829) ENSHGLG00000047714 TENT5B (ENSHGLG00000034048) TRNP1 (ENSHGLG00000041801) KDF1 (ENSHGLG00000012217) NUDC (ENSHGLG00000011404) NR0B2 (ENSHGLG00000032117) GPATCH3 (ENSHGLG00000012492) GPN2 (ENSHGLG00000012257) SFN (ENSHGLG00000033145) ZDHHC18 (ENSHGLG00000018702) PIGV (ENSHGLG00000019195) ARID1A (ENSHGLG00000010530) ENSHGLG00000033713 #22 RPS6KA1 (ENSHGLG00000013826) ENSHGLG00000043190 DHDDS (ENSHGLG00000015297) ENSHGLG00000050208 ENSHGLG00000043841 CRYBG2 (ENSHGLG00000014835) ENSHGLG00000042566 UBXN11 (ENSHGLG00000014636) SH3BGRL3 (ENSHGLG00000014565) CEP85 (ENSHGLG00000012227) CNKSR1 (ENSHGLG00000012930) ENSHGLG00000012204 ZNF593 (ENSHGLG00000011938) C1orf232 (ENSHGLG00000013042) FAM110D (ENSHGLG00000011546) Naked mole-rat female MODERN SPECIES 26 CASP9 (ENSHGLG00000019310) ENSHGLG00000016895 CTRC (ENSHGLG00000018486) EFHD2 (ENSHGLG00000046486) FHAD1 (ENSHGLG00000018196) TMEM51 (ENSHGLG00000013366) ENSHGLG00000009940 ENSHGLG00000035804 CPT2 (ENSHGLG00000003070) ENSHGLG00000002034 ENSHGLG00000001648 LRP8 (ENSHGLG00000001818) ENSHGLG00000041952 NDC1 (ENSHGLG00000001547) ENSHGLG00000046232 ENSHGLG00000042903 #22 ENSHGLG00000040583 ENSHGLG00000001352 LRRC42 (ENSHGLG00000000742) ENSHGLG00000043225 TCEANC2 (ENSHGLG00000046573) ENSHGLG00000007958 CYB5RL (ENSHGLG00000001600) MRPL37 (ENSHGLG00000001515) SSBP3 (ENSHGLG00000000619) ACOT11 (ENSHGLG00000001977) FAM151A (ENSHGLG00000038314) ENSHGLG00000046321 ENSHGLG00000005631 PIK3CD (ENSHGLG00000005279) CLSTN1 (ENSHGLG00000004884) Naked mole-rat female MODERN SPECIES 10 ENSHGLG00000032534 TBX15 (ENSHGLG00000050081) ENSHGLG00000038215 ENSHGLG00000042619 HSD3B1 (ENSHGLG00000033840) ENSHGLG00000006464 ENSHGLG00000042386 ENSHGLG00000049042 ENSHGLG00000015205 ENSHGLG00000016365 ENSHGLG00000004729 ENSHGLG00000001174 ENSHGLG00000033772 ENSHGLG00000005182 ENSHGLG00000039288 ENSHGLG00000037846 #22 ENSHGLG00000038214 CHD1L (ENSHGLG00000008933) ENSHGLG00000018478 ENSHGLG00000048596 ENSHGLG00000034080 BCL9 (ENSHGLG00000013904) ENSHGLG00000004803 ENSHGLG00000043134 GJA5 (ENSHGLG00000037183) ENSHGLG00000006450 GJA8 (ENSHGLG00000020482) ENSHGLG00000008167 ENSHGLG00000009553 ENSHGLG00000049549 ENSHGLG00000041766 Naked mole-rat female DUPLICATION Naked mole-rat female MODERN SPECIES 31 F8 (ENSHGLG00000034300) ENSHGLG00000000581 MPP1 (ENSHGLG00000000629) DKC1 (ENSHGLG00000000649) ENSHGLG00000000701 ENSHGLG00000049532 ENSHGLG00000046464 ENSHGLG00000049566 ENSHGLG00000047737 ENSHGLG00000002010 ENSHGLG00000035389 ENSHGLG00000043323 IDS (ENSHGLG00000049970) AFF2 (ENSHGLG00000000634) ENSHGLG00000028863 ENSHGLG00000019716 #22 FMR1 (ENSHGLG00000000576) ENSHGLG00000040472 #22 ENSHGLG00000045634 SLITRK2 (ENSHGLG00000007935) ENSHGLG00000035566 ENSHGLG00000032750 ENSHGLG00000038876 ENSHGLG00000049672 ENSHGLG00000036529 ENSHGLG00000037583 ENSHGLG00000004407 ENSHGLG00000039059 SOX3 (ENSHGLG00000039208) ENSHGLG00000047068 ATP11C (ENSHGLG00000007759) Naked mole-rat female MODERN SPECIES 31 MCF2 (ENSHGLG00000013161) ENSHGLG00000009095 ATP11C (ENSHGLG00000007759) ENSHGLG00000047068 SOX3 (ENSHGLG00000039208) ENSHGLG00000039059 ENSHGLG00000004407 ENSHGLG00000037583 ENSHGLG00000036529 ENSHGLG00000049672 ENSHGLG00000038876 ENSHGLG00000032750 ENSHGLG00000035566 SLITRK2 (ENSHGLG00000007935) ENSHGLG00000045634 ENSHGLG00000040472 #22 FMR1 (ENSHGLG00000000576) ENSHGLG00000019716 #22 ENSHGLG00000028863 AFF2 (ENSHGLG00000000634) IDS (ENSHGLG00000049970) ENSHGLG00000043323 ENSHGLG00000035389 ENSHGLG00000002010 ENSHGLG00000047737 ENSHGLG00000049566 ENSHGLG00000046464 ENSHGLG00000049532 ENSHGLG00000000701 DKC1 (ENSHGLG00000000649) MPP1 (ENSHGLG00000000629) Naked mole-rat female MODERN SPECIES 31 ENSHGLG00000032329 ENSHGLG00000045854 FOXO4 (ENSHGLG00000013305) ENSHGLG00000004894 ENSHGLG00000010744 MED12 (ENSHGLG00000005421) NLGN3 (ENSHGLG00000009982) GJB1 (ENSHGLG00000004743) ZMYM3 (ENSHGLG00000014526) NONO (ENSHGLG00000005550) ITGB1BP2 (ENSHGLG00000015433) ENSHGLG00000050039 ENSHGLG00000050796 ENSHGLG00000014818 ENSHGLG00000031947 ENSHGLG00000049149 #22 ENSHGLG00000040608 ENSHGLG00000007209 ENSHGLG00000042327 ENSHGLG00000050614 ENSHGLG00000008499 ENSHGLG00000034062 ENSHGLG00000006799 ENSHGLG00000037492 ENSHGLG00000050364 ENSHGLG00000047657 RTL5 (ENSHGLG00000043760) NHSL2 (ENSHGLG00000004791) ENSHGLG00000033358 PIN4 (ENSHGLG00000043461) ERCC6L (ENSHGLG00000016594) Lagomorpha ANCESTRAL SPECIES 1 ENSGT00940000162189 ENSGT00940000161606 ENSGT00940000164092 ENSGT00940000163019.b ENSGT00940000165746 ENSGT00940000164168 ENSGT00950000183278 ENSGT00950000183301 ENSGT00940000163498 ENSGT00940000162465 ENSGT00940000154467.b.b.b ##20 ENSGT00940000170498 ENSGT00940000154467.b.a ##20 ENSGT00940000163983 ENSGT00940000162966 ENSGT00940000154197.b.b #22 ENSGT00940000160047 #23 ENSGT00940000161937 #24 ENSGT00940000161521 #26 ENSGT00940000162157 #27 ENSGT00940000159364 #28 ENSGT00940000161581 #29 ENSGT00390000008281 #30 ENSGT00390000003062 #31 ENSGT00940000154716 #32 ENSGT00950000183212.C #33 ENSGT00950000183065.B #34 ENSGT00940000162698 #35 ENSGT00940000160649 #36 ENSGT00390000000698 #37 ENSGT00390000014244 Rabbit MODERN SPECIES 4 ENSOCUG00000026830 ENSOCUG00000033134 ENSOCUG00000025593 ENSOCUG00000032235 ENSOCUG00000031729 ENSOCUG00000033213 C1orf68 (ENSOCUG00000015200) ENSOCUG00000032926 ENSOCUG00000008547 CRNN (ENSOCUG00000011842) ENSOCUG00000011836 ##20 ENSOCUG00000037250 ENSOCUG00000033132 ##20 ENSOCUG00000005205 TCHHL1 (ENSOCUG00000004732) ENSOCUG00000005198 #22 ENSOCUG00000005194 #23 THEM5 (ENSOCUG00000009679) #24 RORC (ENSOCUG00000022907) #26 LINGO4 (ENSOCUG00000001389) #27 ENSOCUG00000001387 #28 OAZ3 (ENSOCUG00000001385) #29 ENSOCUG00000001383 #30 RIIAD1 (ENSOCUG00000021414) #31 CELF3 (ENSOCUG00000003551) #32 SNX27 (ENSOCUG00000007428) #33 TUFT1 (ENSOCUG00000012659) #34 CGN (ENSOCUG00000012640) #35 POGZ (ENSOCUG00000004849) #36 PSMB4 (ENSOCUG00000015257) #37 SELENBP1 (ENSOCUG00000003371) Tree shrew MODERN SPECIES 4986 ENSTBEG00000016491 ENSTBEG00000016356 ENSTBEG00000016141 #21 S100A10 (ENSTBEG00000016106) #22