Rodentia	ANCESTRAL SPECIES		ENSGT00950000182802.B.a.a.a.a.i.b	ENSGT00940000159314	ENSGT00940000155194	ENSGT00390000013174	ENSGT00940000156585	ENSGT01090000260040.b.b.b.a	ENSGT00950000183172.B	ENSGT00390000004191	ENSGT00390000015719.c	ENSGT00940000155361	ENSGT00390000016565	ENSGT00900000143263	ENSGT00390000017418	ENSGT00940000160747 #19	ENSGT00940000156338 #21	ENSGT00950000182900.B #22	ENSGT00390000007371 #23	ENSGT00940000160932 #24	ENSGT00940000159398 #25	ENSGT00940000163188	ENSGT00530000063929.a.b #26	ENSGT01060000248564.b.a.a.a #27	ENSGT00950000182962.b.a #28	ENSGT00390000018883 #29	ENSGT00940000157554 #30	ENSGT00940000160073 #32	ENSGT01000000214440.A.a.b.a #33	ENSGT00940000156115 #34	ENSGT00530000063770.c.a	ENSGT00390000010045	ENSGT00950000183182.a.a
Rodentia_B	ANCESTRAL SPECIES		ENSGT00950000182802.B.a.a.a.a.i.b	ENSGT00940000159314	ENSGT00940000155194	ENSGT00390000013174	ENSGT00940000156585	ENSGT01090000260040.b.b.b.a	ENSGT00950000183172.B	ENSGT00390000004191	ENSGT00390000015719.c	ENSGT00940000155361	ENSGT00390000016565	ENSGT00900000143263	ENSGT00390000017418	ENSGT00940000160747 #19	ENSGT00940000156338 #21	ENSGT00950000182900.B #22	ENSGT00390000007371 #23	ENSGT00940000160932 #24	ENSGT00940000159398 #25	ENSGT00940000163188	ENSGT00530000063929.a.b #26	ENSGT01060000248564.b.a.a.a #27	ENSGT00950000182962.b.a #28	ENSGT00390000018883 #29	ENSGT00940000157554 #30	ENSGT00940000160073 #32	ENSGT01000000214440.A.a.b.a #33	ENSGT00940000156115 #34	ENSGT00530000063770.c.a	ENSGT00390000010045	ENSGT00950000183182.a.a
Myomorpha	ANCESTRAL SPECIES	3	ENSGT00950000182802.B.a.a.a.a.i.b	ENSGT00940000159314	ENSGT00940000155194	ENSGT00390000013174	ENSGT00940000156585	ENSGT01090000260040.b.b.b.a	ENSGT00950000183172.B	ENSGT00390000004191	ENSGT00390000015719.c	ENSGT00940000155361	ENSGT00390000016565	ENSGT00900000143263	ENSGT00390000017418	ENSGT00940000160747 #19	ENSGT00940000156338 #21	ENSGT00950000182900.B #22	ENSGT00390000007371 #23	ENSGT00940000160932 #24	ENSGT00940000159398 #25	ENSGT00940000163188	ENSGT00530000063929.a.b #26	ENSGT01060000248564.b.a.a.a #27	ENSGT00950000182962.b.a #28	ENSGT00390000018883 #29	ENSGT00940000157554 #30	ENSGT00940000160073 #32	ENSGT01000000214440.A.a.b.a #33	ENSGT00940000156115 #34	ENSGT00530000063770.c.a	ENSGT00390000010045	ENSGT00950000183182.a.a
Muroidea	ANCESTRAL SPECIES	3	ENSGT00950000182802.B.a.a.a.a.i.b	ENSGT00940000159314	ENSGT00940000155194	ENSGT00390000013174	ENSGT00940000156585	ENSGT01090000260040.b.b.b.a	ENSGT00950000183172.B	ENSGT00390000004191	ENSGT00390000015719.c	ENSGT00940000155361	ENSGT00390000016565	ENSGT00900000143263	ENSGT00390000017418	ENSGT00940000160747 #19	ENSGT00940000156338 #21	ENSGT00950000182900.B #22	ENSGT00390000007371 #23	ENSGT00940000160932 #24	ENSGT00940000159398 #25	ENSGT00530000063929.a.b #26	ENSGT01060000248564.b.a.a.a #27	ENSGT00950000182962.b.a #28	ENSGT00390000018883 #29	ENSGT00940000157554 #30	ENSGT00940000160073 #32	ENSGT01000000214440.A.a.b.a #33	ENSGT00940000156115 #34	ENSGT00530000063770.c.a	ENSGT00390000010045	ENSGT00950000183182.a.a	ENSGT01090000260093.b
Upper Galilee mountains blind mole rat	MODERN SPECIES	967												ENSNGAG00000016538 #18	Tent5b (ENSNGAG00000010187) #19	ENSNGAG00000020552 #20	Slc9a1 (ENSNGAG00000016127) #21	Wdtc1 (ENSNGAG00000013121) #22	Tmem222 (ENSNGAG00000011488) #23	Sytl1 (ENSNGAG00000014815) #24	Map3k6 (ENSNGAG00000017010) #25	Cd164l2 (ENSNGAG00000019740) #26	Gpr3 (ENSNGAG00000017974) #27	Wasf2 (ENSNGAG00000017438) #28	Ahdc1 (ENSNGAG00000013639) #29	Fgr (ENSNGAG00000014779) #30	ENSNGAG00000012320 #31	Fam76a (ENSNGAG00000021702) #32	Stx12 (ENSNGAG00000022319) #33	Ppp1r8 (ENSNGAG00000001089) #34
Muroidea_A	ANCESTRAL SPECIES	3	ENSGT00950000182802.B.a.a.a.a.i.b	ENSGT00940000159314	ENSGT00940000155194	ENSGT00390000013174	ENSGT00940000156585	ENSGT01090000260040.b.b.b.a	ENSGT00950000183172.B	ENSGT00390000004191	ENSGT00390000015719.c	ENSGT00940000155361	ENSGT00390000016565	ENSGT00900000143263	ENSGT00390000017418	ENSGT00940000160747 #19	ENSGT00940000156338 #21	ENSGT00950000182900.B #22	ENSGT00390000007371 #23	ENSGT00940000160932 #24	ENSGT00940000159398 #25	ENSGT00530000063929.a.b #26	ENSGT01060000248564.b.a.a.a #27	ENSGT00950000182962.b.a #28	ENSGT00390000018883 #29	ENSGT00940000157554 #30	ENSGT00940000160073 #32	ENSGT01000000214440.A.a.b.a #33	ENSGT00940000156115 #34	ENSGT00530000063770.c.a	ENSGT00390000010045	ENSGT00950000183182.a.a	ENSGT01090000260093.b
Murinae	ANCESTRAL SPECIES	2	ENSGT00950000182802.B.a.a.a.a.i.b	ENSGT00940000159314	ENSGT00940000155194	ENSGT00390000013174	ENSGT00940000156585	ENSGT01090000260040.b.b.b.a	ENSGT00950000183172.B	ENSGT00390000004191	ENSGT00390000015719.c	ENSGT00940000155361	ENSGT00900000143263	ENSGT00390000016565	ENSGT00390000017418	ENSGT00940000160747 #19	ENSGT00940000156338 #21	ENSGT00950000182900.B #22	ENSGT00390000007371 #23	ENSGT00940000160932 #24	ENSGT00940000159398 #25	ENSGT00530000063929.a.b #26	ENSGT01060000248564.b.a.a.a #27	ENSGT00950000182962.b.a #28	ENSGT00390000018883 #29	ENSGT00940000157554 #30	ENSGT00940000160073 #32	ENSGT01000000214440.A.a.b.a #33	ENSGT00940000156115 #34	ENSGT00530000063770.c.a	ENSGT00390000010045	ENSGT00950000183182.a.a	ENSGT01090000260093.b
Mus	ANCESTRAL SPECIES	3	ENSGT00950000182802.B.a.a.a.a.i.b	ENSGT00940000159314	ENSGT00940000155194	ENSGT00390000013174	ENSGT00940000156585	ENSGT01090000260040.b.b.b.a	ENSGT00950000183172.B	ENSGT00390000004191	ENSGT00390000015719.c	ENSGT00940000155361	ENSGT00900000143263	ENSGT00390000016565	ENSGT00390000017418	ENSGT00940000160747 #19	ENSGT00940000156338 #21	ENSGT00950000182900.B #22	ENSGT00390000007371 #23	ENSGT00940000160932 #24	ENSGT00940000159398 #25	ENSGT00530000063929.a.b #26	ENSGT01060000248564.b.a.a.a #27	ENSGT00950000182962.b.a #28	ENSGT00390000018883 #29	ENSGT00940000157554 #30	ENSGT00940000160073 #32	ENSGT01000000214440.A.a.b.a #33	ENSGT00940000156115 #34	ENSGT00530000063770.c.a	ENSGT00390000010045	ENSGT00950000183182.a.a	ENSGT01090000260093.b
Mus_A	ANCESTRAL SPECIES	3	ENSGT00950000182802.B.a.a.a.a.i.b	ENSGT00940000159314	ENSGT00940000155194	ENSGT00390000013174	ENSGT00940000156585	ENSGT01090000260040.b.b.b.a	ENSGT00950000183172.B	ENSGT00390000004191	ENSGT00390000015719.c	ENSGT00940000155361	ENSGT00900000143263	ENSGT00390000016565	ENSGT00390000017418	ENSGT00940000160747 #19	ENSGT00940000156338 #21	ENSGT00950000182900.B #22	ENSGT00390000007371 #23	ENSGT00940000160932 #24	ENSGT00940000159398 #25	ENSGT00530000063929.a.b #26	ENSGT01060000248564.b.a.a.a #27	ENSGT00950000182962.b.a #28	ENSGT00390000018883 #29	ENSGT00940000157554 #30	ENSGT00940000160073 #32	ENSGT01000000214440.A.a.b.a #33	ENSGT00940000156115 #34	ENSGT00530000063770.c.a	ENSGT00390000010045	ENSGT00950000183182.a.a	ENSGT01090000260093.b
Mus_B	ANCESTRAL SPECIES	5	ENSGT00950000182802.B.a.a.a.a.i.b	ENSGT00940000159314	ENSGT00940000155194	ENSGT00390000013174	ENSGT00940000156585	ENSGT01090000260040.b.b.b.a	ENSGT00950000183172.B	ENSGT00390000004191	ENSGT00390000015719.c	ENSGT00940000155361	ENSGT00900000143263	ENSGT00390000016565	ENSGT00390000017418	ENSGT00940000160747 #19	ENSGT00940000156338 #21	ENSGT00950000182900.B #22	ENSGT00390000007371 #23	ENSGT00940000160932 #24	ENSGT00940000159398 #25	ENSGT00530000063929.a.b #26	ENSGT01060000248564.b.a.a.a #27	ENSGT00950000182962.b.a #28	ENSGT00390000018883 #29	ENSGT00940000157554 #30	ENSGT00940000160073 #32	ENSGT01000000214440.A.a.b.a #33	ENSGT00940000156115 #34	ENSGT00530000063770.c.a	ENSGT00390000010045	ENSGT00950000183182.a.a	ENSGT01090000260093.b
Mus_C	ANCESTRAL SPECIES	2	ENSGT00950000182802.B.a.a.a.a.i.b	ENSGT00940000159314	ENSGT00940000155194	ENSGT00390000013174	ENSGT00940000156585	ENSGT01090000260040.b.b.b.a	ENSGT00950000183172.B	ENSGT00390000004191	ENSGT00390000015719.c	ENSGT00940000155361	ENSGT00900000143263	ENSGT00390000016565	ENSGT00390000017418	ENSGT00940000160747 #19	ENSGT00940000156338 #21	ENSGT00950000182900.B #22	ENSGT00390000007371 #23	ENSGT00940000160932 #24	ENSGT00940000159398 #25	ENSGT00530000063929.a.b #26	ENSGT01060000248564.b.a.a.a #27	ENSGT00950000182962.b.a #28	ENSGT00390000018883 #29	ENSGT00940000157554 #30	ENSGT00940000160073.g #32	ENSGT01000000214440.A.a.b.a #33	ENSGT00940000156115 #34	ENSGT00530000063770.c.a	ENSGT00390000010045	ENSGT00950000183182.a.a	ENSGT01090000260093.b
spretus	MODERN SPECIES	13	Lin28a (MGP_SPRETEiJ_G0027583)	Dhdds (MGP_SPRETEiJ_G0027582)	Hmgn2 (MGP_SPRETEiJ_G0027581)	Rps6ka1 (MGP_SPRETEiJ_G0027580)	Arid1a (MGP_SPRETEiJ_G0027579)	Pigv (MGP_SPRETEiJ_G0027578)	Zdhhc18 (MGP_SPRETEiJ_G0027577)	Gpn2 (MGP_SPRETEiJ_G0027576)	Gpatch3 (MGP_SPRETEiJ_G0027575)	Nr0b2 (MGP_SPRETEiJ_G0027574)	Nudc (MGP_SPRETEiJ_G0027573)	Kdf1 (MGP_SPRETEiJ_G0027572)	Trnp1 (MGP_SPRETEiJ_G0027571)	Tent5b (MGP_SPRETEiJ_G0027570) #19	Slc9a1 (MGP_SPRETEiJ_G0027569) #21	Wdtc1 (MGP_SPRETEiJ_G0027568) #22	Tmem222 (MGP_SPRETEiJ_G0027567) #23	Sytl1 (MGP_SPRETEiJ_G0027566) #24	Map3k6 (MGP_SPRETEiJ_G0027565) #25	Cd164l2 (MGP_SPRETEiJ_G0027564) #26	Gpr3 (MGP_SPRETEiJ_G0027563) #27	Wasf2 (MGP_SPRETEiJ_G0027562) #28	Ahdc1 (MGP_SPRETEiJ_G0027561) #29	Fgr (MGP_SPRETEiJ_G0027560) #30	Fam76a (MGP_SPRETEiJ_G0027559) #32	Stx12 (MGP_SPRETEiJ_G0027558) #33	Ppp1r8 (MGP_SPRETEiJ_G0027557) #34	Themis2 (MGP_SPRETEiJ_G0027556)	Rpa2 (MGP_SPRETEiJ_G0027555)	Smpdl3b (MGP_SPRETEiJ_G0027554)	Xkr8 (MGP_SPRETEiJ_G0027553)
Steppe mouse	MODERN SPECIES	3343	Arid1a (ENSMSIG00000000334)	Pigv (ENSMSIG00000000284)	ENSMSIG00000000251	Zdhhc18 (ENSMSIG00000000232)	Sfn (ENSMSIG00000000216)	Gpn2 (ENSMSIG00000000141)	Gpatch3 (ENSMSIG00000026503)	Nr0b2 (ENSMSIG00000026492)	Nudc (ENSMSIG00000026485)	ENSMSIG00000026482	Kdf1 (ENSMSIG00000026473)	Trnp1 (ENSMSIG00000026468)	ENSMSIG00000026463	Tent5b (ENSMSIG00000026455) #19	Slc9a1 (ENSMSIG00000026439) #21	Wdtc1 (ENSMSIG00000026410) #22	Tmem222 (ENSMSIG00000026400) #23	ENSMSIG00000026328 #24	Map3k6 (ENSMSIG00000026242) #25	Cd164l2 (ENSMSIG00000026225) #26	Gpr3 (ENSMSIG00000026220) #27	Wasf2 (ENSMSIG00000026175) #28	Ahdc1 (ENSMSIG00000026167) #29
Mouse	MODERN SPECIES	13	Dhdds (ENSMUSG00000012117)	Hmgn2 (ENSMUSG00000003038)	Rps6ka1 (ENSMUSG00000003644)	Arid1a (ENSMUSG00000007880)	Pigv (ENSMUSG00000043257)	Zdhhc18 (ENSMUSG00000037553)	Sfn (ENSMUSG00000047281)	Gpn2 (ENSMUSG00000028848)	Gpatch3 (ENSMUSG00000028850)	Nr0b2 (ENSMUSG00000037583)	Nudc (ENSMUSG00000028851)	Kdf1 (ENSMUSG00000037600)	Trnp1 (ENSMUSG00000056596)	Tent5b (ENSMUSG00000046694) #19	Slc9a1 (ENSMUSG00000028854) #21	Wdtc1 (ENSMUSG00000037622) #22	Tmem222 (ENSMUSG00000028857) #23	Sytl1 (ENSMUSG00000028860) #24	Map3k6 (ENSMUSG00000028862) #25	Cd164l2 (ENSMUSG00000028865) #26	Gpr3 (ENSMUSG00000049649) #27	Wasf2 (ENSMUSG00000028868) #28	Ahdc1 (ENSMUSG00000037692) #29	Fgr (ENSMUSG00000028874) #30	Fam76a (ENSMUSG00000028878) #32	Stx12 (ENSMUSG00000028879) #33	Ppp1r8 (ENSMUSG00000028882) #34	Themis2 (ENSMUSG00000037731)	Rpa2 (ENSMUSG00000028884)	Smpdl3b (ENSMUSG00000028885)	Xkr8 (ENSMUSG00000037752)
Ryukyu mouse	MODERN SPECIES	13	Dhdds (MGP_CAROLIEiJ_G0026602)	MGP_CAROLIEiJ_G0026601	Rps6ka1 (MGP_CAROLIEiJ_G0026600)	Arid1a (MGP_CAROLIEiJ_G0026599)	Pigv (MGP_CAROLIEiJ_G0026598)	Zdhhc18 (MGP_CAROLIEiJ_G0026597)	Sfn (MGP_CAROLIEiJ_G0026596)	Gpn2 (MGP_CAROLIEiJ_G0026595)	Gpatch3 (MGP_CAROLIEiJ_G0026594)	Nr0b2 (MGP_CAROLIEiJ_G0026593)	Nudc (MGP_CAROLIEiJ_G0026592)	Kdf1 (MGP_CAROLIEiJ_G0026591)	Trnp1 (MGP_CAROLIEiJ_G0026590)	Tent5b (MGP_CAROLIEiJ_G0026589) #19	Slc9a1 (MGP_CAROLIEiJ_G0026588) #21	Wdtc1 (MGP_CAROLIEiJ_G0026587) #22	Tmem222 (MGP_CAROLIEiJ_G0026586) #23	Sytl1 (MGP_CAROLIEiJ_G0026585) #24	Map3k6 (MGP_CAROLIEiJ_G0026584) #25	Cd164l2 (MGP_CAROLIEiJ_G0026583) #26	Gpr3 (MGP_CAROLIEiJ_G0026582) #27	Wasf2 (MGP_CAROLIEiJ_G0026581) #28	Ahdc1 (MGP_CAROLIEiJ_G0026580) #29	Fgr (MGP_CAROLIEiJ_G0026579) #30	Fam76a (MGP_CAROLIEiJ_G0026578) #32	Stx12 (MGP_CAROLIEiJ_G0026577) #33	Ppp1r8 (MGP_CAROLIEiJ_G0026576) #34	Themis2 (MGP_CAROLIEiJ_G0026575)	Rpa2 (MGP_CAROLIEiJ_G0026574)	Smpdl3b (MGP_CAROLIEiJ_G0026573)	Xkr8 (MGP_CAROLIEiJ_G0026572)
Shrew mouse	MODERN SPECIES	19	Dhdds (MGP_PahariEiJ_G0028935)	MGP_PahariEiJ_G0028934	Rps6ka1 (MGP_PahariEiJ_G0028933)	Arid1a (MGP_PahariEiJ_G0028932)	Pigv (MGP_PahariEiJ_G0028931)	MGP_PahariEiJ_G0028930	Sfn (MGP_PahariEiJ_G0028929)	Gpn2 (MGP_PahariEiJ_G0028928)	Gpatch3 (MGP_PahariEiJ_G0028927)	Nr0b2 (MGP_PahariEiJ_G0028926)	Nudc (MGP_PahariEiJ_G0028925)	Kdf1 (MGP_PahariEiJ_G0028924)	Trnp1 (MGP_PahariEiJ_G0028923)	Tent5b (MGP_PahariEiJ_G0028922) #19	Slc9a1 (MGP_PahariEiJ_G0028921) #21	Wdtc1 (MGP_PahariEiJ_G0028920) #22	Tmem222 (MGP_PahariEiJ_G0028919) #23	Sytl1 (MGP_PahariEiJ_G0028918) #24	Map3k6 (MGP_PahariEiJ_G0028917) #25	Cd164l2 (MGP_PahariEiJ_G0028916) #26	Gpr3 (MGP_PahariEiJ_G0028915) #27	Wasf2 (MGP_PahariEiJ_G0028914) #28	Ahdc1 (MGP_PahariEiJ_G0028913) #29	Fgr (MGP_PahariEiJ_G0028912) #30	Fam76a (MGP_PahariEiJ_G0028911) #32	MGP_PahariEiJ_G0028910 #33	Ppp1r8 (MGP_PahariEiJ_G0028909) #34	Themis2 (MGP_PahariEiJ_G0028908)	Rpa2 (MGP_PahariEiJ_G0028907)	Smpdl3b (MGP_PahariEiJ_G0028906)	Xkr8 (MGP_PahariEiJ_G0028905)
Rat	MODERN SPECIES	15	Arid1a (ENSRNOG00000006137)	Pigv (ENSRNOG00000000121)	Zdhhc18 (ENSRNOG00000058156)	Sfn (ENSRNOG00000033153)	Gpn2 (ENSRNOG00000007083)	Gpatch3 (ENSRNOG00000007097)	ENSRNOG00000066253	Nr0b2 (ENSRNOG00000007229)	Nudc (ENSRNOG00000051720)	AC118963.1 (ENSRNOG00000049922)	Kdf1 (ENSRNOG00000055933)	ENSRNOG00000068236	Trnp1 (ENSRNOG00000055936)	Tent5b (ENSRNOG00000056153) #19	Slc9a1 (ENSRNOG00000007982) #21	Wdtc1 (ENSRNOG00000008377) #22	Tmem222 (ENSRNOG00000008564) #23	Map3k6 (ENSRNOG00000008936) #25	Cd164l2 (ENSRNOG00000009505) #26	Sytl1 (ENSRNOG00000008600) #24	Gpr3 (ENSRNOG00000009540) #27	Wasf2 (ENSRNOG00000009805) #28	Ahdc1 (ENSRNOG00000042855) #29	Fgr (ENSRNOG00000009912) #30	Fam76a (ENSRNOG00000011254) #32	Stx12 (ENSRNOG00000011804) #33	Ppp1r8 (ENSRNOG00000059550) #34	Themis2 (ENSRNOG00000012965)	Rpa2 (ENSRNOG00000013005)	Smpdl3b (ENSRNOG00000042326)	Xkr8 (ENSRNOG00000024312)
Cricetidae	ANCESTRAL SPECIES	2	ENSGT00950000182802.B.a.a.a.a.i.b	ENSGT00940000159314	ENSGT00940000155194	ENSGT00390000013174	ENSGT00940000156585	ENSGT01090000260040.b.b.b.a	ENSGT00950000183172.B	ENSGT00390000004191	ENSGT00390000015719.c	ENSGT00940000155361	ENSGT00390000016565	ENSGT00900000143263	ENSGT00390000017418	ENSGT00940000160747 #19	ENSGT00940000156338 #21	ENSGT00950000182900.B #22	ENSGT00390000007371 #23	ENSGT00940000160932 #24	ENSGT00940000159398 #25	ENSGT00530000063929.a.b #26	ENSGT01060000248564.b.a.a.a #27	ENSGT00950000182962.b.a #28	ENSGT00390000018883 #29	ENSGT00940000157554 #30	ENSGT00940000160073 #32	ENSGT01000000214440.A.a.b.a #33	ENSGT00940000156115 #34	ENSGT00530000063770.c.a	ENSGT00390000010045	ENSGT00950000183182.a.a	ENSGT01090000260093.b
Cricetidae_B	ANCESTRAL SPECIES	2	ENSGT00390000007879	ENSGT00950000182802.B.a.a.a.a.i.b	ENSGT00940000159314	ENSGT00940000155194	ENSGT00390000013174	ENSGT00940000156585	ENSGT01090000260040.b.b.b.a	ENSGT00950000183172.B	ENSGT00390000004191	ENSGT00390000015719.c	ENSGT00940000155361	ENSGT00390000016565	ENSGT00390000017418	ENSGT00940000160747 #19	ENSGT00940000156338 #21	ENSGT00950000182900.B #22	ENSGT00390000007371 #23	ENSGT00940000160932 #24	ENSGT00940000159398 #25	ENSGT00530000063929.a.b #26	ENSGT01060000248564.b.a.a.a #27	ENSGT00950000182962.b.a #28	ENSGT00390000018883 #29	ENSGT00940000157554 #30	ENSGT00940000160073 #32	ENSGT01000000214440.A.a.b.a #33	ENSGT00940000156115 #34	ENSGT00530000063770.c.a	ENSGT00390000010045	ENSGT00950000183182.a.a	ENSGT01090000260093.b
Prairie vole	MODERN SPECIES	1	Dhdds (ENSMOCG00000018150)	ENSMOCG00000009477	Rps6ka1 (ENSMOCG00000005121)	Arid1a (ENSMOCG00000015143)	Zdhhc18 (ENSMOCG00000014386)	Pigv (ENSMOCG00000021093)	Sfn (ENSMOCG00000007160)	Gpn2 (ENSMOCG00000016502)	Gpatch3 (ENSMOCG00000022375)	Nr0b2 (ENSMOCG00000022706)	ENSMOCG00000009769	Kdf1 (ENSMOCG00000008803)	Trnp1 (ENSMOCG00000004450)	Tent5b (ENSMOCG00000006029) #19	Slc9a1 (ENSMOCG00000001951) #21	Wdtc1 (ENSMOCG00000021708) #22	Tmem222 (ENSMOCG00000001826) #23	Sytl1 (ENSMOCG00000006535) #24	Map3k6 (ENSMOCG00000022830) #25	Cd164l2 (ENSMOCG00000012161) #26	Gpr3 (ENSMOCG00000014276) #27	Wasf2 (ENSMOCG00000015492) #28	Ahdc1 (ENSMOCG00000016500) #29	Fgr (ENSMOCG00000019562) #30	Fam76a (ENSMOCG00000021395) #32	Stx12 (ENSMOCG00000014196) #33	ENSMOCG00000022691 #34	Themis2 (ENSMOCG00000003168)	Rpa2 (ENSMOCG00000007092)	Smpdl3b (ENSMOCG00000016324)	Xkr8 (ENSMOCG00000002218)
Northern American deer mouse	MODERN SPECIES	11	Hmgn2 (ENSPEMG00000006552)	Rps6ka1 (ENSPEMG00000001640)	Arid1a (ENSPEMG00000009102)	Pigv (ENSPEMG00000000163)	Zdhhc18 (ENSPEMG00000022857)	Sfn (ENSPEMG00000004203)	Gpn2 (ENSPEMG00000020796)	Gpatch3 (ENSPEMG00000020632)	Nr0b2 (ENSPEMG00000020621)	Nudc (ENSPEMG00000020579)	Kdf1 (ENSPEMG00000010418)	ENSPEMG00000020456	ENSPEMG00000024927	Tent5b (ENSPEMG00000026289) #19	Slc9a1 (ENSPEMG00000008998) #21	Wdtc1 (ENSPEMG00000011264) #22	Tmem222 (ENSPEMG00000017489) #23	Sytl1 (ENSPEMG00000011614) #24	Map3k6 (ENSPEMG00000015180) #25	Cd164l2 (ENSPEMG00000013041) #26	Gpr3 (ENSPEMG00000005212) #27	Wasf2 (ENSPEMG00000011815) #28	ENSPEMG00000013859	Ahdc1 (ENSPEMG00000014274) #29	Fgr (ENSPEMG00000000914) #30	ENSPEMG00000014678 #32	Stx12 (ENSPEMG00000025346) #33	Ppp1r8 (ENSPEMG00000003512) #34	Themis2 (ENSPEMG00000008336)	Rpa2 (ENSPEMG00000006270)	Smpdl3b (ENSPEMG00000003316)
Cricetinae	ANCESTRAL SPECIES	5	ENSGT00950000182802.B.a.a.a.a.i.b	ENSGT00940000159314	ENSGT00940000155194	ENSGT00390000013174	ENSGT00940000156585	ENSGT01090000260040.b.b.b.a	ENSGT00950000183172.B	ENSGT00390000004191	ENSGT00390000015719.c	ENSGT00940000155361	ENSGT00390000016565	ENSGT00900000143263	ENSGT00390000017418	ENSGT00940000160747 #19	ENSGT00940000156338 #21	ENSGT00950000182900.B #22	ENSGT00390000007371 #23	ENSGT00940000160932 #24	ENSGT00940000159398 #25	ENSGT00530000063929.a.b #26	ENSGT01060000248564.b.a.a.a #27	ENSGT00950000182962.b.a #28	ENSGT00390000018883 #29	ENSGT00940000157554 #30	ENSGT00940000160073 #32	ENSGT01000000214440.A.a.b.a #33	ENSGT00940000156115 #34	ENSGT00530000063770.c.a	ENSGT00390000010045	ENSGT00950000183182.a.a	ENSGT01090000260093.b
Chinese hamster chok1gshd	MODERN SPECIES	111	Hmgn2 (ENSCGRG00001020969)	Rps6ka1 (ENSCGRG00001024951)	Arid1a (ENSCGRG00001022343)	Pigv (ENSCGRG00001013693)	Zdhhc18 (ENSCGRG00001024788)	Sfn (ENSCGRG00001008371)	Gpn2 (ENSCGRG00001023875)	Gpatch3 (ENSCGRG00001002930)	Nr0b2 (ENSCGRG00001020066)	ENSCGRG00001022208	Kdf1 (ENSCGRG00001003180)	ENSCGRG00001022474	Trnp1 (ENSCGRG00001024587)	Tent5b (ENSCGRG00001024770) #19	Slc9a1 (ENSCGRG00001002747) #21	Wdtc1 (ENSCGRG00001015126) #22	Tmem222 (ENSCGRG00001020116) #23	Sytl1 (ENSCGRG00001013995) #24	Map3k6 (ENSCGRG00001019547) #25	Cd164l2 (ENSCGRG00001024895) #26	Gpr3 (ENSCGRG00001001244) #27	Wasf2 (ENSCGRG00001020852) #28	Ahdc1 (ENSCGRG00001012820) #29	Fgr (ENSCGRG00001024485) #30	ENSCGRG00001007863 #32	Stx12 (ENSCGRG00001016934) #33	Ppp1r8 (ENSCGRG00001019839) #34	Themis2 (ENSCGRG00001024729)	Rpa2 (ENSCGRG00001007332)	Smpdl3b (ENSCGRG00001016883)	Xkr8 (ENSCGRG00001017118)
Golden Hamster	MODERN SPECIES	709	Hmgn2-ps (ENSMAUG00000017301)	Rps6ka1 (ENSMAUG00000017784)	ENSMAUG00000004576	ENSMAUG00000020343	Pigv (ENSMAUG00000020277)	Zdhhc18 (ENSMAUG00000011253)	Sfn (ENSMAUG00000008489)	Gpn2 (ENSMAUG00000013057)	Gpatch3 (ENSMAUG00000002005)	Nr0b2 (ENSMAUG00000020860)	Nudc (ENSMAUG00000008166)	Kdf1 (ENSMAUG00000021929)	Trnp1 (ENSMAUG00000019939)	Tent5b (ENSMAUG00000014675) #19	ENSMAUG00000001078 #21	Wdtc1 (ENSMAUG00000004693) #22	Tmem222 (ENSMAUG00000007829) #23	Sytl1 (ENSMAUG00000018014) #24	Map3k6 (ENSMAUG00000017302) #25	ENSMAUG00000011191	Gpr3 (ENSMAUG00000014246) #27	Wasf2 (ENSMAUG00000012124) #28	Ahdc1 (ENSMAUG00000013108) #29	Fgr (ENSMAUG00000006765) #30	Fam76a (ENSMAUG00000016561) #32	Stx12 (ENSMAUG00000016314) #33	Ppp1r8 (ENSMAUG00000009797) #34	Themis2 (ENSMAUG00000000821)	Rpa2 (ENSMAUG00000002825)	Smpdl3b (ENSMAUG00000014184)	Xkr8 (ENSMAUG00000009395)
Lesser Egyptian jerboa	MODERN SPECIES	201	Lin28a (ENSJJAG00000018806)	Dhdds (ENSJJAG00000020279)	ENSJJAG00000020754	Rps6ka1 (ENSJJAG00000000276)	Arid1a (ENSJJAG00000018018)	Pigv (ENSJJAG00000019530)	Zdhhc18 (ENSJJAG00000021450)	Sfn (ENSJJAG00000012903)	Gpn2 (ENSJJAG00000022134)	Gpatch3 (ENSJJAG00000003292)	Nr0b2 (ENSJJAG00000012389)	Nudc (ENSJJAG00000017209)	Kdf1 (ENSJJAG00000017615)	ENSJJAG00000017789 #19	Slc9a1 (ENSJJAG00000019281) #21	Wdtc1 (ENSJJAG00000021957) #22	Tmem222 (ENSJJAG00000002275) #23	Sytl1 (ENSJJAG00000011352) #24	Map3k6 (ENSJJAG00000020163) #25	ENSJJAG00000014104	Cd164l2 (ENSJJAG00000014470) #26	Gpr3 (ENSJJAG00000018961) #27	Wasf2 (ENSJJAG00000019149) #28	Ahdc1 (ENSJJAG00000019425) #29	Fgr (ENSJJAG00000019812) #30	ENSJJAG00000002452 #32	Stx12 (ENSJJAG00000004079) #33	ENSJJAG00000010784 #34	Themis2 (ENSJJAG00000012926)	ENSJJAG00000014579	Smpdl3b (ENSJJAG00000015036)
Kangaroo rat	MODERN SPECIES	325	Dhdds (ENSDORG00000001776)	Hmgn2 (ENSDORG00000001787)	Rps6ka1 (ENSDORG00000007099)	Arid1a (ENSDORG00000002442)	Pigv (ENSDORG00000008243)	Zdhhc18 (ENSDORG00000012486)	Sfn (ENSDORG00000012487)	Gpn2 (ENSDORG00000005203)	ENSDORG00000005205	Nr0b2 (ENSDORG00000023804)	Nudc (ENSDORG00000026035)	Kdf1 (ENSDORG00000023459)	ENSDORG00000030030	Tent5b (ENSDORG00000015648) #19	Slc9a1 (ENSDORG00000012211) #21	Wdtc1 (ENSDORG00000012982) #22	Tmem222 (ENSDORG00000009464) #23	Sytl1 (ENSDORG00000009466) #24	Map3k6 (ENSDORG00000009469) #25	ENSDORG00000009474	Cd164l2 (ENSDORG00000009477) #26	Gpr3 (ENSDORG00000007347) #27	Wasf2 (ENSDORG00000007346) #28	Ahdc1 (ENSDORG00000010729) #29	Fgr (ENSDORG00000015238) #30	Fam76a (ENSDORG00000000575) #32	Stx12 (ENSDORG00000001059) #33	ENSDORG00000025172 #34	Themis2 (ENSDORG00000003740)	Rpa2 (ENSDORG00000003741)	Smpdl3b (ENSDORG00000015612)
Rodentia_A	ANCESTRAL SPECIES		ENSGT00950000182802.B.a.a.a.a.i.b	ENSGT00940000159314	ENSGT00940000155194	ENSGT00390000013174	ENSGT00940000156585	ENSGT01090000260040.b.b.b.a	ENSGT00950000183172.B	ENSGT00390000004191	ENSGT00390000015719.c	ENSGT00940000155361	ENSGT00390000016565	ENSGT00900000143263	ENSGT00390000017418	ENSGT00940000160747 #19	ENSGT00940000156338 #21	ENSGT00950000182900.B #22	ENSGT00390000007371 #23	ENSGT00940000160932 #24	ENSGT00940000159398 #25	ENSGT00940000163188	ENSGT00530000063929.a.b #26	ENSGT01060000248564.b.a.a.a #27	ENSGT00950000182962.b.a #28	ENSGT00390000018883 #29	ENSGT00940000157554 #30	ENSGT00940000160073 #32	ENSGT01000000214440.A.a.b.a #33	ENSGT00940000156115 #34	ENSGT00530000063770.c.a	ENSGT00390000010045	ENSGT00950000183182.a.a
Hystricomorpha	ANCESTRAL SPECIES	4	ENSGT00390000007879	ENSGT00950000182802.B.a.a.a.a.i.b	ENSGT00940000159314	ENSGT00940000155194	ENSGT00390000013174	ENSGT00940000156585	ENSGT01090000260040.b.b.b.a	ENSGT00950000183172.B	ENSGT00390000004191	ENSGT00390000015719.c	ENSGT00940000155361	ENSGT00390000016565	ENSGT00390000017418	ENSGT00940000160747 #19	ENSGT00940000156338 #21	ENSGT00950000182900.B #22	ENSGT00390000007371 #23	ENSGT00940000160932 #24	ENSGT00940000159398 #25	ENSGT00940000163188	ENSGT00530000063929.a.b #26	ENSGT01060000248564.b.a.a.a #27	ENSGT00950000182962.b.a #28	ENSGT00390000018883 #29	ENSGT00940000157554 #30	ENSGT00940000160073 #32	ENSGT01000000214440.A.a.b.a #33	ENSGT00940000156115 #34	ENSGT00530000063770.c.a	ENSGT00390000010045	ENSGT00950000183182.a.a
Hystricomorpha_a	ANCESTRAL SPECIES	1	ENSGT00390000007879	ENSGT00950000182802.B.a.a.a.a.i.b	ENSGT00940000159314	ENSGT00940000155194	ENSGT00390000013174	ENSGT00940000156585	ENSGT01090000260040.b.b.b.a	ENSGT00950000183172.B	ENSGT00390000004191	ENSGT00390000015719.c	ENSGT00940000155361	ENSGT00390000016565	ENSGT00390000017418	ENSGT00940000160747 #19	ENSGT00940000156338 #21	ENSGT00950000182900.B #22	ENSGT00390000007371 #23	ENSGT00940000160932 #24	ENSGT00940000159398 #25	ENSGT00530000063929.a.b #26	ENSGT01060000248564.b.a.a.a #27	ENSGT00950000182962.b.a #28	ENSGT00390000018883 #29	ENSGT00940000157554 #30	ENSGT00940000160073 #32	ENSGT01000000214440.A.a.b.a #33	ENSGT00940000156115 #34	ENSGT00530000063770.c.a	ENSGT00390000010045	ENSGT00950000183182.a.a	ENSGT01090000260093.b
Hystricomorpha_b	ANCESTRAL SPECIES	7	ENSGT00390000007879	ENSGT00950000182802.B.a.a.a.a.i.b	ENSGT00940000159314	ENSGT00940000155194	ENSGT00390000013174	ENSGT00940000156585	ENSGT01090000260040.b.b.b.a	ENSGT00950000183172.B	ENSGT00390000004191	ENSGT00390000015719.c	ENSGT00940000155361	ENSGT00390000016565	ENSGT00390000017418	ENSGT00940000160747 #19	ENSGT00940000156338 #21	ENSGT00950000182900.B #22	ENSGT00390000007371 #23	ENSGT00940000160932 #24	ENSGT00940000159398 #25	ENSGT00940000163188	ENSGT00530000063929.a.b #26	ENSGT01060000248564.b.a.a.a #27	ENSGT00950000182962.b.a #28	ENSGT00390000018883 #29	ENSGT00940000157554 #30	ENSGT00940000160073 #32	ENSGT01000000214440.A.a.b.a #33	ENSGT00940000156115 #34	ENSGT00530000063770.c.a	ENSGT00390000010045	ENSGT00950000183182.a.a
Degu	MODERN SPECIES	204	RPS6KA1 (ENSODEG00000005545)	ENSODEG00000005573	ARID1A (ENSODEG00000005639)	PIGV (ENSODEG00000005864)	ZDHHC18 (ENSODEG00000003193)	ENSODEG00000018988	GPN2 (ENSODEG00000003267)	GPATCH3 (ENSODEG00000003292)	NR0B2 (ENSODEG00000003311)	ENSODEG00000003339	ENSODEG00000003581	TRNP1 (ENSODEG00000003604)	TENT5B (ENSODEG00000003616) #19	SLC9A1 (ENSODEG00000003659) #21	ENSODEG00000003743	WDTC1 (ENSODEG00000003804) #22	TMEM222 (ENSODEG00000003675) #23	SYTL1 (ENSODEG00000003707) #24	MAP3K6 (ENSODEG00000004172) #25	CD164L2 (ENSODEG00000004416) #26	GPR3 (ENSODEG00000004543) #27	WASF2 (ENSODEG00000003793) #28	AHDC1 (ENSODEG00000019150) #29	FGR (ENSODEG00000004016) #30	ENSODEG00000019010	FAM76A (ENSODEG00000004142) #32	ENSODEG00000019037	STX12 (ENSODEG00000004182) #33	PPP1R8 (ENSODEG00000004352) #34	ENSODEG00000004373	THEMIS2 (ENSODEG00000004403)
Long-tailed chinchilla	MODERN SPECIES	159	LIN28A (ENSCLAG00000013508)	DHDDS (ENSCLAG00000009304)	HMGN2 (ENSCLAG00000008674)	RPS6KA1 (ENSCLAG00000012043)	ARID1A (ENSCLAG00000008499)	PIGV (ENSCLAG00000011353)	ZDHHC18 (ENSCLAG00000015099)	SFN (ENSCLAG00000018088)	GPN2 (ENSCLAG00000015368)	GPATCH3 (ENSCLAG00000012064)	NR0B2 (ENSCLAG00000012438)	NUDC (ENSCLAG00000008191)	KDF1 (ENSCLAG00000009636)	TENT5B (ENSCLAG00000010180) #19	SLC9A1 (ENSCLAG00000011250) #21	WDTC1 (ENSCLAG00000012710) #22	TMEM222 (ENSCLAG00000014379) #23	SYTL1 (ENSCLAG00000011750) #24	MAP3K6 (ENSCLAG00000015178) #25	FCN3 (ENSCLAG00000010084)	GPR3 (ENSCLAG00000012893) #27	WASF2 (ENSCLAG00000013958) #28	AHDC1 (ENSCLAG00000013754) #29	FGR (ENSCLAG00000014147) #30	FAM76A (ENSCLAG00000008844) #32	STX12 (ENSCLAG00000013795) #33	PPP1R8 (ENSCLAG00000011211) #34	THEMIS2 (ENSCLAG00000012140)	RPA2 (ENSCLAG00000010772)	SMPDL3B (ENSCLAG00000011768)	XKR8 (ENSCLAG00000011287)
Guinea pig	MODERN SPECIES	25	DHDDS (ENSCPOG00000008087)	HMGN2 (ENSCPOG00000039945)	RPS6KA1 (ENSCPOG00000003945)	ENSCPOG00000021806	ARID1A (ENSCPOG00000010387)	ENSCPOG00000033509	ZDHHC18 (ENSCPOG00000010395)	SFN (ENSCPOG00000035257)	GPN2 (ENSCPOG00000002848)	GPATCH3 (ENSCPOG00000010404)	NR0B2 (ENSCPOG00000010409)	NUDC (ENSCPOG00000010413)	KDF1 (ENSCPOG00000022999)	TENT5B (ENSCPOG00000032542) #19	SLC9A1 (ENSCPOG00000035897) #21	WDTC1 (ENSCPOG00000012347) #22	TMEM222 (ENSCPOG00000020198) #23	SYTL1 (ENSCPOG00000012354) #24	MAP3K6 (ENSCPOG00000012359) #25	CD164L2 (ENSCPOG00000022092) #26	GPR3 (ENSCPOG00000027123) #27	WASF2 (ENSCPOG00000012376) #28	AHDC1 (ENSCPOG00000022607) #29	FGR (ENSCPOG00000015092) #30	ENSCPOG00000031828	FAM76A (ENSCPOG00000006186) #32	STX12 (ENSCPOG00000013160) #33	PPP1R8 (ENSCPOG00000036078) #34	THEMIS2 (ENSCPOG00000033796)	RPA2 (ENSCPOG00000008766)	SMPDL3B (ENSCPOG00000008773)
Naked mole-rat female	MODERN SPECIES	26	ENSHGLG00000033713	ARID1A (ENSHGLG00000010530)	PIGV (ENSHGLG00000019195)	ZDHHC18 (ENSHGLG00000018702)	SFN (ENSHGLG00000033145)	GPN2 (ENSHGLG00000012257)	GPATCH3 (ENSHGLG00000012492)	NR0B2 (ENSHGLG00000032117)	NUDC (ENSHGLG00000011404)	KDF1 (ENSHGLG00000012217)	TRNP1 (ENSHGLG00000041801)	TENT5B (ENSHGLG00000034048) #19	ENSHGLG00000047714	SLC9A1 (ENSHGLG00000036829) #21	ENSHGLG00000044722	WDTC1 (ENSHGLG00000013846) #22	ENSHGLG00000007610	TMEM222 (ENSHGLG00000011121) #23	SYTL1 (ENSHGLG00000011880) #24	MAP3K6 (ENSHGLG00000012888) #25	FCN3 (ENSHGLG00000012337)	ENSHGLG00000013863 #26	GPR3 (ENSHGLG00000046961) #27	WASF2 (ENSHGLG00000048286) #28	AHDC1 (ENSHGLG00000014470) #29	FGR (ENSHGLG00000018738) #30	FAM76A (ENSHGLG00000009747) #32	ENSHGLG00000014326 #34	THEMIS2 (ENSHGLG00000019146)	RPA2 (ENSHGLG00000018528)	SMPDL3B (ENSHGLG00000012112)
Sciuridae	ANCESTRAL SPECIES	3	ENSGT00950000182802.B.a.b.s	ENSGT00940000159314	ENSGT00940000155194	ENSGT00390000013174	ENSGT00940000156585	ENSGT01090000260040.b.b.b.a	ENSGT00950000183172.B	ENSGT00390000004191	ENSGT00390000015719.c	ENSGT00940000155361	ENSGT00390000016565	ENSGT00900000143263	ENSGT00390000017418	ENSGT00940000160747 #19	ENSGT00940000156338 #21	ENSGT00950000182900.B #22	ENSGT00390000007371 #23	ENSGT00940000160932 #24	ENSGT00940000159398 #25	ENSGT00530000063929.a.b #26	ENSGT01060000248564.b.a.a.a #27	ENSGT00950000182962.b.a #28	ENSGT00390000018883 #29	ENSGT00940000157554 #30	ENSGT00940000160073 #32	ENSGT01000000214440.A.a.b.a #33	ENSGT00940000156115 #34	ENSGT00530000063770.c.a	ENSGT00390000010045	ENSGT00950000183182.a.a	ENSGT01090000260093.b
Marmotini	ANCESTRAL SPECIES		ENSGT00950000182802.B.a.a.a.a.i.b	ENSGT00940000159314	ENSGT00940000155194	ENSGT00390000013174	ENSGT00940000156585	ENSGT01090000260040.b.b.b.a	ENSGT00950000183172.B	ENSGT00390000004191	ENSGT00390000015719.c	ENSGT00940000155361	ENSGT00390000016565	ENSGT00900000143263	ENSGT00390000017418	ENSGT00940000160747 #19	ENSGT00940000156338 #21	ENSGT00950000182900.B #22	ENSGT00390000007371 #23	ENSGT00940000160932 #24	ENSGT00940000159398 #25	ENSGT00530000063929.a.b #26	ENSGT01060000248564.b.a.a.a #27	ENSGT00950000182962.b.a #28	ENSGT00390000018883 #29	ENSGT00940000157554 #30	ENSGT00940000160073 #32	ENSGT01000000214440.A.a.b.a #33	ENSGT00960000190607	ENSGT00940000156115 #34	ENSGT00530000063770.c.a	ENSGT00390000010045	ENSGT00950000183182.a.a
Alpin marmot	MODERN SPECIES	15	RPS6KA1 (ENSMMMG00000013808)	ARID1A (ENSMMMG00000013767)	PIGV (ENSMMMG00000013753)	ZDHHC18 (ENSMMMG00000013731)	SFN (ENSMMMG00000013728)	ENSMMMG00000013725	ENSMMMG00000013717	GPATCH3 (ENSMMMG00000013707)	NR0B2 (ENSMMMG00000013702)	NUDC (ENSMMMG00000013689)	KDF1 (ENSMMMG00000013677)	ENSMMMG00000013673	TRNP1 (ENSMMMG00000013667)	TENT5B (ENSMMMG00000013661) #19	SLC9A1 (ENSMMMG00000013639) #21	WDTC1 (ENSMMMG00000013616) #22	TMEM222 (ENSMMMG00000013607) #23	SYTL1 (ENSMMMG00000013574) #24	MAP3K6 (ENSMMMG00000013538) #25	CD164L2 (ENSMMMG00000013519) #26	GPR3 (ENSMMMG00000013517) #27	WASF2 (ENSMMMG00000013504) #28	FGR (ENSMMMG00000013453) #30	FAM76A (ENSMMMG00000013430) #32	STX12 (ENSMMMG00000013420) #33	ENSMMMG00000013416	PPP1R8 (ENSMMMG00000013396) #34	THEMIS2 (ENSMMMG00000013395)	RPA2 (ENSMMMG00000013382)	SMPDL3B (ENSMMMG00000013366)	XKR8 (ENSMMMG00000013348)
Marmotini_b	ANCESTRAL SPECIES		ENSGT00390000007879	ENSGT00950000182802.B.a.a.a.a.i.b	ENSGT00940000159314	ENSGT00940000155194	ENSGT00390000013174	ENSGT00940000156585	ENSGT01090000260040.b.b.b.a	ENSGT00950000183172.B	ENSGT00390000004191	ENSGT00390000015719.c	ENSGT00940000155361	ENSGT00390000016565	ENSGT00390000017418	ENSGT00940000160747 #19	ENSGT00940000156338 #21	ENSGT00950000182900.B #22	ENSGT00390000007371 #23	ENSGT00940000160932 #24	ENSGT00940000159398 #25	ENSGT00530000063929.a.b #26	ENSGT01060000248564.b.a.a.a #27	ENSGT00950000182962.b.a #28	ENSGT00390000018883 #29	ENSGT00940000157554 #30	ENSGT00940000160073 #32	ENSGT01000000214440.A.a.b.a #33	ENSGT00960000190607	ENSGT00940000156115 #34	ENSGT00530000063770.c.a	ENSGT00390000010045	ENSGT00950000183182.a.a
Squirrel	MODERN SPECIES	74	RPS6KA1 (ENSSTOG00000004355)	ENSSTOG00000022501	ENSSTOG00000031355	PIGV (ENSSTOG00000021148)	ZDHHC18 (ENSSTOG00000015208)	SFN (ENSSTOG00000015213)	GPN2 (ENSSTOG00000015216)	GPATCH3 (ENSSTOG00000015220)	NR0B2 (ENSSTOG00000024249)	NUDC (ENSSTOG00000021201)	KDF1 (ENSSTOG00000015233)	TENT5B (ENSSTOG00000022787) #19	ENSSTOG00000021677	ENSSTOG00000025429	SLC9A1 (ENSSTOG00000009815) #21	WDTC1 (ENSSTOG00000014225) #22	TMEM222 (ENSSTOG00000014234) #23	SYTL1 (ENSSTOG00000014242) #24	MAP3K6 (ENSSTOG00000014251) #25	CD164L2 (ENSSTOG00000024078) #26	GPR3 (ENSSTOG00000024790) #27	WASF2 (ENSSTOG00000003138) #28	AHDC1 (ENSSTOG00000025025) #29	FGR (ENSSTOG00000026717) #30	FAM76A (ENSSTOG00000004331) #32	STX12 (ENSSTOG00000019943) #33	PPP1R8 (ENSSTOG00000004381) #34	THEMIS2 (ENSSTOG00000034218)	RPA2 (ENSSTOG00000004433)	SMPDL3B (ENSSTOG00000004468)	XKR8 (ENSSTOG00000023254)
Arctic ground squirrel	MODERN SPECIES	92	RPS6KA1 (ENSUPAG00010021318)	ARID1A (ENSUPAG00010021300)	PIGV (ENSUPAG00010021291)	ZDHHC18 (ENSUPAG00010021282)	SFN (ENSUPAG00010021279)	GPN2 (ENSUPAG00010021274)	GPATCH3 (ENSUPAG00010021268)	NR0B2 (ENSUPAG00010021267)	NUDC (ENSUPAG00010021264)	KDF1 (ENSUPAG00010021258)	ENSUPAG00010021256	TRNP1 (ENSUPAG00010021254)	TENT5B (ENSUPAG00010021251) #19	ENSUPAG00010021249	SLC9A1 (ENSUPAG00010021229) #21	WDTC1 (ENSUPAG00010021189) #22	TMEM222 (ENSUPAG00010021173) #23	SYTL1 (ENSUPAG00010021146) #24	MAP3K6 (ENSUPAG00010021121) #25	CD164L2 (ENSUPAG00010021117) #26	GPR3 (ENSUPAG00010021112) #27	WASF2 (ENSUPAG00010021099) #28	AHDC1 (ENSUPAG00010021095) #29	FGR (ENSUPAG00010021065) #30	FAM76A (ENSUPAG00010021053) #32	STX12 (ENSUPAG00010021044) #33	ENSUPAG00010021039	PPP1R8 (ENSUPAG00010021025) #34	THEMIS2 (ENSUPAG00010021016)	SMPDL3B (ENSUPAG00010021005)	XKR8 (ENSUPAG00010020998)
Eurasian red squirrel	MODERN SPECIES		PIGV (ENSSVLG00005002744)	ZDHHC18 (ENSSVLG00005002759)	SFN (ENSSVLG00005002779)	GPN2 (ENSSVLG00005002789)	ENSSVLG00005002815	ENSSVLG00005002838	ENSSVLG00005002863	NR0B2 (ENSSVLG00005002872)	NUDC (ENSSVLG00005002888)	KDF1 (ENSSVLG00005002908)	ENSSVLG00005002925	TRNP1 (ENSSVLG00005002944)	TENT5B (ENSSVLG00005002952) #19	ENSSVLG00005002968	SLC9A1 (ENSSVLG00005002990) #21	WDTC1 (ENSSVLG00005003051) #22	TMEM222 (ENSSVLG00005003203) #23	SYTL1 (ENSSVLG00005003264) #24	MAP3K6 (ENSSVLG00005003393) #25	CD164L2 (ENSSVLG00005003518) #26	GPR3 (ENSSVLG00005003531) #27	WASF2 (ENSSVLG00005003551) #28	FGR (ENSSVLG00005003584) #30	FAM76A (ENSSVLG00005010519) #32	ENSSVLG00005010611	STX12 (ENSSVLG00005010643) #33	PPP1R8 (ENSSVLG00005010667) #34	THEMIS2 (ENSSVLG00005010773)	RPA2 (ENSSVLG00005010920)	SMPDL3B (ENSSVLG00005011082)	XKR8 (ENSSVLG00005011375)