Euteleostomi ANCESTRAL SPECIES 328 ENSGT00940000159310 #34 ENSGT00390000001680 #33 ENSGT00940000156046 #32 ENSGT00530000063822.a.a #31 ENSGT00940000155379 #30 ENSGT00940000154234.a #29 ENSGT00390000016768 #28 ENSGT00440000034605 #26 ENSGT00940000160574 #25 ENSGT00940000155426 #22 ENSGT00530000063981.b #23 ENSGT00390000006218 #24 Sarcopterygii ANCESTRAL SPECIES 123 ENSGT00390000017249 ENSGT00940000157667 ENSGT00940000158481 ENSGT00940000159662 ENSGT00940000156620 ENSGT00940000164760 ENSGT00390000016821 ENSGT00940000157226 ENSGT00940000154860 ENSGT00390000006196 ENSGT00390000010991 ENSGT00940000157405 ENSGT00390000013149 #20 ENSGT00390000012559 #21 ENSGT00390000008679 ENSGT00940000155426 #22 ENSGT00530000063981.b #23 Tetrapoda ANCESTRAL SPECIES 9 ENSGT00390000017249 ENSGT00940000157667 ENSGT00940000158481 ENSGT00940000159662 ENSGT00940000156620 ENSGT00940000164760 ENSGT00390000016821 ENSGT00940000157226 ENSGT00940000154860 ENSGT00390000006196 ENSGT00390000010991 ENSGT00940000157405 ENSGT00390000013149 #20 ENSGT00390000012559 #21 ENSGT00390000008679 ENSGT00940000155426 #22 ENSGT00530000063981.b #23 ENSGT00390000006218 #24 ENSGT00940000160574 #25 ENSGT00440000034605 #26 ENSGT00390000016768 #28 ENSGT00940000154234.a #29 ENSGT00940000155379 #30 ENSGT00530000063822.a.a #31 ENSGT00940000156046 #32 ENSGT00390000001680 #33 ENSGT00940000159310 #34 ENSGT00940000160980 #35 ENSGT00390000018100 #36 ENSGT00940000157661 ENSGT00390000009140 Amniota ANCESTRAL SPECIES 20 ENSGT00390000017249 ENSGT00940000157667 ENSGT00940000158481 ENSGT00940000159662 ENSGT00940000156620 ENSGT00940000164760 ENSGT00390000016821 ENSGT00940000157226 ENSGT00940000154860 ENSGT00390000006196 ENSGT00390000010991 ENSGT00940000157405 ENSGT00390000013149 #20 ENSGT00390000012559 #21 ENSGT00390000008679 ENSGT00940000155426 #22 ENSGT00530000063981.b #23 ENSGT00390000006218 #24 ENSGT00940000160574 #25 ENSGT00440000034605 #26 ENSGT00390000016768 #28 ENSGT00940000154234.a #29 ENSGT00940000155379 #30 ENSGT00530000063822.a.a #31 ENSGT00940000156046 #32 ENSGT00390000001680 #33 ENSGT00940000159310 #34 ENSGT00940000160980 #35 ENSGT00390000018100 #36 ENSGT00940000157661 ENSGT00390000009140 Sauria ANCESTRAL SPECIES 3 ENSGT00940000157667 ENSGT00940000158481 ENSGT00940000159662 ENSGT00940000156620 ENSGT00940000164760 ENSGT00950000183478 ENSGT00390000016821 ENSGT00940000157226 ENSGT00940000154860 ENSGT00390000006196 ENSGT00390000010991 ENSGT00940000157405 ENSGT00390000013149 #20 ENSGT00390000012559 #21 ENSGT00390000008679 ENSGT00940000155426 #22 ENSGT00530000063981.b #23 ENSGT00390000006218 #24 ENSGT00940000160574 #25 ENSGT00440000034605 #26 ENSGT00390000016768 #28 ENSGT00940000154234.a #29 ENSGT00940000155379 #30 ENSGT00530000063822.a.a #31 ENSGT00940000156046 #32 ENSGT00390000001680 #33 ENSGT00940000159310 #34 ENSGT00940000160980 #35 ENSGT00390000018100 #36 ENSGT00940000157661 ENSGT00390000009140 Lepidosauria ANCESTRAL SPECIES 10 ENSGT00940000157667 ENSGT00940000158481 ENSGT00940000159662 ENSGT00940000156620 ENSGT00940000164760 ENSGT00950000183478 ENSGT00390000016821 ENSGT00940000157226 ENSGT00940000154860 ENSGT00390000006196 ENSGT00390000010991 ENSGT00940000157405 ENSGT00390000013149 #20 ENSGT00390000012559 #21 ENSGT00390000008679 ENSGT00940000155426 #22 ENSGT00530000063981.b #23 ENSGT00390000006218 #24 ENSGT00940000160574 #25 ENSGT00440000034605 #26 ENSGT00390000016768 #28 ENSGT00940000154234.a #29 ENSGT00940000155379 #30 ENSGT00530000063822.a.a #31 ENSGT00940000156046 #32 ENSGT00390000001680 #33 ENSGT00940000159310 #34 ENSGT00940000160980 #35 ENSGT00390000018100 #36 ENSGT00940000157661 ENSGT00390000009140 tuatara MODERN SPECIES 1380 IFTAP (ENSSPUG00000019089) #20 RAG2 (ENSSPUG00000019087) #21 TRAF6 (ENSSPUG00000019081) #22 PRR5L (ENSSPUG00000019066) #23 COMMD9 (ENSSPUG00000019054) #24 LDLRAD3 (ENSSPUG00000019047) #25 TRIM44 (ENSSPUG00000019027) #26 ENSSPUG00000019019 #27 FJX1 (ENSSPUG00000019016) #28 PAMR1 (ENSSPUG00000019008) #29 SLC1A2 (ENSSPUG00000018993) #30 CD44 (ENSSPUG00000018978) #31 PDHX (ENSSPUG00000018966) #32 APIP (ENSSPUG00000018960) #33 EHF (ENSSPUG00000018942) #34 ELF5 (ENSSPUG00000018927) #35 CAT (ENSSPUG00000018915) #36 Episquamata ANCESTRAL SPECIES ENSGT00390000017249 ENSGT00940000157667 ENSGT00940000158481.g ENSGT00940000159662 ENSGT00940000156620 ENSGT00940000164760 ENSGT00950000183478 ENSGT00390000016821 ENSGT00940000157226 ENSGT00940000154860 ENSGT00390000006196 ENSGT00390000010991 ENSGT00940000157405 ENSGT00390000012559 #21 ENSGT00390000008679 ENSGT00940000155426 #22 ENSGT00530000063981.b #23 ENSGT00390000006218 #24 ENSGT00940000160574 #25 ENSGT00440000034605 #26 ENSGT00390000016768 #28 ENSGT00940000154234.a #29 ENSGT00940000155379 #30 ENSGT00530000063822.a.a #31 ENSGT00940000156046 #32 ENSGT00390000001680 #33 ENSGT00940000159310 #34 ENSGT00940000160980 #35 ENSGT00390000018100 #36 ENSGT00940000157661 ENSGT00390000009140 Laterata ANCESTRAL SPECIES 2 ENSGT00940000159837 ENSGT00390000017249 ENSGT00940000157667 ENSGT00940000158481.g ENSGT00940000159662 ENSGT00940000156620 ENSGT00940000164760 ENSGT00390000016821 ENSGT00940000157226 ENSGT00940000154860 ENSGT00390000006196 ENSGT00390000010991 ENSGT00940000157405 ENSGT00390000012559 #21 ENSGT00390000008679 ENSGT00940000155426 #22 ENSGT00530000063981.b #23 ENSGT00390000006218 #24 ENSGT00940000160574 #25 ENSGT00440000034605 #26 ENSGT00390000016768 #28 ENSGT00940000154234.a #29 ENSGT00940000155379 #30 ENSGT00530000063822.a.a #31 ENSGT00940000156046 #32 ENSGT00390000001680 #33 ENSGT00940000159310 #34 ENSGT00940000160980 #35 ENSGT00390000018100 #36 ENSGT00940000157661 ENSGT00390000009140 Argentine black and white tegu MODERN SPECIES 3 C11orf96 (ENSSMRG00000005018) ALKBH3 (ENSSMRG00000005011) HSD17B12 (ENSSMRG00000004956) TTC17 (ENSSMRG00000004923) LSM8 (ENSSMRG00000004921) ATP6V1F (ENSSMRG00000004918) ATP6V1FNB (ENSSMRG00000004909) API5 (ENSSMRG00000004889) ENSSMRG00000004867 ENSSMRG00000004858 ENSSMRG00000004851 LRRC4C (ENSSMRG00000004842) ENSSMRG00000004832 RAG2 (ENSSMRG00000004809) #21 RAG1 (ENSSMRG00000004802) TRAF6 (ENSSMRG00000004731) #22 PRR5L (ENSSMRG00000004714) #23 COMMD9 (ENSSMRG00000004711) #24 LDLRAD3 (ENSSMRG00000004689) #25 TRIM44 (ENSSMRG00000004604) #26 FJX1 (ENSSMRG00000004580) #28 PAMR1 (ENSSMRG00000004579) #29 SLC1A2 (ENSSMRG00000004495) #30 ENSSMRG00000004484 #31 PDHX (ENSSMRG00000004403) #32 APIP (ENSSMRG00000004332) #33 EHF (ENSSMRG00000004321) #34 ELF5 (ENSSMRG00000004308) #35 CAT (ENSSMRG00000004301) #36 ABTB2 (ENSSMRG00000004293) NAT10 (ENSSMRG00000004273) Common wall lizard MODERN SPECIES 15 SLC39A4 (ENSPMRG00000004907) ENSPMRG00000004918 ENSPMRG00000004928 ENSPMRG00000004936 ADCK5 (ENSPMRG00000004955) ENSPMRG00000004962 RECQL4 (ENSPMRG00000004968) ENSPMRG00000004979 ENSPMRG00000004980 LRRC14 (ENSPMRG00000004985) ENSPMRG00000005013 LRRC24 (ENSPMRG00000005018) ENSPMRG00000005023 C8orf82 (ENSPMRG00000005030) ENPP4 (ENSPMRG00000005034) TRAF6 (ENSPMRG00000005038) #22 FUT11 (ENSPMRG00000005042) ENSPMRG00000005047 ENSPMRG00000005056 SNRNP48 (ENSPMRG00000005066) TKTL2 (ENSPMRG00000005093) STX17 (ENSPMRG00000005131) MAFA (ENSPMRG00000005153) ZC3H3 (ENSPMRG00000005185) ENSPMRG00000005236 ENSPMRG00000005463 ENSPMRG00000005466 NAPRT (ENSPMRG00000005477) ENSPMRG00000005506 ENSPMRG00000005513 TIGD5 (ENSPMRG00000005518) Toxicofera ANCESTRAL SPECIES 5 ENSGT00390000017249 ENSGT00940000157667 ENSGT00940000158481.g ENSGT00940000159662 ENSGT00940000156620 ENSGT00940000164760 ENSGT00950000183478 ENSGT00390000016821 ENSGT00940000157226 ENSGT00940000154860 ENSGT00390000006196 ENSGT00390000010991 ENSGT00940000157405 ENSGT00390000012559 #21 ENSGT00390000008679 ENSGT00940000155426 #22 ENSGT00530000063981.b #23 ENSGT00390000006218 #24 ENSGT00940000160574 #25 ENSGT00390000016768 #28 ENSGT00940000154234.a #29 ENSGT00940000155379 #30 ENSGT00530000063822.a.a #31 ENSGT00940000156046 #32 ENSGT00390000001680 #33 ENSGT00940000159310 #34 ENSGT00940000160980 #35 ENSGT00390000018100 #36 ENSGT00940000157661 ENSGT00390000009140 ENSGT00940000153438.a Elapidae ANCESTRAL SPECIES 3 ENSGT00390000017249 ENSGT00940000157667 ENSGT00940000158481.g ENSGT00940000159662 ENSGT00940000156620 ENSGT00940000164760 ENSGT00950000183478 ENSGT00390000016821 ENSGT00940000157226 ENSGT00940000154860 ENSGT00390000006196 ENSGT00390000010991 ENSGT00940000157405 ENSGT00390000012559 #21 ENSGT00390000008679 ENSGT00940000155426 #22 ENSGT00530000063981.b #23 ENSGT00390000006218 #24 ENSGT00940000160574 #25 ENSGT00390000016768 #28 ENSGT00940000154234.a #29 ENSGT00940000155379 #30 ENSGT00530000063822.a.a #31 ENSGT00940000156046 #32 ENSGT00390000001680 #33 ENSGT00940000159310 #34 ENSGT00940000160980 #35 ENSGT00390000018100.n #36 ENSGT00390000018100.m #36 ENSGT00940000157661 ENSGT00390000009140 Indian cobra MODERN SPECIES TSPAN18 (ENSNNAG00000010573) ENSNNAG00000010552 ALX4 (ENSNNAG00000010499) EXT2 (ENSNNAG00000010463) ENSNNAG00000010452 ENSNNAG00000010340 ENSNNAG00000010425 C11orf96 (ENSNNAG00000010307) ALKBH3 (ENSNNAG00000010286) HSD17B12 (ENSNNAG00000010264) TTC17 (ENSNNAG00000009255) API5 (ENSNNAG00000009155) LRRC4C (ENSNNAG00000009141) RAG2 (ENSNNAG00000009131) #21 RAG1 (ENSNNAG00000009122) TRAF6 (ENSNNAG00000009096) #22 ENSNNAG00000009086 PRR5L (ENSNNAG00000008974) #23 COMMD9 (ENSNNAG00000008937) #24 LDLRAD3 (ENSNNAG00000008866) #25 ENSNNAG00000008809 PAMR1 (ENSNNAG00000008663) #29 SLC1A2 (ENSNNAG00000008116) #30 ENSNNAG00000008038 #31 PDHX (ENSNNAG00000007989) #32 APIP (ENSNNAG00000007952) #33 EHF (ENSNNAG00000007936) #34 ELF5 (ENSNNAG00000007913) #35 ENSNNAG00000007866 #36 ENSNNAG00000007572 #36 ABTB2 (ENSNNAG00000007462) Elapidae_a ANCESTRAL SPECIES 4 ENSGT00940000159837 ENSGT00390000017249 ENSGT00940000157667 ENSGT00940000158481.g ENSGT00940000159662 ENSGT00940000156620 ENSGT00940000164760 ENSGT00390000016821 ENSGT00940000157226 ENSGT00940000154860 ENSGT00390000006196 ENSGT00390000010991 ENSGT00940000157405 ENSGT00390000012559 #21 ENSGT00390000008679 ENSGT00940000155426 #22 ENSGT00530000063981.b #23 ENSGT00390000006218 #24 ENSGT00940000160574 #25 ENSGT00390000016768 #28 ENSGT00940000154234.a #29 ENSGT00940000155379 #30 ENSGT00530000063822.a.a #31 ENSGT00940000156046 #32 ENSGT00390000001680 #33 ENSGT00940000159310 #34 ENSGT00940000160980 #35 ENSGT00390000018100.n #36 ENSGT00390000018100.m #36 ENSGT00940000157661 ENSGT00390000009140 Acanthophiinae ANCESTRAL SPECIES 6 ENSGT00390000017249 ENSGT00940000157667 ENSGT00940000158481.g ENSGT00940000159662 ENSGT00940000156620 ENSGT00940000164760 ENSGT00390000016821 ENSGT00940000157226 ENSGT00940000154860 ENSGT00990000214222 ENSGT00390000006196 ENSGT00390000010991 ENSGT00940000157405 ENSGT00390000012559 #21 ENSGT00390000008679 ENSGT00940000155426 #22 ENSGT00530000063981.b #23 ENSGT00390000006218 #24 ENSGT00940000160574 #25 ENSGT00390000016768 #28 ENSGT00940000154234.a #29 ENSGT00940000155379 #30 ENSGT00530000063822.a.a #31 ENSGT00940000156046 #32 ENSGT00390000001680 #33 ENSGT00940000159310 #34 ENSGT00940000160980 #35 ENSGT00390000018100.n #36 ENSGT00390000018100.m #36 ENSGT00940000157661 ENSGT00390000009140 Eastern brown snake MODERN SPECIES 1 PRDM11 (ENSPTXG00000008699) TP53I11 (ENSPTXG00000008698) TSPAN18 (ENSPTXG00000008697) ENSPTXG00000008696 ALX4 (ENSPTXG00000008695) EXT2 (ENSPTXG00000008693) ENSPTXG00000008692 C11orf96 (ENSPTXG00000008691) ALKBH3 (ENSPTXG00000008690) ENSPTXG00000008689 TTC17 (ENSPTXG00000008686) API5 (ENSPTXG00000008685) LRRC4C (ENSPTXG00000008684) RAG2 (ENSPTXG00000008683) #21 RAG1 (ENSPTXG00000008682) TRAF6 (ENSPTXG00000008681) #22 PRR5L (ENSPTXG00000008680) #23 COMMD9 (ENSPTXG00000008679) #24 LDLRAD3 (ENSPTXG00000008678) #25 FJX1 (ENSPTXG00000008677) #28 PAMR1 (ENSPTXG00000008676) #29 SLC1A2 (ENSPTXG00000008672) #30 CD44 (ENSPTXG00000008671) #31 PDHX (ENSPTXG00000008669) #32 APIP (ENSPTXG00000008668) #33 EHF (ENSPTXG00000008667) #34 ELF5 (ENSPTXG00000008666) #35 ENSPTXG00000007368 #36 ENSPTXG00000007359 #36 ABTB2 (ENSPTXG00000007354) NAT10 (ENSPTXG00000007352) Mainland tiger snake MODERN SPECIES 9 ENSNSUG00000008730 ALX4 (ENSNSUG00000008731) EXT2 (ENSNSUG00000008732) ENSNSUG00000008869 C11orf96 (ENSNSUG00000008870) ALKBH3 (ENSNSUG00000008871) HSD17B12 (ENSNSUG00000008872) ENSNSUG00000008873 TTC17 (ENSNSUG00000008875) API5 (ENSNSUG00000008963) ENSNSUG00000008964 LRRC4C (ENSNSUG00000008965) ENSNSUG00000008966 RAG2 (ENSNSUG00000008967) #21 RAG1 (ENSNSUG00000008968) TRAF6 (ENSNSUG00000008969) #22 PRR5L (ENSNSUG00000008970) #23 COMMD9 (ENSNSUG00000008978) #24 LDLRAD3 (ENSNSUG00000008979) #25 FJX1 (ENSNSUG00000008980) #28 PAMR1 (ENSNSUG00000008981) #29 SLC1A2 (ENSNSUG00000008983) #30 CD44 (ENSNSUG00000009221) #31 PDHX (ENSNSUG00000009222) #32 APIP (ENSNSUG00000009235) #33 EHF (ENSNSUG00000009236) #34 ELF5 (ENSNSUG00000009237) #35 ENSNSUG00000009259 #36 ENSNSUG00000009263 #36 ABTB2 (ENSNSUG00000009269) NAT10 (ENSNSUG00000009284) Blue-lipped sea krait MODERN SPECIES 7417 TRAF6 (ENSLLTG00000010364) #22 PRR5L (ENSLLTG00000010388) #23 Lizard MODERN SPECIES ENSACAG00000028334 ENSACAG00000039353 ENSACAG00000036311 ENSACAG00000042258 ENSACAG00000035241 ENSACAG00000037078 ENSACAG00000038190 ENSACAG00000029279 ENSACAG00000037464 ENSACAG00000040924 ENSACAG00000034792 ENSACAG00000044911 ENSACAG00000045231 RAG2 (ENSACAG00000005102) #21 RAG1 (ENSACAG00000005106) TRAF6 (ENSACAG00000040141) #22 PRR5L (ENSACAG00000005141) #23 COMMD9 (ENSACAG00000043977) #24 LDLRAD3 (ENSACAG00000005180) #25 ENSACAG00000038756 ENSACAG00000039043 ENSACAG00000042401 ENSACAG00000044094 TRIM44 (ENSACAG00000028675) #26 ENSACAG00000004544 #29 ENSACAG00000041619 #29 SLC1A2 (ENSACAG00000004365) #30 ENSACAG00000044506 #31 ENSACAG00000036690 #31 ENSACAG00000016081 FGF3 (ENSACAG00000040483) Archelosauria ANCESTRAL SPECIES 2 ENSGT00940000157667 ENSGT00940000158481 ENSGT00940000159662 ENSGT00940000156620 ENSGT00940000164760 ENSGT00950000183478 ENSGT00390000016821 ENSGT00940000157226 ENSGT00940000154860 ENSGT00390000006196 ENSGT00390000010991 ENSGT00940000157405 ENSGT00390000013149 #20 ENSGT00390000012559 #21 ENSGT00390000008679 ENSGT00940000155426 #22 ENSGT00530000063981.b #23 ENSGT00390000006218 #24 ENSGT00940000160574 #25 ENSGT00440000034605 #26 ENSGT00390000016768 #28 ENSGT00940000154234.a #29 ENSGT00940000155379 #30 ENSGT00530000063822.a.a #31 ENSGT00940000156046 #32 ENSGT00390000001680 #33 ENSGT00940000159310 #34 ENSGT00940000160980 #35 ENSGT00390000018100 #36 ENSGT00940000157661 ENSGT00390000009140 Archosauria ANCESTRAL SPECIES 5 ENSGT00940000157667 ENSGT00940000158481 ENSGT00940000159662 ENSGT00940000156620 ENSGT00940000164760 ENSGT00950000183478 ENSGT00390000016821 ENSGT00940000157226 ENSGT00940000154860 ENSGT00390000006196 ENSGT00390000010991 ENSGT00940000157405 ENSGT00390000013149 #20 ENSGT00390000012559 #21 ENSGT00390000008679 ENSGT00940000155426 #22 ENSGT00530000063981.b #23 ENSGT00390000006218 #24 ENSGT00940000160574 #25 ENSGT00440000034605 #26 ENSGT00390000016768 #28 ENSGT00940000154234.a #29 ENSGT00940000155379 #30 ENSGT00530000063822.a.a #31 ENSGT00940000156046 #32 ENSGT00390000001680 #33 ENSGT00940000159310 #34 ENSGT00940000160980 #35 ENSGT00390000018100 #36 ENSGT00940000157661 ENSGT00390000009140 Aves ANCESTRAL SPECIES 2 ENSGT00940000157667 ENSGT00940000158481 ENSGT00940000159662 ENSGT00940000156620 ENSGT00940000164760 ENSGT00950000183478 ENSGT00390000016821 ENSGT00940000157226 ENSGT00940000154860 ENSGT00390000006196 ENSGT00390000010991 ENSGT00940000157405 ENSGT00390000013149 #20 ENSGT00390000012559 #21 ENSGT00390000008679 ENSGT00940000155426 #22 ENSGT00530000063981.b #23 ENSGT00390000006218 #24 ENSGT00940000160574 #25 ENSGT00390000016768 #28 ENSGT00940000154234.a #29 ENSGT00940000155379 #30 ENSGT00530000063822.a.a #31 ENSGT00940000156046 #32 ENSGT00390000001680 #33 ENSGT00940000159310 #34 ENSGT00940000160980 #35 ENSGT00390000018100 #36 ENSGT00940000157661 ENSGT00390000009140 ENSGT00940000153438.a Neognathae ANCESTRAL SPECIES 4 ENSGT00940000157667 ENSGT00940000158481 ENSGT00940000159662 ENSGT00940000156620 ENSGT00940000164760 ENSGT00950000183478 ENSGT00390000016821 ENSGT00940000157226 ENSGT00940000154860 ENSGT00390000006196 ENSGT00390000010991 ENSGT00940000157405 ENSGT00390000013149 #20 ENSGT00390000012559 #21 ENSGT00390000008679 ENSGT00940000155426 #22 ENSGT00530000063981.b #23 ENSGT00390000006218 #24 ENSGT00940000160574 #25 ENSGT00390000016768 #28 ENSGT00940000154234.a #29 ENSGT00940000155379 #30 ENSGT00530000063822.a.a #31 ENSGT00940000156046 #32 ENSGT00390000001680 #33 ENSGT00940000159310 #34 ENSGT00940000160980 #35 ENSGT00390000018100 #36 ENSGT00940000157661 ENSGT00390000009140 ENSGT00940000153438.a Galloanserae ANCESTRAL SPECIES 4 ENSGT00390000017249 ENSGT00940000157667 ENSGT00940000158481 ENSGT00940000159662 ENSGT00940000156620 ENSGT00940000164760 ENSGT00390000016821 ENSGT00940000157226 ENSGT00940000154860 ENSGT00390000006196 ENSGT00390000010991 ENSGT00940000157405 ENSGT00390000013149 #20 ENSGT00390000012559 #21 ENSGT00390000008679 ENSGT00940000155426 #22 ENSGT00530000063981.b #23 ENSGT00390000006218 #24 ENSGT00940000160574 #25 ENSGT00960000189471 ENSGT00390000016768 #28 ENSGT00940000154234.a #29 ENSGT00940000155379 #30 ENSGT00530000063822.a.a #31 ENSGT00940000156046 #32 ENSGT00390000001680 #33 ENSGT00940000159310 #34 ENSGT00940000160980 #35 ENSGT00390000018100 #36 ENSGT00940000157661 ENSGT00390000009140 Anatidae ANCESTRAL SPECIES 50 ENSGT00390000017249 ENSGT00940000157667 ENSGT00940000158481 ENSGT00940000159662 ENSGT00940000156620 ENSGT00940000164760 ENSGT00390000016821 ENSGT00940000157226 ENSGT00940000154860 ENSGT00390000006196 ENSGT00390000010991 ENSGT00940000157405 ENSGT00390000013149 #20 ENSGT00390000012559 #21 ENSGT00390000008679 ENSGT00940000155426 #22 ENSGT00530000063981.b #23 ENSGT00390000006218 #24 ENSGT00940000160574 #25 ENSGT00960000189471 ENSGT00390000016768 #28 ENSGT00940000154234.a #29 ENSGT00940000155379 #30 ENSGT00530000063822.a.a #31 ENSGT00940000156046 #32 ENSGT00390000001680 #33 ENSGT00940000159310 #34 ENSGT00940000160980 #35 ENSGT00390000018100 #36 ENSGT00940000157661 ENSGT00390000009140 Pink-footed goose MODERN SPECIES 39 TSPAN18 (ENSABRG00000017662) CD82 (ENSABRG00000017668) ALX4 (ENSABRG00000017675) EXT2 (ENSABRG00000017677) ENSABRG00000017680 C11orf96 (ENSABRG00000017690) ALKBH3 (ENSABRG00000017692) HSD17B12 (ENSABRG00000017694) TTC17 (ENSABRG00000017698) API5 (ENSABRG00000017703) LRRC4C (ENSABRG00000017724) ENSABRG00000017736 IFTAP (ENSABRG00000017742) #20 RAG2 (ENSABRG00000017743) #21 RAG1 (ENSABRG00000017745) TRAF6 (ENSABRG00000017746) #22 PRR5L (ENSABRG00000017749) #23 COMMD9 (ENSABRG00000017756) #24 LDLRAD3 (ENSABRG00000017763) #25 ENSABRG00000017769 FJX1 (ENSABRG00000017771) #28 PAMR1 (ENSABRG00000017780) #29 SLC1A2 (ENSABRG00000017782) #30 CD44 (ENSABRG00000017785) #31 PDHX (ENSABRG00000017796) #32 APIP (ENSABRG00000017800) #33 EHF (ENSABRG00000017802) #34 ELF5 (ENSABRG00000017804) #35 CAT (ENSABRG00000017805) #36 ABTB2 (ENSABRG00000017808) NAT10 (ENSABRG00000017812) Duck MODERN SPECIES 23 ALX4 (ENSAPLG00000007118) EXT2 (ENSAPLG00000007139) ENSAPLG00000007401 C11orf96 (ENSAPLG00000026568) ALKBH3 (ENSAPLG00000019115) HSD17B12 (ENSAPLG00000026765) TTC17 (ENSAPLG00000007273) API5 (ENSAPLG00000008406) ENSAPLG00000030081 LRRC4C (ENSAPLG00000001447) ENSAPLG00000018386 ENSAPLG00000023896 IFTAP (ENSAPLG00000013519) #20 RAG2 (ENSAPLG00000011769) #21 RAG1 (ENSAPLG00000011756) TRAF6 (ENSAPLG00000013488) #22 PRR5L (ENSAPLG00000013479) #23 COMMD9 (ENSAPLG00000021527) #24 LDLRAD3 (ENSAPLG00000013350) #25 ENSAPLG00000029093 FJX1 (ENSAPLG00000019807) #28 PAMR1 (ENSAPLG00000012925) #29 SLC1A2 (ENSAPLG00000012571) #30 CD44 (ENSAPLG00000012207) #31 PDHX (ENSAPLG00000011686) #32 APIP (ENSAPLG00000011642) #33 EHF (ENSAPLG00000011349) #34 ELF5 (ENSAPLG00000011073) #35 CAT (ENSAPLG00000010432) #36 ABTB2 (ENSAPLG00000008248) NAT10 (ENSAPLG00000007638) Phasianidae ANCESTRAL SPECIES 4 ENSGT00390000017249 ENSGT00940000157667.e ENSGT00940000158481 ENSGT00940000159662 ENSGT00940000156620.m ENSGT00940000164760 ENSGT00390000016821 ENSGT00940000157226 ENSGT00940000154860 ENSGT00390000006196 ENSGT00390000010991 ENSGT00940000157405 ENSGT00390000013149 #20 ENSGT00390000012559 #21 ENSGT00390000008679 ENSGT00940000155426 #22 ENSGT00530000063981.b #23 ENSGT00390000006218 #24 ENSGT00940000160574 #25 ENSGT00960000189471 ENSGT00390000016768 #28 ENSGT00940000154234.a #29 ENSGT00940000155379 #30 ENSGT00530000063822.a.a #31 ENSGT00940000156046 #32 ENSGT00390000001680 #33 ENSGT00940000159310 #34 ENSGT00940000160980 #35 ENSGT00390000018100 #36 ENSGT00940000157661 ENSGT00390000009140 Phasianidae_b ANCESTRAL SPECIES 3 ENSGT00940000159837.n ENSGT00390000017249 ENSGT00940000157667.e ENSGT00940000158481 ENSGT00940000159662 ENSGT00940000156620.m ENSGT00940000164760 ENSGT00940000157226 ENSGT00940000154860 ENSGT00390000006196.c ENSGT00390000010991 ENSGT00940000157405 ENSGT00390000013149 #20 ENSGT00390000012559 #21 ENSGT00390000008679 ENSGT00940000155426 #22 ENSGT00530000063981.b #23 ENSGT00390000006218 #24 ENSGT00940000160574 #25 ENSGT00960000189471 ENSGT00390000016768 #28 ENSGT00940000154234.a #29 ENSGT00940000155379 #30 ENSGT00530000063822.a.a #31 ENSGT00940000156046 #32 ENSGT00390000001680 #33 ENSGT00940000159310 #34 ENSGT00940000160980 #35 ENSGT00390000018100 #36 ENSGT00940000157661 ENSGT00390000009140 Turkey MODERN SPECIES 25 ENSMGAG00000011342 ENSMGAG00000017641 ENSMGAG00000011374 ENSMGAG00000022971 ENSMGAG00000011386 ENSMGAG00000019204 ENSMGAG00000018057 ENSMGAG00000019331 ENSMGAG00000011380 ENSMGAG00000011426 ENSMGAG00000011407 LRRC4C (ENSMGAG00000015799) IFTAP (ENSMGAG00000010409) #20 RAG2 (ENSMGAG00000015796) #21 RAG1 (ENSMGAG00000015794) TRAF6 (ENSMGAG00000010397) #22 PRR5L (ENSMGAG00000010386) #23 COMMD9 (ENSMGAG00000010379) #24 LDLRAD3 (ENSMGAG00000010377) #25 PAMR1 (ENSMGAG00000010360) #29 SLC1A2 (ENSMGAG00000010336) #30 CD44 (ENSMGAG00000010318) #31 PDHX (ENSMGAG00000010298) #32 APIP (ENSMGAG00000010290) #33 EHF (ENSMGAG00000010275) #34 ELF5 (ENSMGAG00000010265) #35 CAT (ENSMGAG00000010242) #36 ABTB2 (ENSMGAG00000010227) NAT10 (ENSMGAG00000010206) CAPRIN1 (ENSMGAG00000010122) LMO2 (ENSMGAG00000010192) Chicken MODERN SPECIES 34 PRDM11 (ENSGALG00010021738) TP53I11 (ENSGALG00010021721) TSPAN18 (ENSGALG00010021714) CD82 (ENSGALG00010021703) ALX4 (ENSGALG00010019838) EXT2 (ENSGALG00010019800) ENSGALG00010019670 ALKBH3 (ENSGALG00010019592) HSD17B12 (ENSGALG00010019546) TTC17 (ENSGALG00010021074) API5 (ENSGALG00010021048) LRRC4C (ENSGALG00010023696) C11orf74 (ENSGALG00010025248) #20 RAG2 (ENSGALG00010025239) #21 RAG1 (ENSGALG00010025211) TRAF6 (ENSGALG00010025204) #22 PRR5L (ENSGALG00010025190) #23 COMMD9 (ENSGALG00010025170) #24 LDLRAD3 (ENSGALG00010025163) #25 ENSGALG00010025143 FJX1 (ENSGALG00010026537) #28 PAMR1 (ENSGALG00010025127) #29 SLC1A2 (ENSGALG00010025067) #30 CD44 (ENSGALG00010024974) #31 APIP (ENSGALG00010024945) #33 PDHX (ENSGALG00010024941) #32 EHF (ENSGALG00010024936) #34 ELF5 (ENSGALG00010024926) #35 CAT (ENSGALG00010024911) #36 ABTB2 (ENSGALG00010024886) NAT10 (ENSGALG00010024880) Japanese quail MODERN SPECIES 23 PRDM11 (ENSCJPG00005010830) TP53I11 (ENSCJPG00005010827) TSPAN18 (ENSCJPG00005010826) CD82 (ENSCJPG00005010825) ALX4 (ENSCJPG00005010823) EXT2 (ENSCJPG00005010822) ENSCJPG00005010821 C11orf96 (ENSCJPG00005010820) ALKBH3 (ENSCJPG00005010819) HSD17B12 (ENSCJPG00005010818) TTC17 (ENSCJPG00005010813) API5 (ENSCJPG00005010812) LRRC4C (ENSCJPG00005010806) IFTAP (ENSCJPG00005010802) #20 RAG1 (ENSCJPG00005010801) TRAF6 (ENSCJPG00005010800) #22 PRR5L (ENSCJPG00005010799) #23 ENSCJPG00005010797 ENSCJPG00005010796 KCNC1 (ENSCJPG00005010792) SERGEF (ENSCJPG00005010791) TPH1 (ENSCJPG00005010780) SAAL1 (ENSCJPG00005010779) ENSCJPG00005010778 HPS5 (ENSCJPG00005010777) GTF2H1 (ENSCJPG00005010775) LDHA (ENSCJPG00005010774) TSG101 (ENSCJPG00005010773) ENSCJPG00005010772 SPTY2D1 (ENSCJPG00005010771) TMEM86A (ENSCJPG00005010770) Neognathae_b ANCESTRAL SPECIES 6 ENSGT00940000157667 ENSGT00940000158481 ENSGT00940000159662 ENSGT00940000156620 ENSGT00940000164760 ENSGT00950000183478 ENSGT00390000016821 ENSGT00940000157226 ENSGT00940000154860 ENSGT00390000006196 ENSGT00390000010991 ENSGT00940000157405 ENSGT00390000013149 #20 ENSGT00390000012559 #21 ENSGT00390000008679 ENSGT00940000155426 #22 ENSGT00530000063981.b #23 ENSGT00390000006218 #24 ENSGT00940000160574 #25 ENSGT00390000016768 #28 ENSGT00940000154234.a #29 ENSGT00940000155379 #30 ENSGT00530000063822.a.a #31 ENSGT00940000156046 #32 ENSGT00390000001680 #33 ENSGT00940000159310 #34 ENSGT00940000160980 #35 Passeriformes ANCESTRAL SPECIES 5 ENSGT00390000017249 ENSGT00940000157667 ENSGT00940000158481 ENSGT00940000159662 ENSGT00940000156620 ENSGT00940000164760 ENSGT00390000016821 ENSGT00940000157226 ENSGT00940000154860 ENSGT00390000006196 ENSGT00390000010991 ENSGT00940000157405 ENSGT00390000013149 #20 ENSGT00390000012559 #21 ENSGT00390000008679 ENSGT00940000155426 #22 ENSGT00530000063981.b #23 ENSGT00390000006218 #24 ENSGT00940000160574 #25 ENSGT00390000016768 #28 ENSGT00940000154234.a #29 ENSGT00940000155379 #30 ENSGT00530000063822.a.a #31 ENSGT00940000156046 #32 ENSGT00390000001680 #33 ENSGT00940000159310 #34 ENSGT00940000160980 #35 ENSGT01060000248595.b.a.b.a ENSGT00390000009663 ENSGT00390000009899.a.d ENSGT00940000156574.C Passeriformes_d ANCESTRAL SPECIES 5 ENSGT00390000017249 ENSGT00940000157667 ENSGT00940000158481 ENSGT00940000159662 ENSGT00940000156620 ENSGT00940000164760 ENSGT00390000016821 ENSGT00940000157226 ENSGT00940000154860 ENSGT00390000006196 ENSGT00390000010991 ENSGT00940000157405 ENSGT00390000013149 #20 ENSGT00390000012559 #21 ENSGT00390000008679 ENSGT00940000155426 #22 ENSGT00530000063981.b #23 ENSGT00390000006218 #24 ENSGT00940000160574 #25 ENSGT00960000189471 ENSGT00940000154234.a #29 ENSGT00940000155379 #30 ENSGT00530000063822.a.a #31 ENSGT00940000156046 #32 ENSGT00390000001680 #33 ENSGT00940000159310 #34 ENSGT00940000160980 #35 ENSGT01060000248595.b.a.b.a ENSGT00390000009663 ENSGT00390000009899.a.d ENSGT00940000156574.C Passeriformes_g ANCESTRAL SPECIES ENSGT00390000017249 ENSGT00940000157667 ENSGT00940000158481 ENSGT00940000159662 ENSGT00940000156620 ENSGT00940000164760 ENSGT00390000016821 ENSGT00940000157226 ENSGT00940000154860 ENSGT00390000006196 ENSGT00390000010991 ENSGT00940000157405 ENSGT00390000013149 #20 ENSGT00390000012559 #21 ENSGT00390000008679 ENSGT00940000155426 #22 ENSGT00530000063981.b #23 ENSGT00390000006218 #24 ENSGT00940000160574 #25 ENSGT00960000189471 ENSGT00940000154234.a #29 ENSGT00940000155379 #30 ENSGT00530000063822.a.a #31 ENSGT00940000156046 #32 ENSGT00390000001680 #33 ENSGT00940000159310 #34 ENSGT01060000248595.b.a.b.a ENSGT00390000009663 ENSGT00390000009899.a.d ENSGT00940000156574.C ENSGT00940000153377.B Passeroidea ANCESTRAL SPECIES 1 ENSGT00390000017249 ENSGT00940000157667 ENSGT00940000158481 ENSGT00940000159662 ENSGT00940000156620 ENSGT00940000164760 ENSGT00390000016821 ENSGT00940000157226 ENSGT00940000154860 ENSGT00390000006196 ENSGT00390000010991 ENSGT00940000157405 ENSGT00390000013149 #20 ENSGT00390000012559 #21 ENSGT00390000008679 ENSGT00940000155426 #22 ENSGT00530000063981.b #23 ENSGT00390000006218 #24 ENSGT00940000160574 #25 ENSGT00940000154234.a #29 ENSGT00940000155379 #30 ENSGT00530000063822.a.a #31 ENSGT00940000156046 #32 ENSGT00390000001680 #33 ENSGT00940000159310 #34 ENSGT01060000248595.b.a.b.a ENSGT00390000009663 ENSGT00390000009899.a.d ENSGT00940000156574.C ENSGT00940000153377.B ENSGT00940000156431 Common canary MODERN SPECIES 3 ENSSCAG00000003478 TP53I11 (ENSSCAG00000003483) TSPAN18 (ENSSCAG00000003489) CD82 (ENSSCAG00000003496) ALX4 (ENSSCAG00000003511) EXT2 (ENSSCAG00000003516) ENSSCAG00000003525 ALKBH3 (ENSSCAG00000003531) HSD17B12 (ENSSCAG00000003538) TTC17 (ENSSCAG00000003561) API5 (ENSSCAG00000003585) LRRC4C (ENSSCAG00000003606) IFTAP (ENSSCAG00000003620) #20 RAG2 (ENSSCAG00000003622) #21 RAG1 (ENSSCAG00000003627) TRAF6 (ENSSCAG00000003629) #22 PRR5L (ENSSCAG00000003631) #23 COMMD9 (ENSSCAG00000003638) #24 LDLRAD3 (ENSSCAG00000003644) #25 PAMR1 (ENSSCAG00000003670) #29 SLC1A2 (ENSSCAG00000003675) #30 ENSSCAG00000003684 #31 ENSSCAG00000003691 #31 PDHX (ENSSCAG00000003711) #32 APIP (ENSSCAG00000003723) #33 EHF (ENSSCAG00000003728) #34 CPT1A (ENSSCAG00000003737) GAL (ENSSCAG00000003743) PPP6R3 (ENSSCAG00000003754) LRP5 (ENSSCAG00000003838) ENSSCAG00000004197 Zebra finch MODERN SPECIES 27 CD82 (ENSTGUG00000010270) ALX4 (ENSTGUG00000022675) EXT2 (ENSTGUG00000010249) ENSTGUG00000010232 C11orf96 (ENSTGUG00000010210) ALKBH3 (ENSTGUG00000010222) HSD17B12 (ENSTGUG00000010212) TTC17 (ENSTGUG00000010175) API5 (ENSTGUG00000010156) ENSTGUG00000023168 LRRC4C (ENSTGUG00000010154) ENSTGUG00000010152 #20 RAG2 (ENSTGUG00000010148) #21 RAG1 (ENSTGUG00000010147) ENSTGUG00000019722 TRAF6 (ENSTGUG00000023943) #22 PRR5L (ENSTGUG00000010127) #23 COMMD9 (ENSTGUG00000010117) #24 LDLRAD3 (ENSTGUG00000010116) #25 ENSTGUG00000010115 PAMR1 (ENSTGUG00000010108) #29 SLC1A2 (ENSTGUG00000021059) #30 CD44 (ENSTGUG00000010085) #31 PDHX (ENSTGUG00000010068) #32 APIP (ENSTGUG00000026500) #33 EHF (ENSTGUG00000010040) #34 CPT1A (ENSTGUG00000009993) GAL (ENSTGUG00000009968) PPP6R3 (ENSTGUG00000009971) LRP5 (ENSTGUG00000009934) ENSTGUG00000020320 Medium ground finch MODERN SPECIES 15 PRDM11 (ENSGFOG00000006231) TP53I11 (ENSGFOG00000006237) TSPAN18 (ENSGFOG00000006246) CD82 (ENSGFOG00000006256) ALX4 (ENSGFOG00000006267) EXT2 (ENSGFOG00000006274) ENSGFOG00000006309 ALKBH3 (ENSGFOG00000006323) HSD17B12 (ENSGFOG00000006352) TTC17 (ENSGFOG00000006550) API5 (ENSGFOG00000006568) LRRC4C (ENSGFOG00000006584) IFTAP (ENSGFOG00000006589) #20 RAG2 (ENSGFOG00000006600) #21 RAG1 (ENSGFOG00000006622) TRAF6 (ENSGFOG00000006624) #22 PRR5L (ENSGFOG00000006629) #23 COMMD9 (ENSGFOG00000006633) #24 LDLRAD3 (ENSGFOG00000006635) #25 ENSGFOG00000006638 PAMR1 (ENSGFOG00000006647) #29 SLC1A2 (ENSGFOG00000006659) #30 CD44 (ENSGFOG00000006680) #31 PDHX (ENSGFOG00000006697) #32 APIP (ENSGFOG00000006731) #33 EHF (ENSGFOG00000006738) #34 CPT1A (ENSGFOG00000006742) GAL (ENSGFOG00000006756) PPP6R3 (ENSGFOG00000006764) LRP5 (ENSGFOG00000006798) ENSGFOG00000006815 Flycatcher MODERN SPECIES 24 TP53I11 (ENSFALG00000012278) TSPAN18 (ENSFALG00000012281) CD82 (ENSFALG00000012287) ALX4 (ENSFALG00000012294) EXT2 (ENSFALG00000012307) ENSFALG00000012325 C11orf96 (ENSFALG00000026575) ENSFALG00000027931 HSD17B12 (ENSFALG00000012377) TTC17 (ENSFALG00000012400) API5 (ENSFALG00000012414) LRRC4C (ENSFALG00000014357) IFTAP (ENSFALG00000012432) #20 RAG2 (ENSFALG00000014365) #21 RAG1 (ENSFALG00000014372) TRAF6 (ENSFALG00000012435) #22 PRR5L (ENSFALG00000012439) #23 LDLRAD3 (ENSFALG00000025257) #25 PAMR1 (ENSFALG00000012457) #29 SLC1A2 (ENSFALG00000012468) #30 CD44 (ENSFALG00000027438) #31 PDHX (ENSFALG00000012525) #32 APIP (ENSFALG00000026708) #33 EHF (ENSFALG00000025387) #34 ENSFALG00000014378 #35 CPT1A (ENSFALG00000012570) GAL (ENSFALG00000012599) PPP6R3 (ENSFALG00000012628) ENSFALG00000026022 LRP5 (ENSFALG00000012674) ENSFALG00000027419 Great tit MODERN SPECIES 25 TP53I11 (ENSPMJG00000000505) TSPAN18 (ENSPMJG00000000485) CD82 (ENSPMJG00000000467) ALX4 (ENSPMJG00000000438) EXT2 (ENSPMJG00000000379) ENSPMJG00000000356 C11orf96 (ENSPMJG00000000347) ALKBH3 (ENSPMJG00000000332) HSD17B12 (ENSPMJG00000000290) TTC17 (ENSPMJG00000000119) API5 (ENSPMJG00000000083) LRRC4C (ENSPMJG00000010037) ENSPMJG00000010028 #20 RAG2 (ENSPMJG00000010027) #21 RAG1 (ENSPMJG00000010025) TRAF6 (ENSPMJG00000010023) #22 COMMD9 (ENSPMJG00000010021) #24 PRR5L (ENSPMJG00000010019) #23 LDLRAD3 (ENSPMJG00000010000) #25 FJX1 (ENSPMJG00000009999) #28 PAMR1 (ENSPMJG00000009996) #29 SLC1A2 (ENSPMJG00000009957) #30 CD44 (ENSPMJG00000009954) #31 PDHX (ENSPMJG00000009950) #32 APIP (ENSPMJG00000009947) #33 EHF (ENSPMJG00000009945) #34 CPT1A (ENSPMJG00000009938) GAL (ENSPMJG00000009933) PPP6R3 (ENSPMJG00000009913) LRP5 (ENSPMJG00000009906) ENSPMJG00000009902 Neognathae_c ANCESTRAL SPECIES 6 ENSGT00390000017249 ENSGT00940000157667 ENSGT00940000158481 ENSGT00940000159662 ENSGT00940000156620 ENSGT00940000164760 ENSGT00950000183478 ENSGT00390000016821 ENSGT00940000157226 ENSGT00940000154860 ENSGT00390000006196 ENSGT00390000010991 ENSGT00940000157405 ENSGT00390000013149 #20 ENSGT00390000008679 ENSGT00940000155426 #22 ENSGT00530000063981.b #23 ENSGT00390000006218 #24 ENSGT00940000160574 #25 ENSGT00390000016768 #28 ENSGT00940000154234.a #29 ENSGT00940000155379 #30 ENSGT00530000063822.a.a #31 ENSGT00940000156046 #32 ENSGT00390000001680 #33 ENSGT00940000159310 #34 ENSGT00940000160980 #35 Kakapo MODERN SPECIES 21 RCN1 (ENSSHBG00005011763) WT1 (ENSSHBG00005011726) EIF3M (ENSSHBG00005011696) CCDC73 (ENSSHBG00005011670) PRRG4 (ENSSHBG00005011645) QSER1 (ENSSHBG00005011608) DEPDC7 (ENSSHBG00005011577) TCP11L1 (ENSSHBG00005011554) CSTF3 (ENSSHBG00005011527) HIPK3 (ENSSHBG00005011501) C11orf91 (ENSSHBG00005011483) KIAA1549L (ENSSHBG00005010654) SPON1 (ENSSHBG00005010434) SYT9 (ENSSHBG00005010399) OLFML1 (ENSSHBG00005010210) TRAF6 (ENSSHBG00005010177) #22 COMMD9 (ENSSHBG00005000484) #24 LDLRAD3 (ENSSHBG00005000479) #25 PRR5L (ENSSHBG00005000473) #23 FJX1 (ENSSHBG00005000469) #28 PAMR1 (ENSSHBG00005019263) #29 SLC1A2 (ENSSHBG00005019261) #30 ENSSHBG00005019258 #31 PDHX (ENSSHBG00005019256) #32 APIP (ENSSHBG00005019255) #33 EHF (ENSSHBG00005019250) #34 ENSSHBG00005019246 LRP5 (ENSSHBG00005018446) PPP6R3 (ENSSHBG00005018403) GAL (ENSSHBG00005018399) CPT1A (ENSSHBG00005018397) Golden eagle MODERN SPECIES 11 SYT13 (ENSACCG00020004674) PRDM11 (ENSACCG00020004687) TP53I11 (ENSACCG00020004696) TSPAN18 (ENSACCG00020004701) CD82 (ENSACCG00020004713) ALX4 (ENSACCG00020004719) EXT2 (ENSACCG00020004732) ENSACCG00020004761 ALKBH3 (ENSACCG00020004784) HSD17B12 (ENSACCG00020004804) TTC17 (ENSACCG00020004828) API5 (ENSACCG00020004854) LRRC4C (ENSACCG00020004870) IFTAP (ENSACCG00020004876) #20 RAG1 (ENSACCG00020004891) TRAF6 (ENSACCG00020004898) #22 PRR5L (ENSACCG00020004911) #23 COMMD9 (ENSACCG00020004925) #24 LDLRAD3 (ENSACCG00020004933) #25 FJX1 (ENSACCG00020004943) #28 ENSACCG00020004950 ENSACCG00020004954 PAMR1 (ENSACCG00020004986) #29 SLC1A2 (ENSACCG00020005008) #30 ENSACCG00020005027 #31 PDHX (ENSACCG00020005035) #32 APIP (ENSACCG00020005044) #33 EHF (ENSACCG00020005055) #34 ELF5 (ENSACCG00020005066) #35 ENSACCG00020005078 MAP4K3 (ENSACCG00020005104) African ostrich MODERN SPECIES 1069 IFTAP (ENSSCUG00000018810) #20 RAG2 (ENSSCUG00000018809) #21 RAG1 (ENSSCUG00000018808) TRAF6 (ENSSCUG00000018807) #22 PRR5L (ENSSCUG00000018806) #23 COMMD9 (ENSSCUG00000018804) #24 LDLRAD3 (ENSSCUG00000018802) #25 ENSSCUG00000018799 PAMR1 (ENSSCUG00000018797) #29 SLC1A2 (ENSSCUG00000018795) #30 CD44 (ENSSCUG00000018790) #31 PDHX (ENSSCUG00000018780) #32 APIP (ENSSCUG00000018778) #33 EHF (ENSSCUG00000018771) #34 ELF5 (ENSSCUG00000018767) #35 CAT (ENSSCUG00000018763) #36 ABTB2 (ENSSCUG00000018762) NAT10 (ENSSCUG00000018760) CAPRIN1 (ENSSCUG00000018759) Australian saltwater crocodile MODERN SPECIES 64 PRDM11 (ENSCPRG00005011712) TP53I11 (ENSCPRG00005011670) TSPAN18 (ENSCPRG00005011666) CD82 (ENSCPRG00005011637) ALX4 (ENSCPRG00005011563) EXT2 (ENSCPRG00005011390) ENSCPRG00005011338 ALKBH3 (ENSCPRG00005011323) HSD17B12 (ENSCPRG00005011319) TTC17 (ENSCPRG00005011263) API5 (ENSCPRG00005011242) LRRC4C (ENSCPRG00005011233) IFTAP (ENSCPRG00005011211) #20 RAG2 (ENSCPRG00005011203) #21 RAG1 (ENSCPRG00005011199) TRAF6 (ENSCPRG00005011195) #22 PRR5L (ENSCPRG00005011191) #23 COMMD9 (ENSCPRG00005011189) #24 LDLRAD3 (ENSCPRG00005011188) #25 TRIM44 (ENSCPRG00005011181) #26 PAMR1 (ENSCPRG00005011143) #29 SLC1A2 (ENSCPRG00005011036) #30 ENSCPRG00005011010 #31 ENSCPRG00005011008 #31 PDHX (ENSCPRG00005010991) #32 APIP (ENSCPRG00005010986) #33 EHF (ENSCPRG00005010982) #34 ELF5 (ENSCPRG00005010953) #35 CAT (ENSCPRG00005010950) #36 ABTB2 (ENSCPRG00005010800) NAT10 (ENSCPRG00005010567) Cryptodira ANCESTRAL SPECIES 3 ENSGT00940000157667 ENSGT00940000158481 ENSGT00940000159662 ENSGT00940000156620 ENSGT00940000164760 ENSGT00950000183478 ENSGT00390000016821 ENSGT00940000157226 ENSGT00940000154860 ENSGT00390000006196 ENSGT00390000010991 ENSGT00940000157405 ENSGT00390000013149 #20 ENSGT00390000012559 #21 ENSGT00390000008679 ENSGT00940000155426 #22 ENSGT00530000063981.b #23 ENSGT00390000006218 #24 ENSGT00940000160574 #25 ENSGT00960000189471 ENSGT00440000034605 #26 ENSGT00390000016768 #28 ENSGT00940000154234.a #29 ENSGT00940000155379 #30 ENSGT00530000063822.a.a #31 ENSGT00940000156046 #32 ENSGT00390000001680 #33 ENSGT00940000159310 #34 ENSGT00940000160980 #35 ENSGT00390000018100 #36 ENSGT00940000157661 Testudinoidea ANCESTRAL SPECIES 3 ENSGT00940000157667 ENSGT00940000158481 ENSGT00940000159662 ENSGT00940000156620 ENSGT00940000164760 ENSGT00950000183478 ENSGT00390000016821 ENSGT00940000157226 ENSGT00940000154860 ENSGT00390000006196 ENSGT00390000010991 ENSGT00940000157405 ENSGT00390000013149 #20 ENSGT00390000012559 #21 ENSGT00390000008679 ENSGT00940000155426 #22 ENSGT00530000063981.b #23 ENSGT00390000006218 #24 ENSGT00940000160574 #25 ENSGT00440000034605 #26 ENSGT00390000016768 #28 ENSGT00940000154234.a #29 ENSGT00940000155379 #30 ENSGT00530000063822.a.a #31 ENSGT00940000156046 #32 ENSGT00390000001680 #33 ENSGT00940000159310 #34 ENSGT00940000160980 #35 ENSGT00390000018100 #36 ENSGT00940000157661 ENSGT00390000009140 Emydidae ANCESTRAL SPECIES 2 ENSGT00940000157667 ENSGT00940000158481 ENSGT00940000159662 ENSGT00940000156620 ENSGT00940000164760 ENSGT00390000016821 ENSGT00940000157226 ENSGT00990000212297 ENSGT00940000154860 ENSGT00390000006196 ENSGT00390000010991 ENSGT00940000157405 ENSGT00390000013149 #20 ENSGT00390000012559 #21 ENSGT00390000008679 ENSGT00940000155426 #22 ENSGT00530000063981.b #23 ENSGT00390000006218 #24 ENSGT00940000160574 #25 ENSGT00440000034605 #26 ENSGT00390000016768 #28 ENSGT00940000154234.a #29 ENSGT00940000155379 #30 ENSGT00530000063822.a.a #31 ENSGT00940000156046 #32 ENSGT00390000001680 #33 ENSGT00940000159310 #34 ENSGT00940000160980 #35 ENSGT00390000018100 #36 ENSGT00940000157661 ENSGT00390000009140 painted turtle MODERN SPECIES 13 TSPAN18 (ENSCPBG00000012596) CD82 (ENSCPBG00000012593) ALX4 (ENSCPBG00000012590) EXT2 (ENSCPBG00000012585) ENSCPBG00000012580 C11orf96 (ENSCPBG00000012577) ALKBH3 (ENSCPBG00000012575) ENSCPBG00000012573 HSD17B12 (ENSCPBG00000012572) TTC17 (ENSCPBG00000012566) API5 (ENSCPBG00000012564) LRRC4C (ENSCPBG00000012554) IFTAP (ENSCPBG00000012548) #20 RAG2 (ENSCPBG00000012547) #21 RAG1 (ENSCPBG00000012546) TRAF6 (ENSCPBG00000012545) #22 PRR5L (ENSCPBG00000012543) #23 COMMD9 (ENSCPBG00000012542) #24 LDLRAD3 (ENSCPBG00000012541) #25 TRIM44 (ENSCPBG00000012540) #26 FJX1 (ENSCPBG00000012539) #28 PAMR1 (ENSCPBG00000012537) #29 SLC1A2 (ENSCPBG00000012534) #30 CD44 (ENSCPBG00000012532) #31 PDHX (ENSCPBG00000012531) #32 APIP (ENSCPBG00000012530) #33 EHF (ENSCPBG00000012529) #34 ELF5 (ENSCPBG00000012528) #35 CAT (ENSCPBG00000012526) #36 ENSCPBG00000012525 ENSCPBG00000012523 Three-toed box turtle MODERN SPECIES 40 ALX4 (ENSTMTG00000009213) EXT2 (ENSTMTG00000009184) ENSTMTG00000009155 C11orf96 (ENSTMTG00000009151) ENSTMTG00000009140 ALKBH3 (ENSTMTG00000009123) ENSTMTG00000009108 HSD17B12 (ENSTMTG00000009085) TTC17 (ENSTMTG00000009031) API5 (ENSTMTG00000008992) ENSTMTG00000008983 LRRC4C (ENSTMTG00000008975) IFTAP (ENSTMTG00000008963) #20 RAG2 (ENSTMTG00000008953) #21 RAG1 (ENSTMTG00000008950) TRAF6 (ENSTMTG00000008934) #22 PRR5L (ENSTMTG00000008916) #23 COMMD9 (ENSTMTG00000008903) #24 LDLRAD3 (ENSTMTG00000008894) #25 TRIM44 (ENSTMTG00000008878) #26 FJX1 (ENSTMTG00000008863) #28 PAMR1 (ENSTMTG00000008840) #29 SLC1A2 (ENSTMTG00000008810) #30 ENSTMTG00000008780 #31 PDHX (ENSTMTG00000008758) #32 APIP (ENSTMTG00000008745) #33 EHF (ENSTMTG00000008712) #34 ELF5 (ENSTMTG00000008674) #35 CAT (ENSTMTG00000008651) #36 ABTB2 (ENSTMTG00000008508) NAT10 (ENSTMTG00000008472) Testudinidae ANCESTRAL SPECIES 2 ENSGT00940000157667 ENSGT00940000158481 ENSGT00940000159662 ENSGT00940000156620 ENSGT00940000164760 ENSGT00950000183478 ENSGT00390000016821 ENSGT00940000157226 ENSGT00940000154860 ENSGT00390000006196.e ENSGT00390000010991 ENSGT00940000157405 ENSGT00390000013149 #20 ENSGT00390000012559 #21 ENSGT00390000008679 ENSGT00940000155426 #22 ENSGT00530000063981.b #23 ENSGT00390000006218 #24 ENSGT00940000160574 #25 ENSGT00440000034605 #26 ENSGT00390000016768 #28 ENSGT00940000154234.a #29 ENSGT00940000155379 #30 ENSGT00530000063822.a.a #31 ENSGT00940000156046 #32 ENSGT00390000001680 #33 ENSGT00940000159310 #34 ENSGT00940000160980 #35 ENSGT00390000018100 #36 ENSGT00940000157661 ENSGT00390000009140 Goode s thornscrub tortoise MODERN SPECIES 18 TSPAN18 (ENSGEVG00005013791) CD82 (ENSGEVG00005013867) ALX4 (ENSGEVG00005013888) EXT2 (ENSGEVG00005013950) ENSGEVG00005014034 C11orf96 (ENSGEVG00005014097) ALKBH3 (ENSGEVG00005014116) HSD17B12 (ENSGEVG00005014144) TTC17 (ENSGEVG00005014269) API5 (ENSGEVG00005014961) ENSGEVG00005014999 LRRC4C (ENSGEVG00005015025) IFTAP (ENSGEVG00005015044) #20 RAG2 (ENSGEVG00005015067) #21 RAG1 (ENSGEVG00005015081) TRAF6 (ENSGEVG00005015114) #22 PRR5L (ENSGEVG00005015154) #23 COMMD9 (ENSGEVG00005015180) #24 LDLRAD3 (ENSGEVG00005015195) #25 TRIM44 (ENSGEVG00005015266) #26 FJX1 (ENSGEVG00005015321) #28 PAMR1 (ENSGEVG00005015366) #29 SLC1A2 (ENSGEVG00005015528) #30 CD44 (ENSGEVG00005015868) #31 PDHX (ENSGEVG00005015894) #32 APIP (ENSGEVG00005015935) #33 EHF (ENSGEVG00005015957) #34 ELF5 (ENSGEVG00005016024) #35 CAT (ENSGEVG00005016106) #36 ABTB2 (ENSGEVG00005016255) NAT10 (ENSGEVG00005016611) Abingdon island giant tortoise MODERN SPECIES 2305 ENSCABG00000014605 IFTAP (ENSCABG00000014608) #20 RAG2 (ENSCABG00000014609) #21 RAG1 (ENSCABG00000014610) TRAF6 (ENSCABG00000014612) #22 PRR5L (ENSCABG00000014615) #23 COMMD9 (ENSCABG00000014639) #24 LDLRAD3 (ENSCABG00000014643) #25 ENSCABG00000014653 TRIM44 (ENSCABG00000014655) #26 FJX1 (ENSCABG00000014656) #28 PAMR1 (ENSCABG00000014660) #29 SLC1A2 (ENSCABG00000014670) #30 ENSCABG00000015018 #31 Chinese turtle MODERN SPECIES 1173 ENSPSIG00000011971 ALKBH3 (ENSPSIG00000011933) ENSPSIG00000011915 HSD17B12 (ENSPSIG00000011423) TTC17 (ENSPSIG00000011414) API5 (ENSPSIG00000011287) ENSPSIG00000011281 ENSPSIG00000011275 ENSPSIG00000001824 LRRC4C (ENSPSIG00000001820) ENSPSIG00000001816 ENSPSIG00000011231 IFTAP (ENSPSIG00000011179) #20 RAG2 (ENSPSIG00000001813) #21 RAG1 (ENSPSIG00000001811) TRAF6 (ENSPSIG00000011001) #22 PRR5L (ENSPSIG00000010994) #23 COMMD9 (ENSPSIG00000010944) #24 LDLRAD3 (ENSPSIG00000010795) #25 ENSPSIG00000001807 #28 PAMR1 (ENSPSIG00000010368) #29 SLC1A2 (ENSPSIG00000010002) #30 CD44 (ENSPSIG00000009940) #31 PDHX (ENSPSIG00000009051) #32 APIP (ENSPSIG00000008991) #33 EHF (ENSPSIG00000008876) #34 ELF5 (ENSPSIG00000008866) #35 CAT (ENSPSIG00000007418) #36 ENSPSIG00000007397 ABTB2 (ENSPSIG00000009338) NAT10 (ENSPSIG00000006469) Mammalia ANCESTRAL SPECIES 9 ENSGT00940000157667 ENSGT00940000158481 ENSGT00940000159662 ENSGT00940000156620 ENSGT00940000161101 ENSGT00940000164760 ENSGT00390000016821 ENSGT00940000157226 ENSGT00940000154860 ENSGT00390000006196 ENSGT00390000010991 ENSGT00940000157405 ENSGT00390000013149 #20 ENSGT00390000012559 #21 ENSGT00390000008679 ENSGT00940000155426 #22 ENSGT00530000063981.b #23 ENSGT00390000006218 #24 ENSGT00940000160574 #25 ENSGT00440000034605 #26 ENSGT00390000016768 #28 ENSGT00940000154234.a #29 ENSGT00940000155379 #30 ENSGT00530000063822.a.a #31 ENSGT00940000156046 #32 ENSGT00390000001680 #33 ENSGT00940000159310 #34 ENSGT00940000160980 #35 ENSGT00390000018100 #36 ENSGT00940000157661 ENSGT00390000009140 Theria ANCESTRAL SPECIES 8 ENSGT00940000157667 ENSGT00940000158481 ENSGT00940000159662 ENSGT00940000156620 ENSGT00940000161101 ENSGT00940000164760 ENSGT00390000016821 ENSGT00940000157226 ENSGT00940000154860 ENSGT00390000006196 ENSGT00390000010991 ENSGT00940000157405 ENSGT00390000013149 #20 ENSGT00390000012559 #21 ENSGT00390000008679 ENSGT00940000155426 #22 ENSGT00530000063981.b #23 ENSGT00390000006218 #24 ENSGT00940000160574 #25 ENSGT00440000034605 #26 ENSGT00390000016768 #28 ENSGT00940000154234.a #29 ENSGT00940000155379 #30 ENSGT00530000063822.a.a #31 ENSGT00940000156046 #32 ENSGT00390000001680 #33 ENSGT00940000159310 #34 ENSGT00940000160980 #35 ENSGT00390000018100 #36 ENSGT00940000157661 ENSGT00390000009140 Eutheria ANCESTRAL SPECIES 3 ENSGT00940000157667 ENSGT00940000158481 ENSGT00940000159662 ENSGT00940000156620 ENSGT00940000161101 ENSGT00940000162841 ENSGT00390000016821 ENSGT00940000157226 ENSGT00940000154860 ENSGT00390000006196 ENSGT00390000010991 ENSGT00940000157405 ENSGT00390000013149 #20 ENSGT00390000012559 #21 ENSGT00390000008679 ENSGT00940000155426 #22 ENSGT00530000063981.b #23 ENSGT00390000006218 #24 ENSGT00940000160574 #25 ENSGT00440000034605 #26 ENSGT00390000016768 #28 ENSGT00940000154234.a #29 ENSGT00940000155379 #30 ENSGT00530000063822.a.a #31 ENSGT00940000156046 #32 ENSGT00390000001680 #33 ENSGT00940000159310 #34 ENSGT00940000160980 #35 ENSGT00390000018100 #36 ENSGT00940000157661 ENSGT00390000009140 Atlantogenata ANCESTRAL SPECIES 13 ENSGT00940000157667 ENSGT00940000158481 ENSGT00940000159662 ENSGT00940000156620 ENSGT00940000161101 ENSGT00940000162841 ENSGT00390000016821 ENSGT00940000157226 ENSGT00940000154860 ENSGT00390000006196 ENSGT00390000010991 ENSGT00940000157405 ENSGT00390000013149 #20 ENSGT00390000012559 #21 ENSGT00390000008679 ENSGT00940000155426 #22 ENSGT00530000063981.b #23 ENSGT00390000006218 #24 ENSGT00940000160574 #25 ENSGT00440000034605 #26 ENSGT00390000016768 #28 ENSGT00940000154234.a #29 ENSGT00940000155379 #30 ENSGT00530000063822.a.a #31 ENSGT00940000156046 #32 ENSGT00390000001680 #33 ENSGT00940000159310 #34 ENSGT00940000160980 #35 ENSGT00390000018100 #36 ENSGT00940000157661 ENSGT00390000009140 Xenarthra ANCESTRAL SPECIES 985 ENSGT00390000013149 #20 ENSGT00390000012559 #21 ENSGT00390000008679 ENSGT00940000155426 #22 ENSGT00530000063981.b #23 Armadillo MODERN SPECIES 4535 ENSDNOG00000041722 ENSDNOG00000044998 ENSDNOG00000043539 IFTAP (ENSDNOG00000039872) #20 RAG2 (ENSDNOG00000032392) #21 RAG1 (ENSDNOG00000006294) TRAF6 (ENSDNOG00000031700) #22 PRR5L (ENSDNOG00000005900) #23 Sloth MODERN SPECIES 12190 ENSCHOG00000005603 #22 Afrotheria ANCESTRAL SPECIES 16 ENSGT00940000159837 ENSGT00390000017249 ENSGT00940000157667 ENSGT00940000159662 ENSGT00940000156620 ENSGT00940000161101 ENSGT00940000162841 ENSGT00940000157226 ENSGT00940000154860.j ENSGT00390000006196 ENSGT00390000010991 ENSGT00940000157405 ENSGT00390000013149 #20 ENSGT00390000012559 #21 ENSGT00390000008679 ENSGT00940000155426 #22 ENSGT00530000063981.b #23 ENSGT00390000006218 #24 ENSGT00940000160574 #25 ENSGT00440000034605 #26 ENSGT00390000016768 #28 ENSGT00940000154234.a #29 ENSGT00940000155379 #30 ENSGT00530000063822.a.a #31 ENSGT00940000156046 #32 ENSGT00390000001680 #33 ENSGT00940000159310 #34 ENSGT00940000160980 #35 ENSGT00390000018100 #36 ENSGT00940000157661 ENSGT00390000009140 Tenrec MODERN SPECIES 6820 ENSETEG00000013724 TRAF6 (ENSETEG00000013721) #22 Afrotheria_a ANCESTRAL SPECIES 17 ENSGT00940000159837 ENSGT00390000017249 ENSGT00940000157667 ENSGT00940000159662 ENSGT00940000156620 ENSGT00940000161101 ENSGT00940000162841 ENSGT00940000157226 ENSGT00940000154860.j ENSGT00390000006196 ENSGT00390000010991 ENSGT00940000157405 ENSGT00390000013149 #20 ENSGT00390000012559 #21 ENSGT00390000008679 ENSGT00940000155426 #22 ENSGT00530000063981.b #23 ENSGT00390000006218 #24 ENSGT00940000160574 #25 ENSGT00440000034605 #26 ENSGT00390000016768 #28 ENSGT00940000154234.a #29 ENSGT00940000155379 #30 ENSGT00530000063822.a.a #31 ENSGT00940000156046 #32 ENSGT00390000001680 #33 ENSGT00940000159310 #34 ENSGT00940000160980 #35 ENSGT00390000018100 #36 ENSGT00940000157661 ENSGT00390000009140 Hyrax MODERN SPECIES 2534 TRAF6 (ENSPCAG00000012792) #22 PRR5L (ENSPCAG00000012738) #23 Elephant MODERN SPECIES 209 TP53I11 (ENSLAFG00000005709) TSPAN18 (ENSLAFG00000005533) ALX4 (ENSLAFG00000010673) EXT2 (ENSLAFG00000010668) ACCS (ENSLAFG00000010662) ACCSL (ENSLAFG00000014256) ALKBH3 (ENSLAFG00000003441) ENSLAFG00000003439 TTC17 (ENSLAFG00000001692) API5 (ENSLAFG00000001688) ENSLAFG00000028516 LRRC4C (ENSLAFG00000006244) IFTAP (ENSLAFG00000016474) #20 RAG2 (ENSLAFG00000016472) #21 RAG1 (ENSLAFG00000023175) TRAF6 (ENSLAFG00000016463) #22 PRR5L (ENSLAFG00000016459) #23 COMMD9 (ENSLAFG00000001396) #24 LDLRAD3 (ENSLAFG00000017028) #25 TRIM44 (ENSLAFG00000016722) #26 FJX1 (ENSLAFG00000026391) #28 PAMR1 (ENSLAFG00000017692) #29 SLC1A2 (ENSLAFG00000017684) #30 CD44 (ENSLAFG00000017676) #31 PDHX (ENSLAFG00000013165) #32 APIP (ENSLAFG00000013662) #33 EHF (ENSLAFG00000011235) #34 ELF5 (ENSLAFG00000005823) #35 CAT (ENSLAFG00000005810) #36 ABTB2 (ENSLAFG00000030946) NAT10 (ENSLAFG00000012393) Boreoeutheria ANCESTRAL SPECIES 1 ENSGT00940000158481 ENSGT00940000159662 ENSGT00940000156620 ENSGT00940000161101 ENSGT00940000162841 ENSGT00390000016821 ENSGT00940000157226 ENSGT00940000154860 ENSGT00520000059086 ENSGT00390000006196 ENSGT00390000010991 ENSGT00940000157405 ENSGT00390000013149 #20 ENSGT00390000012559 #21 ENSGT00390000008679 ENSGT00940000155426 #22 ENSGT00530000063981.b #23 ENSGT00390000006218 #24 ENSGT00940000160574 #25 ENSGT00440000034605 #26 ENSGT00390000016768 #28 ENSGT00940000154234.a #29 ENSGT00940000155379 #30 ENSGT00530000063822.a.a #31 ENSGT00940000156046 #32 ENSGT00390000001680 #33 ENSGT00940000159310 #34 ENSGT00940000160980 #35 ENSGT00390000018100 #36 ENSGT00940000157661 ENSGT00390000009140 Laurasiatheria ANCESTRAL SPECIES 1 ENSGT00940000158481 ENSGT00940000159662 ENSGT00940000156620 ENSGT00940000161101 ENSGT00940000162841 ENSGT00390000016821 ENSGT00940000157226 ENSGT00940000154860 ENSGT00520000059086 ENSGT00390000006196 ENSGT00390000010991 ENSGT00940000157405 ENSGT00390000013149 #20 ENSGT00390000012559 #21 ENSGT00390000008679 ENSGT00940000155426 #22 ENSGT00530000063981.b #23 ENSGT00390000006218 #24 ENSGT00940000160574 #25 ENSGT00440000034605 #26 ENSGT00390000016768 #28 ENSGT00940000154234.a #29 ENSGT00940000155379 #30 ENSGT00530000063822.a.a #31 ENSGT00940000156046 #32 ENSGT00390000001680 #33 ENSGT00940000159310 #34 ENSGT00940000160980 #35 ENSGT00390000018100 #36 ENSGT00940000157661 ENSGT00390000009140 Eulipotyphla ANCESTRAL SPECIES 634 ENSGT00390000013149 #20 ENSGT00390000008679 ENSGT00940000155426 #22 Hedgehog MODERN SPECIES 6995 TRAF6 (ENSEEUG00000000085) #22 Common shrew MODERN SPECIES 5460 IFTAP (ENSSARG00000010996) #20 RAG1 (ENSSARG00000010950) TRAF6 (ENSSARG00000010940) #22 Laurasiatheria_a ANCESTRAL SPECIES 1 ENSGT00940000158481 ENSGT00940000159662 ENSGT00940000156620 ENSGT00940000161101 ENSGT00940000162841 ENSGT00390000016821 ENSGT00940000157226 ENSGT00940000154860 ENSGT00520000059086 ENSGT00390000006196 ENSGT00390000010991 ENSGT00940000157405 ENSGT00390000013149 #20 ENSGT00390000012559 #21 ENSGT00390000008679 ENSGT00940000155426 #22 ENSGT00530000063981.b #23 ENSGT00390000006218 #24 ENSGT00940000160574 #25 ENSGT00440000034605 #26 ENSGT00390000016768 #28 ENSGT00940000154234.a #29 ENSGT00940000155379 #30 ENSGT00530000063822.a.a #31 ENSGT00940000156046 #32 ENSGT00390000001680 #33 ENSGT00940000159310 #34 ENSGT00940000160980 #35 ENSGT00390000018100 #36 ENSGT00940000157661 ENSGT00390000009140 Artiodactyla ANCESTRAL SPECIES 1 ENSGT00940000157667 ENSGT00940000158481 ENSGT00940000159662 ENSGT00940000156620 ENSGT00940000161101 ENSGT00940000162841 ENSGT00390000016821 ENSGT00940000157226 ENSGT00940000154860 ENSGT00390000006196 ENSGT00390000010991 ENSGT00940000157405 ENSGT00390000013149 #20 ENSGT00390000012559 #21 ENSGT00390000008679 ENSGT00940000155426 #22 ENSGT00530000063981.b #23 ENSGT00390000006218 #24 ENSGT00940000160574 #25 ENSGT00440000034605 #26 ENSGT00390000016768 #28 ENSGT00940000154234.a #29 ENSGT00940000155379 #30 ENSGT00530000063822.a.a #31 ENSGT00940000156046 #32 ENSGT00390000001680 #33 ENSGT00940000159310 #34 ENSGT00940000160980 #35 ENSGT00390000018100 #36 ENSGT00940000157661 ENSGT00390000009140 Suina ANCESTRAL SPECIES 34 ENSGT00940000157667 ENSGT00940000158481 ENSGT00940000159662 ENSGT00940000156620 ENSGT00940000161101 ENSGT00940000162841 ENSGT00390000016821 ENSGT00940000157226 ENSGT00940000154860 ENSGT00390000006196 ENSGT00390000010991 ENSGT00940000157405 ENSGT00390000013149 #20 ENSGT00390000012559 #21 ENSGT00390000008679 ENSGT00940000155426 #22 ENSGT00530000063981.b #23 ENSGT00390000006218 #24 ENSGT00940000160574 #25 ENSGT00440000034605 #26 ENSGT00390000016768 #28 ENSGT00940000156866.db.b ENSGT00940000154234.a #29 ENSGT00940000155379 #30 ENSGT00530000063822.a.a #31 ENSGT00940000156046 #32 ENSGT00390000001680 #33 ENSGT00940000159310 #34 ENSGT00940000160980 #35 ENSGT00390000018100 #36 ENSGT00940000157661 Chacoan peccary MODERN SPECIES 919 TSPAN18 (ENSCWAG00000021388) CD82 (ENSCWAG00000021401) ALX4 (ENSCWAG00000021413) EXT2 (ENSCWAG00000021417) ACCS (ENSCWAG00000021431) ACCSL (ENSCWAG00000021443) C11orf96 (ENSCWAG00000021454) ALKBH3 (ENSCWAG00000021459) HSD17B12 (ENSCWAG00000021466) TTC17 (ENSCWAG00000021487) API5 (ENSCWAG00000021500) LRRC4C (ENSCWAG00000021529) IFTAP (ENSCWAG00000021537) #20 RAG2 (ENSCWAG00000021551) #21 RAG1 (ENSCWAG00000021554) TRAF6 (ENSCWAG00000021557) #22 PRR5L (ENSCWAG00000021567) #23 COMMD9 (ENSCWAG00000021577) #24 LDLRAD3 (ENSCWAG00000021589) #25 TRIM44 (ENSCWAG00000021596) #26 FJX1 (ENSCWAG00000021598) #28 ENSCWAG00000021601 PAMR1 (ENSCWAG00000021608) #29 SLC1A2 (ENSCWAG00000021640) #30 CD44 (ENSCWAG00000021745) #31 PDHX (ENSCWAG00000021806) #32 APIP (ENSCWAG00000021813) #33 EHF (ENSCWAG00000021818) #34 ELF5 (ENSCWAG00000021834) #35 CAT (ENSCWAG00000021844) #36 ABTB2 (ENSCWAG00000021850) Pig MODERN SPECIES 10 ENSSSCG00000061941 ENSSSCG00000013281 ACCS (ENSSSCG00000013282) ACCSL (ENSSSCG00000057793) ALKBH3 (ENSSSCG00000040937) HSD17B12 (ENSSSCG00000021739) TTC17 (ENSSSCG00000013284) API5 (ENSSSCG00000013285) ENSSSCG00000049087 LRRC4C (ENSSSCG00000013286) ENSSSCG00000048619 ENSSSCG00000044221 IFTAP (ENSSSCG00000035489) #20 RAG2 (ENSSSCG00000034285) #21 RAG1 (ENSSSCG00000026145) TRAF6 (ENSSSCG00000038082) #22 PRR5L (ENSSSCG00000013292) #23 ENSSSCG00000046177 COMMD9 (ENSSSCG00000013293) #24 ENSSSCG00000046114 LDLRAD3 (ENSSSCG00000013294) #25 ENSSSCG00000062228 TRIM44 (ENSSSCG00000013295) #26 FJX1 (ENSSSCG00000025588) #28 ENSSSCG00000040861 PAMR1 (ENSSSCG00000028338) #29 SLC1A2 (ENSSSCG00000013296) #30 CD44 (ENSSSCG00000013297) #31 ENSSSCG00000045027 PDHX (ENSSSCG00000013298) #32 ENSSSCG00000058879 Artiodactyla_a ANCESTRAL SPECIES 1 ENSGT00940000157667 ENSGT00940000158481 ENSGT00940000159662 ENSGT00940000156620 ENSGT00940000161101 ENSGT00940000162841 ENSGT00390000016821 ENSGT00940000157226 ENSGT00940000154860 ENSGT00390000006196 ENSGT00390000010991 ENSGT00940000157405 ENSGT00390000013149 #20 ENSGT00390000012559 #21 ENSGT00390000008679 ENSGT00940000155426 #22 ENSGT00530000063981.b #23 ENSGT00390000006218 #24 ENSGT00940000160574 #25 ENSGT00440000034605 #26 ENSGT00390000016768 #28 ENSGT00940000154234.a #29 ENSGT00940000155379 #30 ENSGT00530000063822.a.a #31 ENSGT00940000156046 #32 ENSGT00390000001680 #33 ENSGT00940000159310 #34 ENSGT00940000160980 #35 ENSGT00390000018100 #36 ENSGT00940000157661 ENSGT00390000009140 Artiodactyla_b ANCESTRAL SPECIES 1 ENSGT00940000158481 ENSGT00940000159662 ENSGT00940000156620 ENSGT00940000161101 ENSGT00940000162841 ENSGT00910000148817 ENSGT00390000016821 ENSGT00940000157226 ENSGT00940000154860 ENSGT00390000006196 ENSGT00390000010991 ENSGT00940000157405 ENSGT00390000013149 #20 ENSGT00390000012559 #21 ENSGT00390000008679 ENSGT00940000155426 #22 ENSGT00530000063981.b #23 ENSGT00390000006218 #24 ENSGT00940000160574 #25 ENSGT00440000034605 #26 ENSGT00390000016768 #28 ENSGT00940000154234.a #29 ENSGT00940000155379 #30 ENSGT00530000063822.a.a #31 ENSGT00940000156046 #32 ENSGT00390000001680 #33 ENSGT00940000159310 #34 ENSGT00940000160980 #35 ENSGT00390000018100 #36 ENSGT00940000157661 ENSGT00390000009140 Cetacea ANCESTRAL SPECIES 4 ENSGT00940000156620 ENSGT00940000161101 ENSGT00940000162841 ENSGT00390000016821 ENSGT00940000157226 ENSGT00940000154860 ENSGT00390000006196 ENSGT00390000010991 ENSGT00390000016292.i.a.b ENSGT00930000151314.e ENSGT00390000017491.s.b.g ENSGT00940000157405 ENSGT00390000013149 #20 ENSGT00390000012559 #21 ENSGT00390000008679 ENSGT00940000155426 #22 ENSGT00530000063981.b #23 ENSGT00390000006218 #24 ENSGT00940000160574 #25 ENSGT00440000034605 #26 ENSGT00390000016768 #28 ENSGT00940000154234.a #29 ENSGT00940000155379 #30 ENSGT00530000063822.a.a #31 ENSGT00940000156046 #32 ENSGT00390000001680 #33 ENSGT00940000159310 #34 ENSGT00940000160980 #35 ENSGT00390000018100 #36 ENSGT00940000157661 ENSGT00390000009140 Odontoceti ANCESTRAL SPECIES 4 ENSGT00940000156620 ENSGT00940000161101 ENSGT00940000162841 ENSGT00390000016821 ENSGT00940000157226 ENSGT00940000154860 ENSGT00390000006196 ENSGT00390000010991 ENSGT00390000016292.i.a.b ENSGT00930000151314.e ENSGT00390000017491.s.b.g ENSGT00940000157405 ENSGT00390000013149 #20 ENSGT00390000012559 #21 ENSGT00390000008679 ENSGT00940000155426 #22 ENSGT00530000063981.b #23 ENSGT00390000006218 #24 ENSGT00940000160574 #25 ENSGT00440000034605 #26 ENSGT00390000016768 #28 ENSGT00940000154234.a #29 ENSGT00940000155379 #30 ENSGT00530000063822.a.a #31 ENSGT00940000156046 #32 ENSGT00390000001680 #33 ENSGT00940000159310 #34 ENSGT00940000160980 #35 ENSGT00390000018100 #36 ENSGT00940000157661 ENSGT00390000009140 Odontoceti_a ANCESTRAL SPECIES 4 ENSGT00940000161101 ENSGT00940000162841 ENSGT00910000148817 ENSGT00390000016821 ENSGT00940000157226 ENSGT00940000154860 ENSGT00390000006196 ENSGT00390000010991 ENSGT00390000016292.i.a.b ENSGT00930000151314.e ENSGT00390000017491.s.b.g ENSGT00940000157405 ENSGT00390000013149 #20 ENSGT00390000012559 #21 ENSGT00390000008679 ENSGT00940000155426 #22 ENSGT00530000063981.b #23 ENSGT00390000006218 #24 ENSGT00940000160574 #25 ENSGT00440000034605 #26 ENSGT00390000016768 #28 ENSGT00940000154234.a #29 ENSGT00940000155379 #30 ENSGT00530000063822.a.a #31 ENSGT00940000156046 #32 ENSGT00390000001680 #33 ENSGT00940000159310 #34 ENSGT00940000160980 #35 ENSGT00390000018100 #36 ENSGT00940000157661 ENSGT00390000009140 Odontoceti_b ANCESTRAL SPECIES 4 ENSGT00940000161101 ENSGT00940000162841 ENSGT00910000148817 ENSGT00390000016821 ENSGT00940000157226 ENSGT00940000154860 ENSGT00390000006196 ENSGT00390000010991 ENSGT00390000016292.i.a.b ENSGT00930000151314.e ENSGT00390000017491.s.b.g ENSGT00940000157405 ENSGT00390000013149 #20 ENSGT00390000012559 #21 ENSGT00390000008679 ENSGT00940000155426 #22 ENSGT00530000063981.b #23 ENSGT00390000006218 #24 ENSGT00940000160574 #25 ENSGT00440000034605 #26 ENSGT00390000016768 #28 ENSGT00940000154234.a #29 ENSGT00940000155379 #30 ENSGT00530000063822.a.a #31 ENSGT00940000156046 #32 ENSGT00390000001680 #33 ENSGT00940000159310 #34 ENSGT00940000160980 #35 ENSGT00390000018100 #36 ENSGT00940000157661 ENSGT00390000009140 Monodontidae ANCESTRAL SPECIES 2 ENSGT00940000159662 ENSGT00940000156620 ENSGT00940000161101 ENSGT00940000162841 ENSGT00940000157226 ENSGT00940000154860 ENSGT00390000006196 ENSGT00390000010991 ENSGT00390000016292.i.a.b ENSGT00930000151314.e ENSGT00390000017491.s.b.g ENSGT00940000157405 ENSGT00390000013149 #20 ENSGT00390000012559 #21 ENSGT00390000008679 ENSGT00940000155426 #22 ENSGT00530000063981.b #23 ENSGT00390000006218 #24 ENSGT00940000160574 #25 ENSGT00440000034605 #26 ENSGT00390000016768 #28 ENSGT00940000154234.a #29 ENSGT00940000155379 #30 ENSGT00530000063822.a.a #31 ENSGT00940000156046 #32 ENSGT00390000001680 #33 ENSGT00940000159310 #34 ENSGT00940000160980 #35 ENSGT00390000018100 #36 ENSGT00940000157661 ENSGT00390000009140 Beluga whale MODERN SPECIES 32 ENSDLEG00000012772 ENSDLEG00000012785 ENSDLEG00000012790 LRRC4C (ENSDLEG00000012796) ENSDLEG00000012800 CUNH11orf74 (ENSDLEG00000012812) #20 RAG2 (ENSDLEG00000012831) #21 RAG1 (ENSDLEG00000012836) TRAF6 (ENSDLEG00000012843) #22 PRR5L (ENSDLEG00000012871) #23 COMMD9 (ENSDLEG00000012880) #24 LDLRAD3 (ENSDLEG00000012917) #25 TRIM44 (ENSDLEG00000012932) #26 FJX1 (ENSDLEG00000012954) #28 PAMR1 (ENSDLEG00000012961) #29 SLC1A2 (ENSDLEG00000013009) #30 CD44 (ENSDLEG00000013125) #31 PDHX (ENSDLEG00000013346) #32 APIP (ENSDLEG00000013390) #33 EHF (ENSDLEG00000013404) #34 ELF5 (ENSDLEG00000013416) #35 CAT (ENSDLEG00000013434) #36 ABTB2 (ENSDLEG00000013511) CAPRIN1 (ENSDLEG00000013754) Narwhal MODERN SPECIES 314 TSPAN18 (ENSMMNG00015017592) CD82 (ENSMMNG00015017522) ALX4 (ENSMMNG00015017478) EXT2 (ENSMMNG00015017366) ACCS (ENSMMNG00015016880) ACCSL (ENSMMNG00015016665) HSD17B12 (ENSMMNG00015016514) TTC17 (ENSMMNG00015016233) API5 (ENSMMNG00015015999) ENSMMNG00015015919 ENSMMNG00015015888 LRRC4C (ENSMMNG00015020998) IFTAP (ENSMMNG00015020977) #20 RAG2 (ENSMMNG00015020969) #21 RAG1 (ENSMMNG00015020958) TRAF6 (ENSMMNG00015020943) #22 PRR5L (ENSMMNG00015020929) #23 COMMD9 (ENSMMNG00015020902) #24 LDLRAD3 (ENSMMNG00015020881) #25 TRIM44 (ENSMMNG00015020855) #26 FJX1 (ENSMMNG00015020839) #28 PAMR1 (ENSMMNG00015020804) #29 SLC1A2 (ENSMMNG00015020614) #30 CD44 (ENSMMNG00015020401) #31 PDHX (ENSMMNG00015020321) #32 APIP (ENSMMNG00015020302) #33 EHF (ENSMMNG00015020278) #34 ELF5 (ENSMMNG00015020227) #35 CAT (ENSMMNG00015020166) #36 ABTB2 (ENSMMNG00015020118) NAT10 (ENSMMNG00015020058) Vaquita MODERN SPECIES 19 ENSPSNG00000021026 C11orf96 (ENSPSNG00000021018) ALKBH3 (ENSPSNG00000020981) HSD17B12 (ENSPSNG00000020946) TTC17 (ENSPSNG00000020829) API5 (ENSPSNG00000020459) ENSPSNG00000020378 ENSPSNG00000020355 ENSPSNG00000020331 LRRC4C (ENSPSNG00000020317) ENSPSNG00000020308 ENSPSNG00000020284 IFTAP (ENSPSNG00000020245) #20 RAG2 (ENSPSNG00000020227) #21 RAG1 (ENSPSNG00000020212) TRAF6 (ENSPSNG00000020184) #22 PRR5L (ENSPSNG00000020077) #23 COMMD9 (ENSPSNG00000020006) #24 LDLRAD3 (ENSPSNG00000019913) #25 TRIM44 (ENSPSNG00000019844) #26 FJX1 (ENSPSNG00000019820) #28 PAMR1 (ENSPSNG00000019762) #29 SLC1A2 (ENSPSNG00000019163) #30 CD44 (ENSPSNG00000018554) #31 PDHX (ENSPSNG00000018369) #32 APIP (ENSPSNG00000018319) #33 EHF (ENSPSNG00000018151) #34 ELF5 (ENSPSNG00000017789) #35 CAT (ENSPSNG00000017719) #36 ENSPSNG00000017692 ENSPSNG00000017670 Dolphin MODERN SPECIES 435 TRAF6 (ENSTTRG00000008727) #22 PRR5L (ENSTTRG00000008723) #23 Sperm whale MODERN SPECIES 7 ALX4 (ENSPCTG00005015649) EXT2 (ENSPCTG00005015291) ACCSL (ENSPCTG00005015019) C16H11orf96 (ENSPCTG00005015005) ALKBH3 (ENSPCTG00005014964) HSD17B12 (ENSPCTG00005014877) TTC17 (ENSPCTG00005014617) API5 (ENSPCTG00005014154) ENSPCTG00005013951 ENSPCTG00005013926 ENSPCTG00005013896 LRRC4C (ENSPCTG00005013853) C16H11orf74 (ENSPCTG00005013719) #20 RAG2 (ENSPCTG00005013695) #21 RAG1 (ENSPCTG00005013675) TRAF6 (ENSPCTG00005013602) #22 PRR5L (ENSPCTG00005013353) #23 COMMD9 (ENSPCTG00005013198) #24 LDLRAD3 (ENSPCTG00005013075) #25 TRIM44 (ENSPCTG00005012988) #26 FJX1 (ENSPCTG00005012957) #28 ENSPCTG00005012912 PAMR1 (ENSPCTG00005012627) #29 SLC1A2 (ENSPCTG00005011641) #30 CD44 (ENSPCTG00005011079) #31 PDHX (ENSPCTG00005010927) #32 APIP (ENSPCTG00005010863) #33 EHF (ENSPCTG00005010749) #34 ELF5 (ENSPCTG00005010589) #35 ENSPCTG00005010549 CAT (ENSPCTG00005010499) #36 Blue whale MODERN SPECIES 19 ACCS (ENSBMSG00010013522) ENSBMSG00010013443 C11orf96 (ENSBMSG00010013431) ALKBH3 (ENSBMSG00010013420) HSD17B12 (ENSBMSG00010013402) TTC17 (ENSBMSG00010013363) API5 (ENSBMSG00010013262) ENSBMSG00010013220 ENSBMSG00010013215 ENSBMSG00010013207 LRRC4C (ENSBMSG00010013196) ENSBMSG00010013188 ENSBMSG00010013173 #20 RAG2 (ENSBMSG00010013164) #21 RAG1 (ENSBMSG00010013155) TRAF6 (ENSBMSG00010013148) #22 PRR5L (ENSBMSG00010013135) #23 COMMD9 (ENSBMSG00010013117) #24 ENSBMSG00010013107 LDLRAD3 (ENSBMSG00010013096) #25 ENSBMSG00010013080 #26 FJX1 (ENSBMSG00010013062) #28 PAMR1 (ENSBMSG00010013047) #29 SLC1A2 (ENSBMSG00010012885) #30 CD44 (ENSBMSG00010012733) #31 ENSBMSG00010012689 PDHX (ENSBMSG00010013305) #32 APIP (ENSBMSG00010013281) #33 EHF (ENSBMSG00010013242) #34 ELF5 (ENSBMSG00010013193) #35 CAT (ENSBMSG00010013166) #36 Pecora ANCESTRAL SPECIES 7 ENSGT00940000158481 ENSGT00940000159662 ENSGT00940000156620 ENSGT00940000161101 ENSGT00940000162841 ENSGT00910000148817 ENSGT00390000016821 ENSGT00940000157226 ENSGT00940000154860 ENSGT00390000006196 ENSGT00390000010991 ENSGT00940000157405 ENSGT00390000013149 #20 ENSGT00390000012559 #21 ENSGT00390000008679 ENSGT00940000155426 #22 ENSGT00530000063981.b #23 ENSGT00390000006218 #24 ENSGT00940000160574 #25 ENSGT00440000034605 #26 ENSGT00390000016768 #28 ENSGT00940000154234.a #29 ENSGT00940000155379 #30 ENSGT00530000063822.a.a #31 ENSGT00940000156046 #32 ENSGT00390000001680 #33 ENSGT00940000159310 #34 ENSGT00940000160980 #35 ENSGT00390000018100 #36 ENSGT00940000157661 ENSGT00390000009140 Yarkand deer MODERN SPECIES CD82 (ENSCHYG00000000545) ALX4 (ENSCHYG00000000519) EXT2 (ENSCHYG00000000443) ACCS (ENSCHYG00000000358) ACCSL (ENSCHYG00000000316) C11orf96 (ENSCHYG00000000279) ALKBH3 (ENSCHYG00000000269) HSD17B12 (ENSCHYG00000000235) ENSCHYG00000000150 API5 (ENSCHYG00000000112) ENSCHYG00000000090 LRRC4C (ENSCHYG00000000081) IFTAP (ENSCHYG00000000051) #20 RAG2 (ENSCHYG00000017191) #21 RAG1 (ENSCHYG00000017160) TRAF6 (ENSCHYG00000017116) #22 PRR5L (ENSCHYG00000017023) #23 COMMD9 (ENSCHYG00000016864) #24 LDLRAD3 (ENSCHYG00000016638) #25 ENSCHYG00000016596 TRIM44 (ENSCHYG00000016460) #26 ENSCHYG00000016423 FJX1 (ENSCHYG00000016393) #28 PAMR1 (ENSCHYG00000016185) #29 SLC1A2 (ENSCHYG00000013221) #30 CD44 (ENSCHYG00000012096) #31 PDHX (ENSCHYG00000011875) #32 APIP (ENSCHYG00000011773) #33 EHF (ENSCHYG00000011655) #34 ELF5 (ENSCHYG00000011420) #35 ENSCHYG00000011376 Percora_a ANCESTRAL SPECIES 6 ENSGT00940000158481 ENSGT00940000159662 ENSGT00940000156620 ENSGT00940000161101 ENSGT00940000162841 ENSGT00910000148817 ENSGT00390000016821 ENSGT00940000157226 ENSGT00940000154860 ENSGT00390000006196 ENSGT00390000010991 ENSGT00940000157405 ENSGT00390000013149 #20 ENSGT00390000012559 #21 ENSGT00390000008679 ENSGT00940000155426 #22 ENSGT00530000063981.b #23 ENSGT00390000006218 #24 ENSGT00940000160574 #25 ENSGT00440000034605 #26 ENSGT00390000016768 #28 ENSGT00940000154234.a #29 ENSGT00940000155379 #30 ENSGT00530000063822.a.a #31 ENSGT00940000156046 #32 ENSGT00390000001680 #33 ENSGT00940000159310 #34 ENSGT00940000160980 #35 ENSGT00390000018100 #36 ENSGT00940000157661 ENSGT00390000009140 Bovidae ANCESTRAL SPECIES 6 ENSGT00940000158481 ENSGT00940000159662 ENSGT00940000156620 ENSGT00940000161101 ENSGT00940000162841 ENSGT00910000148817 ENSGT00390000016821 ENSGT00940000157226 ENSGT00940000154860 ENSGT00390000006196 ENSGT00390000010991 ENSGT00940000157405 ENSGT00390000013149 #20 ENSGT00390000012559 #21 ENSGT00390000008679 ENSGT00940000155426 #22 ENSGT00530000063981.b #23 ENSGT00390000006218 #24 ENSGT00940000160574 #25 ENSGT00440000034605 #26 ENSGT00390000016768 #28 ENSGT00940000154234.a #29 ENSGT00940000155379 #30 ENSGT00530000063822.a.a #31 ENSGT00940000156046 #32 ENSGT00390000001680 #33 ENSGT00940000159310 #34 ENSGT00940000160980 #35 ENSGT00390000018100 #36 ENSGT00940000157661 ENSGT00390000009140 Caprinae ANCESTRAL SPECIES 6 ENSGT00940000159662 ENSGT00940000156620 ENSGT00940000161101 ENSGT00940000162841 ENSGT00910000148817 ENSGT00390000016821 ENSGT00940000157226 ENSGT00940000154860 ENSGT00390000006196 ENSGT00390000010991 ENSGT01090000260040.b.b.b.b.b.a ENSGT00940000157405 ENSGT00390000013149 #20 ENSGT00390000012559 #21 ENSGT00390000008679 ENSGT00940000155426 #22 ENSGT00530000063981.b #23 ENSGT00390000006218 #24 ENSGT00940000160574 #25 ENSGT00440000034605 #26 ENSGT00390000016768 #28 ENSGT00940000154234.a #29 ENSGT00940000155379 #30 ENSGT00530000063822.a.a #31 ENSGT00940000156046 #32 ENSGT00390000001680 #33 ENSGT00940000159310 #34 ENSGT00940000160980 #35 ENSGT00390000018100 #36 ENSGT00940000157661 ENSGT00390000009140 Goat MODERN SPECIES 6 CD82 (ENSCHIG00000015537) ALX4 (ENSCHIG00000010305) EXT2 (ENSCHIG00000026007) ACCS (ENSCHIG00000026253) ACCSL (ENSCHIG00000010057) ENSCHIG00000016194 ALKBH3 (ENSCHIG00000017579) HSD17B12 (ENSCHIG00000011795) TTC17 (ENSCHIG00000011579) API5 (ENSCHIG00000015343) ENSCHIG00000008612 LRRC4C (ENSCHIG00000005885) ENSCHIG00000010847 #20 RAG2 (ENSCHIG00000009200) #21 RAG1 (ENSCHIG00000013265) TRAF6 (ENSCHIG00000015888) #22 PRR5L (ENSCHIG00000001684) #23 COMMD9 (ENSCHIG00000020550) #24 LDLRAD3 (ENSCHIG00000023229) #25 TRIM44 (ENSCHIG00000013533) #26 FJX1 (ENSCHIG00000001972) #28 PAMR1 (ENSCHIG00000018319) #29 SLC1A2 (ENSCHIG00000026938) #30 CD44 (ENSCHIG00000021491) #31 PDHX (ENSCHIG00000013247) #32 APIP (ENSCHIG00000025799) #33 EHF (ENSCHIG00000010459) #34 ELF5 (ENSCHIG00000014082) #35 CAT (ENSCHIG00000021227) #36 ABTB2 (ENSCHIG00000009432) NAT10 (ENSCHIG00000026081) Rambouillet Sheep MODERN SPECIES 6 EXT2 (ENSOARG00020019927) ACCS (ENSOARG00020019774) ENSOARG00020019654 ENSOARG00020019621 C11orf96 (ENSOARG00020019596) ALKBH3 (ENSOARG00020019554) ENSOARG00020019476 TTC17 (ENSOARG00020017912) ENSOARG00020017753 LRRC4C (ENSOARG00020017737) ENSOARG00020017700 ENSOARG00020017646 ENSOARG00020017606 #20 RAG2 (ENSOARG00020017591) #21 RAG1 (ENSOARG00020017552) TRAF6 (ENSOARG00020017492) #22 PRR5L (ENSOARG00020017314) #23 ENSOARG00020017291 COMMD9 (ENSOARG00020017119) #24 LDLRAD3 (ENSOARG00020016954) #25 TRIM44 (ENSOARG00020016896) #26 FJX1 (ENSOARG00020016861) #28 PAMR1 (ENSOARG00020016385) #29 SLC1A2 (ENSOARG00020014083) #30 PDHX (ENSOARG00020013235) #32 APIP (ENSOARG00020013162) #33 EHF (ENSOARG00020012876) #34 ELF5 (ENSOARG00020012261) #35 CAT (ENSOARG00020012114) #36 ABTB2 (ENSOARG00020011977) NAT10 (ENSOARG00020011594) Bovinae ANCESTRAL SPECIES 26 ENSGT00940000157667 ENSGT00940000158481 ENSGT00940000159662 ENSGT00940000156620 ENSGT00940000161101 ENSGT00940000162841 ENSGT00390000016821 ENSGT00940000157226 ENSGT00940000154860 ENSGT00390000006196 ENSGT00390000010991 ENSGT00940000157405 ENSGT00390000013149 #20 ENSGT00390000012559 #21 ENSGT00390000008679 ENSGT00940000155426 #22 ENSGT00530000063981.b #23 ENSGT00390000006218 #24 ENSGT00940000160574 #25 ENSGT00440000034605 #26 ENSGT00390000016768 #28 ENSGT00940000154234.a #29 ENSGT00940000155379 #30 ENSGT00530000063822.a.a #31 ENSGT00940000156046 #32 ENSGT00390000001680 #33 ENSGT00940000159310 #34 ENSGT00940000160980 #35 ENSGT00390000018100 #36 ENSGT00940000157661 ENSGT00390000009140 Bos ANCESTRAL SPECIES 25 ENSGT00940000158481 ENSGT00940000159662 ENSGT00940000156620 ENSGT00940000161101 ENSGT00940000162841 ENSGT00390000016821 ENSGT00940000157226 ENSGT00940000154860 ENSGT00390000006196 ENSGT00390000010991 ENSGT00950000185588 ENSGT00940000157405 ENSGT00390000013149 #20 ENSGT00390000012559 #21 ENSGT00390000008679 ENSGT00940000155426 #22 ENSGT00530000063981.b #23 ENSGT00390000006218 #24 ENSGT00940000160574 #25 ENSGT01100000263481.n.a.b.b.a.b.a.a.a.a.a ENSGT00440000034605 #26 ENSGT00390000016768 #28 ENSGT00940000154234.a #29 ENSGT00940000155379 #30 ENSGT00530000063822.a.a #31 ENSGT00940000156046 #32 ENSGT00390000001680 #33 ENSGT00940000159310 #34 ENSGT00940000160980 #35 ENSGT00390000018100 #36 ENSGT00940000157661 Bos_a DUPLICATION Bos_a DUPLICATION Bos_a ANCESTRAL SPECIES ENSGT00940000155426.q.a #22 Wild yak MODERN SPECIES 238 ENSBMUG00000015850 #22 ENSBMUG00000015844 Domestic yak MODERN SPECIES 28 MEMO1 (ENSBGRG00000006376) ENSBGRG00000006453 DPY30 (ENSBGRG00000006469) SPAST (ENSBGRG00000006533) SLC30A6 (ENSBGRG00000006930) NLRC4 (ENSBGRG00000007270) ENSBGRG00000007439 YIPF4 (ENSBGRG00000007460) ENSBGRG00000007493 BIRC6 (ENSBGRG00000007523) TTC27 (ENSBGRG00000008248) LTBP1 (ENSBGRG00000008349) RASGRP3 (ENSBGRG00000009656) FAM98A (ENSBGRG00000009878) ENSBGRG00000010017 ENSBGRG00000010037 #22 CRIM1 (ENSBGRG00000010106) FEZ2 (ENSBGRG00000010380) VIT (ENSBGRG00000010677) ENSBGRG00000011169 STRN (ENSBGRG00000011227) HEATR5B (ENSBGRG00000011970) GPATCH11 (ENSBGRG00000012327) EIF2AK2 (ENSBGRG00000012523) SULT6B1 (ENSBGRG00000012966) ENSBGRG00000013124 CEBPZ (ENSBGRG00000013169) NDUFAF7 (ENSBGRG00000013431) PRKD3 (ENSBGRG00000013689) QPCT (ENSBGRG00000013862) CDC42EP3 (ENSBGRG00000013923) Bos_a ANCESTRAL SPECIES ENSGT00940000155426.q.b #22 Wild yak MODERN SPECIES 353 IFTAP (ENSBMUG00000009417) #20 RAG2 (ENSBMUG00000009389) #21 RAG1 (ENSBMUG00000009374) ENSBMUG00000009367 #22 PRR5L (ENSBMUG00000009349) #23 COMMD9 (ENSBMUG00000009313) #24 LDLRAD3 (ENSBMUG00000009294) #25 TRIM44 (ENSBMUG00000009270) #26 PAMR1 (ENSBMUG00000009249) #29 SLC1A2 (ENSBMUG00000009209) #30 CD44 (ENSBMUG00000008990) #31 PDHX (ENSBMUG00000008856) #32 APIP (ENSBMUG00000008830) #33 EHF (ENSBMUG00000008785) #34 ELF5 (ENSBMUG00000008695) #35 CAT (ENSBMUG00000008657) #36 ABTB2 (ENSBMUG00000008640) NAT10 (ENSBMUG00000008507) CAPRIN1 (ENSBMUG00000008415) Bos_a ANCESTRAL SPECIES 36 ENSGT00940000158481 ENSGT00940000159662 ENSGT00940000156620 ENSGT00940000161101 ENSGT00940000162841 ENSGT00390000016821 ENSGT00940000157226 ENSGT00940000154860 ENSGT00390000006196 ENSGT00390000010991 ENSGT00950000185588 ENSGT00940000157405 ENSGT00390000013149 #20 ENSGT00390000012559 #21 ENSGT00390000008679 ENSGT00940000155426.r #22 ENSGT00530000063981.b #23 ENSGT00390000006218 #24 ENSGT00940000160574 #25 ENSGT01100000263481.n.a.b.b.a.b.a.a.a.a.a ENSGT00440000034605 #26 ENSGT00390000016768 #28 ENSGT00940000154234.a #29 ENSGT00940000155379 #30 ENSGT00530000063822.a.a #31 ENSGT00940000156046 #32 ENSGT00390000001680 #33 ENSGT00940000159310 #34 ENSGT00940000160980 #35 ENSGT00390000018100 #36 ENSGT00940000157661 Domestic yak MODERN SPECIES 4 ALX4 (ENSBGRG00000024852) EXT2 (ENSBGRG00000024837) ACCS (ENSBGRG00000024813) ENSBGRG00000024769 ENSBGRG00000024758 ALKBH3 (ENSBGRG00000024727) HSD17B12 (ENSBGRG00000024610) ENSBGRG00000024524 TTC17 (ENSBGRG00000024330) API5 (ENSBGRG00000023877) ENSBGRG00000023797 LRRC4C (ENSBGRG00000023742) IFTAP (ENSBGRG00000023557) #20 RAG2 (ENSBGRG00000023532) #21 RAG1 (ENSBGRG00000023505) ENSBGRG00000023402 #22 PRR5L (ENSBGRG00000023331) #23 COMMD9 (ENSBGRG00000023221) #24 ENSBGRG00000023199 LDLRAD3 (ENSBGRG00000023131) #25 TRIM44 (ENSBGRG00000023024) #26 FJX1 (ENSBGRG00000022999) #28 PAMR1 (ENSBGRG00000022671) #29 ENSBGRG00000022651 SLC1A2 (ENSBGRG00000021839) #30 CD44 (ENSBGRG00000020517) #31 PDHX (ENSBGRG00000020368) #32 APIP (ENSBGRG00000020331) #33 ENSBGRG00000020318 EHF (ENSBGRG00000020179) #34 ENSBGRG00000020151 Bos_b ANCESTRAL SPECIES 12 ENSGT00940000158481 ENSGT00940000159662 ENSGT00940000156620 ENSGT00940000161101 ENSGT00940000162841 ENSGT00390000016821 ENSGT00940000157226 ENSGT00940000154860 ENSGT00390000006196 ENSGT00390000010991 ENSGT00950000185588 ENSGT00940000157405 ENSGT00390000013149 #20 ENSGT00390000012559 #21 ENSGT00390000008679 ENSGT00940000155426 #22 ENSGT00530000063981.b #23 ENSGT00390000006218 #24 ENSGT00940000160574 #25 ENSGT01100000263481.n.a.b.b.a.b.a.a.a.a.a ENSGT00440000034605 #26 ENSGT00390000016768 #28 ENSGT00940000154234.a #29 ENSGT00940000155379 #30 ENSGT00530000063822.a.a #31 ENSGT00940000156046 #32 ENSGT00390000001680 #33 ENSGT00940000159310 #34 ENSGT00940000160980 #35 ENSGT00390000018100 #36 ENSGT00940000157661 Cow MODERN SPECIES 6 CD82 (ENSBTAG00000031252) ALX4 (ENSBTAG00000027563) EXT2 (ENSBTAG00000019644) ACCS (ENSBTAG00000008465) ACCSL (ENSBTAG00000012053) C15H11orf96 (ENSBTAG00000045822) ALKBH3 (ENSBTAG00000009518) HSD17B12 (ENSBTAG00000000087) TTC17 (ENSBTAG00000031299) API5 (ENSBTAG00000014474) ENSBTAG00000051591 LRRC4C (ENSBTAG00000007324) IFTAP (ENSBTAG00000021611) #20 RAG2 (ENSBTAG00000031309) #21 RAG1 (ENSBTAG00000040293) TRAF6 (ENSBTAG00000036009) #22 PRR5L (ENSBTAG00000021029) #23 COMMD9 (ENSBTAG00000019045) #24 LDLRAD3 (ENSBTAG00000044158) #25 TRIM44 (ENSBTAG00000037389) #26 FJX1 (ENSBTAG00000047083) #28 PAMR1 (ENSBTAG00000012630) #29 SLC1A2 (ENSBTAG00000012628) #30 CD44 (ENSBTAG00000011578) #31 PDHX (ENSBTAG00000018261) #32 APIP (ENSBTAG00000018257) #33 EHF (ENSBTAG00000017150) #34 ELF5 (ENSBTAG00000012460) #35 CAT (ENSBTAG00000020980) #36 ABTB2 (ENSBTAG00000005923) NAT10 (ENSBTAG00000016747) Hybrid Bos Indicus MODERN SPECIES 6 ACCS (ENSBIXG00005002769) ACCSL (ENSBIXG00005016927) C11orf96 (ENSBIXG00005002746) ENSBIXG00005016904 ALKBH3 (ENSBIXG00005016885) HSD17B12 (ENSBIXG00005007044) ENSBIXG00005016812 ENSBIXG00005016808 TTC17 (ENSBIXG00005006754) ENSBIXG00005002693 API5 (ENSBIXG00005016658) LRRC4C (ENSBIXG00005016515) IFTAP (ENSBIXG00005016428) #20 RAG2 (ENSBIXG00005006240) #21 RAG1 (ENSBIXG00005016289) TRAF6 (ENSBIXG00005016273) #22 PRR5L (ENSBIXG00005002585) #23 ENSBIXG00005016155 #24 LDLRAD3 (ENSBIXG00005007025) #25 ENSBIXG00005016028 TRIM44 (ENSBIXG00005016001) #26 FJX1 (ENSBIXG00005015936) #28 PAMR1 (ENSBIXG00005002511) #29 SLC1A2 (ENSBIXG00005015820) #30 CD44 (ENSBIXG00005015299) #31 PDHX (ENSBIXG00005002203) #32 APIP (ENSBIXG00005014975) #33 EHF (ENSBIXG00005002187) #34 ELF5 (ENSBIXG00005007013) #35 CAT (ENSBIXG00005005408) #36 ABTB2 (ENSBIXG00005014726) American bison MODERN SPECIES 3375 IFTAP (ENSBBBG00000011500) #20 RAG2 (ENSBBBG00000011509) #21 RAG1 (ENSBBBG00000011514) TRAF6 (ENSBBBG00000011532) #22 PRR5L (ENSBBBG00000011560) #23 COMMD9 (ENSBBBG00000002127) #24 LDLRAD3 (ENSBBBG00000011618) #25 TRIM44 (ENSBBBG00000011629) #26 PAMR1 (ENSBBBG00000011674) #29 SLC1A2 (ENSBBBG00000011827) #30 CD44 (ENSBBBG00000011908) #31 PDHX (ENSBBBG00000008496) #32 APIP (ENSBBBG00000011938) #33 EHF (ENSBBBG00000011971) #34 ELF5 (ENSBBBG00000011994) #35 CAT (ENSBBBG00000002255) #36 ABTB2 (ENSBBBG00000012027) NAT10 (ENSBBBG00000012102) CAPRIN1 (ENSBBBG00000012178) Siberian musk deer MODERN SPECIES 119 IFTAP (ENSMMSG00000011844) #20 RAG2 (ENSMMSG00000011907) #21 RAG1 (ENSMMSG00000011916) TRAF6 (ENSMMSG00000011934) #22 PRR5L (ENSMMSG00000011967) #23 COMMD9 (ENSMMSG00000011997) #24 LDLRAD3 (ENSMMSG00000012049) #25 Camelidae ANCESTRAL SPECIES 25 ENSGT00940000157667 ENSGT00940000158481 ENSGT00940000159662 ENSGT00940000156620 ENSGT00940000161101 ENSGT00940000162841 ENSGT00390000016821 ENSGT00940000157226 ENSGT00940000154860 ENSGT00390000006196 ENSGT00390000010991 ENSGT00940000157405 ENSGT00390000013149 #20 ENSGT00390000012559 #21 ENSGT00390000008679 ENSGT00940000155426 #22 ENSGT00530000063981.b #23 ENSGT00390000004029.m ENSGT00390000006218 #24 ENSGT00940000160574 #25 ENSGT00440000034605 #26 ENSGT00940000154234.a #29 ENSGT00940000155379 #30 ENSGT00530000063822.a.a #31 ENSGT00940000156046 #32 ENSGT00390000001680 #33 ENSGT00940000159310 #34 ENSGT00940000160980 #35 ENSGT00390000018100 #36 ENSGT00940000157661 ENSGT00390000009140 Arabian camel MODERN SPECIES 1 ALX4 (ENSCDRG00005012645) EXT2 (ENSCDRG00005012724) ACCS (ENSCDRG00005012856) ACCSL (ENSCDRG00005013037) C11orf96 (ENSCDRG00005013211) ALKBH3 (ENSCDRG00005013227) HSD17B12 (ENSCDRG00005013288) ENSCDRG00005013476 TTC17 (ENSCDRG00005013500) API5 (ENSCDRG00005013676) LRRC4C (ENSCDRG00005014168) ENSCDRG00005014183 IFTAP (ENSCDRG00005014214) #20 RAG2 (ENSCDRG00005014248) #21 RAG1 (ENSCDRG00005014267) TRAF6 (ENSCDRG00005014279) #22 PRR5L (ENSCDRG00005014325) #23 ENSCDRG00005014439 COMMD9 (ENSCDRG00005014454) #24 LDLRAD3 (ENSCDRG00005014562) #25 TRIM44 (ENSCDRG00005014729) #26 PAMR1 (ENSCDRG00005014873) #29 SLC1A2 (ENSCDRG00005015138) #30 CD44 (ENSCDRG00005016811) #31 PDHX (ENSCDRG00005017404) #32 APIP (ENSCDRG00005017467) #33 EHF (ENSCDRG00005017510) #34 ELF5 (ENSCDRG00005017592) #35 CAT (ENSCDRG00005017656) #36 ABTB2 (ENSCDRG00005017710) NAT10 (ENSCDRG00005017893) Alpaca MODERN SPECIES 1589 RAG1 (ENSVPAG00000008826) TRAF6 (ENSVPAG00000008825) #22 ENSVPAG00000008824 #23 UQCRQ (ENSVPAG00000008823) Laurasiatheria_b ANCESTRAL SPECIES 1 ENSGT00940000158481 ENSGT00940000159662 ENSGT00940000156620 ENSGT00940000161101 ENSGT00940000162841 ENSGT00390000016821 ENSGT00940000157226 ENSGT00940000154860 ENSGT00520000059086 ENSGT00390000006196 ENSGT00390000010991 ENSGT00940000157405 ENSGT00390000013149 #20 ENSGT00390000012559 #21 ENSGT00390000008679 ENSGT00940000155426 #22 ENSGT00530000063981.b #23 ENSGT00390000006218 #24 ENSGT00940000160574 #25 ENSGT00440000034605 #26 ENSGT00390000016768 #28 ENSGT00940000154234.a #29 ENSGT00940000155379 #30 ENSGT00530000063822.a.a #31 ENSGT00940000156046 #32 ENSGT00390000001680 #33 ENSGT00940000159310 #34 ENSGT00940000160980 #35 ENSGT00390000018100 #36 ENSGT00940000157661 ENSGT00390000009140 Carnivora ANCESTRAL SPECIES 7 ENSGT00940000157667 ENSGT00940000158481 ENSGT00940000159662 ENSGT00940000156620 ENSGT00940000161101 ENSGT00940000162841 ENSGT00390000016821 ENSGT00940000157226 ENSGT00940000154860 ENSGT00390000006196 ENSGT00390000010991 ENSGT00940000157405 ENSGT00390000013149 #20 ENSGT00390000012559 #21 ENSGT00390000008679 ENSGT00940000155426 #22 ENSGT00530000063981.b #23 ENSGT00390000006218 #24 ENSGT00940000160574 #25 ENSGT00440000034605 #26 ENSGT00390000016768 #28 ENSGT00940000154234.a #29 ENSGT00940000155379 #30 ENSGT00530000063822.a.a #31 ENSGT00940000156046 #32 ENSGT00390000001680 #33 ENSGT00940000159310 #34 ENSGT00940000160980 #35 ENSGT00390000018100 #36 ENSGT00940000157661 ENSGT00390000009140 Caniformia ANCESTRAL SPECIES 25 ENSGT00940000157667 ENSGT00940000158481 ENSGT00940000159662 ENSGT00940000156620 ENSGT00940000161101 ENSGT00940000162841 ENSGT00390000016821 ENSGT00940000157226 ENSGT00940000154860 ENSGT00390000006196 ENSGT00390000010991 ENSGT00940000157405 ENSGT00390000013149 #20 ENSGT00390000012559 #21 ENSGT00390000008679 ENSGT00940000155426 #22 ENSGT00530000063981.b #23 ENSGT00390000006218 #24 ENSGT00940000160574 #25 ENSGT00440000034605 #26 ENSGT00390000016768 #28 ENSGT00940000154234.a #29 ENSGT00940000155379 #30 ENSGT00530000063822.a.a #31 ENSGT00940000156046 #32 ENSGT00390000001680 #33 ENSGT00940000159310 #34 ENSGT00940000160980 #35 ENSGT00390000018100 #36 ENSGT00940000157661 ENSGT00390000009140 Caniformia_b ANCESTRAL SPECIES 3 ENSGT00940000157667 ENSGT00940000158481 ENSGT00940000159662 ENSGT00940000156620 ENSGT00940000161101 ENSGT00940000162841 ENSGT00390000016821 ENSGT00940000157226 ENSGT00940000154860 ENSGT00390000006196 ENSGT00390000010991 ENSGT00940000157405 ENSGT00390000013149 #20 ENSGT00390000012559 #21 ENSGT00390000008679 ENSGT00940000155426 #22 ENSGT00530000063981.b #23 ENSGT00390000006218 #24 ENSGT00940000160574 #25 ENSGT00440000034605 #26 ENSGT00390000016768 #28 ENSGT00940000154234.a #29 ENSGT00940000155379 #30 ENSGT00530000063822.a.a #31 ENSGT00940000156046 #32 ENSGT00390000001680 #33 ENSGT00940000159310 #34 ENSGT00940000160980 #35 ENSGT00390000018100 #36 ENSGT00940000157661 ENSGT00390000009140 Ursidae ANCESTRAL SPECIES 2 ENSGT00940000158481 ENSGT00940000159662 ENSGT00940000156620 ENSGT00940000161101 ENSGT00940000162841 ENSGT00910000148817 ENSGT00390000016821 ENSGT00940000157226 ENSGT00940000154860 ENSGT00390000006196 ENSGT00390000010991 ENSGT00940000157405 ENSGT00390000013149 #20 ENSGT00390000012559 #21 ENSGT00390000008679 ENSGT00940000155426 #22 ENSGT00530000063981.b #23 ENSGT00390000006218 #24 ENSGT00940000160574 #25 ENSGT00440000034605 #26 ENSGT00940000154234.a #29 ENSGT00940000155379 #30 ENSGT00530000063822.a.a #31 ENSGT00940000156046 #32 ENSGT00390000001680 #33 ENSGT00940000159310.f #34 ENSGT00940000160980 #35 ENSGT00390000018100 #36 ENSGT00940000157661 ENSGT00390000009140 ENSGT00940000153438.a Ursus ANCESTRAL SPECIES 69 ENSGT00390000013149 #20 ENSGT00390000012559 #21 ENSGT00390000008679 ENSGT00940000155426 #22 ENSGT00530000063981.b #23 ENSGT00390000006218 #24 ENSGT00940000160574 #25 ENSGT00440000034605 #26 ENSGT00940000154234.a #29 ENSGT00940000155379 #30 ENSGT00530000063822.a.a #31 ENSGT00940000156046 #32 ENSGT00390000001680 #33 ENSGT00940000159310.f #34 ENSGT00940000160980 #35 ENSGT00390000018100 #36 ENSGT00940000157661 ENSGT00390000009140 ENSGT00940000153438.a Polar bear MODERN SPECIES 141 ENSUMAG00000017431 IFTAP (ENSUMAG00000017436) #20 RAG2 (ENSUMAG00000017443) #21 RAG1 (ENSUMAG00000017447) TRAF6 (ENSUMAG00000017451) #22 PRR5L (ENSUMAG00000017453) #23 COMMD9 (ENSUMAG00000017457) #24 LDLRAD3 (ENSUMAG00000017460) #25 TRIM44 (ENSUMAG00000017467) #26 PAMR1 (ENSUMAG00000017480) #29 SLC1A2 (ENSUMAG00000017517) #30 CD44 (ENSUMAG00000017982) #31 PDHX (ENSUMAG00000018023) #32 APIP (ENSUMAG00000018044) #33 EHF (ENSUMAG00000018075) #34 ELF5 (ENSUMAG00000018100) #35 CAT (ENSUMAG00000018116) #36 ENSUMAG00000018139 NAT10 (ENSUMAG00000018144) CAPRIN1 (ENSUMAG00000018261) American black bear MODERN SPECIES 3002 TRAF6 (ENSUAMG00000023265) #22 PRR5L (ENSUAMG00000023264) #23 COMMD9 (ENSUAMG00000023263) #24 Giant Panda MODERN SPECIES 7 TP53I11 (ENSAMEG00000000751) TSPAN18 (ENSAMEG00000000765) CD82 (ENSAMEG00000009274) ALX4 (ENSAMEG00000027276) EXT2 (ENSAMEG00000004795) ACCSL (ENSAMEG00000004827) ALKBH3 (ENSAMEG00000004842) HSD17B12 (ENSAMEG00000004853) TTC17 (ENSAMEG00000011414) API5 (ENSAMEG00000011377) LRRC4C (ENSAMEG00000018951) ENSAMEG00000029325 IFTAP (ENSAMEG00000013857) #20 RAG2 (ENSAMEG00000019398) #21 RAG1 (ENSAMEG00000019378) TRAF6 (ENSAMEG00000013844) #22 PRR5L (ENSAMEG00000013834) #23 COMMD9 (ENSAMEG00000013820) #24 LDLRAD3 (ENSAMEG00000013817) #25 TRIM44 (ENSAMEG00000030107) #26 PAMR1 (ENSAMEG00000007801) #29 SLC1A2 (ENSAMEG00000007834) #30 CD44 (ENSAMEG00000007891) #31 PDHX (ENSAMEG00000007973) #32 APIP (ENSAMEG00000008004) #33 EHF (ENSAMEG00000008016) #34 ELF5 (ENSAMEG00000008027) #35 CAT (ENSAMEG00000008040) #36 ABTB2 (ENSAMEG00000008073) NAT10 (ENSAMEG00000008124) CAPRIN1 (ENSAMEG00000008137) Mustelinae ANCESTRAL SPECIES 30 ENSGT00390000013149 #20 ENSGT00390000012559 #21 ENSGT00390000008679 ENSGT00940000155426 #22 ENSGT00530000063981.b #23 ENSGT00390000006218 #24 ENSGT00940000160574 #25 ENSGT00440000034605 #26 ENSGT00390000016768 #28 ENSGT00940000154234.a #29 ENSGT00940000155379 #30 ENSGT00530000063822.a.a #31 ENSGT00940000156046 #32 ENSGT00390000001680 #33 ENSGT00940000159310 #34 ENSGT00940000160980 #35 ENSGT00390000018100 #36 ENSGT00940000157661 ENSGT00390000009140 American mink MODERN SPECIES 206 IFTAP (ENSNVIG00000010445) #20 RAG2 (ENSNVIG00000010515) #21 RAG1 (ENSNVIG00000010524) TRAF6 (ENSNVIG00000010526) #22 PRR5L (ENSNVIG00000010558) #23 COMMD9 (ENSNVIG00000010596) #24 LDLRAD3 (ENSNVIG00000010613) #25 TRIM44 (ENSNVIG00000010658) #26 FJX1 (ENSNVIG00000010696) #28 PAMR1 (ENSNVIG00000010713) #29 SLC1A2 (ENSNVIG00000010815) #30 CD44 (ENSNVIG00000011008) #31 PDHX (ENSNVIG00000011353) #32 APIP (ENSNVIG00000011384) #33 EHF (ENSNVIG00000011394) #34 ELF5 (ENSNVIG00000011461) #35 CAT (ENSNVIG00000011546) #36 ENSNVIG00000011573 ABTB2 (ENSNVIG00000011580) Ferret MODERN SPECIES 213 ENSMPUG00000011817 ENSMPUG00000019966 ENSMPUG00000011808 ENSMPUG00000011803 IFTAP (ENSMPUG00000011792) #20 RAG2 (ENSMPUG00000019965) #21 RAG1 (ENSMPUG00000019963) TRAF6 (ENSMPUG00000011785) #22 PRR5L (ENSMPUG00000011777) #23 COMMD9 (ENSMPUG00000011733) #24 LDLRAD3 (ENSMPUG00000011724) #25 TRIM44 (ENSMPUG00000011720) #26 PAMR1 (ENSMPUG00000011711) #29 ENSMPUG00000011703 SLC1A2 (ENSMPUG00000011697) #30 CD44 (ENSMPUG00000011692) #31 ENSMPUG00000011691 PDHX (ENSMPUG00000011686) #32 APIP (ENSMPUG00000011681) #33 ENSMPUG00000019961 EHF (ENSMPUG00000011676) #34 ELF5 (ENSMPUG00000011669) #35 CAT (ENSMPUG00000011661) #36 Canidae ANCESTRAL SPECIES 32 ENSGT00940000160990 ENSGT00390000017361 ENSGT00390000010778 ENSGT00390000012831 ENSGT00940000161196 ENSGT00390000016821 ENSGT00940000157226 ENSGT00940000154860 ENSGT00390000006196 ENSGT00390000010991 ENSGT00940000157405 ENSGT00940000153664.A.a.m.b.b.b ENSGT00390000013149 #20 ENSGT00390000012559 #21 ENSGT00390000008679 ENSGT00940000155426 #22 ENSGT00530000063981.b #23 ENSGT00390000006218 #24 ENSGT00940000160574 #25 ENSGT00440000034605 #26 ENSGT00390000016768 #28 ENSGT00940000154234.a #29 ENSGT00940000155379 #30 ENSGT00530000063822.b ##31 ENSGT00530000063822.a.a #31 ENSGT00940000156046 #32 ENSGT00390000001680 #33 ENSGT00940000159310 #34 ENSGT00940000160980 #35 ENSGT00390000018100 #36 ENSGT00940000157661 Canis_lupus ANCESTRAL SPECIES 7 ENSGT00940000160990 ENSGT00390000017361 ENSGT00390000010778 ENSGT00390000012831 ENSGT00940000161196 ENSGT00390000016821 ENSGT00940000157226 ENSGT00940000154860 ENSGT00390000006196 ENSGT00390000010991 ENSGT00940000157405 ENSGT00940000153664.A.a.m.b.b.b ENSGT00390000013149 #20 ENSGT00390000012559 #21 ENSGT00390000008679 ENSGT00940000155426 #22 ENSGT00530000063981.b #23 ENSGT00390000006218 #24 ENSGT00940000160574 #25 ENSGT00440000034605 #26 ENSGT00390000016768 #28 ENSGT00940000154234.a #29 ENSGT00940000155379 #30 ENSGT00530000063822.b ##31 ENSGT00530000063822.a.a #31 ENSGT00940000156046 #32 ENSGT00390000001680 #33 ENSGT00940000159310 #34 ENSGT00940000160980 #35 ENSGT00390000018100 #36 ENSGT00940000157661 Dingo MODERN SPECIES 69 TALDO1 (ENSCAFG00020006881) GATD1 (ENSCAFG00020006875) CEND1 (ENSCAFG00020006869) SLC25A22 (ENSCAFG00020006861) ENSCAFG00020006850 ALKBH3 (ENSCAFG00020006841) HSD17B12 (ENSCAFG00020006836) TTC17 (ENSCAFG00020006461) API5 (ENSCAFG00020006440) LRRC4C (ENSCAFG00020006434) ENSCAFG00020006430 ENSCAFG00020006429 IFTAP (ENSCAFG00020006414) #20 RAG2 (ENSCAFG00020006410) #21 RAG1 (ENSCAFG00020006408) TRAF6 (ENSCAFG00020006405) #22 PRR5L (ENSCAFG00020006403) #23 COMMD9 (ENSCAFG00020006401) #24 LDLRAD3 (ENSCAFG00020006398) #25 TRIM44 (ENSCAFG00020006383) #26 FJX1 (ENSCAFG00020006380) #28 PAMR1 (ENSCAFG00020006373) #29 SLC1A2 (ENSCAFG00020005675) #30 ENSCAFG00020005623 ##31 ENSCAFG00020005617 #31 PDHX (ENSCAFG00020005609) #32 APIP (ENSCAFG00020005596) #33 EHF (ENSCAFG00020005591) #34 ELF5 (ENSCAFG00020005583) #35 CAT (ENSCAFG00020005081) #36 ABTB2 (ENSCAFG00020004564) Dog MODERN SPECIES 9 CEND1 (ENSCAFG00845018474) ENSCAFG00845018530 ENSCAFG00845018740 HSD17B12 (ENSCAFG00845018875) TTC17 (ENSCAFG00845019080) API5 (ENSCAFG00845019464) ENSCAFG00845019746 ENSCAFG00845019858 ENSCAFG00845019880 ENSCAFG00845019925 SRP14 (ENSCAFG00845020059) ENSCAFG00845020075 C18H11orf74 (ENSCAFG00845020128) #20 RAG2 (ENSCAFG00845020240) #21 RAG1 (ENSCAFG00845020263) TRAF6 (ENSCAFG00845020292) #22 PRR5L (ENSCAFG00845020467) #23 COMMD9 (ENSCAFG00845020681) #24 LDLRAD3 (ENSCAFG00845020785) #25 TRIM44 (ENSCAFG00845020854) #26 PAMR1 (ENSCAFG00845020986) #29 FJX1 (ENSCAFG00845021321) #28 SLC1A2 (ENSCAFG00845021493) #30 ENSCAFG00845022224 CD44 (ENSCAFG00845022357) #31 PDHX (ENSCAFG00845023240) #32 ENSCAFG00845023357 #33 EHF (ENSCAFG00845023567) #34 ELF5 (ENSCAFG00845023760) #35 CAT (ENSCAFG00845024098) #36 ABTB2 (ENSCAFG00845024235) Red fox MODERN SPECIES 94 CUNH11orf74 (ENSVVUG00000006953) #20 RAG2 (ENSVVUG00000006959) #21 RAG1 (ENSVVUG00000006961) TRAF6 (ENSVVUG00000006963) #22 PRR5L (ENSVVUG00000006971) #23 COMMD9 (ENSVVUG00000006987) #24 LDLRAD3 (ENSVVUG00000006994) #25 TRIM44 (ENSVVUG00000007028) #26 PAMR1 (ENSVVUG00000007035) #29 SLC1A2 (ENSVVUG00000007051) #30 ENSVVUG00000007088 ENSVVUG00000007105 #31 PDHX (ENSVVUG00000007134) #32 APIP (ENSVVUG00000007155) #33 ENSVVUG00000007187 #34 ENSVVUG00000007189 #34 ELF5 (ENSVVUG00000007199) #35 CAT (ENSVVUG00000007313) #36 ABTB2 (ENSVVUG00000010052) Felidae ANCESTRAL SPECIES ENSGT01020000230401.a.a.a.i.b ENSGT00940000159662 ENSGT00940000156620 ENSGT00940000161101 ENSGT00940000162841 ENSGT00390000016821 ENSGT00940000157226 ENSGT00940000154860 ENSGT00390000006196 ENSGT00390000010991 ENSGT00940000157405 ENSGT01080000258056 ENSGT00390000013149 #20 ENSGT00390000012559 #21 ENSGT00390000008679 ENSGT00940000155426 #22 ENSGT00530000063981.b #23 ENSGT00390000006218 #24 ENSGT00940000160574 #25 ENSGT00440000034605 #26 ENSGT00390000016768 #28 ENSGT00940000154234.a #29 ENSGT00940000155379 #30 ENSGT00530000063822.a.a #31 ENSGT00940000156046 #32 ENSGT00390000001680 #33 ENSGT00940000159310 #34 ENSGT00940000160980 #35 ENSGT00390000018100 #36 ENSGT00940000157661 ENSGT00390000009140 Panthera ANCESTRAL SPECIES 13 ENSGT01020000230401.a.a.a.i.b ENSGT00940000159662 ENSGT00940000156620 ENSGT00940000161101 ENSGT00940000162841 ENSGT00390000016821 ENSGT00940000157226 ENSGT00940000154860 ENSGT00390000006196 ENSGT00390000010991 ENSGT00940000157405 ENSGT01080000258056 ENSGT00390000013149 #20 ENSGT00390000012559 #21 ENSGT00390000008679 ENSGT00940000155426 #22 ENSGT00530000063981.b #23 ENSGT00390000006218 #24 ENSGT00940000160574 #25 ENSGT00440000034605 #26 ENSGT00390000016768 #28 ENSGT00940000154234.a #29 ENSGT00940000155379 #30 ENSGT00530000063822.a.a #31 ENSGT00940000156046 #32 ENSGT00390000001680 #33 ENSGT00940000159310 #34 ENSGT00940000160980 #35 ENSGT00390000018100 #36 ENSGT00940000157661 ENSGT00390000009140 Panthera_a ANCESTRAL SPECIES 20 ENSGT01020000230401.a.a.a.i.b ENSGT00940000159662 ENSGT00940000156620 ENSGT00940000161101 ENSGT00940000162841 ENSGT00390000016821 ENSGT00940000157226 ENSGT00940000154860 ENSGT00390000006196 ENSGT00390000010991 ENSGT00940000157405 ENSGT01080000258056 ENSGT00390000013149 #20 ENSGT00390000012559 #21 ENSGT00390000008679 ENSGT00940000155426 #22 ENSGT00530000063981.b #23 ENSGT00390000006218 #24 ENSGT00940000160574 #25 ENSGT00440000034605 #26 ENSGT00390000016768 #28 ENSGT00940000154234.a #29 ENSGT00940000155379 #30 ENSGT00530000063822.a.a #31 ENSGT00940000156046 #32 ENSGT00390000001680 #33 ENSGT00940000159310 #34 ENSGT00940000160980 #35 ENSGT00390000018100 #36 ENSGT00940000157661 ENSGT00390000009140 lion MODERN SPECIES 10 CD82 (ENSPLOG00000009416) ALX4 (ENSPLOG00000009372) EXT2 (ENSPLOG00000009265) ACCS (ENSPLOG00000009169) ACCSL (ENSPLOG00000009077) C11orf96 (ENSPLOG00000009053) ALKBH3 (ENSPLOG00000009033) HSD17B12 (ENSPLOG00000008903) TTC17 (ENSPLOG00000008790) API5 (ENSPLOG00000008595) LRRC4C (ENSPLOG00000008513) ENSPLOG00000008507 ENSPLOG00000008466 #20 RAG2 (ENSPLOG00000008456) #21 RAG1 (ENSPLOG00000008443) TRAF6 (ENSPLOG00000008425) #22 PRR5L (ENSPLOG00000008389) #23 COMMD9 (ENSPLOG00000008326) #24 LDLRAD3 (ENSPLOG00000008283) #25 TRIM44 (ENSPLOG00000008259) #26 FJX1 (ENSPLOG00000008243) #28 PAMR1 (ENSPLOG00000008067) #29 SLC1A2 (ENSPLOG00000007683) #30 CD44 (ENSPLOG00000007114) #31 PDHX (ENSPLOG00000006867) #32 APIP (ENSPLOG00000006818) #33 EHF (ENSPLOG00000006746) #34 ELF5 (ENSPLOG00000006649) #35 CAT (ENSPLOG00000006594) #36 ABTB2 (ENSPLOG00000006563) NAT10 (ENSPLOG00000006429) leopard MODERN SPECIES 58 ENSPPRG00000000608 ALX4 (ENSPPRG00000001680) EXT2 (ENSPPRG00000004504) ACCS (ENSPPRG00000004897) ACCSL (ENSPPRG00000005058) C11orf96 (ENSPPRG00000014216) ALKBH3 (ENSPPRG00000005278) HSD17B12 (ENSPPRG00000006417) TTC17 (ENSPPRG00000007478) API5 (ENSPPRG00000009130) LRRC4C (ENSPPRG00000014339) ENSPPRG00000010539 IFTAP (ENSPPRG00000011787) #20 RAG2 (ENSPPRG00000014398) #21 RAG1 (ENSPPRG00000014408) TRAF6 (ENSPPRG00000014400) #22 PRR5L (ENSPPRG00000016644) #23 COMMD9 (ENSPPRG00000019409) #24 LDLRAD3 (ENSPPRG00000021111) #25 TRIM44 (ENSPPRG00000024621) #26 FJX1 (ENSPPRG00000014592) #28 PAMR1 (ENSPPRG00000024334) #29 SLC1A2 (ENSPPRG00000023959) #30 CD44 (ENSPPRG00000000038) #31 PDHX (ENSPPRG00000001608) #32 APIP (ENSPPRG00000001755) #33 EHF (ENSPPRG00000003174) #34 ELF5 (ENSPPRG00000004467) #35 CAT (ENSPPRG00000004841) #36 ABTB2 (ENSPPRG00000005727) NAT10 (ENSPPRG00000010254) Tiger MODERN SPECIES 167 PRDM11 (ENSPTIG00000006200) TP53I11 (ENSPTIG00000005398) TSPAN18 (ENSPTIG00000005160) CD82 (ENSPTIG00000001923) ALX4 (ENSPTIG00000020743) EXT2 (ENSPTIG00000019939) ACCS (ENSPTIG00000019737) ACCSL (ENSPTIG00000019690) ALKBH3 (ENSPTIG00000019393) HSD17B12 (ENSPTIG00000019106) TTC17 (ENSPTIG00000018326) API5 (ENSPTIG00000016928) IFTAP (ENSPTIG00000016603) #20 RAG2 (ENSPTIG00000010550) #21 RAG1 (ENSPTIG00000010538) TRAF6 (ENSPTIG00000016499) #22 PRR5L (ENSPTIG00000016288) #23 COMMD9 (ENSPTIG00000015891) #24 LDLRAD3 (ENSPTIG00000015733) #25 TRIM44 (ENSPTIG00000015209) #26 PAMR1 (ENSPTIG00000014525) #29 SLC1A2 (ENSPTIG00000014147) #30 ENSPTIG00000013480 #31 PDHX (ENSPTIG00000012744) #32 APIP (ENSPTIG00000012600) #33 EHF (ENSPTIG00000012053) #34 ELF5 (ENSPTIG00000011739) #35 CAT (ENSPTIG00000011430) #36 ABTB2 (ENSPTIG00000011181) NAT10 (ENSPTIG00000010705) CAPRIN1 (ENSPTIG00000009952) Cat MODERN SPECIES 241 PRDM11 (ENSFCAG00000006658) TP53I11 (ENSFCAG00000044947) TSPAN18 (ENSFCAG00000004186) CD82 (ENSFCAG00000012861) ENSFCAG00000035141 ALX4 (ENSFCAG00000005620) EXT2 (ENSFCAG00000005619) ACCSL (ENSFCAG00000005617) HSD17B12 (ENSFCAG00000022122) TTC17 (ENSFCAG00000023058) API5 (ENSFCAG00000031994) LRRC4C (ENSFCAG00000027958) ENSFCAG00000030215 CD1H11orf74 (ENSFCAG00000039567) #20 RAG2 (ENSFCAG00000002909) #21 TRAF6 (ENSFCAG00000036371) #22 PRR5L (ENSFCAG00000028983) #23 COMMD9 (ENSFCAG00000038308) #24 LDLRAD3 (ENSFCAG00000040060) #25 TRIM44 (ENSFCAG00000025850) #26 FJX1 (ENSFCAG00000046575) #28 PAMR1 (ENSFCAG00000005892) #29 SLC1A2 (ENSFCAG00000005890) #30 CD44 (ENSFCAG00000005887) #31 PDHX (ENSFCAG00000023884) #32 APIP (ENSFCAG00000002557) #33 EHF (ENSFCAG00000036037) #34 ELF5 (ENSFCAG00000022294) #35 CAT (ENSFCAG00000002030) #36 ABTB2 (ENSFCAG00000002029) NAT10 (ENSFCAG00000002028) Laurasiatheria_c ANCESTRAL SPECIES 9 ENSGT00940000158481 ENSGT00940000159662 ENSGT00940000156620 ENSGT00940000161101 ENSGT00940000162841 ENSGT00390000016821 ENSGT00940000157226 ENSGT00940000154860 ENSGT00520000059086 ENSGT00390000006196 ENSGT00390000010991 ENSGT00940000157405 ENSGT00390000013149 #20 ENSGT00390000012559 #21 ENSGT00390000008679 ENSGT00940000155426 #22 ENSGT00530000063981.b #23 ENSGT00390000006218 #24 ENSGT00940000160574 #25 ENSGT00440000034605 #26 ENSGT00390000016768 #28 ENSGT00940000154234.a #29 ENSGT00940000155379 #30 ENSGT00530000063822.a.a #31 ENSGT00940000156046 #32 ENSGT00390000001680 #33 ENSGT00940000159310 #34 ENSGT00940000160980 #35 ENSGT00390000018100 #36 ENSGT00940000157661 ENSGT00390000009140 Chiroptera ANCESTRAL SPECIES 5 ENSGT00940000157667 ENSGT00940000158481 ENSGT00940000159662 ENSGT00940000156620 ENSGT00940000161101 ENSGT00940000162841 ENSGT00390000016821 ENSGT00940000157226 ENSGT00940000154860 ENSGT00520000059086 ENSGT00390000006196 ENSGT00390000010991 ENSGT00390000013149 #20 ENSGT00390000012559 #21 ENSGT00390000008679 ENSGT00940000155426 #22 ENSGT00530000063981.b #23 ENSGT00390000006218 #24 ENSGT00940000160574 #25 ENSGT00440000034605 #26 ENSGT00390000016768 #28 ENSGT00940000154234.a #29 ENSGT00940000155379 #30 ENSGT00530000063822.a.a #31 ENSGT00940000156046 #32 ENSGT00390000001680 #33 ENSGT00940000159310 #34 ENSGT00940000160980 #35 ENSGT00390000018100 #36 ENSGT00940000157661 ENSGT00390000009140 Microchiroptera ANCESTRAL SPECIES 31 ENSGT00940000157667 ENSGT00940000158481 ENSGT00940000159662 ENSGT00940000156620 ENSGT00940000161101 ENSGT00940000162841 ENSGT00390000016821 ENSGT00940000157226 ENSGT00940000154860 ENSGT00520000059086 ENSGT00390000006196 ENSGT00390000010991 ENSGT00390000013149 #20 ENSGT00390000012559 #21 ENSGT00390000008679 ENSGT00940000155426 #22 ENSGT00530000063981.b #23 ENSGT00390000006218 #24 ENSGT00940000160574 #25 ENSGT00440000034605 #26 ENSGT00390000016768 #28 ENSGT00940000154234.a #29 ENSGT00940000155379 #30 ENSGT00530000063822.a.a #31 ENSGT00940000156046 #32 ENSGT00390000001680 #33 ENSGT00940000159310 #34 ENSGT00940000160980 #35 ENSGT00390000018100 #36 ENSGT00940000157661 ENSGT00390000009140 Greater horseshoe bat MODERN SPECIES 2 C11orf96 (ENSRFEG00010004030) ALKBH3 (ENSRFEG00010004046) HSD17B12 (ENSRFEG00010004074) TTC17 (ENSRFEG00010004131) API5 (ENSRFEG00010004247) ENSRFEG00010004309 ENSRFEG00010004319 LRRC4C (ENSRFEG00010004345) ENSRFEG00010004357 ENSRFEG00010004372 ENSRFEG00010004383 IFTAP (ENSRFEG00010004417) #20 ENSRFEG00010004464 RAG2 (ENSRFEG00010004473) #21 RAG1 (ENSRFEG00010004482) TRAF6 (ENSRFEG00010004489) #22 PRR5L (ENSRFEG00010004515) #23 COMMD9 (ENSRFEG00010004551) #24 LDLRAD3 (ENSRFEG00010004588) #25 TRIM44 (ENSRFEG00010004609) #26 FJX1 (ENSRFEG00010004625) #28 PAMR1 (ENSRFEG00010004646) #29 SLC1A2 (ENSRFEG00010004715) #30 CD44 (ENSRFEG00010004816) #31 PDHX (ENSRFEG00010004865) #32 APIP (ENSRFEG00010004888) #33 EHF (ENSRFEG00010004916) #34 ELF5 (ENSRFEG00010004964) #35 CAT (ENSRFEG00010004980) #36 ENSRFEG00010004989 ABTB2 (ENSRFEG00010004996) Microbat MODERN SPECIES 1225 ENSMLUG00000029589 IFTAP (ENSMLUG00000000555) #20 RAG2 (ENSMLUG00000000551) #21 RAG1 (ENSMLUG00000000544) TRAF6 (ENSMLUG00000003605) #22 PRR5L (ENSMLUG00000003601) #23 COMMD9 (ENSMLUG00000003600) #24 LDLRAD3 (ENSMLUG00000003596) #25 Megabat MODERN SPECIES 2426 IFTAP (ENSPVAG00000004733) #20 RAG2 (ENSPVAG00000004731) #21 TRAF6 (ENSPVAG00000004727) #22 Equus ANCESTRAL SPECIES 56 ENSGT00940000157667 ENSGT00940000158481 ENSGT00940000159662 ENSGT00940000156620 ENSGT00940000161101 ENSGT00940000162841 ENSGT00390000016821 ENSGT00940000157226 ENSGT00940000154860 ENSGT00390000006196 ENSGT00390000010991 ENSGT00940000157405 ENSGT00390000013149 #20 ENSGT00390000012559 #21 ENSGT00390000008679 ENSGT00940000155426 #22 ENSGT00530000063981.b #23 ENSGT00390000006218 #24 ENSGT00940000160574 #25 ENSGT00440000034605 #26 ENSGT00390000016768 #28 ENSGT00940000154234.a #29 ENSGT00940000155379 #30 ENSGT00530000063822.a.a #31 ENSGT00390000004856.w.a.a.b.b.a.a ENSGT00940000156046 #32 ENSGT00390000001680 #33 ENSGT00940000159310 #34 ENSGT00940000160980 #35 ENSGT00390000018100 #36 ENSGT00940000157661 Horse MODERN SPECIES 3 CD82 (ENSECAG00000020051) ALX4 (ENSECAG00000019892) EXT2 (ENSECAG00000015881) ACCS (ENSECAG00000013484) ACCSL (ENSECAG00000011908) ALKBH3 (ENSECAG00000010673) HSD17B12 (ENSECAG00000010538) ENSECAG00000057228 TTC17 (ENSECAG00000000753) API5 (ENSECAG00000047216) ENSECAG00000002481 LRRC4C (ENSECAG00000022329) IFTAP (ENSECAG00000022013) #20 RAG2 (ENSECAG00000021988) #21 RAG1 (ENSECAG00000021936) TRAF6 (ENSECAG00000021091) #22 PRR5L (ENSECAG00000020162) #23 COMMD9 (ENSECAG00000019749) #24 ENSECAG00000046809 ENSECAG00000053975 LDLRAD3 (ENSECAG00000019236) #25 TRIM44 (ENSECAG00000018868) #26 FJX1 (ENSECAG00000006501) #28 PAMR1 (ENSECAG00000018049) #29 SLC1A2 (ENSECAG00000015644) #30 CD44 (ENSECAG00000010267) #31 ENSECAG00000006372 PDHX (ENSECAG00000008611) #32 APIP (ENSECAG00000006357) #33 EHF (ENSECAG00000000752) #34 ELF5 (ENSECAG00000023321) #35 Donkey MODERN SPECIES 8 CD82 (ENSEASG00005014890) ALX4 (ENSEASG00005014886) EXT2 (ENSEASG00005014877) ACCS (ENSEASG00005014868) ACCSL (ENSEASG00005014863) C11orf96 (ENSEASG00005014860) ALKBH3 (ENSEASG00005014856) HSD17B12 (ENSEASG00005014853) TTC17 (ENSEASG00005014829) API5 (ENSEASG00005014816) ENSEASG00005014801 LRRC4C (ENSEASG00005014797) IFTAP (ENSEASG00005013541) #20 RAG2 (ENSEASG00005013540) #21 RAG1 (ENSEASG00005013538) TRAF6 (ENSEASG00005033142) #22 PRR5L (ENSEASG00005013530) #23 COMMD9 (ENSEASG00005013520) #24 LDLRAD3 (ENSEASG00005025501) #25 TRIM44 (ENSEASG00005020267) #26 FJX1 (ENSEASG00005020266) #28 PAMR1 (ENSEASG00005020262) #29 SLC1A2 (ENSEASG00005020253) #30 CD44 (ENSEASG00005020242) #31 ENSEASG00005020239 PDHX (ENSEASG00005020238) #32 ENSEASG00005027939 #33 EHF (ENSEASG00005020235) #34 ELF5 (ENSEASG00005020232) #35 CAT (ENSEASG00005020225) #36 ABTB2 (ENSEASG00005020219) Euarchontoglires ANCESTRAL SPECIES 1 ENSGT00940000158481 ENSGT00940000159662 ENSGT00940000156620 ENSGT00940000161101 ENSGT00940000162841 ENSGT00390000016821 ENSGT00940000157226 ENSGT00940000154860 ENSGT00520000059086 ENSGT00390000006196 ENSGT00390000010991 ENSGT00940000157405 ENSGT00390000013149 #20 ENSGT00390000012559 #21 ENSGT00390000008679 ENSGT00940000155426 #22 ENSGT00530000063981.b #23 ENSGT00390000006218 #24 ENSGT00940000160574 #25 ENSGT00440000034605 #26 ENSGT00390000016768 #28 ENSGT00940000154234.a #29 ENSGT00940000155379 #30 ENSGT00530000063822.a.a #31 ENSGT00940000156046 #32 ENSGT00390000001680 #33 ENSGT00940000159310 #34 ENSGT00940000160980 #35 ENSGT00390000018100 #36 ENSGT00940000157661 ENSGT00390000009140 Primates ANCESTRAL SPECIES ENSGT00940000158481 ENSGT00940000159662 ENSGT00940000156620 ENSGT00940000161101 ENSGT00940000162841 ENSGT00390000016821 ENSGT00940000157226 ENSGT00940000154860 ENSGT00520000059086 ENSGT00390000006196 ENSGT00390000010991 ENSGT00940000157405 ENSGT00390000013149 #20 ENSGT00390000012559 #21 ENSGT00390000008679 ENSGT00940000155426 #22 ENSGT00530000063981.b #23 ENSGT00390000006218 #24 ENSGT00940000160574 #25 ENSGT00440000034605 #26 ENSGT00390000016768 #28 ENSGT00940000154234.a #29 ENSGT00940000155379 #30 ENSGT00530000063822.a.a #31 ENSGT00940000156046 #32 ENSGT00390000001680 #33 ENSGT00940000159310 #34 ENSGT00940000160980 #35 ENSGT00390000018100 #36 ENSGT00940000157661 ENSGT00390000009140 Strepsirrhini ANCESTRAL SPECIES 6 ENSGT00940000157667 ENSGT00940000158481 ENSGT00940000159662 ENSGT00940000156620 ENSGT00940000161101 ENSGT00940000162841 ENSGT00390000016821 ENSGT00940000157226 ENSGT00940000154860 ENSGT00390000006196 ENSGT00390000010991 ENSGT00940000157405 ENSGT00390000013149 #20 ENSGT00390000012559 #21 ENSGT00390000008679 ENSGT00940000155426 #22 ENSGT00530000063981.b #23 ENSGT00390000006218 #24 ENSGT00940000160574 #25 ENSGT00440000034605 #26 ENSGT00390000016768 #28 ENSGT00940000154234.a #29 ENSGT00940000155379 #30 ENSGT00530000063822.a.a #31 ENSGT00940000156046 #32 ENSGT00390000001680 #33 ENSGT00940000159310 #34 ENSGT00940000160980 #35 ENSGT00390000018100 #36 ENSGT00940000157661 ENSGT00390000009140 Lemuriformes ANCESTRAL SPECIES 16 ENSGT00940000157667 ENSGT00940000158481 ENSGT00940000159662 ENSGT00940000156620 ENSGT00940000161101 ENSGT00940000162841 ENSGT00390000016821 ENSGT00940000157226 ENSGT00940000154860 ENSGT00390000006196 ENSGT00390000010991 ENSGT00940000157405 ENSGT00390000013149 #20 ENSGT00390000012559 #21 ENSGT00390000008679 ENSGT00940000155426 #22 ENSGT00530000063981.b #23 ENSGT00390000006218 #24 ENSGT00940000160574 #25 ENSGT00440000034605 #26 ENSGT00390000016768 #28 ENSGT00940000154234.a #29 ENSGT00940000155379 #30 ENSGT00530000063822.a.a #31 ENSGT00940000156046 #32 ENSGT00390000001680 #33 ENSGT00940000159310 #34 ENSGT00940000160980 #35 ENSGT00390000018100 #36 ENSGT00940000157661 ENSGT00390000009140 Mouse lemur MODERN SPECIES 27 CD82 (ENSMICG00000010264) ALX4 (ENSMICG00000048133) EXT2 (ENSMICG00000014680) ENSMICG00000028094 ACCS (ENSMICG00000007981) ACCSL (ENSMICG00000014661) ENSMICG00000034539 C11orf96 (ENSMICG00000041610) ALKBH3 (ENSMICG00000014651) HSD17B12 (ENSMICG00000014632) TTC17 (ENSMICG00000014602) ENSMICG00000014581 LRRC4C (ENSMICG00000047157) ENSMICG00000043108 IFTAP (ENSMICG00000008620) #20 TRAF6 (ENSMICG00000008604) #22 PRR5L (ENSMICG00000047184) #23 COMMD9 (ENSMICG00000008594) #24 LDLRAD3 (ENSMICG00000008590) #25 TRIM44 (ENSMICG00000008587) #26 FJX1 (ENSMICG00000033879) #28 PAMR1 (ENSMICG00000003733) #29 SLC1A2 (ENSMICG00000003719) #30 CD44 (ENSMICG00000003713) #31 ENSMICG00000036406 PDHX (ENSMICG00000003700) #32 APIP (ENSMICG00000003696) #33 EHF (ENSMICG00000003694) #34 ENSMICG00000038699 ELF5 (ENSMICG00000003689) #35 CAT (ENSMICG00000003672) #36 Lemuriformes_a ANCESTRAL SPECIES 92 ENSGT00390000012559 #21 ENSGT00390000008679 ENSGT00940000155426 #22 ENSGT00530000063981.b #23 ENSGT00390000006218 #24 ENSGT00940000160574 #25 ENSGT00440000034605 #26 ENSGT00390000016768 #28 ENSGT00940000154234.a #29 ENSGT00940000155379 #30 ENSGT00530000063822.a.a #31 ENSGT00940000156046 #32 ENSGT00390000001680 #33 ENSGT00940000159310 #34 ENSGT00940000160980 #35 ENSGT00390000018100 #36 ENSGT00940000157661 ENSGT00390000009140 Greater bamboo lemur MODERN SPECIES 820 RAG2 (ENSPSMG00000025673) #21 RAG1 (ENSPSMG00000025677) TRAF6 (ENSPSMG00000025679) #22 PRR5L (ENSPSMG00000025683) #23 COMMD9 (ENSPSMG00000025691) #24 LDLRAD3 (ENSPSMG00000025694) #25 TRIM44 (ENSPSMG00000025695) #26 FJX1 (ENSPSMG00000025697) #28 PAMR1 (ENSPSMG00000025723) #29 SLC1A2 (ENSPSMG00000025760) #30 ENSPSMG00000025770 #31 ENSPSMG00000025776 ##31 PDHX (ENSPSMG00000025782) #32 APIP (ENSPSMG00000025789) #33 ENSPSMG00000025796 #34 Coquerels sifaka MODERN SPECIES 425 IFTAP (ENSPCOG00000014571) #20 TRAF6 (ENSPCOG00000002649) #22 PRR5L (ENSPCOG00000016168) #23 COMMD9 (ENSPCOG00000027062) #24 LDLRAD3 (ENSPCOG00000018799) #25 TRIM44 (ENSPCOG00000017249) #26 FJX1 (ENSPCOG00000012141) #28 PAMR1 (ENSPCOG00000021819) #29 SLC1A2 (ENSPCOG00000024058) #30 CD44 (ENSPCOG00000025918) #31 PDHX (ENSPCOG00000018230) #32 APIP (ENSPCOG00000000871) #33 EHF (ENSPCOG00000015717) #34 ELF5 (ENSPCOG00000021457) #35 CAT (ENSPCOG00000017699) #36 ABTB2 (ENSPCOG00000028529) NAT10 (ENSPCOG00000009633) Bushbaby MODERN SPECIES 116 EXT2 (ENSOGAG00000013459) ACCS (ENSOGAG00000013457) ENSOGAG00000013452 ENSOGAG00000028628 ALKBH3 (ENSOGAG00000009107) HSD17B12 (ENSOGAG00000009102) TTC17 (ENSOGAG00000013632) API5 (ENSOGAG00000013625) LRRC4C (ENSOGAG00000001283) ENSOGAG00000025009 ENSOGAG00000031537 ENSOGAG00000029194 IFTAP (ENSOGAG00000011890) #20 ENSOGAG00000031605 #21 ENSOGAG00000027339 TRAF6 (ENSOGAG00000007506) #22 PRR5L (ENSOGAG00000007503) #23 COMMD9 (ENSOGAG00000016261) #24 LDLRAD3 (ENSOGAG00000016253) #25 ENSOGAG00000030890 TRIM44 (ENSOGAG00000016248) #26 FJX1 (ENSOGAG00000027707) #28 PAMR1 (ENSOGAG00000016246) #29 SLC1A2 (ENSOGAG00000016241) #30 CD44 (ENSOGAG00000016233) #31 PDHX (ENSOGAG00000015641) #32 APIP (ENSOGAG00000015637) #33 EHF (ENSOGAG00000015942) #34 ELF5 (ENSOGAG00000006242) #35 CAT (ENSOGAG00000006240) #36 ABTB2 (ENSOGAG00000000457) Haplorrhini ANCESTRAL SPECIES ENSGT00940000158481 ENSGT00940000159662 ENSGT00940000156620 ENSGT00940000161101 ENSGT00940000162841 ENSGT00390000016821 ENSGT00940000157226 ENSGT00940000154860 ENSGT00520000059086 ENSGT00390000006196 ENSGT00390000010991 ENSGT00940000157405 ENSGT00390000013149 #20 ENSGT00390000012559 #21 ENSGT00390000008679 ENSGT00940000155426 #22 ENSGT00530000063981.b #23 ENSGT00390000006218 #24 ENSGT00940000160574 #25 ENSGT00440000034605 #26 ENSGT00390000016768 #28 ENSGT00940000154234.a #29 ENSGT00940000155379 #30 ENSGT00530000063822.a.a #31 ENSGT00940000156046 #32 ENSGT00390000001680 #33 ENSGT00940000159310 #34 ENSGT00940000160980 #35 ENSGT00390000018100 #36 ENSGT00940000157661 ENSGT00390000009140 Simiiformes ANCESTRAL SPECIES ENSGT00940000159662 ENSGT00940000156620 ENSGT00940000161101 ENSGT00940000162841 ENSGT00390000016821 ENSGT00940000157226 ENSGT00940000154860 ENSGT00520000059086 ENSGT00390000006196 ENSGT00950000183087.A.b.a ENSGT00390000010991 ENSGT00940000157405 ENSGT00390000013149 #20 ENSGT00390000012559 #21 ENSGT00390000008679 ENSGT00940000155426 #22 ENSGT00530000063981.b #23 ENSGT00390000006218 #24 ENSGT00940000160574 #25 ENSGT00440000034605 #26 ENSGT00390000016768 #28 ENSGT00940000154234.a #29 ENSGT00940000155379 #30 ENSGT00910000147087 ENSGT00530000063822.a.a #31 ENSGT00940000156046 #32 ENSGT00390000001680 #33 ENSGT00940000159310 #34 ENSGT00940000160980 #35 ENSGT00390000018100 #36 ENSGT00940000157661 Catarrhini DUPLICATION Catarrhini ANCESTRAL SPECIES 1 ENSGT00940000161101 ENSGT00940000162841 ENSGT00390000016821 ENSGT00940000157226 ENSGT00950000183070.a.b.g.b.b.a.b ENSGT00940000154860.q ENSGT00940000154430.e.b ENSGT00520000059086 ENSGT00390000006196 ENSGT00950000183087.A.b.a ENSGT00390000010991.e ENSGT00940000157405 ENSGT00390000013149 #20 ENSGT00390000012559 #21 ENSGT00390000008679 ENSGT00940000155426.s #22 ENSGT00530000063981.b #23 ENSGT00390000006218 #24 ENSGT00940000160574 #25 ENSGT00440000034605 #26 ENSGT00390000016768 #28 ENSGT00940000154234.a #29 ENSGT00940000155379 #30 ENSGT00910000147087 ENSGT00530000063822.a.a #31 ENSGT00940000156046 #32 ENSGT00390000001680 #33 ENSGT00940000159310 #34 ENSGT00940000160980 #35 ENSGT00390000018100 #36 ENSGT00940000157661 Hominoidea ANCESTRAL SPECIES 1 ENSGT00940000158481 ENSGT00940000159662 ENSGT00940000156620 ENSGT00940000161101 ENSGT00940000162841 ENSGT00390000016821 ENSGT00940000157226 ENSGT00950000183070.a.b.g.b.b.a.b ENSGT00940000154860.q ENSGT00390000006196 ENSGT00390000010991.e ENSGT00940000157405 ENSGT00390000013149 #20 ENSGT00390000012559 #21 ENSGT00390000008679 ENSGT00940000155426.s #22 ENSGT00530000063981.b #23 ENSGT00390000006218 #24 ENSGT00940000160574 #25 ENSGT00940000153309.c.b.a.b.b.a.b.b ENSGT00910000147182 ENSGT00440000034605 #26 ENSGT00390000016768 #28 ENSGT00940000154234.a #29 ENSGT00940000155379 #30 ENSGT00910000147087 ENSGT00530000063822.a.a #31 ENSGT00940000156046 #32 ENSGT00390000001680 #33 ENSGT00940000159310 #34 ENSGT00940000160980 #35 Hominidae ANCESTRAL SPECIES 1 ENSGT00940000158481 ENSGT00940000159662 ENSGT00940000156620 ENSGT00940000161101 ENSGT00940000162841 ENSGT00390000016821 ENSGT00940000157226 ENSGT00950000183070.a.b.g.b.b.a.b ENSGT00940000154860.q ENSGT00390000006196 ENSGT00390000010991.e ENSGT00940000157405 ENSGT00390000013149 #20 ENSGT00390000012559 #21 ENSGT00390000008679 ENSGT00940000155426.s #22 ENSGT00530000063981.b #23 ENSGT00390000006218 #24 ENSGT00940000160574 #25 ENSGT00940000153309.c.b.a.b.b.a.b.b ENSGT00910000147182 ENSGT00440000034605 #26 ENSGT00390000016768 #28 ENSGT00940000154234.a #29 ENSGT00940000155379 #30 ENSGT00910000147087 ENSGT00530000063822.a.a #31 ENSGT00940000156046 #32 ENSGT00390000001680 #33 ENSGT00940000159310 #34 ENSGT00940000160980 #35 Homo/Pan/Gorilla group ANCESTRAL SPECIES 20 ENSGT00940000159662 ENSGT00940000156620 ENSGT00940000161101 ENSGT00940000162841 ENSGT00390000016821 ENSGT00940000157226 ENSGT00950000183070.a.b.g.b.b.a.b ENSGT00940000154860.q ENSGT00940000154430.e.b ENSGT00390000006196 ENSGT00390000010991.e ENSGT00940000157405 ENSGT00390000013149 #20 ENSGT00390000012559 #21 ENSGT00390000008679 ENSGT00940000155426.s #22 ENSGT00530000063981.b #23 ENSGT00390000006218 #24 ENSGT00940000160574 #25 ENSGT00940000153309.c.b.a.b.b.a.b.b ENSGT00910000147182 ENSGT00440000034605 #26 ENSGT00390000016768 #28 ENSGT00940000154234.a #29 ENSGT00940000155379 #30 ENSGT00910000147087 ENSGT00530000063822.a.a #31 ENSGT00940000156046 #32 ENSGT00390000001680 #33 ENSGT00940000159310 #34 ENSGT00940000160980 #35 Homo/Pan group ANCESTRAL SPECIES 1 ENSGT00940000159662 ENSGT00940000156620 ENSGT00940000161101 ENSGT00940000162841 ENSGT00390000016821 ENSGT00940000157226 ENSGT00950000183070.a.b.g.b.b.a.b ENSGT00940000154860.q ENSGT00940000154430.e.b ENSGT00390000006196 ENSGT00390000010991.e ENSGT00940000157405 ENSGT00390000013149 #20 ENSGT00390000012559 #21 ENSGT00390000008679 ENSGT00940000155426.s #22 ENSGT00530000063981.b #23 ENSGT00390000006218 #24 ENSGT00940000160574 #25 ENSGT00440000034605 #26 ENSGT00390000016768 #28 ENSGT00940000154234.a #29 ENSGT00940000155379 #30 ENSGT00910000147087 ENSGT00530000063822.a.a #31 ENSGT00940000156046 #32 ENSGT00390000001680 #33 ENSGT00940000159310 #34 ENSGT00940000160980 #35 ENSGT00390000018100 #36 ENSGT00940000157661 Pan ANCESTRAL SPECIES 1 ENSGT00940000158481 ENSGT00940000159662 ENSGT00940000156620 ENSGT00940000162841 ENSGT00390000016821 ENSGT00940000157226 ENSGT00950000183070.a.b.g.b.b.a.b ENSGT00940000154860.q ENSGT00940000154430.e.b ENSGT00390000006196 ENSGT00390000010991.e ENSGT00940000157405 ENSGT00390000013149 #20 ENSGT00390000012559 #21 ENSGT00390000008679 ENSGT00940000155426.s #22 ENSGT00530000063981.b #23 ENSGT00390000006218 #24 ENSGT00940000160574 #25 ENSGT00940000153309.c.b.a.b.b.a.b.b ENSGT00440000034605 #26 ENSGT00390000016768 #28 ENSGT00940000154234.a #29 ENSGT00940000155379 #30 ENSGT00910000147087 ENSGT00530000063822.a.a #31 ENSGT00940000156046 #32 ENSGT00390000001680 #33 ENSGT00940000159310 #34 ENSGT00940000160980 #35 ENSGT00390000018100 #36 Chimpanzee MODERN SPECIES 2 ALX4 (ENSPTRG00000003529) EXT2 (ENSPTRG00000003528) ACCSL (ENSPTRG00000028662) ENSPTRG00000046726 ENSPTRG00000047659 ALKBH3 (ENSPTRG00000003523) ENSPTRG00000047126 HSD17B12 (ENSPTRG00000003522) ENSPTRG00000048907 TTC17 (ENSPTRG00000003518) API5 (ENSPTRG00000003516) LRRC4C (ENSPTRG00000003515) IFTAP (ENSPTRG00000003514) #20 RAG2 (ENSPTRG00000003513) #21 RAG1 (ENSPTRG00000050436) TRAF6 (ENSPTRG00000003510) #22 PRR5L (ENSPTRG00000003509) #23 COMMD9 (ENSPTRG00000049063) #24 LDLRAD3 (ENSPTRG00000003507) #25 ENSPTRG00000044139 TRIM44 (ENSPTRG00000003504) #26 FJX1 (ENSPTRG00000041394) #28 PAMR1 (ENSPTRG00000003503) #29 SLC1A2 (ENSPTRG00000003502) #30 ENSPTRG00000048633 CD44 (ENSPTRG00000003501) #31 PDHX (ENSPTRG00000003500) #32 APIP (ENSPTRG00000003499) #33 EHF (ENSPTRG00000003498) #34 ELF5 (ENSPTRG00000003497) #35 CAT (ENSPTRG00000003496) #36 Bonobo MODERN SPECIES 2 CD82 (ENSPPAG00000022324) EXT2 (ENSPPAG00000041401) ACCSL (ENSPPAG00000033128) ENSPPAG00000033790 ENSPPAG00000033607 ALKBH3 (ENSPPAG00000028729) ENSPPAG00000043963 HSD17B12 (ENSPPAG00000041012) ENSPPAG00000035030 TTC17 (ENSPPAG00000036754) API5 (ENSPPAG00000035313) LRRC4C (ENSPPAG00000005583) IFTAP (ENSPPAG00000024881) #20 RAG2 (ENSPPAG00000004799) #21 RAG1 (ENSPPAG00000043768) TRAF6 (ENSPPAG00000042961) #22 PRR5L (ENSPPAG00000042360) #23 COMMD9 (ENSPPAG00000036714) #24 LDLRAD3 (ENSPPAG00000025202) #25 ENSPPAG00000034541 TRIM44 (ENSPPAG00000002641) #26 ENSPPAG00000041553 #28 PAMR1 (ENSPPAG00000025516) #29 SLC1A2 (ENSPPAG00000030524) #30 ENSPPAG00000037465 CD44 (ENSPPAG00000043653) #31 PDHX (ENSPPAG00000030642) #32 ENSPPAG00000034280 #33 EHF (ENSPPAG00000035904) #34 ELF5 (ENSPPAG00000031806) #35 CAT (ENSPPAG00000039204) #36 Human MODERN SPECIES 2 TSPAN18 (ENSG00000157570) CD82 (ENSG00000085117) ALX4 (ENSG00000052850) EXT2 (ENSG00000151348) ACCS (ENSG00000110455) ACCSL (ENSG00000205126) C11orf96 (ENSG00000187479) ALKBH3 (ENSG00000166199) HSD17B12 (ENSG00000149084) TTC17 (ENSG00000052841) API5 (ENSG00000166181) LRRC4C (ENSG00000148948) IFTAP (ENSG00000166352) #20 RAG2 (ENSG00000175097) #21 RAG1 (ENSG00000166349) TRAF6 (ENSG00000175104) #22 PRR5L (ENSG00000135362) #23 COMMD9 (ENSG00000110442) #24 LDLRAD3 (ENSG00000179241) #25 TRIM44 (ENSG00000166326) #26 FJX1 (ENSG00000179431) #28 PAMR1 (ENSG00000149090) #29 SLC1A2 (ENSG00000110436) #30 CD44 (ENSG00000026508) #31 PDHX (ENSG00000110435) #32 APIP (ENSG00000149089) #33 EHF (ENSG00000135373) #34 ELF5 (ENSG00000135374) #35 CAT (ENSG00000121691) #36 ABTB2 (ENSG00000166016) NAT10 (ENSG00000135372) Gorilla MODERN SPECIES 2 ACCS (ENSGGOG00000003124) ACCSL (ENSGGOG00000004173) ENSGGOG00000001934 ENSGGOG00000007196 ALKBH3 (ENSGGOG00000001931) ENSGGOG00000024238 HSD17B12 (ENSGGOG00000002003) ENSGGOG00000022574 TTC17 (ENSGGOG00000008811) API5 (ENSGGOG00000002358) LRRC4C (ENSGGOG00000006776) ENSGGOG00000024548 IFTAP (ENSGGOG00000004773) #20 RAG2 (ENSGGOG00000027505) #21 RAG1 (ENSGGOG00000041736) TRAF6 (ENSGGOG00000005854) #22 PRR5L (ENSGGOG00000008909) #23 COMMD9 (ENSGGOG00000012472) #24 LDLRAD3 (ENSGGOG00000016627) #25 ENSGGOG00000024203 ENSGGOG00000037454 TRIM44 (ENSGGOG00000004970) #26 FJX1 (ENSGGOG00000026577) #28 PAMR1 (ENSGGOG00000014257) #29 SLC1A2 (ENSGGOG00000041651) #30 ENSGGOG00000043068 CD44 (ENSGGOG00000000851) #31 PDHX (ENSGGOG00000001206) #32 APIP (ENSGGOG00000022940) #33 EHF (ENSGGOG00000006149) #34 ELF5 (ENSGGOG00000006882) #35 Orangutan MODERN SPECIES 2 TSPAN18 (ENSPPYG00000003335) CD82 (ENSPPYG00000003336) ALX4 (ENSPPYG00000003337) EXT2 (ENSPPYG00000003338) ACCS (ENSPPYG00000003339) ACCSL (ENSPPYG00000003340) ENSPPYG00000003341 ALKBH3 (ENSPPYG00000003342) HSD17B12 (ENSPPYG00000003343) TTC17 (ENSPPYG00000003344) API5 (ENSPPYG00000003345) LRRC4C (ENSPPYG00000003346) IFTAP (ENSPPYG00000003347) #20 RAG2 (ENSPPYG00000003348) #21 RAG1 (ENSPPYG00000034216) TRAF6 (ENSPPYG00000003350) #22 PRR5L (ENSPPYG00000003351) #23 COMMD9 (ENSPPYG00000003352) #24 LDLRAD3 (ENSPPYG00000003354) #25 TRIM44 (ENSPPYG00000003355) #26 FJX1 (ENSPPYG00000038455) #28 PAMR1 (ENSPPYG00000003356) #29 SLC1A2 (ENSPPYG00000003357) #30 CD44 (ENSPPYG00000032340) #31 PDHX (ENSPPYG00000003360) #32 APIP (ENSPPYG00000003361) #33 ENSPPYG00000034760 EHF (ENSPPYG00000003362) #34 ELF5 (ENSPPYG00000003363) #35 CAT (ENSPPYG00000003364) #36 ABTB2 (ENSPPYG00000003365) Gibbon MODERN SPECIES 5 CD82 (ENSNLEG00000017971) EXT2 (ENSNLEG00000017968) ACCS (ENSNLEG00000017967) ACCSL (ENSNLEG00000017966) ENSNLEG00000017965 ENSNLEG00000030198 ALKBH3 (ENSNLEG00000027521) ENSNLEG00000033255 HSD17B12 (ENSNLEG00000035088) TTC17 (ENSNLEG00000017958) API5 (ENSNLEG00000017956) LRRC4C (ENSNLEG00000017955) IFTAP (ENSNLEG00000017953) #20 RAG2 (ENSNLEG00000017952) #21 RAG1 (ENSNLEG00000017951) TRAF6 (ENSNLEG00000017949) #22 PRR5L (ENSNLEG00000017945) #23 COMMD9 (ENSNLEG00000017943) #24 LDLRAD3 (ENSNLEG00000017940) #25 ENSNLEG00000033071 ENSNLEG00000034033 TRIM44 (ENSNLEG00000017939) #26 FJX1 (ENSNLEG00000018184) #28 PAMR1 (ENSNLEG00000017937) #29 SLC1A2 (ENSNLEG00000032279) #30 ENSNLEG00000031295 CD44 (ENSNLEG00000017932) #31 PDHX (ENSNLEG00000017930) #32 APIP (ENSNLEG00000028265) #33 EHF (ENSNLEG00000017927) #34 ELF5 (ENSNLEG00000017925) #35 Cercopithecidae ANCESTRAL SPECIES ENSGT00940000161101 ENSGT00940000162841 ENSGT00390000016821 ENSGT00940000157226 ENSGT00950000183070.a.b.g.b.b.a.b ENSGT00940000154860.q ENSGT00940000154430.e.b ENSGT00520000059086 ENSGT00390000006196 ENSGT00950000183087.A.b.a ENSGT00390000010991.e ENSGT00940000157405 ENSGT00390000013149 #20 ENSGT00390000012559 #21 ENSGT00390000008679 ENSGT00940000155426.s #22 ENSGT00530000063981.b #23 ENSGT00390000006218 #24 ENSGT00940000160574 #25 ENSGT00440000034605 #26 ENSGT00390000016768 #28 ENSGT00940000154234.a #29 ENSGT00940000155379 #30 ENSGT00910000147087 ENSGT00530000063822.a.a #31 ENSGT00940000156046 #32 ENSGT00390000001680 #33 ENSGT00940000159310 #34 ENSGT00940000160980 #35 ENSGT00390000018100 #36 ENSGT00940000157661 Cercopithecinae ANCESTRAL SPECIES 3 ENSGT00940000156620 ENSGT00940000161101 ENSGT00940000162841 ENSGT00390000016821 ENSGT00940000157226 ENSGT00950000183070.a.b.g.b.b.a.b ENSGT00940000154860.q ENSGT00940000154430.e.b ENSGT00520000059086 ENSGT00390000006196 ENSGT00390000010991.e ENSGT00940000157405 ENSGT00390000013149 #20 ENSGT00390000012559 #21 ENSGT00390000008679 ENSGT00940000155426.s #22 ENSGT00530000063981.b #23 ENSGT00390000006218 #24 ENSGT00940000160574 #25 ENSGT00440000034605 #26 ENSGT00390000016768 #28 ENSGT00940000154234.a #29 ENSGT00940000155379 #30 ENSGT00910000147087 ENSGT00530000063822.a.a #31 ENSGT00940000156046 #32 ENSGT00390000001680 #33 ENSGT00940000159310 #34 ENSGT00940000160980 #35 ENSGT00390000018100 #36 ENSGT00940000157661 Cercopithecinae_a ANCESTRAL SPECIES 2 ENSGT00940000156620 ENSGT00940000161101 ENSGT00940000162841 ENSGT00390000016821 ENSGT00940000157226 ENSGT00950000183070.a.b.g.b.b.a.b ENSGT00940000154860.q ENSGT00390000006196 ENSGT00390000010991.e ENSGT00910000147254 ENSGT00940000157405 ENSGT00390000009130.a.a.a.b ENSGT00390000013149 #20 ENSGT00390000012559 #21 ENSGT00390000008679 ENSGT00940000155426.s #22 ENSGT00530000063981.b #23 ENSGT00390000006218 #24 ENSGT00940000160574 #25 ENSGT00910000147182 ENSGT00440000034605 #26 ENSGT00390000016768 #28 ENSGT00940000154234.a #29 ENSGT00940000155379 #30 ENSGT00910000147087 ENSGT00530000063822.a.a #31 ENSGT00940000156046 #32 ENSGT00390000001680 #33 ENSGT00940000159310 #34 ENSGT00940000160980 #35 ENSGT00390000018100 #36 Cercopithecinae_b ANCESTRAL SPECIES 27 ENSGT00940000156620 ENSGT00940000161101 ENSGT00940000162841 ENSGT00390000016821 ENSGT00940000157226 ENSGT00950000183070.a.b.g.b.b.a.b ENSGT00940000154860.q ENSGT00390000006196 ENSGT00390000010991.e ENSGT00910000147254 ENSGT00940000157405 ENSGT00390000009130.a.a.a.b ENSGT00390000013149 #20 ENSGT00390000012559 #21 ENSGT00390000008679 ENSGT00940000155426.s #22 ENSGT00530000063981.b #23 ENSGT00390000006218 #24 ENSGT00940000160574 #25 ENSGT00910000147182 ENSGT00440000034605 #26 ENSGT00390000016768 #28 ENSGT00940000154234.a #29 ENSGT00940000155379 #30 ENSGT00910000147087 ENSGT00530000063822.a.a #31 ENSGT00940000156046 #32 ENSGT00390000001680 #33 ENSGT00940000159310 #34 ENSGT00940000160980 #35 ENSGT00390000018100 #36 Olive baboon MODERN SPECIES 3 NDUFS3 (ENSPANG00000001634) FAM180B (ENSPANG00000000112) ENSPANG00000000111 MTCH2 (ENSPANG00000001893) AGBL2 (ENSPANG00000005171) FNBP4 (ENSPANG00000006036) NUP160 (ENSPANG00000023008) PTPRJ (ENSPANG00000019135) OR4B1 (ENSPANG00000047367) OR4X2 (ENSPANG00000002781) LRRC4C (ENSPANG00000011879) ENSPANG00000049659 IFTAP (ENSPANG00000016654) #20 RAG2 (ENSPANG00000010008) #21 RAG1 (ENSPANG00000006541) TRAF6 (ENSPANG00000004746) #22 PRR5L (ENSPANG00000006440) #23 COMMD9 (ENSPANG00000025616) #24 LDLRAD3 (ENSPANG00000019179) #25 ENSPANG00000040429 TRIM44 (ENSPANG00000005449) #26 FJX1 (ENSPANG00000006035) #28 PAMR1 (ENSPANG00000001890) #29 SLC1A2 (ENSPANG00000004847) #30 CD44 (ENSPANG00000023332) #31 ENSPANG00000042989 PDHX (ENSPANG00000008468) #32 APIP (ENSPANG00000020888) #33 EHF (ENSPANG00000024423) #34 ELF5 (ENSPANG00000023357) #35 CAT (ENSPANG00000007496) #36 Cercopithecinae_d ANCESTRAL SPECIES 61 ENSGT00940000156620 ENSGT00940000161101 ENSGT00940000162841 ENSGT00390000016821 ENSGT00940000157226 ENSGT00950000183070.a.b.g.b.b.a.b ENSGT00940000154860.q ENSGT00390000006196 ENSGT00390000010991.e ENSGT00910000147254 ENSGT00940000157405 ENSGT00390000009130.a.a.a.b ENSGT00390000013149 #20 ENSGT00390000012559 #21 ENSGT00390000008679 ENSGT00940000155426.s #22 ENSGT00530000063981.b #23 ENSGT00390000006218 #24 ENSGT00940000160574 #25 ENSGT00910000147182 ENSGT00440000034605 #26 ENSGT00390000016768 #28 ENSGT00940000154234.a #29 ENSGT00940000155379 #30 ENSGT00910000147087 ENSGT00530000063822.a.a #31 ENSGT00940000156046 #32 ENSGT00390000001680 #33 ENSGT00940000159310 #34 ENSGT00940000160980 #35 ENSGT00390000018100 #36 Drill MODERN SPECIES 405 LRRC4C (ENSMLEG00000022677) ENSMLEG00000028981 IFTAP (ENSMLEG00000034722) #20 RAG2 (ENSMLEG00000028090) #21 RAG1 (ENSMLEG00000008104) TRAF6 (ENSMLEG00000009991) #22 PRR5L (ENSMLEG00000040720) #23 COMMD9 (ENSMLEG00000033200) #24 LDLRAD3 (ENSMLEG00000030802) #25 Sooty mangabey MODERN SPECIES 660 ENSCATG00000038560 ALKBH3 (ENSCATG00000035646) ENSCATG00000029253 HSD17B12 (ENSCATG00000039158) ENSCATG00000018523 ENSCATG00000009013 TTC17 (ENSCATG00000032553) API5 (ENSCATG00000030276) ENSCATG00000036798 ENSCATG00000037205 LRRC4C (ENSCATG00000021681) ENSCATG00000007177 IFTAP (ENSCATG00000030440) #20 RAG2 (ENSCATG00000018432) #21 RAG1 (ENSCATG00000033061) TRAF6 (ENSCATG00000030633) #22 PRR5L (ENSCATG00000036147) #23 COMMD9 (ENSCATG00000032393) #24 LDLRAD3 (ENSCATG00000035471) #25 ENSCATG00000029956 TRIM44 (ENSCATG00000041732) #26 FJX1 (ENSCATG00000019714) #28 PAMR1 (ENSCATG00000037871) #29 SLC1A2 (ENSCATG00000042113) #30 ENSCATG00000032365 CD44 (ENSCATG00000038723) #31 PDHX (ENSCATG00000031099) #32 APIP (ENSCATG00000032616) #33 EHF (ENSCATG00000035479) #34 ELF5 (ENSCATG00000039615) #35 CAT (ENSCATG00000034200) #36 Macaca ANCESTRAL SPECIES 2 ENSGT00940000156620 ENSGT00940000161101 ENSGT00940000162841 ENSGT00390000016821 ENSGT00940000157226 ENSGT00950000183070.a.b.g.b.b.a.b ENSGT00940000154860.q ENSGT00390000006196 ENSGT00390000010991.e ENSGT00910000147254 ENSGT00940000157405 ENSGT00390000009130.a.a.a.b ENSGT00390000013149 #20 ENSGT00390000012559 #21 ENSGT00390000008679 ENSGT00940000155426.s #22 ENSGT00530000063981.b #23 ENSGT00390000006218 #24 ENSGT00940000160574 #25 ENSGT00910000147182 ENSGT00440000034605 #26 ENSGT00390000016768 #28 ENSGT00940000154234.a #29 ENSGT00940000155379 #30 ENSGT00910000147087 ENSGT00530000063822.a.a #31 ENSGT00940000156046 #32 ENSGT00390000001680 #33 ENSGT00940000159310 #34 ENSGT00940000160980 #35 ENSGT00390000018100 #36 Pig-tailed macaque MODERN SPECIES 485 ACCSL (ENSMNEG00000028079) C11orf96 (ENSMNEG00000026217) ALKBH3 (ENSMNEG00000042403) ENSMNEG00000041918 HSD17B12 (ENSMNEG00000013166) TTC17 (ENSMNEG00000045201) API5 (ENSMNEG00000030042) ENSMNEG00000031138 ENSMNEG00000013022 ENSMNEG00000008856 LRRC4C (ENSMNEG00000017892) ENSMNEG00000032979 IFTAP (ENSMNEG00000044678) #20 RAG2 (ENSMNEG00000022173) #21 RAG1 (ENSMNEG00000007591) TRAF6 (ENSMNEG00000042176) #22 PRR5L (ENSMNEG00000043138) #23 COMMD9 (ENSMNEG00000030213) #24 LDLRAD3 (ENSMNEG00000037863) #25 ENSMNEG00000045218 TRIM44 (ENSMNEG00000039165) #26 FJX1 (ENSMNEG00000021210) #28 PAMR1 (ENSMNEG00000038968) #29 SLC1A2 (ENSMNEG00000033227) #30 ENSMNEG00000027059 CD44 (ENSMNEG00000024975) #31 PDHX (ENSMNEG00000041540) #32 APIP (ENSMNEG00000037577) #33 EHF (ENSMNEG00000035998) #34 ELF5 (ENSMNEG00000036605) #35 CAT (ENSMNEG00000043629) #36 Macaca_a ANCESTRAL SPECIES 3 ENSGT00940000156620 ENSGT00940000162841 ENSGT01100000263577.a.a.b.a.b.a.a.b.b.a.a ENSGT00390000016821 ENSGT00940000157226 ENSGT00940000154860.q ENSGT00950000183070.a.b.g.b.b.a.b ENSGT00940000164709.a.b.b.a.a.b.b.b.b.a.b.b.c.a.a.a.a ENSGT00390000006196 ENSGT00390000010991.e ENSGT00910000147254 ENSGT00940000157405 ENSGT00390000013149 #20 ENSGT00390000012559 #21 ENSGT00390000008679 ENSGT00940000155426.s #22 ENSGT00530000063981.b #23 ENSGT00390000006218 #24 ENSGT00940000160574 #25 ENSGT01030000240096 ENSGT00440000034605 #26 ENSGT00390000016768 #28 ENSGT00940000154234.a #29 ENSGT00940000155379 #30 ENSGT00530000063822.a.a #31 ENSGT00940000156046 #32 ENSGT00390000001680 #33 ENSGT00940000159310 #34 ENSGT00940000160980 #35 ENSGT00390000018100 #36 ENSGT00940000157661 Crab-eating macaque MODERN SPECIES 5 API5 (ENSMFAG00000037679) ENSMFAG00000045706 ENSMFAG00000063638 ENSMFAG00000052309 ENSMFAG00000059926 ENSMFAG00000052848 ENSMFAG00000065238 ENSMFAG00000050969 ENSMFAG00000063906 LRRC4C (ENSMFAG00000030573) ENSMFAG00000038539 ENSMFAG00000051896 IFTAP (ENSMFAG00000001278) #20 RAG2 (ENSMFAG00000029426) #21 RAG1 (ENSMFAG00000011988) TRAF6 (ENSMFAG00000040017) #22 PRR5L (ENSMFAG00000059336) #23 COMMD9 (ENSMFAG00000060407) #24 LDLRAD3 (ENSMFAG00000043269) #25 ENSMFAG00000065530 TRIM44 (ENSMFAG00000045833) #26 PAMR1 (ENSMFAG00000042856) #29 SLC1A2 (ENSMFAG00000043293) #30 CD44 (ENSMFAG00000043892) #31 PDHX (ENSMFAG00000042807) #32 APIP (ENSMFAG00000031416) #33 EHF (ENSMFAG00000029447) #34 ELF5 (ENSMFAG00000046400) #35 ENSMFAG00000065345 CAT (ENSMFAG00000000437) #36 ENSMFAG00000001208 Rhesus MODERN SPECIES 5 ACCSL (ENSMMUG00000019693) ENSMMUG00000059789 C14H11orf96 (ENSMMUG00000018464) ALKBH3 (ENSMMUG00000017294) ENSMMUG00000056754 HSD17B12 (ENSMMUG00000018465) ENSMMUG00000048799 TTC17 (ENSMMUG00000000844) API5 (ENSMMUG00000008827) ENSMMUG00000049945 ENSMMUG00000049895 LRRC4C (ENSMMUG00000007945) IFTAP (ENSMMUG00000018269) #20 RAG2 (ENSMMUG00000018268) #21 RAG1 (ENSMMUG00000049488) TRAF6 (ENSMMUG00000018266) #22 PRR5L (ENSMMUG00000018265) #23 COMMD9 (ENSMMUG00000007095) #24 LDLRAD3 (ENSMMUG00000007093) #25 ENSMMUG00000051870 TRIM44 (ENSMMUG00000004332) #26 FJX1 (ENSMMUG00000004331) #28 PAMR1 (ENSMMUG00000004330) #29 SLC1A2 (ENSMMUG00000004329) #30 CD44 (ENSMMUG00000004327) #31 PDHX (ENSMMUG00000006448) #32 APIP (ENSMMUG00000006447) #33 ENSMMUG00000057784 EHF (ENSMMUG00000005927) #34 ELF5 (ENSMMUG00000002432) #35 CAT (ENSMMUG00000002429) #36 Vervet Monkey MODERN SPECIES ALX4 (ENSCSAG00000005569) EXT2 (ENSCSAG00000005563) ACCS (ENSCSAG00000005552) ACCSL (ENSCSAG00000005546) ENSCSAG00000005541 ALKBH3 (ENSCSAG00000005539) HSD17B12 (ENSCSAG00000005534) ENSCSAG00000005530 TTC17 (ENSCSAG00000005526) API5 (ENSCSAG00000005506) LRRC4C (ENSCSAG00000019212) ENSCSAG00000005494 IFTAP (ENSCSAG00000005492) #20 RAG2 (ENSCSAG00000019213) #21 RAG1 (ENSCSAG00000005489) TRAF6 (ENSCSAG00000005486) #22 PRR5L (ENSCSAG00000005478) #23 COMMD9 (ENSCSAG00000005477) #24 ENSCSAG00000019214 LDLRAD3 (ENSCSAG00000005472) #25 TRIM44 (ENSCSAG00000005470) #26 FJX1 (ENSCSAG00000019315) #28 PAMR1 (ENSCSAG00000005463) #29 SLC1A2 (ENSCSAG00000005437) #30 CD44 (ENSCSAG00000005433) #31 PDHX (ENSCSAG00000005431) #32 APIP (ENSCSAG00000005426) #33 EHF (ENSCSAG00000005424) #34 ELF5 (ENSCSAG00000005423) #35 CAT (ENSCSAG00000005418) #36 ABTB2 (ENSCSAG00000005406) Rhinopithecus ANCESTRAL SPECIES 111 ENSGT00390000009130.a.a.a.a.a.b ENSGT00390000013149 #20 ENSGT00390000012559 #21 ENSGT00390000008679 ENSGT00940000155426.s #22 ENSGT00530000063981.b #23 ENSGT00390000006218 #24 ENSGT00940000160574 #25 ENSGT00440000034605 #26 ENSGT00940000154234.a #29 ENSGT00940000155379 #30 ENSGT00530000063822.a.a #31 ENSGT00940000156046 #32 ENSGT00390000001680 #33 ENSGT00940000159310 #34 ENSGT00940000160980 #35 ENSGT00390000018100 #36 ENSGT00940000157661 ENSGT00390000009140 ENSGT00940000153438.a Black snub-nosed monkey MODERN SPECIES 689 ENSRBIG00000031226 IFTAP (ENSRBIG00000029619) #20 RAG2 (ENSRBIG00000019794) #21 RAG1 (ENSRBIG00000024824) TRAF6 (ENSRBIG00000041733) #22 PRR5L (ENSRBIG00000029007) #23 COMMD9 (ENSRBIG00000038328) #24 LDLRAD3 (ENSRBIG00000028770) #25 Golden snub-nosed monkey MODERN SPECIES 3270 ENSRROG00000017023 ENSRROG00000007760 IFTAP (ENSRROG00000029267) #20 RAG2 (ENSRROG00000003972) #21 RAG1 (ENSRROG00000026777) TRAF6 (ENSRROG00000042849) #22 PRR5L (ENSRROG00000042840) #23 COMMD9 (ENSRROG00000036538) #24 LDLRAD3 (ENSRROG00000032454) #25 ENSRROG00000035939 TRIM44 (ENSRROG00000039062) #26 PAMR1 (ENSRROG00000028590) #29 SLC1A2 (ENSRROG00000030103) #30 CD44 (ENSRROG00000040965) #31 PDHX (ENSRROG00000045075) #32 APIP (ENSRROG00000044872) #33 EHF (ENSRROG00000038817) #34 ELF5 (ENSRROG00000031978) #35 CAT (ENSRROG00000002648) #36 ABTB2 (ENSRROG00000035702) NAT10 (ENSRROG00000011811) Catarrhini ANCESTRAL SPECIES 18 ENSGT00530000063713.a ENSGT00940000157470 ENSGT00940000161078 ENSGT00390000004181 ENSGT00390000014794.b ENSGT00940000159995 ENSGT00940000153335.a.b ENSGT00940000154939 ENSGT00530000066649 ENSGT00390000013594 ENSGT01030000235256 ENSGT00940000156416 ENSGT00390000004279.o.b ENSGT00950000183033.a.a.d ENSGT00390000014563.a.b ENSGT00940000155426.t #22 ENSGT00940000156276 ENSGT00440000039001 ENSGT00940000155109.b ENSGT00940000154445.e.a ENSGT00940000155309.f ENSGT00390000017639 ENSGT00940000156675 ENSGT00940000154368.l ENSGT00530000063516.a.a.d ENSGT00940000161319 ENSGT00940000154704.d ENSGT00940000161661 ENSGT00940000158678 ENSGT00390000015792 ENSGT00390000004867 Hominoidea ANCESTRAL SPECIES 11 ENSGT00530000063713.a ENSGT00940000157470 ENSGT00940000161078 ENSGT00390000004181 ENSGT00390000014794.b ENSGT00940000159995 ENSGT00940000153335.a.b ENSGT00940000154939 ENSGT00530000066649 ENSGT00390000013594 ENSGT01030000235256 ENSGT00940000156416 ENSGT00390000004279.o.b ENSGT00950000183033.a.a.d ENSGT00390000014563.a.b ENSGT00940000155426.t #22 ENSGT00940000156276 ENSGT00440000039001 ENSGT00940000155109.b ENSGT00940000154445.e.a ENSGT00940000155309.f ENSGT00390000017639 ENSGT00940000156675 ENSGT00940000154368.l ENSGT00530000063516.a.a.c.b.z ENSGT00940000161319 ENSGT00940000154704.d ENSGT00940000161661 ENSGT00940000158678 ENSGT00390000015792 ENSGT00390000004867 Hominidae ANCESTRAL SPECIES 13 ENSGT00530000063713.a ENSGT00940000157470 ENSGT00940000161078 ENSGT00390000004181 ENSGT00390000014794.b ENSGT00940000159995 ENSGT00940000153335.a.b ENSGT00940000154939 ENSGT00530000066649 ENSGT00390000013594 ENSGT01030000235256 ENSGT00940000156416 ENSGT00390000004279.o.b ENSGT00950000183033.a.a.d ENSGT00390000014563.a.b ENSGT00940000155426.t #22 ENSGT00940000156276 ENSGT00440000039001 ENSGT00940000155109.b ENSGT00940000154445.e.a ENSGT00940000155309.f ENSGT00390000017639 ENSGT01090000261235 ENSGT00940000156675 ENSGT00940000154368.l ENSGT00530000063516.a.a.c.b.z ENSGT00940000161319 ENSGT00940000154704.d ENSGT00940000161661 ENSGT00940000158678 ENSGT00390000015792 Homo/Pan/Gorilla group ANCESTRAL SPECIES 17 ENSGT00530000063713.a ENSGT00940000157470 ENSGT00940000161078 ENSGT00390000004181 ENSGT00390000014794.b ENSGT00940000159995 ENSGT00940000153335.a.b ENSGT00940000154939 ENSGT00530000066649 ENSGT00390000013594 ENSGT01030000235256 ENSGT00940000156416 ENSGT00390000004279.o.b ENSGT00950000183033.a.a.d ENSGT00390000014563.a.b ENSGT00940000155426.t #22 ENSGT00940000156276 ENSGT00440000039001 ENSGT00940000155109.b ENSGT00940000154445.e.a ENSGT00940000155309.f ENSGT00390000017639 ENSGT01090000261235.b ENSGT00940000156675 ENSGT00940000154368.l ENSGT00530000063516.a.a.c.b.z ENSGT00940000161319 ENSGT00940000154704.d ENSGT00940000161661 ENSGT00940000158678 ENSGT00390000015792 Homo/Pan group ANCESTRAL SPECIES 18 ENSGT00530000063713.a ENSGT00940000157470 ENSGT00940000161078 ENSGT00390000004181 ENSGT00390000014794.b ENSGT00940000159995 ENSGT00940000153335.a.b ENSGT00940000154939 ENSGT00530000066649 ENSGT00390000013594 ENSGT01030000235256 ENSGT00940000156416 ENSGT00390000004279.o.b ENSGT00950000183033.a.a.d ENSGT00390000014563.a.b ENSGT00940000155426.t #22 ENSGT00940000156276 ENSGT00440000039001 ENSGT00940000155109.b ENSGT00940000154445.e.a ENSGT00940000155309.f ENSGT00390000017639 ENSGT01090000261235.b ENSGT00940000156675 ENSGT00940000154368.l ENSGT00530000063516.a.a.c.b.z ENSGT00940000161319 ENSGT00940000154704.d ENSGT00940000161661 ENSGT00940000158678 ENSGT00390000015792 Pan ANCESTRAL SPECIES 16 ENSGT00530000063713.a ENSGT00940000157470 ENSGT00940000161078 ENSGT00390000004181 ENSGT00390000014794.b ENSGT00940000159995 ENSGT00940000153335.a.b ENSGT00940000154939 ENSGT00530000066649 ENSGT00390000013594 ENSGT01030000235256 ENSGT00940000156416 ENSGT00390000004279.o.b ENSGT00950000183033.a.a.d ENSGT00390000014563.a.b ENSGT00940000155426.t #22 ENSGT00940000156276 ENSGT00440000039001 ENSGT00940000155109.b ENSGT00940000154445.e.a ENSGT00940000155309.f ENSGT00390000017639 ENSGT01090000261235.b ENSGT00940000156675 ENSGT00940000154368.l ENSGT00530000063516.a.a.c.b.z ENSGT00940000161319 ENSGT00940000154704.d ENSGT00940000161661 ENSGT00940000158678 ENSGT00550000076459 Chimpanzee MODERN SPECIES 1 RTKN2 (ENSPTRG00000002536) ARID5B (ENSPTRG00000002534) CABCOCO1 (ENSPTRG00000002532) TMEM26 (ENSPTRG00000002530) RHOBTB1 (ENSPTRG00000002529) CDK1 (ENSPTRG00000002528) ENSPTRG00000052279 ANK3 (ENSPTRG00000002526) ENSPTRG00000041608 CCDC6 (ENSPTRG00000002524) MRLN (ENSPTRG00000045653) SLC16A9 (ENSPTRG00000002523) ENSPTRG00000043662 FAM13C (ENSPTRG00000002522) PHYHIPL (ENSPTRG00000002521) ENSPTRG00000048024 #22 BICC1 (ENSPTRG00000002520) TFAM (ENSPTRG00000048475) UBE2D1 (ENSPTRG00000002518) CISD1 (ENSPTRG00000002517) IPMK (ENSPTRG00000002516) ZWINT (ENSPTRG00000002515) MTRNR2L5 (ENSPTRG00000047669) PCDH15 (ENSPTRG00000048830) MBL2 (ENSPTRG00000044979) ENSPTRG00000044550 ENSPTRG00000049782 DKK1 (ENSPTRG00000002511) ENSPTRG00000043097 PRKG1 (ENSPTRG00000002509) A1CF (ENSPTRG00000002508) Bonobo MODERN SPECIES 1 ZNF365 (ENSPPAG00000034684) RTKN2 (ENSPPAG00000032579) ARID5B (ENSPPAG00000038387) ENSPPAG00000043572 TMEM26 (ENSPPAG00000042231) RHOBTB1 (ENSPPAG00000043669) CDK1 (ENSPPAG00000040220) ENSPPAG00000040138 ANK3 (ENSPPAG00000039668) ENSPPAG00000043611 CCDC6 (ENSPPAG00000042978) SLC16A9 (ENSPPAG00000030270) ENSPPAG00000035776 FAM13C (ENSPPAG00000024865) PHYHIPL (ENSPPAG00000039349) ENSPPAG00000020860 #22 BICC1 (ENSPPAG00000035110) TFAM (ENSPPAG00000030193) UBE2D1 (ENSPPAG00000036898) CISD1 (ENSPPAG00000042695) IPMK (ENSPPAG00000027187) ZWINT (ENSPPAG00000038915) ENSPPAG00000029642 MBL2 (ENSPPAG00000041167) ENSPPAG00000041173 ENSPPAG00000038204 DKK1 (ENSPPAG00000034431) ENSPPAG00000032242 PRKG1 (ENSPPAG00000033876) ENSPPAG00000043487 A1CF (ENSPPAG00000028115) Gorilla MODERN SPECIES 1 ADO (ENSGGOG00000005286) ENSGGOG00000041727 ZNF365 (ENSGGOG00000013216) RTKN2 (ENSGGOG00000016938) ARID5B (ENSGGOG00000004127) ENSGGOG00000011328 TMEM26 (ENSGGOG00000003595) CDK1 (ENSGGOG00000013311) ENSGGOG00000006954 ANK3 (ENSGGOG00000003939) CCDC6 (ENSGGOG00000013697) MRLN (ENSGGOG00000042386) SLC16A9 (ENSGGOG00000004136) FAM13C (ENSGGOG00000008904) PHYHIPL (ENSGGOG00000008898) ENSGGOG00000023215 #22 BICC1 (ENSGGOG00000005484) ENSGGOG00000036830 TFAM (ENSGGOG00000037416) UBE2D1 (ENSGGOG00000004811) CISD1 (ENSGGOG00000022769) IPMK (ENSGGOG00000008790) ENSGGOG00000027305 ZWINT (ENSGGOG00000007258) ENSGGOG00000039537 MBL2 (ENSGGOG00000039764) ENSGGOG00000037070 DKK1 (ENSGGOG00000002557) PRKG1 (ENSGGOG00000041471) ENSGGOG00000042388 ENSGGOG00000036416 Gibbon MODERN SPECIES 8 ENSNLEG00000030111 ZNF365 (ENSNLEG00000012085) RTKN2 (ENSNLEG00000012090) ARID5B (ENSNLEG00000012110) ENSNLEG00000012116 TMEM26 (ENSNLEG00000029233) RHOBTB1 (ENSNLEG00000012126) CDK1 (ENSNLEG00000012138) ENSNLEG00000012149 ANK3 (ENSNLEG00000012150) CCDC6 (ENSNLEG00000027854) SLC16A9 (ENSNLEG00000012249) ENSNLEG00000032422 FAM13C (ENSNLEG00000012255) PHYHIPL (ENSNLEG00000012280) ENSNLEG00000027716 #22 BICC1 (ENSNLEG00000012284) TFAM (ENSNLEG00000012295) UBE2D1 (ENSNLEG00000012306) CISD1 (ENSNLEG00000036174) IPMK (ENSNLEG00000012319) IRAK1BP1 (ENSNLEG00000029737) PHIP (ENSNLEG00000012332) ENSNLEG00000035361 HMGN3 (ENSNLEG00000028556) LCA5 (ENSNLEG00000012386) SH3BGRL2 (ENSNLEG00000036162) ELOVL4 (ENSNLEG00000012396) ENSNLEG00000028070 TTK (ENSNLEG00000012403) BCKDHB (ENSNLEG00000012437) Cercopithecidae ANCESTRAL SPECIES 15 ENSGT00510000055172 ENSGT00530000063713.a ENSGT00940000157470 ENSGT00940000161078 ENSGT00390000004181 ENSGT00390000014794.b ENSGT00940000159995 ENSGT00940000153335.a.b ENSGT00940000154939 ENSGT00390000013594 ENSGT01030000235256 ENSGT00940000156416 ENSGT00940000154185.l.a.b ENSGT00950000183033.a.a.d ENSGT00390000014563.a.b ENSGT00940000155426.t #22 ENSGT00940000156276 ENSGT00440000039001 ENSGT00940000155109.b ENSGT00940000154445.e.a ENSGT00940000155309.f ENSGT00390000017639 ENSGT00940000156675 ENSGT00940000154368.l ENSGT00530000063516.a.a.d ENSGT00940000161319 ENSGT00940000154704.d ENSGT00940000161661 ENSGT00940000158678 ENSGT00390000015792 ENSGT00390000004867 Rhinopithecus ANCESTRAL SPECIES 457 ENSGT00390000013594 ENSGT00390000008610.a.b.a.a.a.t ENSGT01030000235256 ENSGT00940000156416 ENSGT00940000154185.l.a.b.c ENSGT00950000183033.a.a.d ENSGT00390000014563.a.b ENSGT00940000155426.t #22 ENSGT00940000156276 ENSGT00440000039001.o ENSGT00940000155109.b Golden snub-nosed monkey MODERN SPECIES 638 FAM13C (ENSRROG00000045311) PHYHIPL (ENSRROG00000040980) ENSRROG00000017319 #22 BICC1 (ENSRROG00000017888) Black snub-nosed monkey MODERN SPECIES 993 CCDC6 (ENSRBIG00000031215) ENSRBIG00000042266 MRLN (ENSRBIG00000021847) SLC16A9 (ENSRBIG00000011143) ENSRBIG00000039366 FAM13C (ENSRBIG00000026746) PHYHIPL (ENSRBIG00000030887) ENSRBIG00000027258 #22 BICC1 (ENSRBIG00000030483) TFAM (ENSRBIG00000031869) UBE2D1 (ENSRBIG00000031898) ENSRBIG00000042763 IPMK (ENSRBIG00000025799) Cercopithecinae ANCESTRAL SPECIES 15 ENSGT00510000055172 ENSGT00530000063713.a ENSGT00940000157470 ENSGT00940000161078 ENSGT00390000004181 ENSGT00390000014794.b ENSGT00940000159995 ENSGT00940000153335.a.b.y.a ENSGT00940000154939 ENSGT00390000013594 ENSGT01030000235256 ENSGT00940000156416 ENSGT00940000154185.l.a.b ENSGT00950000183033.a.a.d ENSGT00390000014563.a.b ENSGT00940000155426.t #22 ENSGT00940000156276 ENSGT00440000039001 ENSGT00940000155109.b ENSGT00940000154445.e.a ENSGT00940000155309.f ENSGT00390000017639 ENSGT00940000156675 ENSGT00940000154368.l ENSGT00530000063516.a.a.d ENSGT00940000161319 ENSGT00940000154704.d ENSGT00940000161661 ENSGT00940000158678 ENSGT00390000015792 ENSGT00390000004867 Cercopithecinae_a ANCESTRAL SPECIES 14 ENSGT00530000063713.a ENSGT00940000157470 ENSGT00940000161078 ENSGT00390000004181 ENSGT00390000014794.b ENSGT00940000159995 ENSGT00940000153335.a.b.y.a ENSGT00940000154939 ENSGT00950000182926.b.d.c.a.h.l.a ENSGT00390000013594 ENSGT01030000235256 ENSGT00940000156416 ENSGT00940000154185.l.a.b ENSGT00950000183033.a.a.d ENSGT00390000014563.a.b ENSGT00940000155426.t #22 ENSGT00940000156276 ENSGT00440000039001 ENSGT00940000155109.b ENSGT00940000154445.e.a ENSGT00940000155309.f ENSGT00390000017639 ENSGT00940000156675 ENSGT00940000154368.l ENSGT00910000147615 ENSGT00940000161319 ENSGT00940000154704.d ENSGT00940000161661 ENSGT00940000158678 ENSGT00390000015792 ENSGT00390000004867 Macaca ANCESTRAL SPECIES 11 ENSGT00530000063713.a ENSGT00940000157470 ENSGT00940000161078 ENSGT00390000004181 ENSGT00390000014794.b ENSGT00940000159995 ENSGT00940000153335.a.b.y.a ENSGT00940000154939 ENSGT00950000182926.b.d.c.a.h.l.a ENSGT00390000013594 ENSGT01030000235256 ENSGT00940000156416 ENSGT00940000154185.l.a.b ENSGT00950000183033.a.a.d ENSGT00390000014563.a.b ENSGT00940000155426.t #22 ENSGT00940000156276 ENSGT00440000039001 ENSGT00940000155109.b ENSGT00940000154445.e.a ENSGT00940000155309.f ENSGT00390000017639 ENSGT00940000156675 ENSGT00940000154368.l ENSGT00910000147615 ENSGT00940000161319 ENSGT00940000154704.d ENSGT00940000161661 ENSGT00940000158678 ENSGT00390000015792 ENSGT00940000158306 Pig-tailed macaque MODERN SPECIES 353 RTKN2 (ENSMNEG00000044923) ARID5B (ENSMNEG00000041462) CABCOCO1 (ENSMNEG00000031430) TMEM26 (ENSMNEG00000038130) RHOBTB1 (ENSMNEG00000042613) CDK1 (ENSMNEG00000043947) ANK3 (ENSMNEG00000034594) ENSMNEG00000044750 ENSMNEG00000029490 CCDC6 (ENSMNEG00000030697) MRLN (ENSMNEG00000014934) SLC16A9 (ENSMNEG00000029664) ENSMNEG00000031580 FAM13C (ENSMNEG00000044679) PHYHIPL (ENSMNEG00000035222) ENSMNEG00000030319 #22 BICC1 (ENSMNEG00000009601) TFAM (ENSMNEG00000030206) UBE2D1 (ENSMNEG00000040023) CISD1 (ENSMNEG00000039390) IPMK (ENSMNEG00000033112) Platyrrhini ANCESTRAL SPECIES 3 ENSGT00940000159662 ENSGT00940000156620 ENSGT00940000161101 ENSGT00940000162841.c.a ENSGT00950000183070.a.b.g.b.a ENSGT00390000016821 ENSGT00940000157226 ENSGT00940000154860 ENSGT00390000006196 ENSGT00950000183087.A.b.a ENSGT00390000010991 ENSGT00940000157405 ENSGT00390000013149 #20 ENSGT00390000012559 #21 ENSGT00390000008679 ENSGT00940000155426 #22 ENSGT00530000063981.b #23 ENSGT00390000006218 #24 ENSGT00940000160574 #25 ENSGT00440000034605 #26 ENSGT00390000016768 #28 ENSGT00940000154234.a #29 ENSGT00940000155379 #30 ENSGT00910000147087 ENSGT00530000063822.a.a #31 ENSGT00940000156046.e #32 ENSGT00390000001680 #33 ENSGT00940000159310 #34 ENSGT00940000160980 #35 ENSGT00390000018100 #36 ENSGT00940000157661 Cebidae ANCESTRAL SPECIES ENSGT00940000159662 ENSGT00940000156620 ENSGT00940000161101 ENSGT00940000162841.c.a ENSGT00950000183070.a.b.g.b.a ENSGT00390000016821 ENSGT00940000157226 ENSGT00940000154860 ENSGT00390000006196 ENSGT00950000183087.A.b.a ENSGT00390000010991 ENSGT00940000157405 ENSGT00390000013149 #20 ENSGT00390000012559 #21 ENSGT00390000008679 ENSGT00940000155426 #22 ENSGT00530000063981.b #23 ENSGT00390000006218 #24 ENSGT00940000160574 #25 ENSGT00440000034605 #26 ENSGT00390000016768 #28 ENSGT00940000154234.a #29 ENSGT00940000155379 #30 ENSGT00530000063822.a.a #31 ENSGT00940000156046.e #32 ENSGT00390000001680 #33 ENSGT00940000159310 #34 ENSGT00940000160980 #35 ENSGT00390000018100 #36 ENSGT00940000157661 ENSGT00390000009140 Cebidae_a ANCESTRAL SPECIES 10 ENSGT00940000159662 ENSGT00940000156620 ENSGT00940000161101 ENSGT00940000162841.c.a ENSGT00950000183070.a.b.g.b.a ENSGT00390000016821 ENSGT00940000157226 ENSGT00940000154860 ENSGT00390000006196 ENSGT00950000183087.A.b.a ENSGT00390000010991 ENSGT00940000157405 ENSGT00390000013149 #20 ENSGT00390000012559 #21 ENSGT00390000008679 ENSGT00940000155426 #22 ENSGT00530000063981.b #23 ENSGT00390000006218 #24 ENSGT00940000160574 #25 ENSGT00440000034605 #26 ENSGT00940000154234.a #29 ENSGT00940000155379 #30 ENSGT00530000063822.a.a #31 ENSGT00940000156046.e #32 ENSGT00390000001680 #33 ENSGT00940000159310 #34 ENSGT00940000160980 #35 ENSGT00390000018100 #36 ENSGT00940000157661 ENSGT00390000009140 ENSGT00940000153438.a.h Capuchin MODERN SPECIES 66 IFTAP (ENSCCAG00000029617) #20 RAG2 (ENSCCAG00000004467) #21 RAG1 (ENSCCAG00000020121) TRAF6 (ENSCCAG00000009055) #22 PRR5L (ENSCCAG00000026981) #23 COMMD9 (ENSCCAG00000025370) #24 LDLRAD3 (ENSCCAG00000025416) #25 TRIM44 (ENSCCAG00000023918) #26 PAMR1 (ENSCCAG00000026688) #29 SLC1A2 (ENSCCAG00000023288) #30 CD44 (ENSCCAG00000027898) #31 ENSCCAG00000026050 #32 APIP (ENSCCAG00000034199) #33 EHF (ENSCCAG00000024416) #34 ELF5 (ENSCCAG00000037404) #35 CAT (ENSCCAG00000033204) #36 ABTB2 (ENSCCAG00000036795) NAT10 (ENSCCAG00000003512) CAPRIN1 (ENSCCAG00000020172) Bolivian squirrel monkey MODERN SPECIES 42 ENSSBOG00000020375 ENSSBOG00000024546 C11orf96 (ENSSBOG00000012454) ALKBH3 (ENSSBOG00000023947) HSD17B12 (ENSSBOG00000023716) ENSSBOG00000026907 TTC17 (ENSSBOG00000027019) API5 (ENSSBOG00000021448) ENSSBOG00000029311 ENSSBOG00000031892 LRRC4C (ENSSBOG00000018653) ENSSBOG00000033020 IFTAP (ENSSBOG00000025933) #20 RAG2 (ENSSBOG00000017623) #21 RAG1 (ENSSBOG00000016673) TRAF6 (ENSSBOG00000028498) #22 PRR5L (ENSSBOG00000033062) #23 COMMD9 (ENSSBOG00000023383) #24 LDLRAD3 (ENSSBOG00000024561) #25 TRIM44 (ENSSBOG00000019501) #26 PAMR1 (ENSSBOG00000034633) #29 SLC1A2 (ENSSBOG00000031126) #30 CD44 (ENSSBOG00000020740) #31 ENSSBOG00000007623 #32 APIP (ENSSBOG00000027533) #33 EHF (ENSSBOG00000007293) #34 ELF5 (ENSSBOG00000025536) #35 CAT (ENSSBOG00000035672) #36 ABTB2 (ENSSBOG00000019878) NAT10 (ENSSBOG00000023643) CAPRIN1 (ENSSBOG00000029900) Marmoset MODERN SPECIES 2 ACCS (ENSCJAG00000011398) ENSCJAG00000011384 C11orf96 (ENSCJAG00000041387) ALKBH3 (ENSCJAG00000011353) HSD17B12 (ENSCJAG00000011325) ENSCJAG00000076955 TTC17 (ENSCJAG00000011232) ENSCJAG00000081434 ENSCJAG00000051814 ENSCJAG00000071318 ENSCJAG00000086386 ENSCJAG00000056043 ENSCJAG00000069702 RAG2 (ENSCJAG00000011084) #21 RAG1 (ENSCJAG00000039101) TRAF6 (ENSCJAG00000011070) #22 PRR5L (ENSCJAG00000044403) #23 COMMD9 (ENSCJAG00000011032) #24 LDLRAD3 (ENSCJAG00000011017) #25 TRIM44 (ENSCJAG00000011000) #26 ENSCJAG00000075599 ENSCJAG00000082010 FJX1 (ENSCJAG00000010998) #28 PAMR1 (ENSCJAG00000010977) #29 SLC1A2 (ENSCJAG00000010952) #30 CD44 (ENSCJAG00000010912) #31 PDHX (ENSCJAG00000010888) #32 APIP (ENSCJAG00000065396) #33 EHF (ENSCJAG00000010810) #34 ELF5 (ENSCJAG00000040519) #35 CAT (ENSCJAG00000010742) #36 Mas night monkey MODERN SPECIES 349 CD82 (ENSANAG00000036520) ALX4 (ENSANAG00000028117) EXT2 (ENSANAG00000027569) ACCS (ENSANAG00000023624) ACCSL (ENSANAG00000038530) ENSANAG00000021583 ENSANAG00000032918 ALKBH3 (ENSANAG00000033941) HSD17B12 (ENSANAG00000001245) TTC17 (ENSANAG00000033544) API5 (ENSANAG00000035535) LRRC4C (ENSANAG00000002444) IFTAP (ENSANAG00000034158) #20 RAG2 (ENSANAG00000020159) #21 RAG1 (ENSANAG00000020150) TRAF6 (ENSANAG00000027972) #22 PRR5L (ENSANAG00000020046) #23 COMMD9 (ENSANAG00000022827) #24 ENSANAG00000026763 LDLRAD3 (ENSANAG00000037192) #25 ENSANAG00000030501 TRIM44 (ENSANAG00000014196) #26 PAMR1 (ENSANAG00000029143) #29 SLC1A2 (ENSANAG00000020434) #30 ENSANAG00000025347 CD44 (ENSANAG00000029878) #31 ENSANAG00000015605 #32 APIP (ENSANAG00000038438) #33 EHF (ENSANAG00000024254) #34 ELF5 (ENSANAG00000016910) #35 CAT (ENSANAG00000030970) #36 Tarsier MODERN SPECIES 5009 CUNH11orf74 (ENSTSYG00000011833) #20 TRAF6 (ENSTSYG00000028225) #22 PRR5L (ENSTSYG00000031790) #23 ENSTSYG00000006704 #24 SMARCA2 (ENSTSYG00000003858) Euarchontoglires_A ANCESTRAL SPECIES 1 ENSGT00940000157667 ENSGT00940000158481 ENSGT00940000159662 ENSGT00940000156620 ENSGT00940000161101 ENSGT00940000162841 ENSGT00390000016821 ENSGT00940000157226 ENSGT00940000154860 ENSGT00390000006196 ENSGT00390000010991 ENSGT00940000157405 ENSGT00390000013149 #20 ENSGT00390000012559 #21 ENSGT00390000008679 ENSGT00940000155426 #22 ENSGT00530000063981.b #23 ENSGT00390000006218 #24 ENSGT00940000160574 #25 ENSGT00440000034605 #26 ENSGT00390000016768 #28 ENSGT00940000154234.a #29 ENSGT00940000155379 #30 ENSGT00530000063822.a.a #31 ENSGT00940000156046 #32 ENSGT00390000001680 #33 ENSGT00940000159310 #34 ENSGT00940000160980 #35 ENSGT00390000018100 #36 ENSGT00940000157661 ENSGT00390000009140 Glires ANCESTRAL SPECIES 1 ENSGT00940000157667 ENSGT00940000158481 ENSGT00940000159662 ENSGT00940000156620 ENSGT00940000161101 ENSGT00940000162841 ENSGT00390000016821 ENSGT00940000157226 ENSGT00940000154860 ENSGT00390000006196 ENSGT00390000010991 ENSGT00940000157405 ENSGT00390000013149 #20 ENSGT00390000012559 #21 ENSGT00390000008679 ENSGT00940000155426 #22 ENSGT00530000063981.b #23 ENSGT00390000006218 #24 ENSGT00940000160574 #25 ENSGT00440000034605 #26 ENSGT00390000016768 #28 ENSGT00940000154234.a #29 ENSGT00940000155379 #30 ENSGT00530000063822.a.a #31 ENSGT00940000156046 #32 ENSGT00390000001680 #33 ENSGT00940000159310 #34 ENSGT00940000160980 #35 ENSGT00390000018100 #36 ENSGT00940000157661 ENSGT00390000009140 Rodentia ANCESTRAL SPECIES 1 ENSGT00940000157667 ENSGT00940000158481 ENSGT00940000159662 ENSGT00940000156620 ENSGT00940000161101 ENSGT00940000162841 ENSGT00390000016821 ENSGT00940000157226 ENSGT00940000154860 ENSGT00390000006196 ENSGT00390000010991 ENSGT00940000157405 ENSGT00390000013149 #20 ENSGT00390000012559 #21 ENSGT00390000008679 ENSGT00940000155426 #22 ENSGT00530000063981.b #23 ENSGT00390000006218 #24 ENSGT00940000160574 #25 ENSGT00440000034605 #26 ENSGT00390000016768 #28 ENSGT00940000154234.a #29 ENSGT00940000155379 #30 ENSGT00530000063822.a.a #31 ENSGT00940000156046 #32 ENSGT00390000001680 #33 ENSGT00940000159310 #34 ENSGT00940000160980 #35 ENSGT00390000018100 #36 ENSGT00940000157661 ENSGT00390000009140 Rodentia_B ANCESTRAL SPECIES 5 ENSGT00940000157667 ENSGT00940000158481 ENSGT00940000159662 ENSGT00940000156620 ENSGT00940000161101 ENSGT00940000162841 ENSGT00390000016821 ENSGT00940000157226 ENSGT00940000154860 ENSGT00390000006196 ENSGT00390000010991 ENSGT00940000157405 ENSGT00390000013149 #20 ENSGT00390000012559 #21 ENSGT00390000008679 ENSGT00940000155426 #22 ENSGT00530000063981.b #23 ENSGT00390000006218 #24 ENSGT00940000160574 #25 ENSGT00440000034605 #26 ENSGT00390000016768 #28 ENSGT00940000154234.a #29 ENSGT00940000155379 #30 ENSGT00530000063822.a.a #31 ENSGT00940000156046 #32 ENSGT00390000001680 #33 ENSGT00940000159310 #34 ENSGT00940000160980 #35 ENSGT00390000018100 #36 ENSGT00940000157661 ENSGT00390000009140 Myomorpha ANCESTRAL SPECIES 4 ENSGT00940000157667 ENSGT00940000158481 ENSGT00940000159662 ENSGT00940000156620 ENSGT00940000161101 ENSGT00940000162841 ENSGT00390000016821 ENSGT00940000157226.f ENSGT00940000154860 ENSGT00390000006196 ENSGT00390000010991 ENSGT00940000157405 ENSGT00390000013149 #20 ENSGT00390000012559 #21 ENSGT00390000008679 ENSGT00940000155426 #22 ENSGT00530000063981.b #23 ENSGT00390000006218 #24 ENSGT00940000160574 #25 ENSGT00440000034605 #26 ENSGT00390000016768 #28 ENSGT00940000154234.a #29 ENSGT00940000155379 #30 ENSGT00530000063822.a.a #31 ENSGT00940000156046 #32 ENSGT00390000001680 #33 ENSGT00940000159310 #34 ENSGT00940000160980 #35 ENSGT00390000018100 #36 ENSGT00940000157661 ENSGT00390000009140 Muroidea ANCESTRAL SPECIES 2 ENSGT00940000157667 ENSGT00940000158481 ENSGT00940000159662 ENSGT00940000156620 ENSGT00940000161101 ENSGT00940000162841 ENSGT00390000016821 ENSGT00940000157226.f ENSGT00940000154860 ENSGT00390000006196 ENSGT00390000010991 ENSGT00940000157405 ENSGT00390000013149 #20 ENSGT00390000012559 #21 ENSGT00390000008679 ENSGT00940000155426 #22 ENSGT00530000063981.b #23 ENSGT00390000006218 #24 ENSGT00940000160574 #25 ENSGT00440000034605 #26 ENSGT00390000016768 #28 ENSGT00940000154234.a #29 ENSGT00940000155379 #30 ENSGT00530000063822.a.a #31 ENSGT00940000156046 #32 ENSGT00390000001680 #33 ENSGT00940000159310 #34 ENSGT00940000160980 #35 ENSGT00390000018100 #36 ENSGT00940000157661 ENSGT00390000009140 Muroidea_A ANCESTRAL SPECIES 2 ENSGT00940000157667 ENSGT00940000158481 ENSGT00940000159662 ENSGT00940000156620 ENSGT00940000161101 ENSGT00940000162841 ENSGT00390000016821 ENSGT00940000157226.f ENSGT00940000154860 ENSGT00390000006196 ENSGT00390000010991 ENSGT00940000157405 ENSGT00390000013149 #20 ENSGT00390000012559 #21 ENSGT00390000008679 ENSGT00940000155426 #22 ENSGT00530000063981.b #23 ENSGT00390000006218 #24 ENSGT00940000160574 #25 ENSGT00440000034605 #26 ENSGT00390000016768 #28 ENSGT00940000154234.a #29 ENSGT00940000155379 #30 ENSGT00530000063822.a.a #31 ENSGT00940000156046 #32 ENSGT00390000001680 #33 ENSGT00940000159310 #34 ENSGT00940000160980 #35 ENSGT00390000018100 #36 ENSGT00940000157661 ENSGT00390000009140 Cricetidae ANCESTRAL SPECIES 5 ENSGT00940000157667 ENSGT00940000158481 ENSGT00940000159662 ENSGT00940000156620 ENSGT00940000161101 ENSGT00940000162841 ENSGT00390000016821 ENSGT00940000157226.f ENSGT00940000154860 ENSGT00390000006196 ENSGT00390000010991 ENSGT00940000157405 ENSGT00390000013149 #20 ENSGT00390000012559 #21 ENSGT00390000008679 ENSGT00940000155426 #22 ENSGT00530000063981.b #23 ENSGT00390000006218 #24 ENSGT00940000160574 #25 ENSGT00440000034605 #26 ENSGT00390000016768 #28 ENSGT00940000154234.a #29 ENSGT00940000155379 #30 ENSGT00530000063822.a.a #31 ENSGT00940000156046 #32 ENSGT00390000001680 #33 ENSGT00940000159310 #34 ENSGT00940000160980 #35 ENSGT00390000018100 #36 ENSGT00940000157661 ENSGT00390000009140 Cricetinae ANCESTRAL SPECIES 1 ENSGT00390000017249 ENSGT00940000157667 ENSGT00940000158481 ENSGT00940000159662 ENSGT00940000156620 ENSGT00940000161101 ENSGT00390000016821 ENSGT00940000157226.f ENSGT00940000154860 ENSGT00390000006196 ENSGT00390000010991 ENSGT00940000157405 ENSGT00390000013149 #20 ENSGT00390000012559 #21 ENSGT00390000008679 ENSGT00940000155426 #22 ENSGT00530000063981.b #23 ENSGT00390000006218 #24 ENSGT00940000160574 #25 ENSGT00550000074784.a.b ENSGT00440000034605 #26 ENSGT00390000016768 #28 ENSGT00940000154234.a #29 ENSGT00940000155379 #30 ENSGT00530000063822.a.a #31 ENSGT00940000156046 #32 ENSGT00390000001680 #33 ENSGT00940000159310 #34 ENSGT00940000160980 #35 ENSGT00390000018100 #36 ENSGT00940000157661 Chinese hamster chok1gshd MODERN SPECIES 188 Accs (ENSCGRG00001017403) Gm13889 (ENSCGRG00001015067) Alkbh3 (ENSCGRG00001014489) Hsd17b12 (ENSCGRG00001024805) Ttc17 (ENSCGRG00001008891) ENSCGRG00001023209 ENSCGRG00001002994 ENSCGRG00001022153 Lrrc4c (ENSCGRG00001011183) ENSCGRG00001011370 ENSCGRG00001002351 ENSCGRG00001003416 Iftap (ENSCGRG00001020974) #20 Rag2 (ENSCGRG00001011151) #21 Rag1 (ENSCGRG00001002046) Traf6 (ENSCGRG00001019275) #22 Prr5l (ENSCGRG00001018581) #23 ENSCGRG00001017501 #24 Ldlrad3 (ENSCGRG00001024912) #25 ENSCGRG00001024835 Trim44 (ENSCGRG00001024631) #26 Fjx1 (ENSCGRG00001010732) #28 Pamr1 (ENSCGRG00001023148) #29 Slc1a2 (ENSCGRG00001023537) #30 Cd44 (ENSCGRG00001022042) #31 Pdhx (ENSCGRG00001020048) #32 APIP (ENSCGRG00001019435) #33 Ehf (ENSCGRG00001018872) #34 Elf5 (ENSCGRG00001017703) #35 Cat (ENSCGRG00001022758) #36 Abtb2 (ENSCGRG00001022262) Golden Hamster MODERN SPECIES 618 Trp53i11 (ENSMAUG00000010266) Tspan18 (ENSMAUG00000003687) Cd82 (ENSMAUG00000003346) Alx4 (ENSMAUG00000002663) Ext2 (ENSMAUG00000009741) Accs (ENSMAUG00000007912) ENSMAUG00000010918 Alkbh3 (ENSMAUG00000009317) Hsd17b12 (ENSMAUG00000011836) Ttc17 (ENSMAUG00000010822) ENSMAUG00000008950 Lrrc4c (ENSMAUG00000008203) Iftap (ENSMAUG00000010224) #20 Rag2 (ENSMAUG00000010934) #21 Rag1 (ENSMAUG00000010819) Traf6 (ENSMAUG00000005756) #22 Prr5l (ENSMAUG00000004032) #23 Commd9 (ENSMAUG00000003287) #24 Ldlrad3 (ENSMAUG00000009660) #25 ENSMAUG00000010163 ENSMAUG00000010071 Trim44 (ENSMAUG00000008730) #26 Fjx1 (ENSMAUG00000002426) #28 Pamr1 (ENSMAUG00000007447) #29 Slc1a2 (ENSMAUG00000008324) #30 Cd44 (ENSMAUG00000004546) #31 Pdhx (ENSMAUG00000002883) #32 Apip (ENSMAUG00000001671) #33 Ehf (ENSMAUG00000004776) #34 Elf5 (ENSMAUG00000003650) #35 Cat (ENSMAUG00000012493) #36 Cricetidae_B ANCESTRAL SPECIES 34 ENSGT00940000157667 ENSGT00940000158481 ENSGT00940000159662 ENSGT00940000156620 ENSGT00940000161101 ENSGT00940000162841 ENSGT00390000016821 ENSGT00940000157226.f ENSGT00940000154860 ENSGT00390000006196 ENSGT00390000010991 ENSGT00940000157405 ENSGT00390000013149 #20 ENSGT00390000012559 #21 ENSGT00390000008679 ENSGT00940000155426 #22 ENSGT00530000063981.b #23 ENSGT00390000006218 #24 ENSGT00940000160574 #25 ENSGT00440000034605 #26 ENSGT00390000016768 #28 ENSGT00940000154234.a #29 ENSGT00940000155379 #30 ENSGT00530000063822.a.a #31 ENSGT00940000156046 #32 ENSGT00390000001680 #33 ENSGT00940000159310 #34 ENSGT00940000160980 #35 ENSGT00390000018100 #36 ENSGT00940000157661 ENSGT00390000009140 Northern American deer mouse MODERN SPECIES 17 Alx4 (ENSPEMG00000022456) Ext2 (ENSPEMG00000022691) Accs (ENSPEMG00000016421) Gm13889 (ENSPEMG00000025209) Alkbh3 (ENSPEMG00000019372) Hsd17b12 (ENSPEMG00000019400) Ttc17 (ENSPEMG00000019488) Api5 (ENSPEMG00000019874) ENSPEMG00000012394 Lrrc4c (ENSPEMG00000012198) ENSPEMG00000025399 ENSPEMG00000028280 Iftap (ENSPEMG00000007125) #20 Rag2 (ENSPEMG00000018407) #21 Rag1 (ENSPEMG00000018077) Traf6 (ENSPEMG00000015556) #22 Prr5l (ENSPEMG00000014248) #23 Commd9 (ENSPEMG00000011457) #24 Ldlrad3 (ENSPEMG00000010990) #25 Trim44 (ENSPEMG00000030265) #26 Fjx1 (ENSPEMG00000005586) #28 Pamr1 (ENSPEMG00000012941) #29 Slc1a2 (ENSPEMG00000010827) #30 Cd44 (ENSPEMG00000020598) #31 Pdhx (ENSPEMG00000015465) #32 Apip (ENSPEMG00000012212) #33 Ehf (ENSPEMG00000016561) #34 ENSPEMG00000015756 Elf5 (ENSPEMG00000004489) #35 Cat (ENSPEMG00000005139) #36 Abtb2 (ENSPEMG00000014140) Prairie vole MODERN SPECIES 81 Accs (ENSMOCG00000015335) Accsl (ENSMOCG00000009949) ENSMOCG00000010059 Alkbh3 (ENSMOCG00000012816) Hsd17b12 (ENSMOCG00000007308) Ttc17 (ENSMOCG00000001736) Api5 (ENSMOCG00000021910) ENSMOCG00000017344 Lrrc4c (ENSMOCG00000005308) ENSMOCG00000016690 ENSMOCG00000016731 ENSMOCG00000001289 Iftap (ENSMOCG00000016114) #20 Rag2 (ENSMOCG00000011926) #21 Rag1 (ENSMOCG00000008467) Traf6 (ENSMOCG00000016757) #22 Prr5l (ENSMOCG00000020211) #23 Commd9 (ENSMOCG00000021561) #24 Ldlrad3 (ENSMOCG00000000619) #25 Trim44 (ENSMOCG00000006259) #26 Fjx1 (ENSMOCG00000004525) #28 Pamr1 (ENSMOCG00000003031) #29 Slc1a2 (ENSMOCG00000022434) #30 Cd44 (ENSMOCG00000021544) #31 Pdhx (ENSMOCG00000021084) #32 Apip (ENSMOCG00000015378) #33 Ehf (ENSMOCG00000003108) #34 Elf5 (ENSMOCG00000021785) #35 Cat (ENSMOCG00000019198) #36 Abtb2 (ENSMOCG00000013912) Nat10 (ENSMOCG00000021454) Murinae ANCESTRAL SPECIES 1 ENSGT00940000157667 ENSGT00940000158481 ENSGT00940000159662 ENSGT00940000156620 ENSGT00940000161101 ENSGT00940000162841 ENSGT00390000016821 ENSGT00940000157226.f ENSGT00940000154860 ENSGT00390000006196 ENSGT00390000010991 ENSGT00940000157405 ENSGT00390000013149 #20 ENSGT00390000012559 #21 ENSGT00390000008679 ENSGT00940000155426 #22 ENSGT00530000063981.b #23 ENSGT00390000006218 #24 ENSGT00940000160574 #25 ENSGT00440000034605 #26 ENSGT00390000016768 #28 ENSGT00940000154234.a #29 ENSGT00940000155379 #30 ENSGT00530000063822.a.a #31 ENSGT00940000156046 #32 ENSGT00390000001680 #33 ENSGT00940000159310 #34 ENSGT00940000160980 #35 ENSGT00390000018100 #36 ENSGT00940000157661 ENSGT00390000009140 Mus ANCESTRAL SPECIES 1 ENSGT00860000136063 ENSGT00940000159662 ENSGT00940000156620 ENSGT00940000161101 ENSGT00940000162841 ENSGT00390000016821 ENSGT00940000157226.e ENSGT00940000157226.f ENSGT00940000154860 ENSGT00390000006196 ENSGT00390000010991 ENSGT00940000157405 ENSGT00390000013149 #20 ENSGT00390000012559 #21 ENSGT00390000008679 ENSGT00940000155426 #22 ENSGT00530000063981.b #23 ENSGT00390000006218 #24 ENSGT00940000160574 #25 ENSGT00440000034605 #26 ENSGT00390000016768 #28 ENSGT00940000154234.a #29 ENSGT00940000155379 #30 ENSGT00530000063822.a.a #31 ENSGT00940000156046 #32 ENSGT00390000001680 #33 ENSGT00940000159310 #34 ENSGT00940000160980 #35 ENSGT00390000018100 #36 ENSGT00940000157661 ENSGT00390000009140 Mus_A ANCESTRAL SPECIES ENSGT00860000136063 ENSGT00940000159662 ENSGT00940000156620 ENSGT00940000161101 ENSGT00940000162841 ENSGT00390000016821 ENSGT00940000157226.e ENSGT00940000157226.f ENSGT00940000154860 ENSGT00390000006196 ENSGT00390000010991 ENSGT00940000157405 ENSGT00390000013149 #20 ENSGT00390000012559 #21 ENSGT00390000008679 ENSGT00940000155426 #22 ENSGT00530000063981.b #23 ENSGT00390000006218 #24 ENSGT00940000160574 #25 ENSGT00440000034605 #26 ENSGT00390000016768 #28 ENSGT00940000154234.a #29 ENSGT00940000155379 #30 ENSGT00530000063822.a.a #31 ENSGT00940000156046 #32 ENSGT00390000001680 #33 ENSGT00940000159310 #34 ENSGT00940000160980 #35 ENSGT00390000018100 #36 ENSGT00940000157661 ENSGT00390000009140 Mus_B ANCESTRAL SPECIES 1 ENSGT00860000136063 ENSGT00940000159662 ENSGT00940000156620 ENSGT00940000161101 ENSGT00940000162841 ENSGT00390000016821 ENSGT00940000157226.e ENSGT00940000157226.f ENSGT00940000154860 ENSGT00390000006196 ENSGT00390000010991 ENSGT00940000157405 ENSGT00390000013149 #20 ENSGT00390000012559 #21 ENSGT00390000008679 ENSGT00940000155426 #22 ENSGT00530000063981.b #23 ENSGT00390000006218 #24 ENSGT00940000160574 #25 ENSGT00440000034605 #26 ENSGT00390000016768 #28 ENSGT00940000154234.a #29 ENSGT00940000155379 #30 ENSGT00530000063822.a.a #31 ENSGT00940000156046 #32 ENSGT00390000001680 #33 ENSGT00940000159310 #34 ENSGT00940000160980 #35 ENSGT00390000018100 #36 ENSGT00940000157661 ENSGT00390000009140 Mus_C ANCESTRAL SPECIES ENSGT00860000136063 ENSGT00940000159662 ENSGT00940000156620 ENSGT00940000161101 ENSGT00940000162841 ENSGT00390000016821 ENSGT00940000157226.e ENSGT00940000157226.f ENSGT00940000154860 ENSGT00390000006196 ENSGT00390000010991 ENSGT00940000157405 ENSGT00390000013149 #20 ENSGT00390000012559 #21 ENSGT00390000008679 ENSGT00940000155426 #22 ENSGT00530000063981.b #23 ENSGT00390000006218 #24 ENSGT00940000160574 #25 ENSGT00440000034605 #26 ENSGT00390000016768 #28 ENSGT00940000154234.a #29 ENSGT00940000155379 #30 ENSGT00530000063822.a.a #31 ENSGT00940000156046 #32 ENSGT00390000001680 #33 ENSGT00940000159310 #34 ENSGT00940000160980 #35 ENSGT00390000018100 #36 ENSGT00940000157661 ENSGT00390000009140 spretus MODERN SPECIES 11 MGP_SPRETEiJ_G0024898 Alx4 (MGP_SPRETEiJ_G0024899) Ext2 (MGP_SPRETEiJ_G0024900) Accs (MGP_SPRETEiJ_G0024901) Accsl (MGP_SPRETEiJ_G0024902) Gm13889 (MGP_SPRETEiJ_G0024903) MGP_SPRETEiJ_G0024904 Alkbh3 (MGP_SPRETEiJ_G0024905) Hsd17b12 (MGP_SPRETEiJ_G0024906) Ttc17 (MGP_SPRETEiJ_G0024907) Api5 (MGP_SPRETEiJ_G0024908) Lrrc4c (MGP_SPRETEiJ_G0024909) Iftap (MGP_SPRETEiJ_G0024910) #20 Rag2 (MGP_SPRETEiJ_G0024911) #21 Rag1 (MGP_SPRETEiJ_G0024912) Traf6 (MGP_SPRETEiJ_G0024913) #22 Prr5l (MGP_SPRETEiJ_G0024914) #23 Commd9 (MGP_SPRETEiJ_G0024915) #24 Ldlrad3 (MGP_SPRETEiJ_G0024916) #25 Trim44 (MGP_SPRETEiJ_G0024917) #26 Fjx1 (MGP_SPRETEiJ_G0024918) #28 Pamr1 (MGP_SPRETEiJ_G0024919) #29 Slc1a2 (MGP_SPRETEiJ_G0024920) #30 Cd44 (MGP_SPRETEiJ_G0024921) #31 Pdhx (MGP_SPRETEiJ_G0024922) #32 Apip (MGP_SPRETEiJ_G0024923) #33 Ehf (MGP_SPRETEiJ_G0024924) #34 Elf5 (MGP_SPRETEiJ_G0024925) #35 Cat (MGP_SPRETEiJ_G0024926) #36 Abtb2 (MGP_SPRETEiJ_G0024927) Nat10 (MGP_SPRETEiJ_G0024928) Steppe mouse MODERN SPECIES 12 Iftap (ENSMSIG00000004799) #20 Rag2 (ENSMSIG00000004837) #21 Rag1 (ENSMSIG00000004846) Traf6 (ENSMSIG00000004857) #22 Prr5l (ENSMSIG00000004870) #23 Commd9 (ENSMSIG00000004921) #24 Ldlrad3 (ENSMSIG00000004965) #25 ENSMSIG00000004991 Trim44 (ENSMSIG00000005008) #26 Fjx1 (ENSMSIG00000005059) #28 Pamr1 (ENSMSIG00000005073) #29 Slc1a2 (ENSMSIG00000005100) #30 Cd44 (ENSMSIG00000005261) #31 Pdhx (ENSMSIG00000006094) #32 ENSMSIG00000006147 #33 Ehf (ENSMSIG00000006198) #34 Elf5 (ENSMSIG00000006297) #35 Cat (ENSMSIG00000006347) #36 Abtb2 (ENSMSIG00000006424) Mouse MODERN SPECIES 11 Cd82 (ENSMUSG00000027215) Alx4 (ENSMUSG00000040310) Ext2 (ENSMUSG00000027198) Accs (ENSMUSG00000040272) Accsl (ENSMUSG00000075023) Gm13889 (ENSMUSG00000087006) Gm27027 (ENSMUSG00000098004) Alkbh3 (ENSMUSG00000040174) Hsd17b12 (ENSMUSG00000027195) Ttc17 (ENSMUSG00000027194) Api5 (ENSMUSG00000027193) Lrrc4c (ENSMUSG00000050587) Iftap (ENSMUSG00000027165) #20 Rag2 (ENSMUSG00000032864) #21 Rag1 (ENSMUSG00000061311) Traf6 (ENSMUSG00000027164) #22 Prr5l (ENSMUSG00000032841) #23 Commd9 (ENSMUSG00000027163) #24 Ldlrad3 (ENSMUSG00000048058) #25 Trim44 (ENSMUSG00000027189) #26 Fjx1 (ENSMUSG00000075012) #28 Pamr1 (ENSMUSG00000027188) #29 Slc1a2 (ENSMUSG00000005089) #30 Cd44 (ENSMUSG00000005087) #31 Pdhx (ENSMUSG00000010914) #32 Apip (ENSMUSG00000010911) #33 Ehf (ENSMUSG00000012350) #34 Elf5 (ENSMUSG00000027186) #35 Cat (ENSMUSG00000027187) #36 Abtb2 (ENSMUSG00000032724) Nat10 (ENSMUSG00000027185) Ryukyu mouse MODERN SPECIES 11 MGP_CAROLIEiJ_G0023988 Alx4 (MGP_CAROLIEiJ_G0023989) Ext2 (MGP_CAROLIEiJ_G0023990) Accs (MGP_CAROLIEiJ_G0023991) MGP_CAROLIEiJ_G0023992 Gm13889 (MGP_CAROLIEiJ_G0023993) MGP_CAROLIEiJ_G0023994 Alkbh3 (MGP_CAROLIEiJ_G0023995) MGP_CAROLIEiJ_G0023996 Ttc17 (MGP_CAROLIEiJ_G0023997) Api5 (MGP_CAROLIEiJ_G0023998) Lrrc4c (MGP_CAROLIEiJ_G0023999) Iftap (MGP_CAROLIEiJ_G0024000) #20 Rag2 (MGP_CAROLIEiJ_G0024001) #21 Rag1 (MGP_CAROLIEiJ_G0024002) Traf6 (MGP_CAROLIEiJ_G0024003) #22 Prr5l (MGP_CAROLIEiJ_G0024004) #23 Commd9 (MGP_CAROLIEiJ_G0024005) #24 Ldlrad3 (MGP_CAROLIEiJ_G0024006) #25 Trim44 (MGP_CAROLIEiJ_G0024007) #26 Fjx1 (MGP_CAROLIEiJ_G0024008) #28 Pamr1 (MGP_CAROLIEiJ_G0024009) #29 Slc1a2 (MGP_CAROLIEiJ_G0024010) #30 Cd44 (MGP_CAROLIEiJ_G0024011) #31 Pdhx (MGP_CAROLIEiJ_G0024012) #32 Apip (MGP_CAROLIEiJ_G0024013) #33 Ehf (MGP_CAROLIEiJ_G0024014) #34 Elf5 (MGP_CAROLIEiJ_G0024015) #35 Cat (MGP_CAROLIEiJ_G0024016) #36 Abtb2 (MGP_CAROLIEiJ_G0024017) MGP_CAROLIEiJ_G0024018 Shrew mouse MODERN SPECIES 16 MGP_PahariEiJ_G0025424 Alx4 (MGP_PahariEiJ_G0025425) Ext2 (MGP_PahariEiJ_G0025426) Accs (MGP_PahariEiJ_G0025427) Accsl (MGP_PahariEiJ_G0025428) Gm13889 (MGP_PahariEiJ_G0025429) MGP_PahariEiJ_G0025430 Alkbh3 (MGP_PahariEiJ_G0025431) Hsd17b12 (MGP_PahariEiJ_G0025432) Ttc17 (MGP_PahariEiJ_G0025433) Api5 (MGP_PahariEiJ_G0025434) Lrrc4c (MGP_PahariEiJ_G0025435) MGP_PahariEiJ_G0025436 #20 Rag2 (MGP_PahariEiJ_G0025437) #21 Rag1 (MGP_PahariEiJ_G0025438) Traf6 (MGP_PahariEiJ_G0025439) #22 Prr5l (MGP_PahariEiJ_G0025440) #23 Commd9 (MGP_PahariEiJ_G0025441) #24 Ldlrad3 (MGP_PahariEiJ_G0025442) #25 Trim44 (MGP_PahariEiJ_G0025443) #26 Fjx1 (MGP_PahariEiJ_G0025444) #28 Pamr1 (MGP_PahariEiJ_G0025445) #29 Slc1a2 (MGP_PahariEiJ_G0025446) #30 Cd44 (MGP_PahariEiJ_G0025447) #31 Pdhx (MGP_PahariEiJ_G0025448) #32 Apip (MGP_PahariEiJ_G0025449) #33 Ehf (MGP_PahariEiJ_G0025450) #34 Elf5 (MGP_PahariEiJ_G0025451) #35 Cat (MGP_PahariEiJ_G0025452) #36 Abtb2 (MGP_PahariEiJ_G0025453) Nat10 (MGP_PahariEiJ_G0025454) Rat MODERN SPECIES 13 Accs (ENSRNOG00000009199) Accsl (ENSRNOG00000042533) RGD1564664 (ENSRNOG00000055564) Alkbh3 (ENSRNOG00000021678) Hsd17b12 (ENSRNOG00000009630) Timm23-ps8 (ENSRNOG00000032900) Ttc17 (ENSRNOG00000010495) Api5 (ENSRNOG00000009689) ENSRNOG00000066316 Lrrc4c (ENSRNOG00000029798) AABR07053065.1 (ENSRNOG00000004381) LOC499843 (ENSRNOG00000032177) Iftap (ENSRNOG00000037567) #20 Rag2 (ENSRNOG00000004623) #21 Rag1 (ENSRNOG00000004630) Traf6 (ENSRNOG00000004639) #22 Prr5l (ENSRNOG00000004666) #23 Commd9 (ENSRNOG00000004755) #24 Ldlrad3 (ENSRNOG00000058157) #25 Rpl21 (ENSRNOG00000069969) Trim44 (ENSRNOG00000005191) #26 Fjx1 (ENSRNOG00000005347) #28 Pamr1 (ENSRNOG00000005348) #29 Slc1a2 (ENSRNOG00000005479) #30 Cd44 (ENSRNOG00000006094) #31 Pdhx (ENSRNOG00000006947) #32 Apip (ENSRNOG00000007446) #33 Ehf (ENSRNOG00000007484) #34 Elf5 (ENSRNOG00000008282) #35 Cat (ENSRNOG00000008364) #36 Abtb2 (ENSRNOG00000008510) Upper Galilee mountains blind mole rat MODERN SPECIES 1631 Iftap (ENSNGAG00000018262) #20 Rag2 (ENSNGAG00000015708) #21 Rag1 (ENSNGAG00000006347) Traf6 (ENSNGAG00000018446) #22 ENSNGAG00000011864 Prr5l (ENSNGAG00000021774) #23 Commd9 (ENSNGAG00000015597) #24 Ldlrad3 (ENSNGAG00000004668) #25 Trim44 (ENSNGAG00000014577) #26 Pamr1 (ENSNGAG00000018952) #29 Slc1a2 (ENSNGAG00000011178) #30 Cd44 (ENSNGAG00000019111) #31 Pdhx (ENSNGAG00000023421) #32 Apip (ENSNGAG00000022366) #33 Ehf (ENSNGAG00000022135) #34 Elf5 (ENSNGAG00000021632) #35 Cat (ENSNGAG00000000722) #36 Abtb2 (ENSNGAG00000010042) Nat10 (ENSNGAG00000013486) Lesser Egyptian jerboa MODERN SPECIES 79 Rad51 (ENSJJAG00000019338) Rmdn3 (ENSJJAG00000020742) Gchfr (ENSJJAG00000005040) Dnajc17 (ENSJJAG00000011274) Zfyve19 (ENSJJAG00000022792) ENSJJAG00000011645 Spint1 (ENSJJAG00000014215) Rhov (ENSJJAG00000005067) Vps18 (ENSJJAG00000015321) Dll4 (ENSJJAG00000019587) Ino80 (ENSJJAG00000016166) ENSJJAG00000000316 ENSJJAG00000005674 ENSJJAG00000018584 ENSJJAG00000004045 Traf6 (ENSJJAG00000019637) #22 ENSJJAG00000024040 #23 ENSJJAG00000009576 #24 Pamr1 (ENSJJAG00000002115) #29 ENSJJAG00000012579 #30 ENSJJAG00000017687 #30 ENSJJAG00000024031 #31 Pdhx (ENSJJAG00000007859) #32 ENSJJAG00000011063 #33 Ehf (ENSJJAG00000023839) #34 Elf5 (ENSJJAG00000003357) #35 Cat (ENSJJAG00000012897) #36 Abtb2 (ENSJJAG00000014143) Nat10 (ENSJJAG00000023042) Lmo2 (ENSJJAG00000020848) Fbxo3 (ENSJJAG00000022887) Kangaroo rat MODERN SPECIES 365 Lrrc4c (ENSDORG00000023251) Iftap (ENSDORG00000010963) #20 Rag2 (ENSDORG00000027476) #21 Rag1 (ENSDORG00000028200) Traf6 (ENSDORG00000028957) #22 Prr5l (ENSDORG00000023439) #23 ENSDORG00000023878 Commd9 (ENSDORG00000002082) #24 Ldlrad3 (ENSDORG00000027771) #25 Trim44 (ENSDORG00000003756) #26 Fjx1 (ENSDORG00000028183) #28 Pamr1 (ENSDORG00000009499) #29 ENSDORG00000023527 Slc1a2 (ENSDORG00000014749) #30 ENSDORG00000014748 #31 Pdhx (ENSDORG00000006342) #32 Apip (ENSDORG00000006346) #33 Ehf (ENSDORG00000007642) #34 Elf5 (ENSDORG00000029279) #35 Cat (ENSDORG00000007636) #36 Rodentia_A ANCESTRAL SPECIES 1 ENSGT00940000157667 ENSGT00940000158481 ENSGT00940000159662 ENSGT00940000156620 ENSGT00940000161101 ENSGT00940000162841 ENSGT00390000016821 ENSGT00940000157226 ENSGT00940000154860 ENSGT00390000006196 ENSGT00390000010991 ENSGT00940000157405 ENSGT00390000013149 #20 ENSGT00390000012559 #21 ENSGT00390000008679 ENSGT00940000155426 #22 ENSGT00530000063981.b #23 ENSGT00390000006218 #24 ENSGT00940000160574 #25 ENSGT00440000034605 #26 ENSGT00390000016768 #28 ENSGT00940000154234.a #29 ENSGT00940000155379 #30 ENSGT00530000063822.a.a #31 ENSGT00940000156046 #32 ENSGT00390000001680 #33 ENSGT00940000159310 #34 ENSGT00940000160980 #35 ENSGT00390000018100 #36 ENSGT00940000157661 ENSGT00390000009140 Sciuridae ANCESTRAL SPECIES 2 ENSGT00940000157667 ENSGT00940000158481 ENSGT00940000159662 ENSGT00940000156620 ENSGT00940000161101 ENSGT00940000162841 ENSGT00390000016821 ENSGT00940000157226 ENSGT00940000154860 ENSGT00390000006196 ENSGT00390000010991 ENSGT00940000157405 ENSGT00390000013149 #20 ENSGT00390000012559 #21 ENSGT00390000008679 ENSGT00940000155426 #22 ENSGT00530000063981.b #23 ENSGT00390000006218 #24 ENSGT00940000160574 #25 ENSGT00440000034605.f.a #26 ENSGT00390000016768 #28 ENSGT00940000154234.a #29 ENSGT00940000155379 #30 ENSGT00530000063822.a.a #31 ENSGT00940000156046 #32 ENSGT00390000001680 #33 ENSGT00940000159310 #34 ENSGT00940000160980 #35 ENSGT00390000018100 #36 ENSGT00940000157661 ENSGT00390000009140 Marmotini ANCESTRAL SPECIES 22 ENSGT00940000157667 ENSGT00940000158481 ENSGT00940000159662 ENSGT00940000156620 ENSGT00940000161101 ENSGT00940000162841 ENSGT00390000016821 ENSGT00940000157226 ENSGT00940000154860 ENSGT00390000006196 ENSGT00390000010991 ENSGT00940000157405 ENSGT00390000013149 #20 ENSGT00390000012559 #21 ENSGT00390000008679 ENSGT00940000155426 #22 ENSGT00530000063981.b #23 ENSGT00390000006218 #24 ENSGT00940000160574 #25 ENSGT00440000034605.f.a #26 ENSGT00940000154234.a #29 ENSGT00940000155379 #30 ENSGT00530000063822.a.a #31 ENSGT00940000156046 #32 ENSGT00390000001680 #33 ENSGT00940000159310 #34 ENSGT00940000160980 #35 ENSGT00390000018100 #36 ENSGT00940000157661 ENSGT00390000009140.g ENSGT00940000153438.a Alpin marmot MODERN SPECIES 3 ALX4 (ENSMMMG00000011816) EXT2 (ENSMMMG00000011786) ACCS (ENSMMMG00000011728) ENSMMMG00000011721 ACCSL (ENSMMMG00000011649) C11orf96 (ENSMMMG00000011645) ALKBH3 (ENSMMMG00000011630) ENSMMMG00000011626 HSD17B12 (ENSMMMG00000011610) TTC17 (ENSMMMG00000011550) API5 (ENSMMMG00000011483) LRRC4C (ENSMMMG00000011362) IFTAP (ENSMMMG00000011311) #20 RAG2 (ENSMMMG00000011304) #21 RAG1 (ENSMMMG00000011298) TRAF6 (ENSMMMG00000011285) #22 PRR5L (ENSMMMG00000011238) #23 COMMD9 (ENSMMMG00000011235) #24 LDLRAD3 (ENSMMMG00000011216) #25 TRIM44 (ENSMMMG00000011195) #26 PAMR1 (ENSMMMG00000011162) #29 SLC1A2 (ENSMMMG00000011014) #30 CD44 (ENSMMMG00000010323) #31 PDHX (ENSMMMG00000010279) #32 APIP (ENSMMMG00000010262) #33 EHF (ENSMMMG00000010179) #34 ELF5 (ENSMMMG00000010124) #35 CAT (ENSMMMG00000010087) #36 ABTB2 (ENSMMMG00000010060) NAT10 (ENSMMMG00000009992) CAPRIN1 (ENSMMMG00000008164) Marmotini_b ANCESTRAL SPECIES 23 ENSGT00940000157667 ENSGT00940000158481 ENSGT00940000159662 ENSGT00940000156620 ENSGT00940000161101 ENSGT00940000162841 ENSGT00390000016821 ENSGT00940000157226 ENSGT00940000154860 ENSGT00390000006196 ENSGT00390000010991 ENSGT00940000157405 ENSGT00390000013149 #20 ENSGT00390000012559 #21 ENSGT00390000008679 ENSGT00940000155426 #22 ENSGT00530000063981.b #23 ENSGT00390000006218 #24 ENSGT00940000160574 #25 ENSGT00440000034605.f.a #26 ENSGT00940000154234.a #29 ENSGT00940000155379 #30 ENSGT00530000063822.a.a #31 ENSGT00940000156046 #32 ENSGT00390000001680 #33 ENSGT00940000159310 #34 ENSGT00940000160980 #35 ENSGT00390000018100 #36 ENSGT00940000157661 ENSGT00390000009140.g ENSGT00940000153438.a Arctic ground squirrel MODERN SPECIES 10 ENSUPAG00010001329 ACCSL (ENSUPAG00010001299) C11orf96 (ENSUPAG00010001291) ALKBH3 (ENSUPAG00010001256) HSD17B12 (ENSUPAG00010001237) ENSUPAG00010001201 API5 (ENSUPAG00010001168) ENSUPAG00010001157 LRRC4C (ENSUPAG00010001136) IFTAP (ENSUPAG00010001086) #20 RAG2 (ENSUPAG00010001080) #21 RAG1 (ENSUPAG00010001077) TRAF6 (ENSUPAG00010001061) #22 PRR5L (ENSUPAG00010001016) #23 COMMD9 (ENSUPAG00010001008) #24 LDLRAD3 (ENSUPAG00010000987) #25 ENSUPAG00010000969 #26 PAMR1 (ENSUPAG00010000955) #29 SLC1A2 (ENSUPAG00010000901) #30 CD44 (ENSUPAG00010000106) #31 PDHX (ENSUPAG00010000084) #32 APIP (ENSUPAG00010000057) #33 EHF (ENSUPAG00010019516) #34 ELF5 (ENSUPAG00010019491) #35 CAT (ENSUPAG00010019472) #36 ABTB2 (ENSUPAG00010019465) NAT10 (ENSUPAG00010019438) CAPRIN1 (ENSUPAG00010019403) Squirrel MODERN SPECIES 133 IFTAP (ENSSTOG00000029068) #20 RAG2 (ENSSTOG00000012558) #21 RAG1 (ENSSTOG00000025584) TRAF6 (ENSSTOG00000007303) #22 PRR5L (ENSSTOG00000022180) #23 COMMD9 (ENSSTOG00000007267) #24 LDLRAD3 (ENSSTOG00000007228) #25 TRIM44 (ENSSTOG00000023760) #26 PAMR1 (ENSSTOG00000000826) #29 SLC1A2 (ENSSTOG00000000822) #30 ENSSTOG00000000813 #31 PDHX (ENSSTOG00000004403) #32 APIP (ENSSTOG00000004390) #33 ENSSTOG00000008622 #34 ELF5 (ENSSTOG00000008610) #35 CAT (ENSSTOG00000008595) #36 ABTB2 (ENSSTOG00000001839) ENSSTOG00000001817 CAPRIN1 (ENSSTOG00000006945) Eurasian red squirrel MODERN SPECIES 2 ALX4 (ENSSVLG00005017428) EXT2 (ENSSVLG00005017472) ACCS (ENSSVLG00005017673) ACCSL (ENSSVLG00005017862) C11orf96 (ENSSVLG00005018003) ALKBH3 (ENSSVLG00005018027) HSD17B12 (ENSSVLG00005018072) ENSSVLG00005018129 TTC17 (ENSSVLG00005018176) ENSSVLG00005018298 LRRC4C (ENSSVLG00005018979) ENSSVLG00005019010 ENSSVLG00005019047 #20 RAG2 (ENSSVLG00005019171) #21 RAG1 (ENSSVLG00005019195) TRAF6 (ENSSVLG00005019219) #22 PRR5L (ENSSVLG00005019340) #23 COMMD9 (ENSSVLG00005019522) #24 LDLRAD3 (ENSSVLG00005019672) #25 ENSSVLG00005019782 #26 ENSSVLG00005019851 FJX1 (ENSSVLG00005019889) #28 PAMR1 (ENSSVLG00005019988) #29 SLC1A2 (ENSSVLG00005020571) #30 CD44 (ENSSVLG00005021288) #31 PDHX (ENSSVLG00005021554) #32 APIP (ENSSVLG00005021719) #33 ENSSVLG00005021768 #34 ELF5 (ENSSVLG00005021853) #35 CAT (ENSSVLG00005022137) #36 ENSSVLG00005022214 Hystricomorpha ANCESTRAL SPECIES 16 ENSGT00390000017249 ENSGT00940000157667 ENSGT00940000158481 ENSGT00940000159662 ENSGT00940000156620 ENSGT00940000161101 ENSGT00390000016821 ENSGT00940000157226 ENSGT00940000154860 ENSGT00390000006196 ENSGT00390000010991.p.a ENSGT00940000157405 ENSGT00390000013149 #20 ENSGT00390000012559 #21 ENSGT00390000008679 ENSGT00940000155426 #22 ENSGT00530000063981.b #23 ENSGT00390000006218 #24 ENSGT00940000160574 #25 ENSGT00440000034605 #26 ENSGT00390000016768 #28 ENSGT00940000154234.a #29 ENSGT00940000155379 #30 ENSGT00530000063822.a.a #31 ENSGT00940000156046 #32 ENSGT00390000001680 #33 ENSGT00940000159310 #34 ENSGT00940000160980 #35 ENSGT00390000018100 #36 ENSGT00940000157661 ENSGT00390000009140 Hystricomorpha_a ANCESTRAL SPECIES 12 ENSGT00940000157667 ENSGT00940000158481 ENSGT00940000159662 ENSGT00940000156620 ENSGT00940000161101 ENSGT00390000016821 ENSGT00940000157226 ENSGT00940000154860 ENSGT00390000006196 ENSGT00390000010991.o ENSGT00940000155035.e.b ENSGT00940000157405 ENSGT00390000013149 #20 ENSGT00390000012559 #21 ENSGT00390000008679 ENSGT00940000155426 #22 ENSGT00530000063981.b #23 ENSGT00390000006218 #24 ENSGT00940000160574 #25 ENSGT00440000034605 #26 ENSGT00390000016768 #28 ENSGT00940000154234.a #29 ENSGT00940000155379 #30 ENSGT00530000063822.a.a #31 ENSGT00940000156046 #32 ENSGT00390000001680 #33 ENSGT00940000159310 #34 ENSGT00940000160980 #35 ENSGT00390000018100 #36 ENSGT00940000157661 ENSGT00390000009140 Hystricomorpha_b ANCESTRAL SPECIES 10 ENSGT00940000157667 ENSGT00940000158481 ENSGT00940000159662 ENSGT00940000156620 ENSGT00940000161101 ENSGT00390000016821 ENSGT00940000157226 ENSGT00940000154860 ENSGT00390000006196 ENSGT00390000010991.o ENSGT00940000155035.e.b ENSGT00940000157405 ENSGT00390000013149 #20 ENSGT00390000012559 #21 ENSGT00390000008679 ENSGT00940000155426 #22 ENSGT00530000063981.b #23 ENSGT00390000006218 #24 ENSGT00940000160574 #25 ENSGT00440000034605 #26 ENSGT00390000016768 #28 ENSGT00940000154234.a #29 ENSGT00940000155379 #30 ENSGT00530000063822.a.a #31 ENSGT00940000156046 #32 ENSGT00390000001680 #33 ENSGT00940000159310 #34 ENSGT00940000160980 #35 ENSGT00390000018100 #36 ENSGT00940000157661 ENSGT00390000009140 Long-tailed chinchilla MODERN SPECIES 129 CD82 (ENSCLAG00000013557) ALX4 (ENSCLAG00000013928) EXT2 (ENSCLAG00000014428) C11orf96 (ENSCLAG00000018096) ALKBH3 (ENSCLAG00000016579) HSD17B12 (ENSCLAG00000016216) TTC17 (ENSCLAG00000012857) API5 (ENSCLAG00000013707) ENSCLAG00000015133 LRRC4C (ENSCLAG00000015479) ENSCLAG00000013706 ENSCLAG00000017889 IFTAP (ENSCLAG00000016504) #20 RAG2 (ENSCLAG00000016493) #21 RAG1 (ENSCLAG00000015510) TRAF6 (ENSCLAG00000015588) #22 PRR5L (ENSCLAG00000015373) #23 COMMD9 (ENSCLAG00000014761) #24 LDLRAD3 (ENSCLAG00000013692) #25 TRIM44 (ENSCLAG00000014212) #26 FJX1 (ENSCLAG00000014978) #28 PAMR1 (ENSCLAG00000014744) #29 SLC1A2 (ENSCLAG00000014237) #30 ENSCLAG00000015376 #31 PDHX (ENSCLAG00000014466) #32 APIP (ENSCLAG00000014703) #33 EHF (ENSCLAG00000017235) #34 ELF5 (ENSCLAG00000013934) #35 CAT (ENSCLAG00000013690) #36 ABTB2 (ENSCLAG00000014834) NAT10 (ENSCLAG00000016692) Degu MODERN SPECIES 59 ENSODEG00000020538 C11orf96 (ENSODEG00000020497) ALKBH3 (ENSODEG00000017204) HSD17B12 (ENSODEG00000016636) ENSODEG00000016649 TTC17 (ENSODEG00000016728) ENSODEG00000016280 ENSODEG00000016521 ENSODEG00000020406 ENSODEG00000020370 LRRC4C (ENSODEG00000020475) ENSODEG00000020466 IFTAP (ENSODEG00000016540) #20 RAG2 (ENSODEG00000020447) #21 RAG1 (ENSODEG00000020338) TRAF6 (ENSODEG00000017071) #22 PRR5L (ENSODEG00000016913) #23 COMMD9 (ENSODEG00000017403) #24 LDLRAD3 (ENSODEG00000017384) #25 ENSODEG00000016381 #26 FJX1 (ENSODEG00000016768) #28 ENSODEG00000016254 PAMR1 (ENSODEG00000016795) #29 SLC1A2 (ENSODEG00000016926) #30 ENSODEG00000016446 #31 PDHX (ENSODEG00000016591) #32 ENSODEG00000016598 ENSODEG00000016570 #33 EHF (ENSODEG00000017375) #34 ELF5 (ENSODEG00000016572) #35 CAT (ENSODEG00000016770) #36 Guinea pig MODERN SPECIES 92 ENSCPOG00000020978 IFTAP (ENSCPOG00000012798) #20 RAG2 (ENSCPOG00000020441) #21 RAG1 (ENSCPOG00000004516) TRAF6 (ENSCPOG00000004507) #22 PRR5L (ENSCPOG00000030786) #23 COMMD9 (ENSCPOG00000010648) #24 LDLRAD3 (ENSCPOG00000035009) #25 TRIM44 (ENSCPOG00000011263) #26 FJX1 (ENSCPOG00000022249) #28 PAMR1 (ENSCPOG00000007812) #29 SLC1A2 (ENSCPOG00000007801) #30 CD44 (ENSCPOG00000007792) #31 PDHX (ENSCPOG00000003099) #32 APIP (ENSCPOG00000003097) #33 EHF (ENSCPOG00000012596) #34 ELF5 (ENSCPOG00000012593) #35 CAT (ENSCPOG00000012582) #36 ABTB2 (ENSCPOG00000020779) NAT10 (ENSCPOG00000015736) Naked mole-rat female MODERN SPECIES 14 ENSHGLG00000032198 ENSHGLG00000035834 ACCS (ENSHGLG00000018000) C11orf96 (ENSHGLG00000035452) ALKBH3 (ENSHGLG00000019437) HSD17B12 (ENSHGLG00000043869) TTC17 (ENSHGLG00000017796) ENSHGLG00000013322 ENSHGLG00000047607 LRRC4C (ENSHGLG00000042650) ENSHGLG00000041917 ENSHGLG00000044878 IFTAP (ENSHGLG00000007037) #20 RAG2 (ENSHGLG00000020564) #21 RAG1 (ENSHGLG00000020565) TRAF6 (ENSHGLG00000010513) #22 PRR5L (ENSHGLG00000006197) #23 COMMD9 (ENSHGLG00000039189) #24 LDLRAD3 (ENSHGLG00000009909) #25 ENSHGLG00000035280 TRIM44 (ENSHGLG00000006623) #26 FJX1 (ENSHGLG00000038500) #28 ENSHGLG00000038577 PAMR1 (ENSHGLG00000007733) #29 SLC1A2 (ENSHGLG00000010072) #30 CD44 (ENSHGLG00000011767) #31 ENSHGLG00000047526 ENSHGLG00000040571 ENSHGLG00000010978 #32 APIP (ENSHGLG00000011839) #33 EHF (ENSHGLG00000009758) #34 Lagomorpha ANCESTRAL SPECIES 4 ENSGT00940000157667 ENSGT00940000158481 ENSGT00940000159662 ENSGT00940000156620 ENSGT00940000161101 ENSGT00940000162841 ENSGT00390000016821 ENSGT00940000157226 ENSGT00940000154860 ENSGT00390000006196 ENSGT00390000010991 ENSGT00940000157405 ENSGT00390000013149 #20 ENSGT00390000012559 #21 ENSGT00390000008679 ENSGT00940000155426 #22 ENSGT00530000063981.b #23 ENSGT00390000006218 #24 ENSGT00940000160574 #25 ENSGT00440000034605 #26 ENSGT00390000016768 #28 ENSGT00940000154234.a #29 ENSGT00940000155379 #30 ENSGT00530000063822.a.a #31 ENSGT00940000156046 #32 ENSGT00390000001680 #33 ENSGT00940000159310 #34 ENSGT00940000160980 #35 ENSGT00390000018100 #36 ENSGT00940000157661 ENSGT00390000009140 Rabbit MODERN SPECIES API5 (ENSOCUG00000034334) ENSOCUG00000024568 ENSOCUG00000021849 ENSOCUG00000029420 ENSOCUG00000022894 ENSOCUG00000026202 ENSOCUG00000027982 LRRC4C (ENSOCUG00000017587) ENSOCUG00000028119 ENSOCUG00000031380 ENSOCUG00000028011 ENSOCUG00000038153 IFTAP (ENSOCUG00000006998) #20 RAG2 (ENSOCUG00000006995) #21 RAG1 (ENSOCUG00000006989) TRAF6 (ENSOCUG00000012011) #22 PRR5L (ENSOCUG00000012007) #23 COMMD9 (ENSOCUG00000015674) #24 LDLRAD3 (ENSOCUG00000026068) #25 TRIM44 (ENSOCUG00000003818) #26 FJX1 (ENSOCUG00000026770) #28 PAMR1 (ENSOCUG00000000721) #29 SLC1A2 (ENSOCUG00000000718) #30 CD44 (ENSOCUG00000000715) #31 PDHX (ENSOCUG00000008004) #32 APIP (ENSOCUG00000021141) #33 EHF (ENSOCUG00000010261) #34 ELF5 (ENSOCUG00000014207) #35 CAT (ENSOCUG00000014198) #36 ABTB2 (ENSOCUG00000001405) NAT10 (ENSOCUG00000001398) Pika MODERN SPECIES 1320 IFTAP (ENSOPRG00000017325) #20 RAG2 (ENSOPRG00000017324) #21 TRAF6 (ENSOPRG00000017321) #22 PRR5L (ENSOPRG00000017320) #23 Tree shrew MODERN SPECIES 4014 TRAF6 (ENSTBEG00000008291) #22 Marsupialia ANCESTRAL SPECIES 7 ENSGT00940000158481 ENSGT00940000159662 ENSGT00940000156620 ENSGT00940000161101 ENSGT00940000164760 ENSGT00390000016821 ENSGT00940000157226 ENSGT00940000154860 ENSGT00390000006196 ENSGT00390000010991 ENSGT00940000157405 ENSGT00940000153298.m.b.a.a.h.a ENSGT00390000013149.g.b #20 ENSGT00390000012559 #21 ENSGT00390000008679 ENSGT00940000155426 #22 ENSGT00530000063981.b #23 ENSGT00390000006218 #24 ENSGT00940000160574 #25 ENSGT00440000034605 #26 ENSGT00390000016768 #28 ENSGT00940000154234.a #29 ENSGT00940000155379 #30 ENSGT00530000063822.a.a #31 ENSGT00940000156046 #32 ENSGT00390000001680 #33 ENSGT00940000159310 #34 ENSGT00940000160980 #35 ENSGT00390000018100 #36 ENSGT00940000157661 ENSGT00390000009140 Opossum MODERN SPECIES 4 TTC17 (ENSMODG00000019858) API5 (ENSMODG00000019854) ENSMODG00000050454 ENSMODG00000048963 LRRC4C (ENSMODG00000024461) ENSMODG00000044338 ENSMODG00000024462 ENSMODG00000029605 ENSMODG00000027830 ENSMODG00000051556 ENSMODG00000046146 ENSMODG00000046213 ENSMODG00000019838 #20 RAG2 (ENSMODG00000024469) #21 RAG1 (ENSMODG00000024470) TRAF6 (ENSMODG00000019837) #22 PRR5L (ENSMODG00000019835) #23 COMMD9 (ENSMODG00000019834) #24 LDLRAD3 (ENSMODG00000019832) #25 FJX1 (ENSMODG00000024473) #28 PAMR1 (ENSMODG00000019829) #29 SLC1A2 (ENSMODG00000019823) #30 ENSMODG00000045292 #31 PDHX (ENSMODG00000010015) #32 APIP (ENSMODG00000009997) #33 EHF (ENSMODG00000009989) #34 ELF5 (ENSMODG00000009972) #35 CAT (ENSMODG00000009956) #36 ABTB2 (ENSMODG00000009912) NAT10 (ENSMODG00000009890) CAPRIN1 (ENSMODG00000009867) Marsupialia_b ANCESTRAL SPECIES 8 ENSGT00940000158481 ENSGT00940000159662 ENSGT00940000156620 ENSGT00940000161101 ENSGT00940000164760 ENSGT00390000016821 ENSGT00940000157226 ENSGT00940000154860 ENSGT00390000006196 ENSGT00390000010991 ENSGT00940000157405 ENSGT00940000153298.m.b.a.a.h.a ENSGT00390000013149.h #20 ENSGT00390000012559 #21 ENSGT00390000008679 ENSGT00940000155426 #22 ENSGT00530000063981.b #23 ENSGT00390000006218 #24 ENSGT00940000160574 #25 ENSGT00440000034605 #26 ENSGT00390000016768 #28 ENSGT00940000154234.a #29 ENSGT00940000155379 #30 ENSGT00530000063822.a.a #31 ENSGT00940000156046 #32 ENSGT00390000001680 #33 ENSGT00940000159310 #34 ENSGT00940000160980 #35 ENSGT00390000018100 #36 ENSGT00940000157661 ENSGT00390000009140 Diprotodontia ANCESTRAL SPECIES 46 ENSGT00940000158481 ENSGT00940000159662 ENSGT00940000156620 ENSGT00940000161101 ENSGT00940000164760 ENSGT00390000016821 ENSGT00940000157226 ENSGT00940000154860 ENSGT00390000006196 ENSGT00390000010991 ENSGT00940000157405 ENSGT00940000153298.m.b.a.a.h.a ENSGT00390000013149.g.a #20 ENSGT00390000012559 #21 ENSGT00390000008679 ENSGT00940000155426 #22 ENSGT00530000063981.b #23 ENSGT00390000006218 #24 ENSGT00940000160574 #25 ENSGT00440000034605 #26 ENSGT00390000016768 #28 ENSGT00940000154234.a #29 ENSGT00940000155379 #30 ENSGT00530000063822.a.a #31 ENSGT00940000156046 #32 ENSGT00390000001680 #33 ENSGT00940000159310 #34 ENSGT00940000160980 #35 ENSGT00390000018100 #36 ENSGT00940000157661 ENSGT00390000009140 Diprotodontia_a ANCESTRAL SPECIES 46 ENSGT00940000159662 ENSGT00940000156620 ENSGT00940000161101 ENSGT00940000164760 ENSGT00390000016821 ENSGT00940000157226 ENSGT00940000154860 ENSGT00390000006196 ENSGT00390000010991 ENSGT00940000157405 ENSGT00390000008099.`c.a ENSGT00940000153298.m.b.a.a.h.a ENSGT00390000013149.g.a #20 ENSGT00390000012559 #21 ENSGT00390000008679 ENSGT00940000155426 #22 ENSGT00530000063981.b #23 ENSGT00390000006218 #24 ENSGT00940000160574 #25 ENSGT00440000034605 #26 ENSGT00390000016768 #28 ENSGT00940000154234.a #29 ENSGT00940000155379 #30 ENSGT00530000063822.a.a #31 ENSGT00940000156046 #32 ENSGT00390000001680 #33 ENSGT00940000159310 #34 ENSGT00940000160980 #35 ENSGT00390000018100 #36 ENSGT00940000157661 ENSGT00390000009140 koala MODERN SPECIES 148 ENSPCIG00000014411 ENSPCIG00000007497 #20 RAG2 (ENSPCIG00000007496) #21 RAG1 (ENSPCIG00000007494) TRAF6 (ENSPCIG00000025154) #22 PRR5L (ENSPCIG00000031166) #23 COMMD9 (ENSPCIG00000025148) #24 LDLRAD3 (ENSPCIG00000025145) #25 ENSPCIG00000030886 #26 FJX1 (ENSPCIG00000013864) #28 PAMR1 (ENSPCIG00000036918) #29 ENSPCIG00000033347 #30 ENSPCIG00000001222 #30 ENSPCIG00000001108 #31 PDHX (ENSPCIG00000001071) #32 APIP (ENSPCIG00000001058) #33 EHF (ENSPCIG00000000856) #34 ELF5 (ENSPCIG00000019729) #35 CAT (ENSPCIG00000019730) #36 ABTB2 (ENSPCIG00000026315) Common wonbat MODERN SPECIES 1058 ACCS (ENSVURG00010011433) ENSVURG00010011462 C11orf96 (ENSVURG00010011478) ALKBH3 (ENSVURG00010011481) HSD17B12 (ENSVURG00010011495) TTC17 (ENSVURG00010011530) API5 (ENSVURG00010011565) LRRC4C (ENSVURG00010011660) ENSVURG00010011671 ENSVURG00010011681 ENSVURG00010011691 ENSVURG00010011704 ENSVURG00010011715 #20 RAG2 (ENSVURG00010011726) #21 RAG1 (ENSVURG00010011733) TRAF6 (ENSVURG00010011738) #22 PRR5L (ENSVURG00010011749) #23 COMMD9 (ENSVURG00010011757) #24 LDLRAD3 (ENSVURG00010011775) #25 FJX1 (ENSVURG00010011780) #28 PAMR1 (ENSVURG00010011784) #29 SLC1A2 (ENSVURG00010011805) #30 ENSVURG00010011839 #31 PDHX (ENSVURG00010011855) #32 APIP (ENSVURG00010011869) #33 EHF (ENSVURG00010011886) #34 ELF5 (ENSVURG00010011912) #35 CAT (ENSVURG00010011928) #36 ABTB2 (ENSVURG00010011975) NAT10 (ENSVURG00010012623) CAPRIN1 (ENSVURG00010012674) Tasmanian devil MODERN SPECIES 5 ENSSHAG00000021679 ENSSHAG00000000290 ALX4 (ENSSHAG00000030684) EXT2 (ENSSHAG00000025904) ACCS (ENSSHAG00000008665) ENSSHAG00000008476 ALKBH3 (ENSSHAG00000024968) HSD17B12 (ENSSHAG00000026618) TTC17 (ENSSHAG00000018903) ENSSHAG00000018895 LRRC4C (ENSSHAG00000015017) ENSSHAG00000032308 ENSSHAG00000024309 #20 RAG2 (ENSSHAG00000027759) #21 RAG1 (ENSSHAG00000030524) TRAF6 (ENSSHAG00000021499) #22 PRR5L (ENSSHAG00000027462) #23 COMMD9 (ENSSHAG00000013073) #24 LDLRAD3 (ENSSHAG00000030828) #25 ENSSHAG00000027936 #26 PAMR1 (ENSSHAG00000006602) #29 SLC1A2 (ENSSHAG00000003454) #30 ENSSHAG00000027755 #31 ENSSHAG00000021071 PDHX (ENSSHAG00000029847) #32 APIP (ENSSHAG00000011523) #33 EHF (ENSSHAG00000010046) #34 ELF5 (ENSSHAG00000025368) #35 CAT (ENSSHAG00000007671) #36 ABTB2 (ENSSHAG00000004178) NAT10 (ENSSHAG00000003443) Platypus MODERN SPECIES 14 TP53I11 (ENSOANG00000042889) TSPAN18 (ENSOANG00000038384) CD82 (ENSOANG00000042613) ALX4 (ENSOANG00000037260) EXT2 (ENSOANG00000003194) ACCS (ENSOANG00000040441) ENSOANG00000037961 ALKBH3 (ENSOANG00000009208) ENSOANG00000009210 TTC17 (ENSOANG00000009406) API5 (ENSOANG00000009405) LRRC4C (ENSOANG00000000566) ENSOANG00000011773 #20 RAG2 (ENSOANG00000011771) #21 RAG1 (ENSOANG00000046813) TRAF6 (ENSOANG00000011769) #22 PRR5L (ENSOANG00000011768) #23 ENSOANG00000011767 #24 LDLRAD3 (ENSOANG00000031345) #25 ENSOANG00000007388 #26 ENSOANG00000036464 FJX1 (ENSOANG00000044309) #28 PAMR1 (ENSOANG00000007389) #29 SLC1A2 (ENSOANG00000007391) #30 ENSOANG00000007392 #31 PDHX (ENSOANG00000007393) #32 APIP (ENSOANG00000007394) #33 EHF (ENSOANG00000007395) #34 ELF5 (ENSOANG00000007396) #35 CAT (ENSOANG00000007397) #36 ABTB2 (ENSOANG00000007399) Anura ANCESTRAL SPECIES 85 ENSGT00940000157405 ENSGT00940000175068 ENSGT00390000012559 #21 ENSGT00390000008679 ENSGT00940000155426 #22 ENSGT00530000063981.b #23 ENSGT00390000006218 #24 ENSGT00940000160574 #25 ENSGT00440000034605 #26 ENSGT00390000016768 #28 ENSGT00940000154234.a #29 ENSGT00940000155379 #30 ENSGT00530000063822.a.a #31 ENSGT00940000156046 #32 ENSGT00390000001680 #33 ENSGT00940000159310 #34 ENSGT00940000160980 #35 ENSGT00390000018100.e.a #36 ENSGT00390000018100.f #36 ENSGT00390000018100.e.b #36 Frog MODERN SPECIES 4 c11orf96 (ENSXETG00000035201) ENSXETG00000033705 accs (ENSXETG00000022231) syt13 (ENSXETG00000015639) SYT13 (ENSXETG00000036565) prdm11 (ENSXETG00000040979) ENSXETG00000042584 tp53i11 (ENSXETG00000042516) tspan18 (ENSXETG00000022236) cd82 (ENSXETG00000022237) alx4 (ENSXETG00000007545) ext2 (ENSXETG00000007546) iftap (ENSXETG00000032018) #20 rag2 (ENSXETG00000007547) #21 RAG1 (ENSXETG00000044054) traf6 (ENSXETG00000007549) #22 prr5l (ENSXETG00000031096) #23 commd9 (ENSXETG00000007551) #24 ldlrad3 (ENSXETG00000007552) #25 trim44 (ENSXETG00000007553) #26 ENSXETG00000047544 fjx1 (ENSXETG00000047230) #28 pamr1 (ENSXETG00000007554) #29 slc1a2 (ENSXETG00000007555) #30 cd44 (ENSXETG00000007556) #31 pdhx (ENSXETG00000007557) #32 apip (ENSXETG00000007558) #33 ehf (ENSXETG00000007559) #34 elf5 (ENSXETG00000007560) #35 cat.1 (ENSXETG00000007561) #36 cat.3 (ENSXETG00000048405) #36 Leishan spiny toad MODERN SPECIES 1 TOX3 (ENSLLEG00000008463) ENSLLEG00000008559 ENSLLEG00000008576 CHD9 (ENSLLEG00000008640) RBL2 (ENSLLEG00000009180) ENSLLEG00000009511 ENSLLEG00000009534 ENSLLEG00000009561 ENSLLEG00000009570 LRRC4C (ENSLLEG00000009590) ENSLLEG00000009607 RAG2 (ENSLLEG00000009665) #21 ENSLLEG00000009788 ENSLLEG00000010055 RAG1 (ENSLLEG00000010191) TRAF6 (ENSLLEG00000010210) #22 LDLRAD3 (ENSLLEG00000010313) #25 COMMD9 (ENSLLEG00000010716) #24 ENSLLEG00000010899 #26 FJX1 (ENSLLEG00000010928) #28 PAMR1 (ENSLLEG00000010981) #29 SLC1A2 (ENSLLEG00000011047) #30 ENSLLEG00000011426 ENSLLEG00000011445 #31 PDHX (ENSLLEG00000011523) #32 APIP (ENSLLEG00000011647) #33 EHF (ENSLLEG00000011712) #34 ELF5 (ENSLLEG00000011938) #35 ENSLLEG00000012598 #36 ENSLLEG00000013903 #36 ENSLLEG00000014425 #36 Coelacanth MODERN SPECIES 229 CD82 (ENSLACG00000017907) ALX4 (ENSLACG00000017583) EXT2 (ENSLACG00000017456) ENSLACG00000017441 ENSLACG00000017384 si:ch1073-281m9.1 (ENSLACG00000017284) si:ch1073-281m9.1 (ENSLACG00000017246) ALKBH3 (ENSLACG00000017208) HSD17B12 (ENSLACG00000016989) TTC17 (ENSLACG00000016656) API5 (ENSLACG00000016597) LRRC4C (ENSLACG00000013655) IFTAP (ENSLACG00000004777) #20 RAG2 (ENSLACG00000004709) #21 RAG1 (ENSLACG00000004406) TRAF6 (ENSLACG00000003168) #22 PRR5L (ENSLACG00000001838) #23 Actinopterygii ANCESTRAL SPECIES 276 ENSGT00940000157405 ENSGT00390000013149 #20 ENSGT00390000012559 #21 ENSGT00390000008679 ENSGT00940000164760 ENSGT00390000016821 ENSGT00940000157226 ENSGT00940000154860 ENSGT00390000006196 ENSGT00390000010991 ENSGT00940000155426 #22 ENSGT00530000063981.b #23 ENSGT00390000006218 #24 ENSGT00390000018100 #36 Neopterygii ANCESTRAL SPECIES 191 ENSGT00940000155379 #30 ENSGT00530000063822.a.a #31 ENSGT00940000156046 #32 ENSGT00390000001680 #33 ENSGT00940000159310 #34 ENSGT00940000157405 ENSGT00390000013149 #20 ENSGT00390000012559 #21 ENSGT00390000008679 ENSGT00940000164760 ENSGT00390000016821 ENSGT00940000157226 ENSGT00940000154860 ENSGT00390000006196 ENSGT00390000010991 ENSGT00940000155426 #22 ENSGT00530000063981.b #23 ENSGT00390000006218 #24 Osteoglossocephalai ANCESTRAL SPECIES 59 ENSGT00940000157405.c.a ENSGT00940000175068 ENSGT00390000012559 #21 ENSGT00390000008679 ENSGT00940000175024 ENSGT00940000164760 ENSGT00390000016821 ENSGT00940000157226 ENSGT00940000154860.a.b ENSGT01000000214788 ENSGT00390000001680 #33 ENSGT00940000157405.c.b ENSGT00940000154860.a.a ENSGT00390000006196 ENSGT00390000010991 ENSGT00940000155426 #22 ENSGT00530000063981.b #23 ENSGT00390000006218 #24 ENSGT00530000063576.A ENSGT00390000007126 ENSGT00950000182857.a.a.b.b ENSGT00950000182857.a.b ENSGT00390000018100 #36 ENSGT00940000158627 ENSGT00940000157591 ENSGT00940000158464 ENSGT00940000154996.a.b.a ENSGT00940000154091.a.b ENSGT00940000160162 ENSGT00510000047494 ENSGT00940000157447 Osteoglossiformes ANCESTRAL SPECIES 213 ENSGT00940000155379.g.a.b #30 ENSGT00530000063822.a.a #31 ENSGT00940000156046 #32 ENSGT00940000159310 #34 ENSGT00940000157405.c.a ENSGT00940000175068 ENSGT00390000012559 #21 ENSGT00390000008679 ENSGT00940000175024 ENSGT00940000164760 ENSGT00390000016821 ENSGT00940000157226 ENSGT00940000154860.a.b ENSGT00390000006196 ENSGT00390000010991.w ENSGT00940000155426 #22 ENSGT00390000002251 ENSGT00940000160588 P. kingsleyae DUPLICATION P. kingsleyae MODERN SPECIES 12 BRSK2 (ENSPKIG00000013692) ENSPKIG00000013662 ldha (ENSPKIG00000013627) ENSPKIG00000013539 hrasb (ENSPKIG00000013507) rassf7b (ENSPKIG00000013492) ascl1b (ENSPKIG00000013472) slc1a2a (ENSPKIG00000013432) #30 apip (ENSPKIG00000013406) #33 ENSPKIG00000013392 zgc:64002 (ENSPKIG00000013377) LRRC4C (ENSPKIG00000013366) HSD17B12 (ENSPKIG00000013315) ENSPKIG00000013292 ENSPKIG00000013285 ENSPKIG00000013261 #22 FCSK (ENSPKIG00000013172) trpm5 (ENSPKIG00000012994) cdkn1ca (ENSPKIG00000012930) kcnq1.1 (ENSPKIG00000012902) ENSPKIG00000012888 lingo1b (ENSPKIG00000012885) snx33 (ENSPKIG00000012874) sin3aa (ENSPKIG00000012808) CRABP1 (ENSPKIG00000012775) psma4 (ENSPKIG00000012736) OAZ2 (ENSPKIG00000012684) rbpms2b (ENSPKIG00000012634) AP3B2 (ENSPKIG00000012434) CPEB1 (ENSPKIG00000012302) SNX1 (ENSPKIG00000012253) P. kingsleyae MODERN SPECIES 38 PAMR1 (ENSPKIG00000000097) #29 SLC1A2 (ENSPKIG00000000071) #30 ENSPKIG00000022003 #31 pdhx (ENSPKIG00000021977) #32 ehf (ENSPKIG00000021956) #34 lrrc4ca (ENSPKIG00000021948) ENSPKIG00000021938 rag2 (ENSPKIG00000021925) #21 rag1 (ENSPKIG00000021898) ENSPKIG00000021875 ENSPKIG00000021855 alkbh3 (ENSPKIG00000021815) hsd17b12a (ENSPKIG00000021773) ttc17 (ENSPKIG00000021708) api5 (ENSPKIG00000021667) traf6 (ENSPKIG00000021640) #22 PRR5L (ENSPKIG00000021622) #23 commd9 (ENSPKIG00000021605) #24 ptdss2 (ENSPKIG00000021568) cdkn1ca (ENSPKIG00000021556) kcnq1.1 (ENSPKIG00000021526) ENSPKIG00000021495 ifitm5 (ENSPKIG00000021488) ENSPKIG00000021457 Asian bonytongue DUPLICATION Asian bonytongue MODERN SPECIES 2 BRSK2 (ENSSFOG00015011235) ldha (ENSSFOG00015011210) tsg101a (ENSSFOG00015011182) ENSSFOG00015011157 rassf7b (ENSSFOG00015027069) ENSSFOG00015026690 ENSSFOG00015025499 ldlrad3 (ENSSFOG00015026744) FJX1 (ENSSFOG00015032074) #28 ENSSFOG00015028363 slc1a2a (ENSSFOG00015011028) #30 ENSSFOG00015028482 #31 apip (ENSSFOG00015033345) #33 LRRC4C (ENSSFOG00015011001) hsd17b12b (ENSSFOG00015010984) ENSSFOG00015010926 #22 ENSSFOG00015010953 FCSK (ENSSFOG00015010882) trpm5 (ENSSFOG00015010837) cdkn1ca (ENSSFOG00015024372) ENSSFOG00015010788 ENSSFOG00015027106 lingo1b (ENSSFOG00015010766) snx33 (ENSSFOG00015010748) sin3aa (ENSSFOG00015010655) crabp1a (ENSSFOG00015010613) psma4 (ENSSFOG00015010581) OAZ2 (ENSSFOG00015010507) rbpms2b (ENSSFOG00015010476) AP3B2 (ENSSFOG00015010369) CPEB1 (ENSSFOG00015010287) Asian bonytongue MODERN SPECIES 20 PAMR1 (ENSSFOG00015003188) #29 SLC1A2 (ENSSFOG00015003213) #30 ENSSFOG00015030127 pdhx (ENSSFOG00015003249) #32 ehf (ENSSFOG00015003297) #34 lrrc4ca (ENSSFOG00015003324) ENSSFOG00015003335 rag2 (ENSSFOG00015003344) #21 rag1 (ENSSFOG00015003379) ENSSFOG00015003410 si:ch1073-281m9.1 (ENSSFOG00015028988) alkbh3 (ENSSFOG00015003566) hsd17b12a (ENSSFOG00015003574) ttc17 (ENSSFOG00015003612) api5 (ENSSFOG00015003750) traf6 (ENSSFOG00015003763) #22 PRR5L (ENSSFOG00015003782) #23 commd9 (ENSSFOG00015026165) #24 ptdss2 (ENSSFOG00015003833) ENSSFOG00015030833 kcnq1.1 (ENSSFOG00015003904) ENSSFOG00015003930 ifitm5 (ENSSFOG00015003948) ENSSFOG00015017073 ENSSFOG00015004002 PKP3 (ENSSFOG00015004009) sigirr (ENSSFOG00015004018) ANO9 (ENSSFOG00015004039) ANO5 (ENSSFOG00015004119) ENSSFOG00015026998 ENSSFOG00015004217 Clupeocephala ANCESTRAL SPECIES 366 ENSGT00940000154234.a.d #29 ENSGT00940000155379.g.a #30 ENSGT00390000001680 #33 ENSGT00940000157405.c.b ENSGT00940000154860.a.a ENSGT00390000006196 ENSGT00940000155426 #22 ENSGT00530000063981.b #23 ENSGT00940000160588 ENSGT00940000162677 ENSGT00940000161001 ENSGT00940000164990.d ENSGT00940000154996.a.b.b Euteleosteomorpha ANCESTRAL SPECIES 211 ENSGT00950000183093.B.a.b ENSGT00390000008184 ENSGT00940000156825 ENSGT00940000180696 ENSGT00940000154963 ENSGT00810000125439.A ENSGT00390000014757 ENSGT00940000158287 ENSGT00940000157089.B ENSGT00940000154234.a.d #29 ENSGT00940000155379.g.a #30 ENSGT00390000001680 #33 ENSGT00940000157405.c.b ENSGT00940000154860.a.a ENSGT00390000006196 ENSGT00940000155426 #22 ENSGT00940000160588 ENSGT00940000162677 ENSGT00940000161001 ENSGT00940000164990.d ENSGT00940000154996.a.b.b Protacanthopterygii ANCESTRAL SPECIES 101 ENSGT00940000154234.a.d #29 ENSGT00940000155379.g.a #30 ENSGT00390000001680 #33 ENSGT00940000157405.c.b ENSGT00940000154860.a.a ENSGT00390000006196 ENSGT00940000166194.a.a ENSGT00940000155426 #22 ENSGT00940000160588 ENSGT00940000162677 ENSGT00940000161001 ENSGT00940000164990.d ENSGT00940000154996.a.b.b ENSGT01060000248595.b.a.b.a.n.b ENSGT00390000006347.a ENSGT00940000160333 ENSGT00390000017790 ENSGT00940000155568 ENSGT00940000163723.A.e ENSGT00940000163723.A.f.b ENSGT01050000244900.a.a.b.eb ENSGT00940000158280 ENSGT00550000074952 Salmoninae ANCESTRAL SPECIES 1 ENSGT00940000153499.b.b.d.a.b.h.a ENSGT00940000158146.a ENSGT00940000161262.a.n ENSGT00390000013315 ENSGT00940000159073 ENSGT00940000157089.A.a ENSGT00940000154234.a.d #29 ENSGT00940000155379.g.a #30 ENSGT00390000001680 #33 ENSGT00940000157405.c.b ENSGT00940000154860.a.a.d ENSGT00390000006196.l ENSGT00390000006196.k.b ENSGT00940000166194.a.b ENSGT00940000166194.a.a ENSGT00940000155426 #22 ENSGT00940000160588 ENSGT00940000162677.qc ENSGT00940000161001 ENSGT00940000164990.d ENSGT00940000154996.a.b.b ENSGT01060000248595.b.a.b.a.n.b ENSGT00390000006347.a ENSGT00940000160333 ENSGT00390000017790 ENSGT00940000155568 ENSGT00940000163723.A.e ENSGT00940000163723.A.f.b ENSGT01050000244900.a.a.b.eb.h ENSGT00940000158280.l ENSGT00550000074952 Salmoninae_a ANCESTRAL SPECIES 85 ENSGT00940000154234.a.d #29 ENSGT00940000155379.g.a #30 ENSGT00390000001680 #33 ENSGT00940000157405.c.b ENSGT00990000209089.b ENSGT00940000154860.a.a.d ENSGT00390000006196.l ENSGT00390000006196.k.b ENSGT00940000166194.a.b ENSGT00940000166194.a.a ENSGT00940000155426 #22 ENSGT00940000160588.b ENSGT00940000162677.qc.b ENSGT00940000160588.a ENSGT00940000162677.qc.a ENSGT00940000161001 ENSGT00940000164990.d ENSGT00940000154996.a.b.b ENSGT01060000248595.b.a.b.a.n.b ENSGT00390000006347.a.g.b ENSGT00390000006347.a.g.a ENSGT00940000160333 ENSGT00390000017790 ENSGT00940000155568 ENSGT00940000163723.A.e ENSGT00940000163723.A.f.b Salmo ANCESTRAL SPECIES 138 ENSGT00940000154234.a.d #29 ENSGT00940000155379.g.a #30 ENSGT00390000001680 #33 ENSGT00940000157405.c.b ENSGT00990000209089.b ENSGT00940000154860.a.a.d ENSGT00390000006196.k.a ENSGT00940000166194.a.b.a ENSGT00940000166194.a.a ENSGT00940000155426 #22 ENSGT00940000160588.a ENSGT00940000162677.qc.b ENSGT00940000162677.qc.a.a ENSGT00940000161001 ENSGT00940000164990.d.f ENSGT00940000154996.a.b.b.c ENSGT01060000248595.b.a.b.a.n.b.e ENSGT00390000006347.a.g.b ENSGT00940000160333.f ENSGT00390000017790 ENSGT00940000155568.b ENSGT00940000163723.A.e.b ENSGT00940000163723.A.f.b.m.a ENSGT01050000244900.a.a.b.eb.g.a.b ENSGT00940000158280.k River trout DUPLICATION River trout MODERN SPECIES 3 ENSSTUG00000010812 CHST1 (ENSSTUG00000010805) ENSSTUG00000010798 slc35c1 (ENSSTUG00000010792) CRY2 (ENSSTUG00000010660) PAMR1 (ENSSTUG00000010619) #29 slc1a2a (ENSSTUG00000010538) #30 apip (ENSSTUG00000010508) #33 LRRC4C (ENSSTUG00000010505) ENSSTUG00000010500 hsd17b12b (ENSSTUG00000010485) ttc17 (ENSSTUG00000009896) ENSSTUG00000009872 ENSSTUG00000009839 ENSSTUG00000009812 traf6 (ENSSTUG00000009787) #22 trpm5 (ENSSTUG00000009687) ENSSTUG00000009677 ENSSTUG00000009667 kcnq1.1 (ENSSTUG00000009396) lingo1b (ENSSTUG00000009375) cpt1aa (ENSSTUG00000008905) cars1 (ENSSTUG00000007209) slc22a18 (ENSSTUG00000007145) pex16 (ENSSTUG00000007120) arfgap2 (ENSSTUG00000007061) ENSSTUG00000007041 ENSSTUG00000007012 ppfia1 (ENSSTUG00000004645) tmod2 (ENSSTUG00000004523) leo1 (ENSSTUG00000004341) River trout MODERN SPECIES 21 ENSSTUG00000013858 ENSSTUG00000013853 ENSSTUG00000013845 CHST1 (ENSSTUG00000013841) slc35c1 (ENSSTUG00000013839) CRY2 (ENSSTUG00000013635) PAMR1 (ENSSTUG00000013601) #29 slc1a2a (ENSSTUG00000013581) #30 apip (ENSSTUG00000013552) #33 LRRC4C (ENSSTUG00000013543) ENSSTUG00000013540 ENSSTUG00000013536 hsd17b12b (ENSSTUG00000013517) ttc17 (ENSSTUG00000012270) ENSSTUG00000012217 traf6 (ENSSTUG00000012206) #22 trpm5 (ENSSTUG00000012144) ENSSTUG00000012134 ENSSTUG00000012121 ENSSTUG00000012108 kcnq1.1 (ENSSTUG00000011950) lingo1b (ENSSTUG00000011940) cpt1aa (ENSSTUG00000011258) cars1 (ENSSTUG00000009452) slc22a18 (ENSSTUG00000009401) pex16 (ENSSTUG00000009372) arfgap2 (ENSSTUG00000009272) ENSSTUG00000009257 ENSSTUG00000009241 ENSSTUG00000009226 ENSSTUG00000009200 Atlantic salmon MODERN SPECIES 18 smad6a (ENSSSAG00000088892) chst1 (ENSSSAG00000004800) ENSSSAG00000085173 ENSSSAG00000120164 ENSSSAG00000114794 ENSSSAG00000112050 CRY2 (ENSSSAG00000069768) ENSSSAG00000062807 #29 slc1a2a (ENSSSAG00000009050) #30 apip (ENSSSAG00000042232) #33 ENSSSAG00000091855 ENSSSAG00000040431 hsd17b12b (ENSSSAG00000040461) ttc17 (ENSSSAG00000040540) ENSSSAG00000076731 ENSSSAG00000009850 #22 ENSSSAG00000101306 ENSSSAG00000069803 CDN1C (ENSSSAG00000069801) ENSSSAG00000069738 ENSSSAG00000069709 ENSSSAG00000062476 ENSSSAG00000065651 ENSSSAG00000009760 ENSSSAG00000105914 ENSSSAG00000086985 ENSSSAG00000076581 ENSSSAG00000005625 ENSSSAG00000055518 tmod2 (ENSSSAG00000060985) ENSSSAG00000116709 Oncorhynchus ANCESTRAL SPECIES ENSGT00950000182965.a.b.b.b ENSGT00940000158440.g.a.g.b ENSGT00940000157505 ENSGT00940000153499.b.b.d.a.a ENSGT00940000158146.a.c.b ENSGT00940000161262.a.n ENSGT00390000013315 ENSGT00940000154234.a.d #29 ENSGT00940000155379.g.a #30 ENSGT00390000001680 #33 ENSGT00940000157405.c.b ENSGT00990000209089.b ENSGT00940000154860.a.a.d ENSGT00390000006196.l ENSGT00940000166194.a.a ENSGT00940000155426 #22 ENSGT00940000160588.b ENSGT00940000162677.qc.b ENSGT00940000160588.a ENSGT00940000162677.qc.a ENSGT00940000161001 ENSGT00940000154996.a.b.b ENSGT01060000248595.b.a.b.a.n.b ENSGT00390000006347.a.g.b ENSGT00940000160333 ENSGT00390000017790 ENSGT01080000257714.b ENSGT00940000155568 ENSGT00940000163723.A.e ENSGT00940000163723.A.f.b ENSGT01050000244900.a.a.b.eb.h Rainbow trout MODERN SPECIES 27 skor1a (ENSOMYG00000057349) map2k5 (ENSOMYG00000064462) ENSOMYG00000002807 smad6a (ENSOMYG00000074703) ENSOMYG00000068058 ENSOMYG00000002832 ENSOMYG00000069110 #29 slc1a2a (ENSOMYG00000002858) #30 apip (ENSOMYG00000071183) #33 ENSOMYG00000061757 ENSOMYG00000030570 ENSOMYG00000002918 hsd17b12b (ENSOMYG00000054352) ttc17 (ENSOMYG00000066781) ENSOMYG00000065809 ENSOMYG00000040541 #22 trpm5 (ENSOMYG00000057858) ENSOMYG00000040589 ENSOMYG00000067852 ENSOMYG00000062919 ENSOMYG00000048968 ENSOMYG00000004278 ENSOMYG00000004018 ENSOMYG00000077260 ENSOMYG00000004192 ENSOMYG00000003351 ENSOMYG00000003441 ENSOMYG00000053221 ENSOMYG00000004444 ENSOMYG00000073125 ENSOMYG00000024703 Oncorhynchus_a ANCESTRAL SPECIES 220 ENSGT00990000209089.b ENSGT00940000154860.a.a.d ENSGT00390000006196.l ENSGT00940000166194.a.a ENSGT00940000155426 #22 ENSGT00940000160588.a ENSGT00940000162677.qc.a ENSGT00940000161001 ENSGT00940000154996.a.b.b ENSGT01060000248595.b.a.b.a.n.b ENSGT00390000006347.a.g.b Chinook salmon MODERN SPECIES 3033 traf6 (ENSOTSG00005035432) #22 Coho salmon DUPLICATION Coho salmon MODERN SPECIES 555 ENSOKIG00005042453 traf6 (ENSOKIG00005042587) #22 TRPM5 (ENSOKIG00005042627) ENSOKIG00005042742 ENSOKIG00005042767 Coho salmon MODERN SPECIES 32 mapk6 (ENSOKIG00005037802) LEO1 (ENSOKIG00005037738) ENSOKIG00005037624 ENSOKIG00005036557 ENSOKIG00005036436 ENSOKIG00005036401 arfgap2 (ENSOKIG00005036260) ENSOKIG00005036243 PEX16 (ENSOKIG00005036181) ENSOKIG00005036102 cars1 (ENSOKIG00005034427) ENSOKIG00005034291 ENSOKIG00005034266 ttc17 (ENSOKIG00005034171) ENSOKIG00005034040 TRAF6 (ENSOKIG00005034012) #22 trpm5 (ENSOKIG00005033333) ENSOKIG00005033243 ENSOKIG00005033109 lingo1b (ENSOKIG00005033071) ENSOKIG00005031839 CHST1 (ENSOKIG00005031722) slc35c1 (ENSOKIG00005031717) PAMR1 (ENSOKIG00005031706) #29 slc1a2a (ENSOKIG00005031245) #30 apip (ENSOKIG00005031096) #33 LRRC4C (ENSOKIG00005031076) ENSOKIG00005031071 smad6a (ENSOKIG00005031063) ENSOKIG00005031026 SMAD3 (ENSOKIG00005030867) Huchen MODERN SPECIES 1651 ENSHHUG00000039320 LRRC4C (ENSHHUG00000039317) ENSHHUG00000039314 hsd17b12b (ENSHHUG00000039291) ttc17 (ENSHHUG00000039279) ENSHHUG00000039276 ENSHHUG00000039264 traf6 (ENSHHUG00000039223) #22 Northern pike MODERN SPECIES 1 map2k5 (ENSELUG00000021260) SMAD3 (ENSELUG00000021087) smad6a (ENSELUG00000021062) CHST1 (ENSELUG00000021051) slc35c1 (ENSELUG00000021039) CRY2 (ENSELUG00000021019) PAMR1 (ENSELUG00000020976) #29 slc1a2a (ENSELUG00000000921) #30 apip (ENSELUG00000020924) #33 LRRC4C (ENSELUG00000031309) ENSELUG00000020858 ENSELUG00000020845 ttc17 (ENSELUG00000020818) ENSELUG00000030198 ENSELUG00000020662 traf6 (ENSELUG00000020636) #22 trpm5 (ENSELUG00000020566) ENSELUG00000020526 kcnq1.1 (ENSELUG00000020500) lingo1b (ENSELUG00000020454) cpt1aa (ENSELUG00000020423) cars1 (ENSELUG00000020347) slc22a18 (ENSELUG00000020269) pex16 (ENSELUG00000020226) arfgap2 (ENSELUG00000020186) ENSELUG00000020152 ENSELUG00000020067 ENSELUG00000032105 ppfia1 (ENSELUG00000020126) tmod2 (ENSELUG00000020038) leo1 (ENSELUG00000019983) Acanthomorphata ANCESTRAL SPECIES 79 ENSGT00940000157530.b.b ENSGT00940000161262.a ENSGT00390000013315 ENSGT00940000154234.a.d #29 ENSGT00940000155379.g.a #30 ENSGT00390000001680 #33 ENSGT00940000157405.c.b ENSGT00940000154860.a.a ENSGT00390000006196 ENSGT00940000155426 #22 ENSGT00940000160588 ENSGT00940000167611 ENSGT00940000164990.d ENSGT00940000154996.a.b.b ENSGT00390000013180 ENSGT00860000135092 ENSGT00390000007623.c ENSGT00530000063582.b ENSGT00940000156718 ENSGT00940000159068 ENSGT00940000156586 ENSGT00940000172097 ENSGT00940000162248 ENSGT00940000157760.g.a ENSGT00390000018587.e Euacanthomorphacea ANCESTRAL SPECIES 46 ENSGT00940000157530.b.b ENSGT00940000161262.a ENSGT00390000013315 ENSGT00940000154234.a.d #29 ENSGT00940000155379.g.a #30 ENSGT00390000001680 #33 ENSGT00940000157405.c.b ENSGT00940000176990 ENSGT00940000154860.a.a ENSGT00390000006196 ENSGT00940000155426 #22 ENSGT00940000160588 ENSGT00940000167611 ENSGT00940000164990.d ENSGT00940000154996.a.b.b ENSGT00390000013180 ENSGT00860000135092 ENSGT00390000007623.c ENSGT00530000063582.b ENSGT00940000156718 ENSGT00940000159068 ENSGT00940000156586 ENSGT00940000172097 ENSGT00940000162248 ENSGT00940000157760.g.a ENSGT00390000018587.e Percomorphaceae ANCESTRAL SPECIES 15 ENSGT00940000154963 ENSGT00810000125439.A ENSGT00940000158287 ENSGT00940000157089.B ENSGT00940000157530.b.a ENSGT00940000157530.b.b ENSGT00940000161262.a ENSGT00390000013315 ENSGT00940000154234.a.d #29 ENSGT00940000155379.g.a #30 ENSGT00390000001680 #33 ENSGT00940000157405.c.b ENSGT00940000176990 ENSGT00940000154860.a.a ENSGT00390000006196 ENSGT00940000155426 #22 ENSGT00940000160588 ENSGT00940000167611 ENSGT00940000164990.d ENSGT00940000154996.a.b.b ENSGT00390000013180 ENSGT00860000135092 ENSGT00390000007623.c ENSGT00530000063582.b ENSGT00940000156718 ENSGT00940000159068 ENSGT00940000156586 ENSGT00940000172097 ENSGT00940000162248 ENSGT00940000157760.g.a ENSGT00390000018587.e Percomorphaceae_B ANCESTRAL SPECIES 12 ENSGT00940000157089.B ENSGT00940000163916 ENSGT00960000187709 ENSGT00940000157530.b.a ENSGT00940000157530.b.b ENSGT00940000161262.a ENSGT00390000013315 ENSGT00940000154234.a.d #29 ENSGT00940000155379.g.a #30 ENSGT00530000068132 ENSGT00390000001680 #33 ENSGT00940000157405.c.b ENSGT00940000176990 ENSGT00940000154860.a.a ENSGT00390000006196 ENSGT00940000155426 #22 ENSGT00940000160588 ENSGT00940000167611 ENSGT00940000164990.d ENSGT00940000154996.a.b.b ENSGT00390000013180 ENSGT00860000135092 ENSGT00390000007623.c ENSGT00530000063582.b ENSGT00940000156718 ENSGT00940000159068 ENSGT00940000156586 ENSGT00940000172097 ENSGT00940000162248 ENSGT00940000157760.g.a ENSGT00390000018587.e Ovalentaria ANCESTRAL SPECIES 17 ENSGT00950000182858.C.f ENSGT00940000157089.B ENSGT00940000163916 ENSGT00940000157530.b.a ENSGT00940000157530.b.b ENSGT00940000161262.a ENSGT00390000013315 ENSGT00940000154234.a.d #29 ENSGT00940000155379.g.a #30 ENSGT00530000068132 ENSGT00390000001680 #33 ENSGT00940000157405.c.b ENSGT00940000176990 ENSGT00940000154860.a.a ENSGT00390000006196 ENSGT00940000155426 #22 ENSGT00940000160588 ENSGT00940000167611 ENSGT00940000164990.d ENSGT00940000154996.a.b.b ENSGT00390000013180 ENSGT00860000135092 ENSGT00390000007623.c ENSGT00530000063582.b ENSGT00940000156718 ENSGT00940000159068 ENSGT00940000156586 ENSGT00940000172097 ENSGT00940000162248 ENSGT00940000157760.g.a ENSGT00390000018587.e Atherinomorphae ANCESTRAL SPECIES 8 ENSGT00940000154963 ENSGT00940000163467.a.b.b.a.b ENSGT00940000158287 ENSGT00950000182858.C.f ENSGT00940000157089.B ENSGT00940000157530.b.b ENSGT00940000161262.a ENSGT00390000013315 ENSGT00940000155379.g.a #30 ENSGT00530000068132 ENSGT00390000001680 #33 ENSGT00940000157405.c.b ENSGT00940000176990 ENSGT00940000154860.a.a ENSGT00390000006196 ENSGT00940000155426 #22 ENSGT00940000160588 ENSGT00940000167611 ENSGT00940000164990.d ENSGT00940000154996.a.b.b ENSGT00390000013180 ENSGT00860000135092 ENSGT00390000007623.c ENSGT00530000063582.b ENSGT00940000156718 ENSGT00940000159068 ENSGT00940000156586 ENSGT00940000172097 ENSGT00940000162248 ENSGT00940000157760.g.a ENSGT00390000018587.e Cyprinodontiformes ANCESTRAL SPECIES 9 ENSGT00940000154963 ENSGT00940000163467.a.b.b.a.b ENSGT00940000158287 ENSGT00950000182858.C.f ENSGT00940000157089.B ENSGT00940000157530.b.b ENSGT00940000161262.a ENSGT00390000013315 ENSGT00940000155379.g.a #30 ENSGT00530000068132 ENSGT00390000001680 #33 ENSGT00940000157405.c.b ENSGT00940000176990 ENSGT00940000154860.a.a ENSGT00390000006196 ENSGT00940000155426 #22 ENSGT00940000160588 ENSGT00940000167611 ENSGT00940000164990.d ENSGT00940000154996.a.b.b ENSGT00390000013180 ENSGT00860000135092 ENSGT00390000007623.c ENSGT00530000063582.b ENSGT00940000156718 ENSGT00940000159068 ENSGT00940000156586 ENSGT00940000172097 ENSGT00940000162248 ENSGT00940000157760.g.a ENSGT00390000018587.e Aplocheiloidei ANCESTRAL SPECIES 39 ENSGT00940000156825 ENSGT00940000154963 ENSGT00940000163467.a.b.b.a.b ENSGT00940000158287 ENSGT00950000182858.C.f ENSGT00940000157089.B ENSGT00940000157530.b.b ENSGT00940000161262.a ENSGT00390000013315 ENSGT00940000155379.g.a #30 ENSGT00390000001680 #33 ENSGT00940000157405.c.b ENSGT00940000176990 ENSGT00940000154860.a.a ENSGT00390000006196 ENSGT00940000155426 #22 ENSGT00940000160588 ENSGT00940000167611 ENSGT00940000164990.d ENSGT00940000154996.a.b.b ENSGT00390000013180 ENSGT00860000135092 ENSGT00390000007623.c ENSGT00530000063582.b ENSGT00940000156718 ENSGT00940000159068 ENSGT00940000156586 ENSGT00940000172097 ENSGT00940000162248 ENSGT00940000157760.g.a ENSGT00390000018587.e Mangrove rivulus MODERN SPECIES 28 sim1a (ENSKMAG00000003860) ENSKMAG00000003833 cyb5r4 (ENSKMAG00000003821) lrp4 (ENSKMAG00000003642) ENSKMAG00000003582 MAPK8IP1 (ENSKMAG00000003560) ENSKMAG00000003542 chst1 (ENSKMAG00000003525) slc35c1 (ENSKMAG00000003507) slc1a2a (ENSKMAG00000003466) #30 apip (ENSKMAG00000003435) #33 LRRC4C (ENSKMAG00000003421) ENSKMAG00000003407 hsd17b12b (ENSKMAG00000003337) ttc17 (ENSKMAG00000003201) traf6 (ENSKMAG00000003166) #22 trpm5 (ENSKMAG00000003109) ENSKMAG00000003094 kcnq1.1 (ENSKMAG00000003034) ENSKMAG00000003018 ENSKMAG00000002993 ENSKMAG00000002982 lingo1b (ENSKMAG00000002973) ENSKMAG00000002957 luzp2 (ENSKMAG00000002863) ENSKMAG00000002846 bbox1 (ENSKMAG00000002813) MADD (ENSKMAG00000002728) nr1h3 (ENSKMAG00000002680) arl14ep (ENSKMAG00000002666) ENSKMAG00000002597 Turquoise killifish MODERN SPECIES 1618 AP1M1 (ENSNFUG00015005455) KLF2 (ENSNFUG00015005428) ENSNFUG00015005127 ENSNFUG00015005017 rx2 (ENSNFUG00015005000) cplx4c (ENSNFUG00015004995) ENSNFUG00015004989 ENSNFUG00015004784 ATCAYB (ENSNFUG00015004751) nmrk2 (ENSNFUG00015004742) loxl5b (ENSNFUG00015004712) ENSNFUG00015024992 HSD17B12B (ENSNFUG00015024988) ttc17 (ENSNFUG00015024960) ENSNFUG00015024948 TRAF6 (ENSNFUG00015024945) #22 trpm5 (ENSNFUG00015024937) insra (ENSNFUG00015024774) ARHGEF18A (ENSNFUG00015024732) sppl2 (ENSNFUG00015024709) ENSNFUG00015024696 CIB3 (ENSNFUG00015024692) admp (ENSNFUG00015024691) pnhd (ENSNFUG00015024690) ENSNFUG00015024665 ENSNFUG00015024663 RANBP3 (ENSNFUG00015024656) ENSNFUG00015024655 ENSNFUG00015024653 ptprfb (ENSNFUG00015020795) ENSNFUG00015020630 Cyprinodontoidei ANCESTRAL SPECIES 6 ENSGT00810000125439.A ENSGT00940000163467.a.b.b.a.b ENSGT00940000158287 ENSGT00950000182858.C.f ENSGT00940000157089.B ENSGT00940000157530.b.b ENSGT00940000161262.a ENSGT00390000013315 ENSGT00940000155379.g.a #30 ENSGT00530000068132 ENSGT00390000001680 #33 ENSGT00940000157405.c.b ENSGT00940000176990 ENSGT00940000154860.a.a ENSGT00390000006196 ENSGT00940000155426 #22 ENSGT00940000160588 ENSGT00940000167611 ENSGT00940000164990.d ENSGT00940000154996.a.b.b ENSGT00390000013180 ENSGT00860000135092 ENSGT00390000007623.c ENSGT00530000063582.b ENSGT00940000156718 ENSGT00940000159068 ENSGT00940000156586 ENSGT00940000172097 ENSGT00940000162248 ENSGT00940000157760.g.a ENSGT00390000018587.e NAME_4 ANCESTRAL SPECIES 66 ENSGT00940000154963 ENSGT00810000125439.A.ac.b ENSGT00940000163467.a.b.b.a.b ENSGT00940000158287 ENSGT00950000182858.C.f ENSGT00940000157089.B ENSGT00940000157530.b.b ENSGT00940000161262.a ENSGT00390000013315 ENSGT00940000155379.g.a #30 ENSGT00390000001680 #33 ENSGT00940000157405.c.b ENSGT00940000176990 ENSGT00940000154860.a.a ENSGT00390000006196 ENSGT00940000155426 #22 ENSGT00940000160588 ENSGT00940000167611 ENSGT00940000164990.d ENSGT00940000154996.a.b.b ENSGT00390000013180 ENSGT00860000135092 ENSGT00390000007623.c ENSGT00530000063582.b ENSGT00940000156718 ENSGT00940000159068 ENSGT00940000156586 ENSGT00940000172097 ENSGT00940000162248 ENSGT00940000157760.g.a ENSGT00390000018587.e Mummichog MODERN SPECIES 244 slc35c1 (ENSFHEG00000011310) slc1a2a (ENSFHEG00000011363) #30 apip (ENSFHEG00000000812) #33 LRRC4C (ENSFHEG00000011409) ENSFHEG00000011431 hsd17b12b (ENSFHEG00000011438) ttc17 (ENSFHEG00000011455) traf6 (ENSFHEG00000011482) #22 trpm5 (ENSFHEG00000011546) ENSFHEG00000011558 kcnq1.1 (ENSFHEG00000011674) lingo1b (ENSFHEG00000011694) luzp2 (ENSFHEG00000011735) Sheepshead minnow MODERN SPECIES 980 ttc17 (ENSCVAG00000015566) traf6 (ENSCVAG00000015572) #22 trpm5 (ENSCVAG00000015677) ENSCVAG00000015704 kcnq1.1 (ENSCVAG00000015733) lingo1b (ENSCVAG00000015736) Poeciliinae ANCESTRAL SPECIES 13 ENSGT00810000125439.A ENSGT00940000163467.a.b.b.a.b ENSGT00940000158287 ENSGT00950000182858.C.f ENSGT00940000157089.B ENSGT00940000157530.b.b ENSGT00940000161262.a ENSGT00390000013315 ENSGT00940000155379.g.a #30 ENSGT00530000068132 ENSGT00390000001680 #33 ENSGT00940000157405.c.b ENSGT00940000176990 ENSGT00940000154860.a.a ENSGT00390000006196 ENSGT00940000155426 #22 ENSGT00940000160588 ENSGT00940000167611 ENSGT00940000164990.d ENSGT00940000154996.a.b.b ENSGT00390000013180 ENSGT00860000135092 ENSGT00390000007623.c ENSGT00530000063582.b ENSGT00940000156718 ENSGT00940000159068 ENSGT00940000156586 ENSGT00940000172097 ENSGT00940000162248 ENSGT00940000157760.g.a ENSGT00390000018587.e Poecilia ANCESTRAL SPECIES 4 ENSGT00810000125439.A ENSGT00940000163467.a.b.b.a.b ENSGT00940000158287 ENSGT00950000182858.C.f ENSGT00940000157089.B ENSGT00940000157530.b.b ENSGT00940000161262.a ENSGT00390000013315 ENSGT00940000155379.g.a #30 ENSGT00530000068132 ENSGT00390000001680 #33 ENSGT00940000157405.c.b ENSGT00940000176990 ENSGT00940000154860.a.a ENSGT00390000006196 ENSGT00940000155426 #22 ENSGT00940000160588 ENSGT00940000167611 ENSGT00940000164990.d ENSGT00940000154996.a.b.b ENSGT00390000013180 ENSGT00860000135092 ENSGT00390000007623.c ENSGT00530000063582.b ENSGT00940000156718 ENSGT00940000159068 ENSGT00940000156586 ENSGT00940000172097 ENSGT00940000162248 ENSGT00940000157760.g.a ENSGT00390000018587.e NAME_6 ANCESTRAL SPECIES 307 ENSGT00950000182858.C.f ENSGT00940000157089.B ENSGT00940000157530.b.b ENSGT00940000161262.a ENSGT00390000013315 ENSGT00940000155379.g.a #30 ENSGT00530000068132 ENSGT00390000001680 #33 ENSGT00940000157405.c.b ENSGT00940000176990 ENSGT00940000154860.a.a ENSGT00390000006196 ENSGT00940000155426 #22 ENSGT00940000160588 ENSGT00940000164990.d.c Sailfin molly MODERN SPECIES 1713 ttc17 (ENSPLAG00000014234) traf6 (ENSPLAG00000000558) #22 trpm5 (ENSPLAG00000014295) ENSPLAG00000014303 kcnq1.1 (ENSPLAG00000014439) Amazon molly MODERN SPECIES 606 ENSPFOG00000024165 ENSPFOG00000019360 chst1 (ENSPFOG00000020573) slc35c1 (ENSPFOG00000019356) slc1a2a (ENSPFOG00000019354) #30 ENSPFOG00000022069 apip (ENSPFOG00000019349) #33 LRRC4C (ENSPFOG00000020572) hsd17b12b (ENSPFOG00000019340) ttc17 (ENSPFOG00000019326) traf6 (ENSPFOG00000019321) #22 trpm5 (ENSPFOG00000019301) ENSPFOG00000019287 kcnq1.1 (ENSPFOG00000019285) Guppy MODERN SPECIES 455 esrp2 (ENSPREG00000002991) ENSPREG00000003091 si:dkey-148a17.5 (ENSPREG00000003095) AMFR (ENSPREG00000003111) styx (ENSPREG00000003194) gnpnat1 (ENSPREG00000003239) MDGA1 (ENSPREG00000003270) chst1 (ENSPREG00000003312) slc35c1 (ENSPREG00000003324) slc1a2a (ENSPREG00000003339) #30 apip (ENSPREG00000003396) #33 LRRC4C (ENSPREG00000003410) ENSPREG00000003415 hsd17b12b (ENSPREG00000003427) ttc17 (ENSPREG00000003490) traf6 (ENSPREG00000003542) #22 trpm5 (ENSPREG00000003582) ENSPREG00000003653 kcnq1.1 (ENSPREG00000003681) lingo1b (ENSPREG00000003732) luzp2 (ENSPREG00000003748) MADD (ENSPREG00000003870) ENSPREG00000004220 fibinb (ENSPREG00000004231) bbox1 (ENSPREG00000004239) nr1h3 (ENSPREG00000004255) arl14ep (ENSPREG00000004287) ENSPREG00000004298 KCNA4 (ENSPREG00000004305) cd151l (ENSPREG00000004320) ENSPREG00000004367 Platyfish MODERN SPECIES 18 prmt3 (ENSXMAG00000010154) slc6a5 (ENSXMAG00000010152) NELL1 (ENSXMAG00000001374) ENSXMAG00000023927 lrp4 (ENSXMAG00000001380) MAPK8IP1 (ENSXMAG00000027053) ENSXMAG00000001456 chst1 (ENSXMAG00000020315) slc35c1 (ENSXMAG00000001466) slc1a2a (ENSXMAG00000001471) #30 apip (ENSXMAG00000001487) #33 LRRC4C (ENSXMAG00000019680) ENSXMAG00000023283 hsd17b12b (ENSXMAG00000011880) ttc17 (ENSXMAG00000011837) traf6 (ENSXMAG00000011827) #22 trpm5 (ENSXMAG00000011779) ENSXMAG00000022786 kcnq1.1 (ENSXMAG00000011736) lingo1b (ENSXMAG00000011734) luzp2 (ENSXMAG00000025139) ENSXMAG00000021427 fibinb (ENSXMAG00000020083) bbox1 (ENSXMAG00000000010) MADD (ENSXMAG00000000012) nr1h3 (ENSXMAG00000000014) arl14ep (ENSXMAG00000000016) ENSXMAG00000025767 KCNA4 (ENSXMAG00000000018) cd151l (ENSXMAG00000000019) TMEM138 (ENSXMAG00000026015) Oryzias ANCESTRAL SPECIES 13 ENSGT00940000156825 ENSGT00940000154963 ENSGT00810000125439.A ENSGT00940000158287 ENSGT00950000182858.C.f ENSGT00940000157089.B ENSGT00940000157530.b.b ENSGT00940000161262.a ENSGT00390000013315 ENSGT00940000155379.g.a.d #30 ENSGT00390000001680 #33 ENSGT00940000157405.c.b ENSGT00940000176990 ENSGT00940000154860.a.a ENSGT00390000006196 ENSGT00940000155426 #22 ENSGT00940000160588 ENSGT00940000164990.d ENSGT00940000154996.a.b.b ENSGT00390000013180 ENSGT00860000135092 ENSGT00390000007623.c ENSGT00530000063582.b ENSGT00940000156718 ENSGT00940000159068 ENSGT00940000156586 ENSGT00940000172097 ENSGT00940000162248 ENSGT00940000157760.g.a ENSGT00390000018587.e ENSGT00390000013319 Oryzias_a ANCESTRAL SPECIES 6 ENSGT00950000183093.B.a.b ENSGT00390000008184 ENSGT00940000156825 ENSGT00940000154963 ENSGT00950000182858.C.f.i.b ENSGT00940000157089.B ENSGT00940000157530.b.b ENSGT00940000161262.a ENSGT00390000013315 ENSGT00940000155379.g.a.c #30 ENSGT00390000001680 #33 ENSGT00940000157405.c.b ENSGT00940000176990 ENSGT00940000154860.a.a ENSGT00390000006196 ENSGT00940000155426 #22 ENSGT00940000160588 ENSGT00940000164990.d ENSGT00940000154996.a.b.b ENSGT00390000013180 ENSGT00860000135092 ENSGT00390000007623.c ENSGT00530000063582.b ENSGT00940000156718 ENSGT00940000159068 ENSGT00940000156586 ENSGT00940000172097 ENSGT00940000162248 ENSGT00940000157760.g.a ENSGT00390000018587.e ENSGT00390000013319 Japanese Medaka HdrR MODERN SPECIES 17 ENSORLG00000023015 ENSORLG00000029669 ENSORLG00000000893 ENSORLG00000000925 chst1 (ENSORLG00000000946) slc35c1 (ENSORLG00000024413) slc1a2a (ENSORLG00000000964) #30 ENSORLG00000030529 apip (ENSORLG00000000982) #33 ENSORLG00000030542 LRRC4C (ENSORLG00000000988) ENSORLG00000029427 ENSORLG00000026513 hsd17b12b (ENSORLG00000001004) ttc17 (ENSORLG00000001038) traf6 (ENSORLG00000001046) #22 trpm5 (ENSORLG00000001106) ENSORLG00000001115 kcnq1.1 (ENSORLG00000001120) ENSORLG00000001128 luzp2 (ENSORLG00000025458) ENSORLG00000023806 ENSORLG00000026667 bbox1 (ENSORLG00000001150) MADD (ENSORLG00000001259) nr1h3 (ENSORLG00000001286) arl14ep (ENSORLG00000029047) fshb (ENSORLG00000029237) KCNA4 (ENSORLG00000001296) ENSORLG00000023656 ENSORLG00000001305 Chinese medaka MODERN SPECIES 592 apip (ENSOSIG00000006885) #33 LRRC4C (ENSOSIG00000006884) ENSOSIG00000006882 hsd17b12b (ENSOSIG00000006876) ttc17 (ENSOSIG00000006011) traf6 (ENSOSIG00000006004) #22 trpm5 (ENSOSIG00000006003) ENSOSIG00000006001 kcnq1.1 (ENSOSIG00000006000) ENSOSIG00000005997 lingo1b (ENSOSIG00000005996) luzp2 (ENSOSIG00000005994) ENSOSIG00000005993 fibinb (ENSOSIG00000005991) bbox1 (ENSOSIG00000005657) MADD (ENSOSIG00000005342) nr1h3 (ENSOSIG00000005235) KCNA4 (ENSOSIG00000005234) ENSOSIG00000005233 ENSOSIG00000005232 TMEM138 (ENSOSIG00000005231) Oryzias_b ANCESTRAL SPECIES 5 ENSGT00940000154963 ENSGT00810000125439.A ENSGT00940000158287 ENSGT00950000182858.C.f.h ENSGT00950000182858.C.f.g ENSGT00940000157089.B ENSGT00940000157530.b.b ENSGT00940000161262.a ENSGT00390000013315 ENSGT00940000155379.g.a.d #30 ENSGT00390000001680 #33 ENSGT00940000157405.c.b ENSGT00940000176990 ENSGT00940000154860.a.a ENSGT00390000006196 ENSGT00940000155426 #22 ENSGT00940000160588 ENSGT00940000164990.d ENSGT00940000154996.a.b.b ENSGT00390000013180 ENSGT00860000135092 ENSGT00390000007623.c ENSGT00530000063582.b ENSGT00940000156718 ENSGT00940000159068 ENSGT00940000156586 ENSGT00940000172097 ENSGT00940000162248 ENSGT00940000157760.g.a ENSGT00390000018587.e ENSGT00390000013319 Indian medaka MODERN SPECIES 26 ENSOMEG00000004172 gjb9a (ENSOMEG00000004186) marcksl1a (ENSOMEG00000004195) bsdc1 (ENSOMEG00000004206) olig4 (ENSOMEG00000004214) FNDC5 (ENSOMEG00000004225) CACNG4 (ENSOMEG00000004240) chst1 (ENSOMEG00000004247) slc35c1 (ENSOMEG00000004263) slc1a2a (ENSOMEG00000004288) #30 apip (ENSOMEG00000004323) #33 LRRC4C (ENSOMEG00000004334) ENSOMEG00000000101 hsd17b12b (ENSOMEG00000004391) ttc17 (ENSOMEG00000004476) traf6 (ENSOMEG00000004508) #22 ENSOMEG00000004518 trpm5 (ENSOMEG00000004578) hpca (ENSOMEG00000004619) ENSOMEG00000004635 zgc:91944 (ENSOMEG00000004690) khdrbs1b (ENSOMEG00000004739) ENSOMEG00000004764 kcnq1.1 (ENSOMEG00000004792) lingo1b (ENSOMEG00000004809) luzp2 (ENSOMEG00000004829) bbs1 (ENSOMEG00000004844) MFAP4 (ENSOMEG00000004882) bbs1 (ENSOMEG00000004906) ENSOMEG00000005018 ENSOMEG00000005060 Javanese ricefish MODERN SPECIES 17 ENSOJAG00000015638 MAPK8IP1 (ENSOJAG00000015651) ENSOJAG00000015665 chst1 (ENSOJAG00000015677) ENSOJAG00000015688 ENSOJAG00000015714 slc35c1 (ENSOJAG00000015726) ENSOJAG00000015820 #30 apip (ENSOJAG00000016902) #33 ENSOJAG00000000068 LRRC4C (ENSOJAG00000000089) ENSOJAG00000000128 hsd17b12b (ENSOJAG00000000159) ENSOJAG00000000172 ttc17 (ENSOJAG00000000240) traf6 (ENSOJAG00000000283) #22 trpm5 (ENSOJAG00000000332) ENSOJAG00000000367 kcnq1.1 (ENSOJAG00000000373) lingo1b (ENSOJAG00000000390) luzp2 (ENSOJAG00000000423) ENSOJAG00000000435 ENSOJAG00000000439 fibinb (ENSOJAG00000000443) bbox1 (ENSOJAG00000000450) MADD (ENSOJAG00000000482) nr1h3 (ENSOJAG00000000605) arl14ep (ENSOJAG00000000662) ENSOJAG00000000666 KCNA4 (ENSOJAG00000000674) cd151l (ENSOJAG00000000679) Ovalentaria_B ANCESTRAL SPECIES 10 ENSGT00940000158287 ENSGT00950000182858.C.f ENSGT00940000157089.B ENSGT00940000163916 ENSGT00940000157530.b.a ENSGT00940000157530.b.b ENSGT00940000161262.a ENSGT00390000013315 ENSGT00940000154234.a.d #29 ENSGT00940000155379.g.a #30 ENSGT00390000001680 #33 ENSGT00940000157405.c.b ENSGT00940000176990 ENSGT00940000154860.a.a ENSGT00390000006196 ENSGT00940000155426 #22 ENSGT00940000160588 ENSGT00940000167611 ENSGT00940000164990.d ENSGT00940000154996.a.b.b ENSGT00390000013180 ENSGT00860000135092 ENSGT00390000007623.c ENSGT00530000063582.b ENSGT00940000156718 ENSGT00940000159068 ENSGT00940000156586 ENSGT00940000172097 ENSGT00940000162248 ENSGT00940000157760.g.a ENSGT00390000018587.e Pomacentridae ANCESTRAL SPECIES 15 ENSGT00940000163467.a.b.b.a.b ENSGT00940000158287 ENSGT00950000182858.C.f ENSGT00940000157089.B ENSGT00940000157530.b.a ENSGT00940000157530.b.b.b ENSGT00940000161262.a ENSGT00390000013315 ENSGT00940000154234.a.d #29 ENSGT00940000155379.g.a #30 ENSGT00390000001680 #33 ENSGT00940000157405.c.b ENSGT00940000176990 ENSGT00940000154860.a.a ENSGT00390000006196 ENSGT00940000155426 #22 ENSGT00940000160588 ENSGT00940000167611 ENSGT00940000164990.d ENSGT00940000154996.a.b.b ENSGT00390000013180 ENSGT00860000135092 ENSGT00390000007623.c ENSGT00530000063582.b.e ENSGT00940000156718 ENSGT00940000159068 ENSGT00940000156586 ENSGT00940000158152.b ENSGT00940000162248 ENSGT00940000157760.g.a ENSGT00390000018587.e Pomacentridae_A ANCESTRAL SPECIES 66 ENSGT00940000163467.a.b.b.a.b ENSGT00940000158287 ENSGT00950000182858.C.f ENSGT00940000157089.B ENSGT00940000157530.b.a ENSGT00940000157530.b.b.b ENSGT00940000161262.a ENSGT00390000013315 ENSGT00940000154234.a.d #29 ENSGT00940000155379.g.a #30 ENSGT00390000001680 #33 ENSGT00940000157405.c.b ENSGT00940000176990 ENSGT00940000154860.a.a ENSGT00390000006196 ENSGT00940000155426 #22 ENSGT00940000160588 ENSGT00940000167611 ENSGT00940000164990.d ENSGT00940000154996.a.b.b ENSGT00390000013180 ENSGT00860000135092 ENSGT00390000007623.c ENSGT00530000063582.b.e ENSGT00940000156718 ENSGT00940000159068 ENSGT00940000156586 ENSGT00940000158152.b ENSGT00940000162248 ENSGT00940000157760.g.a ENSGT00390000018587.e Amphiprion ANCESTRAL SPECIES 42 ENSGT00940000163467.a.b.b.a.b ENSGT00940000177592.b.a.a ENSGT00940000158287 ENSGT00950000182858.C.f ENSGT00940000157089.B ENSGT00940000157530.b.b.b ENSGT00940000161262.a ENSGT00390000013315 ENSGT00940000154234.a.d #29 ENSGT00940000155379.g.a #30 ENSGT00390000001680 #33 ENSGT00940000157405.c.b ENSGT00940000176990 ENSGT00940000154860.a.a ENSGT00390000006196 ENSGT00940000155426 #22 ENSGT00940000160588 ENSGT00940000167611 ENSGT00940000164990.d ENSGT00390000013180 ENSGT00860000135092 ENSGT00390000007623.c ENSGT00530000063582.b.e ENSGT00940000156718 ENSGT00940000159068 ENSGT00940000156586 ENSGT00940000158152.b ENSGT00940000162248 ENSGT00940000157760.g.a ENSGT00390000018587.e ENSGT00390000013319 Clown anemonefish MODERN SPECIES 1135 ENSAOCG00000019425 hsd17b12b (ENSAOCG00000019398) ttc17 (ENSAOCG00000019333) traf6 (ENSAOCG00000001376) #22 ENSAOCG00000001373 Orange clownfish MODERN SPECIES lrp4 (ENSAPEG00000000128) A3GALT2 (ENSAPEG00000000127) MAPK8IP1 (ENSAPEG00000000126) ENSAPEG00000000125 ENSAPEG00000000124 ENSAPEG00000000123 chst1 (ENSAPEG00000000122) slc35c1 (ENSAPEG00000000121) ENSAPEG00000000120 #29 slc1a2a (ENSAPEG00000000119) #30 apip (ENSAPEG00000000118) #33 LRRC4C (ENSAPEG00000000117) ENSAPEG00000000116 hsd17b12b (ENSAPEG00000000115) ttc17 (ENSAPEG00000000113) traf6 (ENSAPEG00000000112) #22 ENSAPEG00000000111 trpm5 (ENSAPEG00000000110) ENSAPEG00000000109 kcnq1.1 (ENSAPEG00000000108) ENSAPEG00000000107 lingo1b (ENSAPEG00000000106) ENSAPEG00000000105 luzp2 (ENSAPEG00000000104) ENSAPEG00000000103 fibinb (ENSAPEG00000000102) bbox1 (ENSAPEG00000000101) MADD (ENSAPEG00000000100) nr1h3 (ENSAPEG00000000099) arl14ep (ENSAPEG00000000098) KCNA4 (ENSAPEG00000000097) Spiny chromis MODERN SPECIES 679 ENSAPOG00000006170 ttc17 (ENSAPOG00000006275) traf6 (ENSAPOG00000006353) #22 trpm5 (ENSAPOG00000006515) ENSAPOG00000006533 kcnq1.1 (ENSAPOG00000006596) Bicolor damselfish DUPLICATION Bicolor damselfish MODERN SPECIES 1285 LRRC4C (ENSSPAG00000016336) ENSSPAG00000016322 hsd17b12b (ENSSPAG00000016296) ttc17 (ENSSPAG00000016175) traf6 (ENSSPAG00000016127) #22 Bicolor damselfish MODERN SPECIES 763 ttc17 (ENSSPAG00000009823) traf6 (ENSSPAG00000009883) #22 trpm5 (ENSSPAG00000009917) ENSSPAG00000009961 ENSSPAG00000009972 kcnq1.1 (ENSSPAG00000009991) lingo1b (ENSSPAG00000010035) luzp2 (ENSSPAG00000010045) Cichlidae ANCESTRAL SPECIES 11 ENSGT00940000163467.a.b.b.a.b ENSGT00940000158287 ENSGT00950000182858.C.f ENSGT00940000157089.B ENSGT00940000163916 ENSGT00940000157530.b.b ENSGT00940000161262.a ENSGT00390000013315 ENSGT00940000154234.a.d #29 ENSGT00940000155379.g.a #30 ENSGT00390000001680 #33 ENSGT00940000157405.c.b ENSGT00940000176990 ENSGT00940000154860.a.a ENSGT00390000006196 ENSGT00940000155426 #22 ENSGT00940000160588 ENSGT00940000167611 ENSGT00940000164990.d ENSGT00940000154996.a.b.b ENSGT00390000013180 ENSGT00860000135092 ENSGT00390000007623.c ENSGT00530000063582.b ENSGT00940000156718 ENSGT00940000159068 ENSGT00940000156586 ENSGT00940000172097 ENSGT00940000162248 ENSGT00940000157760.g.a ENSGT00390000018587.e Pseudocrenilabrinae ANCESTRAL SPECIES 13 ENSGT00940000158287 ENSGT00950000182858.C.f.m.b ENSGT00950000182858.C.f.n ENSGT00940000157089.B ENSGT00940000163916 ENSGT00940000157530.b.b ENSGT00940000161262.a ENSGT00390000013315 ENSGT00940000154234.a.d #29 ENSGT00940000155379.g.a #30 ENSGT00390000001680 #33 ENSGT00940000157405.c.b ENSGT00940000176990 ENSGT00940000154860.a.a ENSGT00390000006196 ENSGT00940000155426 #22 ENSGT00940000160588 ENSGT00940000167611 ENSGT00940000164990.d ENSGT00940000154996.a.b.b ENSGT00390000013180 ENSGT00860000135092 ENSGT00390000007623.c ENSGT00530000063582.b ENSGT00940000156718 ENSGT00940000159068 ENSGT00940000156586 ENSGT00940000172097 ENSGT00940000162248 ENSGT00940000157760.g.a ENSGT00390000018587.e Pseudocrenilabrinae_A ANCESTRAL SPECIES 13 ENSGT00940000158287 ENSGT00950000182858.C.f.m.b ENSGT00950000182858.C.f.m.a ENSGT00940000157089.B ENSGT00940000163916 ENSGT00940000157530.b.b ENSGT00940000161262.a ENSGT00390000013315 ENSGT00940000154234.a.d #29 ENSGT00940000155379.g.a #30 ENSGT00390000001680 #33 ENSGT00940000157405.c.b ENSGT00940000176990 ENSGT00940000154860.a.a ENSGT00390000006196 ENSGT00940000155426 #22 ENSGT00940000160588 ENSGT00940000167611 ENSGT00940000164990.d ENSGT00940000154996.a.b.b ENSGT00390000013180 ENSGT00860000135092 ENSGT00390000007623.c ENSGT00530000063582.b ENSGT00940000156718 ENSGT00940000159068 ENSGT00940000156586 ENSGT00940000172097 ENSGT00940000162248 ENSGT00940000157760.g.a ENSGT00390000018587.e Haplochromini ANCESTRAL SPECIES 11 ENSGT00940000158287 ENSGT00950000182858.C.f.m.b ENSGT00950000182858.C.f.n ENSGT00940000157089.B ENSGT00940000163916 ENSGT00940000157530.b.b ENSGT00940000161262.a ENSGT00390000013315 ENSGT00940000154234.a.d #29 ENSGT00940000155379.g.a #30 ENSGT00390000001680 #33 ENSGT00940000157405.c.b ENSGT00940000176990 ENSGT00940000154860.a.a ENSGT00390000006196 ENSGT00940000155426 #22 ENSGT00940000160588 ENSGT00940000167611 ENSGT00940000164990.d ENSGT00940000154996.a.b.b ENSGT00390000013180 ENSGT00860000135092 ENSGT00390000007623.c ENSGT00530000063582.b ENSGT00940000156718 ENSGT00940000159068 ENSGT00940000156586 ENSGT00940000172097 ENSGT00940000162248 ENSGT00940000157760.g.a ENSGT00390000018587.e Burton s mouthbrooder MODERN SPECIES 391 ENSHBUG00000007176 slc1a2a (ENSHBUG00000007185) #30 apip (ENSHBUG00000007203) #33 ENSHBUG00000007216 LRRC4C (ENSHBUG00000007219) ENSHBUG00000007226 hsd17b12b (ENSHBUG00000007896) ttc17 (ENSHBUG00000008044) traf6 (ENSHBUG00000008059) #22 trpm5 (ENSHBUG00000008166) ENSHBUG00000008179 kcnq1.1 (ENSHBUG00000008214) lingo1b (ENSHBUG00000008222) luzp2 (ENSHBUG00000008237) ENSHBUG00000008247 fibinb (ENSHBUG00000008262) bbox1 (ENSHBUG00000008274) MADD (ENSHBUG00000008503) nr1h3 (ENSHBUG00000008539) arl14ep (ENSHBUG00000008563) ENSHBUG00000008579 KCNA4 (ENSHBUG00000008596) cd151l (ENSHBUG00000008679) TMEM138 (ENSHBUG00000008700) Haplochromini_A ANCESTRAL SPECIES 10 ENSGT00950000182858.C.f.m.b ENSGT00950000182858.C.f.n ENSGT00940000157089.B ENSGT00940000163916 ENSGT00940000157530.b.b ENSGT00940000161262.a ENSGT00940000179349 ENSGT00390000013315 ENSGT00940000154234.a.d #29 ENSGT00940000155379.g.a #30 ENSGT00390000001680 #33 ENSGT00940000157405.c.b ENSGT00940000176990 ENSGT00940000154860.a.a ENSGT00390000006196 ENSGT00940000155426 #22 ENSGT00940000160588 ENSGT00940000167611 ENSGT00940000164990.d ENSGT00940000154996.a.b.b ENSGT00390000013180 ENSGT00860000135092 ENSGT00940000180992 ENSGT00390000007623.c ENSGT00530000063582.b ENSGT00940000156718 ENSGT00940000159068 ENSGT00940000156586 ENSGT00940000172097 ENSGT00940000162248 ENSGT00940000157760.g.a P. nyererei MODERN SPECIES 546 slc35c1 (ENSPNYG00000001761) PAMR1 (ENSPNYG00000001783) #29 slc1a2a (ENSPNYG00000001824) #30 apip (ENSPNYG00000001867) #33 LRRC4C (ENSPNYG00000001889) ENSPNYG00000001904 hsd17b12b (ENSPNYG00000001922) ttc17 (ENSPNYG00000002006) traf6 (ENSPNYG00000002103) #22 trpm5 (ENSPNYG00000002122) ENSPNYG00000002195 ENSPNYG00000002213 kcnq1.1 (ENSPNYG00000002237) lingo1b (ENSPNYG00000002331) luzp2 (ENSPNYG00000002347) Haplochromini_B ANCESTRAL SPECIES 3 ENSGT00940000158287 ENSGT00950000182858.C.f.n ENSGT00940000157089.B ENSGT00940000163916 ENSGT00940000157530.b.b ENSGT00940000161262.a ENSGT00940000179349 ENSGT00390000013315 ENSGT00940000154234.a.d #29 ENSGT00940000155379.g.a #30 ENSGT00390000001680 #33 ENSGT00940000157405.c.b ENSGT00940000176990 ENSGT00940000154860.a.a ENSGT00390000006196 ENSGT00940000155426 #22 ENSGT00940000160588 ENSGT00940000167611 ENSGT00940000164990.d ENSGT00940000154996.a.b.b ENSGT00390000013180 ENSGT00860000135092 ENSGT00940000180992 ENSGT00390000007623.c ENSGT00530000063582.b ENSGT00940000156718 ENSGT00940000159068 ENSGT00940000156586 ENSGT00940000172097 ENSGT00940000162248 ENSGT00940000157760.g.a Eastern happy MODERN SPECIES ENSACLG00000010836 ENSACLG00000010839 ENSACLG00000010847 chst1 (ENSACLG00000010864) ENSACLG00000010871 ENSACLG00000010898 slc35c1 (ENSACLG00000010925) PAMR1 (ENSACLG00000010941) #29 slc1a2a (ENSACLG00000010975) #30 apip (ENSACLG00000011019) #33 LRRC4C (ENSACLG00000011030) ENSACLG00000011151 hsd17b12b (ENSACLG00000011156) ENSACLG00000011193 ttc17 (ENSACLG00000011214) traf6 (ENSACLG00000011257) #22 trpm5 (ENSACLG00000011284) ENSACLG00000011306 kcnq1.1 (ENSACLG00000011722) lingo1b (ENSACLG00000011740) luzp2 (ENSACLG00000011852) ENSACLG00000011896 ENSACLG00000011916 fibinb (ENSACLG00000011931) bbox1 (ENSACLG00000011987) MADD (ENSACLG00000012068) nr1h3 (ENSACLG00000012157) arl14ep (ENSACLG00000012213) ENSACLG00000012235 KCNA4 (ENSACLG00000012267) cd151l (ENSACLG00000012285) Zebra mbuna MODERN SPECIES 1091 ENSMZEG00005014251 MAPK8IP1 (ENSMZEG00005014229) ENSMZEG00005014220 ENSMZEG00005014211 ENSMZEG00005014203 chst1 (ENSMZEG00005014195) ENSMZEG00005014191 slc35c1 (ENSMZEG00005014185) PAMR1 (ENSMZEG00005014173) #29 slc1a2a (ENSMZEG00005014155) #30 apip (ENSMZEG00005014143) #33 LRRC4C (ENSMZEG00005014136) ENSMZEG00005014126 hsd17b12b (ENSMZEG00005014110) ttc17 (ENSMZEG00005014070) traf6 (ENSMZEG00005014045) #22 trpm5 (ENSMZEG00005014025) ENSMZEG00005014019 kcnq1.1 (ENSMZEG00005013995) lingo1b (ENSMZEG00005013989) luzp2 (ENSMZEG00005013982) ENSMZEG00005013963 ENSMZEG00005013960 fibinb (ENSMZEG00005013957) bbox1 (ENSMZEG00005013942) MADD (ENSMZEG00005013925) nr1h3 (ENSMZEG00005013900) arl14ep (ENSMZEG00005013884) ENSMZEG00005013876 KCNA4 (ENSMZEG00005013871) cd151l (ENSMZEG00005013865) Lyretail cichlid MODERN SPECIES 320 lrp4 (ENSNBRG00000018321) ENSNBRG00000018403 MAPK8IP1 (ENSNBRG00000018420) ENSNBRG00000018456 ENSNBRG00000018473 chst1 (ENSNBRG00000018513) ENSNBRG00000018522 slc35c1 (ENSNBRG00000018530) PAMR1 (ENSNBRG00000018544) #29 slc1a2a (ENSNBRG00000018584) #30 apip (ENSNBRG00000018631) #33 LRRC4C (ENSNBRG00000018764) ENSNBRG00000018783 hsd17b12b (ENSNBRG00000018801) ttc17 (ENSNBRG00000018886) traf6 (ENSNBRG00000018939) #22 trpm5 (ENSNBRG00000018973) ENSNBRG00000019035 kcnq1.1 (ENSNBRG00000019059) lingo1b (ENSNBRG00000019132) luzp2 (ENSNBRG00000019155) ENSNBRG00000019184 ENSNBRG00000019196 fibinb (ENSNBRG00000019208) bbox1 (ENSNBRG00000019224) MADD (ENSNBRG00000019280) nr1h3 (ENSNBRG00000019379) arl14ep (ENSNBRG00000019420) ENSNBRG00000019462 KCNA4 (ENSNBRG00000019490) cd151l (ENSNBRG00000019509) Nile tilapia MODERN SPECIES celf1 (ENSONIG00000008300) ENSONIG00000041355 A3GALT2 (ENSONIG00000027795) ENSONIG00000042626 MAPK8IP1 (ENSONIG00000036840) ENSONIG00000034018 ENSONIG00000005920 chst1 (ENSONIG00000020452) ENSONIG00000005915 #29 slc1a2a (ENSONIG00000005912) #30 hsd17b12b (ENSONIG00000042636) apip (ENSONIG00000005908) #33 LRRC4C (ENSONIG00000020451) ENSONIG00000036270 ttc17 (ENSONIG00000005886) traf6 (ENSONIG00000040460) #22 trpm5 (ENSONIG00000005867) ENSONIG00000034462 kcnq1.1 (ENSONIG00000005859) lingo1b (ENSONIG00000005857) luzp2 (ENSONIG00000034475) ENSONIG00000036464 ENSONIG00000023333 fibinb (ENSONIG00000020450) bbox1 (ENSONIG00000005854) MADD (ENSONIG00000005841) nr1h3 (ENSONIG00000005828) arl14ep (ENSONIG00000031018) fshb (ENSONIG00000005826) KCNA4 (ENSONIG00000005824) cd151l (ENSONIG00000005822) Midas cichlid MODERN SPECIES 1094 ENSACIG00000021540 ENSACIG00000021523 MAPK8IP1 (ENSACIG00000021491) ENSACIG00000021451 ENSACIG00000021353 chst1 (ENSACIG00000021348) slc35c1 (ENSACIG00000021337) PAMR1 (ENSACIG00000021308) #29 slc1a2a (ENSACIG00000021292) #30 apip (ENSACIG00000021283) #33 LRRC4C (ENSACIG00000021271) ENSACIG00000021259 ENSACIG00000021246 hsd17b12b (ENSACIG00000021230) ttc17 (ENSACIG00000021176) traf6 (ENSACIG00000021157) #22 trpm5 (ENSACIG00000021027) ENSACIG00000021007 kcnq1.1 (ENSACIG00000020978) lingo1b (ENSACIG00000020970) luzp2 (ENSACIG00000020949) ENSACIG00000020940 fibinb (ENSACIG00000020934) bbox1 (ENSACIG00000020912) MADD (ENSACIG00000020859) NR1H2 (ENSACIG00000020830) arl14ep (ENSACIG00000020818) ENSACIG00000020708 KCNA4 (ENSACIG00000020699) cd151l (ENSACIG00000020685) TMEM138 (ENSACIG00000020676) Percomorphaceae_C ANCESTRAL SPECIES 11 ENSGT00950000182858.C.f ENSGT00940000157089.B ENSGT00960000187709 ENSGT00940000157530.b.a ENSGT00940000157530.b.b ENSGT00940000161262.a ENSGT00390000013315 ENSGT00940000154234.a.d #29 ENSGT00940000155379.g.a #30 ENSGT00530000068132 ENSGT00390000001680 #33 ENSGT00940000157405.c.b ENSGT00940000176990 ENSGT00940000154860.a.a ENSGT00390000006196 ENSGT00940000155426 #22 ENSGT00940000160588 ENSGT00940000167611 ENSGT00940000164990.d ENSGT00940000154996.a.b.b ENSGT00390000013180 ENSGT00860000135092 ENSGT00390000007623.c ENSGT00530000063582.b ENSGT00940000156718 ENSGT00940000159068 ENSGT00940000156586 ENSGT00940000172097 ENSGT00940000162248 ENSGT00940000157760.g.a ENSGT00390000018587.e Eupercaria ANCESTRAL SPECIES 14 ENSGT00950000182858.C.f ENSGT00940000157089.B ENSGT00960000187709 ENSGT00940000157530.b.a ENSGT00940000157530.b.b ENSGT00940000161262.a ENSGT00390000013315 ENSGT00940000154234.a.d #29 ENSGT00940000155379.g.a #30 ENSGT00530000068132 ENSGT00390000001680 #33 ENSGT00940000157405.c.b ENSGT00940000176990 ENSGT00940000154860.a.a ENSGT00390000006196 ENSGT00940000155426 #22 ENSGT00940000160588 ENSGT00940000167611 ENSGT00940000164990.d ENSGT00940000154996.a.b.b ENSGT00390000013180 ENSGT00860000135092 ENSGT00390000007623.c ENSGT00530000063582.b ENSGT00940000156718 ENSGT00940000159068 ENSGT00940000156586 ENSGT00940000172097 ENSGT00940000162248 ENSGT00940000157760.g.a ENSGT00390000018587.e Tetraodontidae ANCESTRAL SPECIES 4 ENSGT00810000125439.A ENSGT00940000163467.a.b.b.a.b ENSGT00940000158287 ENSGT00950000182858.C.f ENSGT00940000157089.B ENSGT00940000157530.b.b ENSGT00940000161262.a ENSGT00390000013315 ENSGT00940000154234.a.d #29 ENSGT00940000155379.g.a #30 ENSGT00390000001680 #33 ENSGT00940000157405.c.b ENSGT00940000176990 ENSGT00940000154860.a.a ENSGT00390000006196 ENSGT00940000155426 #22 ENSGT00940000160588 ENSGT00940000167611 ENSGT00940000164990.d ENSGT00940000154996.a.b.b ENSGT00390000013180 ENSGT00860000135092 ENSGT00390000007623.c ENSGT00530000063582.b ENSGT00940000156718 ENSGT00940000159068 ENSGT00940000156586 ENSGT00940000158152.b ENSGT00940000162248 ENSGT00940000157760.g.a ENSGT00390000018587.e Fugu MODERN SPECIES 4 slc6a5 (ENSTRUG00000015944) NELL1 (ENSTRUG00000016017) ENSTRUG00000020682 ENSTRUG00000016170 MAPK8IP1 (ENSTRUG00000021709) ENSTRUG00000016184 chst1 (ENSTRUG00000016194) slc35c1 (ENSTRUG00000022396) ENSTRUG00000016200 #29 slc1a2a (ENSTRUG00000016239) #30 apip (ENSTRUG00000016253) #33 LRRC4C (ENSTRUG00000016255) ENSTRUG00000032668 hsd17b12b (ENSTRUG00000016257) ttc17 (ENSTRUG00000016281) traf6 (ENSTRUG00000016306) #22 trpm5 (ENSTRUG00000016316) ENSTRUG00000022458 kcnq1.1 (ENSTRUG00000016351) lingo1b (ENSTRUG00000016358) luzp2 (ENSTRUG00000025811) ENSTRUG00000024372 fibinb (ENSTRUG00000016362) bbox1 (ENSTRUG00000016364) MADD (ENSTRUG00000016367) nr1h3 (ENSTRUG00000016403) arl14ep (ENSTRUG00000024091) ENSTRUG00000016426 KCNA4 (ENSTRUG00000016428) cd151l (ENSTRUG00000016437) TMEM138 (ENSTRUG00000031092) Tetraodon MODERN SPECIES 20 prmt3 (ENSTNIG00000009611) slc6a5 (ENSTNIG00000009610) NELL1 (ENSTNIG00000009609) lrp4 (ENSTNIG00000009608) ENSTNIG00000000788 MAPK8IP1 (ENSTNIG00000009607) ENSTNIG00000009606 chst1 (ENSTNIG00000009605) slc35c1 (ENSTNIG00000009604) ENSTNIG00000009603 #29 slc1a2a (ENSTNIG00000009602) #30 apip (ENSTNIG00000009601) #33 LRRC4C (ENSTNIG00000009600) hsd17b12b (ENSTNIG00000009599) ttc17 (ENSTNIG00000009598) traf6 (ENSTNIG00000009597) #22 trpm5 (ENSTNIG00000009596) kcnq1.1 (ENSTNIG00000009595) lingo1b (ENSTNIG00000009594) fibinb (ENSTNIG00000009593) bbox1 (ENSTNIG00000009592) MADD (ENSTNIG00000009591) nr1h3 (ENSTNIG00000009590) arl14ep (ENSTNIG00000009589) ENSTNIG00000009588 KCNA4 (ENSTNIG00000009587) cd151l (ENSTNIG00000009586) TMEM138 (ENSTNIG00000009585) ENSTNIG00000009584 chrna7a (ENSTNIG00000009583) trip4 (ENSTNIG00000009582) Eupecaria_A ANCESTRAL SPECIES 15 ENSGT00950000182858.C.f ENSGT00940000157089.B ENSGT00960000187709 ENSGT00940000157530.b.a ENSGT00940000157530.b.b ENSGT00940000161262.a ENSGT00390000013315 ENSGT00940000154234.a.d #29 ENSGT00940000155379.g.a #30 ENSGT00530000068132 ENSGT00390000001680 #33 ENSGT00940000157405.c.b ENSGT00940000176990 ENSGT00940000154860.a.a ENSGT00390000006196 ENSGT00940000155426 #22 ENSGT00940000160588 ENSGT00940000167611 ENSGT00940000164990.d ENSGT00940000154996.a.b.b ENSGT00390000013180 ENSGT00860000135092 ENSGT00390000007623.c ENSGT00530000063582.b ENSGT00940000156718 ENSGT00940000159068 ENSGT00940000156586 ENSGT00940000172097 ENSGT00940000162248 ENSGT00940000157760.g.a ENSGT00390000018587.e Ballan wrasse DUPLICATION Ballan wrasse MODERN SPECIES 193 ENSLBEG00000026341 hsd17b12b (ENSLBEG00000026298) ttc17 (ENSLBEG00000026207) traf6 (ENSLBEG00000026145) #22 trpm5 (ENSLBEG00000026095) ENSLBEG00000026076 kcnq1.1 (ENSLBEG00000026054) lingo1b (ENSLBEG00000026040) luzp2 (ENSLBEG00000026021) ENSLBEG00000026011 bbox1 (ENSLBEG00000025975) MADD (ENSLBEG00000025924) nr1h3 (ENSLBEG00000025902) arl14ep (ENSLBEG00000025886) KCNA4 (ENSLBEG00000025878) ENSLBEG00000025861 cd151l (ENSLBEG00000025836) TMEM138 (ENSLBEG00000025821) ENSLBEG00000025763 Ballan wrasse MODERN SPECIES 2614 traf6 (ENSLBEG00000017606) #22 ENSLBEG00000017496 Eupecaria_B ANCESTRAL SPECIES 15 ENSGT00950000182858.C.f ENSGT00940000157089.B ENSGT00960000187709 ENSGT00940000157530.b.a ENSGT00940000157530.b.b ENSGT00940000161262.a ENSGT00390000013315 ENSGT00940000154234.a.d #29 ENSGT00940000155379.g.a #30 ENSGT00530000068132 ENSGT00390000001680 #33 ENSGT00940000157405.c.b ENSGT00940000176990 ENSGT00940000154860.a.a ENSGT00390000006196 ENSGT00940000155426 #22 ENSGT00940000160588 ENSGT00940000167611 ENSGT00940000164990.d ENSGT00940000154996.a.b.b ENSGT00390000013180 ENSGT00860000135092 ENSGT00390000007623.c ENSGT00530000063582.b ENSGT00940000156718 ENSGT00940000159068 ENSGT00940000156586 ENSGT00940000172097 ENSGT00940000162248 ENSGT00940000157760.g.a ENSGT00390000018587.e Eupecaria_C ANCESTRAL SPECIES 11 ENSGT00940000158287 ENSGT00950000182858.C.f ENSGT00940000157089.B ENSGT00960000187709 ENSGT00940000157530.b.a ENSGT00940000157530.b.b ENSGT00940000161262.a ENSGT00390000013315 ENSGT00940000154234.a.d #29 ENSGT00940000155379.g.a #30 ENSGT00390000001680 #33 ENSGT00940000157405.c.b ENSGT00940000176990 ENSGT00940000154860.a.a ENSGT00390000006196 ENSGT00940000155426 #22 ENSGT00940000160588 ENSGT00940000167611 ENSGT00940000164990.d ENSGT00940000154996.a.b.b ENSGT00390000013180 ENSGT00860000135092 ENSGT00390000007623.c ENSGT00530000063582.b ENSGT00940000156718 ENSGT00940000159068 ENSGT00940000156586 ENSGT00940000158152.b ENSGT00940000162248 ENSGT00940000157760.g.a ENSGT00390000018587.e Eupercaria_incertae_sedis ANCESTRAL SPECIES 7 ENSGT00940000158287 ENSGT00950000182858.C.f ENSGT00940000157089.B ENSGT00960000187709 ENSGT00940000157530.b.a ENSGT00940000157530.b.b ENSGT00940000161262.a ENSGT00390000013315 ENSGT00940000154234.a.d #29 ENSGT00940000155379.g.a #30 ENSGT00390000001680 #33 ENSGT00940000157405.c.b ENSGT00940000176990 ENSGT00940000154860.a.a ENSGT00390000006196 ENSGT00940000155426 #22 ENSGT00940000160588 ENSGT00940000164990.d ENSGT00940000154996.a.b.b ENSGT00390000013180 ENSGT00860000135092 ENSGT00390000007623.c ENSGT00530000063582.b ENSGT00940000156718 ENSGT00940000159068 ENSGT00940000156586 ENSGT00940000158152.b ENSGT00940000162248 ENSGT00940000157760.g.a ENSGT00390000018587.e ENSGT00390000013319 European seabass MODERN SPECIES 18 ENSDLAG00005031681 ENSDLAG00005026530 ENSDLAG00005023230 ENSDLAG00005023185 ENSDLAG00005031403 ENSDLAG00005027746 ENSDLAG00005033046 ENSDLAG00005023170 #29 slc1a2a (ENSDLAG00005023133) #30 apip (ENSDLAG00005023121) #33 ENSDLAG00005028663 ENSDLAG00005031274 ENSDLAG00005023114 hsd17b12b (ENSDLAG00005023065) ttc17 (ENSDLAG00005023010) ENSDLAG00005023002 #22 trpm5 (ENSDLAG00005022970) ENSDLAG00005022962 kcnq1.1 (ENSDLAG00005022920) ENSDLAG00005022918 ENSDLAG00005022913 ENSDLAG00005022909 fibinb (ENSDLAG00005034508) bbox1 (ENSDLAG00005022902) ENSDLAG00005022668 nr1h3 (ENSDLAG00005022607) ENSDLAG00005035015 ENSDLAG00005022588 ENSDLAG00005031709 ENSDLAG00005022556 ENSDLAG00005022567 Large yellow croaker MODERN SPECIES 480 NELL1 (ENSLCRG00005016259) lrp4 (ENSLCRG00005014902) A3GALT2 (ENSLCRG00005014876) MAPK8IP1 (ENSLCRG00005014875) ENSLCRG00005014874 ENSLCRG00005014873 chst1 (ENSLCRG00005014872) slc35c1 (ENSLCRG00005014871) ENSLCRG00005014870 #29 slc1a2a (ENSLCRG00005014732) #30 APIP (ENSLCRG00005014706) #33 LRRC4C (ENSLCRG00005014705) ENSLCRG00005014704 hsd17b12b (ENSLCRG00005014694) ttc17 (ENSLCRG00005014684) traf6 (ENSLCRG00005014629) #22 trpm5 (ENSLCRG00005014627) ENSLCRG00005014626 kcnq1.1 (ENSLCRG00005014622) lingo1b (ENSLCRG00005014620) luzp2 (ENSLCRG00005014618) ENSLCRG00005014616 fibinb (ENSLCRG00005014615) bbox1 (ENSLCRG00005014614) MADD (ENSLCRG00005014586) nr1h3 (ENSLCRG00005014458) arl14ep (ENSLCRG00005014456) ENSLCRG00005014455 KCNA4 (ENSLCRG00005014454) cd151l (ENSLCRG00005014453) TMEM138 (ENSLCRG00005014452) Gilthead seabream MODERN SPECIES 18 lrp4 (ENSSAUG00010004401) ENSSAUG00010004148 MAPK8IP1 (ENSSAUG00010023930) ENSSAUG00010023929 ENSSAUG00010023928 ENSSAUG00010023927 chst1 (ENSSAUG00010023926) slc35c1 (ENSSAUG00010023924) PAMR1 (ENSSAUG00010023923) #29 slc1a2a (ENSSAUG00010023921) #30 apip (ENSSAUG00010023905) #33 LRRC4C (ENSSAUG00010023903) ENSSAUG00010023901 hsd17b12b (ENSSAUG00010023900) ttc17 (ENSSAUG00010023858) traf6 (ENSSAUG00010023857) #22 trpm5 (ENSSAUG00010023856) ENSSAUG00010023855 kcnq1.1 (ENSSAUG00010023854) lingo1b (ENSSAUG00010023852) luzp2 (ENSSAUG00010023851) ENSSAUG00010023850 fibinb (ENSSAUG00010023849) bbox1 (ENSSAUG00010023848) MADD (ENSSAUG00010009467) nr1h3 (ENSSAUG00010009187) arl14ep (ENSSAUG00010009179) ENSSAUG00010009176 asb7 (ENSSAUG00010009172) aldh1a3 (ENSSAUG00010006672) ENSSAUG00010006614 Perciformes ANCESTRAL SPECIES 15 ENSGT00940000163467.a.b.b.a.b ENSGT00940000158287 ENSGT00950000182858.C.f ENSGT00940000157089.B ENSGT00940000157530.b.b ENSGT00940000161262.a ENSGT00390000013315 ENSGT00940000154234.a.d #29 ENSGT00940000155379.g.a #30 ENSGT00530000068132 ENSGT00390000001680 #33 ENSGT00940000157405.c.b ENSGT00940000176990 ENSGT00940000154860.a.a ENSGT00390000006196 ENSGT00940000155426 #22 ENSGT00940000160588 ENSGT00940000164990.d ENSGT00940000154996.a.b.b ENSGT00390000013180 ENSGT00860000135092 ENSGT00390000007623.c ENSGT00530000063582.b ENSGT00940000156718 ENSGT00940000159068 ENSGT00940000156586 ENSGT00940000172097 ENSGT00940000162248 ENSGT00940000157760.g.a ENSGT00390000018587.e ENSGT00390000013319 Perciformes_a ANCESTRAL SPECIES 13 ENSGT00810000125439.A ENSGT00940000163467.a.b.b.a.b ENSGT00940000158287 ENSGT00950000182858.C.f ENSGT00940000157089.B ENSGT00940000157530.b.b ENSGT00940000161262.a ENSGT00390000013315 ENSGT00940000154234.a.d #29 ENSGT00940000155379.g.a #30 ENSGT00390000001680 #33 ENSGT00940000157405.c.b ENSGT00940000176990 ENSGT00940000154860.a.a ENSGT00390000006196 ENSGT00940000155426 #22 ENSGT00940000160588 ENSGT00940000164990.d ENSGT00940000154996.a.b.b ENSGT00390000013180 ENSGT00860000135092 ENSGT00390000007623.c ENSGT00530000063582.b ENSGT00940000156718 ENSGT00940000159068 ENSGT00940000156586 ENSGT00940000172097 ENSGT00940000162248 ENSGT00940000157760.g.a ENSGT00390000018587.e ENSGT00390000013319 Pike perch MODERN SPECIES 82 slc35c1 (ENSSLUG00000017970) ENSSLUG00000017964 #29 slc1a2a (ENSSLUG00000017959) #30 apip (ENSSLUG00000017908) #33 LRRC4C (ENSSLUG00000017894) ENSSLUG00000017891 hsd17b12b (ENSSLUG00000017879) ttc17 (ENSSLUG00000017821) traf6 (ENSSLUG00000017786) #22 trpm5 (ENSSLUG00000017740) ENSSLUG00000017725 kcnq1.1 (ENSSLUG00000017670) lingo1b (ENSSLUG00000017658) luzp2 (ENSSLUG00000017652) ENSSLUG00000017651 fibinb (ENSSLUG00000017649) bbox1 (ENSSLUG00000017646) MADD (ENSSLUG00000017483) nr1h3 (ENSSLUG00000017279) ENSSLUG00000017272 arl14ep (ENSSLUG00000017268) ENSSLUG00000017241 KCNA4 (ENSSLUG00000017233) cd151l (ENSSLUG00000017224) Channel bull blenny MODERN SPECIES 17 lrp4 (ENSCGOG00000001539) ENSCGOG00000001792 MAPK8IP1 (ENSCGOG00000001798) ENSCGOG00000001811 ENSCGOG00000001815 chst1 (ENSCGOG00000001830) slc35c1 (ENSCGOG00000001834) ENSCGOG00000001839 #29 slc1a2a (ENSCGOG00000001849) #30 apip (ENSCGOG00000001852) #33 LRRC4C (ENSCGOG00000001884) ENSCGOG00000001886 hsd17b12b (ENSCGOG00000001890) ENSCGOG00000001946 ttc17 (ENSCGOG00000001962) traf6 (ENSCGOG00000002157) #22 trpm5 (ENSCGOG00000002202) ENSCGOG00000002213 kcnq1.1 (ENSCGOG00000002214) lingo1b (ENSCGOG00000002219) luzp2 (ENSCGOG00000002222) ENSCGOG00000002224 MADD (ENSCGOG00000002232) nr1h3 (ENSCGOG00000002270) arl14ep (ENSCGOG00000002414) ENSCGOG00000002416 KCNA4 (ENSCGOG00000002417) cd151l (ENSCGOG00000002422) TMEM138 (ENSCGOG00000002451) ENSCGOG00000002455 ddb1 (ENSCGOG00000002490) Cottioidei ANCESTRAL SPECIES 13 ENSGT00810000125439.A ENSGT00940000158287 ENSGT00950000182858.C.f ENSGT00940000157089.B ENSGT00940000157530.b.b ENSGT00940000161262.a ENSGT00390000013315 ENSGT00940000154234.a.d #29 ENSGT00940000155379.g.a #30 ENSGT00530000068132 ENSGT00390000001680 #33 ENSGT00940000157405.c.b ENSGT00940000176990 ENSGT00940000154860.a.a ENSGT00390000006196 ENSGT00940000155426 #22 ENSGT00940000160588 ENSGT00940000164990.d ENSGT00940000154996.a.b.b ENSGT00390000013180 ENSGT00860000135092 ENSGT00390000007623.c ENSGT00530000063582.b ENSGT00940000156718 ENSGT00940000159068 ENSGT00940000156586 ENSGT00940000172097 ENSGT00940000162248 ENSGT00940000157760.g.a ENSGT00390000018587.e ENSGT00390000013319 Stickleback MODERN SPECIES 1 prmt3 (ENSGACG00000017094) slc6a5 (ENSGACG00000017096) NELL1 (ENSGACG00000017098) lrp4 (ENSGACG00000017100) A3GALT2 (ENSGACG00000017105) MAPK8IP1 (ENSGACG00000017110) ENSGACG00000017112 chst1 (ENSGACG00000017115) slc35c1 (ENSGACG00000017116) slc1a2a (ENSGACG00000017121) #30 ENSGACG00000017123 apip (ENSGACG00000017125) #33 LRRC4C (ENSGACG00000017129) hsd17b12b (ENSGACG00000017131) ttc17 (ENSGACG00000017137) traf6 (ENSGACG00000017142) #22 trpm5 (ENSGACG00000017149) kcnq1.1 (ENSGACG00000017155) lingo1b (ENSGACG00000017157) luzp2 (ENSGACG00000017158) ENSGACG00000017159 ENSGACG00000017160 fibinb (ENSGACG00000017161) bbox1 (ENSGACG00000017162) MADD (ENSGACG00000017165) nr1h3 (ENSGACG00000017167) ENSGACG00000017168 cd151l (ENSGACG00000017169) TMEM138 (ENSGACG00000017171) ENSGACG00000017175 ddb1 (ENSGACG00000017182) Lumpfish MODERN SPECIES 18 slc6a5 (ENSCLMG00005022683) NELL1 (ENSCLMG00005000055) ENSCLMG00005000542 lrp4 (ENSCLMG00005000551) A3GALT2 (ENSCLMG00005000561) MAPK8IP1 (ENSCLMG00005000568) ENSCLMG00005000620 slc35c1 (ENSCLMG00005000644) PAMR1 (ENSCLMG00005000650) #29 slc1a2a (ENSCLMG00005000655) #30 apip (ENSCLMG00005000659) #33 LRRC4C (ENSCLMG00005000661) ENSCLMG00005000663 hsd17b12b (ENSCLMG00005000666) ttc17 (ENSCLMG00005000667) traf6 (ENSCLMG00005000677) #22 trpm5 (ENSCLMG00005000684) ENSCLMG00005000686 kcnq1.1 (ENSCLMG00005000690) lingo1b (ENSCLMG00005000695) luzp2 (ENSCLMG00005000698) ENSCLMG00005000702 fibinb (ENSCLMG00005000705) bbox1 (ENSCLMG00005000707) MADD (ENSCLMG00005000719) nr1h3 (ENSCLMG00005000726) arl14ep (ENSCLMG00005000867) ENSCLMG00005000868 KCNA4 (ENSCLMG00005000869) cd151l (ENSCLMG00005000870) TMEM138 (ENSCLMG00005000871) Percomorphaceae_D ANCESTRAL SPECIES 11 ENSGT00950000182858.C.f ENSGT00940000157089.B ENSGT00940000163916 ENSGT00960000187709 ENSGT00940000157530.b.a ENSGT00940000157530.b.b ENSGT00940000161262.a ENSGT00390000013315 ENSGT00940000154234.a.d #29 ENSGT00940000155379.g.a #30 ENSGT00390000001680 #33 ENSGT00940000157405.c.b ENSGT00940000176990 ENSGT00940000154860.a.a ENSGT00390000006196 ENSGT00940000155426 #22 ENSGT00940000160588 ENSGT00940000167611 ENSGT00940000164990.d ENSGT00940000154996.a.b.b ENSGT00390000013180 ENSGT00860000135092 ENSGT00390000007623.c ENSGT00530000063582.b ENSGT00940000156718 ENSGT00940000159068 ENSGT00940000156586 ENSGT00940000172097 ENSGT00940000162248 ENSGT00940000157760.g.a ENSGT00390000018587.e Anabantaria ANCESTRAL SPECIES 11 ENSGT00940000163467.a.b.b.a.b ENSGT00940000158287 ENSGT00950000182858.C.f ENSGT00940000157089.B ENSGT00960000187709 ENSGT00940000157530.b.b ENSGT00940000161262.a ENSGT00390000013315 ENSGT00940000154234.a.d #29 ENSGT00940000155379.g.a #30 ENSGT00390000001680 #33 ENSGT00940000157405.c.b ENSGT00940000176990 ENSGT00940000154860.a.a ENSGT00390000006196 ENSGT00940000155426 #22 ENSGT00940000160588 ENSGT00940000167611 ENSGT00940000164990.d ENSGT00940000154996.a.b.b ENSGT00390000013180 ENSGT00860000135092 ENSGT00390000007623.c ENSGT00530000063582.b ENSGT00940000156718 ENSGT00940000159068 ENSGT00940000156586 ENSGT00940000172097 ENSGT00940000162248 ENSGT00940000157760.g.a ENSGT00390000018587.e Anabantoidei ANCESTRAL SPECIES 8 ENSGT00940000154963 ENSGT00810000125439.A ENSGT00940000163467.a.b.b.a.b ENSGT00940000158287 ENSGT00950000182858.C.f ENSGT00940000157089.B ENSGT00960000187709 ENSGT00940000157530.b.b ENSGT00940000161262.a ENSGT00390000013315 ENSGT00940000155379.g.a #30 ENSGT00390000001680 #33 ENSGT00940000157405.c.b ENSGT00940000154860.a.a ENSGT00390000006196 ENSGT00940000155426 #22 ENSGT00940000160588 ENSGT00940000167611 ENSGT00940000164990.d ENSGT00940000154996.a.b.b ENSGT00390000013180 ENSGT00860000135092 ENSGT00390000007623.c ENSGT00530000063582.b ENSGT00940000156718 ENSGT00940000159068 ENSGT00940000156586 ENSGT00940000172097 ENSGT00940000162248 ENSGT00940000157760.g.a ENSGT00390000018587.e Climbing perch MODERN SPECIES 16 NELL1 (ENSATEG00000021543) ENSATEG00000021458 ENSATEG00000021428 ENSATEG00000021394 ENSATEG00000028460 ENSATEG00000021366 ENSATEG00000021360 ENSATEG00000030098 ENSATEG00000029077 slc1a2a (ENSATEG00000021313) #30 APIP (ENSATEG00000027665) #33 LRRC4C (ENSATEG00000021299) hsd17b12b (ENSATEG00000021238) ENSATEG00000027497 ttc17 (ENSATEG00000021172) ENSATEG00000021148 #22 trpm5 (ENSATEG00000021113) ENSATEG00000021085 ENSATEG00000021061 ENSATEG00000021055 ENSATEG00000021036 ENSATEG00000021010 fibinb (ENSATEG00000020997) bbox1 (ENSATEG00000020990) ENSATEG00000020830 nr1h3 (ENSATEG00000029349) ENSATEG00000020759 ENSATEG00000020748 ENSATEG00000020731 ENSATEG00000020710 ENSATEG00000020697 Siamese fighting fish MODERN SPECIES 14 si:ch211-107o10.3 (ENSBSLG00000005247) RASGRF1 (ENSBSLG00000005365) wdr76 (ENSBSLG00000005796) FRMD5 (ENSBSLG00000006671) lrp4 (ENSBSLG00000007912) ENSBSLG00000008692 A3GALT2 (ENSBSLG00000008699) ENSBSLG00000008955 ENSBSLG00000009050 slc35c1 (ENSBSLG00000009076) slc1a2a (ENSBSLG00000009104) #30 apip (ENSBSLG00000009527) #33 LRRC4C (ENSBSLG00000009547) hsd17b12b (ENSBSLG00000009741) ttc17 (ENSBSLG00000010086) traf6 (ENSBSLG00000010440) #22 trpm5 (ENSBSLG00000010445) ENSBSLG00000010478 KCNQ1 (ENSBSLG00000010746) lingo1b (ENSBSLG00000011592) luzp2 (ENSBSLG00000011625) ENSBSLG00000011712 fibinb (ENSBSLG00000011752) bbox1 (ENSBSLG00000011770) MADD (ENSBSLG00000011850) nr1h3 (ENSBSLG00000012270) arl14ep (ENSBSLG00000012440) ENSBSLG00000012449 KCNA4 (ENSBSLG00000012475) cd151l (ENSBSLG00000012480) TMEM138 (ENSBSLG00000012493) Zig-zag eel MODERN SPECIES 17 NELL1 (ENSMAMG00000015789) ENSMAMG00000015820 ENSMAMG00000015657 ENSMAMG00000015633 ENSMAMG00000015594 ENSMAMG00000015588 ENSMAMG00000015586 ENSMAMG00000025042 ENSMAMG00000015550 #29 slc1a2a (ENSMAMG00000015526) #30 apip (ENSMAMG00000015506) #33 ENSMAMG00000015494 ENSMAMG00000025683 hsd17b12b (ENSMAMG00000015426) ttc17 (ENSMAMG00000015309) ENSMAMG00000027515 #22 trpm5 (ENSMAMG00000015080) ENSMAMG00000015050 kcnq1.1 (ENSMAMG00000015000) ENSMAMG00000014980 ENSMAMG00000014960 ENSMAMG00000014935 fibinb (ENSMAMG00000014913) bbox1 (ENSMAMG00000014900) ENSMAMG00000014662 nr1h3 (ENSMAMG00000014609) ENSMAMG00000014587 ENSMAMG00000014579 ENSMAMG00000014570 ENSMAMG00000014529 ENSMAMG00000014513 Carangaria ANCESTRAL SPECIES 11 ENSGT00950000182858.C.f ENSGT00940000157089.B ENSGT00940000163916 ENSGT00960000187709 ENSGT00940000157530.b.a ENSGT00940000157530.b.b ENSGT00940000161262.a ENSGT00390000013315 ENSGT00940000154234.a.d #29 ENSGT00940000155379.g.a #30 ENSGT00390000001680 #33 ENSGT00940000157405.c.b ENSGT00940000176990 ENSGT00940000154860.a.a ENSGT00390000006196 ENSGT00940000155426 #22 ENSGT00940000160588 ENSGT00940000167611 ENSGT00940000164990.d ENSGT00940000154996.a.b.b ENSGT00390000013180 ENSGT00860000135092 ENSGT00390000007623.c ENSGT00530000063582.b ENSGT00940000156718 ENSGT00940000159068 ENSGT00940000156586 ENSGT00940000172097 ENSGT00940000162248 ENSGT00940000157760.g.a ENSGT00390000018587.e Pleuronectoidei ANCESTRAL SPECIES 39 ENSGT00810000125439.A ENSGT00940000163467.a.b.b.a.b ENSGT00940000158287 ENSGT00950000182858.C.f ENSGT00940000157089.B ENSGT00940000157530.b.a ENSGT00940000157530.b.b ENSGT00940000161262.a ENSGT00390000013315 ENSGT00940000154234.a.d #29 ENSGT00940000155379.g.a #30 ENSGT00390000001680 #33 ENSGT00940000157405.c.b ENSGT00940000154860.a.a ENSGT00390000006196 ENSGT00940000155426 #22 ENSGT00940000160588 ENSGT00940000167611 ENSGT00940000164990.d ENSGT00940000154996.a.b.b ENSGT00390000013180 ENSGT00860000135092 ENSGT00390000007623.c ENSGT00530000063582.b ENSGT00940000156718 ENSGT00940000159068 ENSGT00940000156586 ENSGT00940000172097 ENSGT00940000162248 ENSGT00940000157760.g.a ENSGT00390000018587.e Turbot MODERN SPECIES 17 slc6a5 (ENSSMAG00000008312) NELL1 (ENSSMAG00000008339) ENSSMAG00000008480 ENSSMAG00000008497 ENSSMAG00000008605 ENSSMAG00000008616 ENSSMAG00000008677 ENSSMAG00000008698 ENSSMAG00000008702 ENSSMAG00000029408 ENSSMAG00000008725 #29 slc1a2a (ENSSMAG00000008734) #30 apip (ENSSMAG00000008751) #33 hsd17b12b (ENSSMAG00000008774) ttc17 (ENSSMAG00000008833) TRAF6 (ENSSMAG00000008957) #22 trpm5 (ENSSMAG00000008987) ENSSMAG00000009130 kcnq1.1 (ENSSMAG00000009139) ENSSMAG00000024216 ENSSMAG00000009190 ENSSMAG00000009214 ENSSMAG00000009222 bbox1 (ENSSMAG00000009232) ENSSMAG00000009245 nr1h3 (ENSSMAG00000009312) ENSSMAG00000009335 FSHB (ENSSMAG00000033896) ENSSMAG00000009384 ENSSMAG00000022320 ENSSMAG00000027613 Tongue sole MODERN SPECIES 15 hsd11b2 (ENSCSEG00000003823) zdhhc1 (ENSCSEG00000003814) tppp3 (ENSCSEG00000003812) trpm1a (ENSCSEG00000003559) galr1b (ENSCSEG00000003506) ENSCSEG00000003490 ENSCSEG00000003480 ENSCSEG00000003451 ctrb.2 (ENSCSEG00000003259) ENSCSEG00000003237 ENSCSEG00000003215 ENSCSEG00000003192 ENSCSEG00000003179 hsd17b12b (ENSCSEG00000003169) ttc17 (ENSCSEG00000003111) traf6 (ENSCSEG00000003098) #22 trpm5 (ENSCSEG00000003046) ENSCSEG00000003033 kcnq1.1 (ENSCSEG00000003017) lingo1b (ENSCSEG00000003013) luzp2 (ENSCSEG00000003000) ENSCSEG00000002996 fibinb (ENSCSEG00000002993) bbox1 (ENSCSEG00000002986) LRRC4C (ENSCSEG00000002984) apip (ENSCSEG00000002980) #33 slc1a2a (ENSCSEG00000002968) #30 slc35c1 (ENSCSEG00000002963) KLHL10 (ENSCSEG00000002543) chst1 (ENSCSEG00000002539) ENSCSEG00000002538 Carangaria_A ANCESTRAL SPECIES 19 ENSGT00950000182858.C.f ENSGT00940000157089.B ENSGT00940000163916 ENSGT00960000187709 ENSGT00940000157530.b.a ENSGT00940000157530.b.b ENSGT00940000161262.a ENSGT00390000013315 ENSGT00940000154234.a.d #29 ENSGT00940000155379.g.a #30 ENSGT00390000001680 #33 ENSGT00940000157405.c.b ENSGT00940000176990 ENSGT00940000154860.a.a ENSGT00390000006196 ENSGT00940000155426 #22 ENSGT00940000160588 ENSGT00940000164990.d ENSGT00940000154996.a.b.b ENSGT00390000013180 ENSGT00860000135092 ENSGT00390000007623.c ENSGT00530000063582.b ENSGT00940000156718 ENSGT00940000159068 ENSGT00940000156586 ENSGT00940000172097 ENSGT00940000162248 ENSGT00940000157760.g.a ENSGT00390000018587.e ENSGT00390000013319 Seriola ANCESTRAL SPECIES 30 ENSGT00940000158287 ENSGT00940000157089.B ENSGT00940000163916 ENSGT00960000187709 ENSGT00940000157530.b.a ENSGT00940000157530.b.b ENSGT00940000161262.a ENSGT00390000013315 ENSGT00940000154234.a.d #29 ENSGT00940000155379.g.a #30 ENSGT00390000001680 #33 ENSGT00940000157405.c.b ENSGT00940000176990 ENSGT00940000154860.a.a ENSGT00390000006196 ENSGT00940000155426 #22 ENSGT00940000160588 ENSGT00940000164990.d ENSGT00940000154996.a.b.b ENSGT00390000013180 ENSGT00860000135092 ENSGT00390000007623.c ENSGT00530000063582.b ENSGT00940000156718 ENSGT00940000159068 ENSGT00940000156586 ENSGT00940000172097 ENSGT00940000162248 ENSGT00940000157760.g.a ENSGT00390000018587.e ENSGT00390000013319 Greater amberjack MODERN SPECIES 3 ENSSDUG00000015986 NELL1 (ENSSDUG00000015920) lrp4 (ENSSDUG00000015763) MAPK8IP1 (ENSSDUG00000015714) ENSSDUG00000015701 ENSSDUG00000015638 ENSSDUG00000015619 chst1 (ENSSDUG00000015618) slc35c1 (ENSSDUG00000015611) ENSSDUG00000015599 #29 slc1a2a (ENSSDUG00000015573) #30 apip (ENSSDUG00000015532) #33 LRRC4C (ENSSDUG00000015521) hsd17b12b (ENSSDUG00000015488) ttc17 (ENSSDUG00000015381) traf6 (ENSSDUG00000015351) #22 trpm5 (ENSSDUG00000015291) ENSSDUG00000015273 kcnq1.1 (ENSSDUG00000015239) lingo1b (ENSSDUG00000015230) luzp2 (ENSSDUG00000015214) ENSSDUG00000015203 bbox1 (ENSSDUG00000015176) MADD (ENSSDUG00000014979) nr1h3 (ENSSDUG00000014901) arl14ep (ENSSDUG00000014885) ENSSDUG00000014870 KCNA4 (ENSSDUG00000014840) cd151l (ENSSDUG00000014799) TMEM138 (ENSSDUG00000014777) ENSSDUG00000014694 Yellowtail amberjack MODERN SPECIES 3217 LRRC4C (ENSSLDG00000009109) ENSSLDG00000009081 ENSSLDG00000009040 ttc17 (ENSSLDG00000008924) traf6 (ENSSLDG00000008866) #22 trpm5 (ENSSLDG00000008679) ENSSLDG00000008643 kcnq1.1 (ENSSLDG00000008592) lingo1b (ENSSLDG00000008578) luzp2 (ENSSLDG00000008544) ENSSLDG00000008521 fibinb (ENSSLDG00000008506) bbox1 (ENSSLDG00000008467) MADD (ENSSLDG00000007965) nr1h3 (ENSSLDG00000007836) arl14ep (ENSSLDG00000007817) ENSSLDG00000007805 KCNA4 (ENSSLDG00000007797) cd151l (ENSSLDG00000007774) TMEM138 (ENSSLDG00000007748) Barramundi perch MODERN SPECIES 96 lrp4 (ENSLCAG00010018047) ENSLCAG00010018289 MAPK8IP1 (ENSLCAG00010018292) ENSLCAG00010018298 ENSLCAG00010018301 ENSLCAG00010018302 chst1 (ENSLCAG00010018305) slc35c1 (ENSLCAG00010018307) ENSLCAG00010018310 #29 slc1a2a (ENSLCAG00010018316) #30 apip (ENSLCAG00010018323) #33 LRRC4C (ENSLCAG00010018337) ENSLCAG00010018339 hsd17b12b (ENSLCAG00010018345) ttc17 (ENSLCAG00010018377) traf6 (ENSLCAG00010018578) #22 trpm5 (ENSLCAG00010018591) ENSLCAG00010018606 KCNQ1 (ENSLCAG00010018620) lingo1b (ENSLCAG00010018637) luzp2 (ENSLCAG00010018641) ENSLCAG00010018646 fibinb (ENSLCAG00010018649) bbox1 (ENSLCAG00010018651) MADD (ENSLCAG00010018725) nr1h3 (ENSLCAG00010018835) arl14ep (ENSLCAG00010018898) ENSLCAG00010018910 KCNA4 (ENSLCAG00010018923) cd151l (ENSLCAG00010018926) TMEM138 (ENSLCAG00010018931) Tiger tail seahorse MODERN SPECIES 348 ENSHCOG00000019451 ENSHCOG00000019438 ENSHCOG00000019418 ENSHCOG00000000517 ENSHCOG00000019389 ENSHCOG00000019388 ENSHCOG00000019385 chst1 (ENSHCOG00000019379) slc35c1 (ENSHCOG00000019372) slc1a2a (ENSHCOG00000019359) #30 apip (ENSHCOG00000019340) #33 LRRC4C (ENSHCOG00000019314) ENSHCOG00000019307 hsd17b12b (ENSHCOG00000019286) ttc17 (ENSHCOG00000019251) traf6 (ENSHCOG00000019132) #22 trpm5 (ENSHCOG00000019120) ENSHCOG00000019037 kcnq1.1 (ENSHCOG00000019025) lingo1b (ENSHCOG00000018962) luzp2 (ENSHCOG00000018948) ENSHCOG00000018917 ENSHCOG00000018907 fibinb (ENSHCOG00000018902) bbox1 (ENSHCOG00000018889) MADD (ENSHCOG00000018860) nr1h3 (ENSHCOG00000018788) arl14ep (ENSHCOG00000018772) ENSHCOG00000018757 KCNA4 (ENSHCOG00000018745) cd151l (ENSHCOG00000018727) Pinecone sodierfish MODERN SPECIES 17 ENSMMDG00005016339 ENSMMDG00005016365 ENSMMDG00005016422 ENSMMDG00005016425 chst1 (ENSMMDG00005016426) ENSMMDG00005016428 slc35c1 (ENSMMDG00005016429) CRY2 (ENSMMDG00005016431) PAMR1 (ENSMMDG00005016434) #29 slc1a2a (ENSMMDG00005016437) #30 apip (ENSMMDG00005016444) #33 LRRC4C (ENSMMDG00005016458) ENSMMDG00005016461 hsd17b12b (ENSMMDG00005016464) ttc17 (ENSMMDG00005016477) traf6 (ENSMMDG00005016512) #22 trpm5 (ENSMMDG00005016524) ENSMMDG00005016535 KCNQ1 (ENSMMDG00005016539) lingo1b (ENSMMDG00005016544) luzp2 (ENSMMDG00005016545) ENSMMDG00005016546 fibinb (ENSMMDG00005016548) bbox1 (ENSMMDG00005016551) MADD (ENSMMDG00005016724) nr1h3 (ENSMMDG00005022693) arl14ep (ENSMMDG00005022707) ENSMMDG00005022708 KCNA4 (ENSMMDG00005022710) cd151l (ENSMMDG00005022711) TMEM138 (ENSMMDG00005022717) Cod MODERN SPECIES 5 ENSGMOG00000029068 ENSGMOG00000024080 ENSGMOG00000023643 ENSGMOG00000032352 ENSGMOG00000026591 ENSGMOG00000027766 ENSGMOG00000027114 ENSGMOG00000011130 ENSGMOG00000028603 ENSGMOG00000011131 slc1a2a (ENSGMOG00000011121) #30 hsd17b12b (ENSGMOG00000002048) apip (ENSGMOG00000011141) #33 ENSGMOG00000020132 ttc17 (ENSGMOG00000014188) traf6 (ENSGMOG00000024723) #22 trpm5 (ENSGMOG00000014268) ENSGMOG00000014334 kcnq1.1 (ENSGMOG00000007001) ENSGMOG00000022363 lingo1b (ENSGMOG00000020262) ENSGMOG00000032019 ENSGMOG00000031872 ENSGMOG00000028714 ENSGMOG00000025604 ENSGMOG00000005320 fibinb (ENSGMOG00000020440) bbox1 (ENSGMOG00000005325) ENSGMOG00000005341 nr1h3 (ENSGMOG00000005399) ENSGMOG00000005413 Otomorpha ANCESTRAL SPECIES 366 ENSGT00950000182839.B.b.a ENSGT00940000165300.b.a.a.a ENSGT00940000164512.d ENSGT00940000162544.d ENSGT00940000165300.a ENSGT00940000154234.a.d #29 ENSGT00940000155379.g.a #30 ENSGT01000000214788 ENSGT00390000001680 #33 ENSGT00940000157405.c.b ENSGT00940000154860.a.a ENSGT00390000006196 ENSGT00940000155426 #22 ENSGT00530000063981.b.d #23 ENSGT00940000160588 ENSGT00940000164990.d ENSGT00940000154996.a.b.b Otophysi ANCESTRAL SPECIES 202 ENSGT00940000165530.b ENSGT01050000244857.A.a.b.f ENSGT00940000161238.l ENSGT00940000160745.c ENSGT00940000164715.a ENSGT01060000248595.b.a.b.a.n.b ENSGT00940000156049.b ENSGT00940000159628.c ENSGT00940000155971.d.b.a ENSGT00940000155426 #22 ENSGT00530000063981.b.d #23 ENSGT00940000160588 ENSGT00940000164990.d ENSGT00940000154996.a.b.b ENSGT00940000155491.d ENSGT00940000159422.b ENSGT00940000155399.a ENSGT00940000157725.o ENSGT00940000158086.a.a ENSGT00940000155524.f ENSGT00950000183156.b ENSGT00940000164020.c ENSGT00530000063023.A.a ENSGT00940000180790 ENSGT00490000043434 Characiphysae ANCESTRAL SPECIES 27 ENSGT00950000182839.B.b.a ENSGT00940000153903.a.b.a.a ENSGT00940000157462.C.c.a.l ENSGT00940000157661.e.b ENSGT01050000244857.A.a.b.f ENSGT00940000161238.l ENSGT00940000160745.c ENSGT00940000164715.a ENSGT01060000248595.b.a.b.a.n.b ENSGT00940000156049.b ENSGT00940000159628.c ENSGT00940000155971.d.b.a.c ENSGT00940000155426 #22 ENSGT00530000063981.b.d #23 ENSGT00940000160588 ENSGT00940000164990.d ENSGT00940000154996.a.b.b ENSGT00940000164020.c ENSGT00530000063023.A.a ENSGT00940000180790 ENSGT00490000043434 ENSGT00950000183051.b.a ENSGT00940000156397.a.a ENSGT00940000159068 ENSGT00940000156718 ENSGT00530000063582.b ENSGT00390000007623.c ENSGT01030000235035 Channel catfish MODERN SPECIES 19 ENSIPUG00000022538 Rassf7 (ENSIPUG00000022527) hrasb (ENSIPUG00000022502) ENSIPUG00000022492 ENSIPUG00000022485 tsg101b (ENSIPUG00000022428) BRSK2 (ENSIPUG00000022405) ABTB2 (ENSIPUG00000022359) B4GALNT4 (ENSIPUG00000022345) ENSIPUG00000022314 igf2a (ENSIPUG00000022309) CPT1A (ENSIPUG00000022263) Edil3 (ENSIPUG00000022233) HAPLN3 (ENSIPUG00000022227) ACAN (ENSIPUG00000022176) traf6 (ENSIPUG00000022164) #22 ENSIPUG00000022153 #23 trpm5 (ENSIPUG00000022100) cdkn1ca (ENSIPUG00000022095) kcnq1.1 (ENSIPUG00000021227) lingo1b (ENSIPUG00000021214) Sin3a (ENSIPUG00000021061) crabp1b (ENSIPUG00000021033) slc25a44b (ENSIPUG00000021014) RBPMS (ENSIPUG00000020981) cpeb1 (ENSIPUG00000020960) mtss1l (ENSIPUG00000020951) ENSIPUG00000020923 dpy19l3 (ENSIPUG00000020870) ZNF507 (ENSIPUG00000020853) TSHZ3 (ENSIPUG00000020845) Characiphysae_b ANCESTRAL SPECIES 28 ENSGT00940000165300.b.a.a.a ENSGT00950000182839.B.b.a ENSGT00940000153903.a.b.a.a ENSGT00940000157462.C.c.a.l ENSGT00940000157661.e.b ENSGT01050000244857.A.a.b.f ENSGT00940000161238.l ENSGT00940000160745.c ENSGT00940000164715.a ENSGT01060000248595.b.a.b.a.n.b ENSGT00940000156049.b ENSGT00940000159628.c ENSGT00940000155971.d.b.a.c ENSGT00940000155426 #22 ENSGT00530000063981.b.d #23 ENSGT00940000160588 ENSGT00940000164990.d ENSGT00940000154996.a.b.b ENSGT00940000155491.d ENSGT00940000159422.b ENSGT00940000155399.a ENSGT00940000158086.a.a ENSGT00940000155524.f ENSGT00950000183156.b ENSGT00940000164020.c ENSGT00530000063023.A.a ENSGT00940000180790 ENSGT00490000043434 ENSGT00950000183051.b.a Electric eel MODERN SPECIES 209 slc1a2a (ENSEEEG00000019243) #30 PAMR1 (ENSEEEG00000019239) #29 ascl1b (ENSEEEG00000019237) rassf7b (ENSEEEG00000019235) hrasb (ENSEEEG00000019231) ENSEEEG00000019230 BRSK2 (ENSEEEG00000019229) ABTB2 (ENSEEEG00000019122) B4GALNT4 (ENSEEEG00000019120) ENSEEEG00000019118 igf2a (ENSEEEG00000019117) cpt1aa (ENSEEEG00000018794) mfge8a (ENSEEEG00000018786) HAPLN3 (ENSEEEG00000018780) ENSEEEG00000018777 traf6 (ENSEEEG00000018776) #22 trpm5 (ENSEEEG00000018762) cdkn1ca (ENSEEEG00000018761) KCNQ1 (ENSEEEG00000018760) Characoidei ANCESTRAL SPECIES 24 ENSGT00950000182839.B.b.a ENSGT00940000153903.a.b.a.a ENSGT00940000157462.C.c.a.l ENSGT00940000157661.e.b ENSGT01050000244857.A.a.b.f ENSGT00940000161238.l ENSGT00940000160745.c ENSGT00940000164715.a ENSGT01060000248595.b.a.b.a.n.b ENSGT00940000156049.b ENSGT00940000159628.c ENSGT00940000155971.d.b.a.c ENSGT00940000155426 #22 ENSGT00530000063981.b.d #23 ENSGT00940000160588 ENSGT00940000164990.d ENSGT00940000154996.a.b.b ENSGT00940000164020.c ENSGT00530000063023.A.a ENSGT00940000180790 ENSGT00490000043434 ENSGT00950000183051.b.a ENSGT00940000156397.a.a ENSGT00940000159068 ENSGT00940000156718 ENSGT00530000063582.b ENSGT00390000007623.c ENSGT01030000235035 Mexicana tetra MODERN SPECIES 47 ENSAMXG00000028066 rassf7b (ENSAMXG00000007694) hrasb (ENSAMXG00000033907) ENSAMXG00000007690 BRSK2 (ENSAMXG00000007672) ENSAMXG00000038973 ABTB2 (ENSAMXG00000007654) B4GALNT4 (ENSAMXG00000007637) ENSAMXG00000007622 igf2a (ENSAMXG00000039167) ENSAMXG00000034619 cpt1aa (ENSAMXG00000007601) mfge8a (ENSAMXG00000007594) HAPLN3 (ENSAMXG00000007589) ACAN (ENSAMXG00000007573) traf6 (ENSAMXG00000007558) #22 ENSAMXG00000034197 #23 trpm5 (ENSAMXG00000007541) ENSAMXG00000043541 cdkn1ca (ENSAMXG00000029661) kcnq1.1 (ENSAMXG00000007521) lingo1b (ENSAMXG00000032291) ENSAMXG00000019158 DPY19L3 (ENSAMXG00000006298) ENSAMXG00000033989 ZNF507 (ENSAMXG00000006289) tshz3b (ENSAMXG00000006284) ZNF536 (ENSAMXG00000006281) ENSAMXG00000033278 nr1h3 (ENSAMXG00000006277) MADD (ENSAMXG00000006269) Red-bellied piranha MODERN SPECIES 274 ENSPNAG00000015831 ENSPNAG00000015872 igf2a (ENSPNAG00000015901) ENSPNAG00000015998 cpt1aa (ENSPNAG00000016057) mfge8a (ENSPNAG00000016071) HAPLN3 (ENSPNAG00000016115) ENSPNAG00000016138 ENSPNAG00000016165 ENSPNAG00000016325 traf6 (ENSPNAG00000016363) #22 ENSPNAG00000003414 #23 trpm5 (ENSPNAG00000016424) cdkn1ca (ENSPNAG00000016430) KCNQ1 (ENSPNAG00000016551) lingo1b (ENSPNAG00000016558) ENSPNAG00000016643 crabp1b (ENSPNAG00000016664) slc25a44b (ENSPNAG00000016680) rbpms2b (ENSPNAG00000004816) cpeb1b (ENSPNAG00000016750) ENSPNAG00000016828 Cyprinoidei ANCESTRAL SPECIES 3 ENSGT01000000214788.d ENSGT00530000063822.a.a.p #31 ENSGT00940000155379.g.a #30 ENSGT00940000154234.a.d #29 ENSGT00390000016768 #28 ENSGT00940000165300.b.a.a.a ENSGT00950000182839.B.b.a ENSGT00940000165530.b ENSGT01050000244857.A.a.b.f ENSGT00940000161238.l ENSGT00940000160745.c ENSGT01060000248595.b.a.b.a.n.b ENSGT00940000156049.b ENSGT00940000155971.d.b.b.b ENSGT00940000155971.d.b.a ENSGT00940000155426 #22 ENSGT00530000063981.b.d #23 ENSGT00940000160588 ENSGT00940000164990.d ENSGT00940000154996.a.b.b ENSGT00940000155491.d ENSGT00940000159422.b ENSGT00940000155399.a ENSGT00940000157725.o ENSGT00940000158086.a.a ENSGT00940000155524.f ENSGT00950000183156.b ENSGT00940000164020.c ENSGT00530000063023.A.a ENSGT00940000180790 ENSGT00490000043434 Cyprininae DUPLICATION Cyprininae ANCESTRAL SPECIES 1425 ENSGT00940000155426.m #22 ENSGT00940000160588.j Goldfish MODERN SPECIES 25 ENSCARG00000015177 LRRC4C (ENSCARG00000015169) apip (ENSCARG00000015077) #33 ENSCARG00000015065 slc1a2a (ENSCARG00000014835) #30 FJX1 (ENSCARG00000014822) #28 ascl1b (ENSCARG00000014817) ENSCARG00000014807 rassf7b (ENSCARG00000014802) hrasb (ENSCARG00000014798) ENSCARG00000014493 BRSK2 (ENSCARG00000014193) ENSCARG00000014144 ENSCARG00000014130 cpt1aa (ENSCARG00000013955) traf6 (ENSCARG00000013932) #22 trpm5 (ENSCARG00000013916) cdkn1ca (ENSCARG00000013903) kcnq1.1 (ENSCARG00000013742) ENSCARG00000013712 ENSCARG00000013710 lingo1b (ENSCARG00000013700) ENSCARG00000013639 crabp1b (ENSCARG00000013622) slc25a44b (ENSCARG00000013616) oaz2b (ENSCARG00000013608) rbpms2b (ENSCARG00000013605) cpeb1b (ENSCARG00000013505) ENSCARG00000011951 ENSCARG00000011899 ENSCARG00000011892 Cyprininae_a ANCESTRAL SPECIES 232 ENSGT00940000155379.g.a.n #30 ENSGT00940000154234.a.d.b #29 ENSGT00390000016768.e #28 ENSGT00940000165300.b.a.a.a.a ENSGT00940000163916.h ENSGT00950000182839.B.b.a.a ENSGT00940000155653.b.d.a ENSGT00940000153903.a.b.a.a.e ENSGT00940000157462.C.c.a.l.b ENSGT00940000157661.e.b.a ENSGT01050000244857.A.a.b.f.b ENSGT00940000161238.l.b ENSGT01060000248595.b.a.b.a.n.b.a ENSGT00940000156049.b.b ENSGT00940000155971.d.b.a.e ENSGT00940000155426.m #22 ENSGT00530000063981.b.d #23 ENSGT00940000160588.i.b ENSGT00940000162677.q.b ENSGT00940000164990.d.h ENSGT00940000154996.a.b.b.b ENSGT00940000155491.d.i.a ENSGT00940000159422.b.b ENSGT00940000155399.a.j ENSGT00940000157725.o.b ENSGT00940000158086.a.a ENSGT00940000155524.f.a.a ENSGT00950000183156.b.a.b ENSGT00940000164020.c.b ENSGT00530000063023.A.a.k ENSGT00490000043434.k Common carp reference MODERN SPECIES 6 slc1a2a (ENSCCRG00000008506) #30 FJX1 (ENSCCRG00000066816) #28 ascl1b (ENSCCRG00000046924) ENSCCRG00000076922 rassf7b (ENSCCRG00000011193) hrasb (ENSCCRG00000011187) ENSCCRG00000050362 ENSCCRG00000004728 ENSCCRG00000004364 ENSCCRG00000032474 ENSCCRG00000046819 mfge8a (ENSCCRG00000014023) cpt1aa (ENSCCRG00000014043) ENSCCRG00000040986 ENSCCRG00000075367 traf6 (ENSCCRG00000062778) #22 ENSCCRG00000041182 #23 trpm5 (ENSCCRG00000031644) cdkn1ca (ENSCCRG00000031636) kcnq1.1 (ENSCCRG00000031183) lingo1b (ENSCCRG00000016371) ENSCCRG00000019911 crabp1b (ENSCCRG00000028771) slc25a44b (ENSCCRG00000028767) oaz2b (ENSCCRG00000079922) ENSCCRG00000064787 cpeb1b (ENSCCRG00000026443) ENSCCRG00000003402 ENSCCRG00000080598 DPY19L3 (ENSCCRG00000011331) ENSCCRG00000078669 Golden-line barbel DUPLICATION Golden-line barbel MODERN SPECIES 824 pdk2b (ENSSGRG00000015415) wipf2b (ENSSGRG00000015965) JUP (ENSSGRG00000016070) ENSSGRG00000019362 ENSSGRG00000019366 igf2a (ENSSGRG00000019368) cpt1aa (ENSSGRG00000019405) mfge8a (ENSSGRG00000021252) ENSSGRG00000021307 ENSSGRG00000021311 traf6 (ENSSGRG00000021312) #22 trpm5 (ENSSGRG00000021319) cdkn1ca (ENSSGRG00000021320) kcnq1.1 (ENSSGRG00000021321) lingo1b (ENSSGRG00000021323) ENSSGRG00000021364 crabp1b (ENSSGRG00000022275) slc25a44b (ENSSGRG00000022302) oaz2b (ENSSGRG00000022303) rbpms2b (ENSSGRG00000022305) ENSSGRG00000022360 Golden-line barbel MODERN SPECIES 218 ENSSGRG00000051101 PAMR1 (ENSSGRG00000051098) #29 FJX1 (ENSSGRG00000051096) #28 ascl1b (ENSSGRG00000051095) rassf7b (ENSSGRG00000051093) hrasb (ENSSGRG00000051092) hrasb (ENSSGRG00000051072) ENSSGRG00000051070 BRSK2 (ENSSGRG00000051040) ENSSGRG00000051034 B4GALNT4 (ENSSGRG00000051032) ENSSGRG00000051030 cpt1aa (ENSSGRG00000050817) ENSSGRG00000050802 traf6 (ENSSGRG00000050792) #22 traf6 (ENSSGRG00000050779) #22 ENSSGRG00000050774 ENSSGRG00000050773 kcnq1.1 (ENSSGRG00000050771) lingo1b (ENSSGRG00000050770) ENSSGRG00000050348 crabp1b (ENSSGRG00000050336) slc25a44b (ENSSGRG00000050333) SEMA4B (ENSSGRG00000050332) harbi2 (ENSSGRG00000050331) oaz2b (ENSSGRG00000050329) cpeb1b (ENSSGRG00000050285) ENSSGRG00000050032 Cyprininae ANCESTRAL SPECIES 35 ENSGT00940000154234.a.d.a #29 ENSGT00390000016768.f #28 ENSGT00940000165300.b.a.a.a.b ENSGT00940000163916.g.a ENSGT00950000182839.B.b.a.b ENSGT00940000155653.b.d.b ENSGT00940000153903.a.b.a.a.f ENSGT00940000157462.C.c.a.l.a ENSGT00940000157661.e.b.b ENSGT01050000244857.A.a.b.f.a ENSGT00940000161238.l.a ENSGT00940000160745.c ENSGT01060000248595.b.a.b.a.n.b.b ENSGT00940000156049.b.a ENSGT00940000155971.d.b.a ENSGT00940000155426.n #22 ENSGT00530000063981.b.d #23 ENSGT00940000160588.i.a ENSGT00940000162677.q.a ENSGT00940000164990.d.g ENSGT00940000154996.a.b.b.a ENSGT00940000155491.d.i.b ENSGT00940000159422.b.a ENSGT00940000155399.a.i ENSGT00940000157725.o.a ENSGT00940000153533.a.t ENSGT00940000155399.b.d ENSGT00940000157796.d ENSGT00550000074827.fb.a ENSGT00940000157725.p.a ENSGT00940000158086.b Goldfish MODERN SPECIES 47 ENSCARG00000000780 ascl1b (ENSCARG00000000776) ENSCARG00000000771 rassf7b (ENSCARG00000000762) hrasb (ENSCARG00000000755) ENSCARG00000000723 BRSK2 (ENSCARG00000000533) ABTB2 (ENSCARG00000000407) B4GALNT4 (ENSCARG00000000329) ENSCARG00000012866 ENSCARG00000012855 igf2a (ENSCARG00000012839) cpt1aa (ENSCARG00000012769) mfge8a (ENSCARG00000012694) ENSCARG00000012673 traf6 (ENSCARG00000012659) #22 ENSCARG00000012650 #23 trpm5 (ENSCARG00000012633) cdkn1ca (ENSCARG00000012621) kcnq1.1 (ENSCARG00000012583) lingo1b (ENSCARG00000012574) ENSCARG00000012553 crabp1b (ENSCARG00000012540) oaz2b (ENSCARG00000012528) ENSCARG00000012505 cpeb1b (ENSCARG00000011975) ENSCARG00000011626 ENSCARG00000011546 DPY19L3 (ENSCARG00000011496) ZNF507 (ENSCARG00000011487) tshz3b (ENSCARG00000011481) Cyprininae_a ANCESTRAL SPECIES 55 ENSGT00940000154234.a.d.a #29 ENSGT00390000016768.f #28 ENSGT00940000165300.b.a.a.a.b ENSGT00950000182839.B.b.a.b ENSGT00940000155653.b.d.b ENSGT00940000153903.a.b.a.a.f ENSGT00940000157462.C.c.a.l.a ENSGT00940000157661.e.b.b ENSGT01050000244857.A.a.b.f.a ENSGT00940000161238.l.a ENSGT00940000160745.c ENSGT01060000248595.b.a.b.a.n.b.b ENSGT00940000156049.b.a ENSGT00940000155971.d.b.b.b ENSGT00940000155971.d.b.a.f ENSGT00940000155426.n #22 ENSGT00940000160588.i.a ENSGT00940000162677.q.a ENSGT00940000164990.d.g ENSGT00940000154996.a.b.b.a ENSGT00940000155491.d.i.b ENSGT00940000159422.b.a ENSGT00940000155399.a.i ENSGT00940000157725.o.a ENSGT00940000158086.b ENSGT00940000155524.f.a.b ENSGT00950000183156.b.a.a ENSGT00940000164020.c.a ENSGT00530000063023.A.a.l ENSGT00490000043434.l ENSGT00950000183051.b.a.i Common carp reference MODERN SPECIES slc1a2a (ENSCCRG00000067907) #30 PAMR1 (ENSCCRG00000046927) #29 FJX1 (ENSCCRG00000062310) #28 ascl1b (ENSCCRG00000033489) rassf7b (ENSCCRG00000033471) ENSCCRG00000078295 ENSCCRG00000019633 ENSCCRG00000020093 ENSCCRG00000048831 ENSCCRG00000077523 ENSCCRG00000054102 igf2a (ENSCCRG00000044723) cpt1aa (ENSCCRG00000050268) mfge8a (ENSCCRG00000082007) ENSCCRG00000002468 traf6 (ENSCCRG00000002480) #22 trpm5 (ENSCCRG00000048269) cdkn1ca (ENSCCRG00000048268) kcnq1.1 (ENSCCRG00000016379) lingo1b (ENSCCRG00000031226) ENSCCRG00000028802 crabp1b (ENSCCRG00000075230) slc25a44b (ENSCCRG00000054943) oaz2b (ENSCCRG00000059970) ENSCCRG00000026468 cpeb1b (ENSCCRG00000019545) ENSCCRG00000066563 ENSCCRG00000066727 DPY19L3 (ENSCCRG00000014957) ZNF507 (ENSCCRG00000055316) ENSCCRG00000056446 Golden-line barbel MODERN SPECIES 218 apip (ENSSGRG00000051102) #33 ENSSGRG00000051101 PAMR1 (ENSSGRG00000051098) #29 FJX1 (ENSSGRG00000051096) #28 ascl1b (ENSSGRG00000051095) rassf7b (ENSSGRG00000051093) hrasb (ENSSGRG00000051092) hrasb (ENSSGRG00000051072) ENSSGRG00000051070 BRSK2 (ENSSGRG00000051040) ENSSGRG00000051034 B4GALNT4 (ENSSGRG00000051032) ENSSGRG00000051030 cpt1aa (ENSSGRG00000050817) ENSSGRG00000050802 traf6 (ENSSGRG00000050792) #22 traf6 (ENSSGRG00000050779) #22 ENSSGRG00000050774 ENSSGRG00000050773 kcnq1.1 (ENSSGRG00000050771) lingo1b (ENSSGRG00000050770) ENSSGRG00000050348 crabp1b (ENSSGRG00000050336) slc25a44b (ENSSGRG00000050333) SEMA4B (ENSSGRG00000050332) harbi2 (ENSSGRG00000050331) oaz2b (ENSSGRG00000050329) cpeb1b (ENSSGRG00000050285) ENSSGRG00000050032 Zebrafish MODERN SPECIES 22 PAMR1 (ENSDARG00000103184) #29 FJX1 (ENSDARG00000035873) #28 ascl1b (ENSDARG00000101628) ENSDARG00000009702 rassf7b (ENSDARG00000003193) hrasb (ENSDARG00000005651) ENSDARG00000011897 BRSK2 (ENSDARG00000077791) ABTB2 (ENSDARG00000059751) B4GALNT4 (ENSDARG00000076701) ENSDARG00000011088 igf2a (ENSDARG00000018643) cpt1aa (ENSDARG00000059770) mfge8a (ENSDARG00000015349) ENSDARG00000035891 traf6 (ENSDARG00000028058) #22 ENSDARG00000105788 #23 trpm5 (ENSDARG00000059792) cdkn1ca (ENSDARG00000010878) kcnq1.1 (ENSDARG00000059798) lingo1b (ENSDARG00000035899) ENSDARG00000059812 crabp1b (ENSDARG00000035904) slc25a44b (ENSDARG00000035905) oaz2b (ENSDARG00000059815) rbpms2b (ENSDARG00000079578) cpeb1b (ENSDARG00000008454) ENSDARG00000087260 ENSDARG00000078088 ENSDARG00000111309 DPY19L3 (ENSDARG00000079013) Clupeiformes ANCESTRAL SPECIES 44 ENSGT00700000104539.b.b ENSGT00940000160574 #25 ENSGT00440000034605 #26 ENSGT00390000016768 #28 ENSGT00940000154234.a.d #29 ENSGT00940000155379.g.a #30 ENSGT00390000001680 #33 ENSGT00940000157405.c.b ENSGT00940000154860.a.a ENSGT00390000006196 ENSGT00940000155426 #22 ENSGT00530000063981.b.d #23 ENSGT00940000160588 ENSGT00940000162677 ENSGT00940000161001 ENSGT00950000182857.a.a.b.b.b ENSGT00940000154996.a.b.b ENSGT00940000155399.a ENSGT00940000159422.b ENSGT00940000155491.d ENSGT00390000003488.a.a ENSGT00840000129915.b ENSGT00940000158020.d ENSGT00390000000096.b.a ENSGT00940000159303 ENSGT01030000234532.A.b Denticle herring MODERN SPECIES 7 ENSDCDG00000035864 ENSDCDG00000035863 ENSDCDG00000035862 ENSDCDG00000035861 ENSDCDG00000035860 ENSDCDG00000035859 ENSDCDG00000035858 ENSDCDG00000035857 ENSDCDG00000035856 #29 slc1a2a (ENSDCDG00000035855) #30 apip (ENSDCDG00000035854) #33 LRRC4C (ENSDCDG00000035853) ENSDCDG00000035852 hsd17b12b (ENSDCDG00000035851) ttc17 (ENSDCDG00000035850) traf6 (ENSDCDG00000035849) #22 trpm5 (ENSDCDG00000035848) ENSDCDG00000035847 ENSDCDG00000035846 ifitm5 (ENSDCDG00000035842) LINGO1 (ENSDCDG00000035841) slc25a44b (ENSDCDG00000035837) crabp1b (ENSDCDG00000035835) ENSDCDG00000035833 tnfaip8l3 (ENSDCDG00000035831) cyp19a1a (ENSDCDG00000035826) gldn (ENSDCDG00000035812) dmxl2 (ENSDCDG00000035771) sema6dl (ENSDCDG00000035664) slc24a5 (ENSDCDG00000035652) myef2 (ENSDCDG00000035643) Atlantic herring DUPLICATION Atlantic herring MODERN SPECIES 19 PPIP5K1 (ENSCHAG00000012889) ENSCHAG00000013341 hapln3 (ENSCHAG00000013424) mfge8b (ENSCHAG00000013443) abhd2b (ENSCHAG00000013808) rlbp1b (ENSCHAG00000014002) ENSCHAG00000014051 pdia3 (ENSCHAG00000014064) CATSPER2 (ENSCHAG00000014313) ckmt1 (ENSCHAG00000014407) ENSCHAG00000014861 si:ch1073-281m9.1 (ENSCHAG00000014870) alkbh3 (ENSCHAG00000014876) hsd17b12a (ENSCHAG00000014889) api5 (ENSCHAG00000015164) ENSCHAG00000015667 #22 ENSCHAG00000015939 #23 ube2h (ENSCHAG00000015945) NR2C1 (ENSCHAG00000015983) ENSCHAG00000016323 metap2b (ENSCHAG00000016519) ENSCHAG00000016579 hal (ENSCHAG00000016631) ELK3 (ENSCHAG00000016930) CDK17 (ENSCHAG00000016953) ucmab (ENSCHAG00000017292) camk1db (ENSCHAG00000017326) dhtkd1 (ENSCHAG00000019216) ENSCHAG00000019865 FBXO31 (ENSCHAG00000020194) ENSCHAG00000020499 Atlantic herring MODERN SPECIES 22 ENSCHAG00000003831 ENSCHAG00000003804 ENSCHAG00000003696 ENSCHAG00000003685 ENSCHAG00000003661 ascl1b (ENSCHAG00000003653) ldlrad3 (ENSCHAG00000003625) FJX1 (ENSCHAG00000003615) #28 PAMR1 (ENSCHAG00000003579) #29 slc1a2a (ENSCHAG00000001007) #30 ENSCHAG00000000293 apip (ENSCHAG00000000270) #33 LRRC4C (ENSCHAG00000000256) hsd17b12b (ENSCHAG00000027532) ttc17 (ENSCHAG00000027522) traf6 (ENSCHAG00000027515) #22 ENSCHAG00000027514 #23 trpm5 (ENSCHAG00000027512) cdkn1ca (ENSCHAG00000027510) KCNQ1 (ENSCHAG00000027489) ifitm5 (ENSCHAG00000027481) lingo1b (ENSCHAG00000027479) psma4 (ENSCHAG00000027474) slc25a44b (ENSCHAG00000027472) ENSCHAG00000027465 tnfaip8l3 (ENSCHAG00000027458) cyp19a1a (ENSCHAG00000027387) gldn (ENSCHAG00000027363) dmxl2 (ENSCHAG00000027257) sema6dl (ENSCHAG00000027149) slc24a5 (ENSCHAG00000027112) Spotted gar MODERN SPECIES 666 slc1a2a (ENSLOCG00000001388) #30 ENSLOCG00000001378 #31 pdhx (ENSLOCG00000001356) #32 apip (ENSLOCG00000001341) #33 ehf (ENSLOCG00000001316) #34 lrrc4ca (ENSLOCG00000017316) IFTAP (ENSLOCG00000001297) #20 rag2 (ENSLOCG00000017315) #21 rag1 (ENSLOCG00000001283) ENSLOCG00000001253 si:ch1073-281m9.1 (ENSLOCG00000017314) alkbh3 (ENSLOCG00000001237) hsd17b12a (ENSLOCG00000001197) ttc17 (ENSLOCG00000001159) api5 (ENSLOCG00000001136) traf6 (ENSLOCG00000001118) #22 PRR5L (ENSLOCG00000001097) #23 commd9 (ENSLOCG00000001074) #24 cat (ENSLOCG00000001015) #36 ENSLOCG00000000993 ifitm5 (ENSLOCG00000000971) ENSLOCG00000000936 KCNQ1 (ENSLOCG00000000916) ENSLOCG00000000889 trpm5 (ENSLOCG00000000857) ptdss2 (ENSLOCG00000000829) BRSK2 (ENSLOCG00000000765) ldha (ENSLOCG00000000737) tsg101a (ENSLOCG00000000710) hrasb (ENSLOCG00000000684) LRRC56 (ENSLOCG00000000649) Reedfish MODERN SPECIES 10 FJX1 (ENSECRG00000000594) #28 ENSECRG00000000604 apip (ENSECRG00000000625) #33 ehf (ENSECRG00000000644) #34 ENSECRG00000000662 ENSECRG00000000675 lrrc4ca (ENSECRG00000000687) ENSECRG00000000717 ENSECRG00000000780 alkbh3 (ENSECRG00000000807) hsd17b12a (ENSECRG00000000852) ttc17 (ENSECRG00000000909) api5 (ENSECRG00000000985) ENSECRG00000001064 traf6 (ENSECRG00000001126) #22 PRR5L (ENSECRG00000001145) #23 commd9 (ENSECRG00000001163) #24 cat (ENSECRG00000001208) #36 ENSECRG00000001358 ELF5 (ENSECRG00000001372) #35 rassf7b (ENSECRG00000001428) ENSECRG00000001486 ENSECRG00000001510 hrasb (ENSECRG00000001556) ENSECRG00000001588 ENSECRG00000001607 ENSECRG00000001631 irf7 (ENSECRG00000001653) ascl1b (ENSECRG00000001670) th (ENSECRG00000001701)