Rodentia	ANCESTRAL SPECIES		ENSGT00950000185149	ENSGT00390000011644 #8	ENSGT00440000039028 #9	ENSGT00940000162904 #10	ENSGT00940000160836.d #11	ENSGT00390000018059.b #12	ENSGT01020000230412.A.c.b.d #13	ENSGT00390000002659 #14	ENSGT00940000162687 #15	ENSGT00390000008608 #16	ENSGT00940000156906 #17	ENSGT00940000161269 #18	ENSGT00940000157774 #19	ENSGT00940000154374.b #20	ENSGT00390000004199 #21	ENSGT00940000157380 #22	ENSGT00940000159036	ENSGT00390000014067	ENSGT00390000013340	ENSGT00940000154842.a.b	ENSGT00940000153464.A.b	ENSGT00940000157769	ENSGT00940000164616	ENSGT00900000143287	ENSGT00940000163577	ENSGT00510000046975.b.t	ENSGT00390000007598	ENSGT00510000046975.b.u	ENSGT00940000157757	ENSGT00940000159221	ENSGT00930000151041
Rodentia_A	ANCESTRAL SPECIES		ENSGT00390000011644 #8	ENSGT00440000039028 #9	ENSGT00940000162904 #10	ENSGT00940000160836.d #11	ENSGT00390000018059.b #12	ENSGT01020000230412.A.c.b.d #13	ENSGT00390000002659 #14	ENSGT00940000163309	ENSGT00940000162687 #15	ENSGT00390000008608 #16	ENSGT00940000156906 #17	ENSGT00940000161269 #18	ENSGT00940000157774 #19	ENSGT00940000154374.b #20	ENSGT00390000004199 #21	ENSGT00940000157380 #22	ENSGT00940000159036	ENSGT00390000014067	ENSGT00390000013340	ENSGT00940000154842.a.b	ENSGT00940000153464.A.b	ENSGT00940000157769	ENSGT00940000163577	ENSGT00510000046975.b.t	ENSGT00390000007598	ENSGT00510000046975.b.u	ENSGT00940000157757	ENSGT00940000159221	ENSGT00930000151041	ENSGT00860000135883	ENSGT01050000244808.D.fb.a
Sciuridae	ANCESTRAL SPECIES		ENSGT00950000183058.A.a #7	ENSGT00390000011644 #8	ENSGT00440000039028 #9	ENSGT00940000162904 #10	ENSGT00940000160836.d #11	ENSGT00390000018059.b #12	ENSGT01020000230412.A.c.b.d #13	ENSGT00390000002659 #14	ENSGT00940000162687 #15	ENSGT00390000008608 #16	ENSGT00940000156906 #17	ENSGT00940000161269 #18	ENSGT00940000157774 #19	ENSGT00940000154374.b #20	ENSGT00390000004199 #21	ENSGT00940000157380 #22	ENSGT00940000159036	ENSGT00390000013340	ENSGT00940000154842.a.b	ENSGT00940000153464.A.b	ENSGT00940000157769	ENSGT00940000163577	ENSGT00940000164616	ENSGT00510000046975.b.t	ENSGT00390000007598	ENSGT00510000046975.b.u	ENSGT00940000157757	ENSGT00940000159221	ENSGT00930000151041	ENSGT00860000135883	ENSGT01050000244808.D.fb.a
Marmotini	ANCESTRAL SPECIES	34	ENSGT00950000183058.A.a #7	ENSGT00390000011644 #8	ENSGT00440000039028 #9	ENSGT00940000162904 #10	ENSGT00940000160836.d #11	ENSGT00390000018059.b #12	ENSGT01020000230412.A.c.b.d #13	ENSGT00390000002659 #14	ENSGT00940000162687 #15	ENSGT00390000008608 #16	ENSGT00940000156906 #17	ENSGT00940000161269 #18	ENSGT00940000157774 #19	ENSGT00940000154374.b #20	ENSGT00390000004199 #21	ENSGT00940000157380 #22	ENSGT00940000159036	ENSGT00390000013340	ENSGT00940000154842.a.b	ENSGT00940000153464.A.b	ENSGT00940000157769	ENSGT00510000046975.b.t	ENSGT00390000007598	ENSGT00510000046975.b.u	ENSGT00940000157757	ENSGT00940000159221	ENSGT00930000151041	ENSGT00860000135883	ENSGT01050000244808.D.fb.a	ENSGT01050000244808.A.b.a.a.b	ENSGT01050000244808.A.b.a.a.a.a.tb
Marmotini_b	ANCESTRAL SPECIES	28	ENSGT00950000183058.A.a #7	ENSGT00390000011644 #8	ENSGT00440000039028 #9	ENSGT00940000162904 #10	ENSGT00940000160836.d #11	ENSGT00390000018059.b #12	ENSGT01020000230412.A.c.b.d #13	ENSGT00390000002659 #14	ENSGT00940000162687 #15	ENSGT00390000008608 #16	ENSGT00940000156906 #17	ENSGT00940000161269 #18	ENSGT00940000157774 #19	ENSGT00940000154374.b #20	ENSGT00390000004199 #21	ENSGT00940000157380 #22	ENSGT00940000159036
Squirrel	MODERN SPECIES	81	ILDR2 (ENSSTOG00000015430) #7	TADA1 (ENSSTOG00000006199) #8	POGK (ENSSTOG00000025009) #9	ENSSTOG00000025310 #10	ENSSTOG00000001862 #11	FAM78B (ENSSTOG00000011769) #12	UCK2 (ENSSTOG00000027307) #13	TMCO1 (ENSSTOG00000008110) #14	ENSSTOG00000022883 #15	MGST3 (ENSSTOG00000020274) #16	LRRC52 (ENSSTOG00000011480) #17	RXRG (ENSSTOG00000010239) #18	LMX1A (ENSSTOG00000005189) #19	PBX1 (ENSSTOG00000011504) #20	NUF2 (ENSSTOG00000004673) #21	RGS5 (ENSSTOG00000028740) #22
Arctic ground squirrel	MODERN SPECIES	813															NUF2 (ENSUPAG00010010131) #21	RGS5 (ENSUPAG00010010151) #22	RGS4 (ENSUPAG00010010159)
Alpin marmot	MODERN SPECIES	29	TADA1 (ENSMMMG00000020592) #8	POGK (ENSMMMG00000020598) #9	ENSMMMG00000020613 #10	ENSMMMG00000020622 #11	FAM78B (ENSMMMG00000020648) #12	UCK2 (ENSMMMG00000020655) #13	ENSMMMG00000020677	TMCO1 (ENSMMMG00000020681) #14	ENSMMMG00000020694 #15	MGST3 (ENSMMMG00000021590) #16	LRRC52 (ENSMMMG00000021599) #17	RXRG (ENSMMMG00000021608) #18	LMX1A (ENSMMMG00000021633) #19	PBX1 (ENSMMMG00000021655) #20	NUF2 (ENSMMMG00000021710) #21	RGS5 (ENSMMMG00000021737) #22	RGS4 (ENSMMMG00000021742)	HSD17B7 (ENSMMMG00000021761)	DDR2 (ENSMMMG00000021769)	UAP1 (ENSMMMG00000021814)	UHMK1 (ENSMMMG00000021840)	ENSMMMG00000021868	SH2D1B (ENSMMMG00000021878)	ENSMMMG00000021881	SPATA46 (ENSMMMG00000021885)	NOS1AP (ENSMMMG00000021891)	ENSMMMG00000021908	OLFML2B (ENSMMMG00000021911)	ATF6 (ENSMMMG00000021922)	ENSMMMG00000021932	FCRLB (ENSMMMG00000021937)
Eurasian red squirrel	MODERN SPECIES	3	POGK (ENSSVLG00005008055) #9	ENSSVLG00005008109 #10	ENSSVLG00005008356 #10	ENSSVLG00005008667 #11	ENSSVLG00005008771 #11	FAM78B (ENSSVLG00005008813) #12	UCK2 (ENSSVLG00005008846) #13	TMCO1 (ENSSVLG00005008920) #14	ENSSVLG00005008971 #15	MGST3 (ENSSVLG00005009056) #16	LRRC52 (ENSSVLG00005009106) #17	RXRG (ENSSVLG00005009146) #18	LMX1A (ENSSVLG00005009240) #19	PBX1 (ENSSVLG00005009317) #20	NUF2 (ENSSVLG00005009415) #21	RGS5 (ENSSVLG00005009575) #22	ENSSVLG00005009645	ENSSVLG00005009700
Hystricomorpha	ANCESTRAL SPECIES	2	ENSGT00390000011644 #8	ENSGT00440000039028 #9	ENSGT00940000162904.k #10	ENSGT00940000162904.l #10	ENSGT00940000160836.d #11	ENSGT00390000018059.b #12	ENSGT01020000230412.A.c.b.d #13	ENSGT00390000002659 #14	ENSGT00940000163309	ENSGT00390000008608 #16	ENSGT00940000156906 #17	ENSGT00940000161269 #18	ENSGT00940000157774 #19	ENSGT00940000154374.b #20	ENSGT00390000004199 #21	ENSGT00940000157380 #22	ENSGT00940000159036	ENSGT00390000014067	ENSGT00390000013340	ENSGT00940000154842.a.b	ENSGT00940000153464.A.b	ENSGT00940000157769	ENSGT00940000163577	ENSGT00510000046975.b.t	ENSGT00390000007598	ENSGT00510000046975.b.u	ENSGT00940000157757	ENSGT00940000159221	ENSGT00930000151041	ENSGT00860000135883	ENSGT01050000244808.D.fb.a
Naked mole-rat female	MODERN SPECIES	20	TADA1 (ENSHGLG00000015074) #8	POGK (ENSHGLG00000011531) #9	ENSHGLG00000001797 #10	ENSHGLG00000001336	FAM78B (ENSHGLG00000007090) #12	UCK2 (ENSHGLG00000049531) #13	ENSHGLG00000031882	ENSHGLG00000004945 #14	ALDH9A1 (ENSHGLG00000004082)	MGST3 (ENSHGLG00000003866) #16	RXRG (ENSHGLG00000003380) #18	LRRC52 (ENSHGLG00000003658) #17	LMX1A (ENSHGLG00000003212) #19	PBX1 (ENSHGLG00000004849) #20	NUF2 (ENSHGLG00000003907) #21	Rgs5 (ENSHGLG00000042926) #22	ENSHGLG00000032628	ENSHGLG00000035946	RGS4 (ENSHGLG00000044423)	HSD17B7 (ENSHGLG00000009322)	DDR2 (ENSHGLG00000007636)	ENSHGLG00000013192	ENSHGLG00000004032	ENSHGLG00000003369	SPATA46 (ENSHGLG00000032913)	OLFML2B (ENSHGLG00000002985)	ATF6 (ENSHGLG00000019506)	ENSHGLG00000019948	DUSP12 (ENSHGLG00000038411)	FCRLB (ENSHGLG00000019604)	FCRLA (ENSHGLG00000019609)
Hystricomorpha_a	ANCESTRAL SPECIES	11	ENSGT00390000011644 #8	ENSGT00440000039028 #9	ENSGT00940000162904.k #10	ENSGT00940000162904.l #10	ENSGT00940000160836.d #11	ENSGT00390000018059.b #12	ENSGT01020000230412.A.c.b.d #13	ENSGT00390000002659 #14	ENSGT00940000163309	ENSGT00390000008608 #16	ENSGT00940000156906 #17	ENSGT00940000161269 #18	ENSGT00940000157774 #19	ENSGT00940000154374.b #20	ENSGT00390000004199 #21	ENSGT00940000157380 #22	ENSGT00940000159036	ENSGT00390000014067	ENSGT00390000013340	ENSGT00940000154842.a.b	ENSGT00940000153464.A.b	ENSGT00940000157769	ENSGT00940000163577	ENSGT00510000046975.b.t	ENSGT00390000007598	ENSGT00510000046975.b.u	ENSGT00940000157757	ENSGT00940000159221	ENSGT00930000151041	ENSGT00860000135883	ENSGT01050000244808.D.fb.a
Guinea pig	MODERN SPECIES	39	ENSCPOG00000022892 #10	ENSCPOG00000026225 #10	ENSCPOG00000005192 #11	FAM78B (ENSCPOG00000007868) #12	UCK2 (ENSCPOG00000032384) #13	TMCO1 (ENSCPOG00000013728) #14	ALDH9A1 (ENSCPOG00000015347)	MGST3 (ENSCPOG00000015346) #16	LRRC52 (ENSCPOG00000015344) #17	RXRG (ENSCPOG00000015343) #18	LMX1A (ENSCPOG00000025320) #19	ENSCPOG00000038291	PBX1 (ENSCPOG00000005958) #20	NUF2 (ENSCPOG00000015019) #21	ENSCPOG00000039704	RGS5 (ENSCPOG00000033467) #22	RGS4 (ENSCPOG00000031194)	CCDC190 (ENSCPOG00000038251)	HSD17B7 (ENSCPOG00000030957)	DDR2 (ENSCPOG00000009721)	UAP1 (ENSCPOG00000004568)	UHMK1 (ENSCPOG00000004561)
Hystricomorpha_b	ANCESTRAL SPECIES	8	ENSGT00440000039028 #9	ENSGT00940000162904.k #10	ENSGT00940000162904.l #10	ENSGT00940000160836.d #11	ENSGT00390000018059.b #12	ENSGT01020000230412.A.c.b.d #13	ENSGT00390000002659 #14	ENSGT00940000163309	ENSGT00940000162687 #15	ENSGT00390000008608 #16	ENSGT00940000156906 #17	ENSGT00940000161269 #18	ENSGT00940000157774 #19	ENSGT00940000154374.b #20	ENSGT00390000004199 #21	ENSGT00940000157380 #22	ENSGT00940000159036	ENSGT00390000014067	ENSGT00390000013340	ENSGT00940000154842.a.b	ENSGT00940000153464.A.b	ENSGT00940000157769	ENSGT00940000163577	ENSGT00510000046975.b.t	ENSGT00390000007598	ENSGT00510000046975.b.u	ENSGT00940000157757	ENSGT00940000159221	ENSGT00930000151041	ENSGT01050000244808.D.fb.a	ENSGT01050000244808.A.b.a.a.b
Long-tailed chinchilla	MODERN SPECIES	169	ENSCLAG00000008737	TADA1 (ENSCLAG00000009819) #8	POGK (ENSCLAG00000004943) #9	ENSCLAG00000008264 #10	FAM78B (ENSCLAG00000009778) #12	UCK2 (ENSCLAG00000010692) #13	ENSCLAG00000004400	TMCO1 (ENSCLAG00000004923) #14	ENSCLAG00000006096 #15	MGST3 (ENSCLAG00000007690) #16	LRRC52 (ENSCLAG00000006632) #17	RXRG (ENSCLAG00000007511) #18	LMX1A (ENSCLAG00000006865) #19	PBX1 (ENSCLAG00000009776) #20	NUF2 (ENSCLAG00000009748) #21	RGS5 (ENSCLAG00000006523) #22	RGS4 (ENSCLAG00000009055)	CCDC190 (ENSCLAG00000006720)	HSD17B7 (ENSCLAG00000005057)	DDR2 (ENSCLAG00000008308)	UAP1 (ENSCLAG00000007532)	ENSCLAG00000004715	SH2D1B (ENSCLAG00000005824)	ENSCLAG00000016599	SPATA46 (ENSCLAG00000006220)	OLFML2B (ENSCLAG00000012343)	ATF6 (ENSCLAG00000012192)	DUSP12 (ENSCLAG00000010307)	FCRLB (ENSCLAG00000006704)	FCRLA (ENSCLAG00000004447)	ENSCLAG00000006167
Degu	MODERN SPECIES	157		ENSODEG00000019271	FAM78B (ENSODEG00000006543) #12	ENSODEG00000006713	ENSODEG00000019347	UCK2 (ENSODEG00000005895) #13	ENSODEG00000019301	TMCO1 (ENSODEG00000006261) #14	ALDH9A1 (ENSODEG00000006714)	MGST3 (ENSODEG00000008534) #16	LRRC52 (ENSODEG00000007590) #17	RXRG (ENSODEG00000007429) #18	LMX1A (ENSODEG00000006784) #19	PBX1 (ENSODEG00000008268) #20	NUF2 (ENSODEG00000006206) #21	RGS5 (ENSODEG00000006436) #22	RGS4 (ENSODEG00000007399)	ENSODEG00000006225	CCDC190 (ENSODEG00000007128)	HSD17B7 (ENSODEG00000007036)	DDR2 (ENSODEG00000005987)	ENSODEG00000006001	ENSODEG00000006482	ENSODEG00000007230	UHMK1 (ENSODEG00000006380)	ENSODEG00000006566	ENSODEG00000006619	ENSODEG00000007269	C1orf226 (ENSODEG00000007727)	SPATA46 (ENSODEG00000007496)	NOS1AP (ENSODEG00000009278)
Rodentia_B	ANCESTRAL SPECIES		ENSGT00950000185149	ENSGT00390000011644 #8	ENSGT00440000039028 #9	ENSGT00940000162904 #10	ENSGT00940000160836.d #11	ENSGT00390000018059.b #12	ENSGT01020000230412.A.c.b.d #13	ENSGT00390000002659 #14	ENSGT00940000162687 #15	ENSGT00390000008608 #16	ENSGT00940000156906 #17	ENSGT00940000161269 #18	ENSGT00940000157774 #19	ENSGT00940000154374.b #20	ENSGT00390000004199 #21	ENSGT00940000157380 #22	ENSGT00940000159036	ENSGT00390000014067	ENSGT00390000013340	ENSGT00940000154842.a.b	ENSGT00940000153464.A.b	ENSGT00940000157769	ENSGT00900000143287	ENSGT00940000163577	ENSGT00940000164616	ENSGT00940000165337	ENSGT00510000046975.b.t	ENSGT00390000007598	ENSGT00510000046975.b.u	ENSGT00940000157757	ENSGT00940000159221
Kangaroo rat	MODERN SPECIES	376	Tada1 (ENSDORG00000006823) #8	ENSDORG00000006822 #9	ENSDORG00000027955 #10	ENSDORG00000027210 #10	Fmo9 (ENSDORG00000028508) #11	Fam78b (ENSDORG00000026622) #12	Uck2 (ENSDORG00000024295) #13	Tmco1 (ENSDORG00000024383) #14	Aldh9a1 (ENSDORG00000012670) #15	Mgst3 (ENSDORG00000005319) #16	Lrrc52 (ENSDORG00000013852) #17	Rxrg (ENSDORG00000014034) #18	Lmx1a (ENSDORG00000014036) #19	Pbx1 (ENSDORG00000012241) #20	Nuf2 (ENSDORG00000010505) #21	Rgs5 (ENSDORG00000025285) #22	Rgs4 (ENSDORG00000008241)	Ccdc190 (ENSDORG00000004973)	Hsd17b7 (ENSDORG00000004971)	Ddr2 (ENSDORG00000004970)	Uap1 (ENSDORG00000005510)	Uhmk1 (ENSDORG00000011233)	ENSDORG00000000004	1700025G04Rik (ENSDORG00000028610)	Edem3 (ENSDORG00000015760)	ENSDORG00000013136	Rnf2 (ENSDORG00000003231)	Trmt1l (ENSDORG00000003298)	Swt1 (ENSDORG00000010531)	Ivns1abp (ENSDORG00000010533)	Hmcn1 (ENSDORG00000000927)
Myomorpha	ANCESTRAL SPECIES	16	ENSGT00950000185149	ENSGT00390000011644 #8	ENSGT00440000039028 #9	ENSGT00940000162904 #10	ENSGT00940000160836.d #11	ENSGT00390000018059.b #12	ENSGT01020000230412.A.c.b.d #13	ENSGT00390000002659 #14	ENSGT00940000162687 #15	ENSGT00390000008608 #16	ENSGT00940000156906 #17	ENSGT00940000161269 #18	ENSGT00940000157774 #19	ENSGT00940000154374.b #20	ENSGT00390000004199 #21	ENSGT00940000157380 #22	ENSGT00940000159036	ENSGT00390000014067	ENSGT00390000013340	ENSGT00940000154842.a.b	ENSGT00940000153464.A.b	ENSGT00940000157769	ENSGT00940000164616	ENSGT00900000143287	ENSGT00940000163577	ENSGT00510000046975.b.t	ENSGT00390000007598	ENSGT00510000046975.b.u	ENSGT00940000157757	ENSGT00940000159221	ENSGT00930000151041
Lesser Egyptian jerboa	MODERN SPECIES	99	Epha3 (ENSJJAG00000023086)	ENSJJAG00000022581	ENSJJAG00000016108	ENSJJAG00000015343	Zfp654 (ENSJJAG00000014040)	Htr1f (ENSJJAG00000013994)	Pou1f1 (ENSJJAG00000011761)	Chmp2b (ENSJJAG00000010165)	Vgll3 (ENSJJAG00000008774)	ENSJJAG00000001124	ENSJJAG00000011025	Cadm2 (ENSJJAG00000001556)	ENSJJAG00000018522	ENSJJAG00000017273	Nuf2 (ENSJJAG00000015135) #21	Rgs5 (ENSJJAG00000015242) #22	Rgs4 (ENSJJAG00000014256)	Ccdc190 (ENSJJAG00000013635)	Hsd17b7 (ENSJJAG00000012148)	Ddr2 (ENSJJAG00000010116)	Uap1 (ENSJJAG00000021659)	ENSJJAG00000017644	Uhmk1 (ENSJJAG00000015993)	ENSJJAG00000014680	Spata46 (ENSJJAG00000014177)	Nos1ap (ENSJJAG00000011196)	Olfml2b (ENSJJAG00000006072)	ENSJJAG00000001331	Atf6 (ENSJJAG00000020891)	ENSJJAG00000019034	Fcrlb (ENSJJAG00000017591)
Muroidea	ANCESTRAL SPECIES	9	ENSGT00390000011644 #8	ENSGT00440000039028 #9	ENSGT00940000162904.c #10	ENSGT00940000162904.d #10	ENSGT00940000160836.d #11	ENSGT00390000018059.b #12	ENSGT01020000230412.A.c.b.d #13	ENSGT00390000002659 #14	ENSGT00940000162687 #15	ENSGT00390000008608 #16	ENSGT00940000156906 #17	ENSGT00940000161269 #18	ENSGT00940000157774 #19	ENSGT00940000154374.b #20	ENSGT00390000004199 #21	ENSGT00940000157380 #22	ENSGT00940000159036	ENSGT00390000014067	ENSGT00390000013340	ENSGT00940000154842.a.b	ENSGT00940000153464.A.b	ENSGT00940000157769	ENSGT00940000164616	ENSGT00900000143287	ENSGT00940000163577	ENSGT00510000046975.b.t	ENSGT00390000007598	ENSGT00510000046975.b.u	ENSGT00940000157757	ENSGT00940000159221	ENSGT00930000151041
Upper Galilee mountains blind mole rat	MODERN SPECIES	1427	Tada1 (ENSNGAG00000014924) #8	Pogk (ENSNGAG00000008037) #9	Gm4846 (ENSNGAG00000020962) #10	Gm4847 (ENSNGAG00000022387) #10	Fmo9 (ENSNGAG00000022673) #11	Fam78b (ENSNGAG00000010631) #12	Uck2 (ENSNGAG00000007874) #13	Tmco1 (ENSNGAG00000011588) #14	ENSNGAG00000009537 #15	Mgst3 (ENSNGAG00000014946) #16	Lrrc52 (ENSNGAG00000023809) #17	Rxrg (ENSNGAG00000017760) #18	Lmx1a (ENSNGAG00000021747) #19	Pbx1 (ENSNGAG00000017311) #20	Nuf2 (ENSNGAG00000001940) #21	Rgs5 (ENSNGAG00000021650) #22	Rgs4 (ENSNGAG00000023435)
Muroidea_A	ANCESTRAL SPECIES	12	ENSGT00390000011644 #8	ENSGT00440000039028 #9	ENSGT00940000162904.c #10	ENSGT00940000162904.d #10	ENSGT00940000160836.d #11	ENSGT00390000018059.b #12	ENSGT01020000230412.A.c.b.d #13	ENSGT00390000002659 #14	ENSGT00940000162687 #15	ENSGT00390000008608 #16	ENSGT00940000156906 #17	ENSGT00940000161269 #18	ENSGT00940000157774 #19	ENSGT00940000154374.b #20	ENSGT00390000004199 #21	ENSGT00940000157380 #22	ENSGT00940000159036	ENSGT00390000014067	ENSGT00390000013340	ENSGT00940000154842.a.b	ENSGT00940000153464.A.b	ENSGT00940000157769	ENSGT00940000164616	ENSGT00900000143287	ENSGT00940000163577	ENSGT00510000046975.b.t	ENSGT00390000007598	ENSGT00510000046975.b.u	ENSGT00940000157757	ENSGT00940000159221	ENSGT00930000151041
Cricetidae	ANCESTRAL SPECIES	13	ENSGT00390000011644 #8	ENSGT00440000039028 #9	ENSGT00940000162904.c #10	ENSGT00940000162904.d #10	ENSGT00940000160836.d #11	ENSGT00390000018059.b #12	ENSGT01020000230412.A.c.b.d #13	ENSGT00390000002659 #14	ENSGT00940000162687 #15	ENSGT00390000008608 #16	ENSGT00940000156906 #17	ENSGT00940000161269 #18	ENSGT00940000157774 #19	ENSGT00940000154374.b #20	ENSGT00390000004199 #21	ENSGT00940000157380 #22	ENSGT00940000159036	ENSGT00390000014067	ENSGT00390000013340	ENSGT00940000154842.a.b	ENSGT00940000153464.A.b	ENSGT00940000157769	ENSGT00940000164616	ENSGT00940000165337	ENSGT00510000046975.b.t	ENSGT00390000007598	ENSGT00510000046975.b.u	ENSGT00940000157757	ENSGT00940000159221	ENSGT00930000151041	ENSGT00860000135883
Cricetinae	ANCESTRAL SPECIES	4	ENSGT00950000183058.A.a #7	ENSGT00390000011644 #8	ENSGT00440000039028 #9	ENSGT00940000162904.d #10	ENSGT00940000160836.d #11	ENSGT00390000018059.b #12	ENSGT01020000230412.A.c.b.d #13	ENSGT00390000002659 #14	ENSGT00940000162687 #15	ENSGT00390000008608 #16	ENSGT00940000156906 #17	ENSGT00940000161269 #18	ENSGT00940000157774 #19	ENSGT00940000154374.b #20	ENSGT00390000004199 #21	ENSGT00940000157380 #22	ENSGT00940000159036	ENSGT00390000014067	ENSGT00390000013340	ENSGT00940000154842.a.b	ENSGT00940000153464.A.b	ENSGT00940000157769	ENSGT00900000143287	ENSGT00940000165337	ENSGT00390000007598	ENSGT00510000046975.b.u	ENSGT00510000046975.b.t	ENSGT00940000157757	ENSGT00940000159221	ENSGT00860000135883	ENSGT00930000151041
Golden Hamster	MODERN SPECIES	644	Tada1 (ENSMAUG00000006788) #8	Pogk (ENSMAUG00000015441) #9	Gm4847 (ENSMAUG00000013180) #10	Fmo9 (ENSMAUG00000010673) #11	Fam78b (ENSMAUG00000013378) #12	Uck2 (ENSMAUG00000005491) #13	ENSMAUG00000011674	Tmco1 (ENSMAUG00000014853) #14	Aldh9a1 (ENSMAUG00000021995) #15	Mgst3 (ENSMAUG00000022162) #16	Lrrc52 (ENSMAUG00000022044) #17	Rxrg (ENSMAUG00000019514) #18	Lmx1a (ENSMAUG00000018894) #19	Pbx1 (ENSMAUG00000019850) #20	Nuf2 (ENSMAUG00000020433) #21	Rgs5 (ENSMAUG00000021837) #22	Rgs4 (ENSMAUG00000018633)	Ccdc190 (ENSMAUG00000021696)	Hsd17b7 (ENSMAUG00000021760)	Ddr2 (ENSMAUG00000001189)	Uap1 (ENSMAUG00000001545)	Uhmk1 (ENSMAUG00000001735)	ENSMAUG00000022031	ENSMAUG00000000846	ENSMAUG00000012815	Spata46 (ENSMAUG00000001643)	Nos1ap (ENSMAUG00000013773)	ENSMAUG00000009919	Olfml2b (ENSMAUG00000009203)	Atf6 (ENSMAUG00000011288)	Dusp12 (ENSMAUG00000010755)
Chinese hamster chok1gshd	MODERN SPECIES	2	Tada1 (ENSCGRG00001019593) #8	Pogk (ENSCGRG00001017526) #9	Gm4847 (ENSCGRG00001024799) #10	Fmo9 (ENSCGRG00001017191) #11	Fam78b (ENSCGRG00001019514) #12	ENSCGRG00001016705	Uck2 (ENSCGRG00001005584) #13	Tmco1 (ENSCGRG00001024372) #14	Aldh9a1 (ENSCGRG00001023734) #15	Mgst3 (ENSCGRG00001016115) #16	Lrrc52 (ENSCGRG00001014921) #17	Rxrg (ENSCGRG00001019006) #18	Lmx1a (ENSCGRG00001014704) #19	Pbx1 (ENSCGRG00001022276) #20	Nuf2 (ENSCGRG00001014967) #21	Rgs5 (ENSCGRG00001009987) #22	Rgs4 (ENSCGRG00001021878)	Ccdc190 (ENSCGRG00001017352)	Hsd17b7 (ENSCGRG00001012734)	Ddr2 (ENSCGRG00001010683)	Uap1 (ENSCGRG00001022983)	Uhmk1 (ENSCGRG00001013226)	ENSCGRG00001004035	Spata46 (ENSCGRG00001001942)	ENSCGRG00001002529	Olfml2b (ENSCGRG00001022621)	Atf6 (ENSCGRG00001005537)	Gm26620 (ENSCGRG00001002561)	Dusp12 (ENSCGRG00001013172)	Fcrlb (ENSCGRG00001012268)	Fcrla (ENSCGRG00001007910)
Cricetidae_B	ANCESTRAL SPECIES	8	ENSGT00390000011644 #8	ENSGT00440000039028 #9	ENSGT00940000162904.c #10	ENSGT00940000162904.d #10	ENSGT00940000160836.d #11	ENSGT00390000018059.b #12	ENSGT01020000230412.A.c.b.d #13	ENSGT00390000002659 #14	ENSGT00940000162687 #15	ENSGT00390000008608 #16	ENSGT00940000156906 #17	ENSGT00940000161269 #18	ENSGT00940000157774 #19	ENSGT00940000154374.b #20	ENSGT00390000004199 #21	ENSGT00940000157380 #22	ENSGT00940000159036	ENSGT00390000014067	ENSGT00390000013340	ENSGT00940000154842.a.b	ENSGT00940000153464.A.b	ENSGT00940000157769	ENSGT00940000164616	ENSGT00510000046975.b.t	ENSGT00390000007598	ENSGT00510000046975.b.u	ENSGT00940000157757	ENSGT00940000159221	ENSGT00930000151041	ENSGT00860000135883	ENSGT01050000244808.D.fb.a
Northern American deer mouse	MODERN SPECIES	2	Pogk (ENSPEMG00000016935) #9	Gm4846 (ENSPEMG00000014518) #10	Gm4847 (ENSPEMG00000001986) #10	Fmo9 (ENSPEMG00000012442) #11	Fam78b (ENSPEMG00000027973) #12	Uck2 (ENSPEMG00000011469) #13	Tmco1 (ENSPEMG00000008521) #14	Aldh9a1 (ENSPEMG00000007235) #15	Mgst3 (ENSPEMG00000012628) #16	Lrrc52 (ENSPEMG00000025049) #17	Rxrg (ENSPEMG00000013249) #18	Lmx1a (ENSPEMG00000016259) #19	Pbx1 (ENSPEMG00000009084) #20	ENSPEMG00000019682	Nuf2 (ENSPEMG00000023899) #21	Rgs5 (ENSPEMG00000025824) #22	Rgs4 (ENSPEMG00000031119)	Ccdc190 (ENSPEMG00000023644)	Hsd17b7 (ENSPEMG00000022786)	Ddr2 (ENSPEMG00000012156)	Uap1 (ENSPEMG00000016224)	ENSPEMG00000024044	Uhmk1 (ENSPEMG00000001487)	Gm7694 (ENSPEMG00000026884)	Spata46 (ENSPEMG00000005249)	Nos1ap (ENSPEMG00000014465)	Olfml2b (ENSPEMG00000008167)	Atf6 (ENSPEMG00000018229)	Dusp12 (ENSPEMG00000000877)	Gm26620 (ENSPEMG00000024474)	Fcrlb (ENSPEMG00000002098)
Prairie vole	DUPLICATION
Prairie vole	MODERN SPECIES	234															ENSMOCG00000001528	ENSMOCG00000019320 #22	ENSMOCG00000019841
Prairie vole	MODERN SPECIES	158													ENSMOCG00000019935 #19	Pbx1 (ENSMOCG00000007625) #20	Nuf2 (ENSMOCG00000015225) #21	ENSMOCG00000004162 #22	ENSMOCG00000016531
Murinae	ANCESTRAL SPECIES	11	ENSGT00390000011644 #8	ENSGT00440000039028 #9	ENSGT00940000162904.c #10	ENSGT00940000162904.d #10	ENSGT00940000160836.d #11	ENSGT00390000018059.b #12	ENSGT01020000230412.A.c.b.d #13	ENSGT00390000002659 #14	ENSGT00940000162687 #15	ENSGT00390000008608 #16	ENSGT00940000156906 #17	ENSGT00940000161269 #18	ENSGT00940000157774 #19	ENSGT00940000154374.b #20	ENSGT00390000004199 #21	ENSGT00940000157380 #22	ENSGT00940000159036	ENSGT00390000014067	ENSGT00390000013340	ENSGT00940000154842.a.b	ENSGT00940000153464.A.b	ENSGT00940000157769	ENSGT00900000143287	ENSGT00940000163577	ENSGT00940000164616	ENSGT00390000007598	ENSGT00510000046975.b.u	ENSGT00940000157757	ENSGT00940000159221	ENSGT00930000151041	ENSGT00860000135883
Mus	ANCESTRAL SPECIES	5	ENSGT00390000011644 #8	ENSGT00440000039028 #9	ENSGT00940000162904.c #10	ENSGT00940000162904.d #10	ENSGT00940000160836.d #11	ENSGT00390000018059.b #12	ENSGT01020000230412.A.c.b.d #13	ENSGT00390000002659 #14	ENSGT00940000162687 #15	ENSGT00390000008608 #16	ENSGT00940000156906 #17	ENSGT00940000161269 #18	ENSGT00940000157774 #19	ENSGT00940000154374.b #20	ENSGT00390000004199 #21	ENSGT00940000157380 #22	ENSGT00940000159036	ENSGT00390000014067	ENSGT00390000013340	ENSGT00940000154842.a.b	ENSGT00940000153464.A.b	ENSGT00940000157769	ENSGT00900000143287	ENSGT00940000163577.a	ENSGT00940000163577.b	ENSGT00940000164616	ENSGT00390000007598	ENSGT00510000046975.b.u	ENSGT00940000157757	ENSGT00940000159221	ENSGT00930000151041
Mus_A	ANCESTRAL SPECIES	5	ENSGT00390000011644 #8	ENSGT00440000039028 #9	ENSGT00940000162904.c #10	ENSGT00940000162904.d #10	ENSGT00940000160836.d #11	ENSGT00390000018059.b #12	ENSGT01020000230412.A.c.b.d #13	ENSGT00390000002659 #14	ENSGT00940000162687 #15	ENSGT00390000008608.i #16	ENSGT00940000156906 #17	ENSGT00940000161269 #18	ENSGT00940000157774 #19	ENSGT00940000154374.b #20	ENSGT00390000004199 #21	ENSGT00940000157380 #22	ENSGT00940000159036	ENSGT00390000014067	ENSGT00390000013340	ENSGT00940000154842.a.b	ENSGT00940000153464.A.b	ENSGT00940000157769	ENSGT00940000164616	ENSGT00900000143287	ENSGT00940000163577.a	ENSGT00940000163577.b	ENSGT00510000046975.b.t	ENSGT00390000007598	ENSGT00510000046975.b.u	ENSGT00940000157757	ENSGT00940000159221
Ryukyu mouse	MODERN SPECIES		MGP_CAROLIEiJ_G0014816	Pogk (MGP_CAROLIEiJ_G0014817) #9	Gm4846 (MGP_CAROLIEiJ_G0014818) #10	MGP_CAROLIEiJ_G0014819 #10	Fmo9 (MGP_CAROLIEiJ_G0014820) #11	Fam78b (MGP_CAROLIEiJ_G0014821) #12	Uck2 (MGP_CAROLIEiJ_G0014822) #13	MGP_CAROLIEiJ_G0014823 #14	Aldh9a1 (MGP_CAROLIEiJ_G0014824) #15	Mgst3 (MGP_CAROLIEiJ_G0014825) #16	Lrrc52 (MGP_CAROLIEiJ_G0014826) #17	Rxrg (MGP_CAROLIEiJ_G0014827) #18	Lmx1a (MGP_CAROLIEiJ_G0014828) #19	Pbx1 (MGP_CAROLIEiJ_G0014829) #20	Nuf2 (MGP_CAROLIEiJ_G0014830) #21	Rgs5 (MGP_CAROLIEiJ_G0014831) #22	Rgs4 (MGP_CAROLIEiJ_G0014832)	Ccdc190 (MGP_CAROLIEiJ_G0014833)	Hsd17b7 (MGP_CAROLIEiJ_G0014834)	Ddr2 (MGP_CAROLIEiJ_G0014835)	Uap1 (MGP_CAROLIEiJ_G0014836)	MGP_CAROLIEiJ_G0014837	Sh2d1b2 (MGP_CAROLIEiJ_G0014838)	Sh2d1b1 (MGP_CAROLIEiJ_G0014839)	Gm7694 (MGP_CAROLIEiJ_G0014840)	Nos1ap (MGP_CAROLIEiJ_G0014841)	Spata46 (MGP_CAROLIEiJ_G0014842)	Olfml2b (MGP_CAROLIEiJ_G0014843)	Atf6 (MGP_CAROLIEiJ_G0014844)	Dusp12 (MGP_CAROLIEiJ_G0014845)	Gm26620 (MGP_CAROLIEiJ_G0014846)
Mus_B	ANCESTRAL SPECIES	7	ENSGT00390000011644 #8	ENSGT00440000039028 #9	ENSGT00940000162904.c #10	ENSGT00940000162904.d #10	ENSGT00940000160836.d #11	ENSGT00390000018059.b #12	ENSGT01020000230412.A.c.b.d #13	ENSGT00390000002659 #14	ENSGT00940000162687 #15	ENSGT00390000008608.i #16	ENSGT00940000156906 #17	ENSGT00940000161269 #18	ENSGT00940000157774 #19	ENSGT00940000154374.b #20	ENSGT00390000004199 #21	ENSGT00940000157380 #22	ENSGT00940000159036	ENSGT00390000014067	ENSGT00390000013340	ENSGT00940000154842.a.b	ENSGT00940000153464.A.b	ENSGT00940000157769	ENSGT00940000164616	ENSGT00900000143287	ENSGT00940000163577.a	ENSGT00940000163577.b	ENSGT00510000046975.b.t	ENSGT00390000007598	ENSGT00510000046975.b.u	ENSGT00940000157757	ENSGT00940000159221
Mouse	MODERN SPECIES		Tada1 (ENSMUSG00000026563) #8	Pogk (ENSMUSG00000040596) #9	Gm4846 (ENSMUSG00000086056) #10	Gm4847 (ENSMUSG00000051081) #10	Fmo9 (ENSMUSG00000026560) #11	Fam78b (ENSMUSG00000060568) #12	Uck2 (ENSMUSG00000026558) #13	Tmco1 (ENSMUSG00000052428) #14	Aldh9a1 (ENSMUSG00000026687) #15	Mgst3 (ENSMUSG00000026688) #16	Lrrc52 (ENSMUSG00000040485) #17	Rxrg (ENSMUSG00000015843) #18	Lmx1a (ENSMUSG00000026686) #19	Pbx1 (ENSMUSG00000052534) #20	Nuf2 (ENSMUSG00000026683) #21	Rgs5 (ENSMUSG00000026678) #22	Rgs4 (ENSMUSG00000038530)	Ccdc190 (ENSMUSG00000070532)	Hsd17b7 (ENSMUSG00000026675)	Ddr2 (ENSMUSG00000026674)	Uap1 (ENSMUSG00000026670)	Uhmk1 (ENSMUSG00000026667)	Sh2d1b2 (ENSMUSG00000073494)	Sh2d1b1 (ENSMUSG00000102418)	Gm7694 (ENSMUSG00000102752)	Nos1ap (ENSMUSG00000038473)	Spata46 (ENSMUSG00000042800)	Olfml2b (ENSMUSG00000038463)	Atf6 (ENSMUSG00000026663)	Dusp12 (ENSMUSG00000026659)	Gm26620 (ENSMUSG00000096968)
Mus_C	ANCESTRAL SPECIES	1	ENSGT00950000185149	ENSGT00390000011644 #8	ENSGT00440000039028 #9	ENSGT00940000162904.c #10	ENSGT00940000160836.d #11	ENSGT00390000018059.b #12	ENSGT01020000230412.A.c.b.d #13	ENSGT00390000002659 #14	ENSGT00940000162687 #15	ENSGT00390000008608.i #16	ENSGT00940000156906 #17	ENSGT00940000161269 #18	ENSGT00940000157774 #19	ENSGT00940000154374.b #20	ENSGT00390000004199 #21	ENSGT00940000157380 #22	ENSGT00940000159036	ENSGT00390000014067	ENSGT00390000013340	ENSGT00940000154842.a.b	ENSGT00940000153464.A.b	ENSGT00940000157769	ENSGT00940000164616	ENSGT00900000143287	ENSGT00940000163577.a	ENSGT00940000163577.b	ENSGT00510000046975.b.t	ENSGT00390000007598	ENSGT00510000046975.b.u	ENSGT00940000157757	ENSGT00940000159221
Steppe mouse	MODERN SPECIES	3030														Nuf2 (ENSMSIG00000012309) #21	ENSMSIG00000012391	Rgs5 (ENSMSIG00000012409) #22	Rgs4 (ENSMSIG00000012434)	Ccdc190 (ENSMSIG00000012470)	Hsd17b7 (ENSMSIG00000012507)	Ddr2 (ENSMSIG00000012540)	Uap1 (ENSMSIG00000012696)	Uhmk1 (ENSMSIG00000012729)	ENSMSIG00000012838	Sh2d1b2 (ENSMSIG00000012848)	Sh2d1b1 (ENSMSIG00000012861)	ENSMSIG00000012883	Spata46 (ENSMSIG00000012994)	ENSMSIG00000013007	Olfml2b (ENSMSIG00000013009)	Atf6 (ENSMSIG00000013034)	Dusp12 (ENSMSIG00000013104)
spretus	MODERN SPECIES		Ildr2 (MGP_SPRETEiJ_G0015622) #7	Tada1 (MGP_SPRETEiJ_G0015623) #8	Pogk (MGP_SPRETEiJ_G0015624) #9	Gm4846 (MGP_SPRETEiJ_G0015625) #10	Fmo9 (MGP_SPRETEiJ_G0015626) #11	Fam78b (MGP_SPRETEiJ_G0015627) #12	Uck2 (MGP_SPRETEiJ_G0015628) #13	Tmco1 (MGP_SPRETEiJ_G0015629) #14	Aldh9a1 (MGP_SPRETEiJ_G0015630) #15	Mgst3 (MGP_SPRETEiJ_G0015631) #16	Lrrc52 (MGP_SPRETEiJ_G0015632) #17	Rxrg (MGP_SPRETEiJ_G0015633) #18	Lmx1a (MGP_SPRETEiJ_G0015634) #19	Pbx1 (MGP_SPRETEiJ_G0015635) #20	Nuf2 (MGP_SPRETEiJ_G0015636) #21	Rgs5 (MGP_SPRETEiJ_G0015637) #22	Rgs4 (MGP_SPRETEiJ_G0015638)	Ccdc190 (MGP_SPRETEiJ_G0015639)	Hsd17b7 (MGP_SPRETEiJ_G0015640)	Ddr2 (MGP_SPRETEiJ_G0015641)	Uap1 (MGP_SPRETEiJ_G0015642)	MGP_SPRETEiJ_G0015643	Gm7694 (MGP_SPRETEiJ_G0015644)	Nos1ap (MGP_SPRETEiJ_G0015645)	Spata46 (MGP_SPRETEiJ_G0015646)	Olfml2b (MGP_SPRETEiJ_G0015647)	Atf6 (MGP_SPRETEiJ_G0015648)	Dusp12 (MGP_SPRETEiJ_G0015649)	Gm26620 (MGP_SPRETEiJ_G0015650)	Fcrlb (MGP_SPRETEiJ_G0015651)	Fcrla (MGP_SPRETEiJ_G0015652)
Shrew mouse	MODERN SPECIES	18	Tada1 (MGP_PahariEiJ_G0028053) #8	MGP_PahariEiJ_G0028054	Gm4846 (MGP_PahariEiJ_G0028055) #10	Gm4847 (MGP_PahariEiJ_G0028056) #10	Fmo9 (MGP_PahariEiJ_G0028057) #11	Fam78b (MGP_PahariEiJ_G0028058) #12	Uck2 (MGP_PahariEiJ_G0028059) #13	MGP_PahariEiJ_G0028060 #14	Aldh9a1 (MGP_PahariEiJ_G0028061) #15	Mgst3 (MGP_PahariEiJ_G0028062) #16	Lrrc52 (MGP_PahariEiJ_G0028063) #17	Rxrg (MGP_PahariEiJ_G0028064) #18	Lmx1a (MGP_PahariEiJ_G0028065) #19	Pbx1 (MGP_PahariEiJ_G0028066) #20	Nuf2 (MGP_PahariEiJ_G0028067) #21	Rgs5 (MGP_PahariEiJ_G0028068) #22	Rgs4 (MGP_PahariEiJ_G0028069)	Ccdc190 (MGP_PahariEiJ_G0028070)	Hsd17b7 (MGP_PahariEiJ_G0028071)	Ddr2 (MGP_PahariEiJ_G0028072)	Uap1 (MGP_PahariEiJ_G0028073)	Uhmk1 (MGP_PahariEiJ_G0028074)	Sh2d1b2 (MGP_PahariEiJ_G0028075)	MGP_PahariEiJ_G0028076	Gm7694 (MGP_PahariEiJ_G0028077)	Nos1ap (MGP_PahariEiJ_G0028078)	Spata46 (MGP_PahariEiJ_G0028079)	Olfml2b (MGP_PahariEiJ_G0028080)	Atf6 (MGP_PahariEiJ_G0028081)	Dusp12 (MGP_PahariEiJ_G0028082)	Gm26620 (MGP_PahariEiJ_G0028083)
Rat	MODERN SPECIES	4	Pogk (ENSRNOG00000032058) #9	Fmo13 (ENSRNOG00000043014) #10	LOC685351 (ENSRNOG00000038499) #10	Fmo9 (ENSRNOG00000025119) #11	Fam78b (ENSRNOG00000068017) #12	Uck2 (ENSRNOG00000003917) #13	Tmco1 (ENSRNOG00000003928) #14	Aldh9a1 (ENSRNOG00000004027) #15	Mgst3 (ENSRNOG00000004245) #16	Lrrc52 (ENSRNOG00000004356) #17	Rxrg (ENSRNOG00000004537) #18	Lmx1a (ENSRNOG00000004642) #19	Pbx1 (ENSRNOG00000070119) #20	Nuf2 (ENSRNOG00000002711) #21	ENSRNOG00000066769	Rgs5 (ENSRNOG00000002730) #22	Rgs4 (ENSRNOG00000002773)	Ccdc190 (ENSRNOG00000025005)	ENSRNOG00000033515	Hsd17b7 (ENSRNOG00000002826)	Ddr2 (ENSRNOG00000002881)	Uap1 (ENSRNOG00000002926)	Uhmk1 (ENSRNOG00000002941)	AABR07021734.1 (ENSRNOG00000059957)	Sh2d1b2 (ENSRNOG00000069420)	Nos1ap (ENSRNOG00000042929)	Spata46 (ENSRNOG00000002972)	AABR07021736.1 (ENSRNOG00000034300)	Olfml2b (ENSRNOG00000003018)	Atf6 (ENSRNOG00000024632)	LOC100911728 (ENSRNOG00000063975)