Euarchontoglires_A ANCESTRAL SPECIES 19 ENSGT00940000156172.b ENSGT00390000002061 ENSGT00940000154530 ENSGT00940000160445 ENSGT00940000161845 ENSGT00940000160340.c ENSGT00940000162398 ENSGT00940000154634.c #14 ENSGT00950000182808.b.a ENSGT00730000111180 #15 ENSGT00940000159257 #16 ENSGT00390000005651 #17 ENSGT00940000156907 #18 ENSGT00940000163578 #20 ENSGT00940000157414 #21 ENSGT00940000157353 #22 ENSGT00390000015564 #23 ENSGT00940000160659 #24 ENSGT00940000161270 #25 ENSGT00940000159435 #26 ENSGT00940000160385 #27 ENSGT00940000162917 #28 ENSGT00390000002200.a.b #29 ENSGT00940000162798 #30 ENSGT00940000154635.a #32 ENSGT00950000182992.a.b.b #33 ENSGT00940000154968 #34 ENSGT00940000154824.a #35 ENSGT00390000001688 #36 ENSGT00940000157532 #37 ENSGT00940000156113 Glires ANCESTRAL SPECIES 20 ENSGT00940000156172.b ENSGT00390000002061 ENSGT00940000154530 ENSGT00940000160445 ENSGT00940000161845 ENSGT00940000160340.c ENSGT00940000162398 ENSGT00940000154634.c #14 ENSGT00950000182808.b.a ENSGT00730000111180 #15 ENSGT00940000159257 #16 ENSGT00390000005651 #17 ENSGT00940000156907 #18 ENSGT00940000163578 #20 ENSGT00940000157414 #21 ENSGT00940000157353 #22 ENSGT00390000015564 #23 ENSGT00940000160659 #24 ENSGT00940000161270 #25 ENSGT00940000159435 #26 ENSGT00940000160385 #27 ENSGT00940000162917 #28 ENSGT00390000002200.a.b #29 ENSGT00940000162798 #30 ENSGT00940000154635.a #32 ENSGT00950000182992.a.b.b #33 ENSGT00940000154968 #34 ENSGT00940000154824.a #35 ENSGT00390000001688 #36 ENSGT00940000157532 #37 ENSGT00940000156113 Rodentia ANCESTRAL SPECIES 19 ENSGT00940000156172.b ENSGT00390000002061 ENSGT00940000154530 ENSGT00940000160445 ENSGT00940000161845 ENSGT00940000160340.c ENSGT00940000162398 ENSGT00940000154634.c #14 ENSGT00950000182808.b.a ENSGT00730000111180 #15 ENSGT00940000159257 #16 ENSGT00390000005651 #17 ENSGT00940000156907 #18 ENSGT00940000163578 #20 ENSGT00940000157414 #21 ENSGT00940000157353 #22 ENSGT00390000015564 #23 ENSGT00940000160659 #24 ENSGT00940000161270 #25 ENSGT00940000159435 #26 ENSGT00940000160385 #27 ENSGT00940000162917 #28 ENSGT00390000002200.a.b #29 ENSGT00940000162798 #30 ENSGT00940000154635.a #32 ENSGT00950000182992.a.b.b #33 ENSGT00940000154968 #34 ENSGT00940000154824.a #35 ENSGT00390000001688 #36 ENSGT00940000157532 #37 ENSGT00940000156113 Rodentia_A ANCESTRAL SPECIES 18 ENSGT00940000156172.b ENSGT00390000002061 ENSGT00940000154530 ENSGT00940000160445 ENSGT00940000161845 ENSGT00940000160340.c ENSGT00940000162398 ENSGT00940000154634.c #14 ENSGT00950000182808.b.a ENSGT00730000111180 #15 ENSGT00940000159257 #16 ENSGT00390000005651 #17 ENSGT00940000156907 #18 ENSGT00940000163578 #20 ENSGT00940000157414 #21 ENSGT00940000157353 #22 ENSGT00390000015564 #23 ENSGT00940000160659 #24 ENSGT00940000161270 #25 ENSGT00940000159435 #26 ENSGT00940000160385 #27 ENSGT00940000162917 #28 ENSGT00390000002200.a.b #29 ENSGT00940000162798 #30 ENSGT00940000154635.a #32 ENSGT00950000182992.a.b.b #33 ENSGT00940000154968 #34 ENSGT00940000154824.a #35 ENSGT00390000001688 #36 ENSGT00940000157532 #37 ENSGT00940000156113 Hystricomorpha ANCESTRAL SPECIES 12 ENSGT00940000157988 ENSGT00940000156172.b ENSGT00390000002061 ENSGT00940000154530 ENSGT00940000160445 ENSGT00940000161845 ENSGT00940000160340.c ENSGT00940000162398 ENSGT00940000154634.c #14 ENSGT00730000111180 #15 ENSGT00940000159257 #16 ENSGT00390000005651 #17 ENSGT00940000156907 #18 ENSGT00940000163578 #20 ENSGT00940000157414 #21 ENSGT00940000157353 #22 ENSGT00390000015564 #23 ENSGT00940000160659 #24 ENSGT00940000161270 #25 ENSGT00940000159435 #26 ENSGT00940000160385 #27 ENSGT00940000162917 #28 ENSGT00390000002200.a.b #29 ENSGT00940000162798 #30 ENSGT00940000154635.a #32 ENSGT00950000182992.a.b.b #33 ENSGT00940000154968 #34 ENSGT00940000154824.a #35 ENSGT00390000001688 #36 ENSGT00940000157532 #37 ENSGT00940000156113 Hystricomorpha_a ANCESTRAL SPECIES 9 ENSGT00940000157988 ENSGT00940000156172.b ENSGT00390000002061 ENSGT00940000154530 ENSGT00940000160445 ENSGT00940000161845 ENSGT00940000160340.c ENSGT00940000162398 ENSGT00940000154634.c #14 ENSGT00730000111180 #15 ENSGT00940000159257 #16 ENSGT00390000005651 #17 ENSGT00940000156907 #18 ENSGT00940000163578.e #20 ENSGT00940000157414 #21 ENSGT00940000157353 #22 ENSGT00390000015564 #23 ENSGT00940000160659 #24 ENSGT00940000161270 #25 ENSGT00940000159435 #26 ENSGT00940000160385 #27 ENSGT00940000162917 #28 ENSGT00390000002200.a.b #29 ENSGT00940000162798 #30 ENSGT00940000154635.a #32 ENSGT00950000182992.a.b.b #33 ENSGT00940000154968 #34 ENSGT00940000154824.a #35 ENSGT00390000001688 #36 ENSGT00940000157532 #37 ENSGT00940000156113 Hystricomorpha_b ANCESTRAL SPECIES 25 ENSGT00940000157988 ENSGT00940000156172.b ENSGT00390000002061 ENSGT00940000154530 ENSGT00940000160445 ENSGT00940000161845 ENSGT00940000160340.c ENSGT00940000162398 ENSGT00940000154634.c #14 ENSGT00730000111180 #15 ENSGT00940000159257 #16 ENSGT00390000005651 #17 ENSGT00940000156907 #18 ENSGT00940000163578.e #20 ENSGT00940000157414 #21 ENSGT00940000157353 #22 ENSGT00390000015564 #23 ENSGT00940000160659 #24 ENSGT00940000161270 #25 ENSGT00940000159435 #26 ENSGT00940000160385 #27 ENSGT00940000162917 #28 ENSGT00390000002200.a.b #29 ENSGT00940000162798 #30 ENSGT00940000154635.a #32 ENSGT00950000182992.a.b.b #33 ENSGT00940000154968 #34 ENSGT00940000154824.a #35 ENSGT00390000001688 #36 ENSGT00940000157532 #37 ENSGT00940000156113 Long-tailed chinchilla MODERN SPECIES 124 IMPA1 (ENSCLAG00000008323) #14 ZFAND1 (ENSCLAG00000008546) #15 CHMP4C (ENSCLAG00000015093) #16 SNX16 (ENSCLAG00000004523) #17 RALYL (ENSCLAG00000005228) #18 ENSCLAG00000006392 #19 ENSCLAG00000004005 #20 LRRCC1 (ENSCLAG00000005019) #21 E2F5 (ENSCLAG00000013791) #22 RBIS (ENSCLAG00000012678) #23 CA13 (ENSCLAG00000013549) #24 CA1 (ENSCLAG00000009698) #25 CA3 (ENSCLAG00000009786) #26 CA2 (ENSCLAG00000008173) #27 PSKH2 (ENSCLAG00000004053) #28 ATP6V0D2 (ENSCLAG00000004533) #29 SLC7A13 (ENSCLAG00000004671) #30 ENSCLAG00000004953 #31 ENSCLAG00000005626 #32 RMDN1 (ENSCLAG00000004365) #33 CPNE3 (ENSCLAG00000006089) #34 CNGB3 (ENSCLAG00000007201) #35 CNBD1 (ENSCLAG00000007926) #36 MMP16 (ENSCLAG00000006099) #37 Degu MODERN SPECIES 206 ENSODEG00000000839 PMP2 (ENSODEG00000000678) FABP9 (ENSODEG00000000718) ENSODEG00000000739 FABP4 (ENSODEG00000000750) FABP12 (ENSODEG00000000763) ENSODEG00000000784 #14 ZFAND1 (ENSODEG00000000821) #15 CHMP4C (ENSODEG00000000862) #16 SNX16 (ENSODEG00000000903) #17 ENSODEG00000000923 ENSODEG00000000938 RALYL (ENSODEG00000001012) #18 LRRCC1 (ENSODEG00000001103) #21 E2F5 (ENSODEG00000003935) #22 ENSODEG00000003981 #23 CA13 (ENSODEG00000004003) #24 CA1 (ENSODEG00000004037) #25 CA3 (ENSODEG00000004062) #26 CA2 (ENSODEG00000004074) #27 ENSODEG00000004094 ATP6V0D2 (ENSODEG00000004115) #29 SLC7A13 (ENSODEG00000002051) #30 WWP1 (ENSODEG00000002080) #32 RMDN1 (ENSODEG00000002107) #33 CPNE3 (ENSODEG00000002152) #34 CNGB3 (ENSODEG00000002187) #35 Guinea pig MODERN SPECIES ZBTB10 (ENSCPOG00000013700) ZNF704 (ENSCPOG00000012507) PAG1 (ENSCPOG00000039715) FABP5 (ENSCPOG00000039055) PMP2 (ENSCPOG00000035011) FABP4 (ENSCPOG00000038872) FABP12 (ENSCPOG00000012162) IMPA1 (ENSCPOG00000020959) #14 ENSCPOG00000014075 #15 CHMP4C (ENSCPOG00000032705) #16 SNX16 (ENSCPOG00000013718) #17 RALYL (ENSCPOG00000012314) #18 ENSCPOG00000021018 #20 ENSCPOG00000034315 #21 ENSCPOG00000032576 #21 ENSCPOG00000026476 #22 RBIS (ENSCPOG00000035656) #23 CA13 (ENSCPOG00000037459) #24 CA1 (ENSCPOG00000012870) #25 CA3 (ENSCPOG00000033182) #26 CA2 (ENSCPOG00000007929) #27 PSKH2 (ENSCPOG00000009634) #28 ATP6V0D2 (ENSCPOG00000009640) #29 SLC7A13 (ENSCPOG00000034579) #30 WWP1 (ENSCPOG00000014407) #32 ENSCPOG00000014411 #33 CPNE3 (ENSCPOG00000014415) #34 CNGB3 (ENSCPOG00000012943) #35 MMP16 (ENSCPOG00000002700) #37 RIPK2 (ENSCPOG00000006415) OSGIN2 (ENSCPOG00000013694) Naked mole-rat female DUPLICATION Naked mole-rat female MODERN SPECIES 13 FABP12 (ENSHGLG00000015629) ENSHGLG00000038181 SLC10A5 (ENSHGLG00000033014) ZFAND1 (ENSHGLG00000045302) #15 CHMP4C (ENSHGLG00000015356) #16 SNX16 (ENSHGLG00000008885) #17 ENSHGLG00000020227 ENSHGLG00000033433 ENSHGLG00000034843 ENSHGLG00000038321 ENSHGLG00000041675 ENSHGLG00000047825 ENSHGLG00000004866 #18 ENSHGLG00000047118 LRRCC1 (ENSHGLG00000007603) #21 ENSHGLG00000005836 #22 ENSHGLG00000049225 #23 CA13 (ENSHGLG00000010003) #24 ENSHGLG00000043682 CA1 (ENSHGLG00000008038) #25 CA3 (ENSHGLG00000034708) #26 CA2 (ENSHGLG00000005638) #27 ENSHGLG00000002610 PSKH2 (ENSHGLG00000005049) #28 ATP6V0D2 (ENSHGLG00000014042) #29 SLC7A13 (ENSHGLG00000013058) #30 ENSHGLG00000021351 ENSHGLG00000016454 #32 RMDN1 (ENSHGLG00000018375) #33 ENSHGLG00000021216 ENSHGLG00000016017 #34 Naked mole-rat female MODERN SPECIES 19 ENSHGLG00000045868 ZNF609 (ENSHGLG00000005885) TRIP4 (ENSHGLG00000009286) PCLAF (ENSHGLG00000042208) CSNK1G1 (ENSHGLG00000008107) PPIB (ENSHGLG00000036036) SNX22 (ENSHGLG00000016133) SNX1 (ENSHGLG00000015096) CIAO2A (ENSHGLG00000018054) DAPK2 (ENSHGLG00000013578) HERC1 (ENSHGLG00000015429) ENSHGLG00000006447 USP3 (ENSHGLG00000008193) ENSHGLG00000049466 ENSHGLG00000044085 ENSHGLG00000014469 #22 CA12 (ENSHGLG00000036575) APH1B (ENSHGLG00000031885) ENSHGLG00000042104 RAB8B (ENSHGLG00000049367) ENSHGLG00000008830 LACTB (ENSHGLG00000049143) ENSHGLG00000013579 ENSHGLG00000006753 ENSHGLG00000032199 ENSHGLG00000048789 ENSHGLG00000005786 RORA (ENSHGLG00000010547) NARG2 (ENSHGLG00000041744) ENSHGLG00000008172 ENSHGLG00000038903 Sciuridae ANCESTRAL SPECIES 17 ENSGT00940000157988.h ENSGT00940000156172.b ENSGT00390000002061 ENSGT00940000154530 ENSGT00940000160445 ENSGT00940000161845 ENSGT00940000160340.c ENSGT00940000162398 ENSGT00940000154634.c #14 ENSGT00950000182808.b.a ENSGT00730000111180 #15 ENSGT00940000159257 #16 ENSGT00390000005651 #17 ENSGT00940000156907 #18 ENSGT00940000157414 #21 ENSGT00940000157353 #22 ENSGT00390000015564 #23 ENSGT00940000160659 #24 ENSGT00940000161270 #25 ENSGT00940000159435 #26 ENSGT00940000160385 #27 ENSGT00940000162917 #28 ENSGT00390000002200.a.b #29 ENSGT00940000162798 #30 ENSGT00940000154635.a #32 ENSGT00950000182992.a.b.b #33 ENSGT00940000154968 #34 ENSGT00940000154824.a #35 ENSGT00390000001688 #36 ENSGT00940000157532 #37 ENSGT00940000156113 Marmotini ANCESTRAL SPECIES 10 ENSGT00940000157988.h ENSGT00940000156172.b ENSGT00390000002061 ENSGT00940000154530 ENSGT00940000160445 ENSGT00940000161845 ENSGT00940000160340.c ENSGT00940000162398 ENSGT00940000154634.c #14 ENSGT00950000182808.b.a ENSGT00730000111180 #15 ENSGT00940000159257 #16 ENSGT00390000005651 #17 ENSGT00940000156907 #18 ENSGT00940000157414 #21 ENSGT00940000157353 #22 ENSGT00390000015564 #23 ENSGT00940000160659 #24 ENSGT00940000161270 #25 ENSGT00940000159435 #26 ENSGT00940000160385 #27 ENSGT00940000162917 #28 ENSGT00390000002200.a.b #29 ENSGT00940000162798 #30 ENSGT00940000154635.a #32 ENSGT00950000182992.a.b.b #33 ENSGT00940000154968 #34 ENSGT00940000154824.a #35 ENSGT00390000001688 #36 ENSGT00940000157532 #37 ENSGT00940000156113 Marmotini_b ANCESTRAL SPECIES 6 ENSGT00940000157988.h ENSGT00940000156172.b ENSGT00390000002061 ENSGT00940000154530.v ENSGT00940000160445 ENSGT00940000161845 ENSGT00940000160340.c ENSGT00940000162398 ENSGT00940000154634.c #14 ENSGT00950000182808.b.a ENSGT00730000111180 #15 ENSGT00940000159257 #16 ENSGT00390000005651 #17 ENSGT00940000156907 #18 ENSGT00940000157414 #21 ENSGT00940000157353 #22 ENSGT00390000015564 #23 ENSGT00940000160659 #24 ENSGT00940000161270 #25 ENSGT00940000159435 #26 ENSGT00940000160385 #27 ENSGT00940000162917 #28 ENSGT00390000002200.a.b #29 ENSGT00940000162798 #30 ENSGT00940000154635.a #32 ENSGT00950000182992.a.b.b #33 ENSGT00940000154968 #34 ENSGT00940000154824.a #35 ENSGT00390000001688 #36 ENSGT00940000157532 #37 ENSGT00940000156113 Arctic ground squirrel MODERN SPECIES 1 PAG1 (ENSUPAG00010016202) ENSUPAG00010016196 PMP2 (ENSUPAG00010016188) FABP9 (ENSUPAG00010016182) FABP4 (ENSUPAG00010016177) FABP12 (ENSUPAG00010016156) IMPA1 (ENSUPAG00010016145) #14 SLC10A5 (ENSUPAG00010016142) ZFAND1 (ENSUPAG00010016136) #15 CHMP4C (ENSUPAG00010016128) #16 SNX16 (ENSUPAG00010016112) #17 ENSUPAG00010016101 ENSUPAG00010016095 RALYL (ENSUPAG00010016006) #18 LRRCC1 (ENSUPAG00010015955) #21 E2F5 (ENSUPAG00010015950) #22 RBIS (ENSUPAG00010015945) #23 CA13 (ENSUPAG00010015939) #24 CA1 (ENSUPAG00010015922) #25 CA3 (ENSUPAG00010015904) #26 CA2 (ENSUPAG00010015877) #27 PSKH2 (ENSUPAG00010015868) #28 ATP6V0D2 (ENSUPAG00010015857) #29 SLC7A13 (ENSUPAG00010015850) #30 WWP1 (ENSUPAG00010015775) #32 RMDN1 (ENSUPAG00010015729) #33 CPNE3 (ENSUPAG00010015696) #34 CNGB3 (ENSUPAG00010015625) #35 CNBD1 (ENSUPAG00010015603) #36 MMP16 (ENSUPAG00010015590) #37 RIPK2 (ENSUPAG00010015578) Squirrel MODERN SPECIES 144 LRRCC1 (ENSSTOG00000013315) #21 E2F5 (ENSSTOG00000013339) #22 ENSSTOG00000034146 #23 CA13 (ENSSTOG00000013348) #24 CA1 (ENSSTOG00000013359) #25 CA3 (ENSSTOG00000016161) #26 CA2 (ENSSTOG00000013370) #27 ENSSTOG00000022797 PSKH2 (ENSSTOG00000014844) #28 ATP6V0D2 (ENSSTOG00000014846) #29 SLC7A13 (ENSSTOG00000027510) #30 WWP1 (ENSSTOG00000005233) #32 RMDN1 (ENSSTOG00000005267) #33 CPNE3 (ENSSTOG00000005283) #34 CNGB3 (ENSSTOG00000004002) #35 MMP16 (ENSSTOG00000002129) #37 RIPK2 (ENSSTOG00000015168) Alpin marmot MODERN SPECIES 16 PAG1 (ENSMMMG00000005917) ENSMMMG00000005936 PMP2 (ENSMMMG00000005937) FABP9 (ENSMMMG00000005971) FABP4 (ENSMMMG00000005987) FABP12 (ENSMMMG00000005993) IMPA1 (ENSMMMG00000006037) #14 SLC10A5 (ENSMMMG00000006050) ZFAND1 (ENSMMMG00000006054) #15 CHMP4C (ENSMMMG00000006062) #16 SNX16 (ENSMMMG00000006095) #17 ENSMMMG00000006124 ENSMMMG00000006130 RALYL (ENSMMMG00000006166) #18 LRRCC1 (ENSMMMG00000006309) #21 ENSMMMG00000006357 #22 RBIS (ENSMMMG00000006364) #23 CA13 (ENSMMMG00000006375) #24 CA1 (ENSMMMG00000006395) #25 CA3 (ENSMMMG00000006418) #26 CA2 (ENSMMMG00000006447) #27 PSKH2 (ENSMMMG00000006459) #28 ATP6V0D2 (ENSMMMG00000006485) #29 SLC7A13 (ENSMMMG00000006508) #30 WWP1 (ENSMMMG00000006530) #32 RMDN1 (ENSMMMG00000006584) #33 CPNE3 (ENSMMMG00000006607) #34 CNGB3 (ENSMMMG00000006632) #35 CNBD1 (ENSMMMG00000006674) #36 ENSMMMG00000006702 MMP16 (ENSMMMG00000006720) #37 Eurasian red squirrel MODERN SPECIES ENSSVLG00005003088 PMP2 (ENSSVLG00005003111) FABP9 (ENSSVLG00005003138) FABP4 (ENSSVLG00005003153) FABP12 (ENSSVLG00005003175) IMPA1 (ENSSVLG00005003206) #14 SLC10A5 (ENSSVLG00005003234) ZFAND1 (ENSSVLG00005003265) #15 CHMP4C (ENSSVLG00005003337) #16 SNX16 (ENSSVLG00005003359) #17 ENSSVLG00005003398 ENSSVLG00005003416 RALYL (ENSSVLG00005003476) #18 ENSSVLG00005003589 ENSSVLG00005003612 #21 E2F5 (ENSSVLG00005003659) #22 ENSSVLG00005003688 #23 ENSSVLG00005003696 #24 CA1 (ENSSVLG00005003719) #25 CA3 (ENSSVLG00005003745) #26 CA2 (ENSSVLG00005003764) #27 PSKH2 (ENSSVLG00005003785) #28 ATP6V0D2 (ENSSVLG00005000158) #29 SLC7A13 (ENSSVLG00005000164) #30 WWP1 (ENSSVLG00005000173) #32 RMDN1 (ENSSVLG00005000183) #33 CPNE3 (ENSSVLG00005000195) #34 ENSSVLG00005000217 ENSSVLG00005000230 CNGB3 (ENSSVLG00005000250) #35 CNBD1 (ENSSVLG00005000279) #36 Rodentia_B ANCESTRAL SPECIES 17 ENSGT00940000156172.b ENSGT00390000002061 ENSGT00940000154530 ENSGT00940000160445 ENSGT00940000161845 ENSGT00940000160340.c ENSGT00940000162398 ENSGT00940000154634.c #14 ENSGT00950000182808.b.a ENSGT00730000111180 #15 ENSGT00940000159257 #16 ENSGT00390000005651 #17 ENSGT00940000156907 #18 ENSGT00940000163578 #20 ENSGT00940000157414 #21 ENSGT00940000157353 #22 ENSGT00390000015564 #23 ENSGT00940000160659 #24 ENSGT00940000161270 #25 ENSGT00940000159435 #26 ENSGT00940000160385 #27 ENSGT00940000162917 #28 ENSGT00390000002200.a.b #29 ENSGT00940000162798 #30 ENSGT00940000154635.a #32 ENSGT00950000182992.a.b.b #33 ENSGT00940000154968 #34 ENSGT00940000154824.a #35 ENSGT00390000001688 #36 ENSGT00940000157532 #37 ENSGT00940000156113 Myomorpha ANCESTRAL SPECIES 18 ENSGT00940000156172.b ENSGT00390000002061 ENSGT00940000154530 ENSGT00940000160445 ENSGT00940000161845 ENSGT00940000160340.c ENSGT00940000162398 ENSGT00940000154634.c #14 ENSGT00950000182808.b.a ENSGT00730000111180 #15 ENSGT00940000159257 #16 ENSGT00390000005651 #17 ENSGT00940000156907 #18 ENSGT00940000163578 #20 ENSGT00940000157414 #21 ENSGT00940000157353 #22 ENSGT00390000015564 #23 ENSGT00940000160659 #24 ENSGT00940000161270 #25 ENSGT00940000159435 #26 ENSGT00940000160385 #27 ENSGT00390000002200.a.b #29 ENSGT00940000162798 #30 ENSGT00940000154635.a #32 ENSGT00950000182992.a.b.b #33 ENSGT00940000154968 #34 ENSGT00940000154824.a #35 ENSGT00390000001688 #36 ENSGT00940000157532 #37 ENSGT00940000156113 ENSGT00390000006658.a.b Muroidea ANCESTRAL SPECIES 14 ENSGT00940000156172.b ENSGT00390000002061 ENSGT00940000154530 ENSGT00940000160445 ENSGT00940000161845 ENSGT00940000160340.c ENSGT00940000162398 ENSGT00940000154634.c #14 ENSGT00950000182808.b.a ENSGT00730000111180 #15 ENSGT00940000159257 #16 ENSGT00390000005651 #17 ENSGT00940000156907 #18 ENSGT00940000163578 #20 ENSGT00940000157414 #21 ENSGT00940000157353 #22 ENSGT00390000015564 #23 ENSGT00940000160659 #24 ENSGT00940000161270 #25 ENSGT00940000159435 #26 ENSGT00940000160385 #27 ENSGT00390000002200.a.b #29 ENSGT00940000162798 #30 ENSGT00940000154635.a #32 ENSGT00950000182992.a.b.b #33 ENSGT00940000154968 #34 ENSGT00940000154824.a #35 ENSGT00390000001688 #36 ENSGT00940000157532 #37 ENSGT00940000156113 ENSGT00390000006658.a.b Muroidea_A ANCESTRAL SPECIES 3 ENSGT00940000156172.b ENSGT00390000002061 ENSGT00940000154530 ENSGT00940000160445 ENSGT00940000161845 ENSGT00940000160340.c ENSGT00940000162398 ENSGT00940000154634.c #14 ENSGT00950000182808.b.a ENSGT00730000111180 #15 ENSGT00940000159257 #16 ENSGT00390000005651 #17 ENSGT00940000156907 #18 ENSGT00940000163578.d #20 ENSGT00940000157414 #21 ENSGT00940000157353 #22 ENSGT00390000015564.y #23 ENSGT00940000160659 #24 ENSGT00940000161270 #25 ENSGT00940000159435 #26 ENSGT00940000160385 #27 ENSGT00960000186656.a.a.a.a.a.b.db ENSGT00390000002200.a.b #29 ENSGT00940000162798 #30 ENSGT00940000154635.a #32 ENSGT00950000182992.a.b.b #33 ENSGT00940000154968 #34 ENSGT00940000154824.a #35 ENSGT00390000001688 #36 ENSGT00940000157532 #37 ENSGT00940000156113 Cricetidae ANCESTRAL SPECIES 2 ENSGT00940000156172.b ENSGT00390000002061 ENSGT00940000154530 ENSGT00940000160445 ENSGT00940000161845 ENSGT00940000160340.c ENSGT00940000162398 ENSGT00940000154634.c #14 ENSGT00950000182808.b.a ENSGT00730000111180 #15 ENSGT00940000159257 #16 ENSGT00390000005651 #17 ENSGT00940000156907 #18 ENSGT00940000163578.d #20 ENSGT00940000157414 #21 ENSGT00940000157353 #22 ENSGT00390000015564.y #23 ENSGT00940000160659 #24 ENSGT00940000161270 #25 ENSGT00940000159435 #26 ENSGT00940000160385 #27 ENSGT00960000186656.a.a.a.a.a.b.db.c.a ENSGT00390000002200.a.b #29 ENSGT00940000162798 #30 ENSGT00940000154635.a #32 ENSGT00950000182992.a.b.b #33 ENSGT00940000154968 #34 ENSGT00940000154824.a #35 ENSGT00390000001688 #36 ENSGT00940000157532 #37 ENSGT00940000156113 Cricetinae ANCESTRAL SPECIES 31 ENSGT00940000156172.b ENSGT00390000002061 ENSGT00940000154530 ENSGT00940000160445 ENSGT00940000161845 ENSGT00940000160340.c ENSGT00940000162398 ENSGT00940000154634.c #14 ENSGT00950000182808.b.a ENSGT00730000111180 #15 ENSGT00940000159257 #16 ENSGT00390000005651 #17 ENSGT00940000156907 #18 ENSGT00940000163578.d #20 ENSGT00940000157414 #21 ENSGT00940000157353 #22 ENSGT00390000015564.y #23 ENSGT00940000160659 #24 ENSGT00940000161270 #25 ENSGT00940000159435 #26 ENSGT00940000160385 #27 ENSGT00960000186656.a.a.a.a.a.b.db.c.b.a ENSGT00390000002200.a.b #29 ENSGT00940000162798.c #30 ENSGT00940000154635.a #32 ENSGT00950000182992.a.b.b #33 ENSGT00940000154968 #34 ENSGT00940000154824.a #35 ENSGT00940000157532 #37 ENSGT00940000156113 ENSGT00390000006658.a.b Chinese hamster chok1gshd MODERN SPECIES 136 Zfp704 (ENSCGRG00001015964) Pag1 (ENSCGRG00001016853) ENSCGRG00001017619 Pmp2 (ENSCGRG00001017853) Fabp9 (ENSCGRG00001019826) Fabp4 (ENSCGRG00001020644) Fabp12 (ENSCGRG00001021024) Impa1 (ENSCGRG00001023325) #14 Slc10a5 (ENSCGRG00001007748) Zfand1 (ENSCGRG00001014683) #15 Chmp4c (ENSCGRG00001016277) #16 Snx16 (ENSCGRG00001016937) #17 Ralyl (ENSCGRG00001009241) #18 Slc7a12 (ENSCGRG00001017838) #20 Lrrcc1 (ENSCGRG00001019271) #21 E2f5 (ENSCGRG00001020704) #22 Rbis (ENSCGRG00001001149) #23 Car13 (ENSCGRG00001008348) #24 Car1 (ENSCGRG00001010317) #25 Car3 (ENSCGRG00001012328) #26 ENSCGRG00001016156 #27 ENSCGRG00001016662 #30 ENSCGRG00001017425 ENSCGRG00001004056 ENSCGRG00001006846 ENSCGRG00001010480 ENSCGRG00001011850 Atp6v0d2 (ENSCGRG00001012671) #29 ENSCGRG00001014922 #30 Wwp1 (ENSCGRG00001017339) #32 Rmdn1 (ENSCGRG00001019893) #33 Golden Hamster MODERN SPECIES 625 Hey1 (ENSMAUG00000018202) Mrps28 (ENSMAUG00000009465) Tpd52 (ENSMAUG00000019634) Zbtb10 (ENSMAUG00000013063) Zfp704 (ENSMAUG00000011852) Pag1 (ENSMAUG00000009163) Fabp5 (ENSMAUG00000004508) Impa1 (ENSMAUG00000007999) #14 Slc10a5 (ENSMAUG00000008626) Zfand1 (ENSMAUG00000004596) #15 ENSMAUG00000007174 #16 Snx16 (ENSMAUG00000013510) #17 ENSMAUG00000011765 Ralyl (ENSMAUG00000015149) #18 Lrrcc1 (ENSMAUG00000003362) #21 E2f5 (ENSMAUG00000013104) #22 Rbis (ENSMAUG00000013005) #23 Car1 (ENSMAUG00000021787) #25 Car3 (ENSMAUG00000015409) #26 Car2 (ENSMAUG00000021716) #27 ENSMAUG00000020800 ENSMAUG00000009831 Atp6v0d2 (ENSMAUG00000001919) #29 Slc7a13 (ENSMAUG00000014094) #30 Wwp1 (ENSMAUG00000009025) #32 Rmdn1 (ENSMAUG00000007296) #33 Cpne3 (ENSMAUG00000019528) #34 Cngb3 (ENSMAUG00000019078) #35 Mmp16 (ENSMAUG00000004025) #37 ENSMAUG00000010464 Ripk2 (ENSMAUG00000008933) Cricetidae_B ANCESTRAL SPECIES 2 ENSGT00940000156172.b ENSGT00390000002061 ENSGT00940000154530 ENSGT00940000160445 ENSGT00940000161845 ENSGT00940000160340.c ENSGT00940000162398 ENSGT00940000154634.c #14 ENSGT00950000182808.b.a ENSGT00730000111180 #15 ENSGT00940000159257 #16 ENSGT00390000005651 #17 ENSGT00940000156907 #18 ENSGT00940000163578.d #20 ENSGT00940000157414 #21 ENSGT00940000157353 #22 ENSGT00390000015564.y #23 ENSGT00940000160659 #24 ENSGT00940000161270 #25 ENSGT00940000159435 #26 ENSGT00940000160385 #27 Prairie vole MODERN SPECIES 355 Pag1 (ENSMOCG00000004189) Fabp5 (ENSMOCG00000013841) Pmp2 (ENSMOCG00000014454) Fabp9 (ENSMOCG00000007329) Fabp4 (ENSMOCG00000015848) Impa1 (ENSMOCG00000019803) #14 Slc10a5 (ENSMOCG00000012491) Zfand1 (ENSMOCG00000016802) #15 Chmp4c (ENSMOCG00000017950) #16 Snx16 (ENSMOCG00000021866) #17 Pramel12 (ENSMOCG00000003485) Ralyl (ENSMOCG00000017371) #18 ENSMOCG00000000761 Slc7a12 (ENSMOCG00000017598) #20 Lrrcc1 (ENSMOCG00000003008) #21 E2f5 (ENSMOCG00000018541) #22 ENSMOCG00000020710 #23 Car13 (ENSMOCG00000021098) #24 ENSMOCG00000008540 Car1 (ENSMOCG00000000956) #25 Car3 (ENSMOCG00000006267) #26 Car2 (ENSMOCG00000011119) #27 ENSMOCG00000019041 Il7 (ENSMOCG00000011670) Zc2hc1a (ENSMOCG00000012476) Pkia (ENSMOCG00000012790) ENSMOCG00000014261 ENSMOCG00000016420 ENSMOCG00000019032 Pex2 (ENSMOCG00000020937) Zfhx4 (ENSMOCG00000021103) Northern American deer mouse MODERN SPECIES 11 ENSPEMG00000004388 Anks6 (ENSPEMG00000009935) ENSPEMG00000029916 Gabbr2 (ENSPEMG00000014107) Tbc1d2 (ENSPEMG00000015641) Coro2a (ENSPEMG00000016885) Trim14 (ENSPEMG00000018245) Nans (ENSPEMG00000018611) ENSPEMG00000018728 Hemgn (ENSPEMG00000019935) ENSPEMG00000030142 ENSPEMG00000019967 ENSPEMG00000022980 #20 ENSPEMG00000025566 #20 Lrrcc1 (ENSPEMG00000002908) #21 E2f5 (ENSPEMG00000000226) #22 ENSPEMG00000024029 #23 Car13 (ENSPEMG00000009184) #24 Car1 (ENSPEMG00000010613) #25 Car3 (ENSPEMG00000007557) #26 Car2 (ENSPEMG00000011693) #27 ENSPEMG00000026628 #30 ENSPEMG00000000887 ENSPEMG00000007687 Xpa (ENSPEMG00000020005) Ncbp1 (ENSPEMG00000020105) Tstd2 (ENSPEMG00000020174) Tmod1 (ENSPEMG00000020203) Tdrd7 (ENSPEMG00000020225) ENSPEMG00000026899 Stra6l (ENSPEMG00000000351) Murinae ANCESTRAL SPECIES 40 ENSGT00390000002061 ENSGT00940000154530 ENSGT00940000160445 ENSGT00940000161845 ENSGT00940000160340.c ENSGT00940000162398 ENSGT00940000154634.c #14 ENSGT00950000182808.b.a ENSGT00730000111180 #15 ENSGT00940000159257 #16 ENSGT00390000005651 #17 ENSGT00940000156907 #18 ENSGT00940000163578.c #20 ENSGT00940000163578.d #20 ENSGT00940000157414 #21 ENSGT00940000157353 #22 ENSGT00390000015564.y #23 ENSGT00940000160659 #24 ENSGT00940000161270 #25 ENSGT00940000159435 #26 ENSGT00940000160385 #27 ENSGT00960000186656.a.a.a.a.a.b.db.b ENSGT00960000186656.a.a.a.a.a.b.db.a Mus ANCESTRAL SPECIES 7 ENSGT00390000002061 ENSGT00940000154530 ENSGT00940000160445 ENSGT00940000161845.a ENSGT00940000160340.c ENSGT00940000162398 ENSGT00940000154634.c #14 ENSGT00950000182808.b.a ENSGT00730000111180 #15 ENSGT00940000159257 #16 ENSGT00390000005651 #17 ENSGT00940000156907 #18 ENSGT00940000163578.c #20 ENSGT00940000163578.d #20 ENSGT00940000157414 #21 ENSGT00940000157353 #22 ENSGT00390000015564.y #23 ENSGT00940000160659 #24 ENSGT00940000161270 #25 ENSGT00940000159435 #26 ENSGT00940000160385 #27 ENSGT00960000186656.a.a.a.a.a.b.db.b ENSGT00960000186656.a.a.a.a.a.b.db.a ENSGT00940000158777 ENSGT00770000121214 ENSGT00940000162962 ENSGT00940000153141.B.b ENSGT00390000014100 ENSGT00950000183215.c.a.b ENSGT00940000157658 ENSGT00940000159294 Mus_A ANCESTRAL SPECIES 9 ENSGT00390000002061 ENSGT00940000154530.fb ENSGT00940000160445 ENSGT00940000161845.a ENSGT00940000160340.c ENSGT00940000162398 ENSGT00940000154634.c #14 ENSGT00950000182808.b.a ENSGT00730000111180 #15 ENSGT00940000159257 #16 ENSGT00390000005651 #17 ENSGT00940000156907 #18 ENSGT00940000163578.c #20 ENSGT00940000163578.d #20 ENSGT00940000157414 #21 ENSGT00940000157353 #22 ENSGT00390000015564.y #23 ENSGT00940000160659 #24 ENSGT00940000161270 #25 ENSGT00940000159435 #26 ENSGT00940000160385 #27 ENSGT00960000186656.a.a.a.a.a.b.db.b ENSGT00960000186656.a.a.a.a.a.b.db.a.a ENSGT00960000186656.a.a.a.a.a.b.db.a.b ENSGT00940000158777 ENSGT00770000121214 ENSGT00940000162962 ENSGT00940000153141.B.b ENSGT00390000014100 ENSGT00950000183215.c.a.b ENSGT00940000157658 Mus_B ANCESTRAL SPECIES 8 ENSGT00390000002061 ENSGT00940000154530.fb ENSGT00940000160445 ENSGT00940000161845.a ENSGT00940000160340.c ENSGT00940000162398 ENSGT00940000154634.c #14 ENSGT00950000182808.b.a ENSGT00730000111180 #15 ENSGT00940000159257 #16 ENSGT00390000005651 #17 ENSGT00940000156907 #18 ENSGT00940000163578.c #20 ENSGT00940000163578.d #20 ENSGT00940000157414 #21 ENSGT00940000157353 #22 ENSGT00390000015564.y #23 ENSGT00940000160659 #24 ENSGT00940000161270 #25 ENSGT00940000159435 #26 ENSGT00940000160385 #27 ENSGT00960000186656.a.a.a.a.a.b.db.b ENSGT00960000186656.a.a.a.a.a.b.db.a.a.b ENSGT00960000186656.a.a.a.a.a.b.db.a.b ENSGT00940000158777 ENSGT00770000121214 ENSGT00940000162962 ENSGT00940000153141.B.b ENSGT00390000014100 ENSGT00950000183215.c.a.b ENSGT00940000157658 Mus_C ANCESTRAL SPECIES 6 ENSGT00390000002061 ENSGT00940000154530.fb ENSGT00940000160445 ENSGT00940000161845.a ENSGT00940000160340.c ENSGT00940000162398 ENSGT00940000154634.c #14 ENSGT00950000182808.b.a ENSGT00730000111180 #15 ENSGT00940000159257 #16 ENSGT00390000005651 #17 ENSGT00940000156907 #18 ENSGT00940000163578.c #20 ENSGT00940000163578.d #20 ENSGT00940000157414 #21 ENSGT00940000157353 #22 ENSGT00390000015564.y #23 ENSGT00940000160659 #24 ENSGT00940000159435 #26 ENSGT00940000160385 #27 ENSGT00960000186656.a.a.a.a.a.b.db.b ENSGT00960000186656.a.a.a.a.a.b.db.a.a.b ENSGT00960000186656.a.a.a.a.a.b.db.a.b ENSGT00940000158777 ENSGT00770000121214 ENSGT00940000162962 ENSGT00940000153141.B.b ENSGT00390000014100 ENSGT00950000183215.c.a.b ENSGT00940000157658 ENSGT00940000159294 spretus MODERN SPECIES 12 Fabp5 (MGP_SPRETEiJ_G0025768) Pmp2 (MGP_SPRETEiJ_G0025769) MGP_SPRETEiJ_G0025770 Fabp9 (MGP_SPRETEiJ_G0025771) Fabp4 (MGP_SPRETEiJ_G0025772) Fabp12 (MGP_SPRETEiJ_G0025773) Impa1 (MGP_SPRETEiJ_G0025774) #14 MGP_SPRETEiJ_G0025775 Slc10a5 (MGP_SPRETEiJ_G0025776) Zfand1 (MGP_SPRETEiJ_G0025777) #15 Chmp4c (MGP_SPRETEiJ_G0025778) #16 Snx16 (MGP_SPRETEiJ_G0025779) #17 MGP_SPRETEiJ_G0025780 #18 Slc7a12 (MGP_SPRETEiJ_G0025781) #20 Lrrcc1 (MGP_SPRETEiJ_G0025782) #21 E2f5 (MGP_SPRETEiJ_G0025783) #22 Rbis (MGP_SPRETEiJ_G0025784) #23 Car13 (MGP_SPRETEiJ_G0025785) #24 Car3 (MGP_SPRETEiJ_G0025787) #26 Car2 (MGP_SPRETEiJ_G0025788) #27 Sirpd (MGP_SPRETEiJ_G0025789) MGP_SPRETEiJ_G0025792 MGP_SPRETEiJ_G0025791 MGP_SPRETEiJ_G0025793 Ythdf3 (MGP_SPRETEiJ_G0025794) Cypt12 (MGP_SPRETEiJ_G0025795) Bhlhe22 (MGP_SPRETEiJ_G0025796) Cyp7b1 (MGP_SPRETEiJ_G0025797) Armc1 (MGP_SPRETEiJ_G0025799) Mtfr1 (MGP_SPRETEiJ_G0025800) Pde7a (MGP_SPRETEiJ_G0025801) Mouse MODERN SPECIES 12 Pag1 (ENSMUSG00000027508) Fabp5 (ENSMUSG00000027533) Myef2l (ENSMUSG00000049230) Pmp2 (ENSMUSG00000052468) Fabp9 (ENSMUSG00000027528) Fabp4 (ENSMUSG00000062515) Fabp12 (ENSMUSG00000027530) Impa1 (ENSMUSG00000027531) #14 Slc10a5 (ENSMUSG00000058921) Zfand1 (ENSMUSG00000039795) #15 Chmp4c (ENSMUSG00000027536) #16 Snx16 (ENSMUSG00000027534) #17 Ralyl (ENSMUSG00000039717) #18 Slc7a12 (ENSMUSG00000039710) #20 Lrrcc1 (ENSMUSG00000027550) #21 E2f5 (ENSMUSG00000027552) #22 Rbis (ENSMUSG00000078784) #23 Car13 (ENSMUSG00000027555) #24 Car1 (ENSMUSG00000027556) #25 Car3 (ENSMUSG00000027559) #26 Car2 (ENSMUSG00000027562) #27 Sirpd (ENSMUSG00000078783) Sirpb1a (ENSMUSG00000095788) Sirpb1b (ENSMUSG00000095028) Sirpb1c (ENSMUSG00000074677) Gm5150 (ENSMUSG00000078780) Ythdf3 (ENSMUSG00000047213) Cypt12 (ENSMUSG00000027564) Bhlhe22 (ENSMUSG00000025128) Cyp7b1 (ENSMUSG00000039519) Armc1 (ENSMUSG00000027599) Ryukyu mouse MODERN SPECIES 12 Fabp5 (MGP_CAROLIEiJ_G0024838) Pmp2 (MGP_CAROLIEiJ_G0024839) MGP_CAROLIEiJ_G0024840 Fabp9 (MGP_CAROLIEiJ_G0024841) Fabp4 (MGP_CAROLIEiJ_G0024842) Fabp12 (MGP_CAROLIEiJ_G0024843) Impa1 (MGP_CAROLIEiJ_G0024844) #14 MGP_CAROLIEiJ_G0024845 Slc10a5 (MGP_CAROLIEiJ_G0024846) Zfand1 (MGP_CAROLIEiJ_G0024847) #15 Chmp4c (MGP_CAROLIEiJ_G0024848) #16 Snx16 (MGP_CAROLIEiJ_G0024849) #17 MGP_CAROLIEiJ_G0024850 #18 Slc7a12 (MGP_CAROLIEiJ_G0024851) #20 Lrrcc1 (MGP_CAROLIEiJ_G0024852) #21 E2f5 (MGP_CAROLIEiJ_G0024853) #22 Rbis (MGP_CAROLIEiJ_G0024854) #23 Car13 (MGP_CAROLIEiJ_G0024855) #24 Car3 (MGP_CAROLIEiJ_G0024857) #26 Car2 (MGP_CAROLIEiJ_G0024858) #27 Sirpd (MGP_CAROLIEiJ_G0024859) MGP_CAROLIEiJ_G0024860 MGP_CAROLIEiJ_G0024861 Ythdf3 (MGP_CAROLIEiJ_G0024863) MGP_CAROLIEiJ_G0024864 Cypt12 (MGP_CAROLIEiJ_G0024865) Bhlhe22 (MGP_CAROLIEiJ_G0024866) Cyp7b1 (MGP_CAROLIEiJ_G0024867) Armc1 (MGP_CAROLIEiJ_G0024868) Mtfr1 (MGP_CAROLIEiJ_G0024869) Pde7a (MGP_CAROLIEiJ_G0024870) Shrew mouse MODERN SPECIES 17 Pag1 (MGP_PahariEiJ_G0026285) Fabp5 (MGP_PahariEiJ_G0026286) Pmp2 (MGP_PahariEiJ_G0026287) MGP_PahariEiJ_G0026288 Fabp9 (MGP_PahariEiJ_G0026289) Fabp4 (MGP_PahariEiJ_G0026290) Fabp12 (MGP_PahariEiJ_G0026291) Impa1 (MGP_PahariEiJ_G0026292) #14 MGP_PahariEiJ_G0026293 Slc10a5 (MGP_PahariEiJ_G0026294) Zfand1 (MGP_PahariEiJ_G0026295) #15 Chmp4c (MGP_PahariEiJ_G0026296) #16 Snx16 (MGP_PahariEiJ_G0026297) #17 MGP_PahariEiJ_G0026298 #18 Slc7a12 (MGP_PahariEiJ_G0026299) #20 MGP_PahariEiJ_G0026300 #22 MGP_PahariEiJ_G0026301 #23 Car13 (MGP_PahariEiJ_G0026302) #24 MGP_PahariEiJ_G0026303 #25 Car3 (MGP_PahariEiJ_G0026304) #26 Car2 (MGP_PahariEiJ_G0026305) #27 Sirpd (MGP_PahariEiJ_G0026306) MGP_PahariEiJ_G0026307 MGP_PahariEiJ_G0026308 Ythdf3 (MGP_PahariEiJ_G0026310) MGP_PahariEiJ_G0026311 Bhlhe22 (MGP_PahariEiJ_G0026312) Cyp7b1 (MGP_PahariEiJ_G0026313) Armc1 (MGP_PahariEiJ_G0026314) Mtfr1 (MGP_PahariEiJ_G0026315) Pde7a (MGP_PahariEiJ_G0026316) Rat DUPLICATION Rat MODERN SPECIES 11 Fabp12 (ENSRNOG00000038825) Impa1 (ENSRNOG00000010482) #14 Zfand1 (ENSRNOG00000010342) #15 Slc10a5 (ENSRNOG00000067758) Chmp4c (ENSRNOG00000010238) #16 Snx16 (ENSRNOG00000009953) #17 Tgap1 (ENSRNOG00000022511) ENSRNOG00000069332 AABR07009260.1 (ENSRNOG00000030039) LOC100910852 (ENSRNOG00000051687) Ralyl (ENSRNOG00000011400) #18 ENSRNOG00000068087 LOC688389 (ENSRNOG00000028582) #20 Slc7a12 (ENSRNOG00000033830) #20 Lrrcc1 (ENSRNOG00000010891) #21 E2f5 (ENSRNOG00000010760) #22 Rbis (ENSRNOG00000064945) #23 AABR07011733.1 (ENSRNOG00000061317) Car13 (ENSRNOG00000021323) #24 Car1 (ENSRNOG00000010698) #25 Car3 (ENSRNOG00000010079) #26 Car2 (ENSRNOG00000009629) #27 ENSRNOG00000031320 ENSRNOG00000064861 AABR07008876.1 (ENSRNOG00000053292) LOC100909964 (ENSRNOG00000046941) Sirpal1 (ENSRNOG00000031024) Sirpb2 (ENSRNOG00000032580) LOC100909964 (ENSRNOG00000043478) ENSRNOG00000064528 ENSRNOG00000067567 Rat MODERN SPECIES Aurkc (ENSRNOG00000015825) LOC102547412 (ENSRNOG00000059513) Zfp954 (ENSRNOG00000022742) Zfp773-ps1 (ENSRNOG00000047061) Zfp772 (ENSRNOG00000015598) ENSRNOG00000062946 LOC691135 (ENSRNOG00000066094) Zfp418 (ENSRNOG00000015271) Vom2r28 (ENSRNOG00000002641) Dcun1d3 (ENSRNOG00000014037) Vom2r-ps45 (ENSRNOG00000009146) Vom1r31 (ENSRNOG00000068723) Nlrp4f (ENSRNOG00000027705) Nlrp4a (ENSRNOG00000042030) Vom2r27 (ENSRNOG00000048635) ENSRNOG00000067618 #22 LOC292543 (ENSRNOG00000054438) Nlrp12 (ENSRNOG00000060745) Or6al2 (ENSRNOG00000063370) LOC103689958 (ENSRNOG00000066405) Or6al1 (ENSRNOG00000066178) ENSRNOG00000063395 Myadm (ENSRNOG00000053450) Prkcg (ENSRNOG00000054371) Cacng7 (ENSRNOG00000056257) Cacng8 (ENSRNOG00000057848) Cacng6 (ENSRNOG00000063051) Vstm1 (ENSRNOG00000070245) Tarm1 (ENSRNOG00000055581) LOC100359972 (ENSRNOG00000055796) Oscar (ENSRNOG00000055716) Upper Galilee mountains blind mole rat MODERN SPECIES 432 Chmp4c (ENSNGAG00000010118) #16 Snx16 (ENSNGAG00000016484) #17 Ralyl (ENSNGAG00000013375) #18 Lrrcc1 (ENSNGAG00000006318) #21 E2f5 (ENSNGAG00000010521) #22 ENSNGAG00000015888 #23 Car13 (ENSNGAG00000009528) #24 Car1 (ENSNGAG00000024045) #25 Car3 (ENSNGAG00000008726) #26 Car2 (ENSNGAG00000023076) #27 ENSNGAG00000023109 Lesser Egyptian jerboa DUPLICATION Lesser Egyptian jerboa MODERN SPECIES 61 Hey1 (ENSJJAG00000021802) Mrps28 (ENSJJAG00000023759) Tpd52 (ENSJJAG00000016461) ENSJJAG00000001440 ENSJJAG00000011372 ENSJJAG00000012220 Pmp2 (ENSJJAG00000020756) Fabp9 (ENSJJAG00000013922) Fabp4 (ENSJJAG00000020837) Fabp12 (ENSJJAG00000021730) Impa1 (ENSJJAG00000023670) #14 Zfand1 (ENSJJAG00000012779) #15 Chmp4c (ENSJJAG00000019647) #16 Snx16 (ENSJJAG00000022898) #17 Lrrcc1 (ENSJJAG00000002670) #21 ENSJJAG00000019403 #22 Rbis (ENSJJAG00000016669) #23 Car13 (ENSJJAG00000017058) #24 ENSJJAG00000018311 Car1 (ENSJJAG00000019279) #25 Car3 (ENSJJAG00000024163) #26 Car2 (ENSJJAG00000001991) #27 Atp6v0d2 (ENSJJAG00000014601) #29 Wwp1 (ENSJJAG00000017921) #32 Cpne3 (ENSJJAG00000012544) #34 Cngb3 (ENSJJAG00000000887) #35 ENSJJAG00000015631 Ripk2 (ENSJJAG00000011914) Osgin2 (ENSJJAG00000016252) Nbn (ENSJJAG00000018109) Calb1 (ENSJJAG00000009685) Lesser Egyptian jerboa MODERN SPECIES 124 Chst7 (ENSJJAG00000013054) ENSJJAG00000011130 ENSJJAG00000010953 ENSJJAG00000009800 Dipk2b (ENSJJAG00000009786) Kdm6a (ENSJJAG00000016122) ENSJJAG00000013443 ENSJJAG00000013961 Efhc2 (ENSJJAG00000013365) Ndp (ENSJJAG00000013001) Maob (ENSJJAG00000012262) Maoa (ENSJJAG00000011331) ENSJJAG00000010951 ENSJJAG00000010745 ENSJJAG00000010651 ENSJJAG00000010094 #22 Gpr34 (ENSJJAG00000013331) Cask (ENSJJAG00000022808) Nyx (ENSJJAG00000020005) Ddx3x (ENSJJAG00000019645) Usp9x (ENSJJAG00000023449) E330021D16Rik (ENSJJAG00000013240) Med14 (ENSJJAG00000020727) 1810030O07Rik (ENSJJAG00000019402) ENSJJAG00000019088 Bcor (ENSJJAG00000018755) Mid1ip1 (ENSJJAG00000013196) ENSJJAG00000018161 Tspan7 (ENSJJAG00000017974) Otc (ENSJJAG00000017566) Rpgr (ENSJJAG00000014640) Kangaroo rat MODERN SPECIES 336 Tpd52 (ENSDORG00000002764) Zbtb10 (ENSDORG00000001337) Zfp704 (ENSDORG00000001781) Pag1 (ENSDORG00000027622) Fabp5 (ENSDORG00000025632) Pmp2 (ENSDORG00000002229) Fabp9 (ENSDORG00000002230) Fabp4 (ENSDORG00000002231) Fabp12 (ENSDORG00000008181) Impa1 (ENSDORG00000016477) #14 Zfand1 (ENSDORG00000016480) #15 Chmp4c (ENSDORG00000025589) #16 Snx16 (ENSDORG00000002080) #17 Ralyl (ENSDORG00000003721) #18 Lrrcc1 (ENSDORG00000016040) #21 E2f5 (ENSDORG00000011212) #22 Rbis (ENSDORG00000011213) #23 Car13 (ENSDORG00000004299) #24 Car1 (ENSDORG00000008351) #25 Car3 (ENSDORG00000001002) #26 Car2 (ENSDORG00000025726) #27 ENSDORG00000007971 #28 Atp6v0d2 (ENSDORG00000016038) #29 ENSDORG00000015605 #32 Rmdn1 (ENSDORG00000015606) #33 Cpne3 (ENSDORG00000000949) #34 ENSDORG00000028023 Cngb3 (ENSDORG00000008524) #35 Mmp16 (ENSDORG00000000461) #37 Ripk2 (ENSDORG00000002598) Osgin2 (ENSDORG00000025748) Lagomorpha ANCESTRAL SPECIES 20 ENSGT00390000001057 ENSGT00940000155294 ENSGT00940000157988 ENSGT00940000156172.b ENSGT00390000002061 ENSGT00940000154530 ENSGT00940000160445 ENSGT00940000161845 ENSGT00940000162398 ENSGT00940000154634.c #14 ENSGT00950000182808.b.a ENSGT00730000111180 #15 ENSGT00940000159257 #16 ENSGT00390000005651 #17 ENSGT00940000157414 #21 ENSGT00940000157353 #22 ENSGT00390000015564 #23 ENSGT00940000160659 #24 ENSGT00940000161270.e #25 ENSGT00940000161270.f #25 ENSGT00940000159435 #26 ENSGT00940000160385 #27 ENSGT00940000162917 #28 ENSGT00390000002200.a.b #29 ENSGT00940000162798 #30 ENSGT00940000154635.a #32 ENSGT00950000182992.a.b.b #33 ENSGT00940000154968 #34 ENSGT00940000154824.a #35 ENSGT00390000001688 #36 ENSGT00940000157532 #37 Rabbit MODERN SPECIES 14 PAG1 (ENSOCUG00000014767) FABP5 (ENSOCUG00000010425) ENSOCUG00000007445 FABP12 (ENSOCUG00000013189) SNX16 (ENSOCUG00000023666) #17 ENSOCUG00000035758 IMPA1 (ENSOCUG00000014535) #14 CHMP4C (ENSOCUG00000006847) #16 ENSOCUG00000023213 RALYL (ENSOCUG00000025694) #18 ENSOCUG00000032856 ENSOCUG00000024529 ENSOCUG00000026096 LRRCC1 (ENSOCUG00000014653) #21 ENSOCUG00000031215 ENSOCUG00000012890 #22 ENSOCUG00000024948 #23 CA13 (ENSOCUG00000007328) #24 ENSOCUG00000005039 #25 ENSOCUG00000035812 #25 CA3 (ENSOCUG00000011736) #26 CA2 (ENSOCUG00000011742) #27 ATP6V0D2 (ENSOCUG00000010247) #29 PSKH2 (ENSOCUG00000003992) #28 ENSOCUG00000026370 SLC7A13 (ENSOCUG00000017971) #30 WWP1 (ENSOCUG00000001081) #32 RMDN1 (ENSOCUG00000001086) #33 CPNE3 (ENSOCUG00000017961) #34 CNGB3 (ENSOCUG00000017962) #35 CNBD1 (ENSOCUG00000029386) #36 Pika MODERN SPECIES 1219 E2F5 (ENSOPRG00000013545) #22 ENSOPRG00000013576 Tree shrew MODERN SPECIES 1508 LRRCC1 (ENSTBEG00000001996) #21 E2F5 (ENSTBEG00000003360) #22 CA13 (ENSTBEG00000004374) #24 CA1 (ENSTBEG00000004632) #25