Glires	ANCESTRAL SPECIES	5	ENSGT00940000160008	ENSGT00940000160273	ENSGT00940000161258	ENSGT00940000162730	ENSGT00940000163260	ENSGT00940000161475	ENSGT00950000182934.a.b	ENSGT00390000013823.b.c.a.a	ENSGT00390000013823.b.c.b	ENSGT00390000013823.b.c.a.b	ENSGT00940000156674	ENSGT00390000018318.u.b.b	ENSGT00390000018318.u.a	ENSGT00950000182978.A.a.a	ENSGT00940000160174 #21	ENSGT00940000155712 #22	ENSGT00940000159614 #23	ENSGT00940000155726 #24	ENSGT00940000156799 #25	ENSGT00940000156274 #26	ENSGT00650000094590	ENSGT00940000156248 #27	ENSGT00940000156509 #28	ENSGT00940000159413 #29	ENSGT00950000183215.c.a.a #30	ENSGT00950000183163.a.b #31	ENSGT00950000182941.a.a.a #32	ENSGT00940000159155 #33	ENSGT00940000157264 #34	ENSGT00940000160083 #35	ENSGT00940000157314.A #36
Rodentia	ANCESTRAL SPECIES	6	ENSGT00940000161306	ENSGT00940000160008	ENSGT00940000161258	ENSGT00940000162730	ENSGT00940000163260	ENSGT00940000161475	ENSGT00950000182934.a.b	ENSGT00390000013823.b.c.a.a	ENSGT00390000013823.b.c.b	ENSGT00390000013823.b.c.a.b	ENSGT00940000156674	ENSGT00390000018318.u.b.b	ENSGT00390000018318.u.a	ENSGT00950000182978.A.a.a	ENSGT00940000160174 #21	ENSGT00940000155712 #22	ENSGT00940000159614 #23	ENSGT00940000155726 #24	ENSGT00940000156799 #25	ENSGT00940000156274 #26	ENSGT00650000094590	ENSGT00940000156248 #27	ENSGT00940000156509 #28	ENSGT00940000159413 #29	ENSGT00950000183215.c.a.a #30	ENSGT00950000183163.a.b #31	ENSGT00950000182941.a.a.a #32	ENSGT00940000159155 #33	ENSGT00940000157264 #34	ENSGT00940000160083 #35	ENSGT00940000157314.A #36
Rodentia_A	ANCESTRAL SPECIES	8	ENSGT00940000160273	ENSGT00940000160008	ENSGT00940000161258	ENSGT00940000162730	ENSGT00940000163260	ENSGT00940000161475	ENSGT00950000182934.a.b	ENSGT00390000013823.b.c.a.a	ENSGT00390000013823.b.c.b	ENSGT00390000013823.b.c.a.b	ENSGT00940000156674	ENSGT00390000018318.u.b.b	ENSGT00390000018318.u.a	ENSGT00950000182978.A.a.a	ENSGT00940000160174 #21	ENSGT00940000155712 #22	ENSGT00940000159614 #23	ENSGT00940000155726 #24	ENSGT00940000156799 #25	ENSGT00940000156274 #26	ENSGT00650000094590	ENSGT00940000156248 #27	ENSGT00940000156509 #28	ENSGT00940000159413 #29	ENSGT00950000183215.c.a.a #30	ENSGT00950000183163.a.b #31	ENSGT00950000182941.a.a.a #32	ENSGT00940000159155 #33	ENSGT00940000157264 #34	ENSGT00940000160083 #35	ENSGT00940000157314.A #36
Hystricomorpha	ANCESTRAL SPECIES	39															ENSGT00940000160174 #21	ENSGT00940000155712 #22	ENSGT00940000159614 #23	ENSGT00940000155726 #24	ENSGT00940000156799 #25	ENSGT00940000156274 #26	ENSGT00940000156248 #27	ENSGT00940000156509 #28	ENSGT00940000159413 #29	ENSGT00950000183215.c.a.a #30	ENSGT00950000183163.a.b #31	ENSGT00950000182941.a.a.a #32	ENSGT00940000159155 #33	ENSGT00940000157264 #34	ENSGT00940000160083 #35	ENSGT00940000157314.A #36	ENSGT00940000161124 #37
Hystricomorpha_a	ANCESTRAL SPECIES	30	ENSGT00390000008642 #7	ENSGT00940000156483 #8	ENSGT00940000156557 #9	ENSGT00940000160715 #10	ENSGT00390000003560 #11	ENSGT00390000004028 #12	ENSGT00940000155913 #13	ENSGT00390000007183 #14	ENSGT00940000154531 #15	ENSGT00940000160610 #16	ENSGT01090000260082.d.b.i #17	ENSGT00390000004172 #18	ENSGT00940000157993 #19	ENSGT00530000063558.B #20	ENSGT00940000160174 #21	ENSGT00940000155712 #22	ENSGT00940000159614 #23	ENSGT00940000155726 #24	ENSGT00940000156799 #25	ENSGT00940000156274 #26	ENSGT00940000156248 #27	ENSGT00940000156509 #28	ENSGT00940000159413 #29	ENSGT00950000183215.c.a.a #30	ENSGT00950000183163.a.b #31	ENSGT00950000182941.a.a.a #32	ENSGT00940000159155 #33	ENSGT00940000157264 #34	ENSGT00940000160083 #35	ENSGT00940000157314.A #36	ENSGT00940000161124 #37
Guinea pig	MODERN SPECIES	41	TMEM242 (ENSCPOG00000036571) #7	ZDHHC14 (ENSCPOG00000038809) #8	SNX9 (ENSCPOG00000007921) #9	SYNJ2 (ENSCPOG00000009144) #10	SERAC1 (ENSCPOG00000011203) #11	GTF2H5 (ENSCPOG00000036287) #12	TULP4 (ENSCPOG00000006991) #13	TMEM181 (ENSCPOG00000004294) #14	DYNLT1 (ENSCPOG00000004297) #15	SYTL3 (ENSCPOG00000004299) #16	EZR (ENSCPOG00000004306) #17	RSPH3 (ENSCPOG00000014634) #18	TAGAP (ENSCPOG00000006603) #19	FNDC1 (ENSCPOG00000006443) #20	TCF21 (ENSCPOG00000024201) #21	TBPL1 (ENSCPOG00000011899) #22	SLC2A12 (ENSCPOG00000001493) #23	SGK1 (ENSCPOG00000001494) #24	ALDH8A1 (ENSCPOG00000007012) #25	HBS1L (ENSCPOG00000007015) #26	MYB (ENSCPOG00000014607) #27	ENSCPOG00000030097 #28	PDE7B (ENSCPOG00000035879) #29	MTFR2 (ENSCPOG00000008084) #30	BCLAF1 (ENSCPOG00000008088) #31	MAP7 (ENSCPOG00000004237) #32	MAP3K5 (ENSCPOG00000004244) #33	PEX7 (ENSCPOG00000007704) #34	SLC35D3 (ENSCPOG00000010798) #35	IL20RA (ENSCPOG00000037107) #36	IL22RA2 (ENSCPOG00000025110) #37
Hystricomorpha_b	ANCESTRAL SPECIES	29	ENSGT00390000008642 #7	ENSGT00940000156483 #8	ENSGT00940000156557 #9	ENSGT00940000160715 #10	ENSGT00390000003560 #11	ENSGT00390000004028 #12	ENSGT00940000155913 #13	ENSGT00390000007183 #14	ENSGT00940000154531 #15	ENSGT00940000160610 #16	ENSGT01090000260082.d.b.i #17	ENSGT00390000004172 #18	ENSGT00940000157993 #19	ENSGT00530000063558.B #20	ENSGT00940000160174 #21	ENSGT00940000155712 #22	ENSGT00940000159614 #23	ENSGT00940000155726 #24	ENSGT00940000156799 #25	ENSGT00940000156274 #26	ENSGT00940000156248 #27	ENSGT00940000156509 #28	ENSGT00940000159413 #29	ENSGT00950000183215.c.a.a #30	ENSGT00950000183163.a.b #31	ENSGT00950000182941.a.a.a #32	ENSGT00940000159155 #33	ENSGT00940000157264 #34	ENSGT00940000160083 #35	ENSGT00940000157314.A #36	ENSGT00940000161124 #37
Degu	DUPLICATION
Degu	DUPLICATION
Degu	MODERN SPECIES	59	ENSODEG00000020466	IFTAP (ENSODEG00000016540)	RAG2 (ENSODEG00000020447)	RAG1 (ENSODEG00000020338)	TRAF6 (ENSODEG00000017071)	PRR5L (ENSODEG00000016913)	COMMD9 (ENSODEG00000017403)	LDLRAD3 (ENSODEG00000017384)	ENSODEG00000016381	FJX1 (ENSODEG00000016768)	ENSODEG00000016254	PAMR1 (ENSODEG00000016795)	SLC1A2 (ENSODEG00000016926)	ENSODEG00000016446	PDHX (ENSODEG00000016591)	ENSODEG00000016598 #22	ENSODEG00000016570	EHF (ENSODEG00000017375)	ELF5 (ENSODEG00000016572)	CAT (ENSODEG00000016770)	ENSODEG00000016618	ABTB2 (ENSODEG00000016924)	NAT10 (ENSODEG00000017069)	CAPRIN1 (ENSODEG00000016723)	ENSODEG00000020372	LMO2 (ENSODEG00000016866)	FBXO3 (ENSODEG00000016802)	ENSODEG00000016777	C11orf91 (ENSODEG00000016808)	KIAA1549L (ENSODEG00000017186)	ENSODEG00000017088
Degu	MODERN SPECIES	89	ENSODEG00000012686	ENSODEG00000013089	ENSODEG00000011678	ENSODEG00000011363	RPRD2 (ENSODEG00000012617)	TARS2 (ENSODEG00000011883)	ECM1 (ENSODEG00000011744)	ENSODEG00000013487	ENSODEG00000011170	GOLPH3L (ENSODEG00000011029)	HORMAD1 (ENSODEG00000012417)	CTSS (ENSODEG00000010580)	ENSODEG00000012573	ENSODEG00000011559	ENSODEG00000012445	ENSODEG00000012710 #22	SETDB1 (ENSODEG00000012471)	CERS2 (ENSODEG00000012022)	ANXA9 (ENSODEG00000011014)	MINDY1 (ENSODEG00000010980)	PRUNE1 (ENSODEG00000010818)	BNIPL (ENSODEG00000011106)	C1orf56 (ENSODEG00000010338)	CDC42SE1 (ENSODEG00000010472)	ENSODEG00000012396	GABPB2 (ENSODEG00000010710)	SEMA6C (ENSODEG00000011548)	TNFAIP8L2 (ENSODEG00000011478)	LYSMD1 (ENSODEG00000011246)	SCNM1 (ENSODEG00000013925)	TMOD4 (ENSODEG00000014977)
Degu	MODERN SPECIES	65	ENSODEG00000008981 #12	ENSODEG00000019398	TULP4 (ENSODEG00000007452) #13	ENSODEG00000007461 #14	ENSODEG00000007702 #15	SYTL3 (ENSODEG00000007102) #16	ENSODEG00000009659 #17	ENSODEG00000006754	ENSODEG00000007168	RSPH3 (ENSODEG00000006702) #18	TAGAP (ENSODEG00000007094) #19	ENSODEG00000009689	FNDC1 (ENSODEG00000007591) #20	ENSODEG00000019436	TCF21 (ENSODEG00000007820) #21	ENSODEG00000006582 #22	SLC2A12 (ENSODEG00000007816) #23	ENSODEG00000006585 #24	ALDH8A1 (ENSODEG00000007514) #25	HBS1L (ENSODEG00000008959) #26	ENSODEG00000008684 #27	ENSODEG00000019597	ENSODEG00000006953	ENSODEG00000007137	PDE7B (ENSODEG00000007023) #29	MTFR2 (ENSODEG00000006976) #30	ENSODEG00000006806 #31	MAP7 (ENSODEG00000008448) #32	ENSODEG00000008040 #33	ENSODEG00000008240 #34	SLC35D3 (ENSODEG00000006620) #35
Long-tailed chinchilla	MODERN SPECIES	146	SNX9 (ENSCLAG00000007699) #9	SYNJ2 (ENSCLAG00000004730) #10	SERAC1 (ENSCLAG00000003073) #11	GTF2H5 (ENSCLAG00000003027) #12	TULP4 (ENSCLAG00000002468) #13	TMEM181 (ENSCLAG00000002191) #14	DYNLT1 (ENSCLAG00000002086) #15	SYTL3 (ENSCLAG00000004030) #16	EZR (ENSCLAG00000003081) #17	ENSCLAG00000002792	RSPH3 (ENSCLAG00000002659) #18	TAGAP (ENSCLAG00000002626) #19	FNDC1 (ENSCLAG00000007668) #20	ENSCLAG00000006768	TCF21 (ENSCLAG00000003324) #21	TBPL1 (ENSCLAG00000003071) #22	SLC2A12 (ENSCLAG00000002848) #23	SGK1 (ENSCLAG00000006128) #24	ALDH8A1 (ENSCLAG00000005380) #25	HBS1L (ENSCLAG00000004937) #26	MYB (ENSCLAG00000005675) #27	AHI1 (ENSCLAG00000003003) #28	PDE7B (ENSCLAG00000007039) #29	MTFR2 (ENSCLAG00000005292) #30	BCLAF1 (ENSCLAG00000004401) #31	ENSCLAG00000003926 #32	ENSCLAG00000012716	MAP3K5 (ENSCLAG00000007503) #33	PEX7 (ENSCLAG00000003272) #34	SLC35D3 (ENSCLAG00000003234) #35
Naked mole-rat female	MODERN SPECIES		GJA1 (ENSHGLG00000047888)	TBC1D32 (ENSHGLG00000001631)	ENSHGLG00000001744	ENSHGLG00000002141	MAN1A1 (ENSHGLG00000002233)	FAM184A (ENSHGLG00000002320)	ENSHGLG00000039943	MCM9 (ENSHGLG00000002805)	PLN (ENSHGLG00000050941)	CEP85L (ENSHGLG00000003335)	ENSHGLG00000035822	ENSHGLG00000003172	ENSHGLG00000032159	ENSHGLG00000040407	TCF21 (ENSHGLG00000035092) #21	ENSHGLG00000046831 #22	SLC2A12 (ENSHGLG00000000953) #23	ENSHGLG00000019010	SGK1 (ENSHGLG00000000909) #24	ALDH8A1 (ENSHGLG00000000876) #25	HBS1L (ENSHGLG00000000516) #26	MYB (ENSHGLG00000000878) #27	AHI1 (ENSHGLG00000003261) #28	ENSHGLG00000002954	PDE7B (ENSHGLG00000048791) #29	ENSHGLG00000000549 #30	BCLAF1 (ENSHGLG00000001879) #31	MAP7 (ENSHGLG00000000995) #32	MAP3K5 (ENSHGLG00000000842) #33	ENSHGLG00000035518	PEX7 (ENSHGLG00000000229) #34
Sciuridae	ANCESTRAL SPECIES	1	ENSGT00940000161306	ENSGT00940000160273	ENSGT00940000160008	ENSGT00940000161258	ENSGT00940000162730	ENSGT00940000163260	ENSGT00940000161475	ENSGT00950000182934.a.b	ENSGT00390000013823.b.c.a.a	ENSGT00390000013823.b.c.b	ENSGT00390000013823.b.c.a.b	ENSGT00940000156674	ENSGT00390000018318.u.b.a.a	ENSGT00950000182978.A.a.a	ENSGT00940000160174 #21	ENSGT00940000155712 #22	ENSGT00940000159614 #23	ENSGT00940000155726 #24	ENSGT00940000156799 #25	ENSGT00940000156274 #26	ENSGT00650000094590	ENSGT00940000156248 #27	ENSGT00940000156509 #28	ENSGT00940000159413 #29	ENSGT00950000183215.c.a.a #30	ENSGT00950000183163.a.b #31	ENSGT00950000182941.a.a.a #32	ENSGT00940000159155 #33	ENSGT00940000157264 #34	ENSGT00940000160083 #35	ENSGT00940000157314.A #36
Marmotini	ANCESTRAL SPECIES	11	ENSGT01000000214440.A.a.b.b	ENSGT00940000162919	ENSGT00940000161306	ENSGT00940000160273	ENSGT00940000161258	ENSGT00940000162730	ENSGT00940000163260	ENSGT00940000161475	ENSGT00950000182934.a.b	ENSGT00390000013823.b.c.a.a	ENSGT00390000013823.b.c.a.b	ENSGT00940000156674	ENSGT00390000018318.u.b.a.b.a.b	ENSGT00950000182978.A.a.a	ENSGT00940000160174 #21	ENSGT00940000155712 #22	ENSGT00940000159614 #23	ENSGT00940000155726 #24	ENSGT00940000156799 #25	ENSGT00940000156274 #26	ENSGT00940000156248 #27	ENSGT00940000156509 #28	ENSGT00940000163252.d	ENSGT00940000159413 #29	ENSGT00950000183215.c.a.a #30	ENSGT00950000183163.a.b #31	ENSGT00950000182941.a.a.a #32	ENSGT00940000159155 #33	ENSGT00940000157264 #34	ENSGT00940000160083 #35	ENSGT00940000157314.A #36
Marmotini_b	ANCESTRAL SPECIES	59	ENSGT01000000214440.A.a.b.b	ENSGT00940000162919	ENSGT00940000161306	ENSGT00940000160273	ENSGT00940000161258	ENSGT00940000162730	ENSGT00940000163260	ENSGT00940000161475	ENSGT00950000182934.a.b	ENSGT00390000013823.b.c.a.a	ENSGT00390000013823.b.c.a.b	ENSGT00940000156674	ENSGT00390000018318.u.b.a.a	ENSGT00950000182978.A.a.a	ENSGT00940000160174 #21	ENSGT00940000155712 #22	ENSGT00940000159614 #23	ENSGT00940000155726 #24	ENSGT00940000156799 #25	ENSGT00940000156274 #26	ENSGT00940000156248 #27	ENSGT00940000156509 #28	ENSGT00940000163252.d	ENSGT00940000159413 #29	ENSGT00950000183215.c.a.a #30	ENSGT00950000183163.a.b #31	ENSGT00950000182941.a.a.a #32	ENSGT00940000159155 #33	ENSGT00940000157264 #34	ENSGT00940000160083 #35	ENSGT00940000157314.A #36
Arctic ground squirrel	MODERN SPECIES	94															ENSUPAG00010002212 #21	TBPL1 (ENSUPAG00010002221) #22	SLC2A12 (ENSUPAG00010002225) #23	ENSUPAG00010002240 #24	ENSUPAG00010002482 #25	MYB (ENSUPAG00010002637) #27	AHI1 (ENSUPAG00010002656) #28	PDE7B (ENSUPAG00010002707) #29	ENSUPAG00010002749	MTFR2 (ENSUPAG00010002758) #30	BCLAF1 (ENSUPAG00010002788) #31	MAP7 (ENSUPAG00010002836) #32	MAP3K5 (ENSUPAG00010002902) #33	PEX7 (ENSUPAG00010003051) #34	SLC35D3 (ENSUPAG00010003080) #35	IL20RA (ENSUPAG00010003082) #36	IL22RA2 (ENSUPAG00010003105) #37
Squirrel	MODERN SPECIES	160	CCN2 (ENSSTOG00000020335)	MOXD1 (ENSSTOG00000010377)	STX7 (ENSSTOG00000026119)	TAAR8 (ENSSTOG00000005542)	TAAR5 (ENSSTOG00000003481)	ENSSTOG00000023463	ENSSTOG00000025894	TAAR2 (ENSSTOG00000029881)	TAAR1 (ENSSTOG00000031624)	VNN1 (ENSSTOG00000007336)	ENSSTOG00000009354	SLC18B1 (ENSSTOG00000009373)	ENSSTOG00000031770	EYA4 (ENSSTOG00000005069)	TCF21 (ENSSTOG00000023733) #21	TBPL1 (ENSSTOG00000006786) #22	SLC2A12 (ENSSTOG00000027759) #23	SGK1 (ENSSTOG00000028424) #24	ALDH8A1 (ENSSTOG00000007535) #25	HBS1L (ENSSTOG00000007551) #26	MYB (ENSSTOG00000007581) #27	AHI1 (ENSSTOG00000007607) #28	PDE7B (ENSSTOG00000020095) #29	ENSSTOG00000021413	MTFR2 (ENSSTOG00000013967) #30	BCLAF1 (ENSSTOG00000013977) #31	MAP7 (ENSSTOG00000008977) #32	MAP3K5 (ENSSTOG00000009007) #33	PEX7 (ENSSTOG00000025283) #34	SLC35D3 (ENSSTOG00000025129) #35	IL20RA (ENSSTOG00000016256) #36
Alpin marmot	MODERN SPECIES	2	TAAR9 (ENSMMMG00000018297)	TAAR8 (ENSMMMG00000018304)	ENSMMMG00000018309	TAAR5 (ENSMMMG00000018321)	ENSMMMG00000018326	ENSMMMG00000018329	TAAR2 (ENSMMMG00000018331)	TAAR1 (ENSMMMG00000018341)	VNN1 (ENSMMMG00000018344)	ENSMMMG00000018356	ENSMMMG00000018365	SLC18B1 (ENSMMMG00000018367)	ENSMMMG00000018382	EYA4 (ENSMMMG00000018511)	TCF21 (ENSMMMG00000018609) #21	TBPL1 (ENSMMMG00000018642) #22	SLC2A12 (ENSMMMG00000018652) #23	SGK1 (ENSMMMG00000018673) #24	ENSMMMG00000018939	ALDH8A1 (ENSMMMG00000019004) #25	HBS1L (ENSMMMG00000019006) #26	MYB (ENSMMMG00000019066) #27	AHI1 (ENSMMMG00000019073) #28	PDE7B (ENSMMMG00000019089) #29	ENSMMMG00000019117	MTFR2 (ENSMMMG00000019120) #30	BCLAF1 (ENSMMMG00000019134) #31	MAP7 (ENSMMMG00000019204) #32	MAP3K5 (ENSMMMG00000019235) #33	PEX7 (ENSMMMG00000019290) #34	IL20RA (ENSMMMG00000019314) #36
Eurasian red squirrel	MODERN SPECIES	16	TAAR6 (ENSSVLG00005010525)	TAAR5 (ENSSVLG00005010507)	ENSSVLG00005010494	ENSSVLG00005010481	TAAR2 (ENSSVLG00005010460)	TAAR1 (ENSSVLG00005010449)	VNN1 (ENSSVLG00005010391)	ENSSVLG00005010280	ENSSVLG00005010220	ENSSVLG00005010191	SLC18B1 (ENSSVLG00005010095)	ENSSVLG00005010015	EYA4 (ENSSVLG00005009017)	ENSSVLG00005008727	TCF21 (ENSSVLG00005008705) #21	TBPL1 (ENSSVLG00005008655) #22	SLC2A12 (ENSSVLG00005008629) #23	SGK1 (ENSSVLG00005008322) #24	ENSSVLG00005008214	ALDH8A1 (ENSSVLG00005008086) #25	ENSSVLG00005008038 #26	ENSSVLG00005007995	MYB (ENSSVLG00005007375) #27	AHI1 (ENSSVLG00005007162) #28	PDE7B (ENSSVLG00005007033) #29	ENSSVLG00005006924 #30	ENSSVLG00005006663 #31	ENSSVLG00005006545	ENSSVLG00005006526	ENSSVLG00005006502	ENSSVLG00005006489
Rodentia_B	ANCESTRAL SPECIES	18	ENSGT00940000160273	ENSGT00940000161306	ENSGT00940000160008	ENSGT00940000161258	ENSGT00940000162730	ENSGT00940000163260	ENSGT00940000161475	ENSGT00950000182934.a.b	ENSGT00390000013823.b.c.a.a	ENSGT00390000013823.b.c.b	ENSGT00940000156674	ENSGT00390000018318.u.b.b	ENSGT00390000018318.u.a	ENSGT00950000182978.A.a.a	ENSGT00940000160174 #21	ENSGT00940000155712 #22	ENSGT00940000159614 #23	ENSGT00940000155726 #24	ENSGT00940000156799 #25	ENSGT00940000156274 #26	ENSGT00650000094590	ENSGT00940000156248 #27	ENSGT00940000156509 #28	ENSGT00940000159413 #29	ENSGT00950000183215.c.a.a #30	ENSGT00950000183163.a.b #31	ENSGT00950000182941.a.a.a #32	ENSGT00940000159155 #33	ENSGT00940000157264 #34	ENSGT00940000160083 #35	ENSGT00940000157314.A #36
Myomorpha	ANCESTRAL SPECIES	21	ENSGT00940000162919	ENSGT00940000160273	ENSGT00940000161306	ENSGT00940000161258	ENSGT00940000162730	ENSGT00940000163260	ENSGT00940000161475	ENSGT00950000182934.a.b	ENSGT00390000013823.b.c.a.a	ENSGT00390000013823.b.c.b	ENSGT00940000156674	ENSGT00390000018318.u.b.b	ENSGT00390000018318.u.a	ENSGT00950000182978.A.a.a	ENSGT00940000160174 #21	ENSGT00940000155712 #22	ENSGT00940000159614 #23	ENSGT00940000155726 #24	ENSGT00940000156799 #25	ENSGT00940000156274 #26	ENSGT00650000094590	ENSGT00940000156248 #27	ENSGT00940000156509 #28	ENSGT00940000159413 #29	ENSGT00950000183215.c.a.a #30	ENSGT00950000183163.a.b #31	ENSGT00950000182941.a.a.a #32	ENSGT00940000159155 #33	ENSGT00940000157264 #34	ENSGT00940000160083 #35	ENSGT00940000157314.A #36
Muroidea	ANCESTRAL SPECIES	22	ENSGT00940000162919	ENSGT00940000160273	ENSGT00940000161306	ENSGT00940000161258	ENSGT00940000162730	ENSGT00940000163260	ENSGT00940000161475	ENSGT00950000182934.a.b	ENSGT00390000013823.b.c.a.a	ENSGT00390000013823.b.c.b	ENSGT00940000156674	ENSGT00390000018318.u.b.b	ENSGT00390000018318.u.a	ENSGT00950000182978.A.a.a	ENSGT00940000160174 #21	ENSGT00940000155712 #22	ENSGT00940000159614 #23	ENSGT00940000155726 #24	ENSGT00940000156799 #25	ENSGT00940000156274 #26	ENSGT00650000094590	ENSGT00940000156248 #27	ENSGT00940000156509 #28	ENSGT00940000159413 #29	ENSGT00950000183215.c.a.a #30	ENSGT00950000183163.a.b #31	ENSGT00950000182941.a.a.a #32	ENSGT00940000159155 #33	ENSGT00940000157264 #34	ENSGT00940000160083 #35	ENSGT00940000157314.A #36
Muroidea_A	ANCESTRAL SPECIES	11	ENSGT00940000162919	ENSGT00940000160273	ENSGT00940000161306	ENSGT00940000161258	ENSGT00940000162730	ENSGT00940000163260	ENSGT00940000161475	ENSGT00950000182934.a.b	ENSGT00390000013823.b.c.a.a	ENSGT00390000013823.b.c.b	ENSGT00940000156674	ENSGT00390000018318.u.b.b	ENSGT00390000018318.u.a	ENSGT00950000182978.A.a.a	ENSGT00940000160174 #21	ENSGT00940000155712 #22	ENSGT00940000159614 #23	ENSGT00940000155726 #24	ENSGT00950000183442	ENSGT00940000156799 #25	ENSGT00940000156274 #26	ENSGT00650000094590	ENSGT00940000156248 #27	ENSGT00940000156509 #28	ENSGT00940000159413 #29	ENSGT00950000183215.c.a.a #30	ENSGT00950000183163.a.b #31	ENSGT00950000182941.a.a.a #32	ENSGT00940000159155 #33	ENSGT00940000157264 #34	ENSGT00940000160083 #35
Murinae	ANCESTRAL SPECIES	30	ENSGT00940000160273.m.a	ENSGT00940000160273.n	ENSGT00940000161306	ENSGT00940000161258	ENSGT00940000162730	ENSGT00940000163260	ENSGT00940000161475	ENSGT00950000182934.a.b	ENSGT00390000013823.b.c.a.a	ENSGT00390000013823.b.c.b	ENSGT00940000156674	ENSGT00390000018318.u.a.b	ENSGT00950000182978.A.a.a	ENSGT00940000160174 #21	ENSGT01050000248247	ENSGT00940000155712 #22	ENSGT00940000159614 #23	ENSGT00940000155726 #24	ENSGT00950000183442	ENSGT01050000248461	ENSGT00940000156799 #25	ENSGT00940000156274 #26	ENSGT00940000156248 #27	ENSGT00940000156509 #28	ENSGT00940000159413 #29	ENSGT00950000183215.c.a.a #30	ENSGT00950000183163.a.b #31	ENSGT00950000182941.a.a.a #32	ENSGT00940000159155 #33	ENSGT00940000157264 #34	ENSGT00940000160083 #35
Mus	ANCESTRAL SPECIES	15	ENSGT01000000214440.A.a.b.b	ENSGT00940000162919	ENSGT00940000161306	ENSGT00940000161258	ENSGT00940000162730	ENSGT00940000163260	ENSGT00940000161475	ENSGT00950000182934.a.b	ENSGT00390000013823.b.c.a.a	ENSGT00390000013823.b.c.b	ENSGT00940000156674	ENSGT00390000018318.u.a.b	ENSGT00950000182978.A.a.a	ENSGT00940000160174 #21	ENSGT01050000248247	ENSGT00940000155712 #22	ENSGT00940000159614 #23	ENSGT00940000155726 #24	ENSGT00950000183442	ENSGT00940000156799 #25	ENSGT00650000094590	ENSGT00940000156274 #26	ENSGT00940000156248 #27	ENSGT00940000156509 #28	ENSGT00940000159413 #29	ENSGT00950000183215.c.a.a #30	ENSGT00950000183163.a.b #31	ENSGT00900000143307	ENSGT00950000182941.a.a.a #32	ENSGT00940000159155 #33	ENSGT00940000157264 #34
Mus_A	ANCESTRAL SPECIES	11	ENSGT00940000160273.n	ENSGT00940000161306.p	ENSGT00940000161258	ENSGT00940000162730	ENSGT00940000163260	ENSGT00940000161475	ENSGT00950000182934.a.b	ENSGT00390000013823.b.c.a.a	ENSGT00390000013823.b.c.b	ENSGT00940000156674	ENSGT00390000018318.u.b.b	ENSGT00390000018318.u.a.b	ENSGT00950000182978.A.a.a	ENSGT00940000160174 #21	ENSGT01050000248247	ENSGT00940000155712 #22	ENSGT00940000159614 #23	ENSGT00940000155726 #24	ENSGT00950000183442	ENSGT00940000156799 #25	ENSGT00650000094590	ENSGT00940000156274 #26	ENSGT00940000156248 #27	ENSGT00940000156509 #28	ENSGT00940000159413 #29	ENSGT00950000183215.c.a.a #30	ENSGT00950000183163.a.b #31	ENSGT00900000143307	ENSGT00950000182941.a.a.a #32	ENSGT00940000159155 #33	ENSGT00940000157264 #34
Mus_B	ANCESTRAL SPECIES	10	ENSGT00940000160273.m.a.a.a.b	ENSGT00940000160273.m.a.a.a.a	ENSGT00940000161306.p	ENSGT00940000161258	ENSGT00940000162730	ENSGT00940000163260	ENSGT00940000161475	ENSGT00950000182934.a.b	ENSGT00390000013823.b.c.a.a	ENSGT00390000013823.b.c.b	ENSGT00940000156674	ENSGT00390000018318.u.a.b	ENSGT00950000182978.A.a.a	ENSGT00940000160174 #21	ENSGT01050000248247	ENSGT00940000155712 #22	ENSGT00940000159614 #23	ENSGT00940000155726 #24	ENSGT00950000183442	ENSGT00940000156799 #25	ENSGT00650000094590	ENSGT00940000156274 #26	ENSGT00940000156248 #27	ENSGT00940000156509 #28	ENSGT00940000159413 #29	ENSGT00950000183215.c.a.a #30	ENSGT00950000183163.a.b #31	ENSGT00900000143307	ENSGT00950000182941.a.a.a #32	ENSGT00940000159155 #33	ENSGT00940000157264 #34
Mouse	MODERN SPECIES	1	Taar7b (ENSMUSG00000095171)	Taar7a (ENSMUSG00000095647)	Taar6 (ENSMUSG00000045111)	Taar5 (ENSMUSG00000069706)	Taar4 (ENSMUSG00000069707)	Taar3 (ENSMUSG00000069708)	Taar2 (ENSMUSG00000059763)	Taar1 (ENSMUSG00000056379)	Vnn1 (ENSMUSG00000037440)	Vnn3 (ENSMUSG00000020010)	Slc18b1 (ENSMUSG00000037455)	Rps12 (ENSMUSG00000061983)	Eya4 (ENSMUSG00000010461)	Tcf21 (ENSMUSG00000045680) #21	Gm56675 (ENSMUSG00000118528)	Tbpl1 (ENSMUSG00000071359) #22	Slc2a12 (ENSMUSG00000037490) #23	Raet1d (ENSMUSG00000078452)	H60b (ENSMUSG00000075297)	Raet1e (ENSMUSG00000053219)	Semp2l2b (ENSMUSG00000069712)	Sgk1 (ENSMUSG00000019970) #24	1700020N01Rik (ENSMUSG00000050844)	Aldh8a1 (ENSMUSG00000037542) #25	Hbs1l (ENSMUSG00000019977) #26	Myb (ENSMUSG00000019982) #27	Ahi1 (ENSMUSG00000019986) #28	Pde7b (ENSMUSG00000019990) #29	Mtfr2 (ENSMUSG00000019992) #30	Bclaf1 (ENSMUSG00000037608) #31	Map7 (ENSMUSG00000019996) #32
Mus_C	ANCESTRAL SPECIES	7	ENSGT00940000160273.m.a.a.b.a	ENSGT00940000160273.m.a.a.a.b	ENSGT00940000160273.m.a.a.a.a	ENSGT00940000161306.p	ENSGT00940000161258	ENSGT00940000162730	ENSGT00940000163260	ENSGT00940000161475	ENSGT00950000182934.a.b	ENSGT00390000013823.b.c.a.a	ENSGT00390000013823.b.c.b	ENSGT00940000156674	ENSGT00390000018318.u.a.b	ENSGT00950000182978.A.a.a	ENSGT00940000160174 #21	ENSGT00940000155712 #22	ENSGT00940000159614 #23	ENSGT00940000155726 #24	ENSGT00950000183442	ENSGT00940000156799 #25	ENSGT00650000094590	ENSGT00940000156274 #26	ENSGT00940000156248 #27	ENSGT00940000156509 #28	ENSGT00940000159413 #29	ENSGT00950000183215.c.a.a #30	ENSGT00950000183163.a.b #31	ENSGT00900000143307	ENSGT00950000182941.a.a.a #32	ENSGT00940000159155 #33	ENSGT00940000157264 #34
Steppe mouse	DUPLICATION
Steppe mouse	MODERN SPECIES	2819														Eya4 (ENSMSIG00000021698)	Tcf21 (ENSMSIG00000021676) #21	ENSMSIG00000021633 #22	Slc2a12 (ENSMSIG00000021623) #23
Steppe mouse	MODERN SPECIES	935															ENSMSIG00000008009	ENSMSIG00000008015 #22
spretus	MODERN SPECIES	1	MGP_SPRETEiJ_G0015992	MGP_SPRETEiJ_G0015991	MGP_SPRETEiJ_G0015990	Taar6 (MGP_SPRETEiJ_G0015989)	Taar5 (MGP_SPRETEiJ_G0015988)	Taar4 (MGP_SPRETEiJ_G0015987)	Taar3 (MGP_SPRETEiJ_G0015986)	Taar2 (MGP_SPRETEiJ_G0015985)	Taar1 (MGP_SPRETEiJ_G0015984)	Vnn1 (MGP_SPRETEiJ_G0015983)	Vnn3 (MGP_SPRETEiJ_G0015982)	Slc18b1 (MGP_SPRETEiJ_G0015981)	MGP_SPRETEiJ_G0015980	Eya4 (MGP_SPRETEiJ_G0015979)	Tcf21 (MGP_SPRETEiJ_G0015977) #21	Tbpl1 (MGP_SPRETEiJ_G0015976) #22	Slc2a12 (MGP_SPRETEiJ_G0015975) #23	Sgk1 (MGP_SPRETEiJ_G0015974) #24	1700020N01Rik (MGP_SPRETEiJ_G0015973)	Aldh8a1 (MGP_SPRETEiJ_G0015972) #25	MGP_SPRETEiJ_G0015971	Hbs1l (MGP_SPRETEiJ_G0015970) #26	Myb (MGP_SPRETEiJ_G0015969) #27	MGP_SPRETEiJ_G0015968 #28	Pde7b (MGP_SPRETEiJ_G0015967) #29	MGP_SPRETEiJ_G0015966 #30	Bclaf1 (MGP_SPRETEiJ_G0015965) #31	MGP_SPRETEiJ_G0015964	Map7 (MGP_SPRETEiJ_G0015963) #32	Map3k5 (MGP_SPRETEiJ_G0015962) #33	Pex7 (MGP_SPRETEiJ_G0015961) #34
Ryukyu mouse	MODERN SPECIES	1	MGP_CAROLIEiJ_G0015184	Taar7e (MGP_CAROLIEiJ_G0015182)	Taar7b (MGP_CAROLIEiJ_G0015181)	Taar6 (MGP_CAROLIEiJ_G0015180)	Taar5 (MGP_CAROLIEiJ_G0015179)	Taar4 (MGP_CAROLIEiJ_G0015178)	Taar3 (MGP_CAROLIEiJ_G0015177)	Taar2 (MGP_CAROLIEiJ_G0015176)	Taar1 (MGP_CAROLIEiJ_G0015175)	Vnn1 (MGP_CAROLIEiJ_G0015174)	Vnn3 (MGP_CAROLIEiJ_G0015173)	Slc18b1 (MGP_CAROLIEiJ_G0015172)	Rps12 (MGP_CAROLIEiJ_G0015171)	Eya4 (MGP_CAROLIEiJ_G0015170)	Tcf21 (MGP_CAROLIEiJ_G0015169) #21	Tbpl1 (MGP_CAROLIEiJ_G0015168) #22	Slc2a12 (MGP_CAROLIEiJ_G0015167) #23	Sgk1 (MGP_CAROLIEiJ_G0015166) #24	1700020N01Rik (MGP_CAROLIEiJ_G0015165)	Aldh8a1 (MGP_CAROLIEiJ_G0015164) #25	MGP_CAROLIEiJ_G0015163	Hbs1l (MGP_CAROLIEiJ_G0015162) #26	Myb (MGP_CAROLIEiJ_G0015161) #27	Ahi1 (MGP_CAROLIEiJ_G0015160) #28	Pde7b (MGP_CAROLIEiJ_G0015159) #29	Mtfr2 (MGP_CAROLIEiJ_G0015158) #30	Bclaf1 (MGP_CAROLIEiJ_G0015157) #31	MGP_CAROLIEiJ_G0015156	Map7 (MGP_CAROLIEiJ_G0015155) #32	Map3k5 (MGP_CAROLIEiJ_G0015154) #33	Pex7 (MGP_CAROLIEiJ_G0015153) #34
Shrew mouse	MODERN SPECIES	13	MGP_PahariEiJ_G0023803	MGP_PahariEiJ_G0023802	MGP_PahariEiJ_G0023801	Taar6 (MGP_PahariEiJ_G0023800)	Taar5 (MGP_PahariEiJ_G0023799)	Taar4 (MGP_PahariEiJ_G0023798)	Taar3 (MGP_PahariEiJ_G0023797)	Taar2 (MGP_PahariEiJ_G0023796)	Taar1 (MGP_PahariEiJ_G0023795)	Vnn1 (MGP_PahariEiJ_G0023794)	Vnn3 (MGP_PahariEiJ_G0023793)	Slc18b1 (MGP_PahariEiJ_G0023792)	MGP_PahariEiJ_G0023791	Eya4 (MGP_PahariEiJ_G0023790)	Tcf21 (MGP_PahariEiJ_G0023789) #21	Tbpl1 (MGP_PahariEiJ_G0023788) #22	Slc2a12 (MGP_PahariEiJ_G0023787) #23	Sgk1 (MGP_PahariEiJ_G0023786) #24	1700020N01Rik (MGP_PahariEiJ_G0023785)	Aldh8a1 (MGP_PahariEiJ_G0023784) #25	MGP_PahariEiJ_G0023783	Hbs1l (MGP_PahariEiJ_G0023782) #26	Myb (MGP_PahariEiJ_G0023781) #27	Ahi1 (MGP_PahariEiJ_G0023780) #28	Pde7b (MGP_PahariEiJ_G0023779) #29	Mtfr2 (MGP_PahariEiJ_G0023778) #30	MGP_PahariEiJ_G0023777 #31	MGP_PahariEiJ_G0023776	Map7 (MGP_PahariEiJ_G0023775) #32	Map3k5 (MGP_PahariEiJ_G0023774) #33	Pex7 (MGP_PahariEiJ_G0023773) #34
Rat	MODERN SPECIES		Taar7a (ENSRNOG00000062468)	Taar6 (ENSRNOG00000016089)	Taar5 (ENSRNOG00000039869)	Taar4 (ENSRNOG00000029877)	Taar3 (ENSRNOG00000025982)	ENSRNOG00000063281	Taar2 (ENSRNOG00000025951)	Taar1 (ENSRNOG00000016073)	Vnn1 (ENSRNOG00000016219)	Vnn3 (ENSRNOG00000039865)	Slc18b1 (ENSRNOG00000016371)	ENSRNOG00000068836	Rps12 (ENSRNOG00000016411)	Eya4 (ENSRNOG00000016627)	Tcf21 (ENSRNOG00000016700) #21	Tbpl1 (ENSRNOG00000066988) #22	Tbpl1 (ENSRNOG00000011114)	Slc2a12 (ENSRNOG00000011161) #23	Sgk1 (ENSRNOG00000011815) #24	LOC108349468 (ENSRNOG00000059251)	ENSRNOG00000067750	ENSRNOG00000067483	Clvs2 (ENSRNOG00000012122)	ENSRNOG00000063690	Trdn (ENSRNOG00000012609)	Nkain2 (ENSRNOG00000029608)	Rnf217 (ENSRNOG00000013323)	Tpd52l1 (ENSRNOG00000021478)	Hddc2 (ENSRNOG00000021442)	ENSRNOG00000063892	Hey2 (ENSRNOG00000013364)
Cricetidae	ANCESTRAL SPECIES	11	ENSGT00530000063085.A.b	ENSGT01000000214440.A.a.b.b	ENSGT00940000162919	ENSGT00940000161306	ENSGT00940000161258	ENSGT00940000162730	ENSGT00940000163260	ENSGT00940000161475	ENSGT00950000182934.a.b	ENSGT00390000013823.b.c.a.a	ENSGT00390000013823.b.c.b	ENSGT00940000156674	ENSGT00390000018318.u.b.b	ENSGT00950000182978.A.a.a	ENSGT00940000160174 #21	ENSGT00940000155712 #22	ENSGT00940000159614 #23	ENSGT00940000155726 #24	ENSGT00950000183442	ENSGT00940000156799 #25	ENSGT00940000156274 #26	ENSGT00650000094590	ENSGT00940000156248.pc #27	ENSGT00940000156509 #28	ENSGT00940000159413 #29	ENSGT00950000183215.c.a.a #30	ENSGT00950000183163.a.b #31	ENSGT00950000182941.a.a.a #32	ENSGT00940000159155 #33	ENSGT00940000157264 #34	ENSGT00940000160083 #35
Cricetinae	ANCESTRAL SPECIES	7	ENSGT01000000214440.A.a.b.b	ENSGT00940000162919	ENSGT00940000160273	ENSGT00940000161306	ENSGT00940000161258	ENSGT00940000162730	ENSGT00940000163260	ENSGT00940000161475	ENSGT00950000182934.a.b	ENSGT00390000013823.b.c.a.a	ENSGT00390000013823.b.c.b	ENSGT00940000156674	ENSGT00390000018318.u.b.b	ENSGT00950000182978.A.a.a	ENSGT00940000160174 #21	ENSGT00940000155712 #22	ENSGT00940000159614 #23	ENSGT00940000155726 #24	ENSGT00950000183442	ENSGT00940000156799 #25	ENSGT00940000156274 #26	ENSGT00940000156248.pc #27	ENSGT00940000156509 #28	ENSGT00940000159413 #29	ENSGT00950000183215.c.a.a #30	ENSGT00950000183163.a.b #31	ENSGT00950000182941.a.a.a #32	ENSGT00940000159155 #33	ENSGT00940000157264 #34	ENSGT00940000160083 #35	ENSGT00940000157314.A #36
Golden Hamster	MODERN SPECIES	621	Enpp1 (ENSMAUG00000018561)	Ccn2 (ENSMAUG00000021049)	Moxd1 (ENSMAUG00000018371)	Stx7 (ENSMAUG00000021847)	ENSMAUG00000007216	Taar6 (ENSMAUG00000006522)	Taar5 (ENSMAUG00000007260)	Taar4 (ENSMAUG00000007382)	Taar3 (ENSMAUG00000010678)	Taar2 (ENSMAUG00000017522)	Taar1 (ENSMAUG00000007196)	Slc18b1 (ENSMAUG00000021274)	ENSMAUG00000016653	Eya4 (ENSMAUG00000020805)	Tcf21 (ENSMAUG00000020633) #21	Tbpl1 (ENSMAUG00000003205) #22	Slc2a12 (ENSMAUG00000008238) #23	Sgk1 (ENSMAUG00000009469) #24	1700020N01Rik (ENSMAUG00000021945)	Aldh8a1 (ENSMAUG00000013904) #25	Hbs1l (ENSMAUG00000001077) #26	Myb (ENSMAUG00000009411) #27	Ahi1 (ENSMAUG00000009566) #28	Pde7b (ENSMAUG00000015483) #29	Mtfr2 (ENSMAUG00000020722) #30	Bclaf1 (ENSMAUG00000020380) #31	Map3k5 (ENSMAUG00000017994) #33	Pex7 (ENSMAUG00000011551) #34	Slc35d3 (ENSMAUG00000019497) #35	Il20ra (ENSMAUG00000009539) #36	Il22ra2 (ENSMAUG00000009499) #37
Chinese hamster chok1gshd	MODERN SPECIES	160	ENSCGRG00001008168	ENSCGRG00001003024	Taar6 (ENSCGRG00001002137)	Taar5 (ENSCGRG00001003908)	Taar4 (ENSCGRG00001001531)	Taar3 (ENSCGRG00001002278)	Taar2 (ENSCGRG00001005730)	Taar1 (ENSCGRG00001002165)	Vnn1 (ENSCGRG00001003959)	Vnn3 (ENSCGRG00001002174)	Slc18b1 (ENSCGRG00001024488)	ENSCGRG00001024190	ENSCGRG00001024088	Eya4 (ENSCGRG00001023342)	Tcf21 (ENSCGRG00001021984) #21	Tbpl1 (ENSCGRG00001021262) #22	Slc2a12 (ENSCGRG00001020778) #23	Hace1 (ENSCGRG00001020322)	ENSCGRG00001016712	ENSCGRG00001001083	ENSCGRG00001016135	Grik2 (ENSCGRG00001014036)	Ascc3 (ENSCGRG00001000918)	Sim1 (ENSCGRG00001018829)	ENSCGRG00001017730
Cricetidae_B	ANCESTRAL SPECIES	21	ENSGT01000000214440.A.a.b.b	ENSGT00940000162919	ENSGT00940000161306	ENSGT00940000161258	ENSGT00940000162730	ENSGT00940000163260	ENSGT00940000161475	ENSGT00950000182934.a.b	ENSGT00390000013823.b.c.a.a	ENSGT00390000013823.b.c.b	ENSGT00940000156674	ENSGT00390000018318.u.b.b	ENSGT00390000018318.u.b.a.b.a.b	ENSGT00950000182978.A.a.a	ENSGT00940000160174 #21	ENSGT00940000155712 #22	ENSGT00940000159614 #23	ENSGT00940000155726 #24	ENSGT00950000183442	ENSGT00940000156799 #25	ENSGT00940000156274 #26	ENSGT00650000094590	ENSGT00940000156248.pc #27	ENSGT00940000156509 #28	ENSGT00940000159413 #29	ENSGT00950000183215.c.a.a #30	ENSGT00950000183163.a.b #31	ENSGT00950000182941.a.a.a #32	ENSGT00940000159155 #33	ENSGT00940000157264 #34	ENSGT00940000160083 #35
Prairie vole	MODERN SPECIES	354	ENSMOCG00000002106	ENSMOCG00000020108	ENSMOCG00000001959	ENSMOCG00000015154	ENSMOCG00000013768	Taar6 (ENSMOCG00000001371)	Taar4 (ENSMOCG00000002182)	Taar2 (ENSMOCG00000022845)	Taar1 (ENSMOCG00000001836)	Vnn1 (ENSMOCG00000014706)	Slc18b1 (ENSMOCG00000011228)	ENSMOCG00000017092	ENSMOCG00000000324	Eya4 (ENSMOCG00000021008)	Tcf21 (ENSMOCG00000016422) #21	Tbpl1 (ENSMOCG00000022781) #22	Slc2a12 (ENSMOCG00000001440) #23	Sgk1 (ENSMOCG00000008011) #24	1700020N01Rik (ENSMOCG00000017055)	Aldh8a1 (ENSMOCG00000013932) #25	Hbs1l (ENSMOCG00000023038) #26	ENSMOCG00000020414	ENSMOCG00000014988 #27	ENSMOCG00000016189 #27	Ahi1 (ENSMOCG00000019913) #28	Pde7b (ENSMOCG00000018081) #29	ENSMOCG00000006744	Mtfr2 (ENSMOCG00000004425) #30	Bclaf1 (ENSMOCG00000005885) #31	Map7 (ENSMOCG00000010774) #32	Map3k5 (ENSMOCG00000019021) #33
Northern American deer mouse	MODERN SPECIES	7	Taar6 (ENSPEMG00000007048)	Taar5 (ENSPEMG00000001325)	Taar4 (ENSPEMG00000015066)	Taar3 (ENSPEMG00000001193)	Taar2 (ENSPEMG00000020995)	Taar1 (ENSPEMG00000022856)	Vnn1 (ENSPEMG00000021340)	Vnn3 (ENSPEMG00000022899)	ENSPEMG00000030044	Slc18b1 (ENSPEMG00000022014)	Rps12 (ENSPEMG00000021483)	Eya4 (ENSPEMG00000018298)	ENSPEMG00000025804	ENSPEMG00000025529	Tcf21 (ENSPEMG00000003503) #21	Tbpl1 (ENSPEMG00000004800) #22	Slc2a12 (ENSPEMG00000006268) #23	Sgk1 (ENSPEMG00000009727) #24	1700020N01Rik (ENSPEMG00000011791)	Aldh8a1 (ENSPEMG00000013721) #25	Hbs1l (ENSPEMG00000014369) #26	ENSPEMG00000024833	Myb (ENSPEMG00000000233) #27	Ahi1 (ENSPEMG00000007907) #28	ENSPEMG00000010391	Pde7b (ENSPEMG00000013435) #29	Mtfr2 (ENSPEMG00000017505) #30	ENSPEMG00000029424	Map7 (ENSPEMG00000006441) #32	Map3k5 (ENSPEMG00000015212) #33	Pex7 (ENSPEMG00000021366) #34
Upper Galilee mountains blind mole rat	MODERN SPECIES	1789	ENSNGAG00000015396	ENSNGAG00000000958	ENSNGAG00000016115	Taar6 (ENSNGAG00000015502)	Taar5 (ENSNGAG00000016752)	Taar4 (ENSNGAG00000016543)	Taar3 (ENSNGAG00000016369)	Taar2 (ENSNGAG00000007492)	Taar1 (ENSNGAG00000016686)	Vnn1 (ENSNGAG00000000525)	Slc18b1 (ENSNGAG00000001177)	ENSNGAG00000017824	ENSNGAG00000008061	Eya4 (ENSNGAG00000014955)	Tcf21 (ENSNGAG00000010530) #21	Tbpl1 (ENSNGAG00000002735) #22	Slc2a12 (ENSNGAG00000015437) #23	Sgk1 (ENSNGAG00000017569) #24	Aldh8a1 (ENSNGAG00000009983) #25	Hbs1l (ENSNGAG00000015184) #26	Myb (ENSNGAG00000006199) #27	Ahi1 (ENSNGAG00000017747) #28	Pde7b (ENSNGAG00000010650) #29	Mtfr2 (ENSNGAG00000001241) #30	Bclaf1 (ENSNGAG00000016813) #31	Map7 (ENSNGAG00000019743) #32	Map3k5 (ENSNGAG00000000561) #33	Pex7 (ENSNGAG00000018527) #34	Slc35d3 (ENSNGAG00000015318) #35	Il20ra (ENSNGAG00000005056) #36	ENSNGAG00000012948
Lesser Egyptian jerboa	DUPLICATION
Lesser Egyptian jerboa	DUPLICATION
Lesser Egyptian jerboa	MODERN SPECIES	89	ENSJJAG00000004937	Cpne8 (ENSJJAG00000015994)	Kif21a (ENSJJAG00000001646)	Abcd2 (ENSJJAG00000006865)	ENSJJAG00000000818	Slc2a13 (ENSJJAG00000021456)	Lrrk2 (ENSJJAG00000013233)	Cntn1 (ENSJJAG00000021782)	ENSJJAG00000015792	ENSJJAG00000013828	Pdzrn4 (ENSJJAG00000000770)	ENSJJAG00000023385	ENSJJAG00000020445	Gxylt1 (ENSJJAG00000010228)	Yaf2 (ENSJJAG00000000324)	ENSJJAG00000023606 #22	ENSJJAG00000021636	ENSJJAG00000014487	Prickle1 (ENSJJAG00000011701)
Lesser Egyptian jerboa	MODERN SPECIES	223												Trappc9 (ENSJJAG00000016725)	Chrac1 (ENSJJAG00000017631)	Ago2 (ENSJJAG00000018712)	Ptk2 (ENSJJAG00000004391)	ENSJJAG00000010072 #22	Dennd3 (ENSJJAG00000011270)	Slc45a4 (ENSJJAG00000013200)	ENSJJAG00000013106	Gpr20 (ENSJJAG00000011714)	Ptp4a3 (ENSJJAG00000013243)	ENSJJAG00000013660	Gm6569 (ENSJJAG00000018857)	ENSJJAG00000019004	ENSJJAG00000019212
Lesser Egyptian jerboa	MODERN SPECIES	44	Moxd1 (ENSJJAG00000003293)	Stx7 (ENSJJAG00000019231)	ENSJJAG00000002023	Taar5 (ENSJJAG00000017753)	Taar4 (ENSJJAG00000002217)	Taar3 (ENSJJAG00000003037)	Taar2 (ENSJJAG00000022531)	ENSJJAG00000002766	Vnn1 (ENSJJAG00000023296)	Vnn3 (ENSJJAG00000013692)	Slc18b1 (ENSJJAG00000012667)	ENSJJAG00000004347	ENSJJAG00000006059	Eya4 (ENSJJAG00000012851)	Tcf21 (ENSJJAG00000010513) #21	ENSJJAG00000007350 #22	Slc2a12 (ENSJJAG00000003595) #23	Sgk1 (ENSJJAG00000003911) #24	ENSJJAG00000009072	Aldh8a1 (ENSJJAG00000014136) #25	ENSJJAG00000017024 #26	Myb (ENSJJAG00000023989) #27	Ahi1 (ENSJJAG00000010372) #28	Pde7b (ENSJJAG00000001518) #29	Bclaf1 (ENSJJAG00000011803) #31	Map7 (ENSJJAG00000023344) #32	ENSJJAG00000012639 #33	Pex7 (ENSJJAG00000016195) #34	Slc35d3 (ENSJJAG00000014674) #35	Il20ra (ENSJJAG00000019171) #36	Il22ra2 (ENSJJAG00000007140) #37
Kangaroo rat	MODERN SPECIES	416	Moxd1 (ENSDORG00000015278)	Stx7 (ENSDORG00000015279)	ENSDORG00000024418	ENSDORG00000012351	ENSDORG00000016520	Taar5 (ENSDORG00000011615)	Taar4 (ENSDORG00000029458)	Taar2 (ENSDORG00000014649)	Taar1 (ENSDORG00000014650)	Vnn1 (ENSDORG00000013713)	Vnn3 (ENSDORG00000006399)	Slc18b1 (ENSDORG00000016669)	ENSDORG00000016670	Eya4 (ENSDORG00000009832)	Tcf21 (ENSDORG00000028001) #21	Tbpl1 (ENSDORG00000026809) #22	Slc2a12 (ENSDORG00000001098) #23	Sgk1 (ENSDORG00000006576) #24	Aldh8a1 (ENSDORG00000012210) #25	Hbs1l (ENSDORG00000005958) #26	Myb (ENSDORG00000005960) #27	Ahi1 (ENSDORG00000005963) #28	Pde7b (ENSDORG00000011723) #29	Mtfr2 (ENSDORG00000011726) #30	Bclaf1 (ENSDORG00000015144) #31	ENSDORG00000026911	Map7 (ENSDORG00000011587) #32	ENSDORG00000001559 #33	Pex7 (ENSDORG00000006036) #34	Slc35d3 (ENSDORG00000006037) #35	Il20ra (ENSDORG00000006038) #36
Lagomorpha	ANCESTRAL SPECIES	34	ENSGT01000000214440.A.a.b.b	ENSGT00940000162919	ENSGT00940000161306	ENSGT00940000160008	ENSGT00940000161258	ENSGT00940000162730	ENSGT00940000163260	ENSGT00390000013823.b.c.a.a	ENSGT00940000161475	ENSGT00950000182934.a.b	ENSGT00390000013823.b.c.a.b	ENSGT00940000156674	ENSGT00390000018318.u.a	ENSGT00950000182978.A.a.a	ENSGT00940000160174 #21	ENSGT00940000155712 #22	ENSGT00940000159614 #23	ENSGT00940000155726 #24	ENSGT00940000156799 #25	ENSGT00940000156274 #26	ENSGT00940000156248 #27	ENSGT00940000156509 #28	ENSGT00940000159413 #29	ENSGT00950000183215.c.a.a #30	ENSGT00950000183163.a.b #31	ENSGT00950000182941.a.a.a #32	ENSGT00940000159155 #33	ENSGT00940000157264 #34	ENSGT00940000160083 #35	ENSGT00940000157314.A #36	ENSGT00940000161124 #37
Pika	MODERN SPECIES	7146																TBPL1 (ENSOPRG00000017268) #22
Rabbit	MODERN SPECIES	3	ENSOCUG00000027175	ENSOCUG00000010942	TAAR6 (ENSOCUG00000035721)	ENSOCUG00000013335	TAAR5 (ENSOCUG00000017661)	ENSOCUG00000024372	ENSOCUG00000026295	TAAR2 (ENSOCUG00000007584)	TAAR1 (ENSOCUG00000017485)	ENSOCUG00000002119	SLC18B1 (ENSOCUG00000001601)	ENSOCUG00000001606	EYA4 (ENSOCUG00000000635)	ENSOCUG00000034819	TCF21 (ENSOCUG00000017761) #21	ENSOCUG00000007091 #22	SLC2A12 (ENSOCUG00000007095) #23	SGK1 (ENSOCUG00000014367) #24	ALDH8A1 (ENSOCUG00000011613) #25	ENSOCUG00000011619	MYB (ENSOCUG00000011633) #27	AHI1 (ENSOCUG00000011645) #28	PDE7B (ENSOCUG00000016632) #29	MTFR2 (ENSOCUG00000023560) #30	BCLAF1 (ENSOCUG00000016363) #31	MAP7 (ENSOCUG00000025456) #32	MAP3K5 (ENSOCUG00000015434) #33	PEX7 (ENSOCUG00000005413) #34	SLC35D3 (ENSOCUG00000005418) #35	IL20RA (ENSOCUG00000015696) #36	IL22RA2 (ENSOCUG00000022021) #37