Pseudocrenilabrinae_A	ANCESTRAL SPECIES	8	ENSGT01000000214675.a	ENSGT00940000156811.a #7	ENSGT00940000157207.a.b #10	ENSGT00940000156902.a #11	ENSGT00940000164790.b #12	ENSGT00940000153877.a.b #14	ENSGT00530000065225 #13	ENSGT00530000063497.a.b #15	ENSGT00390000012903 #16	ENSGT00390000000224 #17	ENSGT00940000177481	ENSGT00940000153181 #18	ENSGT00440000038585.d #19	ENSGT00530000063156.a.a.b #20	ENSGT00940000156340.a.c #21	ENSGT00940000163205.c.h #22	ENSGT00940000163205.c.g #23	ENSGT01020000230351.D.a.a.b #24	ENSGT00940000163543.a #25	ENSGT00940000154687.B.q.b #26	ENSGT00940000165787.a.b #27	ENSGT00940000154130.a.b.f #30	ENSGT00950000182888.a.b #31	ENSGT00390000004247 #32	ENSGT00400000024875.c.b #33	ENSGT00400000024875.c.a.a.a #34	ENSGT00400000024875.c.a.a.b.a.a.a.a #35	ENSGT00400000024875.c.a.a.b.a.b.p.a ##33	ENSGT00400000024875.c.a.a.b.a.a.a.b ##33	ENSGT00400000024875.c.a.a.b.a.b.o #37	ENSGT00940000159387.e
Haplochromini	ANCESTRAL SPECIES	4	ENSGT01000000214675.a	ENSGT00940000156811.a #7	ENSGT00940000157207.a.b #10	ENSGT00940000156902.a #11	ENSGT00940000164790.b #12	ENSGT00940000153877.a.b #14	ENSGT00530000065225 #13	ENSGT00530000063497.a.b #15	ENSGT00390000012903 #16	ENSGT00390000000224 #17	ENSGT00940000177481	ENSGT00940000153181 #18	ENSGT00440000038585.d #19	ENSGT00530000063156.a.a.b #20	ENSGT00940000156340.a.c #21	ENSGT00940000163205.c.h #22	ENSGT00940000163205.c.g #23	ENSGT01020000230351.D.a.a.b #24	ENSGT00940000163543.a #25	ENSGT00940000154687.B.q.b #26	ENSGT00940000165787.a.b.g.a #27	ENSGT00940000165787.a.b.g.b #29	ENSGT00940000154130.a.b.f #30	ENSGT00950000182888.a.b #31	ENSGT00390000004247 #32	ENSGT00400000024875.c.b #33	ENSGT00400000024875.c.a.a.a #34	ENSGT00400000024875.c.a.a.b.a.a.a.a #35	ENSGT00400000024875.c.a.a.b.a.b.p.a ##33	ENSGT00400000024875.c.a.a.b.a.b.o #37	ENSGT00940000159387.e
Haplochromini_A	ANCESTRAL SPECIES	4	ENSGT01000000214675.a	ENSGT00940000156811.a #7	ENSGT00940000157207.a.b #10	ENSGT00940000156902.a #11	ENSGT00940000164790.b #12	ENSGT00940000153877.a.b #14	ENSGT00530000065225 #13	ENSGT00530000063497.a.b #15	ENSGT00390000012903 #16	ENSGT00390000000224 #17	ENSGT00940000177481	ENSGT00940000153181 #18	ENSGT00440000038585.d #19	ENSGT00530000063156.a.a.b #20	ENSGT00940000156340.a.c #21	ENSGT00940000163205.c.h #22	ENSGT00940000163205.c.g #23	ENSGT01020000230351.D.a.a.b #24	ENSGT00940000163543.a #25	ENSGT00940000154687.B.q.b #26	ENSGT00940000165787.a.b.g.a #27	ENSGT00940000165787.a.b.g.b #29	ENSGT00940000154130.a.b.f #30	ENSGT00950000182888.a.b #31	ENSGT00390000004247 #32	ENSGT00400000024875.c.b #33	ENSGT00400000024875.c.a.a.a #34	ENSGT00400000024875.c.a.a.b.a.a.a.a #35	ENSGT00400000024875.c.a.a.b.a.b.p.a ##33	ENSGT00400000024875.c.a.a.b.a.b.o #37	ENSGT00940000159387.e
Haplochromini_B	ANCESTRAL SPECIES	2	ENSGT01000000214675.a	ENSGT00940000156811.a #7	ENSGT00940000157207.a.b #10	ENSGT00940000156902.a #11	ENSGT00940000164790.b #12	ENSGT00940000153877.a.b #14	ENSGT00530000065225 #13	ENSGT00530000063497.a.b #15	ENSGT00390000012903 #16	ENSGT00390000000224 #17	ENSGT00940000177481	ENSGT00940000153181 #18	ENSGT00440000038585.d #19	ENSGT00530000063156.a.a.b #20	ENSGT00940000156340.a.c #21	ENSGT00940000163205.c.h #22	ENSGT00940000163205.c.g #23	ENSGT01020000230351.D.a.a.b #24	ENSGT00940000163543.a #25	ENSGT00940000154687.B.q.b #26	ENSGT00940000165787.a.b.g.a #27	ENSGT00940000165787.a.b.h #28	ENSGT00940000165787.a.b.g.b #29	ENSGT00940000154130.a.b.f #30	ENSGT00950000182888.a.b #31	ENSGT00390000004247 #32	ENSGT00400000024875.c.b #33	ENSGT00400000024875.c.a.a.a #34	ENSGT00400000024875.c.a.a.b.a.a.a.a #35	ENSGT00400000024875.c.a.a.b.a.b.p.a ##33	ENSGT00400000024875.c.a.a.b.a.b.o #37
Zebra mbuna	MODERN SPECIES	1094	EEIG1 (ENSMZEG00005020220) #7	ENSMZEG00005020218 #8	ENSMZEG00005020216 #9	slc25a25a (ENSMZEG00005020213) #10	zdhhc12a (ENSMZEG00005020210) #11	ENSMZEG00005020205 #12	si:ch211-51h9.7 (ENSMZEG00005020203) #13	SET (ENSMZEG00005020199) #14	odf2b (ENSMZEG00005020190) #15	gle1 (ENSMZEG00005020182) #16	ptgesl (ENSMZEG00005020177) #17	ralgds (ENSMZEG00005020129) #18	SMARCB1 (ENSMZEG00005020105) #19	derl3 (ENSMZEG00005020099) #20	MMP11 (ENSMZEG00005020095) #21	gstt1a (ENSMZEG00005020082) #22	gstt1a (ENSMZEG00005020077) #23	p2rx7 (ENSMZEG00005020072) #24	GPR21 (ENSMZEG00005020069) #25	ENSMZEG00005020033 #26	ENSMZEG00005020022 #27	ENSMZEG00005020020 #28	ENSMZEG00005020017 #29	sh2d3cb (ENSMZEG00005020011) #30	tor2a (ENSMZEG00005020008) #31	ptrh1 (ENSMZEG00005020001) #32	ENSMZEG00005019998 #33	ENSMZEG00005019992 #34	ENSMZEG00005019973 #35	ENSMZEG00005019970 #36	ENSMZEG00005019966 #37
Eastern happy	MODERN SPECIES	3	ENSACLG00000000842	EEIG1 (ENSACLG00000000773) #7	slc25a25a (ENSACLG00000000744) #10	zdhhc12a (ENSACLG00000000722) #11	ENSACLG00000000701 #12	SET (ENSACLG00000000683) #14	si:ch211-51h9.7 (ENSACLG00000000679) #13	odf2b (ENSACLG00000000651) #15	gle1 (ENSACLG00000000598) #16	ptgesl (ENSACLG00000000568) #17	ENSACLG00000000560	ralgds (ENSACLG00000000484) #18	SMARCB1 (ENSACLG00000000461) #19	derl3 (ENSACLG00000000439) #20	MMP11 (ENSACLG00000000434) #21	gstt1a (ENSACLG00000000172) #22	gstt1a (ENSACLG00000000157) #23	ENSACLG00000000147	p2rx7 (ENSACLG00000025679) #24	GPR21 (ENSACLG00000025672) #25	ENSACLG00000025639 #26	ENSACLG00000025560 #27	ENSACLG00000025547 #28	ENSACLG00000025541 #29	sh2d3cb (ENSACLG00000025496) #30	ENSACLG00000025490 #28	ENSACLG00000025487 #27	tor2a (ENSACLG00000025481) #31	ENSACLG00000025471	ptrh1 (ENSACLG00000025462) #32	ENSACLG00000025458 #33
P. nyererei	MODERN SPECIES	333	cnot6l (ENSPNYG00000006717)	ENSPNYG00000006814	EEIG1 (ENSPNYG00000006862) #7	slc25a25a (ENSPNYG00000006896) #10	zdhhc12a (ENSPNYG00000006930) #11	ENSPNYG00000006951 #12	SET (ENSPNYG00000006988) #14	si:ch211-51h9.7 (ENSPNYG00000007013) #13	gle1 (ENSPNYG00000007027) #16	ptgesl (ENSPNYG00000007045) #17	ralgds (ENSPNYG00000007083) #18	ENSPNYG00000007183	SMARCB1 (ENSPNYG00000007201) #19	derl3 (ENSPNYG00000007239) #20	MMP11 (ENSPNYG00000007281) #21	gstt1a (ENSPNYG00000007334) #22	gstt1a (ENSPNYG00000007397) #23	p2rx7 (ENSPNYG00000007433) #24	GPR21 (ENSPNYG00000007627) #25	ENSPNYG00000007650 #26	sh2d3cb (ENSPNYG00000007723) #30	ENSPNYG00000007744 #29	ENSPNYG00000007753 #27	tor2a (ENSPNYG00000007767) #31	ptrh1 (ENSPNYG00000007789) #32	ENSPNYG00000007800 #33	ENSPNYG00000007808 #34	ENSPNYG00000007817 ##33	ENSPNYG00000007829 #37	FAM163B (ENSPNYG00000007834)	ADAMTSL2 (ENSPNYG00000007852)
Burton s mouthbrooder	MODERN SPECIES	920			EEIG1 (ENSHBUG00000011044) #7	slc25a25a (ENSHBUG00000010942) #10	zdhhc12a (ENSHBUG00000010888) #11	ENSHBUG00000010880 #12	SET (ENSHBUG00000010839) #14	si:ch211-51h9.7 (ENSHBUG00000010818) #13	odf2b (ENSHBUG00000010813) #15	gle1 (ENSHBUG00000010794) #16	ptgesl (ENSHBUG00000010774) #17	ralgds (ENSHBUG00000010721) #18	SMARCB1 (ENSHBUG00000010668) #19	derl3 (ENSHBUG00000010631) #20	ENSHBUG00000010604 #21	gstt1a (ENSHBUG00000010588) #22
Lyretail cichlid	MODERN SPECIES	342	cnot6l (ENSNBRG00000016345)	ENSNBRG00000016296	EEIG1 (ENSNBRG00000016255) #7	ENSNBRG00000016231	zdhhc12a (ENSNBRG00000016210) #11	ENSNBRG00000016206 #12	SET (ENSNBRG00000016087) #14	si:ch211-51h9.7 (ENSNBRG00000016071) #13	gle1 (ENSNBRG00000016042) #16	ptgesl (ENSNBRG00000016023) #17	ENSNBRG00000016013	ralgds (ENSNBRG00000015947) #18	SMARCB1 (ENSNBRG00000015916) #19	derl3 (ENSNBRG00000015902) #20	MMP11 (ENSNBRG00000015886) #21	gstt1a (ENSNBRG00000015807) #22	gstt1a (ENSNBRG00000015768) #23	p2rx7 (ENSNBRG00000015740) #24	GPR21 (ENSNBRG00000015726) #25	ENSNBRG00000015688 #26	tor2a (ENSNBRG00000015637) #31	ptrh1 (ENSNBRG00000015590) #32	ENSNBRG00000015582 #33	ENSNBRG00000015575 #35	ENSNBRG00000015562 ##33	ENSNBRG00000015556 #37	FAM163B (ENSNBRG00000015543)	ADAMTSL2 (ENSNBRG00000015443)	mymk (ENSNBRG00000015410)	ENSNBRG00000015352	slc2a8 (ENSNBRG00000015335)