Euteleostomi	ANCESTRAL SPECIES	834														ENSGT00940000160210 #20	ENSGT00940000158688 #21	ENSGT00940000159534 #22
Sarcopterygii	ANCESTRAL SPECIES	267		ENSGT00390000010372	ENSGT00940000162211	ENSGT00940000160828	ENSGT00940000160379	ENSGT00440000033504.C	ENSGT00940000159918.a.b	ENSGT00910000144115.a	ENSGT00940000153544.a	ENSGT00390000007975.b	ENSGT00550000074828.b	ENSGT00940000155662	ENSGT00940000168880	ENSGT00940000160210 #20	ENSGT00940000158688 #21	ENSGT00940000159534 #22
Tetrapoda	ANCESTRAL SPECIES	208							ENSGT00940000160379	ENSGT00440000033504.C	ENSGT00940000159918.a.b	ENSGT00910000144115.a	ENSGT00940000153544.a	ENSGT00390000007975.b	ENSGT00550000074828.b	ENSGT00940000160210 #20	ENSGT00940000158688 #21	ENSGT00940000159534 #22
Amniota	ANCESTRAL SPECIES	26	ENSGT00940000163908	ENSGT00390000014270	ENSGT00940000160379	ENSGT00440000033504.C	ENSGT00940000159918.a.b	ENSGT00910000144115.a	ENSGT00970000193695	ENSGT00940000169569	ENSGT00940000153544.a	ENSGT00390000007975.b	ENSGT00940000162211	ENSGT00940000160828	ENSGT00550000074828.b	ENSGT00940000160210 #20	ENSGT00940000158688 #21	ENSGT00940000159534 #22	ENSGT00940000162710 #23	ENSGT00940000161331 #24	ENSGT00390000006247 #25	ENSGT00940000158411 #26	ENSGT00940000158161 #27	ENSGT00940000158860 #28	ENSGT00940000156542 #29	ENSGT00940000160669 #31	ENSGT00400000022095.b #32	ENSGT00950000182981.b.f.b #33	ENSGT00390000015805 #34	ENSGT00940000158169 #35	ENSGT00940000160258 #37	ENSGT00940000154679	ENSGT00940000157663 #36
Mammalia	ANCESTRAL SPECIES	41	ENSGT00940000161251	ENSGT00390000000020.a	ENSGT00940000163908	ENSGT00390000014270	ENSGT00940000153189.C	ENSGT00940000156194	ENSGT00940000160379	ENSGT00940000159918.a.b	ENSGT00910000144115.a	ENSGT00940000153544.a	ENSGT00390000007975.b	ENSGT00940000162211	ENSGT00940000160828	ENSGT00940000160210 #20	ENSGT00940000158688 #21	ENSGT00940000159534 #22	ENSGT00940000162710 #23	ENSGT00940000161331 #24	ENSGT00390000006247 #25	ENSGT00940000158411 #26	ENSGT00940000158161 #27	ENSGT00940000158860 #28	ENSGT00940000156542 #29	ENSGT00940000160669 #31	ENSGT00400000022095.b #32	ENSGT00950000182981.b.f.b #33	ENSGT00390000015805 #34	ENSGT00940000158169 #35	ENSGT00940000157663 #36	ENSGT00940000160258 #37	ENSGT00940000154679
Theria	ANCESTRAL SPECIES	3	ENSGT00940000162223 #9	ENSGT00940000163644	ENSGT00940000162989.c	ENSGT00390000001017 #11	ENSGT00940000154557 #12	ENSGT00940000165936	ENSGT00940000163351 #14	ENSGT00950000182931.A #15	ENSGT00950000183117.a.b #16	ENSGT01030000234578.B.b #17	ENSGT00390000017353 #18	ENSGT00940000159669 #19	ENSGT00940000163100.b	ENSGT00940000160210 #20	ENSGT00940000158688 #21	ENSGT00940000159534 #22	ENSGT00940000162710 #23	ENSGT00940000161331 #24	ENSGT00390000006247 #25	ENSGT00940000158411 #26	ENSGT00940000158161 #27	ENSGT00940000158860 #28	ENSGT00940000156542 #29	ENSGT00940000163477 #30	ENSGT00940000160669 #31	ENSGT00400000022095.b #32	ENSGT00950000182981.b.f.b #33	ENSGT00390000015805 #34	ENSGT00940000158169 #35	ENSGT00940000157663 #36	ENSGT00940000154679
Eutheria	ANCESTRAL SPECIES		ENSGT00940000163644	ENSGT00940000162989.c	ENSGT00390000001017 #11	ENSGT00940000154557.c.a #12	ENSGT00940000165936	ENSGT00940000154557.c.b #13	ENSGT00940000163351 #14	ENSGT00950000182931.A #15	ENSGT00950000183117.a.b #16	ENSGT01030000234578.B.b #17	ENSGT00390000017353 #18	ENSGT00940000159669 #19	ENSGT00940000163100.b	ENSGT00940000160210 #20	ENSGT00940000158688 #21	ENSGT00940000159534 #22	ENSGT00940000162710 #23	ENSGT00940000161331 #24	ENSGT00390000006247 #25	ENSGT00940000158411 #26	ENSGT00940000158161 #27	ENSGT00940000158860 #28	ENSGT00940000156542 #29	ENSGT00940000163477 #30	ENSGT00940000160669 #31	ENSGT00400000022095.b #32	ENSGT00950000182981.b.f.b #33	ENSGT00390000015805 #34	ENSGT00940000158169 #35	ENSGT00940000157663 #36	ENSGT00940000154679
Boreoeutheria	ANCESTRAL SPECIES		ENSGT00940000162223 #9	ENSGT00940000163644	ENSGT00390000001017 #11	ENSGT00940000154557.c.a #12	ENSGT00940000165936	ENSGT00940000154557.c.b #13	ENSGT00940000163351 #14	ENSGT00950000182931.A #15	ENSGT00950000183117.a.b #16	ENSGT01030000234578.B.b #17	ENSGT00390000017353 #18	ENSGT00940000159669 #19	ENSGT00940000163100.b	ENSGT00940000160210 #20	ENSGT00940000158688 #21	ENSGT00940000159534 #22	ENSGT00940000162710 #23	ENSGT00940000161331 #24	ENSGT00390000006247 #25	ENSGT00940000158411 #26	ENSGT00940000158161 #27	ENSGT00940000158860 #28	ENSGT00940000156542 #29	ENSGT00940000163477 #30	ENSGT00940000160669 #31	ENSGT00400000022095.b #32	ENSGT00950000182981.b.f.b #33	ENSGT00390000015805 #34	ENSGT00940000158169 #35	ENSGT00940000157663 #36	ENSGT00940000155416.a.b
Euarchontoglires	ANCESTRAL SPECIES		ENSGT00940000162223 #9	ENSGT00940000163644	ENSGT00390000001017 #11	ENSGT00940000154557.c.a #12	ENSGT00940000154557.c.b #13	ENSGT00940000165936	ENSGT00940000163351 #14	ENSGT00950000182931.A #15	ENSGT00950000183117.a.b #16	ENSGT01030000234578.B.b #17	ENSGT00390000017353 #18	ENSGT00940000159669 #19	ENSGT00940000163100.b	ENSGT00940000160210 #20	ENSGT00940000158688 #21	ENSGT00940000159534 #22	ENSGT00940000162710 #23	ENSGT00940000161331 #24	ENSGT00390000006247 #25	ENSGT00940000158411 #26	ENSGT00940000158161 #27	ENSGT00940000158860 #28	ENSGT00940000156542 #29	ENSGT00940000163477 #30	ENSGT00940000160669 #31	ENSGT00400000022095.b #32	ENSGT00950000182981.b.f.b #33	ENSGT00390000015805 #34	ENSGT00940000158169 #35	ENSGT00940000157663 #36	ENSGT00940000155416.a.a
Primates	ANCESTRAL SPECIES	4	ENSGT00390000001958 #7	ENSGT00390000010711 #8	ENSGT00940000162223 #9	ENSGT00940000163644	ENSGT00390000001017 #11	ENSGT00940000154557.c.a #12	ENSGT00940000163351 #14	ENSGT00950000182931.A #15	ENSGT00950000183117.a.b #16	ENSGT01030000234578.B.b #17	ENSGT00390000017353 #18	ENSGT00940000159669 #19	ENSGT00940000163100.b	ENSGT00940000160210 #20	ENSGT00940000158688 #21	ENSGT00940000159534 #22	ENSGT00940000162710 #23	ENSGT00940000161331 #24	ENSGT00390000006247 #25	ENSGT00940000158411 #26	ENSGT00940000158161 #27	ENSGT00940000158860 #28	ENSGT00940000156542 #29	ENSGT00940000163477 #30	ENSGT00940000160669 #31	ENSGT00400000022095.b #32	ENSGT00950000182981.b.f.b #33	ENSGT00390000015805 #34	ENSGT00940000158169 #35	ENSGT00940000157663 #36	ENSGT00940000155416.a.a
Haplorrhini	ANCESTRAL SPECIES	1	ENSGT00390000010711 #8	ENSGT00940000162223 #9	ENSGT00940000163644	ENSGT00390000001017 #11	ENSGT00940000154557.c.a #12	ENSGT00940000154557.c.b #13	ENSGT00940000163351 #14	ENSGT00950000182931.A #15	ENSGT00950000183117.a.b #16	ENSGT01030000234578.B.b #17	ENSGT00390000017353 #18	ENSGT00940000159669 #19	ENSGT00940000163100.b	ENSGT00940000160210 #20	ENSGT00940000158688 #21	ENSGT00940000159534 #22	ENSGT00940000162710 #23	ENSGT00940000161331 #24	ENSGT00390000006247 #25	ENSGT00940000158411 #26	ENSGT00940000158161 #27	ENSGT00940000158860 #28	ENSGT00940000156542 #29	ENSGT00940000163477 #30	ENSGT00940000160669 #31	ENSGT00400000022095.b #32	ENSGT00950000182981.b.f.b #33	ENSGT00390000015805 #34	ENSGT00940000158169 #35	ENSGT00940000157663 #36	ENSGT00940000155416.a.a
Simiiformes	ANCESTRAL SPECIES	3	ENSGT00390000010711 #8	ENSGT00940000162223 #9	ENSGT00940000163644	ENSGT00390000001017 #11	ENSGT00940000154557.c.a #12	ENSGT00940000154557.c.b #13	ENSGT00940000163351 #14	ENSGT00950000182931.A #15	ENSGT00950000183117.a.b #16	ENSGT01030000234578.B.b #17	ENSGT00390000017353 #18	ENSGT00940000159669 #19	ENSGT00940000163100.b	ENSGT00940000160210 #20	ENSGT00940000158688 #21	ENSGT00940000159534 #22	ENSGT00940000162710 #23	ENSGT00940000161331 #24	ENSGT00390000006247 #25	ENSGT00940000158411 #26	ENSGT00940000158161 #27	ENSGT00940000158860 #28	ENSGT00940000156542 #29	ENSGT00940000163477 #30	ENSGT00940000160669 #31	ENSGT00400000022095.b #32	ENSGT00950000182981.b.f.b #33	ENSGT00390000015805 #34	ENSGT00940000158169 #35	ENSGT00940000157663 #36	ENSGT00940000155416.a.a
Platyrrhini	ANCESTRAL SPECIES		ENSGT00390000015005	ENSGT00390000001958.t.a #7	ENSGT00390000010711 #8	ENSGT00940000162223 #9	ENSGT00390000001017 #11	ENSGT00940000154557.c.a #12	ENSGT00940000154557.c.b #13	ENSGT00940000163351 #14	ENSGT00950000182931.A #15	ENSGT00950000183117.a.b #16	ENSGT01030000234578.B.b #17	ENSGT00390000017353 #18	ENSGT00940000159669 #19	ENSGT00940000160210 #20	ENSGT00940000158688 #21	ENSGT00940000159534 #22	ENSGT00940000162710 #23	ENSGT00940000161331 #24	ENSGT00390000006247 #25	ENSGT00940000158411 #26	ENSGT00940000158161 #27	ENSGT00940000158860 #28	ENSGT00940000156542 #29	ENSGT00940000163477 #30	ENSGT00940000160669 #31	ENSGT00400000022095.b #32	ENSGT00950000182981.b.f.b #33	ENSGT00390000015805 #34	ENSGT00940000158169 #35	ENSGT00940000157663.i.a #36	ENSGT00940000155416.a.a.e.a
Cebidae	ANCESTRAL SPECIES	1	ENSGT00390000015005	ENSGT00390000001958.t.a #7	ENSGT00390000010711 #8	ENSGT00940000162223 #9	ENSGT00390000001017 #11	ENSGT00940000154557.c.a #12	ENSGT00940000154557.c.b #13	ENSGT00940000163351 #14	ENSGT00950000182931.A #15	ENSGT00950000183117.a.b #16	ENSGT01030000234578.B.b #17	ENSGT00390000017353 #18	ENSGT00940000159669 #19	ENSGT00940000160210 #20	ENSGT00940000158688 #21	ENSGT00940000159534 #22	ENSGT00940000162710 #23	ENSGT00940000161331 #24	ENSGT00390000006247 #25	ENSGT00940000158411 #26	ENSGT00940000158161 #27	ENSGT00940000158860 #28	ENSGT00940000156542 #29	ENSGT00940000163477 #30	ENSGT00940000160669 #31	ENSGT00400000022095.b #32	ENSGT00950000182981.b.f.b #33	ENSGT00390000015805 #34	ENSGT00940000158169 #35	ENSGT00940000157663.i.a #36	ENSGT00940000155416.a.a.e.a
Cebidae_a	ANCESTRAL SPECIES	41	ENSGT00390000015005	ENSGT00390000001958.t.a #7	ENSGT00390000010711 #8	ENSGT00940000162223 #9	ENSGT00390000001017 #11	ENSGT00940000154557.c.a #12	ENSGT00940000154557.c.b #13	ENSGT00940000163351 #14	ENSGT00950000182931.A #15	ENSGT00950000183117.a.b #16	ENSGT01030000234578.B.b #17	ENSGT00390000017353 #18	ENSGT00940000159669 #19	ENSGT00940000160210 #20	ENSGT00940000158688 #21	ENSGT00940000159534 #22	ENSGT00940000162710 #23	ENSGT00940000161331 #24	ENSGT00390000006247 #25	ENSGT00940000158411 #26	ENSGT00940000158161 #27	ENSGT00940000158860 #28	ENSGT00940000156542 #29	ENSGT00940000163477 #30	ENSGT00940000160669 #31	ENSGT00400000022095.b #32	ENSGT00950000182981.b.f.b #33	ENSGT00390000015805 #34	ENSGT00940000158169 #35	ENSGT00940000157663.i.a #36	ENSGT00940000155416.a.a.e.a
Capuchin	MODERN SPECIES	256	ATP5PB (ENSCCAG00000035253) #7	WDR77 (ENSCCAG00000033406) #8	OVGP1 (ENSCCAG00000034065) #9	ENSCCAG00000032539 #10	PIFO (ENSCCAG00000032307) #11	CHIA (ENSCCAG00000020542) #12	ENSCCAG00000024744 #13	CHI3L2 (ENSCCAG00000030977) #14	DENND2D (ENSCCAG00000028146) #15	CEPT1 (ENSCCAG00000036974) #16	DRAM2 (ENSCCAG00000024404) #17	LRIF1 (ENSCCAG00000010544) #18	CD53 (ENSCCAG00000023711) #19	KCNA3 (ENSCCAG00000010884) #20	KCNA2 (ENSCCAG00000030589) #21	KCNA10 (ENSCCAG00000002271) #22	ENSCCAG00000023057 #23	PROK1 (ENSCCAG00000031307) #24	LAMTOR5 (ENSCCAG00000036503) #25	SLC16A4 (ENSCCAG00000021749) #26	RBM15 (ENSCCAG00000036780) #27	KCNC4 (ENSCCAG00000031821) #28	SLC6A17 (ENSCCAG00000033403) #29	UBL4B (ENSCCAG00000035706) #30	ALX3 (ENSCCAG00000030144) #31	STRIP1 (ENSCCAG00000036694) #32	AHCYL1 (ENSCCAG00000032736) #33	CSF1 (ENSCCAG00000028106) #34	EPS8L3 (ENSCCAG00000031510) #35	ENSCCAG00000030116 #36	GSTM1 (ENSCCAG00000034006) #37
Bolivian squirrel monkey	MODERN SPECIES	98	TMIGD3 (ENSSBOG00000031608)	C1orf162 (ENSSBOG00000035875)	ATP5PB (ENSSBOG00000018275) #7	ENSSBOG00000022640 #8	PIFO (ENSSBOG00000035544) #11	ENSSBOG00000034771	CHIA (ENSSBOG00000031858) #12	ENSSBOG00000035934 #13	CHI3L2 (ENSSBOG00000031446) #14	DENND2D (ENSSBOG00000002690) #15	CEPT1 (ENSSBOG00000035378) #16	DRAM2 (ENSSBOG00000026655) #17	LRIF1 (ENSSBOG00000034241) #18	CD53 (ENSSBOG00000029310) #19	KCNA2 (ENSSBOG00000023407) #21	KCNA10 (ENSSBOG00000019327) #22	ENSSBOG00000033622 #23	PROK1 (ENSSBOG00000029096) #24	LAMTOR5 (ENSSBOG00000035756) #25	SLC16A4 (ENSSBOG00000027853) #26	RBM15 (ENSSBOG00000021394) #27	KCNC4 (ENSSBOG00000026296) #28	SLC6A17 (ENSSBOG00000024218) #29	UBL4B (ENSSBOG00000019468) #30	ALX3 (ENSSBOG00000031389) #31	STRIP1 (ENSSBOG00000034282) #32	AHCYL1 (ENSSBOG00000036024) #33	CSF1 (ENSSBOG00000030606) #34	EPS8L3 (ENSSBOG00000020123) #35	GSTM3 (ENSSBOG00000022445) #36	GSTM5 (ENSSBOG00000030910)
Mas night monkey	MODERN SPECIES	584	ATP5PB (ENSANAG00000029496) #7	WDR77 (ENSANAG00000025377) #8	OVGP1 (ENSANAG00000028815) #9	PIFO (ENSANAG00000036074) #11	CHIA (ENSANAG00000023184) #12	ENSANAG00000021056 #13	CHI3L2 (ENSANAG00000020426) #14	DENND2D (ENSANAG00000037260) #15	CEPT1 (ENSANAG00000037752) #16	DRAM2 (ENSANAG00000037008) #17	LRIF1 (ENSANAG00000023749) #18	CD53 (ENSANAG00000033596) #19	ENSANAG00000036035	KCNA3 (ENSANAG00000019839) #20	KCNA2 (ENSANAG00000021269) #21	KCNA10 (ENSANAG00000017569) #22	ENSANAG00000027156 #23	PROK1 (ENSANAG00000028317) #24	LAMTOR5 (ENSANAG00000037435) #25	SLC16A4 (ENSANAG00000027838) #26	RBM15 (ENSANAG00000020673) #27	ENSANAG00000034638 #28	SLC6A17 (ENSANAG00000029240) #29	UBL4B (ENSANAG00000007647) #30	ALX3 (ENSANAG00000032526) #31	STRIP1 (ENSANAG00000023879) #32	AHCYL1 (ENSANAG00000031825) #33	CSF1 (ENSANAG00000000909) #34	EPS8L3 (ENSANAG00000028233) #35	ENSANAG00000023172 #36	ENSANAG00000037980
Catarrhini	ANCESTRAL SPECIES	3	ENSGT00390000010711 #8	ENSGT00940000162223 #9	ENSGT00940000163644	ENSGT00390000001017 #11	ENSGT00940000154557.c.a #12	ENSGT00940000154557.c.b #13	ENSGT00940000163351 #14	ENSGT00950000182931.A #15	ENSGT00950000183117.a.b #16	ENSGT01030000234578.B.b #17	ENSGT00390000017353 #18	ENSGT00940000159669 #19	ENSGT00940000163100.b	ENSGT00940000160210 #20	ENSGT00940000158688 #21	ENSGT00940000159534 #22	ENSGT00940000162710 #23	ENSGT00940000161331 #24	ENSGT00390000006247 #25	ENSGT00940000158411 #26	ENSGT00940000158161 #27	ENSGT00910000146847.b	ENSGT00940000158860 #28	ENSGT00940000156542 #29	ENSGT00940000163477 #30	ENSGT00940000160669 #31	ENSGT00400000022095.b #32	ENSGT00950000182981.b.f.b #33	ENSGT00390000015805 #34	ENSGT00940000158169 #35	ENSGT00940000157663 #36
Hominoidea	ANCESTRAL SPECIES	3	ENSGT00390000001958.t.a #7	ENSGT00390000010711 #8	ENSGT00940000162223 #9	ENSGT00390000001017 #11	ENSGT00940000154557.c.a #12	ENSGT00940000154557.c.b #13	ENSGT00940000163351 #14	ENSGT00950000182931.A #15	ENSGT00950000183117.a.b #16	ENSGT01030000234578.B.b #17	ENSGT00390000017353 #18	ENSGT00940000159669 #19	ENSGT00940000163100.b	ENSGT00940000160210 #20	ENSGT00940000158688 #21	ENSGT00940000159534 #22	ENSGT00940000162710 #23	ENSGT00940000161331 #24	ENSGT00390000006247 #25	ENSGT00940000158411 #26	ENSGT00940000158161 #27	ENSGT00910000146847.b.b	ENSGT00940000158860 #28	ENSGT00940000156542 #29	ENSGT00940000163477 #30	ENSGT00940000160669 #31	ENSGT00400000022095.b #32	ENSGT00950000182981.b.f.b #33	ENSGT00390000015805 #34	ENSGT00940000158169 #35	ENSGT00940000157663 #36
Hominidae	ANCESTRAL SPECIES	3	ENSGT00390000015005	ENSGT00390000001958.t.a #7	ENSGT00390000010711 #8	ENSGT00940000162223 #9	ENSGT00390000001017 #11	ENSGT00940000154557.c.a #12	ENSGT00940000154557.c.b #13	ENSGT00940000163351 #14	ENSGT00950000182931.A #15	ENSGT00950000183117.a.b #16	ENSGT01030000234578.B.b #17	ENSGT00390000017353 #18	ENSGT00940000159669 #19	ENSGT00940000160210 #20	ENSGT00940000158688 #21	ENSGT00940000159534 #22	ENSGT00940000162710 #23	ENSGT00940000161331 #24	ENSGT00390000006247 #25	ENSGT00940000158411 #26	ENSGT00940000158161 #27	ENSGT00390000008532	ENSGT00910000146847.b.b	ENSGT00940000158860 #28	ENSGT00940000156542 #29	ENSGT00940000163477 #30	ENSGT00940000160669 #31	ENSGT00400000022095.b #32	ENSGT00950000182981.b.f.b #33	ENSGT00390000015805 #34	ENSGT00940000158169 #35
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	3	ENSGT00390000015005	ENSGT00390000001958.t.a #7	ENSGT00390000010711 #8	ENSGT00940000162223 #9	ENSGT00390000001017 #11	ENSGT00940000154557.c.a #12	ENSGT00940000154557.c.b #13	ENSGT00940000163351 #14	ENSGT00950000182931.A #15	ENSGT00950000183117.a.b #16	ENSGT01030000234578.B.b #17	ENSGT00390000017353 #18	ENSGT00940000159669 #19	ENSGT00940000160210 #20	ENSGT00940000158688 #21	ENSGT00940000159534 #22	ENSGT00940000162710 #23	ENSGT00940000161331 #24	ENSGT00390000006247 #25	ENSGT00940000158411 #26	ENSGT00940000158161 #27	ENSGT00390000008532	ENSGT00910000146847.b.b	ENSGT00940000158860 #28	ENSGT00940000156542 #29	ENSGT00940000163477 #30	ENSGT00940000160669 #31	ENSGT00400000022095.b #32	ENSGT00950000182981.b.f.b #33	ENSGT00390000015805 #34	ENSGT00940000158169 #35
Homo/Pan group	ANCESTRAL SPECIES	4	ENSGT00390000015005	ENSGT00390000001958.t.a #7	ENSGT00390000010711 #8	ENSGT00940000162223 #9	ENSGT00390000001017 #11	ENSGT00940000154557.c.a #12	ENSGT00940000154557.c.b #13	ENSGT00940000163351 #14	ENSGT00950000182931.A #15	ENSGT00950000183117.a.b #16	ENSGT01030000234578.B.b #17	ENSGT00390000017353 #18	ENSGT00940000159669 #19	ENSGT00940000160210 #20	ENSGT00940000158688 #21	ENSGT00940000159534 #22	ENSGT00940000162710 #23	ENSGT00940000161331 #24	ENSGT00390000006247 #25	ENSGT00940000158411 #26	ENSGT00940000158161 #27	ENSGT00390000008532	ENSGT00910000146847.b.b	ENSGT00940000158860 #28	ENSGT00940000156542 #29	ENSGT00940000163477 #30	ENSGT00940000160669 #31	ENSGT00400000022095.b #32	ENSGT00950000182981.b.f.b #33	ENSGT00390000015805 #34	ENSGT00940000158169 #35
Pan	ANCESTRAL SPECIES		ENSGT00390000015005	ENSGT00390000001958.t.a #7	ENSGT00390000010711 #8	ENSGT00940000162223 #9	ENSGT00390000001017 #11	ENSGT00940000154557.c.a #12	ENSGT00940000154557.c.b #13	ENSGT00940000163351 #14	ENSGT00950000182931.A #15	ENSGT00950000183117.a.b #16	ENSGT01030000234578.B.b #17	ENSGT00390000017353 #18	ENSGT00940000159669 #19	ENSGT00940000160210 #20	ENSGT00940000158688 #21	ENSGT00940000159534 #22	ENSGT00940000162710 #23	ENSGT00940000161331 #24	ENSGT00390000006247 #25	ENSGT00940000158411 #26	ENSGT00940000158161 #27	ENSGT00390000008532	ENSGT00910000146847.b.b	ENSGT00940000158860 #28	ENSGT00940000156542 #29	ENSGT00940000163477 #30	ENSGT00940000160669 #31	ENSGT00400000022095.b #32	ENSGT00950000182981.b.f.b #33	ENSGT00390000015805 #34	ENSGT00940000158169 #35
Chimpanzee	MODERN SPECIES		C1H1orf162 (ENSPTRG00000001100)	ATP5PB (ENSPTRG00000001099) #7	WDR77 (ENSPTRG00000001098) #8	OVGP1 (ENSPTRG00000001097) #9	PIFO (ENSPTRG00000001095) #11	CHIA (ENSPTRG00000049663) #12	ENSPTRG00000045154 #13	CHI3L2 (ENSPTRG00000001092) #14	DENND2D (ENSPTRG00000001090) #15	CEPT1 (ENSPTRG00000001089) #16	DRAM2 (ENSPTRG00000001087) #17	LRIF1 (ENSPTRG00000001086) #18	CD53 (ENSPTRG00000001085) #19	KCNA3 (ENSPTRG00000001084) #20	ENSPTRG00000051151 #21	KCNA10 (ENSPTRG00000001082) #22	CYMP (ENSPTRG00000045937) #23	PROK1 (ENSPTRG00000001080) #24	LAMTOR5 (ENSPTRG00000001078) #25	SLC16A4 (ENSPTRG00000023772) #26	RBM15 (ENSPTRG00000001074) #27	ENSPTRG00000049917	ENSPTRG00000046899	ENSPTRG00000045332	KCNC4 (ENSPTRG00000001073) #28	SLC6A17 (ENSPTRG00000023683) #29	UBL4B (ENSPTRG00000030434) #30	ALX3 (ENSPTRG00000001070) #31	STRIP1 (ENSPTRG00000001069) #32	AHCYL1 (ENSPTRG00000001067) #33	CSF1 (ENSPTRG00000001066) #34
Bonobo	MODERN SPECIES		TMIGD3 (ENSPPAG00000035113)	C1orf162 (ENSPPAG00000037238)	ENSPPAG00000040192 #7	WDR77 (ENSPPAG00000038773) #8	OVGP1 (ENSPPAG00000025014) #9	PIFO (ENSPPAG00000005642) #11	CHIA (ENSPPAG00000022214) #12	ENSPPAG00000034524 #13	CHI3L2 (ENSPPAG00000038288) #14	DENND2D (ENSPPAG00000037282) #15	CEPT1 (ENSPPAG00000043162) #16	DRAM2 (ENSPPAG00000033552) #17	LRIF1 (ENSPPAG00000039930) #18	CD53 (ENSPPAG00000038281) #19	KCNA2 (ENSPPAG00000018153) #21	KCNA10 (ENSPPAG00000003310) #22	ENSPPAG00000028583 #23	PROK1 (ENSPPAG00000040244) #24	ENSPPAG00000043175 #25	SLC16A4 (ENSPPAG00000035725) #26	RBM15 (ENSPPAG00000041967) #27	ENSPPAG00000015163	ENSPPAG00000021403	ENSPPAG00000031411 #28	SLC6A17 (ENSPPAG00000042325) #29	UBL4B (ENSPPAG00000025188) #30	ALX3 (ENSPPAG00000042465) #31	STRIP1 (ENSPPAG00000031474) #32	ENSPPAG00000027525 #33	CSF1 (ENSPPAG00000042763) #34	GSTM3 (ENSPPAG00000027162) #36
Human	MODERN SPECIES		TMIGD3 (ENSG00000121933)	C1orf162 (ENSG00000143110)	ATP5PB (ENSG00000116459) #7	WDR77 (ENSG00000116455) #8	OVGP1 (ENSG00000085465) #9	PIFO (ENSG00000173947) #11	CHIA (ENSG00000134216) #12	CHI3L2 (ENSG00000064886) #14	DENND2D (ENSG00000162777) #15	CEPT1 (ENSG00000134255) #16	DRAM2 (ENSG00000156171) #17	LRIF1 (ENSG00000121931) #18	CD53 (ENSG00000143119) #19	KCNA3 (ENSG00000177272) #20	KCNA2 (ENSG00000177301) #21	KCNA10 (ENSG00000143105) #22	PROK1 (ENSG00000143125) #24	LAMTOR5 (ENSG00000134248) #25	SLC16A4 (ENSG00000168679) #26	RBM15 (ENSG00000162775) #27	KCNC4 (ENSG00000116396) #28	SLC6A17 (ENSG00000197106) #29	UBL4B (ENSG00000186150) #30	ALX3 (ENSG00000156150) #31	STRIP1 (ENSG00000143093) #32	AHCYL1 (ENSG00000168710) #33	CSF1 (ENSG00000184371) #34	EPS8L3 (ENSG00000198758) #35	GSTM3 (ENSG00000134202) #36	GSTM5 (ENSG00000134201)	GSTM1 (ENSG00000134184) #37
Gorilla	MODERN SPECIES		ATP5PB (ENSGGOG00000005215) #7	WDR77 (ENSGGOG00000005208) #8	OVGP1 (ENSGGOG00000005204) #9	PIFO (ENSGGOG00000008535) #11	CHIA (ENSGGOG00000008523) #12	ENSGGOG00000039604 #13	ENSGGOG00000039363 #14	ENSGGOG00000016018 #14	DENND2D (ENSGGOG00000001542) #15	CEPT1 (ENSGGOG00000009575) #16	DRAM2 (ENSGGOG00000009572) #17	LRIF1 (ENSGGOG00000007251) #18	CD53 (ENSGGOG00000005468) #19	KCNA3 (ENSGGOG00000000667) #20	ENSGGOG00000011711 #21	KCNA10 (ENSGGOG00000008416) #22	ENSGGOG00000021928 #23	PROK1 (ENSGGOG00000008418) #24	ENSGGOG00000016522 #25	SLC16A4 (ENSGGOG00000016418) #26	RBM15 (ENSGGOG00000003655) #27	KCNC4 (ENSGGOG00000013142) #28	SLC6A17 (ENSGGOG00000013131) #29	UBL4B (ENSGGOG00000039320) #30	ALX3 (ENSGGOG00000004064) #31	STRIP1 (ENSGGOG00000004057) #32	AHCYL1 (ENSGGOG00000011791) #33	CSF1 (ENSGGOG00000016212) #34	EPS8L3 (ENSGGOG00000004962) #35	GSTM3 (ENSGGOG00000010280) #36	GSTM5 (ENSGGOG00000036563)
Orangutan	MODERN SPECIES		C1orf162 (ENSPPYG00000001031)	WDR77 (ENSPPYG00000001033) #8	OVGP1 (ENSPPYG00000001034) #9	ENSPPYG00000037725	ENSPPYG00000001035 #11	CHIA (ENSPPYG00000001036) #12	ENSPPYG00000001037 #13	CHI3L2 (ENSPPYG00000001038) #14	DENND2D (ENSPPYG00000001039) #15	CEPT1 (ENSPPYG00000001040) #16	DRAM2 (ENSPPYG00000001041) #17	LRIF1 (ENSPPYG00000001042) #18	CD53 (ENSPPYG00000001043) #19	KCNA3 (ENSPPYG00000001045) #20	ENSPPYG00000001046 #21	KCNA10 (ENSPPYG00000001047) #22	PROK1 (ENSPPYG00000001048) #24	ENSPPYG00000001049 #25	SLC16A4 (ENSPPYG00000001050) #26	RBM15 (ENSPPYG00000001051) #27	ENSPPYG00000001052	ENSPPYG00000035653	KCNC4 (ENSPPYG00000001053) #28	SLC6A17 (ENSPPYG00000001054) #29	UBL4B (ENSPPYG00000010636) #30	ALX3 (ENSPPYG00000001055) #31	STRIP1 (ENSPPYG00000001057) #32	ENSPPYG00000001058 #33	CSF1 (ENSPPYG00000001059) #34	EPS8L3 (ENSPPYG00000001060) #35	GSTM3 (ENSPPYG00000001061) #36
Gibbon	MODERN SPECIES	2	WDR77 (ENSNLEG00000003918) #8	OVGP1 (ENSNLEG00000003907) #9	ENSNLEG00000033638	PIFO (ENSNLEG00000003881) #11	CHIA (ENSNLEG00000003831) #12	ENSNLEG00000030395 #13	CHI3L2 (ENSNLEG00000003769) #14	DENND2D (ENSNLEG00000003758) #15	CEPT1 (ENSNLEG00000003741) #16	DRAM2 (ENSNLEG00000003697) #17	LRIF1 (ENSNLEG00000003685) #18	CD53 (ENSNLEG00000003649) #19	ENSNLEG00000027477	KCNA3 (ENSNLEG00000018227) #20	ENSNLEG00000003647 #21	KCNA10 (ENSNLEG00000018226) #22	ENSNLEG00000035536 #23	PROK1 (ENSNLEG00000003636) #24	ENSNLEG00000003623 #25	SLC16A4 (ENSNLEG00000035516) #26	RBM15 (ENSNLEG00000003601) #27	ENSNLEG00000030730	KCNC4 (ENSNLEG00000003586) #28	SLC6A17 (ENSNLEG00000003562) #29	ALX3 (ENSNLEG00000003549) #31	STRIP1 (ENSNLEG00000003506) #32	AHCYL1 (ENSNLEG00000003480) #33	CSF1 (ENSNLEG00000003428) #34	EPS8L3 (ENSNLEG00000003350) #35	GSTM3 (ENSNLEG00000032361) #36	ENSNLEG00000028209 #37
Cercopithecidae	ANCESTRAL SPECIES	2	ENSGT00390000010711 #8	ENSGT00940000162223 #9	ENSGT00940000163644	ENSGT00390000001017 #11	ENSGT00940000154557.c.a #12	ENSGT00940000154557.c.b #13	ENSGT00940000163351 #14	ENSGT00950000182931.A #15	ENSGT00950000183117.a.b #16	ENSGT01030000234578.B.b #17	ENSGT00390000017353 #18	ENSGT00940000159669 #19	ENSGT00940000160210 #20	ENSGT00940000158688 #21	ENSGT00910000147898	ENSGT00940000159534 #22	ENSGT00940000161331 #24	ENSGT00390000006247 #25	ENSGT00940000158411 #26	ENSGT00940000158161 #27	ENSGT00910000146847.b	ENSGT00940000158860 #28	ENSGT00940000156542 #29	ENSGT00940000163477 #30	ENSGT00940000160669 #31	ENSGT00400000022095.b #32	ENSGT00950000182981.b.f.b #33	ENSGT00390000015805 #34	ENSGT00940000158169 #35	ENSGT00940000157663 #36	ENSGT00940000155416.a.a.c.b.b
Cercopithecinae	ANCESTRAL SPECIES		ENSGT00390000001958.t.a #7	ENSGT00390000010711 #8	ENSGT00940000162223 #9	ENSGT00390000001017 #11	ENSGT00940000154557.c.a #12	ENSGT00940000154557.c.b #13	ENSGT00940000163351 #14	ENSGT00950000182931.A #15	ENSGT00950000183117.a.b #16	ENSGT01030000234578.B.b #17	ENSGT00390000017353 #18	ENSGT00940000159669 #19	ENSGT00940000160210 #20	ENSGT00940000158688 #21	ENSGT00910000147898	ENSGT00940000159534 #22	ENSGT00940000161331 #24	ENSGT00390000006247 #25	ENSGT00940000158411 #26	ENSGT00940000158161 #27	ENSGT00910000146847.b	ENSGT00940000158860 #28	ENSGT00940000156542 #29	ENSGT00940000163477 #30	ENSGT00940000160669 #31	ENSGT00400000022095.b #32	ENSGT00950000182981.b.f.b #33	ENSGT00390000015805 #34	ENSGT00940000158169 #35	ENSGT00940000157663 #36	ENSGT00940000155416.a.b.f
Cercopithecinae_a	ANCESTRAL SPECIES		ENSGT00390000001958.t.a #7	ENSGT00390000010711 #8	ENSGT00940000162223 #9	ENSGT00390000001017 #11	ENSGT00940000154557.c.a #12	ENSGT00940000154557.c.b #13	ENSGT00940000163351 #14	ENSGT00950000182931.A #15	ENSGT00950000183117.a.b #16	ENSGT01030000234578.B.b #17	ENSGT00390000017353 #18	ENSGT00940000159669 #19	ENSGT00940000160210 #20	ENSGT00940000158688 #21	ENSGT00910000147898	ENSGT00940000159534 #22	ENSGT00940000161331 #24	ENSGT00390000006247 #25	ENSGT00940000158411 #26	ENSGT00940000158161 #27	ENSGT00910000146847.b	ENSGT00940000158860 #28	ENSGT00940000156542 #29	ENSGT00940000163477 #30	ENSGT00940000160669 #31	ENSGT00400000022095.b #32	ENSGT00950000182981.b.f.b #33	ENSGT00390000015805 #34	ENSGT00940000158169 #35	ENSGT00940000157663 #36	ENSGT00940000155416.a.b.f
Cercopithecinae_b	ANCESTRAL SPECIES	1	ENSGT00390000001958.t.a.e #7	ENSGT00390000010711 #8	ENSGT00940000162223 #9	ENSGT00390000001017 #11	ENSGT00940000154557.c.a #12	ENSGT00940000154557.c.b #13	ENSGT00940000163351 #14	ENSGT00950000182931.A #15	ENSGT00950000183117.a.b #16	ENSGT01030000234578.B.b #17	ENSGT00390000017353 #18	ENSGT00940000159669 #19	ENSGT00940000160210 #20	ENSGT00940000158688 #21	ENSGT00910000147898	ENSGT00940000159534 #22	ENSGT00940000161331 #24	ENSGT00390000006247 #25	ENSGT00940000158411 #26	ENSGT00940000158161 #27	ENSGT00910000146847.b	ENSGT00940000158860 #28	ENSGT00940000156542 #29	ENSGT00940000163477 #30	ENSGT00940000160669 #31	ENSGT00400000022095.b #32	ENSGT00950000182981.b.f.b #33	ENSGT00390000015805 #34	ENSGT00940000158169 #35	ENSGT00940000157663 #36	ENSGT00940000155416.a.b.f
Olive baboon	MODERN SPECIES		TMIGD3 (ENSPANG00000013353)	C1orf162 (ENSPANG00000044615)	ATP5PB (ENSPANG00000004607) #7	WDR77 (ENSPANG00000012473) #8	OVGP1 (ENSPANG00000016078) #9	PIFO (ENSPANG00000008849) #11	CHIA (ENSPANG00000015724) #12	ENSPANG00000011949 #13	CHI3L2 (ENSPANG00000004608) #14	DENND2D (ENSPANG00000013354) #15	CEPT1 (ENSPANG00000000567) #16	LRIF1 (ENSPANG00000006342) #18	CD53 (ENSPANG00000008182) #19	KCNA3 (ENSPANG00000002235) #20	KCNA2 (ENSPANG00000007311) #21	KCNA10 (ENSPANG00000011950) #22	PROK1 (ENSPANG00000048956) #24	LAMTOR5 (ENSPANG00000017986) #25	SLC16A4 (ENSPANG00000005664) #26	ENSPANG00000049898	RBM15 (ENSPANG00000020891) #27	ENSPANG00000037668	KCNC4 (ENSPANG00000013356) #28	ENSPANG00000043464	SLC6A17 (ENSPANG00000015879) #29	UBL4B (ENSPANG00000051027) #30	ALX3 (ENSPANG00000005530) #31	STRIP1 (ENSPANG00000005602) #32	AHCYL1 (ENSPANG00000007597) #33	CSF1 (ENSPANG00000007193) #34	EPS8L3 (ENSPANG00000009173) #35
Cercopithecinae_d	ANCESTRAL SPECIES	49	ENSGT00390000001958.t.a.e #7	ENSGT00390000010711 #8	ENSGT00940000162223 #9	ENSGT00390000001017 #11	ENSGT00940000154557.c.a #12	ENSGT00940000154557.c.b #13	ENSGT00940000163351 #14	ENSGT00950000182931.A #15	ENSGT00950000183117.a.b #16	ENSGT01030000234578.B.b #17	ENSGT00390000017353 #18	ENSGT00940000159669 #19	ENSGT00940000160210 #20	ENSGT00940000158688 #21	ENSGT00910000147898	ENSGT00940000159534 #22	ENSGT00940000161331 #24	ENSGT00390000006247 #25	ENSGT00940000158411 #26	ENSGT00940000158161 #27	ENSGT00940000158860 #28	ENSGT00940000156542 #29	ENSGT00940000160669 #31	ENSGT00400000022095.b #32	ENSGT00950000182981.b.f.b #33	ENSGT00390000015805 #34	ENSGT00940000158169 #35	ENSGT00940000157663 #36	ENSGT00940000155416.a.a.c.b.a.b	ENSGT00940000155416.a.b.f	ENSGT00950000183011.d
Sooty mangabey	MODERN SPECIES	223	ENSCATG00000032422 #7	WDR77 (ENSCATG00000038006) #8	OVGP1 (ENSCATG00000037898) #9	PIFO (ENSCATG00000010659) #11	CHIA (ENSCATG00000018206) #12	ENSCATG00000041233 #13	CHI3L2 (ENSCATG00000042029) #14	DENND2D (ENSCATG00000030955) #15	CEPT1 (ENSCATG00000033753) #16	DRAM2 (ENSCATG00000038043) #17	LRIF1 (ENSCATG00000033227) #18	CD53 (ENSCATG00000030901) #19	KCNA3 (ENSCATG00000022061) #20	KCNA2 (ENSCATG00000034501) #21	ENSCATG00000039307	KCNA10 (ENSCATG00000017317) #22	PROK1 (ENSCATG00000040695) #24	LAMTOR5 (ENSCATG00000036227) #25	SLC16A4 (ENSCATG00000030942) #26	RBM15 (ENSCATG00000015743) #27	KCNC4 (ENSCATG00000034642) #28	SLC6A17 (ENSCATG00000044184) #29	ALX3 (ENSCATG00000037651) #31	STRIP1 (ENSCATG00000033191) #32	AHCYL1 (ENSCATG00000040429) #33	CSF1 (ENSCATG00000041720) #34	EPS8L3 (ENSCATG00000024267) #35	GSTM3 (ENSCATG00000041143) #36	ENSCATG00000038870	GSTM1 (ENSCATG00000038512) #37	GSTM2 (ENSCATG00000043260)
Drill	MODERN SPECIES	1661														KCNA3 (ENSMLEG00000028457) #20	KCNA2 (ENSMLEG00000001006) #21	KCNA10 (ENSMLEG00000024926) #22	PROK1 (ENSMLEG00000040384) #24	LAMTOR5 (ENSMLEG00000042513) #25	SLC16A4 (ENSMLEG00000033046) #26	RBM15 (ENSMLEG00000035727) #27	KCNC4 (ENSMLEG00000032814) #28	SLC6A17 (ENSMLEG00000028113) #29	ALX3 (ENSMLEG00000034611) #31	STRIP1 (ENSMLEG00000042322) #32	AHCYL1 (ENSMLEG00000043199) #33	CSF1 (ENSMLEG00000036428) #34	EPS8L3 (ENSMLEG00000034032) #35	GSTM3 (ENSMLEG00000041437) #36
Macaca	ANCESTRAL SPECIES		ENSGT00390000015005	ENSGT00390000001958.t.a.g #7	ENSGT00390000010711 #8	ENSGT00940000162223 #9	ENSGT00390000001017 #11	ENSGT00940000154557.c.a #12	ENSGT00940000154557.c.b #13	ENSGT00940000163351 #14	ENSGT00950000182931.A #15	ENSGT00950000183117.a.b #16	ENSGT01030000234578.B.b #17	ENSGT00390000017353 #18	ENSGT00940000159669 #19	ENSGT00940000160210 #20	ENSGT00940000158688 #21	ENSGT00940000159534 #22	ENSGT00940000161331 #24	ENSGT00390000006247 #25	ENSGT00940000158411 #26	ENSGT00940000158161 #27	ENSGT00940000158860 #28	ENSGT00940000156542 #29	ENSGT00940000160669 #31	ENSGT00400000022095.b #32	ENSGT00950000182981.b.f.b #33	ENSGT00390000015805 #34	ENSGT00940000158169 #35	ENSGT00940000157663 #36	ENSGT00940000154679	ENSGT00950000183011.d	ENSGT00940000158399
Macaca_a	ANCESTRAL SPECIES		ENSGT00950000182857.a.a.b.a.r.a.b.b.b.a	ENSGT00390000015005	ENSGT00390000001958.t.a.g #7	ENSGT00390000010711 #8	ENSGT00940000162223 #9	ENSGT00390000001017 #11	ENSGT00940000154557.c.a #12	ENSGT00940000154557.c.b #13	ENSGT00940000163351 #14	ENSGT00950000182931.A #15	ENSGT00950000183117.a.b #16	ENSGT00390000017353 #18	ENSGT00940000159669 #19	ENSGT00940000160210 #20	ENSGT00940000158688 #21	ENSGT00940000159534 #22	ENSGT00940000161331 #24	ENSGT00390000006247 #25	ENSGT00940000158411 #26	ENSGT00940000158161 #27	ENSGT00940000158860 #28	ENSGT00940000156542 #29	ENSGT00940000160669 #31	ENSGT00400000022095.b #32	ENSGT00950000182981.b.f.b #33	ENSGT00390000015805 #34	ENSGT00940000158169 #35	ENSGT00940000157663 #36	ENSGT00940000155416.a.b.f	ENSGT00950000183011.d	ENSGT00940000158399
Rhesus	MODERN SPECIES		TMIGD3 (ENSMMUG00000003581)	C1H1orf162 (ENSMMUG00000003579)	ATP5PB (ENSMMUG00000065322) #7	OVGP1 (ENSMMUG00000003309) #9	PIFO (ENSMMUG00000053581) #11	CHIA (ENSMMUG00000008857) #12	ENSMMUG00000002454 #13	CHI3L2 (ENSMMUG00000002455) #14	DENND2D (ENSMMUG00000049470) #15	CEPT1 (ENSMMUG00000002461) #16	LRIF1 (ENSMMUG00000000812) #18	CD53 (ENSMMUG00000000811) #19	ENSMMUG00000059214	KCNA3 (ENSMMUG00000018684) #20	KCNA2 (ENSMMUG00000054017) #21	KCNA10 (ENSMMUG00000016056) #22	ENSMMUG00000062177	PROK1 (ENSMMUG00000064173) #24	LAMTOR5 (ENSMMUG00000049848) #25	SLC16A4 (ENSMMUG00000015022) #26	RBM15 (ENSMMUG00000015020) #27	KCNC4 (ENSMMUG00000004614) #28	SLC6A17 (ENSMMUG00000021544) #29	ALX3 (ENSMMUG00000060619) #31	STRIP1 (ENSMMUG00000005426) #32	AHCYL1 (ENSMMUG00000022715) #33	CSF1 (ENSMMUG00000002680) #34	EPS8L3 (ENSMMUG00000008030) #35	GSTM3 (ENSMMUG00000008029) #36	GSTM5 (ENSMMUG00000020851)	AMPD2 (ENSMMUG00000005820)
Crab-eating macaque	MODERN SPECIES		C1orf162 (ENSMFAG00000034319)	ATP5PB (ENSMFAG00000037534) #7	WDR77 (ENSMFAG00000030055) #8	OVGP1 (ENSMFAG00000034315) #9	PIFO (ENSMFAG00000038084) #11	CHIA (ENSMFAG00000003339) #12	ENSMFAG00000046116 #13	CHI3L2 (ENSMFAG00000037152) #14	DENND2D (ENSMFAG00000036546) #15	CEPT1 (ENSMFAG00000044191) #16	LRIF1 (ENSMFAG00000045855) #18	CD53 (ENSMFAG00000002919) #19	ENSMFAG00000058133	KCNA3 (ENSMFAG00000007623) #20	KCNA2 (ENSMFAG00000000561) #21	KCNA10 (ENSMFAG00000016078) #22	PROK1 (ENSMFAG00000029321) #24	LAMTOR5 (ENSMFAG00000042380) #25	SLC16A4 (ENSMFAG00000041455) #26	RBM15 (ENSMFAG00000029929) #27	ENSMFAG00000055621	KCNC4 (ENSMFAG00000002458) #28	SLC6A17 (ENSMFAG00000044649) #29	ALX3 (ENSMFAG00000000542) #31	STRIP1 (ENSMFAG00000031880) #32	AHCYL1 (ENSMFAG00000044517) #33	CSF1 (ENSMFAG00000040515) #34	EPS8L3 (ENSMFAG00000041246) #35	GSTM3 (ENSMFAG00000035350) #36	GSTM5 (ENSMFAG00000038873)	AMPD2 (ENSMFAG00000040571)
Pig-tailed macaque	MODERN SPECIES	556	C1orf162 (ENSMNEG00000034601)	ENSMNEG00000041454 #7	WDR77 (ENSMNEG00000030129) #8	OVGP1 (ENSMNEG00000036501) #9	PIFO (ENSMNEG00000027237) #11	CHIA (ENSMNEG00000032841) #12	ENSMNEG00000029808 #13	CHI3L2 (ENSMNEG00000037931) #14	DENND2D (ENSMNEG00000039934) #15	CEPT1 (ENSMNEG00000039798) #16	DRAM2 (ENSMNEG00000015412) #17	LRIF1 (ENSMNEG00000030627) #18	CD53 (ENSMNEG00000030620) #19	KCNA3 (ENSMNEG00000021930) #20	KCNA2 (ENSMNEG00000034004) #21	KCNA10 (ENSMNEG00000027581) #22	PROK1 (ENSMNEG00000036347) #24	LAMTOR5 (ENSMNEG00000012456) #25	SLC16A4 (ENSMNEG00000044851) #26	RBM15 (ENSMNEG00000045235) #27	KCNC4 (ENSMNEG00000044424) #28	SLC6A17 (ENSMNEG00000036850) #29	ALX3 (ENSMNEG00000045454) #31	STRIP1 (ENSMNEG00000044805) #32	AHCYL1 (ENSMNEG00000034719) #33	CSF1 (ENSMNEG00000037665) #34	EPS8L3 (ENSMNEG00000036340) #35	GSTM3 (ENSMNEG00000044755) #36	GSTM4 (ENSMNEG00000028409)	AMPD2 (ENSMNEG00000037305)	GNAT2 (ENSMNEG00000026032)
Vervet Monkey	MODERN SPECIES	12	ENSCSAG00000000170	C1orf162 (ENSCSAG00000001578)	ATP5PB (ENSCSAG00000001577) #7	WDR77 (ENSCSAG00000001576) #8	OVGP1 (ENSCSAG00000001575) #9	PIFO (ENSCSAG00000001574) #11	ENSCSAG00000001573 #13	CHI3L2 (ENSCSAG00000001572) #14	DENND2D (ENSCSAG00000001571) #15	CEPT1 (ENSCSAG00000001570) #16	DRAM2 (ENSCSAG00000001569) #17	LRIF1 (ENSCSAG00000001568) #18	CD53 (ENSCSAG00000001567) #19	KCNA3 (ENSCSAG00000000169) #20	KCNA2 (ENSCSAG00000000168) #21	KCNA10 (ENSCSAG00000000167) #22	PROK1 (ENSCSAG00000001566) #24	ENSCSAG00000001565 #25	SLC16A4 (ENSCSAG00000001564) #26	RBM15 (ENSCSAG00000001563) #27	KCNC4 (ENSCSAG00000001562) #28	SLC6A17 (ENSCSAG00000001561) #29	UBL4B (ENSCSAG00000000166) #30	ALX3 (ENSCSAG00000001560) #31	STRIP1 (ENSCSAG00000001559) #32	AHCYL1 (ENSCSAG00000001558) #33	CSF1 (ENSCSAG00000001557) #34	EPS8L3 (ENSCSAG00000001556) #35	GSTM3 (ENSCSAG00000001555) #36	GSTM5 (ENSCSAG00000001554)	GSTM4 (ENSCSAG00000001553)
Rhinopithecus	ANCESTRAL SPECIES	10	ENSGT00390000010711 #8	ENSGT00940000162223 #9	ENSGT00940000163644	ENSGT00390000001017 #11	ENSGT00940000154557.c.a #12	ENSGT00940000154557.c.b #13	ENSGT00940000163351 #14	ENSGT00950000182931.A #15	ENSGT00950000183117.a.b #16	ENSGT01030000234578.B.b #17	ENSGT00390000017353 #18	ENSGT00940000159669 #19	ENSGT00940000160210 #20	ENSGT00940000158688 #21	ENSGT00910000147898	ENSGT00940000159534 #22	ENSGT00940000161331 #24	ENSGT00390000006247 #25	ENSGT01050000244818	ENSGT00940000158468	ENSGT00910000144243	ENSGT00940000155661	ENSGT00940000156746	ENSGT00530000063000.a.a.a	ENSGT00940000161645.b	ENSGT00940000153733.B	ENSGT00390000004336	ENSGT00390000015466	ENSGT00940000155542.b	ENSGT00390000012628.a.a.d	ENSGT00940000153947.B
Black snub-nosed monkey	MODERN SPECIES	299	OVGP1 (ENSRBIG00000043088) #9	ENSRBIG00000028657	PIFO (ENSRBIG00000026378) #11	CHIA (ENSRBIG00000030484) #12	ENSRBIG00000035219 #13	CHI3L2 (ENSRBIG00000028615) #14	DENND2D (ENSRBIG00000038291) #15	CEPT1 (ENSRBIG00000043839) #16	DRAM2 (ENSRBIG00000035397) #17	ENSRBIG00000002639	LRIF1 (ENSRBIG00000026438) #18	CD53 (ENSRBIG00000003451) #19	KCNA3 (ENSRBIG00000019220) #20	KCNA2 (ENSRBIG00000038695) #21	ENSRBIG00000039627	KCNA10 (ENSRBIG00000023654) #22	PROK1 (ENSRBIG00000036366) #24	LAMTOR5 (ENSRBIG00000041547) #25	SLC16A4 (ENSRBIG00000043053) #26	RBM15 (ENSRBIG00000044261) #27	KCNC4 (ENSRBIG00000039950) #28	SLC6A17 (ENSRBIG00000009407) #29	ALX3 (ENSRBIG00000035923) #31	STRIP1 (ENSRBIG00000044711) #32	AHCYL1 (ENSRBIG00000032445) #33	CSF1 (ENSRBIG00000032810) #34	EPS8L3 (ENSRBIG00000030941) #35	GSTM3 (ENSRBIG00000033129) #36	ENSRBIG00000041248	GSTM1 (ENSRBIG00000033337) #37
Golden snub-nosed monkey	MODERN SPECIES	2567													KCNA3 (ENSRROG00000001141) #20	KCNA2 (ENSRROG00000025653) #21	ENSRROG00000042863	KCNA10 (ENSRROG00000015016) #22	PROK1 (ENSRROG00000034358) #24	LAMTOR5 (ENSRROG00000044496) #25	SLC16A4 (ENSRROG00000028929) #26	ENSRROG00000032809	RBM15 (ENSRROG00000045519) #27	KCNC4 (ENSRROG00000043351) #28	SLC6A17 (ENSRROG00000039067) #29	ENSRROG00000029340	ALX3 (ENSRROG00000040344) #31	STRIP1 (ENSRROG00000032934) #32	AHCYL1 (ENSRROG00000036805) #33	CSF1 (ENSRROG00000034878) #34	EPS8L3 (ENSRROG00000042988) #35	GSTM3 (ENSRROG00000034140) #36
Strepsirrhini	ANCESTRAL SPECIES		ENSGT00930000151073	ENSGT00390000015005	ENSGT00390000001958.p #7	ENSGT00390000010711 #8	ENSGT00940000163644	ENSGT00390000001017 #11	ENSGT00940000154557.c.a #12	ENSGT00940000163351 #14	ENSGT00950000182931.A #15	ENSGT00950000183117.a.b #16	ENSGT01030000234578.B.b #17	ENSGT00390000017353 #18	ENSGT00940000159669 #19	ENSGT00940000160210 #20	ENSGT00940000158688 #21	ENSGT00940000159534 #22	ENSGT00940000162710 #23	ENSGT00940000161331 #24	ENSGT00390000006247 #25	ENSGT00940000158411 #26	ENSGT00940000158161 #27	ENSGT00940000158860 #28	ENSGT00940000156542 #29	ENSGT00940000163477 #30	ENSGT00940000160669 #31	ENSGT00400000022095.b #32	ENSGT00950000182981.b.f.b #33	ENSGT00390000015805 #34	ENSGT00940000158169 #35	ENSGT00940000157663 #36	ENSGT00940000154679
Lemuriformes	ANCESTRAL SPECIES		ENSGT00930000151073	ENSGT00390000015005	ENSGT00390000001958.p #7	ENSGT00390000010711 #8	ENSGT00940000163644	ENSGT00390000001017 #11	ENSGT00940000154557.c.a #12	ENSGT00940000163351 #14	ENSGT00950000182931.A #15	ENSGT00950000183117.a.b #16	ENSGT01030000234578.B.b #17	ENSGT00390000017353 #18	ENSGT00940000159669 #19	ENSGT00940000160210 #20	ENSGT00940000158688 #21	ENSGT00940000159534 #22	ENSGT00940000162710 #23	ENSGT00940000161331 #24	ENSGT00390000006247 #25	ENSGT00940000158411 #26	ENSGT00940000158161 #27	ENSGT00940000158860 #28	ENSGT00940000156542 #29	ENSGT00940000163477 #30	ENSGT00940000160669 #31	ENSGT00400000022095.b #32	ENSGT00950000182981.b.f.b #33	ENSGT00390000015805 #34	ENSGT00940000158169 #35	ENSGT00940000157663 #36	ENSGT00940000154679
Lemuriformes_a	ANCESTRAL SPECIES	31	ENSGT00930000151073	ENSGT00390000015005	ENSGT00390000001958.p #7	ENSGT00390000010711 #8	ENSGT00940000163644	ENSGT00390000001017 #11	ENSGT00940000154557.c.a #12	ENSGT00940000163351 #14	ENSGT00950000182931.A #15	ENSGT00950000183117.a.b #16	ENSGT01030000234578.B.b #17	ENSGT00390000017353 #18	ENSGT00940000159669 #19	ENSGT00940000160210 #20	ENSGT00940000158688 #21	ENSGT00940000159534 #22	ENSGT00940000162710 #23	ENSGT00940000161331 #24	ENSGT00390000006247 #25	ENSGT00940000158411 #26	ENSGT00940000158161 #27	ENSGT00940000158860 #28	ENSGT00940000156542 #29	ENSGT00940000160669 #31	ENSGT00400000022095.b #32	ENSGT00950000182981.b.f.b #33	ENSGT00390000015805 #34	ENSGT00940000158169 #35	ENSGT00940000157663 #36	ENSGT00940000154679	ENSGT00940000155416.a.b
Greater bamboo lemur	MODERN SPECIES	507	TMIGD3 (ENSPSMG00000010613)	C1orf162 (ENSPSMG00000010617)	ATP5PB (ENSPSMG00000010639) #7	WDR77 (ENSPSMG00000010667) #8	ENSPSMG00000010689	PIFO (ENSPSMG00000010697) #11	CHI3L2 (ENSPSMG00000010734) #14	ENSPSMG00000010739	DENND2D (ENSPSMG00000010765) #15	CEPT1 (ENSPSMG00000010781) #16	DRAM2 (ENSPSMG00000010794) #17	LRIF1 (ENSPSMG00000010799) #18	CD53 (ENSPSMG00000010829) #19	KCNA3 (ENSPSMG00000010835) #20	KCNA2 (ENSPSMG00000010845) #21	KCNA10 (ENSPSMG00000010858) #22	ENSPSMG00000010875 #23	PROK1 (ENSPSMG00000010882) #24	LAMTOR5 (ENSPSMG00000010903) #25	SLC16A4 (ENSPSMG00000011010) #26	RBM15 (ENSPSMG00000011051) #27	ENSPSMG00000011056	KCNC4 (ENSPSMG00000011091) #28	SLC6A17 (ENSPSMG00000011107) #29
Bushbaby	MODERN SPECIES	125		ENSOGAG00000027675	PIFO (ENSOGAG00000010810) #11	CHIA (ENSOGAG00000010808) #12	ENSOGAG00000030379	ENSOGAG00000010806 #13	ENSOGAG00000033823	CHI3L2 (ENSOGAG00000010804) #14	DENND2D (ENSOGAG00000010802) #15	CEPT1 (ENSOGAG00000010799) #16	DRAM2 (ENSOGAG00000010797) #17	LRIF1 (ENSOGAG00000009969) #18	CD53 (ENSOGAG00000016713) #19	KCNA3 (ENSOGAG00000007394) #20	KCNA2 (ENSOGAG00000009201) #21	KCNA10 (ENSOGAG00000026968) #22	ENSOGAG00000029987 #23	PROK1 (ENSOGAG00000009197) #24	LAMTOR5 (ENSOGAG00000033478) #25	SLC16A4 (ENSOGAG00000009191) #26	RBM15 (ENSOGAG00000009182) #27	KCNC4 (ENSOGAG00000033120) #28	SLC6A17 (ENSOGAG00000013841) #29	UBL4B (ENSOGAG00000003592) #30	ALX3 (ENSOGAG00000024075) #31	STRIP1 (ENSOGAG00000012966) #32	AHCYL1 (ENSOGAG00000012960) #33	CSF1 (ENSOGAG00000033333) #34	EPS8L3 (ENSOGAG00000015812) #35	GSTM3 (ENSOGAG00000007509) #36	GSTM1 (ENSOGAG00000034185) #37
Euarchontoglires_A	ANCESTRAL SPECIES		ENSGT00390000015005	ENSGT00390000001958 #7	ENSGT00390000010711 #8	ENSGT00940000162223 #9	ENSGT00390000001017 #11	ENSGT00940000154557.c.a #12	ENSGT00940000163351 #14	ENSGT00950000182931.A #15	ENSGT00950000183117.a.b #16	ENSGT01030000234578.B.b #17	ENSGT00390000017353 #18	ENSGT00940000159669 #19	ENSGT00940000163100.b	ENSGT00940000160210 #20	ENSGT00940000158688 #21	ENSGT00940000159534 #22	ENSGT00940000162710 #23	ENSGT00940000161331 #24	ENSGT00390000006247 #25	ENSGT00940000158411 #26	ENSGT00940000158161 #27	ENSGT00940000158860 #28	ENSGT00940000156542 #29	ENSGT00940000163477 #30	ENSGT00940000160669 #31	ENSGT00400000022095.b #32	ENSGT00950000182981.b.f.b #33	ENSGT00390000015805 #34	ENSGT00940000158169 #35	ENSGT00940000157663 #36	ENSGT00940000155416.a.a
Tree shrew	MODERN SPECIES	3035																KCNA10 (ENSTBEG00000001228) #22	PROK1 (ENSTBEG00000000984) #24	LAMTOR5 (ENSTBEG00000009117) #25	ENSTBEG00000008543 #26	RBM15 (ENSTBEG00000008339) #27
Glires	ANCESTRAL SPECIES		ENSGT00930000151073	ENSGT00390000015005	ENSGT00390000001958 #7	ENSGT00390000010711 #8	ENSGT00940000162223 #9	ENSGT00390000001017 #11	ENSGT00940000154557.c.a #12	ENSGT00950000182931.A #15	ENSGT00950000183117.a.b #16	ENSGT01030000234578.B.b #17	ENSGT00390000017353 #18	ENSGT00940000159669 #19	ENSGT00940000163100.b	ENSGT00940000160210 #20	ENSGT00940000158688 #21	ENSGT00940000159534 #22	ENSGT00940000162710 #23	ENSGT00940000161331 #24	ENSGT00390000006247 #25	ENSGT00940000158411 #26	ENSGT00940000158161 #27	ENSGT00940000158860 #28	ENSGT00940000156542 #29	ENSGT00940000163477 #30	ENSGT00940000160669 #31	ENSGT00400000022095.b #32	ENSGT00950000182981.b.f.b #33	ENSGT00390000015805 #34	ENSGT00940000158169 #35	ENSGT00940000157663 #36	ENSGT00940000155416.a.a
Rodentia	ANCESTRAL SPECIES		ENSGT00930000151073	ENSGT00390000015005	ENSGT00390000001958 #7	ENSGT00390000010711 #8	ENSGT00940000162223 #9	ENSGT00390000001017 #11	ENSGT00940000154557.c.a #12	ENSGT00950000182931.A #15	ENSGT00950000183117.a.b #16	ENSGT01030000234578.B.b #17	ENSGT00390000017353 #18	ENSGT00940000159669 #19	ENSGT00940000163100.b	ENSGT00940000160210 #20	ENSGT00940000158688 #21	ENSGT00940000159534 #22	ENSGT00940000162710 #23	ENSGT00940000161331 #24	ENSGT00390000006247.tc #25	ENSGT00940000158411 #26	ENSGT00940000158161 #27	ENSGT00940000158860 #28	ENSGT00940000156542 #29	ENSGT00940000163477 #30	ENSGT00940000160669 #31	ENSGT00400000022095.b #32	ENSGT00950000182981.b.f.b #33	ENSGT00390000015805 #34	ENSGT00940000158169 #35	ENSGT00940000157663 #36	ENSGT00940000155416.a.a
Rodentia_A	ANCESTRAL SPECIES		ENSGT00930000151073	ENSGT00390000015005	ENSGT00390000001958 #7	ENSGT00390000010711 #8	ENSGT00940000162223 #9	ENSGT00390000001017 #11	ENSGT00940000154557.c.a #12	ENSGT00950000182931.A #15	ENSGT00950000183117.a.b #16	ENSGT01030000234578.B.b #17	ENSGT00390000017353 #18	ENSGT00940000159669 #19	ENSGT00940000163100.b	ENSGT00940000160210 #20	ENSGT00940000158688 #21	ENSGT00940000159534 #22	ENSGT00940000162710 #23	ENSGT00940000161331 #24	ENSGT00390000006247.tc #25	ENSGT00940000158411 #26	ENSGT00940000158161 #27	ENSGT00940000158860 #28	ENSGT00940000156542 #29	ENSGT00940000163477 #30	ENSGT00940000160669 #31	ENSGT00400000022095.b #32	ENSGT00950000182981.b.f.b #33	ENSGT00390000015805 #34	ENSGT00940000158169 #35	ENSGT00940000157663 #36	ENSGT00940000155416.a.b
Sciuridae	ANCESTRAL SPECIES		ENSGT00930000151073	ENSGT00390000015005	ENSGT00390000001958 #7	ENSGT00390000010711 #8	ENSGT00940000162223 #9	ENSGT00390000001017 #11	ENSGT00940000154557.c.a #12	ENSGT00950000182931.A #15	ENSGT00950000183117.a.b #16	ENSGT01030000234578.B.b #17	ENSGT00390000017353 #18	ENSGT00940000159669 #19	ENSGT00940000163100.b	ENSGT00940000160210 #20	ENSGT00940000158688 #21	ENSGT00940000159534 #22	ENSGT00940000162710 #23	ENSGT00940000161331 #24	ENSGT00390000006247.tc #25	ENSGT00940000158411 #26	ENSGT00940000158161 #27	ENSGT00940000158860 #28	ENSGT00940000156542 #29	ENSGT00940000163477 #30	ENSGT00940000160669 #31	ENSGT00400000022095.b #32	ENSGT00950000182981.b.f.b #33	ENSGT00390000015805 #34	ENSGT00940000158169 #35	ENSGT00940000157663 #36	ENSGT00940000154679
Marmotini	ANCESTRAL SPECIES	74								ENSGT00950000182931.A #15	ENSGT00950000183117.a.b #16	ENSGT01030000234578.B.b #17	ENSGT00390000017353 #18	ENSGT00940000159669 #19	ENSGT00940000163100.b	ENSGT00940000160210 #20	ENSGT00940000158688 #21	ENSGT00940000159534 #22	ENSGT00940000162710 #23	ENSGT01020000230624	ENSGT00940000161331 #24	ENSGT00390000006247.tc #25	ENSGT00940000158411 #26	ENSGT00940000158161 #27	ENSGT00940000158860 #28	ENSGT00940000156542 #29	ENSGT00940000163477 #30	ENSGT00940000160669 #31	ENSGT00400000022095.b #32	ENSGT00950000182981.b.f.b #33	ENSGT00390000015805 #34	ENSGT00940000158169 #35	ENSGT00940000157663 #36
Marmotini_b	ANCESTRAL SPECIES	107								ENSGT00950000182931.A #15	ENSGT00950000183117.a.b #16	ENSGT01030000234578.B.b #17	ENSGT00390000017353 #18	ENSGT00940000159669 #19	ENSGT00940000163100.b	ENSGT00940000160210 #20	ENSGT00940000158688 #21	ENSGT00940000159534 #22	ENSGT00940000162710 #23	ENSGT01020000230624	ENSGT00940000161331 #24	ENSGT00390000006247.tc #25	ENSGT00940000158411 #26	ENSGT00940000158161 #27	ENSGT00940000158860 #28	ENSGT00940000156542 #29	ENSGT00940000163477 #30	ENSGT00940000160669 #31	ENSGT00400000022095.b #32	ENSGT00950000182981.b.f.b #33	ENSGT00390000015805 #34	ENSGT00940000158169 #35	ENSGT00940000157663 #36
Squirrel	MODERN SPECIES	304							DENND2D (ENSSTOG00000011074) #15	CEPT1 (ENSSTOG00000027447) #16	DRAM2 (ENSSTOG00000011062) #17	LRIF1 (ENSSTOG00000023287) #18	CD53 (ENSSTOG00000006865) #19	ENSSTOG00000025563	ENSSTOG00000020374	KCNA3 (ENSSTOG00000026278) #20	KCNA2 (ENSSTOG00000023527) #21	KCNA10 (ENSSTOG00000019362) #22	ENSSTOG00000020941 #23	PROK1 (ENSSTOG00000005552) #24	LAMTOR5 (ENSSTOG00000003401) #25	SLC16A4 (ENSSTOG00000025557) #26	RBM15 (ENSSTOG00000026597) #27	KCNC4 (ENSSTOG00000009645) #28	SLC6A17 (ENSSTOG00000009625) #29	ALX3 (ENSSTOG00000009606) #31	STRIP1 (ENSSTOG00000009577) #32	AHCYL1 (ENSSTOG00000015618) #33	CSF1 (ENSSTOG00000023005) #34	ENSSTOG00000007262 #35	GSTM3 (ENSSTOG00000024196) #36	ENSSTOG00000019538 #37	ENSSTOG00000028721
Arctic ground squirrel	MODERN SPECIES	277							DENND2D (ENSUPAG00010016317) #15	CEPT1 (ENSUPAG00010016280) #16	DRAM2 (ENSUPAG00010016230) #17	ENSUPAG00010016216	LRIF1 (ENSUPAG00010016206) #18	CD53 (ENSUPAG00010016194) #19	ENSUPAG00010016189	KCNA3 (ENSUPAG00010016187) #20	KCNA2 (ENSUPAG00010016180) #21	KCNA10 (ENSUPAG00010016174) #22	ENSUPAG00010016166 #23	ENSUPAG00010016162	PROK1 (ENSUPAG00010016152) #24	LAMTOR5 (ENSUPAG00010016147) #25	SLC16A4 (ENSUPAG00010016126) #26	RBM15 (ENSUPAG00010016124) #27	KCNC4 (ENSUPAG00010016092) #28	SLC6A17 (ENSUPAG00010016070) #29	UBL4B (ENSUPAG00010016066) #30	ALX3 (ENSUPAG00010016060) #31	STRIP1 (ENSUPAG00010016038) #32	AHCYL1 (ENSUPAG00010016025) #33	CSF1 (ENSUPAG00010016005) #34	EPS8L3 (ENSUPAG00010015986) #35	GSTM3 (ENSUPAG00010015978) #36
Alpin marmot	MODERN SPECIES	100						DENND2D (ENSMMMG00000020907) #15	CEPT1 (ENSMMMG00000020876) #16	DRAM2 (ENSMMMG00000020861) #17	ENSMMMG00000020858	ENSMMMG00000020853 #18	ENSMMMG00000020850 #18	CD53 (ENSMMMG00000020840) #19	ENSMMMG00000020835	KCNA3 (ENSMMMG00000020829) #20	KCNA2 (ENSMMMG00000020828) #21	KCNA10 (ENSMMMG00000020825) #22	ENSMMMG00000020821 #23	ENSMMMG00000020814	PROK1 (ENSMMMG00000020809) #24	ENSMMMG00000020803 #25	SLC16A4 (ENSMMMG00000020793) #26	RBM15 (ENSMMMG00000020791) #27	KCNC4 (ENSMMMG00000020784) #28	SLC6A17 (ENSMMMG00000020765) #29	UBL4B (ENSMMMG00000020761) #30	ALX3 (ENSMMMG00000020755) #31	STRIP1 (ENSMMMG00000020741) #32	AHCYL1 (ENSMMMG00000020731) #33	CSF1 (ENSMMMG00000020723) #34	EPS8L3 (ENSMMMG00000020708) #35	GSTM3 (ENSMMMG00000020699) #36
Eurasian red squirrel	MODERN SPECIES		ENSSVLG00005017977 #7	WDR77 (ENSSVLG00005017918) #8	OVGP1 (ENSSVLG00005017787) #9	PIFO (ENSSVLG00005017626) #11	ENSSVLG00005017351 #12	DENND2D (ENSSVLG00005017048) #15	CEPT1 (ENSSVLG00005016962) #16	DRAM2 (ENSSVLG00005016915) #17	ENSSVLG00005016873	LRIF1 (ENSSVLG00005016841) #18	CD53 (ENSSVLG00005016771) #19	ENSSVLG00005016749	ENSSVLG00005016736	KCNA3 (ENSSVLG00005016719) #20	KCNA2 (ENSSVLG00005016685) #21	KCNA10 (ENSSVLG00005016662) #22	ENSSVLG00005016499 #23	ENSSVLG00005016446	PROK1 (ENSSVLG00005016403) #24	LAMTOR5 (ENSSVLG00005016364) #25	SLC16A4 (ENSSVLG00005015966) #26	RBM15 (ENSSVLG00005015755) #27	KCNC4 (ENSSVLG00005015639) #28	SLC6A17 (ENSSVLG00005015577) #29	UBL4B (ENSSVLG00005015517) #30	ALX3 (ENSSVLG00005015462) #31	STRIP1 (ENSSVLG00005015389) #32	AHCYL1 (ENSSVLG00005015290) #33	CSF1 (ENSSVLG00005015188) #34	EPS8L3 (ENSSVLG00005014646) #35	ENSSVLG00005014538 #36
Hystricomorpha	ANCESTRAL SPECIES	23	ENSGT01030000234555.a.a.b.a.b.a	ENSGT00930000151073	ENSGT00390000015005	ENSGT00390000001958 #7	ENSGT00390000010711 #8	ENSGT00940000162223 #9	ENSGT00390000001017 #11	ENSGT00950000182931.A #15	ENSGT00950000183117.a.b #16	ENSGT01030000234578.B.b #17	ENSGT00390000017353 #18	ENSGT00940000159669 #19	ENSGT00940000163100.b	ENSGT00940000160210 #20	ENSGT00940000158688 #21	ENSGT00940000159534 #22	ENSGT00940000161331 #24	ENSGT00390000006247.tc #25	ENSGT00940000158411 #26	ENSGT00940000158161 #27	ENSGT00940000158860 #28	ENSGT00940000156542 #29	ENSGT00940000163477 #30	ENSGT00940000160669 #31	ENSGT00400000022095.b #32	ENSGT00950000182981.b.f.b #33	ENSGT00390000015805 #34	ENSGT00940000158169 #35	ENSGT00940000157663 #36	ENSGT00940000155416.a.b	ENSGT00940000160258.k #37
Naked mole-rat female	MODERN SPECIES	10	RAP1A (ENSHGLG00000008139)	ADORA3 (ENSHGLG00000006832)	ENSHGLG00000004637	ENSHGLG00000041308	ENSHGLG00000004364 #7	WDR77 (ENSHGLG00000008077) #8	ENSHGLG00000036915 #9	PIFO (ENSHGLG00000048487) #11	DENND2D (ENSHGLG00000007550) #15	CEPT1 (ENSHGLG00000004650) #16	DRAM2 (ENSHGLG00000007043) #17	ENSHGLG00000036901 #18	CD53 (ENSHGLG00000007172) #19	KCNA3 (ENSHGLG00000004518) #20	KCNA2 (ENSHGLG00000040655) #21	KCNA10 (ENSHGLG00000020688) #22	PROK1 (ENSHGLG00000039661) #24	ENSHGLG00000045622 #25	Slc16a4 (ENSHGLG00000014623) #26	RBM15 (ENSHGLG00000038057) #27	ENSHGLG00000040075	KCNC4 (ENSHGLG00000015572) #28	SLC6A17 (ENSHGLG00000014129) #29	UBL4B (ENSHGLG00000041047) #30	ALX3 (ENSHGLG00000014566) #31	STRIP1 (ENSHGLG00000014558) #32	ENSHGLG00000040649 #33	ENSHGLG00000044952	CSF1 (ENSHGLG00000018247) #34	EPS8L3 (ENSHGLG00000012509) #35	GSTM3 (ENSHGLG00000010756) #36
Hystricomorpha_a	ANCESTRAL SPECIES	14	ENSGT01030000234555.a.a.b.a.b.a	ENSGT00930000151073	ENSGT00390000015005	ENSGT00390000001958 #7	ENSGT00390000010711 #8	ENSGT00940000162223 #9	ENSGT00390000001017 #11	ENSGT00950000182931.A #15	ENSGT00950000183117.a.b #16	ENSGT01030000234578.B.b #17	ENSGT00390000017353 #18	ENSGT00940000159669 #19	ENSGT00940000163100.b	ENSGT00940000160210 #20	ENSGT00940000158688 #21	ENSGT00940000159534 #22	ENSGT00940000161331 #24	ENSGT00390000006247.tc #25	ENSGT00940000158411 #26	ENSGT00940000158161 #27	ENSGT00940000158860 #28	ENSGT00940000156542 #29	ENSGT00940000163477 #30	ENSGT00940000160669 #31	ENSGT00400000022095.b #32	ENSGT00950000182981.b.f.b #33	ENSGT00390000015805 #34	ENSGT00940000158169 #35	ENSGT00940000157663 #36	ENSGT00940000155416.a.b	ENSGT00940000160258.k #37
Guinea pig	MODERN SPECIES	2	RAP1A (ENSCPOG00000032437)	ADORA3 (ENSCPOG00000032151)	C1orf162 (ENSCPOG00000025561)	ATP5PB (ENSCPOG00000014070) #7	WDR77 (ENSCPOG00000025009) #8	OVGP1 (ENSCPOG00000000902) #9	PIFO (ENSCPOG00000033762) #11	DENND2D (ENSCPOG00000003677) #15	CEPT1 (ENSCPOG00000011067) #16	DRAM2 (ENSCPOG00000003496) #17	ENSCPOG00000039442 #18	CD53 (ENSCPOG00000010280) #19	ENSCPOG00000023753	KCNA3 (ENSCPOG00000012373) #20	KCNA2 (ENSCPOG00000039886) #21	KCNA10 (ENSCPOG00000001971) #22	PROK1 (ENSCPOG00000039143) #24	LAMTOR5 (ENSCPOG00000033012) #25	SLC16A4 (ENSCPOG00000007529) #26	RBM15 (ENSCPOG00000007520) #27	KCNC4 (ENSCPOG00000012779) #28	SLC6A17 (ENSCPOG00000012775) #29	UBL4B (ENSCPOG00000036064) #30	ALX3 (ENSCPOG00000025705) #31	STRIP1 (ENSCPOG00000012774) #32	AHCYL1 (ENSCPOG00000011603) #33	ENSCPOG00000032571 #34	ENSCPOG00000013848 #35	GSTM3 (ENSCPOG00000009422) #36	GSTM1 (ENSCPOG00000007803) #37	AMPD2 (ENSCPOG00000011525)
Hystricomorpha_b	ANCESTRAL SPECIES	6	ENSGT00940000160251	ENSGT01030000234555.a.a.b.a.b.a	ENSGT00930000151073	ENSGT00390000015005	ENSGT00390000001958 #7	ENSGT00390000010711 #8	ENSGT00940000162223 #9	ENSGT00390000001017 #11	ENSGT00950000182931.A #15	ENSGT00950000183117.a.b #16	ENSGT01030000234578.B.b #17	ENSGT00390000017353 #18	ENSGT00940000159669 #19	ENSGT00940000160210 #20	ENSGT00940000158688 #21	ENSGT00940000159534 #22	ENSGT00940000161331 #24	ENSGT00390000006247.tc #25	ENSGT00940000158411 #26	ENSGT00940000158161 #27	ENSGT00940000158860 #28	ENSGT00940000156542 #29	ENSGT00940000163477 #30	ENSGT00940000160669 #31	ENSGT00400000022095.b #32	ENSGT00950000182981.b.f.b #33	ENSGT00390000015805 #34	ENSGT00940000158169 #35	ENSGT00940000157663 #36	ENSGT00940000155416.a.b	ENSGT00940000160258.k #37
Long-tailed chinchilla	MODERN SPECIES	142	RAP1A (ENSCLAG00000006589)	ADORA3 (ENSCLAG00000006054)	ENSCLAG00000009052	C1orf162 (ENSCLAG00000009693)	ATP5PB (ENSCLAG00000006182) #7	WDR77 (ENSCLAG00000005791) #8	OVGP1 (ENSCLAG00000005245) #9	PIFO (ENSCLAG00000007375) #11	DENND2D (ENSCLAG00000005887) #15	CEPT1 (ENSCLAG00000006226) #16	DRAM2 (ENSCLAG00000007313) #17	LRIF1 (ENSCLAG00000006529) #18	CD53 (ENSCLAG00000008592) #19	KCNA3 (ENSCLAG00000017746) #20	KCNA2 (ENSCLAG00000006952) #21	KCNA10 (ENSCLAG00000017689) #22	PROK1 (ENSCLAG00000006175) #24	LAMTOR5 (ENSCLAG00000005554) #25	SLC16A4 (ENSCLAG00000004685) #26	RBM15 (ENSCLAG00000008406) #27	KCNC4 (ENSCLAG00000008289) #28	SLC6A17 (ENSCLAG00000011786) #29	UBL4B (ENSCLAG00000009392) #30	ALX3 (ENSCLAG00000009014) #31	STRIP1 (ENSCLAG00000008340) #32	AHCYL1 (ENSCLAG00000005190) #33	CSF1 (ENSCLAG00000007673) #34	EPS8L3 (ENSCLAG00000009538) #35	GSTM3 (ENSCLAG00000007701) #36	GSTM2 (ENSCLAG00000011395)	AMPD2 (ENSCLAG00000006566)
Degu	MODERN SPECIES	125									COPG2 (ENSODEG00000004971)	TSGA13 (ENSODEG00000005295)	ENSODEG00000019319	LRIF1 (ENSODEG00000006876) #18	CD53 (ENSODEG00000007107) #19	KCNA3 (ENSODEG00000004643) #20	KCNA2 (ENSODEG00000019179) #21	KCNA10 (ENSODEG00000019298) #22	PROK1 (ENSODEG00000005529) #24	ENSODEG00000005563 #25	SLC16A4 (ENSODEG00000005794) #26	RBM15 (ENSODEG00000019343) #27	KCNC4 (ENSODEG00000004321) #28	SLC6A17 (ENSODEG00000004456) #29	ALX3 (ENSODEG00000004536) #31	STRIP1 (ENSODEG00000004829) #32	AHCYL1 (ENSODEG00000007560) #33	CSF1 (ENSODEG00000007919) #34	ENSODEG00000004287 #35	ENSODEG00000004609 #36	GSTM2 (ENSODEG00000005236)	ENSODEG00000005640 #37	ENSODEG00000005104 #37
Rodentia_B	ANCESTRAL SPECIES		ENSGT00930000151073	ENSGT00390000015005	ENSGT00390000001958 #7	ENSGT00390000010711 #8	ENSGT00940000162223 #9	ENSGT00390000001017 #11	ENSGT00940000154557.c.a #12	ENSGT00950000182931.A #15	ENSGT00950000183117.a.b #16	ENSGT01030000234578.B.b #17	ENSGT00390000017353 #18	ENSGT00940000159669 #19	ENSGT00940000163100.b	ENSGT00940000160210 #20	ENSGT00940000158688 #21	ENSGT00940000159534 #22	ENSGT00940000162710 #23	ENSGT00940000161331 #24	ENSGT00390000006247.tc #25	ENSGT00940000158411 #26	ENSGT00940000158161 #27	ENSGT00940000158860 #28	ENSGT00940000156542 #29	ENSGT00940000163477 #30	ENSGT00940000160669 #31	ENSGT00400000022095.b #32	ENSGT00950000182981.b.f.b #33	ENSGT00390000015805 #34	ENSGT00940000158169 #35	ENSGT00940000157663 #36	ENSGT00940000160258.j.a #37
Kangaroo rat	MODERN SPECIES	465												Lrif1 (ENSDORG00000003226) #18	Cd53 (ENSDORG00000016195) #19	Kcna3 (ENSDORG00000004353) #20	Kcna2 (ENSDORG00000004354) #21	Kcna10 (ENSDORG00000011160) #22	Cym (ENSDORG00000026003) #23	Prok1 (ENSDORG00000002158) #24	ENSDORG00000005672 #25	Slc16a4 (ENSDORG00000005670) #26	Rbm15 (ENSDORG00000005669) #27	Kcnc4 (ENSDORG00000005864) #28	Slc6a17 (ENSDORG00000005866) #29	Ubl4b (ENSDORG00000003357) #30	Alx3 (ENSDORG00000007888) #31	Strip1 (ENSDORG00000007886) #32	Ahcyl1 (ENSDORG00000015248) #33	Csf1 (ENSDORG00000015250) #34	ENSDORG00000026851	ENSDORG00000000760 #35	Gstm5 (ENSDORG00000000769) #36
Myomorpha	ANCESTRAL SPECIES	12	ENSGT00930000151073	ENSGT00390000015005	ENSGT00390000001958 #7	ENSGT00390000010711 #8	ENSGT00940000162223 #9	ENSGT00390000001017 #11	ENSGT00940000154557.c.a.d #12	ENSGT00950000182931.A #15	ENSGT00950000183117.a.b #16	ENSGT01030000234578.B.b #17	ENSGT00390000017353 #18	ENSGT00940000159669 #19	ENSGT00940000163100.b	ENSGT00940000160210 #20	ENSGT00940000158688 #21	ENSGT00940000159534 #22	ENSGT00940000162710 #23	ENSGT00940000161331 #24	ENSGT00390000006247.tc #25	ENSGT00940000158411 #26	ENSGT00940000158161 #27	ENSGT00940000158860 #28	ENSGT00940000156542 #29	ENSGT00940000163477 #30	ENSGT00940000160669 #31	ENSGT00400000022095.b #32	ENSGT00950000182981.b.f.b #33	ENSGT00390000015805 #34	ENSGT00940000158169 #35	ENSGT00940000157663 #36	ENSGT00940000155416.a.b
Muroidea	ANCESTRAL SPECIES	6	ENSGT00930000151073	ENSGT00390000015005	ENSGT00390000001958 #7	ENSGT00390000010711 #8	ENSGT00940000162223 #9	ENSGT00390000001017 #11	ENSGT00940000154557.c.a.d #12	ENSGT00950000182931.A #15	ENSGT00950000183117.a.b #16	ENSGT01030000234578.B.b #17	ENSGT00390000017353 #18	ENSGT00940000159669 #19	ENSGT00940000163100.b	ENSGT00940000160210 #20	ENSGT00940000158688 #21	ENSGT00940000159534 #22	ENSGT00940000162710 #23	ENSGT00940000161331 #24	ENSGT00390000006247.tc #25	ENSGT00940000158411 #26	ENSGT00940000158161 #27	ENSGT00940000158860 #28	ENSGT00940000156542 #29	ENSGT00940000163477 #30	ENSGT00940000160669 #31	ENSGT00400000022095.b #32	ENSGT00950000182981.b.f.b #33	ENSGT00390000015805 #34	ENSGT00940000158169 #35	ENSGT00940000157663 #36	ENSGT00940000155416.a.b
Muroidea_A	ANCESTRAL SPECIES	5	ENSGT00390000010711 #8	ENSGT00940000162223 #9	ENSGT00390000001017 #11	ENSGT00940000154557.c.a.d.a.b #12	ENSGT00940000154557.c.a.c #12	ENSGT00940000154557.c.a.d.a.a #12	ENSGT00940000154557.c.a.d.b #12	ENSGT00950000182931.A #15	ENSGT00950000183117.a.b #16	ENSGT01030000234578.B.b #17	ENSGT00390000017353 #18	ENSGT00940000159669 #19	ENSGT00940000163100.b	ENSGT00940000160210 #20	ENSGT00940000158688 #21	ENSGT00940000159534 #22	ENSGT00940000162710 #23	ENSGT00940000161331 #24	ENSGT00390000006247.tc #25	ENSGT00940000158411 #26	ENSGT00940000158161 #27	ENSGT00940000158860 #28	ENSGT00940000156542 #29	ENSGT00940000163477 #30	ENSGT00940000160669 #31	ENSGT00400000022095.b #32	ENSGT00950000182981.b.f.b #33	ENSGT00390000015805 #34	ENSGT00940000158169 #35	ENSGT00940000157663 #36	ENSGT00940000155416.a.a.h
Cricetidae	ANCESTRAL SPECIES	6	ENSGT00390000010711 #8	ENSGT00940000162223 #9	ENSGT00390000001017 #11	ENSGT00940000154557.c.a.d.a.b #12	ENSGT00940000154557.c.a.c #12	ENSGT00940000154557.c.a.d.a.a #12	ENSGT00940000154557.c.a.d.b #12	ENSGT00950000182931.A #15	ENSGT00950000183117.a.b #16	ENSGT01030000234578.B.b #17	ENSGT00390000017353 #18	ENSGT00940000159669 #19	ENSGT00940000163100.b	ENSGT00940000160210 #20	ENSGT00940000158688 #21	ENSGT00940000159534 #22	ENSGT00940000162710 #23	ENSGT00940000161331 #24	ENSGT00390000006247.tc #25	ENSGT00940000158411 #26	ENSGT00940000158161 #27	ENSGT00940000158860 #28	ENSGT00940000156542 #29	ENSGT00940000163477 #30	ENSGT00940000160669 #31	ENSGT00400000022095.b #32	ENSGT00950000182981.b.f.b #33	ENSGT00390000015805 #34	ENSGT00940000158169 #35	ENSGT00940000157663 #36	ENSGT00940000160258.j.a.a.b #37
Cricetidae_B	ANCESTRAL SPECIES	3	ENSGT00390000001958 #7	ENSGT00390000010711 #8	ENSGT00940000162223 #9	ENSGT00390000001017 #11	ENSGT00940000154557.c.a.d.a.b #12	ENSGT00940000154557.c.a.d.a.a #12	ENSGT00940000154557.c.a.d.b #12	ENSGT00950000182931.A #15	ENSGT00950000183117.a.b #16	ENSGT01030000234578.B.b #17	ENSGT00390000017353 #18	ENSGT00940000159669 #19	ENSGT00940000163100.b	ENSGT00940000160210 #20	ENSGT00940000158688 #21	ENSGT00940000159534 #22	ENSGT00940000162710 #23	ENSGT00940000161331 #24	ENSGT00390000006247.tc #25	ENSGT00940000158411 #26	ENSGT00940000158161 #27	ENSGT00940000158860 #28	ENSGT00940000156542 #29	ENSGT00940000163477 #30	ENSGT00940000160669 #31	ENSGT00400000022095.b #32	ENSGT00950000182981.b.f.b #33	ENSGT00390000015805 #34	ENSGT00940000158169 #35	ENSGT00940000157663 #36	ENSGT00940000160258.j.a.a.b #37
Northern American deer mouse	MODERN SPECIES	19	ENSPEMG00000019924 #9	Pifo (ENSPEMG00000000041) #11	Chil5 (ENSPEMG00000019959) #12	ENSPEMG00000007488 #12	ENSPEMG00000012567 #12	Chil6 (ENSPEMG00000022931) #12	ENSPEMG00000027700	Dennd2d (ENSPEMG00000022369) #15	Cept1 (ENSPEMG00000022125) #16	Dram2 (ENSPEMG00000022926) #17	Lrif1 (ENSPEMG00000013649) #18	Cd53 (ENSPEMG00000013033) #19	Or11i1 (ENSPEMG00000025772)	Kcna3 (ENSPEMG00000012121) #20	Kcna2 (ENSPEMG00000011850) #21	Kcna10 (ENSPEMG00000011458) #22	Cym (ENSPEMG00000011072) #23	Prok1 (ENSPEMG00000010529) #24	Lamtor5 (ENSPEMG00000010322) #25	Slc16a4 (ENSPEMG00000005593) #26	Rbm15 (ENSPEMG00000000014) #27	Kcnc4 (ENSPEMG00000018006) #28	Slc6a17 (ENSPEMG00000015829) #29	Ubl4b (ENSPEMG00000013594) #30	Alx3 (ENSPEMG00000012612) #31	Strip1 (ENSPEMG00000009891) #32	Ahcyl1 (ENSPEMG00000008396) #33	Csf1 (ENSPEMG00000007138) #34	Eps8l3 (ENSPEMG00000016727) #35	Gstm5 (ENSPEMG00000015222) #36	ENSPEMG00000028266
Prairie vole	MODERN SPECIES	108														Kcna3 (ENSMOCG00000014038) #20	Kcna2 (ENSMOCG00000000647) #21	Kcna10 (ENSMOCG00000000544) #22	Cym (ENSMOCG00000009895) #23	Prok1 (ENSMOCG00000011072) #24	Lamtor5 (ENSMOCG00000018496) #25	Slc16a4 (ENSMOCG00000000077) #26	Rbm15 (ENSMOCG00000013142) #27	Kcnc4 (ENSMOCG00000006100) #28	Slc6a17 (ENSMOCG00000011733) #29	Ubl4b (ENSMOCG00000002739) #30	Alx3 (ENSMOCG00000015516) #31	Strip1 (ENSMOCG00000000074) #32	Ahcyl1 (ENSMOCG00000016681) #33	Csf1 (ENSMOCG00000008003) #34	ENSMOCG00000012304	Eps8l3 (ENSMOCG00000012496) #35	Gstm5 (ENSMOCG00000020155) #36
Cricetinae	ANCESTRAL SPECIES	12	ENSGT00390000010711 #8	ENSGT00940000162223 #9	ENSGT00390000001017 #11	ENSGT00940000154557.c.a.d.a.b #12	ENSGT00940000154557.c.a.c #12	ENSGT00940000154557.c.a.d.a.a #12	ENSGT00940000154557.c.a.d.b #12	ENSGT00950000182931.A #15	ENSGT00950000183117.a.b #16	ENSGT01030000234578.B.b #17	ENSGT00390000017353 #18	ENSGT00940000159669 #19	ENSGT00940000163100.b	ENSGT00940000160210 #20	ENSGT00940000158688 #21	ENSGT00940000159534 #22	ENSGT00940000162710 #23	ENSGT00940000161331 #24	ENSGT00390000006247.tc #25	ENSGT00940000158411 #26	ENSGT00940000158161 #27	ENSGT00940000158860 #28	ENSGT00940000156542 #29	ENSGT00940000163477 #30	ENSGT00940000160669 #31	ENSGT00400000022095.b #32	ENSGT00950000182981.b.f.b #33	ENSGT00390000015805 #34	ENSGT00940000158169 #35	ENSGT00940000157663 #36	ENSGT00940000160258.j.a.a.b #37
Chinese hamster chok1gshd	MODERN SPECIES	66	Wdr77 (ENSCGRG00001002232) #8	Ovgp1 (ENSCGRG00001006238) #9	Pifo (ENSCGRG00001012700) #11	ENSCGRG00001023048 #12	Chia1 (ENSCGRG00001018747) #12	ENSCGRG00001000291 #12	Chil6 (ENSCGRG00001019821) #12	Dennd2d (ENSCGRG00001020875) #15	Cept1 (ENSCGRG00001021638) #16	Dram2 (ENSCGRG00001007944) #17	Lrif1 (ENSCGRG00001018748) #18	Cd53 (ENSCGRG00001007236) #19	Or11i1 (ENSCGRG00001002619)	Kcna3 (ENSCGRG00001010852) #20	Kcna2 (ENSCGRG00001005760) #21	Kcna10 (ENSCGRG00001009678) #22	Cym (ENSCGRG00001013640) #23	Prok1 (ENSCGRG00001000053) #24	Lamtor5 (ENSCGRG00001013019) #25	Slc16a4 (ENSCGRG00001013244) #26	Rbm15 (ENSCGRG00001001004) #27	Kcnc4 (ENSCGRG00001020960) #28	Slc6a17 (ENSCGRG00001022219) #29	Ubl4b (ENSCGRG00001001057) #30	Alx3 (ENSCGRG00001003980) #31	Strip1 (ENSCGRG00001018291) #32	Ahcyl1 (ENSCGRG00001018405) #33	Csf1 (ENSCGRG00001007365) #34	ENSCGRG00001000570 #35	Gstm5 (ENSCGRG00001001494) #36	Gstm6 (ENSCGRG00001018766) #37
Golden Hamster	MODERN SPECIES	681	Atp5pb (ENSMAUG00000014472) #7	Wdr77 (ENSMAUG00000011523) #8	Pifo (ENSMAUG00000012494) #11	ENSMAUG00000014307 #12	Chia1 (ENSMAUG00000000308) #12	ENSMAUG00000006898	ENSMAUG00000008993 #12	Chil6 (ENSMAUG00000019254) #12	Dennd2d (ENSMAUG00000010336) #15	Cept1 (ENSMAUG00000007779) #16	Dram2 (ENSMAUG00000009170) #17	Lrif1 (ENSMAUG00000010612) #18	Cd53 (ENSMAUG00000014056) #19	Kcna3 (ENSMAUG00000015353) #20	Kcna2 (ENSMAUG00000016476) #21	Kcna10 (ENSMAUG00000018039) #22	Cym (ENSMAUG00000018169) #23	ENSMAUG00000006403 #25	Rbm15 (ENSMAUG00000007198) #27	Kcnc4 (ENSMAUG00000007449) #28	Slc6a17 (ENSMAUG00000008441) #29	Ubl4b (ENSMAUG00000018317) #30	Alx3 (ENSMAUG00000013478) #31	Ahcyl1 (ENSMAUG00000013850) #33	Csf1 (ENSMAUG00000019271) #34	Eps8l3 (ENSMAUG00000019752) #35	Gstm5 (ENSMAUG00000002679) #36	ENSMAUG00000008001 #37	Gstm7 (ENSMAUG00000009031)	Gstm6 (ENSMAUG00000012083) #37	ENSMAUG00000013416
Murinae	ANCESTRAL SPECIES	5	ENSGT00940000162223 #9	ENSGT00390000001017 #11	ENSGT00940000154557.c.a.d.a.b #12	ENSGT00940000154557.c.a.c #12	ENSGT00940000154557.c.a.d.a.a #12	ENSGT00940000154557.c.a.d.b #12	ENSGT00950000182931.A #15	ENSGT00950000183117.a.b #16	ENSGT01030000234578.B.b #17	ENSGT00390000017353 #18	ENSGT00940000159669 #19	ENSGT00940000163100.b	ENSGT00940000160210 #20	ENSGT01050000248434	ENSGT00940000158688 #21	ENSGT00940000159534 #22	ENSGT00940000162710 #23	ENSGT00940000161331 #24	ENSGT00390000006247.tc #25	ENSGT00940000158411 #26	ENSGT00940000158161 #27	ENSGT00940000158860 #28	ENSGT00940000156542 #29	ENSGT00940000163477 #30	ENSGT00940000160669 #31	ENSGT00400000022095.b #32	ENSGT00860000136103	ENSGT00950000182981.b.f.b #33	ENSGT00390000015805 #34	ENSGT00940000158169 #35	ENSGT00940000157663 #36
Mus	ANCESTRAL SPECIES	7	ENSGT00940000162223 #9	ENSGT00390000001017 #11	ENSGT00940000154557.c.a.d.a.b #12	ENSGT00940000154557.c.a.c #12	ENSGT00940000154557.c.a.d.a.a #12	ENSGT00940000154557.c.a.d.b #12	ENSGT00950000182931.A #15	ENSGT00950000183117.a.b #16	ENSGT01030000234578.B.b #17	ENSGT00390000017353 #18	ENSGT00940000159669 #19	ENSGT00940000163100.b	ENSGT00940000160210 #20	ENSGT01050000248434	ENSGT00940000158688 #21	ENSGT00940000159534 #22	ENSGT00940000162710 #23	ENSGT00860000136224	ENSGT00940000161331 #24	ENSGT00390000006247.tc #25	ENSGT00940000158411 #26	ENSGT00940000158161 #27	ENSGT00940000158860 #28	ENSGT00940000156542 #29	ENSGT00940000163477 #30	ENSGT00940000160669 #31	ENSGT00400000022095.b #32	ENSGT00860000136103	ENSGT00950000182981.b.f.b #33	ENSGT00390000015805 #34	ENSGT00940000158169 #35
Mus_A	ANCESTRAL SPECIES	9	ENSGT00940000162223 #9	ENSGT00390000001017 #11	ENSGT00940000154557.c.a.d.a.b #12	ENSGT00940000154557.c.a.c #12	ENSGT00940000154557.c.a.d.a.a #12	ENSGT00940000154557.c.a.d.b #12	ENSGT00950000182931.A #15	ENSGT00950000183117.a.b #16	ENSGT01030000234578.B.b #17	ENSGT00390000017353 #18	ENSGT00940000159669 #19	ENSGT00940000163100.b	ENSGT00940000160210 #20	ENSGT01050000248434	ENSGT00940000158688 #21	ENSGT00940000159534 #22	ENSGT00940000162710 #23	ENSGT00860000136224	ENSGT00940000161331 #24	ENSGT00390000006247.tc #25	ENSGT00940000158411 #26	ENSGT00940000158161 #27	ENSGT00940000158860 #28	ENSGT00940000156542 #29	ENSGT00940000163477 #30	ENSGT00940000160669 #31	ENSGT00400000022095.b #32	ENSGT00860000136103	ENSGT00950000182981.b.f.b #33	ENSGT00390000015805 #34	ENSGT00940000158169 #35
Mus_B	ANCESTRAL SPECIES	8	ENSGT00390000001017 #11	ENSGT00940000154557.c.a.d.a.b #12	ENSGT00940000154557.c.a.c #12	ENSGT00940000154557.c.a.d.a.a.c.a #12	ENSGT00940000154557.c.a.d.a.a.d #12	ENSGT00940000154557.c.a.d.b #12	ENSGT00950000182931.A #15	ENSGT00950000183117.a.b #16	ENSGT01030000234578.B.b #17	ENSGT00390000017353 #18	ENSGT00940000159669 #19	ENSGT00940000163100.b	ENSGT00940000160210 #20	ENSGT01050000248434	ENSGT00940000158688 #21	ENSGT00940000159534 #22	ENSGT00940000162710 #23	ENSGT00860000136224	ENSGT00940000161331 #24	ENSGT00390000006247.tc #25	ENSGT00940000158411 #26	ENSGT00940000158161 #27	ENSGT00940000158860 #28	ENSGT00940000156542 #29	ENSGT00940000163477 #30	ENSGT00940000160669 #31	ENSGT00400000022095.b #32	ENSGT00860000136103	ENSGT00950000182981.b.f.b #33	ENSGT00390000015805 #34	ENSGT00940000158169 #35
Mouse	MODERN SPECIES	12	Ovgp1 (ENSMUSG00000074340) #9	Pifo (ENSMUSG00000010136) #11	Chil5 (ENSMUSG00000043873) #12	Chia1 (ENSMUSG00000062778) #12	Chil3 (ENSMUSG00000040809) #12	Chil4 (ENSMUSG00000063779) #12	Chil6 (ENSMUSG00000027902) #12	Dennd2d (ENSMUSG00000027901) #15	Cept1 (ENSMUSG00000040774) #16	Dram2 (ENSMUSG00000027900) #17	Lrif1 (ENSMUSG00000056260) #18	Cd53 (ENSMUSG00000040747) #19	Or11i1 (ENSMUSG00000043529)	Kcna3 (ENSMUSG00000047959) #20	Kcna2 (ENSMUSG00000040724) #21	Kcna10 (ENSMUSG00000042861) #22	Cym (ENSMUSG00000046213) #23	Prok1 (ENSMUSG00000070368) #24	Lamtor5 (ENSMUSG00000087260) #25	Slc16a4 (ENSMUSG00000027896) #26	Rbm15 (ENSMUSG00000048109) #27	Kcnc4 (ENSMUSG00000027895) #28	Slc6a17 (ENSMUSG00000027894) #29	Ubl4b (ENSMUSG00000055891) #30	Alx3 (ENSMUSG00000014603) #31	Strip1 (ENSMUSG00000014601) #32	Ahcyl1 (ENSMUSG00000027893) #33	Csf1 (ENSMUSG00000014599) #34	Eps8l3 (ENSMUSG00000040600) #35	Gstm5 (ENSMUSG00000004032) #36	Gstm7 (ENSMUSG00000004035)
Mus_C	ANCESTRAL SPECIES	6	ENSGT00390000010711 #8	ENSGT00940000162223 #9	ENSGT00390000001017 #11	ENSGT00940000154557.c.a.d.a.b #12	ENSGT00940000154557.c.a.c #12	ENSGT00940000154557.c.a.d.b #12	ENSGT00950000182931.A #15	ENSGT00950000183117.a.b #16	ENSGT01030000234578.B.b #17	ENSGT00390000017353 #18	ENSGT00940000159669 #19	ENSGT00940000163100.b	ENSGT00940000160210 #20	ENSGT01050000248434	ENSGT00940000158688 #21	ENSGT00940000159534 #22	ENSGT00940000162710 #23	ENSGT00860000136224	ENSGT00940000161331 #24	ENSGT00390000006247.tc #25	ENSGT00940000158411 #26	ENSGT00940000158161 #27	ENSGT00940000158860 #28	ENSGT00940000156542 #29	ENSGT00940000163477 #30	ENSGT00940000160669 #31	ENSGT00400000022095.b #32	ENSGT00860000136103	ENSGT00950000182981.b.f.b #33	ENSGT00390000015805 #34	ENSGT00940000158169 #35
Steppe mouse	MODERN SPECIES	2741									Lrif1 (ENSMSIG00000032169) #18	Cd53 (ENSMSIG00000032167) #19	Kcna3 (ENSMSIG00000032166) #20	ENSMSIG00000032165	ENSMSIG00000032164	Kcna2 (ENSMSIG00000032163) #21	ENSMSIG00000032162	Kcna10 (ENSMSIG00000032161) #22	Cym (ENSMSIG00000032160) #23	ENSMSIG00000032159	ENSMSIG00000032158 #24	ENSMSIG00000032157 #25	Slc16a4 (ENSMSIG00000032156) #26	Rbm15 (ENSMSIG00000032155) #27	Kcnc4 (ENSMSIG00000032153) #28	Slc6a17 (ENSMSIG00000032152) #29	ENSMSIG00000032151	Ubl4b (ENSMSIG00000032150) #30	Alx3 (ENSMSIG00000032148) #31	Strip1 (ENSMSIG00000032147) #32
spretus	MODERN SPECIES	12	Atp5pb (MGP_SPRETEiJ_G0026429) #7	Wdr77 (MGP_SPRETEiJ_G0026430) #8	Ovgp1 (MGP_SPRETEiJ_G0026431) #9	Pifo (MGP_SPRETEiJ_G0026432) #11	Chil5 (MGP_SPRETEiJ_G0026433) #12	Chia1 (MGP_SPRETEiJ_G0026434) #12	Chil6 (MGP_SPRETEiJ_G0026436) #12	Dennd2d (MGP_SPRETEiJ_G0026437) #15	Cept1 (MGP_SPRETEiJ_G0026438) #16	Dram2 (MGP_SPRETEiJ_G0026439) #17	Lrif1 (MGP_SPRETEiJ_G0026440) #18	Cd53 (MGP_SPRETEiJ_G0026441) #19	Or11i1 (MGP_SPRETEiJ_G0026442)	Kcna3 (MGP_SPRETEiJ_G0026443) #20	Kcna2 (MGP_SPRETEiJ_G0026444) #21	Kcna10 (MGP_SPRETEiJ_G0026445) #22	Cym (MGP_SPRETEiJ_G0026446) #23	MGP_SPRETEiJ_G0026447	Prok1 (MGP_SPRETEiJ_G0026448) #24	Lamtor5 (MGP_SPRETEiJ_G0026449) #25	Slc16a4 (MGP_SPRETEiJ_G0026450) #26	Rbm15 (MGP_SPRETEiJ_G0026451) #27	Kcnc4 (MGP_SPRETEiJ_G0026452) #28	Slc6a17 (MGP_SPRETEiJ_G0026453) #29	Ubl4b (MGP_SPRETEiJ_G0026454) #30	Alx3 (MGP_SPRETEiJ_G0026455) #31	Strip1 (MGP_SPRETEiJ_G0026456) #32	MGP_SPRETEiJ_G0026457	Ahcyl1 (MGP_SPRETEiJ_G0026458) #33	Csf1 (MGP_SPRETEiJ_G0026459) #34	Eps8l3 (MGP_SPRETEiJ_G0026460) #35
Ryukyu mouse	MODERN SPECIES	12	Atp5pb (MGP_CAROLIEiJ_G0025480) #7	Wdr77 (MGP_CAROLIEiJ_G0025481) #8	Ovgp1 (MGP_CAROLIEiJ_G0025482) #9	Pifo (MGP_CAROLIEiJ_G0025483) #11	Chil5 (MGP_CAROLIEiJ_G0025484) #12	Chia1 (MGP_CAROLIEiJ_G0025485) #12	Chil6 (MGP_CAROLIEiJ_G0025486) #12	Dennd2d (MGP_CAROLIEiJ_G0025487) #15	Cept1 (MGP_CAROLIEiJ_G0025488) #16	Dram2 (MGP_CAROLIEiJ_G0025489) #17	Lrif1 (MGP_CAROLIEiJ_G0025490) #18	Cd53 (MGP_CAROLIEiJ_G0025491) #19	Or11i1 (MGP_CAROLIEiJ_G0025492)	Kcna3 (MGP_CAROLIEiJ_G0025493) #20	Kcna2 (MGP_CAROLIEiJ_G0025494) #21	Kcna10 (MGP_CAROLIEiJ_G0025495) #22	Cym (MGP_CAROLIEiJ_G0025496) #23	MGP_CAROLIEiJ_G0025497	Prok1 (MGP_CAROLIEiJ_G0025498) #24	MGP_CAROLIEiJ_G0025499 #25	Slc16a4 (MGP_CAROLIEiJ_G0025500) #26	Rbm15 (MGP_CAROLIEiJ_G0025501) #27	Kcnc4 (MGP_CAROLIEiJ_G0025502) #28	Slc6a17 (MGP_CAROLIEiJ_G0025503) #29	Ubl4b (MGP_CAROLIEiJ_G0025504) #30	Alx3 (MGP_CAROLIEiJ_G0025505) #31	Strip1 (MGP_CAROLIEiJ_G0025506) #32	MGP_CAROLIEiJ_G0025507	Ahcyl1 (MGP_CAROLIEiJ_G0025508) #33	Csf1 (MGP_CAROLIEiJ_G0025509) #34	Eps8l3 (MGP_CAROLIEiJ_G0025510) #35
Shrew mouse	MODERN SPECIES	17	Atp5pb (MGP_PahariEiJ_G0026925) #7	Wdr77 (MGP_PahariEiJ_G0026926) #8	Ovgp1 (MGP_PahariEiJ_G0026927) #9	Pifo (MGP_PahariEiJ_G0026928) #11	Chil5 (MGP_PahariEiJ_G0026929) #12	Chia1 (MGP_PahariEiJ_G0026930) #12	Chil6 (MGP_PahariEiJ_G0026932) #12	Dennd2d (MGP_PahariEiJ_G0026933) #15	Cept1 (MGP_PahariEiJ_G0026934) #16	Dram2 (MGP_PahariEiJ_G0026935) #17	Lrif1 (MGP_PahariEiJ_G0026936) #18	Cd53 (MGP_PahariEiJ_G0026937) #19	Or11i1 (MGP_PahariEiJ_G0026938)	Kcna3 (MGP_PahariEiJ_G0026939) #20	Kcna2 (MGP_PahariEiJ_G0026940) #21	Kcna10 (MGP_PahariEiJ_G0026941) #22	Cym (MGP_PahariEiJ_G0026942) #23	MGP_PahariEiJ_G0026943	Prok1 (MGP_PahariEiJ_G0026944) #24	Lamtor5 (MGP_PahariEiJ_G0026945) #25	Slc16a4 (MGP_PahariEiJ_G0026946) #26	Rbm15 (MGP_PahariEiJ_G0026947) #27	Kcnc4 (MGP_PahariEiJ_G0026948) #28	Slc6a17 (MGP_PahariEiJ_G0026949) #29	Ubl4b (MGP_PahariEiJ_G0026950) #30	Alx3 (MGP_PahariEiJ_G0026951) #31	Strip1 (MGP_PahariEiJ_G0026952) #32	MGP_PahariEiJ_G0026953	Ahcyl1 (MGP_PahariEiJ_G0026954) #33	Csf1 (MGP_PahariEiJ_G0026955) #34	Eps8l3 (MGP_PahariEiJ_G0026956) #35
Rat	MODERN SPECIES	11	Prdx1l1 (ENSRNOG00000017695)	Chia (ENSRNOG00000033162) #12	ENSRNOG00000067768 #12	Chi3l3 (ENSRNOG00000037115) #12	RGD1309110 (ENSRNOG00000017574) #12	ENSRNOG00000065668	Dennd2d (ENSRNOG00000017680) #15	Cept1 (ENSRNOG00000017723) #16	Dram2 (ENSRNOG00000017744) #17	Lrif1 (ENSRNOG00000017784) #18	Cd53 (ENSRNOG00000017874) #19	Or11i1 (ENSRNOG00000018112)	Kcna3 (ENSRNOG00000062002) #20	AC113635.2 (ENSRNOG00000056335)	Kcna2 (ENSRNOG00000018285) #21	Kcna10 (ENSRNOG00000050416) #22	Cym (ENSRNOG00000018236) #23	Prok1 (ENSRNOG00000018201) #24	Lamtor5 (ENSRNOG00000018186) #25	Slc16a4 (ENSRNOG00000018131) #26	Rbm15 (ENSRNOG00000047499) #27	Ndufa3-ps3 (ENSRNOG00000050514)	Kcnc4 (ENSRNOG00000060988) #28	Slc6a17 (ENSRNOG00000050090) #29	Ubl4b (ENSRNOG00000070136) #30	Alx3 (ENSRNOG00000018290) #31	Strip1 (ENSRNOG00000018293) #32	ENSRNOG00000067526	Ahcyl1 (ENSRNOG00000018569) #33	Csf1 (ENSRNOG00000018659) #34	Eps8l3 (ENSRNOG00000048209) #35
Upper Galilee mountains blind mole rat	MODERN SPECIES	1527							Pifo (ENSNGAG00000012076) #11	Chia1 (ENSNGAG00000017179) #12	Dennd2d (ENSNGAG00000000363) #15	Cept1 (ENSNGAG00000015379) #16	Dram2 (ENSNGAG00000000133) #17	Lrif1 (ENSNGAG00000013682) #18	Cd53 (ENSNGAG00000014385) #19	Kcna3 (ENSNGAG00000015199) #20	Kcna2 (ENSNGAG00000016191) #21	Kcna10 (ENSNGAG00000014622) #22	Cym (ENSNGAG00000017409) #23	Prok1 (ENSNGAG00000020932) #24	ENSNGAG00000001729 #25	Slc16a4 (ENSNGAG00000006546) #26	Rbm15 (ENSNGAG00000011394) #27	Kcnc4 (ENSNGAG00000012036) #28	Slc6a17 (ENSNGAG00000014539) #29	Alx3 (ENSNGAG00000020991) #31	Strip1 (ENSNGAG00000000280) #32	Ahcyl1 (ENSNGAG00000016809) #33	ENSNGAG00000007019 #34	ENSNGAG00000008387 #35	Gstm5 (ENSNGAG00000009358) #36	ENSNGAG00000010428	Gstm7 (ENSNGAG00000011772)
Lesser Egyptian jerboa	MODERN SPECIES	69	Adora3 (ENSJJAG00000018221)	Tmigd3 (ENSJJAG00000011089)	I830077J02Rik (ENSJJAG00000018125)	ENSJJAG00000021163 #7	Wdr77 (ENSJJAG00000012937) #8	Ovgp1 (ENSJJAG00000019837) #9	Pifo (ENSJJAG00000002457) #11	ENSJJAG00000000819 #12	Dennd2d (ENSJJAG00000014786) #15	Cept1 (ENSJJAG00000022688) #16	Dram2 (ENSJJAG00000013859) #17	Lrif1 (ENSJJAG00000015203) #18	Cd53 (ENSJJAG00000023451) #19	Kcna3 (ENSJJAG00000010102) #20	Kcna2 (ENSJJAG00000010046) #21	Kcna10 (ENSJJAG00000003562) #22	Cym (ENSJJAG00000006178) #23	Prok1 (ENSJJAG00000024291) #24	ENSJJAG00000018623 #25	Slc16a4 (ENSJJAG00000004880) #26	Rbm15 (ENSJJAG00000021795) #27	Kcnc4 (ENSJJAG00000022184) #28	Slc6a17 (ENSJJAG00000000242) #29	Alx3 (ENSJJAG00000017392) #31	Strip1 (ENSJJAG00000011836) #32	Ahcyl1 (ENSJJAG00000017132) #33	ENSJJAG00000021808 #34	ENSJJAG00000022854 #35	Gstm5 (ENSJJAG00000014315) #36	Gstm7 (ENSJJAG00000015165)	ENSJJAG00000010910 #37
Laurasiatheria	ANCESTRAL SPECIES		ENSGT00390000010711 #8	ENSGT00940000162223 #9	ENSGT00940000163644	ENSGT00390000001017 #11	ENSGT00940000154557.c.a #12	ENSGT00940000165936	ENSGT00940000163351 #14	ENSGT00950000182931.A #15	ENSGT00950000183117.a.b #16	ENSGT01030000234578.B.b #17	ENSGT00390000017353 #18	ENSGT00940000159669 #19	ENSGT00940000163100.b	ENSGT00940000160210 #20	ENSGT00940000158688 #21	ENSGT00940000159534 #22	ENSGT00940000162710 #23	ENSGT00940000161331 #24	ENSGT00390000006247 #25	ENSGT00940000158411 #26	ENSGT00940000158161 #27	ENSGT00940000158860 #28	ENSGT00940000156542 #29	ENSGT00940000163477 #30	ENSGT00940000160669 #31	ENSGT00400000022095.b #32	ENSGT00950000182981.b.f.b #33	ENSGT00390000015805 #34	ENSGT00940000158169 #35	ENSGT00940000157663 #36	ENSGT00940000155416.a.a
Eulipotyphla	ANCESTRAL SPECIES																	ENSGT00940000159534 #22
Common shrew	DUPLICATION
Common shrew	MODERN SPECIES	8353																ENSSARG00000000110 #22
Common shrew	MODERN SPECIES	12683																ENSSARG00000007390 #22
Laurasiatheria_a	ANCESTRAL SPECIES		ENSGT00390000010711 #8	ENSGT00940000162223 #9	ENSGT00940000163644	ENSGT00390000001017 #11	ENSGT00940000154557.c.a #12	ENSGT00940000165936	ENSGT00940000163351 #14	ENSGT00950000182931.A #15	ENSGT00950000183117.a.b #16	ENSGT01030000234578.B.b #17	ENSGT00390000017353 #18	ENSGT00940000159669 #19	ENSGT00940000163100.b	ENSGT00940000160210 #20	ENSGT00940000158688 #21	ENSGT00940000159534 #22	ENSGT00940000162710 #23	ENSGT00940000161331 #24	ENSGT00390000006247 #25	ENSGT00940000158411 #26	ENSGT00940000158161 #27	ENSGT00940000158860 #28	ENSGT00940000156542 #29	ENSGT00940000163477 #30	ENSGT00940000160669 #31	ENSGT00400000022095.b #32	ENSGT00950000182981.b.f.b #33	ENSGT00390000015805 #34	ENSGT00940000153525.g.a	ENSGT00940000158169 #35	ENSGT00940000157663 #36
Artiodactyla	ANCESTRAL SPECIES		ENSGT00940000162223 #9	ENSGT00940000163644	ENSGT00940000162989.c	ENSGT00390000001017 #11	ENSGT00940000154557.c.a #12	ENSGT00940000165936	ENSGT00940000163351 #14	ENSGT00950000182931.A #15	ENSGT00950000183117.a.b #16	ENSGT01030000234578.B.b #17	ENSGT00390000017353 #18	ENSGT00940000159669 #19	ENSGT00940000163100.b	ENSGT00940000160210 #20	ENSGT00940000158688 #21	ENSGT00940000159534 #22	ENSGT00940000162710 #23	ENSGT00940000161331 #24	ENSGT00390000006247 #25	ENSGT00940000158411 #26	ENSGT00940000158161 #27	ENSGT00940000158860 #28	ENSGT00940000156542 #29	ENSGT00940000163477 #30	ENSGT00940000160669 #31	ENSGT00400000022095.b #32	ENSGT00950000182981.b.f.b #33	ENSGT00390000015805 #34	ENSGT00940000153525.g.a	ENSGT00940000158169 #35	ENSGT00940000157663 #36
Suina	ANCESTRAL SPECIES	32	ENSGT00940000162223 #9	ENSGT00940000163644	ENSGT00390000001017.i #11	ENSGT00940000162989.c	ENSGT00390000001017.j #11	ENSGT00940000154557.c.a #12	ENSGT00940000163351 #14	ENSGT00950000182931.A #15	ENSGT00950000183117.a.b #16	ENSGT01030000234578.B.b #17	ENSGT00390000017353 #18	ENSGT00940000159669 #19	ENSGT00940000163100.b	ENSGT00940000160210 #20	ENSGT00940000158688 #21	ENSGT00940000159534 #22	ENSGT00940000162710 #23	ENSGT00940000161331 #24	ENSGT00390000006247 #25	ENSGT00940000158411 #26	ENSGT00940000158161 #27	ENSGT00940000158860 #28	ENSGT00940000156542 #29	ENSGT00940000163477 #30	ENSGT00940000160669 #31	ENSGT00400000022095.b #32	ENSGT00950000182981.b.f.b #33	ENSGT00390000015805 #34	ENSGT00940000153525.g.a	ENSGT00940000158169 #35	ENSGT00940000157663 #36
Chacoan peccary	MODERN SPECIES	215	OVGP1 (ENSCWAG00000000271) #9	ENSCWAG00000000302	ENSCWAG00000000390 #11	ENSCWAG00000000477	ENSCWAG00000000866 #11	CHIA (ENSCWAG00000000901) #12	CHI3L2 (ENSCWAG00000000969) #14	DENND2D (ENSCWAG00000001068) #15	CEPT1 (ENSCWAG00000001158) #16	DRAM2 (ENSCWAG00000001183) #17	LRIF1 (ENSCWAG00000001206) #18	CD53 (ENSCWAG00000001223) #19	ENSCWAG00000001239	KCNA3 (ENSCWAG00000001251) #20	KCNA2 (ENSCWAG00000001261) #21	KCNA10 (ENSCWAG00000001270) #22	PROK1 (ENSCWAG00000001276) #24	LAMTOR5 (ENSCWAG00000001297) #25	SLC16A4 (ENSCWAG00000001378) #26	RBM15 (ENSCWAG00000001648) #27	KCNC4 (ENSCWAG00000001672) #28	SLC6A17 (ENSCWAG00000001680) #29	UBL4B (ENSCWAG00000001699) #30	ALX3 (ENSCWAG00000001706) #31	STRIP1 (ENSCWAG00000001724) #32	AHCYL1 (ENSCWAG00000001745) #33	CSF1 (ENSCWAG00000001791) #34	EPS8L3 (ENSCWAG00000001870) #35	GSTM3 (ENSCWAG00000001951) #36	GSTM4 (ENSCWAG00000001996)	AMPD2 (ENSCWAG00000002058)
Pig	MODERN SPECIES	12	PGB (ENSSSCG00000006792)	ENSSSCG00000057886 #11	ENSSSCG00000039977 #11	CHIA (ENSSSCG00000023706) #12	CHI3L2 (ENSSSCG00000006796) #14	ENSSSCG00000051040	DENND2D (ENSSSCG00000025704) #15	CEPT1 (ENSSSCG00000029918) #16	DRAM2 (ENSSSCG00000026922) #17	ENSSSCG00000049472	LRIF1 (ENSSSCG00000006799) #18	CD53 (ENSSSCG00000006800) #19	ENSSSCG00000006801	KCNA3 (ENSSSCG00000006802) #20	KCNA2 (ENSSSCG00000037709) #21	KCNA10 (ENSSSCG00000006803) #22	ENSSSCG00000006804 #23	PROK1 (ENSSSCG00000056682) #24	LAMTOR5 (ENSSSCG00000040889) #25	SLC16A4 (ENSSSCG00000006808) #26	RBM15 (ENSSSCG00000006809) #27	KCNC4 (ENSSSCG00000006810) #28	SLC6A17 (ENSSSCG00000006811) #29	ENSSSCG00000028425 #30	ALX3 (ENSSSCG00000006812) #31	STRIP1 (ENSSSCG00000006813) #32	AHCYL1 (ENSSSCG00000006816) #33	CSF1 (ENSSSCG00000037449) #34	ENSSSCG00000041122	EPS8L3 (ENSSSCG00000006820) #35	GSTM3 (ENSSSCG00000006821) #36
Artiodactyla_a	ANCESTRAL SPECIES		ENSGT00940000162223 #9	ENSGT00940000163644	ENSGT00940000162989.c	ENSGT00390000001017 #11	ENSGT00940000154557.c.a #12	ENSGT00940000165936	ENSGT00940000163351 #14	ENSGT00950000182931.A #15	ENSGT00950000183117.a.b #16	ENSGT01030000234578.B.b #17	ENSGT00390000017353 #18	ENSGT00940000159669 #19	ENSGT00940000163100.b	ENSGT00940000160210 #20	ENSGT00940000158688 #21	ENSGT00940000159534 #22	ENSGT00940000162710 #23	ENSGT00940000161331 #24	ENSGT00390000006247 #25	ENSGT00940000158411 #26	ENSGT00940000158161 #27	ENSGT00940000158860 #28	ENSGT00940000156542 #29	ENSGT00940000163477 #30	ENSGT00940000160669 #31	ENSGT00400000022095.b #32	ENSGT00950000182981.b.f.b #33	ENSGT00390000015805 #34	ENSGT00940000153525.g.a	ENSGT00940000158169 #35	ENSGT00940000157663 #36
Artiodactyla_b	ANCESTRAL SPECIES		ENSGT00940000163644	ENSGT00390000001017.k #11	ENSGT00940000162989.c	ENSGT00390000001017.l #11	ENSGT00940000154557.c.a #12	ENSGT00940000165936	ENSGT00940000163351 #14	ENSGT00950000182931.A #15	ENSGT00950000183117.a.b #16	ENSGT01030000234578.B.b #17	ENSGT00390000017353 #18	ENSGT00940000159669 #19	ENSGT00940000163100.b	ENSGT00940000160210 #20	ENSGT00940000158688 #21	ENSGT00940000159534 #22	ENSGT00940000162710 #23	ENSGT00940000161331 #24	ENSGT00390000006247 #25	ENSGT00940000158411 #26	ENSGT00940000158161 #27	ENSGT00940000158860 #28	ENSGT00940000156542 #29	ENSGT00940000163477 #30	ENSGT00940000160669 #31	ENSGT00400000022095.b #32	ENSGT00950000182981.b.f.b #33	ENSGT00390000015805 #34	ENSGT00940000153525.g.a	ENSGT00940000158169 #35	ENSGT00940000157663 #36
Cetacea	ANCESTRAL SPECIES		ENSGT00390000010711 #8	ENSGT00940000162223 #9	ENSGT00390000001017.k #11	ENSGT00940000162989.c	ENSGT00390000001017.l #11	ENSGT00940000154557.c.a #12	ENSGT00940000165936	ENSGT00940000163351 #14	ENSGT00950000182931.A #15	ENSGT00950000183117.a.b #16	ENSGT01030000234578.B.b #17	ENSGT00390000017353 #18	ENSGT00940000159669 #19	ENSGT00940000160210 #20	ENSGT00940000158688 #21	ENSGT00940000159534 #22	ENSGT00940000162710 #23	ENSGT00940000161331 #24	ENSGT00390000006247 #25	ENSGT00940000158411 #26	ENSGT00940000158161 #27	ENSGT00940000158860 #28	ENSGT00940000156542 #29	ENSGT00940000163477 #30	ENSGT00940000160669 #31	ENSGT00400000022095.b #32	ENSGT00950000182981.b.f.b #33	ENSGT00390000015805 #34	ENSGT00940000153525.g.a	ENSGT00940000158169 #35	ENSGT00940000157663 #36
Odontoceti	ANCESTRAL SPECIES		ENSGT00390000010711 #8	ENSGT00940000162223 #9	ENSGT00390000001017.k #11	ENSGT00940000162989.c	ENSGT00390000001017.l #11	ENSGT00940000154557.c.a #12	ENSGT00940000165936	ENSGT00940000163351 #14	ENSGT00950000182931.A #15	ENSGT00950000183117.a.b #16	ENSGT01030000234578.B.b #17	ENSGT00390000017353 #18	ENSGT00940000159669 #19	ENSGT00940000160210 #20	ENSGT00940000158688 #21	ENSGT00940000159534 #22	ENSGT00940000162710 #23	ENSGT00940000161331 #24	ENSGT00390000006247 #25	ENSGT00940000158411 #26	ENSGT00940000158161 #27	ENSGT00940000158860 #28	ENSGT00940000156542 #29	ENSGT00940000163477 #30	ENSGT00940000160669 #31	ENSGT00400000022095.b #32	ENSGT00950000182981.b.f.b #33	ENSGT00390000015805 #34	ENSGT00940000158169 #35	ENSGT00940000157663 #36	ENSGT00940000154679.yb.a.b
Odontoceti_a	ANCESTRAL SPECIES		ENSGT00390000010711 #8	ENSGT00940000162223 #9	ENSGT00390000001017.k #11	ENSGT00940000162989.c	ENSGT00390000001017.l #11	ENSGT00940000154557.c.a #12	ENSGT00940000165936	ENSGT00940000163351 #14	ENSGT00950000182931.A #15	ENSGT00950000183117.a.b #16	ENSGT01030000234578.B.b #17	ENSGT00390000017353 #18	ENSGT00940000159669 #19	ENSGT00940000160210 #20	ENSGT00940000158688 #21	ENSGT00940000159534 #22	ENSGT00940000162710 #23	ENSGT00940000161331 #24	ENSGT00390000006247 #25	ENSGT00940000158411 #26	ENSGT00940000158161 #27	ENSGT00940000158860 #28	ENSGT00940000156542 #29	ENSGT00940000163477 #30	ENSGT00940000160669 #31	ENSGT00400000022095.b #32	ENSGT00950000182981.b.f.b #33	ENSGT00390000015805 #34	ENSGT00940000158169 #35	ENSGT00940000157663 #36	ENSGT00940000154679.yb.a.b
Odontoceti_b	ANCESTRAL SPECIES		ENSGT00390000010711 #8	ENSGT00940000162223 #9	ENSGT00390000001017.k #11	ENSGT00940000162989.c	ENSGT00390000001017.l #11	ENSGT00940000154557.c.a #12	ENSGT00940000165936	ENSGT00950000182931.A #15	ENSGT00950000183117.a.b #16	ENSGT01030000234578.B.b #17	ENSGT00390000017353 #18	ENSGT00940000159669 #19	ENSGT00390000010799.u.b.a.a.b	ENSGT00940000160210 #20	ENSGT00940000158688 #21	ENSGT00940000159534 #22	ENSGT00940000162710 #23	ENSGT00940000161331 #24	ENSGT00390000006247 #25	ENSGT00940000158411 #26	ENSGT00940000158161 #27	ENSGT00940000158860 #28	ENSGT00940000156542 #29	ENSGT00940000163477 #30	ENSGT00940000160669 #31	ENSGT00400000022095.b #32	ENSGT00950000182981.b.f.b #33	ENSGT00390000015805 #34	ENSGT00940000158169 #35	ENSGT00940000157663 #36	ENSGT00940000154679.yb.a.b
Monodontidae	ANCESTRAL SPECIES		ENSGT00390000015005	ENSGT00390000001958.n.a.h #7	ENSGT00390000010711.g #8	ENSGT00390000001017.l #11	ENSGT00940000154557.c.a #12	ENSGT00940000165936	ENSGT00950000182931.A #15	ENSGT00950000183117.a.b #16	ENSGT01030000234578.B.b #17	ENSGT00390000017353 #18	ENSGT01000000220950	ENSGT00940000159669 #19	ENSGT00390000010799.u.b.a.a.b	ENSGT00940000160210 #20	ENSGT00940000158688 #21	ENSGT00940000159534 #22	ENSGT00940000162710 #23	ENSGT00940000161331 #24	ENSGT00390000006247 #25	ENSGT00940000158411 #26	ENSGT00940000158161 #27	ENSGT00940000158860 #28	ENSGT00940000156542 #29	ENSGT00990000211988	ENSGT00940000160669 #31	ENSGT00400000022095.b #32	ENSGT00950000182981.b.f.b #33	ENSGT00390000015805 #34	ENSGT00940000158169 #35	ENSGT00940000157663 #36	ENSGT00940000154679.yb.a.b
Beluga whale	MODERN SPECIES	74	ENSDLEG00000014857 #11	ENSDLEG00000014836 #11	CHIA (ENSDLEG00000014820) #12	ENSDLEG00000014689	DENND2D (ENSDLEG00000014651) #15	CEPT1 (ENSDLEG00000014634) #16	DRAM2 (ENSDLEG00000014572) #17	LRIF1 (ENSDLEG00000014561) #18	ENSDLEG00000014543	ENSDLEG00000014526	CD53 (ENSDLEG00000014517) #19	ENSDLEG00000014510	ENSDLEG00000014507	KCNA3 (ENSDLEG00000014503) #20	KCNA2 (ENSDLEG00000014502) #21	KCNA10 (ENSDLEG00000014495) #22	ENSDLEG00000013799 #23	PROK1 (ENSDLEG00000013725) #24	LAMTOR5 (ENSDLEG00000013717) #25	SLC16A4 (ENSDLEG00000013705) #26	RBM15 (ENSDLEG00000013698) #27	KCNC4 (ENSDLEG00000013678) #28	SLC6A17 (ENSDLEG00000013620) #29	ENSDLEG00000013610	ALX3 (ENSDLEG00000013594) #31	STRIP1 (ENSDLEG00000013580) #32	AHCYL1 (ENSDLEG00000016107) #33	CSF1 (ENSDLEG00000016091) #34	EPS8L3 (ENSDLEG00000016052) #35	GSTM3 (ENSDLEG00000016036) #36	GSTM4 (ENSDLEG00000015283)
Narwhal	MODERN SPECIES	304	C1orf162 (ENSMMNG00015017580)	ATP5PB (ENSMMNG00015017619) #7	WDR77 (ENSMMNG00015017655) #8	PIFO (ENSMMNG00015017677) #11	CHIA (ENSMMNG00015017712) #12	ENSMMNG00015017870	DENND2D (ENSMMNG00015018341) #15	CEPT1 (ENSMMNG00015018402) #16	DRAM2 (ENSMMNG00015018445) #17	LRIF1 (ENSMMNG00015018473) #18	ENSMMNG00015018491	CD53 (ENSMMNG00015018504) #19	ENSMMNG00015018526	KCNA3 (ENSMMNG00015018543) #20	KCNA2 (ENSMMNG00015018564) #21	KCNA10 (ENSMMNG00015018586) #22	ENSMMNG00015018705 #23	PROK1 (ENSMMNG00015019054) #24	LAMTOR5 (ENSMMNG00015019087) #25	SLC16A4 (ENSMMNG00015019185) #26	RBM15 (ENSMMNG00015019328) #27	KCNC4 (ENSMMNG00015019370) #28	SLC6A17 (ENSMMNG00015019494) #29	ALX3 (ENSMMNG00015019542) #31	STRIP1 (ENSMMNG00015019566) #32	AHCYL1 (ENSMMNG00015019604) #33	CSF1 (ENSMMNG00015019657) #34	EPS8L3 (ENSMMNG00015019704) #35	GSTM3 (ENSMMNG00015019828) #36	GSTM4 (ENSMMNG00015019952)	ENSMMNG00015020252
Dolphin	MODERN SPECIES	3826																KCNA10 (ENSTTRG00000009817) #22
Sperm whale	MODERN SPECIES	692																KCNA10 (ENSPCTG00005018373) #22
Blue whale	MODERN SPECIES		WDR77 (ENSBMSG00010008752) #8	OVGP1 (ENSBMSG00010008731) #9	ENSBMSG00010008706 #11	ENSBMSG00010008693	ENSBMSG00010008672	ENSBMSG00010008660 #11	CHIA (ENSBMSG00010008641) #12	ENSBMSG00010008572	DENND2D (ENSBMSG00010008496) #15	CEPT1 (ENSBMSG00010008459) #16	DRAM2 (ENSBMSG00010008440) #17	LRIF1 (ENSBMSG00010008429) #18	CD53 (ENSBMSG00010008411) #19	KCNA3 (ENSBMSG00010008395) #20	KCNA2 (ENSBMSG00010008384) #21	KCNA10 (ENSBMSG00010008377) #22	ENSBMSG00010008319 #23	PROK1 (ENSBMSG00010008280) #24	LAMTOR5 (ENSBMSG00010008260) #25	SLC16A4 (ENSBMSG00010008140) #26	RBM15 (ENSBMSG00010008103) #27	ENSBMSG00010008095	KCNC4 (ENSBMSG00010008085) #28	SLC6A17 (ENSBMSG00010008070) #29	UBL4B (ENSBMSG00010008061) #30	ALX3 (ENSBMSG00010008054) #31	STRIP1 (ENSBMSG00010008007) #32	AHCYL1 (ENSBMSG00010007982) #33	CSF1 (ENSBMSG00010007970) #34	ENSBMSG00010007961	EPS8L3 (ENSBMSG00010007907) #35
Pecora	ANCESTRAL SPECIES	2	ENSGT00390000001017.k #11	ENSGT00940000162223.b #9	ENSGT00940000162989.c	ENSGT00390000001017.l #11	ENSGT00940000154557.c.a #12	ENSGT00940000165936	ENSGT00940000163351 #14	ENSGT00950000182931.A #15	ENSGT00950000183117.a.b #16	ENSGT01030000234578.B.b #17	ENSGT00390000017353 #18	ENSGT00940000159669 #19	ENSGT00940000163100.b	ENSGT00940000160210 #20	ENSGT00940000158688 #21	ENSGT00940000159534 #22	ENSGT00940000162710 #23	ENSGT00940000161331 #24	ENSGT00390000006247.f #25	ENSGT00940000158411 #26	ENSGT00940000158161 #27	ENSGT00940000158860 #28	ENSGT00940000156542 #29	ENSGT00940000163477 #30	ENSGT00940000160669 #31	ENSGT00400000022095.b #32	ENSGT00950000182981.b.f.b #33	ENSGT00390000015805 #34	ENSGT00940000158169 #35	ENSGT00940000157663 #36	ENSGT00940000154679.yb.a.a.a
Yarkand deer	MODERN SPECIES	12	ENSCHYG00000008388 #11	ENSCHYG00000008426 #9	ENSCHYG00000008629	ENSCHYG00000010693 #11	CHIA (ENSCHYG00000010860) #12	ENSCHYG00000011001	CHI3L2 (ENSCHYG00000011034) #14	DENND2D (ENSCHYG00000011291) #15	CEPT1 (ENSCHYG00000011445) #16	DRAM2 (ENSCHYG00000011556) #17	ENSCHYG00000011636 #18	CD53 (ENSCHYG00000011827) #19	ENSCHYG00000011890	KCNA3 (ENSCHYG00000011946) #20	KCNA2 (ENSCHYG00000011991) #21	KCNA10 (ENSCHYG00000012029) #22	ENSCHYG00000012048 #23	PROK1 (ENSCHYG00000012093) #24	LAMTOR5 (ENSCHYG00000012127) #25	SLC16A4 (ENSCHYG00000012250) #26	RBM15 (ENSCHYG00000012338) #27	KCNC4 (ENSCHYG00000012388) #28	SLC6A17 (ENSCHYG00000012514) #29	UBL4B (ENSCHYG00000012600) #30	ALX3 (ENSCHYG00000012616) #31	STRIP1 (ENSCHYG00000012666) #32	AHCYL1 (ENSCHYG00000012894) #33	ENSCHYG00000013071	CSF1 (ENSCHYG00000013124) #34	EPS8L3 (ENSCHYG00000013368) #35	GSTM3 (ENSCHYG00000013610) #36
Percora_a	ANCESTRAL SPECIES	1	ENSGT00390000001017.k #11	ENSGT00940000162223.b #9	ENSGT00940000162989.c	ENSGT00390000001017.l #11	ENSGT00940000154557.c.a #12	ENSGT00940000165936	ENSGT00940000163351 #14	ENSGT00950000182931.A #15	ENSGT00950000183117.a.b #16	ENSGT01030000234578.B.b #17	ENSGT00390000017353 #18	ENSGT00940000159669 #19	ENSGT00940000163100.b	ENSGT00940000160210 #20	ENSGT00940000158688 #21	ENSGT00940000159534 #22	ENSGT00940000162710 #23	ENSGT00940000161331 #24	ENSGT00390000006247.f #25	ENSGT00940000158411 #26	ENSGT00940000158161 #27	ENSGT00940000158860 #28	ENSGT00940000156542 #29	ENSGT00940000163477 #30	ENSGT00940000160669 #31	ENSGT00400000022095.b #32	ENSGT00950000182981.b.f.b #33	ENSGT00390000015805 #34	ENSGT00940000158169 #35	ENSGT00940000157663 #36	ENSGT00940000154679.yb.a.a.a
Bovidae	ANCESTRAL SPECIES	1	ENSGT00390000001017.k #11	ENSGT00940000162223.b #9	ENSGT00940000181698	ENSGT00940000162989.c	ENSGT00390000001017.l #11	ENSGT00940000154557.c.a #12	ENSGT00940000163351 #14	ENSGT00950000182931.A #15	ENSGT00950000183117.a.b #16	ENSGT01030000234578.B.b #17	ENSGT00390000017353 #18	ENSGT00940000159669 #19	ENSGT00940000163100.b	ENSGT00940000160210 #20	ENSGT00940000158688 #21	ENSGT00940000159534 #22	ENSGT00940000162710 #23	ENSGT00940000161331 #24	ENSGT00390000006247.f #25	ENSGT00940000158411 #26	ENSGT00940000158161 #27	ENSGT00940000158860 #28	ENSGT00940000156542 #29	ENSGT00940000163477 #30	ENSGT00940000160669 #31	ENSGT00400000022095.b #32	ENSGT00950000182981.b.f.b #33	ENSGT00390000015805 #34	ENSGT00940000158169 #35	ENSGT00940000157663 #36	ENSGT00940000154679.yb.a.a.a
Bovinae	ANCESTRAL SPECIES	1	ENSGT00940000162223.b #9	ENSGT00940000181698	ENSGT00940000162989.c	ENSGT00390000001017.l #11	ENSGT00940000154557.d ##12	ENSGT00960000190270	ENSGT00940000154557.c.a #12	ENSGT00940000163351 #14	ENSGT00950000182931.A #15	ENSGT00950000183117.a.b #16	ENSGT01030000234578.B.b #17	ENSGT00390000017353 #18	ENSGT00940000159669 #19	ENSGT00940000160210 #20	ENSGT00940000158688 #21	ENSGT00940000159534 #22	ENSGT00940000162710 #23	ENSGT00940000161331 #24	ENSGT00390000006247.f #25	ENSGT00940000158411 #26	ENSGT00940000158161 #27	ENSGT00940000158860 #28	ENSGT00940000156542 #29	ENSGT00940000163477 #30	ENSGT00940000160669 #31	ENSGT00400000022095.b #32	ENSGT00950000182981.b.f.b #33	ENSGT00390000015805 #34	ENSGT00940000158169 #35	ENSGT00940000157663 #36	ENSGT00940000154679.yb.a.a.a
Bos	ANCESTRAL SPECIES		ENSGT00940000162223.b #9	ENSGT00940000181698	ENSGT00940000162989.c	ENSGT00390000001017.l #11	ENSGT00940000154557.d ##12	ENSGT00960000190270	ENSGT00940000154557.c.a #12	ENSGT00940000163351 #14	ENSGT00950000182931.A #15	ENSGT00950000183117.a.b #16	ENSGT01030000234578.B.b.j #17	ENSGT00390000017353 #18	ENSGT00940000159669 #19	ENSGT00940000160210 #20	ENSGT00940000158688 #21	ENSGT00940000159534 #22	ENSGT00940000162710 #23	ENSGT00940000161331 #24	ENSGT00390000006247.f #25	ENSGT00940000158411 #26	ENSGT00940000158161 #27	ENSGT00940000158860 #28	ENSGT00940000156542 #29	ENSGT00940000163477 #30	ENSGT00940000160669 #31	ENSGT00400000022095.b #32	ENSGT00950000182981.b.f.b #33	ENSGT00390000015805 #34	ENSGT00940000158169 #35	ENSGT00940000157663 #36	ENSGT00940000154679.yb.b
Bos_a	ANCESTRAL SPECIES	32	ENSGT00940000162223.b #9	ENSGT00940000181698	ENSGT00940000162989.c	ENSGT00390000001017.l #11	ENSGT00940000154557.d ##12	ENSGT00960000190270	ENSGT00940000154557.c.a #12	ENSGT00940000163351 #14	ENSGT00950000182931.A #15	ENSGT00950000183117.a.b #16	ENSGT01030000234578.B.b.j #17	ENSGT00390000017353 #18	ENSGT00940000159669 #19	ENSGT00940000160210 #20	ENSGT00940000158688 #21	ENSGT00940000159534 #22	ENSGT00940000162710 #23	ENSGT00940000161331 #24	ENSGT00390000006247.f #25	ENSGT00940000158411 #26	ENSGT00940000158161 #27	ENSGT00940000158860 #28	ENSGT00940000156542 #29	ENSGT00940000163477 #30	ENSGT00940000160669 #31	ENSGT00400000022095.b #32	ENSGT00950000182981.b.f.b #33	ENSGT00390000015805 #34	ENSGT00940000158169 #35	ENSGT00940000157663 #36	ENSGT00940000154679.yb.b
Domestic yak	MODERN SPECIES	22	WDR77 (ENSBGRG00000003894) #8	ENSBGRG00000003845 #11	OVGP1 (ENSBGRG00000003565) #9	ENSBGRG00000003517	ENSBGRG00000003449 #11	ENSBGRG00000003424 ##12	CHIA (ENSBGRG00000003406) #12	CHI3L2 (ENSBGRG00000003371) #14	DENND2D (ENSBGRG00000003306) #15	CEPT1 (ENSBGRG00000003271) #16	DRAM2 (ENSBGRG00000003249) #17	LRIF1 (ENSBGRG00000003232) #18	CD53 (ENSBGRG00000003195) #19	KCNA3 (ENSBGRG00000003175) #20	KCNA2 (ENSBGRG00000003166) #21	KCNA10 (ENSBGRG00000003158) #22	ENSBGRG00000003129 #23	PROK1 (ENSBGRG00000003096) #24	LAMTOR5 (ENSBGRG00000003056) #25	SLC16A4 (ENSBGRG00000003007) #26	RBM15 (ENSBGRG00000002938) #27	KCNC4 (ENSBGRG00000002862) #28	SLC6A17 (ENSBGRG00000002816) #29	UBL4B (ENSBGRG00000002794) #30	ALX3 (ENSBGRG00000002756) #31	STRIP1 (ENSBGRG00000002535) #32	AHCYL1 (ENSBGRG00000002429) #33	CSF1 (ENSBGRG00000002310) #34	EPS8L3 (ENSBGRG00000002149) #35	GSTM3 (ENSBGRG00000002112) #36	ENSBGRG00000002079
Wild yak	MODERN SPECIES	398												LRIF1 (ENSBMUG00000002593) #18	CD53 (ENSBMUG00000002615) #19	ENSBMUG00000002634 #20	KCNA2 (ENSBMUG00000002654) #21	KCNA10 (ENSBMUG00000002666) #22	ENSBMUG00000002812 #23	PROK1 (ENSBMUG00000002854) #24	LAMTOR5 (ENSBMUG00000002882) #25	SLC16A4 (ENSBMUG00000002898) #26	RBM15 (ENSBMUG00000002917) #27	KCNC4 (ENSBMUG00000002947) #28	SLC6A17 (ENSBMUG00000002960) #29	UBL4B (ENSBMUG00000002997) #30	ALX3 (ENSBMUG00000003015) #31	STRIP1 (ENSBMUG00000003045) #32	AHCYL1 (ENSBMUG00000003072) #33	CSF1 (ENSBMUG00000003110) #34	EPS8L3 (ENSBMUG00000003194) #35	GSTM3 (ENSBMUG00000003237) #36	GSTM4 (ENSBMUG00000003445)
Bos_b	ANCESTRAL SPECIES	1	ENSGT00940000162223.b #9	ENSGT00940000181698	ENSGT00940000162989.c	ENSGT00390000001017.l #11	ENSGT00960000190270	ENSGT00940000154557.c.a #12	ENSGT00940000163351 #14	ENSGT00970000196959	ENSGT00950000182931.A #15	ENSGT00950000183117.a.b #16	ENSGT01030000234578.B.b.j #17	ENSGT00390000017353 #18	ENSGT00940000159669 #19	ENSGT00940000160210 #20	ENSGT00940000158688 #21	ENSGT00940000159534 #22	ENSGT00940000162710 #23	ENSGT00940000161331 #24	ENSGT00390000006247.f #25	ENSGT00940000158411 #26	ENSGT00940000158161 #27	ENSGT00940000158860 #28	ENSGT00940000156542 #29	ENSGT00940000163477 #30	ENSGT00940000160669 #31	ENSGT00400000022095.b #32	ENSGT00950000182981.b.f.b #33	ENSGT00390000015805 #34	ENSGT00940000158169 #35	ENSGT00940000157663 #36	ENSGT00940000154679.yb.a.b
Cow	MODERN SPECIES	22	ENSBTAG00000023535	ENSBTAG00000050402 #11	ENSBTAG00000048596	CHIA (ENSBTAG00000000259) #12	CHI3L2 (ENSBTAG00000013578) #14	DENND2D (ENSBTAG00000020172) #15	ENSBTAG00000050725	CEPT1 (ENSBTAG00000020169) #16	ENSBTAG00000050534	DRAM2 (ENSBTAG00000009888) #17	LRIF1 (ENSBTAG00000012659) #18	ENSBTAG00000053209	CD53 (ENSBTAG00000006466) #19	KCNA3 (ENSBTAG00000047879) #20	KCNA2 (ENSBTAG00000015459) #21	KCNA10 (ENSBTAG00000008322) #22	CYM (ENSBTAG00000010565) #23	PROK1 (ENSBTAG00000010560) #24	LAMTOR5 (ENSBTAG00000014970) #25	SLC16A4 (ENSBTAG00000015380) #26	RBM15 (ENSBTAG00000012555) #27	KCNC4 (ENSBTAG00000007352) #28	SLC6A17 (ENSBTAG00000001981) #29	UBL4B (ENSBTAG00000016389) #30	ALX3 (ENSBTAG00000020966) #31	STRIP1 (ENSBTAG00000020964) #32	AHCYL1 (ENSBTAG00000018893) #33	CSF1 (ENSBTAG00000000283) #34	EPS8L3 (ENSBTAG00000001845) #35	GSTM3 (ENSBTAG00000001842) #36	GSTM1 (ENSBTAG00000017765)
Hybrid Bos Indicus	MODERN SPECIES	22	OVGP1 (ENSBIXG00005016174) #9	ENSBIXG00005016051 #11	ENSBIXG00005016026	ENSBIXG00005002542	ENSBIXG00005015938 #11	CHIA (ENSBIXG00005002493) #12	CHI3L2 (ENSBIXG00005002472) #14	ENSBIXG00005015738	DENND2D (ENSBIXG00005015719) #15	CEPT1 (ENSBIXG00005002434) #16	ENSBIXG00005015623 #17	LRIF1 (ENSBIXG00005006749) #18	CD53 (ENSBIXG00005015567) #19	ENSBIXG00005015551	KCNA3 (ENSBIXG00005007547) #20	KCNA10 (ENSBIXG00005015503) #22	ENSBIXG00005015422 #23	PROK1 (ENSBIXG00005015015) #24	LAMTOR5 (ENSBIXG00005014997) #25	SLC16A4 (ENSBIXG00005002188) #26	RBM15 (ENSBIXG00005014920) #27	KCNC4 (ENSBIXG00005014882) #28	SLC6A17 (ENSBIXG00005002125) #29	UBL4B (ENSBIXG00005014793) #30	ALX3 (ENSBIXG00005007753) #31	STRIP1 (ENSBIXG00005014763) #32	AHCYL1 (ENSBIXG00005014680) #33	CSF1 (ENSBIXG00005014594) #34	EPS8L3 (ENSBIXG00005001977) #35	GSTM3 (ENSBIXG00005014462) #36	GSTM5 (ENSBIXG00005014396)
American bison	MODERN SPECIES	3366	ENSBBBG00000001651 #11	ENSBBBG00000009858 #9	ENSBBBG00000009825	ENSBBBG00000009818	ENSBBBG00000009796 #11	ENSBBBG00000009779	CHIA (ENSBBBG00000009767) #12	CHI3L2 (ENSBBBG00000009747) #14	DENND2D (ENSBBBG00000009721) #15	CEPT1 (ENSBBBG00000009702) #16	DRAM2 (ENSBBBG00000007298) #17	LRIF1 (ENSBBBG00000009681) #18	CD53 (ENSBBBG00000001571) #19	KCNA3 (ENSBBBG00000009640) #20	KCNA2 (ENSBBBG00000009636) #21	KCNA10 (ENSBBBG00000009632) #22	ENSBBBG00000009596 #23	PROK1 (ENSBBBG00000009503) #24	ENSBBBG00000009497 #25	SLC16A4 (ENSBBBG00000009481) #26	RBM15 (ENSBBBG00000009478) #27	KCNC4 (ENSBBBG00000009475) #28	SLC6A17 (ENSBBBG00000009473) #29	UBL4B (ENSBBBG00000009462) #30	ALX3 (ENSBBBG00000009459) #31	STRIP1 (ENSBBBG00000001513) #32	AHCYL1 (ENSBBBG00000009438) #33	CSF1 (ENSBBBG00000009429) #34	EPS8L3 (ENSBBBG00000009425) #35	GSTM3 (ENSBBBG00000009421) #36	ENSBBBG00000001491
Caprinae	ANCESTRAL SPECIES	2	ENSGT00390000001017.k #11	ENSGT00940000162223.a.b #9	ENSGT00940000181698	ENSGT00940000162989.c	ENSGT00390000001017.l #11	ENSGT00940000154557.c.a #12	ENSGT00940000163351 #14	ENSGT00950000182931.A #15	ENSGT00950000183117.a.b #16	ENSGT01030000234578.B.b #17	ENSGT00390000017353 #18	ENSGT00940000159669 #19	ENSGT00940000163100.b	ENSGT00940000160210 #20	ENSGT00940000158688 #21	ENSGT00940000159534 #22	ENSGT00940000162710 #23	ENSGT00940000161331 #24	ENSGT00390000006247.f #25	ENSGT00940000158411 #26	ENSGT00940000158161 #27	ENSGT00940000158860 #28	ENSGT00940000156542 #29	ENSGT00940000163477 #30	ENSGT00940000160669 #31	ENSGT00400000022095.b #32	ENSGT00950000182981.b.f.b #33	ENSGT00390000015805 #34	ENSGT00940000158169 #35	ENSGT00940000157663 #36	ENSGT00940000154679.yb.a.a.a
Rambouillet Sheep	MODERN SPECIES		ENSOARG00020011829 #11	ENSOARG00020011762 #11	ENSOARG00020011625 #9	ENSOARG00020011028	ENSOARG00020010749 #11	CHIA (ENSOARG00020010631) #12	CHI3L2 (ENSOARG00020010337) #14	DENND2D (ENSOARG00020009993) #15	CEPT1 (ENSOARG00020009826) #16	DRAM2 (ENSOARG00020009677) #17	LRIF1 (ENSOARG00020009640) #18	CD53 (ENSOARG00020009555) #19	ENSOARG00020009541	KCNA3 (ENSOARG00020009524) #20	KCNA2 (ENSOARG00020009491) #21	KCNA10 (ENSOARG00020009472) #22	CYM (ENSOARG00020009427) #23	PROK1 (ENSOARG00020009397) #24	LAMTOR5 (ENSOARG00020009324) #25	SLC16A4 (ENSOARG00020009239) #26	RBM15 (ENSOARG00020009185) #27	KCNC4 (ENSOARG00020009100) #28	SLC6A17 (ENSOARG00020008988) #29	ENSOARG00020008958 #30	ALX3 (ENSOARG00020008884) #31	STRIP1 (ENSOARG00020008832) #32	AHCYL1 (ENSOARG00020008688) #33	CSF1 (ENSOARG00020008481) #34	EPS8L3 (ENSOARG00020008395) #35	GSTM3 (ENSOARG00020008341) #36	ENSOARG00020008285
Goat	MODERN SPECIES	22	ENSCHIG00000008928 #11	ENSCHIG00000020754 #9	ENSCHIG00000013140	ENSCHIG00000024796	ENSCHIG00000025701 #11	CHIA (ENSCHIG00000021761) #12	CHI3L2 (ENSCHIG00000012064) #14	DENND2D (ENSCHIG00000010038) #15	CEPT1 (ENSCHIG00000022947) #16	DRAM2 (ENSCHIG00000026871) #17	LRIF1 (ENSCHIG00000022218) #18	CD53 (ENSCHIG00000014145) #19	ENSCHIG00000020554	KCNA3 (ENSCHIG00000008192) #20	KCNA2 (ENSCHIG00000011516) #21	KCNA10 (ENSCHIG00000010455) #22	CYM (ENSCHIG00000022669) #23	PROK1 (ENSCHIG00000007934) #24	ENSCHIG00000017249 #25	SLC16A4 (ENSCHIG00000025177) #26	RBM15 (ENSCHIG00000026774) #27	KCNC4 (ENSCHIG00000022646) #28	SLC6A17 (ENSCHIG00000021595) #29	ALX3 (ENSCHIG00000026078) #31	STRIP1 (ENSCHIG00000012301) #32	AHCYL1 (ENSCHIG00000023186) #33	CSF1 (ENSCHIG00000027124) #34	EPS8L3 (ENSCHIG00000019749) #35	GSTM3 (ENSCHIG00000009359) #36	ENSCHIG00000010819	ENSCHIG00000024688
Siberian musk deer	MODERN SPECIES	98	ENSMMSG00000008505 #11	ENSMMSG00000008385 #9	ENSMMSG00000007971	ENSMMSG00000007840 #11	CHIA (ENSMMSG00000007723) #12	ENSMMSG00000007648	CHI3L2 (ENSMMSG00000007485) #14	DENND2D (ENSMMSG00000007399) #15	CEPT1 (ENSMMSG00000007354) #16	DRAM2 (ENSMMSG00000007321) #17	LRIF1 (ENSMMSG00000007300) #18	CD53 (ENSMMSG00000007254) #19	ENSMMSG00000006466	KCNA3 (ENSMMSG00000006450) #20	KCNA2 (ENSMMSG00000006426) #21	KCNA10 (ENSMMSG00000006413) #22	ENSMMSG00000005565 #23	PROK1 (ENSMMSG00000005466) #24	LAMTOR5 (ENSMMSG00000005377) #25	SLC16A4 (ENSMMSG00000005085) #26	RBM15 (ENSMMSG00000005006) #27	KCNC4 (ENSMMSG00000004976) #28	SLC6A17 (ENSMMSG00000004883) #29	ALX3 (ENSMMSG00000004822) #31	STRIP1 (ENSMMSG00000004733) #32	AHCYL1 (ENSMMSG00000004586) #33	CSF1 (ENSMMSG00000004480) #34	EPS8L3 (ENSMMSG00000004378) #35	GSTM3 (ENSMMSG00000004329) #36	ENSMMSG00000004316	ENSMMSG00000004308
Camelidae	ANCESTRAL SPECIES	29	ENSGT00930000151073	ENSGT00390000015005	ENSGT00390000001958.o #7	ENSGT00390000010711 #8	ENSGT00940000162223 #9	ENSGT00390000001017 #11	ENSGT00940000154557.c.a #12	ENSGT00950000182931.A #15	ENSGT00950000183117.a.b #16	ENSGT01030000234578.B.b #17	ENSGT00390000017353 #18	ENSGT00940000159669 #19	ENSGT00940000163100.b	ENSGT00940000160210 #20	ENSGT00940000158688 #21	ENSGT00940000159534 #22	ENSGT00940000162710 #23	ENSGT00940000161331 #24	ENSGT00390000006247 #25	ENSGT00940000158411 #26	ENSGT00940000158161 #27	ENSGT00940000158860 #28	ENSGT00940000156542 #29	ENSGT00940000163477 #30	ENSGT00940000160669 #31	ENSGT00400000022095.b #32	ENSGT00950000182981.b.f.b #33	ENSGT00390000015805 #34	ENSGT00940000158169 #35	ENSGT00940000157663 #36	ENSGT00940000154679.`c.a.a
Arabian camel	MODERN SPECIES	35	C1orf162 (ENSCDRG00005000936)	ENSCDRG00005000969 #7	WDR77 (ENSCDRG00005001004) #8	ENSCDRG00005001051 #9	PIFO (ENSCDRG00005001125) #11	CHIA (ENSCDRG00005001168) #12	DENND2D (ENSCDRG00005001214) #15	ENSCDRG00005001260 #16	ENSCDRG00005001285 #17	LRIF1 (ENSCDRG00005001302) #18	CD53 (ENSCDRG00005001319) #19	ENSCDRG00005001336	ENSCDRG00005001345	KCNA3 (ENSCDRG00005001356) #20	KCNA2 (ENSCDRG00005001380) #21	KCNA10 (ENSCDRG00005001393) #22	CYM (ENSCDRG00005001417) #23	PROK1 (ENSCDRG00005001446) #24	LAMTOR5 (ENSCDRG00005001467) #25	SLC16A4 (ENSCDRG00005001515) #26	RBM15 (ENSCDRG00005001599) #27	KCNC4 (ENSCDRG00005001635) #28	SLC6A17 (ENSCDRG00005001666) #29	ENSCDRG00005001693 #30	ALX3 (ENSCDRG00005001710) #31	STRIP1 (ENSCDRG00005001732) #32	AHCYL1 (ENSCDRG00005001769) #33	CSF1 (ENSCDRG00005001805) #34	ENSCDRG00005001858	EPS8L3 (ENSCDRG00005001879) #35	GSTM3 (ENSCDRG00005001984) #36
Laurasiatheria_b	ANCESTRAL SPECIES		ENSGT00390000010711 #8	ENSGT00940000162223 #9	ENSGT00940000163644	ENSGT00390000001017 #11	ENSGT00940000154557.c.b #13	ENSGT00940000165936	ENSGT00940000154557.c.a #12	ENSGT00950000182931.A #15	ENSGT00950000183117.a.b #16	ENSGT01030000234578.B.b #17	ENSGT00390000017353 #18	ENSGT00940000159669 #19	ENSGT00940000163100.b	ENSGT00940000160210 #20	ENSGT00940000158688 #21	ENSGT00940000159534 #22	ENSGT00940000162710 #23	ENSGT00940000161331 #24	ENSGT00390000006247 #25	ENSGT00940000158411 #26	ENSGT00940000158161 #27	ENSGT00940000158860 #28	ENSGT00940000156542 #29	ENSGT00940000163477 #30	ENSGT00940000160669 #31	ENSGT00400000022095.b #32	ENSGT00950000182981.b.f.b #33	ENSGT00390000015805 #34	ENSGT00940000153525.g.a	ENSGT00940000158169 #35	ENSGT00940000157663 #36
Carnivora	ANCESTRAL SPECIES	1	ENSGT00390000001958 #7	ENSGT00390000010711 #8	ENSGT00940000162223 #9	ENSGT00940000163644.g.a	ENSGT00940000163644.g.b	ENSGT00390000001017 #11	ENSGT00940000154557.c.a #12	ENSGT00950000182931.A #15	ENSGT00950000183117.a.b #16	ENSGT01030000234578.B.b #17	ENSGT00390000017353 #18	ENSGT00940000159669 #19	ENSGT00940000163100.b	ENSGT00940000160210 #20	ENSGT00940000158688 #21	ENSGT00940000159534 #22	ENSGT00940000162710 #23	ENSGT00940000161331 #24	ENSGT00390000006247 #25	ENSGT00940000158411 #26	ENSGT00940000158161 #27	ENSGT00940000158860 #28	ENSGT00940000156542 #29	ENSGT00940000163477 #30	ENSGT00940000160669 #31	ENSGT00400000022095.b #32	ENSGT00950000182981.b.f.b #33	ENSGT00390000015805 #34	ENSGT00940000153525.g.a	ENSGT00940000158169 #35	ENSGT00940000157663 #36
Caniformia	ANCESTRAL SPECIES	2	ENSGT00390000001958 #7	ENSGT00390000010711 #8	ENSGT00940000162223 #9	ENSGT00940000163644.g.a	ENSGT00940000163644.g.b	ENSGT00390000001017 #11	ENSGT00940000154557.c.a #12	ENSGT00950000182931.A #15	ENSGT00950000183117.a.b #16	ENSGT01030000234578.B.b #17	ENSGT00390000017353 #18	ENSGT00940000159669 #19	ENSGT00940000163100.b	ENSGT00940000160210 #20	ENSGT00940000158688 #21	ENSGT00940000159534 #22	ENSGT00940000162710 #23	ENSGT00940000161331 #24	ENSGT00390000006247 #25	ENSGT00940000158411 #26	ENSGT00940000158161 #27	ENSGT00940000158860 #28	ENSGT00940000156542 #29	ENSGT00940000163477 #30	ENSGT00940000160669 #31	ENSGT00400000022095.b #32	ENSGT00950000182981.b.f.b #33	ENSGT00390000015805 #34	ENSGT00940000153525.g.a	ENSGT00940000158169 #35	ENSGT00940000157663 #36
Canidae	ANCESTRAL SPECIES	18	ENSGT00940000162223 #9	ENSGT00940000163644.g.a	ENSGT00390000001017.h #11	ENSGT00940000163644.g.b	ENSGT00390000001017.g #11	ENSGT00940000154557.c.a #12	ENSGT00950000182931.A #15	ENSGT00950000183117.a.b #16	ENSGT01030000234578.B.b #17	ENSGT00390000017353 #18	ENSGT00940000159669 #19	ENSGT00940000163100.b	ENSGT00940000164892	ENSGT00940000160210 #20	ENSGT00940000158688 #21	ENSGT00940000159534 #22	ENSGT00940000162710 #23	ENSGT00940000161331 #24	ENSGT00390000006247 #25	ENSGT00940000158411 #26	ENSGT00940000158161 #27	ENSGT00940000158860 #28	ENSGT00940000156542 #29	ENSGT00940000163477 #30	ENSGT00940000160669 #31	ENSGT00400000022095.b #32	ENSGT00950000182981.b.f.b #33	ENSGT00390000015805 #34	ENSGT00940000158169 #35	ENSGT00940000157663 #36	ENSGT00940000154679
Canis_lupus	ANCESTRAL SPECIES	2	ENSGT00390000001958.f #7	ENSGT00390000010711.j #8	ENSGT00940000163644.g.a.b	ENSGT00940000163644.g.b	ENSGT00390000001017.g #11	ENSGT00940000154557.c.a #12	ENSGT00950000182931.A #15	ENSGT00950000183117.a.b #16	ENSGT01030000234578.B.b #17	ENSGT00390000017353 #18	ENSGT00940000159669 #19	ENSGT00940000163100.b	ENSGT00940000164892	ENSGT00940000160210 #20	ENSGT00940000158688 #21	ENSGT00940000159534 #22	ENSGT00940000162710 #23	ENSGT00940000161331 #24	ENSGT00390000006247 #25	ENSGT00940000158411 #26	ENSGT00940000158161 #27	ENSGT00940000158860 #28	ENSGT00940000156542 #29	ENSGT00940000163477 #30	ENSGT00940000160669 #31	ENSGT00400000022095.b #32	ENSGT00950000182981.b.f.b #33	ENSGT00390000015805 #34	ENSGT00940000158169 #35	ENSGT00940000157663 #36	ENSGT00940000154679.cc
Dog	MODERN SPECIES	34	PGB1 (ENSCAFG00845001440)	ENSCAFG00845001497	ENSCAFG00845001520 #11	CHIA (ENSCAFG00845001561) #12	DENND2D (ENSCAFG00845001602) #15	CEPT1 (ENSCAFG00845001667) #16	DRAM2 (ENSCAFG00845001721) #17	LRIF1 (ENSCAFG00845001755) #18	CD53 (ENSCAFG00845001785) #19	OR11I1 (ENSCAFG00845001800)	MED4 (ENSCAFG00845001813)	ENSCAFG00845001847	ENSCAFG00845001865	ENSCAFG00845001875 #20	KCNA2 (ENSCAFG00845001930) #21	KCNA10 (ENSCAFG00845001958) #22	ENSCAFG00845001991 #23	PROK1 (ENSCAFG00845002024) #24	ENSCAFG00845002037 #25	SLC16A4 (ENSCAFG00845002060) #26	RBM15 (ENSCAFG00845002095) #27	KCNC4 (ENSCAFG00845002142) #28	SLC6A17 (ENSCAFG00845002172) #29	ALX3 (ENSCAFG00845002188) #31	UBL4B (ENSCAFG00845002207) #30	STRIP1 (ENSCAFG00845002247) #32	AHCYL1 (ENSCAFG00845002325) #33	CSF1 (ENSCAFG00845002371) #34	EPS8L3 (ENSCAFG00845002452) #35	ENSCAFG00845002524 #36	ENSCAFG00845002572
Dingo	MODERN SPECIES	172	ENSCAFG00020009433	ENSCAFG00020009467	ENSCAFG00020009479 #11	CHIA (ENSCAFG00020009486) #12	DENND2D (ENSCAFG00020009529) #15	CEPT1 (ENSCAFG00020009537) #16	DRAM2 (ENSCAFG00020009546) #17	LRIF1 (ENSCAFG00020009548) #18	CD53 (ENSCAFG00020009553) #19	ENSCAFG00020009557	ENSCAFG00020009561	ENSCAFG00020009562	ENSCAFG00020009564	KCNA3 (ENSCAFG00020009583) #20	KCNA2 (ENSCAFG00020009585) #21	KCNA10 (ENSCAFG00020009589) #22	ENSCAFG00020009591 #23	PROK1 (ENSCAFG00020009598) #24	ENSCAFG00020009601 #25	SLC16A4 (ENSCAFG00020009610) #26	RBM15 (ENSCAFG00020009671) #27	KCNC4 (ENSCAFG00020009675) #28	SLC6A17 (ENSCAFG00020009693) #29	UBL4B (ENSCAFG00020009735) #30	ALX3 (ENSCAFG00020009745) #31	STRIP1 (ENSCAFG00020009755) #32	AHCYL1 (ENSCAFG00020009768) #33	CSF1 (ENSCAFG00020009785) #34	EPS8L3 (ENSCAFG00020009795) #35	GSTM3 (ENSCAFG00020009825) #36	ENSCAFG00020009873
Red fox	MODERN SPECIES	21	LRRC74A (ENSVVUG00000003174)	ANGEL1 (ENSVVUG00000003153)	VASH1 (ENSVVUG00000003148)	ENSVVUG00000003144	ENSVVUG00000003136	ESRRB (ENSVVUG00000003087)	GPATCH2L (ENSVVUG00000003062)	LRIF1 (ENSVVUG00000003052) #18	ENSVVUG00000003042	CD53 (ENSVVUG00000003032) #19	ENSVVUG00000003028	ENSVVUG00000003016	ENSVVUG00000003008	KCNA3 (ENSVVUG00000002996) #20	KCNA2 (ENSVVUG00000002990) #21	KCNA10 (ENSVVUG00000002985) #22	ENSVVUG00000002965 #23	PROK1 (ENSVVUG00000002954) #24	ENSVVUG00000002945 #25	SLC16A4 (ENSVVUG00000002937) #26	RBM15 (ENSVVUG00000002929) #27	KCNC4 (ENSVVUG00000002897) #28	SLC6A17 (ENSVVUG00000002886) #29	ENSVVUG00000002883 #30	ALX3 (ENSVVUG00000002882) #31	STRIP1 (ENSVVUG00000002869) #32	AHCYL1 (ENSVVUG00000002850) #33	CSF1 (ENSVVUG00000002842) #34	EPS8L3 (ENSVVUG00000002831) #35	GSTM3 (ENSVVUG00000002825) #36	GSTM4 (ENSVVUG00000002806)
Caniformia_b	ANCESTRAL SPECIES	1	ENSGT00390000001958 #7	ENSGT00390000010711 #8	ENSGT00940000162223 #9	ENSGT00940000163644.g.a	ENSGT00940000163644.g.b	ENSGT00390000001017 #11	ENSGT00940000154557.c.a #12	ENSGT00950000182931.A #15	ENSGT00950000183117.a.b #16	ENSGT01030000234578.B.b #17	ENSGT00390000017353 #18	ENSGT00940000159669 #19	ENSGT00940000163100.b	ENSGT00940000160210 #20	ENSGT00940000158688 #21	ENSGT00940000159534 #22	ENSGT00940000162710 #23	ENSGT00940000161331 #24	ENSGT00390000006247 #25	ENSGT00940000158411 #26	ENSGT00940000158161 #27	ENSGT00940000158860 #28	ENSGT00940000156542 #29	ENSGT00940000163477 #30	ENSGT00940000160669 #31	ENSGT00400000022095.b #32	ENSGT00950000182981.b.f.b #33	ENSGT00390000015805 #34	ENSGT00940000153525.g.a	ENSGT00940000158169 #35	ENSGT00940000157663 #36
Mustelinae	ANCESTRAL SPECIES	47	ENSGT00390000001958 #7	ENSGT00390000010711 #8	ENSGT00940000162223 #9	ENSGT00940000163644.g.a	ENSGT00940000163644.g.b	ENSGT00390000001017 #11	ENSGT00940000154557.c.a #12	ENSGT00950000182931.A #15	ENSGT00950000183117.a.b #16	ENSGT01030000234578.B.b #17	ENSGT00390000017353 #18	ENSGT00940000159669 #19	ENSGT00940000163100.b	ENSGT00940000160210 #20	ENSGT00940000158688 #21	ENSGT00940000159534 #22	ENSGT00940000162710 #23	ENSGT00940000161331 #24	ENSGT00390000006247 #25	ENSGT00940000158411 #26	ENSGT00940000158161 #27	ENSGT00940000158860 #28	ENSGT00940000156542 #29	ENSGT00940000163477 #30	ENSGT00940000160669 #31	ENSGT00400000022095.b #32	ENSGT00950000182981.b.f.b #33	ENSGT00390000015805 #34	ENSGT00940000153525.g.a	ENSGT00940000158169 #35	ENSGT00940000157663 #36
American mink	MODERN SPECIES	450													ENSNVIG00000023229	KCNA3 (ENSNVIG00000023230) #20	KCNA2 (ENSNVIG00000023232) #21	KCNA10 (ENSNVIG00000023234) #22	ENSNVIG00000023235 #23	PROK1 (ENSNVIG00000023250) #24	LAMTOR5 (ENSNVIG00000023253) #25	SLC16A4 (ENSNVIG00000023255) #26	RBM15 (ENSNVIG00000023257) #27	KCNC4 (ENSNVIG00000023264) #28	SLC6A17 (ENSNVIG00000023270) #29	ALX3 (ENSNVIG00000023276) #31	STRIP1 (ENSNVIG00000023283) #32	AHCYL1 (ENSNVIG00000023290) #33	CSF1 (ENSNVIG00000023295) #34	EPS8L3 (ENSNVIG00000023303) #35
Ferret	MODERN SPECIES	312	ENSMPUG00000004336	ENSMPUG00000004330 #11	CHIA (ENSMPUG00000004304) #12	DENND2D (ENSMPUG00000004249) #15	CEPT1 (ENSMPUG00000004240) #16	DRAM2 (ENSMPUG00000004232) #17	ENSMPUG00000004215	ENSMPUG00000004204	ENSMPUG00000018700	LRIF1 (ENSMPUG00000004198) #18	CD53 (ENSMPUG00000004188) #19	ENSMPUG00000018699	KCNA3 (ENSMPUG00000019911) #20	KCNA2 (ENSMPUG00000019908) #21	ENSMPUG00000004182	KCNA10 (ENSMPUG00000019906) #22	ENSMPUG00000003846 #23	PROK1 (ENSMPUG00000003842) #24	LAMTOR5 (ENSMPUG00000003833) #25	SLC16A4 (ENSMPUG00000003825) #26	RBM15 (ENSMPUG00000003822) #27	KCNC4 (ENSMPUG00000003815) #28	SLC6A17 (ENSMPUG00000003802) #29	UBL4B (ENSMPUG00000019903) #30	ALX3 (ENSMPUG00000003781) #31	STRIP1 (ENSMPUG00000003770) #32	AHCYL1 (ENSMPUG00000003763) #33	CSF1 (ENSMPUG00000003759) #34	ENSMPUG00000003740	EPS8L3 (ENSMPUG00000003673) #35	GSTM3 (ENSMPUG00000003667) #36
Ursidae	ANCESTRAL SPECIES	32	ENSGT00390000001958.h #7	ENSGT00390000010711 #8	ENSGT00940000162223 #9	ENSGT00940000163644.g.a	ENSGT00940000163644.g.b	ENSGT00390000001017 #11	ENSGT00940000154557.d ##12	ENSGT00950000182931.A #15	ENSGT00950000183117.a.b #16	ENSGT01030000234578.B.b #17	ENSGT00390000017353 #18	ENSGT00940000159669 #19	ENSGT00940000163100.b	ENSGT00940000160210 #20	ENSGT00940000158688 #21	ENSGT00940000159534 #22	ENSGT00940000162710 #23	ENSGT00940000161331 #24	ENSGT00390000006247 #25	ENSGT00940000158411 #26	ENSGT00940000158161 #27	ENSGT00940000158860 #28	ENSGT00940000156542 #29	ENSGT00940000163477 #30	ENSGT00940000160669 #31	ENSGT00400000022095.b #32	ENSGT00950000182981.b.f.b #33	ENSGT00390000015805 #34	ENSGT00940000158169 #35	ENSGT00940000157663 #36	ENSGT00940000154679
Ursus	ANCESTRAL SPECIES	70	ENSGT00390000001958.h #7	ENSGT00390000010711 #8	ENSGT00940000162223.c #9	ENSGT00940000163644.g.a	ENSGT00940000163644.g.b	ENSGT00390000001017 #11	ENSGT00940000154557.d ##12	ENSGT00950000182931.A #15	ENSGT00950000183117.a.b #16	ENSGT01030000234578.B.b #17	ENSGT00390000017353 #18	ENSGT00940000159669 #19	ENSGT00940000163100.b	ENSGT00940000160210 #20	ENSGT00940000158688 #21	ENSGT00940000159534 #22	ENSGT00940000162710 #23	ENSGT00940000161331 #24	ENSGT00390000006247 #25	ENSGT00940000158411 #26	ENSGT00940000158161 #27	ENSGT00940000158860 #28	ENSGT00940000156542 #29	ENSGT00940000163477 #30	ENSGT00990000211988	ENSGT00940000160669 #31	ENSGT00400000022095.b #32	ENSGT00950000182981.b.f.b #33	ENSGT00390000015805 #34	ENSGT00940000158169 #35	ENSGT00940000157663 #36
Polar bear	MODERN SPECIES	255	WDR77 (ENSUMAG00000013868) #8	ENSUMAG00000013859	ENSUMAG00000013735 #9	ENSUMAG00000013716	ENSUMAG00000013714	PIFO (ENSUMAG00000013709) #11	ENSUMAG00000013706 ##12	DENND2D (ENSUMAG00000013701) #15	CEPT1 (ENSUMAG00000013692) #16	DRAM2 (ENSUMAG00000013687) #17	LRIF1 (ENSUMAG00000013678) #18	CD53 (ENSUMAG00000013675) #19	ENSUMAG00000013674	ENSUMAG00000013666 #20	KCNA2 (ENSUMAG00000013657) #21	KCNA10 (ENSUMAG00000013649) #22	ENSUMAG00000013640 #23	PROK1 (ENSUMAG00000013634) #24	ENSUMAG00000013629 #25	SLC16A4 (ENSUMAG00000013626) #26	RBM15 (ENSUMAG00000013623) #27	KCNC4 (ENSUMAG00000013618) #28	SLC6A17 (ENSUMAG00000013610) #29	ENSUMAG00000013605	ALX3 (ENSUMAG00000013602) #31	STRIP1 (ENSUMAG00000013594) #32	AHCYL1 (ENSUMAG00000013587) #33	CSF1 (ENSUMAG00000013583) #34	ENSUMAG00000013576	EPS8L3 (ENSUMAG00000013537) #35	GSTM3 (ENSUMAG00000013524) #36
American black bear	MODERN SPECIES	9404														KCNA3 (ENSUAMG00000003870) #20	KCNA2 (ENSUAMG00000003873) #21	KCNA10 (ENSUAMG00000003875) #22	ENSUAMG00000003877 #23
Giant Panda	MODERN SPECIES	11	TMIGD3 (ENSAMEG00000005422)	C1orf162 (ENSAMEG00000005430)	ATP5PB (ENSAMEG00000026613) #7	WDR77 (ENSAMEG00000005454) #8	PGB2 (ENSAMEG00000005567)	ENSAMEG00000029447	PIFO (ENSAMEG00000005665) #11	DENND2D (ENSAMEG00000005697) #15	CEPT1 (ENSAMEG00000005727) #16	DRAM2 (ENSAMEG00000005732) #17	LRIF1 (ENSAMEG00000010491) #18	CD53 (ENSAMEG00000010436) #19	ENSAMEG00000019457	KCNA3 (ENSAMEG00000020084) #20	KCNA2 (ENSAMEG00000020085) #21	KCNA10 (ENSAMEG00000011463) #22	ENSAMEG00000011464 #23	PROK1 (ENSAMEG00000011499) #24	LAMTOR5 (ENSAMEG00000029707) #25	SLC16A4 (ENSAMEG00000011510) #26	RBM15 (ENSAMEG00000011540) #27	KCNC4 (ENSAMEG00000005297) #28	SLC6A17 (ENSAMEG00000005229) #29	UBL4B (ENSAMEG00000018980) #30	ALX3 (ENSAMEG00000030907) #31	STRIP1 (ENSAMEG00000005155) #32	AHCYL1 (ENSAMEG00000005099) #33	CSF1 (ENSAMEG00000005086) #34	EPS8L3 (ENSAMEG00000005059) #35	GSTM3 (ENSAMEG00000005027) #36	ENSAMEG00000025154
Felidae	ANCESTRAL SPECIES	10	ENSGT00390000010711 #8	ENSGT00940000162223 #9	ENSGT00940000163644.g.a	ENSGT00940000163644.g.b	ENSGT00390000001017 #11	ENSGT00940000154557.c.a #12	ENSGT00950000182931.A #15	ENSGT00950000183117.a.b #16	ENSGT01030000234578.B.b #17	ENSGT00390000017353 #18	ENSGT00940000159669 #19	ENSGT00510000046985.h.b.a.a.a	ENSGT00940000163100.b	ENSGT00940000160210 #20	ENSGT00940000158688 #21	ENSGT00940000159534 #22	ENSGT00940000162710 #23	ENSGT00940000161331 #24	ENSGT00390000006247 #25	ENSGT00940000158411 #26	ENSGT00940000158161 #27	ENSGT00940000158860 #28	ENSGT00940000156542 #29	ENSGT00940000163477 #30	ENSGT00940000160669 #31	ENSGT00400000022095.b #32	ENSGT00950000182981.b.f.b #33	ENSGT00390000015805 #34	ENSGT00940000158169 #35	ENSGT00940000157663 #36	ENSGT00940000154679
Panthera	ANCESTRAL SPECIES	4	ENSGT00390000010711 #8	ENSGT00940000162223 #9	ENSGT00940000163644.g.a	ENSGT00940000163644.g.b	ENSGT00390000001017 #11	ENSGT00940000154557.c.a #12	ENSGT00950000182931.A #15	ENSGT00950000183117.a.b #16	ENSGT01030000234578.B.b #17	ENSGT00390000017353 #18	ENSGT00940000159669 #19	ENSGT00510000046985.h.b.a.a.a	ENSGT00940000163100.b	ENSGT00940000160210 #20	ENSGT00940000158688 #21	ENSGT00940000159534 #22	ENSGT00940000162710 #23	ENSGT00940000161331 #24	ENSGT00390000006247 #25	ENSGT00940000158411 #26	ENSGT00940000158161 #27	ENSGT00940000158860 #28	ENSGT00940000156542 #29	ENSGT00940000163477 #30	ENSGT00940000160669 #31	ENSGT00400000022095.b #32	ENSGT00950000182981.b.f.b #33	ENSGT00390000015805 #34	ENSGT00940000158169 #35	ENSGT00940000157663 #36	ENSGT00940000154679
Panthera_a	ANCESTRAL SPECIES	11	ENSGT00390000010711 #8	ENSGT00940000162223 #9	ENSGT00940000163644.g.a	ENSGT00940000163644.g.b	ENSGT00390000001017 #11	ENSGT00940000154557.c.a #12	ENSGT00950000182931.A #15	ENSGT00950000183117.a.b #16	ENSGT01030000234578.B.b #17	ENSGT00390000017353 #18	ENSGT00940000159669 #19	ENSGT00510000046985.h.b.a.a.a	ENSGT00940000163100.b	ENSGT00940000160210 #20	ENSGT00940000158688 #21	ENSGT00940000159534 #22	ENSGT00940000162710 #23	ENSGT00940000161331 #24	ENSGT00390000006247 #25	ENSGT00940000158411 #26	ENSGT00940000158161 #27	ENSGT00940000158860 #28	ENSGT00940000156542 #29	ENSGT00940000163477 #30	ENSGT00940000160669 #31	ENSGT00400000022095.b #32	ENSGT00950000182981.b.f.b #33	ENSGT00390000015805 #34	ENSGT00940000158169 #35	ENSGT00940000157663 #36	ENSGT00940000154679
lion	MODERN SPECIES	8	ENSPLOG00000004854	ATP5PB (ENSPLOG00000004879) #7	WDR77 (ENSPLOG00000004899) #8	OVGP1 (ENSPLOG00000004911) #9	ENSPLOG00000004922	CHIA (ENSPLOG00000004941) #12	DENND2D (ENSPLOG00000005053) #15	CEPT1 (ENSPLOG00000005105) #16	DRAM2 (ENSPLOG00000005129) #17	LRIF1 (ENSPLOG00000005144) #18	CD53 (ENSPLOG00000005162) #19	ENSPLOG00000005176	ENSPLOG00000005184	KCNA3 (ENSPLOG00000005189) #20	KCNA2 (ENSPLOG00000005197) #21	KCNA10 (ENSPLOG00000005205) #22	ENSPLOG00000005222 #23	PROK1 (ENSPLOG00000005306) #24	LAMTOR5 (ENSPLOG00000005314) #25	SLC16A4 (ENSPLOG00000005485) #26	RBM15 (ENSPLOG00000005633) #27	KCNC4 (ENSPLOG00000005662) #28	SLC6A17 (ENSPLOG00000005692) #29	UBL4B (ENSPLOG00000005727) #30	ALX3 (ENSPLOG00000005751) #31	STRIP1 (ENSPLOG00000005777) #32	AHCYL1 (ENSPLOG00000005837) #33	CSF1 (ENSPLOG00000005877) #34	EPS8L3 (ENSPLOG00000005921) #35	GSTM3 (ENSPLOG00000006019) #36	GSTM4 (ENSPLOG00000006093)
leopard	MODERN SPECIES	31	WDR77 (ENSPPRG00000002294) #8	OVGP1 (ENSPPRG00000002990) #9	ENSPPRG00000003335	ENSPPRG00000003526	PIFO (ENSPPRG00000004236) #11	CHIA (ENSPPRG00000005241) #12	DENND2D (ENSPPRG00000005693) #15	CEPT1 (ENSPPRG00000006226) #16	DRAM2 (ENSPPRG00000006598) #17	LRIF1 (ENSPPRG00000006730) #18	CD53 (ENSPPRG00000007191) #19	ENSPPRG00000007431	ENSPPRG00000019125	KCNA3 (ENSPPRG00000019159) #20	ENSPPRG00000008940 #21	KCNA10 (ENSPPRG00000009040) #22	ENSPPRG00000009317 #23	PROK1 (ENSPPRG00000009436) #24	ENSPPRG00000010263 #25	SLC16A4 (ENSPPRG00000012383) #26	RBM15 (ENSPPRG00000013347) #27	KCNC4 (ENSPPRG00000015380) #28	SLC6A17 (ENSPPRG00000015720) #29	ALX3 (ENSPPRG00000016165) #31	STRIP1 (ENSPPRG00000017480) #32	AHCYL1 (ENSPPRG00000000140) #33	ENSPPRG00000000931 #34	EPS8L3 (ENSPPRG00000005567) #35	GSTM3 (ENSPPRG00000006748) #36	GSTM4 (ENSPPRG00000007502)	AMPD2 (ENSPPRG00000011959)
Tiger	MODERN SPECIES	81	WDR77 (ENSPTIG00000003575) #8	OVGP1 (ENSPTIG00000005531) #9	ENSPTIG00000007525	PIFO (ENSPTIG00000008395) #11	ENSPTIG00000010240	CHIA (ENSPTIG00000010968) #12	DENND2D (ENSPTIG00000013499) #15	CEPT1 (ENSPTIG00000016166) #16	DRAM2 (ENSPTIG00000019396) #17	LRIF1 (ENSPTIG00000001339) #18	CD53 (ENSPTIG00000002959) #19	ENSPTIG00000003291	ENSPTIG00000003323	KCNA3 (ENSPTIG00000003344) #20	ENSPTIG00000006029 #21	KCNA10 (ENSPTIG00000003390) #22	ENSPTIG00000007150 #23	PROK1 (ENSPTIG00000007287) #24	LAMTOR5 (ENSPTIG00000007633) #25	SLC16A4 (ENSPTIG00000008350) #26	RBM15 (ENSPTIG00000010318) #27	KCNC4 (ENSPTIG00000011696) #28	SLC6A17 (ENSPTIG00000013129) #29	ALX3 (ENSPTIG00000013672) #31	STRIP1 (ENSPTIG00000014458) #32	AHCYL1 (ENSPTIG00000017176) #33	ENSPTIG00000020247 #34	EPS8L3 (ENSPTIG00000021087) #35	GSTM3 (ENSPTIG00000009194) #36	GSTM4 (ENSPTIG00000011402)	AMPD2 (ENSPTIG00000012688)
Cat	MODERN SPECIES	239	ATP5PB (ENSFCAG00000028321) #7	WDR77 (ENSFCAG00000005651) #8	PGB1 (ENSFCAG00000046664)	PGB2 (ENSFCAG00000040956) #9	ENSFCAG00000039867 #11	CHIA (ENSFCAG00000028709) #12	DENND2D (ENSFCAG00000010113) #15	CEPT1 (ENSFCAG00000010111) #16	DRAM2 (ENSFCAG00000010109) #17	LRIF1 (ENSFCAG00000027452) #18	CD53 (ENSFCAG00000007844) #19	ENSFCAG00000028363	ENSFCAG00000022304	KCNA3 (ENSFCAG00000030328) #20	KCNA2 (ENSFCAG00000050059) #21	KCNA10 (ENSFCAG00000007672) #22	CYM (ENSFCAG00000027953) #23	PROK1 (ENSFCAG00000039739) #24	LAMTOR5 (ENSFCAG00000023792) #25	SLC16A4 (ENSFCAG00000007673) #26	RBM15 (ENSFCAG00000028208) #27	KCNC4 (ENSFCAG00000008063) #28	SLC6A17 (ENSFCAG00000005162) #29	ENSFCAG00000048236 #30	ALX3 (ENSFCAG00000030151) #31	STRIP1 (ENSFCAG00000005155) #32	AHCYL1 (ENSFCAG00000005149) #33	CSF1 (ENSFCAG00000010770) #34	EPS8L3 (ENSFCAG00000015600) #35	GSTM3 (ENSFCAG00000015599) #36	GSTM4 (ENSFCAG00000015598)
Laurasiatheria_c	ANCESTRAL SPECIES		ENSGT00390000010711 #8	ENSGT00940000162223 #9	ENSGT00940000163644	ENSGT00390000001017 #11	ENSGT00940000154557.c.b #13	ENSGT00940000165936	ENSGT00940000163351 #14	ENSGT00950000182931.A #15	ENSGT00950000183117.a.b #16	ENSGT01030000234578.B.b #17	ENSGT00390000017353 #18	ENSGT00940000159669 #19	ENSGT00940000163100.b	ENSGT00940000160210 #20	ENSGT00940000158688 #21	ENSGT00940000159534 #22	ENSGT00940000162710 #23	ENSGT00940000161331 #24	ENSGT00390000006247 #25	ENSGT00940000158411 #26	ENSGT00940000158161 #27	ENSGT00940000158860 #28	ENSGT00940000156542 #29	ENSGT00940000163477 #30	ENSGT00940000160669 #31	ENSGT00400000022095.b #32	ENSGT00950000182981.b.f.b #33	ENSGT00390000015805 #34	ENSGT00940000158169 #35	ENSGT00940000157663 #36	ENSGT00940000154679.ac.a
Chiroptera	ANCESTRAL SPECIES	38	ENSGT00390000001958 #7	ENSGT00390000010711 #8	ENSGT00940000162223 #9	ENSGT00940000163644	ENSGT00390000001017 #11	ENSGT00940000154557.c.b #13	ENSGT00940000165936	ENSGT00950000182931.A #15	ENSGT00950000183117.a.b #16	ENSGT01030000234578.B.b #17	ENSGT00390000017353 #18	ENSGT00940000159669 #19	ENSGT00940000163100.b	ENSGT00940000160210 #20	ENSGT00940000158688 #21	ENSGT00940000159534 #22	ENSGT00940000162710 #23	ENSGT00940000161331 #24	ENSGT00390000006247 #25	ENSGT00940000158411 #26	ENSGT00940000158161 #27	ENSGT00940000158860 #28	ENSGT00940000156542 #29	ENSGT00940000160669 #31	ENSGT00400000022095.b #32	ENSGT00950000182981.b.f.b #33	ENSGT00390000015805 #34	ENSGT00940000158169 #35	ENSGT00940000157663 #36	ENSGT00940000154679.ac.a	ENSGT00950000183011.d
Microchiroptera	ANCESTRAL SPECIES	35	ENSGT00390000001958 #7	ENSGT00390000010711 #8	ENSGT00940000162223 #9	ENSGT00940000163644	ENSGT00390000001017 #11	ENSGT00940000154557.c.b #13	ENSGT00940000165936	ENSGT00950000182931.A #15	ENSGT00950000183117.a.b #16	ENSGT01030000234578.B.b #17	ENSGT00390000017353 #18	ENSGT00940000159669 #19	ENSGT00940000163100.b	ENSGT00940000160210 #20	ENSGT00940000158688 #21	ENSGT00940000159534 #22	ENSGT00940000162710 #23	ENSGT00940000161331 #24	ENSGT00390000006247 #25	ENSGT00940000158411 #26	ENSGT00940000158161 #27	ENSGT00940000158860 #28	ENSGT00940000156542 #29	ENSGT00940000160669 #31	ENSGT00400000022095.b #32	ENSGT00950000182981.b.f.b #33	ENSGT00390000015805 #34	ENSGT00940000158169 #35	ENSGT00940000157663 #36	ENSGT00940000154679.ac.a	ENSGT00950000183011.d
Greater horseshoe bat	MODERN SPECIES	14	ENSRFEG00010012045 #7	WDR77 (ENSRFEG00010011876) #8	ENSRFEG00010011822	PIFO (ENSRFEG00010011650) #11	ENSRFEG00010011574 #13	ENSRFEG00010011181 #13	ENSRFEG00010011002	DENND2D (ENSRFEG00010010907) #15	CEPT1 (ENSRFEG00010010827) #16	DRAM2 (ENSRFEG00010010739) #17	ENSRFEG00010010582 #18	CD53 (ENSRFEG00010010525) #19	ENSRFEG00010010502	KCNA3 (ENSRFEG00010010268) #20	KCNA2 (ENSRFEG00010010249) #21	KCNA10 (ENSRFEG00010010240) #22	ENSRFEG00010010089 #23	PROK1 (ENSRFEG00010010061) #24	ENSRFEG00010010018	ENSRFEG00010009934 #25	SLC16A4 (ENSRFEG00010009487) #26	RBM15 (ENSRFEG00010009371) #27	KCNC4 (ENSRFEG00010009270) #28	SLC6A17 (ENSRFEG00010009210) #29	ALX3 (ENSRFEG00010009070) #31	STRIP1 (ENSRFEG00010009023) #32	AHCYL1 (ENSRFEG00010008907) #33	CSF1 (ENSRFEG00010008846) #34	EPS8L3 (ENSRFEG00010008775) #35	GSTM3 (ENSRFEG00010008722) #36	ENSRFEG00010020038
Microbat	MODERN SPECIES	1038	ENSMLUG00000012427	ENSMLUG00000012417 #7	WDR77 (ENSMLUG00000012412) #8	OVGP1 (ENSMLUG00000012407) #9	ENSMLUG00000012403	PIFO (ENSMLUG00000012396) #11	ENSMLUG00000010599 #13	ENSMLUG00000009000 #13	DENND2D (ENSMLUG00000005114) #15	CEPT1 (ENSMLUG00000005105) #16	ENSMLUG00000005097 #17	LRIF1 (ENSMLUG00000007651) #18	CD53 (ENSMLUG00000007638) #19	ENSMLUG00000029566	KCNA2 (ENSMLUG00000003070) #21	KCNA10 (ENSMLUG00000000167) #22	ENSMLUG00000029099 #23	PROK1 (ENSMLUG00000026358) #24	LAMTOR5 (ENSMLUG00000007198) #25	SLC16A4 (ENSMLUG00000007191) #26	RBM15 (ENSMLUG00000007169) #27	KCNC4 (ENSMLUG00000008507) #28	SLC6A17 (ENSMLUG00000007150) #29	ALX3 (ENSMLUG00000000307) #31	ENSMLUG00000000299 #32	AHCYL1 (ENSMLUG00000000292) #33	CSF1 (ENSMLUG00000000705) #34	EPS8L3 (ENSMLUG00000004394) #35	GSTM3 (ENSMLUG00000004393) #36	PRPF31 (ENSMLUG00000016862)	ENSMLUG00000025653
Megabat	MODERN SPECIES	8150																KCNA10 (ENSPVAG00000002374) #22	PROK1 (ENSPVAG00000002375) #24
Equus	ANCESTRAL SPECIES	3	ENSGT00930000151073	ENSGT00390000015005	ENSGT00390000001958 #7	ENSGT00390000010711 #8	ENSGT00940000162989.c	ENSGT00390000001017 #11	ENSGT00940000163351 #14	ENSGT00950000182931.A #15	ENSGT00950000183117.a.b #16	ENSGT01030000234578.B.b #17	ENSGT00390000017353 #18	ENSGT00940000159669 #19	ENSGT00940000163100.b	ENSGT00940000160210 #20	ENSGT00940000158688 #21	ENSGT00940000159534 #22	ENSGT00940000162710 #23	ENSGT00940000161331 #24	ENSGT00390000006247 #25	ENSGT00940000158411 #26	ENSGT00940000158161 #27	ENSGT00940000158860 #28	ENSGT00940000156542 #29	ENSGT00940000163477 #30	ENSGT00940000160669 #31	ENSGT00400000022095.b #32	ENSGT00950000182981.b.f.b #33	ENSGT00390000015805 #34	ENSGT00940000158169 #35	ENSGT00940000157663 #36	ENSGT00940000154679.ac.a.a
Donkey	MODERN SPECIES	7	TMIGD3 (ENSEASG00005005446)	C1orf162 (ENSEASG00005031971)	ATP5PB (ENSEASG00005005443) #7	WDR77 (ENSEASG00005005441) #8	ENSEASG00005005431	PIFO (ENSEASG00005005425) #11	CHI3L2 (ENSEASG00005005420) #14	DENND2D (ENSEASG00005005415) #15	CEPT1 (ENSEASG00005005407) #16	DRAM2 (ENSEASG00005005403) #17	LRIF1 (ENSEASG00005005401) #18	CD53 (ENSEASG00005005396) #19	ENSEASG00005005393	KCNA3 (ENSEASG00005032553) #20	KCNA2 (ENSEASG00005024346) #21	KCNA10 (ENSEASG00005005382) #22	ENSEASG00005036284 #24	LAMTOR5 (ENSEASG00005027916) #25	SLC16A4 (ENSEASG00005005361) #26	RBM15 (ENSEASG00005005359) #27	KCNC4 (ENSEASG00005005356) #28	SLC6A17 (ENSEASG00005005353) #29	UBL4B (ENSEASG00005032029) #30	ALX3 (ENSEASG00005005343) #31	STRIP1 (ENSEASG00005005337) #32	AHCYL1 (ENSEASG00005005330) #33	CSF1 (ENSEASG00005005326) #34	EPS8L3 (ENSEASG00005005320) #35	GSTM3 (ENSEASG00005005317) #36	ENSEASG00005005310	ENSEASG00005032991
Atlantogenata	ANCESTRAL SPECIES	26	ENSGT00940000162223 #9	ENSGT00940000163644	ENSGT00940000162989.c	ENSGT00390000001017 #11	ENSGT00940000154557.c.a #12	ENSGT00940000163351 #14	ENSGT00940000165936	ENSGT00950000182931.A #15	ENSGT00950000183117.a.b #16	ENSGT01030000234578.B.b #17	ENSGT00390000017353 #18	ENSGT00940000159669 #19	ENSGT00940000163100.b	ENSGT00940000160210 #20	ENSGT00940000158688 #21	ENSGT00940000159534 #22	ENSGT00940000162710 #23	ENSGT00940000161331 #24	ENSGT00390000006247 #25	ENSGT00940000158411 #26	ENSGT00940000158161 #27	ENSGT00940000158860 #28	ENSGT00940000156542 #29	ENSGT00940000163477 #30	ENSGT00940000160669 #31	ENSGT00400000022095.b #32	ENSGT00950000182981.b.f.b #33	ENSGT00390000015805 #34	ENSGT00940000158169 #35	ENSGT00940000157663 #36	ENSGT00940000154679
Xenarthra	ANCESTRAL SPECIES	1204														ENSGT00940000160210 #20	ENSGT00940000158688 #21	ENSGT00940000159534 #22	ENSGT00940000162710 #23
Armadillo	MODERN SPECIES	4685														KCNA3 (ENSDNOG00000048638) #20	KCNA2 (ENSDNOG00000002521) #21	KCNA10 (ENSDNOG00000038221) #22	ENSDNOG00000034473 #23
Marsupialia	ANCESTRAL SPECIES	2	ENSGT00940000162223 #9	ENSGT00940000163644	ENSGT00940000162989.c.c	ENSGT00390000001017 #11	ENSGT00940000154557 #12	ENSGT00940000165936	ENSGT00940000163351 #14	ENSGT00950000182931.A #15	ENSGT00950000183117.a.b #16	ENSGT01030000234578.B.b #17	ENSGT00390000017353 #18	ENSGT00940000159669 #19	ENSGT00940000163100.b	ENSGT00940000160210 #20	ENSGT00940000158688 #21	ENSGT00940000159534 #22	ENSGT00940000162710 #23	ENSGT00940000161331 #24	ENSGT00390000006247 #25	ENSGT00940000158411 #26	ENSGT00940000158161 #27	ENSGT00940000158860 #28	ENSGT00940000156542 #29	ENSGT00940000163477 #30	ENSGT00940000160669 #31	ENSGT00400000022095.b #32	ENSGT00950000182981.b.f.b #33	ENSGT00390000015805 #34	ENSGT00940000158169 #35	ENSGT00940000157663 #36	ENSGT00940000154679
Opossum	MODERN SPECIES	1	ENSMODG00000001372	ENSMODG00000023235	ENSMODG00000001433	PIFO (ENSMODG00000025691) #11	CHIA (ENSMODG00000001467) #12	ENSMODG00000028904	CHI3L2 (ENSMODG00000001485) #14	DENND2D (ENSMODG00000001493) #15	CEPT1 (ENSMODG00000001520) #16	ENSMODG00000040294 #17	LRIF1 (ENSMODG00000001565) #18	ENSMODG00000001608	ENSMODG00000001578 #19	KCNA3 (ENSMODG00000023238) #20	KCNA2 (ENSMODG00000023239) #21	KCNA10 (ENSMODG00000023240) #22	ENSMODG00000001677 #23	PROK1 (ENSMODG00000046351) #24	LAMTOR5 (ENSMODG00000023241) #25	SLC16A4 (ENSMODG00000001701) #26	RBM15 (ENSMODG00000050740) #27	KCNC4 (ENSMODG00000001720) #28	SLC6A17 (ENSMODG00000001744) #29	ENSMODG00000001710 #30	ALX3 (ENSMODG00000001755) #31	STRIP1 (ENSMODG00000001797) #32	AHCYL1 (ENSMODG00000001821) #33	ENSMODG00000001827 #34	ENSMODG00000001842 #35	GSTM3 (ENSMODG00000001876) #36	ENSMODG00000001899
Marsupialia_b	ANCESTRAL SPECIES	1	ENSGT00940000162223 #9	ENSGT00940000163644	ENSGT00940000162989.c.c	ENSGT00390000001017 #11	ENSGT00940000154557 #12	ENSGT00940000165936	ENSGT00940000163351 #14	ENSGT00950000182931.A #15	ENSGT00950000183117.a.b #16	ENSGT01030000234578.B.b #17	ENSGT00390000017353 #18	ENSGT00940000159669 #19	ENSGT00940000163100.b	ENSGT00940000160210 #20	ENSGT00940000158688 #21	ENSGT00940000159534 #22	ENSGT00940000162710 #23	ENSGT00940000161331 #24	ENSGT00390000006247 #25	ENSGT00940000158411 #26	ENSGT00940000158161 #27	ENSGT00940000158860 #28	ENSGT00940000156542 #29	ENSGT00940000163477 #30	ENSGT00940000160669 #31	ENSGT00400000022095.b #32	ENSGT00950000182981.b.f.b #33	ENSGT00390000015805 #34	ENSGT00940000158169 #35	ENSGT00940000157663 #36	ENSGT00940000154679
Diprotodontia	ANCESTRAL SPECIES	5	ENSGT00390000001958 #7	ENSGT00390000010711 #8	ENSGT00940000162223 #9	ENSGT00940000163644	ENSGT00390000001017 #11	ENSGT00940000154557 #12	ENSGT00940000163351 #14	ENSGT00950000182931.A #15	ENSGT00950000183117.a.b #16	ENSGT01030000234578.B.b #17	ENSGT00390000017353 #18	ENSGT00940000159669 #19	ENSGT00940000163100.b	ENSGT00940000160210 #20	ENSGT00940000158688 #21	ENSGT00940000159534 #22	ENSGT00940000162710 #23	ENSGT00940000161331 #24	ENSGT00390000006247 #25	ENSGT00940000158411 #26	ENSGT00940000158161 #27	ENSGT00940000158860 #28	ENSGT00940000156542 #29	ENSGT00940000163477 #30	ENSGT00940000160669 #31	ENSGT00400000022095.b #32	ENSGT00950000182981.b.f.b #33	ENSGT00390000015805 #34	ENSGT00940000158169 #35	ENSGT00940000157663 #36	ENSGT00940000154679
Diprotodontia_a	ANCESTRAL SPECIES	6	ENSGT00390000001958 #7	ENSGT00390000010711 #8	ENSGT00940000162223 #9	ENSGT00940000163644	ENSGT00390000001017 #11	ENSGT00940000154557 #12	ENSGT00940000163351 #14	ENSGT00950000182931.A #15	ENSGT00950000183117.a.b #16	ENSGT01030000234578.B.b #17	ENSGT00390000017353 #18	ENSGT00940000159669 #19	ENSGT00940000163100.b	ENSGT00940000160210 #20	ENSGT00940000158688 #21	ENSGT00940000159534 #22	ENSGT00940000162710 #23	ENSGT00940000161331 #24	ENSGT00390000006247 #25	ENSGT00940000158411 #26	ENSGT00940000158161 #27	ENSGT00940000158860 #28	ENSGT00940000156542 #29	ENSGT00940000163477 #30	ENSGT00940000160669 #31	ENSGT00400000022095.b #32	ENSGT00950000182981.b.f.b #33	ENSGT00390000015805 #34	ENSGT00940000158169 #35	ENSGT00940000157663 #36	ENSGT00940000154679
Common wonbat	MODERN SPECIES	732						ENSVURG00010010929	ENSVURG00010011381 #14	DENND2D (ENSVURG00010011414) #15	CEPT1 (ENSVURG00010011444) #16	DRAM2 (ENSVURG00010011460) #17	LRIF1 (ENSVURG00010011468) #18	CD53 (ENSVURG00010011473) #19	ENSVURG00010011486	KCNA3 (ENSVURG00010011490) #20	KCNA2 (ENSVURG00010011497) #21	KCNA10 (ENSVURG00010011510) #22	ENSVURG00010011568 #23	PROK1 (ENSVURG00010013037) #24	LAMTOR5 (ENSVURG00010013050) #25	SLC16A4 (ENSVURG00010013066) #26	RBM15 (ENSVURG00010013079) #27	KCNC4 (ENSVURG00010013086) #28	SLC6A17 (ENSVURG00010013098) #29	ENSVURG00010013114 #30	ALX3 (ENSVURG00010013120) #31	STRIP1 (ENSVURG00010013136) #32	AHCYL1 (ENSVURG00010013168) #33	ENSVURG00010013189 #34	GSTM3 (ENSVURG00010013205) #36	ENSVURG00010013260	AMPD2 (ENSVURG00010014254)
koala	MODERN SPECIES	4	ATP5PB (ENSPCIG00000027732) #7	ENSPCIG00000027736 #8	ENSPCIG00000027738 #9	ENSPCIG00000027740	ENSPCIG00000032895 #11	CHIA (ENSPCIG00000022003) #12	CHI3L2 (ENSPCIG00000021992) #14	DENND2D (ENSPCIG00000021982) #15	CEPT1 (ENSPCIG00000021979) #16	DRAM2 (ENSPCIG00000021977) #17	LRIF1 (ENSPCIG00000021975) #18	CD53 (ENSPCIG00000021974) #19	ENSPCIG00000021972	KCNA3 (ENSPCIG00000031331) #20	KCNA2 (ENSPCIG00000021969) #21	KCNA10 (ENSPCIG00000021967) #22	ENSPCIG00000021939 #23	PROK1 (ENSPCIG00000035325) #24	ENSPCIG00000003396 #25	SLC16A4 (ENSPCIG00000003431) #26	RBM15 (ENSPCIG00000003458) #27	KCNC4 (ENSPCIG00000003874) #28	SLC6A17 (ENSPCIG00000003471) #29	ENSPCIG00000034906	ALX3 (ENSPCIG00000003613) #31	STRIP1 (ENSPCIG00000003626) #32	AHCYL1 (ENSPCIG00000003650) #33	ENSPCIG00000003681 #34	ENSPCIG00000036193 #35	GSTM3 (ENSPCIG00000005714) #36	ENSPCIG00000005718
Wallaby	MODERN SPECIES	12164																KCNA10 (ENSMEUG00000010861) #22
Tasmanian devil	MODERN SPECIES	3	ENSSHAG00000012931	ENSSHAG00000012762	PIFO (ENSSHAG00000012723) #11	ENSSHAG00000012627 #12	ENSSHAG00000012514 #12	ENSSHAG00000012343	CHI3L2 (ENSSHAG00000012261) #14	DENND2D (ENSSHAG00000011923) #15	CEPT1 (ENSSHAG00000011699) #16	DRAM2 (ENSSHAG00000011463) #17	LRIF1 (ENSSHAG00000010853) #18	ENSSHAG00000031397	CD53 (ENSSHAG00000010561) #19	KCNA3 (ENSSHAG00000025466) #20	KCNA2 (ENSSHAG00000021127) #21	KCNA10 (ENSSHAG00000004370) #22	ENSSHAG00000002426 #23	ENSSHAG00000029934 #24	SLC16A4 (ENSSHAG00000010723) #26	RBM15 (ENSSHAG00000027539) #27	KCNC4 (ENSSHAG00000030725) #28	SLC6A17 (ENSSHAG00000008817) #29	ENSSHAG00000027238	ENSSHAG00000023762 #30	ALX3 (ENSSHAG00000026336) #31	AHCYL1 (ENSSHAG00000022482) #33	STRIP1 (ENSSHAG00000006640) #32	ENSSHAG00000004151 #34	ENSSHAG00000002022 #35	GSTM3 (ENSSHAG00000005779) #36	GSTM4 (ENSSHAG00000005598)
Platypus	MODERN SPECIES	18	PIM1 (ENSOANG00000050736)	ENSOANG00000041121	MTCH1 (ENSOANG00000006357)	ENSOANG00000028825	ENSOANG00000015027	PPIL1 (ENSOANG00000045861)	CPNE5 (ENSOANG00000039424)	ENSOANG00000038722	ENSOANG00000042080	SRSF3 (ENSOANG00000020536)	STK38 (ENSOANG00000049988)	KCTD20 (ENSOANG00000042913)	ENSOANG00000042437	KCNA3 (ENSOANG00000048083) #20	KCNA2 (ENSOANG00000004018) #21	KCNA10 (ENSOANG00000004019) #22	ENSOANG00000004020 #23	PROK1 (ENSOANG00000038522) #24	LAMTOR5 (ENSOANG00000004021) #25	SLC16A4 (ENSOANG00000004024) #26	RBM15 (ENSOANG00000049113) #27	KCNC4 (ENSOANG00000051178) #28	SLC6A17 (ENSOANG00000005887) #29	ENSOANG00000005886 #31	STRIP1 (ENSOANG00000005885) #32	AHCYL1 (ENSOANG00000005884) #33	ENSOANG00000006943 #34	ENSOANG00000011989 #35	ENSOANG00000042019 #36	AMPD2 (ENSOANG00000043997)	GNAT2 (ENSOANG00000002263)
Sauria	ANCESTRAL SPECIES	24	ENSGT00390000014270	ENSGT00940000160379	ENSGT00440000033504.C	ENSGT00940000159918.a.b	ENSGT00910000144115.a	ENSGT00970000193695	ENSGT00940000169569	ENSGT00940000153544.a	ENSGT00390000007975.b	ENSGT00940000162211	ENSGT00940000160828.b	ENSGT00940000160828.a	ENSGT00550000074828.b	ENSGT00940000160210 #20	ENSGT00940000158688 #21	ENSGT00940000159534 #22	ENSGT00940000162163	ENSGT00940000162710 #23	ENSGT00940000161331 #24	ENSGT00390000006247 #25	ENSGT00940000158411 #26	ENSGT00940000158161 #27	ENSGT00940000158860 #28	ENSGT00940000156542 #29	ENSGT00940000160669 #31	ENSGT00400000022095.b #32	ENSGT00950000182981.b.f.b #33	ENSGT00390000015805 #34	ENSGT00940000158169 #35	ENSGT00940000160258 #37	ENSGT00940000154679
Lepidosauria	ANCESTRAL SPECIES	79														ENSGT00940000160210 #20	ENSGT00940000158688 #21	ENSGT00940000159534 #22	ENSGT00940000162163	ENSGT00940000162710 #23	ENSGT00940000161331 #24	ENSGT00390000006247 #25	ENSGT00940000158411 #26	ENSGT00940000158161 #27	ENSGT00940000158860 #28	ENSGT00940000156542 #29	ENSGT00730000111022.n	ENSGT00940000160669 #31	ENSGT00400000022095.b #32	ENSGT00950000182981.b.f.b #33	ENSGT00390000015805 #34	ENSGT00940000158169 #35	ENSGT00940000157663 #36
Episquamata	ANCESTRAL SPECIES	1	ENSGT00390000011838	ENSGT01050000244838.H.d	ENSGT00950000183104.A.a.a	ENSGT00940000161225	ENSGT00940000157693	ENSGT00510000048988	ENSGT00940000162489.d	ENSGT00390000003015	ENSGT00620000088018	ENSGT00390000014984	ENSGT00390000006224	ENSGT00530000063561	ENSGT00390000017407	ENSGT00940000160210 #20	ENSGT00940000158688 #21	ENSGT00940000159534 #22	ENSGT00940000162163	ENSGT00940000162710 #23	ENSGT00940000161331 #24	ENSGT00390000006247 #25	ENSGT00940000158411 #26	ENSGT00940000158161 #27	ENSGT00940000158860 #28	ENSGT00940000156542 #29	ENSGT00730000111022.n	ENSGT00400000022095.b #32	ENSGT00950000182981.b.f.b #33	ENSGT00390000015805 #34	ENSGT00940000158169 #35	ENSGT00940000157663 #36	ENSGT00940000160258 #37
Laterata	ANCESTRAL SPECIES	3	ENSGT00390000011838	ENSGT01050000244838.H.d	ENSGT00950000183104.A.a.a	ENSGT00940000161225	ENSGT00940000157693	ENSGT00510000048988	ENSGT00940000162489.d	ENSGT00390000003015	ENSGT00620000088018	ENSGT00390000014984	ENSGT00390000006224	ENSGT00530000063561	ENSGT00390000017407	ENSGT00940000160210 #20	ENSGT00940000158688 #21	ENSGT00940000159534 #22	ENSGT00940000162710 #23	ENSGT00940000161331 #24	ENSGT00390000006247 #25	ENSGT00940000158411 #26	ENSGT00940000158161 #27	ENSGT00940000158860 #28	ENSGT00940000156542 #29	ENSGT00730000111022.n	ENSGT00400000022095.b #32	ENSGT00950000182981.b.f.b #33	ENSGT00390000015805 #34	ENSGT00940000158169.c #35	ENSGT00940000157663 #36	ENSGT00940000154679	ENSGT00950000183011.d
Common wall lizard	MODERN SPECIES	14	ELOVL1 (ENSPMRG00000011550)	CDC20 (ENSPMRG00000011553)	MPL (ENSPMRG00000011559)	TIE1 (ENSPMRG00000011565)	ENSPMRG00000011582	ENSPMRG00000011585	TMEM125 (ENSPMRG00000011589)	CFAP57 (ENSPMRG00000011599)	EBNA1BP2 (ENSPMRG00000011610)	CFAP144 (ENSPMRG00000011614)	PIF1 (ENSPMRG00000011617)	ENSPMRG00000011622	ENSPMRG00000011630	KCNA3 (ENSPMRG00000011635) #20	KCNA2 (ENSPMRG00000011641) #21	KCNA10 (ENSPMRG00000011643) #22	ENSPMRG00000011650	ENSPMRG00000011693 #23	ENSPMRG00000011880 #23	ENSPMRG00000011984 #23	ENSPMRG00000012058 #23	PROK1 (ENSPMRG00000012064) #24	ENSPMRG00000012068	ENSPMRG00000012070 #25	SLC16A4 (ENSPMRG00000012077) #26	RBM15 (ENSPMRG00000012084) #27	KCNC4 (ENSPMRG00000012085) #28	SLC6A17 (ENSPMRG00000012090) #29	ENSPMRG00000012094	STRIP1 (ENSPMRG00000012099) #32	AHCYL1 (ENSPMRG00000012112) #33
Argentine black and white tegu	MODERN SPECIES	16	PTPRF (ENSSMRG00000018412)	HYI (ENSSMRG00000018414)	ELOVL1 (ENSSMRG00000018418)	CDC20 (ENSSMRG00000018419)	TIE1 (ENSSMRG00000018421)	ENSSMRG00000018422	ENSSMRG00000018424	TMEM125 (ENSSMRG00000018425)	CFAP57 (ENSSMRG00000018426)	EBNA1BP2 (ENSSMRG00000018427)	CFAP144 (ENSSMRG00000018428)	PIF1 (ENSSMRG00000018429)	ENSSMRG00000018430	KCNA3 (ENSSMRG00000018432) #20	KCNA2 (ENSSMRG00000018434) #21	KCNA10 (ENSSMRG00000018435) #22	ENSSMRG00000018436 #23	PROK1 (ENSSMRG00000018437) #24	LAMTOR5 (ENSSMRG00000018438) #25	RBM15 (ENSSMRG00000018440) #27	KCNC4 (ENSSMRG00000018441) #28	ENSSMRG00000018442 #29	ENSSMRG00000018443 #29	ENSSMRG00000018444	STRIP1 (ENSSMRG00000018445) #32	AHCYL1 (ENSSMRG00000018449) #33	ENSSMRG00000018451 #34	ENSSMRG00000018452 #35	ENSSMRG00000018454 #35	GSTM3 (ENSSMRG00000018455) #36	GSTM4 (ENSSMRG00000018456)
Toxicofera	ANCESTRAL SPECIES	1	ENSGT00390000018402	ENSGT00390000011838	ENSGT01050000244838.H.d	ENSGT00950000183104.A.a.a	ENSGT00940000161225	ENSGT00940000157693	ENSGT00510000048988	ENSGT00390000003015	ENSGT00620000088018	ENSGT00390000014984	ENSGT00390000006224	ENSGT00530000063561	ENSGT00390000017407	ENSGT00940000160210 #20	ENSGT00940000158688 #21	ENSGT00940000159534 #22	ENSGT00940000163334	ENSGT00940000162163	ENSGT00940000162710 #23	ENSGT00940000161331 #24	ENSGT00390000006247 #25	ENSGT00940000158411 #26	ENSGT00940000158161 #27	ENSGT00940000158860 #28	ENSGT00940000156542 #29	ENSGT00730000111022.n	ENSGT00400000022095.b #32	ENSGT00950000182981.b.f.b #33	ENSGT00390000015805 #34	ENSGT00940000158169 #35	ENSGT00940000157663 #36
Elapidae	ANCESTRAL SPECIES	1	ENSGT00390000018402	ENSGT00390000011838	ENSGT01050000244838.H.d	ENSGT00950000183104.A.a.a	ENSGT00940000161225	ENSGT00940000157693	ENSGT00510000048988	ENSGT00390000003015	ENSGT00620000088018	ENSGT00390000014984	ENSGT00390000006224	ENSGT00530000063561	ENSGT00390000017407	ENSGT00940000160210 #20	ENSGT00940000158688 #21	ENSGT00940000159534 #22	ENSGT00940000163334	ENSGT00940000162163	ENSGT00940000162710 #23	ENSGT00940000161331 #24	ENSGT00390000006247 #25	ENSGT00940000158411 #26	ENSGT00940000158161 #27	ENSGT00940000158860 #28	ENSGT00940000156542 #29	ENSGT00400000022095.b.g #32	ENSGT00950000182981.b.f.b #33	ENSGT00390000015805 #34	ENSGT00940000158169 #35	ENSGT00940000157663 #36	ENSGT00940000160258 #37
Elapidae_a	ANCESTRAL SPECIES	7	ENSGT00390000018402	ENSGT00390000011838.a	ENSGT01050000244838.H.d	ENSGT00950000183104.A.a.a	ENSGT00940000161225	ENSGT00940000157693	ENSGT00510000048988	ENSGT00390000003015	ENSGT00620000088018	ENSGT00390000014984	ENSGT00390000006224	ENSGT00530000063561	ENSGT00390000017407	ENSGT00940000160210 #20	ENSGT00940000158688 #21	ENSGT00940000159534 #22	ENSGT00940000163334	ENSGT00940000162163	ENSGT00940000162710 #23	ENSGT00940000161331 #24	ENSGT00390000006247 #25	ENSGT00940000158411 #26	ENSGT00940000158161 #27	ENSGT00940000158860 #28	ENSGT00940000156542 #29	ENSGT00400000022095.b.g #32	ENSGT00950000182981.b.f.b #33	ENSGT00390000015805 #34	ENSGT00940000158169 #35	ENSGT00940000157663 #36	ENSGT00940000160258 #37
Acanthophiinae	ANCESTRAL SPECIES	5	ENSGT00390000018402	ENSGT00390000011838.a	ENSGT01050000244838.H.d	ENSGT00950000183104.A.a.a	ENSGT00940000161225	ENSGT00940000157693.h	ENSGT00510000048988	ENSGT00390000003015	ENSGT00620000088018	ENSGT00390000014984	ENSGT00390000006224	ENSGT00530000063561	ENSGT00390000017407	ENSGT00940000160210 #20	ENSGT00940000158688 #21	ENSGT00940000159534 #22	ENSGT00940000162163.d	ENSGT00940000163334	ENSGT00940000162163.c	ENSGT00940000162710 #23	ENSGT00940000161331 #24	ENSGT00390000006247 #25	ENSGT00940000158411 #26	ENSGT00940000158161 #27	ENSGT00940000158860 #28	ENSGT00940000156542 #29	ENSGT00400000022095.b.g #32	ENSGT00950000182981.b.f.b #33	ENSGT00390000015805 #34	ENSGT00940000158169 #35	ENSGT00940000157663 #36
Mainland tiger snake	DUPLICATION
Mainland tiger snake	MODERN SPECIES	97	ENSNSUG00000015343	ENSNSUG00000015345	ENSNSUG00000015346	ENSNSUG00000015347	ENSNSUG00000015348	ENSNSUG00000015349	ENSNSUG00000015350	ENSNSUG00000015351	ENSNSUG00000015352	ENSNSUG00000015353	ENSNSUG00000015354	ENSNSUG00000015355	ENSNSUG00000015356	ENSNSUG00000015357 #20	ENSNSUG00000015358 #21	ENSNSUG00000015359 #22	ENSNSUG00000015360	ENSNSUG00000015361	ENSNSUG00000015362 #23	ENSNSUG00000015363 #24	ENSNSUG00000015364 #25	ENSNSUG00000015365 #26	ENSNSUG00000015502 #27	ENSNSUG00000015503 #28	ENSNSUG00000015504 #29	ENSNSUG00000015505 #32	ENSNSUG00000015508 #33	ENSNSUG00000015632	ENSNSUG00000015633 #35	ENSNSUG00000015635 #37	ENSNSUG00000015636
Mainland tiger snake	MODERN SPECIES	95	ENSNSUG00000015175	ENSNSUG00000015174	ENSNSUG00000015173	ENSNSUG00000015172	ENSNSUG00000015171	ENSNSUG00000015170	ENSNSUG00000015169	ENSNSUG00000015168	ENSNSUG00000015167	ENSNSUG00000015166	ENSNSUG00000015165	ENSNSUG00000015164	ENSNSUG00000015163	ENSNSUG00000015162 #20	ENSNSUG00000015161 #21	ENSNSUG00000015159 #22	ENSNSUG00000015158 #23	ENSNSUG00000015157 #23	ENSNSUG00000015156 #24	ENSNSUG00000015155 #25	ENSNSUG00000015123 #26	ENSNSUG00000015122 #27	ENSNSUG00000015121 #28	ENSNSUG00000015116 #29	ENSNSUG00000015052 #32	ENSNSUG00000015050 #33	ENSNSUG00000015049	ENSNSUG00000015047 #35	ENSNSUG00000015046 #37	ENSNSUG00000015045	ENSNSUG00000014923
Eastern brown snake	MODERN SPECIES	34	HYI (ENSPTXG00000001306)	MED8 (ENSPTXG00000001280)	ELOVL1 (ENSPTXG00000001277)	CDC20 (ENSPTXG00000001246)	ENSPTXG00000001236	TIE1 (ENSPTXG00000001151)	ENSPTXG00000001121	TMEM125 (ENSPTXG00000001118)	CFAP57 (ENSPTXG00000001111)	EBNA1BP2 (ENSPTXG00000001101)	CFAP144 (ENSPTXG00000001098)	PIF1 (ENSPTXG00000000633)	ENSPTXG00000000612	KCNA3 (ENSPTXG00000000593) #20	KCNA2 (ENSPTXG00000000587) #21	KCNA10 (ENSPTXG00000000583) #22	ENSPTXG00000000576	ENSPTXG00000000566	ENSPTXG00000000550 #23	PROK1 (ENSPTXG00000000532) #24	LAMTOR5 (ENSPTXG00000000526) #25	SLC16A4 (ENSPTXG00000000469) #26	RBM15 (ENSPTXG00000000443) #27	KCNC4 (ENSPTXG00000000427) #28	SLC6A17 (ENSPTXG00000000397) #29	STRIP1 (ENSPTXG00000000365) #32	AHCYL1 (ENSPTXG00000000341) #33	ENSPTXG00000000324 #34	ENSPTXG00000000317 #35	GSTM3 (ENSPTXG00000000295) #36	GSTM4 (ENSPTXG00000000281)
Blue-lipped sea krait	MODERN SPECIES	101																KCNA10 (ENSLLTG00000000066) #22
Indian cobra	MODERN SPECIES	2	MED8 (ENSNNAG00000004256)	ENSNNAG00000004243	ELOVL1 (ENSNNAG00000004211)	CDC20 (ENSNNAG00000004181)	MPL (ENSNNAG00000004156)	ENSNNAG00000004135	TIE1 (ENSNNAG00000004095)	TMEM125 (ENSNNAG00000004070)	CFAP57 (ENSNNAG00000004019)	EBNA1BP2 (ENSNNAG00000003979)	CFAP144 (ENSNNAG00000003961)	PIF1 (ENSNNAG00000003891)	ENSNNAG00000003852	KCNA3 (ENSNNAG00000003832) #20	KCNA2 (ENSNNAG00000003811) #21	KCNA10 (ENSNNAG00000003798) #22	ENSNNAG00000003766	ENSNNAG00000003676 #23	PROK1 (ENSNNAG00000003651) #24	LAMTOR5 (ENSNNAG00000003641) #25	SLC16A4 (ENSNNAG00000003623) #26	RBM15 (ENSNNAG00000003577) #27	KCNC4 (ENSNNAG00000003546) #28	ENSNNAG00000003539 #29	ENSNNAG00000003530 #29	STRIP1 (ENSNNAG00000003491) #32	AHCYL1 (ENSNNAG00000003467) #33	ENSNNAG00000003451 #34	ENSNNAG00000003435 #35	GSTM1 (ENSNNAG00000003417) #37	ENSNNAG00000003410
Lizard	MODERN SPECIES	3	TIE1 (ENSACAG00000013254)	c4h1orf210 (ENSACAG00000037809)	ENSACAG00000044286	ENSACAG00000040625	TMEM125 (ENSACAG00000013249)	ENSACAG00000042921	CFAP57 (ENSACAG00000013236)	EBNA1BP2 (ENSACAG00000013204)	CFAP144 (ENSACAG00000028967)	ENSACAG00000013162	snapc2 (ENSACAG00000037092)	ENSACAG00000028621	KCNA3 (ENSACAG00000013141) #20	KCNA2 (ENSACAG00000021005) #21	ENSACAG00000044566	KCNA10 (ENSACAG00000015995) #22	ENSACAG00000013098	ENSACAG00000012843 #23	PROK1 (ENSACAG00000037571) #24	LAMTOR5 (ENSACAG00000045403) #25	SLC16A4 (ENSACAG00000012759) #26	RBM15 (ENSACAG00000012741) #27	KCNC4 (ENSACAG00000012721) #28	SLC6A17 (ENSACAG00000012493) #29	ENSACAG00000044928	STRIP1 (ENSACAG00000012251) #32	AHCYL1 (ENSACAG00000012027) #33	ENSACAG00000012025 #34	ENSACAG00000028264	EPS8L3 (ENSACAG00000011982) #35	ENSACAG00000011773 #36
tuatara	MODERN SPECIES	1672																KCNA10 (ENSSPUG00000010132) #22	ENSSPUG00000010115 #23	PROK1 (ENSSPUG00000010101) #24	LAMTOR5 (ENSSPUG00000010076) #25	SLC16A4 (ENSSPUG00000009716) #26	KCNC4 (ENSSPUG00000009540) #28	SLC6A17 (ENSSPUG00000009420) #29	ENSSPUG00000009394	ALX3 (ENSSPUG00000009374) #31	STRIP1 (ENSSPUG00000009327) #32	AHCYL1 (ENSSPUG00000009299) #33
Archelosauria	ANCESTRAL SPECIES	22	ENSGT00390000014270	ENSGT00940000160379	ENSGT00440000033504.C	ENSGT00940000159918.a.b	ENSGT00910000144115.a	ENSGT00970000193695	ENSGT00940000153544.a	ENSGT00390000007975.b	ENSGT00940000162211	ENSGT00940000154318.A.f	ENSGT00940000160828.b	ENSGT00940000160828.a	ENSGT00550000074828.b	ENSGT00940000160210 #20	ENSGT00940000158688 #21	ENSGT00940000159534 #22	ENSGT00940000162163	ENSGT00940000162710 #23	ENSGT00940000161331 #24	ENSGT00390000006247 #25	ENSGT00940000158411 #26	ENSGT00940000158161 #27	ENSGT00940000158860 #28	ENSGT00940000156542 #29	ENSGT00940000160669 #31	ENSGT00400000022095.b #32	ENSGT00950000182981.b.f.b #33	ENSGT00390000015805 #34	ENSGT00940000158169 #35	ENSGT00940000160258 #37	ENSGT00940000154679
Cryptodira	ANCESTRAL SPECIES	27	ENSGT00390000000020.a	ENSGT00940000163908	ENSGT00390000014270	ENSGT00940000160379	ENSGT00940000159918.a.b	ENSGT00910000144115.a	ENSGT00970000193695	ENSGT00940000153544.a	ENSGT00390000007975.b	ENSGT00940000162211	ENSGT00940000154318.A.f	ENSGT00940000160828.b	ENSGT00550000074828.b	ENSGT00940000160210 #20	ENSGT00940000158688 #21	ENSGT00940000159534 #22	ENSGT00940000161354.b.b	ENSGT00940000161331 #24	ENSGT00390000006247 #25	ENSGT00940000158411 #26	ENSGT00940000158161 #27	ENSGT00940000158860 #28	ENSGT00940000156542 #29	ENSGT00940000160669 #31	ENSGT00400000022095.b #32	ENSGT00950000182981.b.f.b #33	ENSGT00390000015805 #34	ENSGT00940000158169 #35	ENSGT00940000157663 #36	ENSGT00940000154679
Testudinoidea	ANCESTRAL SPECIES	22	ENSGT00390000000020.a	ENSGT00940000163908	ENSGT00390000014270	ENSGT00940000160379	ENSGT00940000159918.a.b	ENSGT00910000144115.a	ENSGT00970000193695	ENSGT00940000153544.a	ENSGT00390000007975.b	ENSGT00940000162211	ENSGT00940000154318.A.f	ENSGT00940000160828.b	ENSGT00550000074828.b	ENSGT00940000160210 #20	ENSGT00940000158688 #21	ENSGT00940000159534 #22	ENSGT00940000161354.b.b	ENSGT00940000161331 #24	ENSGT00390000006247 #25	ENSGT00940000158411 #26	ENSGT00940000158161 #27	ENSGT00940000158860 #28	ENSGT00940000156542 #29	ENSGT00940000160669 #31	ENSGT00400000022095.b #32	ENSGT00950000182981.b.f.b #33	ENSGT00390000015805 #34	ENSGT00940000158169 #35	ENSGT00940000157663 #36	ENSGT00940000154679.f.a	ENSGT00940000160258 #37
Emydidae	ANCESTRAL SPECIES	78	ENSGT00390000000020.a	ENSGT00940000163908	ENSGT00390000014270	ENSGT00940000160379	ENSGT00940000159918.a.b	ENSGT00910000144115.a	ENSGT00970000193695	ENSGT00940000153544.a	ENSGT00390000007975.b	ENSGT00940000162211	ENSGT00940000154318.A.f	ENSGT00940000160828.b	ENSGT00550000074828.b	ENSGT00940000160210 #20	ENSGT00940000158688 #21	ENSGT00940000159534 #22	ENSGT00940000161354.b.b	ENSGT00940000161331 #24	ENSGT00390000006247 #25	ENSGT00940000158411 #26	ENSGT00940000158161 #27	ENSGT00940000158860 #28	ENSGT00940000156542 #29	ENSGT00940000160669 #31	ENSGT00400000022095.b #32	ENSGT00950000182981.b.f.b #33	ENSGT00390000015805 #34
painted turtle	MODERN SPECIES	13	ENSCPBG00000025274	C6orf89 (ENSCPBG00000025277)	ENSCPBG00000025279	CDKN1A (ENSCPBG00000025285)	SRSF3 (ENSCPBG00000025286)	ENSCPBG00000025287	STK38 (ENSCPBG00000025288)	KCTD20 (ENSCPBG00000025292)	ENSCPBG00000025295	ETV7 (ENSCPBG00000025297)	ENSCPBG00000025300	ENSCPBG00000025307	ENSCPBG00000025311	KCNA3 (ENSCPBG00000025315) #20	KCNA2 (ENSCPBG00000025318) #21	KCNA10 (ENSCPBG00000025320) #22	ENSCPBG00000000107	RHOD (ENSCPBG00000000110)	KDM2A (ENSCPBG00000000117)	GRK2 (ENSCPBG00000000461)	ANKRD13D (ENSCPBG00000009323)	SSH3 (ENSCPBG00000009325)	ENSCPBG00000009327	POLD4 (ENSCPBG00000009329)	ENSCPBG00000009332	ENSCPBG00000009334	ENSCPBG00000009337	CLCF1 (ENSCPBG00000009339)	RAD9A (ENSCPBG00000009342)	PPP1CA (ENSCPBG00000009344)	TBC1D10C (ENSCPBG00000009346)
Three-toed box turtle	MODERN SPECIES	270	PIM1 (ENSTMTG00000011653)	FGD2 (ENSTMTG00000011672)	MTCH1 (ENSTMTG00000011696)	ENSTMTG00000011744	C6orf89 (ENSTMTG00000011806)	CDKN1A (ENSTMTG00000011831)	SRSF3 (ENSTMTG00000011841)	STK38 (ENSTMTG00000011856)	KCTD20 (ENSTMTG00000011901)	ETV7 (ENSTMTG00000011936)	ENSTMTG00000011950	ENSTMTG00000011984	ENSTMTG00000012096	KCNA3 (ENSTMTG00000012108) #20	KCNA2 (ENSTMTG00000012120) #21	KCNA10 (ENSTMTG00000012135) #22	ENSTMTG00000012146	PROK1 (ENSTMTG00000012166) #24	LAMTOR5 (ENSTMTG00000012187) #25	SLC16A4 (ENSTMTG00000012196) #26	RBM15 (ENSTMTG00000016697) #27	KCNC4 (ENSTMTG00000016705) #28	SLC6A17 (ENSTMTG00000016721) #29	ALX3 (ENSTMTG00000016826) #31	STRIP1 (ENSTMTG00000016843) #32	AHCYL1 (ENSTMTG00000016876) #33	ENSTMTG00000016910 #34	ENSTMTG00000016978	ENSTMTG00000017069
Testudinidae	ANCESTRAL SPECIES	26	ENSGT00390000000020.a	ENSGT00940000163908	ENSGT00390000014270	ENSGT00940000160379	ENSGT00940000159918.a.b	ENSGT00910000144115.a	ENSGT00940000153544.a	ENSGT00390000007975.b	ENSGT00950000185878	ENSGT00940000162211	ENSGT00940000160828.b	ENSGT00940000160828.a	ENSGT00550000074828.b	ENSGT00940000160210 #20	ENSGT00940000158688 #21	ENSGT00940000159534 #22	ENSGT00940000161331 #24	ENSGT00390000006247 #25	ENSGT00940000158411 #26	ENSGT00940000158161 #27	ENSGT00940000158860 #28	ENSGT00940000156542 #29	ENSGT00940000160669 #31	ENSGT00400000022095.b #32	ENSGT00950000182981.b.f.b #33	ENSGT00390000015805 #34	ENSGT00940000158169 #35	ENSGT00940000154679.f.b.b	ENSGT00940000160258 #37	ENSGT00940000154679.f.b.a	ENSGT00390000000819.b
Abingdon island giant tortoise	MODERN SPECIES	2299	FGD2 (ENSCABG00000007064)	MTCH1 (ENSCABG00000007052)	ENSCABG00000007033	C6orf89 (ENSCABG00000007031)	CDKN1A (ENSCABG00000007029)	SRSF3 (ENSCABG00000007025)	STK38 (ENSCABG00000006649)	ENSCABG00000006647	ENSCABG00000006646	ETV7 (ENSCABG00000006645)	ENSCABG00000006620	ENSCABG00000006603	ENSCABG00000006600	KCNA3 (ENSCABG00000006598) #20	KCNA2 (ENSCABG00000006597) #21	KCNA10 (ENSCABG00000006596) #22	PROK1 (ENSCABG00000006595) #24	LAMTOR5 (ENSCABG00000006594) #25	SLC16A4 (ENSCABG00000006381) #26	RBM15 (ENSCABG00000006376) #27	KCNC4 (ENSCABG00000006375) #28	SLC6A17 (ENSCABG00000006330) #29
Goode s thornscrub tortoise	MODERN SPECIES	18	ENSGEVG00005000885	FGD2 (ENSGEVG00005000800)	MTCH1 (ENSGEVG00005000744)	ENSGEVG00005000717	C6orf89 (ENSGEVG00005000656)	ENSGEVG00005000621	ENSGEVG00005000594	CDKN1A (ENSGEVG00005000580)	SRSF3 (ENSGEVG00005000564)	STK38 (ENSGEVG00005000539)	KCTD20 (ENSGEVG00005000508)	ENSGEVG00005000386	ENSGEVG00005000270	KCNA3 (ENSGEVG00005000234) #20	KCNA2 (ENSGEVG00005000220) #21	KCNA10 (ENSGEVG00005000204) #22	PROK1 (ENSGEVG00005000189) #24	LAMTOR5 (ENSGEVG00005000171) #25	SLC16A4 (ENSGEVG00005019205) #26	RBM15 (ENSGEVG00005019171) #27	KCNC4 (ENSGEVG00005019164) #28	SLC6A17 (ENSGEVG00005019135) #29	ALX3 (ENSGEVG00005019111) #31	STRIP1 (ENSGEVG00005019070) #32	AHCYL1 (ENSGEVG00005019047) #33	ENSGEVG00005019005 #34	ENSGEVG00005018977 #35	GSTM1 (ENSGEVG00005018961) #37	ENSGEVG00005018945	TMEM9 (ENSGEVG00005018890)	ENSGEVG00005018819
Chinese turtle	MODERN SPECIES	563																KCNA10 (ENSPSIG00000001117) #22	ENSPSIG00000006472	PROK1 (ENSPSIG00000006951) #24
Archosauria	ANCESTRAL SPECIES	23	ENSGT00940000163908	ENSGT00390000014270	ENSGT00940000160379	ENSGT00940000159918.a.b	ENSGT00910000144115.a	ENSGT00970000193695	ENSGT00940000153544.a	ENSGT00390000007975.b	ENSGT00940000162211	ENSGT00940000154318.A.f	ENSGT00940000160828.b	ENSGT00940000160828.a	ENSGT00550000074828.b	ENSGT00940000160210 #20	ENSGT00940000158688 #21	ENSGT00940000159534 #22	ENSGT00940000162163	ENSGT00940000162710 #23	ENSGT00940000161331 #24	ENSGT00390000006247 #25	ENSGT00940000158411 #26	ENSGT00940000158161 #27	ENSGT00940000158860 #28	ENSGT00940000156542 #29	ENSGT00940000160669 #31	ENSGT00400000022095.b #32	ENSGT00950000182981.b.f.b #33	ENSGT00390000015805 #34	ENSGT00940000158169 #35	ENSGT00940000157663 #36	ENSGT00940000154679
Australian saltwater crocodile	MODERN SPECIES	52	MTCH1 (ENSCPRG00005003292)	ENSCPRG00005003302	C6orf89 (ENSCPRG00005003304)	ENSCPRG00005003307	CDKN1A (ENSCPRG00005003310)	SRSF3 (ENSCPRG00005003315)	STK38 (ENSCPRG00005003323)	KCTD20 (ENSCPRG00005003333)	ETV7 (ENSCPRG00005003334)	ENSCPRG00005003338	ENSCPRG00005003355	ENSCPRG00005003373	ENSCPRG00005003381	KCNA3 (ENSCPRG00005003386) #20	KCNA2 (ENSCPRG00005003388) #21	KCNA10 (ENSCPRG00005003395) #22	ENSCPRG00005003399	ENSCPRG00005003405 #23	ENSCPRG00005003436 #23	ENSCPRG00005003505 #23	ENSCPRG00005003582 #23	ENSCPRG00005003601 #23	ENSCPRG00005003623 #23	PROK1 (ENSCPRG00005003688) #24	LAMTOR5 (ENSCPRG00005003693) #25	SLC16A4 (ENSCPRG00005003700) #26	KCNC4 (ENSCPRG00005003711) #28	SLC6A17 (ENSCPRG00005003714) #29	ALX3 (ENSCPRG00005003718) #31	STRIP1 (ENSCPRG00005003725) #32	AHCYL1 (ENSCPRG00005003766) #33
Aves	ANCESTRAL SPECIES	25	ENSGT00940000161251	ENSGT00390000000020.a	ENSGT00940000163908	ENSGT00390000014270	ENSGT00940000160379	ENSGT00940000159918.a.b	ENSGT00910000144115.a	ENSGT00970000193695	ENSGT00940000153544.a	ENSGT00390000007975.b	ENSGT00940000162211	ENSGT00940000154318.A.f	ENSGT00940000160828.b	ENSGT00940000160210 #20	ENSGT00940000158688 #21	ENSGT00940000159534 #22	ENSGT00940000162710 #23	ENSGT00940000161331 #24	ENSGT00390000006247 #25	ENSGT00940000158411 #26	ENSGT00940000158161 #27	ENSGT00940000158860 #28	ENSGT00940000156542 #29	ENSGT00940000160669 #31	ENSGT00400000022095.b #32	ENSGT00950000182981.b.f.b #33	ENSGT00390000015805 #34	ENSGT00940000158169 #35	ENSGT00940000157663 #36	ENSGT00940000154679	ENSGT00950000183011.d
Neognathae	ANCESTRAL SPECIES	24	ENSGT00390000000020.a	ENSGT00940000163908	ENSGT00390000014270	ENSGT00940000160379	ENSGT00940000159918.a.b	ENSGT00910000144115.a	ENSGT00970000193695	ENSGT00940000153544.a	ENSGT00390000007975.b	ENSGT00940000162211	ENSGT00940000154318.A.f	ENSGT00940000160828.b	ENSGT00940000160828.a	ENSGT00940000160210 #20	ENSGT00940000158688 #21	ENSGT00940000159534 #22	ENSGT00940000162710 #23	ENSGT00940000161331 #24	ENSGT00390000006247 #25	ENSGT00940000158411 #26	ENSGT00940000158161 #27	ENSGT00940000158860 #28	ENSGT00940000156542 #29	ENSGT00940000160669 #31	ENSGT00400000022095.b #32	ENSGT00950000182981.b.f.b #33	ENSGT00390000015805 #34	ENSGT00940000158169 #35	ENSGT00940000157663 #36	ENSGT00940000154679	ENSGT00950000183011.d
Galloanserae	ANCESTRAL SPECIES	28	ENSGT00940000161251	ENSGT00390000000020.a	ENSGT00940000163908	ENSGT00390000014270	ENSGT00940000160379	ENSGT00940000159918.a.b	ENSGT00910000144115.a	ENSGT00940000153544.a	ENSGT00390000007975.b	ENSGT00940000162211	ENSGT00940000154318.A.f	ENSGT00940000160828.b	ENSGT00940000160828.a	ENSGT00940000160210 #20	ENSGT00940000158688 #21	ENSGT00940000159534 #22	ENSGT00940000162710.k #23	ENSGT00940000161331 #24	ENSGT00390000006247 #25	ENSGT00940000158411 #26	ENSGT00940000158161 #27	ENSGT00940000158860 #28	ENSGT00940000156542 #29	ENSGT00940000160669 #31	ENSGT00400000022095.b #32	ENSGT00950000182981.b.f.b #33	ENSGT00390000015805 #34	ENSGT00940000158169 #35	ENSGT00940000157663 #36	ENSGT00940000154679	ENSGT00950000183011.d
Anatidae	ANCESTRAL SPECIES	73	ENSGT00940000161251	ENSGT00390000000020.a	ENSGT00940000163908	ENSGT00390000014270	ENSGT00940000160379	ENSGT00940000159918.a.b	ENSGT00940000165794	ENSGT00970000193695	ENSGT00940000153544.a	ENSGT00390000007975.b	ENSGT00940000162211	ENSGT00940000160828.b	ENSGT00940000160828.a	ENSGT00940000160210 #20	ENSGT00940000158688 #21	ENSGT00940000159534 #22	ENSGT00940000162710.k #23	ENSGT00940000161331 #24	ENSGT00390000006247 #25	ENSGT00940000158411 #26	ENSGT00940000158161 #27	ENSGT00940000158860 #28	ENSGT00940000156542 #29	ENSGT00940000160669 #31	ENSGT00400000022095.b #32	ENSGT00950000182981.b.f.b #33	ENSGT00390000015805 #34	ENSGT00940000158169 #35	ENSGT00940000154679	ENSGT00950000183011.d	ENSGT00940000158399
Pink-footed goose	MODERN SPECIES	309	FGD2 (ENSABRG00000005468)	MTCH1 (ENSABRG00000005498)	ENSABRG00000005513	C6orf89 (ENSABRG00000005523)	ENSABRG00000005532	ENSABRG00000005557	SRSF3 (ENSABRG00000005563)	ENSABRG00000005578	STK38 (ENSABRG00000005587)	KCTD20 (ENSABRG00000005597)	ETV7 (ENSABRG00000005606)	ENSABRG00000005626	ENSABRG00000005664	KCNA3 (ENSABRG00000005676) #20	KCNA2 (ENSABRG00000005684) #21	KCNA10 (ENSABRG00000005693) #22	ENSABRG00000005694 #23	PROK1 (ENSABRG00000005707) #24	LAMTOR5 (ENSABRG00000005717) #25	SLC16A4 (ENSABRG00000005721) #26	KCNC4 (ENSABRG00000005730) #28	SLC6A17 (ENSABRG00000005733) #29	ALX3 (ENSABRG00000005752) #31	STRIP1 (ENSABRG00000005766) #32	AHCYL1 (ENSABRG00000005781) #33	ENSABRG00000005800 #34	EPS8L3 (ENSABRG00000005819) #35	GSTM4 (ENSABRG00000005839)	AMPD2 (ENSABRG00000005956)	GNAT2 (ENSABRG00000006004)	GNAI3 (ENSABRG00000006014)
Duck	MODERN SPECIES	18	ENSAPLG00000018905	MTCH1 (ENSAPLG00000012793)	ENSAPLG00000013282	ENSAPLG00000013324	ENSAPLG00000023681	CDKN1A (ENSAPLG00000028937)	ENSAPLG00000013776	ENSAPLG00000025294	STK38 (ENSAPLG00000013800)	KCTD20 (ENSAPLG00000014389)	ENSAPLG00000014526	ENSAPLG00000014675	ENSAPLG00000014679	KCNA3 (ENSAPLG00000020383) #20	KCNA2 (ENSAPLG00000001342) #21	KCNA10 (ENSAPLG00000001337) #22	ENSAPLG00000015831 #23	PROK1 (ENSAPLG00000015823) #24	LAMTOR5 (ENSAPLG00000028465) #25	SLC16A4 (ENSAPLG00000015458) #26	ENSAPLG00000023711 #27	KCNC4 (ENSAPLG00000015421) #28	SLC6A17 (ENSAPLG00000015200) #29	STRIP1 (ENSAPLG00000002822) #32	AHCYL1 (ENSAPLG00000003315) #33	GNAT2 (ENSAPLG00000028730)	GNAI3 (ENSAPLG00000023137)	GPR61 (ENSAPLG00000028778)
Phasianidae	ANCESTRAL SPECIES	22	ENSGT00390000012818.o.b	ENSGT00390000000020.a	ENSGT00940000163908	ENSGT00390000014270	ENSGT00940000160379	ENSGT00940000159918.a.b	ENSGT00910000144115.a	ENSGT00940000153544.a	ENSGT00390000007975.b	ENSGT00940000162211	ENSGT00940000154318.A.f	ENSGT00940000160828.b	ENSGT00940000160828.a	ENSGT00940000160210 #20	ENSGT00940000158688 #21	ENSGT00940000159534 #22	ENSGT00940000162710.k #23	ENSGT00940000161331 #24	ENSGT00390000006247 #25	ENSGT00940000158411 #26	ENSGT00940000158161 #27	ENSGT00940000158860 #28	ENSGT00940000156542 #29	ENSGT00940000160669 #31	ENSGT00400000022095.b #32	ENSGT00950000182981.b.f.b #33	ENSGT00390000015805 #34	ENSGT00940000158169 #35	ENSGT00940000157663 #36	ENSGT00940000154679	ENSGT00950000183011.d
Phasianidae_b	ANCESTRAL SPECIES	22	ENSGT00390000012818.p	ENSGT00390000000020.a	ENSGT00940000163908	ENSGT00390000014270	ENSGT00940000160379	ENSGT00940000159918.a.b	ENSGT00910000144115.a	ENSGT00940000153544.a.e	ENSGT00390000007975.b	ENSGT00940000162211	ENSGT00940000154318.A.f	ENSGT00940000160828.b	ENSGT00940000160828.a	ENSGT00940000160210 #20	ENSGT00940000158688 #21	ENSGT00940000159534 #22	ENSGT00940000162710.k #23	ENSGT00940000161331 #24	ENSGT00390000006247 #25	ENSGT00940000158411 #26	ENSGT00940000158161 #27	ENSGT00940000158860 #28	ENSGT00940000156542 #29	ENSGT00940000160669 #31	ENSGT00400000022095.b #32	ENSGT00950000182981.b.f.b #33	ENSGT00390000015805 #34	ENSGT00940000158169 #35	ENSGT00940000157663 #36	ENSGT00940000154679	ENSGT00950000183011.d
Chicken	MODERN SPECIES	18	MTCH1 (ENSGALG00010025696)	SNRPE (ENSGALG00010025661)	ENSGALG00010025644	C6orf89 (ENSGALG00010025637)	ENSGALG00010025623	CDKN1A (ENSGALG00010025613)	SRSF3 (ENSGALG00010025571)	STK38 (ENSGALG00010024737)	KCTD20 (ENSGALG00010024671)	ETV7 (ENSGALG00010024643)	ENSGALG00010024617	ENSGALG00010024603	ENSGALG00010024584	KCNA3 (ENSGALG00010024571) #20	KCNA2 (ENSGALG00010027866) #21	KCNA10 (ENSGALG00010024550) #22	PGA3 (ENSGALG00010027352) #23	LAMTOR5 (ENSGALG00010027339) #25	PROK1 (ENSGALG00010027333) #24	SLC16A4 (ENSGALG00010027331) #26	RBM15 (ENSGALG00010027328) #27	KCNC4 (ENSGALG00010027213) #28	SLC6A17 (ENSGALG00010025559) #29	ALX3 (ENSGALG00010024483) #31	STRIP1 (ENSGALG00010024474) #32	AHCYL1 (ENSGALG00010024459) #33	CSF1 (ENSGALG00010027734) #34	EPS8L3 (ENSGALG00010027729) #35	GSTM3 (ENSGALG00010027915) #36	GSTM2 (ENSGALG00010027727)	AMPD2 (ENSGALG00010027923)
Turkey	MODERN SPECIES	20	ENSMGAG00000009782	ENSMGAG00000010170	ENSMGAG00000010140	ENSMGAG00000010124	ENSMGAG00000020405	ENSMGAG00000010137	ENSMGAG00000017990	ENSMGAG00000018095 #35	AHCYL1 (ENSMGAG00000002223) #33	ENSMGAG00000002286 #31	ENSMGAG00000002248 #32	ENSMGAG00000010173	SLC6A17 (ENSMGAG00000002298) #29	ENSMGAG00000001761 #28	ENSMGAG00000018807 #27	KCNA10 (ENSMGAG00000015652) #22	ENSMGAG00000002369 #23	PROK1 (ENSMGAG00000021894) #24	ENSMGAG00000002361 #25	SLC16A4 (ENSMGAG00000002330) #26	ENSMGAG00000015660 #20	ENSMGAG00000002482	ENSMGAG00000002473	ETV7 (ENSMGAG00000002426)	ENSMGAG00000020579	ENSMGAG00000002411	ENSMGAG00000019226	ENSMGAG00000016795	ENSMGAG00000002503	ENSMGAG00000022605	ENSMGAG00000018918
Neognathae_b	ANCESTRAL SPECIES	24	ENSGT00390000000020.a	ENSGT00940000163908	ENSGT00390000014270	ENSGT00940000160379	ENSGT00940000159918.a.b	ENSGT00910000144115.a	ENSGT00970000193695	ENSGT00940000153544.a	ENSGT00390000007975.b	ENSGT00940000162211	ENSGT00940000154318.A.f	ENSGT00940000160828.b	ENSGT00940000160828.a	ENSGT00940000160210 #20	ENSGT00940000158688 #21	ENSGT00940000159534 #22	ENSGT00940000162710 #23	ENSGT00940000161331 #24	ENSGT00390000006247 #25	ENSGT00940000158411 #26	ENSGT00940000158161 #27	ENSGT00940000158860 #28	ENSGT00940000156542 #29	ENSGT00940000160669 #31	ENSGT00400000022095.b #32	ENSGT00950000182981.b.f.b #33	ENSGT00390000015805 #34	ENSGT00940000158169 #35	ENSGT00940000157663 #36	ENSGT00940000154679	ENSGT00950000183011.d
Neognathae_c	ANCESTRAL SPECIES	27	ENSGT00940000161251	ENSGT00390000000020.a	ENSGT00940000163908	ENSGT00390000014270	ENSGT00940000160379	ENSGT00940000159918.a.b	ENSGT00910000144115.a	ENSGT00970000193695	ENSGT00940000153544.a	ENSGT00390000007975.b	ENSGT00940000162211	ENSGT00940000154318.A.f	ENSGT00940000160828.b	ENSGT00940000160210 #20	ENSGT00940000158688 #21	ENSGT00940000159534 #22	ENSGT00940000162710 #23	ENSGT00940000161331 #24	ENSGT00390000006247 #25	ENSGT00940000158411 #26	ENSGT00940000158161 #27	ENSGT00940000158860 #28	ENSGT00940000156542 #29	ENSGT00940000160669 #31	ENSGT00400000022095.b #32	ENSGT00950000182981.b.f.b #33	ENSGT00390000015805 #34	ENSGT00940000158169 #35	ENSGT00940000157663 #36	ENSGT00940000154679	ENSGT00950000183011.d
Golden eagle	MODERN SPECIES	16	TBC1D22B (ENSACCG00020015326)	PIM1 (ENSACCG00020015351)	FGD2 (ENSACCG00020015370)	MTCH1 (ENSACCG00020015394)	ENSACCG00020015423	C6orf89 (ENSACCG00020015438)	ENSACCG00020015459	ENSACCG00020015472	SRSF3 (ENSACCG00020015489)	STK38 (ENSACCG00020015503)	KCTD20 (ENSACCG00020015539)	ETV7 (ENSACCG00020015560)	ENSACCG00020015605	KCNA3 (ENSACCG00020015627) #20	KCNA2 (ENSACCG00020015646) #21	KCNA10 (ENSACCG00020015654) #22	ENSACCG00020015670 #23	PROK1 (ENSACCG00020015734) #24	LAMTOR5 (ENSACCG00020015747) #25	SLC16A4 (ENSACCG00020015754) #26	RBM15 (ENSACCG00020015770) #27	KCNC4 (ENSACCG00020015784) #28	SLC6A17 (ENSACCG00020015802) #29	ALX3 (ENSACCG00020015816) #31	STRIP1 (ENSACCG00020015842) #32	AHCYL1 (ENSACCG00020015869) #33	ENSACCG00020015891 #34	EPS8L3 (ENSACCG00020015934) #35	GSTM3 (ENSACCG00020008534) #36	GSTM4 (ENSACCG00020008560)	AMPD2 (ENSACCG00020008588)
Kakapo	MODERN SPECIES	30	FGD2 (ENSSHBG00005016705)	MTCH1 (ENSSHBG00005016715)	ENSSHBG00005016721	C6orf89 (ENSSHBG00005016734)	ENSSHBG00005016740	CDKN1A (ENSSHBG00005016748)	SRSF3 (ENSSHBG00005016753)	ENSSHBG00005016758	STK38 (ENSSHBG00005016769)	KCTD20 (ENSSHBG00005016777)	ETV7 (ENSSHBG00005016790)	ENSSHBG00005016796	ENSSHBG00005016812	KCNA3 (ENSSHBG00005016901) #20	KCNA2 (ENSSHBG00005016905) #21	KCNA10 (ENSSHBG00005016913) #22	PROK1 (ENSSHBG00005016919) #24	LAMTOR5 (ENSSHBG00005016936) #25	SLC16A4 (ENSSHBG00005016944) #26	ENSSHBG00005016953 #27	KCNC4 (ENSSHBG00005016960) #28	SLC6A17 (ENSSHBG00005016967) #29	ALX3 (ENSSHBG00005016973) #31	STRIP1 (ENSSHBG00005016990) #32	AHCYL1 (ENSSHBG00005017014) #33	ENSSHBG00005017017 #34	GSTM3 (ENSSHBG00005017028) #36	ELF3 (ENSSHBG00005017038)	GPR37L1 (ENSSHBG00005017047)	ARL8A (ENSSHBG00005017054)	ENSSHBG00005017058
Passeriformes	ANCESTRAL SPECIES	21	ENSGT00940000163908.e.b	ENSGT00940000163908.f	ENSGT00390000014270	ENSGT00940000160379	ENSGT00940000159918.a.b	ENSGT00910000144115.a	ENSGT00970000193695	ENSGT00940000153544.a	ENSGT00390000007975.b	ENSGT00940000162211	ENSGT00940000154318.A.f	ENSGT00940000160828.b	ENSGT00940000160828.a	ENSGT00940000160210 #20	ENSGT00940000158688 #21	ENSGT00940000159534 #22	ENSGT00940000162710 #23	ENSGT00390000006247 #25	ENSGT00940000158411 #26	ENSGT00940000158161.d #27	ENSGT00940000158860 #28	ENSGT00940000156542 #29	ENSGT00940000160669 #31	ENSGT00400000022095.b #32	ENSGT00950000182981.b.f.b #33	ENSGT00390000015805 #34	ENSGT00940000158169 #35	ENSGT00940000157663 #36	ENSGT00940000154679	ENSGT00950000183011.d	ENSGT00940000158399
Great tit	MODERN SPECIES	19	MTCH1 (ENSPMJG00000011973)	ENSPMJG00000011970	C6orf89 (ENSPMJG00000011969)	ENSPMJG00000011968	ENSPMJG00000011967	SRSF3 (ENSPMJG00000011965)	ENSPMJG00000011964	STK38 (ENSPMJG00000011963)	KCTD20 (ENSPMJG00000011962)	ETV7 (ENSPMJG00000011961)	ENSPMJG00000011960	ENSPMJG00000011959	ENSPMJG00000011958	KCNA3 (ENSPMJG00000011957) #20	KCNA2 (ENSPMJG00000011956) #21	KCNA10 (ENSPMJG00000011955) #22	ENSPMJG00000011954 #23	ENSPMJG00000011952 #25	SLC16A4 (ENSPMJG00000011951) #26	RBM15 (ENSPMJG00000011950) #27	KCNC4 (ENSPMJG00000011948) #28	SLC6A17 (ENSPMJG00000011947) #29	ALX3 (ENSPMJG00000011945) #31	STRIP1 (ENSPMJG00000011944) #32	AHCYL1 (ENSPMJG00000011943) #33	ENSPMJG00000011942 #34	ENSPMJG00000011941 #35	ENSPMJG00000011940	AMPD2 (ENSPMJG00000011799)	GNAT2 (ENSPMJG00000011798)	GNAI3 (ENSPMJG00000011797)
Passeriformes_d	ANCESTRAL SPECIES	21	ENSGT00390000000020.a	ENSGT00940000163908.f	ENSGT00390000014270	ENSGT00940000160379	ENSGT00940000159918.a.b	ENSGT00910000144115.a	ENSGT00970000193695	ENSGT00940000153544.a	ENSGT00390000007975.b	ENSGT00940000162211	ENSGT00940000154318.A.f	ENSGT00940000160828.b	ENSGT00940000160828.a	ENSGT00940000160210 #20	ENSGT00940000158688 #21	ENSGT00940000159534 #22	ENSGT00940000162710 #23	ENSGT00390000006247 #25	ENSGT00940000158411 #26	ENSGT00940000158161.d #27	ENSGT00940000158860 #28	ENSGT00940000156542 #29	ENSGT00940000160669 #31	ENSGT00400000022095.b #32	ENSGT00950000182981.b.f.b #33	ENSGT00390000015805 #34	ENSGT00940000158169 #35	ENSGT00940000157663 #36	ENSGT00940000154679	ENSGT00950000183011.d	ENSGT00940000158399
Flycatcher	MODERN SPECIES	18	FGD2 (ENSFALG00000003341)	MTCH1 (ENSFALG00000028215)	ENSFALG00000023248	C6orf89 (ENSFALG00000003285)	ENSFALG00000003264	CDKN1A (ENSFALG00000003246)	SRSF3 (ENSFALG00000003234)	ENSFALG00000003220	STK38 (ENSFALG00000003210)	KCTD20 (ENSFALG00000003197)	ETV7 (ENSFALG00000003183)	ENSFALG00000003168	ENSFALG00000003157	KCNA3 (ENSFALG00000003133) #20	KCNA2 (ENSFALG00000014636) #21	KCNA10 (ENSFALG00000029005) #22	ENSFALG00000003096 #23	LAMTOR5 (ENSFALG00000003081) #25	SLC16A4 (ENSFALG00000003072) #26	RBM15 (ENSFALG00000003062) #27	KCNC4 (ENSFALG00000003048) #28	SLC6A17 (ENSFALG00000026441) #29	STRIP1 (ENSFALG00000003018) #32	ENSFALG00000024374 #31	AHCYL1 (ENSFALG00000002993) #33	ENSFALG00000002990 #34	EPS8L3 (ENSFALG00000002971) #35	ENSFALG00000026420	ENSFALG00000002939 #36	ENSFALG00000028528	AMPD2 (ENSFALG00000002925)
Passeriformes_g	ANCESTRAL SPECIES	24	ENSGT00940000161251	ENSGT00390000000020.a	ENSGT00940000163908.f	ENSGT00390000014270	ENSGT00940000160379	ENSGT00940000159918.a.b	ENSGT00910000144115.a	ENSGT00940000153544.a	ENSGT00390000007975.b	ENSGT00940000162211	ENSGT00940000154318.A.f	ENSGT00940000160828.b	ENSGT00940000160828.a	ENSGT00940000160210 #20	ENSGT00940000158688 #21	ENSGT00940000159534 #22	ENSGT00940000162710 #23	ENSGT00390000006247 #25	ENSGT00940000158411 #26	ENSGT00940000158161.d #27	ENSGT00940000158860 #28	ENSGT00940000156542 #29	ENSGT00940000160669 #31	ENSGT00400000022095.b #32	ENSGT00950000182981.b.f.b.g #33	ENSGT00390000015805 #34	ENSGT00940000158169 #35	ENSGT00940000157663 #36	ENSGT00950000183011.d	ENSGT00940000158399	ENSGT00940000153567.b.a.a
Medium ground finch	MODERN SPECIES	128														KCNA3 (ENSGFOG00000012646) #20	KCNA2 (ENSGFOG00000012644) #21	KCNA10 (ENSGFOG00000012642) #22	ENSGFOG00000012638 #23	LAMTOR5 (ENSGFOG00000012635) #25	SLC16A4 (ENSGFOG00000012631) #26	ENSGFOG00000012628 #27	KCNC4 (ENSGFOG00000012621) #28	SLC6A17 (ENSGFOG00000012615) #29	ALX3 (ENSGFOG00000012607) #31	STRIP1 (ENSGFOG00000012582) #32	AHCYL1 (ENSGFOG00000012557) #33	ENSGFOG00000012550 #34	GSTM3 (ENSGFOG00000012547) #36	AMPD2 (ENSGFOG00000012541)	GNAT2 (ENSGFOG00000012532)	GNAI3 (ENSGFOG00000012525)	ATXN7L2 (ENSGFOG00000012521)
Passeroidea	ANCESTRAL SPECIES	24	ENSGT00940000161251	ENSGT00390000000020.a	ENSGT00940000163908.e.b	ENSGT00940000163908.e.a	ENSGT00390000014270	ENSGT00940000160379	ENSGT00970000193695	ENSGT00940000153544.a	ENSGT00390000007975.b	ENSGT00940000162211	ENSGT00940000154318.A.f	ENSGT00940000160828.b	ENSGT00940000160828.a	ENSGT00940000160210 #20	ENSGT00940000158688 #21	ENSGT00940000159534 #22	ENSGT00940000162710 #23	ENSGT00390000006247 #25	ENSGT00940000158411 #26	ENSGT00940000158161.c #27	ENSGT00940000158161.d #27	ENSGT00940000158860 #28	ENSGT00940000156542 #29	ENSGT00940000160669 #31	ENSGT00400000022095.b #32	ENSGT00950000182981.b.f.b.g #33	ENSGT00390000015805 #34	ENSGT00940000158169 #35	ENSGT00940000157663 #36	ENSGT00950000183011.d	ENSGT00940000158399
Common canary	MODERN SPECIES	46	NGF (ENSSCAG00000013537)	ENSSCAG00000013543	FGD2 (ENSSCAG00000013553)	MTCH1 (ENSSCAG00000013566)	ENSSCAG00000013575	ENSSCAG00000013582	C6orf89 (ENSSCAG00000013586)	ENSSCAG00000013594	STK38 (ENSSCAG00000013600)	KCTD20 (ENSSCAG00000013604)	ETV7 (ENSSCAG00000013607)	ENSSCAG00000013610	ENSSCAG00000013614	KCNA3 (ENSSCAG00000013617) #20	KCNA2 (ENSSCAG00000013620) #21	KCNA10 (ENSSCAG00000013623) #22	ENSSCAG00000013640 #23	LAMTOR5 (ENSSCAG00000013732) #25	SLC16A4 (ENSSCAG00000013736) #26	ENSSCAG00000013742 #27	ENSSCAG00000000169 #27	KCNC4 (ENSSCAG00000000194) #28	SLC6A17 (ENSSCAG00000000252) #29	ALX3 (ENSSCAG00000000327) #31	STRIP1 (ENSSCAG00000000335) #32	AHCYL1 (ENSSCAG00000000389) #33	ENSSCAG00000000553 #34	ENSSCAG00000000570 #35	GSTM3 (ENSSCAG00000000626) #36	ENSSCAG00000000643	AMPD2 (ENSSCAG00000000679)
Zebra finch	MODERN SPECIES	19	MTCH1 (ENSTGUG00000000939)	ENSTGUG00000000937	ENSTGUG00000027197	ENSTGUG00000000936	C6orf89 (ENSTGUG00000000933)	ENSTGUG00000026382	SRSF3 (ENSTGUG00000000928)	ENSTGUG00000026443	STK38 (ENSTGUG00000000925)	KCTD20 (ENSTGUG00000000921)	ETV7 (ENSTGUG00000000916)	ENSTGUG00000000909	ENSTGUG00000000908	KCNA3 (ENSTGUG00000023126) #20	KCNA2 (ENSTGUG00000020000) #21	KCNA10 (ENSTGUG00000000862) #22	ENSTGUG00000000863 #23	LAMTOR5 (ENSTGUG00000026078) #25	ENSTGUG00000022846	SLC16A4 (ENSTGUG00000000891) #26	KCNC4 (ENSTGUG00000000883) #28	SLC6A17 (ENSTGUG00000000875) #29	ALX3 (ENSTGUG00000021411) #31	STRIP1 (ENSTGUG00000000846) #32	ENSTGUG00000026537 #33	ENSTGUG00000028039 #34	EPS8L3 (ENSTGUG00000026316) #35	GSTM3 (ENSTGUG00000023165) #36	AMPD2 (ENSTGUG00000027471)	ENSTGUG00000000826 #33	GNAT2 (ENSTGUG00000001122)
Anura	ANCESTRAL SPECIES	258									ENSGT00970000193609	ENSGT00940000153544.a	ENSGT00390000007975.b	ENSGT00940000160828	ENSGT00550000074828.b	ENSGT00940000160210 #20	ENSGT00940000158688 #21	ENSGT00940000159534 #22	ENSGT00390000007725.A.b	ENSGT00940000157504	ENSGT00940000158152
Leishan spiny toad	MODERN SPECIES	5	ENSLLEG00000000885	ENSLLEG00000000922	ENSLLEG00000000988	ENSLLEG00000001002	ENSLLEG00000001019	STK38 (ENSLLEG00000001040)	ENSLLEG00000001119	ENSLLEG00000001135	ENSLLEG00000001164	ENSLLEG00000001195	KCNA3 (ENSLLEG00000001209) #20	ENSLLEG00000001218	ENSLLEG00000001223	KCNA2 (ENSLLEG00000001231) #21	ENSLLEG00000001243	KCNA10 (ENSLLEG00000001250) #22	NGF (ENSLLEG00000001266)	ENSLLEG00000001297	TSPAN2 (ENSLLEG00000001363)	ENSLLEG00000001374	ENSLLEG00000001383	ENSLLEG00000001394	TSHB (ENSLLEG00000001421)	ENSLLEG00000001433	SRSF3 (ENSLLEG00000001460)	ADORA1 (ENSLLEG00000001482)	ENSLLEG00000001492	MYOG (ENSLLEG00000001505)	ENSLLEG00000001513	TMEM183A (ENSLLEG00000001528)	ENSLLEG00000001576
Frog	MODERN SPECIES	2	ENSXETG00000048820	ENSXETG00000040330	ENSXETG00000035808	ENSXETG00000035681	ENSXETG00000031553	ENSXETG00000008928	plxna2 (ENSXETG00000017724)	ENSXETG00000031415	XB5843130 [provisional] (ENSXETG00000017748)	ENSXETG00000030824	ENSXETG00000036623	ENSXETG00000046347	ENSXETG00000046287	kcna3 (ENSXETG00000017753) #20	kcna2 (ENSXETG00000044348) #21	kcna10 (ENSXETG00000017761) #22	ngf (ENSXETG00000016618)	ENSXETG00000035060	tspan2 (ENSXETG00000040906)	ENSXETG00000034828	stk38 (ENSXETG00000016625)	XB5809687 [provisional] (ENSXETG00000032692)	cd53 (ENSXETG00000015353) #19	cry4 (ENSXETG00000015354)	ENSXETG00000041668	tshb (ENSXETG00000041131)	slc25a22l (ENSXETG00000015362)	sycp1 (ENSXETG00000048754)	nr1h5 (ENSXETG00000021443)	sike1 (ENSXETG00000021446)	ENSXETG00000034849
Coelacanth	MODERN SPECIES	237	cry3b (ENSLACG00000010538)	ENSLACG00000009938	ENSLACG00000009871	ENSLACG00000009583 #19	ENSLACG00000009026	CDKN1A (ENSLACG00000008728)	SRSF3 (ENSLACG00000008131)	STK38 (ENSLACG00000007548)	KCTD20 (ENSLACG00000006905)	zgc:194242 (ENSLACG00000006748)	ETV7 (ENSLACG00000006370)	rplp2 (ENSLACG00000006058)	ENSLACG00000005569	KCNA3 (ENSLACG00000004165) #20	KCNA2 (ENSLACG00000003393) #21	KCNA10 (ENSLACG00000001741) #22
Actinopterygii	ANCESTRAL SPECIES	36	ENSGT00950000182959.b.b	ENSGT01030000234555.a.a.b.a.a	ENSGT00950000182959.a.b.b.b	ENSGT01050000244900.a.a.a.a.a	ENSGT00390000009310	ENSGT00940000166133	ENSGT00390000003368	ENSGT00970000193609	ENSGT00940000165906	ENSGT00940000158152	ENSGT00940000164224	ENSGT00940000157504	ENSGT00390000007725.A.b	ENSGT00940000160210 #20	ENSGT00940000158688 #21	ENSGT00940000159534 #22	ENSGT00550000074828.b	ENSGT00940000162211	ENSGT00390000010372	ENSGT00940000157365	ENSGT00940000159939	ENSGT01030000234555.a.a.b.a.b.b	ENSGT00940000155067.b.b	ENSGT00390000011648.b	ENSGT00390000001969.a	ENSGT00940000160958	ENSGT00940000156496	ENSGT00940000158791
Neopterygii	ANCESTRAL SPECIES	79	ENSGT00940000158175	ENSGT01030000234555.a.a.b.a.a	ENSGT00950000182959.a.b.b.b	ENSGT01050000244900.a.a.a.a.a	ENSGT00390000009310	ENSGT00940000166133	ENSGT00390000003368	ENSGT00970000193609	ENSGT00940000165906	ENSGT00940000158152	ENSGT00940000164224	ENSGT00940000157504	ENSGT00390000007725.A.b	ENSGT00940000160210 #20	ENSGT00940000158688 #21	ENSGT00940000159534 #22	ENSGT00550000074828.b	ENSGT00940000162211	ENSGT00390000010372	ENSGT00940000157365	ENSGT00940000159939	ENSGT01030000234555.a.a.b.a.b.b	ENSGT00940000155067.b.b	ENSGT01030000234555.a.a.b.a.b.a	ENSGT00940000158771	ENSGT00950000182956.b.b.b.e.a	ENSGT00390000009166	ENSGT00940000158040	ENSGT00940000156637	ENSGT00940000156777	ENSGT00440000039564.a.a
Osteoglossocephalai	DUPLICATION
Osteoglossocephalai	ANCESTRAL SPECIES	63	ENSGT00430000031071	ENSGT00940000154479.a.a.b	ENSGT00940000159379	ENSGT00940000153372.A.f	ENSGT00980000199284	ENSGT00940000153567.a.a.b.b.b	ENSGT00940000155057.wb	ENSGT00390000006367.c	ENSGT00530000063113.A	ENSGT00530000064192	ENSGT00940000158027	ENSGT00940000158848	ENSGT00940000153438.b	ENSGT00390000006485.c.tc	ENSGT00390000006760	ENSGT00940000159534.e #22	ENSGT00940000155662	ENSGT00940000158662	ENSGT00390000013629	ENSGT00390000007681.b.a.b	ENSGT00940000153185.a.a.a	ENSGT00390000011355	ENSGT00390000002524	ENSGT00940000158018	ENSGT00940000165155	ENSGT00950000183042.a.b.a	ENSGT00940000159167	ENSGT00940000160180	ENSGT00940000154917	ENSGT00940000160733	ENSGT00940000164702.a
Clupeocephala	ANCESTRAL SPECIES	90							ENSGT00940000158152.a.b	ENSGT00940000164224.b	ENSGT00940000157504.c.a	ENSGT00940000157025	ENSGT00940000163962	ENSGT00940000157504.d	ENSGT00390000007725.A.b.d	ENSGT00940000160210.d.a #20	ENSGT00940000158688.d #21	ENSGT00940000159534.e #22	ENSGT00940000155662.f	ENSGT00940000160210.d.b #20	ENSGT00940000158688.c #21	ENSGT00940000159534.f #22	ENSGT00550000074828.b	ENSGT01030000234555.a.a.b.a.b.b	ENSGT01030000234555.a.a.b.a.b.a.c	ENSGT00940000163467.a.b.b.a.b	ENSGT00940000160828	ENSGT00940000162211	ENSGT00390000010372	ENSGT00940000157365	ENSGT00940000159939	ENSGT00940000155067.b.b	ENSGT01030000234555.a.a.b.a.b.a.d
Otomorpha	ANCESTRAL SPECIES	157								ENSGT00940000157025	ENSGT00940000167901	ENSGT00940000158152.a.b	ENSGT00940000164224.b	ENSGT00940000157504.c.a	ENSGT00390000007725.A.b.d	ENSGT00940000160210.d.a #20	ENSGT00940000158688.d #21	ENSGT00940000159534.e #22	ENSGT00940000155662.f	ENSGT00940000162211	ENSGT00390000010372	ENSGT00940000157365	ENSGT00940000159939	ENSGT00940000155067.b.b	ENSGT01030000234555.a.a.b.a.b.a.d	ENSGT00390000009166.a	ENSGT00940000156735.d	ENSGT00940000154709.a.b.a.b	ENSGT00730000112095	ENSGT01030000234588.a.a.a.b	ENSGT00440000039564.a.a	ENSGT00940000156777.d	ENSGT00940000156637.a
Clupeiformes	ANCESTRAL SPECIES	21	ENSGT00950000182872.f.a.a.a.a	ENSGT00940000159233	ENSGT00940000158422.b	ENSGT01070000253775.a.d.a.b.b.h.a	ENSGT00940000164714	ENSGT00390000014570.b	ENSGT00940000164203	ENSGT00940000157025	ENSGT00940000167901	ENSGT00940000158152.a.b	ENSGT00940000164224.b	ENSGT00940000157504.c.a	ENSGT00390000007725.A.b.d	ENSGT00940000160210.d.a #20	ENSGT00940000158688.d #21	ENSGT00940000159534.e #22	ENSGT00940000155662.f	ENSGT00940000162211	ENSGT00390000010372	ENSGT00940000157365	ENSGT00940000159939	ENSGT00940000155067.b.b	ENSGT01030000234555.a.a.b.a.b.a.d	ENSGT00940000156777.d	ENSGT00940000156637.a	ENSGT00940000158040.c	ENSGT00940000165428.c.a	ENSGT00940000157586.f	ENSGT00940000166065.b	ENSGT00390000013981	ENSGT00940000160123.e.a
Denticle herring	MODERN SPECIES	1	ndrg3b (ENSDCDG00000014534)	sla2b (ENSDCDG00000016114)	edem2 (ENSDCDG00000016117)	SLC26A6 (ENSDCDG00000016176)	ENSDCDG00000016944	p4htma (ENSDCDG00000017834)	ENSDCDG00000017837	ap4b1 (ENSDCDG00000017839)	zgc:101663 (ENSDCDG00000017842)	TSHB (ENSDCDG00000017846)	slc25a55b (ENSDCDG00000017850)	ENSDCDG00000017856	ngfa (ENSDCDG00000017860)	KCNA3 (ENSDCDG00000017864) #20	kcna2b (ENSDCDG00000017867) #21	KCNA10 (ENSDCDG00000017870) #22	ENSDCDG00000017874	etv7 (ENSDCDG00000017877)	zgc:194242 (ENSDCDG00000017886)	ube2t (ENSDCDG00000017888)	LGR6 (ENSDCDG00000017890)	ENSDCDG00000017892	ADORA3 (ENSDCDG00000017893)	ENSDCDG00000017895	TEAD3 (ENSDCDG00000017900)	smpd2a (ENSDCDG00000018082)	ENSDCDG00000018087	tnnt2a (ENSDCDG00000018185)	ENSDCDG00000018197	DNAH12 (ENSDCDG00000018209)	slmapb (ENSDCDG00000018249)
Atlantic herring	MODERN SPECIES	20	ENSCHAG00000024987	ENSCHAG00000025079	ENSCHAG00000025279	p4htma (ENSCHAG00000025995)	ENSCHAG00000026002	ap4b1 (ENSCHAG00000026009)	phpt1 (ENSCHAG00000026025)	ENSCHAG00000026028	TSHB (ENSCHAG00000026032)	TSHB (ENSCHAG00000026064)	ENSCHAG00000026076	ENSCHAG00000026079	ngfa (ENSCHAG00000026081)	rab1ab (ENSCHAG00000026087)	KCNA3 (ENSCHAG00000026091) #20	KCNA10 (ENSCHAG00000026098) #22	ENSCHAG00000000702	etv7 (ENSCHAG00000001036)	zgc:194242 (ENSCHAG00000001069)	ENSCHAG00000001088	ube2t (ENSCHAG00000001110)	LGR6 (ENSCHAG00000001142)	ENSCHAG00000001181	ENSCHAG00000001195	ENSCHAG00000001237	TEAD3 (ENSCHAG00000001518)	tnnt2a (ENSCHAG00000001562)	NAV1 (ENSCHAG00000001738)	mybpha (ENSCHAG00000005301)	ENSCHAG00000005698	ENSCHAG00000005721
Otophysi	ANCESTRAL SPECIES	190	ENSGT00980000198821	ENSGT00940000163428.a.a.b	ENSGT00940000159065.a	ENSGT00950000183062.a.b.b.a	ENSGT00940000155806.c.a	ENSGT00390000013228	ENSGT00600000084428.a	ENSGT00940000157025	ENSGT00940000167901	ENSGT00940000158152.a.b	ENSGT00940000164224.b	ENSGT00940000157504.c.a	ENSGT00390000007725.A.b.d	ENSGT00940000160210.d.a #20	ENSGT00940000158688.d #21	ENSGT00940000159534.e #22	ENSGT00940000155662.f	ENSGT00940000162211	ENSGT00390000010372	ENSGT00940000157365	ENSGT00940000159939	ENSGT00940000155067.b.b	ENSGT01030000234555.a.a.b.a.b.a.d	ENSGT00390000009166.a	ENSGT00940000156735.d	ENSGT00940000154709.a.b.a.b	ENSGT00730000112095	ENSGT01030000234588.a.a.a.b	ENSGT00440000039564.a.a	ENSGT00940000156777.d	ENSGT00940000156637.a
Characiphysae	ANCESTRAL SPECIES	73	ENSGT00940000163428.a.a.b	ENSGT00940000159065.a	ENSGT00950000183062.a.b.b.a	ENSGT00940000155806.c.a	ENSGT00390000013228	ENSGT00600000084428.a	ENSGT00940000157025	ENSGT00940000167901	ENSGT00940000158152.a.b	ENSGT00940000164224.b	ENSGT00940000157504.c.a	ENSGT00390000007725.A.b.d	ENSGT00940000160210.d.a #20	ENSGT00940000160210.c #20	ENSGT00940000158688.d #21	ENSGT00940000159534.e #22	ENSGT00940000155662.f
Channel catfish	MODERN SPECIES	6	FAM110C (ENSIPUG00000012094)	fbxo25 (ENSIPUG00000012112)	ENSIPUG00000012148	cmtr1 (ENSIPUG00000012160)	CPNE9 (ENSIPUG00000012262)	ANKS1A (ENSIPUG00000013676)	taf11 (ENSIPUG00000013720)	BLTP3A (ENSIPUG00000013761)	ap4b1 (ENSIPUG00000013908)	ENSIPUG00000013930	slc25a55b (ENSIPUG00000013945)	Cd9 (ENSIPUG00000014061)	ngfa (ENSIPUG00000014102)	KCNA3 (ENSIPUG00000014109) #20	kcna2b (ENSIPUG00000014119) #21	KCNA10 (ENSIPUG00000014122) #22	etv7 (ENSIPUG00000014142)	LGR6 (ENSIPUG00000014158)	ENSIPUG00000014200	FRMD4B (ENSIPUG00000014216)	RBM10 (ENSIPUG00000014280)	rhoac (ENSIPUG00000014375)	samhd1 (ENSIPUG00000014401)	ENSIPUG00000014501	irf10 (ENSIPUG00000014604)	ENSIPUG00000014628	ENSIPUG00000014642	ENSIPUG00000014669	ENSIPUG00000014728	ENSIPUG00000014782	ENSIPUG00000014834
Characiphysae_b	ANCESTRAL SPECIES	141	ENSGT00940000163428.a.a.b	ENSGT00940000159065.a	ENSGT00950000183062.a.b.b.a	ENSGT00940000155806.c.a	ENSGT00390000013228	ENSGT00600000084428.a	ENSGT00940000157025	ENSGT00940000167901	ENSGT00940000158152.a.b	ENSGT00940000164224.b	ENSGT00940000157504.c.a	ENSGT00390000007725.A.b.d	ENSGT00940000160210.d.a #20	ENSGT00940000160210.c #20	ENSGT00940000158688.d #21	ENSGT00940000159534.e #22	ENSGT00940000155662.f
Characoidei	ANCESTRAL SPECIES	287					ENSGT00940000155806.c.a	ENSGT00390000013228	ENSGT00600000084428.a	ENSGT00940000157025	ENSGT00940000163962	ENSGT00940000158152.a.b	ENSGT00940000164224.b	ENSGT00940000157504.c.a	ENSGT00390000007725.A.b.d	ENSGT00940000160210.c #20	ENSGT00940000158688.d #21	ENSGT00940000159534.e #22	ENSGT00940000155662.f
Mexicana tetra	MODERN SPECIES	735	ENSAMXG00000034388	ANKS1A (ENSAMXG00000032217)	taf11 (ENSAMXG00000011327)	BLTP3A (ENSAMXG00000011448)	ENSAMXG00000032089	ENSAMXG00000039823	ap4b1 (ENSAMXG00000032182)	zgc:101663 (ENSAMXG00000011657)	ENSAMXG00000043561	slc25a55b (ENSAMXG00000011678)	ENSAMXG00000029200	ngfa (ENSAMXG00000003406)	ENSAMXG00000042384	ENSAMXG00000026286 #20	kcna2b (ENSAMXG00000025393) #21	KCNA10 (ENSAMXG00000042951) #22	ENSAMXG00000031713
Red-bellied piranha	MODERN SPECIES	257													ENSPNAG00000010776	ENSPNAG00000010782 #20	kcna2b (ENSPNAG00000010786) #21	KCNA10 (ENSPNAG00000010799) #22	ENSPNAG00000010835	HDAC7 (ENSPNAG00000010856)	twist3 (ENSPNAG00000010892)	ENSPNAG00000010915	ENSPNAG00000010936	tmem106c (ENSPNAG00000010989)	mitfb (ENSPNAG00000011030)	ENSPNAG00000001505	RBM10 (ENSPNAG00000011074)	rhoac (ENSPNAG00000001518)	samhd1 (ENSPNAG00000001533)	samhd1 (ENSPNAG00000001546)	ENSPNAG00000011205	irf10 (ENSPNAG00000011220)	ENSPNAG00000001615
Electric eel	MODERN SPECIES	596							taf11 (ENSEEEG00000010968)	BLTP3A (ENSEEEG00000010958)	ap4b1 (ENSEEEG00000010957)	zgc:101663 (ENSEEEG00000010956)	slc25a55b (ENSEEEG00000010953)	ENSEEEG00000010951	ngfa (ENSEEEG00000010950)	KCNA3 (ENSEEEG00000010948) #20	kcna2b (ENSEEEG00000010947) #21	KCNA10 (ENSEEEG00000010946) #22
Cyprinoidei	ANCESTRAL SPECIES		ENSGT00980000198821.b	ENSGT00940000163428.a.a.b	ENSGT00940000159065.a	ENSGT00950000183062.a.b.b.a	ENSGT00940000155806.c.a	ENSGT00390000013228	ENSGT00600000084428.a	ENSGT00940000157025	ENSGT00940000167901	ENSGT00940000158152.a.b	ENSGT00940000164224.b	ENSGT00940000157504.c.a	ENSGT00390000007725.A.b.d	ENSGT00940000160210.d.a #20	ENSGT00940000158688.d #21	ENSGT00940000159534.e #22	ENSGT00940000155662.f	ENSGT00940000162211	ENSGT00390000010372	ENSGT00940000157365	ENSGT00940000159939	ENSGT00940000155067.b.b	ENSGT01030000234555.a.a.b.a.b.a.d	ENSGT00940000154709.a.b.a.b	ENSGT00730000112095	ENSGT01030000234588.a.a.a.b	ENSGT00440000039564.a.a	ENSGT00940000156777.d	ENSGT00940000156637.a	ENSGT00940000158040.c	ENSGT00940000165428.c.a
Cyprininae	DUPLICATION
Cyprininae	ANCESTRAL SPECIES	168	ENSGT00730000111641.a	ENSGT00940000161281.j	ENSGT00940000171106.a	ENSGT00980000198821.b	ENSGT00940000163428.a.a.b	ENSGT00940000159065.a.a	ENSGT00950000183062.a.b.b.a.d	ENSGT00390000013228.g	ENSGT00600000084428.a.h	ENSGT00940000167901.a	ENSGT00940000164224.b.a	ENSGT00940000157504.c.a.b	ENSGT00390000007725.A.b.d.b	ENSGT00940000160210.d.a.c #20	ENSGT00940000158688.d.b.b #21	ENSGT00940000159534.e.a #22	ENSGT00940000155662.f.b	ENSGT00940000162211.e	ENSGT00390000010372	ENSGT00940000159939.e	ENSGT00940000155067.b.b.a	ENSGT01030000234555.a.a.b.a.b.a.d	ENSGT00940000158771.h	ENSGT00950000182956.b.b.b.e.a.a.a	ENSGT00390000009166.a.b	ENSGT00940000156735.d.a	ENSGT00940000154709.a.b.a.b.a
Cyprininae_a	ANCESTRAL SPECIES	79	ENSGT01020000230354.A.a.b.a	ENSGT00940000156326.a.a.c	ENSGT00940000161281.j	ENSGT00940000171106.a	ENSGT00980000198821.b.a.a	ENSGT00940000159065.a.a	ENSGT00950000183062.a.b.b.a.d	ENSGT00940000155806.c.a.e	ENSGT00390000013228.g	ENSGT00600000084428.a.h	ENSGT00940000164224.b.a	ENSGT00940000157504.c.a.b	ENSGT00390000007725.A.b.d.b	ENSGT00940000160210.d.a.c #20	ENSGT00940000158688.d.b.b #21	ENSGT00940000159534.e.a #22	ENSGT00940000155662.f.b	ENSGT00940000162211.e	ENSGT00390000010372	ENSGT00940000159939.e	ENSGT00940000155067.b.b.a	ENSGT01030000234555.a.a.b.a.b.a.d	ENSGT00940000158771.h.a	ENSGT00950000182956.b.b.b.e.a.a.a.a	ENSGT00390000009166.a.a	ENSGT00940000156735.d.b	ENSGT00940000154709.a.b.a.b.b	ENSGT00730000112095	ENSGT01030000234588.a.a.a.b.a	ENSGT00940000156777.d.a	ENSGT00940000156637.a.a
Common carp reference	MODERN SPECIES	49	ENSCCRG00000051593	ENSCCRG00000080654	twist3 (ENSCCRG00000076902)	ENSCCRG00000025153	ENSCCRG00000038509	ENSCCRG00000066204	ANKS1A (ENSCCRG00000070308)	taf11 (ENSCCRG00000016117)	BLTP3A (ENSCCRG00000046782)	ap4b1 (ENSCCRG00000005638)	ENSCCRG00000012328	ENSCCRG00000070731	ENSCCRG00000030071	KCNA3 (ENSCCRG00000054021) #20	ENSCCRG00000056428 #21	KCNA10 (ENSCCRG00000060935) #22	ENSCCRG00000010656	etv7 (ENSCCRG00000010653)	zgc:194242 (ENSCCRG00000019284)	ENSCCRG00000082709	ENSCCRG00000015722	ENSCCRG00000015724	ENSCCRG00000005678	ENSCCRG00000005670	smpd2a (ENSCCRG00000005650)	ENSCCRG00000012316	tnnt2a (ENSCCRG00000016222)	lad1 (ENSCCRG00000070756)	ENSCCRG00000055856	phlda3 (ENSCCRG00000069865)	csrp1a (ENSCCRG00000016243)
Golden-line barbel	MODERN SPECIES	674																KCNA10 (ENSSGRG00000003672) #22	ENSSGRG00000003675	etv7 (ENSSGRG00000003678)	zgc:194242 (ENSSGRG00000003680)	ENSSGRG00000003682	LGR6 (ENSSGRG00000003685)	ENSSGRG00000003689	ADORA3 (ENSSGRG00000003692)	ENSSGRG00000003696	TEAD3 (ENSSGRG00000003702)	smpd2a (ENSSGRG00000003716)	PKP1 (ENSSGRG00000003776)	tnnt2a (ENSSGRG00000003788)	ENSSGRG00000003797	phlda3 (ENSSGRG00000003798)	csrp1a (ENSSGRG00000003810)
Goldfish	MODERN SPECIES	15	L3MBTL1 (ENSCARG00000014527)	ENSCARG00000014659	ENSCARG00000014668	WNT7A (ENSCARG00000014675)	ENSCARG00000014683	taf11 (ENSCARG00000014689)	BLTP3A (ENSCARG00000014728)	ap4b1 (ENSCARG00000014960)	zgc:101663 (ENSCARG00000014983)	slc25a55b (ENSCARG00000014994)	ENSCARG00000015054	ngfa (ENSCARG00000015079)	KCNA3 (ENSCARG00000015082) #20	ENSCARG00000015093	kcna2b (ENSCARG00000015104) #21	KCNA10 (ENSCARG00000015119) #22	ENSCARG00000015130	etv7 (ENSCARG00000015136)	zgc:194242 (ENSCARG00000015163)	ube2t (ENSCARG00000015185)	LGR6 (ENSCARG00000015202)	ENSCARG00000015219	ENSCARG00000015226	ENSCARG00000015239	TEAD3 (ENSCARG00000015267)	smpd2a (ENSCARG00000015656)	PKP1 (ENSCARG00000015689)	tnnt2a (ENSCARG00000015698)	ENSCARG00000015709	phlda3 (ENSCARG00000015745)	csrp1a (ENSCARG00000015751)
Cyprininae	ANCESTRAL SPECIES	495	ENSGT00940000160369.j	ENSGT01020000230354.A.a.b.b	ENSGT00940000156326.a.a.d	ENSGT00940000159065.a.b	ENSGT00950000183062.a.b.b.a.c	ENSGT00940000155806.c.a	ENSGT00390000013228.h	ENSGT00600000084428.a.g	ENSGT00940000157025	ENSGT00940000167901.b	ENSGT00940000158152.a.b	ENSGT00940000164224.b.b	ENSGT00940000157504.c.a.a	ENSGT00390000007725.A.b.d.a	ENSGT00940000158688.d.a #21	ENSGT00940000159534.e.b #22	ENSGT00940000155662.f.a	ENSGT00940000162211.f	ENSGT00990000210392	ENSGT00940000157365	ENSGT00940000159939.f	ENSGT00940000155067.b.b.b
Goldfish	MODERN SPECIES	1896	ENSCARG00000040305	PDZD4 (ENSCARG00000040312)	ANKS1A (ENSCARG00000040373)	taf11 (ENSCARG00000041459)	BLTP3A (ENSCARG00000041502)	ap4b1 (ENSCARG00000042025)	zgc:101663 (ENSCARG00000042036)	ENSCARG00000042046	TSHB (ENSCARG00000042149)	slc25a55b (ENSCARG00000042257)	ENSCARG00000042304	ngfa (ENSCARG00000042319)	KCNA3 (ENSCARG00000042324) #20	kcna2b (ENSCARG00000042328) #21	kcna2b (ENSCARG00000042337) #21	KCNA10 (ENSCARG00000042352) #22	ENSCARG00000036321	etv7 (ENSCARG00000036348)	ube2t (ENSCARG00000036366)	LGR6 (ENSCARG00000036387)
Cyprininae_a	ANCESTRAL SPECIES	252	ENSGT00940000171106.b	ENSGT00980000198821.b.b	ENSGT00940000163428.a.a.b	ENSGT00940000159065.a.b	ENSGT00950000183062.a.b.b.a.c	ENSGT00940000155806.c.a.f	ENSGT00390000013228.h	ENSGT00600000084428.a.g	ENSGT00940000157025	ENSGT00940000167901.b	ENSGT00940000158152.a.b	ENSGT00940000164224.b.b	ENSGT00940000157504.c.a.a	ENSGT00390000007725.A.b.d.a	ENSGT00940000158688.d.a #21	ENSGT00940000159534.e.b #22	ENSGT00940000155662.f.a	ENSGT00940000162211.f	ENSGT00990000210392	ENSGT00940000157365	ENSGT00940000159939.f	ENSGT00940000155067.b.b.b	ENSGT00940000158771.h.b	ENSGT00950000182956.b.b.b.e.a.a.b	ENSGT00950000182956.b.b.b.e.a.a.a.b	ENSGT00390000009166.a.b	ENSGT00940000156735.d.a	ENSGT00940000154709.a.b.a.b.a	ENSGT01030000234588.a.a.a.b.b	ENSGT00440000039564.a.a	ENSGT00940000156777.d.b
Common carp reference	MODERN SPECIES	11	ENSCCRG00000058581	ENSCCRG00000078651	ENSCCRG00000038515	ANKS1A (ENSCCRG00000038548)	taf11 (ENSCCRG00000024971)	BLTP3A (ENSCCRG00000024993)	ap4b1 (ENSCCRG00000072374)	zgc:101663 (ENSCCRG00000005641)	TSHB (ENSCCRG00000026356)	slc25a55b (ENSCCRG00000026485)	ENSCCRG00000026493	NGF (ENSCCRG00000042681)	ENSCCRG00000060195	KCNA3 (ENSCCRG00000061809) #20	ENSCCRG00000067613 #21	KCNA10 (ENSCCRG00000067494) #22	ENSCCRG00000019309	etv7 (ENSCCRG00000014997)	ube2t (ENSCCRG00000015001)	ENSCCRG00000018728	ENSCCRG00000054877	ENSCCRG00000028001	ENSCCRG00000039281	smpd2a (ENSCCRG00000043661)	PKP1 (ENSCCRG00000055680)	tnnt2a (ENSCCRG00000021079)	ENSCCRG00000073583	phlda3 (ENSCCRG00000065304)	csrp1a (ENSCCRG00000074776)	NAV1 (ENSCCRG00000080293)	ENSCCRG00000045792
Golden-line barbel	MODERN SPECIES	244														KCNA3 (ENSSGRG00000048557) #20	kcna2b (ENSSGRG00000048558) #21	KCNA10 (ENSSGRG00000048559) #22	ENSSGRG00000048560	etv7 (ENSSGRG00000048561)	ENSSGRG00000048563	ube2t (ENSSGRG00000048564)	LGR6 (ENSSGRG00000048565)	ENSSGRG00000048566	ENSSGRG00000048568	TEAD3 (ENSSGRG00000048634)	smpd2a (ENSSGRG00000048870)	ENSSGRG00000048871	tnnt2a (ENSSGRG00000048874)	ENSSGRG00000048901	phlda3 (ENSSGRG00000048902)	csrp1a (ENSSGRG00000048903)	NAV1 (ENSSGRG00000048904)
Euteleosteomorpha	ANCESTRAL SPECIES	146	ENSGT00940000164248.b.b	ENSGT00940000161969	ENSGT00940000159748	ENSGT00940000160369	ENSGT00950000182945.b.a.a.a.b.b.c.a	ENSGT00940000155545.a	ENSGT00940000165571	ENSGT00940000165405	ENSGT00940000165541	ENSGT00940000158152.a.b	ENSGT00940000164224.b	ENSGT00940000157504.c.a	ENSGT00390000007725.A.b.d	ENSGT00940000160210.d.a #20	ENSGT00940000158688.d #21	ENSGT00940000159534.e #22	ENSGT00940000155662.f	ENSGT00940000160210.d.b #20	ENSGT00940000158688.c #21	ENSGT00940000159534.f #22	ENSGT00550000074828.b	ENSGT01030000234555.a.a.b.a.b.b	ENSGT01030000234555.a.a.b.a.b.a.c	ENSGT00940000163467.a.b.b.a.b	ENSGT00940000160828	ENSGT00940000162211	ENSGT00390000010372	ENSGT00940000157365	ENSGT00940000159939	ENSGT00940000155067.b.b	ENSGT01030000234555.a.a.b.a.b.a.d
Acanthomorphata	ANCESTRAL SPECIES	3	ENSGT00940000161969	ENSGT00940000159748	ENSGT00940000160369	ENSGT00950000182945.b.a.a.a.b.b.c.a	ENSGT00940000155545.a	ENSGT00940000165571	ENSGT00940000165405	ENSGT00940000165541	ENSGT00940000176091	ENSGT00940000158152.a.b	ENSGT00940000164224.b	ENSGT00940000157504.c.a	ENSGT00390000007725.A.b.d	ENSGT00940000160210.d.a #20	ENSGT00940000158688.d #21	ENSGT00940000159534.e #22	ENSGT00940000155662.f	ENSGT00940000162211	ENSGT00390000010372	ENSGT00940000157365	ENSGT00940000159939	ENSGT00940000155067.b.b	ENSGT01030000234555.a.a.b.a.b.a.d	ENSGT00950000182956.b.b.b.e.b	ENSGT00940000156735.d	ENSGT00940000154709.a.b.a.b	ENSGT00730000112095	ENSGT01030000234588.a.b	ENSGT00440000039564.a.a	ENSGT00940000156777.d	ENSGT00940000156637.a
Euacanthomorphacea	ANCESTRAL SPECIES	2	ENSGT00940000161969	ENSGT00940000159748	ENSGT00940000160369	ENSGT00950000182945.b.a.a.a.b.b.c.a	ENSGT00940000155545.a	ENSGT00940000165571	ENSGT00940000165405	ENSGT00940000165541	ENSGT00940000176091	ENSGT00940000158152.a.b	ENSGT00940000164224.b	ENSGT00940000157504.c.a	ENSGT00390000007725.A.b.d	ENSGT00940000160210.d.a #20	ENSGT00940000158688.d #21	ENSGT00940000159534.e #22	ENSGT00940000155662.f	ENSGT00940000162211	ENSGT00390000010372	ENSGT00940000157365	ENSGT00940000159939	ENSGT00940000155067.b.b	ENSGT01030000234555.a.a.b.a.b.a.d	ENSGT00950000182956.b.b.b.e.b	ENSGT00940000156735.d	ENSGT00940000154709.a.b.a.b	ENSGT01030000234588.a.b	ENSGT00440000039564.a.a	ENSGT00940000156777.d	ENSGT00940000156637.a	ENSGT00940000158040.c
Pinecone sodierfish	MODERN SPECIES	21	tktb (ENSMMDG00005003257)	lrrc23 (ENSMMDG00005003193)	RBM10 (ENSMMDG00005003185)	ENSMMDG00005003125	ENSMMDG00005003113	arhgef3l (ENSMMDG00005002871)	uba1 (ENSMMDG00005000558)	ENSMMDG00005000355	ENSMMDG00005000348	ENSMMDG00005000332	slc25a55b (ENSMMDG00005000326)	ENSMMDG00005000314	ngfa (ENSMMDG00005000308)	KCNA3 (ENSMMDG00005000303) #20	kcna2b (ENSMMDG00005000262) #21	KCNA10 (ENSMMDG00005000258) #22	ENSMMDG00005000241	ENSMMDG00005000230	etv7 (ENSMMDG00005000220)	zgc:194242 (ENSMMDG00005000209)	ube2t (ENSMMDG00005000190)	LGR6 (ENSMMDG00005000168)	ENSMMDG00005000152	TEAD3 (ENSMMDG00005007365)	PKP1 (ENSMMDG00005007364)	tnnt2a (ENSMMDG00005007275)	ENSMMDG00005007270	phlda3 (ENSMMDG00005007268)	csrp1a (ENSMMDG00005007267)	NAV1 (ENSMMDG00005007086)	mybpha (ENSMMDG00005007074)
Percomorphaceae	ANCESTRAL SPECIES	7	ENSGT00940000161969	ENSGT00940000159748	ENSGT00940000160369	ENSGT00950000182945.b.a.a.a.b.b.c.a	ENSGT00940000155545.a	ENSGT00940000165571	ENSGT00940000165405	ENSGT00940000165541	ENSGT00940000176091	ENSGT00940000158152.a.b	ENSGT00940000164224.b	ENSGT00940000157504.c.a	ENSGT00390000007725.A.b.d	ENSGT00940000160210.d.a #20	ENSGT00940000158688.d #21	ENSGT00940000159534.e #22	ENSGT00940000155662.f	ENSGT00940000162211	ENSGT00390000010372	ENSGT00940000157365	ENSGT00940000159939	ENSGT00940000155067.b.b	ENSGT01030000234555.a.a.b.a.b.a.d	ENSGT00950000182956.b.b.b.e.b	ENSGT00940000156735.d	ENSGT00940000154709.a.b.a.b	ENSGT01030000234588.a.b	ENSGT00440000039564.a.a	ENSGT00940000156777.d	ENSGT00940000156637.a	ENSGT00940000158040.c
Tiger tail seahorse	MODERN SPECIES	404	atp6ap1lb (ENSHCOG00000002103)	B4GALT3 (ENSHCOG00000002120)	bgnb (ENSHCOG00000002140)	tktb (ENSHCOG00000002160)	ENSHCOG00000002211	rhoaa (ENSHCOG00000002225)	ENSHCOG00000002242	arhgef3l (ENSHCOG00000002263)	uba1 (ENSHCOG00000002312)	ENSHCOG00000002346	slc25a55b (ENSHCOG00000002363)	ENSHCOG00000002375	ngfa (ENSHCOG00000002384)	KCNA3 (ENSHCOG00000002388) #20	kcna2b (ENSHCOG00000002400) #21	KCNA10 (ENSHCOG00000000574) #22	ENSHCOG00000002421	ube2t (ENSHCOG00000002427)	LGR6 (ENSHCOG00000002470)	ENSHCOG00000002485	TEAD3 (ENSHCOG00000002497)	PKP1 (ENSHCOG00000002507)	tnnt2a (ENSHCOG00000002529)	ENSHCOG00000002539	phlda3 (ENSHCOG00000002548)	csrp1a (ENSHCOG00000002560)	NAV1 (ENSHCOG00000002589)	mybpha (ENSHCOG00000002677)	ENSHCOG00000002700	apobec2b (ENSHCOG00000002712)	ccdc115 (ENSHCOG00000002719)
Percomorphaceae_B	ANCESTRAL SPECIES	6	ENSGT00940000161969	ENSGT00940000159748	ENSGT00940000160369	ENSGT00950000182945.b.a.a.a.b.b.c.a	ENSGT00940000155545.a	ENSGT00940000165571	ENSGT00940000165405	ENSGT00940000165541	ENSGT00940000176091	ENSGT00940000158152.a.b	ENSGT00940000164224.b	ENSGT00940000157504.c.a	ENSGT00390000007725.A.b.d	ENSGT00940000160210.d.a #20	ENSGT00940000158688.d #21	ENSGT00940000159534.e #22	ENSGT00940000165158.a	ENSGT00940000162211	ENSGT00390000010372	ENSGT00940000157365	ENSGT00940000159939	ENSGT00940000155067.b.b	ENSGT01030000234555.a.a.b.a.b.a.d	ENSGT00950000182956.b.b.b.e.b	ENSGT00940000156735.d	ENSGT00940000154709.a.b.a.b	ENSGT00730000112095	ENSGT01030000234588.a.b	ENSGT00440000039564.a.a	ENSGT00940000156777.d	ENSGT00940000156637.a
Ovalentaria	ANCESTRAL SPECIES	6	ENSGT00940000164248.b.b	ENSGT00940000161969	ENSGT00940000159748	ENSGT00940000160369	ENSGT00950000182945.b.a.a.a.b.b.c.a	ENSGT00940000155545.a	ENSGT00940000165571	ENSGT00940000165405	ENSGT00940000165541	ENSGT00940000158152.a.b	ENSGT00940000164224.b	ENSGT00940000157504.c.a	ENSGT00390000007725.A.b.d	ENSGT00940000160210.d.a #20	ENSGT00940000158688.d #21	ENSGT00940000159534.e #22	ENSGT00940000165158.a	ENSGT00940000162211	ENSGT00390000010372	ENSGT00940000157365	ENSGT00940000159939	ENSGT00940000155067.b.b	ENSGT01030000234555.a.a.b.a.b.a.d	ENSGT00950000182956.b.b.b.e.b	ENSGT00940000156735.d	ENSGT00940000154709.a.b.a.b	ENSGT00730000112095	ENSGT01030000234588.a.b	ENSGT00440000039564.a.a	ENSGT00940000156777.d	ENSGT00940000156637.a
Atherinomorphae	ANCESTRAL SPECIES	3	ENSGT00940000161969	ENSGT00940000159748	ENSGT00940000160369	ENSGT00950000182945.b.a.a.a.b.b.c.a	ENSGT00940000155545.a	ENSGT00940000165571	ENSGT00940000165405	ENSGT00940000165541	ENSGT00940000176091	ENSGT00940000158152.a.b	ENSGT00940000164224.b	ENSGT00940000157504.c.a	ENSGT00390000007725.A.b.d	ENSGT00940000160210.d.a #20	ENSGT00940000158688.d #21	ENSGT00940000159534.e #22	ENSGT00940000165158.a	ENSGT00940000162211	ENSGT00390000010372	ENSGT00940000157365	ENSGT00940000159939	ENSGT00940000155067.b.b	ENSGT01030000234555.a.a.b.a.b.a.d	ENSGT00950000182956.b.b.b.e.b	ENSGT00940000156735.d	ENSGT00940000154709.a.b.a.b	ENSGT00730000112095	ENSGT01030000234588.a.b	ENSGT00440000039564.a.a	ENSGT00940000156777.d	ENSGT00940000156637.a
Cyprinodontiformes	ANCESTRAL SPECIES	4	ENSGT00940000164248.b.b	ENSGT00940000161969	ENSGT00940000159748	ENSGT00940000160369	ENSGT00950000182945.b.a.a.a.b.b.c.a	ENSGT00940000155545.a	ENSGT00940000165571	ENSGT00940000165405	ENSGT00940000165541	ENSGT00940000158152.a.b	ENSGT00940000164224.b	ENSGT00940000157504.c.a	ENSGT00390000007725.A.b.d	ENSGT00940000160210.d.a #20	ENSGT00940000158688.d #21	ENSGT00940000159534.e #22	ENSGT00940000165158.a	ENSGT00940000162211	ENSGT00390000010372	ENSGT00940000157365	ENSGT00940000159939	ENSGT00940000155067.b.b	ENSGT01030000234555.a.a.b.a.b.a.d	ENSGT00950000182956.b.b.b.e.b	ENSGT00940000156735.d	ENSGT00940000154709.a.b.a.b	ENSGT00730000112095	ENSGT01030000234588.a.b	ENSGT00440000039564.a.a	ENSGT00940000156777.d	ENSGT00940000156637.a
Aplocheiloidei	ANCESTRAL SPECIES		ENSGT00940000161969	ENSGT00940000159748	ENSGT00940000160369	ENSGT00950000182945.b.a.a.a.b.b.c.a	ENSGT00940000155545.a	ENSGT00940000165571	ENSGT00940000165405	ENSGT00940000165541	ENSGT00940000176091	ENSGT00940000158152.a.b	ENSGT00940000164224.b	ENSGT00940000157504.c.a	ENSGT00390000007725.A.b.d	ENSGT00940000160210.d.a #20	ENSGT00940000158688.d #21	ENSGT00940000159534.e #22	ENSGT00940000155662.f	ENSGT00940000165158.a	ENSGT00940000162211	ENSGT00390000010372	ENSGT00940000157365	ENSGT00940000159939	ENSGT00940000155067.b.b	ENSGT01030000234555.a.a.b.a.b.a.d	ENSGT00950000182956.b.b.b.e.b	ENSGT00940000156735.d	ENSGT00940000154709.a.b.a.b	ENSGT01030000234588.a.b	ENSGT00440000039564.a.a	ENSGT00940000156777.d	ENSGT00940000156637.a
Mangrove rivulus	MODERN SPECIES	32	bgnb (ENSKMAG00000019837)	tktb (ENSKMAG00000019868)	lrrc23 (ENSKMAG00000019908)	ENSKMAG00000019926	ENSKMAG00000019965	USP21 (ENSKMAG00000019982)	arhgef3l (ENSKMAG00000020005)	uba1 (ENSKMAG00000020037)	ENSKMAG00000020100	TSHB (ENSKMAG00000020124)	slc25a55b (ENSKMAG00000020135)	ENSKMAG00000020161	ngfa (ENSKMAG00000020180)	KCNA3 (ENSKMAG00000020195) #20	kcna2b (ENSKMAG00000020202) #21	KCNA10 (ENSKMAG00000020211) #22	ENSKMAG00000020227	etv7 (ENSKMAG00000020242)	zgc:194242 (ENSKMAG00000020260)	ube2t (ENSKMAG00000020271)	LGR6 (ENSKMAG00000020288)	ENSKMAG00000020307	TEAD3 (ENSKMAG00000020323)	PKP1 (ENSKMAG00000020344)	tnnt2a (ENSKMAG00000020366)	ENSKMAG00000020388	phlda3 (ENSKMAG00000020415)	csrp1a (ENSKMAG00000020434)	NAV1 (ENSKMAG00000020493)	mybpha (ENSKMAG00000020591)	ENSKMAG00000020605
Turquoise killifish	MODERN SPECIES	1624	ENSNFUG00015007358	LRTM1 (ENSNFUG00015007351)	ENSNFUG00015007347	CACNA2D3 (ENSNFUG00015007321)	ENSNFUG00015007289	ARHGEF3L (ENSNFUG00015007276)	uba1 (ENSNFUG00015005859)	ENSNFUG00015005725	CAMKVL (ENSNFUG00015005713)	ENSNFUG00015005701	slc25a55b (ENSNFUG00015005658)	ENSNFUG00015005407	ngfa (ENSNFUG00015005335)	ENSNFUG00015005330	KCNA3 (ENSNFUG00015005325) #20	KCNA10 (ENSNFUG00015005298) #22	ENSNFUG00015005289	ENSNFUG00015005279	etv7 (ENSNFUG00015005258)	OLA.12299 (ENSNFUG00015005250)	ube2t (ENSNFUG00015005236)	LGR6 (ENSNFUG00015005033)	ENSNFUG00015004997	ENSNFUG00015004986	TEAD3 (ENSNFUG00015004924)	PKP1 (ENSNFUG00015004884)	tnnt2a (ENSNFUG00015004855)	ENSNFUG00015004801	phlda3 (ENSNFUG00015004777)	CSRP1A (ENSNFUG00015018271)	ENSNFUG00015018268
Cyprinodontoidei	ANCESTRAL SPECIES	3	ENSGT00940000164248.b.b	ENSGT00940000161969	ENSGT00940000159748	ENSGT00940000160369	ENSGT00950000182945.b.a.a.a.b.b.c.a	ENSGT00940000155545.a	ENSGT00940000165571	ENSGT00940000165405	ENSGT00940000165541	ENSGT00940000158152.a.b	ENSGT00940000164224.b	ENSGT00940000157504.c.a	ENSGT00390000007725.A.b.d	ENSGT00940000160210.d.a #20	ENSGT00940000158688.d #21	ENSGT00940000159534.e #22	ENSGT00940000165158.a	ENSGT00940000162211	ENSGT00390000010372	ENSGT00940000157365	ENSGT00940000159939	ENSGT00940000155067.b.b	ENSGT01030000234555.a.a.b.a.b.a.d	ENSGT00950000182956.b.b.b.e.b	ENSGT00940000156735.d	ENSGT00940000154709.a.b.a.b	ENSGT00730000112095	ENSGT01030000234588.a.b	ENSGT00440000039564.a.a	ENSGT00940000156777.d	ENSGT00940000156637.a
NAME_4	ANCESTRAL SPECIES	4	ENSGT00940000164248.b.b	ENSGT00940000161969	ENSGT00940000159748	ENSGT00940000160369	ENSGT00950000182945.b.a.a.a.b.b.c.a	ENSGT00940000155545.a	ENSGT00940000165571	ENSGT00940000165405	ENSGT00940000165541	ENSGT00940000158152.a.b	ENSGT00940000164224.b	ENSGT00940000157504.c.a	ENSGT00390000007725.A.b.d	ENSGT00940000160210.d.a #20	ENSGT00940000158688.d #21	ENSGT00940000159534.e #22	ENSGT00940000155662.f	ENSGT00940000165158.a	ENSGT00940000162211	ENSGT00390000010372	ENSGT00940000157365	ENSGT00940000159939	ENSGT00940000155067.b.b	ENSGT01030000234555.a.a.b.a.b.a.d	ENSGT00950000182956.b.b.b.e.b	ENSGT00940000156735.d	ENSGT00940000154709.a.b.a.b	ENSGT01030000234588.a.b	ENSGT00440000039564.a.a	ENSGT00940000156777.d	ENSGT00940000156637.a
Mummichog	MODERN SPECIES	252														KCNA3 (ENSFHEG00000006023) #20	kcna2b (ENSFHEG00000006017) #21	KCNA10 (ENSFHEG00000005987) #22	ENSFHEG00000005972	ENSFHEG00000000162	zgc:194242 (ENSFHEG00000005954)	ube2t (ENSFHEG00000005943)	LGR6 (ENSFHEG00000005898)	ENSFHEG00000005878	ENSFHEG00000005872	TEAD3 (ENSFHEG00000005865)	PKP1 (ENSFHEG00000005831)	tnnt2a (ENSFHEG00000005802)	ENSFHEG00000005670	phlda3 (ENSFHEG00000005663)	csrp1a (ENSFHEG00000005645)	NAV1 (ENSFHEG00000005605)	mybpha (ENSFHEG00000005550)
Sheepshead minnow	MODERN SPECIES	283	ENSCVAG00000009733	tktb (ENSCVAG00000009726)	lrrc23 (ENSCVAG00000009657)	RBM10 (ENSCVAG00000009548)	ENSCVAG00000009530	ENSCVAG00000009522	arhgef3l (ENSCVAG00000009492)	uba1 (ENSCVAG00000009480)	ENSCVAG00000009427	TSHB (ENSCVAG00000009412)	slc25a55b (ENSCVAG00000009382)	ENSCVAG00000009342	ngfa (ENSCVAG00000009340)	KCNA3 (ENSCVAG00000009335) #20	kcna2b (ENSCVAG00000009332) #21	KCNA10 (ENSCVAG00000009299) #22	ENSCVAG00000009277	ENSCVAG00000008994	ENSCVAG00000008985	ENSCVAG00000008976	ENSCVAG00000008964	asb7 (ENSCVAG00000008957)	aldh1a3 (ENSCVAG00000008944)	LRRK1 (ENSCVAG00000008882)	chsy1 (ENSCVAG00000008689)	selenos (ENSCVAG00000008679)
Poeciliinae	ANCESTRAL SPECIES	2	ENSGT00940000164248.b.b	ENSGT00940000161969	ENSGT00940000159748	ENSGT00940000160369	ENSGT00950000182945.b.a.a.a.b.b.c.a	ENSGT00940000155545.a	ENSGT00940000165571	ENSGT00940000165405	ENSGT00940000165541	ENSGT00940000176091	ENSGT00940000164224.b	ENSGT00940000157504.c.a	ENSGT00390000007725.A.b.d	ENSGT00940000160210.d.a #20	ENSGT00940000158688.d #21	ENSGT00940000159534.e #22	ENSGT00940000165158.a	ENSGT00940000162211	ENSGT00390000010372	ENSGT00940000157365	ENSGT00940000159939	ENSGT00940000155067.b.b	ENSGT01030000234555.a.a.b.a.b.a.d	ENSGT00950000182956.b.b.b.e.b	ENSGT00940000156735.d	ENSGT00940000154709.a.b.a.b	ENSGT00730000112095	ENSGT01030000234588.a.b	ENSGT00440000039564.a.a	ENSGT00940000156777.d	ENSGT00940000156637.a
Poecilia	ANCESTRAL SPECIES	14	ENSGT00940000164248.b.b	ENSGT00940000161969	ENSGT00940000159748	ENSGT00940000160369	ENSGT00950000182945.b.a.a.a.b.b.c.a	ENSGT00940000155545.a	ENSGT00940000165571	ENSGT00940000165405	ENSGT00940000165541	ENSGT00940000158152.a.b	ENSGT00940000164224.b	ENSGT00940000157504.c.a	ENSGT00390000007725.A.b.d	ENSGT00940000160210.d.a #20	ENSGT00940000158688.d #21	ENSGT00940000159534.e #22	ENSGT00940000165158.a	ENSGT00940000162211	ENSGT00390000010372	ENSGT00940000157365	ENSGT00940000159939	ENSGT00940000155067.b.b	ENSGT01030000234555.a.a.b.a.b.a.d	ENSGT00950000182956.b.b.b.e.b	ENSGT00940000156735.d	ENSGT00940000154709.a.b.a.b	ENSGT00730000112095	ENSGT01030000234588.a.b	ENSGT00440000039564.a.a	ENSGT00940000156777.d	ENSGT00940000156637.a
NAME_6	ANCESTRAL SPECIES	125	ENSGT00940000164248.b.b	ENSGT00940000161969	ENSGT00940000159748	ENSGT00940000160369	ENSGT00950000182945.b.a.a.a.b.b.c.a	ENSGT00940000155545.a	ENSGT00940000165571	ENSGT00940000165405	ENSGT00940000165541	ENSGT00940000158152.a.b	ENSGT00940000164224.b	ENSGT00940000157504.c.a	ENSGT00390000007725.A.b.d	ENSGT00940000160210.d.a #20	ENSGT00940000158688.d #21	ENSGT00940000159534.e #22	ENSGT00940000165158.a	ENSGT00940000162211	ENSGT00390000010372	ENSGT00940000157365	ENSGT00940000159939	ENSGT00940000155067.b.b	ENSGT01030000234555.a.a.b.a.b.a.d	ENSGT00950000182956.b.b.b.e.b	ENSGT00940000156735.d	ENSGT00940000154709.a.b.a.b	ENSGT00730000112095	ENSGT01030000234588.a.b	ENSGT00440000039564.a.a	ENSGT00940000156777.d	ENSGT00940000156637.a
Amazon molly	MODERN SPECIES	482	ENSPFOG00000005959	tktb (ENSPFOG00000005809)	lrrc23 (ENSPFOG00000005731)	RBM10 (ENSPFOG00000005428)	ENSPFOG00000005404	ENSPFOG00000005232	arhgef3l (ENSPFOG00000004985)	uba1 (ENSPFOG00000004588)	ENSPFOG00000004565	TSHB (ENSPFOG00000004545)	slc25a55b (ENSPFOG00000004459)	ENSPFOG00000004384	ngfa (ENSPFOG00000020131)	KCNA3 (ENSPFOG00000020129) #20	kcna2b (ENSPFOG00000020127) #21	KCNA10 (ENSPFOG00000004362) #22	ENSPFOG00000004355	etv7 (ENSPFOG00000004215)	zgc:194242 (ENSPFOG00000004186)	ube2t (ENSPFOG00000004091)	LGR6 (ENSPFOG00000003542)	ENSPFOG00000003488	ADORA3 (ENSPFOG00000003443)	TEAD3 (ENSPFOG00000003170)	PKP1 (ENSPFOG00000003088)	tnnt2a (ENSPFOG00000002884)	lad1 (ENSPFOG00000002836)	ENSPFOG00000002725	phlda3 (ENSPFOG00000020125)	csrp1a (ENSPFOG00000002623)	NAV1 (ENSPFOG00000001749)
Sailfin molly	MODERN SPECIES	199															kcna2b (ENSPLAG00000001777) #21	KCNA10 (ENSPLAG00000001784) #22	ENSPLAG00000001791	ENSPLAG00000001797	zgc:194242 (ENSPLAG00000001800)	ube2t (ENSPLAG00000001813)	LGR6 (ENSPLAG00000001836)	ENSPLAG00000001847	TEAD3 (ENSPLAG00000001870)	ENSPLAG00000001884	tnnt2a (ENSPLAG00000001896)	ENSPLAG00000001914	phlda3 (ENSPLAG00000001921)	csrp1a (ENSPLAG00000001930)	NAV1 (ENSPLAG00000001948)	mybpha (ENSPLAG00000002030)	ENSPLAG00000002061
Guppy	MODERN SPECIES	459	ENSPREG00000019140	LRTM1 (ENSPREG00000019152)	atp6ap1lb (ENSPREG00000019169)	B4GALT3 (ENSPREG00000019210)	bgnb (ENSPREG00000019253)	tktb (ENSPREG00000019270)	RBM10 (ENSPREG00000019319)	ENSPREG00000019407	ENSPREG00000019554	uba1 (ENSPREG00000019606)	ENSPREG00000019628	ENSPREG00000019654	ngfa (ENSPREG00000019684)	KCNA3 (ENSPREG00000019707) #20	kcna2b (ENSPREG00000019713) #21	KCNA10 (ENSPREG00000019718) #22	ENSPREG00000019726	etv7 (ENSPREG00000019735)	zgc:194242 (ENSPREG00000019758)	LGR6 (ENSPREG00000019790)	ENSPREG00000019817	ENSPREG00000019827	ENSPREG00000019834	TEAD3 (ENSPREG00000019842)	PKP1 (ENSPREG00000019858)	tnnt2a (ENSPREG00000019877)	ENSPREG00000019893	phlda3 (ENSPREG00000019915)	csrp1a (ENSPREG00000019919)	NAV1 (ENSPREG00000019950)	mybpha (ENSPREG00000020009)
Platyfish	MODERN SPECIES		B4GALT3 (ENSXMAG00000028248)	bgnb (ENSXMAG00000008350)	tktb (ENSXMAG00000008325)	lrrc23 (ENSXMAG00000024965)	ENSXMAG00000025119	ENSXMAG00000008307	arhgef3l (ENSXMAG00000008297)	uba1 (ENSXMAG00000008274)	ENSXMAG00000008262	ENSXMAG00000008261	slc25a55b (ENSXMAG00000008253)	ENSXMAG00000026349	ngfa (ENSXMAG00000027286)	KCNA3 (ENSXMAG00000019464) #20	kcna2b (ENSXMAG00000019460) #21	KCNA10 (ENSXMAG00000019458) #22	ENSXMAG00000027066	etv7 (ENSXMAG00000008241)	zgc:194242 (ENSXMAG00000008239)	ube2t (ENSXMAG00000008235)	LGR6 (ENSXMAG00000026538)	ENSXMAG00000008205	ADORA3 (ENSXMAG00000022918)	TEAD3 (ENSXMAG00000008189)	PKP1 (ENSXMAG00000008184)	tnnt2a (ENSXMAG00000008178)	ENSXMAG00000008174	phlda3 (ENSXMAG00000019456)	csrp1a (ENSXMAG00000008165)	NAV1 (ENSXMAG00000008152)	mybpha (ENSXMAG00000008144)
Oryzias	ANCESTRAL SPECIES	4	ENSGT00940000164248.b.b	ENSGT00940000161969	ENSGT00940000159748	ENSGT00940000160369	ENSGT00950000182945.b.a.a.a.b.b.c.a	ENSGT00940000155545.a	ENSGT00940000165571	ENSGT00940000165405	ENSGT00940000165541	ENSGT00940000176091	ENSGT00940000164224.b	ENSGT00940000157504.c.a	ENSGT00390000007725.A.b.d	ENSGT00940000160210.d.a #20	ENSGT00940000158688.d #21	ENSGT00940000159534.e #22	ENSGT00940000165158.a	ENSGT00940000162211	ENSGT00390000010372	ENSGT00940000157365	ENSGT00940000159939	ENSGT00940000155067.b.b	ENSGT00950000182956.b.b.b.e.b	ENSGT00940000156735.d	ENSGT00940000154709.a.b.a.b	ENSGT01030000234588.a.b	ENSGT00440000039564.a.a	ENSGT00940000156777.d	ENSGT00940000156637.a	ENSGT00940000158040.c	ENSGT00940000165428.c.a
Oryzias_b	ANCESTRAL SPECIES	2	ENSGT00940000164248.b.b	ENSGT00940000161969	ENSGT00940000159748	ENSGT00940000160369	ENSGT00950000182945.b.a.a.a.b.b.c.a	ENSGT00940000155545.a	ENSGT00940000165571	ENSGT00940000165405	ENSGT00940000165541	ENSGT00940000158152.a.b	ENSGT00940000164224.b	ENSGT00940000157504.c.a	ENSGT00390000007725.A.b.d	ENSGT00940000160210.d.a #20	ENSGT00940000158688.d #21	ENSGT00940000159534.e #22	ENSGT00940000165158.a	ENSGT00940000162211	ENSGT00390000010372	ENSGT00940000157365	ENSGT00940000159939	ENSGT00940000155067.b.b	ENSGT00950000182956.b.b.b.e.b	ENSGT00940000156735.d	ENSGT00940000154709.a.b.a.b	ENSGT01030000234588.a.b	ENSGT00440000039564.a.a	ENSGT00940000156777.d	ENSGT00940000156637.a	ENSGT00940000158040.c	ENSGT00940000165428.c.a
Indian medaka	MODERN SPECIES	23	bgnb (ENSOMEG00000014178)	ENSOMEG00000014195	tktb (ENSOMEG00000014247)	lrrc23 (ENSOMEG00000014267)	ENSOMEG00000014309	rhoaa (ENSOMEG00000000358)	ENSOMEG00000014351	arhgef3l (ENSOMEG00000014372)	uba1 (ENSOMEG00000014443)	ENSOMEG00000014473	TSHB (ENSOMEG00000014509)	slc25a55b (ENSOMEG00000014553)	ENSOMEG00000014570	ngfa (ENSOMEG00000014591)	KCNA3 (ENSOMEG00000014600) #20	KCNA10 (ENSOMEG00000014613) #22	ENSOMEG00000014633	etv7 (ENSOMEG00000014660)	zgc:194242 (ENSOMEG00000014673)	ube2t (ENSOMEG00000014691)	LGR6 (ENSOMEG00000014783)	ENSOMEG00000014822	TEAD3 (ENSOMEG00000014856)	PKP1 (ENSOMEG00000014881)	tnnt2a (ENSOMEG00000014969)	ENSOMEG00000015033	phlda3 (ENSOMEG00000015044)	csrp1a (ENSOMEG00000015070)	NAV1 (ENSOMEG00000015259)	mybpha (ENSOMEG00000015334)	ENSOMEG00000015404
Javanese ricefish	MODERN SPECIES	21	bgnb (ENSOJAG00000000326)	tktb (ENSOJAG00000000242)	lrrc23 (ENSOJAG00000021172)	RBM10 (ENSOJAG00000021140)	ENSOJAG00000021127	USP21 (ENSOJAG00000021058)	arhgef3l (ENSOJAG00000020990)	uba1 (ENSOJAG00000020284)	ENSOJAG00000020214	ENSOJAG00000020043	slc25a55b (ENSOJAG00000019994)	ENSOJAG00000019982	ngfa (ENSOJAG00000019979)	KCNA3 (ENSOJAG00000019965) #20	kcna2b (ENSOJAG00000019950) #21	KCNA10 (ENSOJAG00000019947) #22	ENSOJAG00000019909	zgc:194242 (ENSOJAG00000019901)	etv7 (ENSOJAG00000019890)	ube2t (ENSOJAG00000019858)	LGR6 (ENSOJAG00000019715)	ENSOJAG00000019690	TEAD3 (ENSOJAG00000019600)	PKP1 (ENSOJAG00000019589)	tnnt2a (ENSOJAG00000019525)	ENSOJAG00000019449	phlda3 (ENSOJAG00000019415)	csrp1a (ENSOJAG00000019379)	NAV1 (ENSOJAG00000019010)	mybpha (ENSOJAG00000018941)	ENSOJAG00000018929
Oryzias_a	ANCESTRAL SPECIES		ENSGT00940000164248.b.b	ENSGT00940000161969	ENSGT00940000159748	ENSGT00940000160369	ENSGT00950000182945.b.a.a.a.b.b.c.a	ENSGT00940000155545.a	ENSGT00940000165571	ENSGT00940000165405	ENSGT00940000165541	ENSGT00940000176091	ENSGT00940000164224.b	ENSGT00940000157504.c.a	ENSGT00390000007725.A.b.d	ENSGT00940000160210.d.a #20	ENSGT00940000158688.d #21	ENSGT00940000159534.e #22	ENSGT00940000165158.a	ENSGT00940000162211	ENSGT00390000010372	ENSGT00940000157365	ENSGT00940000159939	ENSGT00940000155067.b.b	ENSGT00950000182956.b.b.b.e.b	ENSGT00940000156735.d	ENSGT00940000154709.a.b.a.b	ENSGT01030000234588.a.b	ENSGT00440000039564.a.a	ENSGT00940000156777.d	ENSGT00940000156637.a	ENSGT00940000158040.c	ENSGT00940000165428.c.a
Chinese medaka	MODERN SPECIES	1092		bgnb (ENSOSIG00000023984)	ENSOSIG00000023985	tktb (ENSOSIG00000023986)	RBM10 (ENSOSIG00000000790)	rhoac (ENSOSIG00000000807)	ENSOSIG00000000823	arhgef3l (ENSOSIG00000000862)	uba1 (ENSOSIG00000001029)	ENSOSIG00000008629	ENSOSIG00000008631	slc25a55b (ENSOSIG00000008632)	ENSOSIG00000008638	ngfa (ENSOSIG00000008639)	kcna2b (ENSOSIG00000008641) #21	KCNA10 (ENSOSIG00000008642) #22	ENSOSIG00000008643	etv7 (ENSOSIG00000008644)	zgc:194242 (ENSOSIG00000008645)	ube2t (ENSOSIG00000008646)	LGR6 (ENSOSIG00000008648)	ENSOSIG00000008652	TEAD3 (ENSOSIG00000008655)	PKP1 (ENSOSIG00000008685)	tnnt2a (ENSOSIG00000008689)	phlda3 (ENSOSIG00000008694)	csrp1a (ENSOSIG00000008696)	NAV1 (ENSOSIG00000008702)	ENSOSIG00000009886	apobec2b (ENSOSIG00000009888)	ccdc115 (ENSOSIG00000009892)
Japanese Medaka HdrR	MODERN SPECIES	21	ENSORLG00000008687	tktb (ENSORLG00000008684)	lrrc23 (ENSORLG00000024830)	ENSORLG00000008657	ENSORLG00000027727	ENSORLG00000008638	arhgef3l (ENSORLG00000008610)	uba1 (ENSORLG00000008592)	ENSORLG00000008530	slc25a55b (ENSORLG00000008520)	ENSORLG00000025050	ENSORLG00000029885	ngfa (ENSORLG00000008499)	KCNA3 (ENSORLG00000008487) #20	ENSORLG00000008486 #21	KCNA10 (ENSORLG00000008479) #22	ENSORLG00000008473	etv7 (ENSORLG00000008468)	zgc:194242 (ENSORLG00000008448)	ube2t (ENSORLG00000008444)	lgr6 (ENSORLG00000008434)	ENSORLG00000008369	ENSORLG00000008361	PKP1 (ENSORLG00000008336)	tnnt2a (ENSORLG00000024544)	ENSORLG00000008327	phlda3 (ENSORLG00000026910)	csrp1a (ENSORLG00000022573)	NAV1 (ENSORLG00000008252)	mybpha (ENSORLG00000008186)	ENSORLG00000023824
Ovalentaria_B	ANCESTRAL SPECIES	2	ENSGT00940000161969	ENSGT00940000159748	ENSGT00940000160369	ENSGT00950000182945.b.a.a.a.b.b.c.a	ENSGT00940000155545.a	ENSGT00940000165571	ENSGT00940000165405	ENSGT00940000165541	ENSGT00940000176091	ENSGT00940000158152.a.b	ENSGT00940000164224.b	ENSGT00940000157504.c.a	ENSGT00390000007725.A.b.d	ENSGT00940000160210.d.a #20	ENSGT00940000158688.d #21	ENSGT00940000159534.e #22	ENSGT00940000165158.a	ENSGT00940000162211	ENSGT00390000010372	ENSGT00940000157365	ENSGT00940000159939	ENSGT00940000155067.b.b	ENSGT01030000234555.a.a.b.a.b.a.d	ENSGT00950000182956.b.b.b.e.b	ENSGT00940000156735.d	ENSGT00940000154709.a.b.a.b	ENSGT00730000112095	ENSGT01030000234588.a.b	ENSGT00440000039564.a.a	ENSGT00940000156777.d	ENSGT00940000156637.a
Cichlidae	ANCESTRAL SPECIES		ENSGT00940000164248.b.b	ENSGT00940000161969	ENSGT00940000159748	ENSGT00940000160369	ENSGT00950000182945.b.a.a.a.b.b.c.a	ENSGT00940000155545.a	ENSGT00940000165571	ENSGT00940000165405	ENSGT00940000165541	ENSGT00940000158152.a.b	ENSGT00940000164224.b	ENSGT00940000157504.c.a	ENSGT00390000007725.A.b.d	ENSGT00940000160210.d.a #20	ENSGT00940000158688.d #21	ENSGT00940000159534.e #22	ENSGT00940000165158.a	ENSGT00940000162211	ENSGT00390000010372	ENSGT00940000157365	ENSGT00940000159939	ENSGT00940000155067.b.b	ENSGT01030000234555.a.a.b.a.b.a.d	ENSGT00950000182956.b.b.b.e.b	ENSGT00940000156735.d	ENSGT00940000154709.a.b.a.b	ENSGT00730000112095	ENSGT01030000234588.a.b	ENSGT00440000039564.a.a	ENSGT00940000156777.d	ENSGT00940000156637.a
Pseudocrenilabrinae	ANCESTRAL SPECIES	5	ENSGT00940000164248.b.b	ENSGT00940000161969	ENSGT00940000159748	ENSGT00940000160369	ENSGT00950000182945.b.a.a.a.b.b.c.a	ENSGT00940000155545.a	ENSGT00940000165571	ENSGT00940000165405	ENSGT00940000165541	ENSGT00940000158152.a.b	ENSGT00940000164224.b	ENSGT00940000157504.c.a	ENSGT00390000007725.A.b.d	ENSGT00940000160210.d.a #20	ENSGT00940000158688.d #21	ENSGT00940000159534.e #22	ENSGT00940000165158.a	ENSGT00940000162211	ENSGT00390000010372	ENSGT00940000157365	ENSGT00940000159939	ENSGT00940000155067.b.b	ENSGT01030000234555.a.a.b.a.b.a.d	ENSGT00950000182956.b.b.b.e.b	ENSGT00940000156735.d	ENSGT00940000154709.a.b.a.b	ENSGT00730000112095	ENSGT01030000234588.a.b	ENSGT00440000039564.a.a	ENSGT00940000156777.d	ENSGT00940000156637.a
Nile tilapia	MODERN SPECIES	12	tktb (ENSONIG00000012373)	lrrc23 (ENSONIG00000029714)	RBM10 (ENSONIG00000012370)	ENSONIG00000040478	ENSONIG00000029846	arhgef3l (ENSONIG00000012366)	uba1 (ENSONIG00000012360)	ENSONIG00000027185	ENSONIG00000012359	slc25a55b (ENSONIG00000012357)	ENSONIG00000012355	ngfa (ENSONIG00000020544)	ENSONIG00000041998	KCNA3 (ENSONIG00000020543) #20	kcna2b (ENSONIG00000020542) #21	KCNA10 (ENSONIG00000012354) #22	ENSONIG00000042216	zgc:194242 (ENSONIG00000012343)	ube2t (ENSONIG00000041983)	LGR6 (ENSONIG00000012329)	ENSONIG00000037061	ENSONIG00000012328	TEAD3 (ENSONIG00000012323)	PKP1 (ENSONIG00000012321)	tnnt2a (ENSONIG00000012310)	TNNI1 (ENSONIG00000012306)	phlda3 (ENSONIG00000020541)	csrp1a (ENSONIG00000012304)	NAV1 (ENSONIG00000012297)	mybpha (ENSONIG00000012294)	ENSONIG00000012291
Pseudocrenilabrinae_A	ANCESTRAL SPECIES	17	ENSGT00940000164248.b.b	ENSGT00940000161969	ENSGT00940000159748	ENSGT00940000160369	ENSGT00950000182945.b.a.a.a.b.b.c.a	ENSGT00940000155545.a	ENSGT00940000165571	ENSGT00940000165405	ENSGT00940000165541	ENSGT00940000158152.a.b	ENSGT00940000164224.b	ENSGT00940000157504.c.a	ENSGT00390000007725.A.b.d	ENSGT00940000160210.d.a #20	ENSGT00940000158688.d #21	ENSGT00940000159534.e #22	ENSGT00940000165158.a	ENSGT00940000162211	ENSGT00390000010372	ENSGT00940000157365	ENSGT00940000159939	ENSGT00940000155067.b.b	ENSGT01030000234555.a.a.b.a.b.a.d	ENSGT00950000182956.b.b.b.e.b	ENSGT00940000156735.d	ENSGT00940000154709.a.b.a.b	ENSGT00730000112095	ENSGT01030000234588.a.b	ENSGT00440000039564.a.a	ENSGT00940000156777.d	ENSGT00940000156637.a
Haplochromini	ANCESTRAL SPECIES	18	ENSGT00940000164248.b.b	ENSGT00940000161969	ENSGT00940000159748	ENSGT00940000160369	ENSGT00950000182945.b.a.a.a.b.b.c.a	ENSGT00940000155545.a	ENSGT00940000165571	ENSGT00940000165405	ENSGT00940000165541	ENSGT00940000158152.a.b	ENSGT00940000164224.b	ENSGT00940000157504.c.a	ENSGT00390000007725.A.b.d	ENSGT00940000160210.d.a #20	ENSGT00940000158688.d #21	ENSGT00940000159534.e #22	ENSGT00940000165158.a	ENSGT00940000162211	ENSGT00390000010372	ENSGT00940000157365	ENSGT00940000159939	ENSGT00940000155067.b.b	ENSGT01030000234555.a.a.b.a.b.a.d	ENSGT00950000182956.b.b.b.e.b	ENSGT00940000156735.d	ENSGT00940000154709.a.b.a.b	ENSGT00730000112095	ENSGT01030000234588.a.b	ENSGT00440000039564.a.a	ENSGT00940000156777.d	ENSGT00940000156637.a
Burton s mouthbrooder	MODERN SPECIES	277	bgnb (ENSHBUG00000007324)	ENSHBUG00000007315	tktb (ENSHBUG00000007307)	RBM10 (ENSHBUG00000000175)	ENSHBUG00000007206	USP21 (ENSHBUG00000006908)	arhgef3l (ENSHBUG00000006877)	uba1 (ENSHBUG00000000860)	ENSHBUG00000006769	TSHB (ENSHBUG00000006734)	slc25a55b (ENSHBUG00000006715)	ENSHBUG00000006663	ngfa (ENSHBUG00000006657)	KCNA3 (ENSHBUG00000006651) #20	kcna2b (ENSHBUG00000006642) #21	KCNA10 (ENSHBUG00000006638) #22	ENSHBUG00000006633	etv7 (ENSHBUG00000006623)	zgc:194242 (ENSHBUG00000006618)	ube2t (ENSHBUG00000006606)	LGR6 (ENSHBUG00000006576)	ENSHBUG00000006548	ENSHBUG00000006534	TEAD3 (ENSHBUG00000006501)	PKP1 (ENSHBUG00000006214)	tnnt2a (ENSHBUG00000006203)	ENSHBUG00000000151	phlda3 (ENSHBUG00000006149)	csrp1a (ENSHBUG00000006143)	NAV1 (ENSHBUG00000006096)	mybpha (ENSHBUG00000006003)
Haplochromini_A	ANCESTRAL SPECIES	22	ENSGT00940000164248.b.b	ENSGT00940000161969	ENSGT00940000159748	ENSGT00940000160369	ENSGT00950000182945.b.a.a.a.b.b.c.a	ENSGT00940000155545.a	ENSGT00940000165571	ENSGT00940000165405	ENSGT00940000165541	ENSGT00940000158152.a.b	ENSGT00940000164224.b	ENSGT00940000157504.c.a	ENSGT00390000007725.A.b.d	ENSGT00940000160210.d.a #20	ENSGT00940000158688.d #21	ENSGT00940000159534.e #22	ENSGT00940000165158.a	ENSGT00940000162211	ENSGT00390000010372	ENSGT00940000157365	ENSGT00940000159939	ENSGT00940000155067.b.b	ENSGT01030000234555.a.a.b.a.b.a.d	ENSGT00950000182956.b.b.b.e.b	ENSGT00940000156735.d	ENSGT00940000154709.a.b.a.b	ENSGT00730000112095	ENSGT01030000234588.a.b	ENSGT00440000039564.a.a	ENSGT00940000156777.d	ENSGT00940000156637.a
P. nyererei	MODERN SPECIES	342	bgnb (ENSPNYG00000015093)	tktb (ENSPNYG00000015170)	lrrc23 (ENSPNYG00000015198)	ENSPNYG00000015230	ENSPNYG00000015253	USP21 (ENSPNYG00000015266)	arhgef3l (ENSPNYG00000015297)	uba1 (ENSPNYG00000015323)	ENSPNYG00000015402	ENSPNYG00000015528	slc25a55b (ENSPNYG00000015988)	ENSPNYG00000016016	ngfa (ENSPNYG00000016034)	KCNA3 (ENSPNYG00000016041) #20	kcna2b (ENSPNYG00000016065) #21	KCNA10 (ENSPNYG00000016078) #22	ENSPNYG00000016099	etv7 (ENSPNYG00000016140)	zgc:194242 (ENSPNYG00000016170)	ube2t (ENSPNYG00000016185)	LGR6 (ENSPNYG00000016209)	ENSPNYG00000016259	TEAD3 (ENSPNYG00000016344)	PKP1 (ENSPNYG00000016498)	tnnt2a (ENSPNYG00000016519)	ENSPNYG00000016551	phlda3 (ENSPNYG00000016646)	csrp1a (ENSPNYG00000016657)	NAV1 (ENSPNYG00000016685)	mybpha (ENSPNYG00000016722)	ENSPNYG00000016739
Haplochromini_B	ANCESTRAL SPECIES	19	ENSGT00940000164248.b.b	ENSGT00940000161969	ENSGT00940000159748	ENSGT00940000160369	ENSGT00950000182945.b.a.a.a.b.b.c.a	ENSGT00940000155545.a	ENSGT00940000165571	ENSGT00940000165405	ENSGT00940000165541	ENSGT00940000158152.a.b	ENSGT00940000164224.b	ENSGT00940000157504.c.a	ENSGT00390000007725.A.b.d	ENSGT00940000160210.d.a #20	ENSGT00940000158688.d #21	ENSGT00940000159534.e #22	ENSGT00940000165158.a	ENSGT00940000162211	ENSGT00390000010372	ENSGT00940000157365	ENSGT00940000159939	ENSGT00940000155067.b.b	ENSGT01030000234555.a.a.b.a.b.a.d	ENSGT00950000182956.b.b.b.e.b	ENSGT00940000156735.d	ENSGT00940000154709.a.b.a.b	ENSGT00730000112095	ENSGT01030000234588.a.b	ENSGT00440000039564.a.a	ENSGT00940000156777.d	ENSGT00940000156637.a
Zebra mbuna	MODERN SPECIES	1103	tktb (ENSMZEG00005027115)	lrrc23 (ENSMZEG00005027118)	RBM10 (ENSMZEG00005027122)	ENSMZEG00005027126	USP21 (ENSMZEG00005027127)	arhgef3l (ENSMZEG00005027128)	uba1 (ENSMZEG00005027129)	ENSMZEG00005027131	TSHB (ENSMZEG00005027133)	slc25a55b (ENSMZEG00005027134)	ENSMZEG00005027135	ngfa (ENSMZEG00005027136)	ENSMZEG00005027137	KCNA3 (ENSMZEG00005027138) #20	kcna2b (ENSMZEG00005027139) #21	KCNA10 (ENSMZEG00005027140) #22	ENSMZEG00005027141	etv7 (ENSMZEG00005027142)	zgc:194242 (ENSMZEG00005027143)	ube2t (ENSMZEG00005027144)	LGR6 (ENSMZEG00005027145)	ENSMZEG00005027146	ENSMZEG00005027147	TEAD3 (ENSMZEG00005027150)	PKP1 (ENSMZEG00005027151)	tnnt2a (ENSMZEG00005027152)	ENSMZEG00005027153	phlda3 (ENSMZEG00005027154)	csrp1a (ENSMZEG00005027155)	NAV1 (ENSMZEG00005027156)	mybpha (ENSMZEG00005027157)
Eastern happy	MODERN SPECIES	12	ENSACLG00000008877	tktb (ENSACLG00000008826)	RBM10 (ENSACLG00000008773)	ENSACLG00000008766	USP21 (ENSACLG00000008757)	arhgef3l (ENSACLG00000008705)	uba1 (ENSACLG00000008672)	ENSACLG00000008655	ENSACLG00000008650	TSHB (ENSACLG00000008633)	slc25a55b (ENSACLG00000008604)	ENSACLG00000008589	ngfa (ENSACLG00000008570)	KCNA3 (ENSACLG00000008318) #20	kcna2b (ENSACLG00000008315) #21	KCNA10 (ENSACLG00000008313) #22	ENSACLG00000008309	etv7 (ENSACLG00000008304)	zgc:194242 (ENSACLG00000008295)	ube2t (ENSACLG00000008284)	LGR6 (ENSACLG00000008273)	ENSACLG00000008262	ENSACLG00000008241	TEAD3 (ENSACLG00000008230)	PKP1 (ENSACLG00000008220)	tnnt2a (ENSACLG00000008198)	lad1 (ENSACLG00000008186)	ENSACLG00000008177	phlda3 (ENSACLG00000008171)	csrp1a (ENSACLG00000008160)	NAV1 (ENSACLG00000007688)
Lyretail cichlid	MODERN SPECIES	298	CACNA2D3 (ENSNBRG00000019856)	atp6ap1lb (ENSNBRG00000019829)	B4GALT3 (ENSNBRG00000019808)	bgnb (ENSNBRG00000019793)	ENSNBRG00000019782	ENSNBRG00000019773	ENSNBRG00000019743	ENSNBRG00000019725	ENSNBRG00000019696	ENSNBRG00000019667	ENSNBRG00000019545	slc25a55b (ENSNBRG00000019504)	ENSNBRG00000019488	KCNA3 (ENSNBRG00000019456) #20	kcna2b (ENSNBRG00000019440) #21	KCNA10 (ENSNBRG00000019427) #22	ENSNBRG00000019409	ENSNBRG00000019391	zgc:194242 (ENSNBRG00000019381)	ube2t (ENSNBRG00000019354)	LGR6 (ENSNBRG00000019313)	ENSNBRG00000019294	ENSNBRG00000019282	TEAD3 (ENSNBRG00000019170)	tnnt2a (ENSNBRG00000019113)	ENSNBRG00000019006	phlda3 (ENSNBRG00000018971)	csrp1a (ENSNBRG00000018955)	ENSNBRG00000018924	mybpha (ENSNBRG00000018859)	ENSNBRG00000018827
Midas cichlid	MODERN SPECIES	145	tktb (ENSACIG00000013792)	lrrc23 (ENSACIG00000013822)	RBM10 (ENSACIG00000013859)	ENSACIG00000013952	ENSACIG00000014221	arhgef3l (ENSACIG00000014248)	uba1 (ENSACIG00000014270)	ENSACIG00000014329	TSHB (ENSACIG00000014353)	slc25a55b (ENSACIG00000014375)	ENSACIG00000014395	ngfa (ENSACIG00000014418)	ENSACIG00000014423	KCNA3 (ENSACIG00000014441) #20	kcna2b (ENSACIG00000014469) #21	KCNA10 (ENSACIG00000014493) #22	ENSACIG00000014504	etv7 (ENSACIG00000014537)	zgc:194242 (ENSACIG00000014556)	ube2t (ENSACIG00000014570)	LGR6 (ENSACIG00000014597)	ENSACIG00000014678	ENSACIG00000014710	TEAD3 (ENSACIG00000014741)	PKP1 (ENSACIG00000014836)	ENSACIG00000014856	tnnt2a (ENSACIG00000014877)	lad1 (ENSACIG00000015023)	ENSACIG00000015061	phlda3 (ENSACIG00000015163)	csrp1a (ENSACIG00000015172)
Pomacentridae	ANCESTRAL SPECIES	2	ENSGT00940000164248.b.b	ENSGT00940000161969	ENSGT00940000159748	ENSGT00940000160369	ENSGT00950000182945.b.a.a.a.b.b.c.a	ENSGT00940000155545.a	ENSGT00940000165571	ENSGT00940000165405.h	ENSGT00940000165541	ENSGT00940000176091	ENSGT00940000164224.b	ENSGT00940000157504.c.a	ENSGT00390000007725.A.b.d	ENSGT00940000160210.d.a #20	ENSGT00940000158688.d #21	ENSGT00940000159534.e #22	ENSGT00940000165158.a	ENSGT00940000162211	ENSGT00390000010372	ENSGT00940000157365	ENSGT00940000159939	ENSGT00940000155067.b.b	ENSGT01030000234555.a.a.b.a.b.a.d	ENSGT00950000182956.b.b.b.e.b	ENSGT00940000156735.d	ENSGT00940000154709.a.b.a.b	ENSGT00730000112095	ENSGT01030000234588.a.b	ENSGT00440000039564.a.a	ENSGT00940000156777.d	ENSGT00940000156637.a
Pomacentridae_A	ANCESTRAL SPECIES	12	ENSGT00940000155311.C.c	ENSGT00940000161969	ENSGT00940000159748	ENSGT00940000160369	ENSGT00950000182945.b.a.a.a.b.b.c.a	ENSGT00940000155545.a	ENSGT00940000165571	ENSGT00940000165405.h	ENSGT00940000165541	ENSGT00940000176091	ENSGT00940000164224.b	ENSGT00940000157504.c.a	ENSGT00390000007725.A.b.d	ENSGT00940000160210.d.a #20	ENSGT00940000158688.d #21	ENSGT00940000159534.e #22	ENSGT00940000165158.a	ENSGT00940000162211	ENSGT00390000010372	ENSGT00940000157365	ENSGT00940000159939	ENSGT00940000155067.b.b	ENSGT01030000234555.a.a.b.a.b.a.d	ENSGT00950000182956.b.b.b.e.b	ENSGT00940000156735.d	ENSGT00940000154709.a.b.a.b	ENSGT00730000112095	ENSGT01030000234588.a.b	ENSGT00440000039564.a.a	ENSGT00940000156777.d	ENSGT00940000156637.a
Amphiprion	ANCESTRAL SPECIES	22	ENSGT00940000155311.C.c	ENSGT00940000161969	ENSGT00940000159748	ENSGT00940000160369	ENSGT00950000182945.b.a.a.a.b.b.c.a	ENSGT00940000155545.a	ENSGT00940000165571	ENSGT00940000165405.h	ENSGT00940000165541	ENSGT00940000176091	ENSGT00940000164224.b	ENSGT00940000157504.c.a	ENSGT00390000007725.A.b.d	ENSGT00940000160210.d.a #20	ENSGT00940000158688.d #21	ENSGT00940000159534.e #22	ENSGT00940000165158.a	ENSGT00940000162211	ENSGT00390000010372	ENSGT00940000157365	ENSGT00940000159939	ENSGT00940000155067.b.b	ENSGT01030000234555.a.a.b.a.b.a.d	ENSGT00950000182956.b.b.b.e.b	ENSGT00940000156735.d	ENSGT00940000154709.a.b.a.b	ENSGT00730000112095	ENSGT01030000234588.a.b	ENSGT00440000039564.a.a	ENSGT00940000156777.d	ENSGT00940000156637.a
Clown anemonefish	MODERN SPECIES	1382	bgnb (ENSAOCG00000022634)	tktb (ENSAOCG00000022659)	lrrc23 (ENSAOCG00000022671)	ENSAOCG00000022677	ENSAOCG00000022687	ENSAOCG00000022701	arhgef3l (ENSAOCG00000022710)	uba1 (ENSAOCG00000022812)	ENSAOCG00000022846	ENSAOCG00000022901	slc25a55b (ENSAOCG00000022937)	ENSAOCG00000022953	ngfa (ENSAOCG00000022967)	KCNA3 (ENSAOCG00000022970) #20	kcna2b (ENSAOCG00000002739) #21	KCNA10 (ENSAOCG00000022984) #22	ENSAOCG00000022994	etv7 (ENSAOCG00000023013)	zgc:194242 (ENSAOCG00000023023)	ube2t (ENSAOCG00000023041)	LGR6 (ENSAOCG00000023083)	ENSAOCG00000023099	ENSAOCG00000023107	TEAD3 (ENSAOCG00000023137)	ENSAOCG00000023159	tnnt2a (ENSAOCG00000002251)	lad1 (ENSAOCG00000023203)	ENSAOCG00000023215	ENSAOCG00000023226	phlda3 (ENSAOCG00000023231)	csrp1a (ENSAOCG00000023245)
Orange clownfish	MODERN SPECIES	22	atp6ap1lb (ENSAPEG00000005903)	B4GALT3 (ENSAPEG00000005871)	bgnb (ENSAPEG00000005832)	tktb (ENSAPEG00000005800)	lrrc23 (ENSAPEG00000005708)	ENSAPEG00000005675	ENSAPEG00000005584	ENSAPEG00000005546	arhgef3l (ENSAPEG00000005504)	uba1 (ENSAPEG00000005484)	ENSAPEG00000005469	ENSAPEG00000005426	slc25a55b (ENSAPEG00000005380)	ENSAPEG00000005356	ngfa (ENSAPEG00000005319)	KCNA10 (ENSAPEG00000005301) #22	KCNA3 (ENSAPEG00000005277) #20	ENSAPEG00000005256	etv7 (ENSAPEG00000005230)	zgc:194242 (ENSAPEG00000005200)	ube2t (ENSAPEG00000005182)	LGR6 (ENSAPEG00000005098)	ENSAPEG00000005072	ADORA3 (ENSAPEG00000005052)	TEAD3 (ENSAPEG00000005038)	ENSAPEG00000005020	tnnt2a (ENSAPEG00000004959)	lad1 (ENSAPEG00000004917)	ENSAPEG00000004889	ENSAPEG00000004837	phlda3 (ENSAPEG00000004819)
Spiny chromis	MODERN SPECIES	114	bgnb (ENSAPOG00000018132)	tktb (ENSAPOG00000000497)	lrrc23 (ENSAPOG00000018210)	ENSAPOG00000018220	ENSAPOG00000018238	ENSAPOG00000018308	arhgef3l (ENSAPOG00000018322)	uba1 (ENSAPOG00000018362)	ENSAPOG00000018373	ENSAPOG00000018420	slc25a55b (ENSAPOG00000018471)	ENSAPOG00000018482	ngfa (ENSAPOG00000018491)	KCNA3 (ENSAPOG00000018502) #20	kcna2b (ENSAPOG00000018509) #21	KCNA10 (ENSAPOG00000001016) #22	ENSAPOG00000018568	etv7 (ENSAPOG00000018584)	zgc:194242 (ENSAPOG00000018594)	ube2t (ENSAPOG00000018604)	LGR6 (ENSAPOG00000018672)	ENSAPOG00000018701	TEAD3 (ENSAPOG00000018718)	PKP1 (ENSAPOG00000018730)	tnnt2a (ENSAPOG00000018777)	lad1 (ENSAPOG00000018828)	ENSAPOG00000019024	phlda3 (ENSAPOG00000019035)	csrp1a (ENSAPOG00000019068)	NAV1 (ENSAPOG00000019258)	mybpha (ENSAPOG00000019311)
Bicolor damselfish	MODERN SPECIES	671														KCNA3 (ENSSPAG00000023491) #20	kcna2b (ENSSPAG00000023492) #21	KCNA10 (ENSSPAG00000023493) #22	ENSSPAG00000023495	ENSSPAG00000023497	zgc:194242 (ENSSPAG00000023499)	ube2t (ENSSPAG00000023500)	LGR6 (ENSSPAG00000023502)	ENSSPAG00000023505	ADORA3 (ENSSPAG00000023506)	TEAD3 (ENSSPAG00000023509)	ENSSPAG00000023512	tnnt2a (ENSSPAG00000023513)	ENSSPAG00000023515	ENSSPAG00000023516	phlda3 (ENSSPAG00000023517)	csrp1a (ENSSPAG00000023519)	NAV1 (ENSSPAG00000023521)
Percomorphaceae_C	ANCESTRAL SPECIES	4	ENSGT00940000159748	ENSGT00940000160369	ENSGT00950000182945.b.a.a.a.b.b.c.a	ENSGT00940000155545.a	ENSGT00940000165571	ENSGT00940000165405	ENSGT00940000165541	ENSGT00940000176091	ENSGT00950000185391	ENSGT00940000158152.a.b	ENSGT00940000164224.b	ENSGT00940000157504.c.a	ENSGT00390000007725.A.b.d	ENSGT00940000160210.d.a #20	ENSGT00940000158688.d #21	ENSGT00940000159534.e #22	ENSGT00940000165158.a	ENSGT00940000162211	ENSGT00390000010372	ENSGT00940000157365	ENSGT00940000159939	ENSGT00940000155067.b.b	ENSGT01030000234555.a.a.b.a.b.a.d	ENSGT00950000182956.b.b.b.e.b	ENSGT00940000156735.d	ENSGT00940000154709.a.b.a.b	ENSGT00730000112095	ENSGT01030000234588.a.b	ENSGT00440000039564.a.a	ENSGT00940000156777.d	ENSGT00940000156637.a
Eupercaria	ANCESTRAL SPECIES	4	ENSGT00940000159748	ENSGT00940000160369	ENSGT00950000182945.b.a.a.a.b.b.c.a	ENSGT00940000155545.a	ENSGT00940000165571	ENSGT00940000165405	ENSGT00940000165541	ENSGT00940000176091	ENSGT00950000185391	ENSGT00940000158152.a.b	ENSGT00940000164224.b	ENSGT00940000157504.c.a	ENSGT00390000007725.A.b.d	ENSGT00940000160210.d.a #20	ENSGT00940000158688.d #21	ENSGT00940000159534.e #22	ENSGT00940000165158.a	ENSGT00940000162211	ENSGT00390000010372	ENSGT00940000157365	ENSGT00940000159939	ENSGT00940000155067.b.b	ENSGT01030000234555.a.a.b.a.b.a.d	ENSGT00950000182956.b.b.b.e.b	ENSGT00940000156735.d	ENSGT00940000154709.a.b.a.b	ENSGT00730000112095	ENSGT01030000234588.a.b	ENSGT00440000039564.a.a	ENSGT00940000156777.d	ENSGT00940000156637.a
Tetraodontidae	ANCESTRAL SPECIES	2	ENSGT00940000158549	ENSGT00940000155311.C.c	ENSGT00940000161969	ENSGT00940000159748	ENSGT00940000160369	ENSGT00950000182945.b.a.a.a.b.b.c.a	ENSGT00940000155545.a	ENSGT00940000165571	ENSGT00940000165405	ENSGT00940000165541	ENSGT00940000164224.b	ENSGT00940000157504.c.a	ENSGT00390000007725.A.b.d	ENSGT00940000160210.d.a #20	ENSGT00940000158688.d #21	ENSGT00940000159534.e #22	ENSGT00940000165158.a	ENSGT00940000162211	ENSGT00390000010372	ENSGT00940000157365	ENSGT00940000159939	ENSGT00940000155067.b.b	ENSGT00950000182956.b.b.b.e.b	ENSGT00940000156735.d	ENSGT00940000154709.a.b.a.b	ENSGT00730000112095	ENSGT01030000234588.a.b	ENSGT00440000039564.a.a	ENSGT00940000156637.a	ENSGT00940000158040.c	ENSGT00940000165428.c.a
Fugu	MODERN SPECIES	15	B4GALT3 (ENSTRUG00000022005)	bgnb (ENSTRUG00000009612)	tktb (ENSTRUG00000009835)	lrrc23 (ENSTRUG00000026251)	ENSTRUG00000010215	rhoaa (ENSTRUG00000021194)	USP21 (ENSTRUG00000025602)	arhgef3l (ENSTRUG00000020688)	uba1 (ENSTRUG00000010472)	ENSTRUG00000011045	slc25a55b (ENSTRUG00000002605)	ENSTRUG00000026479	ngfa (ENSTRUG00000011155)	KCNA3 (ENSTRUG00000011200) #20	kcna2b (ENSTRUG00000011204) #21	KCNA10 (ENSTRUG00000011224) #22	ENSTRUG00000021204	etv7 (ENSTRUG00000011237)	ube2t (ENSTRUG00000011353)	LGR6 (ENSTRUG00000011356)	ENSTRUG00000021009	TEAD3 (ENSTRUG00000011546)	PKP1 (ENSTRUG00000022957)	tnnt2a (ENSTRUG00000011858)	ENSTRUG00000012124	phlda3 (ENSTRUG00000012258)	NAV1 (ENSTRUG00000012261)	mybpha (ENSTRUG00000012696)	ENSTRUG00000021854	apobec2b (ENSTRUG00000012839)	ccdc115 (ENSTRUG00000012873)
Tetraodon	MODERN SPECIES	24	LRTM1 (ENSTNIG00000015011)	CACNA2D3 (ENSTNIG00000015012)	atp6ap1lb (ENSTNIG00000015013)	ENSTNIG00000015014	rhoaa (ENSTNIG00000015015)	ENSTNIG00000015016	arhgef3l (ENSTNIG00000015017)	uba1 (ENSTNIG00000015018)	ENSTNIG00000015019	slc25a55b (ENSTNIG00000015020)	ENSTNIG00000015021	ENSTNIG00000000025	ngfa (ENSTNIG00000015022)	KCNA3 (ENSTNIG00000015023) #20	KCNA2 (ENSTNIG00000015024) #21	KCNA10 (ENSTNIG00000015025) #22	ENSTNIG00000015026	etv7 (ENSTNIG00000000806)	zgc:194242 (ENSTNIG00000015027)	ube2t (ENSTNIG00000015028)	LGR6 (ENSTNIG00000015029)	ENSTNIG00000015030	TEAD3 (ENSTNIG00000015031)	PKP1 (ENSTNIG00000015032)	tnnt2a (ENSTNIG00000015033)	lad1 (ENSTNIG00000015034)	ENSTNIG00000015035	NAV1 (ENSTNIG00000015036)	mybpha (ENSTNIG00000015037)	ENSTNIG00000001468	APOBEC2 (ENSTNIG00000015038)
Eupecaria_A	ANCESTRAL SPECIES	4	ENSGT00940000159748	ENSGT00940000160369	ENSGT00950000182945.b.a.a.a.b.b.c.a	ENSGT00940000155545.a	ENSGT00940000165571	ENSGT00940000165405	ENSGT00940000165541	ENSGT00940000176091	ENSGT00950000185391	ENSGT00940000158152.a.b	ENSGT00940000164224.b	ENSGT00940000157504.c.a	ENSGT00390000007725.A.b.d	ENSGT00940000160210.d.a #20	ENSGT00940000158688.d #21	ENSGT00940000159534.e #22	ENSGT00940000165158.a	ENSGT00940000162211	ENSGT00390000010372	ENSGT00940000157365	ENSGT00940000159939	ENSGT00940000155067.b.b	ENSGT01030000234555.a.a.b.a.b.a.d	ENSGT00950000182956.b.b.b.e.b	ENSGT00940000156735.d	ENSGT00940000154709.a.b.a.b	ENSGT01030000234588.a.b	ENSGT00440000039564.a.a	ENSGT00940000156777.d	ENSGT00940000156637.a	ENSGT00940000158040.c
Eupecaria_B	ANCESTRAL SPECIES	5	ENSGT00940000159748	ENSGT00940000160369	ENSGT00950000182945.b.a.a.a.b.b.c.a	ENSGT00940000155545.a	ENSGT00940000165571	ENSGT00940000165405	ENSGT00940000165541	ENSGT00940000176091	ENSGT00950000185391	ENSGT00940000158152.a.b	ENSGT00940000164224.b	ENSGT00940000157504.c.a	ENSGT00390000007725.A.b.d	ENSGT00940000160210.d.a #20	ENSGT00940000158688.d #21	ENSGT00940000159534.e #22	ENSGT00940000165158.a	ENSGT00940000162211	ENSGT00390000010372	ENSGT00940000157365	ENSGT00940000159939	ENSGT00940000155067.b.b	ENSGT01030000234555.a.a.b.a.b.a.d	ENSGT00950000182956.b.b.b.e.b	ENSGT00940000156735.d	ENSGT00940000154709.a.b.a.b	ENSGT01030000234588.a.b	ENSGT00440000039564.a.a	ENSGT00940000156777.d	ENSGT00940000156637.a	ENSGT00940000158040.c
Perciformes	ANCESTRAL SPECIES	4	ENSGT00940000159748	ENSGT00940000160369	ENSGT00950000182945.b.a.a.a.b.b.c.a	ENSGT00940000155545.a	ENSGT00940000165571	ENSGT00940000165405	ENSGT00940000165541	ENSGT00940000176091	ENSGT00950000185391	ENSGT00940000158152.a.b	ENSGT00940000164224.b	ENSGT00940000157504.c.a	ENSGT00390000007725.A.b.d	ENSGT00940000160210.d.a #20	ENSGT00940000158688.d #21	ENSGT00940000159534.e #22	ENSGT00940000165158.a	ENSGT00940000162211	ENSGT00390000010372	ENSGT00940000157365	ENSGT00940000159939	ENSGT00940000155067.b.b	ENSGT01030000234555.a.a.b.a.b.a.d	ENSGT00950000182956.b.b.b.e.b	ENSGT00940000156735.d	ENSGT00940000154709.a.b.a.b	ENSGT01030000234588.a.b	ENSGT00440000039564.a.a	ENSGT00940000156777.d	ENSGT00940000156637.a	ENSGT00940000158040.c
Perciformes_a	ANCESTRAL SPECIES	2	ENSGT00940000159748	ENSGT00940000160369	ENSGT00950000182945.b.a.a.a.b.b.c.a	ENSGT00940000155545.a	ENSGT00940000165571	ENSGT00940000165405	ENSGT00940000165541	ENSGT00940000176091	ENSGT00950000185391	ENSGT00940000158152.a.b	ENSGT00940000164224.b	ENSGT00940000157504.c.a	ENSGT00390000007725.A.b.d	ENSGT00940000160210.d.a #20	ENSGT00940000158688.d #21	ENSGT00940000159534.e #22	ENSGT00940000165158.a	ENSGT00940000162211	ENSGT00390000010372	ENSGT00940000157365	ENSGT00940000159939	ENSGT00940000155067.b.b	ENSGT01030000234555.a.a.b.a.b.a.d	ENSGT00950000182956.b.b.b.e.b	ENSGT00940000156735.d	ENSGT00940000154709.a.b.a.b	ENSGT01030000234588.a.b	ENSGT00440000039564.a.a	ENSGT00940000156777.d	ENSGT00940000156637.a	ENSGT00940000158040.c
Pike perch	MODERN SPECIES	257													ngfa (ENSSLUG00000012017)	KCNA3 (ENSSLUG00000012022) #20	KCNA2 (ENSSLUG00000012028) #21	KCNA10 (ENSSLUG00000012033) #22	ENSSLUG00000012039	etv7 (ENSSLUG00000012042)	zgc:194242 (ENSSLUG00000012046)	ube2t (ENSSLUG00000012047)	LGR6 (ENSSLUG00000012051)	ENSSLUG00000012062	ENSSLUG00000012067	TEAD3 (ENSSLUG00000012074)	PKP1 (ENSSLUG00000012132)	tnnt2a (ENSSLUG00000012147)	ENSSLUG00000012153	phlda3 (ENSSLUG00000012166)	csrp1a (ENSSLUG00000012169)	mybpha (ENSSLUG00000012250)	ENSSLUG00000012277
Channel bull blenny	MODERN SPECIES	21	lrrc23 (ENSCGOG00000005553)	RBM10 (ENSCGOG00000005557)	ENSCGOG00000005579	ENSCGOG00000005640	ENSCGOG00000005641	arhgef3l (ENSCGOG00000005646)	uba1 (ENSCGOG00000005843)	ENSCGOG00000008719	ENSCGOG00000008721	TSHB (ENSCGOG00000008730)	slc25a55b (ENSCGOG00000008738)	ENSCGOG00000008780	ngfa (ENSCGOG00000008788)	ngfa (ENSCGOG00000008792)	KCNA3 (ENSCGOG00000008800) #20	KCNA10 (ENSCGOG00000008816) #22	ENSCGOG00000008836	ENSCGOG00000008850	zgc:194242 (ENSCGOG00000008858)	ube2t (ENSCGOG00000008863)	LGR6 (ENSCGOG00000008871)	ENSCGOG00000008900	ENSCGOG00000008904	TEAD3 (ENSCGOG00000008922)	PKP1 (ENSCGOG00000009065)	tnnt2a (ENSCGOG00000009111)	ENSCGOG00000009593	phlda3 (ENSCGOG00000009599)	csrp1a (ENSCGOG00000009604)	ENSCGOG00000009612	NAV1 (ENSCGOG00000009617)
Cottioidei	ANCESTRAL SPECIES	2	ENSGT00940000164248.b.b	ENSGT00940000161969	ENSGT00940000159748	ENSGT00940000160369	ENSGT00950000182945.b.a.a.a.b.b.c.a	ENSGT00940000155545.a	ENSGT00940000165571	ENSGT00940000165405	ENSGT00940000165541	ENSGT00940000158152.a.b	ENSGT00940000164224.b	ENSGT00940000157504.c.a	ENSGT00390000007725.A.b.d	ENSGT00940000160210.d.a #20	ENSGT00940000158688.d #21	ENSGT00940000159534.e #22	ENSGT00940000165158.a	ENSGT00940000162211	ENSGT00390000010372	ENSGT00940000157365	ENSGT00940000159939	ENSGT00940000155067.b.b	ENSGT00950000182956.b.b.b.e.b	ENSGT00940000156735.d	ENSGT00940000154709.a.b.a.b	ENSGT01030000234588.a.b	ENSGT00440000039564.a.a	ENSGT00940000156777.d	ENSGT00940000156637.a	ENSGT00940000158040.c	ENSGT00940000165428.c.a
Lumpfish	MODERN SPECIES	22	bgnb (ENSCLMG00005007612)	ENSCLMG00005007611	tktb (ENSCLMG00005007398)	lrrc23 (ENSCLMG00005007386)	ENSCLMG00005007383	ENSCLMG00005007382	ENSCLMG00005007380	arhgef3l (ENSCLMG00005007345)	uba1 (ENSCLMG00005003125)	ENSCLMG00005002941	TSHB (ENSCLMG00005002875)	slc25a55b (ENSCLMG00005013844)	ENSCLMG00005013692	ngfa (ENSCLMG00005013687)	KCNA3 (ENSCLMG00005013686) #20	KCNA10 (ENSCLMG00005013684) #22	ENSCLMG00005013683	etv7 (ENSCLMG00005013682)	zgc:194242 (ENSCLMG00005013681)	ube2t (ENSCLMG00005013680)	LGR6 (ENSCLMG00005013679)	ENSCLMG00005013678	TEAD3 (ENSCLMG00005013677)	PKP1 (ENSCLMG00005013675)	tnnt2a (ENSCLMG00005013674)	ENSCLMG00005013671	phlda3 (ENSCLMG00005013669)	csrp1a (ENSCLMG00005013668)	NAV1 (ENSCLMG00005013665)	ENSCLMG00005013621	apobec2b (ENSCLMG00005013620)
Stickleback	MODERN SPECIES	11	bgnb (ENSGACG00000010078)	ENSGACG00000010076	tktb (ENSGACG00000009964)	lrrc23 (ENSGACG00000009961)	ENSGACG00000009953	ENSGACG00000009938	ENSGACG00000009922	arhgef3l (ENSGACG00000009911)	uba1 (ENSGACG00000009903)	ENSGACG00000009900	TSHB (ENSGACG00000009897)	slc25a55b (ENSGACG00000009866)	ENSGACG00000009844	ngfa (ENSGACG00000009843)	kcna2b (ENSGACG00000009837) #21	KCNA10 (ENSGACG00000009836) #22	etv7 (ENSGACG00000009831)	ube2t (ENSGACG00000009813)	LGR6 (ENSGACG00000009806)	ENSGACG00000009805	TEAD3 (ENSGACG00000009758)	PKP1 (ENSGACG00000009752)	tnnt2a (ENSGACG00000009747)	ENSGACG00000009743	ENSGACG00000009740	ENSGACG00000009730	phlda3 (ENSGACG00000009727)	csrp1a (ENSGACG00000009706)	NAV1 (ENSGACG00000009691)	mybpha (ENSGACG00000009683)	ENSGACG00000009673
Eupecaria_C	ANCESTRAL SPECIES	5	ENSGT00940000164248.b.b	ENSGT00940000161969	ENSGT00940000159748	ENSGT00940000160369	ENSGT00950000182945.b.a.a.a.b.b.c.a	ENSGT00940000155545.a	ENSGT00940000165571	ENSGT00940000165405	ENSGT00940000165541	ENSGT00940000158152.a.b	ENSGT00940000164224.b	ENSGT00940000157504.c.a	ENSGT00390000007725.A.b.d	ENSGT00940000160210.d.a #20	ENSGT00940000158688.d #21	ENSGT00940000159534.e #22	ENSGT00940000165158.a	ENSGT00940000162211	ENSGT00390000010372	ENSGT00940000157365	ENSGT00940000159939	ENSGT00940000155067.b.b	ENSGT01030000234555.a.a.b.a.b.a.d	ENSGT00950000182956.b.b.b.e.b	ENSGT00940000156735.d	ENSGT00940000154709.a.b.a.b	ENSGT01030000234588.a.b	ENSGT00440000039564.a.a	ENSGT00940000156777.d	ENSGT00940000156637.a	ENSGT00940000158040.c
Gilthead seabream	MODERN SPECIES	21	ENSSAUG00010007722	tktb (ENSSAUG00010007628)	lrrc23 (ENSSAUG00010007624)	RBM10 (ENSSAUG00010007623)	ENSSAUG00010007621	USP21 (ENSSAUG00010007620)	arhgef3l (ENSSAUG00010007617)	uba1 (ENSSAUG00010004476)	ENSSAUG00010004405	TSHB (ENSSAUG00010004400)	slc25a55b (ENSSAUG00010004368)	ENSSAUG00010004358	ngfa (ENSSAUG00010004356)	KCNA3 (ENSSAUG00010004354) #20	kcna2b (ENSSAUG00010004345) #21	KCNA10 (ENSSAUG00010004341) #22	ENSSAUG00010004333	etv7 (ENSSAUG00010004327)	zgc:194242 (ENSSAUG00010004321)	ube2t (ENSSAUG00010004315)	LGR6 (ENSSAUG00010004126)	ENSSAUG00010024688	TEAD3 (ENSSAUG00010024675)	PKP1 (ENSSAUG00010024669)	tnnt2a (ENSSAUG00010024667)	ENSSAUG00010024661	kctd6b (ENSSAUG00010024658)	abhd6b (ENSSAUG00010024654)	slmapb (ENSSAUG00010024652)	cers5 (ENSSAUG00010024578)	ENSSAUG00010024575
Eupercaria_incertae_sedis	ANCESTRAL SPECIES	15	ENSGT00940000155311.C.c	ENSGT00940000161969	ENSGT00940000159748	ENSGT00940000160369	ENSGT00950000182945.b.a.a.a.b.b.c.a	ENSGT00940000155545.a	ENSGT00940000165571	ENSGT00940000165405	ENSGT00940000165541	ENSGT00940000176091	ENSGT00940000164224.b	ENSGT00940000157504.c.a	ENSGT00390000007725.A.b.d	ENSGT00940000160210.d.a #20	ENSGT00940000158688.d #21	ENSGT00940000159534.e #22	ENSGT00940000165158.a	ENSGT00940000162211	ENSGT00390000010372	ENSGT00940000157365	ENSGT00940000159939	ENSGT00940000155067.b.b	ENSGT01030000234555.a.a.b.a.b.a.d	ENSGT00950000182956.b.b.b.e.b	ENSGT00940000156735.d	ENSGT00940000154709.a.b.a.b	ENSGT01030000234588.a.b	ENSGT00440000039564.a.a	ENSGT00940000156777.d	ENSGT00940000156637.a	ENSGT00940000158040.c
European seabass	MODERN SPECIES	14	CACNA2D3 (ENSDLAG00005016467)	LRTM1 (ENSDLAG00005017035)	ENSDLAG00005027961	ENSDLAG00005017066	ENSDLAG00005017207	tktb (ENSDLAG00005017248)	ENSDLAG00005017732	ENSDLAG00005017885	arhgef3l (ENSDLAG00005029862)	ENSDLAG00005019503	ENSDLAG00005019548	ENSDLAG00005019568	ENSDLAG00005033887	KCNA3 (ENSDLAG00005029576) #20	ENSDLAG00005029620 #21	KCNA10 (ENSDLAG00005032423) #22	ENSDLAG00005019604	etv7 (ENSDLAG00005019610)	zgc:194242 (ENSDLAG00005019617)	ube2t (ENSDLAG00005034496)	ENSDLAG00005019632	ENSDLAG00005031154	ENSDLAG00005030911	ENSDLAG00005019690	ENSDLAG00005019908	ENSDLAG00005019918	ENSDLAG00005019930	NAV1 (ENSDLAG00005019975)	phlda3 (ENSDLAG00005019951)	csrp1a (ENSDLAG00005033635)	mybpha (ENSDLAG00005020002)
Large yellow croaker	MODERN SPECIES	487	B4GALT3 (ENSLCRG00005001603)	bgnb (ENSLCRG00005001617)	tktb (ENSLCRG00005001723)	lrrc23 (ENSLCRG00005003226)	RBM10 (ENSLCRG00005003308)	ENSLCRG00005003379	ENSLCRG00005003383	arhgef3l (ENSLCRG00005003387)	uba1 (ENSLCRG00005003403)	ENSLCRG00005004334	ENSLCRG00005004347	slc25a55b (ENSLCRG00005004351)	ENSLCRG00005004421	ngfa (ENSLCRG00005004423)	KCNA3 (ENSLCRG00005004425) #20	KCNA10 (ENSLCRG00005004428) #22	ENSLCRG00005004431	ENSLCRG00005004435	zgc:194242 (ENSLCRG00005004437)	ube2t (ENSLCRG00005004439)	LGR6 (ENSLCRG00005004444)	ENSLCRG00005004446	ENSLCRG00005004447	TEAD3 (ENSLCRG00005004455)	PKP1 (ENSLCRG00005005166)	tnnt2a (ENSLCRG00005005169)	ENSLCRG00005005170	phlda3 (ENSLCRG00005005171)	csrp1a (ENSLCRG00005005174)	ENSLCRG00005005249	NAV1 (ENSLCRG00005005250)
Ballan wrasse	MODERN SPECIES	75	bgnb (ENSLBEG00000006729)	tktb (ENSLBEG00000006865)	lrrc23 (ENSLBEG00000007490)	ENSLBEG00000007620	ENSLBEG00000007698	ENSLBEG00000007985	arhgef3l (ENSLBEG00000008039)	uba1 (ENSLBEG00000008137)	ENSLBEG00000008359	TSHB (ENSLBEG00000008389)	slc25a55b (ENSLBEG00000008428)	ENSLBEG00000008468	ngfa (ENSLBEG00000008487)	KCNA3 (ENSLBEG00000008500) #20	kcna2b (ENSLBEG00000008514) #21	KCNA10 (ENSLBEG00000008524) #22	ENSLBEG00000008543	etv7 (ENSLBEG00000008581)	zgc:194242 (ENSLBEG00000008626)	ube2t (ENSLBEG00000008650)	LGR6 (ENSLBEG00000008806)	ENSLBEG00000008847	ENSLBEG00000008872	TEAD3 (ENSLBEG00000008926)	ENSLBEG00000009021	tnnt2a (ENSLBEG00000009060)	ENSLBEG00000009090	phlda3 (ENSLBEG00000009127)	csrp1a (ENSLBEG00000009147)	ENSLBEG00000009209	mybpha (ENSLBEG00000009255)
Percomorphaceae_D	ANCESTRAL SPECIES	4	ENSGT00940000159748	ENSGT00940000160369	ENSGT00950000182945.b.a.a.a.b.b.c.a	ENSGT00940000155545.a	ENSGT00940000165571	ENSGT00940000165405	ENSGT00940000165541	ENSGT00940000176091	ENSGT00950000185391	ENSGT00940000158152.a.b	ENSGT00940000164224.b	ENSGT00940000157504.c.a	ENSGT00390000007725.A.b.d	ENSGT00940000160210.d.a #20	ENSGT00940000158688.d #21	ENSGT00940000159534.e #22	ENSGT00940000165158.a	ENSGT00940000162211	ENSGT00390000010372	ENSGT00940000157365	ENSGT00940000159939	ENSGT00940000155067.b.b	ENSGT01030000234555.a.a.b.a.b.a.d	ENSGT00950000182956.b.b.b.e.b	ENSGT00940000156735.d	ENSGT00940000154709.a.b.a.b	ENSGT00730000112095	ENSGT01030000234588.a.b	ENSGT00440000039564.a.a	ENSGT00940000156777.d	ENSGT00940000156637.a
Anabantaria	ANCESTRAL SPECIES	3	ENSGT00940000159748	ENSGT00940000160369	ENSGT00950000182945.b.a.a.a.b.b.c.a	ENSGT00940000155545.a	ENSGT00940000165571	ENSGT00940000165405	ENSGT00940000165541	ENSGT00940000176091	ENSGT00950000185391	ENSGT00940000158152.a.b	ENSGT00940000164224.b	ENSGT00940000157504.c.a	ENSGT00390000007725.A.b.d	ENSGT00940000160210.d.a #20	ENSGT00940000158688.d #21	ENSGT00940000159534.e #22	ENSGT00940000165158.a	ENSGT00940000162211	ENSGT00390000010372	ENSGT00940000157365	ENSGT00940000159939	ENSGT00940000155067.b.b	ENSGT01030000234555.a.a.b.a.b.a.d	ENSGT00950000182956.b.b.b.e.b	ENSGT00940000156735.d	ENSGT00940000154709.a.b.a.b	ENSGT01030000234588.a.b	ENSGT00440000039564.a.a	ENSGT00940000156777.d	ENSGT00940000156637.a	ENSGT00940000158040.c
Zig-zag eel	MODERN SPECIES	21	tktb (ENSMAMG00000009071)	lrrc23 (ENSMAMG00000008925)	ENSMAMG00000024424	ENSMAMG00000008910	ENSMAMG00000008889	arhgef3l (ENSMAMG00000008866)	uba1 (ENSMAMG00000008818)	ENSMAMG00000028180	ENSMAMG00000028638	TSHB (ENSMAMG00000008638)	ENSMAMG00000008609	ENSMAMG00000008595	NGF (ENSMAMG00000027569)	KCNA3 (ENSMAMG00000008569) #20	ENSMAMG00000025139 #21	KCNA10 (ENSMAMG00000008534) #22	ENSMAMG00000008480	etv7 (ENSMAMG00000008460)	zgc:194242 (ENSMAMG00000008456)	zgc:194242 (ENSMAMG00000008445)	ENSMAMG00000008422	ENSMAMG00000008356	ENSMAMG00000008335	ENSMAMG00000026539	ENSMAMG00000008285	PKP1 (ENSMAMG00000008273)	tnnt2a (ENSMAMG00000008247)	ENSMAMG00000008231	phlda3 (ENSMAMG00000008224)	csrp1a (ENSMAMG00000008204)	NAV1 (ENSMAMG00000008140)
Anabantoidei	ANCESTRAL SPECIES	2	ENSGT00940000161969	ENSGT00940000159748	ENSGT00950000182945.b.a.a.a.b.b.c.a	ENSGT00940000155545.a	ENSGT00940000165571	ENSGT00940000165405	ENSGT00940000165541	ENSGT00940000176091	ENSGT00950000185391	ENSGT00940000158152.a.b	ENSGT00940000164224.b	ENSGT00940000157504.c.a	ENSGT00390000007725.A.b.d	ENSGT00940000160210.d.a #20	ENSGT00940000158688.d #21	ENSGT00940000159534.e #22	ENSGT00940000165158.a	ENSGT00940000162211	ENSGT00390000010372	ENSGT00940000157365	ENSGT00940000159939	ENSGT00940000155067.b.b	ENSGT01030000234555.a.a.b.a.b.a.d	ENSGT00950000182956.b.b.b.e.b	ENSGT00940000156735.d	ENSGT00940000154709.a.b.a.b	ENSGT01030000234588.a.b	ENSGT00440000039564.a.a	ENSGT00940000156777.d	ENSGT00940000156637.a	ENSGT00940000158040.c
Siamese fighting fish	MODERN SPECIES	18	B4GALT3 (ENSBSLG00000018115)	bgnb (ENSBSLG00000018123)	tktb (ENSBSLG00000018143)	lrrc23 (ENSBSLG00000019275)	ENSBSLG00000019314	ENSBSLG00000019320	arhgef3l (ENSBSLG00000019344)	uba1 (ENSBSLG00000019395)	ENSBSLG00000020389	ENSBSLG00000020419	slc25a55b (ENSBSLG00000020497)	ENSBSLG00000020501	ngfa (ENSBSLG00000020509)	KCNA3 (ENSBSLG00000020513) #20	KCNA2 (ENSBSLG00000020518) #21	KCNA10 (ENSBSLG00000020521) #22	ENSBSLG00000020522	etv7 (ENSBSLG00000020531)	zgc:194242 (ENSBSLG00000020536)	ube2t (ENSBSLG00000020539)	LGR6 (ENSBSLG00000020541)	ENSBSLG00000020548	ENSBSLG00000008216	TEAD3 (ENSBSLG00000008225)	PKP1 (ENSBSLG00000008376)	tnnt2a (ENSBSLG00000008433)	ENSBSLG00000008494	phlda3 (ENSBSLG00000008525)	csrp1a (ENSBSLG00000008550)	NAV1 (ENSBSLG00000008607)	mybpha (ENSBSLG00000009365)
Climbing perch	MODERN SPECIES	20	bgnb (ENSATEG00000023558)	tktb (ENSATEG00000023536)	lrrc23 (ENSATEG00000023547)	ENSATEG00000025800	ENSATEG00000023511	arhgef3l (ENSATEG00000023509)	uba1 (ENSATEG00000023489)	ENSATEG00000026349	ENSATEG00000025221	TSHB (ENSATEG00000023473)	ENSATEG00000023467	ENSATEG00000030149	NGF (ENSATEG00000023461)	KCNA3 (ENSATEG00000023452) #20	ENSATEG00000023450 #21	KCNA10 (ENSATEG00000023447) #22	ENSATEG00000023440	etv7 (ENSATEG00000023430)	zgc:194242 (ENSATEG00000023424)	ENSATEG00000023416	ENSATEG00000023406	ENSATEG00000023401	ENSATEG00000023330	PKP1 (ENSATEG00000023297)	tnnt2a (ENSATEG00000023286)	ENSATEG00000023274	phlda3 (ENSATEG00000023269)	csrp1a (ENSATEG00000023266)	NAV1 (ENSATEG00000023222)	mybpha (ENSATEG00000023168)	ENSATEG00000029160
Carangaria	ANCESTRAL SPECIES	2	ENSGT00940000164248.b.b	ENSGT00940000161969	ENSGT00940000159748	ENSGT00940000160369	ENSGT00950000182945.b.a.a.a.b.b.c.a	ENSGT00940000155545.a	ENSGT00940000165571	ENSGT00940000165405	ENSGT00940000165541	ENSGT00940000158152.a.b	ENSGT00940000164224.b	ENSGT00940000157504.c.a	ENSGT00390000007725.A.b.d	ENSGT00940000160210.d.a #20	ENSGT00940000158688.d #21	ENSGT00940000159534.e #22	ENSGT00940000165158.a	ENSGT00940000162211	ENSGT00390000010372	ENSGT00940000157365	ENSGT00940000159939	ENSGT00940000155067.b.b	ENSGT01030000234555.a.a.b.a.b.a.d	ENSGT00950000182956.b.b.b.e.b	ENSGT00940000156735.d	ENSGT00940000154709.a.b.a.b	ENSGT00730000112095	ENSGT01030000234588.a.b	ENSGT00440000039564.a.a	ENSGT00940000156777.d	ENSGT00940000156637.a
Pleuronectoidei	ANCESTRAL SPECIES	14	ENSGT00940000155311.C.c	ENSGT00940000161969	ENSGT00940000159748	ENSGT00940000160369	ENSGT00950000182945.b.a.a.a.b.b.c.a	ENSGT00940000155545.a	ENSGT00940000165571	ENSGT00940000165405	ENSGT00940000165541	ENSGT00940000158152.a.b	ENSGT00940000164224.b	ENSGT00940000157504.d	ENSGT00390000007725.A.b.d	ENSGT00940000160210.d.a #20	ENSGT00940000158688.d #21	ENSGT00940000159534.e #22	ENSGT00940000165158.a	ENSGT00940000162211	ENSGT00940000157365	ENSGT00940000159939.h	ENSGT00940000155067.b.b	ENSGT00950000182956.b.b.b.e.b	ENSGT00940000156735.d	ENSGT00940000154709.a.b.a.b	ENSGT01030000234588.a.b	ENSGT00440000039564.a.a	ENSGT00940000156637.a	ENSGT00940000158040.c	ENSGT00940000165428.c.a	ENSGT00940000156616.j	ENSGT00940000158431.a.b
Tongue sole	MODERN SPECIES	1	bhlhe23 (ENSCSEG00000018451)	slc17a9b (ENSCSEG00000018445)	kcna2b (ENSCSEG00000018442) #21	ngfa (ENSCSEG00000018434)	uba1 (ENSCSEG00000018402)	arhgef3l (ENSCSEG00000018397)	tktb (ENSCSEG00000018345)	ENSCSEG00000018334	ENSCSEG00000018305	parapinopsina (ENSCSEG00000018278)	ddx20 (ENSCSEG00000018265)	ENSCSEG00000018263	kcnd3 (ENSCSEG00000018248)	cttnbp2nlb (ENSCSEG00000018240)	capza1b (ENSCSEG00000018213)	KCNA10 (ENSCSEG00000018205) #22	ENSCSEG00000018186	LGR6 (ENSCSEG00000018163)	st14b (ENSCSEG00000018148)	kcnd1 (ENSCSEG00000018138)	gripap1 (ENSCSEG00000018111)	plxna3 (ENSCSEG00000018064)	bcap31 (ENSCSEG00000018042)	ENSCSEG00000017993	slc6a8 (ENSCSEG00000017972)	slc35a2 (ENSCSEG00000017956)	ENSCSEG00000017939	ENSCSEG00000017931	uxt (ENSCSEG00000017921)	cdk20 (ENSCSEG00000017909)	ENSCSEG00000017899
Turbot	MODERN SPECIES	2	bgnb (ENSSMAG00000006777)	tktb (ENSSMAG00000006678)	lrrc23 (ENSSMAG00000028621)	ENSSMAG00000006556	ENSSMAG00000004900	ENSSMAG00000006482	arhgef3l (ENSSMAG00000006455)	uba1 (ENSSMAG00000006302)	ENSSMAG00000006287	TSHB (ENSSMAG00000006247)	ENSSMAG00000006201	ENSSMAG00000006163	ENSSMAG00000006160	KCNA3 (ENSSMAG00000006145) #20	ENSSMAG00000006136 #21	KCNA10 (ENSSMAG00000006119) #22	ENSSMAG00000006064	etv7 (ENSSMAG00000006052)	ube2t (ENSSMAG00000006044)	ENSSMAG00000005874	ENSSMAG00000037231	ENSSMAG00000005763	ENSSMAG00000005449	ENSSMAG00000005381	tnnt2a (ENSSMAG00000005351)	ENSSMAG00000005343	phlda3 (ENSSMAG00000005338)	ENSSMAG00000005320	ENSSMAG00000005154	mybpha (ENSSMAG00000005120)	ENSSMAG00000035937
Carangaria_A	ANCESTRAL SPECIES	1	ENSGT00940000164248.b.b	ENSGT00940000161969	ENSGT00940000159748	ENSGT00940000160369	ENSGT00950000182945.b.a.a.a.b.b.c.a	ENSGT00940000155545.a	ENSGT00940000165571	ENSGT00940000165405	ENSGT00940000165541	ENSGT00940000176091	ENSGT00940000164224.b	ENSGT00940000157504.c.a	ENSGT00390000007725.A.b.d	ENSGT00940000160210.d.a #20	ENSGT00940000158688.d #21	ENSGT00940000159534.e #22	ENSGT00940000165158.a	ENSGT00940000162211	ENSGT00390000010372	ENSGT00940000157365	ENSGT00940000159939	ENSGT00940000155067.b.b	ENSGT01030000234555.a.a.b.a.b.a.d	ENSGT00950000182956.b.b.b.e.b	ENSGT00940000156735.d	ENSGT00940000154709.a.b.a.b	ENSGT00730000112095	ENSGT01030000234588.a.b	ENSGT00440000039564.a.a	ENSGT00940000156777.d	ENSGT00940000156637.a
Seriola	ANCESTRAL SPECIES	8	ENSGT00940000161969	ENSGT00940000159748	ENSGT00940000160369	ENSGT00950000182945.b.a.a.a.b.b.c.a	ENSGT00940000155545.a	ENSGT00940000165571	ENSGT00940000165405	ENSGT00940000165541	ENSGT00940000176091	ENSGT00940000158152.a.b	ENSGT00940000164224.b	ENSGT00940000157504.c.a	ENSGT00390000007725.A.b.d	ENSGT00940000160210.d.a #20	ENSGT00940000158688.d #21	ENSGT00940000159534.e #22	ENSGT00940000165158.a	ENSGT00940000162211	ENSGT00390000010372	ENSGT00940000157365	ENSGT00940000159939	ENSGT00940000155067.b.b	ENSGT01030000234555.a.a.b.a.b.a.d	ENSGT00950000182956.b.b.b.e.b	ENSGT00940000156735.d	ENSGT00940000154709.a.b.a.b	ENSGT00730000112095	ENSGT01030000234588.a.b	ENSGT00440000039564.a.a	ENSGT00940000156777.d	ENSGT00940000156637.a
Yellowtail amberjack	MODERN SPECIES	3093	B4GALT3 (ENSSLDG00000001254)	bgnb (ENSSLDG00000001278)	tktb (ENSSLDG00000001289)	ENSSLDG00000001390	ENSSLDG00000001466	ENSSLDG00000001480	arhgef3l (ENSSLDG00000001543)	uba1 (ENSSLDG00000001602)	ENSSLDG00000001756	ENSSLDG00000001934	slc25a55b (ENSSLDG00000002050)	ENSSLDG00000002090	ngfa (ENSSLDG00000002096)	KCNA3 (ENSSLDG00000002105) #20	kcna2b (ENSSLDG00000002142) #21	KCNA10 (ENSSLDG00000002153) #22	ENSSLDG00000002166	etv7 (ENSSLDG00000002196)	zgc:194242 (ENSSLDG00000002221)	ube2t (ENSSLDG00000002234)	LGR6 (ENSSLDG00000002260)	ENSSLDG00000002336	ADORA3 (ENSSLDG00000002352)	TEAD3 (ENSSLDG00000002454)	PKP1 (ENSSLDG00000002826)	tnnt2a (ENSSLDG00000002845)	lad1 (ENSSLDG00000003041)	ENSSLDG00000003096	phlda3 (ENSSLDG00000003113)	csrp1a (ENSSLDG00000003139)	NAV1 (ENSSLDG00000003183)
Greater amberjack	MODERN SPECIES	23	B4GALT3 (ENSSDUG00000015472)	bgnb (ENSSDUG00000015443)	tktb (ENSSDUG00000015412)	lrrc23 (ENSSDUG00000015349)	ENSSDUG00000015338	USP21 (ENSSDUG00000015307)	arhgef3l (ENSSDUG00000015279)	uba1 (ENSSDUG00000015196)	ENSSDUG00000015098	TSHB (ENSSDUG00000015068)	slc25a55b (ENSSDUG00000015042)	ENSSDUG00000015023	ngfa (ENSSDUG00000015020)	KCNA3 (ENSSDUG00000015008) #20	kcna2b (ENSSDUG00000014997) #21	KCNA10 (ENSSDUG00000014981) #22	ENSSDUG00000014960	etv7 (ENSSDUG00000014938)	zgc:194242 (ENSSDUG00000014923)	ube2t (ENSSDUG00000014902)	LGR6 (ENSSDUG00000014853)	ENSSDUG00000014839	ENSSDUG00000014829	ENSSDUG00000014808	TEAD3 (ENSSDUG00000014772)	PKP1 (ENSSDUG00000014753)	tnnt2a (ENSSDUG00000014693)	lad1 (ENSSDUG00000014670)	ENSSDUG00000014657	phlda3 (ENSSDUG00000014656)	csrp1a (ENSSDUG00000014638)
Barramundi perch	MODERN SPECIES	136	ENSLCAG00010020262	tktb (ENSLCAG00010019673)	lrrc23 (ENSLCAG00010019555)	ENSLCAG00010019540	ENSLCAG00010019520	USP21 (ENSLCAG00010019517)	arhgef3l (ENSLCAG00010019511)	uba1 (ENSLCAG00010018828)	ENSLCAG00010018678	ENSLCAG00010018668	slc25a55b (ENSLCAG00010018660)	ENSLCAG00010018656	ngfa (ENSLCAG00010018647)	KCNA3 (ENSLCAG00010018643) #20	kcna2b (ENSLCAG00010018642) #21	KCNA10 (ENSLCAG00010018640) #22	ENSLCAG00010018635	etv7 (ENSLCAG00010018629)	zgc:194242 (ENSLCAG00010018625)	ube2t (ENSLCAG00010018623)	LGR6 (ENSLCAG00010018603)	ENSLCAG00010018566	TEAD3 (ENSLCAG00010018552)	ENSLCAG00010018547	ENSLCAG00010018541	tnnt2a (ENSLCAG00010018498)	ENSLCAG00010018476	phlda3 (ENSLCAG00010018471)	csrp1a (ENSLCAG00010018463)	NAV1 (ENSLCAG00010018452)	mybpha (ENSLCAG00010018449)
Cod	MODERN SPECIES		bgnb (ENSGMOG00000011133)	ENSGMOG00000011126	tktb (ENSGMOG00000011111)	lrrc23 (ENSGMOG00000011107)	ENSGMOG00000011093	ENSGMOG00000011070	arhgef3l (ENSGMOG00000011058)	uba1 (ENSGMOG00000011035)	ENSGMOG00000011020	ENSGMOG00000035456	ENSGMOG00000011003	ENSGMOG00000010990	ENSGMOG00000028506	KCNA3 (ENSGMOG00000020562) #20	ENSGMOG00000010986 #21	KCNA10 (ENSGMOG00000032500) #22	ENSGMOG00000010927	etv7 (ENSGMOG00000034395)	zgc:194242 (ENSGMOG00000010904)	ube2t (ENSGMOG00000010895)	ENSGMOG00000010870	ENSGMOG00000020561	ENSGMOG00000010743	ENSGMOG00000010731	ENSGMOG00000010719	ENSGMOG00000010706	ENSGMOG00000010682	phlda3 (ENSGMOG00000020342)	ENSGMOG00000018508	ENSGMOG00000003699	tmem269 (ENSGMOG00000011623)
Protacanthopterygii	ANCESTRAL SPECIES	133		ENSGT00940000161969	ENSGT00940000159748	ENSGT00940000160369	ENSGT00950000182945.b.a.a.a.b.b.c.a	ENSGT00940000155545.a	ENSGT00940000165571	ENSGT00940000165405	ENSGT00940000165541.e	ENSGT00940000158152.a.b	ENSGT00940000164224.b	ENSGT00940000157504.c.a	ENSGT00940000160210.d.a #20	ENSGT00940000157504.d	ENSGT00390000007725.A.b.d	ENSGT00940000159534.e #22	ENSGT00940000155662.f	ENSGT00550000074828.b.f	ENSGT00940000162211	ENSGT00940000157365	ENSGT00940000159939	ENSGT00940000155067.b.b	ENSGT00530000063808.a	ENSGT00390000000950.c.a	ENSGT00940000157025	ENSGT00940000163962	ENSGT00390000001092	ENSGT00940000155445	ENSGT00390000003937	ENSGT00940000153588.b.f	ENSGT00390000003897
Salmoninae	DUPLICATION
Salmoninae	ANCESTRAL SPECIES	1316														ENSGT00940000160210.d.a #20	ENSGT00940000158688.c.d.b #21	ENSGT00940000159534.e.c #22
Huchen	MODERN SPECIES	7620																KCNA10 (ENSHHUG00000006703) #22
Salmoninae_a	ANCESTRAL SPECIES	161	ENSGT00940000154709.a.b.a.b	ENSGT00940000166364	ENSGT00390000012929	ENSGT00940000154955.b	ENSGT00530000063168.a.a.b.p	ENSGT00940000164454	ENSGT00940000155170	ENSGT00390000018621.u	ENSGT00940000156650.j.j	ENSGT00950000182846.a.a.a.a.a.b	ENSGT00390000003897.o.b	ENSGT00940000153588.b.f.a	ENSGT00390000003937	ENSGT00940000160210.d.a #20	ENSGT00940000158688.c.d.b #21	ENSGT00940000159534.e.c #22	ENSGT00940000165541.e.a	ENSGT00940000165405.i.b
Salmo	ANCESTRAL SPECIES	154	ENSGT00530000063168.a.a.b.p	ENSGT00940000164454	ENSGT00940000155170	ENSGT00940000156650.j.j	ENSGT00950000182846.a.a.a.a.a.b	ENSGT00390000003897.o.b	ENSGT00940000153588.b.f.a	ENSGT01060000248869	ENSGT00940000165254.d	ENSGT00940000163962	ENSGT00530000063808.a.n	ENSGT00940000157504.c.a.d	ENSGT00390000007725.A.b.d.h	ENSGT00940000160210.d.a.a #20	ENSGT00940000158688.c.d.b #21	ENSGT00940000159534.e.c #22	ENSGT00940000165541.e.a	ENSGT00940000165405.i.b
Atlantic salmon	MODERN SPECIES	4			ENSSSAG00000094049	ENSSSAG00000064068	ENSSSAG00000028837	ENSSSAG00000093666	tkt (ENSSSAG00000043688)	ENSSSAG00000110115	ENSSSAG00000041442	ENSSSAG00000050662	ENSSSAG00000055506	ENSSSAG00000041270	ENSSSAG00000118211	KCNA3 (ENSSSAG00000101969) #20	ENSSSAG00000041646 #21	KCNA10 (ENSSSAG00000101897) #22	ENSSSAG00000106480	ENSSSAG00000042378	ENSSSAG00000013353	ENSSSAG00000082478	ENSSSAG00000068269	ENSSSAG00000068264	ENSSSAG00000009522	ccdc115 (ENSSSAG00000059076)	ENSSSAG00000099605	ENSSSAG00000091092	ENSSSAG00000081966	ENSSSAG00000052495	hsd17b10 (ENSSSAG00000041427)	ENSSSAG00000050346	ENSSSAG00000104261
River trout	MODERN SPECIES	23	hsd17b10 (ENSSTUG00000013339)	ENSSTUG00000013249	ENSSTUG00000013240	DNASE1L1 (ENSSTUG00000013122)	rpl10 (ENSSTUG00000013034)	FLNA (ENSSTUG00000011907)	ENSSTUG00000011848	ENSSTUG00000011837	ENSSTUG00000011748	ENSSTUG00000011737	ENSSTUG00000011728	ikbkg (ENSSTUG00000011716)	ENSSTUG00000011681	KCNA3 (ENSSTUG00000011646) #20	KCNA2 (ENSSTUG00000011637) #21	KCNA10 (ENSSTUG00000011629) #22	ENSSTUG00000011621	uba1 (ENSSTUG00000009041)	ENSSTUG00000008920	tktb (ENSSTUG00000008276)	ENSSTUG00000007782	ENSSTUG00000007737	ENSSTUG00000007728	CXXC1 (ENSSTUG00000007542)	ENSSTUG00000007521	ENSSTUG00000007512	ENSSTUG00000007506	ENSSTUG00000007504	ENSSTUG00000007487	HCFC1 (ENSSTUG00000007278)	IRAK1 (ENSSTUG00000007249)
Oncorhynchus	ANCESTRAL SPECIES	111	ENSGT00940000154955.b	ENSGT00530000063168.a.a.b.p	ENSGT00940000164454	ENSGT00940000155170.f	ENSGT00390000018621.u	ENSGT00940000156650.j.j	ENSGT00950000182846.a.a.a.a.a.b	ENSGT00390000003897.o.b	ENSGT00940000153588.b.f.a	ENSGT00390000003937	ENSGT00940000165254.d	ENSGT00940000163962	ENSGT00530000063808.a.n	ENSGT00390000007725.A.b.d.h	ENSGT00940000158688.c.d.b #21	ENSGT00940000159534.e.c #22	ENSGT00940000155545.a	ENSGT00940000160369.k.a	ENSGT00940000161969.r.a	ENSGT01020000230394.e.a.a.b.a.b.f
Rainbow trout	MODERN SPECIES	7	ENSOMYG00000077694	DNASE1L1 (ENSOMYG00000053459)	ENSOMYG00000035700	FLNA (ENSOMYG00000007274)	ENSOMYG00000071151	ENSOMYG00000074022	ENSOMYG00000005219	ENSOMYG00000067096	ENSOMYG00000061227	ENSOMYG00000063797	ENSOMYG00000064249	ENSOMYG00000057348	ENSOMYG00000039569	ENSOMYG00000076227	ENSOMYG00000011256 #21	ENSOMYG00000005093 #22	ENSOMYG00000076683	ENSOMYG00000053958	ENSOMYG00000059796	ENSOMYG00000052440	ENSOMYG00000076560	ENSOMYG00000056766	ENSOMYG00000005191	ENSOMYG00000060544	ENSOMYG00000066750	ENSOMYG00000010943	ENSOMYG00000069155	ENSOMYG00000023273	ENSOMYG00000049329	ENSOMYG00000010927	ENSOMYG00000010898
Oncorhynchus_a	ANCESTRAL SPECIES	9								ENSGT00950000182846.a.a.a.a.a.b	ENSGT00390000003897.o.b.a	ENSGT00940000153588.b.f.a	ENSGT00390000003937	ENSGT00940000163962	ENSGT00530000063808.a.n	ENSGT00390000007725.A.b.d.h	ENSGT00940000158688.c.d.b #21	ENSGT00940000159534.e.c #22	ENSGT00940000155545.a	ENSGT00940000160369.k.a	ENSGT00940000161969.r.a	ENSGT00940000159667.a.f	ENSGT00940000164755.A	ENSGT01030000234637.b.c.g.g.b	ENSGT00940000166313.b	ENSGT00940000161383.d.b.a.a	ENSGT00940000160502	ENSGT00530000063687.b.b.b.r	ENSGT00940000159438.db.a.a	ENSGT00940000157503.i.a.e	ENSGT00940000173560	ENSGT00940000160661.f	ENSGT00940000160391
Coho salmon	MODERN SPECIES	16	ENSOKIG00005006187	ENSOKIG00005006180	ENSOKIG00005006162	ENSOKIG00005047134	ENSOKIG00005047127	rpl10 (ENSOKIG00005047069)	FLNA (ENSOKIG00005046407)	ENSOKIG00005046323	ENSOKIG00005046317	ENSOKIG00005046314	ENSOKIG00005046308	ENSOKIG00005046289	ngfa (ENSOKIG00005046277)	ENSOKIG00005046271	KCNA2 (ENSOKIG00005046252) #21	KCNA10 (ENSOKIG00005046244) #22	ENSOKIG00005046239	ENSOKIG00005046189	ENSOKIG00005043929	ENSOKIG00005043780	ENSOKIG00005043495	ENSOKIG00005043462	TKTL2 (ENSOKIG00005041989)	CXXC1 (ENSOKIG00005041813)	IQSEC2 (ENSOKIG00005041655)	ENSOKIG00005041633	SYP (ENSOKIG00005041608)	ENSOKIG00005041596	HCFC1 (ENSOKIG00005041170)	ENSOKIG00005041074	mecp2 (ENSOKIG00005041056)
Chinook salmon	MODERN SPECIES	729															KCNA2 (ENSOTSG00005014506) #21	KCNA10 (ENSOTSG00005014507) #22
Salmoninae	ANCESTRAL SPECIES	1551															ENSGT00940000158688.c.d.a #21	ENSGT00940000159534.e.d #22
Salmoninae_a	ANCESTRAL SPECIES	27	ENSGT00940000169444	ENSGT00940000154102.b.a.b.a	ENSGT00950000182955.a.b.a	ENSGT01020000230394.e.a.a.b.a.b.e	ENSGT00940000161969.q	ENSGT00940000159748	ENSGT00940000160369.l	ENSGT00950000182945.b.a.a.a.b.b.c.a	ENSGT00940000165571	ENSGT00940000165405.i.a	ENSGT00940000165541.e.b	ENSGT00940000157504.d	ENSGT00390000007725.A.b.d.g	ENSGT00390000010372.p	ENSGT00940000158688.c.d.a #21	ENSGT00940000159534.e.d #22	ENSGT00550000074828.b.f	ENSGT00940000162211	ENSGT00940000157365	ENSGT00940000159939	ENSGT00940000155067.b.b	ENSGT00530000063808.a.m	ENSGT00390000000950.c.a	ENSGT00940000157025	ENSGT00390000001092	ENSGT00940000155445.q.b	ENSGT00940000167069	ENSGT00940000157506.f	ENSGT00530000063168.a.a.b.o	ENSGT00950000182989.D.a.a.b	ENSGT00940000156616.j
Oncorhynchus	ANCESTRAL SPECIES	20	ENSGT00940000158685.ib	ENSGT00940000169444	ENSGT00940000154102.b.a.b.a	ENSGT00950000182955.a.b.a	ENSGT01020000230394.e.a.a.b.a.b.e	ENSGT00940000161969.q	ENSGT00940000159748	ENSGT00940000165571	ENSGT00940000165405.i.a.c	ENSGT00940000165541.e.b	ENSGT00940000158152.a.b	ENSGT00940000157504.c.a.c	ENSGT00390000007725.A.b.d.g	ENSGT00390000010372.p	ENSGT00940000158688.c.d.a #21	ENSGT00940000159534.e.d #22	ENSGT00550000074828.b.f	ENSGT00940000162211	ENSGT00940000157365	ENSGT00940000159939	ENSGT00940000155067.b.b	ENSGT00530000063808.a.m	ENSGT00390000000950.c.a	ENSGT00940000157025	ENSGT00390000001092	ENSGT00940000155445.q.b	ENSGT01090000262593	ENSGT00940000167069	ENSGT00940000157506.f	ENSGT00530000063168.a.a.b.o	ENSGT00950000182989.D.a.a.b
Oncorhynchus_a	ANCESTRAL SPECIES	7	ENSGT00940000159438.db.a.b	ENSGT00940000157503.i.a.f	ENSGT00940000158685.ib	ENSGT00940000169444	ENSGT00940000154102.b.a.b.a	ENSGT00950000182955.a.b.a	ENSGT01020000230394.e.a.a.b.a.b.e	ENSGT00940000161969.q	ENSGT00940000165571	ENSGT00940000165405.i.a.c	ENSGT00940000158152.a.b	ENSGT00940000157504.c.a.c	ENSGT00390000007725.A.b.d.g	ENSGT00390000010372.p	ENSGT00940000158688.c.d.a #21	ENSGT00940000159534.e.d #22	ENSGT00550000074828.b.f	ENSGT00940000162211	ENSGT00940000157365	ENSGT00940000159939	ENSGT00940000155067.b.b	ENSGT00390000000950.c.a	ENSGT00940000157025	ENSGT00390000001092	ENSGT00940000155445.q.b	ENSGT01090000262593	ENSGT00940000167069	ENSGT00940000157506.f	ENSGT00530000063168.a.a.b.o	ENSGT00950000182989.D.a.a.b	ENSGT00940000156616.j
Chinook salmon	MODERN SPECIES	26	si:dkey-251i10.3 (ENSOTSG00005037292)	zbtb20 (ENSOTSG00005037482)	UPK1B (ENSOTSG00005037483)	ENSOTSG00005037486	CASR (ENSOTSG00005037489)	eif4e1b (ENSOTSG00005037491)	zgc:175280 (ENSOTSG00005037495)	ENSOTSG00005039031	ENSOTSG00005039033	abhd10a (ENSOTSG00005039038)	ENSOTSG00005039043	ENSOTSG00005039046	gtf3aa (ENSOTSG00005039049)	ENSOTSG00005039054	ENSOTSG00005039056 #21	KCNA10 (ENSOTSG00005039057) #22	ENSOTSG00005039060	GABRB3 (ENSOTSG00005039061)	ENSOTSG00005039062	ENSOTSG00005039063	ENSOTSG00005039065	ATP6V1A (ENSOTSG00005039067)	zdhhc23a (ENSOTSG00005039124)	zgc:153704 (ENSOTSG00005039127)	ENSOTSG00005039129	ENSOTSG00005039132	sat1a.2 (ENSOTSG00005039134)	prdx4 (ENSOTSG00005039157)	pdha1a (ENSOTSG00005039201)	ENSOTSG00005041602	eif1axa (ENSOTSG00005047069)
Coho salmon	MODERN SPECIES	8	ENSOKIG00005009337	ENSOKIG00005009339	ENSOKIG00005009352	arhgef3l (ENSOKIG00005009365)	uba1 (ENSOKIG00005009549)	ENSOKIG00005012447	ENSOKIG00005012460	ENSOKIG00005012485	TSHB (ENSOKIG00005012505)	ENSOKIG00005012583	NGF (ENSOKIG00005012597)	ENSOKIG00005012619	zgc:194242 (ENSOKIG00005012624)	KCNA2 (ENSOKIG00005012634) #21	ENSOKIG00005012653	KCNA10 (ENSOKIG00005012671) #22	ENSOKIG00005012683	etv7 (ENSOKIG00005012689)	ube2t (ENSOKIG00005012703)	ENSOKIG00005012716	ENSOKIG00005012736	ENSOKIG00005012769	ENSOKIG00005012850	ENSOKIG00005013021	ccnq (ENSOKIG00005013040)	RPL10L (ENSOKIG00005013056)	ENSOKIG00005026529	ATP6AP1 (ENSOKIG00005026558)	ENSOKIG00005026719	ENSOKIG00005026828	ENSOKIG00005026843
Rainbow trout	MODERN SPECIES	30	ENSOMYG00000062107	ENSOMYG00000050570	ENSOMYG00000001446	ENSOMYG00000054478	ENSOMYG00000069993	ENSOMYG00000005309	ENSOMYG00000061902	TSHB (ENSOMYG00000005878)	ENSOMYG00000066198	NGF (ENSOMYG00000012424)	ENSOMYG00000076934	ENSOMYG00000068482	ENSOMYG00000054872	ENSOMYG00000069493	ENSOMYG00000072023 #21	ENSOMYG00000006095 #22	ENSOMYG00000006039	ENSOMYG00000005980	ENSOMYG00000054511	ENSOMYG00000005961	ENSOMYG00000058998	ENSOMYG00000073164	ENSOMYG00000005328	ENSOMYG00000064245	ENSOMYG00000047937	ENSOMYG00000005395	ENSOMYG00000035596	ENSOMYG00000035666	ENSOMYG00000035679	ENSOMYG00000006237	ENSOMYG00000057805
Salmo	ANCESTRAL SPECIES	16	ENSGT00950000182955.a.b.a	ENSGT01020000230394.e.a.a.b.a.b.e	ENSGT00940000161969.q	ENSGT00940000159748	ENSGT00940000160369.l.a	ENSGT00950000182945.b.a.a.a.b.b.c.a	ENSGT00940000165571	ENSGT00940000165405.i.a	ENSGT00940000165541.e.b	ENSGT00940000165158.a.a	ENSGT00940000158152.a.b	ENSGT00940000157504.c.a.c	ENSGT00390000007725.A.b.d.g	ENSGT00390000010372.p	ENSGT00940000158688.c.d.a #21	ENSGT00940000159534.e.d #22	ENSGT00550000074828.b.f	ENSGT00940000162211	ENSGT00940000157365	ENSGT00940000159939	ENSGT00940000155067.b.b	ENSGT00530000063808.a.m	ENSGT00390000000950.c.a	ENSGT00940000157025	ENSGT00390000001092	ENSGT00940000155445.r	ENSGT00390000003897.o.a	ENSGT00940000153588.b.f.b	ENSGT00940000156650.j.i	ENSGT00390000018621.u	ENSGT00940000167069
River trout	MODERN SPECIES	20	lrrc23 (ENSSTUG00000007951)	ENSSTUG00000007936	rhoac (ENSSTUG00000007921)	arhgef3l (ENSSTUG00000007901)	uba1 (ENSSTUG00000006950)	ENSSTUG00000006927	ENSSTUG00000006900	ENSSTUG00000006887	ENSSTUG00000006878	TSHB (ENSSTUG00000006861)	ENSSTUG00000006859	ENSSTUG00000006854	ngfa (ENSSTUG00000006845)	zgc:194242 (ENSSTUG00000006837)	KCNA2 (ENSSTUG00000006804) #21	KCNA10 (ENSSTUG00000006791) #22	ENSSTUG00000006782	etv7 (ENSSTUG00000006775)	ube2t (ENSSTUG00000006752)	ENSSTUG00000006735	LGR6 (ENSSTUG00000006707)	ENSSTUG00000006700	ENSSTUG00000006697	ikbkg (ENSSTUG00000006671)	sephs3 (ENSSTUG00000006647)	ap4b1 (ENSSTUG00000006547)	ENSSTUG00000006523	ccnq (ENSSTUG00000006514)	rpl10 (ENSSTUG00000006450)	ENSSTUG00000006431	FLNA (ENSSTUG00000006344)
Atlantic salmon	MODERN SPECIES	6	ENSSSAG00000048260	ENSSSAG00000048162	ENSSSAG00000118767	ENSSSAG00000108197	ENSSSAG00000116020	arhgef3l (ENSSSAG00000083682)	ENSSSAG00000095191	ENSSSAG00000097310	ENSSSAG00000095161	ENSSSAG00000097464	ENSSSAG00000101085	ENSSSAG00000039599	ENSSSAG00000116252	KCNA3 (ENSSSAG00000039570) #20	ENSSSAG00000051627 #21	KCNA10 (ENSSSAG00000106262) #22	ENSSSAG00000050310	ube2t (ENSSSAG00000009596)	ENSSSAG00000085449	ENSSSAG00000117672	ENSSSAG00000099557	ENSSSAG00000083070	ENSSSAG00000051426	ENSSSAG00000051472	ENSSSAG00000087586	ENSSSAG00000060439	ENSSSAG00000121208	ENSSSAG00000122023	rpl10 (ENSSSAG00000051618)	ENSSSAG00000039638	ENSSSAG00000039845
Huchen	MODERN SPECIES	6633																KCNA10 (ENSHHUG00000007398) #22
Northern pike	MODERN SPECIES	11	hsd17b10 (ENSELUG00000021667)	FAM120C (ENSELUG00000021767)	slc16a1b (ENSELUG00000021804)	ENSELUG00000021821	ENSELUG00000021830	ENSELUG00000021833	ENSELUG00000032831	ENSELUG00000030261	ENSELUG00000021840	ENSELUG00000021856	ENSELUG00000027701	ENSELUG00000026244	ENSELUG00000021893	ENSELUG00000021902	ngfa (ENSELUG00000021910)	KCNA10 (ENSELUG00000021957) #22	ENSELUG00000024835	ENSELUG00000021982	ENSELUG00000022041	tktb (ENSELUG00000019943)	lrrc23 (ENSELUG00000019879)	ENSELUG00000019845	ENSELUG00000001193	ENSELUG00000019759	arhgef3l (ENSELUG00000019695)	uba1 (ENSELUG00000019644)	ENSELUG00000019590	klk6 (ENSELUG00000019538)	ENSELUG00000033316	ENSELUG00000000854	abcd1 (ENSELUG00000019257)
Osteoglossiformes	ANCESTRAL SPECIES	317							ENSGT00940000154955.c	ENSGT00940000157025	ENSGT00940000163962	ENSGT00940000158152.a.b	ENSGT00940000164224.b	ENSGT00940000157504.c.a	ENSGT00390000007725.A.b.d	ENSGT00940000160210.d.a #20	ENSGT00940000158688.a #21	ENSGT00940000159534.e #22	ENSGT00940000162211	ENSGT00390000010372	ENSGT00940000157365	ENSGT00940000159939	ENSGT00940000155067.b.b	ENSGT01030000234555.a.a.b.a.b.a.f	ENSGT00940000163467.a.b.b.a.b
Asian bonytongue	MODERN SPECIES	10	gdi1 (ENSSFOG00015000981)	atp6ap1a (ENSSFOG00015000968)	dnase1l1l (ENSSFOG00015000930)	rpl10 (ENSSFOG00015000901)	ENSSFOG00015000775	atp2b3a (ENSSFOG00015000684)	ugt5e1 (ENSSFOG00015000634)	dedd (ENSSFOG00015000600)	TSHB (ENSSFOG00015000340)	slc25a55b (ENSSFOG00015000287)	ENSSFOG00015024574	ngfa (ENSSFOG00015000164)	ENSSFOG00015032368	KCNA3 (ENSSFOG00015000139) #20	KCNA2 (ENSSFOG00015000136) #21	KCNA10 (ENSSFOG00015003292) #22	ENSSFOG00015023054	etv7 (ENSSFOG00015023048)	zgc:194242 (ENSSFOG00015024222)	ENSSFOG00015025741	ube2t (ENSSFOG00015023023)	LGR6 (ENSSFOG00015023007)	ENSSFOG00015022987	dclre1b (ENSSFOG00015022972)	ENSSFOG00015022963	ENSSFOG00015022960	TULP1 (ENSSFOG00015022949)	TEAD3 (ENSSFOG00015022910)	smpd2a (ENSSFOG00015022890)	PKP1 (ENSSFOG00015022873)	ENSSFOG00015022863
P. kingsleyae	MODERN SPECIES	29	osbpl2b (ENSPKIG00000012359)	adrm1 (ENSPKIG00000012305)	ENSPKIG00000012284	lama5 (ENSPKIG00000012223)	TAFA3 (ENSPKIG00000012169)	SLC16A1 (ENSPKIG00000012127)	ap4b1 (ENSPKIG00000012057)	ENSPKIG00000012024	ENSPKIG00000012010	slc25a55b (ENSPKIG00000011964)	ENSPKIG00000011934	ENSPKIG00000011918	ngfa (ENSPKIG00000011902)	KCNA3 (ENSPKIG00000011884) #20	KCNA2 (ENSPKIG00000011866) #21	KCNA10 (ENSPKIG00000011851) #22	etv7 (ENSPKIG00000011834)	zgc:194242 (ENSPKIG00000011817)	ube2t (ENSPKIG00000011750)	LGR6 (ENSPKIG00000011663)	ENSPKIG00000011591	ENSPKIG00000011607	ENSPKIG00000011573	ENSPKIG00000011543	TEAD3 (ENSPKIG00000011427)	smpd2a (ENSPKIG00000011322)	ENSPKIG00000011263	tnnt2a (ENSPKIG00000011216)	phlda3 (ENSPKIG00000011186)	csrp1a (ENSPKIG00000011163)	NAV1 (ENSPKIG00000010793)
Osteoglossocephalai	ANCESTRAL SPECIES	62	ENSGT00970000193609	ENSGT00940000165906	ENSGT00940000158152.a.a	ENSGT00940000164224.a	ENSGT00940000157504.c.b	ENSGT00390000007725.A.b.c	ENSGT00940000160210.c #20	ENSGT00940000157025	ENSGT00940000163962	ENSGT00940000164224.b	ENSGT00940000157504.d	ENSGT00390000007725.A.b.d	ENSGT00940000160210.d.a #20	ENSGT00940000160210.d.b #20	ENSGT00940000158688 #21	ENSGT00940000159534.f #22	ENSGT00550000074828.b	ENSGT00940000160828	ENSGT00940000162211	ENSGT00390000010372	ENSGT00940000157365	ENSGT00940000159939	ENSGT00940000155067.b.b	ENSGT01030000234555.a.a.b.a.b.a	ENSGT00940000158771	ENSGT00950000182956.b.b.b.e.a	ENSGT00390000009166	ENSGT00940000156735.d	ENSGT00940000154709.a.b.a.b	ENSGT01030000234588.a.b	ENSGT00440000039564.a.a
Clupeocephala	ANCESTRAL SPECIES	90			ENSGT00940000158152.a.b	ENSGT00940000164224.b	ENSGT00940000157504.c.a	ENSGT00940000157025	ENSGT00940000163962	ENSGT00940000157504.d	ENSGT00390000007725.A.b.d	ENSGT00940000160210.d.a #20	ENSGT00940000158688.d #21	ENSGT00940000159534.e #22	ENSGT00940000155662.f	ENSGT00940000160210.d.b #20	ENSGT00940000158688.c #21	ENSGT00940000159534.f #22	ENSGT00550000074828.b	ENSGT01030000234555.a.a.b.a.b.b	ENSGT01030000234555.a.a.b.a.b.a.c	ENSGT00940000163467.a.b.b.a.b	ENSGT00940000160828	ENSGT00940000162211	ENSGT00390000010372	ENSGT00940000157365	ENSGT00940000159939	ENSGT00940000155067.b.b	ENSGT01030000234555.a.a.b.a.b.a.d	ENSGT00940000156735.d	ENSGT00940000154709.a.b.a.b	ENSGT00730000112095	ENSGT01030000234588.a.b
Euteleosteomorpha	ANCESTRAL SPECIES	146	ENSGT00950000182945.b.a.a.a.b.b.c.a	ENSGT00940000155545.a	ENSGT00940000165571	ENSGT00940000165405	ENSGT00940000165541	ENSGT00940000158152.a.b	ENSGT00940000164224.b	ENSGT00940000157504.c.a	ENSGT00390000007725.A.b.d	ENSGT00940000160210.d.a #20	ENSGT00940000158688.d #21	ENSGT00940000159534.e #22	ENSGT00940000155662.f	ENSGT00940000160210.d.b #20	ENSGT00940000158688.c #21	ENSGT00940000159534.f #22	ENSGT00550000074828.b	ENSGT01030000234555.a.a.b.a.b.b	ENSGT01030000234555.a.a.b.a.b.a.c	ENSGT00940000163467.a.b.b.a.b	ENSGT00940000160828	ENSGT00940000162211	ENSGT00390000010372	ENSGT00940000157365	ENSGT00940000159939	ENSGT00940000155067.b.b	ENSGT01030000234555.a.a.b.a.b.a.d	ENSGT00940000156735.d	ENSGT00940000154709.a.b.a.b	ENSGT01030000234588.a.b	ENSGT00440000039564.a.a
Acanthomorphata	ANCESTRAL SPECIES	26	ENSGT00950000183119.a.a	ENSGT00940000156024.i.b	ENSGT00950000182945.b.a.a.a.a.a.a	ENSGT00940000166858	ENSGT00940000155644.a.b	ENSGT00940000155644.a.a	ENSGT00940000154955.a	ENSGT00390000003368	ENSGT00940000165906	ENSGT00940000158152.a.a	ENSGT00940000164224.a	ENSGT00940000157504.c.b	ENSGT00390000007725.A.b.c	ENSGT00940000160210.d.b #20	ENSGT00940000158688.c.e #21	ENSGT00940000159534.f #22	ENSGT00550000074828.b	ENSGT01030000234555.a.a.b.a.b.b	ENSGT01030000234555.a.a.b.a.b.a.c	ENSGT00940000158771	ENSGT00950000182956.b.b.b.e.a	ENSGT00390000009166	ENSGT00940000156735.c	ENSGT00940000154709.a.b.a.a	ENSGT01030000234588.a.a.b	ENSGT00940000156777.c	ENSGT01010000223242	ENSGT00940000156637.b	ENSGT00940000158040.d	ENSGT00940000157586.e	ENSGT00940000166065.a
Euacanthomorphacea	ANCESTRAL SPECIES	1	ENSGT00530000064134.a.b	ENSGT00950000183119.a.a	ENSGT00940000156024.i.b	ENSGT00950000182945.b.a.a.a.a.a.a	ENSGT00940000166858	ENSGT00940000155644.a.b	ENSGT00940000154955.a	ENSGT00390000003368	ENSGT00940000165906	ENSGT00940000158152.a.a	ENSGT00940000164224.a	ENSGT00940000157504.c.b	ENSGT00390000007725.A.b.c	ENSGT00940000160210.d.b #20	ENSGT00940000158688.c.e #21	ENSGT00940000159534.f #22	ENSGT00550000074828.b	ENSGT01030000234555.a.a.b.a.b.b	ENSGT01030000234555.a.a.b.a.b.a.c	ENSGT00940000158771	ENSGT00950000182956.b.b.b.e.a	ENSGT00390000009166	ENSGT00940000156735.c	ENSGT00940000154709.a.b.a.a	ENSGT01030000234588.a.a.b	ENSGT00940000156777.c	ENSGT01010000223242	ENSGT00940000156637.b	ENSGT00940000158040.d	ENSGT00940000157586.e	ENSGT00940000166065.a
Pinecone sodierfish	MODERN SPECIES	19	ncoa5 (ENSMMDG00005000714)	capza1a (ENSMMDG00005000739)	MOV10 (ENSMMDG00005000876)	ENSMMDG00005000940	ENSMMDG00005000943	TAFA3 (ENSMMDG00005000946)	slc16a1a (ENSMMDG00005000947)	sycp1 (ENSMMDG00005000954)	slc5a8l (ENSMMDG00005000972)	tshba (ENSMMDG00005000984)	slc25a55a (ENSMMDG00005000987)	tspan2a (ENSMMDG00005000997)	ngfb (ENSMMDG00005001001)	KCNA3 (ENSMMDG00005001004) #20	KCNA2 (ENSMMDG00005001006) #21	KCNA10 (ENSMMDG00005001011) #22	rplp2 (ENSMMDG00005001015)	ENSMMDG00005001019	ADORA3 (ENSMMDG00005001020)	ENSMMDG00005001024	tead3b (ENSMMDG00005001028)	smpd2a (ENSMMDG00005001033)	ENSMMDG00005001041	ENSMMDG00005001048	csrp1b (ENSMMDG00005001050)	NAV1 (ENSMMDG00005001052)	ENSMMDG00005001053	mybphb (ENSMMDG00005001055)	SYT2 (ENSMMDG00005001062)	ENSMMDG00005001064	zgc:66479 (ENSMMDG00005001066)
Percomorphaceae	ANCESTRAL SPECIES	1	ENSGT00530000064134.a.b	ENSGT00950000183119.a.a	ENSGT00940000156024.i.b	ENSGT00950000182945.b.a.a.a.a.a.a	ENSGT00940000166858	ENSGT00940000155644.a.b	ENSGT00940000154955.a	ENSGT00390000003368	ENSGT00940000165906	ENSGT00940000158152.a.a	ENSGT00940000164224.a	ENSGT00940000157504.c.b	ENSGT00390000007725.A.b.c	ENSGT00940000160210.d.b #20	ENSGT00940000158688.c.e #21	ENSGT00940000159534.f #22	ENSGT00550000074828.b	ENSGT01030000234555.a.a.b.a.b.b	ENSGT01030000234555.a.a.b.a.b.a.c	ENSGT00940000158771	ENSGT00950000182956.b.b.b.e.a	ENSGT00390000009166	ENSGT00940000156735.c	ENSGT00940000154709.a.b.a.a	ENSGT01030000234588.a.a.b	ENSGT00940000156777.c	ENSGT01010000223242	ENSGT00940000156637.b	ENSGT00940000158040.d	ENSGT00940000157586.e	ENSGT00940000166065.a
Tiger tail seahorse	MODERN SPECIES	82	ENSHCOG00000001202	ncoa5 (ENSHCOG00000001212)	ENSHCOG00000001218	ENSHCOG00000001230	TAFA3 (ENSHCOG00000001234)	ENSHCOG00000001237	slc16a1a (ENSHCOG00000001240)	ENSHCOG00000001255	slc5a8l (ENSHCOG00000001282)	tshba (ENSHCOG00000001305)	slc25a55a (ENSHCOG00000001312)	tspan2a (ENSHCOG00000001320)	ngfb (ENSHCOG00000001324)	ENSHCOG00000001330 #20	KCNA2 (ENSHCOG00000001333) #21	KCNA10 (ENSHCOG00000001335) #22	rplp2 (ENSHCOG00000001337)	ENSHCOG00000001343	ADORA3 (ENSHCOG00000001344)	ENSHCOG00000001348	tead3b (ENSHCOG00000001354)	smpd2a (ENSHCOG00000001358)	ENSHCOG00000001365	ENSHCOG00000001371	tnni1b (ENSHCOG00000001383)	csrp1b (ENSHCOG00000001389)	ENSHCOG00000001393	NAV1 (ENSHCOG00000001436)	mybphb (ENSHCOG00000000571)	SYT2 (ENSHCOG00000001474)	ENSHCOG00000001508
Percomorphaceae_B	ANCESTRAL SPECIES	3	ENSGT00950000183119.a.a	ENSGT00940000156024.i.b	ENSGT00950000182945.b.a.a.a.a.a.a	ENSGT00940000166858	ENSGT00940000155644.a.b	ENSGT00940000154955.a	ENSGT00390000003368	ENSGT00970000193581	ENSGT00940000165906	ENSGT00940000158152.a.a	ENSGT00940000164224.a	ENSGT00940000157504.c.b	ENSGT00390000007725.A.b.c	ENSGT00940000160210.d.b #20	ENSGT00940000158688.c.e #21	ENSGT00940000159534.f #22	ENSGT00550000074828.b	ENSGT01030000234555.a.a.b.a.b.b	ENSGT01030000234555.a.a.b.a.b.a.c	ENSGT00940000158771	ENSGT00950000182956.b.b.b.e.a	ENSGT00390000009166	ENSGT00940000156735.c	ENSGT00940000154709.a.b.a.a	ENSGT01030000234588.a.a.b	ENSGT00940000156777.c	ENSGT01010000223242	ENSGT00940000156637.b	ENSGT00940000158040.d	ENSGT00940000157586.e	ENSGT00940000166065.a
Ovalentaria	ANCESTRAL SPECIES	2	ENSGT00950000183119.a.a	ENSGT00940000156024.i.b	ENSGT00950000182945.b.a.a.a.a.a.a	ENSGT00940000166858	ENSGT00940000155644.a.b	ENSGT00940000154955.a	ENSGT00390000003368	ENSGT00970000193581	ENSGT00940000165906	ENSGT00940000158152.a.a	ENSGT00940000164224.a	ENSGT00940000157504.c.b	ENSGT00390000007725.A.b.c	ENSGT00940000160210.d.b #20	ENSGT00940000158688.c.e #21	ENSGT00940000159534.f #22	ENSGT00550000074828.b	ENSGT01030000234555.a.a.b.a.b.b	ENSGT01030000234555.a.a.b.a.b.a.c	ENSGT00940000158771	ENSGT00950000182956.b.b.b.e.a	ENSGT00390000009166	ENSGT00940000156735.c	ENSGT00940000154709.a.b.a.a	ENSGT01030000234588.a.a.b	ENSGT00940000156777.c	ENSGT01010000223242	ENSGT00940000156637.b	ENSGT00940000158040.d	ENSGT00940000157586.e	ENSGT00940000166065.a
Atherinomorphae	ANCESTRAL SPECIES	2	ENSGT00950000183119.a.a	ENSGT00940000156024.i.b	ENSGT00950000182945.b.a.a.a.a.a.a	ENSGT00940000166858	ENSGT00940000155644.a.b	ENSGT00940000154955.a	ENSGT00390000003368	ENSGT00970000193581	ENSGT00940000165906	ENSGT00940000158152.a.a	ENSGT00940000164224.a	ENSGT00940000157504.c.b	ENSGT00390000007725.A.b.c.f	ENSGT00940000160210.d.b #20	ENSGT00940000158688.c.e #21	ENSGT00940000159534.f #22	ENSGT00550000074828.b	ENSGT01030000234555.a.a.b.a.b.b	ENSGT01030000234555.a.a.b.a.b.a.c	ENSGT00940000158771	ENSGT00950000182956.b.b.b.e.a	ENSGT00390000009166	ENSGT00940000156735.c	ENSGT00940000154709.a.b.a.a	ENSGT01030000234588.a.a.b	ENSGT00940000156777.c	ENSGT01010000223242	ENSGT00940000156637.b	ENSGT00940000158040.d	ENSGT00940000157586.e	ENSGT00940000166065.a
Cyprinodontiformes	ANCESTRAL SPECIES	2	ENSGT00530000064134.a.b	ENSGT00940000156024.i.b	ENSGT00950000182945.b.a.a.a.a.a.a	ENSGT00940000166858	ENSGT00940000155644.a.b	ENSGT00940000154955.a	ENSGT00390000003368	ENSGT00970000193581	ENSGT00940000165906	ENSGT00940000158152.a.a	ENSGT00940000164224.a	ENSGT00940000157504.c.b	ENSGT00390000007725.A.b.c.f	ENSGT00940000160210.d.b #20	ENSGT00940000158688.c.e #21	ENSGT00940000159534.f #22	ENSGT00550000074828.b	ENSGT01030000234555.a.a.b.a.b.b	ENSGT01030000234555.a.a.b.a.b.a.c	ENSGT00940000158771	ENSGT00950000182956.b.b.b.e.a	ENSGT00390000009166	ENSGT00940000156735.c	ENSGT00940000154709.a.b.a.a	ENSGT01030000234588.a.a.b	ENSGT00940000156777.c	ENSGT01010000223242	ENSGT00940000156637.b	ENSGT00940000158040.d	ENSGT00940000157586.e	ENSGT00940000166065.a
Aplocheiloidei	ANCESTRAL SPECIES	10	ENSGT00530000064134.a.b	ENSGT00940000156024.i.b	ENSGT00950000182945.b.a.a.a.a.a.a	ENSGT00940000166858	ENSGT00940000155644.a.b	ENSGT00940000154955.a	ENSGT00390000003368	ENSGT00970000193581	ENSGT00940000165906	ENSGT00940000158152.a.a	ENSGT00940000164224.a	ENSGT00940000157504.c.b	ENSGT00390000007725.A.b.c.f	ENSGT00940000160210.d.b #20	ENSGT00940000158688.c.e #21	ENSGT00940000159534.f #22	ENSGT00550000074828.b	ENSGT01030000234555.a.a.b.a.b.b	ENSGT01030000234555.a.a.b.a.b.a.c	ENSGT00940000158771	ENSGT00950000182956.b.b.b.e.a	ENSGT00390000009166	ENSGT00940000156735.c	ENSGT00940000154709.a.b.a.a	ENSGT01030000234588.a.a.b	ENSGT00940000156777.c	ENSGT00940000156637.b	ENSGT00940000158040.d	ENSGT00940000157586.e	ENSGT00940000166065.a	ENSGT00940000160123.e.b.a.a.a
Mangrove rivulus	MODERN SPECIES	11	ncoa5 (ENSKMAG00000015146)	MOV10 (ENSKMAG00000015175)	ENSKMAG00000015206	ENSKMAG00000015227	TAFA3 (ENSKMAG00000015250)	slc16a1a (ENSKMAG00000015274)	sycp1 (ENSKMAG00000015297)	ENSKMAG00000015389	slc5a8l (ENSKMAG00000015410)	tshba (ENSKMAG00000015445)	slc25a55a (ENSKMAG00000015465)	tspan2a (ENSKMAG00000015495)	ngfb (ENSKMAG00000015520)	KCNA3 (ENSKMAG00000015537) #20	KCNA2 (ENSKMAG00000015562) #21	KCNA10 (ENSKMAG00000015569) #22	rplp2 (ENSKMAG00000015576)	ENSKMAG00000015583	ADORA3 (ENSKMAG00000015595)	ENSKMAG00000015621	tead3b (ENSKMAG00000015659)	smpd2a (ENSKMAG00000015753)	ENSKMAG00000015800	ENSKMAG00000015840	tnni1b (ENSKMAG00000015857)	csrp1b (ENSKMAG00000015872)	NAV1 (ENSKMAG00000015887)	mybphb (ENSKMAG00000015946)	SYT2 (ENSKMAG00000016008)	ENSKMAG00000016052	ENSKMAG00000016084
Turquoise killifish	MODERN SPECIES	1619	ENSNFUG00015013674	ENSNFUG00015013598	ENSNFUG00015013590	ENSNFUG00015013538	ENSNFUG00015013513	ENSNFUG00015013510	SLC16A1 (ENSNFUG00015013496)	sycp1 (ENSNFUG00015013481)	slc5a8l (ENSNFUG00015013015)	tshba (ENSNFUG00015012950)	slc25a55a (ENSNFUG00015012930)	TSPAN2 (ENSNFUG00015012922)	ngfb (ENSNFUG00015012914)	KCNA3 (ENSNFUG00015012907) #20	KCNA2 (ENSNFUG00015012896) #21	KCNA10 (ENSNFUG00015012889) #22	RPLP2 (ENSNFUG00015012879)	CR847944.3 (ENSNFUG00015012873)	TULP1 (ENSNFUG00015012867)	tead3b (ENSNFUG00015012808)	SMPD2 (ENSNFUG00015012700)	PKP1B (ENSNFUG00015012667)	ENSNFUG00015012657	tnni1b (ENSNFUG00015012645)	csrp1b (ENSNFUG00015012634)	ENSNFUG00015012620	ENSNFUG00015012617	NAV1 (ENSNFUG00015012296)	MYBPHB (ENSNFUG00015012140)	ENSNFUG00015012117	SYT2 (ENSNFUG00015012105)
Cyprinodontoidei	ANCESTRAL SPECIES	4	ENSGT00530000064134.a.b	ENSGT00940000156024.i.b	ENSGT00950000182945.b.a.a.a.a.a.a	ENSGT00940000166858	ENSGT00940000155644.a.b	ENSGT00940000154955.a	ENSGT00390000003368	ENSGT00970000193581	ENSGT00940000165906	ENSGT00940000158152.a.a	ENSGT00940000164224.a	ENSGT00940000157504.c.b	ENSGT00390000007725.A.b.c.f	ENSGT00940000160210.d.b #20	ENSGT00940000158688.c.e #21	ENSGT00940000159534.f #22	ENSGT00550000074828.b	ENSGT01030000234555.a.a.b.a.b.b	ENSGT01030000234555.a.a.b.a.b.a.c.f	ENSGT00940000158771	ENSGT00950000182956.b.b.b.e.a	ENSGT00390000009166	ENSGT00940000156735.c	ENSGT00940000154709.a.b.a.a	ENSGT01030000234588.a.a.b	ENSGT00940000156777.c	ENSGT01010000223242	ENSGT00940000156637.b	ENSGT00940000158040.d	ENSGT00940000157586.e	ENSGT00940000166065.a
Poeciliinae	ANCESTRAL SPECIES	4	ENSGT00530000064134.a.b	ENSGT00940000156024.i.b	ENSGT00950000182945.b.a.a.a.a.a.a	ENSGT00940000166858	ENSGT00940000155644.a.b	ENSGT00940000154955.a	ENSGT00390000003368	ENSGT00970000193581	ENSGT00940000165906	ENSGT00940000158152.a.a	ENSGT00940000164224.a	ENSGT00940000157504.c.b	ENSGT00390000007725.A.b.c.f	ENSGT00940000160210.d.b #20	ENSGT00940000158688.c.e #21	ENSGT00940000159534.f #22	ENSGT00550000074828.b	ENSGT01030000234555.a.a.b.a.b.b	ENSGT01030000234555.a.a.b.a.b.a.c.f	ENSGT00940000158771	ENSGT00950000182956.b.b.b.e.a	ENSGT00390000009166	ENSGT00940000156735.c	ENSGT00940000154709.a.b.a.a	ENSGT01030000234588.a.a.b	ENSGT00940000156777.c	ENSGT00940000156637.b	ENSGT00940000158040.d	ENSGT00940000157586.e	ENSGT00940000166065.a	ENSGT00940000160123.e.b.a.a.a
Poecilia	ANCESTRAL SPECIES	25	ENSGT00940000165387.b	ENSGT00530000064134.a.b	ENSGT00940000156024.i.b	ENSGT00950000182945.b.a.a.a.a.a.a	ENSGT00940000166858	ENSGT00940000155644.a.b	ENSGT00940000154955.a	ENSGT00390000003368	ENSGT00940000165906	ENSGT00940000158152.a.a	ENSGT00940000164224.a	ENSGT00940000157504.c.b	ENSGT00390000007725.A.b.c.f	ENSGT00940000160210.d.b #20	ENSGT00940000158688.c.e #21	ENSGT00940000159534.f #22	ENSGT00550000074828.b	ENSGT01030000234555.a.a.b.a.b.b	ENSGT01030000234555.a.a.b.a.b.a.c.f	ENSGT00940000158771	ENSGT00950000182956.b.b.b.e.a	ENSGT00390000009166	ENSGT00940000156735.c	ENSGT00940000154709.a.b.a.a	ENSGT01030000234588.a.a.b	ENSGT00940000156777.c	ENSGT00940000156637.b	ENSGT00940000158040.d	ENSGT00940000157586.e	ENSGT00940000176218	ENSGT00940000160123.e.b.a.a.a
NAME_6	ANCESTRAL SPECIES	43	ENSGT00940000165387.b	ENSGT00530000064134.a.b	ENSGT00940000156024.i.b	ENSGT00950000182945.b.a.a.a.a.a.a	ENSGT00940000166858	ENSGT00940000155644.a.b	ENSGT00940000154955.a	ENSGT00390000003368	ENSGT00940000165906	ENSGT00940000158152.a.a	ENSGT00940000164224.a	ENSGT00940000157504.c.b	ENSGT00390000007725.A.b.c.f	ENSGT00940000160210.d.b #20	ENSGT00940000158688.c.e #21	ENSGT00940000159534.f #22	ENSGT00550000074828.b	ENSGT01030000234555.a.a.b.a.b.b	ENSGT01030000234555.a.a.b.a.b.a.c.f	ENSGT00940000158771	ENSGT00950000182956.b.b.b.e.a	ENSGT00390000009166	ENSGT00940000156735.c	ENSGT00940000154709.a.b.a.a	ENSGT01030000234588.a.a.b	ENSGT00940000156777.c	ENSGT00940000156637.b	ENSGT00940000158040.d	ENSGT00940000157586.e	ENSGT00940000176218	ENSGT00940000160123.e.b.a.a.a
Amazon molly	MODERN SPECIES	270	ncoa5 (ENSPFOG00000013360)	MOV10 (ENSPFOG00000013423)	ENSPFOG00000013593	ENSPFOG00000013614	TAFA3 (ENSPFOG00000013662)	slc16a1a (ENSPFOG00000013671)	ENSPFOG00000024414	slc5a8l (ENSPFOG00000013725)	tshba (ENSPFOG00000013784)	slc25a55a (ENSPFOG00000013801)	slc25a55a (ENSPFOG00000013845)	tspan2a (ENSPFOG00000013913)	ngfb (ENSPFOG00000020890)	KCNA3 (ENSPFOG00000020891) #20	KCNA2 (ENSPFOG00000020892) #21	KCNA10 (ENSPFOG00000020893) #22	rplp2 (ENSPFOG00000013951)	ENSPFOG00000023314	ENSPFOG00000013966	ADORA3 (ENSPFOG00000013970)	ENSPFOG00000013977	tead3b (ENSPFOG00000013997)	smpd2a (ENSPFOG00000014164)	ENSPFOG00000014167	ENSPFOG00000014199	tnni1b (ENSPFOG00000014255)	csrp1b (ENSPFOG00000014277)	NAV1 (ENSPFOG00000014306)	mybphb (ENSPFOG00000014669)	SYT2 (ENSPFOG00000014693)	ENSPFOG00000023959
Sailfin molly	MODERN SPECIES	633											slc25a55a (ENSPLAG00000015123)	tspan2a (ENSPLAG00000015100)	ngfb (ENSPLAG00000015077)	KCNA3 (ENSPLAG00000015074) #20	KCNA2 (ENSPLAG00000015062) #21	KCNA10 (ENSPLAG00000015047) #22	rplp2 (ENSPLAG00000015037)	ENSPLAG00000015025	ADORA3 (ENSPLAG00000015002)	ENSPLAG00000014987	tead3b (ENSPLAG00000014972)	smpd2a (ENSPLAG00000014950)	ENSPLAG00000014940	ENSPLAG00000014932	tnni1b (ENSPLAG00000014830)	csrp1b (ENSPLAG00000014810)
Guppy	MODERN SPECIES	457	ENSPREG00000011141	ENSPREG00000011183	ncoa5 (ENSPREG00000011259)	MOV10 (ENSPREG00000011301)	ENSPREG00000011426	ENSPREG00000011764	TAFA3 (ENSPREG00000011793)	slc16a1a (ENSPREG00000011815)	slc5a8l (ENSPREG00000011832)	tshba (ENSPREG00000011859)	slc25a55a (ENSPREG00000011876)	tspan2a (ENSPREG00000011900)	ngfb (ENSPREG00000011920)	KCNA3 (ENSPREG00000011932) #20	KCNA2 (ENSPREG00000011945) #21	KCNA10 (ENSPREG00000011972) #22	rplp2 (ENSPREG00000011980)	ENSPREG00000012012	ADORA3 (ENSPREG00000012070)	ENSPREG00000012085	ENSPREG00000012151	tead3b (ENSPREG00000012159)	smpd2a (ENSPREG00000012181)	PKP1 (ENSPREG00000012195)	ENSPREG00000012219	tnni1b (ENSPREG00000012241)	csrp1b (ENSPREG00000012264)	NAV1 (ENSPREG00000012290)	mybphb (ENSPREG00000012361)	SYT2 (ENSPREG00000012505)	ENSPREG00000012569
Platyfish	MODERN SPECIES	12	ENSXMAG00000010183	ncoa5 (ENSXMAG00000014704)	MOV10 (ENSXMAG00000000875)	ENSXMAG00000022488	ENSXMAG00000004691	TAFA3 (ENSXMAG00000027471)	slc16a1a (ENSXMAG00000002740)	sycp1 (ENSXMAG00000002742)	ENSXMAG00000030044	slc5a8l (ENSXMAG00000002764)	tshba (ENSXMAG00000027462)	slc25a55a (ENSXMAG00000002805)	tspan2a (ENSXMAG00000002816)	ngfb (ENSXMAG00000020357)	KCNA3 (ENSXMAG00000019922) #20	KCNA10 (ENSXMAG00000010891) #22	rplp2 (ENSXMAG00000011027)	ENSXMAG00000022480	ENSXMAG00000025762	ADORA3 (ENSXMAG00000022989)	ENSXMAG00000023370	ENSXMAG00000018117	tead3b (ENSXMAG00000018099)	smpd2a (ENSXMAG00000018088)	PKP1 (ENSXMAG00000018083)	ENSXMAG00000018046	tnni1b (ENSXMAG00000018041)	csrp1b (ENSXMAG00000018035)	NAV1 (ENSXMAG00000018024)	mybphb (ENSXMAG00000018011)	SYT2 (ENSXMAG00000017999)
NAME_4	ANCESTRAL SPECIES	37	ENSGT00940000165387.b	ENSGT00530000064134.a.b	ENSGT00940000156024.i.b	ENSGT00950000182945.b.a.a.a.a.a.a	ENSGT00940000166858	ENSGT00940000155644.a.b	ENSGT00940000154955.a	ENSGT00390000003368	ENSGT00940000165906	ENSGT00940000158152.a.a	ENSGT00940000164224.a	ENSGT00940000157504.c.b	ENSGT00390000007725.A.b.c.f	ENSGT00940000160210.d.b #20	ENSGT00940000158688.c.e #21	ENSGT00940000159534.f #22	ENSGT00550000074828.b	ENSGT01030000234555.a.a.b.a.b.b	ENSGT01030000234555.a.a.b.a.b.a.c.f	ENSGT00940000158771	ENSGT00950000182956.b.b.b.e.a	ENSGT00390000009166	ENSGT00940000156735.c	ENSGT00940000154709.a.b.a.a	ENSGT01030000234588.a.a.b	ENSGT00940000156777.c	ENSGT01010000223242	ENSGT00940000156637.b	ENSGT00940000158040.d	ENSGT00940000157586.e	ENSGT00940000166065.a
Sheepshead minnow	MODERN SPECIES	1184							slc16a1a (ENSCVAG00000011573)	ENSCVAG00000011554	slc5a8l (ENSCVAG00000011530)	tshba (ENSCVAG00000011292)	slc25a55a (ENSCVAG00000011252)	tspan2a (ENSCVAG00000011221)	ngfb (ENSCVAG00000011215)	KCNA3 (ENSCVAG00000011204) #20	KCNA2 (ENSCVAG00000011200) #21	KCNA10 (ENSCVAG00000011151) #22	rplp2 (ENSCVAG00000011146)	ENSCVAG00000011138	ENSCVAG00000011132
Mummichog	MODERN SPECIES	2219	ENSFHEG00000017977	ENSFHEG00000017967	ncoa5 (ENSFHEG00000017906)	MOV10 (ENSFHEG00000017889)	ENSFHEG00000017878	ENSFHEG00000017858	TAFA3 (ENSFHEG00000017833)	slc16a1a (ENSFHEG00000017815)	sycp1 (ENSFHEG00000017806)	slc5a8l (ENSFHEG00000000456)	tshba (ENSFHEG00000017718)	slc25a55a (ENSFHEG00000017711)	tspan2a (ENSFHEG00000017683)	ngfb (ENSFHEG00000017645)	KCNA2 (ENSFHEG00000017631) #21	KCNA10 (ENSFHEG00000000447) #22	rplp2 (ENSFHEG00000017602)	ENSFHEG00000000445	ADORA3 (ENSFHEG00000017578)	TULP1 (ENSFHEG00000017564)	tead3b (ENSFHEG00000017537)	smpd2a (ENSFHEG00000017395)	ENSFHEG00000017390	ENSFHEG00000017375	tnni1b (ENSFHEG00000017364)	csrp1b (ENSFHEG00000000435)	ENSFHEG00000017309	NAV1 (ENSFHEG00000017293)	mybphb (ENSFHEG00000017210)	SYT2 (ENSFHEG00000017200)	ENSFHEG00000017103
Oryzias	ANCESTRAL SPECIES	1	ENSGT00530000064134.a.b	ENSGT00950000183119.a.a	ENSGT00940000156024.i.b	ENSGT00950000182945.b.a.a.a.a.a.a	ENSGT00940000166858	ENSGT00940000155644.a.b	ENSGT00940000154955.a	ENSGT00390000003368	ENSGT00940000165906	ENSGT00940000158152.a.a	ENSGT00940000164224.a	ENSGT00940000157504.c.b	ENSGT00390000007725.A.b.c.f	ENSGT00940000160210.d.b #20	ENSGT00940000158688.c.e #21	ENSGT00940000159534.f #22	ENSGT00550000074828.b	ENSGT01030000234555.a.a.b.a.b.b	ENSGT00940000158771	ENSGT00950000182956.b.b.b.e.a	ENSGT00390000009166	ENSGT00940000156735.c	ENSGT00940000154709.a.b.a.a	ENSGT00940000161168	ENSGT00390000002689	ENSGT00940000157014.f	ENSGT00390000001562	ENSGT01050000244866.D.b.a	ENSGT00950000182978.A.a.b.b	ENSGT00390000010923	ENSGT00940000160402
Oryzias_b	ANCESTRAL SPECIES	3	ENSGT00530000064134.a.b	ENSGT00950000183119.a.a	ENSGT00940000156024.i.b	ENSGT00950000182945.b.a.a.a.a.a.a	ENSGT00940000166858	ENSGT00940000155644.a.b	ENSGT00940000154955.a	ENSGT00390000003368	ENSGT00940000165906	ENSGT00940000158152.a.a	ENSGT00940000164224.a	ENSGT00940000157504.c.b	ENSGT00390000007725.A.b.c.f	ENSGT00940000160210.d.b #20	ENSGT00940000158688.c.e #21	ENSGT00940000159534.f #22	ENSGT00550000074828.b	ENSGT01030000234555.a.a.b.a.b.b	ENSGT00940000158771	ENSGT00950000182956.b.b.b.e.a	ENSGT00390000009166	ENSGT00940000156735.c	ENSGT00940000154709.a.b.a.a	ENSGT00940000161168	ENSGT00390000002689	ENSGT00940000157014.f	ENSGT00390000001562	ENSGT01050000244866.D.b.a	ENSGT00950000182978.A.a.b.b	ENSGT00940000160402	ENSGT00390000010923
Indian medaka	MODERN SPECIES	8	capza1a (ENSOMEG00000013991)	MOV10 (ENSOMEG00000014074)	ENSOMEG00000014119	ENSOMEG00000014185	ENSOMEG00000014203	TAFA3 (ENSOMEG00000014219)	slc16a1a (ENSOMEG00000014265)	sycp1 (ENSOMEG00000014380)	slc5a8l (ENSOMEG00000014440)	tshba (ENSOMEG00000014460)	slc25a55a (ENSOMEG00000014511)	tspan2a (ENSOMEG00000014540)	ngfb (ENSOMEG00000014559)	KCNA3 (ENSOMEG00000014569) #20	KCNA2 (ENSOMEG00000014579) #21	KCNA10 (ENSOMEG00000014585) #22	rplp2 (ENSOMEG00000014592)	ENSOMEG00000014630	ENSOMEG00000014676	ENSOMEG00000000369	ENSOMEG00000014730	ENSOMEG00000014759	ENSOMEG00000000888	ENSOMEG00000014850	ENSOMEG00000014925	ENSOMEG00000014986	ENSOMEG00000015011	ENSOMEG00000015040	ENSOMEG00000015103	ENSOMEG00000015147	ENSOMEG00000000390
Javanese ricefish	MODERN SPECIES	19	ENSOJAG00000011554	capza1a (ENSOJAG00000012660)	MOV10 (ENSOJAG00000013444)	ENSOJAG00000013542	ENSOJAG00000013572	TAFA3 (ENSOJAG00000013610)	ENSOJAG00000013621	slc16a1a (ENSOJAG00000013645)	slc5a8l (ENSOJAG00000013717)	tshba (ENSOJAG00000014020)	slc25a55a (ENSOJAG00000014031)	tspan2a (ENSOJAG00000014063)	ngfb (ENSOJAG00000014081)	KCNA3 (ENSOJAG00000014102) #20	KCNA2 (ENSOJAG00000014121) #21	KCNA10 (ENSOJAG00000014137) #22	rplp2 (ENSOJAG00000014146)	ENSOJAG00000014156	ENSOJAG00000014183	tead3b (ENSOJAG00000014640)	smpd2a (ENSOJAG00000014780)	ENSOJAG00000014805	ENSOJAG00000014821	rdh5 (ENSOJAG00000015049)	bloc1s1 (ENSOJAG00000015055)	itcha (ENSOJAG00000015231)	pxmp4 (ENSOJAG00000017570)	tgm5l (ENSOJAG00000017581)	eya2 (ENSOJAG00000017619)	rtf2 (ENSOJAG00000017988)	GCNT7 (ENSOJAG00000017996)
Oryzias_a	ANCESTRAL SPECIES	5	ENSGT00530000064134.a.b	ENSGT00950000183119.a.a	ENSGT00940000156024.i.b	ENSGT00950000182945.b.a.a.a.a.a.a	ENSGT00940000166858	ENSGT00940000155644.a.b	ENSGT00940000154955.a	ENSGT00390000003368	ENSGT00940000165906	ENSGT00940000158152.a.a	ENSGT00940000164224.a	ENSGT00940000157504.c.b	ENSGT00390000007725.A.b.c.f	ENSGT00940000160210.d.b #20	ENSGT00940000158688.c.e #21	ENSGT00940000159534.f #22	ENSGT00550000074828.b	ENSGT01030000234555.a.a.b.a.b.b	ENSGT00940000158771	ENSGT00950000182956.b.b.b.e.a	ENSGT00390000009166	ENSGT00940000156735.c	ENSGT00940000154709.a.b.a.a	ENSGT01090000260059.a.b.b.a.a.a.a.a.a.b.a.h.a.b.b.b	ENSGT00940000161168	ENSGT00390000002689	ENSGT00940000157014.f	ENSGT00390000001562	ENSGT01050000244866.D.b.a	ENSGT00950000182978.A.a.b.b	ENSGT00390000010923
Japanese Medaka HdrR	MODERN SPECIES	19	cyp24a1 (ENSORLG00000006686)	ENSORLG00000006661	ENSORLG00000029773	ENSORLG00000006643	ncoa5 (ENSORLG00000006579)	ENSORLG00000026516	TAFA3 (ENSORLG00000021803)	slc16a1a (ENSORLG00000006543)	sycp1 (ENSORLG00000006520)	slc5a8l (ENSORLG00000006499)	tshba (ENSORLG00000029251)	slc25a55a (ENSORLG00000006483)	tspan2a (ENSORLG00000006458)	ngfb (ENSORLG00000006424)	KCNA2 (ENSORLG00000006419) #21	ENSORLG00000006413 #22	rplp2 (ENSORLG00000006409)	ENSORLG00000006400	ENSORLG00000030166	ENSORLG00000006385	tead3b (ENSORLG00000006370)	smpd2a (ENSORLG00000006334)	ENSORLG00000006317	ENSORLG00000006314	ENSORLG00000028344	rdh5 (ENSORLG00000006299)	bloc1s1 (ENSORLG00000006284)	itcha (ENSORLG00000006280)	pxmp4 (ENSORLG00000027794)	tgm5l (ENSORLG00000006224)	eya2 (ENSORLG00000006206)
Chinese medaka	MODERN SPECIES	578							slc16a1a (ENSOSIG00000019795)	sycp1 (ENSOSIG00000019796)	slc5a8l (ENSOSIG00000019809)	tshba (ENSOSIG00000020014)	slc25a55a (ENSOSIG00000020019)	tspan2a (ENSOSIG00000020023)	ngfb (ENSOSIG00000020025)	KCNA3 (ENSOSIG00000020027) #20	KCNA2 (ENSOSIG00000020030) #21	KCNA10 (ENSOSIG00000020031) #22	rplp2 (ENSOSIG00000020032)	ENSOSIG00000020033	ENSOSIG00000020044	tead3b (ENSOSIG00000020135)	smpd2a (ENSOSIG00000020190)	ENSOSIG00000020193	ENSOSIG00000020197	rdh5 (ENSOSIG00000020201)	bloc1s1 (ENSOSIG00000020204)	itcha (ENSOSIG00000020238)	pxmp4 (ENSOSIG00000020502)	tgm5l (ENSOSIG00000020505)	eya2 (ENSOSIG00000020509)	rtf2 (ENSOSIG00000020513)
Ovalentaria_B	ANCESTRAL SPECIES	5	ENSGT00950000183119.a.a	ENSGT00940000156024.i.b	ENSGT00950000182945.b.a.a.a.a.a.a	ENSGT00940000166858	ENSGT00940000155644.a.b	ENSGT00940000154955.a	ENSGT00390000003368	ENSGT00970000193581	ENSGT00940000165906	ENSGT00940000158152.a.a	ENSGT00940000164224.a	ENSGT00940000157504.c.b	ENSGT00390000007725.A.b.c	ENSGT00940000160210.d.b #20	ENSGT00940000158688.c.e #21	ENSGT00940000159534.f #22	ENSGT00550000074828.b	ENSGT01030000234555.a.a.b.a.b.b	ENSGT01030000234555.a.a.b.a.b.a.c	ENSGT00940000158771	ENSGT00950000182956.b.b.b.e.a	ENSGT00390000009166	ENSGT00940000156735.c	ENSGT00940000154709.a.b.a.a	ENSGT01030000234588.a.a.b	ENSGT00940000156777.c	ENSGT00940000156637.b	ENSGT00940000158040.d	ENSGT00940000157586.e	ENSGT00940000166065.a	ENSGT00940000178767
Cichlidae	ANCESTRAL SPECIES	1	ENSGT00530000064134.a.b	ENSGT00950000183119.a.a	ENSGT00940000156024.i.b	ENSGT00950000182945.b.a.a.a.a.a.a	ENSGT00940000166858	ENSGT00940000155644.a.b	ENSGT00940000154955.a	ENSGT00390000003368	ENSGT00940000165906	ENSGT00940000158152.a.a	ENSGT00940000164224.a	ENSGT00940000157504.c.b	ENSGT00390000007725.A.b.c	ENSGT00940000160210.d.b #20	ENSGT00940000158688.c.e #21	ENSGT00940000159534.f #22	ENSGT00550000074828.b	ENSGT01030000234555.a.a.b.a.b.b	ENSGT01030000234555.a.a.b.a.b.a.c.n	ENSGT00940000158771	ENSGT00950000182956.b.b.b.e.a	ENSGT00390000009166	ENSGT00940000156735.c	ENSGT00940000154709.a.b.a.a	ENSGT01030000234588.a.a.b	ENSGT00940000156777.c	ENSGT00940000156637.b	ENSGT00940000158040.d	ENSGT00940000157586.e	ENSGT00940000166065.a	ENSGT00940000160123.e.b.a.a.a
Pseudocrenilabrinae	ANCESTRAL SPECIES	4	ENSGT00530000064134.a.b	ENSGT00950000183119.a.a	ENSGT00940000156024.i.b	ENSGT00950000182945.b.a.a.a.a.a.a	ENSGT00940000166858	ENSGT00940000155644.a.b	ENSGT00940000154955.a	ENSGT00390000003368	ENSGT00940000165906	ENSGT00940000158152.a.a	ENSGT00940000164224.a	ENSGT00940000157504.c.b	ENSGT00390000007725.A.b.c	ENSGT00940000160210.d.b #20	ENSGT00940000158688.c.e #21	ENSGT00940000159534.f #22	ENSGT00550000074828.b	ENSGT01030000234555.a.a.b.a.b.b	ENSGT01030000234555.a.a.b.a.b.a.c.n	ENSGT00940000158771	ENSGT00950000182956.b.b.b.e.a	ENSGT00390000009166	ENSGT00940000156735.c	ENSGT00940000154709.a.b.a.a	ENSGT01030000234588.a.a.b	ENSGT00940000156777.c	ENSGT00940000156637.b	ENSGT00940000158040.d	ENSGT00940000157586.e	ENSGT00940000166065.a	ENSGT00940000160123.e.b.a.a.a
Pseudocrenilabrinae_A	ANCESTRAL SPECIES	2	ENSGT00530000064134.a.b	ENSGT00950000183119.a.a	ENSGT00940000156024.i.b	ENSGT00950000182945.b.a.a.a.a.a.a	ENSGT00940000166858	ENSGT00940000155644.a.b	ENSGT00940000154955.a	ENSGT00390000003368	ENSGT00940000165906	ENSGT00940000158152.a.a	ENSGT00940000164224.a	ENSGT00940000157504.c.b	ENSGT00390000007725.A.b.c	ENSGT00940000160210.d.b #20	ENSGT00940000158688.c.e #21	ENSGT00940000159534.f #22	ENSGT00550000074828.b	ENSGT01030000234555.a.a.b.a.b.b	ENSGT01030000234555.a.a.b.a.b.a.c.n	ENSGT00940000158771	ENSGT00950000182956.b.b.b.e.a	ENSGT00390000009166	ENSGT00940000156735.c	ENSGT00940000154709.a.b.a.a	ENSGT01030000234588.a.a.b	ENSGT00940000156777.c	ENSGT00940000156637.b	ENSGT00940000158040.d	ENSGT00940000157586.e	ENSGT00940000166065.a	ENSGT00940000160123.e.b.a.a.a
Haplochromini	ANCESTRAL SPECIES	1	ENSGT00530000064134.a.b	ENSGT00950000183119.a.a	ENSGT00940000156024.i.b	ENSGT00950000182945.b.a.a.a.a.a.a	ENSGT00940000166858	ENSGT00940000155644.a.b	ENSGT00940000154955.a	ENSGT00390000003368	ENSGT00940000165906	ENSGT00940000158152.a.a	ENSGT00940000164224.a	ENSGT00940000157504.c.b	ENSGT00390000007725.A.b.c	ENSGT00940000160210.d.b #20	ENSGT00940000158688.c.e #21	ENSGT00940000159534.f #22	ENSGT00550000074828.b	ENSGT01030000234555.a.a.b.a.b.b	ENSGT01030000234555.a.a.b.a.b.a.c.n	ENSGT00940000158771	ENSGT00950000182956.b.b.b.e.a	ENSGT00390000009166	ENSGT00940000156735.c	ENSGT00940000154709.a.b.a.a	ENSGT01030000234588.a.a.b	ENSGT00940000156777.c	ENSGT00940000156637.b	ENSGT00940000158040.d	ENSGT00940000157586.e	ENSGT00940000166065.a	ENSGT00940000160123.e.b.a.a.a
Haplochromini_A	ANCESTRAL SPECIES		ENSGT00530000064134.a.b	ENSGT00950000183119.a.a	ENSGT00940000156024.i.b	ENSGT00950000182945.b.a.a.a.a.a.a	ENSGT00940000166858	ENSGT00940000155644.a.b	ENSGT00940000154955.a	ENSGT00390000003368	ENSGT00940000165906	ENSGT00940000158152.a.a	ENSGT00940000164224.a	ENSGT00940000157504.c.b	ENSGT00390000007725.A.b.c	ENSGT00940000160210.d.b #20	ENSGT00940000158688.c.e #21	ENSGT00940000159534.f #22	ENSGT00550000074828.b	ENSGT01030000234555.a.a.b.a.b.b	ENSGT01030000234555.a.a.b.a.b.a.c.n	ENSGT00940000158771	ENSGT00950000182956.b.b.b.e.a	ENSGT00390000009166	ENSGT00940000156735.c	ENSGT00940000154709.a.b.a.a	ENSGT01030000234588.a.a.b	ENSGT00940000156777.c	ENSGT00940000156637.b	ENSGT00940000158040.d	ENSGT00940000157586.e	ENSGT00940000166065.a	ENSGT00940000160123.e.b.a.a.a
Haplochromini_B	ANCESTRAL SPECIES		ENSGT00940000165387.b	ENSGT00530000064134.a.b	ENSGT00950000183119.a.a	ENSGT00940000156024.i.b	ENSGT00950000182945.b.a.a.a.a.a.a	ENSGT00940000166858	ENSGT00940000155644.a.b	ENSGT00940000154955.a	ENSGT00390000003368	ENSGT00940000165906	ENSGT00940000158152.a.a	ENSGT00940000164224.a	ENSGT00940000157504.c.b	ENSGT00390000007725.A.b.c	ENSGT00940000160210.d.b #20	ENSGT00940000159534.f #22	ENSGT00550000074828.b	ENSGT01030000234555.a.a.b.a.b.b	ENSGT01030000234555.a.a.b.a.b.a.c.n	ENSGT00940000158771	ENSGT00950000182956.b.b.b.e.a	ENSGT00390000009166	ENSGT00940000156735.c	ENSGT00940000154709.a.b.a.a	ENSGT01030000234588.a.a.b	ENSGT00940000156777.c	ENSGT00940000156637.b	ENSGT00940000158040.d	ENSGT00940000157586.e	ENSGT00940000166065.a	ENSGT00940000160123.e.b.a.a.a
Eastern happy	MODERN SPECIES	17	ENSACLG00000021790	ncoa5 (ENSACLG00000021900)	capza1a (ENSACLG00000021911)	MOV10 (ENSACLG00000021961)	ENSACLG00000022023	ENSACLG00000022042	TAFA3 (ENSACLG00000022087)	slc16a1a (ENSACLG00000022127)	sycp1 (ENSACLG00000022159)	slc5a8l (ENSACLG00000022325)	tshba (ENSACLG00000022453)	slc25a55a (ENSACLG00000022495)	tspan2a (ENSACLG00000022516)	ngfb (ENSACLG00000022549)	KCNA3 (ENSACLG00000022558) #20	KCNA10 (ENSACLG00000022568) #22	rplp2 (ENSACLG00000022594)	ENSACLG00000022602	ADORA3 (ENSACLG00000022638)	ENSACLG00000022662	tead3b (ENSACLG00000022697)	smpd2a (ENSACLG00000022892)	PKP1 (ENSACLG00000022905)	ENSACLG00000022933	tnni1b (ENSACLG00000023120)	csrp1b (ENSACLG00000023130)	NAV1 (ENSACLG00000000040)	mybphb (ENSACLG00000000129)	SYT2 (ENSACLG00000000137)	ENSACLG00000000150	ENSACLG00000000179
Zebra mbuna	MODERN SPECIES	1108	ncoa5 (ENSMZEG00005003683)	capza1a (ENSMZEG00005003646)	MOV10 (ENSMZEG00005003622)	ENSMZEG00005003594	ENSMZEG00005003559	TAFA3 (ENSMZEG00005003551)	slc16a1a (ENSMZEG00005003536)	sycp1 (ENSMZEG00005003434)	slc5a8l (ENSMZEG00005003413)	tshba (ENSMZEG00005003348)	slc25a55a (ENSMZEG00005003310)	tspan2a (ENSMZEG00005003292)	ngfb (ENSMZEG00005003275)	ENSMZEG00005003246	KCNA3 (ENSMZEG00005003236) #20	KCNA10 (ENSMZEG00005003225) #22	rplp2 (ENSMZEG00005003204)	ENSMZEG00005003192	ADORA3 (ENSMZEG00005003103)	ENSMZEG00005003077	tead3b (ENSMZEG00005002990)	smpd2a (ENSMZEG00005002958)	PKP1 (ENSMZEG00005002931)	ENSMZEG00005002768	tnni1b (ENSMZEG00005002731)	csrp1b (ENSMZEG00005002716)	NAV1 (ENSMZEG00005002646)	mybphb (ENSMZEG00005002628)	SYT2 (ENSMZEG00005002615)	ENSMZEG00005002589	ENSMZEG00005002451
P. nyererei	MODERN SPECIES	329	ncoa5 (ENSPNYG00000006428)	capza1a (ENSPNYG00000006400)	MOV10 (ENSPNYG00000006377)	ENSPNYG00000006351	ENSPNYG00000006311	TAFA3 (ENSPNYG00000006283)	slc16a1a (ENSPNYG00000006181)	sycp1 (ENSPNYG00000006081)	slc5a8l (ENSPNYG00000005982)	tshba (ENSPNYG00000005929)	slc25a55a (ENSPNYG00000005887)	tspan2a (ENSPNYG00000005861)	ngfb (ENSPNYG00000005847)	KCNA3 (ENSPNYG00000005818) #20	KCNA2 (ENSPNYG00000005782) #21	KCNA10 (ENSPNYG00000005767) #22	rplp2 (ENSPNYG00000005747)	ENSPNYG00000005740	ENSPNYG00000005735	ADORA3 (ENSPNYG00000005712)	ENSPNYG00000005670	tead3b (ENSPNYG00000005612)	smpd2a (ENSPNYG00000005567)	PKP1 (ENSPNYG00000005548)	ENSPNYG00000005495	tnni1b (ENSPNYG00000005459)	csrp1b (ENSPNYG00000005431)	NAV1 (ENSPNYG00000005359)	mybphb (ENSPNYG00000005332)	SYT2 (ENSPNYG00000005311)	ENSPNYG00000005289
Burton s mouthbrooder	MODERN SPECIES	631	ENSHBUG00000010047	ncoa5 (ENSHBUG00000010079)	capza1a (ENSHBUG00000010115)	MOV10 (ENSHBUG00000010137)	ENSHBUG00000010167	ENSHBUG00000000262	TAFA3 (ENSHBUG00000010212)	slc16a1a (ENSHBUG00000010227)	sycp1 (ENSHBUG00000010253)	slc5a8l (ENSHBUG00000010290)	tshba (ENSHBUG00000010294)	slc25a55a (ENSHBUG00000010325)	tspan2a (ENSHBUG00000010361)	ngfb (ENSHBUG00000010373)	KCNA3 (ENSHBUG00000010386) #20	KCNA10 (ENSHBUG00000010392) #22
Lyretail cichlid	MODERN SPECIES	294	ncoa5 (ENSNBRG00000007389)	capza1a (ENSNBRG00000007431)	MOV10 (ENSNBRG00000007492)	ENSNBRG00000007550	ENSNBRG00000007582	TAFA3 (ENSNBRG00000007617)	slc16a1a (ENSNBRG00000007643)	ENSNBRG00000007803	slc5a8l (ENSNBRG00000007929)	tshba (ENSNBRG00000008075)	slc25a55a (ENSNBRG00000008140)	tspan2a (ENSNBRG00000008171)	ngfb (ENSNBRG00000008188)	KCNA3 (ENSNBRG00000008205) #20	KCNA2 (ENSNBRG00000008222) #21	KCNA10 (ENSNBRG00000008239) #22	rplp2 (ENSNBRG00000008259)	ENSNBRG00000008273	ENSNBRG00000008293	ENSNBRG00000008303	tead3b (ENSNBRG00000008369)	smpd2a (ENSNBRG00000008403)	ENSNBRG00000008424	ENSNBRG00000008446	tnni1b (ENSNBRG00000008476)	csrp1b (ENSNBRG00000008508)	NAV1 (ENSNBRG00000008543)	mybphb (ENSNBRG00000008627)	SYT2 (ENSNBRG00000008667)	ENSNBRG00000008745	ENSNBRG00000008779
Nile tilapia	MODERN SPECIES	17	ncoa5 (ENSONIG00000014652)	capza1a (ENSONIG00000014655)	MOV10 (ENSONIG00000014663)	ENSONIG00000032497	ENSONIG00000014672	TAFA3 (ENSONIG00000014675)	slc16a1a (ENSONIG00000014676)	sycp1 (ENSONIG00000014679)	slc5a8l (ENSONIG00000014680)	tshba (ENSONIG00000024421)	slc25a55a (ENSONIG00000014686)	tspan2a (ENSONIG00000014689)	ngfb (ENSONIG00000020978)	KCNA3 (ENSONIG00000020979) #20	KCNA2 (ENSONIG00000020980) #21	KCNA10 (ENSONIG00000037871) #22	rplp2 (ENSONIG00000014692)	ENSONIG00000033512	ENSONIG00000014695	ENSONIG00000014697	tead3b (ENSONIG00000014698)	smpd2a (ENSONIG00000014702)	ENSONIG00000014703	ENSONIG00000014705	tnni1b (ENSONIG00000014712)	csrp1b (ENSONIG00000014714)	NAV1 (ENSONIG00000014720)	mybphb (ENSONIG00000014722)	SYT2 (ENSONIG00000029530)	ENSONIG00000022671	ENSONIG00000031324
Midas cichlid	MODERN SPECIES	867	ncoa5 (ENSACIG00000008963)	capza1a (ENSACIG00000008982)	MOV10 (ENSACIG00000009019)	ENSACIG00000009140	ENSACIG00000009151	TAFA3 (ENSACIG00000009184)	slc16a1a (ENSACIG00000009203)	ENSACIG00000009329	slc5a8l (ENSACIG00000009338)	tshba (ENSACIG00000009449)	slc25a55a (ENSACIG00000009485)	tspan2a (ENSACIG00000009520)	ngfb (ENSACIG00000009543)	KCNA3 (ENSACIG00000009560) #20	KCNA2 (ENSACIG00000009587) #21	KCNA10 (ENSACIG00000009599) #22	rplp2 (ENSACIG00000009622)	ENSACIG00000009636	ENSACIG00000009643	ENSACIG00000009649	ENSACIG00000009656	tead3b (ENSACIG00000009716)	smpd2a (ENSACIG00000010069)	ENSACIG00000010117	ENSACIG00000010133	tnni1b (ENSACIG00000010207)	csrp1b (ENSACIG00000010225)	NAV1 (ENSACIG00000010245)	mybphb (ENSACIG00000010317)	SYT2 (ENSACIG00000010463)	ENSACIG00000010493
Pomacentridae	ANCESTRAL SPECIES	56	ENSGT00950000183119.a.a	ENSGT00940000156024.i.b	ENSGT00950000182945.b.a.a.a.a.a.a	ENSGT00940000166858	ENSGT00940000155644.a.b	ENSGT00940000154955.a	ENSGT00390000003368	ENSGT00970000193581	ENSGT00940000165906	ENSGT00940000158152.a.a	ENSGT00940000164224.a	ENSGT00940000157504.c.b	ENSGT00390000007725.A.b.c	ENSGT00940000160210.d.b #20	ENSGT00940000158688.c.e #21	ENSGT00940000159534.f #22	ENSGT00550000074828.b	ENSGT01030000234555.a.a.b.a.b.b	ENSGT01030000234555.a.a.b.a.b.a.c	ENSGT00940000158771	ENSGT00950000182956.b.b.b.e.a	ENSGT00390000009166	ENSGT00940000156735.c	ENSGT00940000154709.a.b.a.a	ENSGT01030000234588.a.a.b	ENSGT00940000156777.c	ENSGT00940000156637.b	ENSGT00940000158040.d	ENSGT00940000157586.e	ENSGT00940000166065.a	ENSGT00940000178767
Pomacentridae_A	ANCESTRAL SPECIES	123	ENSGT00950000183119.a.a	ENSGT00940000156024.i.b	ENSGT00950000182945.b.a.a.a.a.a.a	ENSGT00940000166858	ENSGT00940000155644.a.b	ENSGT00940000154955.a	ENSGT00390000003368	ENSGT00970000193581	ENSGT00940000165906.e	ENSGT00940000158152.a.a	ENSGT00940000164224.a	ENSGT00940000157504.c.b	ENSGT00390000007725.A.b.c	ENSGT00940000160210.d.b #20	ENSGT00940000158688.c.e #21	ENSGT00940000159534.f #22	ENSGT00550000074828.b	ENSGT01030000234555.a.a.b.a.b.b	ENSGT01030000234555.a.a.b.a.b.a.c.j	ENSGT00940000158771	ENSGT00950000182956.b.b.b.e.a	ENSGT00390000009166	ENSGT00940000156735.c	ENSGT00940000154709.a.b.a.a	ENSGT01030000234588.a.a.b	ENSGT00940000156777.c	ENSGT00940000157238.a	ENSGT00940000157444	ENSGT00940000159941	ENSGT00390000011897	ENSGT00390000010053
Amphiprion	ANCESTRAL SPECIES	80	ENSGT00950000183119.a.a	ENSGT00940000156024.i.b	ENSGT00950000182945.b.a.a.a.a.a.a	ENSGT00940000166858	ENSGT00940000155644.a.b	ENSGT00940000154955.a	ENSGT00390000003368	ENSGT00970000193581	ENSGT00940000165906.e	ENSGT00940000158152.a.a	ENSGT00940000164224.a	ENSGT00940000157504.c.b	ENSGT00390000007725.A.b.c	ENSGT00940000160210.d.b #20	ENSGT00940000158688.c.e #21	ENSGT00940000159534.f #22	ENSGT00550000074828.b	ENSGT01030000234555.a.a.b.a.b.b	ENSGT01030000234555.a.a.b.a.b.a.c.j	ENSGT00940000158771	ENSGT00950000182956.b.b.b.e.a	ENSGT00390000009166	ENSGT00940000156735.c	ENSGT00940000154709.a.b.a.a	ENSGT01030000234588.a.a.b	ENSGT00940000156777.c	ENSGT00940000157238.a	ENSGT00940000157444	ENSGT00940000159941	ENSGT00390000011897	ENSGT00390000010053
Orange clownfish	MODERN SPECIES	20	MOV10 (ENSAPEG00000002196)	ENSAPEG00000002164	ENSAPEG00000002154	TAFA3 (ENSAPEG00000002145)	slc16a1a (ENSAPEG00000002061)	sycp1 (ENSAPEG00000001901)	ENSAPEG00000001882	slc5a8l (ENSAPEG00000001831)	tshba (ENSAPEG00000001820)	slc25a55a (ENSAPEG00000001778)	tspan2a (ENSAPEG00000001748)	ngfb (ENSAPEG00000001729)	ENSAPEG00000001723	KCNA3 (ENSAPEG00000001678) #20	KCNA2 (ENSAPEG00000000340) #21	KCNA10 (ENSAPEG00000023909) #22	rplp2 (ENSAPEG00000023899)	ENSAPEG00000023884	ENSAPEG00000023846	ENSAPEG00000023840	tead3b (ENSAPEG00000023789)	smpd2a (ENSAPEG00000023764)	ENSAPEG00000023752	tnni1b (ENSAPEG00000023739)	csrp1b (ENSAPEG00000023731)	ogna (ENSAPEG00000023714)	aspn (ENSAPEG00000023706)	ECM2 (ENSAPEG00000023682)	ENSAPEG00000023654	ippk (ENSAPEG00000023634)	ENSAPEG00000023611
Clown anemonefish	MODERN SPECIES	2488												KANSL1 (ENSAOCG00000012581)	CRHR1 (ENSAOCG00000012618)	KCNA3 (ENSAOCG00000000779) #20	KCNA2 (ENSAOCG00000012650) #21	KCNA10 (ENSAOCG00000012668) #22
Spiny chromis	MODERN SPECIES	415						slc16a1a (ENSAPOG00000016638)	sycp1 (ENSAPOG00000016616)	ENSAPOG00000016468	slc5a8l (ENSAPOG00000016430)	slc5a8l (ENSAPOG00000016318)	tshba (ENSAPOG00000016169)	slc25a55a (ENSAPOG00000016158)	tspan2a (ENSAPOG00000016115)	ngfb (ENSAPOG00000016109)	KCNA3 (ENSAPOG00000016088) #20	KCNA10 (ENSAPOG00000000885) #22	rplp2 (ENSAPOG00000016049)	ENSAPOG00000016025	ADORA3 (ENSAPOG00000016019)	ENSAPOG00000016015	tead3b (ENSAPOG00000000743)	ENSAPOG00000000440	ENSAPOG00000015878	ENSAPOG00000015866	csrp1b (ENSAPOG00000015858)	cenpp (ENSAPOG00000015835)	ogna (ENSAPOG00000015818)	aspn (ENSAPOG00000015719)	ECM2 (ENSAPOG00000015711)	ENSAPOG00000015703
Bicolor damselfish	MODERN SPECIES	241	ncoa5 (ENSSPAG00000002497)	capza1a (ENSSPAG00000002448)	MOV10 (ENSSPAG00000002414)	ENSSPAG00000002400	ENSSPAG00000002392	TAFA3 (ENSSPAG00000002383)	slc16a1a (ENSSPAG00000002372)	sycp1 (ENSSPAG00000002298)	slc5a8l (ENSSPAG00000002151)	tshba (ENSSPAG00000002131)	slc25a55a (ENSSPAG00000002090)	tspan2a (ENSSPAG00000002082)	ngfb (ENSSPAG00000002078)	KCNA3 (ENSSPAG00000002061) #20	KCNA2 (ENSSPAG00000002046) #21	KCNA10 (ENSSPAG00000002032) #22	rplp2 (ENSSPAG00000002018)	ENSSPAG00000002001	ADORA3 (ENSSPAG00000001996)	ENSSPAG00000001974	tead3b (ENSSPAG00000001869)	smpd2a (ENSSPAG00000001844)	ENSSPAG00000001837	ENSSPAG00000001813	tnni1b (ENSSPAG00000001794)	csrp1b (ENSSPAG00000001776)	NAV1 (ENSSPAG00000001711)	mybphb (ENSSPAG00000001684)	SYT2 (ENSSPAG00000001643)	ENSSPAG00000001630	ENSSPAG00000001532
Percomorphaceae_C	ANCESTRAL SPECIES	1	ENSGT00950000183119.a.a	ENSGT00940000156024.i.b	ENSGT00950000182945.b.a.a.a.a.a.a	ENSGT00940000166858	ENSGT00940000155644.a.b	ENSGT00940000154955.a	ENSGT00390000003368	ENSGT00970000193581	ENSGT00940000165906	ENSGT00940000158152.a.a	ENSGT00940000164224.a	ENSGT00940000157504.c.b	ENSGT00390000007725.A.b.c	ENSGT00940000160210.d.b #20	ENSGT00940000158688.c.e #21	ENSGT00940000159534.f #22	ENSGT00550000074828.b	ENSGT01030000234555.a.a.b.a.b.b	ENSGT01030000234555.a.a.b.a.b.a.c.p	ENSGT00940000158771	ENSGT00950000182956.b.b.b.e.a	ENSGT00390000009166	ENSGT00940000156735.c	ENSGT00940000154709.a.b.a.a	ENSGT01030000234588.a.a.b	ENSGT00940000156777.c	ENSGT01010000223242	ENSGT00940000156637.b	ENSGT00940000158040.d	ENSGT00940000157586.e	ENSGT00940000166065.a
Percomorphaceae_D	ANCESTRAL SPECIES	3	ENSGT00950000183119.a.a	ENSGT00940000156024.i.b	ENSGT00950000182945.b.a.a.a.a.a.a	ENSGT00940000166858	ENSGT00940000155644.a.b	ENSGT00940000154955.a	ENSGT00390000003368	ENSGT00970000193581	ENSGT00940000165906	ENSGT00940000158152.a.a	ENSGT00940000164224.a	ENSGT00940000157504.c.b	ENSGT00390000007725.A.b.c	ENSGT00940000160210.d.b #20	ENSGT00940000158688.c.e #21	ENSGT00940000159534.f #22	ENSGT00550000074828.b	ENSGT01030000234555.a.a.b.a.b.b	ENSGT01030000234555.a.a.b.a.b.a.c.o.a	ENSGT00940000158771	ENSGT00950000182956.b.b.b.e.a	ENSGT00390000009166	ENSGT00940000156735.c	ENSGT00940000154709.a.b.a.a	ENSGT01030000234588.a.a.b	ENSGT00940000156777.c	ENSGT01010000223242	ENSGT00940000156637.b	ENSGT00940000158040.d	ENSGT00940000157586.e	ENSGT00940000166065.a
Anabantaria	ANCESTRAL SPECIES		ENSGT00950000183119.a.a	ENSGT00940000156024.i.b	ENSGT00950000182945.b.a.a.a.a.a.a	ENSGT00940000166858	ENSGT00940000155644.a.b	ENSGT00940000154955.a	ENSGT00390000003368	ENSGT00970000193581	ENSGT00940000165906	ENSGT00940000158152.a.a	ENSGT00940000164224.a	ENSGT00940000157504.c.b	ENSGT00390000007725.A.b.c	ENSGT00940000160210.d.b #20	ENSGT00940000158688.c.e #21	ENSGT00940000159534.f #22	ENSGT00550000074828.b	ENSGT01030000234555.a.a.b.a.b.b	ENSGT01030000234555.a.a.b.a.b.a.c.p	ENSGT00940000158771	ENSGT00950000182956.b.b.b.e.a	ENSGT00390000009166	ENSGT00940000156735.c	ENSGT00940000154709.a.b.a.a	ENSGT01030000234588.a.a.b	ENSGT00940000156777.c	ENSGT00940000156637.b	ENSGT00940000158040.d	ENSGT00940000157586.e	ENSGT00940000166065.a	ENSGT00940000160123.e.b.a.a.a
Zig-zag eel	MODERN SPECIES	19	ncoa5 (ENSMAMG00000005538)	ENSMAMG00000005528	MOV10 (ENSMAMG00000005510)	ENSMAMG00000005487	ENSMAMG00000005435	TAFA3 (ENSMAMG00000005396)	slc16a1a (ENSMAMG00000005296)	sycp1 (ENSMAMG00000005220)	ENSMAMG00000005204	slc5a8l (ENSMAMG00000005189)	tshba (ENSMAMG00000005143)	slc25a55a (ENSMAMG00000005110)	tspan2a (ENSMAMG00000005086)	ngfb (ENSMAMG00000005074)	ENSMAMG00000005030 #20	ENSMAMG00000004976 #22	rplp2 (ENSMAMG00000004953)	ENSMAMG00000025618	ENSMAMG00000026371	ENSMAMG00000004910	tead3b (ENSMAMG00000004744)	ENSMAMG00000004710	ENSMAMG00000004698	ENSMAMG00000004593	tnni1b (ENSMAMG00000004575)	csrp1b (ENSMAMG00000004531)	ENSMAMG00000004474	mybphb (ENSMAMG00000004460)	ENSMAMG00000004441	ENSMAMG00000004418	ENSMAMG00000004257
Anabantoidei	ANCESTRAL SPECIES	1	ENSGT00950000183119.a.a	ENSGT00940000156024.i.b	ENSGT00950000182945.b.a.a.a.a.a.a	ENSGT00940000166858	ENSGT00940000155644.a.b	ENSGT00940000154955.a	ENSGT00390000003368	ENSGT00970000193581	ENSGT00940000165906	ENSGT00940000158152.a.a	ENSGT00940000164224.a	ENSGT00940000157504.c.b	ENSGT00390000007725.A.b.c	ENSGT00940000160210.d.b #20	ENSGT00940000158688.c.e #21	ENSGT00940000159534.f #22	ENSGT00550000074828.b	ENSGT01030000234555.a.a.b.a.b.b	ENSGT01030000234555.a.a.b.a.b.a.c.p	ENSGT00940000158771	ENSGT00950000182956.b.b.b.e.a	ENSGT00390000009166	ENSGT00940000156735.c	ENSGT00940000154709.a.b.a.a	ENSGT01030000234588.a.a.b	ENSGT00940000156777.c	ENSGT00940000156637.b	ENSGT00940000158040.d	ENSGT00940000157586.e	ENSGT00940000166065.a	ENSGT00940000160123.e.b.a.a.a
Siamese fighting fish	MODERN SPECIES	16	ENSBSLG00000013437	MOV10 (ENSBSLG00000013520)	ENSBSLG00000014042	ENSBSLG00000014095	TAFA3 (ENSBSLG00000014231)	slc16a1a (ENSBSLG00000014242)	sycp1 (ENSBSLG00000014253)	ENSBSLG00000014318	slc5a8l (ENSBSLG00000014336)	tshba (ENSBSLG00000014404)	slc25a55a (ENSBSLG00000014415)	tspan2a (ENSBSLG00000014465)	ngfb (ENSBSLG00000014485)	KCNA3 (ENSBSLG00000014490) #20	KCNA2 (ENSBSLG00000014491) #21	KCNA10 (ENSBSLG00000014497) #22	rplp2 (ENSBSLG00000014503)	ENSBSLG00000014508	ADORA3 (ENSBSLG00000014516)	ENSBSLG00000014524	tead3b (ENSBSLG00000014537)	smpd2a (ENSBSLG00000014593)	PKP1 (ENSBSLG00000014611)	ENSBSLG00000014614	tnni1b (ENSBSLG00000014621)	csrp1b (ENSBSLG00000014634)	NAV1 (ENSBSLG00000014725)	mybphb (ENSBSLG00000015262)	SYT2 (ENSBSLG00000015394)	ENSBSLG00000015409	ENSBSLG00000015446
Climbing perch	MODERN SPECIES	18	ncoa5 (ENSATEG00000025092)	ENSATEG00000025093	MOV10 (ENSATEG00000025094)	ENSATEG00000025226	ENSATEG00000025096	TAFA3 (ENSATEG00000025097)	slc16a1a (ENSATEG00000025098)	sycp1 (ENSATEG00000028273)	ENSATEG00000025099	slc5a8l (ENSATEG00000025100)	tshba (ENSATEG00000025743)	slc25a55a (ENSATEG00000025102)	tspan2a (ENSATEG00000025103)	ngfb (ENSATEG00000025104)	ENSATEG00000025105 #20	ENSATEG00000025107 #22	rplp2 (ENSATEG00000025108)	ENSATEG00000025109	ENSATEG00000025110	ENSATEG00000025111	tead3b (ENSATEG00000025112)	ENSATEG00000025113	ENSATEG00000025114	ENSATEG00000025115	tnni1b (ENSATEG00000025116)	csrp1b (ENSATEG00000025117)	ENSATEG00000025118	mybphb (ENSATEG00000025119)	ENSATEG00000025120	ENSATEG00000025121	ENSATEG00000025122
Carangaria	ANCESTRAL SPECIES	3	ENSGT00950000183119.a.a	ENSGT00940000156024.i.b	ENSGT00950000182945.b.a.a.a.a.a.a	ENSGT00940000166858	ENSGT00940000155644.a.b	ENSGT00940000154955.a	ENSGT00390000003368	ENSGT00970000193581	ENSGT00940000165906	ENSGT00940000158152.a.a	ENSGT00940000164224.a	ENSGT00940000157504.c.b	ENSGT00390000007725.A.b.c	ENSGT00940000160210.d.b #20	ENSGT00940000158688.c.e #21	ENSGT00940000159534.f #22	ENSGT00550000074828.b	ENSGT01030000234555.a.a.b.a.b.b	ENSGT01030000234555.a.a.b.a.b.a.c.o.b	ENSGT01030000234555.a.a.b.a.b.a.c.o.a	ENSGT00940000158771	ENSGT00950000182956.b.b.b.e.a	ENSGT00390000009166	ENSGT00940000156735.c	ENSGT00940000154709.a.b.a.a	ENSGT01030000234588.a.a.b	ENSGT00940000156777.c	ENSGT01010000223242	ENSGT00940000156637.b	ENSGT00940000158040.d	ENSGT00940000157586.e
Carangaria_A	ANCESTRAL SPECIES	57	ENSGT00950000183119.a.a	ENSGT00940000156024.i.b	ENSGT00950000182945.b.a.a.a.a.a.a	ENSGT00940000166858	ENSGT00940000155644.a.b	ENSGT00940000154955.a	ENSGT00390000003368	ENSGT00970000193581	ENSGT00940000165906	ENSGT00940000158152.a.a	ENSGT00940000164224.a	ENSGT00940000157504.c.b	ENSGT00390000007725.A.b.c	ENSGT00940000160210.d.b #20	ENSGT00940000158688.c.e #21	ENSGT00940000159534.f #22	ENSGT00550000074828.b	ENSGT01030000234555.a.a.b.a.b.b	ENSGT01030000234555.a.a.b.a.b.a.c.o.b	ENSGT00940000158771	ENSGT00950000182956.b.b.b.e.a	ENSGT00390000009166	ENSGT00940000156735.c	ENSGT00940000154709.a.b.a.a	ENSGT01030000234588.a.a.b	ENSGT00940000156777.c	ENSGT01010000223242	ENSGT00940000156637.b	ENSGT00940000158040.d	ENSGT00940000157586.e	ENSGT00940000166065.a
Seriola	ANCESTRAL SPECIES	106	ENSGT00530000064134.a.b	ENSGT00950000183119.a.a	ENSGT00940000156024.i.b	ENSGT00950000182945.b.a.a.a.a.a.a	ENSGT00940000166858	ENSGT00940000155644.a.b	ENSGT00940000154955.a	ENSGT00390000003368	ENSGT00940000165906	ENSGT00940000158152.a.a	ENSGT00940000164224.a	ENSGT00940000157504.c.b	ENSGT00390000007725.A.b.c	ENSGT00940000160210.d.b #20	ENSGT00940000158688.c.e #21	ENSGT00940000159534.f #22	ENSGT00550000074828.b	ENSGT01030000234555.a.a.b.a.b.b	ENSGT01030000234555.a.a.b.a.b.a.c.o.b	ENSGT00940000158771	ENSGT00950000182956.b.b.b.e.a	ENSGT00390000009166	ENSGT00940000154709.a.b.a.a	ENSGT00940000156735.c	ENSGT01030000234588.a.a.b	ENSGT00940000156777.c	ENSGT01010000223242	ENSGT00940000156637.b	ENSGT00940000158040.d	ENSGT00940000157586.e	ENSGT00940000166065.a
Greater amberjack	MODERN SPECIES	25	MOV10 (ENSSDUG00000021496)	ENSSDUG00000021514	ENSSDUG00000021523	TAFA3 (ENSSDUG00000021531)	slc16a1a (ENSSDUG00000021544)	sycp1 (ENSSDUG00000021552)	sycp1 (ENSSDUG00000021585)	ENSSDUG00000021616	sycp1 (ENSSDUG00000021624)	slc5a8l (ENSSDUG00000021639)	tshba (ENSSDUG00000021649)	slc25a55a (ENSSDUG00000021668)	tspan2a (ENSSDUG00000021674)	ngfb (ENSSDUG00000021688)	KCNA3 (ENSSDUG00000021692) #20	KCNA10 (ENSSDUG00000021695) #22	rplp2 (ENSSDUG00000021700)	ENSSDUG00000021703	ADORA3 (ENSSDUG00000021706)	ENSSDUG00000021715	tead3b (ENSSDUG00000021724)	smpd2a (ENSSDUG00000000098)	ENSSDUG00000000182	ENSSDUG00000000472	NAV1 (ENSSDUG00000000535)	tnni1b (ENSSDUG00000000673)	csrp1b (ENSSDUG00000000774)	ENSSDUG00000000802	mybphb (ENSSDUG00000000825)	SYT2 (ENSSDUG00000000839)	ENSSDUG00000000888
Yellowtail amberjack	MODERN SPECIES	2953	ncoa5 (ENSSLDG00000008644)	capza1a (ENSSLDG00000008674)	MOV10 (ENSSLDG00000008758)	ENSSLDG00000008797	ENSSLDG00000008811	TAFA3 (ENSSLDG00000008838)	slc16a1a (ENSSLDG00000008865)	ENSSLDG00000008911	slc5a8l (ENSSLDG00000009027)	tshba (ENSSLDG00000009097)	slc25a55a (ENSSLDG00000009107)	tspan2a (ENSSLDG00000009148)	ngfb (ENSSLDG00000009167)	KCNA3 (ENSSLDG00000009181) #20	KCNA2 (ENSSLDG00000009214) #21	KCNA10 (ENSSLDG00000009230) #22	rplp2 (ENSSLDG00000009252)	ENSSLDG00000009265	ENSSLDG00000009277	tead3b (ENSSLDG00000009368)	smpd2a (ENSSLDG00000009497)	ENSSLDG00000009568	ENSSLDG00000009659	tnni1b (ENSSLDG00000009682)	csrp1b (ENSSLDG00000009719)	ENSSLDG00000009753	NAV1 (ENSSLDG00000009784)	mybphb (ENSSLDG00000009887)	SYT2 (ENSSLDG00000010054)	ENSSLDG00000010091	ENSSLDG00000010106
Barramundi perch	MODERN SPECIES	299						slc16a1a (ENSLCAG00010005329)	sycp1 (ENSLCAG00010005337)	ENSLCAG00010005342	slc5a8l (ENSLCAG00010005353)	tshba (ENSLCAG00010005364)	slc25a55a (ENSLCAG00010005368)	tspan2a (ENSLCAG00010005372)	ngfb (ENSLCAG00010005378)	KCNA3 (ENSLCAG00010005381) #20	KCNA2 (ENSLCAG00010005382) #21	KCNA10 (ENSLCAG00010005387) #22	rplp2 (ENSLCAG00010005389)	ENSLCAG00010005395	ADORA3 (ENSLCAG00010005397)	ENSLCAG00010005404	tead3b (ENSLCAG00010005415)	smpd2a (ENSLCAG00010005450)	ENSLCAG00010005460	ENSLCAG00010005464	NAV1 (ENSLCAG00010005486)	tnni1b (ENSLCAG00010005568)	csrp1b (ENSLCAG00010005572)	ENSLCAG00010005577	mybphb (ENSLCAG00010005580)	SYT2 (ENSLCAG00010005583)	ENSLCAG00010005584
Pleuronectoidei	ANCESTRAL SPECIES	55			ENSGT00940000156024.i.b	ENSGT00950000182945.b.a.a.a.a.a.a	ENSGT00940000166858	ENSGT00940000155644.a.b	ENSGT00940000154955.a	ENSGT00390000003368	ENSGT00940000165906	ENSGT00940000158152.a.a	ENSGT00940000164224.a	ENSGT00940000157504.c.b	ENSGT00390000007725.A.b.c	ENSGT00940000160210.d.b #20	ENSGT00940000158688.c.e #21	ENSGT00940000159534.f #22	ENSGT00550000074828.b	ENSGT01030000234555.a.a.b.a.b.b	ENSGT01030000234555.a.a.b.a.b.a.c.o.a	ENSGT00940000158771	ENSGT00950000182956.b.b.b.e.a	ENSGT00390000009166	ENSGT00940000156735.c	ENSGT00940000154709.a.b.a.a	ENSGT01030000234588.a.a.b	ENSGT00940000156777.c	ENSGT00940000156637.b	ENSGT00940000158040.d	ENSGT00940000157586.e	ENSGT00940000166065.a	ENSGT00940000160123.e.b.a.a.a
Tongue sole	MODERN SPECIES	2	capza1a (ENSCSEG00000015362)	ENSCSEG00000015375	ENSCSEG00000015381	TAFA3 (ENSCSEG00000015393)	slc16a1a (ENSCSEG00000015395)	sycp1 (ENSCSEG00000015408)	slc5a8l (ENSCSEG00000015439)	ENSCSEG00000015455	ENSCSEG00000015458	slc25a55a (ENSCSEG00000015468)	tspan2a (ENSCSEG00000015485)	ENSCSEG00000015492	ngfb (ENSCSEG00000015499)	KCNA3 (ENSCSEG00000015506) #20	KCNA2 (ENSCSEG00000015513) #21	KCNA10 (ENSCSEG00000015517) #22	rplp2 (ENSCSEG00000015968)	ENSCSEG00000015974	ENSCSEG00000015977	tead3b (ENSCSEG00000015987)	smpd2a (ENSCSEG00000016030)	PKP1 (ENSCSEG00000016044)	ENSCSEG00000016050	tnni1b (ENSCSEG00000016059)	KLHL10 (ENSCSEG00000016064)	KLHL10 (ENSCSEG00000016070)	csrp1b (ENSCSEG00000016075)	NAV1 (ENSCSEG00000016086)	mybphb (ENSCSEG00000016121)	SYT2 (ENSCSEG00000016136)	ENSCSEG00000016143
Turbot	MODERN SPECIES	18	ENSSMAG00000010105	ENSSMAG00000036123	ENSSMAG00000010082	ENSSMAG00000010040	MOV10 (ENSSMAG00000010012)	ENSSMAG00000009997	ENSSMAG00000009969	TAFA3 (ENSSMAG00000009933)	slc16a1a (ENSSMAG00000009425)	sycp1 (ENSSMAG00000009380)	slc5a8l (ENSSMAG00000009288)	tshba (ENSSMAG00000036345)	slc25a55a (ENSSMAG00000009250)	tspan2a (ENSSMAG00000009241)	ngfb (ENSSMAG00000009233)	ENSSMAG00000009205 #22	rplp2 (ENSSMAG00000022743)	ENSSMAG00000034864	ENSSMAG00000009183	ENSSMAG00000009166	tead3b (ENSSMAG00000008989)	ENSSMAG00000008963	ENSSMAG00000008926	tnni1b (ENSSMAG00000008824)	csrp1b (ENSSMAG00000008808)	ENSSMAG00000032805	ENSSMAG00000008943	mybphb (ENSSMAG00000008659)	ENSSMAG00000008642	ENSSMAG00000008636	ENSSMAG00000008517
Eupercaria	ANCESTRAL SPECIES		ENSGT00950000183119.a.a	ENSGT00940000156024.i.b	ENSGT00950000182945.b.a.a.a.a.a.a	ENSGT00940000166858	ENSGT00940000155644.a.b	ENSGT00940000154955.a	ENSGT00390000003368	ENSGT00970000193581	ENSGT00940000165906	ENSGT00940000158152.a.a	ENSGT00940000164224.a	ENSGT00940000157504.c.b	ENSGT00390000007725.A.b.c	ENSGT00940000160210.d.b #20	ENSGT00940000158688.c.e #21	ENSGT00940000159534.f #22	ENSGT00550000074828.b	ENSGT01030000234555.a.a.b.a.b.b	ENSGT01030000234555.a.a.b.a.b.a.c.o.b	ENSGT00940000158771	ENSGT00950000182956.b.b.b.e.a	ENSGT00390000009166	ENSGT00940000156735.c	ENSGT00940000154709.a.b.a.a	ENSGT01030000234588.a.a.b	ENSGT00940000156777.c	ENSGT01010000223242	ENSGT00940000156637.b	ENSGT00940000158040.d	ENSGT00940000157586.e	ENSGT00940000166065.a
Eupecaria_A	ANCESTRAL SPECIES		ENSGT00950000183119.a.a	ENSGT00940000156024.i.b	ENSGT00950000182945.b.a.a.a.a.a.a	ENSGT00940000166858	ENSGT00940000155644.a.b	ENSGT00940000154955.a	ENSGT00390000003368	ENSGT00970000193581	ENSGT00940000165906	ENSGT00940000158152.a.a	ENSGT00940000164224.a	ENSGT00940000157504.c.b	ENSGT00390000007725.A.b.c	ENSGT00940000160210.d.b #20	ENSGT00940000158688.c.e #21	ENSGT00940000159534.f #22	ENSGT00550000074828.b	ENSGT01030000234555.a.a.b.a.b.b	ENSGT01030000234555.a.a.b.a.b.a.c.o.b	ENSGT00940000158771	ENSGT00950000182956.b.b.b.e.a	ENSGT00390000009166	ENSGT00940000156735.c	ENSGT00940000154709.a.b.a.a	ENSGT01030000234588.a.a.b	ENSGT00940000156777.c	ENSGT01010000223242	ENSGT00940000156637.b	ENSGT00940000158040.d	ENSGT00940000157586.e	ENSGT00940000166065.a
Ballan wrasse	MODERN SPECIES	34	trib3 (ENSLBEG00000025406)	ENSLBEG00000025361	ENSLBEG00000025332	ENSLBEG00000025322	ENSLBEG00000025308	ENSLBEG00000025296	ENSLBEG00000025285	ENSLBEG00000025278	ENSLBEG00000025264	slc5a8l (ENSLBEG00000025179)	tshba (ENSLBEG00000025145)	slc25a55a (ENSLBEG00000025114)	tspan2a (ENSLBEG00000025094)	ngfb (ENSLBEG00000025079)	KCNA3 (ENSLBEG00000025065) #20	KCNA10 (ENSLBEG00000025052) #22	rplp2 (ENSLBEG00000025032)	ENSLBEG00000025024	ENSLBEG00000025011	ENSLBEG00000024995	tead3b (ENSLBEG00000024973)	smpd2a (ENSLBEG00000024878)	ENSLBEG00000024852	ENSLBEG00000024791	tnni1b (ENSLBEG00000024764)	csrp1b (ENSLBEG00000024634)	NAV1 (ENSLBEG00000024475)	mybphb (ENSLBEG00000024428)	SYT2 (ENSLBEG00000024399)	ENSLBEG00000024372	ENSLBEG00000024358
Eupecaria_B	ANCESTRAL SPECIES	2	ENSGT00950000183119.a.a	ENSGT00940000156024.i.b	ENSGT00950000182945.b.a.a.a.a.a.a	ENSGT00940000166858	ENSGT00940000155644.a.b	ENSGT00940000154955.a	ENSGT00390000003368	ENSGT00970000193581	ENSGT00940000165906	ENSGT00940000158152.a.a	ENSGT00940000164224.a	ENSGT00940000157504.c.b	ENSGT00390000007725.A.b.c	ENSGT00940000160210.d.b #20	ENSGT00940000158688.c.e #21	ENSGT00940000159534.f #22	ENSGT00550000074828.b	ENSGT01030000234555.a.a.b.a.b.b	ENSGT01030000234555.a.a.b.a.b.a.c.o.b	ENSGT00940000158771	ENSGT00950000182956.b.b.b.e.a	ENSGT00390000009166	ENSGT00940000156735.c	ENSGT00940000154709.a.b.a.a	ENSGT01030000234588.a.a.b	ENSGT00940000156777.c	ENSGT01010000223242	ENSGT00940000156637.b	ENSGT00940000158040.d	ENSGT00940000157586.e	ENSGT00940000166065.a
Perciformes	ANCESTRAL SPECIES		ENSGT00950000183119.a.a	ENSGT00940000156024.i.b	ENSGT00950000182945.b.a.a.a.a.a.a	ENSGT00940000166858	ENSGT00940000155644.a.b	ENSGT00940000154955.a	ENSGT00390000003368	ENSGT00970000193581	ENSGT00940000165906	ENSGT00940000158152.a.a	ENSGT00940000164224.a	ENSGT00940000157504.c.b	ENSGT00390000007725.A.b.c	ENSGT00940000160210.d.b #20	ENSGT00940000158688.c.e #21	ENSGT00940000159534.f #22	ENSGT00550000074828.b	ENSGT01030000234555.a.a.b.a.b.b	ENSGT01030000234555.a.a.b.a.b.a.c.o.b	ENSGT00940000158771	ENSGT00950000182956.b.b.b.e.a	ENSGT00390000009166	ENSGT00940000156735.c	ENSGT00940000154709.a.b.a.a	ENSGT01030000234588.a.a.b	ENSGT00940000156777.c	ENSGT01010000223242	ENSGT00940000156637.b	ENSGT00940000158040.d	ENSGT00940000157586.e	ENSGT00940000166065.a
Cottioidei	ANCESTRAL SPECIES		ENSGT00950000183119.a.a	ENSGT00940000156024.i.b	ENSGT00950000182945.b.a.a.a.a.a.a	ENSGT00940000166858	ENSGT00940000155644.a.b	ENSGT00940000154955.a	ENSGT00390000003368	ENSGT00970000193581	ENSGT00940000165906	ENSGT00940000158152.a.a	ENSGT00940000164224.a	ENSGT00940000157504.c.b	ENSGT00390000007725.A.b.c	ENSGT00940000160210.d.b #20	ENSGT00940000158688.c.e #21	ENSGT00940000159534.f #22	ENSGT00550000074828.b	ENSGT01030000234555.a.a.b.a.b.b	ENSGT01030000234555.a.a.b.a.b.a.c.p	ENSGT00940000158771	ENSGT00950000182956.b.b.b.e.a	ENSGT00390000009166	ENSGT00940000156735.c	ENSGT00940000154709.a.b.a.a	ENSGT01030000234588.a.a.b	ENSGT00940000156777.c	ENSGT00940000156637.b	ENSGT00940000158040.d	ENSGT00940000157586.e	ENSGT00940000166065.a	ENSGT00390000013981.b
Lumpfish	MODERN SPECIES	20	ADORA3 (ENSCLMG00005016708)	ENSCLMG00005016709	ncoa5 (ENSCLMG00005016710)	capza1a (ENSCLMG00005016718)	ENSCLMG00005016835	ENSCLMG00005016901	TAFA3 (ENSCLMG00005016904)	sycp1 (ENSCLMG00005016908)	ENSCLMG00005016918	slc5a8l (ENSCLMG00005016926)	tshba (ENSCLMG00005016995)	slc25a55a (ENSCLMG00005017000)	tspan2a (ENSCLMG00005017059)	ngfb (ENSCLMG00005017061)	KCNA2 (ENSCLMG00005017063) #21	KCNA10 (ENSCLMG00005017064) #22	rplp2 (ENSCLMG00005017066)	ENSCLMG00005017068	ADORA3 (ENSCLMG00005017069)	ENSCLMG00005017071	tead3b (ENSCLMG00005017074)	smpd2a (ENSCLMG00005017078)	ENSCLMG00005017079	ENSCLMG00005017083	tnni1b (ENSCLMG00005017092)	csrp1b (ENSCLMG00005017095)	ENSCLMG00005017104	mybphb (ENSCLMG00005017109)	SYT2 (ENSCLMG00005017115)	ENSCLMG00005017117	zgc:66479 (ENSCLMG00005017119)
Stickleback	MODERN SPECIES	17	capza1a (ENSGACG00000005459)	MOV10 (ENSGACG00000005448)	ENSGACG00000005413	ENSGACG00000005376	TAFA3 (ENSGACG00000005373)	slc16a1a (ENSGACG00000005350)	sycp1 (ENSGACG00000005335)	ENSGACG00000005334	slc5a8l (ENSGACG00000005284)	tshba (ENSGACG00000005276)	slc25a55a (ENSGACG00000005247)	tspan2a (ENSGACG00000005236)	ngfb (ENSGACG00000005234)	KCNA3 (ENSGACG00000005230) #20	KCNA2 (ENSGACG00000005222) #21	KCNA10 (ENSGACG00000005218) #22	rplp2 (ENSGACG00000005189)	ENSGACG00000005174	ADORA3 (ENSGACG00000005160)	ENSGACG00000005153	tead3b (ENSGACG00000005144)	smpd2a (ENSGACG00000005132)	PKP1 (ENSGACG00000005123)	ENSGACG00000005105	tnni1b (ENSGACG00000005095)	csrp1b (ENSGACG00000005056)	NAV1 (ENSGACG00000005034)	mybphb (ENSGACG00000005023)	SYT2 (ENSGACG00000005015)	ENSGACG00000005005	ENSGACG00000005003
Perciformes_a	ANCESTRAL SPECIES	5	ENSGT00950000183119.a.a	ENSGT00940000156024.i.b	ENSGT00950000182945.b.a.a.a.a.a.a	ENSGT00940000166858	ENSGT00940000155644.a.b	ENSGT00940000154955.a	ENSGT00390000003368	ENSGT00970000193581	ENSGT00940000165906	ENSGT00940000158152.a.a	ENSGT00940000164224.a	ENSGT00940000157504.c.b	ENSGT00390000007725.A.b.c	ENSGT00940000160210.d.b #20	ENSGT00940000158688.c.e #21	ENSGT00940000159534.f #22	ENSGT00550000074828.b	ENSGT01030000234555.a.a.b.a.b.b	ENSGT01030000234555.a.a.b.a.b.a.c.o.b	ENSGT00940000158771	ENSGT00950000182956.b.b.b.e.a	ENSGT00390000009166	ENSGT00940000156735.c	ENSGT00940000154709.a.b.a.a	ENSGT01030000234588.a.a.b	ENSGT00940000156777.c	ENSGT01010000223242	ENSGT00940000156637.b	ENSGT00940000158040.d	ENSGT00940000157586.e	ENSGT00940000166065.a
Channel bull blenny	MODERN SPECIES	19	ncoa5 (ENSCGOG00000023741)	capza1a (ENSCGOG00000023773)	MOV10 (ENSCGOG00000023904)	ENSCGOG00000023921	ENSCGOG00000023936	TAFA3 (ENSCGOG00000023942)	slc16a1a (ENSCGOG00000023943)	sycp1 (ENSCGOG00000023944)	slc5a8l (ENSCGOG00000000478)	tshba (ENSCGOG00000000527)	slc25a55a (ENSCGOG00000000559)	tspan2a (ENSCGOG00000000650)	ngfb (ENSCGOG00000000652)	KCNA3 (ENSCGOG00000000655) #20	KCNA2 (ENSCGOG00000000659) #21	KCNA10 (ENSCGOG00000000663) #22	rplp2 (ENSCGOG00000000667)	ENSCGOG00000000671	ADORA3 (ENSCGOG00000000673)	ENSCGOG00000000681	tead3b (ENSCGOG00000000716)	smpd2a (ENSCGOG00000000726)	ENSCGOG00000000734	ENSCGOG00000000737	tnni1b (ENSCGOG00000000746)	csrp1b (ENSCGOG00000000758)	NAV1 (ENSCGOG00000000826)	mybphb (ENSCGOG00000000926)	SYT2 (ENSCGOG00000000933)	ENSCGOG00000000934	ENSCGOG00000000935
Pike perch	MODERN SPECIES	17	capza1a (ENSSLUG00000022903)	MOV10 (ENSSLUG00000023264)	ENSSLUG00000023600	ENSSLUG00000023629	TAFA3 (ENSSLUG00000023665)	slc16a1a (ENSSLUG00000023668)	sycp1 (ENSSLUG00000023675)	ENSSLUG00000023700	slc5a8l (ENSSLUG00000023703)	tshba (ENSSLUG00000023711)	slc25a55a (ENSSLUG00000023724)	tspan2a (ENSSLUG00000023764)	ngfb (ENSSLUG00000023769)	KCNA3 (ENSSLUG00000023774) #20	KCNA2 (ENSSLUG00000023779) #21	KCNA10 (ENSSLUG00000023783) #22	rplp2 (ENSSLUG00000023787)	ENSSLUG00000023793	ADORA3 (ENSSLUG00000023799)	ENSSLUG00000023814	tead3b (ENSSLUG00000023882)	smpd2a (ENSSLUG00000023896)	PKP1 (ENSSLUG00000023901)	ENSSLUG00000023907	tnni1b (ENSSLUG00000023922)	csrp1b (ENSSLUG00000023929)	NAV1 (ENSSLUG00000023954)	ENSSLUG00000024004	mybphb (ENSSLUG00000024013)	SYT2 (ENSSLUG00000024032)	ENSSLUG00000024038
Eupecaria_C	ANCESTRAL SPECIES		ENSGT00950000183119.a.a	ENSGT00940000156024.i.b	ENSGT00950000182945.b.a.a.a.a.a.a	ENSGT00940000166858	ENSGT00940000155644.a.b	ENSGT00940000154955.a	ENSGT00390000003368	ENSGT00970000193581	ENSGT00940000165906	ENSGT00940000158152.a.a	ENSGT00940000164224.a	ENSGT00940000157504.c.b	ENSGT00390000007725.A.b.c	ENSGT00940000160210.d.b #20	ENSGT00940000158688.c.e #21	ENSGT00940000159534.f #22	ENSGT00550000074828.b	ENSGT01030000234555.a.a.b.a.b.b	ENSGT01030000234555.a.a.b.a.b.a.c.o.b	ENSGT00940000158771	ENSGT00950000182956.b.b.b.e.a	ENSGT00390000009166	ENSGT00940000156735.c	ENSGT00940000154709.a.b.a.a	ENSGT01030000234588.a.a.b	ENSGT00940000156777.c	ENSGT01010000223242	ENSGT00940000156637.b	ENSGT00940000158040.d	ENSGT00940000157586.e	ENSGT00940000166065.a
Gilthead seabream	MODERN SPECIES	20	capza1a (ENSSAUG00010000352)	MOV10 (ENSSAUG00010026587)	ENSSAUG00010026577	ENSSAUG00010026575	TAFA3 (ENSSAUG00010026573)	slc16a1a (ENSSAUG00010026572)	sycp1 (ENSSAUG00010026571)	ENSSAUG00010026570	slc5a8l (ENSSAUG00010026569)	TSHb (ENSSAUG00010026567)	slc25a55a (ENSSAUG00010026566)	tspan2a (ENSSAUG00010026565)	ngfb (ENSSAUG00010026563)	KCNA3 (ENSSAUG00010026561) #20	KCNA2 (ENSSAUG00010026559) #21	KCNA10 (ENSSAUG00010026558) #22	rplp2 (ENSSAUG00010026557)	ENSSAUG00010026556	ADORA3 (ENSSAUG00010026555)	ENSSAUG00010026554	tead3b (ENSSAUG00010026550)	smpd2a (ENSSAUG00010026543)	ENSSAUG00010026540	ENSSAUG00010026537	tnni1b (ENSSAUG00010026535)	csrp1b (ENSSAUG00010026534)	NAV1 (ENSSAUG00010026401)	mybphb (ENSSAUG00010026361)	SYT2 (ENSSAUG00010026359)	ENSSAUG00010026358	ENSSAUG00010026357
Eupercaria_incertae_sedis	ANCESTRAL SPECIES		ENSGT00950000183119.a.a	ENSGT00940000156024.i.b	ENSGT00950000182945.b.a.a.a.a.a.a	ENSGT00940000166858	ENSGT00940000155644.a.b	ENSGT00940000154955.a	ENSGT00390000003368	ENSGT00970000193581	ENSGT00940000165906	ENSGT00940000158152.a.a	ENSGT00940000164224.a	ENSGT00940000157504.c.b	ENSGT00390000007725.A.b.c	ENSGT00940000160210.d.b #20	ENSGT00940000158688.c.e #21	ENSGT00940000159534.f #22	ENSGT00550000074828.b	ENSGT01030000234555.a.a.b.a.b.b	ENSGT01030000234555.a.a.b.a.b.a.c.p	ENSGT00940000158771	ENSGT00950000182956.b.b.b.e.a	ENSGT00390000009166	ENSGT00940000156735.c	ENSGT00940000154709.a.b.a.a	ENSGT01030000234588.a.a.b	ENSGT00940000156777.c	ENSGT01010000223242	ENSGT00940000156637.b	ENSGT00940000158040.d	ENSGT00940000157586.e	ENSGT00940000166065.a
European seabass	MODERN SPECIES	10	ENSDLAG00005021919	MOV10 (ENSDLAG00005022335)	RHOC (ENSDLAG00005032457)	ENSDLAG00005022829	TAFA3 (ENSDLAG00005022876)	slc16a1a (ENSDLAG00005022879)	sycp1 (ENSDLAG00005022883)	ENSDLAG00005022900	slc5a8l (ENSDLAG00005022911)	TSHB (ENSDLAG00005034142)	SLC25A22 (ENSDLAG00005033712)	tspan2a (ENSDLAG00005023119)	NGF (ENSDLAG00005033955)	KCNA3 (ENSDLAG00005023131) #20	KCNA2 (ENSDLAG00005033935) #21	KCNA10 (ENSDLAG00005030482) #22	RLA2 (ENSDLAG00005029038)	ADORA1 (ENSDLAG00005033545)	ENSDLAG00005029712	ENSDLAG00005029494	tead3b (ENSDLAG00005023164)	ENSDLAG00005023191	ENSDLAG00005023209	ENSDLAG00005030074	tnni1b (ENSDLAG00005023229)	CSRP1 (ENSDLAG00005023237)	ENSDLAG00005023257	ENSDLAG00005023560	mybphb (ENSDLAG00005023570)	ENSDLAG00005023606	ENSDLAG00005030077
Large yellow croaker	MODERN SPECIES	478	ENSLCRG00005003910	ncoa5 (ENSLCRG00005003882)	ncoa5 (ENSLCRG00005003880)	MOV10 (ENSLCRG00005003323)	ENSLCRG00005003307	ENSLCRG00005003284	TAFA3 (ENSLCRG00005003278)	slc16a1a (ENSLCRG00005003276)	sycp1 (ENSLCRG00005003265)	slc5a8l (ENSLCRG00005002294)	tshba (ENSLCRG00005002284)	slc25a55a (ENSLCRG00005002279)	tspan2a (ENSLCRG00005002275)	KCNA3 (ENSLCRG00005002272) #20	KCNA2 (ENSLCRG00005002266) #21	KCNA10 (ENSLCRG00005002263) #22	rplp2 (ENSLCRG00005002260)	ENSLCRG00005002257	ADORA3 (ENSLCRG00005002252)	ENSLCRG00005002250	cyp24a1 (ENSLCRG00005002173)	ENSLCRG00005023759	manbal (ENSLCRG00005023753)	SRC (ENSLCRG00005023516)	APCDD1L (ENSLCRG00005023411)	vapb (ENSLCRG00005023409)	rab22a (ENSLCRG00005023408)	BCDIN3D (ENSLCRG00005023401)	ENSLCRG00005023328	ENSLCRG00005023311	cers5 (ENSLCRG00005023185)
Tetraodontidae	ANCESTRAL SPECIES	1	ENSGT00530000064134.a.b	ENSGT00950000183119.a.a	ENSGT00940000156024.i.b	ENSGT00950000182945.b.a.a.a.a.a.a	ENSGT00940000166858	ENSGT00940000155644.a.b	ENSGT00940000154955.a	ENSGT00390000003368	ENSGT00940000165906	ENSGT00940000158152.a.a	ENSGT00940000164224.a	ENSGT00940000157504.c.b	ENSGT00390000007725.A.b.c	ENSGT00940000160210.d.b #20	ENSGT00940000158688.c.e #21	ENSGT00940000159534.f #22	ENSGT00550000074828.b	ENSGT01030000234555.a.a.b.a.b.b	ENSGT01030000234555.a.a.b.a.b.a.c.p	ENSGT00940000158771	ENSGT00950000182956.b.b.b.e.a	ENSGT00390000009166	ENSGT00940000156496.a.a	ENSGT00940000158791	ENSGT00940000153217	ENSGT00940000156138.d	ENSGT00940000156792.g.a	ENSGT00940000154964.y.a	ENSGT00940000155806.c.b	ENSGT00730000110997	ENSGT00490000043415.k.b
Fugu	MODERN SPECIES	10	ENSTRUG00000026860	MOV10 (ENSTRUG00000018298)	ENSTRUG00000011944	ENSTRUG00000018284	TAFA3 (ENSTRUG00000020466)	ENSTRUG00000027240	ENSTRUG00000032812	slc16a1 (ENSTRUG00000018257)	ENSTRUG00000026596	tshba (ENSTRUG00000018232)	slc25a55a (ENSTRUG00000018227)	tspan2a (ENSTRUG00000018212)	ngfb (ENSTRUG00000018209)	KCNA3 (ENSTRUG00000030530) #20	KCNA2 (ENSTRUG00000025540) #21	KCNA10 (ENSTRUG00000018203) #22	rplp2 (ENSTRUG00000024565)	ENSTRUG00000018199	ADORA3 (ENSTRUG00000030891)	ENSTRUG00000026233	ENSTRUG00000018184	tead3b (ENSTRUG00000018177)	smpd2 (ENSTRUG00000027078)	ENSTRUG00000018169	ENSTRUG00000025977	ENSTRUG00000018164	ENSTRUG00000027119	MAGI3 (ENSTRUG00000018140)	LRIG2 (ENSTRUG00000018129)	padi2 (ENSTRUG00000018111)	ENSTRUG00000030946
Tetraodon	MODERN SPECIES	2	ncoa5 (ENSTNIG00000018275)	capza1a (ENSTNIG00000018276)	MOV10 (ENSTNIG00000018277)	ENSTNIG00000018278	ENSTNIG00000018279	TAFA3 (ENSTNIG00000018280)	slc16a1a (ENSTNIG00000018281)	sycp1 (ENSTNIG00000018282)	slc5a8l (ENSTNIG00000018283)	tshba (ENSTNIG00000018284)	slc25a55a (ENSTNIG00000018285)	tspan2a (ENSTNIG00000018286)	ngfb (ENSTNIG00000018287)	KCNA3 (ENSTNIG00000018288) #20	KCNA2 (ENSTNIG00000018290) #21	KCNA10 (ENSTNIG00000018291) #22	rplp2 (ENSTNIG00000018292)	ENSTNIG00000018293	ADORA3 (ENSTNIG00000018294)	ENSTNIG00000018295	tead3b (ENSTNIG00000018296)	smpd2a (ENSTNIG00000018297)	ENSTNIG00000001309	MAGI3 (ENSTNIG00000018298)	LRIG2 (ENSTNIG00000018299)	padi2 (ENSTNIG00000018300)	RAP1GAP (ENSTNIG00000018303)	appl1 (ENSTNIG00000018301)	ENSTNIG00000018302	SLC2A1 (ENSTNIG00000018304)	phc2b (ENSTNIG00000018305)
Cod	MODERN SPECIES	4	ENSGMOG00000022585	barx1 (ENSGMOG00000023980)	ptpdc1a (ENSGMOG00000033201)	wnt7aa (ENSGMOG00000004893)	ENSGMOG00000024481	hdac11 (ENSGMOG00000001447)	acad9 (ENSGMOG00000005083)	ENSGMOG00000026129	EFCC1 (ENSGMOG00000030912)	ENSGMOG00000005004	ENSGMOG00000004997	ENSGMOG00000004987	ngfb (ENSGMOG00000029485)	ENSGMOG00000015379 #20	ENSGMOG00000019917 #21	ENSGMOG00000026097 #22	rplp2 (ENSGMOG00000015348)	ENSGMOG00000033353	ENSGMOG00000036320	ENSGMOG00000015304	tead3b (ENSGMOG00000023663)	ENSGMOG00000028122	ENSGMOG00000015210	ENSGMOG00000015197	tnni1b (ENSGMOG00000015185)	csrp1b (ENSGMOG00000015173)	ENSGMOG00000015079	ENSGMOG00000028764	mybphb (ENSGMOG00000015057)	ENSGMOG00000025882	ENSGMOG00000028656
Protacanthopterygii	ANCESTRAL SPECIES	24	ENSGT00950000183119.a.a	ENSGT00940000156024.i.b	ENSGT00950000182945.b.a.a.a.a.a.a	ENSGT00940000166858	ENSGT00940000155644.a.b	ENSGT00940000154955.a	ENSGT00390000003368	ENSGT00970000193609	ENSGT00940000165906	ENSGT00940000158152.a.a	ENSGT00940000164224.a	ENSGT00940000157504.c.b	ENSGT00390000007725.A.b.c	ENSGT00940000160210.d.b #20	ENSGT00940000158688.c #21	ENSGT00940000159534.f #22	ENSGT00550000074828.b.e.b	ENSGT01030000234555.a.a.b.a.b.b	ENSGT01030000234555.a.a.b.a.b.a.c	ENSGT00940000158771	ENSGT00950000182956.b.b.b.e.a	ENSGT00390000009166	ENSGT00940000156735.c	ENSGT00940000154709.a.b.a.a	ENSGT01030000234588.a.a.a.a	ENSGT00940000156777.c	ENSGT01010000223242	ENSGT00940000156637.b	ENSGT00940000158040.d	ENSGT00940000157586.e	ENSGT00940000166065.a
Salmoninae	DUPLICATION
Salmoninae	ANCESTRAL SPECIES	599																ENSGT00940000159534.f.a #22	ENSGT00550000074828.b.e.a.a	ENSGT01030000234555.a.a.b.a.b.b.e	ENSGT01030000234555.a.a.b.a.b.a.c.q	ENSGT00940000158771.c	ENSGT00950000182956.b.b.b.e.a.i.a	ENSGT00390000009166	ENSGT00940000156735.c.e	ENSGT00940000154709.a.b.a.a	ENSGT01030000234588.a.a.a.a.c	ENSGT00940000156777.c.a	ENSGT01010000223242	ENSGT00940000156637.b.c	ENSGT00940000158040.d.a	ENSGT00940000157586.e.h	ENSGT00940000166065.a.a
Huchen	MODERN SPECIES	1213																KCNA10 (ENSHHUG00000034854) #22	rplp2 (ENSHHUG00000034873)	ENSHHUG00000034877	ADORA3 (ENSHHUG00000034878)	ENSHHUG00000034894	tead3b (ENSHHUG00000034921)	SMPD2 (ENSHHUG00000035033)	PKP1 (ENSHHUG00000035044)	ENSHHUG00000035050	tnni1b (ENSHHUG00000035061)	csrp1b (ENSHHUG00000035084)	ENSHHUG00000035112	ENSHHUG00000035154	ENSHHUG00000035158	mybphb (ENSHHUG00000035171)	SYT2 (ENSHHUG00000035224)
Salmoninae_a	ANCESTRAL SPECIES	25	ENSGT00390000000873.a.a.e	ENSGT00950000183119.a.a.e	ENSGT00940000156024.i.b	ENSGT00950000182945.b.a.a.a.a.a.a	ENSGT00940000166858.c	ENSGT00940000155644.a.b.e	ENSGT00940000154955.a.h	ENSGT00970000193609	ENSGT00940000165906.h	ENSGT00940000158152.a.a.c	ENSGT00940000164224.a.g	ENSGT00940000157504.c.b.c	ENSGT00390000007725.A.b.c.d	ENSGT00940000160210.d.b.a #20	ENSGT00940000158688.c.c.a #21	ENSGT00940000159534.f.a #22	ENSGT00550000074828.b.e.b.b	ENSGT00550000074828.b.e.a.a	ENSGT01030000234555.a.a.b.a.b.b.e	ENSGT01030000234555.a.a.b.a.b.a.c.q	ENSGT00940000158771.c	ENSGT00950000182956.b.b.b.e.a.i.a	ENSGT00390000009166	ENSGT00940000156735.c.e	ENSGT00940000154709.a.b.a.a	ENSGT01030000234588.a.a.a.a.c	ENSGT00940000156777.c.a	ENSGT01010000223242	ENSGT00940000156637.b.c	ENSGT00940000158040.d.a	ENSGT00940000157586.e.h
Salmo	ANCESTRAL SPECIES	6	ENSGT00390000000873.a.a.e	ENSGT00950000183119.a.a.e	ENSGT00940000156024.i.b	ENSGT00950000182945.b.a.a.a.a.a.a	ENSGT00940000166858.c	ENSGT00940000155644.a.b.e	ENSGT00940000154955.a.h	ENSGT00970000193609	ENSGT00940000165906.h	ENSGT00940000158152.a.a.c	ENSGT00940000164224.a.g	ENSGT00940000157504.c.b.c	ENSGT00390000007725.A.b.c.d	ENSGT00940000160210.d.b.a #20	ENSGT00940000158688.c.c.a #21	ENSGT00940000159534.f.a #22	ENSGT00550000074828.b.e.a.a	ENSGT01030000234555.a.a.b.a.b.b.e	ENSGT01030000234555.a.a.b.a.b.a.c.q	ENSGT00940000158771.c	ENSGT00950000182956.b.b.b.e.a.i.a	ENSGT00390000009166	ENSGT00940000156735.c.e	ENSGT00940000154709.a.b.a.a	ENSGT01030000234588.a.a.a.a.c	ENSGT00940000156777.c.a	ENSGT00940000156637.b.c	ENSGT00940000158040.d.a	ENSGT00940000157586.e.h	ENSGT00940000166065.a.a	ENSGT01030000234648.a.b.a.a.a.f.b.h
Atlantic salmon	MODERN SPECIES	14	CAZA1 (ENSSSAG00000054188)	st7l (ENSSSAG00000087326)	MOV10 (ENSSSAG00000051630)	rhoca (ENSSSAG00000051579)	ENSSSAG00000051531	TAFA3 (ENSSSAG00000051516)	slc16a1a (ENSSSAG00000051502)	si:ch211-105j21.9 (ENSSSAG00000051497)	slc5a8l (ENSSSAG00000050797)	tshba (ENSSSAG00000050784)	slc25a55a (ENSSSAG00000077193)	tspan2a (ENSSSAG00000109688)	ngfb (ENSSSAG00000089293)	KCNA3 (ENSSSAG00000089250) #20	ENSSSAG00000110717 #21	KCNA10 (ENSSSAG00000077173) #22	rplp2 (ENSSSAG00000107879)	ENSSSAG00000117259	ENSSSAG00000106632	ENSSSAG00000109092	tead3b (ENSSSAG00000077012)	ENSSSAG00000077001	PKP1 (ENSSSAG00000076999)	ENSSSAG00000076994	tnni1b (ENSSSAG00000115603)	csrp1b (ENSSSAG00000102520)	NAV1 (ENSSSAG00000075240)	mybphb (ENSSSAG00000075107)	ENSSSAG00000075099	ENSSSAG00000108666	ENSSSAG00000074204
River trout	MODERN SPECIES	7	wnt2ba (ENSSTUG00000017953)	st7l (ENSSTUG00000018013)	capza1a (ENSSTUG00000019244)	MOV10 (ENSSTUG00000019770)	rhoca (ENSSTUG00000020517)	ENSSTUG00000020538	TAFA3 (ENSSTUG00000020589)	slc16a1a (ENSSTUG00000020598)	si:ch211-105j21.9 (ENSSTUG00000020612)	slc5a8l (ENSSTUG00000020686)	tshba (ENSSTUG00000021072)	slc25a55a (ENSSTUG00000021094)	tspan2a (ENSSTUG00000021138)	ngfb (ENSSTUG00000021151)	KCNA2 (ENSSTUG00000021158) #21	KCNA10 (ENSSTUG00000021176) #22	ENSSTUG00000021185	rplp2 (ENSSTUG00000021189)	ENSSTUG00000021193	ADORA3 (ENSSTUG00000021200)	ENSSTUG00000021246	TEAD3 (ENSSTUG00000021317)	smpd2a (ENSSTUG00000021445)	PKP1 (ENSSTUG00000021463)	ENSSTUG00000021480	tnni1b (ENSSTUG00000021493)	csrp1b (ENSSTUG00000021573)	NAV1 (ENSSTUG00000021698)	mybphb (ENSSTUG00000025361)	SYT2 (ENSSTUG00000025631)	ENSSTUG00000025641
Oncorhynchus	ANCESTRAL SPECIES	5	ENSGT00390000000873.a.a.e	ENSGT00950000183119.a.a.e	ENSGT00940000156024.i.b	ENSGT00950000182945.b.a.a.a.a.a.a	ENSGT00940000166858.c	ENSGT00940000155644.a.b.e	ENSGT00940000154955.a.h	ENSGT00970000193609	ENSGT00940000165906.h	ENSGT00940000158152.a.a.c	ENSGT00940000164224.a.g	ENSGT00940000157504.c.b.c	ENSGT00390000007725.A.b.c.d	ENSGT00940000160210.d.b.a #20	ENSGT00940000158688.c.c.a #21	ENSGT00940000159534.f.a #22	ENSGT00550000074828.b.e.b.b	ENSGT00550000074828.b.e.a.a	ENSGT01030000234555.a.a.b.a.b.b.e	ENSGT01030000234555.a.a.b.a.b.a.c.q	ENSGT00940000158771.c	ENSGT00950000182956.b.b.b.e.a.i.a	ENSGT00390000009166	ENSGT00940000156735.c.e	ENSGT00940000154709.a.b.a.a	ENSGT01030000234588.a.a.a.a.c	ENSGT00940000156777.c.a	ENSGT01010000223242	ENSGT00940000156637.b.c	ENSGT00940000158040.d.a	ENSGT00940000157586.e.h
Oncorhynchus_a	ANCESTRAL SPECIES	4	ENSGT00390000000873.a.a.e	ENSGT00950000183119.a.a.e	ENSGT00940000156024.i.b	ENSGT00950000182945.b.a.a.a.a.a.a	ENSGT00940000166858.c	ENSGT00940000155644.a.b.e	ENSGT00940000154955.a.h	ENSGT00970000193609	ENSGT00940000165906.h	ENSGT00940000158152.a.a.c	ENSGT00940000164224.a.g	ENSGT00940000157504.c.b.c	ENSGT00390000007725.A.b.c.d	ENSGT00940000160210.d.b.a #20	ENSGT00940000158688.c.c.a #21	ENSGT00940000159534.f.a #22	ENSGT00550000074828.b.e.b.b	ENSGT00550000074828.b.e.a.a	ENSGT01030000234555.a.a.b.a.b.b.e	ENSGT01030000234555.a.a.b.a.b.a.c.q	ENSGT00940000158771.c	ENSGT00950000182956.b.b.b.e.a.i.a	ENSGT00390000009166	ENSGT00940000156735.c.e	ENSGT00940000154709.a.b.a.a	ENSGT01030000234588.a.a.a.a.c	ENSGT00940000156777.c.a	ENSGT00940000156637.b.c	ENSGT00940000158040.d.a	ENSGT00940000157586.e.h	ENSGT00940000166065.a.a
Coho salmon	MODERN SPECIES	25	MOV10 (ENSOKIG00005006296)	rhoca (ENSOKIG00005006228)	ENSOKIG00005006080	TAFA3 (ENSOKIG00005006071)	slc16a1a (ENSOKIG00005006059)	ENSOKIG00005006032	si:ch211-105j21.9 (ENSOKIG00005006009)	slc5a8l (ENSOKIG00005005864)	tshba (ENSOKIG00005005820)	ENSOKIG00005005807	slc25a55a (ENSOKIG00005005760)	tspan2a (ENSOKIG00005005735)	ngfb (ENSOKIG00005005728)	KCNA3 (ENSOKIG00005005725) #20	KCNA2 (ENSOKIG00005005711) #21	KCNA10 (ENSOKIG00005005703) #22	ENSOKIG00005005699	rplp2 (ENSOKIG00005005696)	ENSOKIG00005005692	ADORA3 (ENSOKIG00005005688)	ENSOKIG00005005644	TEAD3 (ENSOKIG00005005515)	smpd2a (ENSOKIG00005005468)	PKP1 (ENSOKIG00005005456)	ENSOKIG00005005450	tnni1b (ENSOKIG00005005423)	csrp1b (ENSOKIG00005005410)	NAV1 (ENSOKIG00005003723)	mybphb (ENSOKIG00005003578)	SYT2 (ENSOKIG00005003554)	ENSOKIG00005003545
Chinook salmon	MODERN SPECIES	31	MOV10 (ENSOTSG00005029770)	ENSOTSG00005029763	ENSOTSG00005029755	TAFA3 (ENSOTSG00005029751)	slc16a1a (ENSOTSG00005029749)	ENSOTSG00005029747	si:ch211-105j21.9 (ENSOTSG00005029745)	slc5a8l (ENSOTSG00005029699)	tshba (ENSOTSG00005029697)	slc25a55a (ENSOTSG00005029669)	tspan2a (ENSOTSG00005029668)	ngfb (ENSOTSG00005029667)	KCNA3 (ENSOTSG00005029666) #20	KCNA2 (ENSOTSG00005029665) #21	ENSOTSG00005029664	KCNA10 (ENSOTSG00005029663) #22	rplp2 (ENSOTSG00005029661)	ENSOTSG00005029660	ADORA3 (ENSOTSG00005029644)	ENSOTSG00005029629	tead3b (ENSOTSG00005041977)	smpd2a (ENSOTSG00005041975)	PKP1 (ENSOTSG00005041973)	ENSOTSG00005041971	tnni1b (ENSOTSG00005041969)	csrp1b (ENSOTSG00005041968)	NAV1 (ENSOTSG00005041561)	mybphb (ENSOTSG00005041560)	SYT2 (ENSOTSG00005041559)	ENSOTSG00005041558	GRM4 (ENSOTSG00005041557)
Rainbow trout	MODERN SPECIES	28	ENSOMYG00000003143	MOV10 (ENSOMYG00000002260)	rhoca (ENSOMYG00000032604)	ENSOMYG00000032572	ENSOMYG00000032555	TAFA3 (ENSOMYG00000032547)	slc16a1a (ENSOMYG00000032541)	si:ch211-105j21.9 (ENSOMYG00000032534)	slc5a8l (ENSOMYG00000032490)	tshba (ENSOMYG00000032448)	slc25a55a (ENSOMYG00000032405)	tspan2a (ENSOMYG00000032374)	ngfb (ENSOMYG00000032361)	KCNA3 (ENSOMYG00000032348) #20	ENSOMYG00000032342 #21	KCNA10 (ENSOMYG00000032335) #22	ENSOMYG00000032329	ENSOMYG00000032313	ENSOMYG00000032302	ENSOMYG00000032298	ENSOMYG00000032281	ENSOMYG00000052804	ENSOMYG00000059435	tead3b (ENSOMYG00000032250)	ENSOMYG00000032211	ENSOMYG00000072636	PKP1 (ENSOMYG00000032188)	ENSOMYG00000032181	tnni1b (ENSOMYG00000032167)	csrp1b (ENSOMYG00000032147)	ENSOMYG00000059254
Salmoninae	ANCESTRAL SPECIES	42	ENSGT00940000155343.a.b.b	ENSGT00950000182852.B.a.b	ENSGT00940000166225.d	ENSGT00390000000873.a.a.f	ENSGT00950000183119.a.a.f	ENSGT00940000166858.d	ENSGT00940000155644.a.b.f	ENSGT00940000154955.a.g	ENSGT00940000165906.g	ENSGT00940000158152.a.a.d	ENSGT00940000164224.a.h	ENSGT00940000157504.c.b.d	ENSGT00390000007725.A.b.c.c	ENSGT00940000160210.d.b.b #20	ENSGT00940000158688.c.c.b #21	ENSGT00940000159534.f.b #22	ENSGT00550000074828.b.e.b	ENSGT01030000234555.a.a.b.a.b.b.f	ENSGT01030000234555.a.a.b.a.b.a.c.r.a	ENSGT01030000234555.a.a.b.a.b.a.c.r.b	ENSGT00940000158771.d	ENSGT00950000182956.b.b.b.e.a.i.b	ENSGT00940000156735.c.f	ENSGT01030000234588.a.a.a.a.d	ENSGT00940000156777.c.b	ENSGT00940000156637.b.d	ENSGT00940000158040.d.b	ENSGT00940000157586.e.g	ENSGT00940000166065.a.b	ENSGT00390000013981.b	ENSGT00940000160123.e.b.a.a.a
Huchen	MODERN SPECIES	2039								slc16a1a (ENSHHUG00000028752)	slc5a8l (ENSHHUG00000028760)	tshba (ENSHHUG00000028783)	slc25a55a (ENSHHUG00000028792)	tspan2a (ENSHHUG00000028815)	ngfb (ENSHHUG00000028819)	KCNA3 (ENSHHUG00000028822) #20	KCNA2 (ENSHHUG00000028825) #21	KCNA10 (ENSHHUG00000028832) #22	rplp2 (ENSHHUG00000028838)	ENSHHUG00000028845
Salmoninae_a	ANCESTRAL SPECIES	29	ENSGT00940000155343.a.b.b	ENSGT00950000182852.B.a.b	ENSGT00940000166225.d	ENSGT00390000000873.a.a.f	ENSGT00950000183119.a.a.f	ENSGT00940000166858.d	ENSGT00940000155644.a.b.f	ENSGT00940000154955.a.g	ENSGT00940000165906.g	ENSGT00940000158152.a.a.d	ENSGT00940000164224.a.h	ENSGT00940000157504.c.b.d	ENSGT00390000007725.A.b.c.c	ENSGT00940000160210.d.b.b #20	ENSGT00940000158688.c.c.b #21	ENSGT00940000159534.f.b #22	ENSGT00550000074828.b.e.b.a	ENSGT01030000234555.a.a.b.a.b.b.f	ENSGT01030000234555.a.a.b.a.b.a.c.r.a	ENSGT01030000234555.a.a.b.a.b.a.c.r.b	ENSGT00940000158771.d	ENSGT00950000182956.b.b.b.e.a.i.b	ENSGT00940000156735.c.f	ENSGT01030000234588.a.a.a.a.d	ENSGT00940000156777.c.b	ENSGT00940000156637.b.d	ENSGT00940000158040.d.b	ENSGT00940000157586.e.g	ENSGT00940000166065.a.b	ENSGT00390000013981.b	ENSGT00940000160123.e.b.a.a.a
Salmo	ANCESTRAL SPECIES	33	ENSGT00940000155343.a.b.b	ENSGT00950000182852.B.a.b	ENSGT00940000166225.d	ENSGT00390000000873.a.a.f	ENSGT00950000183119.a.a.f	ENSGT00940000166858.d	ENSGT00940000155644.a.b.f	ENSGT00940000154955.a.g	ENSGT00940000165906.g	ENSGT00940000158152.a.a.d	ENSGT00940000164224.a.h	ENSGT00940000157504.c.b.d	ENSGT00390000007725.A.b.c.c	ENSGT00940000160210.d.b.b #20	ENSGT00940000158688.c.c.b #21	ENSGT00940000159534.f.b #22	ENSGT00550000074828.b.e.a.b	ENSGT00550000074828.b.e.b.a	ENSGT01030000234555.a.a.b.a.b.b.f	ENSGT01030000234555.a.a.b.a.b.a.c.r.a	ENSGT01030000234555.a.a.b.a.b.a.c.r.b	ENSGT00940000158771.d	ENSGT00950000182956.b.b.b.e.a.i.b	ENSGT00950000182956.b.b.b.e.a.j	ENSGT00940000156735.c.f	ENSGT01030000234588.a.a.a.a.d	ENSGT00940000156777.c.b	ENSGT00940000156637.b.d	ENSGT00940000158040.d.b	ENSGT00940000157586.e.g	ENSGT00940000166065.a.b
Atlantic salmon	MODERN SPECIES	3	CTTNBP2NL (ENSSSAG00000100612)	ENSSSAG00000064739	st7l (ENSSSAG00000093578)	ENSSSAG00000069988	ppm1h (ENSSSAG00000070535)	TAFA3 (ENSSSAG00000091161)	ENSSSAG00000089254	slc16a1a (ENSSSAG00000070580)	slc5a8l (ENSSSAG00000070589)	ENSSSAG00000070645	slc25a55a (ENSSSAG00000094855)	tspan2a (ENSSSAG00000119978)	ngfb (ENSSSAG00000077182)	KCNA3 (ENSSSAG00000117648) #20	ENSSSAG00000107650 #21	KCNA10 (ENSSSAG00000070684) #22	ENSSSAG00000087713	RLA2 (ENSSSAG00000070694)	ENSSSAG00000070711	ENSSSAG00000077162	ENSSSAG00000113453	ENSSSAG00000077051	ENSSSAG00000071165	PKP1 (ENSSSAG00000071648)	TNNI1 (ENSSSAG00000071655)	csrp1 (ENSSSAG00000071677)	NAV1 (ENSSSAG00000071694)	mybphb (ENSSSAG00000071742)	ENSSSAG00000111107	ENSSSAG00000004157	zgc:66479 (ENSSSAG00000004175)
River trout	MODERN SPECIES	5	CTTNBP2NL (ENSSTUG00000017769)	wnt2ba (ENSSTUG00000017727)	st7l (ENSSTUG00000017411)	ENSSTUG00000016767	ENSSTUG00000016740	ENSSTUG00000016634	TAFA3 (ENSSTUG00000016601)	slc16a1a (ENSSTUG00000016568)	slc5a8l (ENSSTUG00000016525)	tshba (ENSSTUG00000016519)	slc25a55a (ENSSTUG00000016462)	tspan2a (ENSSTUG00000016435)	ngfb (ENSSTUG00000016427)	KCNA3 (ENSSTUG00000016424) #20	KCNA2 (ENSSTUG00000016410) #21	KCNA10 (ENSSTUG00000016403) #22	rplp2 (ENSSTUG00000016398)	ADORA3 (ENSSTUG00000016383)	ENSSTUG00000016360	ENSSTUG00000019906	tead3b (ENSSTUG00000019715)	PKP1 (ENSSTUG00000019675)	tnni1b (ENSSTUG00000019641)	csrp1b (ENSSTUG00000019617)	NAV1 (ENSSTUG00000019368)	mybphb (ENSSTUG00000019146)	SYT2 (ENSSTUG00000019102)	zgc:66479 (ENSSTUG00000019083)	ENSSTUG00000018979	ENSSTUG00000018915	ENSSTUG00000018634
Oncorhynchus	ANCESTRAL SPECIES	1	ENSGT00940000155343.a.b.b	ENSGT00950000182852.B.a.b	ENSGT00940000166225.d	ENSGT00390000000873.a.a.f	ENSGT00950000183119.a.a.f	ENSGT00940000166858.d	ENSGT00940000155644.a.b.f	ENSGT00940000154955.a.g	ENSGT00940000165906.g	ENSGT00940000158152.a.a.d	ENSGT00940000164224.a.h	ENSGT00940000157504.c.b.d.b	ENSGT00390000007725.A.b.c.c	ENSGT00940000160210.d.b.b #20	ENSGT00940000158688.c.c.b #21	ENSGT00940000159534.f.b #22	ENSGT00550000074828.b.e.b.a	ENSGT01030000234555.a.a.b.a.b.b.f	ENSGT01030000234555.a.a.b.a.b.a.c.r.a	ENSGT01030000234555.a.a.b.a.b.a.c.r.b	ENSGT00940000158771.d	ENSGT00950000182956.b.b.b.e.a.i.b	ENSGT00940000156735.c.f	ENSGT01030000234588.a.a.a.a.d	ENSGT00940000156777.c.b	ENSGT00940000156637.b.d	ENSGT00940000158040.d.b	ENSGT00940000157586.e.g.a.b	ENSGT00940000166065.a.b	ENSGT00390000013981.b	ENSGT00940000160123.e.b.a.a.a
Oncorhynchus_a	ANCESTRAL SPECIES	54	ENSGT00940000155343.a.b.b	ENSGT00950000182852.B.a.b	ENSGT00940000166225.d	ENSGT00390000000873.a.a.f	ENSGT00950000183119.a.a.f	ENSGT00940000166858.d	ENSGT00940000155644.a.b.f	ENSGT00940000154955.a.g	ENSGT00940000165906.g	ENSGT00940000158152.a.a.d	ENSGT00940000164224.a.h	ENSGT00940000157504.c.b.d.b	ENSGT00390000007725.A.b.c.c	ENSGT00940000160210.d.b.b #20	ENSGT00940000158688.c.c.b #21	ENSGT00940000159534.f.b #22	ENSGT00550000074828.b.e.b.a	ENSGT01030000234555.a.a.b.a.b.b.f	ENSGT01030000234555.a.a.b.a.b.a.c.r.a	ENSGT01030000234555.a.a.b.a.b.a.c.r.b	ENSGT00940000158771.d	ENSGT00950000182956.b.b.b.e.a.i.b	ENSGT00940000156735.c.f	ENSGT01030000234588.a.a.a.a.d	ENSGT00940000156777.c.b	ENSGT00940000156637.b.d	ENSGT00940000158040.d.b	ENSGT00940000157586.e.g.b	ENSGT01000000220204	ENSGT00940000157586.e.g.a.a	ENSGT00940000166065.a.b
Coho salmon	MODERN SPECIES		CTTNBP2NL (ENSOKIG00005000907)	ENSOKIG00005000902	wnt2ba (ENSOKIG00005000896)	st7l (ENSOKIG00005000841)	ENSOKIG00005000752	ENSOKIG00005000725	TAFA3 (ENSOKIG00005000724)	slc16a1a (ENSOKIG00005000718)	slc5a8l (ENSOKIG00005000695)	tshba (ENSOKIG00005000684)	slc25a55a (ENSOKIG00005000676)	tspan2a (ENSOKIG00005000666)	ngfb (ENSOKIG00005000657)	KCNA3 (ENSOKIG00005000653) #20	KCNA2 (ENSOKIG00005000648) #21	KCNA10 (ENSOKIG00005000640) #22	ENSOKIG00005000627	ENSOKIG00005000583	ADORA3 (ENSOKIG00005000573)	ENSOKIG00005000562	TEAD3 (ENSOKIG00005000515)	PKP1 (ENSOKIG00005000493)	tnni1b (ENSOKIG00005000487)	csrp1b (ENSOKIG00005000477)	NAV1 (ENSOKIG00005000458)	mybphb (ENSOKIG00005000411)	SYT2 (ENSOKIG00005000389)	zgc:66479 (ENSOKIG00005000378)	ENSOKIG00005000356	ENSOKIG00005000300	ENSOKIG00005000258
Chinook salmon	MODERN SPECIES	11	wnt2ba (ENSOTSG00005000592)	st7l (ENSOTSG00005000612)	ENSOTSG00005000641	capza1a (ENSOTSG00005000663)	ENSOTSG00005000776	TAFA3 (ENSOTSG00005000789)	slc16a1a (ENSOTSG00005000802)	slc5a8l (ENSOTSG00005000817)	slc25a55a (ENSOTSG00005000834)	ENSOTSG00005000841	tspan2a (ENSOTSG00005000844)	ENSOTSG00005000851	KCNA3 (ENSOTSG00005000890) #20	ENSOTSG00005000891	KCNA2 (ENSOTSG00005000892) #21	KCNA10 (ENSOTSG00005000894) #22	ENSOTSG00005000898	ENSOTSG00005000902	ADORA3 (ENSOTSG00005000911)	ENSOTSG00005000918	ENSOTSG00005000930	tead3b (ENSOTSG00005001016)	PKP1 (ENSOTSG00005001160)	tnni1b (ENSOTSG00005001165)	csrp1b (ENSOTSG00005001169)	NAV1 (ENSOTSG00005001176)	mybphb (ENSOTSG00005001206)	ENSOTSG00005001210	SYT2 (ENSOTSG00005001217)	ENSOTSG00005001222	zgc:66479 (ENSOTSG00005001225)
Rainbow trout	MODERN SPECIES	8	CTTNBP2NL (ENSOMYG00000058135)	ENSOMYG00000023538	st7l (ENSOMYG00000023904)	ENSOMYG00000025455	ENSOMYG00000026252	ENSOMYG00000026282	slc16a1a (ENSOMYG00000026313)	slc5a8l (ENSOMYG00000026335)	tshba (ENSOMYG00000026355)	slc25a55a (ENSOMYG00000026429)	tspan2a (ENSOMYG00000026634)	ngfb (ENSOMYG00000075987)	KCNA3 (ENSOMYG00000026647) #20	ENSOMYG00000026654 #21	ENSOMYG00000061975	KCNA10 (ENSOMYG00000026668) #22	ENSOMYG00000055644	rplp2 (ENSOMYG00000026677)	ENSOMYG00000026697	ENSOMYG00000026732	tead3b (ENSOMYG00000026879)	PKP1 (ENSOMYG00000026971)	tnni1b (ENSOMYG00000026998)	csrp1 (ENSOMYG00000027036)	ENSOMYG00000049179	NAV1 (ENSOMYG00000005205)	mybphb (ENSOMYG00000005590)	ENSOMYG00000005709	ENSOMYG00000005720	zgc:66479 (ENSOMYG00000005767)	ENSOMYG00000005815
Northern pike	MODERN SPECIES	16	st7l (ENSELUG00000021927)	ENSELUG00000021914	rhoca (ENSELUG00000021901)	ENSELUG00000021890	TAFA3 (ENSELUG00000021843)	slc16a1a (ENSELUG00000021818)	sycp1 (ENSELUG00000021788)	si:ch211-105j21.9 (ENSELUG00000021699)	slc5a8l (ENSELUG00000031428)	tshba (ENSELUG00000023564)	slc25a55a (ENSELUG00000023559)	tspan2a (ENSELUG00000023547)	ngfb (ENSELUG00000023507)	KCNA3 (ENSELUG00000023494) #20	KCNA2 (ENSELUG00000023489) #21	KCNA10 (ENSELUG00000023484) #22	rplp2 (ENSELUG00000028982)	ENSELUG00000023465	ENSELUG00000023455	ENSELUG00000023438	ENSELUG00000021091	ENSELUG00000021032	ENSELUG00000020961	igfn1.1 (ENSELUG00000020910)	GRM4 (ENSELUG00000020642)	nudt3b (ENSELUG00000020596)	rps10 (ENSELUG00000020573)	pacsin1b (ENSELUG00000020536)	SPDEF (ENSELUG00000001273)	ilrun (ENSELUG00000020501)	ENSELUG00000031687
Otomorpha	ANCESTRAL SPECIES	76	ENSGT00950000183119.a.a	ENSGT00940000156024.i.b	ENSGT00950000182945.b.a.a.a.a.b.a	ENSGT00940000166858	ENSGT00940000155644.a.b	ENSGT00940000154955.a	ENSGT00390000003368	ENSGT00970000193609	ENSGT00940000165906	ENSGT00940000158152.a.a	ENSGT00940000164224.a	ENSGT00940000157504.c.b	ENSGT00390000007725.A.b.c	ENSGT00940000160210.d.b #20	ENSGT00940000158688.c #21	ENSGT00940000159534.f #22	ENSGT00550000074828.b	ENSGT00970000197066	ENSGT01030000234555.a.a.b.a.b.b	ENSGT01030000234555.a.a.b.a.b.a.c	ENSGT00940000158771	ENSGT00950000182956.b.b.b.e.a	ENSGT00390000009166.b	ENSGT00940000156735.c	ENSGT00940000154709.a.b.a.a	ENSGT01030000234588.a.a.a.a	ENSGT00940000156777.c	ENSGT01010000223242	ENSGT00940000156637.b	ENSGT00940000158040.d	ENSGT00940000157586.e
Clupeiformes	ANCESTRAL SPECIES	224														ENSGT00940000160210.d.b #20	ENSGT00940000158688.c #21	ENSGT00940000159534.f #22	ENSGT00550000074828.b	ENSGT01030000234555.a.a.b.a.b.b.c	ENSGT01030000234555.a.a.b.a.b.a.c	ENSGT00940000158771	ENSGT00950000182956.b.b.b.e.a	ENSGT00390000009166.a	ENSGT00940000156735.d	ENSGT00940000154709.a.b.a.b	ENSGT01030000234588.a.a.a.b	ENSGT00390000009166.b	ENSGT00940000156735.c	ENSGT00940000154709.a.b.a.a	ENSGT01030000234588.a.a.b	ENSGT00940000156777.c	ENSGT00940000156637.b
Denticle herring	MODERN SPECIES	3	MON1B (ENSDCDG00000019807)	rnpep (ENSDCDG00000019376)	cyb5r1 (ENSDCDG00000017805)	adipor1a (ENSDCDG00000017765)	rabif (ENSDCDG00000017761)	ENSDCDG00000017760	kdm5ba (ENSDCDG00000016993)	ipo9 (ENSDCDG00000016787)	shisa4 (ENSDCDG00000016779)	LMOD1 (ENSDCDG00000016777)	timm17a (ENSDCDG00000016774)	rap1ab (ENSDCDG00000016773)	INKA2 (ENSDCDG00000016771)	KCNA3 (ENSDCDG00000016770) #20	KCNA2 (ENSDCDG00000016768) #21	KCNA10 (ENSDCDG00000016767) #22	rplp2 (ENSDCDG00000016763)	ENSDCDG00000016760	ENSDCDG00000016758	ENSDCDG00000016757	ENSDCDG00000016750	tead3b (ENSDCDG00000016722)	ENSDCDG00000016719	ENSDCDG00000016717	ENSDCDG00000016714	tnni1b (ENSDCDG00000016712)	csrp1b (ENSDCDG00000016707)	ENSDCDG00000016704	HELZ2 (ENSDCDG00000016701)	STMN3 (ENSDCDG00000016696)	arfrp1 (ENSDCDG00000016693)
Atlantic herring	MODERN SPECIES	21	pmepa1 (ENSCHAG00000018352)	fkbp11 (ENSCHAG00000018361)	ccdc65 (ENSCHAG00000018376)	ENSCHAG00000018382	ENSCHAG00000000180	ENSCHAG00000000183	aldh4a1 (ENSCHAG00000000271)	cxxc1b (ENSCHAG00000001131)	mdm4 (ENSCHAG00000002329)	LRRN2 (ENSCHAG00000002625)	ENSCHAG00000002667	si:ch1073-376c22.1 (ENSCHAG00000002725)	INKA2 (ENSCHAG00000002763)	KCNA3 (ENSCHAG00000002783) #20	KCNA2 (ENSCHAG00000002805) #21	KCNA10 (ENSCHAG00000002880) #22	rplp2 (ENSCHAG00000002973)	ENSCHAG00000002987	ENSCHAG00000003052	ADORA3 (ENSCHAG00000003099)	ENSCHAG00000003199	ENSCHAG00000003247	tead3b (ENSCHAG00000003280)	smpd2a (ENSCHAG00000003372)	PKP1 (ENSCHAG00000003411)	ENSCHAG00000003484	ENSCHAG00000003507	tnni1b (ENSCHAG00000003533)	csrp1b (ENSCHAG00000003604)	NAV1 (ENSCHAG00000003705)	mybphb (ENSCHAG00000005891)
Otophysi	ANCESTRAL SPECIES	68	ENSGT00950000183119.a.a	ENSGT00940000156024.i.b	ENSGT00950000182945.b.a.a.a.a.b.a	ENSGT00940000166858	ENSGT00940000155644.a.b	ENSGT00940000154955.a	ENSGT00390000003368	ENSGT00970000193609	ENSGT00940000165906	ENSGT00940000158152.a.a	ENSGT00940000164224.a	ENSGT00940000157504.c.b	ENSGT00390000007725.A.b.c	ENSGT00940000160210.d.b #20	ENSGT00940000158688.c #21	ENSGT00940000159534.f #22	ENSGT00550000074828.b	ENSGT00970000197066
Characiphysae	ANCESTRAL SPECIES	2	ENSGT00940000156024.i.b	ENSGT00950000182945.b.a.a.a.a.b.a	ENSGT00940000166858	ENSGT00940000155644.a.b	ENSGT00940000154955.a.d	ENSGT00940000154955.a.c	ENSGT00390000003368	ENSGT00970000193609	ENSGT00940000165906	ENSGT00940000158152.a.a	ENSGT00940000164224.a	ENSGT00940000157504.c.b	ENSGT00390000007725.A.b.c	ENSGT00940000160210.d.b #20	ENSGT00940000158688.c #21	ENSGT00940000159534.f #22	ENSGT00550000074828.b	ENSGT00970000197066	ENSGT00390000002517.a.a	ENSGT00940000153804.B	ENSGT00940000159521	ENSGT00950000183080.a.a.e.b.d.b	ENSGT00940000156107.e.b	ENSGT00940000154281	ENSGT00950000183019.f.b.a	ENSGT00940000157032.c.b	ENSGT01020000230394.e.a.a.b.a.a.b.a.a	ENSGT00940000165995	ENSGT00940000157446	ENSGT00990000203541.a.b.b	ENSGT00390000018852
Characiphysae_b	ANCESTRAL SPECIES		ENSGT00940000156024.i.b	ENSGT00950000182945.b.a.a.a.a.b.a	ENSGT00940000166858	ENSGT00940000155644.a.b	ENSGT00940000154955.a.d	ENSGT00940000154955.a.c	ENSGT00390000003368	ENSGT00970000193609	ENSGT00940000165906	ENSGT00940000158152.a.a	ENSGT00940000164224.a	ENSGT00940000157504.c.b	ENSGT00390000007725.A.b.c	ENSGT00940000160210.d.b #20	ENSGT00940000158688.c #21	ENSGT00940000159534.f #22	ENSGT00550000074828.b	ENSGT00390000002517.b	ENSGT00940000153804.B	ENSGT00940000159521	ENSGT00950000183080.a.a.e.b.d.b	ENSGT00940000156107.e.b	ENSGT00940000154281	ENSGT00950000183019.f.b.a	ENSGT00940000157032.c.b	ENSGT01020000230394.e.a.a.b.a.a.b.a.a	ENSGT00940000165995	ENSGT00940000157446	ENSGT00990000203541.a.b.b	ENSGT00390000018852	ENSGT00940000159659.d.a.d
Characoidei	ANCESTRAL SPECIES		ENSGT00940000156024.i.b	ENSGT00950000182945.b.a.a.a.a.b.a	ENSGT00940000166858	ENSGT00940000155644.a.b	ENSGT00940000154955.a.d	ENSGT00940000154955.a.c	ENSGT00390000003368	ENSGT00970000193609	ENSGT00940000165906	ENSGT00940000158152.a.a	ENSGT00940000164224.a	ENSGT00940000157504.c.b	ENSGT00390000007725.A.b.c	ENSGT00940000160210.d.b #20	ENSGT00940000158688.c #21	ENSGT00940000159534.f #22	ENSGT00550000074828.b	ENSGT00390000002517.b	ENSGT00940000153804.B	ENSGT00940000159521	ENSGT00950000183080.a.a.e.b.d.b	ENSGT00940000156107.e.b	ENSGT00940000154281	ENSGT00950000183019.f.b.a	ENSGT00940000157032.c.b	ENSGT00940000181047	ENSGT01020000230394.e.a.a.b.a.a.b.a.a	ENSGT00940000165995	ENSGT00940000157446	ENSGT00990000203541.a.b.b	ENSGT00390000018852
Mexicana tetra	DUPLICATION
Mexicana tetra	MODERN SPECIES	4	MOV10 (ENSAMXG00000016524)	rhoca (ENSAMXG00000044075)	ENSAMXG00000031494	TAFA3 (ENSAMXG00000016508)	slc16a1a (ENSAMXG00000016503)	slc16a1a (ENSAMXG00000016497)	sycp1 (ENSAMXG00000016490)	si:ch211-105j21.9 (ENSAMXG00000030917)	slc5a8l (ENSAMXG00000016480)	tshba (ENSAMXG00000029898)	slc25a55a (ENSAMXG00000035458)	tspan2a (ENSAMXG00000039455)	ngfb (ENSAMXG00000024822)	KCNA3 (ENSAMXG00000024821) #20	KCNA2 (ENSAMXG00000024820) #21	KCNA10 (ENSAMXG00000024819) #22	rplp2 (ENSAMXG00000029412)	rps26l (ENSAMXG00000038013)	fkbp11 (ENSAMXG00000034476)	ERBB3 (ENSAMXG00000016428)	pa2g4a (ENSAMXG00000037224)	ENSAMXG00000043801	prkag1 (ENSAMXG00000032009)	ACVR1B (ENSAMXG00000016390)	ENSAMXG00000031933	ENSAMXG00000016329	si:dkey-19e4.5 (ENSAMXG00000016302)	SETD5 (ENSAMXG00000016290)	LHFPL4 (ENSAMXG00000016281)	MTMR14 (ENSAMXG00000033707)	CPNE9 (ENSAMXG00000016266)
Mexicana tetra	MODERN SPECIES	1087															ENSAMXG00000031450	KCNA10 (ENSAMXG00000030637) #22
Red-bellied piranha	MODERN SPECIES	53	MOV10 (ENSPNAG00000001337)	rhoca (ENSPNAG00000009771)	ENSPNAG00000009761	TAFA3 (ENSPNAG00000009754)	slc16a1a (ENSPNAG00000009743)	slc16a1a (ENSPNAG00000009727)	ENSPNAG00000009714	si:ch211-105j21.9 (ENSPNAG00000009699)	slc5a8l (ENSPNAG00000009659)	tshba (ENSPNAG00000009591)	slc25a55a (ENSPNAG00000009572)	tspan2a (ENSPNAG00000009535)	ngfb (ENSPNAG00000009515)	KCNA3 (ENSPNAG00000009504) #20	KCNA2 (ENSPNAG00000009491) #21	KCNA10 (ENSPNAG00000009480) #22	rplp2 (ENSPNAG00000009462)	rps26l (ENSPNAG00000009452)	ccdc65 (ENSPNAG00000009444)	fkbp11 (ENSPNAG00000009425)	arf3b (ENSPNAG00000009407)	ERBB3 (ENSPNAG00000009388)	pa2g4a (ENSPNAG00000009339)	prkag1 (ENSPNAG00000009322)	ACVR1B (ENSPNAG00000009284)	ENSPNAG00000009250	ENSPNAG00000009218	si:dkey-19e4.5 (ENSPNAG00000009107)	SETD5 (ENSPNAG00000030038)	LHFPL4 (ENSPNAG00000030031)	MTMR14 (ENSPNAG00000030028)
Electric eel	MODERN SPECIES	752												ngfb (ENSEEEG00000014623)	KCNA3 (ENSEEEG00000014622) #20	KCNA2 (ENSEEEG00000014620) #21	ENSEEEG00000014619	KCNA10 (ENSEEEG00000014618) #22
Channel catfish	MODERN SPECIES	2	mov10b.1 (ENSIPUG00000023578)	Rhoa (ENSIPUG00000023572)	ppm1j (ENSIPUG00000023571)	ENSIPUG00000023569	TAFA3 (ENSIPUG00000023567)	slc16a1a (ENSIPUG00000023559)	SLC16A1 (ENSIPUG00000023555)	sycp1 (ENSIPUG00000023547)	slc5a8 (ENSIPUG00000023524)	tshba (ENSIPUG00000023522)	slc25a55a (ENSIPUG00000023512)	tspan2a (ENSIPUG00000023499)	ngf (ENSIPUG00000023495)	KCNA3 (ENSIPUG00000023493) #20	KCNA2 (ENSIPUG00000023485) #21	KCNA10 (ENSIPUG00000023480) #22	rplp2 (ENSIPUG00000023476)	rps26l (ENSIPUG00000023468)	ccdc65 (ENSIPUG00000023458)	Fkbp11 (ENSIPUG00000023445)	arf3b (ENSIPUG00000023431)	ERBB3 (ENSIPUG00000023381)	pa2g4a (ENSIPUG00000023371)	Prkag1 (ENSIPUG00000023346)	ACVR1B (ENSIPUG00000023330)	ccdc65 (ENSIPUG00000023323)	ENSIPUG00000023258	si:dkey-19e4.5 (ENSIPUG00000023250)	setd5 (ENSIPUG00000023237)	LHFPL4 (ENSIPUG00000023235)	mtmr14 (ENSIPUG00000023214)
Cyprinoidei	ANCESTRAL SPECIES	2	ENSGT00950000183119.a.a	ENSGT00940000156024.i.b	ENSGT00950000182945.b.a.a.a.a.b.a	ENSGT00940000166858	ENSGT00940000155644.a.b	ENSGT00940000154955.a	ENSGT00390000003368	ENSGT00970000193609	ENSGT00940000165906	ENSGT00940000158152.a.a	ENSGT00940000164224.a	ENSGT00940000157504.c.b	ENSGT00390000007725.A.b.c	ENSGT00940000160210.d.b #20	ENSGT00940000158688.c #21	ENSGT00940000159534.f #22	ENSGT00550000074828.b	ENSGT00390000002517.b.c.b	ENSGT00950000183066.a.b.a.b	ENSGT00940000157009	ENSGT00940000155769.`b.b	ENSGT01080000257445	ENSGT00640000091492.b	ENSGT01000000214440.B	ENSGT00530000063255.A	ENSGT01060000253505	ENSGT00940000155569.a.a	ENSGT00390000001799	ENSGT00940000156300.k	ENSGT00940000159809	ENSGT00940000167348
Cyprininae	DUPLICATION
Cyprininae	ANCESTRAL SPECIES	9	ENSGT00940000156024.i.b.a	ENSGT00950000182945.b.a.a.a.a.b.a.b	ENSGT00940000166858.e	ENSGT00940000155644.a.b.i.a	ENSGT00940000154955.a.e	ENSGT00390000003368.p	ENSGT00970000193609.d	ENSGT00390000003368.o.a	ENSGT00940000165906.d	ENSGT00940000158152.a.a.b	ENSGT00940000164224.a.l	ENSGT00940000157504.c.b.b	ENSGT00390000007725.A.b.c.a	ENSGT00940000160210.d.b.d.a #20	ENSGT00940000158688.c.a #21	ENSGT00940000159534.f.e #22	ENSGT00550000074828.b.g	ENSGT00950000183066.a.b.a.b.y	ENSGT00940000157009.b	ENSGT01080000257445.a	ENSGT00940000155769.`b.b.a	ENSGT00640000091492.b.d	ENSGT01000000214440.B.j	ENSGT00530000063255.A.h	ENSGT01060000253505	ENSGT00940000155569.a.a.c	ENSGT00390000001799.a	ENSGT00940000156300.k.b	ENSGT00940000159809.n	ENSGT00940000167348.c	ENSGT00940000154663.b.c
Cyprininae_a	ANCESTRAL SPECIES	20	ENSGT00940000156024.i.b.a	ENSGT00950000182945.b.a.a.a.a.a.b	ENSGT00940000166858.e	ENSGT00940000155644.a.b.i.a	ENSGT00940000154955.a.e	ENSGT00390000003368.p	ENSGT00970000193609.d	ENSGT00390000003368.o.a	ENSGT00940000165906.d	ENSGT00940000158152.a.a.b	ENSGT00940000164224.a.l	ENSGT00940000157504.c.b.b	ENSGT00390000007725.A.b.c.a	ENSGT00940000160210.d.b.d.a #20	ENSGT00940000158688.c.a #21	ENSGT00940000159534.f.e #22	ENSGT00550000074828.b.g	ENSGT00390000002517.b.c.b	ENSGT00950000183066.a.b.a.b.y	ENSGT00940000157009.b	ENSGT01080000257445.a	ENSGT00940000155769.`b.b.a	ENSGT00640000091492.b.d	ENSGT01000000214440.B.j	ENSGT00530000063255.A.h.a	ENSGT01060000253505	ENSGT00530000063255.A.h.b	ENSGT00940000155569.a.a.c	ENSGT00390000001799.a	ENSGT00940000156300.k.b	ENSGT00940000159809.n
Golden-line barbel	MODERN SPECIES	222	ENSSGRG00000038699	snrnp25 (ENSSGRG00000038694)	cdip1 (ENSSGRG00000038693)	ENSSGRG00000038691	shisa9b (ENSSGRG00000038690)	slc16a1a (ENSSGRG00000038689)	sycp1 (ENSSGRG00000038688)	si:ch211-105j21.9 (ENSSGRG00000038687)	slc5a8l (ENSSGRG00000038685)	tshba (ENSSGRG00000038684)	slc25a55a (ENSSGRG00000038683)	tspan2a (ENSSGRG00000038681)	ngfb (ENSSGRG00000038679)	ENSSGRG00000038675 #20	KCNA2 (ENSSGRG00000038674) #21	KCNA10 (ENSSGRG00000038672) #22	rplp2 (ENSSGRG00000038658)	rps26l (ENSSGRG00000038651)	ENSSGRG00000037839	rab22a (ENSSGRG00000037811)	vapb (ENSSGRG00000037808)	APCDD1L (ENSSGRG00000037807)	STX16 (ENSSGRG00000037755)	npepl1 (ENSSGRG00000037707)	ctsz (ENSSGRG00000037700)	nelfcd (ENSSGRG00000037638)	GNAS (ENSSGRG00000036572)	tubb1 (ENSSGRG00000036542)	atp5f1e (ENSSGRG00000036541)	chmp4ba (ENSSGRG00000036519)	ahcy (ENSSGRG00000036438) ##33
Common carp reference	MODERN SPECIES	10	st7l (ENSCCRG00000013225)	capza1a (ENSCCRG00000014107)	MOV10 (ENSCCRG00000015515)	ENSCCRG00000029394	ENSCCRG00000033945	TAFA3 (ENSCCRG00000034024)	slc16a1a (ENSCCRG00000005842)	sycp1 (ENSCCRG00000005849)	slc5a8l (ENSCCRG00000005868)	tshba (ENSCCRG00000061522)	slc25a55a (ENSCCRG00000009864)	tspan2a (ENSCCRG00000062607)	ngfb (ENSCCRG00000058351)	KCNA3 (ENSCCRG00000069542) #20	ENSCCRG00000056235 #21	KCNA10 (ENSCCRG00000071833) #22	rplp2 (ENSCCRG00000065765)	rps26l (ENSCCRG00000021750)	ENSCCRG00000021770	rab22a (ENSCCRG00000035199)	ENSCCRG00000081645	vapb (ENSCCRG00000019328)	APCDD1L (ENSCCRG00000061830)	STX16 (ENSCCRG00000047693)	npepl1 (ENSCCRG00000018532)	ENSCCRG00000061980	ctsz (ENSCCRG00000065542)	nelfcd (ENSCCRG00000018541)	GNAS (ENSCCRG00000019359)	tubb1 (ENSCCRG00000061932)	chmp4ba (ENSCCRG00000082352)
Goldfish	MODERN SPECIES	46	st7l (ENSCARG00000015307)	capza1a (ENSCARG00000014706)	MOV10 (ENSCARG00000012980)	rhoca (ENSCARG00000012897)	ENSCARG00000012885	TAFA3 (ENSCARG00000012868)	slc16a1a (ENSCARG00000012845)	sycp1 (ENSCARG00000012827)	slc5a8l (ENSCARG00000012808)	gfTSHbeta (ENSCARG00000012800)	slc25a55a (ENSCARG00000012775)	tspan2a (ENSCARG00000012762)	ngfb (ENSCARG00000012753)	KCNA3 (ENSCARG00000012744) #20	KCNA2 (ENSCARG00000012736) #21	KCNA10 (ENSCARG00000012731) #22	rplp2 (ENSCARG00000012725)	rps26l (ENSCARG00000012720)	ENSCARG00000011777	rab22a (ENSCARG00000011681)	ENSCARG00000046329	vapb (ENSCARG00000046226)	APCDD1L (ENSCARG00000046205)	STX16 (ENSCARG00000046161)	npepl1 (ENSCARG00000045890)	ctsz (ENSCARG00000045847)	nelfcd (ENSCARG00000045759)	tubb1 (ENSCARG00000045741)	atp5f1e (ENSCARG00000045735)	chmp4ba (ENSCARG00000045723)	ahcy (ENSCARG00000044757) ##33
Cyprininae	ANCESTRAL SPECIES	90	ENSGT00950000183119.a.a.a	ENSGT00940000156024.i.b.b	ENSGT00950000182945.b.a.a.a.a.b.a.a	ENSGT00940000166858.f	ENSGT00940000155644.a.b.i.b	ENSGT00940000154955.a.f	ENSGT00390000003368.o.b	ENSGT00970000193609.c	ENSGT00940000165906.c	ENSGT00940000158152.a.a.a	ENSGT00940000164224.a.k	ENSGT00940000157504.c.b.a	ENSGT00390000007725.A.b.c.b	ENSGT00940000160210.d.b.d.b #20	ENSGT00940000158688.c.b #21	ENSGT00940000159534.f.f #22	ENSGT00550000074828.b.h	ENSGT00390000002517.b.c.b	ENSGT00950000183066.a.b.a.b.z	ENSGT00940000157009.a	ENSGT01080000257445.b	ENSGT00940000155769.`b.b.b	ENSGT00640000091492.b.c	ENSGT01000000214440.B.i	ENSGT00530000063255.A.g	ENSGT00940000155569.a.a.d	ENSGT00390000001799.b	ENSGT00940000156300.k.a	ENSGT00940000159809.m	ENSGT00940000167348.d	ENSGT00940000154663.b.d
Cyprininae_a	ANCESTRAL SPECIES	68	ENSGT00390000000873.a.a.b	ENSGT00950000183119.a.a.a	ENSGT00940000156024.i.b.b	ENSGT00950000182945.b.a.a.a.a.b.a.a	ENSGT00940000166858.f	ENSGT00940000155644.a.b.i.b	ENSGT00390000003368.o.b	ENSGT00970000193609.c	ENSGT00940000165906.c	ENSGT00940000158152.a.a.a	ENSGT00940000164224.a.k	ENSGT00940000157504.c.b.a	ENSGT00390000007725.A.b.c.b	ENSGT00940000160210.d.b.d.b #20	ENSGT00940000158688.c.b #21	ENSGT00940000159534.f.f #22	ENSGT00550000074828.b.h	ENSGT00950000183066.a.b.a.b.z	ENSGT00940000157009.a	ENSGT00940000155769.`b.b.b	ENSGT01080000257445.b	ENSGT00640000091492.b.c	ENSGT01000000214440.B.i	ENSGT00530000063255.A.g	ENSGT00940000155569.a.a.d	ENSGT00390000001799.b	ENSGT00940000156300.k.a	ENSGT00940000159809.m	ENSGT00940000167348.d	ENSGT00940000154663.b.d.b	ENSGT00940000167348.c
Golden-line barbel	MODERN SPECIES	492				ENSSGRG00000045174	slc16a1a (ENSSGRG00000045173)	sycp1 (ENSSGRG00000045172)	si:ch211-105j21.9 (ENSSGRG00000045170)	slc5a8l (ENSSGRG00000045169)	tshba (ENSSGRG00000045167)	slc25a55a (ENSSGRG00000045135)	tspan2a (ENSSGRG00000045132)	ngfb (ENSSGRG00000045130)	KCNA3 (ENSSGRG00000045129) #20	ENSSGRG00000045128 #20	KCNA2 (ENSSGRG00000045126) #21	KCNA10 (ENSSGRG00000045125) #22	rps26l (ENSSGRG00000045107)	ENSSGRG00000044566	rab22a (ENSSGRG00000044521)	vapb (ENSSGRG00000044519)	APCDD1L (ENSSGRG00000044510)	STX16 (ENSSGRG00000044500)	npepl1 (ENSSGRG00000044425)	ctsz (ENSSGRG00000044420)	ctsz (ENSSGRG00000044419)	nelfcd (ENSSGRG00000044288)	GNAS (ENSSGRG00000044096)	tubb1 (ENSSGRG00000044091)	atp5f1e (ENSSGRG00000044090)	chmp4ba (ENSSGRG00000044089)	ahcy (ENSSGRG00000043798) ##33
Common carp reference	MODERN SPECIES	16	wnt2ba (ENSCCRG00000065641)	capza1a (ENSCCRG00000080845)	MOV10 (ENSCCRG00000058348)	rhoca (ENSCCRG00000015548)	ENSCCRG00000021737	TAFA3 (ENSCCRG00000038247)	sycp1 (ENSCCRG00000001011)	si:ch211-105j21.9 (ENSCCRG00000009830)	slc5a8l (ENSCCRG00000009844)	tshba (ENSCCRG00000009860)	slc25a55a (ENSCCRG00000005931)	tspan2a (ENSCCRG00000009869)	ngfb (ENSCCRG00000080200)	KCNA3 (ENSCCRG00000079410) #20	ENSCCRG00000054623 #21	KCNA10 (ENSCCRG00000060863) #22	rplp2 (ENSCCRG00000021745)	ENSCCRG00000057011	ENSCCRG00000034817	rab22a (ENSCCRG00000077029)	vapb (ENSCCRG00000022984)	ENSCCRG00000022989	APCDD1L (ENSCCRG00000043058)	STX16 (ENSCCRG00000066207)	npepl1 (ENSCCRG00000023034)	ctsz (ENSCCRG00000018537)	nelfcd (ENSCCRG00000023059)	GNAS (ENSCCRG00000025190)	tubb1 (ENSCCRG00000068457)	chmp4ba (ENSCCRG00000056400)	ahcy (ENSCCRG00000028089) ##33
Goldfish	MODERN SPECIES	24	capza1a (ENSCARG00000033681)	MOV10 (ENSCARG00000033251)	rhoca (ENSCARG00000033226)	ENSCARG00000033155	TAFA3 (ENSCARG00000033135)	slc16a1a (ENSCARG00000033126)	sycp1 (ENSCARG00000033100)	si:ch211-105j21.9 (ENSCARG00000033092)	slc5a8l (ENSCARG00000032975)	tshba (ENSCARG00000032953)	slc25a55a (ENSCARG00000032877)	tspan2a (ENSCARG00000032848)	ngfb (ENSCARG00000032836)	KCNA3 (ENSCARG00000032826) #20	KCNA2 (ENSCARG00000032817) #21	KCNA10 (ENSCARG00000032808) #22	rplp2 (ENSCARG00000032796)	rps26l (ENSCARG00000032787)	ENSCARG00000030431	rab22a (ENSCARG00000030357)	ENSCARG00000030349	vapb (ENSCARG00000030331)	APCDD1L (ENSCARG00000030329)	STX16 (ENSCARG00000030293)	npepl1 (ENSCARG00000030171)	ctsz (ENSCARG00000030152)	nelfcd (ENSCARG00000029655)	GNAS (ENSCARG00000029418)	tubb1 (ENSCARG00000029373)	atp5f1e (ENSCARG00000029362)	chmp4ba (ENSCARG00000029353)
Osteoglossiformes	ANCESTRAL SPECIES	191	ENSGT00940000166225.q	ENSGT00950000183119.a.b	ENSGT00940000156024.i.b	ENSGT00950000182945.b.a.a.a.a.d	ENSGT00940000166858	ENSGT00940000154955.d	ENSGT00390000003368	ENSGT00970000193609.a	ENSGT00940000165906	ENSGT00940000158152.a.a	ENSGT00940000164224.a	ENSGT00940000157504.c.b	ENSGT00390000007725.A.b.c	ENSGT00940000160210.d.b #20	ENSGT00940000158688.b #21	ENSGT00940000159534.f #22	ENSGT00550000074828.b	ENSGT01030000234555.a.a.b.a.b.b	ENSGT01030000234555.a.a.b.a.b.a.e	ENSGT00940000158771	ENSGT00950000182956.b.b.b.e.a	ENSGT00390000009166	ENSGT00940000156735.d	ENSGT00940000154709.a.b.a.b	ENSGT01030000234588.a.b	ENSGT00440000039564.a.a	ENSGT00940000156777.d	ENSGT00940000156637.a	ENSGT00940000158040.a	ENSGT00940000165428.c.a	ENSGT00980000199670
P. kingsleyae	MODERN SPECIES	32						SLC16A1 (ENSPKIG00000004042)	sycp1 (ENSPKIG00000004078)	si:ch211-105j21.9 (ENSPKIG00000004123)	slc5a8l (ENSPKIG00000004158)	tshba (ENSPKIG00000004210)	slc25a55a (ENSPKIG00000004227)	tspan2a (ENSPKIG00000004256)	ngfb (ENSPKIG00000004273)	KCNA3 (ENSPKIG00000004290) #20	KCNA2 (ENSPKIG00000004316) #21	KCNA10 (ENSPKIG00000004325) #22	rplp2 (ENSPKIG00000004338)	LGR6 (ENSPKIG00000004359)	acad9 (ENSPKIG00000004482)	IQSEC1 (ENSPKIG00000004601)	hdac11 (ENSPKIG00000004742)	FBLN2 (ENSPKIG00000004833)	ENSPKIG00000004928	wnt7aa (ENSPKIG00000004946)	ptpdc1a (ENSPKIG00000004965)	barx1 (ENSPKIG00000004996)	phf2 (ENSPKIG00000005052)	FAM120A (ENSPKIG00000005194)	CASS4 (ENSPKIG00000005288)	cstf1 (ENSPKIG00000005323)	ENSPKIG00000005375
Asian bonytongue	MODERN SPECIES	14	capza1b (ENSSFOG00015018870)	MOV10 (ENSSFOG00015018816)	ENSSFOG00015018788	ENSSFOG00015018762	TAFA3 (ENSSFOG00015018739)	SLC16A1 (ENSSFOG00015003058)	ENSSFOG00015003072	si:ch211-105j21.9 (ENSSFOG00015003092)	slc5a8l (ENSSFOG00015003123)	tshba (ENSSFOG00015003174)	slc25a55a (ENSSFOG00015003195)	tspan2a (ENSSFOG00015024272)	ngfb (ENSSFOG00015003247)	KCNA3 (ENSSFOG00015003265) #20	KCNA2 (ENSSFOG00015003282) #21	KCNA10 (ENSSFOG00015026968) #22	rplp2 (ENSSFOG00015030781)	LGR6 (ENSSFOG00015003341)	ENSSFOG00015004216	ENSSFOG00015003503	ENSSFOG00015003530	tead3b (ENSSFOG00015003578)	ENSSFOG00015003721	taf11 (ENSSFOG00015003828)	ANKS1A (ENSSFOG00015003844)	ENSSFOG00015003893	scube3 (ENSSFOG00015003906)	ENSSFOG00015025680	ENSSFOG00015027900	yod1 (ENSSFOG00015029211)	PFKFB2 (ENSSFOG00015004082)
Spotted gar	MODERN SPECIES	669	ENSLOCG00000010741	adora1b (ENSLOCG00000010733)	myog (ENSLOCG00000010722)	ppfia4 (ENSLOCG00000010689)	tmem183a (ENSLOCG00000010682)	ENSLOCG00000010674	ENSLOCG00000010670	ENSLOCG00000010662	slc5a8l (ENSLOCG00000010641)	tshba (ENSLOCG00000010628)	slc25a55b (ENSLOCG00000010612)	tspan2a (ENSLOCG00000010592)	ngfb (ENSLOCG00000017923)	KCNA3 (ENSLOCG00000017921) #20	kcna2b (ENSLOCG00000018069) #21	KCNA10 (ENSLOCG00000018067) #22	ENSLOCG00000018065	ENSLOCG00000010576	rplp2 (ENSLOCG00000010566)	etv7 (ENSLOCG00000010545)	zgc:194242 (ENSLOCG00000010534)	zgc:194242 (ENSLOCG00000010529)	HIPK1 (ENSLOCG00000010511)	olfml3a (ENSLOCG00000010503)	SYT6 (ENSLOCG00000010494)	trim33 (ENSLOCG00000010479)	bcas2 (ENSLOCG00000010471)	DENND2C (ENSLOCG00000010452) ##15	ampd1 (ENSLOCG00000010444)	nras (ENSLOCG00000010440)	ENSLOCG00000010433
Reedfish	MODERN SPECIES	11	ENSECRG00000006683	ENSECRG00000006689	ENSECRG00000006704	ENSECRG00000006720	slc5a8l (ENSECRG00000006732)	tshba (ENSECRG00000006790)	slc25a55b (ENSECRG00000006959)	tspan2a (ENSECRG00000006967)	ENSECRG00000006981	ENSECRG00000006983	ngfb (ENSECRG00000006989)	KCNA3 (ENSECRG00000006996) #20	KCNA3 (ENSECRG00000007003) #20	ENSECRG00000007009	kcna2b (ENSECRG00000007016) #21	KCNA10 (ENSECRG00000007024) #22	ENSECRG00000007031	ENSECRG00000007040	rplp2 (ENSECRG00000007052)	mrps26 (ENSECRG00000007061)	ENSECRG00000007068	zgc:194242 (ENSECRG00000007078)	zgc:194242 (ENSECRG00000007085)	zgc:194242 (ENSECRG00000007090)	zgc:194242 (ENSECRG00000007095)	ube2t (ENSECRG00000007106)	LGR6 (ENSECRG00000007117)	ENSECRG00000007168	ENSECRG00000012284	ENSECRG00000012315	ENSECRG00000012344