Tetrapoda	ANCESTRAL SPECIES	125										ENSGT00940000157041.a #15	ENSGT00530000063853.a.b #16	ENSGT00510000047791 #17	ENSGT00960000189770	ENSGT00390000003044 #20	ENSGT00940000165060	ENSGT00940000158257 #22	ENSGT00940000156501 #23	ENSGT00950000183211.a.a.b #26	ENSGT00390000004877 #27	ENSGT00940000161003 #28	ENSGT00940000156672 #29	ENSGT00940000153717.b #30	ENSGT00940000158111	ENSGT00940000162986.q.a	ENSGT00390000015366	ENSGT00940000155010	ENSGT00940000157942	ENSGT01030000234618.A	ENSGT00940000162746	ENSGT00940000156704	ENSGT00400000022326
Amniota	ANCESTRAL SPECIES	25								ENSGT00940000154494.b #14	ENSGT00940000157041.a #15	ENSGT00530000063853.a.b #16	ENSGT00510000047791 #17	ENSGT00510000047030 #18	ENSGT00390000006585 #19	ENSGT00390000003044 #20	ENSGT00390000018598 #21	ENSGT00940000158257 #22	ENSGT00940000156501 #23	ENSGT00390000011138 #24	ENSGT00940000153866.B #25	ENSGT00950000183211.a.a.b #26	ENSGT00390000004877 #27	ENSGT00940000161003 #28	ENSGT00940000156672 #29	ENSGT00940000153717.b #30	ENSGT00940000163363	ENSGT00940000162986.q.a	ENSGT00390000015366	ENSGT00940000155010	ENSGT00940000157942	ENSGT01030000234618.A	ENSGT00390000005351
Mammalia	ANCESTRAL SPECIES	13	ENSGT00550000075019	ENSGT00940000160211 #9	ENSGT01030000235333	ENSGT00940000157672 #11	ENSGT00940000160052 #12	ENSGT00940000161047 #13	ENSGT00940000154494.b #14	ENSGT00940000157041.a #15	ENSGT00530000063853.a.b #16	ENSGT00510000047791 #17	ENSGT00510000047030 #18	ENSGT00390000006585 #19	ENSGT00390000003044 #20	ENSGT00940000165060	ENSGT00390000018598 #21	ENSGT00940000158257 #22	ENSGT00940000156501 #23	ENSGT00390000011138 #24	ENSGT00940000153866.B #25	ENSGT00950000183211.a.a.b #26	ENSGT00390000004877 #27	ENSGT00940000161003 #28	ENSGT00940000156672 #29	ENSGT00940000153717.b #30	ENSGT00940000163363	ENSGT00940000154258.b #31	ENSGT00390000002200.a.a #32	ENSGT00940000159716 #33	ENSGT00940000159191 #34	ENSGT00940000153875.d.b #35	ENSGT00530000063884.b #36
Theria	ANCESTRAL SPECIES	17	ENSGT00940000161738	ENSGT00740000117161	ENSGT00940000160211 #9	ENSGT01030000235333	ENSGT00940000157672 #11	ENSGT00940000160052 #12	ENSGT00940000161047 #13	ENSGT00940000154494.b #14	ENSGT00940000157041.a #15	ENSGT00530000063853.a.b #16	ENSGT00510000047791 #17	ENSGT00510000047030 #18	ENSGT00390000006585 #19	ENSGT00390000003044 #20	ENSGT00390000018598 #21	ENSGT00940000158257 #22	ENSGT00940000156501 #23	ENSGT00390000011138 #24	ENSGT00940000153866.B #25	ENSGT00950000183211.a.a.b #26	ENSGT00390000004877 #27	ENSGT00940000161003 #28	ENSGT00940000156672 #29	ENSGT00940000153717.b #30	ENSGT00940000163363	ENSGT00940000154258.b #31	ENSGT00390000002200.a.a #32	ENSGT00940000159716 #33	ENSGT00940000159191 #34	ENSGT00940000153875.d.b #35	ENSGT00530000063884.b #36
Eutheria	ANCESTRAL SPECIES	19	ENSGT00940000161738	ENSGT00740000117161	ENSGT00940000160211 #9	ENSGT00940000162331 #10	ENSGT00940000157672 #11	ENSGT00940000160052 #12	ENSGT00940000161047 #13	ENSGT00940000154494.b #14	ENSGT00940000157041.a #15	ENSGT00530000063853.a.b #16	ENSGT00510000047791 #17	ENSGT00510000047030 #18	ENSGT00390000006585 #19	ENSGT00390000003044 #20	ENSGT00390000018598 #21	ENSGT00940000158257 #22	ENSGT00940000156501 #23	ENSGT00390000011138 #24	ENSGT00940000153866.B #25	ENSGT00950000183211.a.a.b #26	ENSGT00390000004877 #27	ENSGT00940000161003 #28	ENSGT00940000156672 #29	ENSGT00940000153717.b #30	ENSGT00940000154258.b #31	ENSGT00390000002200.a.a #32	ENSGT00940000159716 #33	ENSGT00940000159191 #34	ENSGT00940000153875.d.b #35	ENSGT00530000063884.b #36	ENSGT00390000007606 #37
Boreoeutheria	ANCESTRAL SPECIES	5	ENSGT00940000161738	ENSGT00740000117161	ENSGT00940000160211 #9	ENSGT00940000162331 #10	ENSGT00940000157672 #11	ENSGT00940000160052 #12	ENSGT00940000161047 #13	ENSGT00940000154494.b #14	ENSGT00940000157041.a #15	ENSGT00530000063853.a.b #16	ENSGT00510000047791 #17	ENSGT00510000047030 #18	ENSGT00390000006585 #19	ENSGT00390000003044 #20	ENSGT00390000018598 #21	ENSGT00940000158257 #22	ENSGT00940000156501 #23	ENSGT00390000011138 #24	ENSGT00940000153866.B #25	ENSGT00950000183211.a.a.b #26	ENSGT00390000004877 #27	ENSGT00940000161003 #28	ENSGT00940000156672 #29	ENSGT00940000153717.b #30	ENSGT00940000154258.b #31	ENSGT00390000002200.a.a #32	ENSGT00940000159716 #33	ENSGT00940000159191 #34	ENSGT00940000153875.d.b #35	ENSGT00530000063884.b #36	ENSGT00390000007606 #37
Euarchontoglires	ANCESTRAL SPECIES	5	ENSGT00940000161738	ENSGT00740000117161	ENSGT00940000160211 #9	ENSGT00940000162331 #10	ENSGT00940000157672 #11	ENSGT00940000160052 #12	ENSGT00940000161047 #13	ENSGT00940000154494.b #14	ENSGT00940000157041.a #15	ENSGT00530000063853.a.b #16	ENSGT00510000047791 #17	ENSGT00510000047030 #18	ENSGT00390000006585 #19	ENSGT00390000003044 #20	ENSGT00390000018598 #21	ENSGT00940000158257 #22	ENSGT00940000156501 #23	ENSGT00390000011138 #24	ENSGT00940000153866.B #25	ENSGT00950000183211.a.a.b #26	ENSGT00390000004877 #27	ENSGT00940000161003 #28	ENSGT00940000156672 #29	ENSGT00940000153717.b #30	ENSGT00940000154258.b #31	ENSGT00390000002200.a.a #32	ENSGT00940000159716 #33	ENSGT00940000159191 #34	ENSGT00940000153875.d.b #35	ENSGT00530000063884.b #36	ENSGT00390000007606 #37
Primates	ANCESTRAL SPECIES	21	ENSGT00940000161738	ENSGT00740000117161	ENSGT00940000160211 #9	ENSGT00940000162331 #10	ENSGT00940000157672 #11	ENSGT00940000160052 #12	ENSGT00940000161047 #13	ENSGT00940000154494.b #14	ENSGT00940000157041.a #15	ENSGT00530000063853.a.b #16	ENSGT00510000047791 #17	ENSGT00510000047030 #18	ENSGT00390000006585 #19	ENSGT00390000003044 #20	ENSGT00390000018598 #21	ENSGT00940000158257 #22	ENSGT00940000156501 #23	ENSGT00390000011138 #24	ENSGT00940000153866.B #25	ENSGT00950000183211.a.a.b #26	ENSGT00390000004877 #27	ENSGT00940000161003 #28	ENSGT00940000156672 #29	ENSGT00940000153717.b #30	ENSGT00940000154258.b #31	ENSGT00390000002200.a.a #32	ENSGT00940000159716 #33	ENSGT00940000159191 #34	ENSGT00940000153875.d.b #35	ENSGT00530000063884.b #36	ENSGT00390000007606 #37
Haplorrhini	ANCESTRAL SPECIES	21	ENSGT00940000161738	ENSGT00740000117161	ENSGT00940000160211 #9	ENSGT00940000162331 #10	ENSGT00940000157672 #11	ENSGT00940000160052 #12	ENSGT00940000161047 #13	ENSGT00940000154494.b #14	ENSGT00940000157041.a #15	ENSGT00530000063853.a.b #16	ENSGT00510000047791 #17	ENSGT00510000047030 #18	ENSGT00390000006585 #19	ENSGT00390000003044 #20	ENSGT00390000018598 #21	ENSGT00940000158257 #22	ENSGT00940000156501 #23	ENSGT00390000011138 #24	ENSGT00940000153866.B #25	ENSGT00950000183211.a.a.b #26	ENSGT00390000004877 #27	ENSGT00940000161003 #28	ENSGT00940000156672 #29	ENSGT00940000153717.b #30	ENSGT00940000154258.b #31	ENSGT00390000002200.a.a #32	ENSGT00940000159716 #33	ENSGT00940000159191 #34	ENSGT00940000153875.d.b #35	ENSGT00530000063884.b #36	ENSGT00390000007606 #37
Simiiformes	ANCESTRAL SPECIES	21	ENSGT00940000161738	ENSGT00740000117161	ENSGT00940000160211 #9	ENSGT00940000162331 #10	ENSGT00940000157672 #11	ENSGT00940000160052 #12	ENSGT00940000161047 #13	ENSGT00940000154494.b #14	ENSGT00940000157041.a #15	ENSGT00530000063853.a.b #16	ENSGT00510000047791 #17	ENSGT00510000047030.xb.b #18	ENSGT00390000006585 #19	ENSGT00390000003044 #20	ENSGT00390000018598 #21	ENSGT00940000158257 #22	ENSGT00940000156501 #23	ENSGT00390000011138 #24	ENSGT00940000153866.B #25	ENSGT00950000183211.a.a.b #26	ENSGT00390000004877 #27	ENSGT00940000161003 #28	ENSGT00940000156672 #29	ENSGT00940000153717.b #30	ENSGT00940000154258.b #31	ENSGT00390000002200.a.a #32	ENSGT00940000159716 #33	ENSGT00940000159191 #34	ENSGT00940000153875.d.b #35	ENSGT00530000063884.b #36	ENSGT00390000007606 #37
Platyrrhini	ANCESTRAL SPECIES	21	ENSGT00550000075019	ENSGT00740000117161	ENSGT00940000160211 #9	ENSGT00940000162331 #10	ENSGT00940000157672 #11	ENSGT00940000160052 #12	ENSGT00940000161047 #13	ENSGT00940000154494.b #14	ENSGT00940000157041.a #15	ENSGT00530000063853.a.b #16	ENSGT00510000047791 #17	ENSGT00510000047030.xb.b.b.a.a #18	ENSGT00390000006585 #19	ENSGT00390000003044 #20	ENSGT00390000018598 #21	ENSGT00940000158257 #22	ENSGT00940000156501 #23	ENSGT00390000011138 #24	ENSGT00940000153866.B #25	ENSGT00950000183211.a.a.b #26	ENSGT00390000004877 #27	ENSGT00940000161003 #28	ENSGT00940000156672 #29	ENSGT00940000153717.b #30	ENSGT00940000154258.b #31	ENSGT00390000002200.a.a #32	ENSGT00940000159716 #33	ENSGT00940000159191 #34	ENSGT00940000153875.d.b #35	ENSGT00530000063884.b #36	ENSGT00390000007606 #37
Mas night monkey	MODERN SPECIES	1135			DPEP2 (ENSANAG00000031519) #9	DPEP3 (ENSANAG00000033881) #10	SLC12A4 (ENSANAG00000022088) #11	LCAT (ENSANAG00000021712) #12	PSMB10 (ENSANAG00000033558) #13	CTRL (ENSANAG00000002408) #14	PSKH1 (ENSANAG00000022068) #15	NRN1L (ENSANAG00000019324) #16	EDC4 (ENSANAG00000028400) #17	ENSANAG00000024931 #18	THAP11 (ENSANAG00000019271) #19	CENPT (ENSANAG00000033134) #20	TSNAXIP1 (ENSANAG00000030908) #21	RANBP10 (ENSANAG00000023548) #22	GFOD2 (ENSANAG00000030868) #23	C16orf86 (ENSANAG00000028908) #24	ENKD1 (ENSANAG00000021847) #25	PARD6A (ENSANAG00000029284) #26	ACD (ENSANAG00000033228) #27	CARMIL2 (ENSANAG00000032350) #28	CTCF (ENSANAG00000027330) #29	RIPOR1 (ENSANAG00000035037) #30	AGRP (ENSANAG00000025594) #31	ATP6V0D1 (ENSANAG00000024349) #32	HSD11B2 (ENSANAG00000031199) #33	ZDHHC1 (ENSANAG00000028213) #34	TPPP3 (ENSANAG00000024244) #35	LRRC36 (ENSANAG00000038452) #36	KCTD19 (ENSANAG00000021622) #37
Cebidae	ANCESTRAL SPECIES	21	ENSGT00550000075019	ENSGT00740000117161	ENSGT00940000160211 #9	ENSGT00940000162331 #10	ENSGT00940000157672 #11	ENSGT00940000160052 #12	ENSGT00940000161047 #13	ENSGT00940000154494.b #14	ENSGT00940000157041.a #15	ENSGT00530000063853.a.b #16	ENSGT00510000047791 #17	ENSGT00510000047030.xb.b.b.a.a #18	ENSGT00510000047030.xb.b.b.a.b ##18	ENSGT00390000003044 #20	ENSGT00390000018598 #21	ENSGT00940000158257 #22	ENSGT00940000156501 #23	ENSGT00390000011138 #24	ENSGT00940000153866.B #25	ENSGT00950000183211.a.a.b #26	ENSGT00390000004877 #27	ENSGT00940000161003 #28	ENSGT00940000156672 #29	ENSGT00940000153717.b #30	ENSGT00940000154258.b #31	ENSGT00390000002200.a.a #32	ENSGT00940000159716 #33	ENSGT00940000159191 #34	ENSGT00940000153875.d.b #35	ENSGT00530000063884.b #36	ENSGT00390000007606 #37
Marmoset	MODERN SPECIES	12	NFATC3 (ENSCJAG00000015726)	DUS2 (ENSCJAG00000015797)	DPEP2NB (ENSCJAG00000040070)	DPEP2 (ENSCJAG00000015850) #9	DPEP3 (ENSCJAG00000015864) #10	SLC12A4 (ENSCJAG00000015875) #11	LCAT (ENSCJAG00000083596) #12	PSMB10 (ENSCJAG00000053823) #13	CTRL (ENSCJAG00000015948) #14	PSKH1 (ENSCJAG00000015958) #15	NRN1L (ENSCJAG00000015962) #16	EDC4 (ENSCJAG00000015963) #17	ENSCJAG00000058246 #18	CENPT (ENSCJAG00000016022) #20	TSNAXIP1 (ENSCJAG00000016035) #21	RANBP10 (ENSCJAG00000016055) #22	GFOD2 (ENSCJAG00000016078) #23	C16orf86 (ENSCJAG00000016084) #24	ENKD1 (ENSCJAG00000016088) #25	PARD6A (ENSCJAG00000016098) #26	ACD (ENSCJAG00000016106) #27	CARMIL2 (ENSCJAG00000016125) #28	CTCF (ENSCJAG00000016139) #29	RIPOR1 (ENSCJAG00000016148) #30	AGRP (ENSCJAG00000016184) #31	ATP6V0D1 (ENSCJAG00000016190) #32	HSD11B2 (ENSCJAG00000016198) #33	ZDHHC1 (ENSCJAG00000016204) #34	TPPP3 (ENSCJAG00000042043) #35	LRRC36 (ENSCJAG00000016213) #36	KCTD19 (ENSCJAG00000016220) #37
Cebidae_a	ANCESTRAL SPECIES	37	ENSGT00940000156131.a.b	ENSGT00550000075019	ENSGT00740000117161	ENSGT00940000160211 #9	ENSGT00940000162331 #10	ENSGT00940000157672 #11	ENSGT00940000160052 #12	ENSGT00940000161047 #13	ENSGT00940000154494.b #14	ENSGT00940000157041.a #15	ENSGT00530000063853.a.b #16	ENSGT00510000047791 #17	ENSGT00510000047030.xb.b.b.a.b ##18	ENSGT00390000003044 #20	ENSGT00390000018598 #21	ENSGT00940000158257 #22	ENSGT00940000156501 #23	ENSGT00390000011138 #24	ENSGT00940000153866.B #25	ENSGT00950000183211.a.a.b #26	ENSGT00390000004877 #27	ENSGT00940000161003 #28	ENSGT00940000156672 #29	ENSGT00940000153717.b #30	ENSGT00940000154258.b #31	ENSGT00390000002200.a.a #32	ENSGT00940000159716 #33	ENSGT00940000159191 #34	ENSGT00940000153875.d.b #35	ENSGT00530000063884.b #36	ENSGT00390000007606 #37
Bolivian squirrel monkey	MODERN SPECIES	125	ENSSBOG00000023477	NFATC3 (ENSSBOG00000027928)	DUS2 (ENSSBOG00000028381)	DPEP2NB (ENSSBOG00000034446)	DPEP2 (ENSSBOG00000031002) #9	ENSSBOG00000030602 #9	SLC12A4 (ENSSBOG00000022148) #11	LCAT (ENSSBOG00000026635) #12	PSMB10 (ENSSBOG00000031106) #13	CTRL (ENSSBOG00000022425) #14	PSKH1 (ENSSBOG00000017590) #15	EDC4 (ENSSBOG00000024991) #17	ENSSBOG00000031335 ##18	CENPT (ENSSBOG00000025770) #20	TSNAXIP1 (ENSSBOG00000029014) #21	RANBP10 (ENSSBOG00000032023) #22	GFOD2 (ENSSBOG00000000176) #23	C16orf86 (ENSSBOG00000029131) #24	ENKD1 (ENSSBOG00000011446) #25	PARD6A (ENSSBOG00000032214) #26	ACD (ENSSBOG00000030006) #27	CARMIL2 (ENSSBOG00000024510) #28	CTCF (ENSSBOG00000030958) #29	RIPOR1 (ENSSBOG00000019007) #30	AGRP (ENSSBOG00000028971) #31	ATP6V0D1 (ENSSBOG00000023987) #32	HSD11B2 (ENSSBOG00000020734) #33	ZDHHC1 (ENSSBOG00000024750) #34	TPPP3 (ENSSBOG00000027473) #35	LRRC36 (ENSSBOG00000018750) #36	KCTD19 (ENSSBOG00000035579) #37
Capuchin	MODERN SPECIES	118	NFATC3 (ENSCCAG00000035073)	DUS2 (ENSCCAG00000000046)	DPEP2NB (ENSCCAG00000031495)	DPEP2 (ENSCCAG00000033465) #9	DPEP3 (ENSCCAG00000020424) #10	SLC12A4 (ENSCCAG00000026252) #11	LCAT (ENSCCAG00000029926) #12	PSMB10 (ENSCCAG00000029020) #13	CTRL (ENSCCAG00000031076) #14	PSKH1 (ENSCCAG00000021806) #15	NRN1L (ENSCCAG00000020062) #16	EDC4 (ENSCCAG00000032888) #17	NUTF2 (ENSCCAG00000027242) ##18	CENPT (ENSCCAG00000031335) #20	TSNAXIP1 (ENSCCAG00000022033) #21	RANBP10 (ENSCCAG00000033536) #22	GFOD2 (ENSCCAG00000037458) #23	C16orf86 (ENSCCAG00000022817) #24	ENKD1 (ENSCCAG00000020327) #25	PARD6A (ENSCCAG00000033703) #26	ACD (ENSCCAG00000023258) #27	CARMIL2 (ENSCCAG00000030007) #28	CTCF (ENSCCAG00000002203) #29	RIPOR1 (ENSCCAG00000029187) #30	ENSCCAG00000024362	AGRP (ENSCCAG00000026443) #31	ATP6V0D1 (ENSCCAG00000033213) #32	HSD11B2 (ENSCCAG00000032222) #33	ZDHHC1 (ENSCCAG00000024396) #34	TPPP3 (ENSCCAG00000026155) #35	LRRC36 (ENSCCAG00000032482) #36
Catarrhini	ANCESTRAL SPECIES	11	ENSGT00940000161738	ENSGT00740000117161	ENSGT00940000160211 #9	ENSGT00940000162331 #10	ENSGT00940000157672 #11	ENSGT00940000160052 #12	ENSGT00940000161047 #13	ENSGT00940000154494.b #14	ENSGT00940000157041.a #15	ENSGT00530000063853.a.b #16	ENSGT00510000047791 #17	ENSGT00510000047030.xb.b #18	ENSGT00390000006585 #19	ENSGT00390000003044 #20	ENSGT00390000018598 #21	ENSGT00940000158257 #22	ENSGT00940000156501 #23	ENSGT00390000011138 #24	ENSGT00940000153866.B #25	ENSGT00950000183211.a.a.b #26	ENSGT00390000004877 #27	ENSGT00940000161003 #28	ENSGT00940000156672 #29	ENSGT00940000153717.b #30	ENSGT00940000154258.b #31	ENSGT00390000002200.a.a #32	ENSGT00910000147085	ENSGT00940000159716 #33	ENSGT00940000159191 #34	ENSGT00940000153875.d.b #35	ENSGT00530000063884.b #36
Cercopithecidae	ANCESTRAL SPECIES	8	ENSGT00940000161738	ENSGT00740000117161	ENSGT00940000160211 #9	ENSGT00940000162331 #10	ENSGT00940000157672 #11	ENSGT00940000160052 #12	ENSGT00940000161047 #13	ENSGT00940000154494.b #14	ENSGT00940000157041.a #15	ENSGT00530000063853.a.b #16	ENSGT00510000047791 #17	ENSGT00510000047030.xb.b #18	ENSGT00390000006585 #19	ENSGT00390000003044 #20	ENSGT00390000018598 #21	ENSGT00940000158257 #22	ENSGT00940000156501 #23	ENSGT00390000011138 #24	ENSGT00940000153866.B #25	ENSGT00950000183211.a.a.b #26	ENSGT00390000004877 #27	ENSGT00940000161003 #28	ENSGT00940000156672 #29	ENSGT00940000153717.b #30	ENSGT00940000154258.b #31	ENSGT00390000002200.a.a #32	ENSGT00910000147085	ENSGT00940000159716 #33	ENSGT00940000159191 #34	ENSGT00940000153875.d.b #35	ENSGT00530000063884.b #36
Cercopithecinae	ANCESTRAL SPECIES	10	ENSGT00940000161738	ENSGT00740000117161	ENSGT00940000160211 #9	ENSGT00940000162331 #10	ENSGT00940000157672 #11	ENSGT00940000160052 #12	ENSGT00940000161047 #13	ENSGT00940000154494.b #14	ENSGT00940000157041.a #15	ENSGT00530000063853.a.b #16	ENSGT00510000047791 #17	ENSGT00510000047030.xb.b #18	ENSGT00390000006585 #19	ENSGT00390000003044 #20	ENSGT00390000018598 #21	ENSGT00940000158257 #22	ENSGT00940000156501 #23	ENSGT00390000011138 #24	ENSGT00940000153866.B #25	ENSGT00950000183211.a.a.b #26	ENSGT00390000004877 #27	ENSGT00940000161003 #28	ENSGT00940000156672 #29	ENSGT00940000153717.b #30	ENSGT00940000154258.b #31	ENSGT00390000002200.a.a #32	ENSGT00910000147085	ENSGT00940000159716 #33	ENSGT00940000159191 #34	ENSGT00940000153875.d.b #35	ENSGT00530000063884.b #36
Vervet Monkey	MODERN SPECIES	203	OPHN1 (ENSCSAG00000011894)	AR (ENSCSAG00000011902)	ENSCSAG00000000111	EDA2R (ENSCSAG00000011908)	HEPH (ENSCSAG00000011935)	VSIG4 (ENSCSAG00000011941)	MSN (ENSCSAG00000011947)	LAS1L (ENSCSAG00000011953)	ENSCSAG00000011955	ZC4H2 (ENSCSAG00000011958)	MTMR8 (ENSCSAG00000012035)	ASB12 (ENSCSAG00000012044)	AMER1 (ENSCSAG00000000112)	ARHGEF9 (ENSCSAG00000012051)	SPIN4 (ENSCSAG00000000113)	ENSCSAG00000000114 #22	FAAH2 (ENSCSAG00000012061)	ENSCSAG00000000115	ENSCSAG00000012068	ENSCSAG00000000116	SPIN3 (ENSCSAG00000000117)	UBQLN2 (ENSCSAG00000000118)	KLF8 (ENSCSAG00000012078)	ENSCSAG00000000119	RRAGB (ENSCSAG00000012089)	FOXR2 (ENSCSAG00000000120)	ENSCSAG00000000121	USP51 (ENSCSAG00000000122)	MAGEH1 (ENSCSAG00000000123)	ENSCSAG00000012094	PAGE3 (ENSCSAG00000012096)
Cercopithecinae_a	ANCESTRAL SPECIES	10	ENSGT00940000161738	ENSGT00740000117161	ENSGT00940000160211 #9	ENSGT00940000162331 #10	ENSGT00940000157672 #11	ENSGT00940000160052 #12	ENSGT00940000161047 #13	ENSGT00940000154494.b #14	ENSGT00940000157041.a #15	ENSGT00530000063853.a.b #16	ENSGT00510000047791 #17	ENSGT00510000047030.xb.b.e.b #18	ENSGT00390000006585 #19	ENSGT00390000003044 #20	ENSGT00390000018598 #21	ENSGT00940000158257 #22	ENSGT00940000156501 #23	ENSGT00390000011138 #24	ENSGT00940000153866.B #25	ENSGT00950000183211.a.a.b #26	ENSGT00390000004877 #27	ENSGT00940000161003 #28	ENSGT00940000156672 #29	ENSGT00940000153717.b #30	ENSGT00940000154258.b #31	ENSGT00390000002200.a.a #32	ENSGT00910000147085	ENSGT00940000159716 #33	ENSGT00940000159191 #34	ENSGT00940000153875.d.b #35	ENSGT00530000063884.b #36
Macaca	ANCESTRAL SPECIES	8	ENSGT00940000161738	ENSGT00740000117161	ENSGT00940000160211 #9	ENSGT00940000162331 #10	ENSGT00940000157672 #11	ENSGT00940000160052 #12	ENSGT00940000161047 #13	ENSGT00940000154494.b #14	ENSGT00940000157041.a #15	ENSGT00530000063853.a.b #16	ENSGT00510000047791 #17	ENSGT00510000047030.xb.b.e.a #18	ENSGT00390000006585 #19	ENSGT00390000003044 #20	ENSGT00390000018598 #21	ENSGT00940000158257 #22	ENSGT00940000156501 #23	ENSGT00390000011138 #24	ENSGT00940000153866.B #25	ENSGT00950000183211.a.a.b #26	ENSGT00390000004877 #27	ENSGT00940000161003 #28	ENSGT00940000156672 #29	ENSGT00940000153717.b #30	ENSGT00940000154258.b #31	ENSGT00390000002200.a.a #32	ENSGT00940000159716 #33	ENSGT00940000159191 #34	ENSGT00940000153875.d.b #35	ENSGT00530000063884.b #36	ENSGT00390000007606 #37
Pig-tailed macaque	MODERN SPECIES	178	DUS2 (ENSMNEG00000032376)	DPEP2NB (ENSMNEG00000041078)	DPEP2 (ENSMNEG00000031577) #9	DPEP3 (ENSMNEG00000032464) #10	SLC12A4 (ENSMNEG00000042687) #11	LCAT (ENSMNEG00000038723) #12	PSMB10 (ENSMNEG00000028402) #13	CTRL (ENSMNEG00000042215) #14	PSKH1 (ENSMNEG00000034133) #15	NRN1L (ENSMNEG00000034705) #16	EDC4 (ENSMNEG00000042691) #17	ENSMNEG00000036679 #18	THAP11 (ENSMNEG00000027776) #19	CENPT (ENSMNEG00000037705) #20	TSNAXIP1 (ENSMNEG00000043977) #21	RANBP10 (ENSMNEG00000033620) #22	GFOD2 (ENSMNEG00000034424) #23	C16orf86 (ENSMNEG00000030744) #24	ENKD1 (ENSMNEG00000036398) #25	PARD6A (ENSMNEG00000036654) #26	ACD (ENSMNEG00000031499) #27	CARMIL2 (ENSMNEG00000041702) #28	CTCF (ENSMNEG00000036416) #29	RIPOR1 (ENSMNEG00000031800) #30	AGRP (ENSMNEG00000028917) #31	ATP6V0D1 (ENSMNEG00000030202) #32	HSD11B2 (ENSMNEG00000032697) #33	ZDHHC1 (ENSMNEG00000040984) #34	TPPP3 (ENSMNEG00000029652) #35	LRRC36 (ENSMNEG00000038276) #36	KCTD19 (ENSMNEG00000041509) #37
Macaca_a	ANCESTRAL SPECIES	14	ENSGT00940000161738	ENSGT00740000117161	ENSGT00940000160211 #9	ENSGT00940000162331 #10	ENSGT00940000157672 #11	ENSGT00940000160052 #12	ENSGT00940000161047 #13	ENSGT00940000154494.b #14	ENSGT00940000157041.a #15	ENSGT00530000063853.a.b #16	ENSGT00510000047791 #17	ENSGT00510000047030.xb.b.e.b #18	ENSGT00390000006585 #19	ENSGT00390000003044 #20	ENSGT00390000018598 #21	ENSGT00940000158257 #22	ENSGT00390000011138 #24	ENSGT00940000153866.B #25	ENSGT00950000183211.a.a.b #26	ENSGT00390000004877 #27	ENSGT00940000161003 #28	ENSGT00940000156672 #29	ENSGT00940000153717.b #30	ENSGT00940000154258.b #31	ENSGT00390000002200.a.a #32	ENSGT00940000159716 #33	ENSGT00940000159191 #34	ENSGT00940000153875.d.b #35	ENSGT00530000063884.b #36	ENSGT00390000007606 #37	ENSGT00940000158845
Crab-eating macaque	MODERN SPECIES	12	DDX28 (ENSMFAG00000032978)	DPEP2NB (ENSMFAG00000061219)	DPEP2 (ENSMFAG00000000644) #9	DPEP3 (ENSMFAG00000037108) #10	SLC12A4 (ENSMFAG00000038855) #11	LCAT (ENSMFAG00000002764) #12	PSMB10 (ENSMFAG00000036794) #13	CTRL (ENSMFAG00000041954) #14	PSKH1 (ENSMFAG00000034697) #15	NRN1L (ENSMFAG00000049916) #16	EDC4 (ENSMFAG00000030369) #17	NUTF2 (ENSMFAG00000047434) #18	THAP11 (ENSMFAG00000048024) #19	CENPT (ENSMFAG00000000806) #20	TSNAXIP1 (ENSMFAG00000035364) #21	RANBP10 (ENSMFAG00000035893) #22	C16orf86 (ENSMFAG00000044426) #24	ENKD1 (ENSMFAG00000031412) #25	PARD6A (ENSMFAG00000030985) #26	ACD (ENSMFAG00000038023) #27	ENSMFAG00000063586	CTCF (ENSMFAG00000001212) #29	RIPOR1 (ENSMFAG00000045065) #30	AGRP (ENSMFAG00000035580) #31	HSD11B2 (ENSMFAG00000041126) #33	ATP6V0D1 (ENSMFAG00000000689) #32	ZDHHC1 (ENSMFAG00000037894) #34	TPPP3 (ENSMFAG00000030980) #35	LRRC36 (ENSMFAG00000002905) #36	KCTD19 (ENSMFAG00000019930) #37	PLEKHG4 (ENSMFAG00000014752)
Rhesus	MODERN SPECIES	12	DUS2 (ENSMMUG00000021841)	DDX28 (ENSMMUG00000010836)	DPEP2NB (ENSMMUG00000057743)	DPEP2 (ENSMMUG00000016491) #9	DPEP3 (ENSMMUG00000029101) #10	SLC12A4 (ENSMMUG00000008491) #11	LCAT (ENSMMUG00000059923) #12	PSMB10 (ENSMMUG00000064535) #13	PSKH1 (ENSMMUG00000011895) #15	NRN1L (ENSMMUG00000029103) #16	EDC4 (ENSMMUG00000011888) #17	NUTF2 (ENSMMUG00000052035) #18	THAP11 (ENSMMUG00000013240) #19	CENPT (ENSMMUG00000007802) #20	TSNAXIP1 (ENSMMUG00000007803) #21	RANBP10 (ENSMMUG00000007804) #22	C20H16orf86 (ENSMMUG00000043912) #24	ENKD1 (ENSMMUG00000009808) #25	PARD6A (ENSMMUG00000062585) #26	ACD (ENSMMUG00000009805) #27	CARMIL2 (ENSMMUG00000009799) #28	CTCF (ENSMMUG00000009798) #29	RIPOR1 (ENSMMUG00000017105) #30	AGRP (ENSMMUG00000060341) #31	ATP6V0D1 (ENSMMUG00000029105) #32	HSD11B2 (ENSMMUG00000008034) #33	ZDHHC1 (ENSMMUG00000009825) #34	TPPP3 (ENSMMUG00000054637) #35	LRRC36 (ENSMMUG00000009821) #36	KCTD19 (ENSMMUG00000004971) #37	SLC9A5 (ENSMMUG00000059990)
Cercopithecinae_b	ANCESTRAL SPECIES	5	ENSGT00740000117161	ENSGT00940000160211 #9	ENSGT00940000162331 #10	ENSGT00940000157672 #11	ENSGT00940000160052 #12	ENSGT00940000161047 #13	ENSGT00940000154494.b #14	ENSGT00940000157041.a #15	ENSGT00530000063853.a.b #16	ENSGT00510000047791 #17	ENSGT00510000047030.xb.b.f #18	ENSGT00510000047030.xb.b.e.b #18	ENSGT00390000006585 #19	ENSGT00390000003044 #20	ENSGT00390000018598 #21	ENSGT00940000158257 #22	ENSGT00940000156501 #23	ENSGT00390000011138 #24	ENSGT00940000153866.B #25	ENSGT00950000183211.a.a.b #26	ENSGT00390000004877 #27	ENSGT00940000161003 #28	ENSGT00940000156672 #29	ENSGT00940000153717.b #30	ENSGT00940000154258.b #31	ENSGT00390000002200.a.a #32	ENSGT00910000147085	ENSGT00940000159716 #33	ENSGT00940000159191 #34	ENSGT00940000153875.d.b #35	ENSGT00530000063884.b #36
Olive baboon	MODERN SPECIES	9	SLC12A4 (ENSPANG00000025996) #11	LCAT (ENSPANG00000022341) #12	PSMB10 (ENSPANG00000017133) #13	CTRL (ENSPANG00000008633) #14	PSKH1 (ENSPANG00000025997) #15	ENSPANG00000043937 #16	ENSPANG00000049875 #18	ENSPANG00000040192 #16	EDC4 (ENSPANG00000015094) #17	ENSPANG00000049299 #18	ENSPANG00000039987 #16	ENSPANG00000048119 #18	THAP11 (ENSPANG00000011972) #19	CENPT (ENSPANG00000017333) #20	TSNAXIP1 (ENSPANG00000024774) #21	RANBP10 (ENSPANG00000008634) #22	ENSPANG00000018429 #23	C16orf86 (ENSPANG00000021144) #24	ENKD1 (ENSPANG00000015181) #25	PARD6A (ENSPANG00000022534) #26	ACD (ENSPANG00000017897) #27	CARMIL2 (ENSPANG00000018344) #28	CTCF (ENSPANG00000015703) #29	RIPOR1 (ENSPANG00000008637) #30	AGRP (ENSPANG00000024565) #31	ATP6V0D1 (ENSPANG00000017898) #32	HSD11B2 (ENSPANG00000047862) #33	ZDHHC1 (ENSPANG00000008638) #34	TPPP3 (ENSPANG00000018345) #35	LRRC36 (ENSPANG00000021733) #36	KCTD19 (ENSPANG00000034300) #37
Cercopithecinae_d	ANCESTRAL SPECIES	4	ENSGT00540000070023.c.b.a.b	ENSGT00550000075019	ENSGT00740000117161	ENSGT00940000160211 #9	ENSGT00940000157672 #11	ENSGT00940000160052 #12	ENSGT00940000161047 #13	ENSGT00940000154494.b #14	ENSGT00940000157041.a #15	ENSGT00530000063853.a.b #16	ENSGT00510000047791 #17	ENSGT00510000047030.xb.b.f #18	ENSGT00390000006585 #19	ENSGT00390000003044 #20	ENSGT00390000018598 #21	ENSGT00940000158257 #22	ENSGT00940000156501 #23	ENSGT00390000011138 #24	ENSGT00940000153866.B #25	ENSGT00950000183211.a.a.b #26	ENSGT00390000004877 #27	ENSGT00940000161003 #28	ENSGT00940000156672 #29	ENSGT00940000153717.b #30	ENSGT00940000154258.b #31	ENSGT00390000002200.a.a #32	ENSGT00910000147085	ENSGT00940000159716 #33	ENSGT00940000159191 #34	ENSGT00940000153875.d.b #35	ENSGT00530000063884.b #36
Drill	MODERN SPECIES	1217						SLC12A4 (ENSMLEG00000037004) #11	LCAT (ENSMLEG00000014905) #12	PSMB10 (ENSMLEG00000040076) #13	CTRL (ENSMLEG00000029847) #14	PSKH1 (ENSMLEG00000027965) #15	NRN1L (ENSMLEG00000036474) #16	EDC4 (ENSMLEG00000035003) #17	ENSMLEG00000038462 #18	CENPT (ENSMLEG00000005136) #20	TSNAXIP1 (ENSMLEG00000028502) #21	RANBP10 (ENSMLEG00000029927) #22	GFOD2 (ENSMLEG00000033144) #23	C16orf86 (ENSMLEG00000042558) #24	ENKD1 (ENSMLEG00000036449) #25	PARD6A (ENSMLEG00000032266) #26	ACD (ENSMLEG00000028577) #27	CARMIL2 (ENSMLEG00000041039) #28	CTCF (ENSMLEG00000041196) #29	RIPOR1 (ENSMLEG00000035065) #30	AGRP (ENSMLEG00000035909) #31	ATP6V0D1 (ENSMLEG00000043793) #32	ENSMLEG00000041928	HSD11B2 (ENSMLEG00000031297) #33	ZDHHC1 (ENSMLEG00000027489) #34	TPPP3 (ENSMLEG00000009666) #35	LRRC36 (ENSMLEG00000040310) #36
Sooty mangabey	MODERN SPECIES	96	ENSCATG00000030878	DUS2 (ENSCATG00000030756)	DPEP2NB (ENSCATG00000032757)	DPEP2 (ENSCATG00000042589) #9	SLC12A4 (ENSCATG00000036997) #11	LCAT (ENSCATG00000017084) #12	PSMB10 (ENSCATG00000032828) #13	CTRL (ENSCATG00000028170) #14	PSKH1 (ENSCATG00000031106) #15	NRN1L (ENSCATG00000037950) #16	EDC4 (ENSCATG00000044352) #17	ENSCATG00000027997 #18	THAP11 (ENSCATG00000005392) #19	CENPT (ENSCATG00000031326) #20	TSNAXIP1 (ENSCATG00000034746) #21	RANBP10 (ENSCATG00000035450) #22	GFOD2 (ENSCATG00000030926) #23	C16orf86 (ENSCATG00000037339) #24	ENKD1 (ENSCATG00000042822) #25	PARD6A (ENSCATG00000015748) #26	CARMIL2 (ENSCATG00000031076) #28	CTCF (ENSCATG00000042738) #29	RIPOR1 (ENSCATG00000038948) #30	AGRP (ENSCATG00000042230) #31	ATP6V0D1 (ENSCATG00000033064) #32	HSD11B2 (ENSCATG00000037152) #33	ZDHHC1 (ENSCATG00000029639) #34	TPPP3 (ENSCATG00000019059) #35	LRRC36 (ENSCATG00000035252) #36	KCTD19 (ENSCATG00000037148) #37	PLEKHG4 (ENSCATG00000044215)
Rhinopithecus	ANCESTRAL SPECIES	25	ENSGT00550000075019	ENSGT00740000117161	ENSGT00940000160211 #9	ENSGT00940000162331 #10	ENSGT00940000157672 #11	ENSGT00940000160052 #12	ENSGT00940000161047 #13	ENSGT00940000154494.b #14	ENSGT00940000157041.a #15	ENSGT00530000063853.a.b #16	ENSGT00510000047791 #17	ENSGT00510000047030.xb.b.c #18	ENSGT00390000006585 #19	ENSGT00390000003044 #20	ENSGT00390000018598 #21	ENSGT00940000158257 #22	ENSGT00940000156501 #23	ENSGT00390000011138 #24	ENSGT00940000153866.B #25	ENSGT00950000183211.a.a.b #26	ENSGT00390000004877 #27	ENSGT00940000161003 #28	ENSGT00940000156672 #29	ENSGT00940000153717.b #30	ENSGT00940000154258.b #31	ENSGT00390000002200.a.a #32	ENSGT00940000159716 #33	ENSGT00940000159191 #34	ENSGT00940000153875.d.b #35	ENSGT00530000063884.b #36	ENSGT00390000007606 #37
Golden snub-nosed monkey	MODERN SPECIES	2988	DPEP2NB (ENSRROG00000044801)	ENSRROG00000017133	DPEP2 (ENSRROG00000032245) #9	DPEP3 (ENSRROG00000029821) #10	SLC12A4 (ENSRROG00000032202) #11	LCAT (ENSRROG00000040527) #12	PSMB10 (ENSRROG00000003928) #13	CTRL (ENSRROG00000028038) #14	PSKH1 (ENSRROG00000031329) #15	NRN1L (ENSRROG00000005302) #16	EDC4 (ENSRROG00000034303) #17	NUTF2 (ENSRROG00000038445) #18	THAP11 (ENSRROG00000011304) #19	CENPT (ENSRROG00000041945) #20	TSNAXIP1 (ENSRROG00000029650) #21	RANBP10 (ENSRROG00000035185) #22	GFOD2 (ENSRROG00000042550) #23	C16orf86 (ENSRROG00000029770) #24	ENKD1 (ENSRROG00000002001) #25	PARD6A (ENSRROG00000017296) #26	ACD (ENSRROG00000006320) #27	CARMIL2 (ENSRROG00000026850) #28	CTCF (ENSRROG00000038473) #29	RIPOR1 (ENSRROG00000031142) #30	AGRP (ENSRROG00000043812) #31	ATP6V0D1 (ENSRROG00000009060) #32	HSD11B2 (ENSRROG00000028099) #33	ZDHHC1 (ENSRROG00000040272) #34	TPPP3 (ENSRROG00000036135) #35	LRRC36 (ENSRROG00000033554) #36	KCTD19 (ENSRROG00000033022) #37
Black snub-nosed monkey	MODERN SPECIES	1559	DUS2 (ENSRBIG00000028682)	DPEP2NB (ENSRBIG00000020430)	DPEP2 (ENSRBIG00000029544) #9	DPEP3 (ENSRBIG00000044138) #10	SLC12A4 (ENSRBIG00000044117) #11	LCAT (ENSRBIG00000041466) #12	PSMB10 (ENSRBIG00000040876) #13	CTRL (ENSRBIG00000039483) #14	PSKH1 (ENSRBIG00000037495) #15	NRN1L (ENSRBIG00000033580) #16	EDC4 (ENSRBIG00000035244) #17	ENSRBIG00000023161 #18	THAP11 (ENSRBIG00000020481) #19	CENPT (ENSRBIG00000041361) #20	TSNAXIP1 (ENSRBIG00000032306) #21	RANBP10 (ENSRBIG00000041954) #22	GFOD2 (ENSRBIG00000033687) #23	C16orf86 (ENSRBIG00000038642) #24	ENKD1 (ENSRBIG00000038033) #25	PARD6A (ENSRBIG00000044026) #26	ACD (ENSRBIG00000042682) #27	CARMIL2 (ENSRBIG00000029677) #28	CTCF (ENSRBIG00000034739) #29	RIPOR1 (ENSRBIG00000032040) #30	AGRP (ENSRBIG00000044991) #31	ATP6V0D1 (ENSRBIG00000034525) #32	HSD11B2 (ENSRBIG00000033356) #33	ZDHHC1 (ENSRBIG00000030016) #34	TPPP3 (ENSRBIG00000037427) #35	LRRC36 (ENSRBIG00000036501) #36	KCTD19 (ENSRBIG00000039801) #37
Hominoidea	ANCESTRAL SPECIES	9	ENSGT00940000161738	ENSGT00740000117161	ENSGT00940000160211 #9	ENSGT00940000162331 #10	ENSGT00940000157672 #11	ENSGT00940000160052 #12	ENSGT00940000161047 #13	ENSGT00940000154494.b #14	ENSGT00940000157041.a #15	ENSGT00530000063853.a.b #16	ENSGT00510000047791 #17	ENSGT00510000047030.xb.b #18	ENSGT00390000006585 #19	ENSGT00390000003044 #20	ENSGT00390000018598 #21	ENSGT00940000158257 #22	ENSGT00940000156501 #23	ENSGT00390000011138 #24	ENSGT00940000153866.B #25	ENSGT00950000183211.a.a.b #26	ENSGT00390000004877 #27	ENSGT00940000161003 #28	ENSGT00940000156672 #29	ENSGT00940000153717.b #30	ENSGT00940000154258.b #31	ENSGT00390000002200.a.a #32	ENSGT00910000147085	ENSGT00940000159716 #33	ENSGT00940000159191 #34	ENSGT00940000153875.d.b #35	ENSGT00530000063884.b #36
Gibbon	MODERN SPECIES	11	DUS2 (ENSNLEG00000005100)	DPEP2NB (ENSNLEG00000027964)	DPEP2 (ENSNLEG00000005090) #9	DPEP3 (ENSNLEG00000005069) #10	SLC12A4 (ENSNLEG00000005066) #11	LCAT (ENSNLEG00000005051) #12	PSMB10 (ENSNLEG00000005024) #13	CTRL (ENSNLEG00000005013) #14	PSKH1 (ENSNLEG00000005006) #15	NRN1L (ENSNLEG00000005002) #16	EDC4 (ENSNLEG00000004932) #17	ENSNLEG00000004889 #18	THAP11 (ENSNLEG00000032074) #19	CENPT (ENSNLEG00000004913) #20	TSNAXIP1 (ENSNLEG00000004902) #21	RANBP10 (ENSNLEG00000004851) #22	GFOD2 (ENSNLEG00000004846) #23	C16orf86 (ENSNLEG00000004840) #24	ENKD1 (ENSNLEG00000004839) #25	PARD6A (ENSNLEG00000004829) #26	ACD (ENSNLEG00000035728) #27	CARMIL2 (ENSNLEG00000004765) #28	ENSNLEG00000004747 #29	RIPOR1 (ENSNLEG00000004731) #30	AGRP (ENSNLEG00000004727) #31	ATP6V0D1 (ENSNLEG00000004667) #32	HSD11B2 (ENSNLEG00000004600) #33	ENSNLEG00000004665	ENSNLEG00000004659 #34	TPPP3 (ENSNLEG00000004642) #35	ENSNLEG00000035657 #36
Hominidae	ANCESTRAL SPECIES	9	ENSGT00940000161738	ENSGT00740000117161	ENSGT00940000160211 #9	ENSGT00940000162331 #10	ENSGT00940000157672 #11	ENSGT00940000160052 #12	ENSGT00940000161047 #13	ENSGT00940000154494.b #14	ENSGT00940000157041.a #15	ENSGT00530000063853.a.b #16	ENSGT00510000047791 #17	ENSGT00510000047030.xb.b #18	ENSGT00390000006585 #19	ENSGT00390000003044 #20	ENSGT00390000018598 #21	ENSGT00940000158257 #22	ENSGT00940000156501 #23	ENSGT00390000011138 #24	ENSGT00940000153866.B #25	ENSGT00950000183211.a.a.b #26	ENSGT00390000004877 #27	ENSGT00940000161003 #28	ENSGT00940000156672 #29	ENSGT00940000153717.b #30	ENSGT00940000154258.b #31	ENSGT00390000002200.a.a #32	ENSGT00910000147085	ENSGT00940000159716 #33	ENSGT00940000159191 #34	ENSGT00940000153875.d.b #35	ENSGT00530000063884.b #36
Orangutan	MODERN SPECIES	7	DDX28 (ENSPPYG00000007481)	DPEP2NB (ENSPPYG00000032411)	DPEP2 (ENSPPYG00000007480) #9	DPEP3 (ENSPPYG00000007479) #10	SLC12A4 (ENSPPYG00000007478) #11	LCAT (ENSPPYG00000007477) #12	PSMB10 (ENSPPYG00000007476) #13	CTRL (ENSPPYG00000007475) #14	ENSPPYG00000007474 #15	NRN1L (ENSPPYG00000030154) #16	EDC4 (ENSPPYG00000007473) #17	NUTF2 (ENSPPYG00000007472) #18	THAP11 (ENSPPYG00000007471) #19	CENPT (ENSPPYG00000007470) #20	TSNAXIP1 (ENSPPYG00000007469) #21	RANBP10 (ENSPPYG00000007468) #22	GFOD2 (ENSPPYG00000007467) #23	C16orf86 (ENSPPYG00000032624) #24	ENKD1 (ENSPPYG00000007465) #25	PARD6A (ENSPPYG00000007464) #26	ACD (ENSPPYG00000007463) #27	CARMIL2 (ENSPPYG00000007462) #28	CTCF (ENSPPYG00000007461) #29	AGRP (ENSPPYG00000007459) #31	ATP6V0D1 (ENSPPYG00000007458) #32	ENSPPYG00000040595	HSD11B2 (ENSPPYG00000034934) #33	ENSPPYG00000007456 #34	TPPP3 (ENSPPYG00000039268) #35	LRRC36 (ENSPPYG00000007454) #36	KCTD19 (ENSPPYG00000007453) #37
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	19	ENSGT00940000161738	ENSGT00740000117161	ENSGT00940000160211 #9	ENSGT00940000162331 #10	ENSGT00940000157672 #11	ENSGT00940000160052 #12	ENSGT00940000161047 #13	ENSGT00940000154494.b #14	ENSGT00940000157041.a #15	ENSGT00530000063853.a.b #16	ENSGT00510000047791 #17	ENSGT00510000047030.xb.b #18	ENSGT00390000006585 #19	ENSGT00390000003044 #20	ENSGT00390000018598 #21	ENSGT00940000158257 #22	ENSGT00940000156501 #23	ENSGT00390000011138 #24	ENSGT00940000153866.B #25	ENSGT00950000183211.a.a.b #26	ENSGT00390000004877 #27	ENSGT00940000161003 #28	ENSGT00940000156672 #29	ENSGT00940000153717.b #30	ENSGT00940000154258.b #31	ENSGT00390000002200.a.a #32	ENSGT00910000147085	ENSGT00940000159716 #33	ENSGT00940000159191 #34	ENSGT00940000153875.d.b #35	ENSGT00530000063884.b #36
Gorilla	MODERN SPECIES	7	DUS2 (ENSGGOG00000007381)	DDX28 (ENSGGOG00000001220)	DPEP2 (ENSGGOG00000012633) #9	DPEP3 (ENSGGOG00000012625) #10	SLC12A4 (ENSGGOG00000004986) #11	LCAT (ENSGGOG00000040012) #12	PSMB10 (ENSGGOG00000013901) #13	CTRL (ENSGGOG00000013893) #14	PSKH1 (ENSGGOG00000013890) #15	NRN1L (ENSGGOG00000013883) #16	EDC4 (ENSGGOG00000013857) #17	NUTF2 (ENSGGOG00000023925) #18	THAP11 (ENSGGOG00000013846) #19	CENPT (ENSGGOG00000001458) #20	TSNAXIP1 (ENSGGOG00000001452) #21	RANBP10 (ENSGGOG00000017149) #22	GFOD2 (ENSGGOG00000027976) #23	C16orf86 (ENSGGOG00000003897) #24	ENKD1 (ENSGGOG00000003893) #25	PARD6A (ENSGGOG00000003886) #26	ACD (ENSGGOG00000003881) #27	CARMIL2 (ENSGGOG00000003869) #28	CTCF (ENSGGOG00000001063) #29	RIPOR1 (ENSGGOG00000011949) #30	AGRP (ENSGGOG00000012981) #31	ATP6V0D1 (ENSGGOG00000012974) #32	ENSGGOG00000043327	HSD11B2 (ENSGGOG00000012970) #33	ENSGGOG00000008484 #34	TPPP3 (ENSGGOG00000008477) #35	LRRC36 (ENSGGOG00000008469) #36
Homo/Pan group	ANCESTRAL SPECIES	19	ENSGT00940000161738	ENSGT00740000117161	ENSGT00940000160211 #9	ENSGT00940000162331 #10	ENSGT00940000157672 #11	ENSGT00940000160052 #12	ENSGT00940000161047 #13	ENSGT00940000154494.b #14	ENSGT00940000157041.a #15	ENSGT00530000063853.a.b #16	ENSGT00510000047791 #17	ENSGT00510000047030.xb.b #18	ENSGT00390000006585 #19	ENSGT00390000003044 #20	ENSGT00390000018598 #21	ENSGT00940000158257 #22	ENSGT00940000156501 #23	ENSGT00390000011138 #24	ENSGT00940000153866.B #25	ENSGT00950000183211.a.a.b #26	ENSGT00390000004877 #27	ENSGT00940000161003 #28	ENSGT00940000156672 #29	ENSGT00940000153717.b #30	ENSGT00940000154258.b #31	ENSGT00390000002200.a.a #32	ENSGT00910000147085	ENSGT00940000159716 #33	ENSGT00940000159191 #34	ENSGT00940000153875.d.b #35	ENSGT00530000063884.b #36
Human	MODERN SPECIES	7	DPEP2NB (ENSG00000263201)	DUS2 (ENSG00000167264)	DPEP2 (ENSG00000167261) #9	DPEP3 (ENSG00000141096) #10	SLC12A4 (ENSG00000124067) #11	LCAT (ENSG00000213398) #12	PSMB10 (ENSG00000205220) #13	CTRL (ENSG00000141086) #14	PSKH1 (ENSG00000159792) #15	NRN1L (ENSG00000188038) #16	EDC4 (ENSG00000038358) #17	NUTF2 (ENSG00000102898) #18	THAP11 (ENSG00000168286) #19	CENPT (ENSG00000102901) #20	TSNAXIP1 (ENSG00000102904) #21	RANBP10 (ENSG00000141084) #22	GFOD2 (ENSG00000141098) #23	C16orf86 (ENSG00000159761) #24	ENKD1 (ENSG00000124074) #25	PARD6A (ENSG00000102981) #26	ACD (ENSG00000102977) #27	CARMIL2 (ENSG00000159753) #28	CTCF (ENSG00000102974) #29	RIPOR1 (ENSG00000039523) #30	AGRP (ENSG00000159723) #31	ATP6V0D1 (ENSG00000159720) #32	HSD11B2 (ENSG00000176387) #33	ZDHHC1 (ENSG00000159714) #34	TPPP3 (ENSG00000159713) #35	LRRC36 (ENSG00000159708) #36	KCTD19 (ENSG00000168676) #37
Pan	ANCESTRAL SPECIES	19	ENSGT00940000161738	ENSGT00740000117161	ENSGT00940000160211 #9	ENSGT00940000162331 #10	ENSGT00940000157672 #11	ENSGT00940000160052 #12	ENSGT00940000161047 #13	ENSGT00940000154494.b #14	ENSGT00940000157041.a #15	ENSGT00530000063853.a.b #16	ENSGT00510000047791 #17	ENSGT00510000047030.xb.b #18	ENSGT00390000006585 #19	ENSGT00390000003044 #20	ENSGT00390000018598 #21	ENSGT00940000158257 #22	ENSGT00940000156501 #23	ENSGT00390000011138 #24	ENSGT00940000153866.B #25	ENSGT00950000183211.a.a.b #26	ENSGT00390000004877 #27	ENSGT00940000161003 #28	ENSGT00940000156672 #29	ENSGT00940000153717.b #30	ENSGT00940000154258.b #31	ENSGT00390000002200.a.a #32	ENSGT00910000147085	ENSGT00940000159716 #33	ENSGT00940000159191 #34	ENSGT00940000153875.d.b #35	ENSGT00530000063884.b #36
Chimpanzee	MODERN SPECIES	7	DDX28 (ENSPTRG00000008258)	DPEP2NB (ENSPTRG00000052455)	DPEP2 (ENSPTRG00000008257) #9	DPEP3 (ENSPTRG00000008256) #10	SLC12A4 (ENSPTRG00000033921) #11	LCAT (ENSPTRG00000008254) #12	PSMB10 (ENSPTRG00000031165) #13	CTRL (ENSPTRG00000008253) #14	PSKH1 (ENSPTRG00000008252) #15	NRN1L (ENSPTRG00000008250) #16	EDC4 (ENSPTRG00000008249) #17	NUTF2 (ENSPTRG00000008248) #18	THAP11 (ENSPTRG00000049481) #19	CENPT (ENSPTRG00000008246) #20	TSNAXIP1 (ENSPTRG00000008245) #21	RANBP10 (ENSPTRG00000008244) #22	GFOD2 (ENSPTRG00000008242) #23	C16H16orf86 (ENSPTRG00000031170) #24	ENKD1 (ENSPTRG00000008240) #25	PARD6A (ENSPTRG00000008239) #26	ACD (ENSPTRG00000008238) #27	CARMIL2 (ENSPTRG00000008237) #28	CTCF (ENSPTRG00000008235) #29	RIPOR1 (ENSPTRG00000008233) #30	AGRP (ENSPTRG00000008232) #31	ATP6V0D1 (ENSPTRG00000008231) #32	ENSPTRG00000049931	HSD11B2 (ENSPTRG00000008230) #33	ZDHHC1 (ENSPTRG00000008229) #34	TPPP3 (ENSPTRG00000050239) #35	LRRC36 (ENSPTRG00000008227) #36
Bonobo	MODERN SPECIES	7	DUS2 (ENSPPAG00000029892)	DDX28 (ENSPPAG00000036971)	DPEP2 (ENSPPAG00000037797) #9	DPEP3 (ENSPPAG00000032158) #10	SLC12A4 (ENSPPAG00000035394) #11	LCAT (ENSPPAG00000035631) #12	PSMB10 (ENSPPAG00000033747) #13	CTRL (ENSPPAG00000036784) #14	PSKH1 (ENSPPAG00000027214) #15	NRN1L (ENSPPAG00000035087) #16	EDC4 (ENSPPAG00000032697) #17	NUTF2 (ENSPPAG00000044012) #18	THAP11 (ENSPPAG00000009407) #19	CENPT (ENSPPAG00000034857) #20	TSNAXIP1 (ENSPPAG00000041091) #21	RANBP10 (ENSPPAG00000038250) #22	GFOD2 (ENSPPAG00000031872) #23	C16orf86 (ENSPPAG00000028573) #24	ENKD1 (ENSPPAG00000035195) #25	PARD6A (ENSPPAG00000037877) #26	ACD (ENSPPAG00000023233) #27	CARMIL2 (ENSPPAG00000041272) #28	CTCF (ENSPPAG00000043493) #29	RIPOR1 (ENSPPAG00000029650) #30	AGRP (ENSPPAG00000040052) #31	ATP6V0D1 (ENSPPAG00000039877) #32	ENSPPAG00000031006	HSD11B2 (ENSPPAG00000035249) #33	ENSPPAG00000030585 #34	TPPP3 (ENSPPAG00000039712) #35	LRRC36 (ENSPPAG00000032136) #36
Tarsier	MODERN SPECIES	5820	DUS2 (ENSTSYG00000013135)	DPEP2NB (ENSTSYG00000035982)	DPEP2 (ENSTSYG00000011875) #9	DPEP3 (ENSTSYG00000037092) #10	SLC12A4 (ENSTSYG00000000046) #11	LCAT (ENSTSYG00000000045) #12	PSMB10 (ENSTSYG00000030122) #13	CTRL (ENSTSYG00000001889) #14	PSKH1 (ENSTSYG00000004453) #15	NRN1L (ENSTSYG00000027171) #16	EDC4 (ENSTSYG00000010741) #17	NUTF2 (ENSTSYG00000027970) #18	THAP11 (ENSTSYG00000004624) #19	CENPT (ENSTSYG00000005847) #20	TSNAXIP1 (ENSTSYG00000008667) #21	RANBP10 (ENSTSYG00000012594) #22	GFOD2 (ENSTSYG00000037360) #23	C16orf86 (ENSTSYG00000012342) #24	ENKD1 (ENSTSYG00000029075) #25	PARD6A (ENSTSYG00000012341) #26	ACD (ENSTSYG00000036981) #27	CARMIL2 (ENSTSYG00000028534) #28	CTCF (ENSTSYG00000007670) #29	RIPOR1 (ENSTSYG00000032031) #30
Strepsirrhini	ANCESTRAL SPECIES	17	ENSGT00940000161738	ENSGT00740000117161	ENSGT00940000160211 #9	ENSGT00940000162331 #10	ENSGT00940000157672 #11	ENSGT00940000160052 #12	ENSGT00940000161047 #13	ENSGT00940000154494.b #14	ENSGT00940000157041.a #15	ENSGT00530000063853.a.b #16	ENSGT00510000047791 #17	ENSGT00510000047030 #18	ENSGT00390000006585 #19	ENSGT00390000003044 #20	ENSGT00390000018598 #21	ENSGT00940000158257 #22	ENSGT00940000156501 #23	ENSGT00390000011138 #24	ENSGT00940000153866.B #25	ENSGT00950000183211.a.a.b #26	ENSGT00390000004877 #27	ENSGT00940000161003 #28	ENSGT00940000156672 #29	ENSGT00940000153717.b #30	ENSGT00940000154258.b #31	ENSGT00390000002200.a.a #32	ENSGT00940000159716 #33	ENSGT00940000159191 #34	ENSGT00940000153875.d.b #35	ENSGT00530000063884.b #36	ENSGT00390000007606 #37
Lemuriformes	ANCESTRAL SPECIES	31	ENSGT00940000155200	ENSGT00940000161738	ENSGT00940000160211 #9	ENSGT00940000162331 #10	ENSGT00940000157672 #11	ENSGT00940000160052 #12	ENSGT00940000161047 #13	ENSGT00940000154494.b #14	ENSGT00940000157041.a #15	ENSGT00530000063853.a.b #16	ENSGT00510000047791 #17	ENSGT00510000047030.vb #18	ENSGT00390000006585 #19	ENSGT00390000003044 #20	ENSGT00390000018598 #21	ENSGT00940000158257 #22	ENSGT00940000156501 #23	ENSGT00390000011138 #24	ENSGT00940000153866.B #25	ENSGT00950000183211.a.a.b #26	ENSGT00390000004877 #27	ENSGT00940000161003 #28	ENSGT00940000156672 #29	ENSGT00940000153717.b #30	ENSGT00940000154258.b #31	ENSGT00390000002200.a.a #32	ENSGT00940000159716 #33	ENSGT00940000159191 #34	ENSGT00940000153875.d.b #35	ENSGT00530000063884.b #36	ENSGT00390000007606 #37
Mouse lemur	MODERN SPECIES	12	CES3 (ENSMICG00000013385)	ENSMICG00000012346	DPEP2 (ENSMICG00000012337) #9	DPEP3 (ENSMICG00000046654) #10	SLC12A4 (ENSMICG00000012297) #11	LCAT (ENSMICG00000048149) #12	PSMB10 (ENSMICG00000012294) #13	CTRL (ENSMICG00000045759) #14	ENSMICG00000012283 #15	NRN1L (ENSMICG00000041986) #16	EDC4 (ENSMICG00000012262) #17	NUTF2 (ENSMICG00000028936) #18	THAP11 (ENSMICG00000012247) #19	CENPT (ENSMICG00000012233) #20	TSNAXIP1 (ENSMICG00000012225) #21	RANBP10 (ENSMICG00000012212) #22	GFOD2 (ENSMICG00000012208) #23	C16orf86 (ENSMICG00000029986) #24	ENKD1 (ENSMICG00000012189) #25	PARD6A (ENSMICG00000012185) #26	ACD (ENSMICG00000012170) #27	CARMIL2 (ENSMICG00000012140) #28	CTCF (ENSMICG00000012128) #29	RIPOR1 (ENSMICG00000012105) #30	AGRP (ENSMICG00000045134) #31	ATP6V0D1 (ENSMICG00000012079) #32	HSD11B2 (ENSMICG00000034557) #33	ZDHHC1 (ENSMICG00000012064) #34	TPPP3 (ENSMICG00000027878) #35	LRRC36 (ENSMICG00000012051) #36	KCTD19 (ENSMICG00000007810) #37
Lemuriformes_a	ANCESTRAL SPECIES	29	ENSGT00940000155200	ENSGT00740000117161	ENSGT00940000160211 #9	ENSGT00940000162331 #10	ENSGT00940000157672 #11	ENSGT00940000160052 #12	ENSGT00940000161047 #13	ENSGT00940000154494.b #14	ENSGT00940000157041.a #15	ENSGT00530000063853.a.b #16	ENSGT00510000047791 #17	ENSGT00510000047030.vb #18	ENSGT00390000006585 #19	ENSGT00390000003044 #20	ENSGT00390000018598 #21	ENSGT00940000158257 #22	ENSGT00940000156501 #23	ENSGT00390000011138 #24	ENSGT00940000153866.B #25	ENSGT00950000183211.a.a.b #26	ENSGT00390000004877 #27	ENSGT00940000161003 #28	ENSGT00940000156672 #29	ENSGT00940000153717.b #30	ENSGT00940000154258.b #31	ENSGT00390000002200.a.a #32	ENSGT00940000159716 #33	ENSGT00940000159191 #34	ENSGT00940000153875.d.b #35	ENSGT00530000063884.b #36	ENSGT00390000007606 #37
Coquerels sifaka	MODERN SPECIES	821	CES3 (ENSPCOG00000019594)	DPEP2NB (ENSPCOG00000020188)	DPEP2 (ENSPCOG00000024713) #9	DPEP3 (ENSPCOG00000024767) #10	SLC12A4 (ENSPCOG00000022292) #11	LCAT (ENSPCOG00000027983) #12	PSMB10 (ENSPCOG00000022959) #13	CTRL (ENSPCOG00000023863) #14	PSKH1 (ENSPCOG00000015348) #15	NRN1L (ENSPCOG00000028362) #16	EDC4 (ENSPCOG00000020076) #17	ENSPCOG00000013505 #18	THAP11 (ENSPCOG00000011642) #19	CENPT (ENSPCOG00000007216) #20	TSNAXIP1 (ENSPCOG00000020807) #21	RANBP10 (ENSPCOG00000028539) #22	GFOD2 (ENSPCOG00000025526) #23	C16orf86 (ENSPCOG00000016718) #24	ENKD1 (ENSPCOG00000008234) #25	PARD6A (ENSPCOG00000015189) #26	ACD (ENSPCOG00000027860) #27	CARMIL2 (ENSPCOG00000027346) #28	CTCF (ENSPCOG00000026050) #29	RIPOR1 (ENSPCOG00000023759) #30	AGRP (ENSPCOG00000020567) #31	ATP6V0D1 (ENSPCOG00000012981) #32	HSD11B2 (ENSPCOG00000025233) #33	ZDHHC1 (ENSPCOG00000024962) #34	TPPP3 (ENSPCOG00000016301) #35	ENSPCOG00000017976 #36	KCTD19 (ENSPCOG00000016170) #37
Greater bamboo lemur	MODERN SPECIES	1053			DPEP2 (ENSPSMG00000010774) #9	DPEP3 (ENSPSMG00000010759) #10	SLC12A4 (ENSPSMG00000010531) #11	LCAT (ENSPSMG00000010274) #12	PSMB10 (ENSPSMG00000010266) #13	CTRL (ENSPSMG00000010251) #14	PSKH1 (ENSPSMG00000010234) #15	NRN1L (ENSPSMG00000010228) #16	EDC4 (ENSPSMG00000010199) #17	NUTF2 (ENSPSMG00000010176) #18	THAP11 (ENSPSMG00000010169) #19	CENPT (ENSPSMG00000010158) #20	TSNAXIP1 (ENSPSMG00000010138) #21	RANBP10 (ENSPSMG00000010104) #22	GFOD2 (ENSPSMG00000010085) #23	C16orf86 (ENSPSMG00000010079) #24	ENKD1 (ENSPSMG00000010074) #25	PARD6A (ENSPSMG00000010062) #26	ACD (ENSPSMG00000010058) #27	CARMIL2 (ENSPSMG00000010032) #28	CTCF (ENSPSMG00000009937) #29	AGRP (ENSPSMG00000009841) #31	ATP6V0D1 (ENSPSMG00000009814) #32	HSD11B2 (ENSPSMG00000009769) #33	ZDHHC1 (ENSPSMG00000009762) #34	TPPP3 (ENSPSMG00000009738) #35	LRRC36 (ENSPSMG00000009720) #36	KCTD19 (ENSPSMG00000009687) #37	PLEKHG4 (ENSPSMG00000009668)
Bushbaby	MODERN SPECIES	266	NFATC3 (ENSOGAG00000032524)	DUS2 (ENSOGAG00000016897)	DDX28 (ENSOGAG00000016895)	DPEP3 (ENSOGAG00000012978) #10	SLC12A4 (ENSOGAG00000015587) #11	LCAT (ENSOGAG00000031091) #12	PSMB10 (ENSOGAG00000015584) #13	CTRL (ENSOGAG00000033388) #14	PSKH1 (ENSOGAG00000028446) #15	NRN1L (ENSOGAG00000034854) #16	EDC4 (ENSOGAG00000015571) #17	NUTF2 (ENSOGAG00000015568) #18	THAP11 (ENSOGAG00000034339) #19	CENPT (ENSOGAG00000015562) #20	TSNAXIP1 (ENSOGAG00000015558) #21	RANBP10 (ENSOGAG00000015555) #22	ENSOGAG00000015553	GFOD2 (ENSOGAG00000024864) #23	C16orf86 (ENSOGAG00000032116) #24	ENKD1 (ENSOGAG00000004579) #25	PARD6A (ENSOGAG00000027845) #26	ACD (ENSOGAG00000033562) #27	CARMIL2 (ENSOGAG00000011908) #28	CTCF (ENSOGAG00000011901) #29	RIPOR1 (ENSOGAG00000011861) #30	AGRP (ENSOGAG00000034563) #31	ATP6V0D1 (ENSOGAG00000000021) #32	HSD11B2 (ENSOGAG00000028718) #33	ZDHHC1 (ENSOGAG00000000020) #34	TPPP3 (ENSOGAG00000000019) #35	LRRC36 (ENSOGAG00000000018) #36
Euarchontoglires_A	ANCESTRAL SPECIES	7	ENSGT00940000161738	ENSGT00740000117161	ENSGT00940000160211 #9	ENSGT00940000162331 #10	ENSGT00940000157672 #11	ENSGT00940000160052 #12	ENSGT00940000161047 #13	ENSGT00940000154494.b #14	ENSGT00940000157041.a #15	ENSGT00530000063853.a.b #16	ENSGT00510000047791 #17	ENSGT00510000047030 #18	ENSGT00390000006585 #19	ENSGT00390000003044 #20	ENSGT00390000018598 #21	ENSGT00940000158257 #22	ENSGT00940000156501 #23	ENSGT00390000011138 #24	ENSGT00940000153866.B #25	ENSGT00950000183211.a.a.b #26	ENSGT00390000004877 #27	ENSGT00940000161003 #28	ENSGT00940000156672 #29	ENSGT00940000153717.b #30	ENSGT00940000154258.b #31	ENSGT00390000002200.a.a #32	ENSGT00940000159716 #33	ENSGT00940000159191 #34	ENSGT00940000153875.d.b #35	ENSGT00530000063884.b #36	ENSGT00390000007606 #37
Tree shrew	MODERN SPECIES	6108													NUTF2 (ENSTBEG00000011016) #18	CENPT (ENSTBEG00000010759) #20	TSNAXIP1 (ENSTBEG00000010615) #21	RANBP10 (ENSTBEG00000010412) #22
Glires	ANCESTRAL SPECIES	6	ENSGT00940000161738	ENSGT00740000117161	ENSGT00940000160211 #9	ENSGT00940000162331 #10	ENSGT00940000157672 #11	ENSGT00940000160052 #12	ENSGT00940000161047 #13	ENSGT00940000154494.b #14	ENSGT00940000157041.a #15	ENSGT00530000063853.a.b #16	ENSGT00510000047791 #17	ENSGT00510000047030 #18	ENSGT00390000006585 #19	ENSGT00390000003044 #20	ENSGT00390000018598 #21	ENSGT00940000158257 #22	ENSGT00940000156501 #23	ENSGT00390000011138 #24	ENSGT00940000153866.B #25	ENSGT00950000183211.a.a.b #26	ENSGT00390000004877 #27	ENSGT00940000161003 #28	ENSGT00940000156672 #29	ENSGT00940000153717.b #30	ENSGT00940000154258.b #31	ENSGT00390000002200.a.a #32	ENSGT00940000159716 #33	ENSGT00940000159191 #34	ENSGT00940000153875.d.b #35	ENSGT00530000063884.b #36	ENSGT00390000007606 #37
Lagomorpha	ANCESTRAL SPECIES	19	ENSGT00740000117161	ENSGT00940000160211 #9	ENSGT00940000162331 #10	ENSGT00940000157672 #11	ENSGT00940000160052 #12	ENSGT00940000161047 #13	ENSGT00940000154494.b #14	ENSGT00940000157041.a #15	ENSGT00530000063853.a.b #16	ENSGT00510000047791 #17	ENSGT00510000047030 #18	ENSGT00390000006585 #19	ENSGT00960000192590	ENSGT00390000003044 #20	ENSGT00390000018598 #21	ENSGT00940000158257 #22	ENSGT00940000156501 #23	ENSGT00390000011138 #24	ENSGT00940000153866.B #25	ENSGT00950000183211.a.a.b #26	ENSGT00390000004877 #27	ENSGT00940000161003 #28	ENSGT00940000156672 #29	ENSGT00940000153717.b #30	ENSGT00940000154258.b #31	ENSGT00390000002200.a.a #32	ENSGT00940000159716 #33	ENSGT00940000159191 #34	ENSGT00940000153875.d.b #35	ENSGT00530000063884.b #36	ENSGT00390000007606 #37
Rabbit	MODERN SPECIES	16	DUS2 (ENSOCUG00000010043)	DDX28 (ENSOCUG00000023074)	DPEP2NB (ENSOCUG00000033374)	DPEP2 (ENSOCUG00000013427) #9	SLC12A4 (ENSOCUG00000006350) #11	LCAT (ENSOCUG00000023727) #12	PSMB10 (ENSOCUG00000006348) #13	CTRL (ENSOCUG00000032326) #14	PSKH1 (ENSOCUG00000006346) #15	NRN1L (ENSOCUG00000006342) #16	EDC4 (ENSOCUG00000006327) #17	ENSOCUG00000006322 #18	THAP11 (ENSOCUG00000009342) #19	ENSOCUG00000029764	TSNAXIP1 (ENSOCUG00000006307) #21	RANBP10 (ENSOCUG00000006301) #22	ENSOCUG00000035352	GFOD2 (ENSOCUG00000009046) #23	C16orf86 (ENSOCUG00000009036) #24	ENKD1 (ENSOCUG00000009029) #25	PARD6A (ENSOCUG00000009025) #26	ENSOCUG00000009011 #27	CARMIL2 (ENSOCUG00000008990) #28	CTCF (ENSOCUG00000008983) #29	RIPOR1 (ENSOCUG00000008968) #30	AGRP (ENSOCUG00000011856) #31	ATP6V0D1 (ENSOCUG00000011850) #32	HSD11B2 (ENSOCUG00000011843) #33	ZDHHC1 (ENSOCUG00000011825) #34	ENSOCUG00000038328 #35	LRRC36 (ENSOCUG00000010080) #36
Pika	MODERN SPECIES	1345				DUS2 (ENSOPRG00000013920)	DPEP2 (ENSOPRG00000013896) #9	ENSOPRG00000013886 #10	SLC12A4 (ENSOPRG00000013836) #11	LCAT (ENSOPRG00000019138) #12	PSMB10 (ENSOPRG00000013823) #13	ENSOPRG00000013783 #14	PSKH1 (ENSOPRG00000013779) #15	EDC4 (ENSOPRG00000013735) #17	NUTF2 (ENSOPRG00000013727) #18	CENPT (ENSOPRG00000013710) #20	TSNAXIP1 (ENSOPRG00000013681) #21	RANBP10 (ENSOPRG00000013658) #22	ENKD1 (ENSOPRG00000013621) #25	PARD6A (ENSOPRG00000013596) #26	ACD (ENSOPRG00000013551) #27	CARMIL2 (ENSOPRG00000013488) #28	CTCF (ENSOPRG00000013470) #29	ENSOPRG00000013431 #30	AGRP (ENSOPRG00000013422) #31	ATP6V0D1 (ENSOPRG00000013411) #32	HSD11B2 (ENSOPRG00000013402) #33	ZDHHC1 (ENSOPRG00000013373) #34	LRRC36 (ENSOPRG00000013330) #36	KCTD19 (ENSOPRG00000013293) #37	PLEKHG4 (ENSOPRG00000013267)	SLC9A5 (ENSOPRG00000013233)
Rodentia	ANCESTRAL SPECIES	8	ENSGT00940000161738	ENSGT00740000117161	ENSGT00940000160211 #9	ENSGT00940000162331 #10	ENSGT00940000157672 #11	ENSGT00940000160052 #12	ENSGT00940000161047 #13	ENSGT00940000154494.b #14	ENSGT00940000157041.a #15	ENSGT00530000063853.a.b #16	ENSGT00510000047791 #17	ENSGT00510000047030 #18	ENSGT00390000006585 #19	ENSGT00390000003044 #20	ENSGT00390000018598 #21	ENSGT00940000158257 #22	ENSGT00940000156501 #23	ENSGT00390000011138 #24	ENSGT00940000153866.B #25	ENSGT00950000183211.a.a.b #26	ENSGT00390000004877 #27	ENSGT00940000161003 #28	ENSGT00940000156672 #29	ENSGT00940000153717.b #30	ENSGT00940000154258.b #31	ENSGT00390000002200.a.a #32	ENSGT00940000159716 #33	ENSGT00940000159191 #34	ENSGT00940000153875.d.b #35	ENSGT00530000063884.b #36	ENSGT00390000007606 #37
Rodentia_B	ANCESTRAL SPECIES	21	ENSGT00940000161738	ENSGT00740000117161	ENSGT00940000160211 #9	ENSGT00940000162331 #10	ENSGT00940000157672 #11	ENSGT00940000160052 #12	ENSGT00940000161047 #13	ENSGT00940000154494.b #14	ENSGT00940000157041.a #15	ENSGT00530000063853.a.b #16	ENSGT00510000047791 #17	ENSGT00510000047030 #18	ENSGT00390000006585 #19	ENSGT00390000003044 #20	ENSGT00390000018598 #21	ENSGT00940000158257 #22	ENSGT00940000156501 #23	ENSGT00390000011138 #24	ENSGT00940000153866.B #25	ENSGT00950000183211.a.a.b #26	ENSGT00390000004877 #27	ENSGT00940000161003 #28	ENSGT00940000156672 #29	ENSGT00940000153717.b #30	ENSGT00940000154258.b #31	ENSGT00390000002200.a.a #32	ENSGT00940000159716 #33	ENSGT00940000159191 #34	ENSGT00940000153875.d.b #35	ENSGT00530000063884.b #36	ENSGT00390000007606 #37
Kangaroo rat	MODERN SPECIES	337	Slc7a6 (ENSDORG00000011819)	Pla2g15 (ENSDORG00000010904)	Esrp2 (ENSDORG00000000665)	Nfatc3 (ENSDORG00000029167)	Dus2 (ENSDORG00000001654)	Ddx28 (ENSDORG00000028868)	Slc12a4 (ENSDORG00000002837) #11	Lcat (ENSDORG00000002836) #12	Psmb10 (ENSDORG00000002832) #13	Ctrl (ENSDORG00000025188) #14	Pskh1 (ENSDORG00000010706) #15	Nrn1l (ENSDORG00000010704) #16	Edc4 (ENSDORG00000010702) #17	ENSDORG00000027828 #18	Thap11 (ENSDORG00000010701) #19	Ranbp10 (ENSDORG00000010698) #22	ENSDORG00000026702	Gfod2 (ENSDORG00000000117) #23	Enkd1 (ENSDORG00000000115) #25	Pard6a (ENSDORG00000000114) #26	Carmil2 (ENSDORG00000000112) #28	Ctcf (ENSDORG00000000111) #29	Ripor1 (ENSDORG00000014643) #30	Agrp (ENSDORG00000013972) #31	Atp6v0d1 (ENSDORG00000013966) #32	Hsd11b2 (ENSDORG00000013965) #33	Zdhhc1 (ENSDORG00000003276) #34	Tppp3 (ENSDORG00000005871) #35	Lrrc36 (ENSDORG00000005869) #36	Kctd19 (ENSDORG00000005868) #37	ENSDORG00000005865
Myomorpha	ANCESTRAL SPECIES	22	ENSGT00940000161738	ENSGT00740000117161	ENSGT00940000160211 #9	ENSGT00940000162331 #10	ENSGT00940000157672 #11	ENSGT00940000160052 #12	ENSGT00940000161047 #13	ENSGT00940000154494.b #14	ENSGT00940000157041.a #15	ENSGT00530000063853.a.b #16	ENSGT00510000047791 #17	ENSGT00510000047030 #18	ENSGT00390000006585 #19	ENSGT00390000003044 #20	ENSGT00390000018598 #21	ENSGT00940000158257 #22	ENSGT00940000156501 #23	ENSGT00390000011138 #24	ENSGT00940000153866.B #25	ENSGT00950000183211.a.a.b #26	ENSGT00390000004877 #27	ENSGT00940000161003 #28	ENSGT00940000156672 #29	ENSGT00940000153717.b #30	ENSGT00940000154258.b #31	ENSGT00390000002200.a.a #32	ENSGT00940000159716 #33	ENSGT00940000159191 #34	ENSGT00940000153875.d.b #35	ENSGT00530000063884.b #36	ENSGT00390000007606 #37
Lesser Egyptian jerboa	MODERN SPECIES	85	Dus2 (ENSJJAG00000000630)	ENSJJAG00000019405	Dpep2 (ENSJJAG00000015301) #9	Dpep3 (ENSJJAG00000011227) #10	Slc12a4 (ENSJJAG00000013801) #11	Lcat (ENSJJAG00000003215) #12	Psmb10 (ENSJJAG00000022755) #13	Ctrl (ENSJJAG00000017010) #14	Pskh1 (ENSJJAG00000018174) #15	Nrn1l (ENSJJAG00000020298) #16	Edc4 (ENSJJAG00000009673) #17	ENSJJAG00000021665 #18	Thap11 (ENSJJAG00000011291) #19	Cenpt (ENSJJAG00000023604) #20	Tsnaxip1 (ENSJJAG00000023799) #21	Ranbp10 (ENSJJAG00000009861) #22	Gfod2 (ENSJJAG00000021627) #23	4933405L10Rik (ENSJJAG00000016092) #24	Enkd1 (ENSJJAG00000020112) #25	Pard6a (ENSJJAG00000020072) #26	Acd (ENSJJAG00000010311) #27	Carmil2 (ENSJJAG00000021971) #28	Ctcf (ENSJJAG00000021190) #29	Ripor1 (ENSJJAG00000011652) #30	Agrp (ENSJJAG00000020825) #31	Atp6v0d1 (ENSJJAG00000019377) #32	ENSJJAG00000013926	Hsd11b2 (ENSJJAG00000019696) #33	ENSJJAG00000023733	Zdhhc1 (ENSJJAG00000000584) #34	Tppp3 (ENSJJAG00000013386) #35
Muroidea	ANCESTRAL SPECIES	19	ENSGT00940000161738	ENSGT00740000117161	ENSGT00940000160211 #9	ENSGT00940000162331 #10	ENSGT00940000157672 #11	ENSGT00940000160052 #12	ENSGT00940000161047 #13	ENSGT00940000154494.b #14	ENSGT00940000157041.a #15	ENSGT00530000063853.a.b #16	ENSGT00510000047791 #17	ENSGT00510000047030 #18	ENSGT00390000006585 #19	ENSGT00390000003044 #20	ENSGT00390000018598 #21	ENSGT00940000158257 #22	ENSGT00940000156501 #23	ENSGT00390000011138 #24	ENSGT00940000153866.B #25	ENSGT00950000183211.a.a.b #26	ENSGT00390000004877 #27	ENSGT00940000161003 #28	ENSGT00940000156672 #29	ENSGT00940000153717.b #30	ENSGT00940000154258.b #31	ENSGT00390000002200.a.a #32	ENSGT00940000159716 #33	ENSGT00940000159191 #34	ENSGT00940000153875.d.b #35	ENSGT00530000063884.b #36	ENSGT00390000007606 #37
Upper Galilee mountains blind mole rat	MODERN SPECIES	1060	ENSNGAG00000015342	Ddx28 (ENSNGAG00000015762)	Dpep2 (ENSNGAG00000002779) #9	Dpep3 (ENSNGAG00000012609) #10	Slc12a4 (ENSNGAG00000015458) #11	Lcat (ENSNGAG00000018541) #12	Psmb10 (ENSNGAG00000018966) #13	Ctrl (ENSNGAG00000019996) #14	Pskh1 (ENSNGAG00000020265) #15	ENSNGAG00000020644 #16	Edc4 (ENSNGAG00000009549) #17	ENSNGAG00000014712 #18	Thap11 (ENSNGAG00000014563) #19	Cenpt (ENSNGAG00000016593) #20	Tsnaxip1 (ENSNGAG00000019678) #21	Ranbp10 (ENSNGAG00000010784) #22	Gfod2 (ENSNGAG00000013521) #23	4933405L10Rik (ENSNGAG00000015590) #24	Enkd1 (ENSNGAG00000020155) #25	Pard6a (ENSNGAG00000020891) #26	Acd (ENSNGAG00000000950) #27	Carmil2 (ENSNGAG00000012416) #28	Ctcf (ENSNGAG00000006559) #29	Ripor1 (ENSNGAG00000012186) #30	Agrp (ENSNGAG00000011732) #31	Atp6v0d1 (ENSNGAG00000013880) #32	Hsd11b2 (ENSNGAG00000013345) #33	Zdhhc1 (ENSNGAG00000017132) #34	Tppp3 (ENSNGAG00000019748) #35	Lrrc36 (ENSNGAG00000020479) #36	Kctd19 (ENSNGAG00000017054) #37
Muroidea_A	ANCESTRAL SPECIES	16	ENSGT00940000161738	ENSGT00740000117161.g	ENSGT00940000160211 #9	ENSGT00940000162331 #10	ENSGT00940000157672 #11	ENSGT00940000160052 #12	ENSGT00940000161047 #13	ENSGT00940000154494.b #14	ENSGT00940000157041.a #15	ENSGT00530000063853.a.b #16	ENSGT00510000047791 #17	ENSGT00510000047030 #18	ENSGT00390000006585 #19	ENSGT00390000003044 #20	ENSGT00390000018598 #21	ENSGT00940000158257 #22	ENSGT00940000156501 #23	ENSGT00390000011138 #24	ENSGT00940000153866.B #25	ENSGT00950000183211.a.a.b #26	ENSGT00390000004877 #27	ENSGT00940000161003 #28	ENSGT00940000156672 #29	ENSGT00940000153717.b #30	ENSGT00940000154258.b #31	ENSGT00390000002200.a.a #32	ENSGT00940000159716 #33	ENSGT00940000159191 #34	ENSGT00940000153875.d.b #35	ENSGT00530000063884.b #36	ENSGT00390000007606 #37
Murinae	ANCESTRAL SPECIES	15	ENSGT00940000161738	ENSGT00740000117161.g	ENSGT00940000160211 #9	ENSGT00940000162331 #10	ENSGT00940000157672 #11	ENSGT00940000160052 #12	ENSGT00940000161047 #13	ENSGT00940000154494.b #14	ENSGT00940000157041.a #15	ENSGT00530000063853.a.b #16	ENSGT00510000047791 #17	ENSGT00510000047030 #18	ENSGT00390000006585 #19	ENSGT00390000003044 #20	ENSGT00390000018598 #21	ENSGT00940000158257 #22	ENSGT00940000156501 #23	ENSGT00390000011138 #24	ENSGT00940000153866.B #25	ENSGT00950000183211.a.a.b #26	ENSGT00390000004877 #27	ENSGT00940000161003 #28	ENSGT00940000156672 #29	ENSGT00940000153717.b #30	ENSGT00940000154258.b #31	ENSGT00390000002200.a.a #32	ENSGT00940000159716 #33	ENSGT00940000159191 #34	ENSGT00940000153875.d.b #35	ENSGT00530000063884.b #36	ENSGT00390000007606 #37
Mus	ANCESTRAL SPECIES	6	ENSGT00740000117161.g	ENSGT00550000075019	ENSGT00940000160211 #9	ENSGT00940000162331 #10	ENSGT00940000157672 #11	ENSGT00940000160052 #12	ENSGT00940000161047 #13	ENSGT00940000154494.b #14	ENSGT00940000157041.a #15	ENSGT00530000063853.a.b #16	ENSGT00510000047791 #17	ENSGT00510000047030 #18	ENSGT00390000006585 #19	ENSGT00390000003044 #20	ENSGT00390000018598 #21	ENSGT00940000158257 #22	ENSGT00940000156501 #23	ENSGT00390000011138 #24	ENSGT00940000153866.B #25	ENSGT00950000183211.a.a.b #26	ENSGT00390000004877 #27	ENSGT00940000161003 #28	ENSGT00940000156672 #29	ENSGT00940000153717.b #30	ENSGT00940000154258.b #31	ENSGT00390000002200.a.a #32	ENSGT00940000159716 #33	ENSGT00940000159191 #34	ENSGT00940000153875.d.b #35	ENSGT00530000063884.b #36	ENSGT00390000007606 #37
Mus_A	ANCESTRAL SPECIES	8	ENSGT00740000117161.g	ENSGT00550000075019	ENSGT00940000160211 #9	ENSGT00940000162331 #10	ENSGT00940000157672 #11	ENSGT00940000160052 #12	ENSGT00940000161047 #13	ENSGT00940000154494.b #14	ENSGT00940000157041.a #15	ENSGT00530000063853.a.b #16	ENSGT00510000047791 #17	ENSGT00510000047030 #18	ENSGT00390000006585 #19	ENSGT00390000003044 #20	ENSGT00390000018598 #21	ENSGT00940000158257 #22	ENSGT00940000156501 #23	ENSGT00390000011138 #24	ENSGT00940000153866.B #25	ENSGT00950000183211.a.a.b #26	ENSGT00390000004877 #27	ENSGT00940000161003 #28	ENSGT00940000156672 #29	ENSGT00940000153717.b #30	ENSGT00940000154258.b #31	ENSGT00390000002200.a.a #32	ENSGT00940000159716 #33	ENSGT00940000159191 #34	ENSGT00940000153875.d.b #35	ENSGT00530000063884.b #36	ENSGT00390000007606 #37
Mus_B	ANCESTRAL SPECIES	6	ENSGT00740000117161.g	ENSGT00550000075019	ENSGT00940000160211 #9	ENSGT00940000162331 #10	ENSGT00940000157672 #11	ENSGT00940000160052 #12	ENSGT00940000161047 #13	ENSGT00940000154494.b #14	ENSGT00940000157041.a #15	ENSGT00530000063853.a.b #16	ENSGT00510000047791 #17	ENSGT00510000047030 #18	ENSGT00390000006585 #19	ENSGT00390000003044 #20	ENSGT00390000018598 #21	ENSGT00940000158257 #22	ENSGT00940000156501 #23	ENSGT00390000011138 #24	ENSGT00940000153866.B #25	ENSGT00950000183211.a.a.b #26	ENSGT00390000004877 #27	ENSGT00940000161003 #28	ENSGT00940000156672 #29	ENSGT00940000153717.b #30	ENSGT00940000154258.b #31	ENSGT00390000002200.a.a #32	ENSGT00940000159716 #33	ENSGT00940000159191 #34	ENSGT00940000153875.d.b #35	ENSGT00530000063884.b #36	ENSGT00390000007606 #37
Mouse	MODERN SPECIES	17	Dus2 (ENSMUSG00000031901)	Dpep2 (ENSMUSG00000115067)	Dpep2 (ENSMUSG00000053687) #9	Dpep3 (ENSMUSG00000031898) #10	Slc12a4 (ENSMUSG00000017765) #11	Lcat (ENSMUSG00000035237) #12	Psmb10 (ENSMUSG00000031897) #13	Ctrl (ENSMUSG00000031896) #14	Pskh1 (ENSMUSG00000048310) #15	Nrn1l (ENSMUSG00000044287) #16	Edc4 (ENSMUSG00000036270) #17	Nutf2 (ENSMUSG00000008450) #18	Thap11 (ENSMUSG00000036442) #19	Cenpt (ENSMUSG00000036672) #20	Tsnaxip1 (ENSMUSG00000031893) #21	Ranbp10 (ENSMUSG00000037415) #22	Gfod2 (ENSMUSG00000013150) #23	4933405L10Rik (ENSMUSG00000013158) #24	Enkd1 (ENSMUSG00000013155) #25	Pard6a (ENSMUSG00000005699) #26	Acd (ENSMUSG00000038000) #27	Carmil2 (ENSMUSG00000050357) #28	Ctcf (ENSMUSG00000005698) #29	Ripor1 (ENSMUSG00000038604) #30	Agrp (ENSMUSG00000005705) #31	Atp6v0d1 (ENSMUSG00000013160) #32	Hsd11b2 (ENSMUSG00000031891) #33	Zdhhc1 (ENSMUSG00000039199) #34	Tppp3 (ENSMUSG00000014846) #35	Lrrc36 (ENSMUSG00000054320) #36	Kctd19 (ENSMUSG00000051648) #37
Mus_C	ANCESTRAL SPECIES	5	ENSGT00550000075019	ENSGT00940000161738	ENSGT00940000160211 #9	ENSGT00940000162331 #10	ENSGT00940000157672 #11	ENSGT00940000160052 #12	ENSGT00940000161047 #13	ENSGT00940000154494.b #14	ENSGT00940000157041.a #15	ENSGT00530000063853.a.b #16	ENSGT00510000047791 #17	ENSGT00510000047030 #18	ENSGT00390000006585 #19	ENSGT00390000003044 #20	ENSGT00390000018598 #21	ENSGT00940000158257 #22	ENSGT00940000156501 #23	ENSGT00390000011138 #24	ENSGT00940000153866.B #25	ENSGT00950000183211.a.a.b #26	ENSGT00390000004877 #27	ENSGT00940000161003 #28	ENSGT00940000156672 #29	ENSGT00940000153717.b #30	ENSGT00940000154258.b #31	ENSGT00390000002200.a.a #32	ENSGT00940000159716 #33	ENSGT00940000159191 #34	ENSGT00940000153875.d.b #35	ENSGT00530000063884.b #36	ENSGT00390000007606 #37
Steppe mouse	MODERN SPECIES	2682															Tsnaxip1 (ENSMSIG00000016772) #21	Ranbp10 (ENSMSIG00000016733) #22	ENSMSIG00000016724	Gfod2 (ENSMSIG00000016708) #23	4933405L10Rik (ENSMSIG00000016691) #24	Enkd1 (ENSMSIG00000016679) #25	Pard6a (ENSMSIG00000016650) #26	Acd (ENSMSIG00000016623) #27	Carmil2 (ENSMSIG00000016528) #28	ENSMSIG00000016511	Ctcf (ENSMSIG00000016451) #29	Agrp (ENSMSIG00000016436) #31	Ripor1 (ENSMSIG00000016315) #30	Atp6v0d1 (ENSMSIG00000016254) #32	Hsd11b2 (ENSMSIG00000016242) #33	Zdhhc1 (ENSMSIG00000016223) #34	Tppp3 (ENSMSIG00000016207) #35
spretus	MODERN SPECIES	17	Ddx28 (MGP_SPRETEiJ_G0032628)	Dus2 (MGP_SPRETEiJ_G0032627)	MGP_SPRETEiJ_G0032626 #9	Dpep3 (MGP_SPRETEiJ_G0032625) #10	Slc12a4 (MGP_SPRETEiJ_G0032624) #11	Lcat (MGP_SPRETEiJ_G0032623) #12	Psmb10 (MGP_SPRETEiJ_G0032622) #13	Ctrl (MGP_SPRETEiJ_G0032621) #14	Pskh1 (MGP_SPRETEiJ_G0032620) #15	Nrn1l (MGP_SPRETEiJ_G0032619) #16	Edc4 (MGP_SPRETEiJ_G0032618) #17	MGP_SPRETEiJ_G0032617 #18	Thap11 (MGP_SPRETEiJ_G0032616) #19	Cenpt (MGP_SPRETEiJ_G0032615) #20	Tsnaxip1 (MGP_SPRETEiJ_G0032614) #21	Ranbp10 (MGP_SPRETEiJ_G0032613) #22	Gfod2 (MGP_SPRETEiJ_G0032612) #23	4933405L10Rik (MGP_SPRETEiJ_G0032611) #24	Enkd1 (MGP_SPRETEiJ_G0032610) #25	Pard6a (MGP_SPRETEiJ_G0032609) #26	Acd (MGP_SPRETEiJ_G0032608) #27	MGP_SPRETEiJ_G0032607 #28	Ctcf (MGP_SPRETEiJ_G0032606) #29	Ripor1 (MGP_SPRETEiJ_G0032605) #30	Agrp (MGP_SPRETEiJ_G0032604) #31	Atp6v0d1 (MGP_SPRETEiJ_G0032603) #32	Hsd11b2 (MGP_SPRETEiJ_G0032602) #33	Zdhhc1 (MGP_SPRETEiJ_G0032601) #34	Tppp3 (MGP_SPRETEiJ_G0032600) #35	Lrrc36 (MGP_SPRETEiJ_G0032599) #36	Kctd19 (MGP_SPRETEiJ_G0032598) #37
Ryukyu mouse	MODERN SPECIES	17	Ddx28 (MGP_CAROLIEiJ_G0031510)	MGP_CAROLIEiJ_G0031509	MGP_CAROLIEiJ_G0031508 #9	Dpep3 (MGP_CAROLIEiJ_G0031507) #10	Slc12a4 (MGP_CAROLIEiJ_G0031506) #11	Lcat (MGP_CAROLIEiJ_G0031505) #12	Psmb10 (MGP_CAROLIEiJ_G0031504) #13	Ctrl (MGP_CAROLIEiJ_G0031503) #14	Pskh1 (MGP_CAROLIEiJ_G0031502) #15	Nrn1l (MGP_CAROLIEiJ_G0031501) #16	Edc4 (MGP_CAROLIEiJ_G0031500) #17	MGP_CAROLIEiJ_G0031499 #18	Thap11 (MGP_CAROLIEiJ_G0031498) #19	Cenpt (MGP_CAROLIEiJ_G0031497) #20	Tsnaxip1 (MGP_CAROLIEiJ_G0031496) #21	Ranbp10 (MGP_CAROLIEiJ_G0031495) #22	Gfod2 (MGP_CAROLIEiJ_G0031494) #23	4933405L10Rik (MGP_CAROLIEiJ_G0031493) #24	Enkd1 (MGP_CAROLIEiJ_G0031492) #25	Pard6a (MGP_CAROLIEiJ_G0031491) #26	Acd (MGP_CAROLIEiJ_G0031490) #27	MGP_CAROLIEiJ_G0031489 #28	Ctcf (MGP_CAROLIEiJ_G0031488) #29	Ripor1 (MGP_CAROLIEiJ_G0031487) #30	Agrp (MGP_CAROLIEiJ_G0031486) #31	Atp6v0d1 (MGP_CAROLIEiJ_G0031485) #32	Hsd11b2 (MGP_CAROLIEiJ_G0031484) #33	Zdhhc1 (MGP_CAROLIEiJ_G0031483) #34	Tppp3 (MGP_CAROLIEiJ_G0031482) #35	Lrrc36 (MGP_CAROLIEiJ_G0031481) #36	Kctd19 (MGP_CAROLIEiJ_G0031480) #37
Shrew mouse	MODERN SPECIES	12	Ddx28 (MGP_PahariEiJ_G0023110)	Dus2 (MGP_PahariEiJ_G0023109)	MGP_PahariEiJ_G0023108 #9	Dpep3 (MGP_PahariEiJ_G0023107) #10	Slc12a4 (MGP_PahariEiJ_G0023106) #11	Lcat (MGP_PahariEiJ_G0023105) #12	Psmb10 (MGP_PahariEiJ_G0023104) #13	Ctrl (MGP_PahariEiJ_G0023103) #14	Pskh1 (MGP_PahariEiJ_G0023102) #15	Nrn1l (MGP_PahariEiJ_G0023101) #16	Edc4 (MGP_PahariEiJ_G0023100) #17	MGP_PahariEiJ_G0023099 #18	Thap11 (MGP_PahariEiJ_G0023098) #19	Cenpt (MGP_PahariEiJ_G0023097) #20	Tsnaxip1 (MGP_PahariEiJ_G0023096) #21	Ranbp10 (MGP_PahariEiJ_G0023095) #22	Gfod2 (MGP_PahariEiJ_G0023094) #23	4933405L10Rik (MGP_PahariEiJ_G0023093) #24	Enkd1 (MGP_PahariEiJ_G0023092) #25	Pard6a (MGP_PahariEiJ_G0023091) #26	Acd (MGP_PahariEiJ_G0023090) #27	MGP_PahariEiJ_G0023089 #28	Ctcf (MGP_PahariEiJ_G0023088) #29	Ripor1 (MGP_PahariEiJ_G0023087) #30	Agrp (MGP_PahariEiJ_G0023086) #31	Atp6v0d1 (MGP_PahariEiJ_G0023085) #32	Hsd11b2 (MGP_PahariEiJ_G0023084) #33	Zdhhc1 (MGP_PahariEiJ_G0023083) #34	Tppp3 (MGP_PahariEiJ_G0023082) #35	MGP_PahariEiJ_G0023081 #36	Kctd19 (MGP_PahariEiJ_G0023080) #37
Rat	MODERN SPECIES	10	Nfatc3 (ENSRNOG00000054264)	Dus2 (ENSRNOG00000019819)	Ddx28 (ENSRNOG00000019817)	Dpep2nb (ENSRNOG00000066666)	Dpep2 (ENSRNOG00000023303) #9	Dpep3 (ENSRNOG00000019757) #10	Slc12a4 (ENSRNOG00000019651) #11	Lcat (ENSRNOG00000019573) #12	Ctrl (ENSRNOG00000019353) #13	Pskh1 (ENSRNOG00000019290) #15	Edc4 (ENSRNOG00000024025) #17	Nutf2 (ENSRNOG00000018945) #18	Thap11 (ENSRNOG00000019109) #19	Cenpt (ENSRNOG00000024178) #20	Tsnaxip1 (ENSRNOG00000018954) #21	Ranbp10 (ENSRNOG00000018000) #22	Gfod2 (ENSRNOG00000017953) #23	C19h16orf86 (ENSRNOG00000017867) #24	Enkd1 (ENSRNOG00000024364) #25	Pard6a (ENSRNOG00000017746) #26	Acd (ENSRNOG00000038973) #27	Carmil2 (ENSRNOG00000024452) #28	Ctcf (ENSRNOG00000017674) #29	Ripor1 (ENSRNOG00000017604) #30	ENSRNOG00000064062	Agrp (ENSRNOG00000039001) #31	Atp6v0d1 (ENSRNOG00000017235) #32	Hsd11b2 (ENSRNOG00000017084) #33	Zdhhc1 (ENSRNOG00000017045) #34	Tppp3 (ENSRNOG00000016890) #35	Lrrc36 (ENSRNOG00000016854) #36
Cricetidae	DUPLICATION
Cricetidae	ANCESTRAL SPECIES	83															ENSGT00940000165060	ENSGT00940000158257.i #22
Cricetinae	ANCESTRAL SPECIES	89															ENSGT00940000165060	ENSGT00940000158257.i #22
Golden Hamster	MODERN SPECIES	678	Slc7a6 (ENSMAUG00000012105)	Pla2g15 (ENSMAUG00000008584)	Esrp2 (ENSMAUG00000003796)	ENSMAUG00000014488	ENSMAUG00000007426	Slc12a4 (ENSMAUG00000012613) #11	Lcat (ENSMAUG00000008897) #12	Ctrl (ENSMAUG00000009259) #14	Pskh1 (ENSMAUG00000020327) #15	Nrn1l (ENSMAUG00000014276) #16	Edc4 (ENSMAUG00000020196) #17	ENSMAUG00000003769 #18	Thap11 (ENSMAUG00000006431) #19	Cenpt (ENSMAUG00000019766) #20	ENSMAUG00000020455	ENSMAUG00000017465 #22	ENSMAUG00000012584 #23	4933405L10Rik (ENSMAUG00000019530) #24	Enkd1 (ENSMAUG00000008931) #25	Pard6a (ENSMAUG00000008612) #26	Acd (ENSMAUG00000009516) #27	ENSMAUG00000011505 #28	Ctcf (ENSMAUG00000011685) #29	Ripor1 (ENSMAUG00000021602) #30	Agrp (ENSMAUG00000011410) #31	ENSMAUG00000021118 #32	Hsd11b2 (ENSMAUG00000019347) #33	Zdhhc1 (ENSMAUG00000017868) #34	Tppp3 (ENSMAUG00000014950) #35	Lrrc36 (ENSMAUG00000016327) #36	Kctd19 (ENSMAUG00000014378) #37
Cricetidae	ANCESTRAL SPECIES	7	ENSGT00940000161738	ENSGT00740000117161.g	ENSGT00940000160211 #9	ENSGT00940000162331 #10	ENSGT00940000157672 #11	ENSGT00940000160052 #12	ENSGT00940000161047 #13	ENSGT00940000154494.b #14	ENSGT00940000157041.a #15	ENSGT00530000063853.a.b #16	ENSGT00510000047791 #17	ENSGT00510000047030 #18	ENSGT00390000006585 #19	ENSGT00390000003044 #20	ENSGT00390000018598 #21	ENSGT00940000158257.j #22	ENSGT00940000156501 #23	ENSGT00390000011138 #24	ENSGT00940000153866.B #25	ENSGT00950000183211.a.a.b #26	ENSGT00390000004877 #27	ENSGT00940000161003 #28	ENSGT00940000156672 #29	ENSGT00940000153717.b #30	ENSGT00940000154258.b #31	ENSGT00390000002200.a.a #32	ENSGT00940000159716 #33	ENSGT00940000159191 #34	ENSGT00940000153875.d.b #35	ENSGT00530000063884.b #36	ENSGT00390000007606 #37
Cricetidae_B	ANCESTRAL SPECIES	5	ENSGT00940000161738	ENSGT00740000117161.g	ENSGT00940000160211 #9	ENSGT00940000162331 #10	ENSGT00940000157672 #11	ENSGT00940000160052 #12	ENSGT00940000161047 #13	ENSGT00940000154494.b #14	ENSGT00940000157041.a #15	ENSGT00530000063853.a.b #16	ENSGT00510000047791 #17	ENSGT00510000047030 #18	ENSGT00390000006585 #19	ENSGT00390000003044 #20	ENSGT00390000018598 #21	ENSGT00940000158257.j #22	ENSGT00940000156501 #23	ENSGT00390000011138 #24	ENSGT00940000153866.B #25	ENSGT00950000183211.a.a.b #26	ENSGT00390000004877 #27	ENSGT00940000161003 #28	ENSGT00940000156672 #29	ENSGT00940000153717.b #30	ENSGT00940000154258.b #31	ENSGT00390000002200.a.a #32	ENSGT00940000159716 #33	ENSGT00940000159191 #34	ENSGT00940000153875.d.b #35	ENSGT00530000063884.b #36	ENSGT00390000007606 #37
Prairie vole	MODERN SPECIES	12	Dus2 (ENSMOCG00000012829)	Ddx28 (ENSMOCG00000009815)	Dpep2 (ENSMOCG00000005302) #9	Dpep3 (ENSMOCG00000005099) #10	Slc12a4 (ENSMOCG00000011067) #11	Lcat (ENSMOCG00000008431) #12	Psmb10 (ENSMOCG00000009667) #13	Ctrl (ENSMOCG00000014759) #14	Pskh1 (ENSMOCG00000020445) #15	Nrn1l (ENSMOCG00000020925) #16	Edc4 (ENSMOCG00000021073) #17	ENSMOCG00000019909 #18	Thap11 (ENSMOCG00000009056) #19	Cenpt (ENSMOCG00000021308) #20	Tsnaxip1 (ENSMOCG00000002589) #21	Ranbp10 (ENSMOCG00000015337) #22	Gfod2 (ENSMOCG00000017638) #23	4933405L10Rik (ENSMOCG00000018173) #24	Enkd1 (ENSMOCG00000014176) #25	Pard6a (ENSMOCG00000016391) #26	Acd (ENSMOCG00000019926) #27	ENSMOCG00000015028 #28	Ctcf (ENSMOCG00000021276) #29	Ripor1 (ENSMOCG00000013026) #30	Agrp (ENSMOCG00000008086) #31	ENSMOCG00000001313 #32	Hsd11b2 (ENSMOCG00000002599) #33	Zdhhc1 (ENSMOCG00000022202) #34	Tppp3 (ENSMOCG00000022557) #35	Lrrc36 (ENSMOCG00000001566) #36	Kctd19 (ENSMOCG00000013085) #37
Northern American deer mouse	MODERN SPECIES	18	Ddx28 (ENSPEMG00000003395)	Dpep2nb (ENSPEMG00000027429)	Dpep2 (ENSPEMG00000014790) #9	Dpep3 (ENSPEMG00000013959) #10	Slc12a4 (ENSPEMG00000018749) #11	Lcat (ENSPEMG00000007513) #12	Psmb10 (ENSPEMG00000009058) #13	Ctrl (ENSPEMG00000013513) #14	Pskh1 (ENSPEMG00000000279) #15	Nrn1l (ENSPEMG00000013533) #16	Edc4 (ENSPEMG00000004965) #17	ENSPEMG00000011558 #18	Thap11 (ENSPEMG00000009354) #19	Cenpt (ENSPEMG00000013987) #20	Tsnaxip1 (ENSPEMG00000011772) #21	Ranbp10 (ENSPEMG00000004326) #22	Gfod2 (ENSPEMG00000019083) #23	4933405L10Rik (ENSPEMG00000018093) #24	Enkd1 (ENSPEMG00000000494) #25	Pard6a (ENSPEMG00000010164) #26	Acd (ENSPEMG00000013098) #27	Carmil2 (ENSPEMG00000029391) #28	Ctcf (ENSPEMG00000018300) #29	Ripor1 (ENSPEMG00000014437) #30	Agrp (ENSPEMG00000026382) #31	Atp6v0d1 (ENSPEMG00000010243) #32	Hsd11b2 (ENSPEMG00000014235) #33	Zdhhc1 (ENSPEMG00000014208) #34	Tppp3 (ENSPEMG00000016560) #35	Lrrc36 (ENSPEMG00000016059) #36	Kctd19 (ENSPEMG00000012851) #37
Cricetinae	ANCESTRAL SPECIES	16	ENSGT00550000075019	ENSGT00940000161738	ENSGT00940000160211 #9	ENSGT00940000162331 #10	ENSGT00940000157672 #11	ENSGT00940000160052 #12	ENSGT00940000161047 #13	ENSGT00940000154494.b #14	ENSGT00940000157041.a #15	ENSGT00530000063853.a.b #16	ENSGT00510000047791 #17	ENSGT00510000047030 #18	ENSGT00390000006585 #19	ENSGT00390000003044 #20	ENSGT00390000018598 #21	ENSGT00940000158257.j #22	ENSGT00940000156501 #23	ENSGT00390000011138 #24	ENSGT00940000153866.B #25	ENSGT00950000183211.a.a.b #26	ENSGT00390000004877 #27	ENSGT00940000161003 #28	ENSGT00940000156672 #29	ENSGT00940000153717.b #30	ENSGT00940000154258.b #31	ENSGT00390000002200.a.a #32	ENSGT00940000159716 #33	ENSGT00940000159191 #34	ENSGT00940000153875.d.b #35	ENSGT00530000063884.b #36	ENSGT00390000007606 #37
Golden Hamster	MODERN SPECIES	135																Ranbp10 (ENSMAUG00000009762) #22
Chinese hamster chok1gshd	MODERN SPECIES	112	Dus2 (ENSCGRG00001012463)	Ddx28 (ENSCGRG00001024412)	Dpep2 (ENSCGRG00001015348) #9	Dpep3 (ENSCGRG00001011671) #10	Slc12a4 (ENSCGRG00001015463) #11	Lcat (ENSCGRG00001010146) #12	Psmb10 (ENSCGRG00001009850) #13	Ctrl (ENSCGRG00001020569) #14	Pskh1 (ENSCGRG00001014201) #15	Nrn1l (ENSCGRG00001011358) #16	Edc4 (ENSCGRG00001009023) #17	ENSCGRG00001015597 #18	Thap11 (ENSCGRG00001009747) #19	Cenpt (ENSCGRG00001021344) #20	Tsnaxip1 (ENSCGRG00001005268) #21	Ranbp10 (ENSCGRG00001000685) #22	Gfod2 (ENSCGRG00001001294) #23	4933405L10Rik (ENSCGRG00001021520) #24	Enkd1 (ENSCGRG00001015941) #25	Pard6a (ENSCGRG00001019709) #26	ENSCGRG00001010071 #27	Carmil2 (ENSCGRG00001009353) #28	Ctcf (ENSCGRG00001006622) #29	Ripor1 (ENSCGRG00001017908) #30	Agrp (ENSCGRG00001016032) #31	Atp6v0d1 (ENSCGRG00001014538) #32	Hsd11b2 (ENSCGRG00001022477) #33	Zdhhc1 (ENSCGRG00001006487) #34	Tppp3 (ENSCGRG00001012944) #35	Lrrc36 (ENSCGRG00001000114) #36	Kctd19 (ENSCGRG00001024518) #37
Rodentia_A	ANCESTRAL SPECIES	6	ENSGT00940000161738	ENSGT00740000117161	ENSGT00940000160211 #9	ENSGT00940000162331 #10	ENSGT00940000157672 #11	ENSGT00940000160052 #12	ENSGT00940000161047 #13	ENSGT00940000154494.b #14	ENSGT00940000157041.a #15	ENSGT00530000063853.a.b #16	ENSGT00510000047791 #17	ENSGT00510000047030 #18	ENSGT00390000006585 #19	ENSGT00390000003044 #20	ENSGT00390000018598 #21	ENSGT00940000158257 #22	ENSGT00940000156501 #23	ENSGT00390000011138 #24	ENSGT00940000153866.B #25	ENSGT00950000183211.a.a.b #26	ENSGT00390000004877 #27	ENSGT00940000161003 #28	ENSGT00940000156672 #29	ENSGT00940000153717.b #30	ENSGT00940000154258.b #31	ENSGT00390000002200.a.a #32	ENSGT00940000159716 #33	ENSGT00940000159191 #34	ENSGT00940000153875.d.b #35	ENSGT00530000063884.b #36	ENSGT00390000007606 #37
Hystricomorpha	ANCESTRAL SPECIES	22	ENSGT00940000161738	ENSGT00740000117161	ENSGT00940000160211 #9	ENSGT00940000162331 #10	ENSGT00940000157672 #11	ENSGT00940000160052 #12	ENSGT00940000161047 #13	ENSGT00940000154494.b #14	ENSGT00940000157041.a #15	ENSGT00530000063853.a.b #16	ENSGT00510000047791 #17	ENSGT00510000047030 #18	ENSGT00390000006585 #19	ENSGT00390000003044 #20	ENSGT00390000018598 #21	ENSGT00940000158257 #22	ENSGT00940000156501 #23	ENSGT00390000011138 #24	ENSGT00940000153866.B #25	ENSGT00950000183211.a.a.b #26	ENSGT00390000004877 #27	ENSGT00940000161003 #28	ENSGT00940000156672 #29	ENSGT00940000153717.b #30	ENSGT00940000154258.b #31	ENSGT00390000002200.a.a #32	ENSGT00940000159716 #33	ENSGT00940000159191 #34	ENSGT00940000153875.d.b #35	ENSGT00530000063884.b #36	ENSGT00390000007606 #37
Hystricomorpha_a	ANCESTRAL SPECIES	22	ENSGT00550000075019	ENSGT00940000161738	ENSGT00940000160211 #9	ENSGT00940000162331 #10	ENSGT00940000157672 #11	ENSGT00940000160052 #12	ENSGT00940000161047 #13	ENSGT00940000154494.b #14	ENSGT00940000157041.a #15	ENSGT00530000063853.a.b #16	ENSGT00510000047791 #17	ENSGT00510000047030 #18	ENSGT00390000006585 #19	ENSGT00390000003044 #20	ENSGT00390000018598 #21	ENSGT00940000158257 #22	ENSGT00940000156501 #23	ENSGT00390000011138 #24	ENSGT00940000153866.B #25	ENSGT00950000183211.a.a.b #26	ENSGT00390000004877 #27	ENSGT00940000161003 #28	ENSGT00940000156672 #29	ENSGT00940000153717.b #30	ENSGT00940000154258.b #31	ENSGT00390000002200.a.a #32	ENSGT00940000159716 #33	ENSGT00940000159191 #34	ENSGT00940000153875.d.b #35	ENSGT00530000063884.b #36	ENSGT00390000007606 #37
Hystricomorpha_b	ANCESTRAL SPECIES	15	ENSGT00940000156131.a.b	ENSGT00550000075019	ENSGT00940000160211 #9	ENSGT00940000162331 #10	ENSGT00940000157672 #11	ENSGT00940000160052 #12	ENSGT00940000161047 #13	ENSGT00940000154494.b #14	ENSGT00940000157041.a #15	ENSGT00530000063853.a.b #16	ENSGT00510000047791 #17	ENSGT00510000047030 #18	ENSGT00390000006585 #19	ENSGT00390000003044 #20	ENSGT00390000018598 #21	ENSGT00940000158257 #22	ENSGT00940000156501 #23	ENSGT00390000011138 #24	ENSGT00940000153866.B #25	ENSGT00950000183211.a.a.b #26	ENSGT00390000004877 #27	ENSGT00940000161003 #28	ENSGT00940000156672 #29	ENSGT00940000153717.b #30	ENSGT00940000154258.b #31	ENSGT00390000002200.a.a #32	ENSGT00940000159716 #33	ENSGT00940000159191 #34	ENSGT00940000153875.d.b #35	ENSGT00530000063884.b #36	ENSGT00390000007606 #37
Degu	DUPLICATION
Degu	MODERN SPECIES	52	NFATC3 (ENSODEG00000016236)	ENSODEG00000014981	DPEP2 (ENSODEG00000015603) #9	DPEP3 (ENSODEG00000015502) #10	SLC12A4 (ENSODEG00000014903) #11	LCAT (ENSODEG00000015459) #12	PSMB10 (ENSODEG00000015334) #13	CTRL (ENSODEG00000015418) #14	PSKH1 (ENSODEG00000014963) #15	NRN1L (ENSODEG00000015052) #16	EDC4 (ENSODEG00000016124) #17	ENSODEG00000015563 #18	THAP11 (ENSODEG00000020413) #19	CENPT (ENSODEG00000014887) #20	TSNAXIP1 (ENSODEG00000015876) #21	ENSODEG00000015170 #22	GFOD2 (ENSODEG00000015818) #23	C16orf86 (ENSODEG00000015580) #24	ENKD1 (ENSODEG00000015181) #25	PARD6A (ENSODEG00000015521) #26	ACD (ENSODEG00000015820) #27	CARMIL2 (ENSODEG00000015455) #28	CTCF (ENSODEG00000016253) #29	ENSODEG00000020360	RIPOR1 (ENSODEG00000015970) #30	ENSODEG00000020348	AGRP (ENSODEG00000015217) #31	ATP6V0D1 (ENSODEG00000016167) #32	HSD11B2 (ENSODEG00000015795) #33	ZDHHC1 (ENSODEG00000015615) #34	TPPP3 (ENSODEG00000016027) #35
Degu	MODERN SPECIES	384													ENSODEG00000000641	RLIM (ENSODEG00000000624)	SLC16A2 (ENSODEG00000000584)	ENSODEG00000018593 #22	ENSODEG00000000530
Long-tailed chinchilla	MODERN SPECIES	191	NFATC3 (ENSCLAG00000003546)	DUS2 (ENSCLAG00000004546)	DPEP2 (ENSCLAG00000005390) #9	DPEP3 (ENSCLAG00000016921) #10	SLC12A4 (ENSCLAG00000010616) #11	LCAT (ENSCLAG00000007185) #12	PSMB10 (ENSCLAG00000007461) #13	CTRL (ENSCLAG00000007558) #14	PSKH1 (ENSCLAG00000003170) #15	NRN1L (ENSCLAG00000003203) #16	EDC4 (ENSCLAG00000003614) #17	NUTF2 (ENSCLAG00000005377) #18	THAP11 (ENSCLAG00000017645) #19	CENPT (ENSCLAG00000005547) #20	TSNAXIP1 (ENSCLAG00000006090) #21	RANBP10 (ENSCLAG00000003887) #22	GFOD2 (ENSCLAG00000005850) #23	C16orf86 (ENSCLAG00000005955) #24	ENKD1 (ENSCLAG00000006133) #25	PARD6A (ENSCLAG00000006485) #26	ACD (ENSCLAG00000005336) #27	CARMIL2 (ENSCLAG00000005777) #28	CTCF (ENSCLAG00000008522) #29	ENSCLAG00000008635	RIPOR1 (ENSCLAG00000016244) #30	AGRP (ENSCLAG00000012740) #31	ATP6V0D1 (ENSCLAG00000003151) #32	HSD11B2 (ENSCLAG00000003883) #33	ZDHHC1 (ENSCLAG00000004092) #34	TPPP3 (ENSCLAG00000004256) #35	LRRC36 (ENSCLAG00000004344) #36
Guinea pig	MODERN SPECIES	22	ESRP2 (ENSCPOG00000003360)	NFATC3 (ENSCPOG00000031124)	DUS2 (ENSCPOG00000013747)	DDX28 (ENSCPOG00000013746)	DPEP3 (ENSCPOG00000005908) #10	SLC12A4 (ENSCPOG00000011721) #11	LCAT (ENSCPOG00000024823) #12	PSMB10 (ENSCPOG00000021270) #13	PSKH1 (ENSCPOG00000013930) #15	NRN1L (ENSCPOG00000005356) #16	EDC4 (ENSCPOG00000019484) #17	NUTF2 (ENSCPOG00000037906) #18	THAP11 (ENSCPOG00000001016) #19	CENPT (ENSCPOG00000001013) #20	TSNAXIP1 (ENSCPOG00000022543) #21	RANBP10 (ENSCPOG00000010735) #22	GFOD2 (ENSCPOG00000039335) #23	C16orf86 (ENSCPOG00000027376) #24	ENKD1 (ENSCPOG00000010732) #25	PARD6A (ENSCPOG00000010729) #26	ACD (ENSCPOG00000010719) #27	CARMIL2 (ENSCPOG00000010704) #28	CTCF (ENSCPOG00000010698) #29	RIPOR1 (ENSCPOG00000004238) #30	AGRP (ENSCPOG00000010909) #31	ATP6V0D1 (ENSCPOG00000010904) #32	HSD11B2 (ENSCPOG00000010894) #33	ZDHHC1 (ENSCPOG00000040494) #34	TPPP3 (ENSCPOG00000010883) #35	LRRC36 (ENSCPOG00000010878) #36	KCTD19 (ENSCPOG00000010870) #37
Naked mole-rat female	MODERN SPECIES	26	ENSHGLG00000010106	DPEP3 (ENSHGLG00000013542) #10	SLC12A4 (ENSHGLG00000014889) #11	LCAT (ENSHGLG00000011794) #12	PSMB10 (ENSHGLG00000012273) #13	CTRL (ENSHGLG00000012832) #14	ENSHGLG00000037690	ENSHGLG00000033269	PSKH1 (ENSHGLG00000013365) #15	NRN1L (ENSHGLG00000050777) #16	EDC4 (ENSHGLG00000016833) #17	NUTF2 (ENSHGLG00000035289) #18	THAP11 (ENSHGLG00000009864) #19	ENSHGLG00000010478 #20	TSNAXIP1 (ENSHGLG00000012279) #21	RANBP10 (ENSHGLG00000014405) #22	ENSHGLG00000039037	GFOD2 (ENSHGLG00000011082) #23	C16orf86 (ENSHGLG00000045293) #24	ENKD1 (ENSHGLG00000014665) #25	PARD6A (ENSHGLG00000035759) #26	ACD (ENSHGLG00000038146) #27	CARMIL2 (ENSHGLG00000016247) #28	CTCF (ENSHGLG00000010775) #29	RIPOR1 (ENSHGLG00000012465) #30	AGRP (ENSHGLG00000010211) #31	ATP6V0D1 (ENSHGLG00000011430) #32	HSD11B2 (ENSHGLG00000012026) #33	ZDHHC1 (ENSHGLG00000012449) #34	TPPP3 (ENSHGLG00000011640) #35	LRRC36 (ENSHGLG00000013489) #36
Sciuridae	ANCESTRAL SPECIES	5	ENSGT00940000161738	ENSGT00740000117161	ENSGT00940000160211 #9	ENSGT00940000162331 #10	ENSGT00940000157672 #11	ENSGT00940000160052 #12	ENSGT00940000161047 #13	ENSGT00940000154494.b #14	ENSGT00940000157041.a #15	ENSGT00530000063853.a.b #16	ENSGT00510000047791 #17	ENSGT00510000047030 #18	ENSGT00390000006585 #19	ENSGT00390000003044 #20	ENSGT00390000018598 #21	ENSGT00940000158257 #22	ENSGT00940000156501 #23	ENSGT00390000011138 #24	ENSGT00940000153866.B #25	ENSGT00950000183211.a.a.b #26	ENSGT00390000004877 #27	ENSGT00940000161003 #28	ENSGT00940000156672 #29	ENSGT00940000153717.b #30	ENSGT00940000154258.b #31	ENSGT00390000002200.a.a #32	ENSGT00940000159716 #33	ENSGT00940000159191 #34	ENSGT00940000153875.d.b #35	ENSGT00530000063884.b #36	ENSGT00390000007606 #37
Marmotini	ANCESTRAL SPECIES	17	ENSGT00940000161738	ENSGT00740000117161.k.b	ENSGT00940000160211 #9	ENSGT00940000162331 #10	ENSGT00940000157672 #11	ENSGT00940000160052 #12	ENSGT00940000161047 #13	ENSGT00940000154494.b #14	ENSGT00940000157041.a #15	ENSGT00530000063853.a.b #16	ENSGT00510000047791 #17	ENSGT00510000047030 #18	ENSGT00390000006585 #19	ENSGT00390000003044 #20	ENSGT00390000018598 #21	ENSGT00940000158257 #22	ENSGT00940000156501 #23	ENSGT00390000011138 #24	ENSGT00940000153866.B #25	ENSGT00950000183211.a.a.b #26	ENSGT00390000004877 #27	ENSGT00940000161003 #28	ENSGT00940000156672 #29	ENSGT00940000153717.b #30	ENSGT00940000154258.b #31	ENSGT00390000002200.a.a #32	ENSGT00940000159716 #33	ENSGT00940000159191 #34	ENSGT00940000153875.d.b #35	ENSGT00530000063884.b #36	ENSGT00390000007606 #37
Marmotini_b	ANCESTRAL SPECIES	7	ENSGT00940000161738	ENSGT00740000117161.k.b	ENSGT00940000160211 #9	ENSGT00940000162331 #10	ENSGT00940000157672 #11	ENSGT00940000160052 #12	ENSGT00940000161047 #13	ENSGT00940000154494.b #14	ENSGT00940000157041.a #15	ENSGT00530000063853.a.b #16	ENSGT00510000047791 #17	ENSGT00510000047030 #18	ENSGT00390000006585 #19	ENSGT00390000003044 #20	ENSGT00390000018598 #21	ENSGT00940000158257 #22	ENSGT00940000156501 #23	ENSGT00390000011138 #24	ENSGT00940000153866.B #25	ENSGT00950000183211.a.a.b #26	ENSGT00390000004877 #27	ENSGT00940000161003 #28	ENSGT00940000156672 #29	ENSGT00940000153717.b #30	ENSGT00940000154258.b #31	ENSGT00390000002200.a.a #32	ENSGT00940000159716 #33	ENSGT00940000159191 #34	ENSGT00940000153875.d.b #35	ENSGT00530000063884.b #36	ENSGT00390000007606 #37
Squirrel	MODERN SPECIES	75	DUS2 (ENSSTOG00000002066)	DDX28 (ENSSTOG00000002064)	DPEP2 (ENSSTOG00000031323) #9	DPEP3 (ENSSTOG00000030974) #10	SLC12A4 (ENSSTOG00000002018) #11	LCAT (ENSSTOG00000021012) #12	PSMB10 (ENSSTOG00000002011) #13	CTRL (ENSSTOG00000002006) #14	PSKH1 (ENSSTOG00000001997) #15	NRN1L (ENSSTOG00000024206) #16	EDC4 (ENSSTOG00000002888) #17	NUTF2 (ENSSTOG00000002878) #18	THAP11 (ENSSTOG00000021807) #19	CENPT (ENSSTOG00000002860) #20	TSNAXIP1 (ENSSTOG00000002844) #21	RANBP10 (ENSSTOG00000002829) #22	GFOD2 (ENSSTOG00000025692) #23	C16orf86 (ENSSTOG00000019639) #24	ENKD1 (ENSSTOG00000025478) #25	PARD6A (ENSSTOG00000019905) #26	ACD (ENSSTOG00000016455) #27	CARMIL2 (ENSSTOG00000016451) #28	CTCF (ENSSTOG00000024951) #29	RIPOR1 (ENSSTOG00000025539) #30	AGRP (ENSSTOG00000016448) #31	ATP6V0D1 (ENSSTOG00000016447) #32	HSD11B2 (ENSSTOG00000016446) #33	ZDHHC1 (ENSSTOG00000016445) #34	TPPP3 (ENSSTOG00000020378) #35	LRRC36 (ENSSTOG00000016443) #36	KCTD19 (ENSSTOG00000016442) #37
Arctic ground squirrel	MODERN SPECIES	575	DDX28 (ENSUPAG00010000207)	DPEP2NB (ENSUPAG00010000220)	DPEP2 (ENSUPAG00010000233) #9	DPEP3 (ENSUPAG00010000258) #10	SLC12A4 (ENSUPAG00010000322) #11	LCAT (ENSUPAG00010000414) #12	PSMB10 (ENSUPAG00010000439) #13	CTRL (ENSUPAG00010000468) #14	PSKH1 (ENSUPAG00010000487) #15	NRN1L (ENSUPAG00010000501) #16	EDC4 (ENSUPAG00010000508) #17	NUTF2 (ENSUPAG00010000564) #18	THAP11 (ENSUPAG00010000573) #19	CENPT (ENSUPAG00010000580) #20	TSNAXIP1 (ENSUPAG00010000604) #21	RANBP10 (ENSUPAG00010000688) #22	ENSUPAG00010000709	ENSUPAG00010000722	ENKD1 (ENSUPAG00010000767) #25	C16orf86 (ENSUPAG00010000804) #24	PARD6A (ENSUPAG00010000817) #26	ACD (ENSUPAG00010000847) #27	CARMIL2 (ENSUPAG00010000874) #28	CTCF (ENSUPAG00010000926) #29	RIPOR1 (ENSUPAG00010000952) #30	AGRP (ENSUPAG00010001009) #31	ATP6V0D1 (ENSUPAG00010001017) #32	HSD11B2 (ENSUPAG00010001038) #33	ZDHHC1 (ENSUPAG00010001056) #34	TPPP3 (ENSUPAG00010001128) #35	LRRC36 (ENSUPAG00010001167) #36
Alpin marmot	MODERN SPECIES	43	DDX28 (ENSMMMG00000014578)	ENSMMMG00000014583	DPEP2 (ENSMMMG00000014585) #9	DPEP3 (ENSMMMG00000014599) #10	SLC12A4 (ENSMMMG00000014662) #11	LCAT (ENSMMMG00000014708) #12	PSMB10 (ENSMMMG00000014711) #13	CTRL (ENSMMMG00000014719) #14	PSKH1 (ENSMMMG00000014727) #15	NRN1L (ENSMMMG00000014733) #16	EDC4 (ENSMMMG00000014739) #17	NUTF2 (ENSMMMG00000014783) #18	THAP11 (ENSMMMG00000014790) #19	CENPT (ENSMMMG00000014796) #20	TSNAXIP1 (ENSMMMG00000014864) #21	RANBP10 (ENSMMMG00000014909) #22	GFOD2 (ENSMMMG00000014932) #23	C16orf86 (ENSMMMG00000014934) #24	ENKD1 (ENSMMMG00000014940) #25	PARD6A (ENSMMMG00000014948) #26	ACD (ENSMMMG00000014963) #27	CARMIL2 (ENSMMMG00000015024) #28	ENSMMMG00000015070 #29	ENSMMMG00000015080 #29	RIPOR1 (ENSMMMG00000015092) #30	AGRP (ENSMMMG00000015111) #31	ATP6V0D1 (ENSMMMG00000015116) #32	HSD11B2 (ENSMMMG00000015122) #33	ZDHHC1 (ENSMMMG00000015133) #34	TPPP3 (ENSMMMG00000015157) #35	LRRC36 (ENSMMMG00000015167) #36
Eurasian red squirrel	MODERN SPECIES	8	ENSSVLG00005020570	ENSSVLG00005020601	ENSSVLG00005020635	DDX28 (ENSSVLG00005020667)	DPEP2 (ENSSVLG00005020743) #9	DPEP3 (ENSSVLG00005020836) #10	SLC12A4 (ENSSVLG00005021064) #11	PSMB10 (ENSSVLG00005021819) #13	CTRL (ENSSVLG00005021883) #14	ENSSVLG00005021936 #15	EDC4 (ENSSVLG00005021977) #17	ENSSVLG00005022085 #18	THAP11 (ENSSVLG00005022120) #19	ENSSVLG00005022140	TSNAXIP1 (ENSSVLG00005022206) #21	RANBP10 (ENSSVLG00005022335) #22	ENSSVLG00005022377	GFOD2 (ENSSVLG00005022417) #23	C16orf86 (ENSSVLG00005022462) #24	ENKD1 (ENSSVLG00005022506) #25	PARD6A (ENSSVLG00005022571) #26	ACD (ENSSVLG00005022621) #27	CARMIL2 (ENSSVLG00005022765) #28	CTCF (ENSSVLG00005023014) #29	RIPOR1 (ENSSVLG00005023066) #30	AGRP (ENSSVLG00005023129) #31	ATP6V0D1 (ENSSVLG00005023162) #32	HSD11B2 (ENSSVLG00005023211) #33	ZDHHC1 (ENSSVLG00005023237) #34	TPPP3 (ENSSVLG00005023292) #35	LRRC36 (ENSSVLG00005023340) #36
Laurasiatheria	ANCESTRAL SPECIES	5	ENSGT00940000161738	ENSGT00740000117161	ENSGT00940000160211 #9	ENSGT00940000162331 #10	ENSGT00940000157672 #11	ENSGT00940000160052 #12	ENSGT00940000161047 #13	ENSGT00940000154494.b #14	ENSGT00940000157041.a #15	ENSGT00530000063853.a.b #16	ENSGT00510000047791 #17	ENSGT00510000047030 #18	ENSGT00390000006585 #19	ENSGT00390000003044 #20	ENSGT00390000018598 #21	ENSGT00940000158257 #22	ENSGT00940000156501 #23	ENSGT00390000011138 #24	ENSGT00940000153866.B #25	ENSGT00950000183211.a.a.b #26	ENSGT00390000004877 #27	ENSGT00940000161003 #28	ENSGT00940000156672 #29	ENSGT00940000153717.b #30	ENSGT00940000154258.b #31	ENSGT00390000002200.a.a #32	ENSGT00940000159716 #33	ENSGT00940000159191 #34	ENSGT00940000153875.d.b #35	ENSGT00530000063884.b #36	ENSGT00390000007606 #37
Laurasiatheria_a	ANCESTRAL SPECIES	5	ENSGT00940000161738	ENSGT00740000117161	ENSGT00940000160211 #9	ENSGT00940000162331 #10	ENSGT00940000157672 #11	ENSGT00940000160052 #12	ENSGT00940000161047 #13	ENSGT00940000154494.b #14	ENSGT00940000157041.a #15	ENSGT00530000063853.a.b #16	ENSGT00510000047791 #17	ENSGT00510000047030 #18	ENSGT00390000006585 #19	ENSGT00390000003044 #20	ENSGT00390000018598 #21	ENSGT00940000158257 #22	ENSGT00940000156501 #23	ENSGT00390000011138 #24	ENSGT00940000153866.B #25	ENSGT00950000183211.a.a.b #26	ENSGT00390000004877 #27	ENSGT00940000161003 #28	ENSGT00940000156672 #29	ENSGT00940000153717.b #30	ENSGT00940000154258.b #31	ENSGT00390000002200.a.a #32	ENSGT00940000159716 #33	ENSGT00940000159191 #34	ENSGT00940000153875.d.b #35	ENSGT00530000063884.b #36	ENSGT00390000007606 #37
Artiodactyla	ANCESTRAL SPECIES	5	ENSGT00940000161738	ENSGT00740000117161	ENSGT00940000160211 #9	ENSGT00940000162331 #10	ENSGT00940000157672 #11	ENSGT00940000160052 #12	ENSGT00940000161047 #13	ENSGT00940000154494.b #14	ENSGT00940000157041.a #15	ENSGT00530000063853.a.b #16	ENSGT00510000047791 #17	ENSGT00510000047030 #18	ENSGT00390000006585 #19	ENSGT00390000003044 #20	ENSGT00390000018598 #21	ENSGT00940000158257 #22	ENSGT00940000156501 #23	ENSGT00390000011138 #24	ENSGT00940000153866.B #25	ENSGT00950000183211.a.a.b #26	ENSGT00390000004877 #27	ENSGT00940000161003 #28	ENSGT00940000156672 #29	ENSGT00940000153717.b #30	ENSGT00940000154258.b #31	ENSGT00390000002200.a.a #32	ENSGT00940000159716 #33	ENSGT00940000159191 #34	ENSGT00940000153875.d.b #35	ENSGT00530000063884.b #36	ENSGT00390000007606 #37
Suina	ANCESTRAL SPECIES	2	ENSGT00940000161738	ENSGT00740000117161	ENSGT00940000160211 #9	ENSGT00940000162331 #10	ENSGT00940000157672 #11	ENSGT00940000160052 #12	ENSGT00940000161047 #13	ENSGT00940000154494.b #14	ENSGT00940000157041.a #15	ENSGT00530000063853.a.b #16	ENSGT00510000047791 #17	ENSGT00510000047030 #18	ENSGT00390000006585 #19	ENSGT00390000003044 #20	ENSGT00390000018598 #21	ENSGT00940000158257 #22	ENSGT00940000156501 #23	ENSGT00390000011138 #24	ENSGT00940000153866.B #25	ENSGT00950000183211.a.a.b #26	ENSGT00390000004877 #27	ENSGT00940000161003 #28	ENSGT00940000156672 #29	ENSGT00940000153717.b #30	ENSGT00940000154258.b #31	ENSGT00390000002200.a.a #32	ENSGT00940000159716 #33	ENSGT00940000159191 #34	ENSGT00940000153875.d.b #35	ENSGT00530000063884.b #36	ENSGT00390000007606 #37
Pig	MODERN SPECIES	14	DDX28 (ENSSSCG00000026038)	DPEP2NB (ENSSSCG00000042073)	DPEP2 (ENSSSCG00000021105) #9	DPEP3 (ENSSSCG00000023514) #10	SLC12A4 (ENSSSCG00000028609) #11	LCAT (ENSSSCG00000028350) #12	PSMB10 (ENSSSCG00000031781) #13	CTRL (ENSSSCG00000023849) #14	PSKH1 (ENSSSCG00000040313) #15	NRN1L (ENSSSCG00000055661) #16	EDC4 (ENSSSCG00000002771) #17	NUTF2 (ENSSSCG00000030295) #18	THAP11 (ENSSSCG00000002769) #19	CENPT (ENSSSCG00000002768) #20	TSNAXIP1 (ENSSSCG00000002767) #21	RANBP10 (ENSSSCG00000021803) #22	GFOD2 (ENSSSCG00000024750) #23	C16orf86 (ENSSSCG00000021711) #24	ENKD1 (ENSSSCG00000028661) #25	PARD6A (ENSSSCG00000034863) #26	ACD (ENSSSCG00000029590) #27	CARMIL2 (ENSSSCG00000022722) #28	CTCF (ENSSSCG00000024253) #29	AGRP (ENSSSCG00000002775) #31	RIPOR1 (ENSSSCG00000002774) #30	ATP6V0D1 (ENSSSCG00000002776) #32	HSD11B2 (ENSSSCG00000002777) #33	ZDHHC1 (ENSSSCG00000002778) #34	TPPP3 (ENSSSCG00000035983) #35	LRRC36 (ENSSSCG00000002779) #36	KCTD19 (ENSSSCG00000002781) #37
Chacoan peccary	MODERN SPECIES	106				DPEP2 (ENSCWAG00000006863) #9	SLC12A4 (ENSCWAG00000005653) #11	LCAT (ENSCWAG00000005554) #12	PSMB10 (ENSCWAG00000005513) #13	CTRL (ENSCWAG00000005474) #14	PSKH1 (ENSCWAG00000005452) #15	NRN1L (ENSCWAG00000005429) #16	EDC4 (ENSCWAG00000005405) #17	NUTF2 (ENSCWAG00000005365) #18	THAP11 (ENSCWAG00000005350) #19	CENPT (ENSCWAG00000005275) #20	TSNAXIP1 (ENSCWAG00000005175) #21	RANBP10 (ENSCWAG00000005125) #22	GFOD2 (ENSCWAG00000005094) #23	C16orf86 (ENSCWAG00000005069) #24	ENKD1 (ENSCWAG00000005042) #25	PARD6A (ENSCWAG00000005003) #26	ACD (ENSCWAG00000004834) #27	CARMIL2 (ENSCWAG00000004647) #28	CTCF (ENSCWAG00000004594) #29	RIPOR1 (ENSCWAG00000004502) #30	AGRP (ENSCWAG00000004461) #31	ATP6V0D1 (ENSCWAG00000004436) #32	HSD11B2 (ENSCWAG00000004393) #33	ZDHHC1 (ENSCWAG00000004315) #34	TPPP3 (ENSCWAG00000004283) #35	ENSCWAG00000004252	LRRC36 (ENSCWAG00000004058) #36
Artiodactyla_a	ANCESTRAL SPECIES	4	ENSGT00940000161738	ENSGT00740000117161	ENSGT00940000160211 #9	ENSGT00940000162331 #10	ENSGT00940000157672 #11	ENSGT00940000160052 #12	ENSGT00940000161047 #13	ENSGT00940000154494.b #14	ENSGT00940000157041.a #15	ENSGT00530000063853.a.b #16	ENSGT00510000047791 #17	ENSGT00510000047030 #18	ENSGT00390000006585 #19	ENSGT00390000003044 #20	ENSGT00390000018598 #21	ENSGT00940000158257 #22	ENSGT00940000156501 #23	ENSGT00390000011138 #24	ENSGT00940000153866.B #25	ENSGT00950000183211.a.a.b #26	ENSGT00390000004877 #27	ENSGT00940000161003 #28	ENSGT00940000156672 #29	ENSGT00940000153717.b #30	ENSGT00940000154258.b #31	ENSGT00390000002200.a.a #32	ENSGT00940000159716 #33	ENSGT00940000159191 #34	ENSGT00940000153875.d.b #35	ENSGT00530000063884.b #36	ENSGT00390000007606 #37
Camelidae	ANCESTRAL SPECIES	9	ENSGT00940000161738	ENSGT00740000117161	ENSGT00940000160211 #9	ENSGT00940000162331 #10	ENSGT00940000157672 #11	ENSGT00940000160052 #12	ENSGT00940000161047 #13	ENSGT00940000154494.b #14	ENSGT00940000157041.a #15	ENSGT00530000063853.a.b #16	ENSGT00510000047791 #17	ENSGT00510000047030 #18	ENSGT00390000006585 #19	ENSGT00390000003044 #20	ENSGT00390000018598 #21	ENSGT00940000158257 #22	ENSGT00390000011138 #24	ENSGT00940000156501 #23	ENSGT00950000183211.a.a.b #26	ENSGT00390000004877 #27	ENSGT00940000161003 #28	ENSGT00940000156672 #29	ENSGT00940000153717.b #30	ENSGT00940000154258.b #31	ENSGT00390000002200.a.a #32	ENSGT00940000159716 #33	ENSGT00940000159191 #34	ENSGT00940000153875.d.b #35	ENSGT00530000063884.b #36	ENSGT00390000007606 #37	ENSGT00940000158845
Arabian camel	MODERN SPECIES	35	DUS2 (ENSCDRG00005016864)	DDX28 (ENSCDRG00005016840)	DPEP2NB (ENSCDRG00005016820)	DPEP2 (ENSCDRG00005016754) #9	DPEP3 (ENSCDRG00005016306) #10	SLC12A4 (ENSCDRG00005015235) #11	PSMB10 (ENSCDRG00005015126) #13	ENSCDRG00005015075 #14	PSKH1 (ENSCDRG00005015034) #15	NRN1L (ENSCDRG00005015001) #16	EDC4 (ENSCDRG00005014883) #17	NUTF2 (ENSCDRG00005014845) #18	THAP11 (ENSCDRG00005014821) #19	CENPT (ENSCDRG00005014640) #20	TSNAXIP1 (ENSCDRG00005014404) #21	RANBP10 (ENSCDRG00005014286) #22	C16orf86 (ENSCDRG00005014250) #24	ENSCDRG00005014103 #23	PARD6A (ENSCDRG00005014201) #26	ACD (ENSCDRG00005013873) #27	CARMIL2 (ENSCDRG00005013507) #28	CTCF (ENSCDRG00005013383) #29	RIPOR1 (ENSCDRG00005011829) #30	AGRP (ENSCDRG00005011760) #31	ATP6V0D1 (ENSCDRG00005011601) #32	HSD11B2 (ENSCDRG00005011575) #33	ZDHHC1 (ENSCDRG00005011521) #34	TPPP3 (ENSCDRG00005011501) #35	LRRC36 (ENSCDRG00005011255) #36	KCTD19 (ENSCDRG00005011106) #37	PLEKHG4 (ENSCDRG00005010841)
Alpaca	MODERN SPECIES	2146											NRN1L (ENSVPAG00000004421) #16	EDC4 (ENSVPAG00000004419) #17	NUTF2 (ENSVPAG00000004417) #18	CENPT (ENSVPAG00000004415) #20	ENSVPAG00000004414	RANBP10 (ENSVPAG00000004412) #22	C16orf86 (ENSVPAG00000004411) #24	ENSVPAG00000004410 #28	CTCF (ENSVPAG00000004409) #29	RIPOR1 (ENSVPAG00000004406) #30	ATP6V0D1 (ENSVPAG00000004404) #32	HSD11B2 (ENSVPAG00000004403) #33
Artiodactyla_b	ANCESTRAL SPECIES	4	ENSGT00940000161738	ENSGT00740000117161	ENSGT00940000160211 #9	ENSGT00940000162331 #10	ENSGT00940000157672 #11	ENSGT00940000160052 #12	ENSGT00940000161047 #13	ENSGT00940000154494.b #14	ENSGT00940000157041.a #15	ENSGT00530000063853.a.b #16	ENSGT00510000047791 #17	ENSGT00510000047030 #18	ENSGT00390000006585 #19	ENSGT00390000003044 #20	ENSGT00390000018598 #21	ENSGT00940000158257 #22	ENSGT00940000156501 #23	ENSGT00390000011138 #24	ENSGT00940000153866.B #25	ENSGT00950000183211.a.a.b #26	ENSGT00390000004877 #27	ENSGT00940000161003 #28	ENSGT00940000156672 #29	ENSGT00940000153717.b #30	ENSGT00940000154258.b #31	ENSGT00390000002200.a.a #32	ENSGT00940000159716 #33	ENSGT00940000159191 #34	ENSGT00940000153875.d.b #35	ENSGT00530000063884.b #36	ENSGT00390000007606 #37
Pecora	ANCESTRAL SPECIES	4	ENSGT00940000161738	ENSGT00740000117161	ENSGT00940000160211 #9	ENSGT00940000162331 #10	ENSGT00940000157672 #11	ENSGT00940000160052 #12	ENSGT00940000161047 #13	ENSGT00940000154494.b #14	ENSGT00940000157041.a #15	ENSGT00530000063853.a.b #16	ENSGT00510000047791 #17	ENSGT00510000047030 #18	ENSGT00390000006585 #19	ENSGT00390000003044 #20	ENSGT00390000018598 #21	ENSGT00940000158257 #22	ENSGT00940000156501 #23	ENSGT00390000011138 #24	ENSGT00940000153866.B #25	ENSGT00950000183211.a.a.b #26	ENSGT00390000004877 #27	ENSGT00940000161003 #28	ENSGT00940000156672 #29	ENSGT00940000153717.b #30	ENSGT00940000154258.b #31	ENSGT00390000002200.a.a #32	ENSGT00940000159716 #33	ENSGT00940000159191 #34	ENSGT00940000153875.d.b #35	ENSGT00530000063884.b #36	ENSGT00390000007606 #37
Percora_a	ANCESTRAL SPECIES	4	ENSGT00940000161738	ENSGT00740000117161	ENSGT00940000160211 #9	ENSGT00940000162331 #10	ENSGT00940000157672 #11	ENSGT00940000160052 #12	ENSGT00940000161047 #13	ENSGT00940000154494.b #14	ENSGT00940000157041.a #15	ENSGT00530000063853.a.b #16	ENSGT00510000047791 #17	ENSGT00510000047030 #18	ENSGT00390000006585 #19	ENSGT00390000003044 #20	ENSGT00390000018598 #21	ENSGT00940000158257 #22	ENSGT00940000156501 #23	ENSGT00390000011138 #24	ENSGT00940000153866.B #25	ENSGT00950000183211.a.a.b #26	ENSGT00390000004877 #27	ENSGT00940000161003 #28	ENSGT00940000156672 #29	ENSGT00940000153717.b #30	ENSGT00940000154258.b #31	ENSGT00390000002200.a.a #32	ENSGT00940000159716 #33	ENSGT00940000159191 #34	ENSGT00940000153875.d.b #35	ENSGT00530000063884.b #36	ENSGT00390000007606 #37
Bovidae	ANCESTRAL SPECIES	4	ENSGT00940000161738	ENSGT00740000117161	ENSGT00940000160211 #9	ENSGT00940000162331 #10	ENSGT00940000157672 #11	ENSGT00940000160052 #12	ENSGT00940000161047 #13	ENSGT00940000154494.b #14	ENSGT00940000157041.a #15	ENSGT00530000063853.a.b #16	ENSGT00510000047791 #17	ENSGT00510000047030 #18	ENSGT00390000006585 #19	ENSGT00390000003044 #20	ENSGT00390000018598 #21	ENSGT00940000158257 #22	ENSGT00940000156501 #23	ENSGT00390000011138 #24	ENSGT00940000153866.B #25	ENSGT00950000183211.a.a.b #26	ENSGT00390000004877 #27	ENSGT00940000161003.a #28	ENSGT00940000161003.b #28	ENSGT00940000156672 #29	ENSGT00940000153717.b #30	ENSGT00940000154258.b #31	ENSGT00390000002200.a.a #32	ENSGT00940000159716 #33	ENSGT00940000159191 #34	ENSGT00940000153875.d.b #35	ENSGT00530000063884.b #36
Caprinae	ANCESTRAL SPECIES	4	ENSGT00550000075019	ENSGT00940000161738	ENSGT00740000117161	ENSGT00940000160211 #9	ENSGT00940000162331 #10	ENSGT00940000157672 #11	ENSGT00940000160052 #12	ENSGT00940000161047 #13	ENSGT00940000157041.a #15	ENSGT00530000063853.a.b #16	ENSGT00510000047791 #17	ENSGT00510000047030 #18	ENSGT00390000006585 #19	ENSGT00390000003044 #20	ENSGT00390000018598 #21	ENSGT00940000158257 #22	ENSGT00940000156501 #23	ENSGT00390000011138 #24	ENSGT00940000153866.B #25	ENSGT00950000183211.a.a.b #26	ENSGT00390000004877 #27	ENSGT00940000161003.b #28	ENSGT00940000156672 #29	ENSGT00940000153717.b #30	ENSGT00940000154258.b #31	ENSGT00390000002200.a.a #32	ENSGT00940000159716 #33	ENSGT00940000159191 #34	ENSGT00940000153875.d.b #35	ENSGT00530000063884.b #36	ENSGT00390000007606 #37
Rambouillet Sheep	MODERN SPECIES	5	DUS2 (ENSOARG00020007189)	DDX28 (ENSOARG00020007159)	DPEP2NB (ENSOARG00020007131)	DPEP2 (ENSOARG00020007092) #9	DPEP3 (ENSOARG00020006900) #10	SLC12A4 (ENSOARG00020004538) #11	LCAT (ENSOARG00020004421) #12	PSMB10 (ENSOARG00020004407) #13	PSKH1 (ENSOARG00020004339) #15	NRN1L (ENSOARG00020004296) #16	EDC4 (ENSOARG00020004110) #17	NUTF2 (ENSOARG00020004080) #18	THAP11 (ENSOARG00020004065) #19	CENPT (ENSOARG00020004004) #20	TSNAXIP1 (ENSOARG00020003891) #21	RANBP10 (ENSOARG00020003514) #22	GFOD2 (ENSOARG00020003457) #23	C16orf86 (ENSOARG00020003432) #24	ENKD1 (ENSOARG00020003379) #25	PARD6A (ENSOARG00020003347) #26	ACD (ENSOARG00020003196) #27	CARMIL2 (ENSOARG00020022572) #28	CTCF (ENSOARG00020022476) #29	RIPOR1 (ENSOARG00020022218) #30	AGRP (ENSOARG00020022169) #31	ATP6V0D1 (ENSOARG00020022126) #32	HSD11B2 (ENSOARG00020022068) #33	ZDHHC1 (ENSOARG00020021964) #34	TPPP3 (ENSOARG00020021942) #35	LRRC36 (ENSOARG00020021598) #36	KCTD19 (ENSOARG00020021493) #37
Goat	MODERN SPECIES	9	NFATC3 (ENSCHIG00000022703)	DUS2 (ENSCHIG00000023088)	DDX28 (ENSCHIG00000009658)	DPEP2 (ENSCHIG00000019954) #9	DPEP3 (ENSCHIG00000025807) #10	SLC12A4 (ENSCHIG00000026119) #11	LCAT (ENSCHIG00000014005) #12	PSMB10 (ENSCHIG00000023396) #13	PSKH1 (ENSCHIG00000022690) #15	NRN1L (ENSCHIG00000013945) #16	EDC4 (ENSCHIG00000017119) #17	ENSCHIG00000024970 #18	THAP11 (ENSCHIG00000011549) #19	CENPT (ENSCHIG00000026636) #20	TSNAXIP1 (ENSCHIG00000014033) #21	RANBP10 (ENSCHIG00000020152) #22	GFOD2 (ENSCHIG00000008683) #23	C16orf86 (ENSCHIG00000013815) #24	ENKD1 (ENSCHIG00000018459) #25	PARD6A (ENSCHIG00000007909) #26	ACD (ENSCHIG00000025516) #27	CARMIL2 (ENSCHIG00000022615) #28	CTCF (ENSCHIG00000013690) #29	RIPOR1 (ENSCHIG00000008773) #30	AGRP (ENSCHIG00000025951) #31	ATP6V0D1 (ENSCHIG00000017558) #32	HSD11B2 (ENSCHIG00000004358) #33	ZDHHC1 (ENSCHIG00000009629) #34	TPPP3 (ENSCHIG00000021248) #35	LRRC36 (ENSCHIG00000011267) #36	KCTD19 (ENSCHIG00000018050) #37
Bovinae	ANCESTRAL SPECIES	3	ENSGT00550000075019	ENSGT00940000161738	ENSGT00940000160211 #9	ENSGT00940000162331 #10	ENSGT00940000157672 #11	ENSGT00940000160052 #12	ENSGT00940000161047 #13	ENSGT00940000154494.b #14	ENSGT00940000157041.a #15	ENSGT00530000063853.a.b #16	ENSGT00510000047791 #17	ENSGT00510000047030 #18	ENSGT00390000006585 #19	ENSGT00390000003044 #20	ENSGT00390000018598 #21	ENSGT00940000158257 #22	ENSGT00940000156501 #23	ENSGT00390000011138 #24	ENSGT00940000153866.B #25	ENSGT00950000183211.a.a.b #26	ENSGT00390000004877 #27	ENSGT00940000161003.a #28	ENSGT00940000156672 #29	ENSGT00940000153717.b #30	ENSGT00940000154258.b #31	ENSGT00390000002200.a.a #32	ENSGT00940000159716 #33	ENSGT00940000159191 #34	ENSGT00940000153875.d.b #35	ENSGT00530000063884.b #36	ENSGT00390000007606 #37
Bos	ANCESTRAL SPECIES	4	ENSGT00550000075019	ENSGT00940000161738	ENSGT00940000160211 #9	ENSGT00940000162331 #10	ENSGT00940000157672 #11	ENSGT00940000160052 #12	ENSGT00940000161047 #13	ENSGT00940000154494.b #14	ENSGT00940000157041.a #15	ENSGT00530000063853.a.b #16	ENSGT00510000047791 #17	ENSGT00510000047030 #18	ENSGT00390000006585 #19	ENSGT00390000003044 #20	ENSGT00390000018598 #21	ENSGT00940000158257 #22	ENSGT00940000156501 #23	ENSGT00390000011138 #24	ENSGT00940000153866.B #25	ENSGT00950000183211.a.a.b #26	ENSGT00390000004877 #27	ENSGT00940000161003.a #28	ENSGT00940000161003.b #28	ENSGT00940000156672 #29	ENSGT00940000153717.b #30	ENSGT00940000154258.b #31	ENSGT00390000002200.a.a #32	ENSGT00940000159716 #33	ENSGT00940000159191 #34	ENSGT00940000153875.d.b #35	ENSGT00530000063884.b #36
Bos_a	ANCESTRAL SPECIES	1	ENSGT00550000075019	ENSGT00940000161738	ENSGT00940000160211 #9	ENSGT00940000162331 #10	ENSGT00940000157672 #11	ENSGT00940000160052 #12	ENSGT00940000161047 #13	ENSGT00940000154494.b #14	ENSGT00940000157041.a #15	ENSGT00530000063853.a.b #16	ENSGT00510000047791 #17	ENSGT00510000047030 #18	ENSGT00390000006585 #19	ENSGT00390000003044 #20	ENSGT00390000018598 #21	ENSGT00940000158257 #22	ENSGT00940000156501 #23	ENSGT00390000011138 #24	ENSGT00940000153866.B #25	ENSGT00950000183211.a.a.b #26	ENSGT00390000004877 #27	ENSGT00940000161003.b #28	ENSGT00940000161003.a #28	ENSGT00940000156672 #29	ENSGT00940000153717.b #30	ENSGT00940000154258.b #31	ENSGT00390000002200.a.a #32	ENSGT00940000159716 #33	ENSGT00940000159191 #34	ENSGT00940000153875.d.b #35	ENSGT00530000063884.b #36
Wild yak	MODERN SPECIES	818	DUS2 (ENSBMUG00000002737)	DDX28 (ENSBMUG00000002754)	DPEP2 (ENSBMUG00000002797) #9	DPEP3 (ENSBMUG00000002813) #10	SLC12A4 (ENSBMUG00000002897) #11	LCAT (ENSBMUG00000002927) #12	PSMB10 (ENSBMUG00000002931) #13	CTRL (ENSBMUG00000002946) #14	PSKH1 (ENSBMUG00000002959) #15	ENSBMUG00000002982 #16	EDC4 (ENSBMUG00000003019) #17	NUTF2 (ENSBMUG00000003042) #18	THAP11 (ENSBMUG00000003057) #19	CENPT (ENSBMUG00000003116) #20	TSNAXIP1 (ENSBMUG00000003195) #21	RANBP10 (ENSBMUG00000003315) #22	GFOD2 (ENSBMUG00000003362) #23	C16orf86 (ENSBMUG00000003370) #24	ENKD1 (ENSBMUG00000003405) #25	PARD6A (ENSBMUG00000003421) #26	ACD (ENSBMUG00000003453) #27	ENSBMUG00000003501 #28	CTCF (ENSBMUG00000003531) #29	RIPOR1 (ENSBMUG00000003626) #30	AGRP (ENSBMUG00000003672) #31	ATP6V0D1 (ENSBMUG00000003696) #32	HSD11B2 (ENSBMUG00000003730) #33	ZDHHC1 (ENSBMUG00000003794) #34	TPPP3 (ENSBMUG00000003823) #35	LRRC36 (ENSBMUG00000003891) #36	ENSBMUG00000003916
Domestic yak	MODERN SPECIES	12	PLA2G15 (ENSBGRG00000016967)	NFATC3 (ENSBGRG00000018263)	DUS2 (ENSBGRG00000019213)	DDX28 (ENSBGRG00000019797)	DPEP2 (ENSBGRG00000019915) #9	DPEP3 (ENSBGRG00000020239) #10	SLC12A4 (ENSBGRG00000021263) #11	PSMB10 (ENSBGRG00000023431) #13	PSKH1 (ENSBGRG00000023536) #15	NRN1L (ENSBGRG00000023598) #16	EDC4 (ENSBGRG00000023777) #17	NUTF2 (ENSBGRG00000024283) #18	THAP11 (ENSBGRG00000024438) #19	CENPT (ENSBGRG00000024633) #20	TSNAXIP1 (ENSBGRG00000024921) #21	RANBP10 (ENSBGRG00000025317) #22	GFOD2 (ENSBGRG00000025507) #23	C16orf86 (ENSBGRG00000025596) #24	ENKD1 (ENSBGRG00000025695) #25	PARD6A (ENSBGRG00000025795) #26	ACD (ENSBGRG00000025908) #27	ENSBGRG00000026198 #28	CTCF (ENSBGRG00000026349) #29	AGRP (ENSBGRG00000026735) #31	ATP6V0D1 (ENSBGRG00000026746) #32	HSD11B2 (ENSBGRG00000026764) #33	ZDHHC1 (ENSBGRG00000026787) #34	TPPP3 (ENSBGRG00000026802) #35	LRRC36 (ENSBGRG00000026835) #36	ENSBGRG00000026851	KCTD19 (ENSBGRG00000026853) #37
Bos_b	ANCESTRAL SPECIES		ENSGT00940000156131.a.b	ENSGT00550000075019	ENSGT00940000161738	ENSGT00940000160211 #9	ENSGT00940000162331 #10	ENSGT00940000157672 #11	ENSGT00940000160052 #12	ENSGT00940000161047 #13	ENSGT00940000157041.a #15	ENSGT00530000063853.a.b #16	ENSGT00510000047791 #17	ENSGT00510000047030 #18	ENSGT00390000006585 #19	ENSGT00390000003044 #20	ENSGT00390000018598 #21	ENSGT00940000158257 #22	ENSGT00940000156501 #23	ENSGT00390000011138 #24	ENSGT00940000153866.B #25	ENSGT00950000183211.a.a.b #26	ENSGT00390000004877 #27	ENSGT00940000161003.a #28	ENSGT00940000156672 #29	ENSGT00940000153717.b #30	ENSGT00940000154258.b #31	ENSGT00390000002200.a.a #32	ENSGT00940000159716 #33	ENSGT00940000159191 #34	ENSGT00940000153875.d.b #35	ENSGT00530000063884.b #36	ENSGT00940000156218.b
Hybrid Bos Indicus	MODERN SPECIES	9	ESRP2 (ENSBIXG00005024266)	NFATC3 (ENSBIXG00005024219)	DUS2 (ENSBIXG00005024133)	DDX28 (ENSBIXG00005024055)	DPEP2 (ENSBIXG00005024041) #9	DPEP3 (ENSBIXG00005004111) #10	SLC12A4 (ENSBIXG00005023907) #11	PSMB10 (ENSBIXG00005023115) #13	PSKH1 (ENSBIXG00005006519) #15	NRN1L (ENSBIXG00005023086) #16	EDC4 (ENSBIXG00005023065) #17	ENSBIXG00005022976 #18	THAP11 (ENSBIXG00005022909) #19	CENPT (ENSBIXG00005022894) #20	TSNAXIP1 (ENSBIXG00005022839) #21	RANBP10 (ENSBIXG00005022731) #22	GFOD2 (ENSBIXG00005022694) #23	C16orf86 (ENSBIXG00005006934) #24	ENKD1 (ENSBIXG00005022641) #25	PARD6A (ENSBIXG00005022614) #26	ACD (ENSBIXG00005022590) #27	ENSBIXG00005022410 #28	CTCF (ENSBIXG00005022258) #29	RIPOR1 (ENSBIXG00005022104) #30	AGRP (ENSBIXG00005021957) #31	ATP6V0D1 (ENSBIXG00005003697) #32	HSD11B2 (ENSBIXG00005021881) #33	ZDHHC1 (ENSBIXG00005021870) #34	TPPP3 (ENSBIXG00005021813) #35	LRRC36 (ENSBIXG00005021780) #36	ENSBIXG00005003649
Cow	MODERN SPECIES	9	NFATC3 (ENSBTAG00000004368)	DUS2 (ENSBTAG00000014644)	DDX28 (ENSBTAG00000004290)	DPEP2 (ENSBTAG00000039426) #9	DPEP3 (ENSBTAG00000002824) #10	SLC12A4 (ENSBTAG00000018045) #11	LCAT (ENSBTAG00000018043) #12	PSMB10 (ENSBTAG00000018040) #13	PSKH1 (ENSBTAG00000018037) #15	NRN1L (ENSBTAG00000053192) #16	EDC4 (ENSBTAG00000006417) #17	NUTF2 (ENSBTAG00000006414) #18	THAP11 (ENSBTAG00000006411) #19	CENPT (ENSBTAG00000006404) #20	TSNAXIP1 (ENSBTAG00000006387) #21	RANBP10 (ENSBTAG00000032763) #22	GFOD2 (ENSBTAG00000018908) #23	C18H16orf86 (ENSBTAG00000018906) #24	ENKD1 (ENSBTAG00000018904) #25	PARD6A (ENSBTAG00000023734) #26	ACD (ENSBTAG00000018903) #27	CARMIL2 (ENSBTAG00000018900) #28	CTCF (ENSBTAG00000013757) #29	RIPOR1 (ENSBTAG00000008860) #30	AGRP (ENSBTAG00000014556) #31	ATP6V0D1 (ENSBTAG00000014553) #32	HSD11B2 (ENSBTAG00000005685) #33	ZDHHC1 (ENSBTAG00000038134) #34	TPPP3 (ENSBTAG00000019822) #35	ENSBTAG00000046690	LRRC36 (ENSBTAG00000001838) #36
American bison	MODERN SPECIES	3211	NFATC3 (ENSBBBG00000002581)	DUS2 (ENSBBBG00000015886)	DDX28 (ENSBBBG00000015814)	DPEP2 (ENSBBBG00000015799) #9	DPEP3 (ENSBBBG00000015763) #10	SLC12A4 (ENSBBBG00000015687) #11	LCAT (ENSBBBG00000008292) #12	PSMB10 (ENSBBBG00000008328) #13	PSKH1 (ENSBBBG00000008159) #15	NRN1L (ENSBBBG00000015431) #16	EDC4 (ENSBBBG00000015422) #17	NUTF2 (ENSBBBG00000015404) #18	THAP11 (ENSBBBG00000015389) #19	CENPT (ENSBBBG00000015380) #20	TSNAXIP1 (ENSBBBG00000003811) #21	RANBP10 (ENSBBBG00000001250) #22	GFOD2 (ENSBBBG00000001359) #23	C16orf86 (ENSBBBG00000001366) #24	ENKD1 (ENSBBBG00000001375) #25	PARD6A (ENSBBBG00000001384) #26	ACD (ENSBBBG00000001398) #27	ENSBBBG00000015281 #28	CTCF (ENSBBBG00000015242) #29	RIPOR1 (ENSBBBG00000003538) #30	AGRP (ENSBBBG00000008118) #31	ATP6V0D1 (ENSBBBG00000015106) #32	HSD11B2 (ENSBBBG00000003742) #33	ZDHHC1 (ENSBBBG00000015085) #34	TPPP3 (ENSBBBG00000015070) #35	LRRC36 (ENSBBBG00000003737) #36	ENSBBBG00000014995
Siberian musk deer	MODERN SPECIES	125	NFATC3 (ENSMMSG00000000237)	DUS2 (ENSMMSG00000000317)	DDX28 (ENSMMSG00000000393)	DPEP2 (ENSMMSG00000000405) #9	DPEP3 (ENSMMSG00000000492) #10	SLC12A4 (ENSMMSG00000000773) #11	LCAT (ENSMMSG00000000964) #12	PSMB10 (ENSMMSG00000000993) #13	PSKH1 (ENSMMSG00000001064) #15	NRN1L (ENSMMSG00000001081) #16	EDC4 (ENSMMSG00000001104) #17	NUTF2 (ENSMMSG00000001172) #18	THAP11 (ENSMMSG00000001186) #19	CENPT (ENSMMSG00000001212) #20	TSNAXIP1 (ENSMMSG00000001318) #21	RANBP10 (ENSMMSG00000001366) #22	GFOD2 (ENSMMSG00000001391) #23	C16orf86 (ENSMMSG00000001406) #24	ENKD1 (ENSMMSG00000001420) #25	PARD6A (ENSMMSG00000001445) #26	ACD (ENSMMSG00000001471) #27	CARMIL2 (ENSMMSG00000001532) #28	CTCF (ENSMMSG00000001596) #29	RIPOR1 (ENSMMSG00000001629) #30	AGRP (ENSMMSG00000001658) #31	ATP6V0D1 (ENSMMSG00000001667) #32	HSD11B2 (ENSMMSG00000001687) #33	ZDHHC1 (ENSMMSG00000001705) #34	TPPP3 (ENSMMSG00000001723) #35	LRRC36 (ENSMMSG00000001751) #36	KCTD19 (ENSMMSG00000001864) #37
Yarkand deer	MODERN SPECIES	27	DUS2 (ENSCHYG00000016831)	DDX28 (ENSCHYG00000016790)	DPEP2 (ENSCHYG00000016637) #9	DPEP3 (ENSCHYG00000016357) #10	SLC12A4 (ENSCHYG00000013256) #11	LCAT (ENSCHYG00000012936) #12	PSMB10 (ENSCHYG00000012898) #13	CTRL (ENSCHYG00000012817) #14	PSKH1 (ENSCHYG00000012774) #15	NRN1L (ENSCHYG00000012707) #16	EDC4 (ENSCHYG00000012403) #17	ENSCHYG00000012351 #18	THAP11 (ENSCHYG00000012312) #19	CENPT (ENSCHYG00000012140) #20	TSNAXIP1 (ENSCHYG00000012035) #21	RANBP10 (ENSCHYG00000011919) #22	GFOD2 (ENSCHYG00000011868) #23	C16orf86 (ENSCHYG00000011831) #24	ENKD1 (ENSCHYG00000011718) #25	PARD6A (ENSCHYG00000011646) #26	ACD (ENSCHYG00000011430) #27	CARMIL2 (ENSCHYG00000010924) #28	CTCF (ENSCHYG00000010799) #29	RIPOR1 (ENSCHYG00000010451) #30	AGRP (ENSCHYG00000010393) #31	ATP6V0D1 (ENSCHYG00000010102) #32	HSD11B2 (ENSCHYG00000009995) #33	ZDHHC1 (ENSCHYG00000009775) #34	TPPP3 (ENSCHYG00000009692) #35	ENSCHYG00000009661	LRRC36 (ENSCHYG00000009424) #36
Cetacea	ANCESTRAL SPECIES	6	ENSGT00940000161738	ENSGT00740000117161.a	ENSGT00940000160211.e #9	ENSGT00940000162331 #10	ENSGT00940000157672 #11	ENSGT00940000160052 #12	ENSGT00940000161047 #13	ENSGT00940000154494.b #14	ENSGT00940000157041.a #15	ENSGT00530000063853.a.b #16	ENSGT00510000047791 #17	ENSGT00510000047030 #18	ENSGT00390000006585 #19	ENSGT00390000003044 #20	ENSGT00390000018598 #21	ENSGT00940000158257 #22	ENSGT00940000156501 #23	ENSGT00390000011138 #24	ENSGT00940000153866.B #25	ENSGT00950000183211.a.a.b #26	ENSGT00390000004877 #27	ENSGT00940000161003 #28	ENSGT00940000156672 #29	ENSGT00940000153717.b #30	ENSGT00940000154258.b #31	ENSGT00390000002200.a.a #32	ENSGT00940000159716 #33	ENSGT00940000159191 #34	ENSGT00940000153875.d.b #35	ENSGT00530000063884.b #36	ENSGT00390000007606 #37
Blue whale	MODERN SPECIES	10	ENSBMSG00010019846	ENSBMSG00010019833	ENSBMSG00010019811 #9	DPEP3 (ENSBMSG00010019770) #10	SLC12A4 (ENSBMSG00010019678) #11	LCAT (ENSBMSG00010019638) #12	PSMB10 (ENSBMSG00010019618) #13	CTRL (ENSBMSG00010019378) #14	PSKH1 (ENSBMSG00010019307) #15	NRN1L (ENSBMSG00010019292) #16	EDC4 (ENSBMSG00010019235) #17	ENSBMSG00010019203 #18	ENSBMSG00010019189 #19	CENPT (ENSBMSG00010019145) #20	TSNAXIP1 (ENSBMSG00010018897) #21	RANBP10 (ENSBMSG00010018705) #22	C16orf86 (ENSBMSG00010018664) #24	GFOD2 (ENSBMSG00010018608) #23	PARD6A (ENSBMSG00010018558) #26	ACD (ENSBMSG00010018463) #27	CARMIL2 (ENSBMSG00010018294) #28	CTCF (ENSBMSG00010018230) #29	RIPOR1 (ENSBMSG00010018027) #30	AGRP (ENSBMSG00010017977) #31	ATP6V0D1 (ENSBMSG00010017928) #32	HSD11B2 (ENSBMSG00010017905) #33	ZDHHC1 (ENSBMSG00010017851) #34	TPPP3 (ENSBMSG00010017825) #35	LRRC36 (ENSBMSG00010017738) #36	KCTD19 (ENSBMSG00010017657) #37	SLC9A5 (ENSBMSG00010017437)
Odontoceti	ANCESTRAL SPECIES	6	ENSGT00940000161738	ENSGT00740000117161.a	ENSGT00940000160211.e #9	ENSGT00940000162331 #10	ENSGT00940000157672 #11	ENSGT00940000160052 #12	ENSGT00940000161047 #13	ENSGT00940000154494.b #14	ENSGT00940000157041.a #15	ENSGT00530000063853.a.b #16	ENSGT00510000047791 #17	ENSGT00510000047030 #18	ENSGT00390000006585 #19	ENSGT00390000003044 #20	ENSGT00390000018598 #21	ENSGT00940000158257 #22	ENSGT00940000156501 #23	ENSGT00390000011138 #24	ENSGT00940000153866.B #25	ENSGT00950000183211.a.a.b #26	ENSGT00390000004877 #27	ENSGT00940000161003 #28	ENSGT00940000156672 #29	ENSGT00940000153717.b #30	ENSGT00940000154258.b #31	ENSGT00390000002200.a.a #32	ENSGT00940000159716 #33	ENSGT00940000159191 #34	ENSGT00940000153875.d.b #35	ENSGT00530000063884.b #36	ENSGT00390000007606 #37
Odontoceti_a	ANCESTRAL SPECIES	7	ENSGT00740000117161.a	ENSGT00940000160211.f #9	ENSGT00940000160211.e #9	ENSGT00940000162331 #10	ENSGT00940000157672 #11	ENSGT00940000160052 #12	ENSGT00940000161047 #13	ENSGT00940000154494.b #14	ENSGT00940000157041.a #15	ENSGT00530000063853.a.b #16	ENSGT00510000047791 #17	ENSGT00510000047030 #18	ENSGT00390000006585 #19	ENSGT00390000003044 #20	ENSGT00390000018598 #21	ENSGT00940000158257 #22	ENSGT00940000156501 #23	ENSGT00390000011138 #24	ENSGT00940000153866.B #25	ENSGT00950000183211.a.a.b #26	ENSGT00390000004877 #27	ENSGT00940000161003 #28	ENSGT00940000156672 #29	ENSGT00940000153717.b #30	ENSGT00940000154258.b #31	ENSGT00390000002200.a.a #32	ENSGT00940000159716 #33	ENSGT00940000159191 #34	ENSGT00940000153875.d.b #35	ENSGT00530000063884.b #36	ENSGT00390000007606 #37
Dolphin	MODERN SPECIES	696						SLC12A4 (ENSTTRG00000009258) #11	LCAT (ENSTTRG00000009257) #12	PSMB10 (ENSTTRG00000009256) #13	CTRL (ENSTTRG00000009255) #14	PSKH1 (ENSTTRG00000009254) #15	NRN1L (ENSTTRG00000009253) #16	EDC4 (ENSTTRG00000009252) #17	NUTF2 (ENSTTRG00000009251) #18	CENPT (ENSTTRG00000009249) #20	TSNAXIP1 (ENSTTRG00000009248) #21	RANBP10 (ENSTTRG00000009247) #22
Odontoceti_b	ANCESTRAL SPECIES	5	ENSGT00940000161738	ENSGT00740000117161.a	ENSGT00940000160211.f #9	ENSGT00940000162331 #10	ENSGT00940000157672 #11	ENSGT00940000160052 #12	ENSGT00940000161047 #13	ENSGT00940000154494.b #14	ENSGT00940000157041.a #15	ENSGT00530000063853.a.b #16	ENSGT00510000047791 #17	ENSGT00510000047030 #18	ENSGT00390000006585 #19	ENSGT00390000003044 #20	ENSGT00990000212499	ENSGT00940000158257 #22	ENSGT00940000156501 #23	ENSGT00390000011138 #24	ENSGT00940000153866.B #25	ENSGT00950000183211.a.a.b #26	ENSGT00390000004877 #27	ENSGT00940000161003 #28	ENSGT00940000156672 #29	ENSGT00940000153717.b #30	ENSGT00940000154258.b #31	ENSGT00390000002200.a.a #32	ENSGT00940000159716 #33	ENSGT00940000159191 #34	ENSGT00940000153875.d.b #35	ENSGT00530000063884.b #36	ENSGT00390000007606 #37
Vaquita	MODERN SPECIES	10	DDX28 (ENSPSNG00000021483)	ENSPSNG00000021462	DPEP3 (ENSPSNG00000021424) #10	SLC12A4 (ENSPSNG00000021302) #11	LCAT (ENSPSNG00000021256) #12	PSMB10 (ENSPSNG00000021236) #13	CTRL (ENSPSNG00000021216) #14	ENSPSNG00000021193	PSKH1 (ENSPSNG00000021179) #15	NRN1L (ENSPSNG00000021156) #16	EDC4 (ENSPSNG00000021129) #17	ENSPSNG00000021082 #18	THAP11 (ENSPSNG00000021074) #19	CENPT (ENSPSNG00000021028) #20	ENSPSNG00000020986	RANBP10 (ENSPSNG00000020914) #22	ENSPSNG00000020836 #23	C16orf86 (ENSPSNG00000020782) #24	ENKD1 (ENSPSNG00000020745) #25	PARD6A (ENSPSNG00000020678) #26	ACD (ENSPSNG00000020566) #27	CARMIL2 (ENSPSNG00000020231) #28	CTCF (ENSPSNG00000020142) #29	RIPOR1 (ENSPSNG00000019920) #30	AGRP (ENSPSNG00000019863) #31	ATP6V0D1 (ENSPSNG00000019804) #32	HSD11B2 (ENSPSNG00000019771) #33	ZDHHC1 (ENSPSNG00000019669) #34	ENSPSNG00000019623 #35	LRRC36 (ENSPSNG00000019384) #36	KCTD19 (ENSPSNG00000019323) #37
Monodontidae	ANCESTRAL SPECIES	3	ENSGT00940000161738	ENSGT00740000117161.a	ENSGT00940000160211.f #9	ENSGT00940000162331 #10	ENSGT00940000157672 #11	ENSGT00940000160052 #12	ENSGT00940000161047 #13	ENSGT00940000154494.b #14	ENSGT00940000157041.a #15	ENSGT00530000063853.a.b #16	ENSGT00510000047791 #17	ENSGT00510000047030 #18	ENSGT00390000006585 #19	ENSGT00390000003044 #20	ENSGT00990000212499	ENSGT00940000158257 #22	ENSGT00940000156501 #23	ENSGT00390000011138 #24	ENSGT00940000153866.B #25	ENSGT00950000183211.a.a.b #26	ENSGT00390000004877 #27	ENSGT00940000161003 #28	ENSGT00940000156672 #29	ENSGT00940000153717.b #30	ENSGT00940000154258.b #31	ENSGT00390000002200.a.a #32	ENSGT00940000159716 #33	ENSGT00940000159191 #34	ENSGT00940000153875.d.b #35	ENSGT00530000063884.b #36	ENSGT00390000007606 #37
Narwhal	MODERN SPECIES	296	DDX28 (ENSMMNG00015001154)	ENSMMNG00015001169	DPEP3 (ENSMMNG00015001187) #10	SLC12A4 (ENSMMNG00015001317) #11	LCAT (ENSMMNG00015001543) #12	PSMB10 (ENSMMNG00015001572) #13	CTRL (ENSMMNG00015001624) #14	PSKH1 (ENSMMNG00015001661) #15	ENSMMNG00015001676	NRN1L (ENSMMNG00015001682) #16	EDC4 (ENSMMNG00015001706) #17	ENSMMNG00015001755 #18	THAP11 (ENSMMNG00015001773) #19	CENPT (ENSMMNG00015001791) #20	ENSMMNG00015001835	RANBP10 (ENSMMNG00015001877) #22	GFOD2 (ENSMMNG00015001915) #23	C16orf86 (ENSMMNG00015001937) #24	ENKD1 (ENSMMNG00015001956) #25	PARD6A (ENSMMNG00015001987) #26	ACD (ENSMMNG00015002036) #27	CARMIL2 (ENSMMNG00015002127) #28	CTCF (ENSMMNG00015002162) #29	RIPOR1 (ENSMMNG00015002214) #30	AGRP (ENSMMNG00015002325) #31	ATP6V0D1 (ENSMMNG00015002352) #32	HSD11B2 (ENSMMNG00015002384) #33	ZDHHC1 (ENSMMNG00015002416) #34	TPPP3 (ENSMMNG00015002443) #35	LRRC36 (ENSMMNG00015002487) #36	KCTD19 (ENSMMNG00015002571) #37
Beluga whale	MODERN SPECIES	12	DDX28 (ENSDLEG00000002943)	ENSDLEG00000002948 #9	DPEP3 (ENSDLEG00000002961) #10	SLC12A4 (ENSDLEG00000002978) #11	LCAT (ENSDLEG00000002994) #12	PSMB10 (ENSDLEG00000003004) #13	CTRL (ENSDLEG00000003029) #14	PSKH1 (ENSDLEG00000003047) #15	ENSDLEG00000003054	NRN1L (ENSDLEG00000003059) #16	EDC4 (ENSDLEG00000003086) #17	NUTF2 (ENSDLEG00000003146) #18	THAP11 (ENSDLEG00000003161) #19	CENPT (ENSDLEG00000003179) #20	ENSDLEG00000003263	RANBP10 (ENSDLEG00000003278) #22	GFOD2 (ENSDLEG00000003293) #23	C16orf86 (ENSDLEG00000003300) #24	ENKD1 (ENSDLEG00000003309) #25	PARD6A (ENSDLEG00000003329) #26	ACD (ENSDLEG00000003344) #27	CARMIL2 (ENSDLEG00000000332) #28	CTCF (ENSDLEG00000000942) #29	RIPOR1 (ENSDLEG00000000973) #30	AGRP (ENSDLEG00000001071) #31	ATP6V0D1 (ENSDLEG00000001081) #32	HSD11B2 (ENSDLEG00000001092) #33	ZDHHC1 (ENSDLEG00000001103) #34	TPPP3 (ENSDLEG00000001125) #35	LRRC36 (ENSDLEG00000001147) #36	KCTD19 (ENSDLEG00000001198) #37
Sperm whale	DUPLICATION
Sperm whale	MODERN SPECIES	8	ENSPCTG00005010821	ENSPCTG00005010875	B3GNT9 (ENSPCTG00005010910)	ENSPCTG00005010925	SLC9A5 (ENSPCTG00005011041)	PLEKHG4 (ENSPCTG00005011102)	KCTD19 (ENSPCTG00005011295) #37	LRRC36 (ENSPCTG00005011328) #36	TPPP3 (ENSPCTG00005011684) #35	ZDHHC1 (ENSPCTG00005011727) #34	HSD11B2 (ENSPCTG00005011763) #33	ATP6V0D1 (ENSPCTG00005011834) #32	AGRP (ENSPCTG00005011933) #31	RIPOR1 (ENSPCTG00005011991) #30	CTCF (ENSPCTG00005012353) #29	ENSPCTG00005012429 #22	CENPT (ENSPCTG00005012556) #20	TSNAXIP1 (ENSPCTG00005012812) #21	PSKH1 (ENSPCTG00005013295) #15	CTRL (ENSPCTG00005013354) #14	PSMB10 (ENSPCTG00005013998) #13	LCAT (ENSPCTG00005014131) #12	SLC12A4 (ENSPCTG00005014235) #11	DPEP3 (ENSPCTG00005014876) #10	ENSPCTG00005015022 #9	DPEP2NB (ENSPCTG00005015231)	DDX28 (ENSPCTG00005015299)	DUS2 (ENSPCTG00005015335)	NFATC3 (ENSPCTG00005015448)	PLA2G15 (ENSPCTG00005015766)	SLC7A6 (ENSPCTG00005015905)
Sperm whale	MODERN SPECIES	578																ENSPCTG00005019523 #22
Laurasiatheria_b	ANCESTRAL SPECIES	5	ENSGT00940000161738	ENSGT00740000117161	ENSGT00940000160211 #9	ENSGT00940000162331 #10	ENSGT00940000157672 #11	ENSGT00940000160052 #12	ENSGT00940000161047 #13	ENSGT00940000154494.b #14	ENSGT00940000157041.a #15	ENSGT00530000063853.a.b #16	ENSGT00510000047791 #17	ENSGT00510000047030 #18	ENSGT00390000006585 #19	ENSGT00390000003044 #20	ENSGT00390000018598 #21	ENSGT00940000158257 #22	ENSGT00940000156501 #23	ENSGT00390000011138 #24	ENSGT00940000153866.B #25	ENSGT00950000183211.a.a.b #26	ENSGT00390000004877 #27	ENSGT00940000161003 #28	ENSGT00940000156672 #29	ENSGT00940000153717.b #30	ENSGT00940000154258.b #31	ENSGT00390000002200.a.a #32	ENSGT00940000159716 #33	ENSGT00940000159191 #34	ENSGT00940000153875.d.b #35	ENSGT00530000063884.b #36	ENSGT00390000007606 #37
Carnivora	ANCESTRAL SPECIES	2	ENSGT00940000161738	ENSGT00740000117161	ENSGT00940000160211 #9	ENSGT00940000162331 #10	ENSGT00940000157672 #11	ENSGT00940000160052 #12	ENSGT00940000161047 #13	ENSGT00940000154494.b #14	ENSGT00940000157041.a #15	ENSGT00530000063853.a.b #16	ENSGT00510000047791 #17	ENSGT00510000047030 #18	ENSGT00390000006585 #19	ENSGT00390000003044 #20	ENSGT00390000018598 #21	ENSGT00940000158257 #22	ENSGT00940000156501 #23	ENSGT00390000011138 #24	ENSGT00940000153866.B #25	ENSGT00950000183211.a.a.b #26	ENSGT00390000004877 #27	ENSGT00940000161003 #28	ENSGT00940000156672 #29	ENSGT00940000153717.b #30	ENSGT00940000154258.b #31	ENSGT00390000002200.a.a #32	ENSGT00940000159716 #33	ENSGT00940000159191 #34	ENSGT00940000153875.d.b #35	ENSGT00530000063884.b #36	ENSGT00390000007606 #37
Felidae	ANCESTRAL SPECIES	7	ENSGT00940000161738	ENSGT00740000117161	ENSGT00940000160211 #9	ENSGT00940000162331 #10	ENSGT00940000157672 #11	ENSGT00940000160052 #12	ENSGT00940000161047 #13	ENSGT00940000154494.b #14	ENSGT00940000157041.a #15	ENSGT00530000063853.a.b #16	ENSGT00510000047791 #17	ENSGT00510000047030 #18	ENSGT00390000006585 #19	ENSGT00390000003044 #20	ENSGT00390000018598 #21	ENSGT00940000158257 #22	ENSGT00940000156501 #23	ENSGT00390000011138 #24	ENSGT00940000153866.B #25	ENSGT00950000183211.a.a.b #26	ENSGT00390000004877 #27	ENSGT00940000161003 #28	ENSGT00940000156672 #29	ENSGT00940000153717.b #30	ENSGT00940000154258.b #31	ENSGT00390000002200.a.a #32	ENSGT00940000159716 #33	ENSGT00940000159191 #34	ENSGT00940000153875.d.b #35	ENSGT00530000063884.b #36	ENSGT00390000007606 #37
Cat	MODERN SPECIES	246	DUS2 (ENSFCAG00000010417)	DDX28 (ENSFCAG00000012858)	DPEP2NB (ENSFCAG00000041454)	DPEP2 (ENSFCAG00000012856) #9	DPEP3 (ENSFCAG00000050171) #10	SLC12A4 (ENSFCAG00000012855) #11	PSMB10 (ENSFCAG00000012854) #13	CTRL (ENSFCAG00000012853) #14	PSKH1 (ENSFCAG00000028406) #15	NRN1L (ENSFCAG00000031474) #16	EDC4 (ENSFCAG00000012851) #17	NUTF2 (ENSFCAG00000008167) #18	THAP11 (ENSFCAG00000012850) #19	CENPT (ENSFCAG00000012849) #20	TSNAXIP1 (ENSFCAG00000012848) #21	RANBP10 (ENSFCAG00000003494) #22	GFOD2 (ENSFCAG00000003493) #23	C16orf86 (ENSFCAG00000026033) #24	ENKD1 (ENSFCAG00000009282) #25	PARD6A (ENSFCAG00000009281) #26	ACD (ENSFCAG00000009280) #27	CARMIL2 (ENSFCAG00000009279) #28	CTCF (ENSFCAG00000003492) #29	RIPOR1 (ENSFCAG00000009278) #30	AGRP (ENSFCAG00000037497) #31	ATP6V0D1 (ENSFCAG00000003433) #32	HSD11B2 (ENSFCAG00000027537) #33	ZDHHC1 (ENSFCAG00000018593) #34	TPPP3 (ENSFCAG00000009277) #35	LRRC36 (ENSFCAG00000009276) #36	KCTD19 (ENSFCAG00000009275) #37
Panthera	ANCESTRAL SPECIES	10	ENSGT00940000161738	ENSGT00740000117161	ENSGT00940000160211 #9	ENSGT00940000162331 #10	ENSGT00940000157672 #11	ENSGT00940000160052 #12	ENSGT00940000161047 #13	ENSGT00940000154494.b #14	ENSGT00940000157041.a #15	ENSGT00530000063853.a.b #16	ENSGT00510000047791 #17	ENSGT00510000047030 #18	ENSGT00390000006585 #19	ENSGT00390000003044 #20	ENSGT00390000018598 #21	ENSGT00940000158257 #22	ENSGT00940000156501 #23	ENSGT00390000011138 #24	ENSGT00940000153866.B #25	ENSGT00950000183211.a.a.b #26	ENSGT00390000004877 #27	ENSGT00940000161003 #28	ENSGT00940000156672 #29	ENSGT00940000153717.b #30	ENSGT00940000154258.b #31	ENSGT00390000002200.a.a #32	ENSGT00940000159716 #33	ENSGT00940000159191 #34	ENSGT00940000153875.d.b #35	ENSGT00530000063884.b #36	ENSGT00390000007606 #37
Tiger	MODERN SPECIES	320	DDX28 (ENSPTIG00000006444)	DPEP2NB (ENSPTIG00000021102)	DPEP2 (ENSPTIG00000021091) #9	DPEP3 (ENSPTIG00000021073) #10	SLC12A4 (ENSPTIG00000020594) #11	LCAT (ENSPTIG00000020205) #12	PSMB10 (ENSPTIG00000020142) #13	CTRL (ENSPTIG00000020054) #14	PSKH1 (ENSPTIG00000019999) #15	NRN1L (ENSPTIG00000019977) #16	EDC4 (ENSPTIG00000019864) #17	NUTF2 (ENSPTIG00000019759) #18	THAP11 (ENSPTIG00000006408) #19	CENPT (ENSPTIG00000019288) #20	TSNAXIP1 (ENSPTIG00000019175) #21	RANBP10 (ENSPTIG00000018644) #22	GFOD2 (ENSPTIG00000018440) #23	C16orf86 (ENSPTIG00000018423) #24	ENKD1 (ENSPTIG00000018339) #25	PARD6A (ENSPTIG00000018149) #26	ACD (ENSPTIG00000017755) #27	CARMIL2 (ENSPTIG00000016035) #28	CTCF (ENSPTIG00000015459) #29	AGRP (ENSPTIG00000013563) #31	ATP6V0D1 (ENSPTIG00000013473) #32	HSD11B2 (ENSPTIG00000013334) #33	ZDHHC1 (ENSPTIG00000012632) #34	TPPP3 (ENSPTIG00000012322) #35	LRRC36 (ENSPTIG00000011930) #36	KCTD19 (ENSPTIG00000011820) #37	PLEKHG4 (ENSPTIG00000011316)
Panthera_a	ANCESTRAL SPECIES	8	ENSGT00940000161738	ENSGT00740000117161	ENSGT00940000160211 #9	ENSGT00940000162331 #10	ENSGT00940000157672 #11	ENSGT00940000160052 #12	ENSGT00940000161047 #13	ENSGT00940000154494.b #14	ENSGT00940000157041.a #15	ENSGT00530000063853.a.b #16	ENSGT00510000047791 #17	ENSGT00510000047030 #18	ENSGT00390000006585 #19	ENSGT00390000003044 #20	ENSGT00390000018598 #21	ENSGT00940000158257 #22	ENSGT00940000156501 #23	ENSGT00390000011138 #24	ENSGT00940000153866.B #25	ENSGT00950000183211.a.a.b #26	ENSGT00390000004877 #27	ENSGT00940000161003 #28	ENSGT00940000156672 #29	ENSGT00940000153717.b #30	ENSGT00940000154258.b #31	ENSGT00390000002200.a.a #32	ENSGT00940000159716 #33	ENSGT00940000159191 #34	ENSGT00940000153875.d.b #35	ENSGT00530000063884.b #36	ENSGT00390000007606 #37
lion	MODERN SPECIES	15	DDX28 (ENSPLOG00000019935)	DPEP2NB (ENSPLOG00000019914)	DPEP2 (ENSPLOG00000019838) #9	DPEP3 (ENSPLOG00000019750) #10	SLC12A4 (ENSPLOG00000019086) #11	LCAT (ENSPLOG00000018945) #12	PSMB10 (ENSPLOG00000018865) #13	CTRL (ENSPLOG00000018801) #14	PSKH1 (ENSPLOG00000018773) #15	NRN1L (ENSPLOG00000018743) #16	EDC4 (ENSPLOG00000018673) #17	NUTF2 (ENSPLOG00000018591) #18	THAP11 (ENSPLOG00000018567) #19	CENPT (ENSPLOG00000018347) #20	TSNAXIP1 (ENSPLOG00000018129) #21	RANBP10 (ENSPLOG00000018062) #22	GFOD2 (ENSPLOG00000018017) #23	C16orf86 (ENSPLOG00000017968) #24	ENKD1 (ENSPLOG00000017915) #25	PARD6A (ENSPLOG00000017853) #26	ACD (ENSPLOG00000017661) #27	CARMIL2 (ENSPLOG00000017518) #28	CTCF (ENSPLOG00000017439) #29	RIPOR1 (ENSPLOG00000017003) #30	AGRP (ENSPLOG00000016913) #31	ATP6V0D1 (ENSPLOG00000016862) #32	HSD11B2 (ENSPLOG00000016794) #33	ZDHHC1 (ENSPLOG00000016693) #34	TPPP3 (ENSPLOG00000016652) #35	LRRC36 (ENSPLOG00000016474) #36	KCTD19 (ENSPLOG00000016337) #37
leopard	MODERN SPECIES	28	DDX28 (ENSPPRG00000018322)	DPEP2NB (ENSPPRG00000003883)	DPEP2 (ENSPPRG00000003664) #9	DPEP3 (ENSPPRG00000002811) #10	SLC12A4 (ENSPPRG00000001746) #11	LCAT (ENSPPRG00000023473) #12	PSMB10 (ENSPPRG00000020434) #13	CTRL (ENSPPRG00000016828) #14	PSKH1 (ENSPPRG00000016168) #15	NRN1L (ENSPPRG00000015664) #16	EDC4 (ENSPPRG00000014871) #17	NUTF2 (ENSPPRG00000013687) #18	THAP11 (ENSPPRG00000018016) #19	CENPT (ENSPPRG00000012729) #20	TSNAXIP1 (ENSPPRG00000009148) #21	RANBP10 (ENSPPRG00000006407) #22	GFOD2 (ENSPPRG00000003130) #23	C16orf86 (ENSPPRG00000002647) #24	ENKD1 (ENSPPRG00000002415) #25	PARD6A (ENSPPRG00000002268) #26	ACD (ENSPPRG00000001789) #27	CARMIL2 (ENSPPRG00000023145) #28	CTCF (ENSPPRG00000014317) #29	RIPOR1 (ENSPPRG00000013506) #30	AGRP (ENSPPRG00000009953) #31	ATP6V0D1 (ENSPPRG00000009684) #32	HSD11B2 (ENSPPRG00000008932) #33	ZDHHC1 (ENSPPRG00000008488) #34	TPPP3 (ENSPPRG00000008182) #35	LRRC36 (ENSPPRG00000007845) #36	KCTD19 (ENSPPRG00000005410) #37
Caniformia	ANCESTRAL SPECIES	1	ENSGT00940000161738	ENSGT00740000117161	ENSGT00940000160211 #9	ENSGT00940000162331 #10	ENSGT00940000157672 #11	ENSGT00940000160052 #12	ENSGT00940000161047 #13	ENSGT00940000154494.b #14	ENSGT00940000157041.a #15	ENSGT00530000063853.a.b #16	ENSGT00510000047791 #17	ENSGT00510000047030 #18	ENSGT00390000006585 #19	ENSGT00390000003044 #20	ENSGT00390000018598 #21	ENSGT00940000158257 #22	ENSGT00940000156501 #23	ENSGT00390000011138 #24	ENSGT00940000153866.B #25	ENSGT00950000183211.a.a.b #26	ENSGT00390000004877 #27	ENSGT00940000161003 #28	ENSGT00940000156672 #29	ENSGT00940000153717.b #30	ENSGT00940000154258.b #31	ENSGT00390000002200.a.a #32	ENSGT00940000159716 #33	ENSGT00940000159191 #34	ENSGT00940000153875.d.b #35	ENSGT00530000063884.b #36	ENSGT00390000007606 #37
Canidae	ANCESTRAL SPECIES	11	ENSGT00550000075019	ENSGT00940000161738	ENSGT00940000160211 #9	ENSGT00940000162331 #10	ENSGT00940000157672 #11	ENSGT00940000160052 #12	ENSGT00940000161047 #13	ENSGT00940000154494.b #14	ENSGT00940000157041.a #15	ENSGT00530000063853.a.b #16	ENSGT00510000047791 #17	ENSGT00510000047030.u.a #18	ENSGT00390000006585 #19	ENSGT00390000003044 #20	ENSGT00390000018598 #21	ENSGT00940000158257 #22	ENSGT00940000156501 #23	ENSGT00390000011138 #24	ENSGT00940000153866.B #25	ENSGT00950000183211.a.a.b #26	ENSGT00390000004877 #27	ENSGT00940000161003 #28	ENSGT00940000156672 #29	ENSGT00940000153717.b #30	ENSGT00940000154258.b #31	ENSGT00390000002200.a.a #32	ENSGT00940000159716 #33	ENSGT00940000159191 #34	ENSGT00940000153875.d.b #35	ENSGT00530000063884.b #36	ENSGT00390000007606 #37
Canis_lupus	ANCESTRAL SPECIES	5	ENSGT00550000075019	ENSGT00940000161738	ENSGT00940000160211 #9	ENSGT00940000162331 #10	ENSGT00940000157672 #11	ENSGT00940000160052 #12	ENSGT00940000161047 #13	ENSGT00940000154494.b #14	ENSGT00940000157041.a #15	ENSGT00530000063853.a.b #16	ENSGT00510000047791 #17	ENSGT00510000047030.u.a.a #18	ENSGT00390000006585 #19	ENSGT00390000003044 #20	ENSGT00390000018598 #21	ENSGT00940000158257 #22	ENSGT00940000156501 #23	ENSGT00390000011138 #24	ENSGT00940000153866.B.e.a #25	ENSGT00950000183211.a.a.b #26	ENSGT00390000004877 #27	ENSGT00940000161003 #28	ENSGT00940000156672 #29	ENSGT00940000153717.b #30	ENSGT00940000154258.b #31	ENSGT00390000002200.a.a #32	ENSGT00940000159716 #33	ENSGT00940000159191 #34	ENSGT00940000153875.d.b #35	ENSGT00530000063884.b #36	ENSGT00390000007606 #37
Dog	MODERN SPECIES	33	NFATC3 (ENSCAFG00845011810)	ENSCAFG00845011878	DUS2 (ENSCAFG00845011931)	DDX28 (ENSCAFG00845012035)	DPEP2 (ENSCAFG00845012077) #9	DPEP3 (ENSCAFG00845012122) #10	SLC12A4 (ENSCAFG00845012245) #11	PSMB10 (ENSCAFG00845012486) #13	CTRL (ENSCAFG00845005982) #14	PSKH1 (ENSCAFG00845006106) #15	NRN1L (ENSCAFG00845006140) #16	EDC4 (ENSCAFG00845006216) #17	NUTF2 (ENSCAFG00845006486) #18	CENPT (ENSCAFG00845006555) #20	TSNAXIP1 (ENSCAFG00845006665) #21	RANBP10 (ENSCAFG00845006722) #22	GFOD2 (ENSCAFG00845006793) #23	C16orf86 (ENSCAFG00845006819) #24	ENKD1 (ENSCAFG00845006848) #25	PARD6A (ENSCAFG00845006886) #26	ACD (ENSCAFG00845006934) #27	CARMIL2 (ENSCAFG00845007220) #28	CTCF (ENSCAFG00845007437) #29	RIPOR1 (ENSCAFG00845007707) #30	AGRP (ENSCAFG00845008104) #31	ATP6V0D1 (ENSCAFG00845008188) #32	HSD11B2 (ENSCAFG00845008256) #33	ZDHHC1 (ENSCAFG00845008324) #34	TPPP3 (ENSCAFG00845008424) #35	LRRC36 (ENSCAFG00845008572) #36	KCTD19 (ENSCAFG00845008661) #37
Dingo	MODERN SPECIES	373	DUS2 (ENSCAFG00020019787)	DDX28 (ENSCAFG00020019785)	DPEP2 (ENSCAFG00020019738) #9	DPEP3 (ENSCAFG00020019682) #10	SLC12A4 (ENSCAFG00020018659) #11	LCAT (ENSCAFG00020018548) #12	PSMB10 (ENSCAFG00020018533) #13	CTRL (ENSCAFG00020018519) #14	PSKH1 (ENSCAFG00020018513) #15	NRN1L (ENSCAFG00020018511) #16	EDC4 (ENSCAFG00020018504) #17	ENSCAFG00020018500 #18	THAP11 (ENSCAFG00020018494) #19	ENSCAFG00020018490	TSNAXIP1 (ENSCAFG00020018480) #21	RANBP10 (ENSCAFG00020018299) #22	GFOD2 (ENSCAFG00020018284) #23	C16orf86 (ENSCAFG00020018282) #24	ENSCAFG00020018274 #25	PARD6A (ENSCAFG00020018272) #26	ACD (ENSCAFG00020018248) #27	CARMIL2 (ENSCAFG00020018193) #28	CTCF (ENSCAFG00020018189) #29	RIPOR1 (ENSCAFG00020018185) #30	AGRP (ENSCAFG00020018182) #31	ATP6V0D1 (ENSCAFG00020018180) #32	HSD11B2 (ENSCAFG00020018177) #33	ZDHHC1 (ENSCAFG00020018166) #34	TPPP3 (ENSCAFG00020018161) #35	LRRC36 (ENSCAFG00020018145) #36	KCTD19 (ENSCAFG00020018130) #37
Red fox	MODERN SPECIES	86	DUS2 (ENSVVUG00000012887)	DDX28 (ENSVVUG00000012876)	DPEP2 (ENSVVUG00000012765) #9	DPEP3 (ENSVVUG00000012749) #10	SLC12A4 (ENSVVUG00000012702) #11	LCAT (ENSVVUG00000012683) #12	PSMB10 (ENSVVUG00000012675) #13	CTRL (ENSVVUG00000012672) #14	PSKH1 (ENSVVUG00000012666) #15	NRN1L (ENSVVUG00000012660) #16	EDC4 (ENSVVUG00000012642) #17	NUTF2 (ENSVVUG00000012627) #18	THAP11 (ENSVVUG00000012623) #19	CENPT (ENSVVUG00000012613) #20	TSNAXIP1 (ENSVVUG00000012605) #21	RANBP10 (ENSVVUG00000012581) #22	GFOD2 (ENSVVUG00000012557) #23	C16orf86 (ENSVVUG00000012540) #24	ENKD1 (ENSVVUG00000012523) #25	PARD6A (ENSVVUG00000012514) #26	ACD (ENSVVUG00000012482) #27	CARMIL2 (ENSVVUG00000012192) #28	CTCF (ENSVVUG00000012154) #29	RIPOR1 (ENSVVUG00000012147) #30	AGRP (ENSVVUG00000012120) #31	ATP6V0D1 (ENSVVUG00000012104) #32	HSD11B2 (ENSVVUG00000012093) #33	ZDHHC1 (ENSVVUG00000012083) #34	TPPP3 (ENSVVUG00000012076) #35	LRRC36 (ENSVVUG00000012071) #36	KCTD19 (ENSVVUG00000012031) #37
Caniformia_b	ANCESTRAL SPECIES	2	ENSGT00940000161738	ENSGT00740000117161	ENSGT00940000160211 #9	ENSGT00940000162331 #10	ENSGT00940000157672 #11	ENSGT00940000160052 #12	ENSGT00940000161047 #13	ENSGT00940000154494.b #14	ENSGT00940000157041.a #15	ENSGT00530000063853.a.b #16	ENSGT00510000047791 #17	ENSGT00510000047030 #18	ENSGT00390000006585 #19	ENSGT00390000003044 #20	ENSGT00390000018598 #21	ENSGT00940000158257 #22	ENSGT00940000156501 #23	ENSGT00390000011138 #24	ENSGT00940000153866.B #25	ENSGT00950000183211.a.a.b #26	ENSGT00390000004877 #27	ENSGT00940000161003 #28	ENSGT00940000156672 #29	ENSGT00940000153717.b #30	ENSGT00940000154258.b #31	ENSGT00390000002200.a.a #32	ENSGT00940000159716 #33	ENSGT00940000159191 #34	ENSGT00940000153875.d.b #35	ENSGT00530000063884.b #36	ENSGT00390000007606 #37
Mustelinae	ANCESTRAL SPECIES	6	ENSGT00940000161738	ENSGT00740000117161	ENSGT00940000160211 #9	ENSGT00940000162331 #10	ENSGT00940000157672 #11	ENSGT00940000160052 #12	ENSGT00940000161047 #13	ENSGT00940000154494.b #14	ENSGT00940000157041.a #15	ENSGT00530000063853.a.b #16	ENSGT00510000047791 #17	ENSGT00510000047030 #18	ENSGT00390000006585 #19	ENSGT00390000003044 #20	ENSGT00390000018598 #21	ENSGT00940000158257 #22	ENSGT00940000156501 #23	ENSGT00390000011138 #24	ENSGT00940000153866.B #25	ENSGT00950000183211.a.a.b #26	ENSGT00390000004877 #27	ENSGT00940000161003 #28	ENSGT00940000156672 #29	ENSGT00940000153717.b #30	ENSGT00940000154258.b #31	ENSGT00390000002200.a.a #32	ENSGT00940000159716 #33	ENSGT00940000159191 #34	ENSGT00940000153875.d.b #35	ENSGT00530000063884.b #36	ENSGT00390000007606 #37
Ferret	MODERN SPECIES	174	ESRP2 (ENSMPUG00000006967)	ENSMPUG00000006942	DUS2 (ENSMPUG00000006925)	DDX28 (ENSMPUG00000006915)	DPEP2 (ENSMPUG00000006901) #9	DPEP3 (ENSMPUG00000006892) #10	SLC12A4 (ENSMPUG00000006876) #11	PSMB10 (ENSMPUG00000006787) #13	CTRL (ENSMPUG00000006782) #14	PSKH1 (ENSMPUG00000006778) #15	EDC4 (ENSMPUG00000006769) #17	NUTF2 (ENSMPUG00000006737) #18	THAP11 (ENSMPUG00000019895) #19	CENPT (ENSMPUG00000006643) #20	TSNAXIP1 (ENSMPUG00000006563) #21	RANBP10 (ENSMPUG00000006547) #22	GFOD2 (ENSMPUG00000006535) #23	C16orf86 (ENSMPUG00000006520) #24	ENKD1 (ENSMPUG00000006466) #25	PARD6A (ENSMPUG00000006443) #26	ACD (ENSMPUG00000006409) #27	CTCF (ENSMPUG00000006401) #29	RIPOR1 (ENSMPUG00000006380) #30	AGRP (ENSMPUG00000006360) #31	ATP6V0D1 (ENSMPUG00000006345) #32	HSD11B2 (ENSMPUG00000006293) #33	ZDHHC1 (ENSMPUG00000006284) #34	TPPP3 (ENSMPUG00000006277) #35	LRRC36 (ENSMPUG00000006211) #36	KCTD19 (ENSMPUG00000006157) #37	PLEKHG4 (ENSMPUG00000006141)
American mink	MODERN SPECIES	2	DDX28 (ENSNVIG00000009075)	DPEP2NB (ENSNVIG00000009083)	DPEP2 (ENSNVIG00000009096) #9	DPEP3 (ENSNVIG00000009135) #10	SLC12A4 (ENSNVIG00000009147) #11	LCAT (ENSNVIG00000009226) #12	PSMB10 (ENSNVIG00000009233) #13	CTRL (ENSNVIG00000009246) #14	PSKH1 (ENSNVIG00000009252) #15	NRN1L (ENSNVIG00000009260) #16	EDC4 (ENSNVIG00000009265) #17	NUTF2 (ENSNVIG00000009293) #18	THAP11 (ENSNVIG00000009312) #19	CENPT (ENSNVIG00000009318) #20	TSNAXIP1 (ENSNVIG00000009391) #21	RANBP10 (ENSNVIG00000009458) #22	ENSNVIG00000009579 #23	C16orf86 (ENSNVIG00000009588) #24	ENKD1 (ENSNVIG00000009600) #25	PARD6A (ENSNVIG00000009633) #26	ACD (ENSNVIG00000009654) #27	CARMIL2 (ENSNVIG00000009729) #28	CTCF (ENSNVIG00000009836) #29	RIPOR1 (ENSNVIG00000009916) #30	AGRP (ENSNVIG00000010084) #31	ATP6V0D1 (ENSNVIG00000010093) #32	HSD11B2 (ENSNVIG00000010109) #33	ZDHHC1 (ENSNVIG00000010126) #34	TPPP3 (ENSNVIG00000010145) #35	LRRC36 (ENSNVIG00000010163) #36	KCTD19 (ENSNVIG00000010210) #37
Ursidae	ANCESTRAL SPECIES	8	ENSGT00940000161738	ENSGT00740000117161	ENSGT00940000160211 #9	ENSGT00940000162331 #10	ENSGT00940000157672 #11	ENSGT00940000160052 #12	ENSGT00940000161047 #13	ENSGT00940000154494.b #14	ENSGT00940000157041.a #15	ENSGT00530000063853.a.b #16	ENSGT00510000047791 #17	ENSGT00510000047030 #18	ENSGT00390000006585 #19	ENSGT00390000003044 #20	ENSGT00390000018598 #21	ENSGT00940000158257 #22	ENSGT00940000156501 #23	ENSGT00390000011138 #24	ENSGT00940000153866.B #25	ENSGT00950000183211.a.a.b #26	ENSGT00390000004877 #27	ENSGT00940000161003 #28	ENSGT00940000156672 #29	ENSGT00940000153717.b #30	ENSGT00940000154258.b #31	ENSGT00390000002200.a.a #32	ENSGT00940000159716 #33	ENSGT00940000159191 #34	ENSGT00940000153875.d.b #35	ENSGT00530000063884.b #36	ENSGT00390000007606 #37
Giant Panda	MODERN SPECIES	3	NFATC3 (ENSAMEG00000008086)	DUS2 (ENSAMEG00000008115)	DDX28 (ENSAMEG00000019426)	ENSAMEG00000026702	ENSAMEG00000017652 #10	SLC12A4 (ENSAMEG00000017596) #11	LCAT (ENSAMEG00000030842) #12	ENSAMEG00000017576 #13	PSKH1 (ENSAMEG00000017573) #15	NRN1L (ENSAMEG00000029453) #16	EDC4 (ENSAMEG00000017551) #17	ENSAMEG00000017548 #18	THAP11 (ENSAMEG00000017547) #19	CENPT (ENSAMEG00000017537) #20	TSNAXIP1 (ENSAMEG00000017528) #21	RANBP10 (ENSAMEG00000017511) #22	GFOD2 (ENSAMEG00000017509) #23	C16orf86 (ENSAMEG00000017508) #24	ENKD1 (ENSAMEG00000017504) #25	PARD6A (ENSAMEG00000017503) #26	ACD (ENSAMEG00000017492) #27	CARMIL2 (ENSAMEG00000017460) #28	CTCF (ENSAMEG00000017438) #29	RIPOR1 (ENSAMEG00000017405) #30	AGRP (ENSAMEG00000017404) #31	ATP6V0D1 (ENSAMEG00000017393) #32	HSD11B2 (ENSAMEG00000017389) #33	ZDHHC1 (ENSAMEG00000017379) #34	LRRC36 (ENSAMEG00000017372) #36	KCTD19 (ENSAMEG00000017368) #37	PLEKHG4 (ENSAMEG00000017357)
Ursus	ANCESTRAL SPECIES	41	ENSGT00940000161738	ENSGT00740000117161	ENSGT00940000160211 #9	ENSGT00940000162331 #10	ENSGT00940000157672 #11	ENSGT00940000160052 #12	ENSGT00940000161047 #13	ENSGT00940000154494.b #14	ENSGT00940000157041.a #15	ENSGT00530000063853.a.b #16	ENSGT00510000047791 #17	ENSGT00510000047030 #18	ENSGT00390000006585 #19	ENSGT00390000003044 #20	ENSGT00390000018598 #21	ENSGT00940000158257 #22	ENSGT00940000156501 #23	ENSGT00390000011138 #24	ENSGT00940000153866.B #25	ENSGT00950000183211.a.a.b #26	ENSGT00390000004877 #27	ENSGT00940000161003 #28	ENSGT00940000156672 #29	ENSGT00940000153717.b #30	ENSGT00940000154258.b #31	ENSGT00390000002200.a.a #32	ENSGT00940000159716 #33	ENSGT00940000159191 #34	ENSGT00940000153875.d.b #35	ENSGT00530000063884.b #36	ENSGT00390000007606 #37
Polar bear	MODERN SPECIES	245	NFATC3 (ENSUMAG00000019035)	DUS2 (ENSUMAG00000019192)	DDX28 (ENSUMAG00000019200)	DPEP2NB (ENSUMAG00000019204)	DPEP2 (ENSUMAG00000019208) #9	DPEP3 (ENSUMAG00000019222) #10	SLC12A4 (ENSUMAG00000019314) #11	LCAT (ENSUMAG00000019555) #12	ENSUMAG00000019563 #14	PSKH1 (ENSUMAG00000019566) #15	NRN1L (ENSUMAG00000019568) #16	EDC4 (ENSUMAG00000019571) #17	NUTF2 (ENSUMAG00000019576) #18	CENPT (ENSUMAG00000019581) #20	TSNAXIP1 (ENSUMAG00000019587) #21	RANBP10 (ENSUMAG00000019599) #22	GFOD2 (ENSUMAG00000019610) #23	C16orf86 (ENSUMAG00000019611) #24	ENKD1 (ENSUMAG00000019613) #25	PARD6A (ENSUMAG00000019615) #26	ACD (ENSUMAG00000019617) #27	CARMIL2 (ENSUMAG00000019630) #28	CTCF (ENSUMAG00000019706) #29	RIPOR1 (ENSUMAG00000019710) #30	AGRP (ENSUMAG00000019719) #31	ATP6V0D1 (ENSUMAG00000019723) #32	HSD11B2 (ENSUMAG00000019726) #33	ZDHHC1 (ENSUMAG00000019731) #34	TPPP3 (ENSUMAG00000019745) #35	LRRC36 (ENSUMAG00000019753) #36	KCTD19 (ENSUMAG00000019780) #37
American black bear	DUPLICATION
American black bear	MODERN SPECIES	25																ENSUAMG00000015981 #22	GFOD2 (ENSUAMG00000015978) #23	C16orf86 (ENSUAMG00000015975) #24	ENKD1 (ENSUAMG00000015968) #25	PARD6A (ENSUAMG00000015961) #26	ACD (ENSUAMG00000015956) #27	CARMIL2 (ENSUAMG00000015940) #28	CTCF (ENSUAMG00000015923) #29	RIPOR1 (ENSUAMG00000015921) #30	AGRP (ENSUAMG00000015920) #31	ATP6V0D1 (ENSUAMG00000015919) #32	ENSUAMG00000015918 #33	ENSUAMG00000015917 #33	ZDHHC1 (ENSUAMG00000015914) #34	TPPP3 (ENSUAMG00000015912) #35	LRRC36 (ENSUAMG00000015910) #36
American black bear	MODERN SPECIES	26	DDX28 (ENSUAMG00000016116)	DPEP2NB (ENSUAMG00000016118)	DPEP2 (ENSUAMG00000016126) #9	DPEP3 (ENSUAMG00000016134) #10	ENSUAMG00000016137	SLC12A4 (ENSUAMG00000016401) #11	LCAT (ENSUAMG00000020664) #12	PSMB10 (ENSUAMG00000020721) #13	CTRL (ENSUAMG00000020723) #14	PSKH1 (ENSUAMG00000020728) #15	EDC4 (ENSUAMG00000020778) #17	NUTF2 (ENSUAMG00000021046) #18	THAP11 (ENSUAMG00000021051) #19	CENPT (ENSUAMG00000021056) #20	TSNAXIP1 (ENSUAMG00000021066) #21	ENSUAMG00000021072 #22
Laurasiatheria_c	ANCESTRAL SPECIES	4	ENSGT00940000161738	ENSGT00740000117161	ENSGT00940000160211 #9	ENSGT00940000162331 #10	ENSGT00940000157672 #11	ENSGT00940000160052 #12	ENSGT00940000161047 #13	ENSGT00940000154494.b #14	ENSGT00940000157041.a #15	ENSGT00530000063853.a.b #16	ENSGT00510000047791 #17	ENSGT00510000047030 #18	ENSGT00390000006585 #19	ENSGT00390000003044 #20	ENSGT00390000018598 #21	ENSGT00940000158257 #22	ENSGT00940000156501 #23	ENSGT00390000011138 #24	ENSGT00940000153866.B #25	ENSGT00950000183211.a.a.b #26	ENSGT00390000004877 #27	ENSGT00940000161003 #28	ENSGT00940000156672 #29	ENSGT00940000153717.b #30	ENSGT00940000154258.b #31	ENSGT00390000002200.a.a #32	ENSGT00940000159716 #33	ENSGT00940000159191 #34	ENSGT00940000153875.d.b #35	ENSGT00530000063884.b #36	ENSGT00390000007606 #37
Chiroptera	ANCESTRAL SPECIES	21	ENSGT00940000161738	ENSGT00740000117161	ENSGT00940000160211 #9	ENSGT00940000162331 #10	ENSGT00940000157672 #11	ENSGT00940000160052 #12	ENSGT00940000161047 #13	ENSGT00940000154494.b #14	ENSGT00940000157041.a #15	ENSGT00530000063853.a.b #16	ENSGT00510000047791 #17	ENSGT00510000047030 #18	ENSGT00390000006585 #19	ENSGT00390000003044 #20	ENSGT00390000018598 #21	ENSGT00940000158257 #22	ENSGT00940000156501 #23	ENSGT00390000011138 #24	ENSGT00940000153866.B #25	ENSGT00950000183211.a.a.b #26	ENSGT00390000004877 #27	ENSGT00940000161003 #28	ENSGT00940000156672 #29	ENSGT00940000153717.b #30	ENSGT00940000154258.b #31	ENSGT00390000002200.a.a #32	ENSGT00940000159716 #33	ENSGT00940000159191 #34	ENSGT00940000153875.d.b #35	ENSGT00530000063884.b #36	ENSGT00390000007606 #37
Microchiroptera	ANCESTRAL SPECIES	12	ENSGT00940000161738	ENSGT00740000117161	ENSGT00940000160211 #9	ENSGT00940000162331 #10	ENSGT00940000157672 #11	ENSGT00940000160052 #12	ENSGT00940000161047 #13	ENSGT00940000154494.b #14	ENSGT00940000157041.a #15	ENSGT00530000063853.a.b #16	ENSGT00510000047791 #17	ENSGT00510000047030 #18	ENSGT00390000006585 #19	ENSGT00390000003044 #20	ENSGT00390000018598 #21	ENSGT00940000158257 #22	ENSGT00940000156501 #23	ENSGT00390000011138 #24	ENSGT00940000153866.B #25	ENSGT00950000183211.a.a.b #26	ENSGT00390000004877 #27	ENSGT00940000161003 #28	ENSGT00940000156672 #29	ENSGT00940000153717.b #30	ENSGT00940000154258.b #31	ENSGT00390000002200.a.a #32	ENSGT00940000159716 #33	ENSGT00940000159191 #34	ENSGT00940000153875.d.b #35	ENSGT00530000063884.b #36	ENSGT00390000007606 #37
Microbat	MODERN SPECIES	1211	ENSMLUG00000005918	DUS2 (ENSMLUG00000005904)	DDX28 (ENSMLUG00000005899)	DPEP2 (ENSMLUG00000005889) #9	DPEP3 (ENSMLUG00000005885) #10	SLC12A4 (ENSMLUG00000005877) #11	LCAT (ENSMLUG00000026860) #12	PSMB10 (ENSMLUG00000005876) #13	CTRL (ENSMLUG00000005874) #14	PSKH1 (ENSMLUG00000005872) #15	EDC4 (ENSMLUG00000005853) #17	NUTF2 (ENSMLUG00000025175) #18	THAP11 (ENSMLUG00000005845) #19	CENPT (ENSMLUG00000010268) #20	TSNAXIP1 (ENSMLUG00000005835) #21	RANBP10 (ENSMLUG00000005821) #22	GFOD2 (ENSMLUG00000005285) #23	C16orf86 (ENSMLUG00000005279) #24	ENKD1 (ENSMLUG00000005274) #25	PARD6A (ENSMLUG00000005265) #26	ACD (ENSMLUG00000005251) #27	CARMIL2 (ENSMLUG00000005225) #28	CTCF (ENSMLUG00000005216) #29	RIPOR1 (ENSMLUG00000005201) #30	AGRP (ENSMLUG00000005196) #31	ATP6V0D1 (ENSMLUG00000005187) #32	HSD11B2 (ENSMLUG00000024893) #33	ZDHHC1 (ENSMLUG00000005174) #34	TPPP3 (ENSMLUG00000005171) #35	ENSMLUG00000026149	LRRC36 (ENSMLUG00000001203) #36
Greater horseshoe bat	MODERN SPECIES	6	DDX28 (ENSRFEG00010005330)	DPEP2NB (ENSRFEG00010005323)	DPEP2 (ENSRFEG00010019253) #9	DPEP3 (ENSRFEG00010019237) #10	SLC12A4 (ENSRFEG00010018351) #11	PSMB10 (ENSRFEG00010018272) #13	CTRL (ENSRFEG00010018250) #14	PSKH1 (ENSRFEG00010018215) #15	NRN1L (ENSRFEG00010018170) #16	EDC4 (ENSRFEG00010018129) #17	NUTF2 (ENSRFEG00010018077) #18	THAP11 (ENSRFEG00010018054) #19	CENPT (ENSRFEG00010017973) #20	ENSRFEG00010017936	TSNAXIP1 (ENSRFEG00010017882) #21	RANBP10 (ENSRFEG00010017753) #22	C16orf86 (ENSRFEG00010017691) #24	ENKD1 (ENSRFEG00010017572) #25	PARD6A (ENSRFEG00010017499) #26	ACD (ENSRFEG00010017177) #27	CARMIL2 (ENSRFEG00010017116) #28	CTCF (ENSRFEG00010017029) #29	RIPOR1 (ENSRFEG00010016037) #30	AGRP (ENSRFEG00010015961) #31	ATP6V0D1 (ENSRFEG00010015904) #32	HSD11B2 (ENSRFEG00010015871) #33	ZDHHC1 (ENSRFEG00010015816) #34	TPPP3 (ENSRFEG00010015768) #35	LRRC36 (ENSRFEG00010015268) #36	KCTD19 (ENSRFEG00010014975) #37	ENSRFEG00010014828
Megabat	MODERN SPECIES	557	NFATC3 (ENSPVAG00000016625)	DUS2 (ENSPVAG00000016624)	DPEP2 (ENSPVAG00000016621) #9	DPEP3 (ENSPVAG00000016618) #10	SLC12A4 (ENSPVAG00000016615) #11	LCAT (ENSPVAG00000016614) #12	PSMB10 (ENSPVAG00000016612) #13	CTRL (ENSPVAG00000016611) #14	PSKH1 (ENSPVAG00000016609) #15	NRN1L (ENSPVAG00000016608) #16	EDC4 (ENSPVAG00000016606) #17	NUTF2 (ENSPVAG00000016605) #18	THAP11 (ENSPVAG00000016604) #19	CENPT (ENSPVAG00000016601) #20	TSNAXIP1 (ENSPVAG00000016600) #21	RANBP10 (ENSPVAG00000016599) #22	GFOD2 (ENSPVAG00000016598) #23	C16orf86 (ENSPVAG00000016597) #24	ENKD1 (ENSPVAG00000016596) #25	PARD6A (ENSPVAG00000016595) #26	ACD (ENSPVAG00000016594) #27	CARMIL2 (ENSPVAG00000016591) #28	CTCF (ENSPVAG00000016588) #29	RIPOR1 (ENSPVAG00000016586) #30
Equus	ANCESTRAL SPECIES	20	ENSGT00550000075019	ENSGT00940000161738	ENSGT00740000117161.e.b	ENSGT00940000160211 #9	ENSGT00940000162331 #10	ENSGT00940000157672 #11	ENSGT00940000160052 #12	ENSGT00940000161047 #13	ENSGT00940000157041.a #15	ENSGT00530000063853.a.b #16	ENSGT00510000047791 #17	ENSGT00510000047030 #18	ENSGT00390000006585 #19	ENSGT00390000003044 #20	ENSGT00390000018598 #21	ENSGT00940000158257 #22	ENSGT00940000156501 #23	ENSGT00390000011138 #24	ENSGT00940000153866.B #25	ENSGT00950000183211.a.a.b #26	ENSGT00390000004877 #27	ENSGT00940000161003 #28	ENSGT00940000156672 #29	ENSGT00940000153717.b #30	ENSGT00940000154258.b #31	ENSGT00390000002200.a.a #32	ENSGT00940000159716 #33	ENSGT00940000159191 #34	ENSGT00940000153875.d.b #35	ENSGT00530000063884.b #36	ENSGT00390000007606 #37
Horse	MODERN SPECIES	22	ESRP2 (ENSECAG00000017375)	NFATC3 (ENSECAG00000014089)	DDX28 (ENSECAG00000006451)	DPEP2 (ENSECAG00000017260) #9	DPEP3 (ENSECAG00000058192) #10	SLC12A4 (ENSECAG00000011181) #11	LCAT (ENSECAG00000022392) #12	PSMB10 (ENSECAG00000012022) #13	PSKH1 (ENSECAG00000009670) #15	NRN1L (ENSECAG00000008922) #16	EDC4 (ENSECAG00000010812) #17	NUTF2 (ENSECAG00000021530) #18	THAP11 (ENSECAG00000006431) #19	CENPT (ENSECAG00000017388) #20	TSNAXIP1 (ENSECAG00000009650) #21	RANBP10 (ENSECAG00000012511) #22	GFOD2 (ENSECAG00000010839) #23	C3H16orf86 (ENSECAG00000010822) #24	ENKD1 (ENSECAG00000009291) #25	PARD6A (ENSECAG00000006714) #26	ACD (ENSECAG00000020293) #27	CARMIL2 (ENSECAG00000010729) #28	CTCF (ENSECAG00000015924) #29	AGRP (ENSECAG00000016828) #31	RIPOR1 (ENSECAG00000018681) #30	ATP6V0D1 (ENSECAG00000015817) #32	HSD11B2 (ENSECAG00000014152) #33	ZDHHC1 (ENSECAG00000010730) #34	TPPP3 (ENSECAG00000007133) #35	LRRC36 (ENSECAG00000021516) #36	PLEKHG4 (ENSECAG00000006999)
Donkey	MODERN SPECIES	20	DUS2 (ENSEASG00005020405)	DDX28 (ENSEASG00005029651)	ENSEASG00005032106	DPEP2 (ENSEASG00005020365) #9	DPEP3 (ENSEASG00005020330) #10	SLC12A4 (ENSEASG00005014839) #11	LCAT (ENSEASG00005014365) #12	PSMB10 (ENSEASG00005014362) #13	PSKH1 (ENSEASG00005014355) #15	NRN1L (ENSEASG00005024151) #16	EDC4 (ENSEASG00005013007) #17	NUTF2 (ENSEASG00005034111) #18	THAP11 (ENSEASG00005027997) #19	CENPT (ENSEASG00005012925) #20	TSNAXIP1 (ENSEASG00005012923) #21	RANBP10 (ENSEASG00005012883) #22	GFOD2 (ENSEASG00005034590) #23	C16orf86 (ENSEASG00005012870) #24	ENKD1 (ENSEASG00005012867) #25	PARD6A (ENSEASG00005034441) #26	ACD (ENSEASG00005012855) #27	CARMIL2 (ENSEASG00005012824) #28	CTCF (ENSEASG00005012799) #29	RIPOR1 (ENSEASG00005012769) #30	AGRP (ENSEASG00005012748) #31	ATP6V0D1 (ENSEASG00005012742) #32	HSD11B2 (ENSEASG00005012736) #33	ZDHHC1 (ENSEASG00005012723) #34	TPPP3 (ENSEASG00005028584) #35	LRRC36 (ENSEASG00005012707) #36	KCTD19 (ENSEASG00005012701) #37
Eulipotyphla	ANCESTRAL SPECIES																	ENSGT00940000158257 #22
Common shrew	MODERN SPECIES	2915															ENSSARG00000008500 #20	RANBP10 (ENSSARG00000008466) #22
Hedgehog	MODERN SPECIES	3859																RANBP10 (ENSEEUG00000003181) #22
Atlantogenata	ANCESTRAL SPECIES	24	ENSGT00550000075019	ENSGT00940000161738	ENSGT00940000160211 #9	ENSGT00940000162331 #10	ENSGT00940000157672 #11	ENSGT00940000160052 #12	ENSGT00940000161047 #13	ENSGT00940000154494.b #14	ENSGT00940000157041.a #15	ENSGT00530000063853.a.b #16	ENSGT00510000047791 #17	ENSGT00510000047030 #18	ENSGT00390000006585 #19	ENSGT00390000003044 #20	ENSGT00390000018598 #21	ENSGT00940000158257 #22	ENSGT00940000156501 #23	ENSGT00390000011138 #24	ENSGT00940000153866.B #25	ENSGT00950000183211.a.a.b #26	ENSGT00390000004877 #27	ENSGT00940000161003 #28	ENSGT00940000156672 #29	ENSGT00940000153717.b #30	ENSGT00940000154258.b #31	ENSGT00390000002200.a.a #32	ENSGT00940000159716 #33	ENSGT00940000159191 #34	ENSGT00940000153875.d.b #35	ENSGT00530000063884.b #36	ENSGT00390000007606 #37
Xenarthra	ANCESTRAL SPECIES	53	ENSGT00940000157187	ENSGT00940000156131.a.b	ENSGT00550000075019	ENSGT00940000161738	ENSGT00940000162331 #10	ENSGT00940000157672 #11	ENSGT00940000160052 #12	ENSGT00940000161047 #13	ENSGT00940000154494.b #14	ENSGT00940000157041.a #15	ENSGT00530000063853.a.b #16	ENSGT00510000047791 #17	ENSGT00390000006585 #19	ENSGT00390000003044 #20	ENSGT00390000018598 #21	ENSGT00940000158257 #22	ENSGT00940000156501 #23	ENSGT00390000011138 #24	ENSGT00940000153866.B #25	ENSGT00950000183211.a.a.b #26	ENSGT00390000004877 #27	ENSGT00940000161003 #28	ENSGT00940000156672 #29	ENSGT00940000153717.b #30	ENSGT00940000154258.b #31
Armadillo	MODERN SPECIES	1663	ESRP2 (ENSDNOG00000018588)	NFATC3 (ENSDNOG00000018583)	DUS2 (ENSDNOG00000018578)	DDX28 (ENSDNOG00000033593)	ENSDNOG00000009413 #10	SLC12A4 (ENSDNOG00000042023) #11	LCAT (ENSDNOG00000023951) #12	ENSDNOG00000001491 #14	PSKH1 (ENSDNOG00000031554) #15	NRN1L (ENSDNOG00000011805) #16	EDC4 (ENSDNOG00000011779) #17	ENSDNOG00000048083	THAP11 (ENSDNOG00000009718) #19	CENPT (ENSDNOG00000040033) #20	TSNAXIP1 (ENSDNOG00000016758) #21	RANBP10 (ENSDNOG00000034221) #22	GFOD2 (ENSDNOG00000023692) #23	C16orf86 (ENSDNOG00000025508) #24	ENKD1 (ENSDNOG00000045136) #25	PARD6A (ENSDNOG00000001484) #26	ACD (ENSDNOG00000001487) #27	CARMIL2 (ENSDNOG00000041030) #28	CTCF (ENSDNOG00000038156) #29	RIPOR1 (ENSDNOG00000047197) #30	ENSDNOG00000011853 #31	ENSDNOG00000033771
Sloth	MODERN SPECIES	3419																ENSCHOG00000002435 #22
Afrotheria	ANCESTRAL SPECIES	48	ENSGT00940000156131.a.b	ENSGT00550000075019	ENSGT00940000161738	ENSGT00940000160211 #9	ENSGT00940000162331 #10	ENSGT00940000157672 #11	ENSGT00940000160052 #12	ENSGT00940000161047 #13	ENSGT00940000154494.b #14	ENSGT00940000157041.a #15	ENSGT00530000063853.a.b #16	ENSGT00510000047791 #17	ENSGT00510000047030 #18	ENSGT00390000003044 #20	ENSGT00390000018598 #21	ENSGT00940000158257 #22	ENSGT00940000156501 #23	ENSGT00390000011138 #24	ENSGT00940000153866.B #25	ENSGT00950000183211.a.a.b #26	ENSGT00390000004877 #27	ENSGT00940000161003 #28	ENSGT00940000156672 #29	ENSGT00940000153717.b #30	ENSGT00940000154258.b #31	ENSGT00390000002200.a.a #32	ENSGT00940000159716 #33	ENSGT00940000159191 #34	ENSGT00940000153875.d.b #35	ENSGT00530000063884.b #36	ENSGT00390000007606 #37
Afrotheria_a	ANCESTRAL SPECIES	47	ENSGT00940000156131.a.b	ENSGT00550000075019	ENSGT00940000161738	ENSGT00940000160211 #9	ENSGT00940000162331 #10	ENSGT00940000157672 #11	ENSGT00940000160052 #12	ENSGT00940000161047 #13	ENSGT00940000154494.b #14	ENSGT00940000157041.a #15	ENSGT00530000063853.a.b #16	ENSGT00510000047791 #17	ENSGT00510000047030 #18	ENSGT00390000003044 #20	ENSGT00390000018598 #21	ENSGT00940000158257 #22	ENSGT00940000156501 #23	ENSGT00390000011138 #24	ENSGT00940000153866.B #25	ENSGT00950000183211.a.a.b #26	ENSGT00390000004877 #27	ENSGT00940000161003 #28	ENSGT00940000156672 #29	ENSGT00940000153717.b #30	ENSGT00940000154258.b #31	ENSGT00390000002200.a.a #32	ENSGT00940000159716 #33	ENSGT00940000159191 #34	ENSGT00940000153875.d.b #35	ENSGT00530000063884.b #36	ENSGT00390000007606 #37
Elephant	MODERN SPECIES	419	ESRP2 (ENSLAFG00000014609)	NFATC3 (ENSLAFG00000014599)	DUS2 (ENSLAFG00000014594)	DDX28 (ENSLAFG00000031239)	DPEP2 (ENSLAFG00000010421) #9	DPEP3 (ENSLAFG00000010415) #10	SLC12A4 (ENSLAFG00000010406) #11	LCAT (ENSLAFG00000028979) #12	PSMB10 (ENSLAFG00000028527) #13	PSKH1 (ENSLAFG00000022038) #15	NRN1L (ENSLAFG00000012400) #16	EDC4 (ENSLAFG00000012385) #17	NUTF2 (ENSLAFG00000031037) #18	CENPT (ENSLAFG00000006545) #20	TSNAXIP1 (ENSLAFG00000006543) #21	RANBP10 (ENSLAFG00000007130) #22	GFOD2 (ENSLAFG00000031426) #23	C16orf86 (ENSLAFG00000007225) #24	ENKD1 (ENSLAFG00000007125) #25	PARD6A (ENSLAFG00000007120) #26	ACD (ENSLAFG00000007115) #27	CARMIL2 (ENSLAFG00000007106) #28	CTCF (ENSLAFG00000007101) #29	RIPOR1 (ENSLAFG00000030162) #30	AGRP (ENSLAFG00000016061) #31	ATP6V0D1 (ENSLAFG00000008957) #32	HSD11B2 (ENSLAFG00000008952) #33	ZDHHC1 (ENSLAFG00000004648) #34	TPPP3 (ENSLAFG00000009485) #35	LRRC36 (ENSLAFG00000004644) #36	KCTD19 (ENSLAFG00000004638) #37
Hyrax	MODERN SPECIES	3053														CENPT (ENSPCAG00000000170) #20	TSNAXIP1 (ENSPCAG00000000159) #21	RANBP10 (ENSPCAG00000000142) #22
Tenrec	MODERN SPECIES	9004															ENSETEG00000015815	RANBP10 (ENSETEG00000015814) #22
Marsupialia	ANCESTRAL SPECIES	17	ENSGT00940000161738	ENSGT00740000117161	ENSGT00940000160211 #9	ENSGT01030000235333	ENSGT00940000157672 #11	ENSGT00940000160052 #12	ENSGT00940000161047 #13	ENSGT00940000154494.b #14	ENSGT00940000157041.a #15	ENSGT00530000063853.a.b #16	ENSGT00510000047791 #17	ENSGT00510000047030 #18	ENSGT00390000006585 #19	ENSGT00390000003044 #20	ENSGT00390000018598 #21	ENSGT00940000158257 #22	ENSGT00940000156501 #23	ENSGT00390000011138 #24	ENSGT00940000153866.B #25	ENSGT00950000183211.a.a.b #26	ENSGT00390000004877 #27	ENSGT00940000161003 #28	ENSGT00940000156672 #29	ENSGT00940000153717.b #30	ENSGT00940000163363	ENSGT00940000154258.b #31	ENSGT00390000002200.a.a.q #32	ENSGT00940000159716 #33	ENSGT00940000159191 #34	ENSGT00940000153875.d.b #35	ENSGT00530000063884.b #36
Opossum	MODERN SPECIES		DDX28 (ENSMODG00000005303)	DPEP2NB (ENSMODG00000039688)	DPEP2 (ENSMODG00000005335) #9	SLC12A4 (ENSMODG00000005393) #11	LCAT (ENSMODG00000005405) #12	PSMB10 (ENSMODG00000005421) #13	CTRL (ENSMODG00000005442) #14	ENSMODG00000027594	ENSMODG00000005449 #15	NRN1L (ENSMODG00000048040) #16	EDC4 (ENSMODG00000005510) #17	ENSMODG00000005517 #18	THAP11 (ENSMODG00000005522) #19	ENSMODG00000005562 #20	TSNAXIP1 (ENSMODG00000005575) #21	RANBP10 (ENSMODG00000005615) #22	GFOD2 (ENSMODG00000005668) #23	ENSMODG00000045189 #24	ENSMODG00000005678 #25	PARD6A (ENSMODG00000005697) #26	ENSMODG00000005704 #27	CARMIL2 (ENSMODG00000005734) #28	CTCF (ENSMODG00000005757) #29	RIPOR1 (ENSMODG00000005845) #30	ENSMODG00000041452	ENSMODG00000005860	ENSMODG00000045811	AGRP (ENSMODG00000005903) #31	ENSMODG00000005918 #32	ZDHHC1 (ENSMODG00000005943) #34	TPPP3 (ENSMODG00000005950) #35
Marsupialia_b	ANCESTRAL SPECIES	19	ENSGT00940000161738	ENSGT00740000117161	ENSGT00940000160211 #9	ENSGT01030000235333	ENSGT00940000157672 #11	ENSGT00940000160052 #12	ENSGT00940000161047 #13	ENSGT00940000154494.b #14	ENSGT00940000157041.a #15	ENSGT00530000063853.a.b #16	ENSGT00510000047791 #17	ENSGT00510000047030 #18	ENSGT00390000006585 #19	ENSGT00390000003044 #20	ENSGT00390000018598 #21	ENSGT00940000158257 #22	ENSGT00940000156501 #23	ENSGT00390000011138 #24	ENSGT00940000153866.B #25	ENSGT00950000183211.a.a.b #26	ENSGT00390000004877 #27	ENSGT00940000161003 #28	ENSGT00940000156672 #29	ENSGT00940000153717.b #30	ENSGT00940000163363	ENSGT00940000154258.b #31	ENSGT00390000002200.a.a.q #32	ENSGT00940000159716 #33	ENSGT00940000159191 #34	ENSGT00940000153875.d.b #35	ENSGT00530000063884.b #36
Diprotodontia	ANCESTRAL SPECIES	13	ENSGT00940000161738	ENSGT00740000117161	ENSGT00940000160211 #9	ENSGT01030000235333	ENSGT00940000157672 #11	ENSGT00940000160052 #12	ENSGT00940000161047 #13	ENSGT00940000154494.b #14	ENSGT00940000157041.a #15	ENSGT00530000063853.a.b #16	ENSGT00510000047791 #17	ENSGT00510000047030 #18	ENSGT00390000006585 #19	ENSGT00390000003044 #20	ENSGT00390000018598 #21	ENSGT00940000158257 #22	ENSGT00940000156501 #23	ENSGT00390000011138 #24	ENSGT00940000153866.B #25	ENSGT00950000183211.a.a.b #26	ENSGT00390000004877 #27	ENSGT00940000161003 #28	ENSGT00940000156672 #29	ENSGT00940000153717.b #30	ENSGT00940000163363	ENSGT00940000154258.b #31	ENSGT00390000002200.a.a.q #32	ENSGT00940000159716 #33	ENSGT00940000159191 #34	ENSGT00940000153875.d.b #35	ENSGT00530000063884.b #36
Diprotodontia_a	ANCESTRAL SPECIES	14	ENSGT00940000161738	ENSGT00740000117161	ENSGT00940000160211 #9	ENSGT01030000235333	ENSGT00940000157672 #11	ENSGT00940000160052 #12	ENSGT00940000161047 #13	ENSGT00940000154494.b #14	ENSGT00940000157041.a #15	ENSGT00530000063853.a.b #16	ENSGT00510000047791 #17	ENSGT00510000047030 #18	ENSGT00390000006585 #19	ENSGT00390000003044 #20	ENSGT00390000018598 #21	ENSGT00940000158257 #22	ENSGT00940000156501 #23	ENSGT00390000011138 #24	ENSGT00940000153866.B #25	ENSGT00950000183211.a.a.b #26	ENSGT00390000004877 #27	ENSGT00940000161003 #28	ENSGT00940000156672 #29	ENSGT00940000153717.b #30	ENSGT00940000163363	ENSGT00940000154258.b #31	ENSGT00390000002200.a.a.q #32	ENSGT00940000159716 #33	ENSGT00940000159191 #34	ENSGT00940000153875.d.b #35	ENSGT00530000063884.b #36
koala	MODERN SPECIES	34	DDX28 (ENSPCIG00000031478)	DPEP2NB (ENSPCIG00000028061)	DPEP2 (ENSPCIG00000028054) #9	ENSPCIG00000036165	SLC12A4 (ENSPCIG00000028053) #11	LCAT (ENSPCIG00000028051) #12	PSMB10 (ENSPCIG00000028050) #13	CTRL (ENSPCIG00000028049) #14	PSKH1 (ENSPCIG00000028048) #15	ENSPCIG00000033288 #16	EDC4 (ENSPCIG00000028045) #17	ENSPCIG00000028043 #18	THAP11 (ENSPCIG00000034752) #19	ENSPCIG00000028041 #20	TSNAXIP1 (ENSPCIG00000000755) #21	RANBP10 (ENSPCIG00000017558) #22	GFOD2 (ENSPCIG00000017555) #23	ENSPCIG00000017556 #24	ENSPCIG00000033752 #25	PARD6A (ENSPCIG00000036354) #26	ENSPCIG00000017553 #27	CARMIL2 (ENSPCIG00000017552) #28	CTCF (ENSPCIG00000017551) #29	ENSPCIG00000000375	ATP6V0D1 (ENSPCIG00000031553) #32	HSD11B2 (ENSPCIG00000032213) #33	ZDHHC1 (ENSPCIG00000017547) #34	TPPP3 (ENSPCIG00000017546) #35	LRRC36 (ENSPCIG00000017545) #36	KCTD19 (ENSPCIG00000017543) #37	ENSPCIG00000017542
Common wonbat	MODERN SPECIES	312	DUS2 (ENSVURG00010021311)	DPEP2NB (ENSVURG00010021323)	DPEP2 (ENSVURG00010021327) #9	ENSVURG00010021335	SLC12A4 (ENSVURG00010021340) #11	LCAT (ENSVURG00010021362) #12	PSMB10 (ENSVURG00010021366) #13	CTRL (ENSVURG00010021380) #14	PSKH1 (ENSVURG00010021384) #15	NRN1L (ENSVURG00010021386) #16	EDC4 (ENSVURG00010021391) #17	NUTF2 (ENSVURG00010021406) #18	THAP11 (ENSVURG00010021412) #19	ENSVURG00010021415 #20	TSNAXIP1 (ENSVURG00010021419) #21	RANBP10 (ENSVURG00010021423) #22	GFOD2 (ENSVURG00010021429) #23	ENSVURG00010021433 #24	ENKD1 (ENSVURG00010021436) #25	PARD6A (ENSVURG00010021440) #26	ENSVURG00010021443 #27	ENSVURG00010021449	CTCF (ENSVURG00010021453) #29	RIPOR1 (ENSVURG00010021475) #30	ENSVURG00010021530	ENSVURG00010021537	AGRP (ENSVURG00010021542) #31	ATP6V0D1 (ENSVURG00010021547) #32	HSD11B2 (ENSVURG00010021554) #33	ZDHHC1 (ENSVURG00010021560) #34	TPPP3 (ENSVURG00010021572) #35
Wallaby	MODERN SPECIES	4853																RANBP10 (ENSMEUG00000009879) #22
Tasmanian devil	MODERN SPECIES	1	ESRP2 (ENSSHAG00000000063)	NFATC3 (ENSSHAG00000010150)	DUS2 (ENSSHAG00000009332)	DPEP2NB (ENSSHAG00000008984)	DPEP2 (ENSSHAG00000008706) #9	SLC12A4 (ENSSHAG00000007937) #11	LCAT (ENSSHAG00000007837) #12	PSMB10 (ENSSHAG00000007728) #13	CTRL (ENSSHAG00000027394) #14	PSKH1 (ENSSHAG00000006746) #15	ENSSHAG00000023733 #16	EDC4 (ENSSHAG00000006291) #17	THAP11 (ENSSHAG00000023897) #19	ENSSHAG00000005061 #20	TSNAXIP1 (ENSSHAG00000004554) #21	RANBP10 (ENSSHAG00000026180) #22	GFOD2 (ENSSHAG00000003095) #23	ENSSHAG00000030069 #24	ENKD1 (ENSSHAG00000005072) #25	ENSSHAG00000032109 #26	ENSSHAG00000030816 #27	CARMIL2 (ENSSHAG00000004365) #28	CTCF (ENSSHAG00000023860) #29	RIPOR1 (ENSSHAG00000001542) #30	ENSSHAG00000014097	ENSSHAG00000013664 #31	ENSSHAG00000021333 #32	HSD11B2 (ENSSHAG00000029535) #33	ZDHHC1 (ENSSHAG00000012709) #34	LRRC36 (ENSSHAG00000012364) #36	KCTD19 (ENSSHAG00000012115) #37
Platypus	MODERN SPECIES	84	DUS2 (ENSOANG00000042720)	ENSOANG00000042870	ENSOANG00000020606	DPEP2 (ENSOANG00000031142) #9	SLC12A4 (ENSOANG00000009470) #11	LCAT (ENSOANG00000013844) #12	PSMB10 (ENSOANG00000013843) #13	ENSOANG00000013842	CTRL (ENSOANG00000013841) #14	PSKH1 (ENSOANG00000014111) #15	ENSOANG00000050226 #16	EDC4 (ENSOANG00000012299) #17	ENSOANG00000046727 #18	ENSOANG00000006140 #19	ENSOANG00000009563 #21	RANBP10 (ENSOANG00000009562) #22	GFOD2 (ENSOANG00000004601) #23	ENKD1 (ENSOANG00000004479) #25	PARD6A (ENSOANG00000004480) #26	ENSOANG00000051017 #27	CARMIL2 (ENSOANG00000000267) #28	CTCF (ENSOANG00000041591) #29	RIPOR1 (ENSOANG00000009323) #30	ENSOANG00000003542	ENSOANG00000003541 #31	ATP6V0D1 (ENSOANG00000041210) #32	HSD11B2 (ENSOANG00000009417) #33	ENSOANG00000020405 #37	ENSOANG00000036976	FHOD1 (ENSOANG00000015194)	TMEM208 (ENSOANG00000036828)
Sauria	ANCESTRAL SPECIES	14			ENSGT00390000008139	ENSGT00940000160637	ENSGT00940000159455	ENSGT00940000156252	ENSGT01030000234613.a.b	ENSGT00940000154494.b #14	ENSGT00940000157041.a #15	ENSGT00530000063853.a.b #16	ENSGT00510000047791 #17	ENSGT00510000047030 #18	ENSGT00390000006585 #19	ENSGT00390000003044 #20	ENSGT00390000018598 #21	ENSGT00940000158257 #22	ENSGT00940000156501 #23	ENSGT00390000011138 #24	ENSGT00940000153866.B #25	ENSGT00950000183211.a.a.b #26	ENSGT00390000004877 #27	ENSGT00940000161003 #28	ENSGT00940000156672 #29	ENSGT00940000153717.b #30	ENSGT00940000163363.e.a.a.b	ENSGT00940000163363.e.a.b	ENSGT00940000162986.q.a	ENSGT00390000015366	ENSGT00940000155010	ENSGT00940000157942	ENSGT01030000234618.A
Lepidosauria	ANCESTRAL SPECIES	110					ENSGT00390000008139	ENSGT00940000160637	ENSGT00940000159455	ENSGT00940000156252	ENSGT01030000234613.a.b	ENSGT00940000154494.b #14	ENSGT00940000157041.a #15	ENSGT00530000063853.a.b #16	ENSGT00510000047791 #17	ENSGT00390000003044 #20	ENSGT00390000018598 #21	ENSGT00940000158257 #22	ENSGT00940000156501 #23	ENSGT00390000011138 #24	ENSGT00940000153866.B #25	ENSGT00950000183211.a.a.b #26	ENSGT00390000004877 #27	ENSGT00940000161003 #28	ENSGT00940000156672 #29	ENSGT00940000153717.b #30	ENSGT00940000163363.e.a.a.b	ENSGT00940000163363.e.a.b	ENSGT00940000166017	ENSGT00940000157335	ENSGT00940000153348.A
Episquamata	ANCESTRAL SPECIES	11	ENSGT00940000153875.d.b #35	ENSGT00940000159191 #34	ENSGT00390000008139	ENSGT00940000160637	ENSGT00940000159455	ENSGT00940000156252	ENSGT01030000234613.a.b	ENSGT00940000154494.b #14	ENSGT00940000157041.a #15	ENSGT00530000063853.a.b #16	ENSGT00510000047791 #17	ENSGT00510000047030 #18	ENSGT00390000006585 #19	ENSGT00390000003044 #20	ENSGT00390000018598 #21	ENSGT00940000158257 #22	ENSGT00940000163363.e.b.e.a	ENSGT00940000156501 #23	ENSGT00390000011138 #24	ENSGT00940000153866.B #25	ENSGT00950000183211.a.a.b #26	ENSGT00390000004877 #27	ENSGT00940000161003 #28	ENSGT00940000156672 #29	ENSGT00940000153717.b #30	ENSGT00940000163363.e.a.a.b	ENSGT00940000163363.e.a.b.e.a	ENSGT00940000163363.e.a.b.e.b.a	ENSGT00940000166017	ENSGT00940000157335	ENSGT00940000153348.A
Laterata	ANCESTRAL SPECIES	19	ENSGT00940000153875.d.b #35	ENSGT00940000159191 #34	ENSGT00390000008139	ENSGT00940000160637	ENSGT00940000159455	ENSGT00940000156252	ENSGT01030000234613.a.b	ENSGT00950000182966.A	ENSGT00940000157041.a #15	ENSGT00530000063853.a.b #16	ENSGT00510000047791 #17	ENSGT00510000047030 #18	ENSGT00390000006585 #19	ENSGT00390000003044 #20	ENSGT00390000018598 #21	ENSGT00940000158257 #22	ENSGT00940000163363.e.b.e.a	ENSGT00940000156501 #23	ENSGT00390000011138 #24	ENSGT00940000153866.B #25	ENSGT00950000183211.a.a.b #26	ENSGT00390000004877 #27	ENSGT00940000161003 #28	ENSGT00940000156672 #29	ENSGT00940000153717.b #30	ENSGT00940000163363.e.a.a.b	ENSGT00940000163363.e.a.b.e.a	ENSGT00940000163363.e.a.b.e.b.a	ENSGT00940000162986.q.a	ENSGT00390000015366	ENSGT00940000155010
Common wall lizard	MODERN SPECIES	16	ZDHHC1 (ENSPMRG00000007928) #34	TMEM208 (ENSPMRG00000007936)	ENSPMRG00000007940	ELMO3 (ENSPMRG00000007947)	E2F4 (ENSPMRG00000007959)	EXOC3L1 (ENSPMRG00000007976)	ENSPMRG00000007981	ENSPMRG00000007989	PSKH1 (ENSPMRG00000007996) #15	NRN1L (ENSPMRG00000008004) #16	EDC4 (ENSPMRG00000008009) #17	NUTF2 (ENSPMRG00000008028) #18	THAP11 (ENSPMRG00000008033) #19	ENSPMRG00000008037 #20	ENSPMRG00000008046	RANBP10 (ENSPMRG00000008058) #22	ENSPMRG00000008074	GFOD2 (ENSPMRG00000008087) #23	ENKD1 (ENSPMRG00000008097) #25	PARD6A (ENSPMRG00000008102) #26	ENSPMRG00000008119 #27	CARMIL2 (ENSPMRG00000008176) #28	ENSPMRG00000008236	CTCF (ENSPMRG00000008245) #29	RIPOR1 (ENSPMRG00000008273) #30	ENSPMRG00000008334	ENSPMRG00000008365	ENSPMRG00000008399	ENSPMRG00000008404	TMEM231 (ENSPMRG00000008411)	GABARAPL2 (ENSPMRG00000008419)
Argentine black and white tegu	MODERN SPECIES	57	RRAD (ENSSMRG00000011024)	TPPP3 (ENSSMRG00000011023) #35	ZDHHC1 (ENSSMRG00000011021) #34	TMEM208 (ENSSMRG00000011019)	ENSSMRG00000011018	ELMO3 (ENSSMRG00000011015)	E2F4 (ENSSMRG00000011011)	EXOC3L1 (ENSSMRG00000011010)	PSKH1 (ENSSMRG00000011009) #15	NRN1L (ENSSMRG00000011002) #16	EDC4 (ENSSMRG00000008780) #17	NUTF2 (ENSSMRG00000008773) #18	ENSSMRG00000008772 #19	ENSSMRG00000008770 #20	TSNAXIP1 (ENSSMRG00000008758) #21	RANBP10 (ENSSMRG00000008752) #22	GFOD2 (ENSSMRG00000008750) #23	ENSSMRG00000008748 #24	ENKD1 (ENSSMRG00000008747) #25	PARD6A (ENSSMRG00000008746) #26	ENSSMRG00000008742 #27	CTCF (ENSSMRG00000008740) #29	RIPOR1 (ENSSMRG00000008732) #30	ENSSMRG00000008728	RHPN2 (ENSSMRG00000008722)	GPATCH1 (ENSSMRG00000008672)
Toxicofera	ANCESTRAL SPECIES	16	ENSGT00940000153875.d.b #35	ENSGT00940000159191 #34	ENSGT00390000008139	ENSGT00940000160637	ENSGT00940000159455	ENSGT00940000156252	ENSGT01030000234613.a.b	ENSGT00940000154494.b #14	ENSGT00940000157041.a #15	ENSGT00530000063853.a.b #16	ENSGT00510000047791 #17	ENSGT00510000047030 #18	ENSGT00390000006585 #19	ENSGT00390000003044 #20	ENSGT00390000018598 #21	ENSGT00940000158257 #22	ENSGT00940000163363.e.b.e.a	ENSGT00940000156501 #23	ENSGT00940000153866.B #25	ENSGT00950000183211.a.a.b #26	ENSGT00390000004877 #27	ENSGT00940000156672 #29	ENSGT00940000153717.b #30	ENSGT00940000163363.e.a.b.e.a.b	ENSGT00940000163363.e.a.b.e.a.a	ENSGT00940000163363.e.a.b.e.b.a	ENSGT00940000166017	ENSGT00940000157335	ENSGT00940000153348.A	ENSGT00940000156469	ENSGT00940000160021
Elapidae	ANCESTRAL SPECIES	17	ENSGT00940000153875.d.b.p #35	ENSGT00940000159191 #34	ENSGT00390000008139	ENSGT00940000160637	ENSGT00940000159455	ENSGT00940000156252.d	ENSGT01030000234613.a.b	ENSGT00940000154494.b #14	ENSGT00940000157041.a #15	ENSGT00530000063853.a.b.e.a #16	ENSGT00510000047791 #17	ENSGT00510000047030 #18	ENSGT00390000006585 #19	ENSGT00390000003044 #20	ENSGT00390000018598 #21	ENSGT00940000158257 #22	ENSGT00940000163363.e.b.e.a.a.b	ENSGT00940000163363.e.b.e.a.a.a	ENSGT00940000156501 #23	ENSGT00940000153866.B #25	ENSGT00950000183211.a.a.b #26	ENSGT00390000004877 #27	ENSGT00940000156672 #29	ENSGT00940000153717.b #30	ENSGT00940000163363.e.a.b.e.a.b	ENSGT00940000163363.e.a.b.e.a.a.a	ENSGT00940000163363.e.a.b.e.a.a.b.b	ENSGT00940000163363.e.a.b.e.a.a.b.a	ENSGT00940000163363.e.a.b.e.b.a	ENSGT00940000166017	ENSGT00940000157335
Indian cobra	MODERN SPECIES	12	ZDHHC1 (ENSNNAG00000013515) #34	TMEM208 (ENSNNAG00000013539)	ENSNNAG00000013558	ELMO3 (ENSNNAG00000013593)	E2F4 (ENSNNAG00000013662)	EXOC3L1 (ENSNNAG00000013704)	CTRL (ENSNNAG00000013758) #14	ENSNNAG00000013769 #15	PSKH1 (ENSNNAG00000013781) #15	NRN1L (ENSNNAG00000013787) #16	EDC4 (ENSNNAG00000013835) #17	NUTF2 (ENSNNAG00000014714) #18	THAP11 (ENSNNAG00000014739) #19	ENSNNAG00000014768 #20	ENSNNAG00000015074	RANBP10 (ENSNNAG00000015093) #22	ENSNNAG00000015143	ENSNNAG00000015178	GFOD2 (ENSNNAG00000015201) #23	ENKD1 (ENSNNAG00000015215) #25	PARD6A (ENSNNAG00000015233) #26	ENSNNAG00000015246 #27	CTCF (ENSNNAG00000015299) #29	RIPOR1 (ENSNNAG00000015328) #30	ENSNNAG00000015479	ENSNNAG00000015500	ENSNNAG00000015526	ENSNNAG00000015543	ENSNNAG00000015599	ENSNNAG00000015622	AARS1 (ENSNNAG00000015672)
Elapidae_a	ANCESTRAL SPECIES	28	ENSGT00940000159191 #34	ENSGT00390000008139	ENSGT00940000160637	ENSGT00940000159455	ENSGT00940000156252.d	ENSGT01030000234613.a.b	ENSGT00950000182966.A	ENSGT00940000154494.b #14	ENSGT00940000157041.a #15	ENSGT00530000063853.a.b.e.a #16	ENSGT00510000047791 #17	ENSGT00510000047030 #18	ENSGT00390000006585 #19	ENSGT00390000003044 #20	ENSGT00390000018598 #21	ENSGT00940000158257 #22	ENSGT00940000156501 #23	ENSGT00940000153866.B #25	ENSGT00950000183211.a.a.b #26	ENSGT00390000004877 #27	ENSGT00970000197723	ENSGT00940000156672 #29	ENSGT00940000153717.b #30	ENSGT00940000163363.e.a.b.e.a.b	ENSGT00940000163363.e.a.b.e.a.a.a	ENSGT00940000163363.e.a.b.e.a.a.b.b	ENSGT00940000163363.e.a.b.e.a.a.b.a	ENSGT00940000163363.e.a.b.e.b.a	ENSGT00940000166017	ENSGT00940000157335	ENSGT00940000153348.A
Acanthophiinae	ANCESTRAL SPECIES	26	ENSGT00940000153875.d.b.p #35	ENSGT00940000159191 #34	ENSGT00390000008139	ENSGT00940000160637	ENSGT00940000159455	ENSGT00940000156252.d.a.b	ENSGT01030000234613.a.b	ENSGT00950000182966.A	ENSGT00940000154494.b #14	ENSGT00940000157041.a #15	ENSGT00530000063853.a.b.e.a #16	ENSGT00510000047791 #17	ENSGT00510000047030 #18	ENSGT00390000006585 #19	ENSGT00390000018598 #21	ENSGT00940000158257 #22	ENSGT00940000156501 #23	ENSGT00940000153866.B #25	ENSGT00950000183211.a.a.b.b #26	ENSGT00940000156672 #29	ENSGT00940000153717.b #30	ENSGT00940000163363.e.a.b.e.a.b	ENSGT00940000163363.e.a.b.e.a.a.a	ENSGT00940000163363.e.a.b.e.a.a.b.b	ENSGT00940000163363.e.a.b.e.a.a.b.a	ENSGT00940000163363.e.a.b.e.b.a	ENSGT00940000166017	ENSGT00940000157335	ENSGT00940000153348.A	ENSGT00940000156469	ENSGT00940000160021
Mainland tiger snake	DUPLICATION
Mainland tiger snake	DUPLICATION
Mainland tiger snake	MODERN SPECIES	41	ZDHHC1 (ENSNSUG00000009778) #34	TMEM208 (ENSNSUG00000009777)	ENSNSUG00000009776	ELMO3 (ENSNSUG00000009512)	E2F4 (ENSNSUG00000009511)	ENSNSUG00000009510	ENSNSUG00000009509	ENSNSUG00000009508	PSKH1 (ENSNSUG00000009507) #15	NRN1L (ENSNSUG00000009506) #16	EDC4 (ENSNSUG00000009493) #17	ENSNSUG00000009489 #19	TSNAXIP1 (ENSNSUG00000009485) #21	ENSNSUG00000009483 #22	ENSNSUG00000009482 #22	ENSNSUG00000009481 #22	ENSNSUG00000009480	ENSNSUG00000009479	ENSNSUG00000009478
Mainland tiger snake	MODERN SPECIES	41	RRAD (ENSNSUG00000009780)	ZDHHC1 (ENSNSUG00000009778) #34	TMEM208 (ENSNSUG00000009777)	ENSNSUG00000009776	ELMO3 (ENSNSUG00000009512)	E2F4 (ENSNSUG00000009511)	ENSNSUG00000009510	ENSNSUG00000009509	ENSNSUG00000009508	PSKH1 (ENSNSUG00000009507) #15	NRN1L (ENSNSUG00000009506) #16	EDC4 (ENSNSUG00000009493) #17	ENSNSUG00000009489 #19	TSNAXIP1 (ENSNSUG00000009485) #21	ENSNSUG00000009483 #22	ENSNSUG00000009482 #22	ENSNSUG00000009481 #22	ENSNSUG00000009480	ENSNSUG00000009479	ENSNSUG00000009478
Mainland tiger snake	MODERN SPECIES	41	PDP2 (ENSNSUG00000009783)	RRAD (ENSNSUG00000009780)	ZDHHC1 (ENSNSUG00000009778) #34	TMEM208 (ENSNSUG00000009777)	ENSNSUG00000009776	ELMO3 (ENSNSUG00000009512)	E2F4 (ENSNSUG00000009511)	ENSNSUG00000009510	ENSNSUG00000009509	ENSNSUG00000009508	PSKH1 (ENSNSUG00000009507) #15	NRN1L (ENSNSUG00000009506) #16	EDC4 (ENSNSUG00000009493) #17	ENSNSUG00000009489 #19	TSNAXIP1 (ENSNSUG00000009485) #21	ENSNSUG00000009483 #22	ENSNSUG00000009482 #22	ENSNSUG00000009481 #22	ENSNSUG00000009480	ENSNSUG00000009479	ENSNSUG00000009478
Eastern brown snake	DUPLICATION
Eastern brown snake	MODERN SPECIES	119	ENSPTXG00000018186 #34	ENSPTXG00000018187	ENSPTXG00000018188	ENSPTXG00000018189	ENSPTXG00000018190	ENSPTXG00000018191	ENSPTXG00000018192	ENSPTXG00000018193	ENSPTXG00000018194 #14	ENSPTXG00000018195 #15	ENSPTXG00000018196 #16	ENSPTXG00000018197 #17	ENSPTXG00000018198 #18	THAP11 (ENSPTXG00000018199) #19	ENSPTXG00000018200 #21	ENSPTXG00000018201 #22	ENSPTXG00000018202 #23	ENSPTXG00000018203 #23	ENSPTXG00000018204 #25	ENSPTXG00000018205 #26	ENSPTXG00000018206 #29	ENSPTXG00000018207 #30	ENSPTXG00000018208	ENSPTXG00000018209	ENSPTXG00000018210	ENSPTXG00000018211	ENSPTXG00000018212	ENSPTXG00000018213	ENSPTXG00000018214	ENSPTXG00000018215	ENSPTXG00000018216
Eastern brown snake	MODERN SPECIES	120	ENSPTXG00000008017 #35	ENSPTXG00000008018 #34	ENSPTXG00000008019	ENSPTXG00000008021	ENSPTXG00000008039	ENSPTXG00000008044	ENSPTXG00000008045	ENSPTXG00000008047	ENSPTXG00000008050 #14	ENSPTXG00000008053 #15	ENSPTXG00000008055 #16	ENSPTXG00000008057 #17	ENSPTXG00000008059 #18	ENSPTXG00000008060	ENSPTXG00000008061 #21	ENSPTXG00000008069 #22	ENSPTXG00000008087 #23	ENSPTXG00000008089 #25	ENSPTXG00000008091 #26	ENSPTXG00000008093 #29	ENSPTXG00000008116 #30	ENSPTXG00000008182	ENSPTXG00000008199	ENSPTXG00000008203	ENSPTXG00000008206	ENSPTXG00000008208	ENSPTXG00000008209	ENSPTXG00000008210	ENSPTXG00000008212	ENSPTXG00000008214	ENSPTXG00000008216
Blue-lipped sea krait	MODERN SPECIES	3129							ENSLLTG00000017808	ENSLLTG00000017810	PSKH1 (ENSLLTG00000017811) #15	NRN1L (ENSLLTG00000017813) #16	EDC4 (ENSLLTG00000017815) #17	NUTF2 (ENSLLTG00000017818) #18	THAP11 (ENSLLTG00000017819) #19	ENSLLTG00000017821 #20	TSNAXIP1 (ENSLLTG00000017825) #21	RANBP10 (ENSLLTG00000017828) #22	ENSLLTG00000017832	ENSLLTG00000017836	GFOD2 (ENSLLTG00000017841) #23
Lizard	MODERN SPECIES	909	ENSACAG00000002334 #34	TMEM208 (ENSACAG00000002308)	ENSACAG00000002306	ELMO3 (ENSACAG00000001972)	ENSACAG00000040320	E2F4 (ENSACAG00000028484)	EXOC3L1 (ENSACAG00000001844)	CTRL (ENSACAG00000001737) #14	PSKH1 (ENSACAG00000001729) #15	NRN1L (ENSACAG00000035762) #16	EDC4 (ENSACAG00000001561) #17	NUTF2 (ENSACAG00000043331) #18	THAP11 (ENSACAG00000001520) #19	ENSACAG00000001517 #20	TSNAXIP1 (ENSACAG00000001464) #21	RANBP10 (ENSACAG00000001369) #22	GFOD2 (ENSACAG00000040699) #23	ENSACAG00000001332	PARD6A (ENSACAG00000001298) #26	CTCF (ENSACAG00000001050) #29	RIPOR1 (ENSACAG00000000866) #30	ENSACAG00000039226	ENSACAG00000038266	ENSACAG00000038465	ENSACAG00000036135	ENSACAG00000035816	ENSACAG00000003065	ENSACAG00000043107	ENSACAG00000002808	ENSACAG00000002802	ENSACAG00000002568
tuatara	MODERN SPECIES	755											LCAT (ENSSPUG00000003008) #12	NUTF2 (ENSSPUG00000002988) #18	ENSSPUG00000002981	ENSSPUG00000002970 #20	TSNAXIP1 (ENSSPUG00000002851) #21	RANBP10 (ENSSPUG00000002829) #22	ENSSPUG00000002817 #23	ENSSPUG00000002812 #23	ENKD1 (ENSSPUG00000002802) #25	PARD6A (ENSSPUG00000002775) #26
Archelosauria	ANCESTRAL SPECIES	50	ENSGT00390000008139	ENSGT00940000160637	ENSGT00940000159455	ENSGT00940000156252	ENSGT01030000234613.a.b	ENSGT00940000154494.b #14	ENSGT00940000157041.a #15	ENSGT00530000063853.a.b #16	ENSGT00510000047791 #17	ENSGT00510000047030 #18	ENSGT00390000006585 #19	ENSGT00390000003044 #20	ENSGT00940000165060	ENSGT00990000212499	ENSGT00390000018598 #21	ENSGT00940000158257 #22	ENSGT00940000156501 #23	ENSGT00940000153866.B #25	ENSGT00950000183211.a.a.b #26
Cryptodira	ANCESTRAL SPECIES	14	ENSGT00390000004417.b	ENSGT00390000008139	ENSGT00940000160637	ENSGT00940000159455	ENSGT00940000156252	ENSGT01030000234613.a.b	ENSGT00940000154494.b #14	ENSGT00940000157041.a #15	ENSGT00530000063853.a.b #16	ENSGT00510000047791 #17	ENSGT00510000047030 #18	ENSGT00390000003044 #20	ENSGT00940000165060	ENSGT00990000212499	ENSGT00390000018598 #21	ENSGT00940000158257 #22	ENSGT00940000156501 #23	ENSGT00940000153866.B #25	ENSGT00950000183211.a.a.b #26
Testudinoidea	ANCESTRAL SPECIES	13	ENSGT00390000008139.k	ENSGT00940000160637	ENSGT00940000159455	ENSGT00940000156252	ENSGT01030000234613.a.b	ENSGT00940000154494.b #14	ENSGT00940000157041.a #15	ENSGT00530000063853.a.b #16	ENSGT00510000047791 #17	ENSGT00510000047030 #18	ENSGT00390000003044.i #20	ENSGT00940000165060	ENSGT00990000212499	ENSGT00390000003044.j #20	ENSGT00390000018598 #21	ENSGT00940000158257 #22	ENSGT00940000156501 #23	ENSGT00940000153866.B #25	ENSGT00950000183211.a.a.b #26	ENSGT00940000168336	ENSGT00950000183151.a.a.b	ENSGT00940000154065.a	ENSGT00390000002251	ENSGT00940000156356	ENSGT00940000157335	ENSGT00940000153348.A	ENSGT00940000167814	ENSGT00900000141128	ENSGT00940000165483	ENSGT00950000183156.a.b.b.a	ENSGT00390000008385
Testudinidae	ANCESTRAL SPECIES	17	ENSGT00390000004417.b	ENSGT00390000008139.k	ENSGT00940000160637	ENSGT00940000159455	ENSGT00940000156252	ENSGT01030000234613.a.b	ENSGT00940000154494.b #14	ENSGT00940000157041.a #15	ENSGT00530000063853.a.b #16	ENSGT00510000047791 #17	ENSGT00510000047030 #18	ENSGT00390000003044.i #20	ENSGT00390000003044.j #20	ENSGT00940000165060	ENSGT00990000212499	ENSGT00940000158257 #22	ENSGT00940000156501 #23	ENSGT00940000153866.B #25	ENSGT00950000183211.a.a.b #26	ENSGT00940000168336	ENSGT00950000183151.a.a.b	ENSGT00940000154065.a	ENSGT00390000002251	ENSGT00940000156356	ENSGT00940000157335	ENSGT00940000153348.A	ENSGT00940000167814	ENSGT00900000141128	ENSGT00940000165483	ENSGT00950000183156.a.b.b.a	ENSGT00390000008385
Goode s thornscrub tortoise	MODERN SPECIES	3	ENSGEVG00005004754	LCAT (ENSGEVG00005004719) #12	MATCAP1 (ENSGEVG00005004672)	TMEM208 (ENSGEVG00005004643)	ENSGEVG00005004626	ELMO3 (ENSGEVG00005004591)	E2F4 (ENSGEVG00005004542)	EXOC3L1 (ENSGEVG00005004462)	PSKH1 (ENSGEVG00005004407) #15	NRN1L (ENSGEVG00005004361) #16	EDC4 (ENSGEVG00005004310) #17	NUTF2 (ENSGEVG00005004279) #18	ENSGEVG00005004251 #20	ENSGEVG00005004224	ENSGEVG00005004200	RANBP10 (ENSGEVG00005004172) #22	ENSGEVG00005004147 #23	ENSGEVG00005004134 #23	ENKD1 (ENSGEVG00005004118) #25	PARD6A (ENSGEVG00005018443) #26	ENSGEVG00005018393	SF3B3 (ENSGEVG00005018288)	COG4 (ENSGEVG00005018197)	FCSK (ENSGEVG00005018093)	ST3GAL2 (ENSGEVG00005018064)	AARS1 (ENSGEVG00005017984)	EXOSC6 (ENSGEVG00005017960)	ENSGEVG00005017942	ENSGEVG00005017850	MTSS2 (ENSGEVG00005017782)	VAC14 (ENSGEVG00005017729)
Abingdon island giant tortoise	MODERN SPECIES	1005																RANBP10 (ENSCABG00000015017) #22	GFOD2 (ENSCABG00000015016) #23
Emydidae	ANCESTRAL SPECIES	33	ENSGT00940000155365.b	ENSGT00940000160052 #12	ENSGT00390000004417.b	ENSGT00390000008139.k	ENSGT00940000160637	ENSGT00940000159455	ENSGT00940000156252	ENSGT01030000234613.a.b	ENSGT00940000154494.b #14	ENSGT00940000157041.a #15	ENSGT00530000063853.a.b #16	ENSGT00510000047791 #17	ENSGT00510000047030 #18	ENSGT00390000003044.i #20	ENSGT00390000018598 #21	ENSGT00940000158257 #22	ENSGT00940000156501 #23	ENSGT00940000153866.B #25	ENSGT00950000183211.a.a.b #26	ENSGT00940000168336	ENSGT00950000183151.a.a.b	ENSGT00940000154065.a	ENSGT00390000002251	ENSGT00940000156356	ENSGT00940000157335	ENSGT00940000167814	ENSGT00900000141128	ENSGT00940000165483	ENSGT00950000183156.a.b.b.a	ENSGT00390000008385	ENSGT00940000163228
Three-toed box turtle	DUPLICATION
Three-toed box turtle	MODERN SPECIES	74	ENSTMTG00000005093 #12	ENSTMTG00000005148	ENSTMTG00000005166	ENSTMTG00000005180	ENSTMTG00000005206	ENSTMTG00000005315	ENSTMTG00000005351	ENSTMTG00000005375	ENSTMTG00000005442 #14	ENSTMTG00000005461 #15	ENSTMTG00000005470 #16	ENSTMTG00000005571 #17	ENSTMTG00000006846 #18	ENSTMTG00000006863 #20	ENSTMTG00000006931 #21	ENSTMTG00000006979 #22	ENSTMTG00000007023 #23	ENSTMTG00000007027 #23	ENSTMTG00000007034 #25	ENSTMTG00000007071 #26	ENSTMTG00000007118	ENSTMTG00000007136	ENSTMTG00000007205	ENSTMTG00000007354	ENSTMTG00000008681	ENSTMTG00000008731	ENSTMTG00000008906	ENSTMTG00000008926	ENSTMTG00000008961	ENSTMTG00000008977	ENSTMTG00000009065
Three-toed box turtle	MODERN SPECIES	73	ENSTMTG00000013361	ENSTMTG00000013366 #12	ENSTMTG00000013377	ENSTMTG00000013416	ENSTMTG00000013445	ENSTMTG00000013562	ENSTMTG00000014492	ENSTMTG00000014511	ENSTMTG00000014554 #14	ENSTMTG00000014567 #15	ENSTMTG00000014576 #16	ENSTMTG00000014668 #17	ENSTMTG00000015624 #18	ENSTMTG00000015640 #20	ENSTMTG00000015672 #21	ENSTMTG00000015726 #22	ENSTMTG00000015946 #23	ENSTMTG00000015957 #23	ENSTMTG00000015964 #25	ENSTMTG00000015978 #26	ENSTMTG00000016035	ENSTMTG00000016087	ENSTMTG00000016201	ENSTMTG00000016278	ENSTMTG00000016330	ENSTMTG00000016344	ENSTMTG00000016386	ENSTMTG00000016403	ENSTMTG00000016432	ENSTMTG00000016461	ENSTMTG00000016636
painted turtle	MODERN SPECIES	932	ENSCPBG00000015629 #31	ENSCPBG00000015631	LCAT (ENSCPBG00000015633) #12	MATCAP1 (ENSCPBG00000015636)	TMEM208 (ENSCPBG00000015638)	ENSCPBG00000015644	ELMO3 (ENSCPBG00000015646)	E2F4 (ENSCPBG00000015647)	CTRL (ENSCPBG00000015649) #14	PSKH1 (ENSCPBG00000015651) #15	NRN1L (ENSCPBG00000015652) #16	EDC4 (ENSCPBG00000015685) #17	NUTF2 (ENSCPBG00000015840) #18	ENSCPBG00000015842 #20	ENSCPBG00000015844	RANBP10 (ENSCPBG00000015845) #22	GFOD2 (ENSCPBG00000015847) #23	ENKD1 (ENSCPBG00000015849) #25	PARD6A (ENSCPBG00000015850) #26	ENSCPBG00000015852	SF3B3 (ENSCPBG00000015853)	ENSCPBG00000015857	COG4 (ENSCPBG00000015859)	FCSK (ENSCPBG00000015867)
Chinese turtle	MODERN SPECIES	1440						LCAT (ENSPSIG00000009855) #12	MATCAP1 (ENSPSIG00000009787)	TMEM208 (ENSPSIG00000009628)	ENSPSIG00000001772	E2F4 (ENSPSIG00000009614)	PSKH1 (ENSPSIG00000009319) #15	EDC4 (ENSPSIG00000009211) #17	NUTF2 (ENSPSIG00000008982) #18	ENSPSIG00000008716 #20	ENSPSIG00000008199	RANBP10 (ENSPSIG00000007615) #22	GFOD2 (ENSPSIG00000007597) #23	ENKD1 (ENSPSIG00000007590) #25	PARD6A (ENSPSIG00000007537) #26	TPPP3 (ENSPSIG00000007372) #35	ZDHHC1 (ENSPSIG00000006764) #34	SLC38A7 (ENSPSIG00000006052)	CNOT1 (ENSPSIG00000005499)	SETD6 (ENSPSIG00000005364)	NDRG4 (ENSPSIG00000004943)	GINS3 (ENSPSIG00000004900)	ENSPSIG00000004852	PRSS54 (ENSPSIG00000004764)	CCDC113 (ENSPSIG00000004709)	ENSPSIG00000001769	CSNK2A2 (ENSPSIG00000004450)
Archosauria	ANCESTRAL SPECIES	65	ENSGT00940000160052 #12	ENSGT00390000004417.b	ENSGT00390000008139	ENSGT00940000159455	ENSGT00940000156252	ENSGT01030000234613.a.b	ENSGT00940000154494.b #14	ENSGT00940000157041.a #15	ENSGT00530000063853.a.b #16	ENSGT00510000047791 #17	ENSGT00510000047030 #18	ENSGT00390000006585 #19	ENSGT00390000003044 #20	ENSGT00940000165060	ENSGT00990000212499	ENSGT00940000158257 #22	ENSGT00940000156501 #23	ENSGT00940000153866.B #25	ENSGT00950000183211.a.a.b #26
Australian saltwater crocodile	DUPLICATION
Australian saltwater crocodile	MODERN SPECIES	35	DRC7 (ENSCPRG00005015311)	ENSCPRG00005015330	ADGRG3 (ENSCPRG00005015336)	ADGRG1 (ENSCPRG00005015343)	CCDC102A (ENSCPRG00005015349)	DOK4 (ENSCPRG00005015352)	POLR2C (ENSCPRG00005015356)	COQ9 (ENSCPRG00005015362)	CIAPIN1 (ENSCPRG00005015366)	ENSCPRG00005015379	NUTF2 (ENSCPRG00005015425) #18	EDC4 (ENSCPRG00005015510) #17	NRN1L (ENSCPRG00005015858) #16	ENSCPRG00005000064	ENSCPRG00005000079	ENSCPRG00005000103 #22	ENSCPRG00005000109 #22	ENSCPRG00005000115 #23	ENSCPRG00005000121 #23	ENKD1 (ENSCPRG00005000122) #25	PARD6A (ENSCPRG00005000125) #26	ENSCPRG00005000182	ENSCPRG00005000307	AARS1 (ENSCPRG00005000331)	RIPOR1 (ENSCPRG00005000408) #30	CTCF (ENSCPRG00005000477) #29	ENSCPRG00005000497 #27	CNOT1 (ENSCPRG00005000725)	ENSCPRG00005001622	ENSCPRG00005001625	SLC38A7 (ENSCPRG00005001630)
Australian saltwater crocodile	MODERN SPECIES	35	ENSCPRG00005015330	ADGRG3 (ENSCPRG00005015336)	ADGRG1 (ENSCPRG00005015343)	CCDC102A (ENSCPRG00005015349)	DOK4 (ENSCPRG00005015352)	POLR2C (ENSCPRG00005015356)	COQ9 (ENSCPRG00005015362)	CIAPIN1 (ENSCPRG00005015366)	ENSCPRG00005015379	NUTF2 (ENSCPRG00005015425) #18	EDC4 (ENSCPRG00005015510) #17	NRN1L (ENSCPRG00005015858) #16	ENSCPRG00005000064	ENSCPRG00005000079	ENSCPRG00005000103 #22	ENSCPRG00005000109 #22	ENSCPRG00005000115 #23	ENSCPRG00005000121 #23	ENKD1 (ENSCPRG00005000122) #25	PARD6A (ENSCPRG00005000125) #26	ENSCPRG00005000182	ENSCPRG00005000307	AARS1 (ENSCPRG00005000331)	RIPOR1 (ENSCPRG00005000408) #30	CTCF (ENSCPRG00005000477) #29	ENSCPRG00005000497 #27	CNOT1 (ENSCPRG00005000725)	ENSCPRG00005001622	ENSCPRG00005001625	SLC38A7 (ENSCPRG00005001630)	GOT2 (ENSCPRG00005001636)
Aves	ANCESTRAL SPECIES	67	ENSGT00940000160052 #12	ENSGT00390000004417.b	ENSGT00390000008139	ENSGT00940000159455	ENSGT00940000156252	ENSGT01030000234613.a.b	ENSGT00940000154494.b #14	ENSGT00940000157041.a #15	ENSGT00530000063853.a.b #16	ENSGT00510000047791 #17	ENSGT00510000047030 #18	ENSGT00390000006585 #19	ENSGT00390000003044 #20	ENSGT00940000165060	ENSGT00990000212499	ENSGT00940000158257 #22
African ostrich	MODERN SPECIES	209			LCAT (ENSSCUG00000002869) #12	MATCAP1 (ENSSCUG00000002872)	TMEM208 (ENSSCUG00000002874)	ELMO3 (ENSSCUG00000002877)	E2F4 (ENSSCUG00000002882)	EXOC3L1 (ENSSCUG00000002884)	PSKH1 (ENSSCUG00000002888) #15	NRN1L (ENSSCUG00000002889) #16	EDC4 (ENSSCUG00000002898) #17	NUTF2 (ENSSCUG00000002921) #18	ENSSCUG00000002923 #20	ENSSCUG00000002927	ENSSCUG00000002928	RANBP10 (ENSSCUG00000002930) #22
Neognathae	ANCESTRAL SPECIES	13	ENSGT00940000163363.e.a.b.c.b	ENSGT00940000160052 #12	ENSGT00390000004417.b	ENSGT00390000008139	ENSGT00940000159455	ENSGT00940000156252	ENSGT01030000234613.a.b	ENSGT00940000154494.b #14	ENSGT00940000157041.a #15	ENSGT00530000063853.a.b #16	ENSGT00510000047791 #17	ENSGT00510000047030 #18	ENSGT00390000006585 #19	ENSGT00390000003044 #20	ENSGT00940000165060	ENSGT00940000158257 #22	ENSGT00990000204304	ENSGT01030000235537	ENSGT00940000156011	ENSGT00390000015052.j	ENSGT00940000157894	ENSGT00500000044916	ENSGT00940000157653	ENSGT00940000160652	ENSGT01100000263545.a.b.d.a	ENSGT00390000017671.b	ENSGT00950000183211.a.a.b #26	ENSGT00940000153866.B #25	ENSGT00940000156501 #23	ENSGT00390000011417	ENSGT00390000009328
Neognathae_b	ANCESTRAL SPECIES	15	ENSGT00940000163363.e.a.b.c.a	ENSGT00940000160052 #12	ENSGT00390000004417.b	ENSGT00390000008139	ENSGT00940000159455	ENSGT00940000156252	ENSGT01030000234613.a.b	ENSGT00940000154494.b #14	ENSGT00940000157041.a #15	ENSGT00530000063853.a.b #16	ENSGT00510000047791 #17	ENSGT00510000047030 #18	ENSGT00390000006585 #19	ENSGT00390000003044 #20	ENSGT00940000165060	ENSGT00940000158257 #22	ENSGT01040000241829	ENSGT01030000235537	ENSGT00940000156011	ENSGT00390000015052.j	ENSGT00940000157894	ENSGT00500000044916	ENSGT00940000157653	ENSGT00940000160652	ENSGT01100000263545.a.b.d.a	ENSGT00390000017671.b	ENSGT00950000183211.a.a.b #26	ENSGT00940000153866.B #25	ENSGT00940000156501 #23	ENSGT00390000011417	ENSGT00390000009328
Neognathae_c	ANCESTRAL SPECIES	18	ENSGT00940000163363.e.a.b.c.a	ENSGT00940000160052 #12	ENSGT00390000004417.b	ENSGT00390000008139	ENSGT00940000159455	ENSGT00940000156252	ENSGT01030000234613.a.b	ENSGT00940000154494.b #14	ENSGT00940000157041.a #15	ENSGT00530000063853.a.b #16	ENSGT00510000047791 #17	ENSGT00510000047030 #18	ENSGT00390000006585 #19	ENSGT00390000003044 #20	ENSGT00940000165060	ENSGT00940000158257 #22	ENSGT01040000241829	ENSGT01030000235537	ENSGT00940000156011	ENSGT00390000015052.j	ENSGT00940000157894	ENSGT00500000044916	ENSGT00940000157653	ENSGT00940000160652	ENSGT01100000263545.a.b.d.a	ENSGT00390000017671.b	ENSGT00950000183211.a.a.b #26	ENSGT00940000153866.B #25	ENSGT00940000156501 #23	ENSGT00390000011417	ENSGT00390000009328
Kakapo	DUPLICATION
Kakapo	MODERN SPECIES	19	ZBTB5 (ENSSHBG00005002578)	POLR1E (ENSSHBG00005002568)	FBXO10 (ENSSHBG00005002544)	ENSSHBG00005002530	DCAF10 (ENSSHBG00005002516)	ENSSHBG00005002505	TRMT10B (ENSSHBG00005002491)	FRMPD1 (ENSSHBG00005002476)	TOMM5 (ENSSHBG00005002462)	ENSSHBG00005002452	EMC4 (ENSSHBG00005002444)	RIOK2 (ENSSHBG00005002429)	RGMB (ENSSHBG00005002380)	ENSSHBG00005002143	ENSSHBG00005001831	ENSSHBG00005001712 #22	ENSSHBG00005001690	PLLP (ENSSHBG00005001663)	ENSSHBG00005001647	ENSSHBG00005001618	ENSSHBG00005001573	CPNE2 (ENSSHBG00005001547)	CETP (ENSSHBG00005001455)	ENSSHBG00005001387	ENSSHBG00005000151 #26	ENKD1 (ENSSHBG00005003663) #25	GFOD2 (ENSSHBG00005003655) #23	ENSSHBG00005003646	COQ9 (ENSSHBG00005003629)	POLR2C (ENSSHBG00005003604)	DOK4 (ENSSHBG00005003571)
Kakapo	MODERN SPECIES	4	ENSSHBG00005000067	ENSSHBG00005000059	ENSSHBG00005000057	ENSSHBG00005000042	ENSSHBG00005000034	ENSSHBG00005000016	ENSSHBG00005019748	ENSSHBG00005019731	ENSSHBG00005019719	ENSSHBG00005019712	ENSSHBG00005019703	ENSSHBG00005019698 #19	ENSSHBG00005019695 #18	ENSSHBG00005019162 #17	ENSSHBG00005019101	ENSSHBG00005019095 #22
Golden eagle	MODERN SPECIES	25	ENSACCG00020003787	LCAT (ENSACCG00020003807) #12	MATCAP1 (ENSACCG00020007867)	TMEM208 (ENSACCG00020007881)	ELMO3 (ENSACCG00020007906)	E2F4 (ENSACCG00020007936)	EXOC3L1 (ENSACCG00020007949)	CTRL (ENSACCG00020007972) #14	PSKH1 (ENSACCG00020007994) #15	NRN1L (ENSACCG00020008004) #16	EDC4 (ENSACCG00020008019) #17	NUTF2 (ENSACCG00020008042) #18	ENSACCG00020008051	CENPT (ENSACCG00020008059) #20	ENSACCG00020008068	RANBP10 (ENSACCG00020008087) #22	ENSACCG00020008096	ENSACCG00020008105	ENSACCG00020008110	PLLP (ENSACCG00020008120)	ARL2BP (ENSACCG00020008127)	RSPRY1 (ENSACCG00020008134)	PSME3IP1 (ENSACCG00020008144)	CPNE2 (ENSACCG00020008151)	NLRC5 (ENSACCG00020008163)	CETP (ENSACCG00020008186)	HERPUD1 (ENSACCG00020008207)	PARD6A (ENSACCG00020008225) #26	ENKD1 (ENSACCG00020008233) #25	GFOD2 (ENSACCG00020008241) #23	CIAPIN1 (ENSACCG00020008255)
Passeriformes	ANCESTRAL SPECIES	13	ENSGT00390000011417	ENSGT00940000156501 #23	ENSGT00940000153866.B #25	ENSGT00950000183211.a.a.b #26	ENSGT00390000017671.b	ENSGT01100000263545.a.b.d.a	ENSGT00940000160652	ENSGT00940000157653	ENSGT00500000044916	ENSGT00940000157894	ENSGT00390000015052.j	ENSGT00940000156011	ENSGT00960000189770	ENSGT00390000006585 #19	ENSGT00390000003044 #20	ENSGT00940000158257 #22	ENSGT00990000204304	ENSGT01030000235537	ENSGT00510000047030 #18	ENSGT00510000047791 #17	ENSGT00530000063853.a.b #16	ENSGT00940000157041.a #15	ENSGT00940000154494.b #14	ENSGT01030000234613.a.b	ENSGT00940000156252	ENSGT00940000159455	ENSGT00390000008139	ENSGT00390000004417.b	ENSGT00940000160052 #12	ENSGT00940000163363.e.a.b.c.a.e	ENSGT00940000163363.e.a.b.c.a.f
Great tit	MODERN SPECIES	2	POLR2C (ENSPMJG00000014063)	COQ9 (ENSPMJG00000014065)	CIAPIN1 (ENSPMJG00000014068)	GFOD2 (ENSPMJG00000014071) #23	PARD6A (ENSPMJG00000014072) #26	HERPUD1 (ENSPMJG00000014073)	CETP (ENSPMJG00000014074)	NLRC5 (ENSPMJG00000014080)	CPNE2 (ENSPMJG00000014095)	PSME3IP1 (ENSPMJG00000014109)	RSPRY1 (ENSPMJG00000014116)	ARL2BP (ENSPMJG00000014117)	PLLP (ENSPMJG00000014118)	ENSPMJG00000014120	ENSPMJG00000014121 #20	RANBP10 (ENSPMJG00000014123) #22	ENSPMJG00000014127	ENSPMJG00000014129	NUTF2 (ENSPMJG00000014133) #18	ENSPMJG00000014135	EDC4 (ENSPMJG00000014136) #17	NRN1L (ENSPMJG00000014137) #16	PSKH1 (ENSPMJG00000014140) #15	CTRL (ENSPMJG00000014141) #14	EXOC3L1 (ENSPMJG00000014144)	E2F4 (ENSPMJG00000014168)	ELMO3 (ENSPMJG00000014170)	TMEM208 (ENSPMJG00000014181)	LCAT (ENSPMJG00000014185) #12	ENSPMJG00000014186	ENSPMJG00000014187
Passeriformes_d	ANCESTRAL SPECIES	13	ENSGT00390000009328	ENSGT00390000011417	ENSGT00940000156501 #23	ENSGT00940000153866.B #25	ENSGT00950000183211.a.a.b #26	ENSGT00390000017671.b	ENSGT01100000263545.a.b.d.a	ENSGT00940000160652	ENSGT00940000157653	ENSGT00500000044916	ENSGT00940000157894	ENSGT00390000015052.j	ENSGT00940000156011	ENSGT00390000006585 #19	ENSGT00390000003044 #20	ENSGT00940000158257 #22	ENSGT01040000241829	ENSGT00990000204304	ENSGT01030000235537	ENSGT00510000047030 #18	ENSGT00510000047791 #17	ENSGT00530000063853.a.b #16	ENSGT00940000157041.a #15	ENSGT00940000154494.b #14	ENSGT01030000234613.a.b	ENSGT00940000156252	ENSGT00940000159455	ENSGT00390000008139	ENSGT00390000004417.b	ENSGT00940000160052 #12	ENSGT00940000163363.e.a.b.c.a.e
Flycatcher	DUPLICATION
Flycatcher	MODERN SPECIES	2	COQ9 (ENSFALG00000006939)	CIAPIN1 (ENSFALG00000006952)	GFOD2 (ENSFALG00000006955) #23	ENSFALG00000006958 #25	PARD6A (ENSFALG00000029061) #26	HERPUD1 (ENSFALG00000006965)	CETP (ENSFALG00000006970)	NLRC5 (ENSFALG00000006980)	CPNE2 (ENSFALG00000007000)	PSME3IP1 (ENSFALG00000007006)	RSPRY1 (ENSFALG00000007009)	ARL2BP (ENSFALG00000007012)	PLLP (ENSFALG00000007017)	THAP11 (ENSFALG00000024324) #19	ENSFALG00000007027 #20	ENSFALG00000027277 #22	ENSFALG00000007031 #22	ENSFALG00000023054	ENSFALG00000023954	ENSFALG00000028922	ENSFALG00000007051	NUTF2 (ENSFALG00000028610) #18	EDC4 (ENSFALG00000007060) #17	PSKH1 (ENSFALG00000007063) #15	CTRL (ENSFALG00000007067) #14	EXOC3L1 (ENSFALG00000007076)	E2F4 (ENSFALG00000007077)	ELMO3 (ENSFALG00000007082)	TMEM208 (ENSFALG00000007048)	ENSFALG00000024408	ENSFALG00000007104 #12
Flycatcher	MODERN SPECIES	2	CIAPIN1 (ENSFALG00000006952)	GFOD2 (ENSFALG00000006955) #23	ENSFALG00000006958 #25	PARD6A (ENSFALG00000029061) #26	HERPUD1 (ENSFALG00000006965)	CETP (ENSFALG00000006970)	NLRC5 (ENSFALG00000006980)	CPNE2 (ENSFALG00000007000)	PSME3IP1 (ENSFALG00000007006)	RSPRY1 (ENSFALG00000007009)	ARL2BP (ENSFALG00000007012)	PLLP (ENSFALG00000007017)	THAP11 (ENSFALG00000024324) #19	ENSFALG00000007027 #20	ENSFALG00000027277 #22	ENSFALG00000007031 #22	ENSFALG00000023054	ENSFALG00000023954	ENSFALG00000028922	ENSFALG00000007051	NUTF2 (ENSFALG00000028610) #18	EDC4 (ENSFALG00000007060) #17	PSKH1 (ENSFALG00000007063) #15	CTRL (ENSFALG00000007067) #14	EXOC3L1 (ENSFALG00000007076)	E2F4 (ENSFALG00000007077)	ELMO3 (ENSFALG00000007082)	TMEM208 (ENSFALG00000007048)	ENSFALG00000024408	ENSFALG00000007104 #12	ENSFALG00000024685
Passeriformes_g	ANCESTRAL SPECIES	17	ENSGT00950000183100.A	ENSGT00390000009328	ENSGT00390000011417	ENSGT00940000156501 #23	ENSGT00940000153866.B #25	ENSGT00950000183211.a.a.b #26	ENSGT00390000017671.b	ENSGT01100000263545.a.b.d.a	ENSGT00940000157653	ENSGT00500000044916	ENSGT00940000157894	ENSGT00390000015052.j	ENSGT00940000156011	ENSGT00390000006585 #19	ENSGT00390000003044 #20	ENSGT00940000158257 #22	ENSGT01040000241829	ENSGT00990000204304	ENSGT01030000235537	ENSGT00510000047030 #18	ENSGT00510000047791 #17	ENSGT00530000063853.a.b #16	ENSGT00940000157041.a #15	ENSGT00940000154494.b #14	ENSGT01030000234613.a.b	ENSGT00940000156252	ENSGT00940000159455	ENSGT00390000008139	ENSGT00390000004417.b	ENSGT00940000160052 #12	ENSGT00940000163363.e.a.b.c.a.e
Medium ground finch	MODERN SPECIES	46	DOK4 (ENSGFOG00000012118)	POLR2C (ENSGFOG00000012112)	COQ9 (ENSGFOG00000012106)	CIAPIN1 (ENSGFOG00000012099)	GFOD2 (ENSGFOG00000012095) #23	ENKD1 (ENSGFOG00000012088) #25	PARD6A (ENSGFOG00000012085) #26	HERPUD1 (ENSGFOG00000012078)	CETP (ENSGFOG00000012065)	CPNE2 (ENSGFOG00000012046)	PSME3IP1 (ENSGFOG00000012040)	RSPRY1 (ENSGFOG00000012036)	ARL2BP (ENSGFOG00000012029)	PLLP (ENSGFOG00000012023)	ENSGFOG00000012016 #20	RANBP10 (ENSGFOG00000012002) #22	ENSGFOG00000011996	ENSGFOG00000011994	ENSGFOG00000011991	NUTF2 (ENSGFOG00000011984) #18	EDC4 (ENSGFOG00000011633) #17	PSKH1 (ENSGFOG00000011543) #15	CTRL (ENSGFOG00000011519) #14	EXOC3L1 (ENSGFOG00000011493)	E2F4 (ENSGFOG00000011476)	ELMO3 (ENSGFOG00000011458)	TMEM208 (ENSGFOG00000011442)	LCAT (ENSGFOG00000011433) #12	ENSGFOG00000011407	ENSGFOG00000011394	ENSGFOG00000011387
Passeroidea	ANCESTRAL SPECIES	17	ENSGT00390000009328	ENSGT00390000011417	ENSGT00940000156501 #23	ENSGT00940000153866.B #25	ENSGT00950000183211.a.a.b #26	ENSGT00390000017671.b	ENSGT01100000263545.a.b.d.a	ENSGT00940000157653	ENSGT00500000044916	ENSGT00940000157894	ENSGT00390000015052.j	ENSGT00940000156011	ENSGT00960000189770	ENSGT00390000006585 #19	ENSGT00390000003044 #20	ENSGT00940000158257 #22	ENSGT01040000241829	ENSGT00990000204304	ENSGT01030000235537	ENSGT00510000047030 #18	ENSGT00510000047791 #17	ENSGT00530000063853.a.b #16	ENSGT00940000157041.a #15	ENSGT00940000154494.b #14	ENSGT01030000234613.a.b	ENSGT00940000156252	ENSGT00940000159455	ENSGT00390000008139	ENSGT00390000004417.b	ENSGT00940000160052 #12	ENSGT00940000163363.e.a.b.c.a.e
Zebra finch	MODERN SPECIES	2	POLR2C (ENSTGUG00000004996)	COQ9 (ENSTGUG00000005018)	CIAPIN1 (ENSTGUG00000005036)	GFOD2 (ENSTGUG00000005053) #23	ENKD1 (ENSTGUG00000005058) #25	PARD6A (ENSTGUG00000005063) #26	HERPUD1 (ENSTGUG00000005066)	CETP (ENSTGUG00000005087)	CPNE2 (ENSTGUG00000005118)	PSME3IP1 (ENSTGUG00000005173)	RSPRY1 (ENSTGUG00000005197)	ARL2BP (ENSTGUG00000005238)	PLLP (ENSTGUG00000005247)	ENSTGUG00000023133	ENSTGUG00000026335 #20	RANBP10 (ENSTGUG00000005262) #22	ENSTGUG00000019972	ENSTGUG00000024320	NUTF2 (ENSTGUG00000028608) #18	EDC4 (ENSTGUG00000005312) #17	NRN1L (ENSTGUG00000022742) #16	PSKH1 (ENSTGUG00000028925) #15	CTRL (ENSTGUG00000005352) #14	EXOC3L1 (ENSTGUG00000005376)	E2F4 (ENSTGUG00000005417)	TMEM208 (ENSTGUG00000005504)	MATCAP1 (ENSTGUG00000005512)	LCAT (ENSTGUG00000005519) #12	ENSTGUG00000005554	ENSTGUG00000005564	RIPOR1 (ENSTGUG00000005594) #30
Common canary	MODERN SPECIES	14	POLR2C (ENSSCAG00000006272)	COQ9 (ENSSCAG00000006264)	CIAPIN1 (ENSSCAG00000006259)	GFOD2 (ENSSCAG00000006255) #23	ENKD1 (ENSSCAG00000006250) #25	PARD6A (ENSSCAG00000006248) #26	HERPUD1 (ENSSCAG00000006241)	CETP (ENSSCAG00000006237)	CPNE2 (ENSSCAG00000006140)	PSME3IP1 (ENSSCAG00000006124)	RSPRY1 (ENSSCAG00000006112)	ARL2BP (ENSSCAG00000006104)	PLLP (ENSSCAG00000006101)	THAP11 (ENSSCAG00000006098) #19	ENSSCAG00000006088 #20	RANBP10 (ENSSCAG00000006066) #22	ENSSCAG00000006055	ENSSCAG00000006050	ENSSCAG00000006045	ENSSCAG00000006043	NUTF2 (ENSSCAG00000006042) #18	EDC4 (ENSSCAG00000006037) #17	PSKH1 (ENSSCAG00000006033) #15	CTRL (ENSSCAG00000006017) #14	EXOC3L1 (ENSSCAG00000006010)	E2F4 (ENSSCAG00000006003)	ELMO3 (ENSSCAG00000005985)	LCAT (ENSSCAG00000005959) #12	ENSSCAG00000005936	ENSSCAG00000005913	ENSSCAG00000005904
Galloanserae	ANCESTRAL SPECIES	12	ENSGT00940000163363.e.a.b.d	ENSGT00940000160052 #12	ENSGT00390000004417.b	ENSGT00390000008139	ENSGT00940000159455	ENSGT00940000156252	ENSGT01030000234613.a.b	ENSGT00940000154494.b #14	ENSGT00940000157041.a #15	ENSGT00530000063853.a.b #16	ENSGT00510000047791 #17	ENSGT00510000047030 #18	ENSGT00390000006585 #19	ENSGT00390000003044 #20	ENSGT00940000165060	ENSGT00940000158257 #22	ENSGT00990000204304	ENSGT01030000235537	ENSGT00940000156011	ENSGT00390000015052.j	ENSGT00940000157894	ENSGT00500000044916	ENSGT00940000157653	ENSGT00940000160652	ENSGT01100000263545.a.b.d.a	ENSGT00390000017671.b	ENSGT00950000183211.a.a.b #26	ENSGT00940000153866.B #25	ENSGT00940000156501 #23	ENSGT00390000011417	ENSGT00390000009328
Anatidae	ANCESTRAL SPECIES	44	ENSGT00940000163363.e.a.b.d	ENSGT00940000160052 #12	ENSGT00390000004417.b	ENSGT00390000008139	ENSGT00940000159455	ENSGT00940000156252	ENSGT01030000234613.a.b	ENSGT00940000154494.b #14	ENSGT00940000157041.a #15	ENSGT00530000063853.a.b #16	ENSGT00510000047791 #17	ENSGT00510000047030 #18	ENSGT00390000006585 #19	ENSGT00390000003044 #20	ENSGT00940000165060	ENSGT00940000158257 #22	ENSGT01030000238340	ENSGT01030000235537	ENSGT00940000156011	ENSGT00390000015052.j	ENSGT00940000157894	ENSGT00500000044916	ENSGT00940000157653	ENSGT00940000160652	ENSGT01100000263545.a.b.d.a	ENSGT00390000017671.b	ENSGT00950000183211.a.a.b #26	ENSGT00940000153866.B #25	ENSGT00940000156501 #23	ENSGT00950000182872.f.b.a	ENSGT00390000001622
Duck	MODERN SPECIES	3	CARMIL2 (ENSAPLG00000007850) #28	CTCF (ENSAPLG00000007458) #29	RIPOR1 (ENSAPLG00000007203) #30	ENSAPLG00000021785	LCAT (ENSAPLG00000006651) #12	MATCAP1 (ENSAPLG00000006640)	TMEM208 (ENSAPLG00000025971)	CTRL (ENSAPLG00000008866) #14	PSKH1 (ENSAPLG00000009622) #15	NRN1L (ENSAPLG00000026334) #16	EDC4 (ENSAPLG00000009238) #17	NUTF2 (ENSAPLG00000009210) #18	THAP11 (ENSAPLG00000028979) #19	ENSAPLG00000008854 #20	ENSAPLG00000008665	RANBP10 (ENSAPLG00000010803) #22	ENSAPLG00000027334	ENSAPLG00000012318	PLLP (ENSAPLG00000016886)	ARL2BP (ENSAPLG00000012932)	RSPRY1 (ENSAPLG00000012937)	PSME3IP1 (ENSAPLG00000013298)	ENSAPLG00000013415	NLRC5 (ENSAPLG00000014412)	CETP (ENSAPLG00000014801)	HERPUD1 (ENSAPLG00000015583)	PARD6A (ENSAPLG00000017430) #26	ENKD1 (ENSAPLG00000015716) #25	GFOD2 (ENSAPLG00000015743) #23	NDRG4 (ENSAPLG00000015766)	GINS3 (ENSAPLG00000026073)
Pink-footed goose	MODERN SPECIES	28	ENSABRG00000004281	LCAT (ENSABRG00000004284) #12	MATCAP1 (ENSABRG00000004297)	TMEM208 (ENSABRG00000004312)	ELMO3 (ENSABRG00000004359)	E2F4 (ENSABRG00000004516)	EXOC3L1 (ENSABRG00000004552)	CTRL (ENSABRG00000004597) #14	PSKH1 (ENSABRG00000004618) #15	NRN1L (ENSABRG00000004644) #16	EDC4 (ENSABRG00000004784) #17	NUTF2 (ENSABRG00000006063) #18	THAP11 (ENSABRG00000006069) #19	CENPT (ENSABRG00000006074) #20	ENSABRG00000006098	RANBP10 (ENSABRG00000006142) #22	ENSABRG00000006339	ENSABRG00000006350	ENSABRG00000006353	PLLP (ENSABRG00000006367)	ARL2BP (ENSABRG00000006397)	RSPRY1 (ENSABRG00000006408)	PSME3IP1 (ENSABRG00000006438)	CPNE2 (ENSABRG00000006448)	CETP (ENSABRG00000006607)	HERPUD1 (ENSABRG00000006746)	ENSABRG00000006749	PARD6A (ENSABRG00000006762) #26	ENKD1 (ENSABRG00000006779) #25	ENSABRG00000006804 #23	ENSABRG00000006811 #23
Phasianidae	ANCESTRAL SPECIES	12	ENSGT00940000163363.e.a.b.d.c	ENSGT00940000160052 #12	ENSGT00390000004417.b	ENSGT00390000008139	ENSGT00940000159455	ENSGT00940000156252	ENSGT01030000234613.a.b	ENSGT00940000154494.b #14	ENSGT00940000157041.a #15	ENSGT00530000063853.a.b #16	ENSGT00510000047791 #17	ENSGT00510000047030 #18	ENSGT00390000006585 #19	ENSGT00390000003044 #20	ENSGT00940000165060	ENSGT00940000158257 #22	ENSGT00990000204304	ENSGT01030000235537	ENSGT00940000156011	ENSGT00390000015052.j	ENSGT00940000157894	ENSGT00500000044916	ENSGT00940000157653	ENSGT00940000160652	ENSGT01100000263545.a.b.d.a	ENSGT00390000017671.b	ENSGT00950000183211.a.a.b #26	ENSGT00940000153866.B #25	ENSGT00940000156501 #23	ENSGT00390000011417	ENSGT00390000009328
Japanese quail	MODERN SPECIES	2	ENSCJPG00005011600	LCAT (ENSCJPG00005011612) #12	MATCAP1 (ENSCJPG00005011614)	TMEM208 (ENSCJPG00005011621)	ELMO3 (ENSCJPG00005011622)	E2F4 (ENSCJPG00005011947)	EXOC3L1 (ENSCJPG00005011949)	CTRL (ENSCJPG00005011950) #14	PSKH1 (ENSCJPG00005011954) #15	NRN1L (ENSCJPG00005011955) #16	EDC4 (ENSCJPG00005011956) #17	NUTF2 (ENSCJPG00005011960) #18	THAP11 (ENSCJPG00005011962) #19	CENPT (ENSCJPG00005011965) #20	ENSCJPG00005011967	RANBP10 (ENSCJPG00005012001) #22	ENSCJPG00005012002	ENSCJPG00005012004	PLLP (ENSCJPG00005012007)	ENSCJPG00005012010	ARL2BP (ENSCJPG00005012011)	RSPRY1 (ENSCJPG00005012012)	ENSCJPG00005012013	ENSCJPG00005012014	CPNE2 (ENSCJPG00005012015)	CETP (ENSCJPG00005012017)	HERPUD1 (ENSCJPG00005012025)	ENSCJPG00005012026	PARD6A (ENSCJPG00005012027) #26	ENKD1 (ENSCJPG00005012028) #25	ENSCJPG00005012029 #23
Phasianidae_b	ANCESTRAL SPECIES	14	ENSGT00940000163363.e.a.b.d.c	ENSGT00940000160052 #12	ENSGT00390000004417.b	ENSGT00390000008139	ENSGT00940000159455	ENSGT00940000156252	ENSGT01030000234613.a.b	ENSGT00940000154494.b #14	ENSGT00940000157041.a #15	ENSGT00530000063853.a.b #16	ENSGT00510000047791 #17	ENSGT00510000047030 #18	ENSGT00960000189770	ENSGT00390000003044 #20	ENSGT00940000165060	ENSGT00940000158257 #22	ENSGT00990000204304	ENSGT01100000263482.F	ENSGT00940000156011	ENSGT00390000015052.j	ENSGT00940000157894	ENSGT00500000044916	ENSGT00940000157653	ENSGT00940000160652	ENSGT01100000263545.a.b.d.a	ENSGT00390000017671.b	ENSGT00950000183211.a.a.b #26	ENSGT00940000153866.B #25	ENSGT00940000156501 #23	ENSGT00390000011417	ENSGT00390000009328
Turkey	DUPLICATION
Turkey	MODERN SPECIES	4	ENSMGAG00000003268	ENSMGAG00000022109	ENSMGAG00000003222	ENSMGAG00000003176	GFOD2 (ENSMGAG00000017669) #23	ENSMGAG00000003143 #26	ENSMGAG00000003151 #25	ENSMGAG00000003023	ENSMGAG00000003100	ENSMGAG00000017985	ENSMGAG00000002857	ENSMGAG00000002881	RSPRY1 (ENSMGAG00000002807)	ENSMGAG00000002760	ENSMGAG00000002773	ENSMGAG00000002787 #22	ENSMGAG00000002741	ENSMGAG00000022142 #22	ENSMGAG00000002744	ENSMGAG00000020886	ENSMGAG00000002707 #18	ENSMGAG00000002644 #17	ENSMGAG00000017751 #16	ENSMGAG00000002565	ENSMGAG00000002599 #14	ENSMGAG00000002634 #15	ENSMGAG00000002517	ENSMGAG00000021267	ELMO3 (ENSMGAG00000002446)	ENSMGAG00000002377	ENSMGAG00000002386
Turkey	MODERN SPECIES	4	ENSMGAG00000003222	ENSMGAG00000003176	GFOD2 (ENSMGAG00000017669) #23	ENSMGAG00000003143 #26	ENSMGAG00000003151 #25	ENSMGAG00000003023	ENSMGAG00000003100	ENSMGAG00000017985	ENSMGAG00000002857	ENSMGAG00000002881	RSPRY1 (ENSMGAG00000002807)	ENSMGAG00000002760	ENSMGAG00000002773	ENSMGAG00000002787 #22	ENSMGAG00000002741	ENSMGAG00000022142 #22	ENSMGAG00000002744	ENSMGAG00000020886	ENSMGAG00000002707 #18	ENSMGAG00000002644 #17	ENSMGAG00000017751 #16	ENSMGAG00000002565	ENSMGAG00000002599 #14	ENSMGAG00000002634 #15	ENSMGAG00000002517	ENSMGAG00000021267	ELMO3 (ENSMGAG00000002446)	ENSMGAG00000002377	ENSMGAG00000002386	ENSMGAG00000002421 #12	ENSMGAG00000002310
Chicken	DUPLICATION
Chicken	MODERN SPECIES	11	NUP153 (ENSGALG00010011210)	FAM8A1 (ENSGALG00010011184)	CAP2 (ENSGALG00010012730)	RBM24 (ENSGALG00010011170)	ENSGALG00010011134	ATXN1 (ENSGALG00010011126)	ENSGALG00010012136	GMPR2 (ENSGALG00010011118)	MYLIP (ENSGALG00010011064)	DTNBP1 (ENSGALG00010009705)	JARID2 (ENSGALG00010009678)	ENSGALG00010012670	ENSGALG00010010874	RNF182 (ENSGALG00010007855)	MCUR1 (ENSGALG00010007796)	ENSGALG00010007792 #22	RANBP9 (ENSGALG00010008939)	NOL7 (ENSGALG00010007783)	SIRT5 (ENSGALG00010007780)	KIF13A (ENSGALG00010007777)	NHLRC1 (ENSGALG00010008456)	ENSGALG00010007766	ENSGALG00010007761	DEK (ENSGALG00010007758)	RNF144B (ENSGALG00010007433)	ID4 (ENSGALG00010006926)	MBOAT1 (ENSGALG00010007108)	ENSGALG00010007060	E2F3 (ENSGALG00010007051)	CDKAL1 (ENSGALG00010008147)	SOX4 (ENSGALG00010008146)
Chicken	MODERN SPECIES	2	ENSGALG00010022479	LCAT (ENSGALG00010022401) #12	MATCAP1 (ENSGALG00010022143)	TMEM208 (ENSGALG00010022142)	ELMO3 (ENSGALG00010022129)	E2F4 (ENSGALG00010022115)	EXOC3L1 (ENSGALG00010022104)	CTRL (ENSGALG00010022092) #14	PSKH1 (ENSGALG00010021951) #15	NRN1L (ENSGALG00010021924) #16	EDC4 (ENSGALG00010021908) #17	NUTF2 (ENSGALG00010021887) #18	ENSGALG00010021853	CENPT (ENSGALG00010021841) #20	ENSGALG00010021831	RANBP10 (ENSGALG00010021798) #22	CCL17 (ENSGALG00010022208)	CX3CL1 (ENSGALG00010022202)	PLLP (ENSGALG00010022180)	ENSGALG00010022176	ARL2BP (ENSGALG00010025800)	RSPRY1 (ENSGALG00010022170)	FAM192A (ENSGALG00010022165)	CPNE2 (ENSGALG00010022150)	NLRC5 (ENSGALG00010022005)	CETP (ENSGALG00010021935)	HERPUD1 (ENSGALG00010024370)	PARD6A (ENSGALG00010024366) #26	ENKD1 (ENSGALG00010025832) #25	GFOD2 (ENSGALG00010022340) #23	CIAPIN1 (ENSGALG00010022296)
Anura	ANCESTRAL SPECIES	350												ENSGT00510000047030 #18	ENSGT00390000006585 #19	ENSGT00390000003044 #20	ENSGT00390000018598 #21	ENSGT00940000158257 #22
Leishan spiny toad	MODERN SPECIES	1	ENSLLEG00000015231	MMP2 (ENSLLEG00000014792)	ENSLLEG00000014721 #9	DDX28 (ENSLLEG00000014700)	ENSLLEG00000014232	PSKH1 (ENSLLEG00000014172) #15	ENSLLEG00000014148	ENSLLEG00000014094 #18	ENSLLEG00000014072	EDC4 (ENSLLEG00000013380) #17	ENSLLEG00000013259	THAP11 (ENSLLEG00000013244) #19	ENSLLEG00000013172 #20	ENSLLEG00000013160	ENSLLEG00000013053 #21	RANBP10 (ENSLLEG00000012839) #22	ENSLLEG00000012812	GFOD2 (ENSLLEG00000012787) #23	ENSLLEG00000012642 #25	ENSLLEG00000012773 #26	ENSLLEG00000012608	ENSLLEG00000012263	ENSLLEG00000012224	ENSLLEG00000012164	ENSLLEG00000012145	OSGIN1 (ENSLLEG00000012098)	ENSLLEG00000011638	NECAB2 (ENSLLEG00000011552)	ENSLLEG00000011468	SLC38A8 (ENSLLEG00000011356)	MBTPS1 (ENSLLEG00000011212)