Vertebrata	ANCESTRAL SPECIES																	ENSGT00950000182900.B #22
Gnathostomata	ANCESTRAL SPECIES	191														ENSGT00940000160932 #24	ENSGT00940000156338 #21	ENSGT00950000182900.B #22	ENSGT00390000016565	ENSGT00940000155361	ENSGT00390000015719.c	ENSGT00390000004191	ENSGT00950000183172.B	ENSGT00940000156585	ENSGT00390000013174	ENSGT00940000155194	ENSGT00390000007879	ENSGT00950000183056.A.a	ENSGT00940000158412
Euteleostomi	ANCESTRAL SPECIES	321																ENSGT00950000182900.B #22	ENSGT00390000007371 #23	ENSGT00940000154868.a.b	ENSGT00390000016565	ENSGT00940000155361	ENSGT00390000015719.c	ENSGT00390000004191	ENSGT00950000183172.B	ENSGT00940000156585	ENSGT00390000013174	ENSGT00940000155194	ENSGT00950000182802.B	ENSGT00390000007879
Sarcopterygii	ANCESTRAL SPECIES	55	ENSGT00940000156072	ENSGT00940000156529	ENSGT00940000158412	ENSGT00950000183056.A.a	ENSGT00530000067301	ENSGT00940000159599	ENSGT00940000161879	ENSGT00940000155194	ENSGT00390000013174	ENSGT00940000156585	ENSGT00950000183172.B	ENSGT00390000004191	ENSGT00390000015719.c	ENSGT00940000155361	ENSGT00390000016565	ENSGT00950000182900.B #22	ENSGT00390000007371 #23	ENSGT00940000154868.a.b	ENSGT00940000160932 #24	ENSGT00940000156338 #21	ENSGT01060000248564.b.a.a.a #27	ENSGT00950000182962.b.a #28	ENSGT00390000018883 #29	ENSGT00940000157554 #30	ENSGT00940000163923	ENSGT00940000160073 #32	ENSGT00950000183168.B.a	ENSGT00390000003312	ENSGT00940000157582	ENSGT00940000155543	ENSGT00940000157669
Tetrapoda	ANCESTRAL SPECIES	38	ENSGT00940000154798.b	ENSGT00390000007879	ENSGT00950000182802.B	ENSGT00940000159314	ENSGT00940000155194	ENSGT00390000013174	ENSGT00940000156585	ENSGT00950000183172.B	ENSGT00390000004191	ENSGT00390000015719.c	ENSGT00940000155361	ENSGT00390000016565	ENSGT00960000189819	ENSGT00940000160747 #19	ENSGT00940000156338 #21	ENSGT00950000182900.B #22	ENSGT00390000007371 #23	ENSGT00940000154868.a.b	ENSGT00940000160932 #24	ENSGT00940000159398 #25	ENSGT00940000157531	ENSGT01060000248564.b.a.a.a #27	ENSGT00950000182962.b.a #28	ENSGT00390000018883 #29	ENSGT00940000157554 #30	ENSGT00940000163923	ENSGT00940000160073 #32	ENSGT00950000183168.B.a	ENSGT00390000003312	ENSGT00940000157582	ENSGT00940000155543
Amniota	ANCESTRAL SPECIES	35	ENSGT00390000007879	ENSGT00950000182802.B	ENSGT00940000159314	ENSGT00940000155194	ENSGT00390000013174	ENSGT00940000156585	ENSGT01090000260040.b.b.b.a	ENSGT00950000183172.B	ENSGT00390000004191	ENSGT00390000015719.c	ENSGT00940000155361	ENSGT00390000016565	ENSGT00390000017418	ENSGT00940000160747 #19	ENSGT00940000156338 #21	ENSGT00950000182900.B #22	ENSGT00390000007371 #23	ENSGT00940000154868.a.b	ENSGT00940000160932 #24	ENSGT00940000159398 #25	ENSGT00530000063929.a.b #26	ENSGT01060000248564.b.a.a.a #27	ENSGT00950000182962.b.a #28	ENSGT00390000018883 #29	ENSGT00940000157554 #30	ENSGT00940000163923	ENSGT00940000160073 #32
Mammalia	ANCESTRAL SPECIES	19	ENSGT00390000007879	ENSGT00950000182802.B	ENSGT00940000159314	ENSGT00940000155194	ENSGT00390000013174	ENSGT00940000156585	ENSGT01090000260040.b.b.b.a	ENSGT00950000183172.B	ENSGT00390000004191	ENSGT00390000015719.c	ENSGT00940000155361	ENSGT00390000016565	ENSGT00390000017418	ENSGT00940000160747 #19	ENSGT00940000156338 #21	ENSGT00950000182900.B #22	ENSGT00390000007371 #23	ENSGT00940000160932 #24	ENSGT00940000159398 #25	ENSGT00530000063929.a.b #26	ENSGT01060000248564.b.a.a.a #27	ENSGT00950000182962.b.a #28	ENSGT00390000018883 #29	ENSGT00940000157554 #30	ENSGT00940000163923	ENSGT00940000160073 #32	ENSGT01000000214440.A.a.b.a #33	ENSGT00940000156115 #34	ENSGT00530000063770.c.a	ENSGT00390000010045	ENSGT00950000183182.a.a
Theria	ANCESTRAL SPECIES	16	ENSGT00390000007879	ENSGT00950000182802.B.a.a	ENSGT00940000159314	ENSGT00940000155194	ENSGT00390000013174	ENSGT00940000156585	ENSGT01090000260040.b.b.b.a	ENSGT00950000183172.B	ENSGT00390000004191	ENSGT00390000015719.c	ENSGT00940000155361	ENSGT00390000016565	ENSGT00390000017418	ENSGT00940000160747 #19	ENSGT00940000156338 #21	ENSGT00950000182900.B #22	ENSGT00390000007371 #23	ENSGT00940000160932 #24	ENSGT00940000159398 #25	ENSGT00940000163188	ENSGT00530000063929.a.b #26	ENSGT01060000248564.b.a.a.a #27	ENSGT00950000182962.b.a #28	ENSGT00390000018883 #29	ENSGT00940000157554 #30	ENSGT00940000160073 #32	ENSGT01000000214440.A.a.b.a #33	ENSGT00940000156115 #34	ENSGT00530000063770.c.a	ENSGT00390000010045	ENSGT00950000183182.a.a
Eutheria	ANCESTRAL SPECIES		ENSGT00390000007879	ENSGT00950000182802.B.a.a.a.a	ENSGT00940000159314	ENSGT00940000155194	ENSGT00390000013174	ENSGT00940000156585	ENSGT01090000260040.b.b.b.a	ENSGT00950000183172.B	ENSGT00390000004191	ENSGT00390000015719.c	ENSGT00940000155361	ENSGT00390000016565	ENSGT00390000017418	ENSGT00940000160747 #19	ENSGT00940000156338 #21	ENSGT00950000182900.B #22	ENSGT00390000007371 #23	ENSGT00940000160932 #24	ENSGT00940000159398 #25	ENSGT00940000163188	ENSGT00530000063929.a.b #26	ENSGT01060000248564.b.a.a.a #27	ENSGT00950000182962.b.a #28	ENSGT00390000018883 #29	ENSGT00940000157554 #30	ENSGT00940000163178	ENSGT00940000160073 #32	ENSGT01000000214440.A.a.b.a #33	ENSGT00940000156115 #34	ENSGT00530000063770.c.a	ENSGT00390000010045
Boreoeutheria	ANCESTRAL SPECIES		ENSGT00950000182802.B.a.b	ENSGT00940000159314	ENSGT00940000155194	ENSGT00390000013174	ENSGT00940000156585	ENSGT01090000260040.b.b.b.a	ENSGT00950000183172.B	ENSGT00390000004191	ENSGT00390000015719.c	ENSGT00940000155361	ENSGT00390000016565	ENSGT00900000143263	ENSGT00390000017418	ENSGT00940000160747 #19	ENSGT00940000156338 #21	ENSGT00950000182900.B #22	ENSGT00390000007371 #23	ENSGT00940000160932 #24	ENSGT00940000159398 #25	ENSGT00940000163188	ENSGT00530000063929.a.b #26	ENSGT01060000248564.b.a.a.a #27	ENSGT00950000182962.b.a #28	ENSGT00390000018883 #29	ENSGT00940000157554 #30	ENSGT00940000163178	ENSGT00940000160073 #32	ENSGT01000000214440.A.a.b.a #33	ENSGT00940000156115 #34	ENSGT00530000063770.c.a	ENSGT00390000010045
Euarchontoglires	ANCESTRAL SPECIES		ENSGT00950000182802.B.a.a.a.a.i.b	ENSGT00940000159314	ENSGT00940000155194	ENSGT00390000013174	ENSGT00940000156585	ENSGT01090000260040.b.b.b.a	ENSGT00950000183172.B	ENSGT00390000004191	ENSGT00390000015719.c	ENSGT00940000155361	ENSGT00390000016565	ENSGT00900000143263	ENSGT00390000017418	ENSGT00940000160747 #19	ENSGT00940000156338 #21	ENSGT00950000182900.B #22	ENSGT00390000007371 #23	ENSGT00940000160932 #24	ENSGT00940000159398 #25	ENSGT00940000163188	ENSGT00530000063929.a.b #26	ENSGT01060000248564.b.a.a.a #27	ENSGT00950000182962.b.a #28	ENSGT00390000018883 #29	ENSGT00940000157554 #30	ENSGT00940000163178	ENSGT00940000160073 #32	ENSGT01000000214440.A.a.b.a #33	ENSGT00940000156115 #34	ENSGT00530000063770.c.a	ENSGT00390000010045
Euarchontoglires_A	ANCESTRAL SPECIES		ENSGT00950000182802.B.a.a.a.a.i.b	ENSGT00940000159314	ENSGT00940000155194	ENSGT00390000013174	ENSGT00940000156585	ENSGT01090000260040.b.b.b.a	ENSGT00950000183172.B	ENSGT00390000004191	ENSGT00390000015719.c	ENSGT00940000155361	ENSGT00390000016565	ENSGT00900000143263	ENSGT00390000017418	ENSGT00940000160747 #19	ENSGT00940000156338 #21	ENSGT00950000182900.B #22	ENSGT00390000007371 #23	ENSGT00940000160932 #24	ENSGT00940000159398 #25	ENSGT00940000163188	ENSGT00530000063929.a.b #26	ENSGT01060000248564.b.a.a.a #27	ENSGT00950000182962.b.a #28	ENSGT00390000018883 #29	ENSGT00940000157554 #30	ENSGT00940000160073 #32	ENSGT01000000214440.A.a.b.a #33	ENSGT00940000156115 #34	ENSGT00530000063770.c.a	ENSGT00390000010045	ENSGT00950000183182.a.a
Glires	ANCESTRAL SPECIES		ENSGT00950000182802.B.a.a.a.a.i.b	ENSGT00940000159314	ENSGT00940000155194	ENSGT00390000013174	ENSGT00940000156585	ENSGT01090000260040.b.b.b.a	ENSGT00950000183172.B	ENSGT00390000004191	ENSGT00390000015719.c	ENSGT00940000155361	ENSGT00390000016565	ENSGT00900000143263	ENSGT00390000017418	ENSGT00940000160747 #19	ENSGT00940000156338 #21	ENSGT00950000182900.B #22	ENSGT00390000007371 #23	ENSGT00940000160932 #24	ENSGT00940000159398 #25	ENSGT00940000163188	ENSGT00530000063929.a.b #26	ENSGT01060000248564.b.a.a.a #27	ENSGT00950000182962.b.a #28	ENSGT00390000018883 #29	ENSGT00940000157554 #30	ENSGT00940000160073 #32	ENSGT01000000214440.A.a.b.a #33	ENSGT00940000156115 #34	ENSGT00530000063770.c.a	ENSGT00390000010045	ENSGT00950000183182.a.a
Rodentia	ANCESTRAL SPECIES		ENSGT00950000182802.B.a.a.a.a.i.b	ENSGT00940000159314	ENSGT00940000155194	ENSGT00390000013174	ENSGT00940000156585	ENSGT01090000260040.b.b.b.a	ENSGT00950000183172.B	ENSGT00390000004191	ENSGT00390000015719.c	ENSGT00940000155361	ENSGT00390000016565	ENSGT00900000143263	ENSGT00390000017418	ENSGT00940000160747 #19	ENSGT00940000156338 #21	ENSGT00950000182900.B #22	ENSGT00390000007371 #23	ENSGT00940000160932 #24	ENSGT00940000159398 #25	ENSGT00940000163188	ENSGT00530000063929.a.b #26	ENSGT01060000248564.b.a.a.a #27	ENSGT00950000182962.b.a #28	ENSGT00390000018883 #29	ENSGT00940000157554 #30	ENSGT00940000160073 #32	ENSGT01000000214440.A.a.b.a #33	ENSGT00940000156115 #34	ENSGT00530000063770.c.a	ENSGT00390000010045	ENSGT00950000183182.a.a
Rodentia_B	ANCESTRAL SPECIES		ENSGT00950000182802.B.a.a.a.a.i.b	ENSGT00940000159314	ENSGT00940000155194	ENSGT00390000013174	ENSGT00940000156585	ENSGT01090000260040.b.b.b.a	ENSGT00950000183172.B	ENSGT00390000004191	ENSGT00390000015719.c	ENSGT00940000155361	ENSGT00390000016565	ENSGT00900000143263	ENSGT00390000017418	ENSGT00940000160747 #19	ENSGT00940000156338 #21	ENSGT00950000182900.B #22	ENSGT00390000007371 #23	ENSGT00940000160932 #24	ENSGT00940000159398 #25	ENSGT00940000163188	ENSGT00530000063929.a.b #26	ENSGT01060000248564.b.a.a.a #27	ENSGT00950000182962.b.a #28	ENSGT00390000018883 #29	ENSGT00940000157554 #30	ENSGT00940000160073 #32	ENSGT01000000214440.A.a.b.a #33	ENSGT00940000156115 #34	ENSGT00530000063770.c.a	ENSGT00390000010045	ENSGT00950000183182.a.a
Myomorpha	ANCESTRAL SPECIES	3	ENSGT00950000182802.B.a.a.a.a.i.b	ENSGT00940000159314	ENSGT00940000155194	ENSGT00390000013174	ENSGT00940000156585	ENSGT01090000260040.b.b.b.a	ENSGT00950000183172.B	ENSGT00390000004191	ENSGT00390000015719.c	ENSGT00940000155361	ENSGT00390000016565	ENSGT00900000143263	ENSGT00390000017418	ENSGT00940000160747 #19	ENSGT00940000156338 #21	ENSGT00950000182900.B #22	ENSGT00390000007371 #23	ENSGT00940000160932 #24	ENSGT00940000159398 #25	ENSGT00940000163188	ENSGT00530000063929.a.b #26	ENSGT01060000248564.b.a.a.a #27	ENSGT00950000182962.b.a #28	ENSGT00390000018883 #29	ENSGT00940000157554 #30	ENSGT00940000160073 #32	ENSGT01000000214440.A.a.b.a #33	ENSGT00940000156115 #34	ENSGT00530000063770.c.a	ENSGT00390000010045	ENSGT00950000183182.a.a
Muroidea	ANCESTRAL SPECIES	3	ENSGT00950000182802.B.a.a.a.a.i.b	ENSGT00940000159314	ENSGT00940000155194	ENSGT00390000013174	ENSGT00940000156585	ENSGT01090000260040.b.b.b.a	ENSGT00950000183172.B	ENSGT00390000004191	ENSGT00390000015719.c	ENSGT00940000155361	ENSGT00390000016565	ENSGT00900000143263	ENSGT00390000017418	ENSGT00940000160747 #19	ENSGT00940000156338 #21	ENSGT00950000182900.B #22	ENSGT00390000007371 #23	ENSGT00940000160932 #24	ENSGT00940000159398 #25	ENSGT00530000063929.a.b #26	ENSGT01060000248564.b.a.a.a #27	ENSGT00950000182962.b.a #28	ENSGT00390000018883 #29	ENSGT00940000157554 #30	ENSGT00940000160073 #32	ENSGT01000000214440.A.a.b.a #33	ENSGT00940000156115 #34	ENSGT00530000063770.c.a	ENSGT00390000010045	ENSGT00950000183182.a.a	ENSGT01090000260093.b
Upper Galilee mountains blind mole rat	MODERN SPECIES	967												ENSNGAG00000016538 #18	Tent5b (ENSNGAG00000010187) #19	ENSNGAG00000020552 #20	Slc9a1 (ENSNGAG00000016127) #21	Wdtc1 (ENSNGAG00000013121) #22	Tmem222 (ENSNGAG00000011488) #23	Sytl1 (ENSNGAG00000014815) #24	Map3k6 (ENSNGAG00000017010) #25	Cd164l2 (ENSNGAG00000019740) #26	Gpr3 (ENSNGAG00000017974) #27	Wasf2 (ENSNGAG00000017438) #28	Ahdc1 (ENSNGAG00000013639) #29	Fgr (ENSNGAG00000014779) #30	ENSNGAG00000012320 #31	Fam76a (ENSNGAG00000021702) #32	Stx12 (ENSNGAG00000022319) #33	Ppp1r8 (ENSNGAG00000001089) #34
Muroidea_A	ANCESTRAL SPECIES	3	ENSGT00950000182802.B.a.a.a.a.i.b	ENSGT00940000159314	ENSGT00940000155194	ENSGT00390000013174	ENSGT00940000156585	ENSGT01090000260040.b.b.b.a	ENSGT00950000183172.B	ENSGT00390000004191	ENSGT00390000015719.c	ENSGT00940000155361	ENSGT00390000016565	ENSGT00900000143263	ENSGT00390000017418	ENSGT00940000160747 #19	ENSGT00940000156338 #21	ENSGT00950000182900.B #22	ENSGT00390000007371 #23	ENSGT00940000160932 #24	ENSGT00940000159398 #25	ENSGT00530000063929.a.b #26	ENSGT01060000248564.b.a.a.a #27	ENSGT00950000182962.b.a #28	ENSGT00390000018883 #29	ENSGT00940000157554 #30	ENSGT00940000160073 #32	ENSGT01000000214440.A.a.b.a #33	ENSGT00940000156115 #34	ENSGT00530000063770.c.a	ENSGT00390000010045	ENSGT00950000183182.a.a	ENSGT01090000260093.b
Murinae	ANCESTRAL SPECIES	2	ENSGT00950000182802.B.a.a.a.a.i.b	ENSGT00940000159314	ENSGT00940000155194	ENSGT00390000013174	ENSGT00940000156585	ENSGT01090000260040.b.b.b.a	ENSGT00950000183172.B	ENSGT00390000004191	ENSGT00390000015719.c	ENSGT00940000155361	ENSGT00900000143263	ENSGT00390000016565	ENSGT00390000017418	ENSGT00940000160747 #19	ENSGT00940000156338 #21	ENSGT00950000182900.B #22	ENSGT00390000007371 #23	ENSGT00940000160932 #24	ENSGT00940000159398 #25	ENSGT00530000063929.a.b #26	ENSGT01060000248564.b.a.a.a #27	ENSGT00950000182962.b.a #28	ENSGT00390000018883 #29	ENSGT00940000157554 #30	ENSGT00940000160073 #32	ENSGT01000000214440.A.a.b.a #33	ENSGT00940000156115 #34	ENSGT00530000063770.c.a	ENSGT00390000010045	ENSGT00950000183182.a.a	ENSGT01090000260093.b
Mus	ANCESTRAL SPECIES	3	ENSGT00950000182802.B.a.a.a.a.i.b	ENSGT00940000159314	ENSGT00940000155194	ENSGT00390000013174	ENSGT00940000156585	ENSGT01090000260040.b.b.b.a	ENSGT00950000183172.B	ENSGT00390000004191	ENSGT00390000015719.c	ENSGT00940000155361	ENSGT00900000143263	ENSGT00390000016565	ENSGT00390000017418	ENSGT00940000160747 #19	ENSGT00940000156338 #21	ENSGT00950000182900.B #22	ENSGT00390000007371 #23	ENSGT00940000160932 #24	ENSGT00940000159398 #25	ENSGT00530000063929.a.b #26	ENSGT01060000248564.b.a.a.a #27	ENSGT00950000182962.b.a #28	ENSGT00390000018883 #29	ENSGT00940000157554 #30	ENSGT00940000160073 #32	ENSGT01000000214440.A.a.b.a #33	ENSGT00940000156115 #34	ENSGT00530000063770.c.a	ENSGT00390000010045	ENSGT00950000183182.a.a	ENSGT01090000260093.b
Mus_A	ANCESTRAL SPECIES	3	ENSGT00950000182802.B.a.a.a.a.i.b	ENSGT00940000159314	ENSGT00940000155194	ENSGT00390000013174	ENSGT00940000156585	ENSGT01090000260040.b.b.b.a	ENSGT00950000183172.B	ENSGT00390000004191	ENSGT00390000015719.c	ENSGT00940000155361	ENSGT00900000143263	ENSGT00390000016565	ENSGT00390000017418	ENSGT00940000160747 #19	ENSGT00940000156338 #21	ENSGT00950000182900.B #22	ENSGT00390000007371 #23	ENSGT00940000160932 #24	ENSGT00940000159398 #25	ENSGT00530000063929.a.b #26	ENSGT01060000248564.b.a.a.a #27	ENSGT00950000182962.b.a #28	ENSGT00390000018883 #29	ENSGT00940000157554 #30	ENSGT00940000160073 #32	ENSGT01000000214440.A.a.b.a #33	ENSGT00940000156115 #34	ENSGT00530000063770.c.a	ENSGT00390000010045	ENSGT00950000183182.a.a	ENSGT01090000260093.b
Mus_B	ANCESTRAL SPECIES	5	ENSGT00950000182802.B.a.a.a.a.i.b	ENSGT00940000159314	ENSGT00940000155194	ENSGT00390000013174	ENSGT00940000156585	ENSGT01090000260040.b.b.b.a	ENSGT00950000183172.B	ENSGT00390000004191	ENSGT00390000015719.c	ENSGT00940000155361	ENSGT00900000143263	ENSGT00390000016565	ENSGT00390000017418	ENSGT00940000160747 #19	ENSGT00940000156338 #21	ENSGT00950000182900.B #22	ENSGT00390000007371 #23	ENSGT00940000160932 #24	ENSGT00940000159398 #25	ENSGT00530000063929.a.b #26	ENSGT01060000248564.b.a.a.a #27	ENSGT00950000182962.b.a #28	ENSGT00390000018883 #29	ENSGT00940000157554 #30	ENSGT00940000160073 #32	ENSGT01000000214440.A.a.b.a #33	ENSGT00940000156115 #34	ENSGT00530000063770.c.a	ENSGT00390000010045	ENSGT00950000183182.a.a	ENSGT01090000260093.b
Mus_C	ANCESTRAL SPECIES	2	ENSGT00950000182802.B.a.a.a.a.i.b	ENSGT00940000159314	ENSGT00940000155194	ENSGT00390000013174	ENSGT00940000156585	ENSGT01090000260040.b.b.b.a	ENSGT00950000183172.B	ENSGT00390000004191	ENSGT00390000015719.c	ENSGT00940000155361	ENSGT00900000143263	ENSGT00390000016565	ENSGT00390000017418	ENSGT00940000160747 #19	ENSGT00940000156338 #21	ENSGT00950000182900.B #22	ENSGT00390000007371 #23	ENSGT00940000160932 #24	ENSGT00940000159398 #25	ENSGT00530000063929.a.b #26	ENSGT01060000248564.b.a.a.a #27	ENSGT00950000182962.b.a #28	ENSGT00390000018883 #29	ENSGT00940000157554 #30	ENSGT00940000160073.g #32	ENSGT01000000214440.A.a.b.a #33	ENSGT00940000156115 #34	ENSGT00530000063770.c.a	ENSGT00390000010045	ENSGT00950000183182.a.a	ENSGT01090000260093.b
spretus	MODERN SPECIES	13	Lin28a (MGP_SPRETEiJ_G0027583)	Dhdds (MGP_SPRETEiJ_G0027582)	Hmgn2 (MGP_SPRETEiJ_G0027581)	Rps6ka1 (MGP_SPRETEiJ_G0027580)	Arid1a (MGP_SPRETEiJ_G0027579)	Pigv (MGP_SPRETEiJ_G0027578)	Zdhhc18 (MGP_SPRETEiJ_G0027577)	Gpn2 (MGP_SPRETEiJ_G0027576)	Gpatch3 (MGP_SPRETEiJ_G0027575)	Nr0b2 (MGP_SPRETEiJ_G0027574)	Nudc (MGP_SPRETEiJ_G0027573)	Kdf1 (MGP_SPRETEiJ_G0027572)	Trnp1 (MGP_SPRETEiJ_G0027571)	Tent5b (MGP_SPRETEiJ_G0027570) #19	Slc9a1 (MGP_SPRETEiJ_G0027569) #21	Wdtc1 (MGP_SPRETEiJ_G0027568) #22	Tmem222 (MGP_SPRETEiJ_G0027567) #23	Sytl1 (MGP_SPRETEiJ_G0027566) #24	Map3k6 (MGP_SPRETEiJ_G0027565) #25	Cd164l2 (MGP_SPRETEiJ_G0027564) #26	Gpr3 (MGP_SPRETEiJ_G0027563) #27	Wasf2 (MGP_SPRETEiJ_G0027562) #28	Ahdc1 (MGP_SPRETEiJ_G0027561) #29	Fgr (MGP_SPRETEiJ_G0027560) #30	Fam76a (MGP_SPRETEiJ_G0027559) #32	Stx12 (MGP_SPRETEiJ_G0027558) #33	Ppp1r8 (MGP_SPRETEiJ_G0027557) #34	Themis2 (MGP_SPRETEiJ_G0027556)	Rpa2 (MGP_SPRETEiJ_G0027555)	Smpdl3b (MGP_SPRETEiJ_G0027554)	Xkr8 (MGP_SPRETEiJ_G0027553)
Steppe mouse	MODERN SPECIES	3343	Arid1a (ENSMSIG00000000334)	Pigv (ENSMSIG00000000284)	ENSMSIG00000000251	Zdhhc18 (ENSMSIG00000000232)	Sfn (ENSMSIG00000000216)	Gpn2 (ENSMSIG00000000141)	Gpatch3 (ENSMSIG00000026503)	Nr0b2 (ENSMSIG00000026492)	Nudc (ENSMSIG00000026485)	ENSMSIG00000026482	Kdf1 (ENSMSIG00000026473)	Trnp1 (ENSMSIG00000026468)	ENSMSIG00000026463	Tent5b (ENSMSIG00000026455) #19	Slc9a1 (ENSMSIG00000026439) #21	Wdtc1 (ENSMSIG00000026410) #22	Tmem222 (ENSMSIG00000026400) #23	ENSMSIG00000026328 #24	Map3k6 (ENSMSIG00000026242) #25	Cd164l2 (ENSMSIG00000026225) #26	Gpr3 (ENSMSIG00000026220) #27	Wasf2 (ENSMSIG00000026175) #28	Ahdc1 (ENSMSIG00000026167) #29
Mouse	MODERN SPECIES	13	Dhdds (ENSMUSG00000012117)	Hmgn2 (ENSMUSG00000003038)	Rps6ka1 (ENSMUSG00000003644)	Arid1a (ENSMUSG00000007880)	Pigv (ENSMUSG00000043257)	Zdhhc18 (ENSMUSG00000037553)	Sfn (ENSMUSG00000047281)	Gpn2 (ENSMUSG00000028848)	Gpatch3 (ENSMUSG00000028850)	Nr0b2 (ENSMUSG00000037583)	Nudc (ENSMUSG00000028851)	Kdf1 (ENSMUSG00000037600)	Trnp1 (ENSMUSG00000056596)	Tent5b (ENSMUSG00000046694) #19	Slc9a1 (ENSMUSG00000028854) #21	Wdtc1 (ENSMUSG00000037622) #22	Tmem222 (ENSMUSG00000028857) #23	Sytl1 (ENSMUSG00000028860) #24	Map3k6 (ENSMUSG00000028862) #25	Cd164l2 (ENSMUSG00000028865) #26	Gpr3 (ENSMUSG00000049649) #27	Wasf2 (ENSMUSG00000028868) #28	Ahdc1 (ENSMUSG00000037692) #29	Fgr (ENSMUSG00000028874) #30	Fam76a (ENSMUSG00000028878) #32	Stx12 (ENSMUSG00000028879) #33	Ppp1r8 (ENSMUSG00000028882) #34	Themis2 (ENSMUSG00000037731)	Rpa2 (ENSMUSG00000028884)	Smpdl3b (ENSMUSG00000028885)	Xkr8 (ENSMUSG00000037752)
Ryukyu mouse	MODERN SPECIES	13	Dhdds (MGP_CAROLIEiJ_G0026602)	MGP_CAROLIEiJ_G0026601	Rps6ka1 (MGP_CAROLIEiJ_G0026600)	Arid1a (MGP_CAROLIEiJ_G0026599)	Pigv (MGP_CAROLIEiJ_G0026598)	Zdhhc18 (MGP_CAROLIEiJ_G0026597)	Sfn (MGP_CAROLIEiJ_G0026596)	Gpn2 (MGP_CAROLIEiJ_G0026595)	Gpatch3 (MGP_CAROLIEiJ_G0026594)	Nr0b2 (MGP_CAROLIEiJ_G0026593)	Nudc (MGP_CAROLIEiJ_G0026592)	Kdf1 (MGP_CAROLIEiJ_G0026591)	Trnp1 (MGP_CAROLIEiJ_G0026590)	Tent5b (MGP_CAROLIEiJ_G0026589) #19	Slc9a1 (MGP_CAROLIEiJ_G0026588) #21	Wdtc1 (MGP_CAROLIEiJ_G0026587) #22	Tmem222 (MGP_CAROLIEiJ_G0026586) #23	Sytl1 (MGP_CAROLIEiJ_G0026585) #24	Map3k6 (MGP_CAROLIEiJ_G0026584) #25	Cd164l2 (MGP_CAROLIEiJ_G0026583) #26	Gpr3 (MGP_CAROLIEiJ_G0026582) #27	Wasf2 (MGP_CAROLIEiJ_G0026581) #28	Ahdc1 (MGP_CAROLIEiJ_G0026580) #29	Fgr (MGP_CAROLIEiJ_G0026579) #30	Fam76a (MGP_CAROLIEiJ_G0026578) #32	Stx12 (MGP_CAROLIEiJ_G0026577) #33	Ppp1r8 (MGP_CAROLIEiJ_G0026576) #34	Themis2 (MGP_CAROLIEiJ_G0026575)	Rpa2 (MGP_CAROLIEiJ_G0026574)	Smpdl3b (MGP_CAROLIEiJ_G0026573)	Xkr8 (MGP_CAROLIEiJ_G0026572)
Shrew mouse	MODERN SPECIES	19	Dhdds (MGP_PahariEiJ_G0028935)	MGP_PahariEiJ_G0028934	Rps6ka1 (MGP_PahariEiJ_G0028933)	Arid1a (MGP_PahariEiJ_G0028932)	Pigv (MGP_PahariEiJ_G0028931)	MGP_PahariEiJ_G0028930	Sfn (MGP_PahariEiJ_G0028929)	Gpn2 (MGP_PahariEiJ_G0028928)	Gpatch3 (MGP_PahariEiJ_G0028927)	Nr0b2 (MGP_PahariEiJ_G0028926)	Nudc (MGP_PahariEiJ_G0028925)	Kdf1 (MGP_PahariEiJ_G0028924)	Trnp1 (MGP_PahariEiJ_G0028923)	Tent5b (MGP_PahariEiJ_G0028922) #19	Slc9a1 (MGP_PahariEiJ_G0028921) #21	Wdtc1 (MGP_PahariEiJ_G0028920) #22	Tmem222 (MGP_PahariEiJ_G0028919) #23	Sytl1 (MGP_PahariEiJ_G0028918) #24	Map3k6 (MGP_PahariEiJ_G0028917) #25	Cd164l2 (MGP_PahariEiJ_G0028916) #26	Gpr3 (MGP_PahariEiJ_G0028915) #27	Wasf2 (MGP_PahariEiJ_G0028914) #28	Ahdc1 (MGP_PahariEiJ_G0028913) #29	Fgr (MGP_PahariEiJ_G0028912) #30	Fam76a (MGP_PahariEiJ_G0028911) #32	MGP_PahariEiJ_G0028910 #33	Ppp1r8 (MGP_PahariEiJ_G0028909) #34	Themis2 (MGP_PahariEiJ_G0028908)	Rpa2 (MGP_PahariEiJ_G0028907)	Smpdl3b (MGP_PahariEiJ_G0028906)	Xkr8 (MGP_PahariEiJ_G0028905)
Rat	MODERN SPECIES	15	Arid1a (ENSRNOG00000006137)	Pigv (ENSRNOG00000000121)	Zdhhc18 (ENSRNOG00000058156)	Sfn (ENSRNOG00000033153)	Gpn2 (ENSRNOG00000007083)	Gpatch3 (ENSRNOG00000007097)	ENSRNOG00000066253	Nr0b2 (ENSRNOG00000007229)	Nudc (ENSRNOG00000051720)	AC118963.1 (ENSRNOG00000049922)	Kdf1 (ENSRNOG00000055933)	ENSRNOG00000068236	Trnp1 (ENSRNOG00000055936)	Tent5b (ENSRNOG00000056153) #19	Slc9a1 (ENSRNOG00000007982) #21	Wdtc1 (ENSRNOG00000008377) #22	Tmem222 (ENSRNOG00000008564) #23	Map3k6 (ENSRNOG00000008936) #25	Cd164l2 (ENSRNOG00000009505) #26	Sytl1 (ENSRNOG00000008600) #24	Gpr3 (ENSRNOG00000009540) #27	Wasf2 (ENSRNOG00000009805) #28	Ahdc1 (ENSRNOG00000042855) #29	Fgr (ENSRNOG00000009912) #30	Fam76a (ENSRNOG00000011254) #32	Stx12 (ENSRNOG00000011804) #33	Ppp1r8 (ENSRNOG00000059550) #34	Themis2 (ENSRNOG00000012965)	Rpa2 (ENSRNOG00000013005)	Smpdl3b (ENSRNOG00000042326)	Xkr8 (ENSRNOG00000024312)
Cricetidae	ANCESTRAL SPECIES	2	ENSGT00950000182802.B.a.a.a.a.i.b	ENSGT00940000159314	ENSGT00940000155194	ENSGT00390000013174	ENSGT00940000156585	ENSGT01090000260040.b.b.b.a	ENSGT00950000183172.B	ENSGT00390000004191	ENSGT00390000015719.c	ENSGT00940000155361	ENSGT00390000016565	ENSGT00900000143263	ENSGT00390000017418	ENSGT00940000160747 #19	ENSGT00940000156338 #21	ENSGT00950000182900.B #22	ENSGT00390000007371 #23	ENSGT00940000160932 #24	ENSGT00940000159398 #25	ENSGT00530000063929.a.b #26	ENSGT01060000248564.b.a.a.a #27	ENSGT00950000182962.b.a #28	ENSGT00390000018883 #29	ENSGT00940000157554 #30	ENSGT00940000160073 #32	ENSGT01000000214440.A.a.b.a #33	ENSGT00940000156115 #34	ENSGT00530000063770.c.a	ENSGT00390000010045	ENSGT00950000183182.a.a	ENSGT01090000260093.b
Cricetidae_B	ANCESTRAL SPECIES	2	ENSGT00390000007879	ENSGT00950000182802.B.a.a.a.a.i.b	ENSGT00940000159314	ENSGT00940000155194	ENSGT00390000013174	ENSGT00940000156585	ENSGT01090000260040.b.b.b.a	ENSGT00950000183172.B	ENSGT00390000004191	ENSGT00390000015719.c	ENSGT00940000155361	ENSGT00390000016565	ENSGT00390000017418	ENSGT00940000160747 #19	ENSGT00940000156338 #21	ENSGT00950000182900.B #22	ENSGT00390000007371 #23	ENSGT00940000160932 #24	ENSGT00940000159398 #25	ENSGT00530000063929.a.b #26	ENSGT01060000248564.b.a.a.a #27	ENSGT00950000182962.b.a #28	ENSGT00390000018883 #29	ENSGT00940000157554 #30	ENSGT00940000160073 #32	ENSGT01000000214440.A.a.b.a #33	ENSGT00940000156115 #34	ENSGT00530000063770.c.a	ENSGT00390000010045	ENSGT00950000183182.a.a	ENSGT01090000260093.b
Prairie vole	MODERN SPECIES	1	Dhdds (ENSMOCG00000018150)	ENSMOCG00000009477	Rps6ka1 (ENSMOCG00000005121)	Arid1a (ENSMOCG00000015143)	Zdhhc18 (ENSMOCG00000014386)	Pigv (ENSMOCG00000021093)	Sfn (ENSMOCG00000007160)	Gpn2 (ENSMOCG00000016502)	Gpatch3 (ENSMOCG00000022375)	Nr0b2 (ENSMOCG00000022706)	ENSMOCG00000009769	Kdf1 (ENSMOCG00000008803)	Trnp1 (ENSMOCG00000004450)	Tent5b (ENSMOCG00000006029) #19	Slc9a1 (ENSMOCG00000001951) #21	Wdtc1 (ENSMOCG00000021708) #22	Tmem222 (ENSMOCG00000001826) #23	Sytl1 (ENSMOCG00000006535) #24	Map3k6 (ENSMOCG00000022830) #25	Cd164l2 (ENSMOCG00000012161) #26	Gpr3 (ENSMOCG00000014276) #27	Wasf2 (ENSMOCG00000015492) #28	Ahdc1 (ENSMOCG00000016500) #29	Fgr (ENSMOCG00000019562) #30	Fam76a (ENSMOCG00000021395) #32	Stx12 (ENSMOCG00000014196) #33	ENSMOCG00000022691 #34	Themis2 (ENSMOCG00000003168)	Rpa2 (ENSMOCG00000007092)	Smpdl3b (ENSMOCG00000016324)	Xkr8 (ENSMOCG00000002218)
Northern American deer mouse	MODERN SPECIES	11	Hmgn2 (ENSPEMG00000006552)	Rps6ka1 (ENSPEMG00000001640)	Arid1a (ENSPEMG00000009102)	Pigv (ENSPEMG00000000163)	Zdhhc18 (ENSPEMG00000022857)	Sfn (ENSPEMG00000004203)	Gpn2 (ENSPEMG00000020796)	Gpatch3 (ENSPEMG00000020632)	Nr0b2 (ENSPEMG00000020621)	Nudc (ENSPEMG00000020579)	Kdf1 (ENSPEMG00000010418)	ENSPEMG00000020456	ENSPEMG00000024927	Tent5b (ENSPEMG00000026289) #19	Slc9a1 (ENSPEMG00000008998) #21	Wdtc1 (ENSPEMG00000011264) #22	Tmem222 (ENSPEMG00000017489) #23	Sytl1 (ENSPEMG00000011614) #24	Map3k6 (ENSPEMG00000015180) #25	Cd164l2 (ENSPEMG00000013041) #26	Gpr3 (ENSPEMG00000005212) #27	Wasf2 (ENSPEMG00000011815) #28	ENSPEMG00000013859	Ahdc1 (ENSPEMG00000014274) #29	Fgr (ENSPEMG00000000914) #30	ENSPEMG00000014678 #32	Stx12 (ENSPEMG00000025346) #33	Ppp1r8 (ENSPEMG00000003512) #34	Themis2 (ENSPEMG00000008336)	Rpa2 (ENSPEMG00000006270)	Smpdl3b (ENSPEMG00000003316)
Cricetinae	ANCESTRAL SPECIES	5	ENSGT00950000182802.B.a.a.a.a.i.b	ENSGT00940000159314	ENSGT00940000155194	ENSGT00390000013174	ENSGT00940000156585	ENSGT01090000260040.b.b.b.a	ENSGT00950000183172.B	ENSGT00390000004191	ENSGT00390000015719.c	ENSGT00940000155361	ENSGT00390000016565	ENSGT00900000143263	ENSGT00390000017418	ENSGT00940000160747 #19	ENSGT00940000156338 #21	ENSGT00950000182900.B #22	ENSGT00390000007371 #23	ENSGT00940000160932 #24	ENSGT00940000159398 #25	ENSGT00530000063929.a.b #26	ENSGT01060000248564.b.a.a.a #27	ENSGT00950000182962.b.a #28	ENSGT00390000018883 #29	ENSGT00940000157554 #30	ENSGT00940000160073 #32	ENSGT01000000214440.A.a.b.a #33	ENSGT00940000156115 #34	ENSGT00530000063770.c.a	ENSGT00390000010045	ENSGT00950000183182.a.a	ENSGT01090000260093.b
Chinese hamster chok1gshd	MODERN SPECIES	111	Hmgn2 (ENSCGRG00001020969)	Rps6ka1 (ENSCGRG00001024951)	Arid1a (ENSCGRG00001022343)	Pigv (ENSCGRG00001013693)	Zdhhc18 (ENSCGRG00001024788)	Sfn (ENSCGRG00001008371)	Gpn2 (ENSCGRG00001023875)	Gpatch3 (ENSCGRG00001002930)	Nr0b2 (ENSCGRG00001020066)	ENSCGRG00001022208	Kdf1 (ENSCGRG00001003180)	ENSCGRG00001022474	Trnp1 (ENSCGRG00001024587)	Tent5b (ENSCGRG00001024770) #19	Slc9a1 (ENSCGRG00001002747) #21	Wdtc1 (ENSCGRG00001015126) #22	Tmem222 (ENSCGRG00001020116) #23	Sytl1 (ENSCGRG00001013995) #24	Map3k6 (ENSCGRG00001019547) #25	Cd164l2 (ENSCGRG00001024895) #26	Gpr3 (ENSCGRG00001001244) #27	Wasf2 (ENSCGRG00001020852) #28	Ahdc1 (ENSCGRG00001012820) #29	Fgr (ENSCGRG00001024485) #30	ENSCGRG00001007863 #32	Stx12 (ENSCGRG00001016934) #33	Ppp1r8 (ENSCGRG00001019839) #34	Themis2 (ENSCGRG00001024729)	Rpa2 (ENSCGRG00001007332)	Smpdl3b (ENSCGRG00001016883)	Xkr8 (ENSCGRG00001017118)
Golden Hamster	MODERN SPECIES	709	Hmgn2-ps (ENSMAUG00000017301)	Rps6ka1 (ENSMAUG00000017784)	ENSMAUG00000004576	ENSMAUG00000020343	Pigv (ENSMAUG00000020277)	Zdhhc18 (ENSMAUG00000011253)	Sfn (ENSMAUG00000008489)	Gpn2 (ENSMAUG00000013057)	Gpatch3 (ENSMAUG00000002005)	Nr0b2 (ENSMAUG00000020860)	Nudc (ENSMAUG00000008166)	Kdf1 (ENSMAUG00000021929)	Trnp1 (ENSMAUG00000019939)	Tent5b (ENSMAUG00000014675) #19	ENSMAUG00000001078 #21	Wdtc1 (ENSMAUG00000004693) #22	Tmem222 (ENSMAUG00000007829) #23	Sytl1 (ENSMAUG00000018014) #24	Map3k6 (ENSMAUG00000017302) #25	ENSMAUG00000011191	Gpr3 (ENSMAUG00000014246) #27	Wasf2 (ENSMAUG00000012124) #28	Ahdc1 (ENSMAUG00000013108) #29	Fgr (ENSMAUG00000006765) #30	Fam76a (ENSMAUG00000016561) #32	Stx12 (ENSMAUG00000016314) #33	Ppp1r8 (ENSMAUG00000009797) #34	Themis2 (ENSMAUG00000000821)	Rpa2 (ENSMAUG00000002825)	Smpdl3b (ENSMAUG00000014184)	Xkr8 (ENSMAUG00000009395)
Lesser Egyptian jerboa	MODERN SPECIES	201	Lin28a (ENSJJAG00000018806)	Dhdds (ENSJJAG00000020279)	ENSJJAG00000020754	Rps6ka1 (ENSJJAG00000000276)	Arid1a (ENSJJAG00000018018)	Pigv (ENSJJAG00000019530)	Zdhhc18 (ENSJJAG00000021450)	Sfn (ENSJJAG00000012903)	Gpn2 (ENSJJAG00000022134)	Gpatch3 (ENSJJAG00000003292)	Nr0b2 (ENSJJAG00000012389)	Nudc (ENSJJAG00000017209)	Kdf1 (ENSJJAG00000017615)	ENSJJAG00000017789 #19	Slc9a1 (ENSJJAG00000019281) #21	Wdtc1 (ENSJJAG00000021957) #22	Tmem222 (ENSJJAG00000002275) #23	Sytl1 (ENSJJAG00000011352) #24	Map3k6 (ENSJJAG00000020163) #25	ENSJJAG00000014104	Cd164l2 (ENSJJAG00000014470) #26	Gpr3 (ENSJJAG00000018961) #27	Wasf2 (ENSJJAG00000019149) #28	Ahdc1 (ENSJJAG00000019425) #29	Fgr (ENSJJAG00000019812) #30	ENSJJAG00000002452 #32	Stx12 (ENSJJAG00000004079) #33	ENSJJAG00000010784 #34	Themis2 (ENSJJAG00000012926)	ENSJJAG00000014579	Smpdl3b (ENSJJAG00000015036)
Kangaroo rat	MODERN SPECIES	325	Dhdds (ENSDORG00000001776)	Hmgn2 (ENSDORG00000001787)	Rps6ka1 (ENSDORG00000007099)	Arid1a (ENSDORG00000002442)	Pigv (ENSDORG00000008243)	Zdhhc18 (ENSDORG00000012486)	Sfn (ENSDORG00000012487)	Gpn2 (ENSDORG00000005203)	ENSDORG00000005205	Nr0b2 (ENSDORG00000023804)	Nudc (ENSDORG00000026035)	Kdf1 (ENSDORG00000023459)	ENSDORG00000030030	Tent5b (ENSDORG00000015648) #19	Slc9a1 (ENSDORG00000012211) #21	Wdtc1 (ENSDORG00000012982) #22	Tmem222 (ENSDORG00000009464) #23	Sytl1 (ENSDORG00000009466) #24	Map3k6 (ENSDORG00000009469) #25	ENSDORG00000009474	Cd164l2 (ENSDORG00000009477) #26	Gpr3 (ENSDORG00000007347) #27	Wasf2 (ENSDORG00000007346) #28	Ahdc1 (ENSDORG00000010729) #29	Fgr (ENSDORG00000015238) #30	Fam76a (ENSDORG00000000575) #32	Stx12 (ENSDORG00000001059) #33	ENSDORG00000025172 #34	Themis2 (ENSDORG00000003740)	Rpa2 (ENSDORG00000003741)	Smpdl3b (ENSDORG00000015612)
Rodentia_A	ANCESTRAL SPECIES		ENSGT00950000182802.B.a.a.a.a.i.b	ENSGT00940000159314	ENSGT00940000155194	ENSGT00390000013174	ENSGT00940000156585	ENSGT01090000260040.b.b.b.a	ENSGT00950000183172.B	ENSGT00390000004191	ENSGT00390000015719.c	ENSGT00940000155361	ENSGT00390000016565	ENSGT00900000143263	ENSGT00390000017418	ENSGT00940000160747 #19	ENSGT00940000156338 #21	ENSGT00950000182900.B #22	ENSGT00390000007371 #23	ENSGT00940000160932 #24	ENSGT00940000159398 #25	ENSGT00940000163188	ENSGT00530000063929.a.b #26	ENSGT01060000248564.b.a.a.a #27	ENSGT00950000182962.b.a #28	ENSGT00390000018883 #29	ENSGT00940000157554 #30	ENSGT00940000160073 #32	ENSGT01000000214440.A.a.b.a #33	ENSGT00940000156115 #34	ENSGT00530000063770.c.a	ENSGT00390000010045	ENSGT00950000183182.a.a
Hystricomorpha	ANCESTRAL SPECIES	4	ENSGT00390000007879	ENSGT00950000182802.B.a.a.a.a.i.b	ENSGT00940000159314	ENSGT00940000155194	ENSGT00390000013174	ENSGT00940000156585	ENSGT01090000260040.b.b.b.a	ENSGT00950000183172.B	ENSGT00390000004191	ENSGT00390000015719.c	ENSGT00940000155361	ENSGT00390000016565	ENSGT00390000017418	ENSGT00940000160747 #19	ENSGT00940000156338 #21	ENSGT00950000182900.B #22	ENSGT00390000007371 #23	ENSGT00940000160932 #24	ENSGT00940000159398 #25	ENSGT00940000163188	ENSGT00530000063929.a.b #26	ENSGT01060000248564.b.a.a.a #27	ENSGT00950000182962.b.a #28	ENSGT00390000018883 #29	ENSGT00940000157554 #30	ENSGT00940000160073 #32	ENSGT01000000214440.A.a.b.a #33	ENSGT00940000156115 #34	ENSGT00530000063770.c.a	ENSGT00390000010045	ENSGT00950000183182.a.a
Hystricomorpha_a	ANCESTRAL SPECIES	1	ENSGT00390000007879	ENSGT00950000182802.B.a.a.a.a.i.b	ENSGT00940000159314	ENSGT00940000155194	ENSGT00390000013174	ENSGT00940000156585	ENSGT01090000260040.b.b.b.a	ENSGT00950000183172.B	ENSGT00390000004191	ENSGT00390000015719.c	ENSGT00940000155361	ENSGT00390000016565	ENSGT00390000017418	ENSGT00940000160747 #19	ENSGT00940000156338 #21	ENSGT00950000182900.B #22	ENSGT00390000007371 #23	ENSGT00940000160932 #24	ENSGT00940000159398 #25	ENSGT00530000063929.a.b #26	ENSGT01060000248564.b.a.a.a #27	ENSGT00950000182962.b.a #28	ENSGT00390000018883 #29	ENSGT00940000157554 #30	ENSGT00940000160073 #32	ENSGT01000000214440.A.a.b.a #33	ENSGT00940000156115 #34	ENSGT00530000063770.c.a	ENSGT00390000010045	ENSGT00950000183182.a.a	ENSGT01090000260093.b
Hystricomorpha_b	ANCESTRAL SPECIES	7	ENSGT00390000007879	ENSGT00950000182802.B.a.a.a.a.i.b	ENSGT00940000159314	ENSGT00940000155194	ENSGT00390000013174	ENSGT00940000156585	ENSGT01090000260040.b.b.b.a	ENSGT00950000183172.B	ENSGT00390000004191	ENSGT00390000015719.c	ENSGT00940000155361	ENSGT00390000016565	ENSGT00390000017418	ENSGT00940000160747 #19	ENSGT00940000156338 #21	ENSGT00950000182900.B #22	ENSGT00390000007371 #23	ENSGT00940000160932 #24	ENSGT00940000159398 #25	ENSGT00940000163188	ENSGT00530000063929.a.b #26	ENSGT01060000248564.b.a.a.a #27	ENSGT00950000182962.b.a #28	ENSGT00390000018883 #29	ENSGT00940000157554 #30	ENSGT00940000160073 #32	ENSGT01000000214440.A.a.b.a #33	ENSGT00940000156115 #34	ENSGT00530000063770.c.a	ENSGT00390000010045	ENSGT00950000183182.a.a
Degu	MODERN SPECIES	204	RPS6KA1 (ENSODEG00000005545)	ENSODEG00000005573	ARID1A (ENSODEG00000005639)	PIGV (ENSODEG00000005864)	ZDHHC18 (ENSODEG00000003193)	ENSODEG00000018988	GPN2 (ENSODEG00000003267)	GPATCH3 (ENSODEG00000003292)	NR0B2 (ENSODEG00000003311)	ENSODEG00000003339	ENSODEG00000003581	TRNP1 (ENSODEG00000003604)	TENT5B (ENSODEG00000003616) #19	SLC9A1 (ENSODEG00000003659) #21	ENSODEG00000003743	WDTC1 (ENSODEG00000003804) #22	TMEM222 (ENSODEG00000003675) #23	SYTL1 (ENSODEG00000003707) #24	MAP3K6 (ENSODEG00000004172) #25	CD164L2 (ENSODEG00000004416) #26	GPR3 (ENSODEG00000004543) #27	WASF2 (ENSODEG00000003793) #28	AHDC1 (ENSODEG00000019150) #29	FGR (ENSODEG00000004016) #30	ENSODEG00000019010	FAM76A (ENSODEG00000004142) #32	ENSODEG00000019037	STX12 (ENSODEG00000004182) #33	PPP1R8 (ENSODEG00000004352) #34	ENSODEG00000004373	THEMIS2 (ENSODEG00000004403)
Long-tailed chinchilla	MODERN SPECIES	159	LIN28A (ENSCLAG00000013508)	DHDDS (ENSCLAG00000009304)	HMGN2 (ENSCLAG00000008674)	RPS6KA1 (ENSCLAG00000012043)	ARID1A (ENSCLAG00000008499)	PIGV (ENSCLAG00000011353)	ZDHHC18 (ENSCLAG00000015099)	SFN (ENSCLAG00000018088)	GPN2 (ENSCLAG00000015368)	GPATCH3 (ENSCLAG00000012064)	NR0B2 (ENSCLAG00000012438)	NUDC (ENSCLAG00000008191)	KDF1 (ENSCLAG00000009636)	TENT5B (ENSCLAG00000010180) #19	SLC9A1 (ENSCLAG00000011250) #21	WDTC1 (ENSCLAG00000012710) #22	TMEM222 (ENSCLAG00000014379) #23	SYTL1 (ENSCLAG00000011750) #24	MAP3K6 (ENSCLAG00000015178) #25	FCN3 (ENSCLAG00000010084)	GPR3 (ENSCLAG00000012893) #27	WASF2 (ENSCLAG00000013958) #28	AHDC1 (ENSCLAG00000013754) #29	FGR (ENSCLAG00000014147) #30	FAM76A (ENSCLAG00000008844) #32	STX12 (ENSCLAG00000013795) #33	PPP1R8 (ENSCLAG00000011211) #34	THEMIS2 (ENSCLAG00000012140)	RPA2 (ENSCLAG00000010772)	SMPDL3B (ENSCLAG00000011768)	XKR8 (ENSCLAG00000011287)
Guinea pig	MODERN SPECIES	25	DHDDS (ENSCPOG00000008087)	HMGN2 (ENSCPOG00000039945)	RPS6KA1 (ENSCPOG00000003945)	ENSCPOG00000021806	ARID1A (ENSCPOG00000010387)	ENSCPOG00000033509	ZDHHC18 (ENSCPOG00000010395)	SFN (ENSCPOG00000035257)	GPN2 (ENSCPOG00000002848)	GPATCH3 (ENSCPOG00000010404)	NR0B2 (ENSCPOG00000010409)	NUDC (ENSCPOG00000010413)	KDF1 (ENSCPOG00000022999)	TENT5B (ENSCPOG00000032542) #19	SLC9A1 (ENSCPOG00000035897) #21	WDTC1 (ENSCPOG00000012347) #22	TMEM222 (ENSCPOG00000020198) #23	SYTL1 (ENSCPOG00000012354) #24	MAP3K6 (ENSCPOG00000012359) #25	CD164L2 (ENSCPOG00000022092) #26	GPR3 (ENSCPOG00000027123) #27	WASF2 (ENSCPOG00000012376) #28	AHDC1 (ENSCPOG00000022607) #29	FGR (ENSCPOG00000015092) #30	ENSCPOG00000031828	FAM76A (ENSCPOG00000006186) #32	STX12 (ENSCPOG00000013160) #33	PPP1R8 (ENSCPOG00000036078) #34	THEMIS2 (ENSCPOG00000033796)	RPA2 (ENSCPOG00000008766)	SMPDL3B (ENSCPOG00000008773)
Naked mole-rat female	MODERN SPECIES	26	ENSHGLG00000033713	ARID1A (ENSHGLG00000010530)	PIGV (ENSHGLG00000019195)	ZDHHC18 (ENSHGLG00000018702)	SFN (ENSHGLG00000033145)	GPN2 (ENSHGLG00000012257)	GPATCH3 (ENSHGLG00000012492)	NR0B2 (ENSHGLG00000032117)	NUDC (ENSHGLG00000011404)	KDF1 (ENSHGLG00000012217)	TRNP1 (ENSHGLG00000041801)	TENT5B (ENSHGLG00000034048) #19	ENSHGLG00000047714	SLC9A1 (ENSHGLG00000036829) #21	ENSHGLG00000044722	WDTC1 (ENSHGLG00000013846) #22	ENSHGLG00000007610	TMEM222 (ENSHGLG00000011121) #23	SYTL1 (ENSHGLG00000011880) #24	MAP3K6 (ENSHGLG00000012888) #25	FCN3 (ENSHGLG00000012337)	ENSHGLG00000013863 #26	GPR3 (ENSHGLG00000046961) #27	WASF2 (ENSHGLG00000048286) #28	AHDC1 (ENSHGLG00000014470) #29	FGR (ENSHGLG00000018738) #30	FAM76A (ENSHGLG00000009747) #32	ENSHGLG00000014326 #34	THEMIS2 (ENSHGLG00000019146)	RPA2 (ENSHGLG00000018528)	SMPDL3B (ENSHGLG00000012112)
Sciuridae	ANCESTRAL SPECIES	3	ENSGT00950000182802.B.a.b.s	ENSGT00940000159314	ENSGT00940000155194	ENSGT00390000013174	ENSGT00940000156585	ENSGT01090000260040.b.b.b.a	ENSGT00950000183172.B	ENSGT00390000004191	ENSGT00390000015719.c	ENSGT00940000155361	ENSGT00390000016565	ENSGT00900000143263	ENSGT00390000017418	ENSGT00940000160747 #19	ENSGT00940000156338 #21	ENSGT00950000182900.B #22	ENSGT00390000007371 #23	ENSGT00940000160932 #24	ENSGT00940000159398 #25	ENSGT00530000063929.a.b #26	ENSGT01060000248564.b.a.a.a #27	ENSGT00950000182962.b.a #28	ENSGT00390000018883 #29	ENSGT00940000157554 #30	ENSGT00940000160073 #32	ENSGT01000000214440.A.a.b.a #33	ENSGT00940000156115 #34	ENSGT00530000063770.c.a	ENSGT00390000010045	ENSGT00950000183182.a.a	ENSGT01090000260093.b
Marmotini	ANCESTRAL SPECIES		ENSGT00950000182802.B.a.a.a.a.i.b	ENSGT00940000159314	ENSGT00940000155194	ENSGT00390000013174	ENSGT00940000156585	ENSGT01090000260040.b.b.b.a	ENSGT00950000183172.B	ENSGT00390000004191	ENSGT00390000015719.c	ENSGT00940000155361	ENSGT00390000016565	ENSGT00900000143263	ENSGT00390000017418	ENSGT00940000160747 #19	ENSGT00940000156338 #21	ENSGT00950000182900.B #22	ENSGT00390000007371 #23	ENSGT00940000160932 #24	ENSGT00940000159398 #25	ENSGT00530000063929.a.b #26	ENSGT01060000248564.b.a.a.a #27	ENSGT00950000182962.b.a #28	ENSGT00390000018883 #29	ENSGT00940000157554 #30	ENSGT00940000160073 #32	ENSGT01000000214440.A.a.b.a #33	ENSGT00960000190607	ENSGT00940000156115 #34	ENSGT00530000063770.c.a	ENSGT00390000010045	ENSGT00950000183182.a.a
Alpin marmot	MODERN SPECIES	15	RPS6KA1 (ENSMMMG00000013808)	ARID1A (ENSMMMG00000013767)	PIGV (ENSMMMG00000013753)	ZDHHC18 (ENSMMMG00000013731)	SFN (ENSMMMG00000013728)	ENSMMMG00000013725	ENSMMMG00000013717	GPATCH3 (ENSMMMG00000013707)	NR0B2 (ENSMMMG00000013702)	NUDC (ENSMMMG00000013689)	KDF1 (ENSMMMG00000013677)	ENSMMMG00000013673	TRNP1 (ENSMMMG00000013667)	TENT5B (ENSMMMG00000013661) #19	SLC9A1 (ENSMMMG00000013639) #21	WDTC1 (ENSMMMG00000013616) #22	TMEM222 (ENSMMMG00000013607) #23	SYTL1 (ENSMMMG00000013574) #24	MAP3K6 (ENSMMMG00000013538) #25	CD164L2 (ENSMMMG00000013519) #26	GPR3 (ENSMMMG00000013517) #27	WASF2 (ENSMMMG00000013504) #28	FGR (ENSMMMG00000013453) #30	FAM76A (ENSMMMG00000013430) #32	STX12 (ENSMMMG00000013420) #33	ENSMMMG00000013416	PPP1R8 (ENSMMMG00000013396) #34	THEMIS2 (ENSMMMG00000013395)	RPA2 (ENSMMMG00000013382)	SMPDL3B (ENSMMMG00000013366)	XKR8 (ENSMMMG00000013348)
Marmotini_b	ANCESTRAL SPECIES		ENSGT00390000007879	ENSGT00950000182802.B.a.a.a.a.i.b	ENSGT00940000159314	ENSGT00940000155194	ENSGT00390000013174	ENSGT00940000156585	ENSGT01090000260040.b.b.b.a	ENSGT00950000183172.B	ENSGT00390000004191	ENSGT00390000015719.c	ENSGT00940000155361	ENSGT00390000016565	ENSGT00390000017418	ENSGT00940000160747 #19	ENSGT00940000156338 #21	ENSGT00950000182900.B #22	ENSGT00390000007371 #23	ENSGT00940000160932 #24	ENSGT00940000159398 #25	ENSGT00530000063929.a.b #26	ENSGT01060000248564.b.a.a.a #27	ENSGT00950000182962.b.a #28	ENSGT00390000018883 #29	ENSGT00940000157554 #30	ENSGT00940000160073 #32	ENSGT01000000214440.A.a.b.a #33	ENSGT00960000190607	ENSGT00940000156115 #34	ENSGT00530000063770.c.a	ENSGT00390000010045	ENSGT00950000183182.a.a
Squirrel	MODERN SPECIES	74	RPS6KA1 (ENSSTOG00000004355)	ENSSTOG00000022501	ENSSTOG00000031355	PIGV (ENSSTOG00000021148)	ZDHHC18 (ENSSTOG00000015208)	SFN (ENSSTOG00000015213)	GPN2 (ENSSTOG00000015216)	GPATCH3 (ENSSTOG00000015220)	NR0B2 (ENSSTOG00000024249)	NUDC (ENSSTOG00000021201)	KDF1 (ENSSTOG00000015233)	TENT5B (ENSSTOG00000022787) #19	ENSSTOG00000021677	ENSSTOG00000025429	SLC9A1 (ENSSTOG00000009815) #21	WDTC1 (ENSSTOG00000014225) #22	TMEM222 (ENSSTOG00000014234) #23	SYTL1 (ENSSTOG00000014242) #24	MAP3K6 (ENSSTOG00000014251) #25	CD164L2 (ENSSTOG00000024078) #26	GPR3 (ENSSTOG00000024790) #27	WASF2 (ENSSTOG00000003138) #28	AHDC1 (ENSSTOG00000025025) #29	FGR (ENSSTOG00000026717) #30	FAM76A (ENSSTOG00000004331) #32	STX12 (ENSSTOG00000019943) #33	PPP1R8 (ENSSTOG00000004381) #34	THEMIS2 (ENSSTOG00000034218)	RPA2 (ENSSTOG00000004433)	SMPDL3B (ENSSTOG00000004468)	XKR8 (ENSSTOG00000023254)
Arctic ground squirrel	MODERN SPECIES	92	RPS6KA1 (ENSUPAG00010021318)	ARID1A (ENSUPAG00010021300)	PIGV (ENSUPAG00010021291)	ZDHHC18 (ENSUPAG00010021282)	SFN (ENSUPAG00010021279)	GPN2 (ENSUPAG00010021274)	GPATCH3 (ENSUPAG00010021268)	NR0B2 (ENSUPAG00010021267)	NUDC (ENSUPAG00010021264)	KDF1 (ENSUPAG00010021258)	ENSUPAG00010021256	TRNP1 (ENSUPAG00010021254)	TENT5B (ENSUPAG00010021251) #19	ENSUPAG00010021249	SLC9A1 (ENSUPAG00010021229) #21	WDTC1 (ENSUPAG00010021189) #22	TMEM222 (ENSUPAG00010021173) #23	SYTL1 (ENSUPAG00010021146) #24	MAP3K6 (ENSUPAG00010021121) #25	CD164L2 (ENSUPAG00010021117) #26	GPR3 (ENSUPAG00010021112) #27	WASF2 (ENSUPAG00010021099) #28	AHDC1 (ENSUPAG00010021095) #29	FGR (ENSUPAG00010021065) #30	FAM76A (ENSUPAG00010021053) #32	STX12 (ENSUPAG00010021044) #33	ENSUPAG00010021039	PPP1R8 (ENSUPAG00010021025) #34	THEMIS2 (ENSUPAG00010021016)	SMPDL3B (ENSUPAG00010021005)	XKR8 (ENSUPAG00010020998)
Eurasian red squirrel	MODERN SPECIES		PIGV (ENSSVLG00005002744)	ZDHHC18 (ENSSVLG00005002759)	SFN (ENSSVLG00005002779)	GPN2 (ENSSVLG00005002789)	ENSSVLG00005002815	ENSSVLG00005002838	ENSSVLG00005002863	NR0B2 (ENSSVLG00005002872)	NUDC (ENSSVLG00005002888)	KDF1 (ENSSVLG00005002908)	ENSSVLG00005002925	TRNP1 (ENSSVLG00005002944)	TENT5B (ENSSVLG00005002952) #19	ENSSVLG00005002968	SLC9A1 (ENSSVLG00005002990) #21	WDTC1 (ENSSVLG00005003051) #22	TMEM222 (ENSSVLG00005003203) #23	SYTL1 (ENSSVLG00005003264) #24	MAP3K6 (ENSSVLG00005003393) #25	CD164L2 (ENSSVLG00005003518) #26	GPR3 (ENSSVLG00005003531) #27	WASF2 (ENSSVLG00005003551) #28	FGR (ENSSVLG00005003584) #30	FAM76A (ENSSVLG00005010519) #32	ENSSVLG00005010611	STX12 (ENSSVLG00005010643) #33	PPP1R8 (ENSSVLG00005010667) #34	THEMIS2 (ENSSVLG00005010773)	RPA2 (ENSSVLG00005010920)	SMPDL3B (ENSSVLG00005011082)	XKR8 (ENSSVLG00005011375)
Lagomorpha	ANCESTRAL SPECIES	21	ENSGT00940000153295.a.m.a	ENSGT00390000007879	ENSGT00950000182802.B.a.a.a.a.i.b	ENSGT00950000182802.B.a.a.a.b.a.b	ENSGT00940000159314	ENSGT00940000155194	ENSGT00390000013174	ENSGT00940000156585	ENSGT00950000183172.B	ENSGT00390000004191	ENSGT00390000015719.c	ENSGT00940000155361	ENSGT00390000016565	ENSGT00940000160747 #19	ENSGT00940000156338 #21	ENSGT00950000182900.B #22	ENSGT00390000007371 #23	ENSGT00940000160932 #24	ENSGT00940000159398 #25	ENSGT00530000063929.a.b #26	ENSGT01060000248564.b.a.a.a #27	ENSGT00950000182962.b.a #28	ENSGT00390000018883 #29	ENSGT00940000157554 #30	ENSGT00940000160073 #32	ENSGT00940000156115 #34	ENSGT00530000063770.c.a	ENSGT00390000010045	ENSGT00950000183182.a.a	ENSGT01090000260093.b	ENSGT00950000182978.B
Pika	MODERN SPECIES	3553																WDTC1 (ENSOPRG00000002127) #22	TMEM222 (ENSOPRG00000002159) #23	ENSOPRG00000002184 #24	MAP3K6 (ENSOPRG00000002203) #25	ENSOPRG00000002269	CD164L2 (ENSOPRG00000002306) #26	GPR3 (ENSOPRG00000002319) #27	WASF2 (ENSOPRG00000002324) #28
Rabbit	MODERN SPECIES	4	ZNF683 (ENSOCUG00000016978)	ENSOCUG00000000299	DHDDS (ENSOCUG00000016993)	ENSOCUG00000032486	RPS6KA1 (ENSOCUG00000010887)	ARID1A (ENSOCUG00000005314)	PIGV (ENSOCUG00000017959)	ZDHHC18 (ENSOCUG00000006400)	ENSOCUG00000006407	GPATCH3 (ENSOCUG00000006411)	NR0B2 (ENSOCUG00000006416)	NUDC (ENSOCUG00000006418)	KDF1 (ENSOCUG00000006421)	ENSOCUG00000006426 #19	SLC9A1 (ENSOCUG00000023061) #21	WDTC1 (ENSOCUG00000016358) #22	TMEM222 (ENSOCUG00000007371) #23	SYTL1 (ENSOCUG00000002371) #24	MAP3K6 (ENSOCUG00000002379) #25	ENSOCUG00000007587 #26	GPR3 (ENSOCUG00000027272) #27	WASF2 (ENSOCUG00000002394) #28	AHDC1 (ENSOCUG00000008914) #29	FGR (ENSOCUG00000008922) #30	FAM76A (ENSOCUG00000014830) #32	PPP1R8 (ENSOCUG00000013594) #34	SMPDL3B (ENSOCUG00000012589)	EYA3 (ENSOCUG00000008020)	PTAFR (ENSOCUG00000017831)	ENSOCUG00000017932	SESN2 (ENSOCUG00000014896)
Tree shrew	MODERN SPECIES	2081																ENSTBEG00000013912 #22
Primates	ANCESTRAL SPECIES	4	ENSGT00390000007879	ENSGT00950000182802.B.a.a.a.a.h.b	ENSGT00940000159314	ENSGT00940000155194	ENSGT00390000013174	ENSGT00940000156585	ENSGT01090000260040.b.b.b.a	ENSGT00950000183172.B	ENSGT00390000004191	ENSGT00390000015719.c	ENSGT00940000155361	ENSGT00390000016565	ENSGT00390000017418	ENSGT00940000160747 #19	ENSGT00940000156338 #21	ENSGT00950000182900.B #22	ENSGT00390000007371 #23	ENSGT00940000160932 #24	ENSGT00940000159398 #25	ENSGT00940000163188	ENSGT00530000063929.a.b #26	ENSGT01060000248564.b.a.a.a #27	ENSGT00950000182962.b.a #28	ENSGT00390000018883 #29	ENSGT00940000157554 #30	ENSGT00940000163178	ENSGT00940000160073 #32	ENSGT01000000214440.A.a.b.a #33	ENSGT00940000156115 #34	ENSGT00530000063770.c.a	ENSGT00390000010045
Strepsirrhini	ANCESTRAL SPECIES		ENSGT00390000007879	ENSGT00950000182802.B.a.a.a.a.h.a.a.b.a.a.d	ENSGT00940000159314	ENSGT00940000155194	ENSGT00390000013174	ENSGT00940000156585	ENSGT01090000260040.b.b.b.a	ENSGT00950000183172.B	ENSGT00390000004191	ENSGT00390000015719.c	ENSGT00940000155361	ENSGT00390000016565	ENSGT00390000017418	ENSGT00940000160747 #19	ENSGT00940000156338 #21	ENSGT00950000182900.B #22	ENSGT00390000007371 #23	ENSGT00940000160932 #24	ENSGT00940000159398 #25	ENSGT00940000163188	ENSGT00530000063929.a.b #26	ENSGT01060000248564.b.a.a.a #27	ENSGT00950000182962.b.a #28	ENSGT00390000018883 #29	ENSGT00940000157554 #30	ENSGT00940000163178	ENSGT00940000160073 #32	ENSGT01000000214440.A.a.b.a #33	ENSGT00940000156115 #34	ENSGT00530000063770.c.a	ENSGT00390000010045
Bushbaby	MODERN SPECIES	271	DHDDS (ENSOGAG00000003973)	ENSOGAG00000032571	RPS6KA1 (ENSOGAG00000003977)	ARID1A (ENSOGAG00000002450)	PIGV (ENSOGAG00000029083)	ZDHHC18 (ENSOGAG00000007934)	SFN (ENSOGAG00000004791)	GPN2 (ENSOGAG00000033911)	GPATCH3 (ENSOGAG00000011647)	NR0B2 (ENSOGAG00000002078)	NUDC (ENSOGAG00000002080)	KDF1 (ENSOGAG00000002084)	TRNP1 (ENSOGAG00000029493)	TENT5B (ENSOGAG00000002086) #19	SLC9A1 (ENSOGAG00000002087) #21	WDTC1 (ENSOGAG00000015076) #22	TMEM222 (ENSOGAG00000015081) #23	SYTL1 (ENSOGAG00000015086) #24	MAP3K6 (ENSOGAG00000015094) #25	FCN3 (ENSOGAG00000015106)	CD164L2 (ENSOGAG00000015109) #26	GPR3 (ENSOGAG00000029314) #27	WASF2 (ENSOGAG00000033524) #28	AHDC1 (ENSOGAG00000034492) #29	FGR (ENSOGAG00000015559) #30	IFI6 (ENSOGAG00000027393)	FAM76A (ENSOGAG00000015566) #32	STX12 (ENSOGAG00000015570) #33	ENSOGAG00000015577 #34	EYA3 (ENSOGAG00000015592)	THEMIS2 (ENSOGAG00000015580)
Lemuriformes	ANCESTRAL SPECIES		ENSGT00390000007879	ENSGT00950000182802.B.a.a.a.a.h.a.a.b.a.a.d	ENSGT00940000159314	ENSGT00940000155194	ENSGT00390000013174	ENSGT00940000156585	ENSGT01090000260040.b.b.b.a	ENSGT00950000183172.B	ENSGT00390000004191	ENSGT00390000015719.c	ENSGT00940000155361	ENSGT00390000016565	ENSGT00390000017418	ENSGT00940000160747 #19	ENSGT00940000156338 #21	ENSGT00950000182900.B #22	ENSGT00390000007371 #23	ENSGT00940000160932 #24	ENSGT00940000159398 #25	ENSGT00940000163188	ENSGT00530000063929.a.b #26	ENSGT01060000248564.b.a.a.a #27	ENSGT00950000182962.b.a #28	ENSGT00390000018883 #29	ENSGT00940000157554 #30	ENSGT00940000163178	ENSGT00940000160073 #32	ENSGT01000000214440.A.a.b.a #33	ENSGT00940000156115 #34	ENSGT00530000063770.c.a	ENSGT00390000010045
Lemuriformes_a	ANCESTRAL SPECIES	7	ENSGT00390000007879	ENSGT00950000182802.B.a.a.a.a.h.a.a.b.a.a.d.b.b	ENSGT00940000159314	ENSGT00940000155194	ENSGT00390000013174	ENSGT00940000156585	ENSGT01090000260040.b.b.b.a	ENSGT00950000183172.B	ENSGT00390000004191	ENSGT00390000015719.c	ENSGT00940000155361	ENSGT00390000016565	ENSGT00390000017418	ENSGT00940000160747 #19	ENSGT00940000156338 #21	ENSGT00950000182900.B #22	ENSGT00390000007371 #23	ENSGT00940000160932 #24	ENSGT00940000159398 #25	ENSGT00940000163188	ENSGT00530000063929.a.b #26	ENSGT01060000248564.b.a.a.a #27	ENSGT00950000182962.b.a #28	ENSGT00390000018883 #29	ENSGT00940000157554 #30	ENSGT00940000163178	ENSGT00940000160073 #32	ENSGT01000000214440.A.a.b.a #33	ENSGT00940000156115 #34	ENSGT00530000063770.c.a	ENSGT00390000010045
Coquerels sifaka	MODERN SPECIES	344	DHDDS (ENSPCOG00000027819)	ENSPCOG00000014843	RPS6KA1 (ENSPCOG00000018267)	ARID1A (ENSPCOG00000025094)	PIGV (ENSPCOG00000027020)	ZDHHC18 (ENSPCOG00000019142)	SFN (ENSPCOG00000005323)	GPN2 (ENSPCOG00000016261)	GPATCH3 (ENSPCOG00000020145)	NR0B2 (ENSPCOG00000024094)	NUDC (ENSPCOG00000026222)	KDF1 (ENSPCOG00000017396)	ENSPCOG00000023329	TENT5B (ENSPCOG00000011763) #19	SLC9A1 (ENSPCOG00000028671) #21	WDTC1 (ENSPCOG00000019286) #22	TMEM222 (ENSPCOG00000015289) #23	SYTL1 (ENSPCOG00000017349) #24	MAP3K6 (ENSPCOG00000027489) #25	FCN3 (ENSPCOG00000024318)	CD164L2 (ENSPCOG00000008888) #26	GPR3 (ENSPCOG00000007979) #27	WASF2 (ENSPCOG00000018308) #28	AHDC1 (ENSPCOG00000012355) #29	FGR (ENSPCOG00000021101) #30	IFI6 (ENSPCOG00000019541)	FAM76A (ENSPCOG00000017956) #32	STX12 (ENSPCOG00000014712) #33	PPP1R8 (ENSPCOG00000013455) #34	THEMIS2 (ENSPCOG00000002667)	RPA2 (ENSPCOG00000023673)
Greater bamboo lemur	MODERN SPECIES	1450						ENSPSMG00000010454	SFN (ENSPSMG00000010457)	GPN2 (ENSPSMG00000010473)	GPATCH3 (ENSPSMG00000010483)	NR0B2 (ENSPSMG00000010494)	NUDC (ENSPSMG00000010524)	KDF1 (ENSPSMG00000010553)	TRNP1 (ENSPSMG00000010554)	TENT5B (ENSPSMG00000010558) #19	SLC9A1 (ENSPSMG00000010577) #21	WDTC1 (ENSPSMG00000010594) #22	TMEM222 (ENSPSMG00000010644) #23	SYTL1 (ENSPSMG00000010722) #24	MAP3K6 (ENSPSMG00000010780) #25	FCN3 (ENSPSMG00000010819)	CD164L2 (ENSPSMG00000010838) #26	GPR3 (ENSPSMG00000010843) #27
Mouse lemur	MODERN SPECIES	11	DHDDS (ENSMICG00000013680)	ENSMICG00000032007	RPS6KA1 (ENSMICG00000007848)	ENSMICG00000035320	ARID1A (ENSMICG00000015610)	PIGV (ENSMICG00000046640)	ZDHHC18 (ENSMICG00000015639)	SFN (ENSMICG00000015648)	GPN2 (ENSMICG00000029529)	GPATCH3 (ENSMICG00000015656)	NR0B2 (ENSMICG00000032290)	NUDC (ENSMICG00000027846)	KDF1 (ENSMICG00000043402)	TENT5B (ENSMICG00000033781) #19	SLC9A1 (ENSMICG00000015698) #21	WDTC1 (ENSMICG00000015711) #22	TMEM222 (ENSMICG00000015726) #23	SYTL1 (ENSMICG00000015733) #24	MAP3K6 (ENSMICG00000015758) #25	FCN3 (ENSMICG00000015785)	CD164L2 (ENSMICG00000015791) #26	GPR3 (ENSMICG00000044683) #27	WASF2 (ENSMICG00000015799) #28	AHDC1 (ENSMICG00000029375) #29	FGR (ENSMICG00000006166) #30	IFI6 (ENSMICG00000008189)	FAM76A (ENSMICG00000038656) #32	ENSMICG00000011066 #33	PPP1R8 (ENSMICG00000043807) #34	ENSMICG00000036349	THEMIS2 (ENSMICG00000011084)
Haplorrhini	ANCESTRAL SPECIES	1	ENSGT00390000007879	ENSGT00950000182802.B.a.a.a.a.h.b.a.a.a	ENSGT00940000159314	ENSGT00940000155194	ENSGT00390000013174	ENSGT00940000156585	ENSGT01090000260040.b.b.b.a	ENSGT00950000183172.B	ENSGT00390000004191	ENSGT00390000015719.c	ENSGT00940000155361	ENSGT00390000016565	ENSGT00390000017418	ENSGT00940000160747 #19	ENSGT00940000156338 #21	ENSGT00950000182900.B #22	ENSGT00390000007371 #23	ENSGT00940000160932 #24	ENSGT00940000159398 #25	ENSGT00940000163188	ENSGT00530000063929.a.b #26	ENSGT01060000248564.b.a.a.a #27	ENSGT00950000182962.b.a #28	ENSGT00390000018883 #29	ENSGT00940000157554 #30	ENSGT00940000163178	ENSGT00940000160073 #32	ENSGT01000000214440.A.a.b.a #33	ENSGT00940000156115 #34	ENSGT00530000063770.c.a	ENSGT00390000010045
Tarsier	MODERN SPECIES	4840							ZDHHC18 (ENSTSYG00000009773)	SFN (ENSTSYG00000013087)	GPN2 (ENSTSYG00000011752)	GPATCH3 (ENSTSYG00000011753)	NR0B2 (ENSTSYG00000033702)	NUDC (ENSTSYG00000003312)	KDF1 (ENSTSYG00000027104)	FAM46B (ENSTSYG00000035698) #19	SLC9A1 (ENSTSYG00000035533) #21	WDTC1 (ENSTSYG00000028104) #22	TMEM222 (ENSTSYG00000033362) #23	SYTL1 (ENSTSYG00000029347) #24	MAP3K6 (ENSTSYG00000012237) #25	FCN3 (ENSTSYG00000012269)	CD164L2 (ENSTSYG00000033975) #26	GPR3 (ENSTSYG00000034225) #27	WASF2 (ENSTSYG00000014297) #28	AHDC1 (ENSTSYG00000010630) #29	FGR (ENSTSYG00000030870) #30	IFI6 (ENSTSYG00000001596)	FAM76A (ENSTSYG00000004933) #32	STX12 (ENSTSYG00000035844) #33	PPP1R8 (ENSTSYG00000010379) #34	THEMIS2 (ENSTSYG00000031992)	RPA2 (ENSTSYG00000010706)
Simiiformes	ANCESTRAL SPECIES	3	ENSGT00390000007879	ENSGT00950000182802.B.a.a.a.a.h.b.a.a.a	ENSGT00940000159314	ENSGT00940000155194	ENSGT00390000013174	ENSGT00940000156585	ENSGT01090000260040.b.b.b.a	ENSGT00950000183172.B	ENSGT00390000004191	ENSGT00390000015719.c	ENSGT00940000155361	ENSGT00390000016565	ENSGT00390000017418	ENSGT00940000160747 #19	ENSGT00940000156338 #21	ENSGT00950000182900.B #22	ENSGT00390000007371 #23	ENSGT00940000160932 #24	ENSGT00940000159398 #25	ENSGT00940000163188	ENSGT00530000063929.a.b #26	ENSGT01060000248564.b.a.a.a #27	ENSGT00950000182962.b.a #28	ENSGT00390000018883 #29	ENSGT00940000157554 #30	ENSGT00940000163178	ENSGT00940000160073 #32	ENSGT01000000214440.A.a.b.a #33	ENSGT00940000156115 #34	ENSGT00530000063770.c.a	ENSGT00390000010045.g.b
Platyrrhini	ANCESTRAL SPECIES		ENSGT00950000182802.B.a.a.a.a.h.b.a.a.a	ENSGT00950000182802.B.a.a.a.a.h.b.b	ENSGT00940000159314	ENSGT00940000155194	ENSGT00390000013174	ENSGT00940000156585	ENSGT01090000260040.b.b.b.a	ENSGT00950000183172.B	ENSGT00390000004191	ENSGT00390000015719.c	ENSGT00940000155361	ENSGT00390000016565	ENSGT00390000017418	ENSGT00940000160747 #19	ENSGT00940000156338 #21	ENSGT00950000182900.B #22	ENSGT00390000007371 #23	ENSGT00940000160932 #24	ENSGT00940000159398 #25	ENSGT00940000163188	ENSGT00530000063929.a.b #26	ENSGT01060000248564.b.a.a.a #27	ENSGT00950000182962.b.a #28	ENSGT00390000018883 #29	ENSGT00940000157554 #30	ENSGT00940000163178	ENSGT00940000160073 #32	ENSGT01000000214440.A.a.b.a #33	ENSGT00940000156115 #34	ENSGT00530000063770.c.a	ENSGT00390000010045.g.b.a
Cebidae	ANCESTRAL SPECIES	1	ENSGT00390000007879.a	ENSGT00950000182802.B.a.a.a.a.h.a.a.a.a	ENSGT00940000159314	ENSGT00940000155194	ENSGT00390000013174	ENSGT00940000156585	ENSGT01090000260040.b.b.b.a	ENSGT00950000183172.B	ENSGT00390000004191	ENSGT00390000015719.c	ENSGT00940000155361	ENSGT00390000016565	ENSGT00390000017418	ENSGT00940000160747 #19	ENSGT00940000156338 #21	ENSGT00950000182900.B #22	ENSGT00390000007371 #23	ENSGT00940000160932 #24	ENSGT00940000159398 #25	ENSGT00940000163188	ENSGT00530000063929.a.b #26	ENSGT01060000248564.b.a.a.a #27	ENSGT00950000182962.b.a #28	ENSGT00390000018883 #29	ENSGT00940000157554 #30	ENSGT00940000163178	ENSGT00940000160073 #32	ENSGT01000000214440.A.a.b.a #33	ENSGT00940000156115 #34	ENSGT00530000063770.c.a	ENSGT00390000010045.g.b.a
Marmoset	MODERN SPECIES	19	ENSCJAG00000060928	ARID1A (ENSCJAG00000009833)	PIGV (ENSCJAG00000042636)	ZDHHC18 (ENSCJAG00000009969)	SFN (ENSCJAG00000047214)	GPN2 (ENSCJAG00000009981)	GPATCH3 (ENSCJAG00000010000)	NR0B2 (ENSCJAG00000010029)	NUDC (ENSCJAG00000010033)	KDF1 (ENSCJAG00000010076)	TRNP1 (ENSCJAG00000046636)	TENT5B (ENSCJAG00000060780) #19	ENSCJAG00000083746	ENSCJAG00000072688	SLC9A1 (ENSCJAG00000009011) #21	WDTC1 (ENSCJAG00000009088) #22	TMEM222 (ENSCJAG00000009112) #23	SYTL1 (ENSCJAG00000009140) #24	MAP3K6 (ENSCJAG00000009171) #25	FCN3 (ENSCJAG00000009233)	CD164L2 (ENSCJAG00000009245) #26	GPR3 (ENSCJAG00000009260) #27	WASF2 (ENSCJAG00000009264) #28	AHDC1 (ENSCJAG00000009280) #29	FGR (ENSCJAG00000009293) #30	IFI6 (ENSCJAG00000009319)	FAM76A (ENSCJAG00000009327) #32	ENSCJAG00000077742	STX12 (ENSCJAG00000009378) #33	PPP1R8 (ENSCJAG00000009406) #34	ENSCJAG00000009445
Cebidae_a	ANCESTRAL SPECIES		ENSGT00390000007879.a	ENSGT00950000182802.B.a.a.a.a.h.a.a.a.a	ENSGT00390000016475.e.a	ENSGT00940000159314	ENSGT00940000155194	ENSGT00390000013174	ENSGT00940000156585	ENSGT01090000260040.b.b.b.a	ENSGT00950000183172.B	ENSGT00390000004191	ENSGT00390000015719.c	ENSGT00940000155361	ENSGT00390000016565	ENSGT00940000160747 #19	ENSGT00940000156338 #21	ENSGT00950000182900.B #22	ENSGT00390000007371 #23	ENSGT00940000160932 #24	ENSGT00940000159398 #25	ENSGT00940000163188	ENSGT00530000063929.a.b #26	ENSGT01060000248564.b.a.a.a #27	ENSGT00950000182962.b.a #28	ENSGT00390000018883 #29	ENSGT00940000157554 #30	ENSGT00940000163178	ENSGT00940000160073 #32	ENSGT01000000214440.A.a.b.a #33	ENSGT00940000156115 #34	ENSGT00530000063770.c.a	ENSGT00390000010045.g.b.a
Capuchin	MODERN SPECIES	87	RPS6KA1 (ENSCCAG00000036996)	ARID1A (ENSCCAG00000035027)	PIGV (ENSCCAG00000036607)	ENSCCAG00000033628	ZDHHC18 (ENSCCAG00000037044)	SFN (ENSCCAG00000018889)	GPN2 (ENSCCAG00000027501)	GPATCH3 (ENSCCAG00000030482)	NR0B2 (ENSCCAG00000030627)	NUDC (ENSCCAG00000033425)	KDF1 (ENSCCAG00000015434)	ENSCCAG00000020074	ENSCCAG00000028136	TENT5B (ENSCCAG00000036493) #19	SLC9A1 (ENSCCAG00000026782) #21	WDTC1 (ENSCCAG00000026157) #22	SYTL1 (ENSCCAG00000024708) #24	MAP3K6 (ENSCCAG00000019188) #25	FCN3 (ENSCCAG00000022265)	CD164L2 (ENSCCAG00000023007) #26	GPR3 (ENSCCAG00000000295) #27	WASF2 (ENSCCAG00000033324) #28	ENSCCAG00000019701	AHDC1 (ENSCCAG00000019652) #29	FGR (ENSCCAG00000026723) #30	IFI6 (ENSCCAG00000033587)	FAM76A (ENSCCAG00000032340) #32	ENSCCAG00000031655	STX12 (ENSCCAG00000023253) #33	PPP1R8 (ENSCCAG00000025347) #34	THEMIS2 (ENSCCAG00000035270)
Bolivian squirrel monkey	MODERN SPECIES	44	ENSSBOG00000027959	THSD7A (ENSSBOG00000022829)	ARID1A (ENSSBOG00000021791)	PIGV (ENSSBOG00000031404)	ZDHHC18 (ENSSBOG00000027289)	SFN (ENSSBOG00000010021)	ENSSBOG00000021731	GPN2 (ENSSBOG00000031587)	GPATCH3 (ENSSBOG00000019680)	NR0B2 (ENSSBOG00000026068)	NUDC (ENSSBOG00000035376)	KDF1 (ENSSBOG00000022048)	TENT5B (ENSSBOG00000023376) #19	SLC9A1 (ENSSBOG00000034296) #21	ENSSBOG00000026222	WDTC1 (ENSSBOG00000024363) #22	TMEM222 (ENSSBOG00000031879) #23	SYTL1 (ENSSBOG00000022361) #24	MAP3K6 (ENSSBOG00000022232) #25	FCN3 (ENSSBOG00000035705)	CD164L2 (ENSSBOG00000016074) #26	GPR3 (ENSSBOG00000015463) #27	WASF2 (ENSSBOG00000022556) #28	ENSSBOG00000002550	AHDC1 (ENSSBOG00000026685) #29	FGR (ENSSBOG00000033596) #30	IFI6 (ENSSBOG00000034960)	FAM76A (ENSSBOG00000026158) #32	STX12 (ENSSBOG00000014436) #33	PPP1R8 (ENSSBOG00000032910) #34
Mas night monkey	MODERN SPECIES	1281	ZDHHC18 (ENSANAG00000034211)	SFN (ENSANAG00000016141)	ENSANAG00000020454	ENSANAG00000019689	ENSANAG00000026846	GPN2 (ENSANAG00000035449)	GPATCH3 (ENSANAG00000035944)	NR0B2 (ENSANAG00000021024)	NUDC (ENSANAG00000028557)	KDF1 (ENSANAG00000027498)	ENSANAG00000021922	TRNP1 (ENSANAG00000032266)	TENT5B (ENSANAG00000028081) #19	ENSANAG00000016046	SLC9A1 (ENSANAG00000028650) #21	WDTC1 (ENSANAG00000025177) #22	ENSANAG00000023312	TMEM222 (ENSANAG00000029313) #23	SYTL1 (ENSANAG00000028160) #24	MAP3K6 (ENSANAG00000027054) #25	FCN3 (ENSANAG00000030001)	CD164L2 (ENSANAG00000024020) #26	GPR3 (ENSANAG00000016515) #27	WASF2 (ENSANAG00000029609) #28	AHDC1 (ENSANAG00000026196) #29	FGR (ENSANAG00000033090) #30	IFI6 (ENSANAG00000034223)	FAM76A (ENSANAG00000034741) #32	STX12 (ENSANAG00000034764) #33	PPP1R8 (ENSANAG00000011047) #34	THEMIS2 (ENSANAG00000032929)
Catarrhini	ANCESTRAL SPECIES	3	ENSGT00950000182802.B.a.a.a.a.h.b.a.a.a	ENSGT00940000159314	ENSGT00940000155194	ENSGT00390000013174	ENSGT00940000156585	ENSGT01090000260040.b.b.b.a	ENSGT00950000183172.B	ENSGT00390000004191	ENSGT00390000015719.c	ENSGT00940000155361	ENSGT00390000016565	ENSGT00390000001376.bb.a.a	ENSGT00390000017418	ENSGT00940000160747 #19	ENSGT00940000156338 #21	ENSGT00950000182900.B #22	ENSGT00390000007371 #23	ENSGT00940000160932 #24	ENSGT00940000159398 #25	ENSGT00940000163188	ENSGT00530000063929.a.b #26	ENSGT01060000248564.b.a.a.a #27	ENSGT00950000182962.b.a #28	ENSGT00390000018883 #29	ENSGT00940000157554 #30	ENSGT00940000163178	ENSGT00940000160073 #32	ENSGT00390000001447.q	ENSGT01000000214440.A.a.b.a #33	ENSGT00940000156115 #34	ENSGT00530000063770.c.a
Hominoidea	ANCESTRAL SPECIES	3	ENSGT00950000182802.B.a.a.a.a.i.b	ENSGT00940000159314	ENSGT00940000155194	ENSGT00390000013174	ENSGT00940000156585	ENSGT01090000260040.b.b.b.a	ENSGT00950000183172.B	ENSGT00390000004191	ENSGT00390000015719.c	ENSGT00940000155361	ENSGT00390000016565	ENSGT00390000001376.bb.a.a	ENSGT00390000017418	ENSGT00940000160747 #19	ENSGT00940000156338 #21	ENSGT00950000182900.B #22	ENSGT00390000007371 #23	ENSGT00940000160932 #24	ENSGT00940000159398 #25	ENSGT00940000163188	ENSGT00530000063929.a.b #26	ENSGT01060000248564.b.a.a.a #27	ENSGT00950000182962.b.a.h #28	ENSGT00390000018883 #29	ENSGT00940000157554 #30	ENSGT00940000163178	ENSGT00940000160073 #32	ENSGT00390000001447.q	ENSGT01000000214440.A.a.b.a #33	ENSGT00940000156115 #34	ENSGT00550000076274
Hominidae	ANCESTRAL SPECIES	3	ENSGT00950000182802.B.a.a.a.a.i.b	ENSGT00940000159314	ENSGT00940000155194	ENSGT00390000013174	ENSGT00940000156585	ENSGT01090000260040.b.b.b.a	ENSGT00950000183172.B	ENSGT00390000004191	ENSGT00390000015719.c	ENSGT00940000155361	ENSGT00390000016565	ENSGT00390000001376.bb.a.a	ENSGT00390000017418	ENSGT00940000160747 #19	ENSGT00940000156338 #21	ENSGT00950000182900.B #22	ENSGT00390000007371 #23	ENSGT00940000160932 #24	ENSGT00940000159398 #25	ENSGT00940000163188	ENSGT00530000063929.a.b #26	ENSGT01060000248564.b.a.a.a #27	ENSGT00950000182962.b.a.h #28	ENSGT00390000018883 #29	ENSGT00940000157554 #30	ENSGT00940000163178	ENSGT00940000160073 #32	ENSGT01000000214440.A.a.b.a #33	ENSGT00940000156115 #34	ENSGT00550000076274	ENSGT00530000063770.c.a
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	3	ENSGT00950000182802.B.a.a.a.a.h.b.a.a.a	ENSGT00940000159314	ENSGT00940000155194	ENSGT00390000013174	ENSGT00940000156585	ENSGT01090000260040.b.b.b.a	ENSGT00950000183172.B	ENSGT00390000004191	ENSGT00390000015719.c	ENSGT00940000155361	ENSGT00390000016565	ENSGT00390000001376.bb.a.a	ENSGT00390000017418	ENSGT00940000160747 #19	ENSGT00940000156338 #21	ENSGT00950000182900.B #22	ENSGT00390000007371 #23	ENSGT00940000160932 #24	ENSGT00940000159398 #25	ENSGT00940000163188	ENSGT00530000063929.a.b #26	ENSGT01060000248564.b.a.a.a #27	ENSGT00950000182962.b.a.h #28	ENSGT00390000018883 #29	ENSGT00940000157554 #30	ENSGT00940000163178	ENSGT00940000160073 #32	ENSGT01000000214440.A.a.b.a #33	ENSGT00940000156115 #34	ENSGT00550000076274	ENSGT00530000063770.c.a
Gorilla	MODERN SPECIES		ARID1A (ENSGGOG00000004967)	PIGV (ENSGGOG00000004975)	SFN (ENSGGOG00000011493)	GPN2 (ENSGGOG00000015301)	GPATCH3 (ENSGGOG00000015305)	NR0B2 (ENSGGOG00000015311)	NUDC (ENSGGOG00000015314)	KDF1 (ENSGGOG00000023640)	ENSGGOG00000042470	TENT5B (ENSGGOG00000008075) #19	SLC9A1 (ENSGGOG00000001596) #21	ENSGGOG00000043274	ENSGGOG00000040604	ENSGGOG00000022556	ENSGGOG00000000755	WDTC1 (ENSGGOG00000012009) #22	TMEM222 (ENSGGOG00000000040) #23	SYTL1 (ENSGGOG00000000043) #24	MAP3K6 (ENSGGOG00000000045) #25	FCN3 (ENSGGOG00000000047)	CD164L2 (ENSGGOG00000025436) #26	GPR3 (ENSGGOG00000041212) #27	WASF2 (ENSGGOG00000004436) #28	AHDC1 (ENSGGOG00000014466) #29	FGR (ENSGGOG00000000775) #30	IFI6 (ENSGGOG00000000776)	FAM76A (ENSGGOG00000006690) #32	STX12 (ENSGGOG00000001668) #33	PPP1R8 (ENSGGOG00000012062) #34	ENSGGOG00000043200	ENSGGOG00000040440
Homo/Pan group	ANCESTRAL SPECIES	4	ENSGT00950000182802.B.a.a.a.a.h.b.a.a.a	ENSGT00940000159314	ENSGT00940000155194	ENSGT00390000013174	ENSGT00940000156585	ENSGT01090000260040.b.b.b.a	ENSGT00950000183172.B	ENSGT00390000004191	ENSGT00390000015719.c	ENSGT00940000155361	ENSGT00390000016565	ENSGT00390000001376.bb.a.a	ENSGT00390000017418	ENSGT00940000160747 #19	ENSGT00940000156338 #21	ENSGT00950000182900.B #22	ENSGT00390000007371 #23	ENSGT00940000160932 #24	ENSGT00940000159398 #25	ENSGT00940000163188	ENSGT00530000063929.a.b #26	ENSGT01060000248564.b.a.a.a #27	ENSGT00950000182962.b.a.h #28	ENSGT00390000018883 #29	ENSGT00940000157554 #30	ENSGT00940000163178	ENSGT00940000160073 #32	ENSGT01000000214440.A.a.b.a #33	ENSGT00940000156115 #34	ENSGT00550000076274	ENSGT00530000063770.c.a
Human	MODERN SPECIES		DHDDS (ENSG00000117682)	HMGN2 (ENSG00000198830)	RPS6KA1 (ENSG00000117676)	ARID1A (ENSG00000117713)	PIGV (ENSG00000060642)	ZDHHC18 (ENSG00000204160)	SFN (ENSG00000175793)	GPN2 (ENSG00000142751)	GPATCH3 (ENSG00000198746)	NUDC (ENSG00000090273)	NR0B2 (ENSG00000131910)	KDF1 (ENSG00000175707)	TRNP1 (ENSG00000253368)	TENT5B (ENSG00000158246) #19	SLC9A1 (ENSG00000090020) #21	WDTC1 (ENSG00000142784) #22	TMEM222 (ENSG00000186501) #23	SYTL1 (ENSG00000142765) #24	MAP3K6 (ENSG00000142733) #25	FCN3 (ENSG00000142748)	CD164L2 (ENSG00000174950) #26	GPR3 (ENSG00000181773) #27	WASF2 (ENSG00000158195) #28	AHDC1 (ENSG00000126705) #29	FGR (ENSG00000000938) #30	IFI6 (ENSG00000126709)	FAM76A (ENSG00000009780) #32	STX12 (ENSG00000117758) #33	PPP1R8 (ENSG00000117751) #34	THEMIS2 (ENSG00000130775)	RPA2 (ENSG00000117748)
Pan	ANCESTRAL SPECIES		ENSGT00390000013174	ENSGT00940000156585	ENSGT01090000260040.b.b.b.a	ENSGT00950000183172.B	ENSGT00390000004191	ENSGT00390000015719.c	ENSGT00940000155361	ENSGT00390000016565	ENSGT00390000001376.bb.a.a	ENSGT00390000017418	ENSGT00940000160747 #19	ENSGT00940000156338 #21	ENSGT00390000000903.a.f.a	ENSGT00940000153052.c.b.a.a.a.a.a.a.a.c	ENSGT00390000012818.o.a.b	ENSGT00950000182900.B #22	ENSGT00390000007371 #23	ENSGT00940000160932 #24	ENSGT00940000159398 #25	ENSGT00940000163188	ENSGT00530000063929.a.b #26	ENSGT01060000248564.b.a.a.a #27	ENSGT00950000182962.b.a.h #28	ENSGT00390000018883 #29	ENSGT00940000157554 #30	ENSGT00390000003710.d.c.a	ENSGT00940000163178	ENSGT00940000160073 #32	ENSGT01000000214440.A.a.b.a #33	ENSGT00940000156115 #34	ENSGT00550000076274
Bonobo	MODERN SPECIES		ARID1A (ENSPPAG00000035294)	PIGV (ENSPPAG00000033338)	ZDHHC18 (ENSPPAG00000031507)	SFN (ENSPPAG00000013397)	GPN2 (ENSPPAG00000039790)	GPATCH3 (ENSPPAG00000032902)	NR0B2 (ENSPPAG00000039413)	NUDC (ENSPPAG00000000217)	KDF1 (ENSPPAG00000030084)	ENSPPAG00000041792	TENT5B (ENSPPAG00000035934) #19	SLC9A1 (ENSPPAG00000043811) #21	ENSPPAG00000031182	ENSPPAG00000027951	ENSPPAG00000040781	WDTC1 (ENSPPAG00000030849) #22	TMEM222 (ENSPPAG00000027696) #23	SYTL1 (ENSPPAG00000011464) #24	MAP3K6 (ENSPPAG00000040813) #25	FCN3 (ENSPPAG00000038009)	CD164L2 (ENSPPAG00000031928) #26	GPR3 (ENSPPAG00000016740) #27	WASF2 (ENSPPAG00000041993) #28	FGR (ENSPPAG00000029323) #30	ENSPPAG00000005765	IFI6 (ENSPPAG00000031946)	FAM76A (ENSPPAG00000033431) #32	STX12 (ENSPPAG00000041257) #33	PPP1R8 (ENSPPAG00000036845) #34	ENSPPAG00000004249	THEMIS2 (ENSPPAG00000031100)
Chimpanzee	MODERN SPECIES		PIGV (ENSPTRG00000047988)	ZDHHC18 (ENSPTRG00000051743)	SFN (ENSPTRG00000030723)	GPN2 (ENSPTRG00000000392)	GPATCH3 (ENSPTRG00000023419)	NR0B2 (ENSPTRG00000000394)	NUDC (ENSPTRG00000000395)	KDF1 (ENSPTRG00000000396)	ENSPTRG00000044717	TRNP1 (ENSPTRG00000046384)	TENT5B (ENSPTRG00000000397) #19	SLC9A1 (ENSPTRG00000051037) #21	ENSPTRG00000042092	ENSPTRG00000052422	ENSPTRG00000044112	WDTC1 (ENSPTRG00000000401) #22	TMEM222 (ENSPTRG00000000402) #23	SYTL1 (ENSPTRG00000000403) #24	MAP3K6 (ENSPTRG00000000404) #25	FCN3 (ENSPTRG00000000405)	CD164L2 (ENSPTRG00000000406) #26	GPR3 (ENSPTRG00000044871) #27	WASF2 (ENSPTRG00000000409) #28	AHDC1 (ENSPTRG00000000410) #29	FGR (ENSPTRG00000000411) #30	ENSPTRG00000040060	IFI6 (ENSPTRG00000000413)	FAM76A (ENSPTRG00000000414) #32	STX12 (ENSPTRG00000000416) #33	PPP1R8 (ENSPTRG00000000417) #34	ENSPTRG00000052043
Orangutan	MODERN SPECIES		RPS6KA1 (ENSPPYG00000001681)	ARID1A (ENSPPYG00000001680)	PIGV (ENSPPYG00000001679)	ZDHHC18 (ENSPPYG00000001678)	SFN (ENSPPYG00000001677)	GPN2 (ENSPPYG00000001676)	GPATCH3 (ENSPPYG00000001675)	NR0B2 (ENSPPYG00000001674)	NUDC (ENSPPYG00000001673)	KDF1 (ENSPPYG00000001672)	TRNP1 (ENSPPYG00000036663)	TENT5B (ENSPPYG00000038825) #19	ENSPPYG00000033121	SLC9A1 (ENSPPYG00000001669) #21	ENSPPYG00000017919	WDTC1 (ENSPPYG00000001668) #22	TMEM222 (ENSPPYG00000001667) #23	SYTL1 (ENSPPYG00000001666) #24	MAP3K6 (ENSPPYG00000001665) #25	FCN3 (ENSPPYG00000001664)	CD164L2 (ENSPPYG00000001663) #26	GPR3 (ENSPPYG00000001662) #27	WASF2 (ENSPPYG00000001661) #28	FGR (ENSPPYG00000001659) #30	IFI6 (ENSPPYG00000001658)	FAM76A (ENSPPYG00000001656) #32	STX12 (ENSPPYG00000001655) #33	ENSPPYG00000001653	PPP1R8 (ENSPPYG00000001654) #34	THEMIS2 (ENSPPYG00000001652)	RPA2 (ENSPPYG00000001651)
Gibbon	MODERN SPECIES	16	DHDDS (ENSNLEG00000009298)	HMGN2 (ENSNLEG00000030914)	ENSNLEG00000032309	RPS6KA1 (ENSNLEG00000009314)	ENSNLEG00000009343	PIGV (ENSNLEG00000009372)	ENSNLEG00000033920	SFN (ENSNLEG00000018582)	GPN2 (ENSNLEG00000009383)	GPATCH3 (ENSNLEG00000009387)	NR0B2 (ENSNLEG00000009403)	NUDC (ENSNLEG00000009404)	TENT5B (ENSNLEG00000009432) #19	SLC9A1 (ENSNLEG00000009434) #21	ENSNLEG00000035618	WDTC1 (ENSNLEG00000009495) #22	TMEM222 (ENSNLEG00000009516) #23	SYTL1 (ENSNLEG00000009521) #24	MAP3K6 (ENSNLEG00000009550) #25	FCN3 (ENSNLEG00000009613)	CD164L2 (ENSNLEG00000009625) #26	GPR3 (ENSNLEG00000028413) #27	ENSNLEG00000009635 #28	AHDC1 (ENSNLEG00000034636) #29	ENSNLEG00000009650 #30	IFI6 (ENSNLEG00000009659)	FAM76A (ENSNLEG00000027579) #32	ENSNLEG00000029142	STX12 (ENSNLEG00000030651) #33	PPP1R8 (ENSNLEG00000009676) #34	ENSNLEG00000009695
Cercopithecidae	ANCESTRAL SPECIES	2	ENSGT00950000182802.B.a.a.a.a.h.b.a.a.a	ENSGT00940000159314	ENSGT00940000155194	ENSGT00390000013174	ENSGT00940000156585	ENSGT01090000260040.b.b.b.a	ENSGT00950000183172.B	ENSGT00390000004191	ENSGT00390000015719.c	ENSGT00940000155361	ENSGT00390000016565	ENSGT00390000001376.bb.a.a	ENSGT00390000017418	ENSGT00940000160747 #19	ENSGT00940000156338 #21	ENSGT00950000182900.B #22	ENSGT00390000007371 #23	ENSGT00940000160932 #24	ENSGT00940000159398 #25	ENSGT00940000163188	ENSGT00530000063929.a.b #26	ENSGT01060000248564.b.a.a.a #27	ENSGT00950000182962.b.a #28	ENSGT00390000018883 #29	ENSGT00940000157554 #30	ENSGT00940000163178	ENSGT00940000160073 #32	ENSGT01000000214440.A.a.b.a #33	ENSGT00940000156115 #34	ENSGT00530000063770.c.a	ENSGT00390000010045.g.b
Rhinopithecus	ANCESTRAL SPECIES	82	ENSGT00940000160512	ENSGT00390000002615.o.b	ENSGT00390000005254.i.b	ENSGT00940000156585	ENSGT01090000260040.b.b.b.a	ENSGT00950000183172.B	ENSGT00390000004191	ENSGT00390000015719.c	ENSGT00940000155361.d	ENSGT00390000016565	ENSGT00390000001376.bb.a.a	ENSGT00390000017418	ENSGT00940000160747 #19	ENSGT00940000155479	ENSGT00940000156338 #21	ENSGT00950000182900.B #22	ENSGT00390000007371 #23	ENSGT00940000160932 #24	ENSGT00940000159398 #25	ENSGT00940000163188	ENSGT00530000063929.a.b #26	ENSGT01060000248564.b.a.a.a #27	ENSGT00950000182962.b.a #28	ENSGT00390000018883 #29	ENSGT00940000157554 #30	ENSGT00940000163178	ENSGT00940000160073 #32	ENSGT01000000214440.A.a.b.a #33	ENSGT00940000156115 #34	ENSGT00530000063770.c.a	ENSGT00390000010045.g.b
Golden snub-nosed monkey	MODERN SPECIES	2213	ENSRROG00000043752	ARID1A (ENSRROG00000036508)	PIGV (ENSRROG00000045107)	ENSRROG00000032291	ZDHHC18 (ENSRROG00000041022)	SFN (ENSRROG00000003412)	GPN2 (ENSRROG00000021722)	GPATCH3 (ENSRROG00000038382)	NR0B2 (ENSRROG00000042749)	NUDC (ENSRROG00000037321)	KDF1 (ENSRROG00000042590)	ENSRROG00000045205	TENT5B (ENSRROG00000045423) #19	ENSRROG00000030078	SLC9A1 (ENSRROG00000035382) #21	WDTC1 (ENSRROG00000039571) #22	TMEM222 (ENSRROG00000032428) #23	SYTL1 (ENSRROG00000037744) #24	MAP3K6 (ENSRROG00000031761) #25	FCN3 (ENSRROG00000033384)	CD164L2 (ENSRROG00000033312) #26	GPR3 (ENSRROG00000016304) #27	WASF2 (ENSRROG00000012791) #28	FGR (ENSRROG00000040142) #30	IFI6 (ENSRROG00000027931)	FAM76A (ENSRROG00000033795) #32	STX12 (ENSRROG00000031145) #33	PPP1R8 (ENSRROG00000041525) #34	THEMIS2 (ENSRROG00000024691)	RPA2 (ENSRROG00000040865)	SMPDL3B (ENSRROG00000035411)
Black snub-nosed monkey	MODERN SPECIES	1846	ARID1A (ENSRBIG00000036777)	PIGV (ENSRBIG00000012346)	ENSRBIG00000029686	ZDHHC18 (ENSRBIG00000042271)	SFN (ENSRBIG00000014515)	GPN2 (ENSRBIG00000036062)	GPATCH3 (ENSRBIG00000005853)	NR0B2 (ENSRBIG00000037548)	NUDC (ENSRBIG00000018562)	KDF1 (ENSRBIG00000027752)	ENSRBIG00000014734	TRNP1 (ENSRBIG00000032398)	TENT5B (ENSRBIG00000033865) #19	ENSRBIG00000014897	SLC9A1 (ENSRBIG00000022222) #21	WDTC1 (ENSRBIG00000040615) #22	TMEM222 (ENSRBIG00000043541) #23	SYTL1 (ENSRBIG00000029326) #24	ENSRBIG00000037465 #25	FCN3 (ENSRBIG00000042599)	CD164L2 (ENSRBIG00000034769) #26	GPR3 (ENSRBIG00000014455) #27	WASF2 (ENSRBIG00000042169) #28	AHDC1 (ENSRBIG00000014826) #29	FGR (ENSRBIG00000039817) #30	IFI6 (ENSRBIG00000020079)	FAM76A (ENSRBIG00000031849) #32	STX12 (ENSRBIG00000036484) #33	PPP1R8 (ENSRBIG00000012191) #34	THEMIS2 (ENSRBIG00000012387)	RPA2 (ENSRBIG00000036230)
Cercopithecinae	ANCESTRAL SPECIES		ENSGT00950000182802.B.a.a.a.a.h.b.a.a.a	ENSGT00940000159314	ENSGT00940000155194	ENSGT00390000013174	ENSGT00940000156585	ENSGT01090000260040.b.b.b.a	ENSGT00950000183172.B	ENSGT00390000004191	ENSGT00390000015719.c	ENSGT00940000155361	ENSGT00390000016565	ENSGT00390000001376.bb.a.a	ENSGT00390000017418	ENSGT00940000160747 #19	ENSGT00940000156338 #21	ENSGT00950000182900.B #22	ENSGT00390000007371 #23	ENSGT00940000160932 #24	ENSGT00940000159398 #25	ENSGT00940000163188	ENSGT00530000063929.a.b #26	ENSGT01060000248564.b.a.a.a #27	ENSGT00950000182962.b.a #28	ENSGT00390000018883 #29	ENSGT00940000157554 #30	ENSGT00940000163178	ENSGT00940000160073 #32	ENSGT01000000214440.A.a.b.a #33	ENSGT00940000156115 #34	ENSGT00530000063770.c.a	ENSGT00390000010045.g.b
Vervet Monkey	MODERN SPECIES	12	DHDDS (ENSCSAG00000000976)	ENSCSAG00000000977	RPS6KA1 (ENSCSAG00000000978)	ARID1A (ENSCSAG00000000979)	PIGV (ENSCSAG00000000980)	ZDHHC18 (ENSCSAG00000000981)	SFN (ENSCSAG00000000649)	GPN2 (ENSCSAG00000000982)	GPATCH3 (ENSCSAG00000000983)	NR0B2 (ENSCSAG00000000984)	NUDC (ENSCSAG00000000985)	KDF1 (ENSCSAG00000000986)	TRNP1 (ENSCSAG00000000650)	TENT5B (ENSCSAG00000000987) #19	SLC9A1 (ENSCSAG00000000988) #21	WDTC1 (ENSCSAG00000000989) #22	TMEM222 (ENSCSAG00000000990) #23	SYTL1 (ENSCSAG00000000991) #24	MAP3K6 (ENSCSAG00000000992) #25	FCN3 (ENSCSAG00000000993)	CD164L2 (ENSCSAG00000000994) #26	GPR3 (ENSCSAG00000000651) #27	WASF2 (ENSCSAG00000000995) #28	AHDC1 (ENSCSAG00000000652) #29	FGR (ENSCSAG00000000996) #30	IFI6 (ENSCSAG00000000997)	FAM76A (ENSCSAG00000000999) #32	STX12 (ENSCSAG00000001000) #33	PPP1R8 (ENSCSAG00000001002) #34	THEMIS2 (ENSCSAG00000001003)	RPA2 (ENSCSAG00000001004)
Cercopithecinae_a	ANCESTRAL SPECIES		ENSGT00950000182802.B.a.a.a.a.h.b.a.a.a	ENSGT00940000159314	ENSGT00940000155194	ENSGT00390000013174	ENSGT00940000156585	ENSGT01090000260040.b.b.b.a	ENSGT00950000183172.B	ENSGT00390000004191	ENSGT00390000015719.c	ENSGT00940000155361	ENSGT00390000016565	ENSGT00390000001376.bb.a.a	ENSGT00390000017418	ENSGT00940000160747 #19	ENSGT00940000156338 #21	ENSGT00950000182900.B #22	ENSGT00390000007371 #23	ENSGT00940000160932 #24	ENSGT00940000159398 #25	ENSGT00940000163188	ENSGT00530000063929.a.b #26	ENSGT01060000248564.b.a.a.a #27	ENSGT00950000182962.b.a #28	ENSGT00390000018883 #29	ENSGT00940000157554 #30	ENSGT00940000163178	ENSGT00940000160073 #32	ENSGT01000000214440.A.a.b.a #33	ENSGT00940000156115 #34	ENSGT00530000063770.c.a	ENSGT00390000010045.g.b
Macaca	ANCESTRAL SPECIES		ENSGT00390000007879	ENSGT00950000182802.B.a.a.a.a.h.b.a.a.a	ENSGT00940000159314	ENSGT00940000155194	ENSGT00390000013174	ENSGT00940000156585	ENSGT01090000260040.b.b.b.a	ENSGT00950000183172.B	ENSGT00390000004191	ENSGT00390000015719.c	ENSGT00940000155361	ENSGT00390000016565	ENSGT00390000017418	ENSGT00940000160747 #19	ENSGT00940000156338 #21	ENSGT00950000182900.B #22	ENSGT00390000007371 #23	ENSGT00940000160932 #24	ENSGT00940000159398 #25	ENSGT00940000163188	ENSGT00530000063929.a.b #26	ENSGT01060000248564.b.a.a.a #27	ENSGT00950000182962.b.a #28	ENSGT00390000018883 #29	ENSGT00940000157554 #30	ENSGT00940000163178	ENSGT00940000160073 #32	ENSGT01000000214440.A.a.b.a #33	ENSGT00940000156115 #34	ENSGT00530000063770.c.a	ENSGT00390000010045.g.b
Macaca_a	ANCESTRAL SPECIES		ENSGT00940000169163	ENSGT00950000182802.B.a.a.a.a.h.b.a.a.a	ENSGT00940000159314	ENSGT00940000155194	ENSGT00390000013174	ENSGT00940000156585	ENSGT01090000260040.b.b.b.a	ENSGT00950000183172.B	ENSGT00390000004191	ENSGT00390000015719.c	ENSGT00940000155361	ENSGT00390000016565	ENSGT00390000017418	ENSGT00940000160747 #19	ENSGT00940000156338 #21	ENSGT00950000182900.B #22	ENSGT00390000007371 #23	ENSGT00940000160932 #24	ENSGT00940000159398 #25	ENSGT00940000163188	ENSGT00530000063929.a.b #26	ENSGT01060000248564.b.a.a.a #27	ENSGT00950000182962.b.a #28	ENSGT00390000018883 #29	ENSGT00940000157554 #30	ENSGT00940000163178	ENSGT00940000160073 #32	ENSGT01000000214440.A.a.b.a #33	ENSGT00940000156115 #34	ENSGT00530000063770.c.a	ENSGT00390000010045.g.b
Crab-eating macaque	MODERN SPECIES		DHDDS (ENSMFAG00000033901)	ENSMFAG00000040651	HMGN2 (ENSMFAG00000065507)	RPS6KA1 (ENSMFAG00000044982)	ARID1A (ENSMFAG00000032392)	PIGV (ENSMFAG00000003929)	SFN (ENSMFAG00000017885)	GPN2 (ENSMFAG00000036999)	GPATCH3 (ENSMFAG00000030918)	NR0B2 (ENSMFAG00000042880)	NUDC (ENSMFAG00000035581)	KDF1 (ENSMFAG00000042338)	TENT5B (ENSMFAG00000003756) #19	ENSMFAG00000037876 #21	ENSMFAG00000047298	WDTC1 (ENSMFAG00000040733) #22	TMEM222 (ENSMFAG00000003393) #23	SYTL1 (ENSMFAG00000002518) #24	MAP3K6 (ENSMFAG00000039505) #25	FCN3 (ENSMFAG00000000683)	CD164L2 (ENSMFAG00000032742) #26	GPR3 (ENSMFAG00000026566) #27	WASF2 (ENSMFAG00000001141) #28	AHDC1 (ENSMFAG00000004617) #29	FGR (ENSMFAG00000037860) #30	ENSMFAG00000049622	IFI6 (ENSMFAG00000034666)	FAM76A (ENSMFAG00000051312) #32	PPP1R8 (ENSMFAG00000001557) #34	THEMIS2 (ENSMFAG00000030730)	RPA2 (ENSMFAG00000022522)
Rhesus	MODERN SPECIES		ENSMMUG00000051392	RPS6KA1 (ENSMMUG00000022111)	ARID1A (ENSMMUG00000012697)	PIGV (ENSMMUG00000012700)	ZDHHC18 (ENSMMUG00000058432)	SFN (ENSMMUG00000013855)	GPN2 (ENSMMUG00000018721)	GPATCH3 (ENSMMUG00000018723)	NR0B2 (ENSMMUG00000010291)	KDF1 (ENSMMUG00000002555)	NUDC (ENSMMUG00000010290)	TRNP1 (ENSMMUG00000021031)	TENT5B (ENSMMUG00000015115) #19	SLC9A1 (ENSMMUG00000016893) #21	ENSMMUG00000049904	WDTC1 (ENSMMUG00000004762) #22	TMEM222 (ENSMMUG00000004767) #23	SYTL1 (ENSMMUG00000004768) #24	MAP3K6 (ENSMMUG00000018318) #25	FCN3 (ENSMMUG00000018322)	GPR3 (ENSMMUG00000018325) #27	WASF2 (ENSMMUG00000018221) #28	AHDC1 (ENSMMUG00000009868) #29	FGR (ENSMMUG00000014434) #30	IFI6 (ENSMMUG00000011454)	FAM76A (ENSMMUG00000012243) #32	ENSMMUG00000057915	STX12 (ENSMMUG00000012252) #34	ENSMMUG00000056206	THEMIS2 (ENSMMUG00000018170)	RPA2 (ENSMMUG00000018172)
Pig-tailed macaque	MODERN SPECIES	217	ENSMNEG00000033223	ENSMNEG00000032926	RPS6KA1 (ENSMNEG00000043267)	ARID1A (ENSMNEG00000039389)	PIGV (ENSMNEG00000042165)	ZDHHC18 (ENSMNEG00000042738)	SFN (ENSMNEG00000027432)	GPN2 (ENSMNEG00000041201)	GPATCH3 (ENSMNEG00000033889)	NR0B2 (ENSMNEG00000040399)	NUDC (ENSMNEG00000030640)	KDF1 (ENSMNEG00000042498)	TRNP1 (ENSMNEG00000003839)	TENT5B (ENSMNEG00000042604) #19	SLC9A1 (ENSMNEG00000010902) #21	WDTC1 (ENSMNEG00000041566) #22	TMEM222 (ENSMNEG00000038995) #23	SYTL1 (ENSMNEG00000038366) #24	MAP3K6 (ENSMNEG00000028644) #25	FCN3 (ENSMNEG00000038862)	CD164L2 (ENSMNEG00000040766) #26	GPR3 (ENSMNEG00000019217) #27	WASF2 (ENSMNEG00000033479) #28	FGR (ENSMNEG00000043664) #30	IFI6 (ENSMNEG00000029593)	FAM76A (ENSMNEG00000027606) #32	ENSMNEG00000041438	STX12 (ENSMNEG00000005186) #33	PPP1R8 (ENSMNEG00000030784) #34	THEMIS2 (ENSMNEG00000036095)	RPA2 (ENSMNEG00000032153)
Cercopithecinae_b	ANCESTRAL SPECIES	1	ENSGT00950000182802.B.a.a.a.a.h.b.a.a.a	ENSGT00940000159314	ENSGT00940000155194	ENSGT00390000013174	ENSGT00940000156585	ENSGT01090000260040.b.b.b.a	ENSGT00950000183172.B	ENSGT00390000004191	ENSGT00390000015719.c	ENSGT00940000155361	ENSGT00390000016565	ENSGT00390000001376.bb.a.a	ENSGT00390000017418	ENSGT00940000160747 #19	ENSGT00940000156338 #21	ENSGT00950000182900.B #22	ENSGT00390000007371 #23	ENSGT00940000160932 #24	ENSGT00940000159398 #25	ENSGT00940000163188	ENSGT00530000063929.a.b #26	ENSGT01060000248564.b.a.a.a #27	ENSGT00950000182962.b.a #28	ENSGT00390000018883 #29	ENSGT00940000157554 #30	ENSGT00940000163178	ENSGT00940000160073 #32	ENSGT01000000214440.A.a.b.a #33	ENSGT00940000156115 #34	ENSGT00530000063770.c.a	ENSGT00390000010045.g.b
Olive baboon	MODERN SPECIES		RPS6KA1 (ENSPANG00000020222)	ARID1A (ENSPANG00000020845)	PIGV (ENSPANG00000002392)	ZDHHC18 (ENSPANG00000011011)	ENSPANG00000037057	GPN2 (ENSPANG00000005722)	GPATCH3 (ENSPANG00000007984)	NR0B2 (ENSPANG00000002391)	NUDC (ENSPANG00000019007)	KDF1 (ENSPANG00000023562)	ENSPANG00000005605	TRNP1 (ENSPANG00000018909)	TENT5B (ENSPANG00000007821) #19	ENSPANG00000042373	ENSPANG00000034989	WDTC1 (ENSPANG00000008666) #22	TMEM222 (ENSPANG00000018881) #23	SYTL1 (ENSPANG00000005720) #24	MAP3K6 (ENSPANG00000006133) #25	FCN3 (ENSPANG00000012868)	CD164L2 (ENSPANG00000017456) #26	GPR3 (ENSPANG00000001840) #27	WASF2 (ENSPANG00000013871) #28	AHDC1 (ENSPANG00000006132) #29	FGR (ENSPANG00000016682) #30	IFI6 (ENSPANG00000000246)	FAM76A (ENSPANG00000000247) #32	STX12 (ENSPANG00000007130) #33	PPP1R8 (ENSPANG00000043070) #34	THEMIS2 (ENSPANG00000005205)	RPA2 (ENSPANG00000017991)
Cercopithecinae_d	ANCESTRAL SPECIES	1	ENSGT00390000007879	ENSGT00950000182802.B.a.a.a.a.h.b.a.a.a	ENSGT00940000159314	ENSGT00940000155194	ENSGT00390000013174	ENSGT00940000156585	ENSGT01090000260040.b.b.b.a	ENSGT00950000183172.B	ENSGT00390000004191	ENSGT00390000015719.c	ENSGT00940000155361	ENSGT00390000016565	ENSGT00390000017418	ENSGT00940000160747 #19	ENSGT00940000156338 #21	ENSGT00950000182900.B #22	ENSGT00390000007371 #23	ENSGT00940000160932 #24	ENSGT00940000159398 #25	ENSGT00940000163188	ENSGT00530000063929.a.b #26	ENSGT01060000248564.b.a.a.a #27	ENSGT00950000182962.b.a #28	ENSGT00390000018883 #29	ENSGT00940000157554 #30	ENSGT00940000163178	ENSGT00940000160073 #32	ENSGT01000000214440.A.a.b.a #33	ENSGT00940000156115 #34	ENSGT00530000063770.c.a	ENSGT00390000010045.g.b
Drill	MODERN SPECIES	832	ENSMLEG00000038780	RPS6KA1 (ENSMLEG00000043206)	ARID1A (ENSMLEG00000022830)	PIGV (ENSMLEG00000034758)	ZDHHC18 (ENSMLEG00000042906)	ENSMLEG00000003136	ENSMLEG00000006437	GPN2 (ENSMLEG00000025975)	GPATCH3 (ENSMLEG00000033364)	NR0B2 (ENSMLEG00000030851)	NUDC (ENSMLEG00000036923)	KDF1 (ENSMLEG00000041584)	ENSMLEG00000026434	TENT5B (ENSMLEG00000042465) #19	SLC9A1 (ENSMLEG00000014293) #21	WDTC1 (ENSMLEG00000028076) #22	TMEM222 (ENSMLEG00000031793) #23	SYTL1 (ENSMLEG00000044240) #24	MAP3K6 (ENSMLEG00000041031) #25	FCN3 (ENSMLEG00000017979)	CD164L2 (ENSMLEG00000038397) #26	GPR3 (ENSMLEG00000027688) #27	WASF2 (ENSMLEG00000041634) #28	AHDC1 (ENSMLEG00000027938) #29	FGR (ENSMLEG00000032617) #30	IFI6 (ENSMLEG00000037855)	FAM76A (ENSMLEG00000033923) #32	STX12 (ENSMLEG00000038548) #33	PPP1R8 (ENSMLEG00000041495) #34	THEMIS2 (ENSMLEG00000040682)	RPA2 (ENSMLEG00000031567)
Sooty mangabey	MODERN SPECIES	227	DHDDS (ENSCATG00000021205)	HMGN2 (ENSCATG00000044642)	RPS6KA1 (ENSCATG00000032529)	ARID1A (ENSCATG00000035561)	PIGV (ENSCATG00000016281)	ZDHHC18 (ENSCATG00000044376)	SFN (ENSCATG00000006825)	GPN2 (ENSCATG00000033688)	GPATCH3 (ENSCATG00000033598)	NR0B2 (ENSCATG00000044469)	KDF1 (ENSCATG00000015571)	TRNP1 (ENSCATG00000004345)	TENT5B (ENSCATG00000017109) #19	SLC9A1 (ENSCATG00000033651) #21	ENSCATG00000033551	WDTC1 (ENSCATG00000044454) #22	TMEM222 (ENSCATG00000044475) #23	SYTL1 (ENSCATG00000044339) #24	MAP3K6 (ENSCATG00000025890) #25	FCN3 (ENSCATG00000020495)	CD164L2 (ENSCATG00000044159) #26	GPR3 (ENSCATG00000006977) #27	WASF2 (ENSCATG00000027046) #28	AHDC1 (ENSCATG00000004004) #29	FGR (ENSCATG00000044439) #30	IFI6 (ENSCATG00000016831)	ENSCATG00000033546	FAM76A (ENSCATG00000033886) #32	STX12 (ENSCATG00000032583) #33	PPP1R8 (ENSCATG00000032635) #34	THEMIS2 (ENSCATG00000031969)
Laurasiatheria	ANCESTRAL SPECIES		ENSGT00950000182802.B.a.b	ENSGT00940000159314	ENSGT00940000155194	ENSGT00390000013174	ENSGT00940000156585	ENSGT01090000260040.b.b.b.a	ENSGT00950000183172.B	ENSGT00390000004191	ENSGT00390000015719.c	ENSGT00940000155361	ENSGT00390000016565	ENSGT00900000143263	ENSGT00390000017418	ENSGT00940000160747 #19	ENSGT00940000156338 #21	ENSGT00950000182900.B #22	ENSGT00390000007371 #23	ENSGT00940000160932 #24	ENSGT00940000159398 #25	ENSGT00940000163188	ENSGT00530000063929.a.b #26	ENSGT01060000248564.b.a.a.a #27	ENSGT00950000182962.b.a #28	ENSGT00390000018883 #29	ENSGT00940000157554 #30	ENSGT00940000163178	ENSGT00940000160073 #32	ENSGT01000000214440.A.a.b.a #33	ENSGT00940000156115 #34	ENSGT00530000063770.c.a	ENSGT00390000010045
Eulipotyphla	ANCESTRAL SPECIES	1535																ENSGT00950000182900.B #22	ENSGT00390000007371 #23
Hedgehog	MODERN SPECIES	3961																WDTC1 (ENSEEUG00000005340) #22
Common shrew	MODERN SPECIES	3004																WDTC1 (ENSSARG00000011638) #22	TMEM222 (ENSSARG00000011684) #23
Laurasiatheria_a	ANCESTRAL SPECIES		ENSGT00950000182802.B.a.b	ENSGT00940000159314	ENSGT00940000155194	ENSGT00390000013174	ENSGT00940000156585	ENSGT01090000260040.b.b.b.a	ENSGT00950000183172.B	ENSGT00390000004191	ENSGT00390000015719.c	ENSGT00940000155361	ENSGT00390000016565	ENSGT00900000143263	ENSGT00390000017418	ENSGT00940000160747 #19	ENSGT00940000156338 #21	ENSGT00950000182900.B #22	ENSGT00390000007371 #23	ENSGT00940000160932 #24	ENSGT00940000159398 #25	ENSGT00940000163188	ENSGT00530000063929.a.b #26	ENSGT01060000248564.b.a.a.a #27	ENSGT00950000182962.b.a #28	ENSGT00390000018883 #29	ENSGT00940000157554 #30	ENSGT00940000163178	ENSGT00940000160073 #32	ENSGT01000000214440.A.a.b.a #33	ENSGT00940000156115 #34	ENSGT00530000063770.c.a	ENSGT00390000010045
Laurasiatheria_b	ANCESTRAL SPECIES		ENSGT00950000182802.B.a.b	ENSGT00940000159314	ENSGT00940000155194	ENSGT00390000013174	ENSGT00940000156585	ENSGT01090000260040.b.b.b.a	ENSGT00950000183172.B	ENSGT00390000004191	ENSGT00390000015719.c	ENSGT00940000155361	ENSGT00390000016565	ENSGT00900000143263	ENSGT00390000017418	ENSGT00940000160747 #19	ENSGT00940000156338 #21	ENSGT00950000182900.B #22	ENSGT00390000007371 #23	ENSGT00940000160932 #24	ENSGT00940000159398 #25	ENSGT00940000163188	ENSGT00530000063929.a.b #26	ENSGT01060000248564.b.a.a.a #27	ENSGT00950000182962.b.a #28	ENSGT00390000018883 #29	ENSGT00940000157554 #30	ENSGT00940000163178	ENSGT00940000160073 #32	ENSGT01000000214440.A.a.b.a #33	ENSGT00940000156115 #34	ENSGT00530000063770.c.a	ENSGT00390000010045
Laurasiatheria_c	ANCESTRAL SPECIES		ENSGT00950000182802.B.a.b	ENSGT00940000159314	ENSGT00940000155194	ENSGT00390000013174	ENSGT00940000156585	ENSGT01090000260040.b.b.b.a	ENSGT00950000183172.B	ENSGT00390000004191	ENSGT00390000015719.c	ENSGT00940000155361	ENSGT00390000016565	ENSGT00900000143263	ENSGT00390000017418	ENSGT00940000160747 #19	ENSGT00940000156338 #21	ENSGT00950000182900.B #22	ENSGT00390000007371 #23	ENSGT00940000160932 #24	ENSGT00940000159398 #25	ENSGT00940000163188	ENSGT00530000063929.a.b #26	ENSGT01060000248564.b.a.a.a #27	ENSGT00950000182962.b.a #28	ENSGT00390000018883 #29	ENSGT00940000157554 #30	ENSGT00940000163178	ENSGT00940000160073 #32	ENSGT01000000214440.A.a.b.a #33	ENSGT00940000156115 #34	ENSGT00530000063770.c.a	ENSGT00390000010045
Equus	ANCESTRAL SPECIES	2	ENSGT00390000007879	ENSGT00950000182802.B.a.b	ENSGT00940000159314	ENSGT00940000155194	ENSGT00390000013174	ENSGT00940000156585	ENSGT01090000260040.b.b.b.a	ENSGT00950000183172.B	ENSGT00390000004191	ENSGT00390000015719.c	ENSGT00940000155361	ENSGT00390000016565	ENSGT00390000017418	ENSGT00940000160747 #19	ENSGT00940000156338 #21	ENSGT00950000182900.B #22	ENSGT00390000007371 #23	ENSGT00940000160932 #24	ENSGT00940000159398 #25	ENSGT00940000163188	ENSGT00530000063929.a.b #26	ENSGT01060000248564.b.a.a.a #27	ENSGT00950000182962.b.a #28	ENSGT00390000018883 #29	ENSGT00940000157554 #30	ENSGT00940000163178	ENSGT00940000160073 #32	ENSGT01000000214440.A.a.b.a #33	ENSGT00940000156115 #34	ENSGT00530000063770.c.a	ENSGT00390000010045
Donkey	MODERN SPECIES	25	DHDDS (ENSEASG00005003944)	ENSEASG00005037497	RPS6KA1 (ENSEASG00005003928)	ARID1A (ENSEASG00005008616)	PIGV (ENSEASG00005008625)	ZDHHC18 (ENSEASG00005038436)	SFN (ENSEASG00005008630)	GPN2 (ENSEASG00005033906)	GPATCH3 (ENSEASG00005008636)	NR0B2 (ENSEASG00005008640)	NUDC (ENSEASG00005008644)	KDF1 (ENSEASG00005008678)	TRNP1 (ENSEASG00005008681)	TENT5B (ENSEASG00005030650) #19	SLC9A1 (ENSEASG00005008683) #21	WDTC1 (ENSEASG00005008688) #22	TMEM222 (ENSEASG00005027327) #23	SYTL1 (ENSEASG00005008710) #24	MAP3K6 (ENSEASG00005008765) #25	FCN3 (ENSEASG00005032502)	CD164L2 (ENSEASG00005009485) #26	GPR3 (ENSEASG00005031706) #27	WASF2 (ENSEASG00005009488) #28	AHDC1 (ENSEASG00005009489) #29	FGR (ENSEASG00005009494) #30	FAM76A (ENSEASG00005009497) #32	IFI6 (ENSEASG00005025976)	STX12 (ENSEASG00005009498) #33	PPP1R8 (ENSEASG00005009499) #34	THEMIS2 (ENSEASG00005009503)	ENSEASG00005009504
Horse	MODERN SPECIES	11	LIN28A (ENSECAG00000020267)	ENSECAG00000037332	DHDDS (ENSECAG00000016220)	RPS6KA1 (ENSECAG00000016238)	ARID1A (ENSECAG00000017991)	PIGV (ENSECAG00000017119)	ENSECAG00000045174	GPN2 (ENSECAG00000041580)	GPATCH3 (ENSECAG00000007653)	NR0B2 (ENSECAG00000050372)	NUDC (ENSECAG00000021311)	KDF1 (ENSECAG00000020561)	TRNP1 (ENSECAG00000049020)	TENT5B (ENSECAG00000018835) #19	SLC9A1 (ENSECAG00000011296) #21	WDTC1 (ENSECAG00000024411) #22	SYTL1 (ENSECAG00000020672) #24	MAP3K6 (ENSECAG00000015410) #25	FCN3 (ENSECAG00000014857)	CD164L2 (ENSECAG00000014444) #26	GPR3 (ENSECAG00000005510) #27	WASF2 (ENSECAG00000010268) #28	AHDC1 (ENSECAG00000010246) #29	FGR (ENSECAG00000007837) #30	STX12 (ENSECAG00000012718) #33	PPP1R8 (ENSECAG00000009693) #34	RPA2 (ENSECAG00000005616)	FAM76A (ENSECAG00000019350) #32	THEMIS2 (ENSECAG00000008596)	SMPDL3B (ENSECAG00000000634)	XKR8 (ENSECAG00000043252)
Chiroptera	ANCESTRAL SPECIES		ENSGT00950000182802.B.a.b	ENSGT00940000159314	ENSGT00940000155194	ENSGT00390000013174	ENSGT00940000156585	ENSGT01090000260040.b.b.b.a	ENSGT00950000183172.B	ENSGT00390000004191	ENSGT00390000015719.c	ENSGT00940000155361	ENSGT00390000016565	ENSGT00900000143263	ENSGT00390000017418	ENSGT00940000160747 #19	ENSGT00940000156338 #21	ENSGT00950000182900.B #22	ENSGT00390000007371 #23	ENSGT00940000160932 #24	ENSGT00940000159398 #25	ENSGT00940000163188	ENSGT00530000063929.a.b #26	ENSGT01060000248564.b.a.a.a #27	ENSGT00950000182962.b.a #28	ENSGT00390000018883 #29	ENSGT00940000157554 #30	ENSGT00940000163178	ENSGT00940000160073 #32	ENSGT01000000214440.A.a.b.a #33	ENSGT00940000156115 #34	ENSGT00530000063770.c.a	ENSGT00390000010045
Megabat	MODERN SPECIES	1021																WDTC1 (ENSPVAG00000008400) #22
Microchiroptera	ANCESTRAL SPECIES	1	ENSGT00950000182802.B.a.b	ENSGT00940000159314	ENSGT00940000155194	ENSGT00390000013174	ENSGT00940000156585	ENSGT01090000260040.b.b.b.a	ENSGT00950000183172.B	ENSGT00390000004191	ENSGT00390000015719.c	ENSGT00940000155361	ENSGT00390000016565	ENSGT00900000143263	ENSGT00390000017418	ENSGT00940000160747 #19	ENSGT00940000156338 #21	ENSGT00950000182900.B #22	ENSGT00390000007371 #23	ENSGT00940000160932 #24	ENSGT00940000159398 #25	ENSGT00940000163188	ENSGT00530000063929.a.b #26	ENSGT01060000248564.b.a.a.a #27	ENSGT00950000182962.b.a #28	ENSGT00390000018883 #29	ENSGT00940000157554 #30	ENSGT00940000163178	ENSGT00940000160073 #32	ENSGT01000000214440.A.a.b.a #33	ENSGT00940000156115 #34	ENSGT00530000063770.c.a	ENSGT00390000010045
Microbat	MODERN SPECIES	1134		RPS6KA1 (ENSMLUG00000002474)	ENSMLUG00000026071	ARID1A (ENSMLUG00000002492)	PIGV (ENSMLUG00000002508)	ZDHHC18 (ENSMLUG00000010194)	ENSMLUG00000010207	GPN2 (ENSMLUG00000004651)	GPATCH3 (ENSMLUG00000023528)	NR0B2 (ENSMLUG00000004658)	NUDC (ENSMLUG00000004662)	KDF1 (ENSMLUG00000004669)	TRNP1 (ENSMLUG00000004673)	TENT5B (ENSMLUG00000004676) #19	SLC9A1 (ENSMLUG00000004681) #21	WDTC1 (ENSMLUG00000004136) #22	TMEM222 (ENSMLUG00000004145) #23	SYTL1 (ENSMLUG00000001802) #24	MAP3K6 (ENSMLUG00000001811) #25	FCN3 (ENSMLUG00000001825)	CD164L2 (ENSMLUG00000024507) #26	WASF2 (ENSMLUG00000001835) #28	FGR (ENSMLUG00000014580) #30	IFI6 (ENSMLUG00000014587)	FAM76A (ENSMLUG00000000136) #32	STX12 (ENSMLUG00000000141) #33	PPP1R8 (ENSMLUG00000000144) #34	THEMIS2 (ENSMLUG00000000147)	RPA2 (ENSMLUG00000000151)	SMPDL3B (ENSMLUG00000026678)	XKR8 (ENSMLUG00000000154)
Greater horseshoe bat	MODERN SPECIES	27	ENSRFEG00010003916	RPS6KA1 (ENSRFEG00010003955)	ARID1A (ENSRFEG00010004027)	PIGV (ENSRFEG00010004125)	ZDHHC18 (ENSRFEG00010004139)	SFN (ENSRFEG00010004152)	GPN2 (ENSRFEG00010004163)	GPATCH3 (ENSRFEG00010004179)	NR0B2 (ENSRFEG00010004192)	NUDC (ENSRFEG00010004201)	KDF1 (ENSRFEG00010004215)	ENSRFEG00010004229	TRNP1 (ENSRFEG00010004240)	TENT5B (ENSRFEG00010004245) #19	SLC9A1 (ENSRFEG00010004258) #21	WDTC1 (ENSRFEG00010004284) #22	TMEM222 (ENSRFEG00010004325) #23	SYTL1 (ENSRFEG00010004356) #24	MAP3K6 (ENSRFEG00010005701) #25	FCN3 (ENSRFEG00010005924)	CD164L2 (ENSRFEG00010006017) #26	GPR3 (ENSRFEG00010006070) #27	WASF2 (ENSRFEG00010006106) #28	AHDC1 (ENSRFEG00010006151) #29	FGR (ENSRFEG00010006173) #30	IFI6 (ENSRFEG00010006222)	FAM76A (ENSRFEG00010006284) #32	STX12 (ENSRFEG00010006392) #33	PPP1R8 (ENSRFEG00010006439) #34	THEMIS2 (ENSRFEG00010006552)	RPA2 (ENSRFEG00010006599)
Carnivora	ANCESTRAL SPECIES	1	ENSGT00950000182802.B.a.b	ENSGT00940000159314	ENSGT00940000155194	ENSGT00390000013174	ENSGT00940000156585	ENSGT01090000260040.b.b.b.a	ENSGT00950000183172.B	ENSGT00390000004191	ENSGT00390000015719.c	ENSGT00940000155361	ENSGT00390000016565	ENSGT00900000143263	ENSGT00390000017418	ENSGT00940000160747 #19	ENSGT00940000156338 #21	ENSGT00950000182900.B #22	ENSGT00390000007371 #23	ENSGT00940000160932 #24	ENSGT00940000159398 #25	ENSGT00940000163188	ENSGT00530000063929.a.b #26	ENSGT01060000248564.b.a.a.a #27	ENSGT00950000182962.b.a #28	ENSGT00390000018883 #29	ENSGT00940000157554 #30	ENSGT00940000163178	ENSGT00940000160073 #32	ENSGT01000000214440.A.a.b.a #33	ENSGT00940000156115 #34	ENSGT00530000063770.c.a	ENSGT00390000010045
Felidae	ANCESTRAL SPECIES	18	ENSGT00950000182802.B.a.b	ENSGT00940000159314	ENSGT00940000155194	ENSGT00390000013174	ENSGT00940000156585	ENSGT01090000260040.b.b.b.a	ENSGT00950000183172.B	ENSGT00390000004191	ENSGT00390000015719.c	ENSGT00940000155361	ENSGT00390000016565	ENSGT00900000143263	ENSGT00390000017418	ENSGT00940000160747 #19	ENSGT00940000156338 #21	ENSGT00950000182900.B #22	ENSGT00390000007371 #23	ENSGT00940000160932 #24	ENSGT00940000159398 #25	ENSGT00940000163188	ENSGT00530000063929.a.b #26	ENSGT01060000248564.b.a.a.a #27	ENSGT00950000182962.b.a #28	ENSGT00390000003248.a.b.a.a	ENSGT00390000018883 #29	ENSGT00940000157554 #30	ENSGT00940000163178	ENSGT00390000005534.b.b.c.a	ENSGT00940000160073 #32	ENSGT01000000214440.A.a.b.a #33	ENSGT00940000156115 #34
Panthera	ANCESTRAL SPECIES	4	ENSGT00950000182802.B.a.b	ENSGT00940000159314	ENSGT00940000155194	ENSGT00390000013174	ENSGT00940000156585	ENSGT01090000260040.b.b.b.a	ENSGT00950000183172.B	ENSGT00390000004191	ENSGT00390000015719.c	ENSGT00940000155361	ENSGT00390000016565	ENSGT00900000143263	ENSGT00390000017418	ENSGT00940000160747 #19	ENSGT00940000156338 #21	ENSGT00950000182900.B #22	ENSGT00390000007371 #23	ENSGT00940000160932 #24	ENSGT00940000159398 #25	ENSGT00940000163188	ENSGT00530000063929.a.b #26	ENSGT01060000248564.b.a.a.a #27	ENSGT00950000182962.b.a #28	ENSGT00390000003248.a.b.a.a	ENSGT00390000018883 #29	ENSGT00940000157554 #30	ENSGT00940000161804.f	ENSGT00940000163178	ENSGT00390000005534.b.b.c.a	ENSGT00940000160073 #32	ENSGT01000000214440.A.a.b.a #33
Panthera_a	ANCESTRAL SPECIES	14	ENSGT00950000182802.B.a.b	ENSGT00940000159314	ENSGT00940000155194	ENSGT00390000013174	ENSGT00940000156585	ENSGT01090000260040.b.b.b.a	ENSGT00950000183172.B	ENSGT00390000004191	ENSGT00390000015719.c	ENSGT00940000155361	ENSGT00390000016565	ENSGT00900000143263	ENSGT00390000017418	ENSGT00940000160747 #19	ENSGT00940000156338 #21	ENSGT00950000182900.B #22	ENSGT00390000007371 #23	ENSGT00940000160932 #24	ENSGT00940000159398 #25	ENSGT00940000163188	ENSGT00530000063929.a.b #26	ENSGT01060000248564.b.a.a.a #27	ENSGT00950000182962.b.a #28	ENSGT00390000003248.a.b.a.a	ENSGT00390000018883 #29	ENSGT00940000157554 #30	ENSGT00940000161804.f	ENSGT00940000163178	ENSGT00390000005534.b.b.c.a	ENSGT00940000160073 #32	ENSGT01000000214440.A.a.b.a #33
leopard	MODERN SPECIES	145	ARID1A (ENSPPRG00000017329)	PIGV (ENSPPRG00000024724)	ZDHHC18 (ENSPPRG00000024493)	SFN (ENSPPRG00000021621)	ENSPPRG00000024389	ENSPPRG00000024289	GPATCH3 (ENSPPRG00000024244)	NR0B2 (ENSPPRG00000024101)	NUDC (ENSPPRG00000024046)	KDF1 (ENSPPRG00000023953)	ENSPPRG00000023811	TRNP1 (ENSPPRG00000021647)	TENT5B (ENSPPRG00000023756) #19	SLC9A1 (ENSPPRG00000023440) #21	ENSPPRG00000023306	WDTC1 (ENSPPRG00000022741) #22	TMEM222 (ENSPPRG00000000473) #23	SYTL1 (ENSPPRG00000001681) #24	MAP3K6 (ENSPPRG00000004619) #25	FCN3 (ENSPPRG00000005121)	CD164L2 (ENSPPRG00000005218) #26	GPR3 (ENSPPRG00000021926) #27	WASF2 (ENSPPRG00000005663) #28	ENSPPRG00000005758	AHDC1 (ENSPPRG00000021945) #29	FGR (ENSPPRG00000006632) #30	ENSPPRG00000007183	IFI6 (ENSPPRG00000007307)	FAM76A (ENSPPRG00000008178) #32	STX12 (ENSPPRG00000009522) #33	PPP1R8 (ENSPPRG00000010064) #34
lion	MODERN SPECIES	8	DHDDS (ENSPLOG00000010590)	ENSPLOG00000010525	RPS6KA1 (ENSPLOG00000010269)	ARID1A (ENSPLOG00000009971)	PIGV (ENSPLOG00000009881)	ZDHHC18 (ENSPLOG00000009853)	SFN (ENSPLOG00000009834)	GPN2 (ENSPLOG00000009798)	GPATCH3 (ENSPLOG00000009784)	NR0B2 (ENSPLOG00000009763)	NUDC (ENSPLOG00000009710)	KDF1 (ENSPLOG00000009687)	TRNP1 (ENSPLOG00000009668)	TENT5B (ENSPLOG00000009648) #19	SLC9A1 (ENSPLOG00000009616) #21	WDTC1 (ENSPLOG00000009580) #22	TMEM222 (ENSPLOG00000009496) #23	SYTL1 (ENSPLOG00000009458) #24	MAP3K6 (ENSPLOG00000009129) #25	FCN3 (ENSPLOG00000008994)	CD164L2 (ENSPLOG00000008921) #26	GPR3 (ENSPLOG00000008898) #27	WASF2 (ENSPLOG00000008859) #28	ENSPLOG00000008820	AHDC1 (ENSPLOG00000008801) #29	FGR (ENSPLOG00000008770) #30	IFI6 (ENSPLOG00000008736)	ENSPLOG00000008704	FAM76A (ENSPLOG00000008609) #32	STX12 (ENSPLOG00000008547) #33	PPP1R8 (ENSPLOG00000008473) #34
Tiger	MODERN SPECIES	111	DHDDS (ENSPTIG00000014974)	HMGN2 (ENSPTIG00000014958)	RPS6KA1 (ENSPTIG00000014844)	ARID1A (ENSPTIG00000014743)	PIGV (ENSPTIG00000014722)	ZDHHC18 (ENSPTIG00000014713)	SFN (ENSPTIG00000009275)	ENSPTIG00000014705	GPATCH3 (ENSPTIG00000014693)	NR0B2 (ENSPTIG00000014689)	NUDC (ENSPTIG00000014669)	KDF1 (ENSPTIG00000014656)	ENSPTIG00000014652	TENT5B (ENSPTIG00000014641) #19	SLC9A1 (ENSPTIG00000014613) #21	WDTC1 (ENSPTIG00000014587) #22	TMEM222 (ENSPTIG00000014570) #23	SYTL1 (ENSPTIG00000014534) #24	MAP3K6 (ENSPTIG00000014433) #25	FCN3 (ENSPTIG00000014389)	CD164L2 (ENSPTIG00000014373) #26	GPR3 (ENSPTIG00000009268) #27	WASF2 (ENSPTIG00000014362) #28	AHDC1 (ENSPTIG00000014345) #29
Cat	MODERN SPECIES	239	DHDDS (ENSFCAG00000012811)	ENSFCAG00000041326	RPS6KA1 (ENSFCAG00000012813)	ARID1A (ENSFCAG00000012814)	PIGV (ENSFCAG00000012815)	ZDHHC18 (ENSFCAG00000012816)	SFN (ENSFCAG00000052603)	GPN2 (ENSFCAG00000012818)	GPATCH3 (ENSFCAG00000012819)	NR0B2 (ENSFCAG00000012821)	NUDC (ENSFCAG00000012822)	KDF1 (ENSFCAG00000023735)	TRNP1 (ENSFCAG00000045565)	TENT5B (ENSFCAG00000010300) #19	SLC9A1 (ENSFCAG00000010301) #21	WDTC1 (ENSFCAG00000010303) #22	TMEM222 (ENSFCAG00000027299) #23	SYTL1 (ENSFCAG00000030775) #24	MAP3K6 (ENSFCAG00000007864) #25	CD164L2 (ENSFCAG00000010305) #26	GPR3 (ENSFCAG00000010306) #27	WASF2 (ENSFCAG00000007866) #28	ENSFCAG00000033739	AHDC1 (ENSFCAG00000007867) #29	STX12 (ENSFCAG00000029657) #33	FGR (ENSFCAG00000007868) #30	IFI6 (ENSFCAG00000033862)	ENSFCAG00000021929	FAM76A (ENSFCAG00000035488) #32	PPP1R8 (ENSFCAG00000027954) #34	THEMIS2 (ENSFCAG00000003404)
Caniformia	ANCESTRAL SPECIES	2	ENSGT00950000182802.B.a.a.a.a.i.d	ENSGT00940000159314	ENSGT00940000155194	ENSGT00390000013174	ENSGT00940000156585	ENSGT01090000260040.b.b.b.a	ENSGT00950000183172.B	ENSGT00390000004191	ENSGT00390000015719.c	ENSGT00940000155361	ENSGT00390000016565	ENSGT00900000143263	ENSGT00390000017418	ENSGT00940000160747 #19	ENSGT00940000156338 #21	ENSGT00950000182900.B #22	ENSGT00390000007371 #23	ENSGT00940000160932 #24	ENSGT00940000159398 #25	ENSGT00530000063929.a.b #26	ENSGT01060000248564.b.a.a.a #27	ENSGT00950000182962.b.a #28	ENSGT00390000018883 #29	ENSGT00940000157554 #30	ENSGT00940000163178	ENSGT00940000160073 #32	ENSGT01000000214440.A.a.b.a #33	ENSGT00940000156115 #34	ENSGT00530000063770.c.a	ENSGT00390000010045	ENSGT00950000183182.a.a
Caniformia_b	ANCESTRAL SPECIES	1	ENSGT00950000182802.B.a.a.a.a.i.d	ENSGT00940000159314	ENSGT00940000155194	ENSGT00390000013174	ENSGT00940000156585	ENSGT01090000260040.b.b.b.a.b	ENSGT00950000183172.B	ENSGT00390000004191	ENSGT00390000015719.c	ENSGT00940000155361	ENSGT00390000016565	ENSGT00900000143263	ENSGT00390000017418	ENSGT00940000160747 #19	ENSGT00940000156338 #21	ENSGT00950000182900.B #22	ENSGT00390000007371 #23	ENSGT00940000160932 #24	ENSGT00940000159398 #25	ENSGT00530000063929.a.b #26	ENSGT01060000248564.b.a.a.a #27	ENSGT00950000182962.b.a #28	ENSGT00390000018883 #29	ENSGT00940000157554 #30	ENSGT00940000163178	ENSGT00940000160073 #32	ENSGT01000000214440.A.a.b.a #33	ENSGT00940000156115 #34	ENSGT00530000063770.c.a	ENSGT00390000010045	ENSGT00950000183182.a.a
Ursidae	ANCESTRAL SPECIES		ENSGT00390000007879	ENSGT00950000182802.B.b	ENSGT00940000159314	ENSGT00940000155194	ENSGT00390000013174	ENSGT00940000156585	ENSGT01090000260040.b.b.b.a.b	ENSGT00950000183172.B	ENSGT00390000004191	ENSGT00390000015719.c	ENSGT00940000155361	ENSGT00390000016565	ENSGT00900000143263	ENSGT00940000160747 #19	ENSGT00940000156338 #21	ENSGT00950000182900.B #22	ENSGT00390000007371 #23	ENSGT00940000160932 #24	ENSGT00940000159398 #25	ENSGT00530000063929.a.b #26	ENSGT01060000248564.b.a.a.a #27	ENSGT00950000182962.b.a #28	ENSGT00390000018883 #29	ENSGT00940000157554 #30	ENSGT00940000163178	ENSGT00940000160073 #32	ENSGT01000000214440.A.a.b.a #33	ENSGT00940000156115 #34	ENSGT00530000063770.c.a	ENSGT00390000010045	ENSGT00950000183182.a.a
Ursus	ANCESTRAL SPECIES		ENSGT00390000007879	ENSGT00940000169163	ENSGT00940000159314	ENSGT00940000155194	ENSGT00390000013174	ENSGT00940000156585	ENSGT01090000260040.b.b.b.a.b	ENSGT00950000183172.B	ENSGT00390000004191	ENSGT00390000015719.c	ENSGT00940000155361	ENSGT00390000016565	ENSGT00900000143263	ENSGT00940000160747 #19	ENSGT00940000156338 #21	ENSGT00950000182900.B #22	ENSGT00390000007371 #23	ENSGT00940000160932 #24	ENSGT00940000159398 #25	ENSGT00530000063929.a.b #26	ENSGT01060000248564.b.a.a.a #27	ENSGT00950000182962.b.a #28	ENSGT00940000157554 #30	ENSGT00940000163178	ENSGT00940000160073 #32	ENSGT01000000214440.A.a.b.a #33	ENSGT00940000156115 #34	ENSGT00530000063770.c.a	ENSGT00390000010045	ENSGT00950000183182.a.a	ENSGT01090000260093.b
American black bear	MODERN SPECIES	6419																WDTC1 (ENSUAMG00000002363) #22	ENSUAMG00000002354
Polar bear	MODERN SPECIES	189	DHDDS (ENSUMAG00000012572)	ENSUMAG00000012565	RPS6KA1 (ENSUMAG00000012550)	ARID1A (ENSUMAG00000011976)	PIGV (ENSUMAG00000011910)	ZDHHC18 (ENSUMAG00000011906)	SFN (ENSUMAG00000011901)	GPN2 (ENSUMAG00000011897)	GPATCH3 (ENSUMAG00000011894)	NR0B2 (ENSUMAG00000011892)	NUDC (ENSUMAG00000011889)	KDF1 (ENSUMAG00000011883)	ENSUMAG00000011881	TENT5B (ENSUMAG00000011875) #19	SLC9A1 (ENSUMAG00000011532) #21	WDTC1 (ENSUMAG00000011493) #22	TMEM222 (ENSUMAG00000011485) #23	CD164L2 (ENSUMAG00000011432) #26	GPR3 (ENSUMAG00000011428) #27	WASF2 (ENSUMAG00000011424) #28	FGR (ENSUMAG00000011271) #30	ENSUMAG00000011264	FAM76A (ENSUMAG00000011259) #32	STX12 (ENSUMAG00000011252) #33	PPP1R8 (ENSUMAG00000011243) #34	ENSUMAG00000011237	THEMIS2 (ENSUMAG00000011236)	RPA2 (ENSUMAG00000011210)	SMPDL3B (ENSUMAG00000011203)	ENSUMAG00000011201	EYA3 (ENSUMAG00000011197)
Giant Panda	MODERN SPECIES	11	ZNF683 (ENSAMEG00000010579)	LIN28A (ENSAMEG00000010582)	DHDDS (ENSAMEG00000010594)	ENSAMEG00000010618	RPS6KA1 (ENSAMEG00000010620)	ARID1A (ENSAMEG00000010750)	PIGV (ENSAMEG00000010771)	GPN2 (ENSAMEG00000030549)	GPATCH3 (ENSAMEG00000010801)	NR0B2 (ENSAMEG00000010817)	NUDC (ENSAMEG00000010820)	KDF1 (ENSAMEG00000010831)	ENSAMEG00000026569	TENT5B (ENSAMEG00000010835) #19	SLC9A1 (ENSAMEG00000010839) #21	WDTC1 (ENSAMEG00000010864) #22	TMEM222 (ENSAMEG00000010882) #23	SYTL1 (ENSAMEG00000010899) #24	MAP3K6 (ENSAMEG00000010924) #25	CD164L2 (ENSAMEG00000028803) #26	GPR3 (ENSAMEG00000020207) #27	WASF2 (ENSAMEG00000010979) #28	AHDC1 (ENSAMEG00000020208) #29	FGR (ENSAMEG00000010994) #30	ENSAMEG00000011039	FAM76A (ENSAMEG00000011050) #32	STX12 (ENSAMEG00000011073) #33	PPP1R8 (ENSAMEG00000029383) #34	THEMIS2 (ENSAMEG00000011126)	RPA2 (ENSAMEG00000011132)	SMPDL3B (ENSAMEG00000011140)
Mustelinae	ANCESTRAL SPECIES		ENSGT00950000182802.B.a.a.a.a.i.d.a.b	ENSGT00940000159314	ENSGT00940000155194	ENSGT00390000013174	ENSGT00940000156585	ENSGT01090000260040.b.b.b.a.b	ENSGT00950000183172.B	ENSGT00390000004191	ENSGT00390000015719.c	ENSGT00940000155361	ENSGT00390000016565	ENSGT00900000143263	ENSGT00390000017418	ENSGT00940000160747 #19	ENSGT00940000156338 #21	ENSGT00950000182900.B #22	ENSGT00390000007371 #23	ENSGT00940000160932 #24	ENSGT00940000159398 #25	ENSGT00530000063929.a.b #26	ENSGT01060000248564.b.a.a.a #27	ENSGT00950000182962.b.a #28	ENSGT00390000018883 #29	ENSGT00940000157554 #30	ENSGT00940000163178	ENSGT00940000160073 #32	ENSGT01000000214440.A.a.b.a #33	ENSGT00940000156115 #34	ENSGT00530000063770.c.a	ENSGT00390000010045	ENSGT00950000183182.a.a
American mink	MODERN SPECIES	9	DHDDS (ENSNVIG00000023662)	ENSNVIG00000023682	RPS6KA1 (ENSNVIG00000023687)	ARID1A (ENSNVIG00000023700)	PIGV (ENSNVIG00000023704)	SFN (ENSNVIG00000023710)	GPN2 (ENSNVIG00000023711)	GPATCH3 (ENSNVIG00000023714)	NR0B2 (ENSNVIG00000023716)	NUDC (ENSNVIG00000023719)	CA172 (ENSNVIG00000023720)	ENSNVIG00000023721	TRNP1 (ENSNVIG00000023723)	TENT5B (ENSNVIG00000023724) #19	SLC9A1 (ENSNVIG00000023725) #21	WDTC1 (ENSNVIG00000023727) #22	TMEM222 (ENSNVIG00000023737) #23	SYTL1 (ENSNVIG00000023745) #24	MAP3K6 (ENSNVIG00000023767) #25	CD164L2 (ENSNVIG00000023792) #26	GPR3 (ENSNVIG00000023793) #27	WASF2 (ENSNVIG00000023794) #28	AHDC1 (ENSNVIG00000023795) #29	FGR (ENSNVIG00000023796) #30	IFI6 (ENSNVIG00000023797)	FAM76A (ENSNVIG00000023798) #32	STX12 (ENSNVIG00000023800) #33	PP1R8 (ENSNVIG00000023801) #34	THEMIS2 (ENSNVIG00000023803)	RPA2 (ENSNVIG00000023804)	SMPDL3B (ENSNVIG00000023805)
Ferret	MODERN SPECIES	167	DHDDS (ENSMPUG00000015707)	ENSMPUG00000015706	RPS6KA1 (ENSMPUG00000015702)	ARID1A (ENSMPUG00000015675)	PIGV (ENSMPUG00000015674)	ZDHHC18 (ENSMPUG00000015672)	ENSMPUG00000018816	GPN2 (ENSMPUG00000015666)	GPATCH3 (ENSMPUG00000015665)	NR0B2 (ENSMPUG00000015664)	NUDC (ENSMPUG00000015663)	KDF1 (ENSMPUG00000015660)	TRNP1 (ENSMPUG00000015658)	TENT5B (ENSMPUG00000015656) #19	SLC9A1 (ENSMPUG00000015654) #21	WDTC1 (ENSMPUG00000015651) #22	TMEM222 (ENSMPUG00000015642) #23	SYTL1 (ENSMPUG00000015617) #24	MAP3K6 (ENSMPUG00000015615) #25	CD164L2 (ENSMPUG00000015613) #26	GPR3 (ENSMPUG00000018813) #27	WASF2 (ENSMPUG00000015601) #28	AHDC1 (ENSMPUG00000018811) #29	FGR (ENSMPUG00000015600) #30	ENSMPUG00000015599	FAM76A (ENSMPUG00000015579) #32	STX12 (ENSMPUG00000015578) #33	PPP1R8 (ENSMPUG00000015577) #34	THEMIS2 (ENSMPUG00000015575)	RPA2 (ENSMPUG00000015563)	SMPDL3B (ENSMPUG00000015553)
Canidae	ANCESTRAL SPECIES	14	ENSGT00390000007879	ENSGT00940000159314	ENSGT00940000155194	ENSGT00390000013174	ENSGT00940000156585	ENSGT01090000260040.b.b.b.a	ENSGT00950000183172.B	ENSGT00390000004191	ENSGT00390000015719.c	ENSGT00940000155361	ENSGT00390000016565	ENSGT00900000143263	ENSGT00390000017418	ENSGT00940000160747 #19	ENSGT00940000156338 #21	ENSGT00950000182900.B #22	ENSGT00390000007371 #23	ENSGT00940000160932 #24	ENSGT00940000159398 #25	ENSGT00530000063929.a.b #26	ENSGT01060000248564.b.a.a.a #27	ENSGT00950000182962.b.a #28	ENSGT00390000018883 #29	ENSGT00940000157554 #30	ENSGT00940000163178	ENSGT00940000160073 #32	ENSGT01000000214440.A.a.b.a #33	ENSGT00940000156115 #34	ENSGT00530000063770.c.a	ENSGT00390000010045	ENSGT00950000183182.a.a
Canis_lupus	ANCESTRAL SPECIES	6	ENSGT00390000007879	ENSGT00940000159314	ENSGT00940000155194	ENSGT00390000013174	ENSGT00940000156585	ENSGT01090000260040.b.b.b.a	ENSGT00950000183172.B	ENSGT00390000004191	ENSGT00390000015719.c	ENSGT00940000155361	ENSGT00390000016565	ENSGT00900000143263	ENSGT00390000017418	ENSGT00940000160747 #19	ENSGT00940000156338 #21	ENSGT00950000182900.B #22	ENSGT00390000007371 #23	ENSGT00940000160932 #24	ENSGT00940000159398 #25	ENSGT00530000063929.a.b #26	ENSGT01060000248564.b.a.a.a #27	ENSGT00950000182962.b.a #28	ENSGT00390000018883 #29	ENSGT00940000157554 #30	ENSGT00940000163178	ENSGT00940000160073 #32	ENSGT01000000214440.A.a.b.a #33	ENSGT00940000156115 #34	ENSGT00530000063770.c.a	ENSGT00390000010045	ENSGT00950000183182.a.a
Dog	MODERN SPECIES	11	LIN28A (ENSCAFG00845012312)	HMGN2 (ENSCAFG00845012085)	RPS6KA1 (ENSCAFG00845011855)	ARID1A (ENSCAFG00845011619)	PIGV (ENSCAFG00845011546)	ZDHHC18 (ENSCAFG00845011342)	GPN2 (ENSCAFG00845011238)	GPATCH3 (ENSCAFG00845011199)	NR0B2 (ENSCAFG00845011182)	NUDC (ENSCAFG00845011150)	KDF1 (ENSCAFG00845011124)	ENSCAFG00845011115	TRNP1 (ENSCAFG00845011105)	TENT5B (ENSCAFG00845011088) #19	SLC9A1 (ENSCAFG00845011051) #21	WDTC1 (ENSCAFG00845010979) #22	TMEM222 (ENSCAFG00845010930) #23	SYTL1 (ENSCAFG00845010866) #24	MAP3K6 (ENSCAFG00845010722) #25	CD164L2 (ENSCAFG00845010625) #26	GPR3 (ENSCAFG00845010599) #27	WASF2 (ENSCAFG00845010413) #28	FGR (ENSCAFG00845010301) #30	ENSCAFG00845010242	FAM76A (ENSCAFG00845011543) #32	STX12 (ENSCAFG00845011509) #33	PPP1R8 (ENSCAFG00845011474) #34	RPA2 (ENSCAFG00845011391)	THEMIS2 (ENSCAFG00845011158)	SMPDL3B (ENSCAFG00845011070)	XKR8 (ENSCAFG00845011047)
Dingo	MODERN SPECIES	41	RPS6KA1 (ENSCAFG00020021436)	ARID1A (ENSCAFG00020021464)	PIGV (ENSCAFG00020021632)	ZDHHC18 (ENSCAFG00020021635)	SFN (ENSCAFG00020021636)	ENSCAFG00020021637	ENSCAFG00020021638	GPATCH3 (ENSCAFG00020021640)	NR0B2 (ENSCAFG00020021643)	NUDC (ENSCAFG00020021647)	KDF1 (ENSCAFG00020021675)	ENSCAFG00020021677	TRNP1 (ENSCAFG00020021680)	TENT5B (ENSCAFG00020021681) #19	SLC9A1 (ENSCAFG00020021719) #21	WDTC1 (ENSCAFG00020022295) #22	TMEM222 (ENSCAFG00020022297) #23	MAP3K6 (ENSCAFG00020022327) #25	CD164L2 (ENSCAFG00020022358) #26	GPR3 (ENSCAFG00020022364) #27	WASF2 (ENSCAFG00020022369) #28	AHDC1 (ENSCAFG00020022386) #29	FGR (ENSCAFG00020022400) #30	IFI6 (ENSCAFG00020023299)	FAM76A (ENSCAFG00020023311) #32	STX12 (ENSCAFG00020023387) #33	PPP1R8 (ENSCAFG00020023390) #34	THEMIS2 (ENSCAFG00020023394)	RPA2 (ENSCAFG00020023397)	ENSCAFG00020023408	XKR8 (ENSCAFG00020023415)
Red fox	MODERN SPECIES	103	LIN28A (ENSVVUG00000011926)	DHDDS (ENSVVUG00000011934)	RPS6KA1 (ENSVVUG00000011954)	ARID1A (ENSVVUG00000011964)	PIGV (ENSVVUG00000011980)	ZDHHC18 (ENSVVUG00000012001)	SFN (ENSVVUG00000012027)	GPN2 (ENSVVUG00000012034)	GPATCH3 (ENSVVUG00000012041)	NR0B2 (ENSVVUG00000012044)	NUDC (ENSVVUG00000012049)	KDF1 (ENSVVUG00000012057)	ENSVVUG00000012063	TENT5B (ENSVVUG00000012066) #19	SLC9A1 (ENSVVUG00000012068) #21	WDTC1 (ENSVVUG00000012082) #22	TMEM222 (ENSVVUG00000012088) #23	SYTL1 (ENSVVUG00000012094) #24	CD164L2 (ENSVVUG00000012153) #26	GPR3 (ENSVVUG00000012155) #27	WASF2 (ENSVVUG00000012157) #28	AHDC1 (ENSVVUG00000012164) #29	FGR (ENSVVUG00000012177) #30	IFI6 (ENSVVUG00000012198)	FAM76A (ENSVVUG00000012204) #32	STX12 (ENSVVUG00000012213) #33	PPP1R8 (ENSVVUG00000012220) #34	THEMIS2 (ENSVVUG00000012229)	RPA2 (ENSVVUG00000012237)	SMPDL3B (ENSVVUG00000012240)	XKR8 (ENSVVUG00000012245)
Artiodactyla	ANCESTRAL SPECIES		ENSGT00950000182802.B.a.b	ENSGT00940000159314	ENSGT00940000155194	ENSGT00390000013174	ENSGT00940000156585	ENSGT01090000260040.b.b.b.a	ENSGT00950000183172.B	ENSGT00390000004191	ENSGT00390000015719.c	ENSGT00940000155361	ENSGT00390000016565	ENSGT00900000143263	ENSGT00390000017418	ENSGT00940000160747 #19	ENSGT00940000156338 #21	ENSGT00950000182900.B #22	ENSGT00390000007371 #23	ENSGT00940000160932 #24	ENSGT00940000159398 #25	ENSGT00940000163188	ENSGT00530000063929.a.b #26	ENSGT01060000248564.b.a.a.a #27	ENSGT00950000182962.b.a #28	ENSGT00390000018883 #29	ENSGT00940000157554 #30	ENSGT00940000163178	ENSGT00940000160073 #32	ENSGT01000000214440.A.a.b.a #33	ENSGT00940000156115 #34	ENSGT00530000063770.c.a	ENSGT00390000010045
Artiodactyla_a	ANCESTRAL SPECIES		ENSGT00950000182802.B.a.b	ENSGT00940000159314	ENSGT00940000155194	ENSGT00390000013174	ENSGT00940000156585	ENSGT01090000260040.b.b.b.a	ENSGT00950000183172.B	ENSGT00390000004191	ENSGT00390000015719.c	ENSGT00940000155361	ENSGT00390000016565	ENSGT00900000143263	ENSGT00390000017418	ENSGT00940000160747 #19	ENSGT00940000156338 #21	ENSGT00950000182900.B #22	ENSGT00390000007371 #23	ENSGT00940000160932 #24	ENSGT00940000159398 #25	ENSGT00940000163188	ENSGT00530000063929.a.b #26	ENSGT01060000248564.b.a.a.a #27	ENSGT00950000182962.b.a #28	ENSGT00390000018883 #29	ENSGT00940000157554 #30	ENSGT00940000163178	ENSGT00940000160073 #32	ENSGT01000000214440.A.a.b.a #33	ENSGT00940000156115 #34	ENSGT00530000063770.c.a	ENSGT00390000010045
Artiodactyla_b	ANCESTRAL SPECIES		ENSGT00950000182802.B.a.b	ENSGT00940000159314	ENSGT00940000155194	ENSGT00390000013174	ENSGT00940000156585	ENSGT01090000260040.b.b.b.a	ENSGT00950000183172.B	ENSGT00390000004191	ENSGT00390000015719.c	ENSGT00940000155361	ENSGT00390000016565	ENSGT00900000143263	ENSGT00390000017418	ENSGT00940000160747 #19	ENSGT00940000156338 #21	ENSGT00950000182900.B #22	ENSGT00390000007371 #23	ENSGT00940000160932 #24	ENSGT00940000159398 #25	ENSGT00940000163188	ENSGT00530000063929.a.b #26	ENSGT01060000248564.b.a.a.a #27	ENSGT00950000182962.b.a #28	ENSGT00390000018883 #29	ENSGT00940000157554 #30	ENSGT00940000163178	ENSGT00940000160073 #32	ENSGT01000000214440.A.a.b.a #33	ENSGT00940000156115 #34	ENSGT00530000063770.c.a	ENSGT00390000010045
Pecora	ANCESTRAL SPECIES	16	ENSGT00950000182802.B.b	ENSGT00940000159314	ENSGT00940000155194	ENSGT00390000013174	ENSGT00940000156585	ENSGT01090000260040.b.b.b.a	ENSGT00950000183172.B	ENSGT00390000004191	ENSGT00390000015719.c	ENSGT00940000155361	ENSGT00390000016565	ENSGT00900000143263	ENSGT00390000017418	ENSGT00940000160747 #19	ENSGT00940000156338 #21	ENSGT00950000182900.B #22	ENSGT00390000007371 #23	ENSGT00940000160932 #24	ENSGT00940000159398 #25	ENSGT00940000163188	ENSGT00530000063929.a.b #26	ENSGT01060000248564.b.a.a.a #27	ENSGT00950000182962.b.a #28	ENSGT00390000018883 #29	ENSGT00940000157554 #30	ENSGT00940000163178	ENSGT00940000160073 #32	ENSGT01000000214440.A.a.b.a #33	ENSGT00940000156115 #34	ENSGT00530000063770.c.a	ENSGT00390000010045
Yarkand deer	MODERN SPECIES	31	ENSCHYG00000001546	ENSCHYG00000001562	DHDDS (ENSCHYG00000001603)	RPS6KA1 (ENSCHYG00000001724)	ARID1A (ENSCHYG00000001939)	PIGV (ENSCHYG00000001986)	ZDHHC18 (ENSCHYG00000002005)	SFN (ENSCHYG00000002025)	GPN2 (ENSCHYG00000002038)	GPATCH3 (ENSCHYG00000002063)	NR0B2 (ENSCHYG00000002069)	NUDC (ENSCHYG00000002088)	KDF1 (ENSCHYG00000002127)	TENT5B (ENSCHYG00000002147) #19	SLC9A1 (ENSCHYG00000002158) #21	WDTC1 (ENSCHYG00000002182) #22	TMEM222 (ENSCHYG00000002225) #23	SYTL1 (ENSCHYG00000002263) #24	MAP3K6 (ENSCHYG00000002378) #25	CD164L2 (ENSCHYG00000002659) #26	GPR3 (ENSCHYG00000002685) #27	WASF2 (ENSCHYG00000002699) #28	ENSCHYG00000002732	AHDC1 (ENSCHYG00000002738) #29	ENSCHYG00000002750 #30	IFI6 (ENSCHYG00000002768)	FAM76A (ENSCHYG00000002798) #32	STX12 (ENSCHYG00000002839) #33	PPP1R8 (ENSCHYG00000002883) #34	ENSCHYG00000002910	THEMIS2 (ENSCHYG00000002918)
Percora_a	ANCESTRAL SPECIES	5	ENSGT00950000182802.B.b	ENSGT00940000159314	ENSGT00940000155194	ENSGT00390000013174	ENSGT00940000156585	ENSGT01090000260040.b.b.b.a	ENSGT00950000183172.B	ENSGT00390000004191	ENSGT00390000015719.c	ENSGT00940000155361	ENSGT00390000016565	ENSGT00900000143263	ENSGT00390000017418	ENSGT00940000160747 #19	ENSGT00940000156338 #21	ENSGT00950000182900.B #22	ENSGT00390000007371 #23	ENSGT00940000160932 #24	ENSGT00940000159398 #25	ENSGT00940000163188	ENSGT00530000063929.a.b #26	ENSGT01060000248564.b.a.a.a #27	ENSGT00950000182962.b.a #28	ENSGT00390000018883 #29	ENSGT00940000157554 #30	ENSGT00940000163178	ENSGT00940000160073 #32	ENSGT01000000214440.A.a.b.a #33	ENSGT00940000156115 #34	ENSGT00530000063770.c.a	ENSGT00390000010045
Bovidae	ANCESTRAL SPECIES	8	ENSGT00950000182802.B.b	ENSGT00940000159314	ENSGT00940000155194	ENSGT00390000013174	ENSGT00940000156585	ENSGT01090000260040.b.b.b.a	ENSGT00950000183172.B	ENSGT00390000004191	ENSGT00390000015719.c	ENSGT00940000155361	ENSGT00390000016565	ENSGT00900000143263	ENSGT00390000017418	ENSGT00940000160747 #19	ENSGT00940000156338 #21	ENSGT00950000182900.B #22	ENSGT00390000007371 #23	ENSGT00940000160932 #24	ENSGT00940000159398 #25	ENSGT00940000163188	ENSGT00530000063929.a.b #26	ENSGT01060000248564.b.a.a.a #27	ENSGT00950000182962.b.a #28	ENSGT00390000018883 #29	ENSGT00940000157554 #30	ENSGT00940000163178	ENSGT00940000160073 #32	ENSGT01000000214440.A.a.b.a #33	ENSGT00940000156115 #34	ENSGT00530000063770.c.a	ENSGT00390000010045.k
Bovinae	ANCESTRAL SPECIES	5	ENSGT00390000007879	ENSGT00950000182802.B.b	ENSGT00940000159314	ENSGT00940000155194	ENSGT00390000013174	ENSGT00940000156585	ENSGT01090000260040.b.b.b.a	ENSGT00950000183172.B	ENSGT00390000004191	ENSGT00390000015719.c	ENSGT00940000155361	ENSGT00390000016565	ENSGT00390000017418	ENSGT00940000160747 #19	ENSGT00940000156338 #21	ENSGT00950000182900.B #22	ENSGT00390000007371 #23	ENSGT00940000160932 #24	ENSGT00940000159398 #25	ENSGT00530000063929.a.b #26	ENSGT01060000248564.b.a.a.a #27	ENSGT00950000182962.b.a #28	ENSGT00390000018883 #29	ENSGT00940000157554 #30	ENSGT00940000163178	ENSGT00940000160073 #32	ENSGT01000000214440.A.a.b.a #33	ENSGT00940000156115 #34	ENSGT00530000063770.c.a	ENSGT00390000010045.k.b	ENSGT00950000183182.a.a
Bos	ANCESTRAL SPECIES	6	ENSGT00390000007879	ENSGT00950000182802.B.b	ENSGT00940000159314	ENSGT00940000155194	ENSGT00390000013174	ENSGT00940000156585	ENSGT01090000260040.b.b.b.a	ENSGT00950000183172.B	ENSGT00390000004191	ENSGT00390000015719.c	ENSGT00940000155361	ENSGT00390000016565	ENSGT00390000017418	ENSGT00940000160747 #19	ENSGT00940000156338 #21	ENSGT00950000182900.B #22	ENSGT00390000007371 #23	ENSGT00940000160932 #24	ENSGT00940000159398 #25	ENSGT00530000063929.a.b #26	ENSGT01060000248564.b.a.a.a #27	ENSGT00950000182962.b.a #28	ENSGT00390000018883 #29	ENSGT00940000157554 #30	ENSGT00940000163178	ENSGT00940000160073 #32	ENSGT01000000214440.A.a.b.a #33	ENSGT00940000156115 #34	ENSGT00530000063770.c.a	ENSGT00390000010045.k.b	ENSGT00950000183182.a.a
Bos_a	ANCESTRAL SPECIES	4	ENSGT00390000007879	ENSGT00950000184988.a.a	ENSGT00950000182802.B.b	ENSGT00940000159314	ENSGT00940000155194	ENSGT00390000013174	ENSGT00940000156585	ENSGT01090000260040.b.b.b.a	ENSGT00950000183172.B	ENSGT00390000004191	ENSGT00390000015719.c	ENSGT00940000155361	ENSGT00390000016565	ENSGT00940000160747 #19	ENSGT00940000156338 #21	ENSGT00950000182900.B #22	ENSGT00390000007371 #23	ENSGT00940000160932 #24	ENSGT00940000159398 #25	ENSGT00530000063929.a.b #26	ENSGT01060000248564.b.a.a.a #27	ENSGT00950000182962.b.a #28	ENSGT00390000018883 #29	ENSGT00940000157554 #30	ENSGT00940000163178	ENSGT00940000160073 #32	ENSGT01000000214440.A.a.b.a #33	ENSGT00940000156115 #34	ENSGT00530000063770.c.a	ENSGT00390000010045.k.b	ENSGT00950000183182.a.a
Wild yak	MODERN SPECIES	762	ENSBMUG00000016448	DHDDS (ENSBMUG00000016476)	ENSBMUG00000016490	RPS6KA1 (ENSBMUG00000016615)	ARID1A (ENSBMUG00000016706)	PIGV (ENSBMUG00000016736)	ZDHHC18 (ENSBMUG00000016747)	SFN (ENSBMUG00000016763)	GPN2 (ENSBMUG00000016798)	GPATCH3 (ENSBMUG00000016826)	NR0B2 (ENSBMUG00000016841)	NUDC (ENSBMUG00000016856)	KDF1 (ENSBMUG00000016871)	TENT5B (ENSBMUG00000016880) #19	SLC9A1 (ENSBMUG00000016893) #21	WDTC1 (ENSBMUG00000016909) #22	TMEM222 (ENSBMUG00000016948) #23	SYTL1 (ENSBMUG00000017014) #24	MAP3K6 (ENSBMUG00000017097) #25	CD164L2 (ENSBMUG00000017125) #26	GPR3 (ENSBMUG00000017133) #27	WASF2 (ENSBMUG00000017163) #28	AHDC1 (ENSBMUG00000017189) #29	FGR (ENSBMUG00000017246) #30	IFI6 (ENSBMUG00000017279)	FAM76A (ENSBMUG00000017312) #32	STX12 (ENSBMUG00000017327) #33	PPP1R8 (ENSBMUG00000017340) #34	THEMIS2 (ENSBMUG00000017367)	ENSBMUG00000017390	SMPDL3B (ENSBMUG00000017413)
Domestic yak	MODERN SPECIES	11	ENSBGRG00000006850	ENSBGRG00000006878	RPS6KA1 (ENSBGRG00000007015)	ENSBGRG00000008100	ARID1A (ENSBGRG00000008144)	PIGV (ENSBGRG00000008647)	ZDHHC18 (ENSBGRG00000008689)	GPN2 (ENSBGRG00000008777)	SFN (ENSBGRG00000008845)	GPATCH3 (ENSBGRG00000008880)	ENSBGRG00000008953	NUDC (ENSBGRG00000008992)	KDF1 (ENSBGRG00000009082)	TENT5B (ENSBGRG00000009168) #19	SLC9A1 (ENSBGRG00000009191) #21	WDTC1 (ENSBGRG00000009375) #22	ENSBGRG00000009602 #23	SYTL1 (ENSBGRG00000009724) #24	MAP3K6 (ENSBGRG00000009866) #25	CD164L2 (ENSBGRG00000011089) #26	GPR3 (ENSBGRG00000011392) #27	WASF2 (ENSBGRG00000011448) #28	AHDC1 (ENSBGRG00000011636) #29	FGR (ENSBGRG00000011695) #30	IFI6 (ENSBGRG00000011996)	FAM76A (ENSBGRG00000012076) #32	ENSBGRG00000012364	STX12 (ENSBGRG00000012395) #33	PPP1R8 (ENSBGRG00000012519) #34	ENSBGRG00000012570	THEMIS2 (ENSBGRG00000012596)
Bos_b	ANCESTRAL SPECIES	20	ENSGT00390000007879	ENSGT00950000182802.B.b	ENSGT00940000159314	ENSGT00940000155194	ENSGT00390000013174	ENSGT00940000156585	ENSGT01090000260040.b.b.b.a	ENSGT00950000183172.B	ENSGT00390000004191	ENSGT00390000015719.c	ENSGT00940000155361	ENSGT00390000016565	ENSGT00390000017418	ENSGT00940000160747 #19	ENSGT00940000156338 #21	ENSGT00950000182900.B #22	ENSGT00390000007371 #23	ENSGT00940000160932 #24	ENSGT00940000159398 #25	ENSGT00530000063929.a.b #26	ENSGT01060000248564.b.a.a.a #27	ENSGT00950000182962.b.a #28	ENSGT00390000018883 #29	ENSGT00940000157554 #30	ENSGT00940000163178	ENSGT00940000160073 #32	ENSGT01000000214440.A.a.b.a #33	ENSGT00940000156115 #34	ENSGT00530000063770.c.a	ENSGT00390000010045.k.b	ENSGT00950000183182.a.a
Hybrid Bos Indicus	MODERN SPECIES	11	ENSBIXG00005000153	RPS6KA1 (ENSBIXG00005008415)	ARID1A (ENSBIXG00005008637)	PIGV (ENSBIXG00005008695)	ZDHHC18 (ENSBIXG00005008730)	SFN (ENSBIXG00005008749)	GPN2 (ENSBIXG00005008762)	GPATCH3 (ENSBIXG00005008799)	NR0B2 (ENSBIXG00005005573)	KDF1 (ENSBIXG00005000292)	NUDC (ENSBIXG00005008880)	TRNP1 (ENSBIXG00005008892)	TENT5B (ENSBIXG00005008901) #19	SLC9A1 (ENSBIXG00005008927) #21	ENSBIXG00005008936	WDTC1 (ENSBIXG00005000370) #22	SYTL1 (ENSBIXG00005009106) #24	MAP3K6 (ENSBIXG00005006314) #25	CD164L2 (ENSBIXG00005009652) #26	GPR3 (ENSBIXG00005009673) #27	WASF2 (ENSBIXG00005009713) #28	AHDC1 (ENSBIXG00005009747) #29	FGR (ENSBIXG00005009794) #30	IFI6 (ENSBIXG00005009818)	ENSBIXG00005000618	FAM76A (ENSBIXG00005009850) #32	STX12 (ENSBIXG00005009866) #33	PPP1R8 (ENSBIXG00005000665) #34	THEMIS2 (ENSBIXG00005009901)	ENSBIXG00005009925	SMPDL3B (ENSBIXG00005009947)
Cow	MODERN SPECIES	11	ENSBTAG00000049812	DHDDS (ENSBTAG00000003235)	RPS6KA1 (ENSBTAG00000014447)	ARID1A (ENSBTAG00000001024)	PIGV (ENSBTAG00000009796)	ZDHHC18 (ENSBTAG00000046672)	SFN (ENSBTAG00000009223)	GPN2 (ENSBTAG00000014850)	GPATCH3 (ENSBTAG00000014849)	NR0B2 (ENSBTAG00000014848)	NUDC (ENSBTAG00000004416)	KDF1 (ENSBTAG00000019252)	TRNP1 (ENSBTAG00000054719)	TENT5B (ENSBTAG00000018413) #19	SLC9A1 (ENSBTAG00000008766) #21	WDTC1 (ENSBTAG00000053588) #22	ENSBTAG00000050795 #23	TMEM222 (ENSBTAG00000010249) #23	SYTL1 (ENSBTAG00000010253)	MAP3K6 (ENSBTAG00000010254) #25	CD164L2 (ENSBTAG00000019728) #26	GPR3 (ENSBTAG00000002505) #27	WASF2 (ENSBTAG00000018374) #28	AHDC1 (ENSBTAG00000037456) #29	FGR (ENSBTAG00000011784) #30	IFI6 (ENSBTAG00000007554)	FAM76A (ENSBTAG00000019614) #32	STX12 (ENSBTAG00000001192) #33	PPP1R8 (ENSBTAG00000003866) #34	THEMIS2 (ENSBTAG00000006223)	RPA2 (ENSBTAG00000006225)
American bison	MODERN SPECIES	3363	DHDDS (ENSBBBG00000014041)	ENSBBBG00000013997	ENSBBBG00000007981	RPS6KA1 (ENSBBBG00000013977)	ARID1A (ENSBBBG00000013911)	PIGV (ENSBBBG00000002976)	ZDHHC18 (ENSBBBG00000002907)	SFN (ENSBBBG00000002970)	GPN2 (ENSBBBG00000002968)	GPATCH3 (ENSBBBG00000013829)	NR0B2 (ENSBBBG00000013818)	NUDC (ENSBBBG00000013813)	KDF1 (ENSBBBG00000013807)	TENT5B (ENSBBBG00000002954) #19	SLC9A1 (ENSBBBG00000013790) #21	WDTC1 (ENSBBBG00000013773) #22	ENSBBBG00000013753 #23	SYTL1 (ENSBBBG00000013744) #24	MAP3K6 (ENSBBBG00000013689) #25	CD164L2 (ENSBBBG00000013599) #26	GPR3 (ENSBBBG00000013590) #27	WASF2 (ENSBBBG00000013586) #28	FGR (ENSBBBG00000013566) #30	IFI6 (ENSBBBG00000002792)	FAM76A (ENSBBBG00000013527) #32	STX12 (ENSBBBG00000013509) #33	PPP1R8 (ENSBBBG00000013499) #34	THEMIS2 (ENSBBBG00000013489)	ENSBBBG00000013481	SMPDL3B (ENSBBBG00000013467)	XKR8 (ENSBBBG00000013441)
Caprinae	ANCESTRAL SPECIES	5	ENSGT00390000010218.f.e.b	ENSGT00940000159314	ENSGT00940000155194	ENSGT00390000013174	ENSGT00940000156585	ENSGT01090000260040.b.b.b.a	ENSGT00950000183172.B	ENSGT00390000004191	ENSGT00390000015719.c	ENSGT00940000155361	ENSGT00390000016565	ENSGT00900000143263	ENSGT00390000017418	ENSGT00940000160747 #19	ENSGT00940000156338 #21	ENSGT00950000182900.B #22	ENSGT00730000110997.k.a	ENSGT00390000007371 #23	ENSGT00940000160932 #24	ENSGT00940000159398 #25	ENSGT00940000163188	ENSGT00530000063929.a.b #26	ENSGT01060000248564.b.a.a.a #27	ENSGT00950000182962.b.a.f #28	ENSGT00390000018883 #29	ENSGT00940000157554 #30	ENSGT00940000163178	ENSGT00940000160073 #32	ENSGT01000000214440.A.a.b.a #33	ENSGT00940000156115 #34	ENSGT00530000063770.c.a
Rambouillet Sheep	MODERN SPECIES	11	ENSOARG00020023265	ENSOARG00020023241	RPS6KA1 (ENSOARG00020022904)	ARID1A (ENSOARG00020022625)	PIGV (ENSOARG00020022591)	ZDHHC18 (ENSOARG00020022509)	SFN (ENSOARG00020022494)	GPN2 (ENSOARG00020022460)	GPATCH3 (ENSOARG00020022411)	NR0B2 (ENSOARG00020022389)	NUDC (ENSOARG00020022358)	KDF1 (ENSOARG00020022342)	TRNP1 (ENSOARG00020022331)	TENT5B (ENSOARG00020022308) #19	SLC9A1 (ENSOARG00020022275) #21	WDTC1 (ENSOARG00020022036) #22	ENSOARG00020022006	TMEM222 (ENSOARG00020021961) #23	SYTL1 (ENSOARG00020021924) #24	MAP3K6 (ENSOARG00020021395) #25	CD164L2 (ENSOARG00020021247) #26	GPR3 (ENSOARG00020021228) #27	WASF2 (ENSOARG00020021160) #28	AHDC1 (ENSOARG00020021138) #29	FGR (ENSOARG00020021091) #30	IFI6 (ENSOARG00020021024)	FAM76A (ENSOARG00020020517) #32	STX12 (ENSOARG00020020460) #33	PPP1R8 (ENSOARG00020020388) #34	THEMIS2 (ENSOARG00020020351)	RPA2 (ENSOARG00020020276)
Goat	MODERN SPECIES	11	ENSCHIG00000017745	RPS6KA1 (ENSCHIG00000015239)	ARID1A (ENSCHIG00000010785)	PIGV (ENSCHIG00000024521)	ZDHHC18 (ENSCHIG00000007312)	SFN (ENSCHIG00000001148)	GPN2 (ENSCHIG00000013538)	GPATCH3 (ENSCHIG00000024245)	NR0B2 (ENSCHIG00000026969)	NUDC (ENSCHIG00000009787)	KDF1 (ENSCHIG00000024708)	ENSCHIG00000019557	TRNP1 (ENSCHIG00000010909)	TENT5B (ENSCHIG00000019519) #19	SLC9A1 (ENSCHIG00000023737) #21	WDTC1 (ENSCHIG00000011601) #22	ENSCHIG00000005039	TMEM222 (ENSCHIG00000018082) #23	SYTL1 (ENSCHIG00000022293) #24	MAP3K6 (ENSCHIG00000004209) #25	FCN3 (ENSCHIG00000023030)	CD164L2 (ENSCHIG00000024012) #26	GPR3 (ENSCHIG00000011308) #27	WASF2 (ENSCHIG00000023712) #28	AHDC1 (ENSCHIG00000015263) #29	FGR (ENSCHIG00000015392) #30	IFI6 (ENSCHIG00000017858)	FAM76A (ENSCHIG00000010125) #32	STX12 (ENSCHIG00000024442) #33	PPP1R8 (ENSCHIG00000024272) #34	THEMIS2 (ENSCHIG00000012658)
Siberian musk deer	MODERN SPECIES	354	ENSMMSG00000005048	RPS6KA1 (ENSMMSG00000004814)	ENSMMSG00000004735	ARID1A (ENSMMSG00000004679)	PIGV (ENSMMSG00000004638)	ZDHHC18 (ENSMMSG00000004577)	SFN (ENSMMSG00000019892)	GPN2 (ENSMMSG00000019861)	GPATCH3 (ENSMMSG00000019842)	NR0B2 (ENSMMSG00000019826)	NUDC (ENSMMSG00000019794)	KDF1 (ENSMMSG00000019780)	TRNP1 (ENSMMSG00000019769)	TENT5B (ENSMMSG00000019758) #19	SLC9A1 (ENSMMSG00000019705) #21	WDTC1 (ENSMMSG00000019642) #22	TMEM222 (ENSMMSG00000019584) #23	SYTL1 (ENSMMSG00000019547) #24	MAP3K6 (ENSMMSG00000019207) #25	CD164L2 (ENSMMSG00000019144) #26	GPR3 (ENSMMSG00000019127) #27	WASF2 (ENSMMSG00000019069) #28	AHDC1 (ENSMMSG00000019054) #29	FGR (ENSMMSG00000019004) #30	IFI6 (ENSMMSG00000018977)	ENSMMSG00000018954	FAM76A (ENSMMSG00000018778) #32	STX12 (ENSMMSG00000018678) #33	PPP1R8 (ENSMMSG00000018605) #34	ENSMMSG00000018593	ENSMMSG00000018576
Cetacea	ANCESTRAL SPECIES		ENSGT00950000182802.B.a.b	ENSGT00940000159314	ENSGT00940000155194	ENSGT00390000013174	ENSGT00940000156585	ENSGT01090000260040.b.b.b.a	ENSGT00950000183172.B	ENSGT00390000004191	ENSGT00390000015719.c	ENSGT00940000155361	ENSGT00390000016565	ENSGT00900000143263	ENSGT00390000017418	ENSGT00940000160747 #19	ENSGT00940000156338 #21	ENSGT00950000182900.B #22	ENSGT00390000007371 #23	ENSGT00940000160932 #24	ENSGT00940000159398 #25	ENSGT00940000163188	ENSGT00530000063929.a.b #26	ENSGT01060000248564.b.a.a.a #27	ENSGT00950000182962.b.a #28	ENSGT00390000018883 #29	ENSGT00940000157554 #30	ENSGT00940000163178	ENSGT00940000160073 #32	ENSGT01000000214440.A.a.b.a #33	ENSGT00940000156115 #34	ENSGT00530000063770.c.a	ENSGT00390000010045.i
Odontoceti	ANCESTRAL SPECIES		ENSGT00950000182802.B.a.b	ENSGT00940000159314	ENSGT00940000155194	ENSGT00390000013174	ENSGT00940000156585	ENSGT01090000260040.b.b.b.a	ENSGT00950000183172.B	ENSGT00390000004191	ENSGT00390000015719.c	ENSGT00940000155361	ENSGT00390000016565	ENSGT00900000143263	ENSGT00390000017418	ENSGT00940000160747 #19	ENSGT00940000156338 #21	ENSGT00950000182900.B #22	ENSGT00390000007371 #23	ENSGT00940000160932 #24	ENSGT00940000159398 #25	ENSGT00940000163188	ENSGT00530000063929.a.b #26	ENSGT01060000248564.b.a.a.a #27	ENSGT00950000182962.b.a #28	ENSGT00390000018883 #29	ENSGT00940000157554 #30	ENSGT00940000163178	ENSGT00940000160073 #32	ENSGT01000000214440.A.a.b.a #33	ENSGT00940000156115 #34	ENSGT00530000063770.c.a	ENSGT00390000010045.i
Odontoceti_a	ANCESTRAL SPECIES		ENSGT00950000182802.B.a.b	ENSGT00940000159314	ENSGT00940000155194	ENSGT00390000013174	ENSGT00940000156585	ENSGT01090000260040.b.b.b.a	ENSGT00950000183172.B	ENSGT00390000004191	ENSGT00390000015719.c	ENSGT00940000155361	ENSGT00390000016565	ENSGT00900000143263	ENSGT00390000017418	ENSGT00940000160747 #19	ENSGT00940000156338 #21	ENSGT00950000182900.B #22	ENSGT00390000007371 #23	ENSGT00940000160932 #24	ENSGT00940000159398 #25	ENSGT00940000163188	ENSGT00530000063929.a.b #26	ENSGT01060000248564.b.a.a.a #27	ENSGT00950000182962.b.a #28	ENSGT00390000018883 #29	ENSGT00940000157554 #30	ENSGT00940000163178	ENSGT00940000160073 #32	ENSGT01000000214440.A.a.b.a #33	ENSGT00940000156115 #34	ENSGT00530000063770.c.a	ENSGT00390000010045.i
Odontoceti_b	ANCESTRAL SPECIES		ENSGT00950000182802.B.a.b	ENSGT00940000159314	ENSGT00940000155194	ENSGT00390000013174	ENSGT00940000156585	ENSGT01090000260040.b.b.b.a	ENSGT00950000183172.B	ENSGT00390000004191	ENSGT00390000015719.c	ENSGT00940000155361	ENSGT00390000016565	ENSGT00900000143263	ENSGT00390000017418	ENSGT00940000160747 #19	ENSGT00940000156338 #21	ENSGT00950000182900.B #22	ENSGT00390000007371 #23	ENSGT00940000160932 #24	ENSGT00940000159398 #25	ENSGT00940000163188	ENSGT00530000063929.a.b #26	ENSGT01060000248564.b.a.a.a #27	ENSGT00950000182962.b.a #28	ENSGT00390000018883 #29	ENSGT00940000157554 #30	ENSGT00940000163178	ENSGT00940000160073 #32	ENSGT01000000214440.A.a.b.a.a #33	ENSGT00940000156115 #34	ENSGT00530000063770.c.a	ENSGT00390000010045.i
Monodontidae	ANCESTRAL SPECIES		ENSGT00950000182802.B.a.b	ENSGT00940000159314	ENSGT00940000155194	ENSGT00390000013174	ENSGT00940000156585	ENSGT01090000260040.b.b.b.a	ENSGT00950000183172.B	ENSGT00390000004191	ENSGT00390000015719.c	ENSGT00940000155361	ENSGT00900000143263	ENSGT00390000016565	ENSGT00390000017418	ENSGT00940000160747 #19	ENSGT00940000156338 #21	ENSGT00950000182900.B #22	ENSGT00390000007371 #23	ENSGT00940000160932 #24	ENSGT00940000159398 #25	ENSGT00940000163188	ENSGT00530000063929.a.b #26	ENSGT01060000248564.b.a.a.a #27	ENSGT00950000182962.b.a #28	ENSGT00390000018883 #29	ENSGT00940000157554 #30	ENSGT00940000163178	ENSGT00940000160073 #32	ENSGT01000000214440.A.a.b.a.a #33	ENSGT00940000156115 #34	ENSGT00530000063770.c.a	ENSGT00390000010045.i
Narwhal	MODERN SPECIES	304	ENSMMNG00015005962	RPS6KA1 (ENSMMNG00015005851)	ARID1A (ENSMMNG00015005767)	PIGV (ENSMMNG00015005733)	ZDHHC18 (ENSMMNG00015005715)	SFN (ENSMMNG00015005699)	GPN2 (ENSMMNG00015005683)	GPATCH3 (ENSMMNG00015005660)	NR0B2 (ENSMMNG00015005644)	NUDC (ENSMMNG00015005615)	ENSMMNG00015005598	KDF1 (ENSMMNG00015005581)	TRNP1 (ENSMMNG00015005564)	TENT5B (ENSMMNG00015005548) #19	SLC9A1 (ENSMMNG00015005523) #21	WDTC1 (ENSMMNG00015005489) #22	TMEM222 (ENSMMNG00015005469) #23	SYTL1 (ENSMMNG00015005447) #24	MAP3K6 (ENSMMNG00015005411) #25	FCN3 (ENSMMNG00015005371)	CD164L2 (ENSMMNG00015005349) #26	GPR3 (ENSMMNG00015005327) #27	WASF2 (ENSMMNG00015005306) #28	AHDC1 (ENSMMNG00015005285) #29	FGR (ENSMMNG00015005239) #30	IFI6 (ENSMMNG00015005200)	FAM76A (ENSMMNG00015005176) #32	ENSMMNG00015005158 #33	PPP1R8 (ENSMMNG00015005107) #34	THEMIS2 (ENSMMNG00015013027)	ENSMMNG00015012999
Beluga whale	MODERN SPECIES	51	ENSDLEG00000008859	RPS6KA1 (ENSDLEG00000014105)	ARID1A (ENSDLEG00000014053)	PIGV (ENSDLEG00000014034)	ZDHHC18 (ENSDLEG00000014019)	SFN (ENSDLEG00000014011)	GPN2 (ENSDLEG00000013990)	GPATCH3 (ENSDLEG00000013973)	NR0B2 (ENSDLEG00000013970)	NUDC (ENSDLEG00000013949)	ENSDLEG00000013942	KDF1 (ENSDLEG00000013935)	TRNP1 (ENSDLEG00000013926)	FAM46B (ENSDLEG00000013920) #19	SLC9A1 (ENSDLEG00000013897) #21	WDTC1 (ENSDLEG00000013819) #22	TMEM222 (ENSDLEG00000013791) #23	SYTL1 (ENSDLEG00000013757) #24	MAP3K6 (ENSDLEG00000013702) #25	FCN3 (ENSDLEG00000013645)	CD164L2 (ENSDLEG00000013628) #26	GPR3 (ENSDLEG00000013622) #27	WASF2 (ENSDLEG00000013613) #28	AHDC1 (ENSDLEG00000013602) #29	FGR (ENSDLEG00000013542) #30	IFI6 (ENSDLEG00000013516)	FAM76A (ENSDLEG00000013491) #32	ENSDLEG00000013481 #33	PPP1R8 (ENSDLEG00000013472) #34	THEMIS2 (ENSDLEG00000013466)	ENSDLEG00000013454
Vaquita	MODERN SPECIES		RPS6KA1 (ENSPSNG00000002819)	ARID1A (ENSPSNG00000002958)	PIGV (ENSPSNG00000002982)	ZDHHC18 (ENSPSNG00000002996)	SFN (ENSPSNG00000003016)	GPN2 (ENSPSNG00000003028)	GPATCH3 (ENSPSNG00000003044)	NR0B2 (ENSPSNG00000003055)	NUDC (ENSPSNG00000003066)	KDF1 (ENSPSNG00000003088)	ENSPSNG00000003155	TRNP1 (ENSPSNG00000003165)	TENT5B (ENSPSNG00000003178) #19	ENSPSNG00000003188	SLC9A1 (ENSPSNG00000003197) #21	WDTC1 (ENSPSNG00000003225) #22	TMEM222 (ENSPSNG00000003266) #23	SYTL1 (ENSPSNG00000005181) #24	MAP3K6 (ENSPSNG00000005216) #25	FCN3 (ENSPSNG00000005274)	CD164L2 (ENSPSNG00000005310) #26	GPR3 (ENSPSNG00000005331) #27	WASF2 (ENSPSNG00000005360) #28	AHDC1 (ENSPSNG00000005397) #29	FGR (ENSPSNG00000005414) #30	IFI6 (ENSPSNG00000005464)	FAM76A (ENSPSNG00000005498) #32	ENSPSNG00000005541 #33	PPP1R8 (ENSPSNG00000005558) #34	THEMIS2 (ENSPSNG00000005589)	PDCD2 (ENSPSNG00000005696)
Dolphin	MODERN SPECIES	741																WDTC1 (ENSTTRG00000015426) #22	TMEM222 (ENSTTRG00000015450) #23	SYTL1 (ENSTTRG00000015458) #24	MAP3K6 (ENSTTRG00000015480) #25	FCN3 (ENSTTRG00000015513)
Sperm whale	MODERN SPECIES	14	PDIK1L (ENSPCTG00005005630)	CEP85 (ENSPCTG00005005549)	SH3BGRL3 (ENSPCTG00005005515)	UBXN11 (ENSPCTG00005005263)	ENSPCTG00005005213	CRYBG2 (ENSPCTG00005005148)	ZNF683 (ENSPCTG00005005094)	LIN28A (ENSPCTG00005005060)	DHDDS (ENSPCTG00005004941)	ENSPCTG00005004910	ENSPCTG00005004896	ARID1A (ENSPCTG00005004873)	PIGV (ENSPCTG00005004852)	ZDHHC18 (ENSPCTG00005004832)	ENSPCTG00005004819	WDTC1 (ENSPCTG00005004734) #22	TMEM222 (ENSPCTG00005004704) #23	IFI6 (ENSPCTG00005004689)	FAM76A (ENSPCTG00005004465) #32	STX12 (ENSPCTG00005004417) #33	PPP1R8 (ENSPCTG00005004336) #34	THEMIS2 (ENSPCTG00005004296)	RPA2 (ENSPCTG00005004266)	SMPDL3B (ENSPCTG00005004166)	XKR8 (ENSPCTG00005004138)	EYA3 (ENSPCTG00005004066)	PTAFR (ENSPCTG00005004040)	DNAJC8 (ENSPCTG00005004028)	ATP5IF1 (ENSPCTG00005004015)	SESN2 (ENSPCTG00005003993)	MED18 (ENSPCTG00005003980)
Blue whale	MODERN SPECIES		RPS6KA1 (ENSBMSG00010006719)	ARID1A (ENSBMSG00010006900)	PIGV (ENSBMSG00010006940)	ENSBMSG00010006951	ZDHHC18 (ENSBMSG00010006969)	SFN (ENSBMSG00010006986)	GPN2 (ENSBMSG00010006997)	GPATCH3 (ENSBMSG00010007019)	NR0B2 (ENSBMSG00010007031)	NUDC (ENSBMSG00010007048)	KDF1 (ENSBMSG00010007059)	ENSBMSG00010007072	TRNP1 (ENSBMSG00010007081)	TENT5B (ENSBMSG00010007093) #19	SLC9A1 (ENSBMSG00010007105) #21	WDTC1 (ENSBMSG00010007126) #22	TMEM222 (ENSBMSG00010007152) #23	SYTL1 (ENSBMSG00010007172) #24	MAP3K6 (ENSBMSG00010007232) #25	CD164L2 (ENSBMSG00010007357) #26	GPR3 (ENSBMSG00010007372) #27	WASF2 (ENSBMSG00010007386) #28	FGR (ENSBMSG00010007414) #30	IFI6 (ENSBMSG00010000005)	ENSBMSG00010000011 #32	ENSBMSG00010000015	STX12 (ENSBMSG00010000024) #33	PPP1R8 (ENSBMSG00010000031) #34	THEMIS2 (ENSBMSG00010000049)	ENSBMSG00010000072	SMPDL3B (ENSBMSG00010000155)
Camelidae	ANCESTRAL SPECIES	3	ENSGT00940000153295.a	ENSGT00390000007879	ENSGT00950000182802.B.a.b	ENSGT00950000182802.B.a.a.a.b.a.b	ENSGT00940000159314	ENSGT00940000155194	ENSGT00390000013174	ENSGT00940000156585	ENSGT00950000183172.B	ENSGT00390000004191	ENSGT00390000015719.c	ENSGT00940000155361	ENSGT00390000016565	ENSGT00940000160747 #19	ENSGT00940000156338 #21	ENSGT00950000182900.B #22	ENSGT00390000007371 #23	ENSGT00940000160932 #24	ENSGT00940000159398 #25	ENSGT00530000063929.a.b #26	ENSGT01060000248564.b.a.a.a #27	ENSGT00950000182962.b.a #28	ENSGT00390000018883 #29	ENSGT00940000157554 #30	ENSGT00940000163178	ENSGT00940000160073 #32	ENSGT01000000214440.A.a.b.a #33	ENSGT00940000156115 #34	ENSGT00530000063770.c.a	ENSGT00390000010045	ENSGT00950000183182.a.a
Alpaca	MODERN SPECIES	846																ENSVPAG00000000011 #22
Arabian camel	MODERN SPECIES	4	ZNF683 (ENSCDRG00005005912)	LIN28A (ENSCDRG00005005930)	DHDDS (ENSCDRG00005005975)	ENSCDRG00005006053	RPS6KA1 (ENSCDRG00005006116)	ARID1A (ENSCDRG00005006498)	PIGV (ENSCDRG00005006607)	ZDHHC18 (ENSCDRG00005006661)	GPN2 (ENSCDRG00005006791)	GPATCH3 (ENSCDRG00005006833)	NR0B2 (ENSCDRG00005006876)	NUDC (ENSCDRG00005006914)	KDF1 (ENSCDRG00005007013)	TENT5B (ENSCDRG00005007132) #19	SLC9A1 (ENSCDRG00005007172) #21	WDTC1 (ENSCDRG00005007230) #22	ENSCDRG00005007278 #23	SYTL1 (ENSCDRG00005007351) #24	MAP3K6 (ENSCDRG00005007422) #25	CD164L2 (ENSCDRG00005007565) #26	GPR3 (ENSCDRG00005007635) #27	WASF2 (ENSCDRG00005007664) #28	AHDC1 (ENSCDRG00005007718) #29	FGR (ENSCDRG00005007737) #30	IFI6 (ENSCDRG00005007894)	FAM76A (ENSCDRG00005007930) #32	STX12 (ENSCDRG00005008126) #33	PPP1R8 (ENSCDRG00005008155) #34	THEMIS2 (ENSCDRG00005008258)	RPA2 (ENSCDRG00005008368)	SMPDL3B (ENSCDRG00005008566)
Suina	ANCESTRAL SPECIES	10	ENSGT00950000182802.B.a.b	ENSGT00940000159314	ENSGT00940000155194	ENSGT00390000013174	ENSGT00940000156585	ENSGT01090000260040.b.b.b.a	ENSGT00950000183172.B	ENSGT00390000004191	ENSGT00390000015719.c	ENSGT00940000155361	ENSGT00390000016565	ENSGT00900000143263	ENSGT00390000017418	ENSGT00940000160747 #19	ENSGT00940000156338 #21	ENSGT00950000182900.B #22	ENSGT00390000007371 #23	ENSGT00940000160932 #24	ENSGT00940000159398 #25	ENSGT00530000063929.a.b #26	ENSGT01060000248564.b.a.a.a #27	ENSGT00950000182962.b.a #28	ENSGT00940000157554 #30	ENSGT00940000163178	ENSGT00940000160073 #32	ENSGT01000000214440.A.a.b.a #33	ENSGT00940000156115 #34	ENSGT00530000063770.c.a	ENSGT00390000010045	ENSGT00950000183182.a.a	ENSGT01090000260093.b
Pig	MODERN SPECIES	14	HMGN2 (ENSSSCG00000003555)	RPS6KA1 (ENSSSCG00000003558)	ARID1A (ENSSSCG00000003559)	PIGV (ENSSSCG00000040007)	ZDHHC18 (ENSSSCG00000003561)	SFN (ENSSSCG00000062214)	GPN2 (ENSSSCG00000053928)	GPATCH3 (ENSSSCG00000003564)	NR0B2 (ENSSSCG00000003565)	NUDC (ENSSSCG00000003566)	KDF1 (ENSSSCG00000003567)	ENSSSCG00000040871	TRNP1 (ENSSSCG00000027325)	TENT5B (ENSSSCG00000036755) #19	SLC9A1 (ENSSSCG00000003569) #21	WDTC1 (ENSSSCG00000003570) #22	TMEM222 (ENSSSCG00000023636) #23	SYTL1 (ENSSSCG00000003572) #24	MAP3K6 (ENSSSCG00000003573) #25	CD164L2 (ENSSSCG00000056742) #26	GPR3 (ENSSSCG00000003576) #27	WASF2 (ENSSSCG00000003577) #28	FGR (ENSSSCG00000003578) #30	IFI6 (ENSSSCG00000034570)	FAM76A (ENSSSCG00000027894) #32	STX12 (ENSSSCG00000024927) #33	PPP1R8 (ENSSSCG00000021634) #34	ENSSSCG00000062637	THEMIS2 (ENSSSCG00000003584)	RPA2 (ENSSSCG00000003583)	SMPDL3B (ENSSSCG00000003582)
Chacoan peccary	MODERN SPECIES	808	ENSCWAG00000008110	RPS6KA1 (ENSCWAG00000008242)	ARID1A (ENSCWAG00000008742)	PIGV (ENSCWAG00000008817)	ZDHHC18 (ENSCWAG00000008839)	SFN (ENSCWAG00000008920)	GPN2 (ENSCWAG00000008935)	GPATCH3 (ENSCWAG00000008977)	NR0B2 (ENSCWAG00000009057)	NUDC (ENSCWAG00000009088)	KDF1 (ENSCWAG00000009120)	ENSCWAG00000009142	TRNP1 (ENSCWAG00000009155)	TENT5B (ENSCWAG00000009173) #19	SLC9A1 (ENSCWAG00000009212) #21	WDTC1 (ENSCWAG00000009263) #22	TMEM222 (ENSCWAG00000009376) #23	SYTL1 (ENSCWAG00000009431) #24	MAP3K6 (ENSCWAG00000009864) #25	CD164L2 (ENSCWAG00000010319) #26	GPR3 (ENSCWAG00000010389) #27	WASF2 (ENSCWAG00000010410) #28	FGR (ENSCWAG00000010497) #30	IFI6 (ENSCWAG00000010588)	FAM76A (ENSCWAG00000010629) #32	STX12 (ENSCWAG00000010733) #33	PPP1R8 (ENSCWAG00000010777) #34	ENSCWAG00000010859	RPA2 (ENSCWAG00000010943)	SMPDL3B (ENSCWAG00000011003)	XKR8 (ENSCWAG00000011141)
Atlantogenata	ANCESTRAL SPECIES	4	ENSGT00940000153295.a	ENSGT00390000007879	ENSGT00940000159314	ENSGT00940000155194	ENSGT00390000013174	ENSGT00940000156585	ENSGT01090000260040.b.b.b.a	ENSGT00950000183172.B	ENSGT00390000004191	ENSGT00390000015719.c	ENSGT00940000155361	ENSGT00390000016565	ENSGT00390000017418	ENSGT00940000160747 #19	ENSGT00940000156338 #21	ENSGT00950000182900.B #22	ENSGT00390000007371 #23	ENSGT00940000160932 #24	ENSGT00940000159398 #25	ENSGT00940000163188	ENSGT00530000063929.a.b #26	ENSGT01060000248564.b.a.a.a #27	ENSGT00950000182962.b.a #28	ENSGT00390000018883 #29	ENSGT00940000157554 #30	ENSGT00940000163178	ENSGT00940000160073 #32	ENSGT01000000214440.A.a.b.a #33	ENSGT00940000156115 #34	ENSGT00530000063770.c.a	ENSGT00390000010045
Xenarthra	ANCESTRAL SPECIES	38																ENSGT00950000182900.B #22	ENSGT00390000007371 #23	ENSGT00940000160932 #24	ENSGT00940000159398 #25	ENSGT00940000163188	ENSGT00530000063929.a.b #26	ENSGT01060000248564.b.a.a.a #27	ENSGT00950000182962.b.a #28	ENSGT00390000018883 #29	ENSGT00940000157554 #30	ENSGT00940000160073 #32	ENSGT01000000214440.A.a.b.a #33	ENSGT00940000156115 #34	ENSGT00530000063770.c.a	ENSGT00390000010045	ENSGT00950000183182.a.a
Armadillo	MODERN SPECIES	1291																WDTC1 (ENSDNOG00000001232) #22	TMEM222 (ENSDNOG00000043003) #23	SYTL1 (ENSDNOG00000009697) #24	MAP3K6 (ENSDNOG00000009722) #25	FCN3 (ENSDNOG00000031654)	CD164L2 (ENSDNOG00000039635) #26	GPR3 (ENSDNOG00000024172) #27	WASF2 (ENSDNOG00000034536) #28	AHDC1 (ENSDNOG00000038844) #29	FGR (ENSDNOG00000014797) #30	ENSDNOG00000034433	FAM76A (ENSDNOG00000049213) #32	STX12 (ENSDNOG00000049359) #33	PPP1R8 (ENSDNOG00000033057) #34	THEMIS2 (ENSDNOG00000013968)	RPA2 (ENSDNOG00000023660)
Afrotheria	ANCESTRAL SPECIES	15	ENSGT00390000007879	ENSGT00950000182802.B.a.a.a.b.a.a	ENSGT00940000159314	ENSGT00940000155194	ENSGT00390000013174	ENSGT00940000156585	ENSGT01090000260040.b.b.b.a	ENSGT00950000183172.B	ENSGT00390000004191	ENSGT00390000015719.c	ENSGT00940000155361	ENSGT00390000016565	ENSGT00390000017418	ENSGT00940000160747 #19	ENSGT00940000156338 #21	ENSGT00950000182900.B #22	ENSGT00390000007371 #23	ENSGT00940000160932 #24	ENSGT00940000159398 #25	ENSGT00940000163188	ENSGT00530000063929.a.b #26	ENSGT01060000248564.b.a.a.a #27	ENSGT00950000182962.b.a #28	ENSGT00390000018883 #29	ENSGT00940000157554 #30	ENSGT00940000163178	ENSGT00940000160073 #32	ENSGT01000000214440.A.a.b.a #33	ENSGT00940000156115 #34	ENSGT00530000063770.c.a	ENSGT00390000010045
Afrotheria_a	ANCESTRAL SPECIES	15	ENSGT00940000153295.a	ENSGT00390000007879	ENSGT00940000159314	ENSGT00940000155194	ENSGT00390000013174	ENSGT00940000156585	ENSGT01090000260040.b.b.b.a	ENSGT00950000183172.B	ENSGT00390000004191	ENSGT00390000015719.c	ENSGT00940000155361	ENSGT00390000016565	ENSGT00390000017418	ENSGT00940000160747 #19	ENSGT00940000156338 #21	ENSGT00950000182900.B #22	ENSGT00390000007371 #23	ENSGT00940000160932 #24	ENSGT00940000159398 #25	ENSGT00940000163188	ENSGT00530000063929.a.b #26	ENSGT01060000248564.b.a.a.a #27	ENSGT00950000182962.b.a #28	ENSGT00390000018883 #29	ENSGT00940000157554 #30	ENSGT00940000163178	ENSGT00940000160073 #32	ENSGT01000000214440.A.a.b.a #33	ENSGT00940000156115 #34	ENSGT00530000063770.c.a	ENSGT00390000010045
Elephant	MODERN SPECIES	332	ZNF683 (ENSLAFG00000001781)	LIN28A (ENSLAFG00000017525)	DHDDS (ENSLAFG00000017527)	RPS6KA1 (ENSLAFG00000004940)	ARID1A (ENSLAFG00000017591)	PIGV (ENSLAFG00000016679)	ZDHHC18 (ENSLAFG00000016682)	SFN (ENSLAFG00000007721)	GPN2 (ENSLAFG00000021641)	GPATCH3 (ENSLAFG00000016691)	NR0B2 (ENSLAFG00000016698)	NUDC (ENSLAFG00000027857)	KDF1 (ENSLAFG00000016045)	TENT5B (ENSLAFG00000023075) #19	SLC9A1 (ENSLAFG00000011339) #21	WDTC1 (ENSLAFG00000006032) #22	TMEM222 (ENSLAFG00000006037) #23	SYTL1 (ENSLAFG00000006041) #24	MAP3K6 (ENSLAFG00000006042) #25	CD164L2 (ENSLAFG00000026681) #26	GPR3 (ENSLAFG00000010606) #27	WASF2 (ENSLAFG00000006048) #28	AHDC1 (ENSLAFG00000030861) #29	FGR (ENSLAFG00000011018) #30	ENSLAFG00000022930	ENSLAFG00000023210	FAM76A (ENSLAFG00000017824) #32	STX12 (ENSLAFG00000017828) #33	PPP1R8 (ENSLAFG00000017834) #34	THEMIS2 (ENSLAFG00000009492)	RPA2 (ENSLAFG00000014387)
Hyrax	MODERN SPECIES	3162																WDTC1 (ENSPCAG00000007569) #22	TMEM222 (ENSPCAG00000007630) #23	SYTL1 (ENSPCAG00000007678) #24	MAP3K6 (ENSPCAG00000007766) #25	FCN3 (ENSPCAG00000007941)	CD164L2 (ENSPCAG00000008031) #26
Tenrec	MODERN SPECIES	3841																ENSETEG00000016414 #22	SYTL1 (ENSETEG00000016418) #24	MAP3K6 (ENSETEG00000016421) #25	GPR3 (ENSETEG00000016428) #27	ENSETEG00000016430 #28
Marsupialia	ANCESTRAL SPECIES	10	ENSGT00390000007879	ENSGT00950000182802.B.a.a	ENSGT00940000159314	ENSGT00940000155194	ENSGT00390000013174	ENSGT00940000156585	ENSGT01090000260040.b.b.b.a	ENSGT00950000183172.B	ENSGT00390000004191	ENSGT00390000015719.c	ENSGT00940000155361	ENSGT00390000016565	ENSGT00390000017418	ENSGT00940000160747 #19	ENSGT00940000156338 #21	ENSGT00950000182900.B #22	ENSGT00390000007371 #23	ENSGT00940000160932 #24	ENSGT00940000159398 #25	ENSGT00940000163188	ENSGT00530000063929.a.b #26	ENSGT01060000248564.b.a.a.a #27	ENSGT00950000182962.b.a #28	ENSGT00390000018883 #29	ENSGT00940000157554 #30	ENSGT00940000160073 #32	ENSGT01000000214440.A.a.b.a #33	ENSGT00940000156115 #34	ENSGT00530000063770.c.a	ENSGT00390000010045	ENSGT00950000183182.a.a
Marsupialia_b	ANCESTRAL SPECIES	4	ENSGT00390000007879	ENSGT00950000182802.B.a.a	ENSGT00940000159314	ENSGT00940000155194	ENSGT00390000013174	ENSGT00940000156585	ENSGT01090000260040.b.b.b.a	ENSGT00950000183172.B	ENSGT00390000004191	ENSGT00390000015719.c	ENSGT00940000155361	ENSGT00390000016565	ENSGT00390000017418	ENSGT00940000160747 #19	ENSGT00940000156338 #21	ENSGT00950000182900.B #22	ENSGT00390000007371 #23	ENSGT00940000160932 #24	ENSGT00940000159398 #25	ENSGT00940000163188	ENSGT00530000063929.a.b #26	ENSGT01060000248564.b.a.a.a #27	ENSGT00950000182962.b.a #28	ENSGT00390000018883 #29	ENSGT00940000157554 #30	ENSGT00940000160073 #32	ENSGT01000000214440.A.a.b.a #33	ENSGT00940000156115 #34	ENSGT00530000063770.c.a	ENSGT00390000010045	ENSGT00950000183182.a.a
Diprotodontia	ANCESTRAL SPECIES	3	ENSGT00390000007879	ENSGT00950000182802.B.a.a	ENSGT00940000159314	ENSGT00940000155194	ENSGT00390000013174	ENSGT00940000156585	ENSGT01090000260040.b.b.b.a	ENSGT00950000183172.B	ENSGT00390000004191	ENSGT00390000015719.c	ENSGT00940000155361	ENSGT00390000016565	ENSGT00390000017418	ENSGT00940000160747 #19	ENSGT00940000156338 #21	ENSGT00950000182900.B #22	ENSGT00390000007371 #23	ENSGT00940000160932 #24	ENSGT00940000159398 #25	ENSGT00940000163188	ENSGT00530000063929.a.b #26	ENSGT01060000248564.b.a.a.a #27	ENSGT00950000182962.b.a #28	ENSGT00390000018883 #29	ENSGT00940000157554 #30	ENSGT00940000160073 #32	ENSGT01000000214440.A.a.b.a #33	ENSGT00940000156115 #34	ENSGT00530000063770.c.a	ENSGT00390000010045	ENSGT00950000183182.a.a
Diprotodontia_a	ANCESTRAL SPECIES	4	ENSGT00390000007879	ENSGT00950000182802.B.a.a.d	ENSGT00940000159314	ENSGT00940000155194	ENSGT00390000013174	ENSGT00940000156585	ENSGT01090000260040.b.b.b.a	ENSGT00950000183172.B	ENSGT00390000004191	ENSGT00390000015719.c	ENSGT00940000155361	ENSGT00390000016565	ENSGT00390000017418	ENSGT00940000160747 #19	ENSGT00940000156338 #21	ENSGT00950000182900.B #22	ENSGT00390000007371 #23	ENSGT00940000160932 #24	ENSGT00940000159398 #25	ENSGT00940000163188	ENSGT00530000063929.a.b #26	ENSGT01060000248564.b.a.a.a #27	ENSGT00950000182962.b.a #28	ENSGT00390000018883 #29	ENSGT00940000157554 #30	ENSGT00940000160073 #32	ENSGT01000000214440.A.a.b.a #33	ENSGT00940000156115 #34	ENSGT00530000063770.c.a	ENSGT00390000010045	ENSGT00950000183182.a.a
koala	MODERN SPECIES	14	DHDDS (ENSPCIG00000012690)	RPS6KA1 (ENSPCIG00000012689)	ARID1A (ENSPCIG00000012686)	PIGV (ENSPCIG00000012685)	ZDHHC18 (ENSPCIG00000012684)	SFN (ENSPCIG00000012683)	GPN2 (ENSPCIG00000012682)	GPATCH3 (ENSPCIG00000012681)	ENSPCIG00000033728	NR0B2 (ENSPCIG00000012680)	NUDC (ENSPCIG00000012676)	KDF1 (ENSPCIG00000012674)	TRNP1 (ENSPCIG00000012669)	TENT5B (ENSPCIG00000031333) #19	SLC9A1 (ENSPCIG00000012661) #21	WDTC1 (ENSPCIG00000024839) #22	TMEM222 (ENSPCIG00000024842) #23	SYTL1 (ENSPCIG00000024846) #24	MAP3K6 (ENSPCIG00000024851) #25	ENSPCIG00000034177	CD164L2 (ENSPCIG00000024856) #26	GPR3 (ENSPCIG00000024859) #27	WASF2 (ENSPCIG00000034938) #28	AHDC1 (ENSPCIG00000009216) #29	FGR (ENSPCIG00000000551) #30	FAM76A (ENSPCIG00000022294) #32	STX12 (ENSPCIG00000022297) #33	PPP1R8 (ENSPCIG00000036471) #34	THEMIS2 (ENSPCIG00000022310)	RPA2 (ENSPCIG00000022320)	SMPDL3B (ENSPCIG00000022329)
Common wonbat	MODERN SPECIES	1016	LIN28A (ENSVURG00010006813)	DHDDS (ENSVURG00010006827)	ENSVURG00010006862	RPS6KA1 (ENSVURG00010006878)	ARID1A (ENSVURG00010006923)	PIGV (ENSVURG00010006946)	ZDHHC18 (ENSVURG00010006957)	SFN (ENSVURG00010006971)	GPN2 (ENSVURG00010006977)	GPATCH3 (ENSVURG00010006982)	NR0B2 (ENSVURG00010006991)	ENSVURG00010006997	ENSVURG00010007001	TENT5B (ENSVURG00010007003) #19	SLC9A1 (ENSVURG00010007010) #21	WDTC1 (ENSVURG00010007025) #22	TMEM222 (ENSVURG00010007064) #23	SYTL1 (ENSVURG00010007100) #24	MAP3K6 (ENSVURG00010007128) #25	FCN3 (ENSVURG00010007261)	CD164L2 (ENSVURG00010007273) #26	WASF2 (ENSVURG00010007302) #28	ENSVURG00010007319 #30	ENSVURG00010007340 #32	ENSVURG00010007383 #33	ENSVURG00010007390 #34	ENSVURG00010007404	ENSVURG00010007408	ENSVURG00010007415	ENSVURG00010007425	ENSVURG00010007451
Wallaby	MODERN SPECIES	4996																ENSMEUG00000009344 #22
Tasmanian devil	MODERN SPECIES	2	DHDDS (ENSSHAG00000026135)	ENSSHAG00000012391	ARID1A (ENSSHAG00000013363)	PIGV (ENSSHAG00000013863)	ZDHHC18 (ENSSHAG00000031107)	SFN (ENSSHAG00000024644)	GPN2 (ENSSHAG00000027495)	GPATCH3 (ENSSHAG00000026633)	NR0B2 (ENSSHAG00000014359)	NUDC (ENSSHAG00000003633)	ENSSHAG00000029984	KDF1 (ENSSHAG00000032177)	TRNP1 (ENSSHAG00000029647)	TENT5B (ENSSHAG00000026408) #19	SLC9A1 (ENSSHAG00000021244) #21	WDTC1 (ENSSHAG00000001544) #22	TMEM222 (ENSSHAG00000025224) #23	SYTL1 (ENSSHAG00000021748) #24	CD164L2 (ENSSHAG00000003127) #26	GPR3 (ENSSHAG00000032210) #27	WASF2 (ENSSHAG00000004886) #28	FGR (ENSSHAG00000001546) #30	FAM76A (ENSSHAG00000022341) #32	PPP1R8 (ENSSHAG00000024313) #34	THEMIS2 (ENSSHAG00000015133)	RPA2 (ENSSHAG00000015255)	SMPDL3B (ENSSHAG00000015331)	XKR8 (ENSSHAG00000026927)	EYA3 (ENSSHAG00000027000)	ENSSHAG00000029212	PTAFR (ENSSHAG00000026787)
Opossum	MODERN SPECIES	3	DHDDS (ENSMODG00000014246)	ENSMODG00000041565	ENSMODG00000050678	RPS6KA1 (ENSMODG00000014283)	ARID1A (ENSMODG00000014380)	PIGV (ENSMODG00000014399)	ZDHHC18 (ENSMODG00000014406)	SFN (ENSMODG00000023920)	GPN2 (ENSMODG00000042945)	GPATCH3 (ENSMODG00000014417)	NR0B2 (ENSMODG00000014420)	ENSMODG00000014391	KDF1 (ENSMODG00000014422)	TENT5B (ENSMODG00000014427) #19	ENSMODG00000014436 #21	WDTC1 (ENSMODG00000014445) #22	TMEM222 (ENSMODG00000044127) #23	ENSMODG00000014461	MAP3K6 (ENSMODG00000014479) #25	ENSMODG00000043200	ENSMODG00000014488	GPR3 (ENSMODG00000014490) #27	WASF2 (ENSMODG00000014503) #28	ENSMODG00000010745	MFN2 (ENSMODG00000010801)	PLOD1 (ENSMODG00000010880)	KIAA2013 (ENSMODG00000010897)	ENSMODG00000010906	NPPA (ENSMODG00000010914)	CLCN6 (ENSMODG00000010962)	MTHFR (ENSMODG00000010976)
Platypus	MODERN SPECIES	7	LIN28A (ENSOANG00000044192)	ENSOANG00000006912	ENSOANG00000008337	RPS6KA1 (ENSOANG00000015078)	ARID1A (ENSOANG00000041657)	PIGV (ENSOANG00000040532)	ZDHHC18 (ENSOANG00000050720)	SFN (ENSOANG00000006084)	GPN2 (ENSOANG00000048781)	GPATCH3 (ENSOANG00000039186)	NR0B2 (ENSOANG00000006533)	NUDC (ENSOANG00000037443)	KDF1 (ENSOANG00000043515)	SLC9A1 (ENSOANG00000002338) #21	TENT5B (ENSOANG00000036422) #19	WDTC1 (ENSOANG00000046790) #22	ENSOANG00000048882 #23	SYTL1 (ENSOANG00000046382) #24	MAP3K6 (ENSOANG00000040771) #25	ENSOANG00000035989 #26	GPR3 (ENSOANG00000002859) #27	WASF2 (ENSOANG00000042525) #28	AHDC1 (ENSOANG00000048348) #29	FGR (ENSOANG00000010074) #30	ENSOANG00000040112	ENSOANG00000045139	FAM76A (ENSOANG00000039444) #32	STX12 (ENSOANG00000008316) #33	PPP1R8 (ENSOANG00000008315) #34	ENSOANG00000037115	ENSOANG00000000149
Sauria	ANCESTRAL SPECIES	23	ENSGT00390000007879	ENSGT00950000182802.B	ENSGT00940000159314	ENSGT00940000155194	ENSGT00390000013174	ENSGT00940000156585	ENSGT01090000260040.b.b.b.a	ENSGT00950000183172.B	ENSGT00390000004191	ENSGT00390000015719.c	ENSGT00940000155361	ENSGT00390000016565	ENSGT00390000017418	ENSGT00940000160747 #19	ENSGT00940000156338 #21	ENSGT00950000182900.B #22	ENSGT00390000007371 #23	ENSGT00940000154868.a.b	ENSGT00940000160932 #24	ENSGT00940000159398 #25	ENSGT00940000157531	ENSGT00530000063929.a.b #26	ENSGT01060000248564.b.a.a.a #27	ENSGT00950000182962.b.a #28	ENSGT00390000018883 #29	ENSGT00940000157554 #30	ENSGT00940000163923.f	ENSGT00940000163923.e	ENSGT00940000160073 #32	ENSGT00950000183168.B.a	ENSGT00390000003312
Lepidosauria	ANCESTRAL SPECIES	18	ENSGT00390000007879	ENSGT00950000182802.B	ENSGT00940000159314	ENSGT00940000155194	ENSGT00390000013174	ENSGT00940000156585	ENSGT01090000260040.b.b.b.a	ENSGT00950000183172.B	ENSGT00390000004191	ENSGT00390000015719.c	ENSGT00940000155361	ENSGT00390000016565	ENSGT00390000017418	ENSGT00940000160747 #19	ENSGT00940000156338 #21	ENSGT00950000182900.B #22	ENSGT00390000007371 #23	ENSGT00940000154868.a.b	ENSGT00940000160932 #24	ENSGT00940000159398 #25	ENSGT00940000157531	ENSGT00530000063929.a.b #26	ENSGT01060000248564.b.a.a.a #27	ENSGT00950000182962.b.a #28	ENSGT00390000018883 #29	ENSGT00940000157554 #30	ENSGT00940000163923.f	ENSGT00940000163923.e	ENSGT00940000163282.k.a	ENSGT00940000160073 #32	ENSGT00950000183168.B.a
Episquamata	ANCESTRAL SPECIES	7	ENSGT00950000182802.B	ENSGT00940000159314	ENSGT00940000155194	ENSGT00390000013174	ENSGT00940000156585	ENSGT01090000260040.b.b.b.a	ENSGT00950000183172.B	ENSGT00390000004191	ENSGT00390000015719.c	ENSGT00940000155361	ENSGT00390000016565	ENSGT00390000017418	ENSGT00940000156317.l	ENSGT00940000160747 #19	ENSGT00940000156338 #21	ENSGT00950000182900.B #22	ENSGT00390000007371 #23	ENSGT00940000154868.a.b	ENSGT00940000160932 #24	ENSGT00940000159398 #25	ENSGT00940000157531	ENSGT00530000063929.a.b #26	ENSGT01060000248564.b.a.a.a #27	ENSGT00950000182962.b.a #28	ENSGT00390000018883 #29	ENSGT00940000157554 #30	ENSGT00940000163923.f	ENSGT00940000163923.e	ENSGT00940000163282.k.a	ENSGT00940000160073 #32	ENSGT00950000183168.B.a
Laterata	ANCESTRAL SPECIES	27	ENSGT00950000182802.B	ENSGT00940000159314	ENSGT00940000155194	ENSGT00390000013174	ENSGT00940000156585	ENSGT01090000260040.b.b.b.a	ENSGT00950000183172.B	ENSGT00390000004191	ENSGT00390000015719.c	ENSGT00940000155361	ENSGT00390000016565	ENSGT00390000017418	ENSGT00940000156317.l	ENSGT00940000160747 #19	ENSGT00940000156338 #21	ENSGT00950000182900.B #22	ENSGT00390000007371 #23	ENSGT00940000154868.a.b	ENSGT00940000160932 #24	ENSGT00940000159398 #25	ENSGT00940000157531	ENSGT00530000063929.a.b #26	ENSGT01060000248564.b.a.a.a #27	ENSGT00950000182962.b.a #28	ENSGT00390000018883 #29	ENSGT00940000163923.f	ENSGT00940000163923.e	ENSGT00940000163282.k.a	ENSGT00940000160073 #32	ENSGT00950000183168.B.a	ENSGT00390000003312
Common wall lizard	MODERN SPECIES	16	PIGV (ENSPMRG00000009388)	ZDHHC18 (ENSPMRG00000009385)	SFN (ENSPMRG00000009382)	GPN2 (ENSPMRG00000009374)	GPATCH3 (ENSPMRG00000009368)	NR0B2 (ENSPMRG00000009366)	NUDC (ENSPMRG00000009361)	KDF1 (ENSPMRG00000009359)	TRNP1 (ENSPMRG00000009354)	ENSPMRG00000009308	ENSPMRG00000009292	ENSPMRG00000009288	TENT5B (ENSPMRG00000009285) #19	ENSPMRG00000009280	SLC9A1 (ENSPMRG00000009269) #21	WDTC1 (ENSPMRG00000009261) #22	ENSPMRG00000009256	ENSPMRG00000009250	ENSPMRG00000009244	TMEM222 (ENSPMRG00000009236) #23	PHACTR4 (ENSPMRG00000009195)	MED18 (ENSPMRG00000009177)	SESN2 (ENSPMRG00000009161)	FAM76A (ENSPMRG00000009135) #32	ENSPMRG00000009120	ENSPMRG00000009115	ENSPMRG00000009104	ENSPMRG00000009089	ENSPMRG00000009078	AHDC1 (ENSPMRG00000009067) #29	WASF2 (ENSPMRG00000009056) #28
Argentine black and white tegu	MODERN SPECIES	53	ENSSMRG00000002307	RPS6KA1 (ENSSMRG00000002310)	ARID1A (ENSSMRG00000002346)	PIGV (ENSSMRG00000002359)	ZDHHC18 (ENSSMRG00000002363)	SFN (ENSSMRG00000002368)	GPN2 (ENSSMRG00000002376)	GPATCH3 (ENSSMRG00000002378)	NR0B2 (ENSSMRG00000002381)	NUDC (ENSSMRG00000002382)	KDF1 (ENSSMRG00000002384)	TRNP1 (ENSSMRG00000002385)	ENSSMRG00000002398	TENT5B (ENSSMRG00000002406) #19	SLC9A1 (ENSSMRG00000002417) #21	WDTC1 (ENSSMRG00000002425) #22	TMEM222 (ENSSMRG00000002433) #23	ENSSMRG00000002449	SYTL1 (ENSSMRG00000002437) #24	MAP3K6 (ENSSMRG00000002451) #25	ENSSMRG00000002456	CD164L2 (ENSSMRG00000002466) #26	GPR3 (ENSSMRG00000002473) #27	WASF2 (ENSSMRG00000002478) #28	AHDC1 (ENSSMRG00000002496) #29	ENSSMRG00000002513	ENSSMRG00000002524	ENSSMRG00000002537	ENSSMRG00000002539	FAM76A (ENSSMRG00000002548) #32	SESN2 (ENSSMRG00000002553)
Toxicofera	ANCESTRAL SPECIES	24	ENSGT00950000182802.B	ENSGT00940000159314	ENSGT00940000155194	ENSGT00390000013174	ENSGT00940000156585	ENSGT01090000260040.b.b.b.a	ENSGT00950000183172.B.j	ENSGT00390000004191	ENSGT00390000015719.c	ENSGT00940000155361	ENSGT00390000016565	ENSGT00390000017418	ENSGT00940000156317.l	ENSGT00940000160747 #19	ENSGT00940000156338 #21	ENSGT00950000182900.B #22	ENSGT00390000007371 #23	ENSGT00940000154868.a.b	ENSGT00940000160932 #24	ENSGT00940000159398 #25	ENSGT00530000063929.a.b #26	ENSGT01060000248564.b.a.a.a #27	ENSGT00950000182962.b.a #28	ENSGT00390000018883 #29	ENSGT00940000157554 #30	ENSGT00940000163923.f	ENSGT00940000163923.e	ENSGT00940000160073 #32	ENSGT00950000183168.B.a	ENSGT00390000003312	ENSGT00940000157582
Elapidae	ANCESTRAL SPECIES	9	ENSGT00950000182802.B	ENSGT00940000159314	ENSGT00940000155194	ENSGT00390000013174	ENSGT00940000156585	ENSGT01090000260040.b.b.b.a	ENSGT00950000183172.B.j	ENSGT00390000004191	ENSGT00390000015719.c	ENSGT00940000155361	ENSGT00390000016565	ENSGT00390000017418	ENSGT00940000156317.l	ENSGT00940000160747 #19	ENSGT00940000156338 #21	ENSGT00950000182900.B #22	ENSGT00390000007371 #23	ENSGT00940000154868.a.b	ENSGT00940000160932 #24	ENSGT00940000159398.g #25	ENSGT00530000063929.a.b #26	ENSGT01060000248564.b.a.a.a #27	ENSGT00950000182962.b.a #28	ENSGT00390000018883 #29	ENSGT00940000157554 #30	ENSGT00940000163923.f	ENSGT00940000163923.e	ENSGT00940000160073 #32	ENSGT00950000183168.B.a	ENSGT00390000003312	ENSGT00940000157582.a
Elapidae_a	ANCESTRAL SPECIES	15	ENSGT00950000182802.B	ENSGT00940000159314.c	ENSGT00940000155194	ENSGT00390000013174	ENSGT00940000156585	ENSGT01090000260040.b.b.b.a	ENSGT00950000183172.B.j	ENSGT00390000004191	ENSGT00390000015719.c	ENSGT00940000155361	ENSGT00390000016565	ENSGT00390000017418	ENSGT00940000156317.l	ENSGT00940000160747 #19	ENSGT00940000156338 #21	ENSGT00950000182900.B #22	ENSGT00390000007371 #23	ENSGT00940000154868.a.b	ENSGT00940000160932 #24	ENSGT00940000159398.g #25	ENSGT00960000189365	ENSGT01060000248564.b.a.a.a #27	ENSGT00950000182962.b.a #28	ENSGT00390000018883 #29	ENSGT00940000157554 #30	ENSGT00940000163923.f	ENSGT00940000163923.e	ENSGT00940000160073 #32	ENSGT00950000183168.B.a	ENSGT00390000003312	ENSGT00940000157582.a
Acanthophiinae	ANCESTRAL SPECIES	22	ENSGT00950000182802.B	ENSGT00940000159314.c	ENSGT00940000155194	ENSGT00390000013174	ENSGT00940000156585	ENSGT01090000260040.b.b.b.a	ENSGT00950000183172.B.j	ENSGT00390000004191	ENSGT00390000015719.c	ENSGT00940000155361	ENSGT00390000016565	ENSGT00390000017418	ENSGT00940000156317.l	ENSGT00940000160747 #19	ENSGT00940000156338 #21	ENSGT00950000182900.B #22	ENSGT00390000007371 #23	ENSGT00940000154868.a.b	ENSGT00940000160932 #24	ENSGT00940000159398.g #25	ENSGT00960000189365	ENSGT01060000248564.b.a.a.a #27	ENSGT00950000182962.b.a #28	ENSGT00390000018883 #29	ENSGT00940000157554 #30	ENSGT00940000163923.f	ENSGT00940000163923.e	ENSGT00940000160073 #32	ENSGT00950000183168.B.a	ENSGT00390000003312	ENSGT00940000157582.a
Mainland tiger snake	MODERN SPECIES	80	ENSNSUG00000013849	RPS6KA1 (ENSNSUG00000013850)	ARID1A (ENSNSUG00000013851)	PIGV (ENSNSUG00000013856)	ZDHHC18 (ENSNSUG00000013857)	SFN (ENSNSUG00000013858)	GPN2 (ENSNSUG00000013859)	GPATCH3 (ENSNSUG00000013860)	NR0B2 (ENSNSUG00000013861)	NUDC (ENSNSUG00000013862)	KDF1 (ENSNSUG00000013887)	TRNP1 (ENSNSUG00000013889)	ENSNSUG00000013891	TENT5B (ENSNSUG00000013892) #19	SLC9A1 (ENSNSUG00000013894) #21	WDTC1 (ENSNSUG00000013895) #22	TMEM222 (ENSNSUG00000013896) #23	ENSNSUG00000013897	SYTL1 (ENSNSUG00000013898) #24	ENSNSUG00000013899 #25	GPR3 (ENSNSUG00000013900) #27	WASF2 (ENSNSUG00000013901) #28	AHDC1 (ENSNSUG00000013903) #29	ENSNSUG00000013905	ENSNSUG00000013906	ENSNSUG00000013907	FAM76A (ENSNSUG00000013908) #32	MED18 (ENSNSUG00000013910)	ENSNSUG00000013911	ENSNSUG00000013912	RCC1 (ENSNSUG00000013917)
Eastern brown snake	MODERN SPECIES	19	DHDDS (ENSPTXG00000005509)	ENSPTXG00000005508	RPS6KA1 (ENSPTXG00000005507)	ARID1A (ENSPTXG00000005506)	PIGV (ENSPTXG00000005505)	ZDHHC18 (ENSPTXG00000005504)	SFN (ENSPTXG00000005503)	GPN2 (ENSPTXG00000005502)	GPATCH3 (ENSPTXG00000005501)	NR0B2 (ENSPTXG00000005500)	NUDC (ENSPTXG00000005499)	KDF1 (ENSPTXG00000005497)	ENSPTXG00000005496	TENT5B (ENSPTXG00000005495) #19	SLC9A1 (ENSPTXG00000005493) #21	WDTC1 (ENSPTXG00000005491) #22	TMEM222 (ENSPTXG00000005490) #23	ENSPTXG00000005488	SYTL1 (ENSPTXG00000005487) #24	MAP3K6 (ENSPTXG00000005442) #25	ENSPTXG00000005429	GPR3 (ENSPTXG00000005428) #27	WASF2 (ENSPTXG00000005425) #28	AHDC1 (ENSPTXG00000005424) #29	FGR (ENSPTXG00000005421) #30	ENSPTXG00000005419	ENSPTXG00000005416	FAM76A (ENSPTXG00000005413) #32	SESN2 (ENSPTXG00000005410)	MED18 (ENSPTXG00000005408)	PHACTR4 (ENSPTXG00000005405)
Blue-lipped sea krait	MODERN SPECIES	3360																WDTC1 (ENSLLTG00000016856) #22	ENSLLTG00000016861
Indian cobra	MODERN SPECIES	11	DHDDS (ENSNNAG00000008433)	ENSNNAG00000008462	RPS6KA1 (ENSNNAG00000008494)	ARID1A (ENSNNAG00000008781)	PIGV (ENSNNAG00000008829)	ZDHHC18 (ENSNNAG00000008874)	SFN (ENSNNAG00000009004)	GPATCH3 (ENSNNAG00000009029)	NR0B2 (ENSNNAG00000009091)	NUDC (ENSNNAG00000009135)	KDF1 (ENSNNAG00000009182)	TRNP1 (ENSNNAG00000009209)	ENSNNAG00000009226	TENT5B (ENSNNAG00000003536) #19	SLC9A1 (ENSNNAG00000003600) #21	WDTC1 (ENSNNAG00000003635) #22	TMEM222 (ENSNNAG00000003679) #23	ENSNNAG00000003700	SYTL1 (ENSNNAG00000003725) #24	MAP3K6 (ENSNNAG00000003752) #25	CD164L2 (ENSNNAG00000003877) #26	GPR3 (ENSNNAG00000003904) #27	WASF2 (ENSNNAG00000003926) #28	AHDC1 (ENSNNAG00000003964) #29	FGR (ENSNNAG00000004005) #30	ENSNNAG00000004086	ENSNNAG00000004121	FAM76A (ENSNNAG00000004205) #32	SESN2 (ENSNNAG00000004318)	PHACTR4 (ENSNNAG00000004401)	MED18 (ENSNNAG00000004457)
Lizard	MODERN SPECIES	1100	RPS6KA1 (ENSACAG00000016599)	ARID1A (ENSACAG00000016601)	PIGV (ENSACAG00000016638)	ZDHHC18 (ENSACAG00000016644)	SFN (ENSACAG00000016687)	GPN2 (ENSACAG00000016692)	ENSACAG00000045477	GPATCH3 (ENSACAG00000016709)	NR0B2 (ENSACAG00000040657)	ENSACAG00000016726	KDF1 (ENSACAG00000016745)	TRNP1 (ENSACAG00000042636)	ENSACAG00000016747	TENT5B (ENSACAG00000016761) #19	SLC9A1 (ENSACAG00000016767) #21	WDTC1 (ENSACAG00000003344) #22	ENSACAG00000039142	ENSACAG00000029174	AGO3 (ENSACAG00000003385)	TEKT2 (ENSACAG00000003567)	ADPRS (ENSACAG00000003611)	COL8A2 (ENSACAG00000003633)	ENSACAG00000036431
tuatara	MODERN SPECIES	531															SLC9A1 (ENSSPUG00000017949) #21	WDTC1 (ENSSPUG00000017937) #22	TMEM222 (ENSSPUG00000017932) #23	SYTL1 (ENSSPUG00000017914) #24	MAP3K6 (ENSSPUG00000017886) #25	ENSSPUG00000017873	GPR3 (ENSSPUG00000017868) #27	WASF2 (ENSSPUG00000017858) #28	AHDC1 (ENSSPUG00000017825) #29	FGR (ENSSPUG00000017811) #30	ENSSPUG00000017804	ENSSPUG00000017797	ENSSPUG00000017780	ENSSPUG00000017771	FAM76A (ENSSPUG00000017760) #32	SESN2 (ENSSPUG00000017749)	ENSSPUG00000017740
Archelosauria	ANCESTRAL SPECIES	25	ENSGT00390000007879	ENSGT00950000182802.B	ENSGT00940000159314	ENSGT00940000155194	ENSGT00390000013174	ENSGT00940000156585	ENSGT01090000260040.b.b.b.a	ENSGT00950000183172.B	ENSGT00390000004191	ENSGT00390000015719.c	ENSGT00940000155361	ENSGT00390000016565	ENSGT00390000017418	ENSGT00940000160747 #19	ENSGT00940000156338 #21	ENSGT00950000182900.B #22	ENSGT00390000007371 #23	ENSGT00940000154868.a.b	ENSGT00940000160932 #24	ENSGT00940000159398 #25	ENSGT00940000157531	ENSGT00530000063929.a.b #26	ENSGT01060000248564.b.a.a.a #27	ENSGT00950000182962.b.a #28	ENSGT00390000018883 #29	ENSGT00940000157554 #30	ENSGT00940000163923.f	ENSGT00940000163923.e	ENSGT00940000163282.j	ENSGT00940000161215.hc.b	ENSGT00940000160073 #32
Cryptodira	ANCESTRAL SPECIES	31	ENSGT00390000007879	ENSGT00950000182802.B	ENSGT00940000159314	ENSGT00940000155194	ENSGT00390000013174	ENSGT00940000156585	ENSGT01090000260040.b.b.b.a	ENSGT00950000183172.B	ENSGT00390000004191	ENSGT00390000015719.c	ENSGT00940000155361	ENSGT00390000016565	ENSGT00390000017418	ENSGT00940000160747 #19	ENSGT00940000156338 #21	ENSGT00950000182900.B #22	ENSGT00390000007371 #23	ENSGT00940000154868.a.b	ENSGT00940000160932 #24	ENSGT00940000159398 #25	ENSGT00940000157531.k	ENSGT00530000063929.a.b #26	ENSGT01060000248564.b.a.a.a #27	ENSGT00950000182962.b.a #28	ENSGT00390000018883 #29	ENSGT00940000157554 #30
Testudinoidea	ANCESTRAL SPECIES	27	ENSGT00390000007879	ENSGT00950000182802.B	ENSGT00940000159314	ENSGT00940000155194	ENSGT00390000013174	ENSGT00940000156585	ENSGT01090000260040.b.b.b.a	ENSGT00950000183172.B	ENSGT00390000004191	ENSGT00390000015719.c	ENSGT00940000155361	ENSGT00390000016565	ENSGT00390000017418	ENSGT00940000160747 #19	ENSGT00940000156338 #21	ENSGT00950000182900.B #22	ENSGT00390000007371 #23	ENSGT00940000154868.a.b	ENSGT00940000160932 #24	ENSGT00940000159398 #25	ENSGT00940000157531.k	ENSGT00530000063929.a.b #26	ENSGT01060000248564.b.a.a.a #27	ENSGT00950000182962.b.a #28	ENSGT00390000018883 #29	ENSGT00940000157554 #30
Emydidae	ANCESTRAL SPECIES	39	ENSGT00390000007879	ENSGT00950000182802.B	ENSGT00940000159314	ENSGT00940000155194	ENSGT00390000013174	ENSGT00940000156585	ENSGT01090000260040.b.b.b.a	ENSGT00950000183172.B	ENSGT00390000004191	ENSGT00390000015719.c	ENSGT00940000155361	ENSGT00390000016565	ENSGT00390000017418	ENSGT00940000160747 #19	ENSGT00940000156338 #21	ENSGT00950000182900.B #22	ENSGT00390000007371 #23	ENSGT00940000154868.a.b	ENSGT00940000160932 #24	ENSGT00940000159398 #25	ENSGT00940000157531.k	ENSGT00530000063929.a.b #26	ENSGT01060000248564.b.a.a.a #27	ENSGT00950000182962.b.a #28
Three-toed box turtle	MODERN SPECIES	111	ENSTMTG00000012122	RPS6KA1 (ENSTMTG00000010867)	ARID1A (ENSTMTG00000010637)	PIGV (ENSTMTG00000010620)	ZDHHC18 (ENSTMTG00000010602)	SFN (ENSTMTG00000010580)	ENSTMTG00000010529	GPN2 (ENSTMTG00000010508)	GPATCH3 (ENSTMTG00000010492)	NR0B2 (ENSTMTG00000010483)	NUDC (ENSTMTG00000010465)	KDF1 (ENSTMTG00000010454)	TRNP1 (ENSTMTG00000010438)	TENT5B (ENSTMTG00000010434) #19	SLC9A1 (ENSTMTG00000010422) #21	WDTC1 (ENSTMTG00000010408) #22	TMEM222 (ENSTMTG00000012958) #23	ENSTMTG00000012936	SYTL1 (ENSTMTG00000012905) #24	MAP3K6 (ENSTMTG00000012859) #25	ENSTMTG00000012835	CD164L2 (ENSTMTG00000012818) #26	GPR3 (ENSTMTG00000012809) #27	WASF2 (ENSTMTG00000012789) #28	ENSTMTG00000012779	AHDC1 (ENSTMTG00000012770) #29	ENSTMTG00000012746	ENSTMTG00000012717	ENSTMTG00000012703	ENSTMTG00000012689	ENSTMTG00000012680
painted turtle	MODERN SPECIES	757	ENSCPBG00000025004	RPS6KA1 (ENSCPBG00000024989)	ARID1A (ENSCPBG00000024979)	PIGV (ENSCPBG00000024976)	ZDHHC18 (ENSCPBG00000024975)	SFN (ENSCPBG00000024974)	ENSCPBG00000024973	GPN2 (ENSCPBG00000024969)	GPATCH3 (ENSCPBG00000024968)	NR0B2 (ENSCPBG00000024966)	NUDC (ENSCPBG00000024964)	KDF1 (ENSCPBG00000024960)	TRNP1 (ENSCPBG00000024958)	TENT5B (ENSCPBG00000024956) #19	SLC9A1 (ENSCPBG00000024951) #21	WDTC1 (ENSCPBG00000024946) #22	TMEM222 (ENSCPBG00000024943) #23	ENSCPBG00000024939	SYTL1 (ENSCPBG00000024928) #24	MAP3K6 (ENSCPBG00000024904) #25	ENSCPBG00000024896	CD164L2 (ENSCPBG00000024894) #26	GPR3 (ENSCPBG00000024890) #27	WASF2 (ENSCPBG00000024887) #28	ENSCPBG00000024883	AHDC1 (ENSCPBG00000024880) #29	ENSCPBG00000024875	ENSCPBG00000024874	ENSCPBG00000024872	ENSCPBG00000024868	ENSCPBG00000024865
Testudinidae	ANCESTRAL SPECIES	53								ENSGT00950000183172.B	ENSGT00390000004191	ENSGT00390000015719.c	ENSGT00940000155361	ENSGT00390000016565	ENSGT00390000017418	ENSGT00940000160747 #19	ENSGT00940000156338 #21	ENSGT00950000182900.B #22	ENSGT00390000007371 #23	ENSGT00940000154868.a.b	ENSGT00940000160932 #24	ENSGT00940000159398 #25	ENSGT00940000157531.k	ENSGT00530000063929.a.b #26	ENSGT01060000248564.b.a.a.a #27	ENSGT00950000182962.b.a #28	ENSGT00390000018883 #29	ENSGT00940000157554 #30	ENSGT00940000163923.f	ENSGT00940000163923.e.d	ENSGT00940000163923.e.c	ENSGT00940000163282.j	ENSGT00940000163178
Goode s thornscrub tortoise	MODERN SPECIES	12	ENSGEVG00005021248	ENSGEVG00005021249	RPS6KA1 (ENSGEVG00005021250)	ARID1A (ENSGEVG00005021251)	PIGV (ENSGEVG00005021252)	ZDHHC18 (ENSGEVG00005021254)	ENSGEVG00005021255	GPN2 (ENSGEVG00005021256)	GPATCH3 (ENSGEVG00005021257)	NR0B2 (ENSGEVG00005021258)	NUDC (ENSGEVG00005021259)	KDF1 (ENSGEVG00005021260)	TRNP1 (ENSGEVG00005021261)	TENT5B (ENSGEVG00005021262) #19	SLC9A1 (ENSGEVG00005021263) #21	WDTC1 (ENSGEVG00005021264) #22	TMEM222 (ENSGEVG00005021265) #23	ENSGEVG00005004298	SYTL1 (ENSGEVG00005004336) #24	MAP3K6 (ENSGEVG00005004395) #25	ENSGEVG00005004509	CD164L2 (ENSGEVG00005004553) #26	GPR3 (ENSGEVG00005004575) #27	WASF2 (ENSGEVG00005004635) #28	AHDC1 (ENSGEVG00005004682) #29	FGR (ENSGEVG00005004709) #30	ENSGEVG00005004746	ENSGEVG00005004770	ENSGEVG00005004831	ENSGEVG00005004911	ENSGEVG00005004945
Abingdon island giant tortoise	MODERN SPECIES	2225	DHDDS (ENSCABG00000010539)	ENSCABG00000010538	RPS6KA1 (ENSCABG00000009917)	ARID1A (ENSCABG00000009903)	PIGV (ENSCABG00000009900)	ZDHHC18 (ENSCABG00000009894)	SFN (ENSCABG00000009891)	ENSCABG00000009880	GPN2 (ENSCABG00000009877)	GPATCH3 (ENSCABG00000009876)	NR0B2 (ENSCABG00000009874)	NUDC (ENSCABG00000009873)	KDF1 (ENSCABG00000009869)	TENT5B (ENSCABG00000009867) #19	SLC9A1 (ENSCABG00000009864) #21	WDTC1 (ENSCABG00000009862) #22	TMEM222 (ENSCABG00000009856) #23	ENSCABG00000009853	SYTL1 (ENSCABG00000009852) #24	MAP3K6 (ENSCABG00000009850) #25	ENSCABG00000009847	ENSCABG00000009846	GPR3 (ENSCABG00000009844) #27	WASF2 (ENSCABG00000009843) #28	AHDC1 (ENSCABG00000009842) #29	FGR (ENSCABG00000009837) #30	ENSCABG00000009835	ENSCABG00000009830	ENSCABG00000009828	ENSCABG00000009827	IFI6 (ENSCABG00000009824)
Chinese turtle	MODERN SPECIES	1959	ENSPSIG00000006661	MANEAL (ENSPSIG00000006656)	YRDC (ENSPSIG00000006483)	MTF1 (ENSPSIG00000005687)	INPP5B (ENSPSIG00000005118)	SF3A3 (ENSPSIG00000004273)	FHL3 (ENSPSIG00000004237)	UTP11 (ENSPSIG00000004184)	ENSPSIG00000000580	RRAGC (ENSPSIG00000004140)	GJA9 (ENSPSIG00000000575)	RHBDL2 (ENSPSIG00000004115)	KDF1 (ENSPSIG00000004091)	TENT5B (ENSPSIG00000000566) #19	SLC9A1 (ENSPSIG00000003949) #21	WDTC1 (ENSPSIG00000003794) #22	ENSPSIG00000003776	TMEM222 (ENSPSIG00000003749) #23	ENSPSIG00000003708	SYTL1 (ENSPSIG00000003581) #24	ENSPSIG00000003572 #25
Archosauria	ANCESTRAL SPECIES	22	ENSGT00390000007879	ENSGT00950000182802.B	ENSGT00940000159314	ENSGT00940000155194	ENSGT00390000013174	ENSGT00940000156585	ENSGT01090000260040.b.b.b.a	ENSGT00950000183172.B	ENSGT00390000004191	ENSGT00390000015719.c	ENSGT00940000155361	ENSGT00390000016565	ENSGT00390000017418	ENSGT00940000160747 #19	ENSGT00940000156338 #21	ENSGT00950000182900.B #22	ENSGT00390000007371 #23	ENSGT00940000154868.a.b	ENSGT00940000160932 #24	ENSGT00940000159398 #25	ENSGT00530000063929.a.b #26	ENSGT01060000248564.b.a.a.a #27	ENSGT00950000182962.b.a #28	ENSGT00390000018883 #29	ENSGT00940000157554 #30	ENSGT00940000163923.f	ENSGT00940000163923.e	ENSGT00940000163282.j	ENSGT00940000161215.hc.b	ENSGT00940000160073 #32	ENSGT00950000183168.B.a
Australian saltwater crocodile	MODERN SPECIES	58	DHDDS (ENSCPRG00005004188)	ENSCPRG00005004185	RPS6KA1 (ENSCPRG00005004179)	ENSCPRG00005003630	PIGV (ENSCPRG00005003573)	ZDHHC18 (ENSCPRG00005003565)	SFN (ENSCPRG00005003552)	ENSCPRG00005003521	GPN2 (ENSCPRG00005003511)	GPATCH3 (ENSCPRG00005003479)	NR0B2 (ENSCPRG00005003471)	NUDC (ENSCPRG00005003451)	KDF1 (ENSCPRG00005003440)	TENT5B (ENSCPRG00005003432) #19	SLC9A1 (ENSCPRG00005003430) #21	WDTC1 (ENSCPRG00005003421) #22	TMEM222 (ENSCPRG00005003410) #23	ENSCPRG00005003408	SYTL1 (ENSCPRG00005003362) #24	MAP3K6 (ENSCPRG00005003286) #25	CD164L2 (ENSCPRG00005003266) #26	GPR3 (ENSCPRG00005003261) #27	WASF2 (ENSCPRG00005003258) #28	AHDC1 (ENSCPRG00005003254) #29	ENSCPRG00005003238	ENSCPRG00005003225	ENSCPRG00005003223	ENSCPRG00005003220	ENSCPRG00005003204	FAM76A (ENSCPRG00005003198) #32	SESN2 (ENSCPRG00005003191)
Aves	ANCESTRAL SPECIES	28	ENSGT00390000007879	ENSGT00950000182802.B	ENSGT00940000159314	ENSGT00940000155194	ENSGT00390000013174	ENSGT00940000156585	ENSGT01090000260040.b.b.b.a	ENSGT00950000183172.B	ENSGT00390000004191	ENSGT00390000015719.c	ENSGT00940000155361	ENSGT00390000016565	ENSGT00390000017418	ENSGT00940000160747 #19	ENSGT00940000156338 #21	ENSGT00950000182900.B #22	ENSGT00390000007371 #23	ENSGT00940000160932 #24	ENSGT00940000159398 #25	ENSGT00530000063929.a.b #26	ENSGT01060000248564.b.a.a.a #27	ENSGT00950000182962.b.a #28	ENSGT00390000018883 #29	ENSGT00940000157554 #30	ENSGT00940000163923.f	ENSGT00940000163923.e	ENSGT00940000160073 #32	ENSGT00950000183168.B.a	ENSGT00940000157582	ENSGT00940000155543	ENSGT00940000157669
African ostrich	MODERN SPECIES	868			DHDDS (ENSSCUG00000014706)	ENSSCUG00000014708	RPS6KA1 (ENSSCUG00000014713)	ARID1A (ENSSCUG00000014721)	PIGV (ENSSCUG00000014731)	SFN (ENSSCUG00000014738)	GPN2 (ENSSCUG00000014741)	GPATCH3 (ENSSCUG00000014745)	NR0B2 (ENSSCUG00000014749)	NUDC (ENSSCUG00000014750)	KDF1 (ENSSCUG00000014753)	TENT5B (ENSSCUG00000014755) #19	SLC9A1 (ENSSCUG00000014762) #21	WDTC1 (ENSSCUG00000014773) #22	ENSSCUG00000014775	ENSSCUG00000014777 #25	ENSSCUG00000014781	GPR3 (ENSSCUG00000014783) #27	WASF2 (ENSSCUG00000014790) #28
Neognathae	ANCESTRAL SPECIES	26	ENSGT00390000007879	ENSGT00950000182802.B	ENSGT00940000159314	ENSGT00940000155194	ENSGT00390000013174	ENSGT00940000156585	ENSGT01090000260040.b.b.b.a	ENSGT00950000183172.B	ENSGT00390000004191	ENSGT00390000015719.c	ENSGT00940000155361	ENSGT00390000016565	ENSGT00390000017418	ENSGT00940000160747 #19	ENSGT00940000156338 #21	ENSGT00950000182900.B #22	ENSGT00390000007371 #23	ENSGT00940000160932 #24	ENSGT00940000159398 #25	ENSGT00530000063929.a.b #26	ENSGT01060000248564.b.a.a.a #27	ENSGT00950000182962.b.a #28	ENSGT00390000018883 #29	ENSGT00940000157554 #30	ENSGT00940000163923.f	ENSGT00940000163923.e	ENSGT00940000160073 #32	ENSGT00950000183168.B.a	ENSGT00940000157582	ENSGT00940000155543	ENSGT00940000157669
Galloanserae	ANCESTRAL SPECIES	25	ENSGT00390000007879	ENSGT00950000182802.B	ENSGT00940000159314	ENSGT00940000155194	ENSGT00390000013174	ENSGT00940000156585	ENSGT01090000260040.b.b.b.a	ENSGT00950000183172.B	ENSGT00390000004191	ENSGT00390000015719.c	ENSGT00940000155361	ENSGT00390000016565	ENSGT00390000017418	ENSGT00940000160747 #19	ENSGT00940000156338 #21	ENSGT00950000182900.B #22	ENSGT00390000007371 #23	ENSGT00940000160932 #24	ENSGT00960000191085	ENSGT00940000159398 #25	ENSGT00530000063929.a.b #26	ENSGT01060000248564.b.a.a.a #27	ENSGT00950000182962.b.a #28	ENSGT00390000018883 #29	ENSGT00940000157554 #30	ENSGT00940000163923.f	ENSGT00940000163923.e	ENSGT00940000160073 #32	ENSGT00950000183168.B.a	ENSGT00940000157582	ENSGT00940000155543
Anatidae	ANCESTRAL SPECIES	21	ENSGT00390000007879	ENSGT00950000182802.B	ENSGT00940000159314	ENSGT00940000155194	ENSGT00390000013174	ENSGT00940000156585	ENSGT01090000260040.b.b.b.a	ENSGT00950000183172.B	ENSGT00390000004191	ENSGT00390000015719.c	ENSGT00940000155361	ENSGT00390000016565	ENSGT00960000189819	ENSGT00940000160747 #19	ENSGT00940000156338 #21	ENSGT00950000182900.B #22	ENSGT00390000007371 #23	ENSGT00940000159398 #25	ENSGT00530000063929.a.b #26	ENSGT01060000248564.b.a.a.a #27	ENSGT00950000182962.b.a #28	ENSGT00390000018883 #29	ENSGT00940000163923.f.b	ENSGT00940000160073 #32	ENSGT00950000183168.B.a	ENSGT00940000157582	ENSGT00940000155543	ENSGT00940000157669	ENSGT00940000157034	ENSGT00940000161085	ENSGT00940000160992
Pink-footed goose	MODERN SPECIES	73	LIN28A (ENSABRG00000001217)	DHDDS (ENSABRG00000001443)	ENSABRG00000001460	RPS6KA1 (ENSABRG00000001482)	ARID1A (ENSABRG00000001565)	PIGV (ENSABRG00000001605)	ZDHHC18 (ENSABRG00000001770)	SFN (ENSABRG00000001785)	GPN2 (ENSABRG00000001830)	GPATCH3 (ENSABRG00000001851)	NR0B2 (ENSABRG00000001870)	NUDC (ENSABRG00000001885)	KDF1 (ENSABRG00000001922)	TENT5B (ENSABRG00000001947) #19	SLC9A1 (ENSABRG00000001962) #21	WDTC1 (ENSABRG00000002008) #22	TMEM222 (ENSABRG00000002037) #23	MAP3K6 (ENSABRG00000002099) #25	CD164L2 (ENSABRG00000002608) #26	GPR3 (ENSABRG00000002622) #27	WASF2 (ENSABRG00000002634) #28	ENSABRG00000002652	AHDC1 (ENSABRG00000002665) #29	ENSABRG00000002676	ENSABRG00000002709	ENSABRG00000002732	FAM76A (ENSABRG00000002772) #32	SESN2 (ENSABRG00000002796)	PHACTR4 (ENSABRG00000002835)	RCC1 (ENSABRG00000002909)	OPRD1 (ENSABRG00000002932)
Duck	MODERN SPECIES	15	ENSAPLG00000020546	RPS6KA1 (ENSAPLG00000010872)	ARID1A (ENSAPLG00000010807)	PIGV (ENSAPLG00000010797)	SFN (ENSAPLG00000010782)	ZDHHC18 (ENSAPLG00000010792)	GPN2 (ENSAPLG00000010758)	GPATCH3 (ENSAPLG00000010745)	NR0B2 (ENSAPLG00000010744)	NUDC (ENSAPLG00000010698)	KDF1 (ENSAPLG00000010691)	ENSAPLG00000019975	ENSAPLG00000025590	TENT5B (ENSAPLG00000001361) #19	SLC9A1 (ENSAPLG00000016147) #21	WDTC1 (ENSAPLG00000015930) #22	TMEM222 (ENSAPLG00000021290) #23	ENSAPLG00000016993	ENSAPLG00000015805 #25	WASF2 (ENSAPLG00000010236) #28	ENSAPLG00000022698	FAM76A (ENSAPLG00000004037) #32	SESN2 (ENSAPLG00000010959)	ENSAPLG00000022334	PHACTR4 (ENSAPLG00000019553)	RCC1 (ENSAPLG00000026840)	OPRD1 (ENSAPLG00000002972)	TCEA3 (ENSAPLG00000025037)	ENSAPLG00000018663	ENSAPLG00000031239	E2F2 (ENSAPLG00000021411)
Phasianidae	ANCESTRAL SPECIES	24	ENSGT00950000182852.A.b	ENSGT00940000157193	ENSGT00390000002053	ENSGT00950000183034.B	ENSGT00940000162934	ENSGT00940000156585	ENSGT01090000260040.b.b.b.a	ENSGT00950000183172.B	ENSGT00390000004191	ENSGT00390000015719.c	ENSGT00940000155361	ENSGT00390000016565	ENSGT00390000017418	ENSGT00940000160747 #19	ENSGT00940000156338 #21	ENSGT00950000182900.B #22	ENSGT00390000007371 #23	ENSGT00940000160932 #24	ENSGT00940000159398 #25	ENSGT00960000189365	ENSGT00950000182962.b.a #28	ENSGT00390000018883 #29	ENSGT00940000157554 #30	ENSGT00940000163923.f	ENSGT00940000163923.e	ENSGT00940000160073 #32	ENSGT00950000183168.B.a	ENSGT00940000157582	ENSGT00940000155543	ENSGT00940000157669	ENSGT00940000157034
Japanese quail	MODERN SPECIES	15	LUZP1 (ENSCJPG00005015576)	KDM1A (ENSCJPG00005015581)	ZMPSTE24 (ENSCJPG00005016012)	RLF (ENSCJPG00005016014)	ENSCJPG00005016016	ZDHHC18 (ENSCJPG00005016018)	SFN (ENSCJPG00005016019)	GPN2 (ENSCJPG00005016020)	GPATCH3 (ENSCJPG00005016021)	NR0B2 (ENSCJPG00005016022)	NUDC (ENSCJPG00005016024)	KDF1 (ENSCJPG00005016025)	ENSCJPG00005016026	TENT5B (ENSCJPG00005016028) #19	SLC9A1 (ENSCJPG00005016029) #21	WDTC1 (ENSCJPG00005016030) #22	TMEM222 (ENSCJPG00005016031) #23	ENSCJPG00005016032	ENSCJPG00005016033	WASF2 (ENSCJPG00005016036) #28	AHDC1 (ENSCJPG00005016038) #29	FGR (ENSCJPG00005016042) #30	ENSCJPG00005016044	ENSCJPG00005016045	FAM76A (ENSCJPG00005016099) #32	SESN2 (ENSCJPG00005016100)	PHACTR4 (ENSCJPG00005016101)	RCC1 (ENSCJPG00005016103)	OPRD1 (ENSCJPG00005016105)	TCEA3 (ENSCJPG00005016106)	ASAP3 (ENSCJPG00005016116)
Phasianidae_b	ANCESTRAL SPECIES	23	ENSGT00950000182852.A.b	ENSGT00940000157193	ENSGT00390000002053	ENSGT00950000183034.B	ENSGT00940000162934	ENSGT00940000156585	ENSGT01090000260040.b.b.b.a	ENSGT00950000183172.B	ENSGT00390000004191	ENSGT00390000015719.c	ENSGT00940000155361	ENSGT00390000016565	ENSGT00390000017418	ENSGT00940000160747 #19	ENSGT00940000156338 #21	ENSGT00950000182900.B #22	ENSGT00390000007371 #23	ENSGT00940000160932 #24	ENSGT00940000159398 #25	ENSGT00960000189365	ENSGT00950000182962.b.a #28	ENSGT00390000018883 #29	ENSGT00940000157554 #30	ENSGT00940000163923.f	ENSGT00940000163923.e	ENSGT00940000160073 #32	ENSGT00950000183168.B.a	ENSGT00940000157582	ENSGT00940000155543	ENSGT00940000157669	ENSGT00940000157034
Turkey	MODERN SPECIES	17	ENSMGAG00000009472	DHDDS (ENSMGAG00000009462)	LIN28A (ENSMGAG00000009456)	CRYBG2 (ENSMGAG00000000679)	UBXN11 (ENSMGAG00000000686)	SH3BGRL3 (ENSMGAG00000021285)	CEP85 (ENSMGAG00000000692)	CNKSR1 (ENSMGAG00000000695)	ZNF593 (ENSMGAG00000016623)	ENSMGAG00000000702	ENSMGAG00000000710	ENSMGAG00000021765	ENSMGAG00000001349 #28	ENSMGAG00000022066	ENSMGAG00000018576	ENSMGAG00000001406 #22	ENSMGAG00000001425 #21	ENSMGAG00000000836	KDF1 (ENSMGAG00000000825)	NR0B2 (ENSMGAG00000000867)	GPATCH3 (ENSMGAG00000000813)	ZDHHC18 (ENSMGAG00000020751)	ENSMGAG00000015704	GPN2 (ENSMGAG00000000868)	ENSMGAG00000001272	ENSMGAG00000001236	ENSMGAG00000001228	ENSMGAG00000015701	ENSMGAG00000001000	ENSMGAG00000020265	PTAFR (ENSMGAG00000015699)
Chicken	MODERN SPECIES	15	LUZP1 (ENSGALG00010014165)	KDM1A (ENSGALG00010014192)	ZMPSTE24 (ENSGALG00010014225)	RLF (ENSGALG00010013981)	ENSGALG00010013989	ZDHHC18 (ENSGALG00010014002)	SFN (ENSGALG00010014011)	GPN2 (ENSGALG00010013087)	GPATCH3 (ENSGALG00010013093)	NUDC (ENSGALG00010013165)	NR0B2 (ENSGALG00010013182)	KDF1 (ENSGALG00010013187)	TRNP1 (ENSGALG00010017829)	TENT5B (ENSGALG00010012654) #19	SLC9A1 (ENSGALG00010016793) #21	WDTC1 (ENSGALG00010016799) #22	TMEM222 (ENSGALG00010016802) #23	SYTL1 (ENSGALG00010016809) #24	MAP3K6 (ENSGALG00010016816) #25	ENSGALG00010016825	WASF2 (ENSGALG00010016849) #28	AHDC1 (ENSGALG00010016852) #29	FGR (ENSGALG00010016861) #30	ENSGALG00010018329	ENSGALG00010016870	FAM76A (ENSGALG00010018339) #32	SESN2 (ENSGALG00010016875)	PHACTR4 (ENSGALG00010016925)	RCC1 (ENSGALG00010016936)	OPRD1 (ENSGALG00010016944)	TCEA3 (ENSGALG00010016543)
Neognathae_b	ANCESTRAL SPECIES	26	ENSGT00390000007879	ENSGT00950000182802.B	ENSGT00940000159314	ENSGT00940000155194	ENSGT00390000013174	ENSGT00940000156585	ENSGT01090000260040.b.b.b.a	ENSGT00950000183172.B	ENSGT00390000004191	ENSGT00390000015719.c	ENSGT00940000155361	ENSGT00390000016565	ENSGT00390000017418	ENSGT00940000160747 #19	ENSGT00940000156338 #21	ENSGT00950000182900.B #22	ENSGT00390000007371 #23	ENSGT00940000160932 #24	ENSGT00940000159398 #25	ENSGT00530000063929.a.b #26	ENSGT01060000248564.b.a.a.a #27	ENSGT00950000182962.b.a #28	ENSGT00390000018883 #29	ENSGT00940000157554 #30	ENSGT00940000163923.f	ENSGT00940000163923.e	ENSGT00940000160073 #32	ENSGT00950000183168.B.a	ENSGT00940000157582	ENSGT00940000155543	ENSGT00940000157669
Passeriformes	ANCESTRAL SPECIES	23	ENSGT00390000007879	ENSGT00950000182802.B	ENSGT00940000159314	ENSGT00940000155194	ENSGT00390000013174	ENSGT00940000156585	ENSGT01090000260040.b.b.b.a	ENSGT00950000183172.B	ENSGT00390000004191	ENSGT00390000015719.c	ENSGT00940000155361	ENSGT00390000016565	ENSGT00390000017418	ENSGT00940000160747 #19	ENSGT00940000156338 #21	ENSGT00950000182900.B #22	ENSGT00390000007371 #23	ENSGT00940000160932 #24	ENSGT00530000063929.a.b #26	ENSGT01060000248564.b.a.a.a #27	ENSGT00950000182962.b.a #28	ENSGT00390000018883 #29	ENSGT00940000157554 #30	ENSGT00940000163923.f	ENSGT00940000160073 #32	ENSGT00950000183168.B.a	ENSGT00940000157582	ENSGT00940000155543	ENSGT00940000157669	ENSGT00940000157034	ENSGT00940000161085
Passeriformes_d	ANCESTRAL SPECIES	23	ENSGT00390000007879	ENSGT00950000182802.B	ENSGT00940000159314	ENSGT00940000155194	ENSGT00390000013174	ENSGT00940000156585	ENSGT01090000260040.b.b.b.a	ENSGT00950000183172.B	ENSGT00390000004191	ENSGT00390000015719.c	ENSGT00940000155361	ENSGT00390000016565	ENSGT00390000017418	ENSGT00940000160747 #19	ENSGT00940000156338 #21	ENSGT00950000182900.B #22	ENSGT00390000007371 #23	ENSGT00940000160932 #24	ENSGT00530000063929.a.b #26	ENSGT01060000248564.b.a.a.a #27	ENSGT00950000182962.b.a #28	ENSGT00390000018883 #29	ENSGT00940000157554 #30	ENSGT00940000163923.f	ENSGT00940000160073 #32	ENSGT00950000183168.B.a	ENSGT00940000157582	ENSGT00940000155543	ENSGT00940000157669	ENSGT00940000157034	ENSGT00940000161085
Passeriformes_g	ANCESTRAL SPECIES	22	ENSGT00950000182802.B	ENSGT00940000159314	ENSGT00940000155194	ENSGT00390000013174	ENSGT00940000156585	ENSGT01090000260040.b.b.b.a	ENSGT00950000183172.B	ENSGT00390000004191	ENSGT00390000015719.c	ENSGT00940000155361	ENSGT00390000016565	ENSGT00390000017418	ENSGT00940000160747.a #19	ENSGT00940000160747.b.a #19	ENSGT00940000156338 #21	ENSGT00950000182900.B #22	ENSGT00390000007371 #23	ENSGT00940000160932 #24	ENSGT00530000063929.a.b #26	ENSGT01060000248564.b.a.a.a #27	ENSGT00950000182962.b.a #28	ENSGT00390000018883 #29	ENSGT00940000157554 #30	ENSGT00940000163923.f	ENSGT00940000160073 #32	ENSGT00950000183168.B.a	ENSGT00940000157582	ENSGT00940000155543	ENSGT00940000157669	ENSGT00940000157034	ENSGT00940000165326
Passeroidea	ANCESTRAL SPECIES	22	ENSGT00950000182802.B	ENSGT00940000159314	ENSGT00940000155194	ENSGT00390000013174	ENSGT00940000156585	ENSGT01090000260040.b.b.b.a	ENSGT00950000183172.B	ENSGT00390000004191	ENSGT00390000015719.c	ENSGT00940000155361	ENSGT00390000016565	ENSGT00390000017418	ENSGT00940000160747.a #19	ENSGT00940000160747.b.a #19	ENSGT00940000156338 #21	ENSGT00950000182900.B #22	ENSGT00390000007371 #23	ENSGT00940000160932 #24	ENSGT00530000063929.a.b #26	ENSGT01060000248564.b.a.a.a #27	ENSGT00950000182962.b.a #28	ENSGT00390000018883 #29	ENSGT00940000157554 #30	ENSGT00940000163923.f	ENSGT00940000160073 #32	ENSGT00950000183168.B.a	ENSGT00940000157582	ENSGT00940000155543	ENSGT00940000157669	ENSGT00940000157034	ENSGT00940000165326
Common canary	MODERN SPECIES	65	ENSSCAG00000007132	LIN28A (ENSSCAG00000007133)	DHDDS (ENSSCAG00000007136)	ENSSCAG00000007138	RPS6KA1 (ENSSCAG00000007144)	ARID1A (ENSSCAG00000007186)	PIGV (ENSSCAG00000007303)	ZDHHC18 (ENSSCAG00000007309)	GPN2 (ENSSCAG00000007312)	GPATCH3 (ENSSCAG00000007317)	NR0B2 (ENSSCAG00000007325)	NUDC (ENSSCAG00000007332)	KDF1 (ENSSCAG00000007336)	ENSSCAG00000007342 #19	SLC9A1 (ENSSCAG00000007437) #21	WDTC1 (ENSSCAG00000007881) #22	TMEM222 (ENSSCAG00000007892) #23	SYTL1 (ENSSCAG00000007895) #24	ENSSCAG00000007899 #26	GPR3 (ENSSCAG00000007910) #27	WASF2 (ENSSCAG00000007921) #28	AHDC1 (ENSSCAG00000007925) #29	FGR (ENSSCAG00000007933) #30	ENSSCAG00000007964	FAM76A (ENSSCAG00000007969) #32	SESN2 (ENSSCAG00000007973)	PHACTR4 (ENSSCAG00000007987)	RCC1 (ENSSCAG00000007998)	OPRD1 (ENSSCAG00000008006)	TCEA3 (ENSSCAG00000008008)	ENSSCAG00000008039
Zebra finch	MODERN SPECIES	16	LIN28A (ENSTGUG00000021101)	DHDDS (ENSTGUG00000001032)	RPS6KA1 (ENSTGUG00000001002)	ARID1A (ENSTGUG00000000997)	PIGV (ENSTGUG00000000996)	ZDHHC18 (ENSTGUG00000000992)	SFN (ENSTGUG00000018532)	GPN2 (ENSTGUG00000000990)	GPATCH3 (ENSTGUG00000000986)	NR0B2 (ENSTGUG00000000984)	NUDC (ENSTGUG00000000980)	KDF1 (ENSTGUG00000000978)	TRNP1 (ENSTGUG00000027930)	TENT5B (ENSTGUG00000000977) #19	SLC9A1 (ENSTGUG00000000976) #21	WDTC1 (ENSTGUG00000000973) #22	SYTL1 (ENSTGUG00000025002) #24	ENSTGUG00000023189	GPR3 (ENSTGUG00000000969) #27	WASF2 (ENSTGUG00000000966) #28	AHDC1 (ENSTGUG00000022877) #29	ENSTGUG00000000957	ENSTGUG00000000955	FAM76A (ENSTGUG00000000951) #32	SESN2 (ENSTGUG00000000945)	PHACTR4 (ENSTGUG00000000943)	RCC1 (ENSTGUG00000000940)	OPRD1 (ENSTGUG00000000934)	TCEA3 (ENSTGUG00000000930)	ENSTGUG00000000911	E2F2 (ENSTGUG00000000907)
Medium ground finch	MODERN SPECIES	139	ENSGFOG00000007363	LIN28A (ENSGFOG00000007352)	DHDDS (ENSGFOG00000007344)	ENSGFOG00000007336	RPS6KA1 (ENSGFOG00000006433)	ARID1A (ENSGFOG00000006335)	PIGV (ENSGFOG00000006314)	ZDHHC18 (ENSGFOG00000006307)	SFN (ENSGFOG00000006297)	GPN2 (ENSGFOG00000006290)	GPATCH3 (ENSGFOG00000006273)	NUDC (ENSGFOG00000006257)	KDF1 (ENSGFOG00000006243)	TENT5B (ENSGFOG00000006235) #19	SLC9A1 (ENSGFOG00000006232) #21	WDTC1 (ENSGFOG00000006223) #22	TMEM222 (ENSGFOG00000006214) #23	CD164L2 (ENSGFOG00000006209) #26	WASF2 (ENSGFOG00000006201) #28	FGR (ENSGFOG00000006174) #30	ENSGFOG00000006139	FAM76A (ENSGFOG00000006127) #32	SESN2 (ENSGFOG00000006120)	PHACTR4 (ENSGFOG00000006113)	RCC1 (ENSGFOG00000006100)	ID3 (ENSGFOG00000006093)	E2F2 (ENSGFOG00000006080)	ENSGFOG00000006066	TCEA3 (ENSGFOG00000006059)	OPRD1 (ENSGFOG00000006052)
Flycatcher	MODERN SPECIES	15	ENSFALG00000027293	RPS6KA1 (ENSFALG00000000347)	ARID1A (ENSFALG00000000332)	PIGV (ENSFALG00000000325)	ENSFALG00000027764	ENSFALG00000027881	SFN (ENSFALG00000014247)	GPN2 (ENSFALG00000000321)	GPATCH3 (ENSFALG00000024384)	NR0B2 (ENSFALG00000006497)	NUDC (ENSFALG00000006516)	KDF1 (ENSFALG00000006529)	TENT5B (ENSFALG00000014519) #19	SLC9A1 (ENSFALG00000000683) #21	ENSFALG00000023022	WDTC1 (ENSFALG00000000691) #22	SYTL1 (ENSFALG00000000694) #24	CD164L2 (ENSFALG00000023339) #26	GPR3 (ENSFALG00000000702) #27	WASF2 (ENSFALG00000000708) #28	FGR (ENSFALG00000002793) #30	ENSFALG00000002817	SESN2 (ENSFALG00000010708)	PHACTR4 (ENSFALG00000010715)	RCC1 (ENSFALG00000010730)	TCEA3 (ENSFALG00000010750)	ASAP3 (ENSFALG00000010769)	E2F2 (ENSFALG00000010803)	ID3 (ENSFALG00000010806)
Great tit	MODERN SPECIES	15	DHDDS (ENSPMJG00000018001)	ENSPMJG00000018002	RPS6KA1 (ENSPMJG00000018004)	ARID1A (ENSPMJG00000018411)	PIGV (ENSPMJG00000018412)	ENSPMJG00000018413	SFN (ENSPMJG00000018415)	GPN2 (ENSPMJG00000018416)	ENSPMJG00000018417	GPATCH3 (ENSPMJG00000018418)	NR0B2 (ENSPMJG00000018419)	NUDC (ENSPMJG00000018420)	KDF1 (ENSPMJG00000018421)	TENT5B (ENSPMJG00000018423) #19	SLC9A1 (ENSPMJG00000018424) #21	WDTC1 (ENSPMJG00000018425) #22	TMEM222 (ENSPMJG00000018426) #23	SYTL1 (ENSPMJG00000018427) #24	ENSPMJG00000018428	WASF2 (ENSPMJG00000018431) #28	AHDC1 (ENSPMJG00000018432) #29	FGR (ENSPMJG00000018435) #30	ENSPMJG00000018436	FAM76A (ENSPMJG00000018437) #32	SESN2 (ENSPMJG00000018438)	PHACTR4 (ENSPMJG00000018439)	RCC1 (ENSPMJG00000018440)	OPRD1 (ENSPMJG00000018442)	TCEA3 (ENSPMJG00000018443)	ENSPMJG00000018444	E2F2 (ENSPMJG00000018445)
Neognathae_c	ANCESTRAL SPECIES	31	ENSGT00390000007879	ENSGT00950000182802.B	ENSGT00940000159314	ENSGT00940000155194	ENSGT00390000013174	ENSGT00940000156585	ENSGT01090000260040.b.b.b.a	ENSGT00950000183172.B	ENSGT00390000004191	ENSGT00390000015719.c	ENSGT00940000155361	ENSGT00390000016565	ENSGT00390000017418	ENSGT00940000160747 #19	ENSGT00940000156338 #21	ENSGT00950000182900.B #22	ENSGT00390000007371 #23	ENSGT00940000160932 #24	ENSGT00940000159398 #25	ENSGT00530000063929.a.b #26	ENSGT01060000248564.b.a.a.a #27	ENSGT00950000182962.b.a #28	ENSGT00390000018883 #29
Golden eagle	MODERN SPECIES	7	DHDDS (ENSACCG00020009550)	ENSACCG00020009567	RPS6KA1 (ENSACCG00020009614)	ARID1A (ENSACCG00020009663)	PIGV (ENSACCG00020009693)	ZDHHC18 (ENSACCG00020009703)	SFN (ENSACCG00020009727)	GPN2 (ENSACCG00020009746)	GPATCH3 (ENSACCG00020009759)	NR0B2 (ENSACCG00020009770)	NUDC (ENSACCG00020009786)	KDF1 (ENSACCG00020009796)	TRNP1 (ENSACCG00020009812)	TENT5B (ENSACCG00020009834) #19	SLC9A1 (ENSACCG00020009844) #21	WDTC1 (ENSACCG00020009856) #22	TMEM222 (ENSACCG00020009875) #23	SYTL1 (ENSACCG00020009888) #24	MAP3K6 (ENSACCG00020010161) #25	ENSACCG00020010410 #26	GPR3 (ENSACCG00020010424) #27	WASF2 (ENSACCG00020010443) #28	AHDC1 (ENSACCG00020010469) #29	ENSACCG00020010496	ENSACCG00020010553	ENSACCG00020010590	FAM76A (ENSACCG00020010617) #32	SESN2 (ENSACCG00020010646)	PHACTR4 (ENSACCG00020010676)	RCC1 (ENSACCG00020010714)	OPRD1 (ENSACCG00020010727)
Kakapo	MODERN SPECIES	6														TENT5B (ENSSHBG00005007375) #19	SLC9A1 (ENSSHBG00005007382) #21	WDTC1 (ENSSHBG00005007394) #22	TMEM222 (ENSSHBG00005007411) #23	CD164L2 (ENSSHBG00005007438) #26	GPR3 (ENSSHBG00005007451) #27	WASF2 (ENSSHBG00005007459) #28	ENSSHBG00005007489	ENSSHBG00005007587	ENSSHBG00005007623	FAM76A (ENSSHBG00005007686) #32	SESN2 (ENSSHBG00005007712)	PHACTR4 (ENSSHBG00005007730)	RCC1 (ENSSHBG00005007765)	OPRD1 (ENSSHBG00005007780)	TCEA3 (ENSSHBG00005007790)	ENSSHBG00005007799	ASAP3 (ENSSHBG00005008310)
Anura	ANCESTRAL SPECIES	34													ENSGT00940000157554 #30	ENSGT00390000018883 #29	ENSGT00950000182962.b.a #28	ENSGT00950000182900.B #22	ENSGT00390000007371 #23	ENSGT00940000160932 #24	ENSGT00940000156338 #21	ENSGT00940000160747 #19	ENSGT00960000189819	ENSGT00390000016565.f	ENSGT00390000016565.e	ENSGT00940000155361	ENSGT00390000004191	ENSGT00950000183172.B	ENSGT00390000013174	ENSGT00940000155194	ENSGT00940000159314	ENSGT00950000182802.B	ENSGT00390000007879
Leishan spiny toad	MODERN SPECIES	5	ENSLLEG00000001736	ENSLLEG00000001723	ENSLLEG00000001713	THEMIS2 (ENSLLEG00000001699)	UBE2T (ENSLLEG00000001681)	STX12 (ENSLLEG00000001602) #33	PPP1R8 (ENSLLEG00000001541) #34	ENSLLEG00000001520	ENSLLEG00000001504	ENSLLEG00000001475	FGR (ENSLLEG00000001445) #30	AHDC1 (ENSLLEG00000001420) #29	WASF2 (ENSLLEG00000001386) #28	ENSLLEG00000001381	ENSLLEG00000001370	WDTC1 (ENSLLEG00000001340) #22	TMEM222 (ENSLLEG00000001310) #23	SYTL1 (ENSLLEG00000001241) #24	ENSLLEG00000001141	SLC9A1 (ENSLLEG00000000871) #21	TENT5B (ENSLLEG00000000845) #19	ENSLLEG00000000840	ENSLLEG00000000823	NUDC (ENSLLEG00000000702)	GPATCH3 (ENSLLEG00000000641)	ENSLLEG00000000635	GPN2 (ENSLLEG00000000578)	PIGV (ENSLLEG00000000554)	ARID1A (ENSLLEG00000007417)	ENSLLEG00000007395	RPS6KA1 (ENSLLEG00000007013)
Frog	MODERN SPECIES	2	rcc1 (ENSXETG00000012969)	oprd1 (ENSXETG00000033842)	tcea3 (ENSXETG00000012975)	ENSXETG00000020617	taf12 (ENSXETG00000020616)	rab39a (ENSXETG00000020622)	gmeb1 (ENSXETG00000020625)	ythdf2 (ENSXETG00000020636)	gngt2.1 (ENSXETG00000030624)	msra.2 (ENSXETG00000020629)	id3 (ENSXETG00000020653)	sesn2 (ENSXETG00000020644)	fgr (ENSXETG00000020659) #30	ahdc1 (ENSXETG00000018716) #29	wasf2 (ENSXETG00000003647) #28	wdtc1 (ENSXETG00000020662) #22	tmem222 (ENSXETG00000020673) #23	sytl1 (ENSXETG00000020676) #24	slc9a1 (ENSXETG00000020678) #21	tent5b (ENSXETG00000020683) #19	ENSXETG00000036010	kdf1 (ENSXETG00000020684)	nudc (ENSXETG00000020686)	gpatch3 (ENSXETG00000020692)	pigv (ENSXETG00000020693)	ENSXETG00000044298	arid1a (ENSXETG00000020695)	rps6ka1 (ENSXETG00000012289)	ENSXETG00000043352	hmgn2 (ENSXETG00000012323)	lin28a (ENSXETG00000012324)
Coelacanth	MODERN SPECIES	306		LIN28A (ENSLACG00000002747)	ENSLACG00000004677	DHDDS (ENSLACG00000005203)	RPS6KA1 (ENSLACG00000007521)	ZDHHC18 (ENSLACG00000008383)	PIGV (ENSLACG00000008619)	ARID1A (ENSLACG00000008843)	ENSLACG00000011042	GPN2 (ENSLACG00000011279)	GPATCH3 (ENSLACG00000011400)	NR0B2 (ENSLACG00000011527)	NUDC (ENSLACG00000011655)	KDF1 (ENSLACG00000012128)	ENSLACG00000013069	WDTC1 (ENSLACG00000014179) #22	TMEM222 (ENSLACG00000014459) #23	tpbga (ENSLACG00000014617)	SYTL1 (ENSLACG00000015092) #24	MAP3K6 (ENSLACG00000015267) #25	ENSLACG00000015555	ENSLACG00000015622	ENSLACG00000015719	GPR3 (ENSLACG00000022227) #27	WASF2 (ENSLACG00000016132) #28	ENSLACG00000016242	AHDC1 (ENSLACG00000016403) #29	ENSLACG00000016880	FGR (ENSLACG00000016907) #30	FAM76A (ENSLACG00000017154) #32	zgc:110239 (ENSLACG00000017200)
Actinopterygii	ANCESTRAL SPECIES	304																ENSGT00950000182900.B #22	ENSGT00390000007371 #23	ENSGT00940000154868.a.b	ENSGT00390000016565	ENSGT00390000015719.c	ENSGT00940000155361	ENSGT00390000004191	ENSGT00950000183172.B	ENSGT00940000166269	ENSGT00940000155194	ENSGT00390000013174	ENSGT00940000156585	ENSGT00940000165028
Neopterygii	ANCESTRAL SPECIES	56													ENSGT00520000055567.b	ENSGT00940000157260.t	ENSGT00620000087993.a.b	ENSGT00950000182900.B #22	ENSGT00390000007371 #23	ENSGT00940000154868.a.b	ENSGT00390000016565	ENSGT00390000015719.c	ENSGT00940000155361	ENSGT00390000004191	ENSGT00950000183172.B	ENSGT00940000166269	ENSGT00940000155194	ENSGT00390000013174	ENSGT00940000156585.c.a	ENSGT00940000156585.c.b	ENSGT00940000165028	ENSGT00940000157034	ENSGT00940000157669
Osteoglossocephalai	ANCESTRAL SPECIES	229													ENSGT00520000055567.b	ENSGT00940000157260.t	ENSGT00620000087993.a.b	ENSGT00950000182900.B #22	ENSGT00390000007371.f #23	ENSGT00940000154868.a.b.b	ENSGT00390000016565.g	ENSGT00390000015719.c.c	ENSGT00390000004191	ENSGT00950000183172.B	ENSGT00940000166269	ENSGT00940000155194	ENSGT00390000013174	ENSGT00940000156585.c.a	ENSGT00940000165028	ENSGT00940000157034	ENSGT00940000157669	ENSGT00940000155543	ENSGT00940000157582.g
Clupeocephala	ANCESTRAL SPECIES	204														ENSGT00520000055567.b	ENSGT00620000087993.a.b	ENSGT00950000182900.B #22	ENSGT00390000007371.f #23	ENSGT00940000154868.a.b.b	ENSGT00390000016565.g	ENSGT00390000015719.c.c	ENSGT00390000004191	ENSGT00950000183172.B	ENSGT00940000155194.v.b	ENSGT00390000013174	ENSGT00940000156585.c.a	ENSGT00940000165028.a	ENSGT00940000157034	ENSGT00940000157669.a.b	ENSGT00940000155543	ENSGT00940000157582.g	ENSGT00950000183053.A.a.b
Otomorpha	ANCESTRAL SPECIES	109																ENSGT00950000182900.B #22	ENSGT00390000007371.f #23	ENSGT00940000154868.a.b.b	ENSGT00390000016565.g	ENSGT00390000015719.c.c	ENSGT00390000004191	ENSGT00950000183172.B	ENSGT00940000155194.v.b	ENSGT00390000013174	ENSGT00940000156585.c.a	ENSGT00940000165028.a	ENSGT00940000157034	ENSGT00940000157669.b	ENSGT00940000155543	ENSGT00940000157582.g	ENSGT00950000183053.A.a.b
Clupeiformes	ANCESTRAL SPECIES																	ENSGT00950000182900.B #22	ENSGT00390000007371.f #23	ENSGT00940000154868.a.b.b	ENSGT00390000016565.g	ENSGT00390000015719.c.c	ENSGT00390000004191	ENSGT00950000183172.B	ENSGT00940000166269.h	ENSGT00940000155194.v.b	ENSGT00390000013174	ENSGT00940000156585.c.a	ENSGT00940000165028.a	ENSGT00940000157034	ENSGT00940000157669.b	ENSGT00940000155543	ENSGT00940000157582.g
Atlantic herring	MODERN SPECIES	2	NOD1 (ENSCHAG00000015908)	cep162 (ENSCHAG00000015891)	mrap2a (ENSCHAG00000015885)	cyb5r4 (ENSCHAG00000015846)	sim1a (ENSCHAG00000015763)	ASCC3 (ENSCHAG00000015189)	ENSCHAG00000015161	GRIK2 (ENSCHAG00000013969)	HACE1 (ENSCHAG00000013710)	LIN28B (ENSCHAG00000013701)	bves (ENSCHAG00000013628)	popdc3 (ENSCHAG00000013622)	STX12 (ENSCHAG00000013613) #33	ENSCHAG00000013605	fut7 (ENSCHAG00000013598)	wdtc1 (ENSCHAG00000013568) #22	tmem222a (ENSCHAG00000013528) #23	tpbgl (ENSCHAG00000013521)	KDF1 (ENSCHAG00000013512)	nr0b2a (ENSCHAG00000013503)	gpatch3 (ENSCHAG00000013497)	gpn2 (ENSCHAG00000013470)	ENSCHAG00000013222	ARID1A (ENSCHAG00000011660)	pigv (ENSCHAG00000011617)	zdhhc18a (ENSCHAG00000011480)	tent5ba (ENSCHAG00000011459)	tcea3 (ENSCHAG00000011394)	oprd1b (ENSCHAG00000011370)	rcc1 (ENSCHAG00000011153)	phactr4b (ENSCHAG00000011111)
Denticle herring	MODERN SPECIES	15	ENSDCDG00000015962	ENSDCDG00000015963	pitpnc1b (ENSDCDG00000015976)	GRIN2D (ENSDCDG00000015992)	ENSDCDG00000016103	CACNG7 (ENSDCDG00000017307)	CACNG8 (ENSDCDG00000017311)	CACNG6 (ENSDCDG00000017315)	u2af2a (ENSDCDG00000017320)	zgc:92606 (ENSDCDG00000017386)	si:dkey-26c10.5 (ENSDCDG00000017390)	trpv6 (ENSDCDG00000017400)	ENSDCDG00000017412	ENSDCDG00000017440	TRNAU1AP (ENSDCDG00000017920)	wdtc1 (ENSDCDG00000017925) #22	tmem222a (ENSDCDG00000017994) #23	tpbgl (ENSDCDG00000017999)	ENSDCDG00000018002	nr0b2a (ENSDCDG00000018005)	gpatch3 (ENSDCDG00000018012)	gpn2 (ENSDCDG00000018019)	ENSDCDG00000018028	ARID1A (ENSDCDG00000018078)	pigv (ENSDCDG00000018090)	zdhhc18a (ENSDCDG00000018092)	tent5ba (ENSDCDG00000018094)	tcea3 (ENSDCDG00000018104)	oprd1b (ENSDCDG00000018122)	rcc1 (ENSDCDG00000018128)	phactr4b (ENSDCDG00000018248)
Otophysi	ANCESTRAL SPECIES	105	ENSGT00940000168471	ENSGT00390000008744	ENSGT00440000034270.a.b	ENSGT00940000156347.f	ENSGT01060000248575.D.c.b.a.b.b.b.a	ENSGT00650000094921	ENSGT00390000017671.a.b	ENSGT00940000158741	ENSGT00530000063023.B	ENSGT00940000157045.a	ENSGT00940000158728.l	ENSGT00940000166989	ENSGT00940000153704.A.q	ENSGT00940000155141.w.b	ENSGT00940000165015	ENSGT00950000182900.B #22	ENSGT00390000007371.f #23	ENSGT00940000154868.a.b.b	ENSGT00390000016565.g	ENSGT00390000015719.c.c	ENSGT00940000160311.a.a	ENSGT00940000160803	ENSGT00940000159046.C	ENSGT00940000155418.b	ENSGT00940000155539.a.b	ENSGT00390000004140.a	ENSGT00940000173371	ENSGT01100000263573.a.a.a	ENSGT00940000164984	ENSGT00940000157640	ENSGT00940000162584.j
Characiphysae	ANCESTRAL SPECIES	157							ENSGT00940000158741	ENSGT00390000017671.a.b	ENSGT00530000063023.B	ENSGT00940000157045.a	ENSGT00940000158728.l	ENSGT00390000018696	ENSGT00940000153704.A.q	ENSGT00940000155141.w.b	ENSGT00940000165015	ENSGT00950000182900.B #22	ENSGT00390000007371.f #23	ENSGT00940000154868.a.b.b	ENSGT00390000016565.g	ENSGT00390000015719.c.c	ENSGT00940000160311.a.a	ENSGT00940000160803	ENSGT00940000159046.C	ENSGT00940000155418.b	ENSGT00940000155539.a.b	ENSGT00390000004140.a	ENSGT00940000173371	ENSGT01100000263573.a.a.a	ENSGT00940000164984	ENSGT00940000157640	ENSGT00940000162584.j
Channel catfish	MODERN SPECIES	59															Cndp1 (ENSIPUG00000006098)	wdtc1 (ENSIPUG00000006026) #22	tmem222a (ENSIPUG00000006015) #23
Characiphysae_b	ANCESTRAL SPECIES	65	ENSGT00550000074792.b	ENSGT00390000008744	ENSGT00440000034270.a.b	ENSGT00940000156347.f	ENSGT01060000248575.D.c.b.a.b.b.b.a	ENSGT00650000094921	ENSGT00940000158741	ENSGT00390000017671.a.b	ENSGT00530000063023.B	ENSGT00940000157045.a	ENSGT00940000158728.l	ENSGT00390000018696	ENSGT00940000153704.A.q	ENSGT00940000155141.w.b	ENSGT00940000165015	ENSGT00950000182900.B #22	ENSGT00390000007371.f #23	ENSGT00940000154868.a.b.b	ENSGT00390000016565.g	ENSGT00390000015719.c.c	ENSGT00940000160311.a.a	ENSGT00940000160803	ENSGT00940000159046.C	ENSGT00940000155418.b	ENSGT00940000155539.a.b	ENSGT00390000004140.a	ENSGT01100000263535.b.a.b.bb	ENSGT00990000203527.a.a.b	ENSGT00940000164984	ENSGT00940000157640	ENSGT00940000162584.j
Characoidei	ANCESTRAL SPECIES	160				ENSGT01060000248575.D.c.b.a.b.b.b.a	ENSGT00650000094921	ENSGT00940000158741	ENSGT00390000017671.a.b	ENSGT00530000063023.B	ENSGT00950000183116.b.a.b.b	ENSGT00940000157045.a	ENSGT00940000158728.l	ENSGT00390000018696	ENSGT00940000153704.A.q	ENSGT00940000155141.w.b	ENSGT00940000165015	ENSGT00950000182900.B #22	ENSGT00390000007371.f #23	ENSGT00940000154868.a.b.b	ENSGT00390000016565.g	ENSGT00390000015719.c.c	ENSGT00940000160311.a.a	ENSGT00940000160803	ENSGT00940000159046.C	ENSGT00940000155418.b	ENSGT00940000155539.a.b	ENSGT00390000004140.a	ENSGT01100000263535.b.a.b.bb	ENSGT00990000203527.a.a.b	ENSGT01050000244814.a.a.b.b.b.a.a.d.a	ENSGT01100000263535.b.a.b.ab.a	ENSGT00990000203527.a.a.a.e.a.c.a
Red-bellied piranha	MODERN SPECIES	96	ENSPNAG00000027536	ENSPNAG00000027551	pigm (ENSPNAG00000027562)	ENSPNAG00000004243	ANKS6 (ENSPNAG00000027599)	tbx20 (ENSPNAG00000027679)	herpud2 (ENSPNAG00000027698)	dpy19l1l (ENSPNAG00000006615)	ENSPNAG00000027893	SLC4A7 (ENSPNAG00000028100)	eomesb (ENSPNAG00000005104)	cmc1 (ENSPNAG00000028155)	azi2 (ENSPNAG00000006491)	ENSPNAG00000028195	cndp1 (ENSPNAG00000028208)	wdtc1 (ENSPNAG00000028259) #22	tmem222a (ENSPNAG00000028267) #23	tpbgl (ENSPNAG00000028286)	KDF1 (ENSPNAG00000028323)	nr0b2a (ENSPNAG00000028338)	pabpc1a (ENSPNAG00000028408)	ENSPNAG00000028424	ethe1 (ENSPNAG00000004361)	ENSPNAG00000028465	drd2l (ENSPNAG00000006971)	xrcc1 (ENSPNAG00000004392)	ENSPNAG00000004408	ENSPNAG00000004847	ENSPNAG00000028720	ENSPNAG00000028723	ENSPNAG00000006566
Mexicana tetra	MODERN SPECIES	760	ENSAMXG00000043406	ENSAMXG00000036799	ENSAMXG00000040422	ENSAMXG00000037971	ENSAMXG00000032859	eomesb (ENSAMXG00000036691)	ENSAMXG00000040805	ENSAMXG00000020988	ENSAMXG00000043353	ENSAMXG00000039134	eomesb (ENSAMXG00000031106)	CMC1 (ENSAMXG00000038982)	azi2 (ENSAMXG00000036950)	ENSAMXG00000043905	cndp1 (ENSAMXG00000007879)	wdtc1 (ENSAMXG00000007911) #22	tmem222a (ENSAMXG00000043867) #23	tpbgl (ENSAMXG00000041857)	ENSAMXG00000035454	nr0b2a (ENSAMXG00000037118)	NOD1 (ENSAMXG00000008020)	psma6b (ENSAMXG00000043802)	nfkbiaa (ENSAMXG00000009507)	ENSAMXG00000034474
Electric eel	MODERN SPECIES	88	fbl (ENSEEEG00000011575)	kcnj21 (ENSEEEG00000011576)	ppox (ENSEEEG00000011580)	ENSEEEG00000011600	SMARCC1 (ENSEEEG00000011641)	ENSEEEG00000011897	tbx20 (ENSEEEG00000011899)	herpud2 (ENSEEEG00000011907)	dpy19l1l (ENSEEEG00000011914)	SLC4A7 (ENSEEEG00000012049)	eomesb (ENSEEEG00000014167)	CMC1 (ENSEEEG00000014168)	azi2 (ENSEEEG00000014169)	ENSEEEG00000014172	cndp1 (ENSEEEG00000014174)	wdtc1 (ENSEEEG00000014181) #22	tmem222a (ENSEEEG00000014196) #23	tpbgl (ENSEEEG00000014204)	ENSEEEG00000014205	nr0b2a (ENSEEEG00000014208)	ENSEEEG00000014214	ENSEEEG00000014472	ENSEEEG00000014474	ethe1 (ENSEEEG00000014475)	ethe1 (ENSEEEG00000014478)	ENSEEEG00000014479	drd2l (ENSEEEG00000014480)	xrcc1 (ENSEEEG00000014482)	ENSEEEG00000014484	ENSEEEG00000014485	ENSEEEG00000014487
Cyprinoidei	ANCESTRAL SPECIES	91	ENSGT00940000157062	ENSGT00390000010652.A.a.b	ENSGT00940000160806	ENSGT00390000010652.A.a.a	ENSGT00940000160472	ENSGT00940000164559.B	ENSGT01050000244841.A.a.a.a	ENSGT00940000166061.a	ENSGT00730000111346	ENSGT00950000183076.a.b.b.a.b	ENSGT00940000158728.l	ENSGT00940000166989	ENSGT00940000153704.A.q	ENSGT00940000155141.w.b	ENSGT00940000165015	ENSGT00950000182900.B #22	ENSGT00390000007371.f #23	ENSGT00940000154868.a.b.b	ENSGT00390000016565.g	ENSGT00390000015719.c.c	ENSGT00940000160311.a.a	ENSGT00940000160803	ENSGT00940000159046.C	ENSGT01100000263714	ENSGT00940000155539.a.b	ENSGT00390000004140.a	ENSGT00940000173371	ENSGT00940000164984	ENSGT00940000157640	ENSGT00940000162584.j	ENSGT00940000159017.a.a
Cyprininae	DUPLICATION
Cyprininae	DUPLICATION
Cyprininae	DUPLICATION
Cyprininae	ANCESTRAL SPECIES	285	ENSGT00390000015035	ENSGT00510000047412.a.g	ENSGT00940000160219.d	ENSGT00940000154743.A.a.a	ENSGT00390000008859.b.c	ENSGT00940000161506	ENSGT00940000160806	ENSGT00940000157062.e	ENSGT00390000010652.A.a.b	ENSGT00390000010652.A.a.a.t	ENSGT00940000160472	ENSGT01050000244841.A.a.a.a	ENSGT00730000111346	ENSGT00940000153704.A.q.a	ENSGT00940000155141.w.b.o	ENSGT00950000182900.B.a.a.a #22	ENSGT00390000007371.f.b #23	ENSGT00940000154868.a.b.b.a	ENSGT00390000016565.g	ENSGT00390000015719.c.c.b	ENSGT00940000160311.a.a.e.a	ENSGT00940000160803.a	ENSGT00940000159046.C.c	ENSGT01100000263714	ENSGT00940000155539.a.b.j.a	ENSGT00940000159046.C.d	ENSGT00390000004140.a	ENSGT00940000173371	ENSGT00940000164984	ENSGT00940000157640.f.a	ENSGT00940000159017.a.a.c
Cyprininae_a	ANCESTRAL SPECIES	343	ENSGT00510000047412.a.g	ENSGT00940000160219.d	ENSGT00940000154743.A.a.a	ENSGT00390000008859.b.c	ENSGT00940000161506	ENSGT00940000160806	ENSGT00940000157062.e	ENSGT00390000010652.A.a.a.t	ENSGT00940000160472	ENSGT01090000260029.a.b.b.b.a.a.b.b.b.b.b.b.a.a.a.a.a.b.a	ENSGT00940000164559.B.f	ENSGT01050000244841.A.a.a.a	ENSGT00730000111346	ENSGT00940000153704.A.q.a	ENSGT00940000155141.w.b.o	ENSGT00950000182900.B.a.a.a #22	ENSGT00390000007371.f.b #23	ENSGT00940000154868.a.b.b.a	ENSGT00390000016565.g.h	ENSGT00390000015719.c.c.a	ENSGT00940000160311.a.a.e.b	ENSGT00940000160311.a.a.f	ENSGT00940000160803.b
Common carp reference	MODERN SPECIES	2	ENSCCRG00000064520	ENSCCRG00000054133	ENSCCRG00000073668	ENSCCRG00000080060	ENSCCRG00000070273	ENSCCRG00000004086	CREB3L4 (ENSCCRG00000066761)	ENSCCRG00000074401	DENND4B (ENSCCRG00000071966)	ENSCCRG00000053871	ENSCCRG00000043277	ENSCCRG00000043291	eomesb (ENSCCRG00000017496)	azi2 (ENSCCRG00000057770)	ENSCCRG00000061535	wdtc1 (ENSCCRG00000001239) #22	tmem222a (ENSCCRG00000001428) #23	tpbgl (ENSCCRG00000057728)	ENSCCRG00000001465	nr0b2a (ENSCCRG00000062546)	pabpc1a (ENSCCRG00000033542)	ethe1 (ENSCCRG00000033435)	xrcc1 (ENSCCRG00000077002)	ENSCCRG00000014536	cdk14 (ENSCCRG00000064355)	ENSCCRG00000058950	ENSCCRG00000041782	ENSCCRG00000028445	ENSCCRG00000057116	fzd1 (ENSCCRG00000005153)	znrf2b (ENSCCRG00000081855)
Goldfish	MODERN SPECIES	35	zbtb7b (ENSCARG00000054928)	ENSCARG00000054845	pklr (ENSCARG00000054302)	cyp11c1 (ENSCARG00000053897)	CREB3L4 (ENSCARG00000053883)	SLC39A1 (ENSCARG00000053878)	ENSCARG00000053860	DENND4B (ENSCARG00000053641)	ENSCARG00000053592	ENSCARG00000053518	ENSCARG00000053437	ENSCARG00000053413	ENSCARG00000059012	azi2 (ENSCARG00000059004)	ENSCARG00000058982	wdtc1 (ENSCARG00000058941) #22	tmem222a (ENSCARG00000058910) #23	tpbgl (ENSCARG00000058896)	ENSCARG00000058886	nr0b2a (ENSCARG00000058861)	pabpc1a (ENSCARG00000058542)	ENSCARG00000058531	ENSCARG00000058516	ENSCARG00000058509	drd2l (ENSCARG00000058488)	ENSCARG00000058447	ENSCARG00000058422	ENSCARG00000058410	ENSCARG00000058365	cdk14 (ENSCARG00000058284)	fzd1 (ENSCARG00000058271)
Cyprininae	ANCESTRAL SPECIES																	ENSGT00950000182900.B.a.a.b #22
Goldfish	MODERN SPECIES	7	ENSCARG00000002245	DENND4B (ENSCARG00000002069)	ENSCARG00000002012	ENSCARG00000001990	ENSCARG00000001982	ENSCARG00000020503	ENSCARG00000020450	ENSCARG00000020434	iqgap3 (ENSCARG00000009034)	eomesb (ENSCARG00000008583)	cmc1 (ENSCARG00000008570)	ENSCARG00000008565	azi2 (ENSCARG00000008557)	ENSCARG00000008547	cndp1 (ENSCARG00000006732)	wdtc1 (ENSCARG00000006598) #22	tmem222a (ENSCARG00000006560) #23	tpbgl (ENSCARG00000006526)	KDF1 (ENSCARG00000006515)	nr0b2a (ENSCARG00000006500)	pabpc1a (ENSCARG00000006050)	ENSCARG00000006004	PHLDB3 (ENSCARG00000005986)	ethe1 (ENSCARG00000005955)	ENSCARG00000005940	xrcc1 (ENSCARG00000005893)	ENSCARG00000005872	ENSCARG00000005868	ENSCARG00000005857	ENSCARG00000005838	cdk14 (ENSCARG00000005144)
Cyprininae	ANCESTRAL SPECIES																	ENSGT00950000182900.B.a.b #22
Cyprininae_a	ANCESTRAL SPECIES																	ENSGT00950000182900.B.a.b #22
Golden-line barbel	MODERN SPECIES	1811															ENSSGRG00000018738	wdtc1 (ENSSGRG00000018742) #22	tmem222a (ENSSGRG00000018844) #23	tpbgl (ENSSGRG00000018845)	tpbgl (ENSSGRG00000018846)	ENSSGRG00000018847	pabpc1a (ENSSGRG00000018863)	ENSSGRG00000019560
Cyprininae	ANCESTRAL SPECIES	737								ENSGT00940000164559.B	ENSGT00940000166061.a	ENSGT00950000183076.a.b.b.a.b	ENSGT00940000158728.l	ENSGT00940000166989	ENSGT00940000153704.A.q.b	ENSGT00940000155141.w.b.p	ENSGT00940000165015	ENSGT00950000182900.B.b #22	ENSGT00390000007371.f.a #23	ENSGT00940000154868.a.b.b.b
Cyprininae_a	ANCESTRAL SPECIES	404										ENSGT00950000183076.a.b.b.a.b	ENSGT00940000158728.l	ENSGT00940000166989	ENSGT00940000153704.A.q.b	ENSGT00940000155141.w.b.p	ENSGT00940000165015	ENSGT00950000182900.B.b #22	ENSGT00390000007371.f.a #23	ENSGT00940000154868.a.b.b.b	ENSGT00390000016565.g.g	ENSGT00390000015719.c.c.b	ENSGT00940000160311.a.a.e.a	ENSGT00940000160803.a	ENSGT00940000159046.C.c	ENSGT00940000159046.C.d	ENSGT00390000004140.a	ENSGT00940000173371	ENSGT00940000164984	ENSGT00940000157640.f.a	ENSGT01090000260029.a.b.b.b.a.a.b.b.b.b.b.b.a.a.b.a.a	ENSGT00940000162584.j	ENSGT00940000159017.a.a.c
Common carp reference	MODERN SPECIES	47	ENSCCRG00000080775	ENSCCRG00000063406	ENSCCRG00000003135	ENSCCRG00000075267	ENSCCRG00000021417	ENSCCRG00000069116	ENSCCRG00000065514	ENSCCRG00000055145	ENSCCRG00000077715	ENSCCRG00000070223	eomesb (ENSCCRG00000003431)	cmc1 (ENSCCRG00000076867)	azi2 (ENSCCRG00000050867)	ENSCCRG00000059078	cndp1 (ENSCCRG00000012165)	wdtc1 (ENSCCRG00000076999) #22	tmem222a (ENSCCRG00000033459) #23	tpbgl (ENSCCRG00000074889)	ENSCCRG00000033476	nr0b2a (ENSCCRG00000033486)	pabpc1a (ENSCCRG00000033428)	ENSCCRG00000070879	PHLDB3 (ENSCCRG00000032388)	ethe1 (ENSCCRG00000079750)	ENSCCRG00000032408	xrcc1 (ENSCCRG00000058607)	ENSCCRG00000076089	cdk14 (ENSCCRG00000056799)	ENSCCRG00000079497	znrf2b (ENSCCRG00000058383)	ggctb (ENSCCRG00000055804)
Golden-line barbel	MODERN SPECIES	1506											eomesb (ENSSGRG00000018160)	cmc1 (ENSSGRG00000018158)	azi2 (ENSSGRG00000018157)	ENSSGRG00000018156	cndp1 (ENSSGRG00000018099)	wdtc1 (ENSSGRG00000018063) #22	tmem222a (ENSSGRG00000018060) #23	tpbgl (ENSSGRG00000018059)	ENSSGRG00000018058	nr0b2a (ENSSGRG00000018047)
Zebrafish	MODERN SPECIES	7										iqgap3 (ENSDARG00000098650)	eomesb (ENSDARG00000104243)	cmc1 (ENSDARG00000103670)	azi2 (ENSDARG00000102419)	ENSDARG00000077559	cndp1 (ENSDARG00000069583)	wdtc1 (ENSDARG00000059760) #22	tmem222a (ENSDARG00000069589) #23	tpbgl (ENSDARG00000114338)	ENSDARG00000079834	nr0b2a (ENSDARG00000044685)	pabpc1a (ENSDARG00000017219)	zbtb7b (ENSDARG00000021891)	khdc4 (ENSDARG00000035023)	malsu1 (ENSDARG00000091079)	ENSDARG00000102438	ENSDARG00000102087	fbxo43 (ENSDARG00000104186)	spag1b (ENSDARG00000069499)	DENND4B (ENSDARG00000102914)	fzd6 (ENSDARG00000104874)	clk2b (ENSDARG00000059870)
Euteleosteomorpha	ANCESTRAL SPECIES	185														ENSGT00520000055567.b	ENSGT00620000087993.a.b	ENSGT00950000182900.B #22	ENSGT00390000007371.f #23	ENSGT00940000154868.a.b.b	ENSGT00390000016565.g	ENSGT00390000015719.c.c	ENSGT00390000004191	ENSGT00950000183172.B	ENSGT00940000155194.v.b	ENSGT00390000013174	ENSGT00940000156585.c.a	ENSGT00940000165028.a	ENSGT00940000157034	ENSGT00940000157669.a.b	ENSGT00940000155543	ENSGT00940000157582.g	ENSGT00950000183053.A.a.b
Acanthomorphata	ANCESTRAL SPECIES	31								ENSGT00940000159019	ENSGT00390000015114	ENSGT00390000009719	ENSGT00390000010209.c.b	ENSGT00950000183186.B.b.c	ENSGT00390000017627.a.a.b	ENSGT00520000055567.b	ENSGT00620000087993.a.b	ENSGT00950000182900.B #22	ENSGT00390000007371.f #23	ENSGT00940000154868.a.b.b	ENSGT00390000016565.g	ENSGT00390000015719.c.c	ENSGT00390000004191	ENSGT00950000183172.B	ENSGT00940000155194.v.b	ENSGT00390000013174	ENSGT00940000156585.c.a	ENSGT00940000165028.a	ENSGT00940000157034	ENSGT00940000157669.a.b	ENSGT00940000155543	ENSGT00940000157582.g	ENSGT00950000183053.A.a.b
Euacanthomorphacea	ANCESTRAL SPECIES		ENSGT00390000009988	ENSGT00940000157222.b	ENSGT00390000018110	ENSGT00390000017400	ENSGT00390000001515	ENSGT00940000153769.F.n	ENSGT00520000055667	ENSGT00940000159019	ENSGT00390000015114	ENSGT00390000009719	ENSGT00390000010209.c.b	ENSGT00950000183186.B.b.c	ENSGT00390000017627.a.a.b	ENSGT00520000055567.b	ENSGT00620000087993.a.b	ENSGT00950000182900.B #22	ENSGT00390000007371.f #23	ENSGT00940000154868.a.b.b	ENSGT00390000016565.g	ENSGT00390000015719.c.c	ENSGT00390000004191	ENSGT00950000183172.B	ENSGT00940000155194.v.b	ENSGT00390000013174	ENSGT00940000156585.c.a	ENSGT00940000165028.a	ENSGT00940000157034	ENSGT00940000157669.a.b	ENSGT00940000155543	ENSGT00940000157582.g	ENSGT00950000183053.A.a.b
Percomorphaceae	ANCESTRAL SPECIES		ENSGT00390000009988	ENSGT00940000157222.b	ENSGT00390000018110	ENSGT00390000017400	ENSGT00390000001515	ENSGT00940000153769.F.n	ENSGT00520000055667	ENSGT00940000159019	ENSGT00390000015114	ENSGT00390000009719	ENSGT00390000010209.c.b	ENSGT00950000183186.B.b.c	ENSGT00390000017627.a.a.b	ENSGT00520000055567.b	ENSGT00620000087993.a.b	ENSGT00950000182900.B #22	ENSGT00390000007371.f #23	ENSGT00940000154868.a.b.b	ENSGT00390000016565.g	ENSGT00390000015719.c.c	ENSGT00390000004191	ENSGT00950000183172.B	ENSGT00940000155194.v.b	ENSGT00390000013174	ENSGT00940000156585.c.a	ENSGT00940000165028.a	ENSGT00940000157034	ENSGT00940000157669.a.b	ENSGT00940000155543	ENSGT00940000157582.g	ENSGT00950000183053.A.a.b
Percomorphaceae_B	ANCESTRAL SPECIES	1	ENSGT00940000157222.b	ENSGT00390000018110	ENSGT00390000017400	ENSGT00390000001515	ENSGT00940000153769.F.n	ENSGT00520000055667	ENSGT00940000159019	ENSGT00390000015114	ENSGT00390000009719	ENSGT00390000010209.c.b	ENSGT00950000183186.B.b.c	ENSGT00390000017627.a.a.b	ENSGT00940000178119	ENSGT00520000055567.b	ENSGT00620000087993.a.b	ENSGT00950000182900.B #22	ENSGT00390000007371.f #23	ENSGT00940000154868.a.b.b	ENSGT00390000016565.g	ENSGT00390000015719.c.c	ENSGT00390000004191	ENSGT00950000183172.B	ENSGT00940000155194.v.b	ENSGT00390000013174	ENSGT00940000156585.c.a	ENSGT00940000165028.a	ENSGT00940000157034	ENSGT00940000157669.a.b	ENSGT00940000155543	ENSGT00940000157582.g	ENSGT00950000183053.A.a.b
Ovalentaria	ANCESTRAL SPECIES	3	ENSGT00940000157222.b	ENSGT00390000018110	ENSGT00390000017400	ENSGT00390000001515	ENSGT00940000153769.F.n	ENSGT00520000055667	ENSGT00940000159019	ENSGT00390000015114	ENSGT00390000009719	ENSGT00390000010209.c.b	ENSGT00950000183186.B.b.c	ENSGT00390000017627.a.a.b	ENSGT00940000178119	ENSGT00520000055567.b	ENSGT00620000087993.a.b	ENSGT00950000182900.B #22	ENSGT00390000007371.f #23	ENSGT00940000154868.a.b.b	ENSGT00390000016565.g	ENSGT00390000015719.c.c	ENSGT00390000004191	ENSGT00950000183172.B	ENSGT00940000155194.v.b	ENSGT00390000013174	ENSGT00940000156585.c.a	ENSGT00940000165028.a	ENSGT00940000157034	ENSGT00940000157669.a.b	ENSGT00940000155543	ENSGT00940000157582.g	ENSGT00950000183053.A.a.b
Atherinomorphae	ANCESTRAL SPECIES		ENSGT00940000157222.b	ENSGT00390000018110	ENSGT00390000017400	ENSGT00390000001515	ENSGT00940000153769.F.n	ENSGT00520000055667	ENSGT00940000159019	ENSGT00390000015114	ENSGT00390000009719	ENSGT00390000010209.c.b	ENSGT00950000183186.B.b.c	ENSGT00390000017627.a.a.b	ENSGT00940000178119	ENSGT00520000055567.b	ENSGT00620000087993.a.b	ENSGT00950000182900.B #22	ENSGT00390000007371.f #23	ENSGT00940000154868.a.b.b	ENSGT00390000016565.g	ENSGT00390000015719.c.c	ENSGT00390000004191	ENSGT00950000183172.B	ENSGT00940000155194.v.b	ENSGT00390000013174	ENSGT00940000156585.c.a	ENSGT00940000165028.a	ENSGT00940000157034	ENSGT00940000157669.a.b	ENSGT00940000155543	ENSGT00940000157582.g	ENSGT00950000183053.A.a.b
Cyprinodontiformes	ANCESTRAL SPECIES		ENSGT00940000157222.b	ENSGT00390000018110	ENSGT00390000017400	ENSGT00390000001515	ENSGT00940000153769.F.n	ENSGT00520000055667	ENSGT00940000159019	ENSGT00390000015114	ENSGT00390000009719	ENSGT00390000010209.c.b	ENSGT00950000183186.B.b.c	ENSGT00390000017627.a.a.b	ENSGT00940000178119	ENSGT00520000055567.b	ENSGT00620000087993.a.b	ENSGT00950000182900.B #22	ENSGT00390000007371.f #23	ENSGT00940000154868.a.b.b	ENSGT00390000016565.g	ENSGT00390000015719.c.c	ENSGT00390000004191	ENSGT00950000183172.B	ENSGT00940000155194.v.b	ENSGT00390000013174	ENSGT00940000156585.c.a	ENSGT00940000165028.a	ENSGT00940000157034	ENSGT00940000157669.a.b	ENSGT00940000155543	ENSGT00940000157582.g	ENSGT00950000183053.A.a.b
Aplocheiloidei	ANCESTRAL SPECIES	83							ENSGT00520000055667	ENSGT00940000159019	ENSGT00390000015114	ENSGT00390000009719	ENSGT00390000010209.c.b	ENSGT00950000183186.B.b.c	ENSGT00390000017627.a.a.b	ENSGT00520000055567.b	ENSGT00620000087993.a.b	ENSGT00950000182900.B #22	ENSGT00390000007371.f #23	ENSGT00940000154868.a.b.b	ENSGT00390000016565.g	ENSGT00390000015719.c.c	ENSGT00390000004191	ENSGT00950000183172.B	ENSGT00940000155194.v.b	ENSGT00390000013174	ENSGT00940000156585.c.a	ENSGT00940000165028.a	ENSGT00940000157034	ENSGT00940000157669.a.b	ENSGT00940000155543	ENSGT00940000157582.g	ENSGT00950000183053.A.a.b
Mangrove rivulus	MODERN SPECIES	402								deptor (ENSKMAG00000020928)	LIMD1 (ENSKMAG00000020912)	lars2 (ENSKMAG00000020875)	TMEM158 (ENSKMAG00000020865)	CLEC3B (ENSKMAG00000020857)	ENSKMAG00000020849	ENSKMAG00000020836	CEP85 (ENSKMAG00000020811)	wdtc1 (ENSKMAG00000020782) #22	tmem222a (ENSKMAG00000020767) #23	tpbgl (ENSKMAG00000020751)	ENSKMAG00000020738	nr0b2a (ENSKMAG00000020730)	gpatch3 (ENSKMAG00000020717)	gpn2 (ENSKMAG00000020696)	ARID1A (ENSKMAG00000020627)	pigv (ENSKMAG00000020611)	zdhhc18a (ENSKMAG00000020602)	ENSKMAG00000020593
Turquoise killifish	MODERN SPECIES	29					COX20 (ENSNFUG00015014283)	ENSNFUG00015014259	deptor (ENSNFUG00015014220)	LIMD1 (ENSNFUG00015014106)	LARS2 (ENSNFUG00015022107)	TMEM158 (ENSNFUG00015022097)	cdcp1a (ENSNFUG00015022084)	CLEC3BA (ENSNFUG00015022077)	ENSNFUG00015022074	ENSNFUG00015022071	CEP85 (ENSNFUG00015022060)	wdtc1 (ENSNFUG00015021980) #22
Cyprinodontoidei	ANCESTRAL SPECIES		ENSGT00940000157222.b	ENSGT00390000018110	ENSGT00390000017400	ENSGT00390000001515	ENSGT00940000153769.F.n	ENSGT00520000055667	ENSGT00940000159019	ENSGT00390000015114	ENSGT00390000009719	ENSGT00390000010209.c.b	ENSGT00950000183186.B.b.c	ENSGT00390000017627.a.a.b	ENSGT00940000178119	ENSGT00520000055567.b	ENSGT00620000087993.a.b	ENSGT00950000182900.B #22	ENSGT00390000007371.f #23	ENSGT00940000154868.a.b.b	ENSGT00390000016565.g	ENSGT00390000015719.c.c	ENSGT00390000004191	ENSGT00950000183172.B	ENSGT00940000155194.v.b	ENSGT00390000013174	ENSGT00940000156585.c.a	ENSGT00940000165028.a	ENSGT00940000157034	ENSGT00940000157669.a.b	ENSGT00940000155543	ENSGT00940000157582.g	ENSGT00950000183053.A.a.b
Poeciliinae	ANCESTRAL SPECIES	22	ENSGT00940000157222.b	ENSGT00390000018110	ENSGT00390000017400	ENSGT00390000001515	ENSGT00940000153769.F.n	ENSGT00520000055667.j	ENSGT00940000159019	ENSGT00390000015114	ENSGT00390000009719	ENSGT00390000010209.c.b	ENSGT00950000183186.B.b.c	ENSGT00390000017627.a.a.b	ENSGT00940000178119	ENSGT00520000055567.b	ENSGT00620000087993.a.b	ENSGT00950000182900.B #22	ENSGT00390000007371.f #23	ENSGT00940000154868.a.b.b	ENSGT00390000016565.g	ENSGT00390000015719.c.c	ENSGT00390000004191	ENSGT00950000183172.B	ENSGT00940000155194.v.b	ENSGT00390000013174	ENSGT00940000156585.c.a	ENSGT00940000165028.a	ENSGT00940000157034	ENSGT00940000157669.a.b	ENSGT00940000155543	ENSGT00940000157582.g	ENSGT00950000183053.A.a.b
Poecilia	ANCESTRAL SPECIES		ENSGT00940000157222.b	ENSGT00390000018110	ENSGT00390000017400	ENSGT00390000001515	ENSGT00940000153769.F.n	ENSGT00520000055667.j	ENSGT00940000159019	ENSGT00390000015114	ENSGT00390000009719	ENSGT00390000010209.c.b	ENSGT00950000183186.B.b.c	ENSGT00390000017627.a.a.b	ENSGT00940000178119	ENSGT00520000055567.b	ENSGT00620000087993.a.b	ENSGT00950000182900.B #22	ENSGT00390000007371.f #23	ENSGT00940000154868.a.b.b	ENSGT00390000016565.g	ENSGT00390000015719.c.c	ENSGT00390000004191	ENSGT00950000183172.B	ENSGT00940000155194.v.b	ENSGT00390000013174	ENSGT00940000156585.c.a	ENSGT00940000165028.a	ENSGT00940000157034	ENSGT00940000157669.a.b	ENSGT00940000155543	ENSGT00940000157582.g	ENSGT00950000183053.A.a.b
NAME_6	ANCESTRAL SPECIES	33											ENSGT00950000183186.B.b.c	ENSGT00390000017627.a.a.b	ENSGT00940000178119	ENSGT00520000055567.b	ENSGT00620000087993.a.b	ENSGT00950000182900.B #22	ENSGT00390000007371.f #23	ENSGT00940000154868.a.b.b	ENSGT00390000016565.g	ENSGT00390000015719.c.c	ENSGT00390000004191	ENSGT00950000183172.B	ENSGT00940000155194.v.b	ENSGT00390000013174	ENSGT00940000156585.c.a	ENSGT00940000165028.a	ENSGT00940000157034	ENSGT00940000157669.a.b	ENSGT00940000155543	ENSGT00940000157582.g	ENSGT00950000183053.A.a.b
Amazon molly	MODERN SPECIES	356												CLEC3B (ENSPFOG00000010480)	ENSPFOG00000010385	ENSPFOG00000010297	CEP85 (ENSPFOG00000010149)	wdtc1 (ENSPFOG00000010064) #22	tmem222a (ENSPFOG00000024525) #23	tpbgl (ENSPFOG00000010019)	ENSPFOG00000009998	nr0b2a (ENSPFOG00000009983)	gpatch3 (ENSPFOG00000009928)	gpn2 (ENSPFOG00000009873)	ARID1A (ENSPFOG00000009717)	pigv (ENSPFOG00000009699)	zdhhc18a (ENSPFOG00000009674)	zdhhc18a (ENSPFOG00000009592)	tent5ba (ENSPFOG00000009565)	tcea3 (ENSPFOG00000009554)	oprd1b (ENSPFOG00000009504)	rcc1 (ENSPFOG00000009381)	phactr4b (ENSPFOG00000009292)
Sailfin molly	MODERN SPECIES	1584											CLEC3B (ENSPLAG00000000551)	ENSPLAG00000023470	ENSPLAG00000023480	ENSPLAG00000023534	CEP85 (ENSPLAG00000023545)	wdtc1 (ENSPLAG00000023641) #22	tmem222a (ENSPLAG00000023674) #23	tpbgl (ENSPLAG00000023728)	ENSPLAG00000023772	nr0b2a (ENSPLAG00000023778)	gpatch3 (ENSPLAG00000023784)	gpn2 (ENSPLAG00000023795)	ARID1A (ENSPLAG00000001799)	pigv (ENSPLAG00000001806)	zdhhc18a (ENSPLAG00000001823)
Guppy	MODERN SPECIES	446	MRS2 (ENSPREG00000009590)	ENSPREG00000009583	CPQ (ENSPREG00000009554)	dscc1 (ENSPREG00000009531)	mrpl13 (ENSPREG00000009510)	COL14A1 (ENSPREG00000009434)	deptor (ENSPREG00000009382)	LIMD1 (ENSPREG00000009359)	lars2 (ENSPREG00000009319)	TMEM158 (ENSPREG00000009299)	ENSPREG00000009288	CLEC3B (ENSPREG00000009257)	ENSPREG00000009238	ENSPREG00000009137	CEP85 (ENSPREG00000009036)	wdtc1 (ENSPREG00000008983) #22	tmem222a (ENSPREG00000008949) #23	tpbgl (ENSPREG00000008925)	ENSPREG00000008900	nr0b2a (ENSPREG00000008891)	gpatch3 (ENSPREG00000008873)	gpn2 (ENSPREG00000008794)	ARID1A (ENSPREG00000008684)	pigv (ENSPREG00000008663)	zdhhc18a (ENSPREG00000008633)	tent5ba (ENSPREG00000008620)	tcea3 (ENSPREG00000008483)	oprd1b (ENSPREG00000008437)	rcc1 (ENSPREG00000008415)	phactr4b (ENSPREG00000008357)	ENSPREG00000008322
Platyfish	MODERN SPECIES	17	ENSXMAG00000030035	MRS2 (ENSXMAG00000010869)	ENSXMAG00000022167	CPQ (ENSXMAG00000010857)	dscc1 (ENSXMAG00000010847)	mrpl13 (ENSXMAG00000010846)	COL14A1 (ENSXMAG00000010834)	deptor (ENSXMAG00000010825)	LIMD1 (ENSXMAG00000010818)	lars2 (ENSXMAG00000010803)	TMEM158 (ENSXMAG00000022005)	CLEC3B (ENSXMAG00000010802)	ENSXMAG00000010800	ENSXMAG00000023555	CEP85 (ENSXMAG00000010776)	wdtc1 (ENSXMAG00000010763) #22	tmem222a (ENSXMAG00000028549) #23	tpbgl (ENSXMAG00000019082)	ENSXMAG00000023100	nr0b2a (ENSXMAG00000010556)	gpatch3 (ENSXMAG00000010749)	gpn2 (ENSXMAG00000010742)	ARID1A (ENSXMAG00000010716)	pigv (ENSXMAG00000010711)	zdhhc18a (ENSXMAG00000028647)	tent5ba (ENSXMAG00000010694)	tcea3 (ENSXMAG00000010685)	oprd1b (ENSXMAG00000015741)	rcc1 (ENSXMAG00000010657)	phactr4b (ENSXMAG00000010649)	ENSXMAG00000010648
NAME_4	ANCESTRAL SPECIES	86	ENSGT00390000009988	ENSGT00940000157222.b	ENSGT00390000018110	ENSGT00390000017400	ENSGT00390000001515	ENSGT00940000153769.F.n	ENSGT00520000055667	ENSGT00940000159019	ENSGT00390000015114	ENSGT00390000009719	ENSGT00390000010209.c.b	ENSGT00950000183186.B.b.c	ENSGT00390000017627.a.a.b	ENSGT00520000055567.b	ENSGT00620000087993.a.b	ENSGT00950000182900.B #22	ENSGT00390000007371.f #23	ENSGT00940000154868.a.b.b	ENSGT00390000016565.g	ENSGT00390000015719.c.c	ENSGT00390000004191	ENSGT00950000183172.B	ENSGT00940000155194.v.b	ENSGT00390000013174	ENSGT00940000156585.c.a	ENSGT00940000165028.a	ENSGT00940000157034	ENSGT00940000157669.a.b	ENSGT00940000155543	ENSGT00940000157582.g	ENSGT00950000183053.A.a.b
Mummichog	MODERN SPECIES	482												CLEC3B (ENSFHEG00000014870)	ENSFHEG00000014962	ENSFHEG00000014977	CEP85 (ENSFHEG00000014993)	wdtc1 (ENSFHEG00000015111) #22	tmem222a (ENSFHEG00000000826) #23	ENSFHEG00000015203	KDF1 (ENSFHEG00000015211)	nr0b2a (ENSFHEG00000015222)	gpatch3 (ENSFHEG00000015264)	gpn2 (ENSFHEG00000015292)	ARID1A (ENSFHEG00000015486)	pigv (ENSFHEG00000015501)	zdhhc18a (ENSFHEG00000015541)	tent5ba (ENSFHEG00000015561)	tcea3 (ENSFHEG00000015602)	oprd1b (ENSFHEG00000016732)	rcc1 (ENSFHEG00000016809)	phactr4b (ENSFHEG00000016831)	ENSFHEG00000016838
Sheepshead minnow	MODERN SPECIES	333	ENSCVAG00000019489	MRS2 (ENSCVAG00000019496)	ENSCVAG00000019505	CPQ (ENSCVAG00000019539)	dscc1 (ENSCVAG00000019580)	mrpl13 (ENSCVAG00000019608)	COL14A1 (ENSCVAG00000019722)	deptor (ENSCVAG00000019760)	LIMD1 (ENSCVAG00000019769)	lars2 (ENSCVAG00000019899)	TMEM158 (ENSCVAG00000019910)	CLEC3B (ENSCVAG00000019917)	ENSCVAG00000019948	ENSCVAG00000019975	CEP85 (ENSCVAG00000019986)	wdtc1 (ENSCVAG00000020036) #22	tmem222a (ENSCVAG00000020041) #23	tpbgl (ENSCVAG00000020093)	KDF1 (ENSCVAG00000020102)	nr0b2a (ENSCVAG00000020110)	gpatch3 (ENSCVAG00000000827)	gpn2 (ENSCVAG00000020134)	ARID1A (ENSCVAG00000020151)	pigv (ENSCVAG00000020161)	zdhhc18a (ENSCVAG00000020173)	tent5ba (ENSCVAG00000020190)	tcea3 (ENSCVAG00000020222)	oprd1b (ENSCVAG00000020248)	rcc1 (ENSCVAG00000020283)	phactr4b (ENSCVAG00000020350)	ENSCVAG00000020375
Oryzias	ANCESTRAL SPECIES	2	ENSGT00530000063461.A.a	ENSGT00390000009988	ENSGT00940000157222.b	ENSGT00390000018110	ENSGT00390000017400	ENSGT00390000001515	ENSGT00940000153769.F.n	ENSGT00520000055667	ENSGT00940000159019.l	ENSGT00390000015114	ENSGT00390000009719	ENSGT00950000183186.B.b.c	ENSGT00390000017627.a.a.b	ENSGT00520000055567.b	ENSGT00620000087993.a.b	ENSGT00950000182900.B #22	ENSGT00390000007371.f #23	ENSGT00940000154868.a.b.b	ENSGT00390000016565.g	ENSGT00390000015719.c.c	ENSGT00390000004191	ENSGT00950000183172.B	ENSGT00940000155194.v.b	ENSGT00390000013174	ENSGT00940000156585.c.a	ENSGT00940000165028.a	ENSGT00940000157034	ENSGT00940000157669.a.b	ENSGT00940000155543	ENSGT00940000157582.g	ENSGT00950000183053.A.a.b
Oryzias_b	ANCESTRAL SPECIES	1	ENSGT00530000063461.A.a	ENSGT00390000009988	ENSGT00940000157222.b	ENSGT00390000018110	ENSGT00390000017400	ENSGT00390000001515	ENSGT00940000153769.F.n	ENSGT00520000055667	ENSGT00940000159019.l	ENSGT00390000015114	ENSGT00390000009719	ENSGT00950000183186.B.b.c	ENSGT00390000017627.a.a.b	ENSGT00520000055567.b	ENSGT00620000087993.a.b	ENSGT00950000182900.B #22	ENSGT00390000007371.f #23	ENSGT00940000154868.a.b.b	ENSGT00390000016565.g	ENSGT00390000015719.c.c	ENSGT00390000004191	ENSGT00950000183172.B	ENSGT00940000155194.v.b	ENSGT00390000013174	ENSGT00940000156585.c.a	ENSGT00940000165028.a	ENSGT00940000157034	ENSGT00940000157669.a.b	ENSGT00940000155543	ENSGT00940000157582.g	ENSGT00950000183053.A.a.b
Indian medaka	MODERN SPECIES	5	MRS2 (ENSOMEG00000011853)	ENSOMEG00000011802	ENSOMEG00000011783	dscc1 (ENSOMEG00000011757)	mrpl13 (ENSOMEG00000011732)	COL14A1 (ENSOMEG00000011696)	deptor (ENSOMEG00000011556)	LIMD1 (ENSOMEG00000011521)	lars2 (ENSOMEG00000011491)	TMEM158 (ENSOMEG00000011417)	CLEC3B (ENSOMEG00000011407)	ENSOMEG00000011391	ENSOMEG00000011378	CEP85 (ENSOMEG00000011339)	ENSOMEG00000011310	wdtc1 (ENSOMEG00000011235) #22	tmem222a (ENSOMEG00000011094) #23	tpbgl (ENSOMEG00000011052)	ENSOMEG00000011011	nr0b2a (ENSOMEG00000011004)	gpatch3 (ENSOMEG00000010991)	gpn2 (ENSOMEG00000010953)	ARID1A (ENSOMEG00000010910)	pigv (ENSOMEG00000010858)	zdhhc18a (ENSOMEG00000010825)	tent5ba (ENSOMEG00000010794)	tcea3 (ENSOMEG00000010764)	oprd1b (ENSOMEG00000010711)	rcc1 (ENSOMEG00000010687)	phactr4b (ENSOMEG00000010621)	ENSOMEG00000010505
Javanese ricefish	MODERN SPECIES	7	ENSOJAG00000010177	MRS2 (ENSOJAG00000009982)	ENSOJAG00000009966	CPQ (ENSOJAG00000009529)	dscc1 (ENSOJAG00000009392)	mrpl13 (ENSOJAG00000009285)	COL14A1 (ENSOJAG00000007654)	deptor (ENSOJAG00000007415)	LIMD1 (ENSOJAG00000007396)	lars2 (ENSOJAG00000019013)	TMEM158 (ENSOJAG00000018976)	CLEC3B (ENSOJAG00000018912)	ENSOJAG00000018868	ENSOJAG00000018856	CEP85 (ENSOJAG00000018845)	wdtc1 (ENSOJAG00000018357) #22	tmem222a (ENSOJAG00000018312) #23	tpbgl (ENSOJAG00000018305)	ENSOJAG00000018298	nr0b2a (ENSOJAG00000018286)	gpatch3 (ENSOJAG00000018279)	gpn2 (ENSOJAG00000018270)	pigv (ENSOJAG00000018177)	zdhhc18a (ENSOJAG00000018158)	tent5ba (ENSOJAG00000018129)	ENSOJAG00000018118	oprd1b (ENSOJAG00000017898)	rcc1 (ENSOJAG00000017774)	ENSOJAG00000017733	ENSOJAG00000017705	ENSOJAG00000017691
Oryzias_a	ANCESTRAL SPECIES	9	ENSGT00940000155113.a.b	ENSGT00530000063461.A.a	ENSGT00390000009988	ENSGT00940000157222.b	ENSGT00390000018110	ENSGT00390000017400	ENSGT00390000001515	ENSGT00940000153769.F.n	ENSGT00520000055667	ENSGT00940000159019.l	ENSGT00390000015114	ENSGT00390000009719	ENSGT00950000183186.B.b.c	ENSGT00390000017627.a.a.b	ENSGT00620000087993.a.b	ENSGT00950000182900.B #22	ENSGT00390000007371.f #23	ENSGT00940000154868.a.b.b	ENSGT00390000016565.g	ENSGT00390000015719.c.c	ENSGT00390000004191	ENSGT00950000183172.B	ENSGT00940000155194.v.b	ENSGT00390000013174	ENSGT00940000156585.c.a	ENSGT00940000165028.a	ENSGT00940000157034	ENSGT01030000234510.a.a.a.a.a.a	ENSGT01030000234510.a.a.b	ENSGT00940000155721.b.b	ENSGT00390000012690.a
Chinese medaka	MODERN SPECIES	4819																wdtc1 (ENSOSIG00000012216) #22
Japanese Medaka HdrR	MODERN SPECIES	7	CLPTM1L (ENSORLG00000004721)	MRS2 (ENSORLG00000004699)	ENSORLG00000024891	CPQ (ENSORLG00000004684)	dscc1 (ENSORLG00000004660)	mrpl13 (ENSORLG00000004647)	ENSORLG00000004631	deptor (ENSORLG00000004604)	LIMD1 (ENSORLG00000004582)	lars2 (ENSORLG00000004574)	ENSORLG00000023875	TMEM158 (ENSORLG00000004555)	CLEC3B (ENSORLG00000028179)	ENSORLG00000004544	CEP85 (ENSORLG00000004532)	wdtc1 (ENSORLG00000004505) #22	tmem222a (ENSORLG00000004480) #23	tpbgl (ENSORLG00000004455)	nr0b2a (ENSORLG00000004442)	ENSORLG00000025251	gpatch3 (ENSORLG00000004435)	gpn2 (ENSORLG00000004425)	ARID1A (ENSORLG00000004410)	pigv (ENSORLG00000004385)	zdhhc18a (ENSORLG00000004382)	tent5ba (ENSORLG00000028579)	ENSORLG00000003790	tcea3 (ENSORLG00000004368)	mc5rb (ENSORLG00000004348)	mc2r (ENSORLG00000029881)	zdhhc3a (ENSORLG00000004309)
Ovalentaria_B	ANCESTRAL SPECIES	1	ENSGT00940000157222.b	ENSGT00390000018110	ENSGT00390000017400	ENSGT00390000001515	ENSGT00940000153769.F.n	ENSGT00520000055667	ENSGT00940000159019	ENSGT00390000015114	ENSGT00390000009719	ENSGT00390000010209.c.b	ENSGT00950000183186.B.b.c	ENSGT00390000017627.a.a.b	ENSGT00940000178119	ENSGT00520000055567.b	ENSGT00620000087993.a.b	ENSGT00950000182900.B #22	ENSGT00390000007371.f #23	ENSGT00940000154868.a.b.b	ENSGT00390000016565.g	ENSGT00390000015719.c.c	ENSGT00390000004191	ENSGT00950000183172.B	ENSGT00940000155194.v.b	ENSGT00390000013174	ENSGT00940000156585.c.a	ENSGT00940000165028.a	ENSGT00940000157034	ENSGT00940000157669.a.b	ENSGT00940000155543	ENSGT00940000157582.g	ENSGT00950000183053.A.a.b
Pomacentridae	ANCESTRAL SPECIES	18	ENSGT00390000003209	ENSGT00940000157222.b	ENSGT00390000018110	ENSGT00390000017400	ENSGT00390000001515	ENSGT00940000153769.F.n	ENSGT00520000055667	ENSGT00940000159019	ENSGT00390000015114	ENSGT00390000010209.c.b	ENSGT00950000183186.B.b.c	ENSGT00390000017627.a.a.b	ENSGT00940000178119	ENSGT00520000055567.b	ENSGT00620000087993.a.b	ENSGT00950000182900.B #22	ENSGT00390000007371.f #23	ENSGT00940000154868.a.b.b	ENSGT00390000016565.g	ENSGT00390000015719.c.c	ENSGT00390000004191	ENSGT00950000183172.B	ENSGT00940000155194.v.b	ENSGT00390000013174	ENSGT00940000156585.c.a	ENSGT00940000165028.a	ENSGT00940000157034	ENSGT00940000157669.a.b	ENSGT00940000155543	ENSGT00940000157582.g	ENSGT00950000183053.A.a.b
Pomacentridae_A	ANCESTRAL SPECIES	5	ENSGT00940000157046.C	ENSGT00390000003209	ENSGT00940000157222.b	ENSGT00390000018110	ENSGT00390000017400	ENSGT00390000001515	ENSGT00940000153769.F.n	ENSGT00520000055667	ENSGT00940000159019	ENSGT00390000015114	ENSGT00390000010209.c.b	ENSGT00950000183186.B.b.c	ENSGT00390000017627.a.a.b	ENSGT00520000055567.b	ENSGT00620000087993.a.b	ENSGT00950000182900.B #22	ENSGT00390000007371.f #23	ENSGT00940000154868.a.b.b	ENSGT00390000016565.g	ENSGT00390000015719.c.c	ENSGT00390000004191	ENSGT00950000183172.B	ENSGT00940000155194.v.b	ENSGT00390000013174	ENSGT00940000156585.c.a	ENSGT00940000165028.a	ENSGT00940000157034	ENSGT00940000157669.a.b	ENSGT00940000155543	ENSGT00940000157582.g	ENSGT00950000183053.A.a.b
Amphiprion	ANCESTRAL SPECIES	1	ENSGT01100000263520.a.a.b.a.b	ENSGT00390000003209	ENSGT00940000157222.b	ENSGT00390000018110	ENSGT00390000017400	ENSGT00390000001515	ENSGT00940000153769.F.n	ENSGT00520000055667	ENSGT00940000159019	ENSGT00390000015114	ENSGT00390000010209.c.b	ENSGT00950000183186.B.b.c	ENSGT00390000017627.a.a.b	ENSGT00520000055567.b	ENSGT00620000087993.a.b	ENSGT00950000182900.B #22	ENSGT00390000007371.f #23	ENSGT00940000154868.a.b.b	ENSGT00390000016565.g	ENSGT00390000015719.c.c	ENSGT00390000004191	ENSGT00950000183172.B	ENSGT00940000155194.v.b	ENSGT00390000013174	ENSGT00940000156585.c.a	ENSGT00940000165028.a	ENSGT00940000157034	ENSGT00940000157669.a.b	ENSGT00940000155543	ENSGT00940000157582.g	ENSGT00950000183053.A.a.b
Orange clownfish	MODERN SPECIES	21	tmem116 (ENSAPEG00000019727)	rpp25l (ENSAPEG00000019714)	ENSAPEG00000019705	CPQ (ENSAPEG00000019655)	dscc1 (ENSAPEG00000019612)	mrpl13 (ENSAPEG00000019583)	COL14A1 (ENSAPEG00000019501)	deptor (ENSAPEG00000019438)	LIMD1 (ENSAPEG00000019388)	lars2 (ENSAPEG00000019312)	cdcp1a (ENSAPEG00000019254)	CLEC3B (ENSAPEG00000019207)	FEZ2 (ENSAPEG00000019155)	ENSAPEG00000019122	CEP85 (ENSAPEG00000019107)	wdtc1 (ENSAPEG00000019007) #22	tmem222a (ENSAPEG00000018960) #23	tpbgl (ENSAPEG00000018953)	KDF1 (ENSAPEG00000018942)	nr0b2a (ENSAPEG00000018934)	gpatch3 (ENSAPEG00000018926)	gpn2 (ENSAPEG00000018912)	ARID1A (ENSAPEG00000018815)	pigv (ENSAPEG00000018791)	zdhhc18a (ENSAPEG00000018753)	tent5ba (ENSAPEG00000018735)	ENSAPEG00000018717	tcea3 (ENSAPEG00000018704)	oprd1b (ENSAPEG00000018674)	rcc1 (ENSAPEG00000018662)	phactr4b (ENSAPEG00000018616)
Clown anemonefish	MODERN SPECIES	1388								deptor (ENSAOCG00000018807)	LIMD1 (ENSAOCG00000018829)	lars2 (ENSAOCG00000018907)	cdcp1a (ENSAOCG00000018983)	CLEC3B (ENSAOCG00000002318)	FEZ2 (ENSAOCG00000019077)	ENSAOCG00000019169	CEP85 (ENSAOCG00000019205)	wdtc1 (ENSAOCG00000001383) #22	tmem222a (ENSAOCG00000002414) #23	tpbgl (ENSAOCG00000001397)	KDF1 (ENSAOCG00000019334)	nr0b2a (ENSAOCG00000019342)	gpatch3 (ENSAOCG00000019352)	gpn2 (ENSAOCG00000019361)	ARID1A (ENSAOCG00000019453)	pigv (ENSAOCG00000019469)
Spiny chromis	MODERN SPECIES	157												CLEC3B (ENSAPOG00000001282)	ENSAPOG00000001273	ENSAPOG00000001265	CEP85 (ENSAPOG00000001255)	wdtc1 (ENSAPOG00000001239) #22	tmem222a (ENSAPOG00000001224) #23	tpbgl (ENSAPOG00000001220)	KDF1 (ENSAPOG00000001216)	nr0b2a (ENSAPOG00000001213)	gpatch3 (ENSAPOG00000001212)	gpn2 (ENSAPOG00000001208)	ARID1A (ENSAPOG00000001203)	pigv (ENSAPOG00000001196)	zdhhc18a (ENSAPOG00000001193)	tent5ba (ENSAPOG00000001189)	tcea3 (ENSAPOG00000001185)	oprd1b (ENSAPOG00000001182)	rcc1 (ENSAPOG00000001181)	ENSAPOG00000000003	ENSAPOG00000001178
Bicolor damselfish	MODERN SPECIES	1175									lars2 (ENSSPAG00000013283)	cdcp1a (ENSSPAG00000013245)	CLEC3B (ENSSPAG00000013236)	FEZ2 (ENSSPAG00000013219)	ENSSPAG00000013211	ENSSPAG00000013199	CEP85 (ENSSPAG00000013178)	wdtc1 (ENSSPAG00000013128) #22	tmem222a (ENSSPAG00000013111) #23	tpbgl (ENSSPAG00000013101)	KDF1 (ENSSPAG00000013094)	nr0b2a (ENSSPAG00000013063)	gpatch3 (ENSSPAG00000013046)	gpn2 (ENSSPAG00000013034)	ARID1A (ENSSPAG00000013008)	pigv (ENSSPAG00000013002)	zdhhc18a (ENSSPAG00000012962)	tent5ba (ENSSPAG00000012949)	tcea3 (ENSSPAG00000012850)
Cichlidae	ANCESTRAL SPECIES	26	ENSGT00390000009988	ENSGT00940000157222.b	ENSGT00390000018110	ENSGT00390000017400	ENSGT00390000001515	ENSGT00940000153769.F.n	ENSGT00520000055667	ENSGT00940000159019	ENSGT00390000015114	ENSGT00390000009719	ENSGT00390000010209.c.b	ENSGT00950000183186.B.b.c	ENSGT00390000017627.a.a.b	ENSGT00520000055567.b	ENSGT00620000087993.a.b	ENSGT00950000182900.B #22	ENSGT00390000007371.f #23	ENSGT00940000154868.a.b.b	ENSGT00390000016565.g	ENSGT00390000015719.c.c	ENSGT00390000004191	ENSGT00950000183172.B	ENSGT00940000155194.v.b	ENSGT00390000013174	ENSGT00940000156585.c.a	ENSGT00940000165028.a	ENSGT00940000157034	ENSGT00940000157669.a.b	ENSGT00940000155543	ENSGT00940000157582.g	ENSGT00950000183053.A.a.b
Pseudocrenilabrinae	ANCESTRAL SPECIES	2	ENSGT00940000157222.b	ENSGT00390000018110	ENSGT00390000017400	ENSGT00390000001515	ENSGT00940000153769.F.n	ENSGT00520000055667	ENSGT00940000159019	ENSGT00390000015114	ENSGT00390000009719	ENSGT00390000010209.c.b.d	ENSGT00390000010209.c.b.c	ENSGT00950000183186.B.b.c	ENSGT00390000017627.a.a.b	ENSGT00520000055567.b	ENSGT00620000087993.a.b	ENSGT00950000182900.B #22	ENSGT00390000007371.f #23	ENSGT00940000154868.a.b.b	ENSGT00390000016565.g	ENSGT00390000015719.c.c	ENSGT00390000004191	ENSGT00950000183172.B	ENSGT00940000155194.v.b	ENSGT00390000013174	ENSGT00940000156585.c.a	ENSGT00940000165028.a	ENSGT00940000157034	ENSGT00940000157669.a.b	ENSGT00940000155543	ENSGT00940000157582.g	ENSGT00950000183053.A.a.b
Pseudocrenilabrinae_A	ANCESTRAL SPECIES	1	ENSGT00940000157222.b	ENSGT00390000018110	ENSGT00390000017400	ENSGT00390000001515	ENSGT00940000153769.F.n	ENSGT00520000055667	ENSGT00940000159019	ENSGT00390000015114	ENSGT00390000009719	ENSGT00390000010209.c.b.d	ENSGT00390000010209.c.b.c	ENSGT00950000183186.B.b.c	ENSGT00390000017627.a.a.b	ENSGT00520000055567.b	ENSGT00620000087993.a.b	ENSGT00950000182900.B #22	ENSGT00390000007371.f #23	ENSGT00940000154868.a.b.b	ENSGT00390000016565.g	ENSGT00390000015719.c.c	ENSGT00390000004191	ENSGT00950000183172.B	ENSGT00940000155194.v.b	ENSGT00390000013174	ENSGT00940000156585.c.a	ENSGT00940000165028.a	ENSGT00940000157034	ENSGT00940000157669.a.b	ENSGT00940000155543	ENSGT00940000157582.g	ENSGT00950000183053.A.a.b
Haplochromini	ANCESTRAL SPECIES	24	ENSGT00940000157222.b	ENSGT00390000018110	ENSGT00390000017400	ENSGT00390000001515	ENSGT00940000153769.F.n	ENSGT00520000055667	ENSGT00940000159019	ENSGT00390000015114	ENSGT00390000009719	ENSGT00390000010209.c.b.d	ENSGT00390000010209.c.b.c	ENSGT00950000183186.B.b.c	ENSGT00390000017627.a.a.b	ENSGT00520000055567.b	ENSGT00620000087993.a.b	ENSGT00950000182900.B #22	ENSGT00390000007371.f #23	ENSGT00940000154868.a.b.b	ENSGT00390000016565.g	ENSGT00390000015719.c.c	ENSGT00390000004191	ENSGT00950000183172.B	ENSGT00940000155194.v.b	ENSGT00390000013174	ENSGT00940000156585.c.a	ENSGT00940000165028.a	ENSGT00940000157034	ENSGT00940000157669.a.b	ENSGT00940000155543	ENSGT00940000157582.g	ENSGT00950000183053.A.a.b
Haplochromini_A	ANCESTRAL SPECIES	30	ENSGT00940000157222.b	ENSGT00390000018110	ENSGT00390000017400	ENSGT00390000001515	ENSGT00940000153769.F.n	ENSGT00520000055667	ENSGT00940000159019	ENSGT00390000015114	ENSGT00390000009719	ENSGT00390000010209.c.b.d	ENSGT00390000010209.c.b.c	ENSGT00950000183186.B.b.c	ENSGT00390000017627.a.a.b	ENSGT00520000055567.b	ENSGT00620000087993.a.b	ENSGT00950000182900.B #22	ENSGT00390000007371.f #23	ENSGT00940000154868.a.b.b	ENSGT00390000016565.g	ENSGT00390000015719.c.c	ENSGT00390000004191	ENSGT00950000183172.B	ENSGT00940000155194.v.b	ENSGT00390000013174	ENSGT00940000156585.c.a	ENSGT00940000165028.a	ENSGT00940000157034	ENSGT00940000157669.a.b	ENSGT00940000155543	ENSGT00940000157582.g	ENSGT00950000183053.A.a.b
Haplochromini_B	ANCESTRAL SPECIES	50	ENSGT00390000018110	ENSGT00390000017400	ENSGT00390000001515	ENSGT00940000153769.F.n	ENSGT00520000055667	ENSGT00940000159019	ENSGT00390000015114	ENSGT00390000009719	ENSGT00390000010209.c.b.d.b	ENSGT00390000010209.c.b.d.a	ENSGT00390000010209.c.b.c	ENSGT00950000183186.B.b.c	ENSGT00390000017627.a.a.b	ENSGT00520000055567.b	ENSGT00620000087993.a.b	ENSGT00950000182900.B #22	ENSGT00390000007371.f #23	ENSGT00940000154868.a.b.b	ENSGT00390000016565.g.c	ENSGT00390000015719.c.c	ENSGT00390000004191	ENSGT00950000183172.B	ENSGT00940000155194.v.b	ENSGT00390000013174	ENSGT00940000156585.c.a	ENSGT00940000165028.a	ENSGT00940000157034	ENSGT00940000157669.a.b	ENSGT00940000155543	ENSGT00940000157582.g	ENSGT00950000183053.A.a.b
Zebra mbuna	MODERN SPECIES	34										ENSMZEG00005019834	cdcp1a (ENSMZEG00005019830)	CLEC3B (ENSMZEG00005019827)	ENSMZEG00005019814	ENSMZEG00005019797	CEP85 (ENSMZEG00005019788)	wdtc1 (ENSMZEG00005019772) #22	tmem222a (ENSMZEG00005019760) #23	tpbgl (ENSMZEG00005019744)	ENSMZEG00005019737	nr0b2a (ENSMZEG00005019734)	gpatch3 (ENSMZEG00005019731)	gpn2 (ENSMZEG00005019726)	ARID1A (ENSMZEG00005019720)	pigv (ENSMZEG00005019715)	zdhhc18a (ENSMZEG00005019713)	tent5ba (ENSMZEG00005019712)	tcea3 (ENSMZEG00005019706)	oprd1b (ENSMZEG00005015794)	rcc1 (ENSMZEG00005015755)	phactr4b (ENSMZEG00005015719)	ENSMZEG00005015671
Eastern happy	MODERN SPECIES	2	ENSACLG00000013261	CPQ (ENSACLG00000013235)	dscc1 (ENSACLG00000013216)	mrpl13 (ENSACLG00000013200)	COL14A1 (ENSACLG00000013132)	deptor (ENSACLG00000013080)	LIMD1 (ENSACLG00000013073)	lars2 (ENSACLG00000013037)	TMEM158 (ENSACLG00000013026)	ENSACLG00000013023	cdcp1a (ENSACLG00000013008)	CLEC3B (ENSACLG00000013006)	ENSACLG00000012980	ENSACLG00000012962	CEP85 (ENSACLG00000012930)	wdtc1 (ENSACLG00000012911) #22	tmem222a (ENSACLG00000012836) #23	tpbgl (ENSACLG00000012831)	ENSACLG00000012826	nr0b2a (ENSACLG00000012820)	gpatch3 (ENSACLG00000012807)	gpn2 (ENSACLG00000012793)	ARID1A (ENSACLG00000012755)	pigv (ENSACLG00000012733)	zdhhc18a (ENSACLG00000012707)	tent5ba (ENSACLG00000012695)	tcea3 (ENSACLG00000012597)	oprd1b (ENSACLG00000012582)	rcc1 (ENSACLG00000012547)	phactr4b (ENSACLG00000012517)	ENSACLG00000012469
P. nyererei	MODERN SPECIES	439	MRS2 (ENSPNYG00000004586)	ENSPNYG00000004600	CPQ (ENSPNYG00000004611)	dscc1 (ENSPNYG00000004640)	mrpl13 (ENSPNYG00000004669)	COL14A1 (ENSPNYG00000004711)	deptor (ENSPNYG00000004816)	LIMD1 (ENSPNYG00000004825)	lars2 (ENSPNYG00000004846)	TMEM158 (ENSPNYG00000004927)	cdcp1a (ENSPNYG00000004940)	CLEC3B (ENSPNYG00000004958)	ENSPNYG00000004967	ENSPNYG00000005002	CEP85 (ENSPNYG00000005034)	wdtc1 (ENSPNYG00000005049) #22	tmem222a (ENSPNYG00000005103) #23	tpbgl (ENSPNYG00000005135)	nr0b2a (ENSPNYG00000005164)	gpatch3 (ENSPNYG00000005172)	gpn2 (ENSPNYG00000005186)	ARID1A (ENSPNYG00000005199)	pigv (ENSPNYG00000005224)	zdhhc18a (ENSPNYG00000005233)	tent5ba (ENSPNYG00000005263)	ENSPNYG00000005272	tcea3 (ENSPNYG00000005286)	oprd1b (ENSPNYG00000005325)	rcc1 (ENSPNYG00000005348)	phactr4b (ENSPNYG00000005377)	ENSPNYG00000005420
Burton s mouthbrooder	MODERN SPECIES	713										ENSHBUG00000020187	CLEC3B (ENSHBUG00000020189)	cdcp1a (ENSHBUG00000020244)	ENSHBUG00000020309	ENSHBUG00000020387	CEP85 (ENSHBUG00000020409)	wdtc1 (ENSHBUG00000020447) #22	tmem222a (ENSHBUG00000020475) #23	tpbgl (ENSHBUG00000020479)	nr0b2a (ENSHBUG00000020485)	gpatch3 (ENSHBUG00000020513)	gpn2 (ENSHBUG00000020524)	ARID1A (ENSHBUG00000020639)	pigv (ENSHBUG00000020655)	zdhhc18a (ENSHBUG00000020668)	tent5ba (ENSHBUG00000020683)	tcea3 (ENSHBUG00000020748)	oprd1b (ENSHBUG00000020777)	rcc1 (ENSHBUG00000020825)	phactr4b (ENSHBUG00000020877)	ENSHBUG00000020903	HIVEP3 (ENSHBUG00000020969)
Lyretail cichlid	MODERN SPECIES	331	ENSNBRG00000021124	MRS2 (ENSNBRG00000021882)	ENSNBRG00000021901	CPQ (ENSNBRG00000021915)	dscc1 (ENSNBRG00000021943)	mrpl13 (ENSNBRG00000021965)	COL14A1 (ENSNBRG00000022015)	deptor (ENSNBRG00000022094)	LIMD1 (ENSNBRG00000022129)	lars2 (ENSNBRG00000022165)	TMEM158 (ENSNBRG00000022207)	cdcp1a (ENSNBRG00000022216)	ENSNBRG00000022232	ENSNBRG00000022249	CEP85 (ENSNBRG00000022276)	wdtc1 (ENSNBRG00000022328) #22	tmem222a (ENSNBRG00000022351) #23	tpbgl (ENSNBRG00000022364)	ENSNBRG00000022395	nr0b2a (ENSNBRG00000022432)	gpatch3 (ENSNBRG00000000365)	gpn2 (ENSNBRG00000000384)	ARID1A (ENSNBRG00000000408)	pigv (ENSNBRG00000000491)	zdhhc18a (ENSNBRG00000000503)	tent5ba (ENSNBRG00000000536)	tcea3 (ENSNBRG00000000553)	ENSNBRG00000000663	oprd1b (ENSNBRG00000000698)	rcc1 (ENSNBRG00000001101)	phactr4b (ENSNBRG00000001134)
Nile tilapia	MODERN SPECIES	2	CPQ (ENSONIG00000006829)	dscc1 (ENSONIG00000006827)	mrpl13 (ENSONIG00000037652)	COL14A1 (ENSONIG00000006815)	deptor (ENSONIG00000006812)	LIMD1 (ENSONIG00000035860)	lars2 (ENSONIG00000006802)	TMEM158 (ENSONIG00000041619)	ENSONIG00000030470	ENSONIG00000042157	cdcp1a (ENSONIG00000006800)	CLEC3B (ENSONIG00000028365)	ENSONIG00000006796	ENSONIG00000006793	CEP85 (ENSONIG00000006789)	wdtc1 (ENSONIG00000006780) #22	tmem222a (ENSONIG00000006776) #23	tpbgl (ENSONIG00000006775)	ENSONIG00000006773	nr0b2 (ENSONIG00000031748)	gpatch3 (ENSONIG00000006771)	gpn2 (ENSONIG00000006769)	ARID1A (ENSONIG00000006764)	pigv (ENSONIG00000006763)	zdhhc18a (ENSONIG00000006761)	tent5b (ENSONIG00000043099)	tcea3 (ENSONIG00000006755)	oprd1 (ENSONIG00000038781)	ENSONIG00000037358	rcc1 (ENSONIG00000006750)	phactr4b (ENSONIG00000006749)
Midas cichlid	MODERN SPECIES	1213	MRS2 (ENSACIG00000011167)	ENSACIG00000011156	CPQ (ENSACIG00000011136)	dscc1 (ENSACIG00000011121)	mrpl13 (ENSACIG00000011101)	COL14A1 (ENSACIG00000011027)	deptor (ENSACIG00000011002)	LIMD1 (ENSACIG00000010949)	lars2 (ENSACIG00000010901)	TMEM158 (ENSACIG00000010880)	cdcp1a (ENSACIG00000010859)	CLEC3B (ENSACIG00000010837)	ENSACIG00000010812	ENSACIG00000010779	CEP85 (ENSACIG00000010703)	wdtc1 (ENSACIG00000010658) #22	tmem222a (ENSACIG00000010606) #23	tpbgl (ENSACIG00000010582)	ENSACIG00000010575	nr0b2a (ENSACIG00000010554)	gpn2 (ENSACIG00000010469)	ARID1A (ENSACIG00000010374)	pigv (ENSACIG00000010361)	zdhhc18a (ENSACIG00000010303)	tent5ba (ENSACIG00000010290)	tcea3 (ENSACIG00000010254)	oprd1b (ENSACIG00000010026)
Percomorphaceae_C	ANCESTRAL SPECIES	2	ENSGT00940000157222.b	ENSGT00390000018110	ENSGT00390000017400	ENSGT00390000001515	ENSGT00940000153769.F.n	ENSGT00520000055667	ENSGT00940000159019	ENSGT00390000015114	ENSGT00390000009719	ENSGT00390000010209.c.b	ENSGT00950000183186.B.b.c	ENSGT00390000017627.a.a.b	ENSGT00940000178119	ENSGT00520000055567.b	ENSGT00620000087993.a.b	ENSGT00950000182900.B #22	ENSGT00390000007371.f #23	ENSGT00940000154868.a.b.b	ENSGT00390000016565.g	ENSGT00390000015719.c.c	ENSGT00390000004191	ENSGT00950000183172.B	ENSGT00940000155194.v.b	ENSGT00390000013174	ENSGT00940000156585.c.a	ENSGT00940000165028.a	ENSGT00940000157034	ENSGT00940000157669.a.b	ENSGT00940000155543	ENSGT00940000157582.g	ENSGT00950000183053.A.a.b
Eupercaria	ANCESTRAL SPECIES	1	ENSGT00940000157222.b	ENSGT00390000018110	ENSGT00390000017400	ENSGT00390000001515	ENSGT00940000153769.F.n	ENSGT00520000055667	ENSGT00940000159019	ENSGT00390000015114	ENSGT00390000009719	ENSGT00390000010209.c.b	ENSGT00950000183186.B.b.c	ENSGT00390000017627.a.a.b	ENSGT00940000178119	ENSGT00520000055567.b	ENSGT00620000087993.a.b	ENSGT00950000182900.B #22	ENSGT00390000007371.f #23	ENSGT00940000154868.a.b.b	ENSGT00390000016565.g	ENSGT00390000015719.c.c	ENSGT00390000004191	ENSGT00950000183172.B	ENSGT00940000155194.v.b	ENSGT00390000013174	ENSGT00940000156585.c.a	ENSGT00940000165028.a	ENSGT00940000157034	ENSGT00940000157669.a.b	ENSGT00940000155543	ENSGT00940000157582.g	ENSGT00950000183053.A.a.b
Eupecaria_A	ANCESTRAL SPECIES	2	ENSGT00940000157222.b	ENSGT00390000018110	ENSGT00390000017400	ENSGT00390000001515	ENSGT00940000153769.F.n	ENSGT00520000055667	ENSGT00940000159019	ENSGT00390000015114	ENSGT00390000009719	ENSGT00390000010209.c.b	ENSGT00950000183186.B.b.c	ENSGT00390000017627.a.a.b	ENSGT00940000178119	ENSGT00520000055567.b	ENSGT00620000087993.a.b	ENSGT00950000182900.B #22	ENSGT00390000007371.f #23	ENSGT00940000154868.a.b.b	ENSGT00390000016565.g	ENSGT00390000015719.c.c	ENSGT00390000004191	ENSGT00950000183172.B	ENSGT00940000155194.v.b	ENSGT00390000013174	ENSGT00940000156585.c.a	ENSGT00940000165028.a	ENSGT00940000157034	ENSGT00940000157669.a.b	ENSGT00940000155543	ENSGT00940000157582.g	ENSGT00950000183053.A.a.b
Ballan wrasse	MODERN SPECIES	320					COL14A1 (ENSLBEG00000006199)	mrpl13 (ENSLBEG00000006340)	dscc1 (ENSLBEG00000006380)	deptor (ENSLBEG00000006472)	LIMD1 (ENSLBEG00000006501)	lars2 (ENSLBEG00000006552)	cdcp1a (ENSLBEG00000006669)	CLEC3B (ENSLBEG00000006726)	ENSLBEG00000006748	ENSLBEG00000006805	CEP85 (ENSLBEG00000006860)	wdtc1 (ENSLBEG00000006897) #22	tmem222a (ENSLBEG00000006974) #23	tpbgl (ENSLBEG00000007001)	ENSLBEG00000007012	nr0b2a (ENSLBEG00000007031)	gpatch3 (ENSLBEG00000007046)	gpn2 (ENSLBEG00000007059)	ARID1A (ENSLBEG00000007086)	pigv (ENSLBEG00000007204)	zdhhc18a (ENSLBEG00000007231)	tent5ba (ENSLBEG00000007247)	tcea3 (ENSLBEG00000007289)	oprd1b (ENSLBEG00000007370)	rcc1 (ENSLBEG00000007389)	phactr4b (ENSLBEG00000007429)	ENSLBEG00000007514
Eupecaria_B	ANCESTRAL SPECIES	4	ENSGT00940000157222.b	ENSGT00390000018110	ENSGT00390000017400	ENSGT00390000001515	ENSGT00940000153769.F.n	ENSGT00520000055667	ENSGT00940000159019	ENSGT00390000015114	ENSGT00390000009719	ENSGT00390000010209.c.b	ENSGT00950000183186.B.b.c	ENSGT00390000017627.a.a.b	ENSGT00940000178119	ENSGT00520000055567.b	ENSGT00620000087993.a.b	ENSGT00950000182900.B #22	ENSGT00390000007371.f #23	ENSGT00940000154868.a.b.b	ENSGT00390000016565.g	ENSGT00390000015719.c.c	ENSGT00390000004191	ENSGT00950000183172.B	ENSGT00940000155194.v.b	ENSGT00390000013174	ENSGT00940000156585.c.a	ENSGT00940000165028.a	ENSGT00940000157034	ENSGT00940000157669.a.b	ENSGT00940000155543	ENSGT00940000157582.g	ENSGT00950000183053.A.a.b
Eupecaria_C	ANCESTRAL SPECIES	2	ENSGT00390000009988	ENSGT00940000157222.b	ENSGT00390000018110	ENSGT00390000017400	ENSGT00390000001515	ENSGT00940000153769.F.n	ENSGT00520000055667	ENSGT00940000159019	ENSGT00390000015114	ENSGT00390000009719	ENSGT00390000010209.c.b	ENSGT00950000183186.B.b.c	ENSGT00390000017627.a.a.b	ENSGT00520000055567.b	ENSGT00620000087993.a.b	ENSGT00950000182900.B #22	ENSGT00390000007371.f #23	ENSGT00940000154868.a.b.b	ENSGT00390000016565.g	ENSGT00390000015719.c.c	ENSGT00390000004191	ENSGT00950000183172.B	ENSGT00940000155194.v.b	ENSGT00390000013174	ENSGT00940000156585.c.a	ENSGT00940000165028.a	ENSGT00940000157034	ENSGT00940000157669.a.b	ENSGT00940000155543	ENSGT00940000157582.g	ENSGT00950000183053.A.a.b
Eupercaria_incertae_sedis	ANCESTRAL SPECIES	2	ENSGT00390000009988	ENSGT00940000157222.b	ENSGT00390000018110	ENSGT00390000017400	ENSGT00390000001515	ENSGT00940000153769.F.n	ENSGT00520000055667	ENSGT00940000159019	ENSGT00390000015114	ENSGT00390000009719	ENSGT00390000010209.c.b	ENSGT00950000183186.B.b.c	ENSGT00390000017627.a.a.b	ENSGT00520000055567.b	ENSGT00620000087993.a.b	ENSGT00950000182900.B #22	ENSGT00390000007371.f #23	ENSGT00940000154868.a.b.b	ENSGT00390000016565.g	ENSGT00390000015719.c.c	ENSGT00390000004191	ENSGT00950000183172.B	ENSGT00940000155194.v.b	ENSGT00390000013174	ENSGT00940000156585.c.a	ENSGT00940000165028.a	ENSGT00940000157034	ENSGT00940000157669.a.b	ENSGT00940000155543	ENSGT00940000157582.g	ENSGT00950000183053.A.a.b
European seabass	MODERN SPECIES	6	ENSDLAG00005033849	ENSDLAG00005008944	ENSDLAG00005008929	mrpl13 (ENSDLAG00005008859)	ENSDLAG00005005702	ENSDLAG00005015521	ENSDLAG00005002727	deptor (ENSDLAG00005005578)	LIMD1 (ENSDLAG00005005511)	lars2 (ENSDLAG00005004900)	TMEM158 (ENSDLAG00005004876)	cdcp1a (ENSDLAG00005004860)	ENSDLAG00005034322	ENSDLAG00005004677	ENSDLAG00005004594	wdtc1 (ENSDLAG00005004338) #22	tmem222a (ENSDLAG00005032304) #23	tpbgl (ENSDLAG00005018444)	nr0b2a (ENSDLAG00005018436)	ENSDLAG00005018442	gpn2 (ENSDLAG00005018430)	ARID1A (ENSDLAG00005018183)	pigv (ENSDLAG00005018164)	zdhhc18a (ENSDLAG00005032044)	tent5ba (ENSDLAG00005018132)	tcea3 (ENSDLAG00005017991)	oprd1b (ENSDLAG00005017954)	rcc1 (ENSDLAG00005017919)	phactr4b (ENSDLAG00005017879)	ENSDLAG00005017871	ENSDLAG00005017860
Large yellow croaker	MODERN SPECIES	484	CLPTM1L (ENSLCRG00005006921)	MRS2 (ENSLCRG00005006915)	ENSLCRG00005006902	CPQ (ENSLCRG00005006832)	dscc1 (ENSLCRG00005006815)	mrpl13 (ENSLCRG00005006813)	COL14A1 (ENSLCRG00005006535)	deptor (ENSLCRG00005006448)	LIMD1 (ENSLCRG00005006444)	lars2 (ENSLCRG00005003551)	TMEM158 (ENSLCRG00005003309)	cdcp1a (ENSLCRG00005003299)	CLEC3B (ENSLCRG00005003283)	ENSLCRG00005003235	ENSLCRG00005003205	wdtc1 (ENSLCRG00005003097) #22	CEP85 (ENSLCRG00005003005)	tmem222a (ENSLCRG00005002967) #23	tpbgl (ENSLCRG00005002945)	ENSLCRG00005002912	nr0b2a (ENSLCRG00005017297)	gpatch3 (ENSLCRG00005017294)	gpn2 (ENSLCRG00005017290)	ARID1A (ENSLCRG00005017266)	pigv (ENSLCRG00005017264)	zdhhc18a (ENSLCRG00005017262)	tent5ba (ENSLCRG00005017260)	tcea3 (ENSLCRG00005017257)	oprd1b (ENSLCRG00005017254)	rcc1 (ENSLCRG00005017239)	phactr4b (ENSLCRG00005017223)
Gilthead seabream	MODERN SPECIES	8	CPQ (ENSSAUG00010012241)	ENSSAUG00010012385	dscc1 (ENSSAUG00010012389)	mrpl13 (ENSSAUG00010012398)	COL14A1 (ENSSAUG00010012438)	deptor (ENSSAUG00010013418)	ENSSAUG00010013421	LIMD1 (ENSSAUG00010013425)	lars2 (ENSSAUG00010013465)	TMEM158 (ENSSAUG00010014322)	cdcp1a (ENSSAUG00010014327)	CLEC3B (ENSSAUG00010014331)	ENSSAUG00010014333	ENSSAUG00010014337	CEP85 (ENSSAUG00010014340)	wdtc1 (ENSSAUG00010014359) #22	tmem222a (ENSSAUG00010014436) #23	tpbgl (ENSSAUG00010014440)	KDF1 (ENSSAUG00010014441)	nr0b2a (ENSSAUG00010014444)	gpatch3 (ENSSAUG00010014445)	gpn2 (ENSSAUG00010014447)	ARID1A (ENSSAUG00010014457)	pigv (ENSSAUG00010014498)	zdhhc18a (ENSSAUG00010014502)	tent5ba (ENSSAUG00010014506)	tcea3 (ENSSAUG00010014507)	oprd1b (ENSSAUG00010014509)	rcc1 (ENSSAUG00010014511)	phactr4b (ENSSAUG00010014604)	ENSSAUG00010014620
Perciformes	ANCESTRAL SPECIES	3	ENSGT00940000157222.b	ENSGT00390000018110	ENSGT00390000017400	ENSGT00390000001515	ENSGT00940000153769.F.n	ENSGT00520000055667	ENSGT00940000159019	ENSGT00390000015114	ENSGT00390000009719	ENSGT00390000010209.c.b	ENSGT00950000183186.B.b.c	ENSGT00390000017627.a.a.b	ENSGT00940000178119	ENSGT00520000055567.b	ENSGT00620000087993.a.b	ENSGT00950000182900.B #22	ENSGT00390000007371.f #23	ENSGT00940000154868.a.b.b	ENSGT00390000016565.g	ENSGT00390000015719.c.c	ENSGT00390000004191	ENSGT00950000183172.B	ENSGT00940000155194.v.b	ENSGT00390000013174	ENSGT00940000156585.c.a	ENSGT00940000165028.a	ENSGT00940000157034	ENSGT00940000157669.a.b	ENSGT00940000155543	ENSGT00940000157582.g	ENSGT00950000183053.A.a.b
Perciformes_a	ANCESTRAL SPECIES	3	ENSGT00390000009988	ENSGT00940000157222.b	ENSGT00390000018110	ENSGT00390000017400	ENSGT00390000001515	ENSGT00940000153769.F.n	ENSGT00520000055667	ENSGT00940000159019	ENSGT00390000015114	ENSGT00390000009719	ENSGT00950000183186.B.b.c	ENSGT00390000017627.a.a.b	ENSGT00940000178119	ENSGT00520000055567.b	ENSGT00620000087993.a.b	ENSGT00950000182900.B #22	ENSGT00390000007371.f #23	ENSGT00940000154868.a.b.b	ENSGT00390000016565.g	ENSGT00390000015719.c.c	ENSGT00390000004191	ENSGT00950000183172.B	ENSGT00940000155194.v.b	ENSGT00390000013174	ENSGT00940000156585.c.a	ENSGT00940000165028.a	ENSGT00940000157034	ENSGT00940000157669.a.b	ENSGT00940000155543	ENSGT00940000157582.g	ENSGT00950000183053.A.a.b
Channel bull blenny	MODERN SPECIES	7	ENSCGOG00000011777	CLPTM1L (ENSCGOG00000011685)	MRS2 (ENSCGOG00000011642)	ENSCGOG00000011638	CPQ (ENSCGOG00000011503)	dscc1 (ENSCGOG00000011475)	mrpl13 (ENSCGOG00000011451)	COL14A1 (ENSCGOG00000010147)	deptor (ENSCGOG00000010119)	LIMD1 (ENSCGOG00000010070)	lars2 (ENSCGOG00000009538)	CLEC3B (ENSCGOG00000009511)	FEZ2 (ENSCGOG00000009488)	ENSCGOG00000009483	CEP85 (ENSCGOG00000009466)	wdtc1 (ENSCGOG00000009093) #22	tmem222a (ENSCGOG00000009078) #23	tpbgl (ENSCGOG00000009060)	ENSCGOG00000009056	nr0b2a (ENSCGOG00000009050)	gpatch3 (ENSCGOG00000009043)	gpn2 (ENSCGOG00000009026)	ARID1A (ENSCGOG00000008977)	pigv (ENSCGOG00000008975)	zdhhc18a (ENSCGOG00000008961)	tent5ba (ENSCGOG00000008957)	tcea3 (ENSCGOG00000008933)	oprd1b (ENSCGOG00000008927)	rcc1 (ENSCGOG00000008639)	phactr4b (ENSCGOG00000008613)	ENSCGOG00000008607
Pike perch	MODERN SPECIES	15	MRS2 (ENSSLUG00000005198)	ENSSLUG00000005217	CPQ (ENSSLUG00000005294)	dscc1 (ENSSLUG00000005806)	mrpl13 (ENSSLUG00000005825)	COL14A1 (ENSSLUG00000005831)	deptor (ENSSLUG00000005894)	LIMD1 (ENSSLUG00000005930)	lars2 (ENSSLUG00000006077)	TMEM158 (ENSSLUG00000009029)	CLEC3B (ENSSLUG00000009032)	FEZ2 (ENSSLUG00000009039)	ENSSLUG00000009046	ENSSLUG00000009051	ENSSLUG00000009063	wdtc1 (ENSSLUG00000009092) #22	tmem222a (ENSSLUG00000009128) #23	tpbgl (ENSSLUG00000009132)	KDF1 (ENSSLUG00000009138)	nr0b2a (ENSSLUG00000009161)	gpatch3 (ENSSLUG00000009185)	gpn2 (ENSSLUG00000009194)	ARID1A (ENSSLUG00000009196)	pigv (ENSSLUG00000009205)	zdhhc18a (ENSSLUG00000009209)	tent5ba (ENSSLUG00000009216)	tcea3 (ENSSLUG00000009231)	oprd1b (ENSSLUG00000009258)	rcc1 (ENSSLUG00000009264)	phactr4b (ENSSLUG00000009281)	ENSSLUG00000009296
Cottioidei	ANCESTRAL SPECIES	7	ENSGT00390000009988	ENSGT00940000157222.b	ENSGT00390000018110	ENSGT00390000017400	ENSGT00390000001515	ENSGT00940000153769.F.n	ENSGT00520000055667	ENSGT00940000159019	ENSGT00390000015114	ENSGT00390000009719	ENSGT00390000010209.c.b	ENSGT00950000183186.B.b.c	ENSGT00390000017627.a.a.b	ENSGT00520000055567.b	ENSGT00620000087993.a.b	ENSGT00950000182900.B #22	ENSGT00390000007371.f #23	ENSGT00940000154868.a.b.b	ENSGT00390000016565.g	ENSGT00390000015719.c.c	ENSGT00390000004191	ENSGT00950000183172.B	ENSGT00940000155194.v.b	ENSGT00390000013174	ENSGT00940000156585.c.a	ENSGT00940000165028.a	ENSGT00940000157034	ENSGT00940000157669.a.b	ENSGT00940000155543	ENSGT00940000157582.g	ENSGT00950000183053.A.a.b
Lumpfish	MODERN SPECIES	7	MRS2 (ENSCLMG00005007298)	ENSCLMG00005007546	CPQ (ENSCLMG00005007559)	dscc1 (ENSCLMG00005008357)	mrpl13 (ENSCLMG00005008358)	COL14A1 (ENSCLMG00005008363)	deptor (ENSCLMG00005008372)	LIMD1 (ENSCLMG00005008373)	lars2 (ENSCLMG00005008393)	TMEM158 (ENSCLMG00005009517)	cdcp1a (ENSCLMG00005009519)	CLEC3B (ENSCLMG00005009520)	FEZ2 (ENSCLMG00005009521)	ENSCLMG00005009524	CEP85 (ENSCLMG00005009527)	wdtc1 (ENSCLMG00005009534) #22	tmem222a (ENSCLMG00005009686) #23	tpbgl (ENSCLMG00005009747)	ENSCLMG00005009748	nr0b2a (ENSCLMG00005009749)	gpatch3 (ENSCLMG00005009750)	gpn2 (ENSCLMG00005009752)	ARID1A (ENSCLMG00005009756)	pigv (ENSCLMG00005009830)	zdhhc18a (ENSCLMG00005009831)	tent5ba (ENSCLMG00005009832)	tcea3 (ENSCLMG00005009833)	oprd1b (ENSCLMG00005009835)	rcc1 (ENSCLMG00005009843)	ENSCLMG00005009988	ENSCLMG00005009989
Stickleback	MODERN SPECIES	19	ENSGACG00000007040	ENSGACG00000007045	CPQ (ENSGACG00000007051)	dscc1 (ENSGACG00000007056)	mrpl13 (ENSGACG00000007061)	COL14A1 (ENSGACG00000007065)	ENSGACG00000007079	deptor (ENSGACG00000007081)	LIMD1 (ENSGACG00000007087)	lars2 (ENSGACG00000007099)	cdcp1a (ENSGACG00000007130)	CLEC3B (ENSGACG00000007136)	ENSGACG00000007141	ENSGACG00000007151	CEP85 (ENSGACG00000007163)	wdtc1 (ENSGACG00000007170) #22	tmem222a (ENSGACG00000007178) #23	tpbgl (ENSGACG00000007188)	ENSGACG00000007194	ENSGACG00000007195	nr0b2a (ENSGACG00000007198)	gpatch3 (ENSGACG00000007199)	gpn2 (ENSGACG00000007225)	ARID1A (ENSGACG00000007244)	pigv (ENSGACG00000007253)	zdhhc18a (ENSGACG00000007261)	tent5ba (ENSGACG00000007269)	tcea3 (ENSGACG00000007286)	oprd1b (ENSGACG00000007300)	rcc1 (ENSGACG00000007316)	phactr4b (ENSGACG00000007346)
Tetraodontidae	ANCESTRAL SPECIES	14	ENSGT00940000157222.b	ENSGT00390000018110	ENSGT00940000163454.a.b	ENSGT00390000017400	ENSGT00390000001515	ENSGT00940000153769.F.n	ENSGT00520000055667	ENSGT00940000159019	ENSGT00390000015114	ENSGT00390000009719	ENSGT00390000010209.c.b	ENSGT00950000183186.B.b.c	ENSGT00390000017627.a.a.b	ENSGT00520000055567.b	ENSGT00620000087993.a.b	ENSGT00950000182900.B #22	ENSGT00390000007371.f #23	ENSGT00940000154868.a.b.b	ENSGT00390000016565.g	ENSGT00390000015719.c.c	ENSGT00390000004191.e	ENSGT00950000183172.B	ENSGT00940000155194.v.b	ENSGT00390000013174	ENSGT00940000156585.c.a	ENSGT00940000165028.a	ENSGT00940000157034	ENSGT00940000157669.a.b	ENSGT00940000155543	ENSGT00940000157582.g	ENSGT00940000175511
Fugu	MODERN SPECIES	19	ENSTRUG00000011927	ENSTRUG00000012025	ENSTRUG00000030825	ENSTRUG00000020053	COL14A1 (ENSTRUG00000012345)	deptor (ENSTRUG00000012469)	LIMD1 (ENSTRUG00000025656)	lars2 (ENSTRUG00000012513)	TMEM158 (ENSTRUG00000023519)	dnali1 (ENSTRUG00000012726)	cdcp1a (ENSTRUG00000012734)	CLEC3B (ENSTRUG00000012771)	ENSTRUG00000012819	ENSTRUG00000012968	CEP85 (ENSTRUG00000013057)	wdtc1 (ENSTRUG00000013148) #22	tmem222a (ENSTRUG00000013224) #23	ENSTRUG00000013261	KDF1 (ENSTRUG00000013266)	nr0b2a (ENSTRUG00000013270)	gpatch3 (ENSTRUG00000013294)	gpn2 (ENSTRUG00000013346)	ARID1A (ENSTRUG00000013351)	pigv (ENSTRUG00000013505)	zdhhc18a (ENSTRUG00000013521)	tent5ba (ENSTRUG00000019516)	tcea3 (ENSTRUG00000013596)	oprd1b (ENSTRUG00000013741)	rcc1 (ENSTRUG00000013885)	phactr4b (ENSTRUG00000013938)	ENSTRUG00000021269
Tetraodon	MODERN SPECIES	23	MRS2 (ENSTNIG00000009638)	ENSTNIG00000009639	CPQ (ENSTNIG00000009640)	ENSTNIG00000009641	dscc1 (ENSTNIG00000009642)	mrpl13 (ENSTNIG00000009643)	COL14A1 (ENSTNIG00000009644)	deptor (ENSTNIG00000009645)	LIMD1 (ENSTNIG00000009646)	lars2 (ENSTNIG00000009647)	cdcp1a (ENSTNIG00000001625)	CLEC3B (ENSTNIG00000009648)	ENSTNIG00000009649	CEP85 (ENSTNIG00000009650)	ENSTNIG00000001431	wdtc1 (ENSTNIG00000009651) #22	tmem222a (ENSTNIG00000009652) #23	tpbgl (ENSTNIG00000009653)	KDF1 (ENSTNIG00000009654)	nr0b2a (ENSTNIG00000009655)	ENSTNIG00000009656	gpatch3 (ENSTNIG00000009657)	gpn2 (ENSTNIG00000009658)	ARID1A (ENSTNIG00000009659)	pigv (ENSTNIG00000009660)	zdhhc18a (ENSTNIG00000000731)	tent5ba (ENSTNIG00000009661)	tcea3 (ENSTNIG00000009662)	oprd1b (ENSTNIG00000009663)	rcc1 (ENSTNIG00000009664)	phactr4b (ENSTNIG00000009665)
Percomorphaceae_D	ANCESTRAL SPECIES	2	ENSGT00390000009988	ENSGT00940000157222.b	ENSGT00390000018110	ENSGT00390000017400	ENSGT00390000001515	ENSGT00940000153769.F.n	ENSGT00520000055667	ENSGT00940000159019	ENSGT00390000015114	ENSGT00390000009719	ENSGT00390000010209.c.b	ENSGT00950000183186.B.b.c	ENSGT00390000017627.a.a.b	ENSGT00520000055567.b	ENSGT00620000087993.a.b	ENSGT00950000182900.B #22	ENSGT00390000007371.f #23	ENSGT00940000154868.a.b.b	ENSGT00390000016565.g	ENSGT00390000015719.c.c	ENSGT00390000004191	ENSGT00950000183172.B	ENSGT00940000155194.v.b	ENSGT00390000013174	ENSGT00940000156585.c.a	ENSGT00940000165028.a	ENSGT00940000157034	ENSGT00940000157669.a.b	ENSGT00940000155543	ENSGT00940000157582.g	ENSGT00950000183053.A.a.b
Anabantaria	ANCESTRAL SPECIES	2	ENSGT00390000009988	ENSGT00940000157222.b	ENSGT00390000018110	ENSGT00390000017400	ENSGT00390000001515	ENSGT00940000153769.F.n	ENSGT00520000055667	ENSGT00940000159019	ENSGT00390000015114	ENSGT00390000009719	ENSGT00390000010209.c.b	ENSGT00950000183186.B.b.c	ENSGT00390000017627.a.a.b	ENSGT00520000055567.b	ENSGT00620000087993.a.b	ENSGT00950000182900.B #22	ENSGT00390000007371.f #23	ENSGT00940000154868.a.b.b	ENSGT00390000016565.g	ENSGT00390000015719.c.c	ENSGT00390000004191	ENSGT00950000183172.B	ENSGT00940000155194.v.b	ENSGT00390000013174	ENSGT00940000156585.c.a	ENSGT00940000165028.a	ENSGT00940000157034	ENSGT00940000157669.a.b	ENSGT00940000155543	ENSGT00940000157582.g	ENSGT00950000183053.A.a.b
Anabantoidei	ANCESTRAL SPECIES	3	ENSGT00390000009988	ENSGT00940000157222.b	ENSGT00390000018110	ENSGT00390000017400	ENSGT00390000001515	ENSGT00940000153769.F.n	ENSGT00520000055667	ENSGT00940000159019	ENSGT00390000015114	ENSGT00390000009719	ENSGT00390000010209.c.b	ENSGT00950000183186.B.b.c	ENSGT00390000017627.a.a.b	ENSGT00520000055567.b	ENSGT00620000087993.a.b	ENSGT00950000182900.B #22	ENSGT00390000007371.f #23	ENSGT00940000154868.a.b.b	ENSGT00390000016565.g	ENSGT00390000015719.c.c	ENSGT00390000004191	ENSGT00950000183172.B	ENSGT00940000155194.v.b	ENSGT00390000013174	ENSGT00940000156585.c.a	ENSGT00940000165028.a	ENSGT00940000157034	ENSGT00940000157669.a.b	ENSGT00940000155543	ENSGT00940000157582.g	ENSGT00950000183053.A.a.b
Climbing perch	MODERN SPECIES	7	ENSATEG00000023896	ENSATEG00000028035	ENSATEG00000023892	ENSATEG00000023887	mrpl13 (ENSATEG00000028244)	ENSATEG00000023876	deptor (ENSATEG00000023870)	ENSATEG00000030019	lars2 (ENSATEG00000023835)	TMEM158 (ENSATEG00000023829)	cdcp1a (ENSATEG00000023823)	CLEC3B (ENSATEG00000028357)	ENSATEG00000023812	ENSATEG00000023805	ENSATEG00000023798	wdtc1 (ENSATEG00000023785) #22	tmem222a (ENSATEG00000023778) #23	tpbgl (ENSATEG00000023772)	ENSATEG00000023767	nr0b2a (ENSATEG00000023764)	ENSATEG00000023759	gpn2 (ENSATEG00000023756)	pigv (ENSATEG00000023748)	zdhhc18a (ENSATEG00000023739)	tent5ba (ENSATEG00000023735)	tcea3 (ENSATEG00000023720)	oprd1b (ENSATEG00000023714)	rcc1 (ENSATEG00000023708)	phactr4b (ENSATEG00000023687)	ENSATEG00000023675	ENSATEG00000023666
Siamese fighting fish	MODERN SPECIES	7	MRS2 (ENSBSLG00000023966)	ENSBSLG00000023957	CPQ (ENSBSLG00000023912)	dscc1 (ENSBSLG00000023885)	mrpl13 (ENSBSLG00000023852)	COL14A1 (ENSBSLG00000023534)	deptor (ENSBSLG00000023466)	LIMD1 (ENSBSLG00000023356)	lars2 (ENSBSLG00000022914)	cdcp1a (ENSBSLG00000022565)	ENSBSLG00000022563	CLEC3B (ENSBSLG00000022556)	ENSBSLG00000022435	ENSBSLG00000022408	CEP85 (ENSBSLG00000022341)	wdtc1 (ENSBSLG00000022227) #22	tmem222a (ENSBSLG00000022218) #23	tpbgl (ENSBSLG00000022211)	KDF1 (ENSBSLG00000022210)	nr0b2a (ENSBSLG00000022207)	gpatch3 (ENSBSLG00000022200)	gpn2 (ENSBSLG00000022190)	ARID1A (ENSBSLG00000021801)	pigv (ENSBSLG00000021745)	zdhhc18a (ENSBSLG00000021708)	tent5ba (ENSBSLG00000021583)	tcea3 (ENSBSLG00000021546)	oprd1b (ENSBSLG00000021520)	rcc1 (ENSBSLG00000021354)	phactr4b (ENSBSLG00000021291)	ENSBSLG00000021273
Zig-zag eel	MODERN SPECIES	7	ENSMAMG00000023996	ENSMAMG00000023995	ENSMAMG00000023994	ENSMAMG00000023992	mrpl13 (ENSMAMG00000023991)	ENSMAMG00000023990	deptor (ENSMAMG00000023989)	LIMD1 (ENSMAMG00000023988)	lars2 (ENSMAMG00000023987)	TMEM158 (ENSMAMG00000023986)	cdcp1a (ENSMAMG00000023984)	CLEC3B (ENSMAMG00000023985)	ENSMAMG00000023983	ENSMAMG00000023982	ENSMAMG00000023981	wdtc1 (ENSMAMG00000023980) #22	tmem222a (ENSMAMG00000024611) #23	tpbgl (ENSMAMG00000023978)	ENSMAMG00000023977	nr0b2a (ENSMAMG00000023976)	ENSMAMG00000023975	gpn2 (ENSMAMG00000023974)	ARID1A (ENSMAMG00000023973)	pigv (ENSMAMG00000023972)	zdhhc18a (ENSMAMG00000023971)	tent5ba (ENSMAMG00000023970)	tcea3 (ENSMAMG00000023969)	oprd1b (ENSMAMG00000023686)	rcc1 (ENSMAMG00000023676)	phactr4b (ENSMAMG00000023666)	ENSMAMG00000026537
Carangaria	ANCESTRAL SPECIES	1	ENSGT00390000009988	ENSGT00940000157222.b	ENSGT00390000018110	ENSGT00390000017400	ENSGT00390000001515	ENSGT00940000153769.F.n	ENSGT00520000055667	ENSGT00940000159019	ENSGT00390000015114	ENSGT00390000009719	ENSGT00390000010209.c.b	ENSGT00950000183186.B.b.c	ENSGT00390000017627.a.a.b	ENSGT00520000055567.b	ENSGT00620000087993.a.b	ENSGT00950000182900.B #22	ENSGT00390000007371.f #23	ENSGT00940000154868.a.b.b	ENSGT00390000016565.g	ENSGT00390000015719.c.c	ENSGT00390000004191	ENSGT00950000183172.B	ENSGT00940000155194.v.b	ENSGT00390000013174	ENSGT00940000156585.c.a	ENSGT00940000165028.a	ENSGT00940000157034	ENSGT00940000157669.a.b	ENSGT00940000155543	ENSGT00940000157582.g	ENSGT00950000183053.A.a.b
Carangaria_A	ANCESTRAL SPECIES	9	ENSGT00390000009988	ENSGT00940000157222.b	ENSGT00390000018110	ENSGT00390000017400	ENSGT00390000001515	ENSGT00940000153769.F.n	ENSGT00520000055667	ENSGT00940000159019	ENSGT00390000015114	ENSGT00390000009719	ENSGT00390000010209.c.b	ENSGT00950000183186.B.b.c	ENSGT00390000017627.a.a.b	ENSGT00520000055567.b	ENSGT00620000087993.a.b	ENSGT00950000182900.B #22	ENSGT00390000007371.f #23	ENSGT00940000154868.a.b.b	ENSGT00390000016565.g	ENSGT00390000015719.c.c	ENSGT00390000004191	ENSGT00950000183172.B	ENSGT00940000155194.v.b	ENSGT00390000013174	ENSGT00940000156585.c.a	ENSGT00940000165028.a	ENSGT00940000157034	ENSGT00940000157669.a.b	ENSGT00940000155543	ENSGT00940000157582.g	ENSGT00950000183053.A.a.b
Seriola	ANCESTRAL SPECIES	16	ENSGT00390000009988	ENSGT00940000157222.b	ENSGT00390000018110	ENSGT00390000017400	ENSGT00390000001515	ENSGT00940000153769.F.n	ENSGT00520000055667	ENSGT00940000159019	ENSGT00390000015114	ENSGT00390000009719	ENSGT00390000010209.c.b	ENSGT00950000183186.B.b.c	ENSGT00390000017627.a.a.b	ENSGT00520000055567.b	ENSGT00620000087993.a.b	ENSGT00950000182900.B #22	ENSGT00390000007371.f #23	ENSGT00940000154868.a.b.b	ENSGT00390000016565.g	ENSGT00390000015719.c.c	ENSGT00390000004191	ENSGT00950000183172.B	ENSGT00940000155194.v.b	ENSGT00390000013174	ENSGT00940000156585.c.a	ENSGT00940000165028.a	ENSGT00940000157034	ENSGT00940000157669.a.b	ENSGT00940000155543	ENSGT00940000157582.g	ENSGT00950000183053.A.a.b
Greater amberjack	MODERN SPECIES	75	MRS2 (ENSSDUG00000016372)	ENSSDUG00000016394	CPQ (ENSSDUG00000016423)	dscc1 (ENSSDUG00000016477)	mrpl13 (ENSSDUG00000016507)	COL14A1 (ENSSDUG00000016525)	deptor (ENSSDUG00000016646)	LIMD1 (ENSSDUG00000016680)	lars2 (ENSSDUG00000016697)	TMEM158 (ENSSDUG00000016762)	cdcp1a (ENSSDUG00000016773)	CLEC3B (ENSSDUG00000016813)	ENSSDUG00000016827	ENSSDUG00000016879	CEP85 (ENSSDUG00000016947)	wdtc1 (ENSSDUG00000016981) #22	tmem222a (ENSSDUG00000017035) #23	tpbgl (ENSSDUG00000017042)	ENSSDUG00000017048	nr0b2a (ENSSDUG00000017067)	gpatch3 (ENSSDUG00000017071)	gpn2 (ENSSDUG00000017084)	ARID1A (ENSSDUG00000017097)	pigv (ENSSDUG00000017157)	zdhhc18a (ENSSDUG00000017163)	tent5ba (ENSSDUG00000017177)	tcea3 (ENSSDUG00000017192)
Yellowtail amberjack	MODERN SPECIES	2995						ENSSLDG00000017114	deptor (ENSSLDG00000017059)	LIMD1 (ENSSLDG00000017037)	lars2 (ENSSLDG00000016976)	TMEM158 (ENSSLDG00000016958)	cdcp1a (ENSSLDG00000016901)	CLEC3B (ENSSLDG00000016859)	ENSSLDG00000016801	ENSSLDG00000016759	CEP85 (ENSSLDG00000016737)	wdtc1 (ENSSLDG00000016693) #22	tmem222a (ENSSLDG00000016627) #23	tpbgl (ENSSLDG00000016590)	ENSSLDG00000016576	nr0b2a (ENSSLDG00000016566)	gpatch3 (ENSSLDG00000016549)	gpn2 (ENSSLDG00000016533)	ARID1A (ENSSLDG00000016482)	pigv (ENSSLDG00000016450)	zdhhc18a (ENSSLDG00000016425)	tent5ba (ENSSLDG00000016410)	tcea3 (ENSSLDG00000016343)	oprd1b (ENSSLDG00000016293)	rcc1 (ENSSLDG00000016252)	ENSSLDG00000016201	ENSSLDG00000016182
Barramundi perch	MODERN SPECIES	17	CPQ (ENSLCAG00010004593)	dscc1 (ENSLCAG00010004610)	mrpl13 (ENSLCAG00010004616)	COL14A1 (ENSLCAG00010004721)	deptor (ENSLCAG00010005241)	ENSLCAG00010005246	ENSLCAG00010005250	lars2 (ENSLCAG00010005379)	TMEM158 (ENSLCAG00010005866)	cdcp1a (ENSLCAG00010005869)	ENSLCAG00010005874	CLEC3B (ENSLCAG00010005878)	ENSLCAG00010005885	ENSLCAG00010005892	CEP85 (ENSLCAG00010005896)	wdtc1 (ENSLCAG00010005904) #22	tmem222a (ENSLCAG00010005916) #23	tpbgl (ENSLCAG00010005921)	ENSLCAG00010005924	nr0b2a (ENSLCAG00010005929)	gpatch3 (ENSLCAG00010005931)	gpn2 (ENSLCAG00010005939)	ARID1A (ENSLCAG00010005961)	pigv (ENSLCAG00010006015)	zdhhc18a (ENSLCAG00010006030)	tent5ba (ENSLCAG00010006052)	tcea3 (ENSLCAG00010006056)	oprd1b (ENSLCAG00010006067)	rcc1 (ENSLCAG00010006074)	phactr4b (ENSLCAG00010006089)	ENSLCAG00010006098
Pleuronectoidei	ANCESTRAL SPECIES	3	ENSGT00390000009988	ENSGT00940000157222.b	ENSGT00390000018110	ENSGT00390000017400	ENSGT00390000001515	ENSGT00940000153769.F.n	ENSGT00520000055667	ENSGT00940000159019	ENSGT00390000015114	ENSGT00390000009719	ENSGT00390000010209.c.b	ENSGT00950000183186.B.b.c	ENSGT00390000017627.a.a.b	ENSGT00520000055567.b	ENSGT00620000087993.a.b	ENSGT00950000182900.B #22	ENSGT00390000007371.f #23	ENSGT00940000154868.a.b.b	ENSGT00390000016565.g	ENSGT00390000015719.c.c	ENSGT00390000004191	ENSGT00950000183172.B	ENSGT00940000155194.v.b	ENSGT00390000013174	ENSGT00940000156585.c.a	ENSGT00940000165028.a	ENSGT00940000157034	ENSGT00940000157669.a.b	ENSGT00940000155543	ENSGT00940000157582.g	ENSGT00950000183053.A.a.b
Turbot	MODERN SPECIES		ENSSMAG00000002628	ENSSMAG00000002622	ENSSMAG00000002602	ENSSMAG00000002581	mrpl13 (ENSSMAG00000002558)	ENSSMAG00000002502	deptor (ENSSMAG00000002445)	LIMD1 (ENSSMAG00000002424)	lars2 (ENSSMAG00000002353)	TMEM158 (ENSSMAG00000026497)	cdcp1a (ENSSMAG00000002303)	CLEC3B (ENSSMAG00000002297)	ENSSMAG00000002284	ENSSMAG00000002239	ENSSMAG00000002177	wdtc1 (ENSSMAG00000002132) #22	tmem222a (ENSSMAG00000002110) #23	tpbgl (ENSSMAG00000002097)	ENSSMAG00000033964	nr0b2a (ENSSMAG00000002080)	ENSSMAG00000002067	gpn2 (ENSSMAG00000002056)	ARID1A (ENSSMAG00000002033)	pigv (ENSSMAG00000002024)	zdhhc18a (ENSSMAG00000002019)	tent5ba (ENSSMAG00000002009)	tcea3 (ENSSMAG00000001986)	oprd1b (ENSSMAG00000001952)	rcc1 (ENSSMAG00000001903)	phactr4b (ENSSMAG00000001764)	ENSSMAG00000031889
Tongue sole	MODERN SPECIES	4	ENSCSEG00000005099	ENSCSEG00000005115	ENSCSEG00000005134	sntb1 (ENSCSEG00000005142)	ENSCSEG00000005153	COL14A1 (ENSCSEG00000005157)	deptor (ENSCSEG00000005169)	LIMD1 (ENSCSEG00000005191)	lars2 (ENSCSEG00000005202)	TMEM158 (ENSCSEG00000005214)	cdcp1a (ENSCSEG00000005216)	CLEC3B (ENSCSEG00000005231)	ENSCSEG00000005225	ENSCSEG00000005234	CEP85 (ENSCSEG00000005242)	wdtc1 (ENSCSEG00000005252) #22	tmem222a (ENSCSEG00000005261) #23	tpbgl (ENSCSEG00000005271)	ENSCSEG00000005272	nr0b2a (ENSCSEG00000005273)	gpatch3 (ENSCSEG00000005277)	gpn2 (ENSCSEG00000005283)	ARID1A (ENSCSEG00000005289)	pigv (ENSCSEG00000005298)	zdhhc18a (ENSCSEG00000005303)	tent5ba (ENSCSEG00000005309)	tcea3 (ENSCSEG00000005315)	oprd1b (ENSCSEG00000005330)	rcc1 (ENSCSEG00000005334)	phactr4b (ENSCSEG00000005337)	ENSCSEG00000005342
Tiger tail seahorse	MODERN SPECIES	347	ENSHCOG00000005372	hoxa11b (ENSHCOG00000005381)	hoxa13b (ENSHCOG00000005392)	hibadhb (ENSHCOG00000005406)	tax1bp1b (ENSHCOG00000005423)	JAZF1 (ENSHCOG00000005436)	CREB5 (ENSHCOG00000005447)	cpvl (ENSHCOG00000005489)	CHN2 (ENSHCOG00000005526)	fkbp14 (ENSHCOG00000005537)	plekha8 (ENSHCOG00000005546)	COLQ (ENSHCOG00000005569)	hacl1 (ENSHCOG00000005594)	ENSHCOG00000005643	CEP85 (ENSHCOG00000005656)	wdtc1 (ENSHCOG00000005698) #22	tmem222a (ENSHCOG00000005706) #23	tpbgl (ENSHCOG00000005717)	ENSHCOG00000005726	nr0b2a (ENSHCOG00000005733)	gpatch3 (ENSHCOG00000005739)	gpn2 (ENSHCOG00000005756)	ARID1A (ENSHCOG00000005766)	pigv (ENSHCOG00000005775)	zdhhc18a (ENSHCOG00000005820)	tent5ba (ENSHCOG00000005840)	tcea3 (ENSHCOG00000005864)	oprd1b (ENSHCOG00000006474)	rcc1 (ENSHCOG00000006534)	phactr4b (ENSHCOG00000006576)	ENSHCOG00000006601
Pinecone sodierfish	MODERN SPECIES	7	ENSMMDG00005010496	CPQ (ENSMMDG00005010507)	dscc1 (ENSMMDG00005010728)	mrpl13 (ENSMMDG00005010739)	ENSMMDG00005010764	ENSMMDG00005010769	deptor (ENSMMDG00005010773)	LIMD1 (ENSMMDG00005010776)	lars2 (ENSMMDG00005010819)	cdcp1a (ENSMMDG00005014089)	CLEC3B (ENSMMDG00005014092)	ENSMMDG00005014095	ENSMMDG00005014097	ENSMMDG00005014099	CEP85 (ENSMMDG00005014101)	wdtc1 (ENSMMDG00005014107) #22	tmem222a (ENSMMDG00005014430) #23	tpbgl (ENSMMDG00005014485)	nr0b2a (ENSMMDG00005014497)	gpn2 (ENSMMDG00005014502)	ARID1A (ENSMMDG00005014527)	pigv (ENSMMDG00005015036)	zdhhc18a (ENSMMDG00005015039)	tent5ba (ENSMMDG00005015044)	ENSMMDG00005015048	tcea3 (ENSMMDG00005015050)	oprd1b (ENSMMDG00005015052)	rcc1 (ENSMMDG00005015055)	phactr4b (ENSMMDG00005015066)	ENSMMDG00005015069	HIVEP3 (ENSMMDG00005015072)
Cod	MODERN SPECIES	19	ENSGMOG00000032215	ENSGMOG00000018314	ENSGMOG00000018290	ENSGMOG00000023957	ENSGMOG00000035024	ENSGMOG00000007215	ENSGMOG00000014462	ENSGMOG00000018220	LIMD1 (ENSGMOG00000029782)	lars2 (ENSGMOG00000000795)	cdcp1a (ENSGMOG00000036986)	CLEC3B (ENSGMOG00000000871)	ENSGMOG00000000872	ENSGMOG00000000889	ENSGMOG00000000903	wdtc1 (ENSGMOG00000000939) #22	tmem222a (ENSGMOG00000000961) #23	tpbgl (ENSGMOG00000026520)	ENSGMOG00000024982	nr0b2a (ENSGMOG00000000984)	GPATCH3 (ENSGMOG00000000991)	gpn2 (ENSGMOG00000001010)	ARID1A (ENSGMOG00000001024)	pigv (ENSGMOG00000001161)	zdhhc18a (ENSGMOG00000001179)	tent5ba (ENSGMOG00000019728)	RNF146 (ENSGMOG00000035264)	trmt11 (ENSGMOG00000006618)	ENSGMOG00000034923	hint3 (ENSGMOG00000006588)	eva1ba (ENSGMOG00000033967)
Protacanthopterygii	ANCESTRAL SPECIES	50	ENSGT00950000183086.a.b	ENSGT00940000156605	ENSGT00390000017343	ENSGT01000000214413.b.a.b.a.a	ENSGT00940000159164	ENSGT00940000156036	ENSGT00510000054197	ENSGT00390000001745.a	ENSGT01030000234575.c.a.a.a.a.a.a.b.a.d	ENSGT01060000249076	ENSGT01030000234575.c.a.a.a.a.a.a.b.a.c	ENSGT00940000159873	ENSGT00940000165779	ENSGT00520000055567.b	ENSGT00620000087993.a.b	ENSGT00950000182900.B #22	ENSGT00390000007371.f #23	ENSGT00940000154868.a.b.b	ENSGT00390000016565.g	ENSGT00390000015719.c.c	ENSGT00940000156446	ENSGT00920000149172	ENSGT00950000183051.a.a.b	ENSGT00940000160839	ENSGT00940000156787	ENSGT01000000219127	ENSGT00940000171486.A	ENSGT00390000014772.l	ENSGT01050000244841.A.b.a.b.a.a	ENSGT00940000159356.a.a	ENSGT00940000157616.j.b
Salmoninae	DUPLICATION
Salmoninae	ANCESTRAL SPECIES	32	ENSGT00390000017343.s	ENSGT01000000214413.b.a.b.a.a.a	ENSGT00940000159164.d	ENSGT00940000156036.ob	ENSGT00510000054197	ENSGT00390000001745.a.a	ENSGT01030000234575.c.a.a.a.a.a.a.b.a.c.a	ENSGT00940000159873.j	ENSGT00390000001745.a.b	ENSGT01030000234575.c.a.a.a.a.a.a.b.a.d	ENSGT01030000234575.c.a.a.a.a.a.a.b.a.c.b.a	ENSGT00940000159873.i.a	ENSGT00940000165779	ENSGT00520000055567.b	ENSGT00620000087993.a.b.i	ENSGT00950000182900.B.c #22	ENSGT00390000007371.f.d #23	ENSGT00940000154868.a.b.b	ENSGT00390000016565.g.f	ENSGT00390000015719.c.c.c	ENSGT00940000156446.db.a	ENSGT00920000149172.d	ENSGT00950000183051.a.a.b.a	ENSGT00940000160839.f	ENSGT00940000156787.b	ENSGT00390000014772.l.mc.a	ENSGT01050000244841.A.b.a.b.a.a.a	ENSGT00940000159356.a.a.e	ENSGT00940000157616.j.b.c	ENSGT00390000003774.a.a.d.b	ENSGT00940000166468
Salmoninae_a	ANCESTRAL SPECIES	39	ENSGT01030000234564.b.e	ENSGT00950000183086.a.b.d	ENSGT00940000156605.t	ENSGT00390000017343.s	ENSGT01000000214413.b.a.b.a.a.a	ENSGT00940000159164.d	ENSGT00940000156036.ob	ENSGT00510000054197.m	ENSGT00390000001745.a.b	ENSGT01030000234575.c.a.a.a.a.a.a.b.a.d	ENSGT01030000234575.c.a.a.a.a.a.a.b.a.c.b.a	ENSGT00940000159873.i.a	ENSGT00940000165779	ENSGT00520000055567.b	ENSGT00620000087993.a.b.i	ENSGT00950000182900.B.c #22	ENSGT00390000007371.f.d.a.a #23	ENSGT00940000154868.a.b.b.d	ENSGT00390000016565.g.f	ENSGT00390000015719.c.c.c	ENSGT00940000156446.db.a	ENSGT00920000149172.d	ENSGT00950000183051.a.a.b.a	ENSGT00940000160839.f	ENSGT00940000156787.b	ENSGT01000000219127	ENSGT00940000171486.A.b	ENSGT00390000014772.l.mc.b	ENSGT01050000244841.A.b.a.b.a.a.b	ENSGT00940000159356.a.a.f	ENSGT00940000157616.j.b.d
Oncorhynchus	ANCESTRAL SPECIES	38	ENSGT00940000156605.t	ENSGT00390000017343.s	ENSGT01000000214413.b.a.b.a.a.a	ENSGT00940000159164.d	ENSGT00940000156036.ob	ENSGT00510000054197.m	ENSGT00390000001745.a.b	ENSGT01030000234575.c.a.a.a.a.a.a.b.a.d	ENSGT01060000249076.b	ENSGT01030000234575.c.a.a.a.a.a.a.b.a.c.b.a	ENSGT00940000159873.i.a	ENSGT00940000165779	ENSGT00520000055567.b	ENSGT00620000087993.a.b.i.b	ENSGT00620000087993.a.b.i.a	ENSGT00950000182900.B.c #22	ENSGT00390000007371.f.d.a.a #23	ENSGT00940000154868.a.b.b.d	ENSGT00390000016565.g.f	ENSGT00390000015719.c.c.c	ENSGT00940000156446.db.a	ENSGT00920000149172.d	ENSGT00950000183051.a.a.b.a	ENSGT00940000160839.f	ENSGT01000000219127	ENSGT00940000156787.b	ENSGT00940000171486.A.b	ENSGT00390000014772.l.mc.b	ENSGT01050000244841.A.b.a.b.a.a.b	ENSGT00940000159356.a.a.f	ENSGT00940000157616.j.b.d
Rainbow trout	MODERN SPECIES	11	lpcat3 (ENSOMYG00000032492)	ENSOMYG00000032848	pex5 (ENSOMYG00000034258)	cdca3 (ENSOMYG00000034623)	gnb3a (ENSOMYG00000034626)	P3H3 (ENSOMYG00000034632)	usp5 (ENSOMYG00000034682)	ENSOMYG00000034790	cd4-1 (ENSOMYG00000034801)	ENSOMYG00000034819	cldc1 (ENSOMYG00000034835)	ENSOMYG00000034866	si:ch211-154o6.3 (ENSOMYG00000034899)	ENSOMYG00000034924	ENSOMYG00000034941	wdtc1 (ENSOMYG00000035008) #22	ENSOMYG00000057152	tpbgl (ENSOMYG00000074373)	ENSOMYG00000035439	nr0b2a (ENSOMYG00000035445)	ZNF407 (ENSOMYG00000035459)	PTGR3 (ENSOMYG00000035472)	TSHZ1 (ENSOMYG00000035486)	ZNF516 (ENSOMYG00000035494)	ZNF236 (ENSOMYG00000035528)	ENSOMYG00000064197	mbpb (ENSOMYG00000068618)	GALR1 (ENSOMYG00000058662)	ENSOMYG00000035556	SALL3 (ENSOMYG00000035569)	ENSOMYG00000060359
Oncorhynchus_a	ANCESTRAL SPECIES	39	ENSGT00950000183086.a.b.d	ENSGT00940000156605.t	ENSGT00390000017343.s	ENSGT01000000214413.b.a.b.a.a.a	ENSGT00940000159164.d	ENSGT00940000156036.ob	ENSGT00510000054197.m	ENSGT00390000001745.a.b	ENSGT01030000234575.c.a.a.a.a.a.a.b.a.d	ENSGT01030000234575.c.a.a.a.a.a.a.b.a.c.b.a	ENSGT00940000159873.i.a	ENSGT00940000165779	ENSGT00520000055567.b	ENSGT00620000087993.a.b.i.b	ENSGT00620000087993.a.b.i.a	ENSGT00950000182900.B.c #22	ENSGT00390000007371.f.d.a.a #23	ENSGT00940000154868.a.b.b.d	ENSGT00390000016565.g.f	ENSGT00390000015719.c.c.c	ENSGT00940000156446.db.a	ENSGT00920000149172.d	ENSGT00950000183051.a.a.b.a	ENSGT00940000160839.f	ENSGT00940000156787.b	ENSGT01000000219127	ENSGT00940000171486.A.b	ENSGT00390000014772.l.mc.b	ENSGT01050000244841.A.b.a.b.a.a.b	ENSGT00940000159356.a.a.f	ENSGT00940000157616.j.b.d
Coho salmon	MODERN SPECIES	4	pex5 (ENSOKIG00005005846)	cdca3 (ENSOKIG00005005809)	gnb3a (ENSOKIG00005005801)	P3H3 (ENSOKIG00005005779)	usp5 (ENSOKIG00005004427)	ENSOKIG00005004157	cd4-1 (ENSOKIG00005004142)	ENSOKIG00005004127	cldc1 (ENSOKIG00005004106)	cops7a (ENSOKIG00005004092)	si:ch211-154o6.3 (ENSOKIG00005004068)	ENSOKIG00005004046	ENSOKIG00005004038	ENSOKIG00005004034	ENSOKIG00005004016	wdtc1 (ENSOKIG00005003873) #22	tmem222a (ENSOKIG00005003814) #23	ENSOKIG00005026204	tpbgl (ENSOKIG00005026203)	KDF1 (ENSOKIG00005026199)	nr0b2a (ENSOKIG00005026188)	ZNF407 (ENSOKIG00005026123)	PTGR3 (ENSOKIG00005026070)	TSHZ1 (ENSOKIG00005026057)	ENSOKIG00005026049	ENSOKIG00005026038	ENSOKIG00005026023	ZNF236 (ENSOKIG00005025952)	ENSOKIG00005025929	mbpb (ENSOKIG00005025916)	GALR1 (ENSOKIG00005025890)
Chinook salmon	MODERN SPECIES	251												cops7a (ENSOTSG00005038344)	si:ch211-154o6.3 (ENSOTSG00005038374)	ENSOTSG00005038375	ENSOTSG00005038377	wdtc1 (ENSOTSG00005038387) #22	tmem222a (ENSOTSG00005038907) #23	tpbgl (ENSOTSG00005038946)	KDF1 (ENSOTSG00005038949)	nr0b2a (ENSOTSG00005038952)
Salmo	ANCESTRAL SPECIES	1	ENSGT01030000234564.b.e	ENSGT00950000183086.a.b.d	ENSGT00940000156605.t	ENSGT00390000017343.s	ENSGT01000000214413.b.a.b.a.a.a	ENSGT00940000159164.d	ENSGT00940000156036.ob	ENSGT00510000054197.m	ENSGT00390000001745.a.b	ENSGT01030000234575.c.a.a.a.a.a.a.b.a.d	ENSGT01030000234575.c.a.a.a.a.a.a.b.a.c.b.a	ENSGT00940000159873.i.b	ENSGT00940000165779.c	ENSGT00520000055567.b	ENSGT00620000087993.a.b.i	ENSGT00950000182900.B.c #22	ENSGT00390000007371.f.c.b.b #23	ENSGT00940000154868.a.b.b.d	ENSGT00390000016565.g.f	ENSGT00390000015719.c.c.c	ENSGT00940000156446.db.a	ENSGT00920000149172.d	ENSGT00950000183051.a.a.b.a	ENSGT00940000160839.f	ENSGT01000000219127	ENSGT00940000156787.b	ENSGT00940000171486.A.b	ENSGT00390000014772.l.mc.b	ENSGT01050000244841.A.b.a.b.a.a.b	ENSGT00940000159356.a.a.f	ENSGT00940000157616.j.b.d
River trout	MODERN SPECIES	22	lpcat3 (ENSSTUG00000005244)	CLSTN3 (ENSSTUG00000004516)	pex5 (ENSSTUG00000004383)	cdca3 (ENSSTUG00000004369)	gnb3a (ENSSTUG00000004348)	P3H3 (ENSSTUG00000004315)	usp5 (ENSSTUG00000002931)	CD4-2b (ENSSTUG00000002855)	cd4-1 (ENSSTUG00000002816)	cldc1 (ENSSTUG00000002795)	cldc1 (ENSSTUG00000002763)	cops7a (ENSSTUG00000002740)	si:ch211-154o6.3 (ENSSTUG00000002704)	ENSSTUG00000002687	CEP85 (ENSSTUG00000002648)	wdtc1 (ENSSTUG00000002419) #22	tmem222a (ENSSTUG00000002395) #23	tpbgl (ENSSTUG00000002387)	KDF1 (ENSSTUG00000002381)	nr0b2a (ENSSTUG00000002363)	ZNF407 (ENSSTUG00000002289)	PTGR3 (ENSSTUG00000002224)	TSHZ1 (ENSSTUG00000002217)	ENSSTUG00000002212	ZNF516 (ENSSTUG00000002205)	ENSSTUG00000002197	ZNF236 (ENSSTUG00000002170)	ENSSTUG00000002160	mbpb (ENSSTUG00000002150)	GALR1 (ENSSTUG00000002145)	ENSSTUG00000002144
Atlantic salmon	MODERN SPECIES	24	ENSSSAG00000101463	lpcat3 (ENSSSAG00000042957)	ENSSSAG00000076017	pex5 (ENSSSAG00000041515)	cdca3 (ENSSSAG00000040417)	gnb3a (ENSSSAG00000041241)	P3H3 (ENSSSAG00000041212)	usp5 (ENSSSAG00000040926)	ENSSSAG00000040842	cd4-1 (ENSSSAG00000040774)	CLC4E (ENSSSAG00000040735)	ENSSSAG00000040658	ENSSSAG00000040620	ENSSSAG00000040491	ENSSSAG00000040435	ENSSSAG00000039109 #22	ENSSSAG00000040386	tpbgl (ENSSSAG00000039024)	ENSSSAG00000038969	nr0b2a (ENSSSAG00000038883)	ENSSSAG00000109771	ZNF407 (ENSSSAG00000037948)	PTGR3 (ENSSSAG00000036059)	TSHZ1 (ENSSSAG00000035735)	ZNF516 (ENSSSAG00000035325)	ZNF236 (ENSSSAG00000034272)	ENSSSAG00000104955	mbpb (ENSSSAG00000033944)	GALR1 (ENSSSAG00000103605)	ENSSSAG00000094103	SALL3 (ENSSSAG00000033555)
Huchen	MODERN SPECIES	45	lpcat3 (ENSHHUG00000015196)	CLSTN3 (ENSHHUG00000015132)	pex5 (ENSHHUG00000015069)	cdca3 (ENSHHUG00000015055)	gnb3a (ENSHHUG00000015015)	P3H3 (ENSHHUG00000015009)	usp5 (ENSHHUG00000014491)	ENSHHUG00000014466	cd4-1 (ENSHHUG00000014428)	cldc1 (ENSHHUG00000014398)	cldc1 (ENSHHUG00000014348)	ENSHHUG00000014334	si:ch211-154o6.3 (ENSHHUG00000014325)	ENSHHUG00000014301	CEP85 (ENSHHUG00000014282)	wdtc1 (ENSHHUG00000014182) #22	tmem222a (ENSHHUG00000014174) #23	ENSHHUG00000014166	KDF1 (ENSHHUG00000014161)	nr0b2a (ENSHHUG00000014156)	ENSHHUG00000014153	ENSHHUG00000014148	PTGR3 (ENSHHUG00000014145)	TSHZ1 (ENSHHUG00000014141)	ZNF516 (ENSHHUG00000014117)	ZNF236 (ENSHHUG00000014041)	mbpb (ENSHHUG00000014011)	GALR1 (ENSHHUG00000013988)	SALL3 (ENSHHUG00000013967)	NFATC1 (ENSHHUG00000013952)	zgc:91890 (ENSHHUG00000013928)
Salmoninae	ANCESTRAL SPECIES	1179														ENSGT00960000191430	ENSGT00620000087993.a.b.j	ENSGT00950000182900.B.d #22	ENSGT00390000007371.f.c.b.a #23
Salmoninae_a	ANCESTRAL SPECIES	90														ENSGT00960000191430	ENSGT00620000087993.a.b.j	ENSGT00950000182900.B.d #22	ENSGT00390000007371.f.d.a.b #23	ENSGT00940000154868.a.b.b.c	ENSGT00390000016565.g.e	ENSGT00390000015719.c.c.d	ENSGT00940000156446.db.b	ENSGT00920000149172.c	ENSGT00950000183051.a.a.b.b	ENSGT00940000160839.e	ENSGT00940000156787.a	ENSGT00940000171486.A.a	ENSGT00390000014772.l.mc.a	ENSGT01050000244841.A.b.a.b.a.a.a	ENSGT00940000159356.a.a.e	ENSGT00940000157616.j.b.c	ENSGT00390000003774.a.a.d.b
Oncorhynchus	ANCESTRAL SPECIES	95	ENSGT01030000234564.b.f	ENSGT00950000183086.a.b.c	ENSGT00940000156605.s	ENSGT00390000017343.t	ENSGT01000000214413.b.a.b.a.a.b	ENSGT00940000159164.c	ENSGT00940000156036.nb	ENSGT00510000054197.n	ENSGT00390000001745.a.a	ENSGT01060000249076.a	ENSGT01030000234575.c.a.a.a.a.a.a.b.a.c.a	ENSGT00940000159873.j	ENSGT00990000211197	ENSGT00960000191430	ENSGT00620000087993.a.b.j	ENSGT00950000182900.B.d #22	ENSGT00390000007371.f.d.a.b #23	ENSGT00940000154868.a.b.b.c	ENSGT00390000016565.g.e	ENSGT00390000015719.c.c.d	ENSGT00940000156446.db.b	ENSGT00920000149172.c	ENSGT00950000183051.a.a.b.b	ENSGT00940000160839.e	ENSGT00940000156787.a	ENSGT00940000171486.A.a	ENSGT00390000014772.l.mc.a	ENSGT01050000244841.A.b.a.b.a.a.a	ENSGT00940000159356.a.a.e	ENSGT00940000157616.j.b.c	ENSGT00390000003774.a.a.d.b
Oncorhynchus_a	ANCESTRAL SPECIES	8	ENSGT00390000016054.b.i.e.a	ENSGT00940000153295.a.a.c	ENSGT00940000156592.`b.b	ENSGT00950000183182.a.a	ENSGT00390000010045.s.b	ENSGT00530000063770.c.a.g.a	ENSGT00530000063770.c.a.h	ENSGT00940000156115.d.b #34	ENSGT00940000161527.w.a	ENSGT00390000003312.a	ENSGT00940000165224.a.b.c	ENSGT00940000165134.a.b.f.a.a.b	ENSGT00990000211197	ENSGT00960000191430	ENSGT00620000087993.a.b.j	ENSGT00950000182900.B.d #22	ENSGT00390000007371.f.d.a.b #23	ENSGT00940000154868.a.b.b.c	ENSGT00390000016565.g.e	ENSGT00390000015719.c.c.d	ENSGT00940000156446.db.b	ENSGT00920000149172.c	ENSGT00950000183051.a.a.b.b	ENSGT00940000160839.e	ENSGT00940000156787.a	ENSGT00940000171486.A.a	ENSGT00390000014772.l.mc.a	ENSGT01050000244841.A.b.a.b.a.a.a	ENSGT00940000159356.a.a.e	ENSGT00940000157616.j.b.c	ENSGT00390000003774.a.a.d.b
Chinook salmon	DUPLICATION
Chinook salmon	DUPLICATION
Chinook salmon	MODERN SPECIES	2926	ENSOTSG00005024174	ENSOTSG00005024175	tpi1b (ENSOTSG00005024176)	lpcat3 (ENSOTSG00005024179)	ENSOTSG00005024273	pex5 (ENSOTSG00005026953)	cdca3 (ENSOTSG00005027061)	gnb3a (ENSOTSG00005027063)	P3H3 (ENSOTSG00005027065)	usp5 (ENSOTSG00005027069)	ENSOTSG00005027269	cd4-1 (ENSOTSG00005027270)	cldc1 (ENSOTSG00005027271)	cops7a (ENSOTSG00005027273)	CEP85 (ENSOTSG00005027276)	wdtc1 (ENSOTSG00005027278) #22	tmem222a (ENSOTSG00005027323) #23	tpbgl (ENSOTSG00005027324)	KDF1 (ENSOTSG00005027326)	nr0b2a (ENSOTSG00005027327)	ENSOTSG00005027328	ENSOTSG00005027329	PTGR3 (ENSOTSG00005027331)	TSHZ1 (ENSOTSG00005027332)	ZNF516 (ENSOTSG00005027333)	fstl4 (ENSOTSG00005027338)	C5orf15 (ENSOTSG00005029711)	vdac1 (ENSOTSG00005029712)	tcf7 (ENSOTSG00005029726)	SKP1 (ENSOTSG00005029727)	ppp2cab (ENSOTSG00005029728)
Chinook salmon	MODERN SPECIES	22	tpi1b (ENSOTSG00005006172)	lpcat3 (ENSOTSG00005006159)	ENSOTSG00005004015	ENSOTSG00005003978	pex5 (ENSOTSG00005003971)	cdca3 (ENSOTSG00005003967)	gnb3a (ENSOTSG00005003963)	P3H3 (ENSOTSG00005003957)	usp5 (ENSOTSG00005003949)	ENSOTSG00005003947	cd4-1 (ENSOTSG00005003946)	ENSOTSG00005003941	cldc1 (ENSOTSG00005003932)	cops7a (ENSOTSG00005003929)	CEP85 (ENSOTSG00005003927)	wdtc1 (ENSOTSG00005002449) #22	tmem222a (ENSOTSG00005002429) #23	tpbgl (ENSOTSG00005002426)	KDF1 (ENSOTSG00005002420)	nr0b2a (ENSOTSG00005002415)	ZNF407 (ENSOTSG00005002308)	PTGR3 (ENSOTSG00005002302)	TSHZ1 (ENSOTSG00005002300)	ZNF516 (ENSOTSG00005002293)	ZNF236 (ENSOTSG00005002226)	ENSOTSG00005002218	mbpb (ENSOTSG00005002216)	GALR1 (ENSOTSG00005002214)	SALL3 (ENSOTSG00005002213)	NFATC1 (ENSOTSG00005002159)	zgc:91890 (ENSOTSG00005002146)
Chinook salmon	MODERN SPECIES	22	ENSOTSG00005000231	tpi1b (ENSOTSG00005000232)	lpcat3 (ENSOTSG00005000234)	CLSTN3 (ENSOTSG00005000255)	pex5 (ENSOTSG00005004377)	cdca3 (ENSOTSG00005004379)	gnb3a (ENSOTSG00005004381)	P3H3 (ENSOTSG00005004386)	usp5 (ENSOTSG00005004398)	ENSOTSG00005004577	cd4-1 (ENSOTSG00005004579)	ENSOTSG00005004582	cldc1 (ENSOTSG00005004584)	cops7a (ENSOTSG00005004586)	CEP85 (ENSOTSG00005004587)	wdtc1 (ENSOTSG00005004596) #22	tmem222a (ENSOTSG00005004796) #23	tpbgl (ENSOTSG00005004798)	KDF1 (ENSOTSG00005004800)	nr0b2a (ENSOTSG00005004802)	ZNF407 (ENSOTSG00005004803)	PTGR3 (ENSOTSG00005004805)	TSHZ1 (ENSOTSG00005004808)	ZNF516 (ENSOTSG00005004810)	ZNF236 (ENSOTSG00005004834)	ENSOTSG00005005027	mbpb (ENSOTSG00005005029)	GALR1 (ENSOTSG00005005032)	SALL3 (ENSOTSG00005005033)	NFATC1 (ENSOTSG00005005036)	zgc:91890 (ENSOTSG00005005063)
Coho salmon	MODERN SPECIES	11	ENSOKIG00005023536	pex5 (ENSOKIG00005025963)	cdca3 (ENSOKIG00005026097)	gnb3a (ENSOKIG00005026110)	P3H3 (ENSOKIG00005026118)	ENSOKIG00005026146	usp5 (ENSOKIG00005026160)	ENSOKIG00005026298	cd4-1 (ENSOKIG00005026315)	ENSOKIG00005026352	ENSOKIG00005026392	COPS7A (ENSOKIG00005026420)	ENSOKIG00005026456	ENSOKIG00005026516	ENSOKIG00005026536	wdtc1 (ENSOKIG00005026559) #22	tmem222a (ENSOKIG00005026780) #23	tpbgl (ENSOKIG00005026795)	KDF1 (ENSOKIG00005026802)	nr0b2a (ENSOKIG00005026816)	ZNF407 (ENSOKIG00005026831)	PTGR3 (ENSOKIG00005026950)	TSHZ1 (ENSOKIG00005026959)	ZNF516 (ENSOKIG00005026972)	ZNF236 (ENSOKIG00005027003)	ENSOKIG00005027049	mbpb (ENSOKIG00005027064)	GALR1 (ENSOKIG00005027078)	SALL3 (ENSOKIG00005027111)	NFATC1 (ENSOKIG00005027131)	zgc:91890 (ENSOKIG00005027165)
Rainbow trout	MODERN SPECIES	21	pex5 (ENSOMYG00000000591)	cdca3 (ENSOMYG00000000647)	gnb3a (ENSOMYG00000000654)	ENSOMYG00000052750	P3H3 (ENSOMYG00000000678)	usp5 (ENSOMYG00000000737)	ENSOMYG00000000748	cd4-2.2 (ENSOMYG00000000792)	cd4-1 (ENSOMYG00000000824)	cd209 (ENSOMYG00000000828)	ENSOMYG00000000836	ENSOMYG00000000849	ENSOMYG00000000867	ENSOMYG00000058000	ENSOMYG00000000880	wdtc1 (ENSOMYG00000000892) #22	tmem222a (ENSOMYG00000000900) #23	tpbgl (ENSOMYG00000072556)	ENSOMYG00000000924	nr0b2a (ENSOMYG00000000941)	ENSOMYG00000064514	ZNF407 (ENSOMYG00000072638)	ENSOMYG00000072387	PTGR3 (ENSOMYG00000000954)	TSHZ1 (ENSOMYG00000000961)	ZNF516 (ENSOMYG00000000977)	ZNF236 (ENSOMYG00000001055)	ENSOMYG00000064884	mbpb (ENSOMYG00000077327)	GALR1 (ENSOMYG00000001126)	SALL3 (ENSOMYG00000001150)
Salmo	ANCESTRAL SPECIES	32	ENSGT01030000234564.b.f	ENSGT00950000183086.a.b.c	ENSGT00940000156605.s	ENSGT00390000017343.t	ENSGT01000000214413.b.a.b.a.a.b	ENSGT00940000159164.c	ENSGT00940000156036.nb	ENSGT00510000054197.n	ENSGT00390000001745.a.a	ENSGT01030000234575.c.a.a.a.a.a.a.b.a.c.a	ENSGT01060000249076	ENSGT01030000234575.c.a.a.a.a.a.a.b.a.c.b.b	ENSGT00940000159873.i.a	ENSGT00940000165779.d	ENSGT00620000087993.a.b.j	ENSGT00950000182900.B.d #22	ENSGT00390000007371.f.d.a.b #23	ENSGT00940000154868.a.b.b.c	ENSGT00390000016565.g.e	ENSGT00390000015719.c.c.d	ENSGT00940000156446.db.b	ENSGT00920000149172.c	ENSGT00950000183051.a.a.b.b	ENSGT00940000160839.e	ENSGT00940000156787.a	ENSGT00940000171486.A.a	ENSGT00390000014772.l.lc	ENSGT01050000244841.A.b.a.b.a.a.a	ENSGT00940000159356.a.a.e	ENSGT00940000157616.j.b.c	ENSGT00390000003774.a.a.d.b
Atlantic salmon	MODERN SPECIES	11	tpi1b (ENSSSAG00000075879)	lpcat3 (ENSSSAG00000075901)	ENSSSAG00000041675	pex5 (ENSSSAG00000076465)	gnb3a (ENSSSAG00000076512)	cdca3 (ENSSSAG00000076509)	ENSSSAG00000076532	usp5 (ENSSSAG00000076540)	ENSSSAG00000076595	cd4-1 (ENSSSAG00000076631)	ENSSSAG00000076652	C209E (ENSSSAG00000076658)	csn7a (ENSSSAG00000076662)	si:ch211-154o6.3 (ENSSSAG00000076670)	ENSSSAG00000076685	wdtc1 (ENSSSAG00000076694) #22	tmem222a (ENSSSAG00000076801) #23	tpbgl (ENSSSAG00000117301)	ENSSSAG00000076816	nr0b2 (ENSSSAG00000076817)	ZNF407 (ENSSSAG00000085595)	zadh2 (ENSSSAG00000076818)	TSHZ1 (ENSSSAG00000076821)	ENSSSAG00000093355	ZNF516 (ENSSSAG00000076825)	ZNF236 (ENSSSAG00000076830)	ENSSSAG00000093220	mbpb (ENSSSAG00000076838)	GALR1 (ENSSSAG00000033629)	ENSSSAG00000098916	SALL3 (ENSSSAG00000108951)
River trout	MODERN SPECIES	30	ENSSTUG00000047162	ENSSTUG00000047164	tpi1b (ENSSTUG00000047169)	lpcat3 (ENSSTUG00000047194)	CLSTN3 (ENSSTUG00000047243)	pex5 (ENSSTUG00000047612)	cdca3 (ENSSTUG00000047658)	gnb3a (ENSSTUG00000038645)	P3H3 (ENSSTUG00000038651)	usp5 (ENSSTUG00000038671)	CD4-2a (ENSSTUG00000038814)	CD4-1 (ENSSTUG00000038833)	cldc1 (ENSSTUG00000038854)	cops7a (ENSSTUG00000038867)	CEP85 (ENSSTUG00000038883)	wdtc1 (ENSSTUG00000038906) #22	tmem222a (ENSSTUG00000039221) #23	tpbgl (ENSSTUG00000039236)	ENSSTUG00000039242	nr0b2a (ENSSTUG00000039248)	ZNF407 (ENSSTUG00000039259)	ENSSTUG00000039271	ENSSTUG00000039276	PTGR3 (ENSSTUG00000039286)	TSHZ1 (ENSSTUG00000039293)	ZNF516 (ENSSTUG00000039297)	ENSSTUG00000039306	ZNF236 (ENSSTUG00000039315)	ENSSTUG00000039434	mbpb (ENSSTUG00000039439)	GALR1 (ENSSTUG00000039447)
Huchen	MODERN SPECIES	2547															CEP85 (ENSHHUG00000051988)	wdtc1 (ENSHHUG00000051992) #22	tmem222a (ENSHHUG00000052016) #23	tpbgl (ENSHHUG00000052022)	KDF1 (ENSHHUG00000052019)	nr0b2a (ENSHHUG00000052023)	ENSHHUG00000052025
Northern pike	MODERN SPECIES	19	lpcat3 (ENSELUG00000018748)	CLSTN3 (ENSELUG00000018862)	pex5 (ENSELUG00000018991)	cdca3 (ENSELUG00000019006)	gnb3a (ENSELUG00000019051)	P3H3 (ENSELUG00000019105)	usp5 (ENSELUG00000019584)	ENSELUG00000019629	cd4-1 (ENSELUG00000019649)	cldc1 (ENSELUG00000019676)	cldc1 (ENSELUG00000032669)	cops7a (ENSELUG00000019718)	si:ch211-154o6.3 (ENSELUG00000019787)	ENSELUG00000019827	CEP85 (ENSELUG00000019854)	wdtc1 (ENSELUG00000019912) #22	tpbgl (ENSELUG00000019857)	ENSELUG00000019929	RNF213 (ENSELUG00000020033)	nr0b2a (ENSELUG00000020058)	ZNF407 (ENSELUG00000020080)	PTGR3 (ENSELUG00000020096)	TSHZ1 (ENSELUG00000020104)	ENSELUG00000021678	ZNF236 (ENSELUG00000020211)	ENSELUG00000020125	ENSELUG00000020277	mbpb (ENSELUG00000027307)	GALR1 (ENSELUG00000020304)	SALL3 (ENSELUG00000020351)	NFATC1 (ENSELUG00000000894)
Osteoglossiformes	ANCESTRAL SPECIES	387										ENSGT01060000248945	ENSGT01000000214440.A.a.b.a.g.b.b #33	ENSGT00940000155019.a.a	ENSGT00520000055567.b	ENSGT00940000157260.t	ENSGT00620000087993.a.b	ENSGT00950000182900.B #22	ENSGT00390000007371.f #23	ENSGT00940000154868.a.b.b	ENSGT00390000016565.g	ENSGT00940000163083.n	ENSGT00940000155574.C.f
P. kingsleyae	MODERN SPECIES	1	RAD54B (ENSPKIG00000014974)	gem (ENSPKIG00000014954)	cdh17 (ENSPKIG00000014915)	pdp1 (ENSPKIG00000014905)	TMEM67 (ENSPKIG00000014869)	rbm12ba (ENSPKIG00000014851)	ENSPKIG00000014817	tex10 (ENSPKIG00000014782)	invs (ENSPKIG00000014755)	erp44 (ENSPKIG00000014706)	ENSPKIG00000014680	nr4a3 (ENSPKIG00000014642)	sec61b (ENSPKIG00000014602)	alg2 (ENSPKIG00000014585)	FRRS1L (ENSPKIG00000014554)	wdtc1 (ENSPKIG00000014467) #22	tmem222a (ENSPKIG00000014416) #23	tpbgl (ENSPKIG00000014405)	ENSPKIG00000014322	ENSPKIG00000014255	clasp2 (ENSPKIG00000014191)	ENSPKIG00000014160	ENSPKIG00000014151	ENSPKIG00000014136	ENSPKIG00000014114	ENSPKIG00000014097	ENSPKIG00000014076	ENSPKIG00000014085	ENSPKIG00000014057	zgc:113625 (ENSPKIG00000014038)	ENSPKIG00000014025
Asian bonytongue	MODERN SPECIES	9	ENSSFOG00015028428	dync1li1 (ENSSFOG00015008428)	cmtm6 (ENSSFOG00015029620)	cmtm7 (ENSSFOG00015008384)	ENSSFOG00015030748	ENSSFOG00015008362	ENSSFOG00015008289	ENSSFOG00015008346	ENSSFOG00015029676	ENSSFOG00015008251	STX12 (ENSSFOG00015008216) #33	ccn2b (ENSSFOG00015008198)	ENSSFOG00015031191	sh3bgrl3 (ENSSFOG00015030038)	CEP85 (ENSSFOG00015008107)	wdtc1 (ENSSFOG00015008071) #22	tmem222a (ENSSFOG00015008042) #23	tpbgl (ENSSFOG00015031995)	ENSSFOG00015032097	ENSSFOG00015007955	clasp2 (ENSSFOG00015007892)	zgc:113625 (ENSSFOG00015007834)	ENSSFOG00015007857	ENSSFOG00015007874	ENSSFOG00015007812	ENSSFOG00015007799	hspa12a.3 (ENSSFOG00015007774)	fam83hb (ENSSFOG00015026727)	fkbp9 (ENSSFOG00015007699)	crtap (ENSSFOG00015007647)	ENSSFOG00015007724
Spotted gar	MODERN SPECIES	672	si:ch211-195b13.1 (ENSLOCG00000004269)	eya3 (ENSLOCG00000004228)	xkr8.3 (ENSLOCG00000004211)	ENSLOCG00000004202	ENSLOCG00000004175	ENSLOCG00000004154	TMEM200B (ENSLOCG00000018280)	EPB41 (ENSLOCG00000004107)	ccn2b (ENSLOCG00000004097)	stx12 (ENSLOCG00000004069) #33	trnau1apa (ENSLOCG00000004041)	UBXN11 (ENSLOCG00000004023)	sh3bgrl3 (ENSLOCG00000004007)	CEP85 (ENSLOCG00000003980)	paqr7a (ENSLOCG00000018279)	wdtc1 (ENSLOCG00000003956) #22	tmem222a (ENSLOCG00000003943) #23	tpbga (ENSLOCG00000003925)	KDF1 (ENSLOCG00000003910)	nr0b2a (ENSLOCG00000003893)	nudc (ENSLOCG00000003879)	gpatch3 (ENSLOCG00000003858)	tbxta (ENSLOCG00000003838)	gpn2 (ENSLOCG00000003822)	ARID1A (ENSLOCG00000003798)	pigv (ENSLOCG00000003786)	ENSLOCG00000003768	tent5bb (ENSLOCG00000003743)	tcea3 (ENSLOCG00000003716)	ENSLOCG00000003703	oprd1b (ENSLOCG00000003690)
Reedfish	MODERN SPECIES	5	LSM10 (ENSECRG00000017463)	oscp1a (ENSECRG00000017499)	ENSECRG00000017548	ENSECRG00000017570	mrps15 (ENSECRG00000017586)	ENSECRG00000017616	sh3d21 (ENSECRG00000017668)	THRAP3 (ENSECRG00000017732)	ENSECRG00000017775	ENSECRG00000017791	map7d1a (ENSECRG00000017823)	ENSECRG00000017909 #25	ENSECRG00000017973	ENSECRG00000017999	ENSECRG00000018025	wdtc1 (ENSECRG00000018055) #22	tmem222a (ENSECRG00000018153) #23	tpbga (ENSECRG00000018227)	ENSECRG00000018244	nr0b2a (ENSECRG00000018264)	nudc (ENSECRG00000018283)	gpatch3 (ENSECRG00000018324)	gpn2 (ENSECRG00000018368)	tbxta (ENSECRG00000018388)	ARID1A (ENSECRG00000018433)	pigv (ENSECRG00000018504)	zdhhc18b (ENSECRG00000018524)	tent5bb (ENSECRG00000018545)	ENSECRG00000018553	rps6ka1 (ENSECRG00000018755)	cnksr1 (ENSECRG00000020115)
Elephant shark	MODERN SPECIES	1521	yrdc (ENSCMIG00000019103)	ENSCMIG00000019100	ENSCMIG00000019098	ENSCMIG00000019096	ENSCMIG00000019092	ENSCMIG00000019084	ENSCMIG00000019081	ENSCMIG00000019077	C1orf109 (ENSCMIG00000019075)	GRIK3 (ENSCMIG00000018961)	ZC3H12A (ENSCMIG00000018915)	nt5c1aa (ENSCMIG00000018912)	ENSCMIG00000018847	sytl1 (ENSCMIG00000018815) #24	slc9a1b (ENSCMIG00000018806) #21	wdtc1 (ENSCMIG00000018800) #22	ENSCMIG00000018798	ENSCMIG00000018797	nudc (ENSCMIG00000018794)	nr0b2a (ENSCMIG00000018792)	gpatch3 (ENSCMIG00000018791)	gpn2 (ENSCMIG00000018789)	zdhhc18b (ENSCMIG00000018788)	pigv (ENSCMIG00000018785)	ARID1A (ENSCMIG00000018700)	ENSCMIG00000018657	ENSCMIG00000018656	dhdds (ENSCMIG00000018655)	ENSCMIG00000018653	pdik1l (ENSCMIG00000018650)	paqr7b (ENSCMIG00000018648)
Cyclostomata	ANCESTRAL SPECIES																	ENSGT00950000182900.B #22
Hagfish	MODERN SPECIES	1445															cul5a (ENSEBUG00000002025)	wdtc1 (ENSEBUG00000011105) #22	ENSEBUG00000013839	ENSEBUG00000013487	ENSEBUG00000015299	ENSEBUG00000000307	MRPS9 (ENSEBUG00000009642)