Percora_a ANCESTRAL SPECIES 1 ENSGT00950000185149 ENSGT00390000011644 #8 ENSGT00440000039028 #9 ENSGT00940000162904 #10 ENSGT00390000018059.b #11 ENSGT01020000230412.A.c.b.d #12 ENSGT00390000002659 ENSGT00940000162687 #13 ENSGT00390000008608 #14 ENSGT00940000156906 #15 ENSGT00940000161269 #17 ENSGT00940000157774 #18 ENSGT00940000154374.b #19 ENSGT00940000168561 ENSGT00390000004199 #21 ENSGT00940000157380 #22 ENSGT00940000159036 #24 ENSGT00390000014067 #25 ENSGT00390000013340 #26 ENSGT00940000154842.a.b #27 ENSGT00940000153464.A.b #28 ENSGT00940000157769 #29 ENSGT00900000143287 ENSGT00940000163577 #30 ENSGT00510000046975.b.t #32 ENSGT00390000007598 #31 ENSGT00510000046975.b.u ##32 ENSGT00940000157757 #33 ENSGT00940000159221 #35 ENSGT00930000151041 #36 ENSGT00860000135883 Bovidae ANCESTRAL SPECIES 1 ENSGT00950000185149 ENSGT00390000011644 #8 ENSGT00440000039028 #9 ENSGT00940000162904 #10 ENSGT00390000018059.b #11 ENSGT01020000230412.A.c.b.d #12 ENSGT00390000002659 ENSGT00940000162687 #13 ENSGT00390000008608 #14 ENSGT00940000156906 #15 ENSGT00940000161269 #17 ENSGT00940000157774 #18 ENSGT00940000154374.b #19 ENSGT00940000168561.a ENSGT00390000004199 #21 ENSGT00940000157380 #22 ENSGT00940000159036 #24 ENSGT00390000014067 #25 ENSGT00390000013340 #26 ENSGT00940000154842.a.b #27 ENSGT00940000153464.A.b #28 ENSGT00940000157769 #29 ENSGT00900000143287 ENSGT00940000163577 #30 ENSGT00510000046975.b.t #32 ENSGT00390000007598 #31 ENSGT00510000046975.b.u ##32 ENSGT00940000157757 #33 ENSGT00940000159221 #35 ENSGT00930000151041 #36 ENSGT00860000135883 Caprinae ANCESTRAL SPECIES 49 ENSGT00390000003645 ENSGT00950000183058.A.a #7 ENSGT00390000011644 #8 ENSGT00440000039028 #9 ENSGT00940000162904 #10 ENSGT00390000018059.b #11 ENSGT01020000230412.A.c.b.d #12 ENSGT00390000002659 ENSGT00940000162687 #13 ENSGT00390000008608 #14 ENSGT00940000156906 #15 ENSGT00940000161269 #17 ENSGT00940000157774 #18 ENSGT00940000154374.b #19 ENSGT00390000004199 #21 ENSGT00940000157380 #22 ENSGT00940000159036 #24 ENSGT00390000014067 #25 ENSGT00390000013340 #26 ENSGT00940000154842.a.b #27 ENSGT00940000153464.A.b #28 ENSGT00940000157769 #29 ENSGT00900000143287 ENSGT00940000163577 #30 ENSGT00390000007598 #31 ENSGT00510000046975.b.t #32 ENSGT00940000157757 #33 ENSGT00940000159221 #35 ENSGT00930000151041.w #36 ENSGT00860000135883 ENSGT01050000244808.D.fb.a #37 Rambouillet Sheep MODERN SPECIES ILDR2 (ENSOARG00020002154) #7 TADA1 (ENSOARG00020002011) #8 POGK (ENSOARG00020002000) #9 ENSOARG00020001986 #10 FAM78B (ENSOARG00020001972) #11 UCK2 (ENSOARG00020001957) #12 ENSOARG00020001921 #13 MGST3 (ENSOARG00020001904) #14 LRRC52 (ENSOARG00020001888) #15 ENSOARG00020001878 #16 RXRG (ENSOARG00020001851) #17 LMX1A (ENSOARG00020001833) #18 PBX1 (ENSOARG00020001579) #19 ENSOARG00020001519 #20 NUF2 (ENSOARG00020001492) #21 RGS5 (ENSOARG00020001477) #22 ENSOARG00020001471 #23 RGS4 (ENSOARG00020001430) #24 CCDC190 (ENSOARG00020001404) #25 HSD17B7 (ENSOARG00020001382) #26 DDR2 (ENSOARG00020001363) #27 UAP1 (ENSOARG00020001261) #28 UHMK1 (ENSOARG00020001187) #29 SH2D1B (ENSOARG00020001174) #30 SPATA46 (ENSOARG00020001153) #31 ENSOARG00020001104 #32 OLFML2B (ENSOARG00020001009) #33 ENSOARG00020000982 #34 ATF6 (ENSOARG00020000954) #35 DUSP12 (ENSOARG00020000938) #36 FCRLB (ENSOARG00020000888) #37 Goat MODERN SPECIES 22 FAM78B (ENSCHIG00000015653) #11 UCK2 (ENSCHIG00000023693) #12 TMCO1 (ENSCHIG00000026421) ENSCHIG00000021660 #13 MGST3 (ENSCHIG00000011626) #14 ENSCHIG00000010668 LRRC52 (ENSCHIG00000022157) #15 RXRG (ENSCHIG00000026695) #17 LMX1A (ENSCHIG00000022333) #18 ENSCHIG00000019761 #19 ENSCHIG00000024885 #19 ENSCHIG00000000654 ENSCHIG00000027006 ENSCHIG00000010502 NUF2 (ENSCHIG00000021734) #21 RGS5 (ENSCHIG00000022623) #22 RGS4 (ENSCHIG00000025217) #24 CCDC190 (ENSCHIG00000016871) #25 HSD17B7 (ENSCHIG00000006708) #26 DDR2 (ENSCHIG00000022077) #27 UAP1 (ENSCHIG00000015675) #28 UHMK1 (ENSCHIG00000019078) #29 ENSCHIG00000018779 SH2D1B (ENSCHIG00000012228) #30 SPATA46 (ENSCHIG00000022724) #31 ENSCHIG00000014253 #32 OLFML2B (ENSCHIG00000027176) #33 ENSCHIG00000022740 ENSCHIG00000019670 #34 ATF6 (ENSCHIG00000018456) #35 ENSCHIG00000026959 #36 Bovinae ANCESTRAL SPECIES 1 ENSGT00440000039028 #9 ENSGT00940000162904 #10 ENSGT00390000017043.l ENSGT00390000018059.b #11 ENSGT01020000230412.A.c.b.d #12 ENSGT00390000002659 ENSGT00940000163309 ENSGT00940000162687 #13 ENSGT00390000008608 #14 ENSGT00940000156906 #15 ENSGT00940000161269 #17 ENSGT00940000157774 #18 ENSGT00940000154374.b #19 ENSGT00940000168561.a ENSGT00390000004199 #21 ENSGT00940000157380 #22 ENSGT00940000159036 #24 ENSGT00390000014067 #25 ENSGT00390000013340 #26 ENSGT00940000154842.a.b #27 ENSGT00940000153464.A.b #28 ENSGT00940000157769 #29 ENSGT00940000163577 #30 ENSGT00510000046975.b.t #32 ENSGT00390000007598 #31 ENSGT00510000046975.b.u ##32 ENSGT00940000157757 #33 ENSGT00940000159221 #35 ENSGT00930000151041 #36 ENSGT01050000244808.D.fb.a #37 ENSGT01050000244808.A.b.a.a.b ##37 Bos ANCESTRAL SPECIES ENSGT00390000011644 #8 ENSGT00440000039028 #9 ENSGT00940000162904 #10 ENSGT00390000017043.l.a ENSGT00390000018059.b #11 ENSGT01020000230412.A.c.b.d #12 ENSGT00390000002659 ENSGT00940000162687 #13 ENSGT00390000008608 #14 ENSGT00940000156906 #15 ENSGT00940000161269 #17 ENSGT00940000157774 #18 ENSGT00940000154374.b #19 ENSGT00940000168561.a ENSGT00390000004199 #21 ENSGT00940000157380 #22 ENSGT00940000159036 #24 ENSGT00390000014067 #25 ENSGT00390000013340 #26 ENSGT00940000154842.a.b #27 ENSGT00940000153464.A.b #28 ENSGT00940000157769 #29 ENSGT00940000163577 #30 ENSGT00510000046975.b.t #32 ENSGT00390000007598 #31 ENSGT00510000046975.b.u ##32 ENSGT00940000157757 #33 ENSGT00940000159221 #35 ENSGT00930000151041 #36 ENSGT01050000244808.D.fb.a #37 ENSGT01050000244808.A.b.a.a.b ##37 Bos_b ANCESTRAL SPECIES 1 ENSGT00390000011644 #8 ENSGT00440000039028 #9 ENSGT00940000162904 #10 ENSGT00390000017043.l.a ENSGT00390000018059.b #11 ENSGT01020000230412.A.c.b.d #12 ENSGT00390000002659 ENSGT00940000162687 #13 ENSGT00390000008608 #14 ENSGT00940000156906 #15 ENSGT00940000161269 #17 ENSGT00940000157774 #18 ENSGT00940000154374.b #19 ENSGT00940000168561.a ENSGT00390000004199 #21 ENSGT00940000157380 #22 ENSGT00940000159036 #24 ENSGT00390000014067 #25 ENSGT00390000013340 #26 ENSGT01100000263480.a.b.b.a.b.b.b.a.b.b.a ENSGT00940000154842.a.b #27 ENSGT00940000153464.A.b #28 ENSGT00940000155477.n ENSGT00940000157769 #29 ENSGT00940000163577 #30 ENSGT00510000046975.b.t #32 ENSGT00390000007598 #31 ENSGT00510000046975.b.u ##32 ENSGT00940000157757 #33 ENSGT00940000159221 #35 ENSGT00930000151041.u #36 Hybrid Bos Indicus MODERN SPECIES 22 TADA1 (ENSBIXG00005022507) #8 POGK (ENSBIXG00005022477) #9 ENSBIXG00005022363 #10 ENSBIXG00005022024 ENSBIXG00005021998 #11 UCK2 (ENSBIXG00005021934) #12 ENSBIXG00005021883 #13 MGST3 (ENSBIXG00005002616) #14 LRRC52 (ENSBIXG00005021778) #15 RXRG (ENSBIXG00005007217) #17 LMX1A (ENSBIXG00005021672) #18 PBX1 (ENSBIXG00005003636) #19 ENSBIXG00005005540 ENSBIXG00005021294 NUF2 (ENSBIXG00005021236) #21 RGS5 (ENSBIXG00005021199) #22 ENSBIXG00005003576 ENSBIXG00005007356 RGS4 (ENSBIXG00005006600) #24 CCDC190 (ENSBIXG00005021019) #25 ENSBIXG00005003542 HSD17B7 (ENSBIXG00005020979) #26 ENSBIXG00005003536 DDR2 (ENSBIXG00005020871) #27 UAP1 (ENSBIXG00005020724) #28 ENSBIXG00005020615 UHMK1 (ENSBIXG00005020593) #29 SH2D1B (ENSBIXG00005020558) #30 ENSBIXG00005020503 #32 SPATA46 (ENSBIXG00005005741) #31 OLFML2B (ENSBIXG00005020387) #33 Cow MODERN SPECIES 22 ENSBTAG00000022504 #10 ENSBTAG00000022954 FAM78B (ENSBTAG00000047468) #11 UCK2 (ENSBTAG00000044150) #12 TMCO1 (ENSBTAG00000010009) ALDH9A1 (ENSBTAG00000017852) #13 MGST3 (ENSBTAG00000010265) #14 LRRC52 (ENSBTAG00000001686) #15 RXRG (ENSBTAG00000016801) #17 LMX1A (ENSBTAG00000012025) #18 PBX1 (ENSBTAG00000013801) #19 ENSBTAG00000053215 #19 ENSBTAG00000054238 #19 ENSBTAG00000054045 NUF2 (ENSBTAG00000007247) #21 RGS5 (ENSBTAG00000016341) #22 RGS4 (ENSBTAG00000046277) #24 CCDC190 (ENSBTAG00000027425) #25 HSD17B7 (ENSBTAG00000005976) #26 ENSBTAG00000050123 DDR2 (ENSBTAG00000004885) #27 UAP1 (ENSBTAG00000010206) #28 ENSBTAG00000001608 UHMK1 (ENSBTAG00000012694) #29 SH2D1B (ENSBTAG00000054194) #30 C3H1orf226 (ENSBTAG00000050790) SPATA46 (ENSBTAG00000010174) #31 NOS1AP (ENSBTAG00000010158) ##32 OLFML2B (ENSBTAG00000034147) #33 ATF6 (ENSBTAG00000005227) #35 DUSP12 (ENSBTAG00000021754) #36 Bos_a ANCESTRAL SPECIES 27 ENSGT00940000168561.a ENSGT00390000004199 #21 ENSGT00940000157380 #22 ENSGT00940000159036 #24 ENSGT00390000014067 #25 ENSGT00390000013340 #26 ENSGT00940000154842.a.b #27 ENSGT00940000153464.A.b #28 ENSGT00940000157769 #29 ENSGT00940000163577 #30 ENSGT00510000046975.b.t #32 ENSGT00390000007598 #31 ENSGT00510000046975.b.u ##32 ENSGT00940000157757 #33 ENSGT00940000159221 #35 ENSGT00930000151041 #36 ENSGT01050000244808.D.fb.a #37 ENSGT01050000244808.A.b.a.a.b ##37 Wild yak MODERN SPECIES 2385 RGS5 (ENSBMUG00000002097) #22 RGS4 (ENSBMUG00000002189) #24 Domestic yak MODERN SPECIES 22 ENSBGRG00000002996 ENSBGRG00000002974 ENSBGRG00000002961 ENSBGRG00000002956 ENSBGRG00000002948 ENSBGRG00000002940 ENSBGRG00000002921 ENSBGRG00000002909 ENSBGRG00000002902 ENSBGRG00000002888 ENSBGRG00000002877 ENSBGRG00000002867 ENSBGRG00000002853 ENSBGRG00000002836 NUF2 (ENSBGRG00000002820) #21 RGS5 (ENSBGRG00000002762) #22 RGS4 (ENSBGRG00000002689) #24 CCDC190 (ENSBGRG00000002667) #25 HSD17B7 (ENSBGRG00000002609) #26 DDR2 (ENSBGRG00000002518) #27 UAP1 (ENSBGRG00000002484) #28 UHMK1 (ENSBGRG00000002383) #29 SH2D1B (ENSBGRG00000002346) #30 SPATA46 (ENSBGRG00000002329) #31 ENSBGRG00000002194 #32 OLFML2B (ENSBGRG00000002127) #33 ATF6 (ENSBGRG00000002089) #35 DUSP12 (ENSBGRG00000002021) #36 FCRLB (ENSBGRG00000001988) #37 FCRLA (ENSBGRG00000001948) ##37 ENSBGRG00000001917 American bison MODERN SPECIES 3260 ENSBBBG00000000499 ENSBBBG00000006070 NUF2 (ENSBBBG00000023163) #21 RGS5 (ENSBBBG00000008963) #22 ENSBBBG00000023069 RGS4 (ENSBBBG00000023059) #24 CCDC190 (ENSBBBG00000023000) #25 HSD17B7 (ENSBBBG00000022986) #26 DDR2 (ENSBBBG00000022964) #27 UAP1 (ENSBBBG00000022895) #28 UHMK1 (ENSBBBG00000022822) #29 SH2D1B (ENSBBBG00000022793) #30 ENSBBBG00000022783 SPATA46 (ENSBBBG00000005991) #31 NOS1AP (ENSBBBG00000022767) ##32 OLFML2B (ENSBBBG00000022749) #33 ATF6 (ENSBBBG00000022711) #35 DUSP12 (ENSBBBG00000005969) #36 FCRLB (ENSBBBG00000005965) #37 Siberian musk deer MODERN SPECIES 167 ENSMMSG00000000231 ENSMMSG00000000243 ENSMMSG00000000264 ENSMMSG00000000280 ENSMMSG00000000290 NUF2 (ENSMMSG00000000308) #21 ENSMMSG00000000335 RGS5 (ENSMMSG00000000360) #22 RGS4 (ENSMMSG00000000380) #24 CCDC190 (ENSMMSG00000000408) #25 HSD17B7 (ENSMMSG00000000442) #26 DDR2 (ENSMMSG00000000474) #27 UAP1 (ENSMMSG00000000525) #28 UHMK1 (ENSMMSG00000000594) #29 SH2D1B (ENSMMSG00000000630) #30 ENSMMSG00000000662 #32 SPATA46 (ENSMMSG00000000755) #31 OLFML2B (ENSMMSG00000000781) #33 ATF6 (ENSMMSG00000000815) #35 ENSMMSG00000000834 #34 ENSMMSG00000000856 #36 ENSMMSG00000000884 FCRLB (ENSMMSG00000000915) 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