Cichlidae	DUPLICATION
Cichlidae	ANCESTRAL SPECIES	6	ENSGT01000000214675 #8	ENSGT00940000156811.a #9	ENSGT00940000157207.a.b #10	ENSGT00940000156902.a #11	ENSGT00940000164790.b #12	ENSGT00940000153877.a.b #13	ENSGT00530000065225 #14	ENSGT00530000063497.a.b	ENSGT00390000012903 #15	ENSGT00390000000224 #16	ENSGT00940000177481 #18	ENSGT00940000153181 #17	ENSGT00440000038585.d #19	ENSGT00530000063156.a.a.b #20	ENSGT00940000156340.a.c #21	ENSGT00940000163205.c.h #22	ENSGT00940000163205.c.g #23	ENSGT01020000230351.D.a.a.b #24	ENSGT00940000163543.a #25	ENSGT00940000154687.B.q.b #26	ENSGT00940000165787.a.b #29	ENSGT00940000154130.a.b.f #27	ENSGT00950000182888.a.b #30	ENSGT00390000004247 #31	ENSGT00400000024875.c.b #32	ENSGT00400000024875.c.a.a.a #33	ENSGT00400000024875.c.a.a.b.a.a.a.a ##35	ENSGT00400000024875.c.a.a.b.a.b #35	ENSGT00940000159387.e #36	ENSGT00940000159447 #37	ENSGT00940000160710
Pseudocrenilabrinae	ANCESTRAL SPECIES	11	ENSGT01000000214675.a #8	ENSGT00940000156811.a #9	ENSGT00940000157207.a.b #10	ENSGT00940000156902.a #11	ENSGT00940000164790.b #12	ENSGT00940000153877.a.b #13	ENSGT00530000065225 #14	ENSGT00530000063497.a.b	ENSGT00390000012903 #15	ENSGT00390000000224 #16	ENSGT00940000177481 #18	ENSGT00940000153181 #17	ENSGT00440000038585.d #19	ENSGT00530000063156.a.a.b #20	ENSGT00940000156340.a.c #21	ENSGT00940000163205.c.h #22	ENSGT00940000163205.c.g #23	ENSGT01020000230351.D.a.a.b #24	ENSGT00940000163543.a #25	ENSGT00940000154687.B.q.b #26	ENSGT00940000165787.a.b #29	ENSGT00940000154130.a.b.f #27	ENSGT00950000182888.a.b #30	ENSGT00390000004247 #31	ENSGT00400000024875.c.b #32	ENSGT00400000024875.c.a.a.a #33	ENSGT00400000024875.c.a.a.b.a.a.a.a ##35	ENSGT00400000024875.c.a.a.b.a.b.p.a #34	ENSGT00400000024875.c.a.a.b.a.a.a.b ##35	ENSGT00400000024875.c.a.a.b.a.b.o #35	ENSGT00940000159387.e #36
Pseudocrenilabrinae_A	ANCESTRAL SPECIES	8	ENSGT01000000214675.a #8	ENSGT00940000156811.a #9	ENSGT00940000157207.a.b #10	ENSGT00940000156902.a #11	ENSGT00940000164790.b #12	ENSGT00940000153877.a.b #13	ENSGT00530000065225 #14	ENSGT00530000063497.a.b	ENSGT00390000012903 #15	ENSGT00390000000224 #16	ENSGT00940000177481 #18	ENSGT00940000153181 #17	ENSGT00440000038585.d #19	ENSGT00530000063156.a.a.b #20	ENSGT00940000156340.a.c #21	ENSGT00940000163205.c.h #22	ENSGT00940000163205.c.g #23	ENSGT01020000230351.D.a.a.b #24	ENSGT00940000163543.a #25	ENSGT00940000154687.B.q.b #26	ENSGT00940000165787.a.b #29	ENSGT00940000154130.a.b.f #27	ENSGT00950000182888.a.b #30	ENSGT00390000004247 #31	ENSGT00400000024875.c.b #32	ENSGT00400000024875.c.a.a.a #33	ENSGT00400000024875.c.a.a.b.a.a.a.a ##35	ENSGT00400000024875.c.a.a.b.a.b.p.a #34	ENSGT00400000024875.c.a.a.b.a.a.a.b ##35	ENSGT00400000024875.c.a.a.b.a.b.o #35	ENSGT00940000159387.e #36
Haplochromini	ANCESTRAL SPECIES	4	ENSGT01000000214675.a #8	ENSGT00940000156811.a #9	ENSGT00940000157207.a.b #10	ENSGT00940000156902.a #11	ENSGT00940000164790.b #12	ENSGT00940000153877.a.b #13	ENSGT00530000065225 #14	ENSGT00530000063497.a.b	ENSGT00390000012903 #15	ENSGT00390000000224 #16	ENSGT00940000177481 #18	ENSGT00940000153181 #17	ENSGT00440000038585.d #19	ENSGT00530000063156.a.a.b #20	ENSGT00940000156340.a.c #21	ENSGT00940000163205.c.h #22	ENSGT00940000163205.c.g #23	ENSGT01020000230351.D.a.a.b #24	ENSGT00940000163543.a #25	ENSGT00940000154687.B.q.b #26	ENSGT00940000165787.a.b.g.a #29	ENSGT00940000165787.a.b.g.b #28	ENSGT00940000154130.a.b.f #27	ENSGT00950000182888.a.b #30	ENSGT00390000004247 #31	ENSGT00400000024875.c.b #32	ENSGT00400000024875.c.a.a.a #33	ENSGT00400000024875.c.a.a.b.a.a.a.a ##35	ENSGT00400000024875.c.a.a.b.a.b.p.a #34	ENSGT00400000024875.c.a.a.b.a.b.o #35	ENSGT00940000159387.e #36
Haplochromini_A	ANCESTRAL SPECIES	4	ENSGT01000000214675.a #8	ENSGT00940000156811.a #9	ENSGT00940000157207.a.b #10	ENSGT00940000156902.a #11	ENSGT00940000164790.b #12	ENSGT00940000153877.a.b #13	ENSGT00530000065225 #14	ENSGT00530000063497.a.b	ENSGT00390000012903 #15	ENSGT00390000000224 #16	ENSGT00940000177481 #18	ENSGT00940000153181 #17	ENSGT00440000038585.d #19	ENSGT00530000063156.a.a.b #20	ENSGT00940000156340.a.c #21	ENSGT00940000163205.c.h #22	ENSGT00940000163205.c.g #23	ENSGT01020000230351.D.a.a.b #24	ENSGT00940000163543.a #25	ENSGT00940000154687.B.q.b #26	ENSGT00940000165787.a.b.g.a #29	ENSGT00940000165787.a.b.g.b #28	ENSGT00940000154130.a.b.f #27	ENSGT00950000182888.a.b #30	ENSGT00390000004247 #31	ENSGT00400000024875.c.b #32	ENSGT00400000024875.c.a.a.a #33	ENSGT00400000024875.c.a.a.b.a.a.a.a ##35	ENSGT00400000024875.c.a.a.b.a.b.p.a #34	ENSGT00400000024875.c.a.a.b.a.b.o #35	ENSGT00940000159387.e #36
P. nyererei	MODERN SPECIES	333	cnot6l (ENSPNYG00000006717) #7	ENSPNYG00000006814 #8	EEIG1 (ENSPNYG00000006862) #9	slc25a25a (ENSPNYG00000006896) #10	zdhhc12a (ENSPNYG00000006930) #11	ENSPNYG00000006951 #12	SET (ENSPNYG00000006988) #13	si:ch211-51h9.7 (ENSPNYG00000007013) #14	gle1 (ENSPNYG00000007027) #15	ptgesl (ENSPNYG00000007045) #16	ralgds (ENSPNYG00000007083) #17	ENSPNYG00000007183 #18	SMARCB1 (ENSPNYG00000007201) #19	derl3 (ENSPNYG00000007239) #20	MMP11 (ENSPNYG00000007281) #21	gstt1a (ENSPNYG00000007334) #22	gstt1a (ENSPNYG00000007397) #23	p2rx7 (ENSPNYG00000007433) #24	GPR21 (ENSPNYG00000007627) #25	ENSPNYG00000007650 #26	sh2d3cb (ENSPNYG00000007723) #27	ENSPNYG00000007744 #28	ENSPNYG00000007753 #29	tor2a (ENSPNYG00000007767) #30	ptrh1 (ENSPNYG00000007789) #31	ENSPNYG00000007800 #32	ENSPNYG00000007808 #33	ENSPNYG00000007817 #34	ENSPNYG00000007829 #35	FAM163B (ENSPNYG00000007834) #36	ADAMTSL2 (ENSPNYG00000007852) #37
Cichlidae	ANCESTRAL SPECIES	6	ENSGT00940000156811.a #9	ENSGT00940000157207.a.b #10	ENSGT00940000156902.a #11	ENSGT00940000164790.b #12	ENSGT00940000153877.a.b #13	ENSGT00530000065225 #14	ENSGT00530000063497.a.b	ENSGT00390000012903 #15	ENSGT00390000000224 #16	ENSGT00940000177481 #18	ENSGT00940000153181 #17	ENSGT00440000038585.d #19	ENSGT00530000063156.a.a.b #20	ENSGT00940000156340.a.c #21	ENSGT00940000163205.c.h #22	ENSGT00940000163205.c.g #23	ENSGT01020000230351.D.a.a.b #24	ENSGT00940000163543.a #25	ENSGT00940000154687.B.q.b #26	ENSGT00940000165787.a.b #29	ENSGT00940000154130.a.b.f #27	ENSGT00950000182888.a.b #30	ENSGT00390000004247 #31	ENSGT00400000024875.c.b #32	ENSGT00400000024875.c.a.a.a #33	ENSGT00400000024875.c.a.a.b.a.a.a.a ##35	ENSGT00400000024875.c.a.a.b.a.b #35	ENSGT00940000159387.e #36	ENSGT00940000159447 #37	ENSGT00940000160710	ENSGT00390000004550
Pseudocrenilabrinae	ANCESTRAL SPECIES	11	ENSGT00940000156811.a #9	ENSGT00940000157207.a.b #10	ENSGT00940000156902.a #11	ENSGT00940000164790.b #12	ENSGT00940000153877.a.b #13	ENSGT00530000065225 #14	ENSGT00530000063497.a.b	ENSGT00390000012903 #15	ENSGT00390000000224 #16	ENSGT00940000177481 #18	ENSGT00940000153181 #17	ENSGT00440000038585.d #19	ENSGT00530000063156.a.a.b #20	ENSGT00940000156340.a.c #21	ENSGT00940000163205.c.h #22	ENSGT00940000163205.c.g #23	ENSGT01020000230351.D.a.a.b #24	ENSGT00940000163543.a #25	ENSGT00940000154687.B.q.b #26	ENSGT00940000165787.a.b #29	ENSGT00940000154130.a.b.f #27	ENSGT00950000182888.a.b #30	ENSGT00390000004247 #31	ENSGT00400000024875.c.b #32	ENSGT00400000024875.c.a.a.a #33	ENSGT00400000024875.c.a.a.b.a.a.a.a ##35	ENSGT00400000024875.c.a.a.b.a.b.p.a #34	ENSGT00400000024875.c.a.a.b.a.a.a.b ##35	ENSGT00400000024875.c.a.a.b.a.b.o #35	ENSGT00940000159387.e #36	ENSGT00940000159447 #37
Pseudocrenilabrinae_A	ANCESTRAL SPECIES	8	ENSGT00940000156811.a #9	ENSGT00940000157207.a.b #10	ENSGT00940000156902.a #11	ENSGT00940000164790.b #12	ENSGT00940000153877.a.b #13	ENSGT00530000065225 #14	ENSGT00530000063497.a.b	ENSGT00390000012903 #15	ENSGT00390000000224 #16	ENSGT00940000177481 #18	ENSGT00940000153181 #17	ENSGT00440000038585.d #19	ENSGT00530000063156.a.a.b #20	ENSGT00940000156340.a.c #21	ENSGT00940000163205.c.h #22	ENSGT00940000163205.c.g #23	ENSGT01020000230351.D.a.a.b #24	ENSGT00940000163543.a #25	ENSGT00940000154687.B.q.b #26	ENSGT00940000165787.a.b #29	ENSGT00940000154130.a.b.f #27	ENSGT00950000182888.a.b #30	ENSGT00390000004247 #31	ENSGT00400000024875.c.b #32	ENSGT00400000024875.c.a.a.a #33	ENSGT00400000024875.c.a.a.b.a.a.a.a ##35	ENSGT00400000024875.c.a.a.b.a.b.p.a #34	ENSGT00400000024875.c.a.a.b.a.a.a.b ##35	ENSGT00400000024875.c.a.a.b.a.b.o #35	ENSGT00940000159387.e #36	ENSGT00940000159447 #37
Haplochromini	ANCESTRAL SPECIES	4	ENSGT00940000156811.a #9	ENSGT00940000157207.a.b #10	ENSGT00940000156902.a #11	ENSGT00940000164790.b #12	ENSGT00940000153877.a.b #13	ENSGT00530000065225 #14	ENSGT00530000063497.a.b	ENSGT00390000012903 #15	ENSGT00390000000224 #16	ENSGT00940000177481 #18	ENSGT00940000153181 #17	ENSGT00440000038585.d #19	ENSGT00530000063156.a.a.b #20	ENSGT00940000156340.a.c #21	ENSGT00940000163205.c.h #22	ENSGT00940000163205.c.g #23	ENSGT01020000230351.D.a.a.b #24	ENSGT00940000163543.a #25	ENSGT00940000154687.B.q.b #26	ENSGT00940000165787.a.b.g.a #29	ENSGT00940000165787.a.b.g.b #28	ENSGT00940000154130.a.b.f #27	ENSGT00950000182888.a.b #30	ENSGT00390000004247 #31	ENSGT00400000024875.c.b #32	ENSGT00400000024875.c.a.a.a #33	ENSGT00400000024875.c.a.a.b.a.a.a.a ##35	ENSGT00400000024875.c.a.a.b.a.b.p.a #34	ENSGT00400000024875.c.a.a.b.a.b.o #35	ENSGT00940000159387.e #36	ENSGT00940000159447 #37
Haplochromini_A	ANCESTRAL SPECIES	4	ENSGT00940000156811.a #9	ENSGT00940000157207.a.b #10	ENSGT00940000156902.a #11	ENSGT00940000164790.b #12	ENSGT00940000153877.a.b #13	ENSGT00530000065225 #14	ENSGT00530000063497.a.b	ENSGT00390000012903 #15	ENSGT00390000000224 #16	ENSGT00940000177481 #18	ENSGT00940000153181 #17	ENSGT00440000038585.d #19	ENSGT00530000063156.a.a.b #20	ENSGT00940000156340.a.c #21	ENSGT00940000163205.c.h #22	ENSGT00940000163205.c.g #23	ENSGT01020000230351.D.a.a.b #24	ENSGT00940000163543.a #25	ENSGT00940000154687.B.q.b #26	ENSGT00940000165787.a.b.g.a #29	ENSGT00940000165787.a.b.g.b #28	ENSGT00940000154130.a.b.f #27	ENSGT00950000182888.a.b #30	ENSGT00390000004247 #31	ENSGT00400000024875.c.b #32	ENSGT00400000024875.c.a.a.a #33	ENSGT00400000024875.c.a.a.b.a.a.a.a ##35	ENSGT00400000024875.c.a.a.b.a.b.p.a #34	ENSGT00400000024875.c.a.a.b.a.b.o #35	ENSGT00940000159387.e #36	ENSGT00940000159447 #37
P. nyererei	MODERN SPECIES	333	ENSPNYG00000006814 #8	EEIG1 (ENSPNYG00000006862) #9	slc25a25a (ENSPNYG00000006896) #10	zdhhc12a (ENSPNYG00000006930) #11	ENSPNYG00000006951 #12	SET (ENSPNYG00000006988) #13	si:ch211-51h9.7 (ENSPNYG00000007013) #14	gle1 (ENSPNYG00000007027) #15	ptgesl (ENSPNYG00000007045) #16	ralgds (ENSPNYG00000007083) #17	ENSPNYG00000007183 #18	SMARCB1 (ENSPNYG00000007201) #19	derl3 (ENSPNYG00000007239) #20	MMP11 (ENSPNYG00000007281) #21	gstt1a (ENSPNYG00000007334) #22	gstt1a (ENSPNYG00000007397) #23	p2rx7 (ENSPNYG00000007433) #24	GPR21 (ENSPNYG00000007627) #25	ENSPNYG00000007650 #26	sh2d3cb (ENSPNYG00000007723) #27	ENSPNYG00000007744 #28	ENSPNYG00000007753 #29	tor2a (ENSPNYG00000007767) #30	ptrh1 (ENSPNYG00000007789) #31	ENSPNYG00000007800 #32	ENSPNYG00000007808 #33	ENSPNYG00000007817 #34	ENSPNYG00000007829 #35	FAM163B (ENSPNYG00000007834) #36	ADAMTSL2 (ENSPNYG00000007852) #37	mymk (ENSPNYG00000007894)